-- dump date 20140620_032303 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 243090000001 SEQ_END SEQ_END NC_005027.1 7145576 7145576 DR NC_005027.1; contig end 7145576..7145576 Rhodopirellula baltica SH 1 NP_863660.1 CDS RB2 NC_005027.1 3 182 R signal peptide complement(3..182) Rhodopirellula baltica SH 1 1797122 NP_863661.1 CDS RB3 NC_005027.1 39 260 D signal peptide 39..260 Rhodopirellula baltica SH 1 1797135 NP_863662.1 CDS RB5 NC_005027.1 399 1514 R signal peptide complement(399..1514) Rhodopirellula baltica SH 1 1796079 NP_863663.1 CDS RB7 NC_005027.1 1548 1706 D hypothetical protein 1548..1706 Rhodopirellula baltica SH 1 1796479 NP_863664.1 CDS RB8 NC_005027.1 1733 5263 R best DB hits: BLAST: pir:D83545; probable helicase PA0799 [imported] - Pseudomonas; E=7e-95 embl:CAA67095.1; (X98455) SNF [Bacillus cereus]; E=8e-94 pir:C72027; swisnf family helicase_2 - Chlamydophila pneumoniae; E=4e-87 COG: PA0799; COG0553 Superfamily II DNA/RNA helicases, SNF2 family; E=7e-96 PFAM: PF02803; Thiolase, C-terminal domain; E=0.11 PF00176; SNF2 and others N-terminal domain; E=3.9e-64 PF00271; Helicase conserved C-terminal doma; E=1.2e-24; helicase complement(1733..5263) Rhodopirellula baltica SH 1 1797090 NP_863665.1 CDS RB13 NC_005027.1 5458 5850 R hypothetical protein complement(5458..5850) Rhodopirellula baltica SH 1 1793489 NP_863666.1 CDS RB14 NC_005027.1 5836 7386 D hypothetical protein 5836..7386 Rhodopirellula baltica SH 1 1794072 NP_863667.1 CDS RB16 NC_005027.1 7575 8069 R hypothetical protein complement(7575..8069) Rhodopirellula baltica SH 1 1791795 NP_863668.1 CDS RB17 NC_005027.1 7757 8251 R hypothetical protein complement(7757..8251) Rhodopirellula baltica SH 1 1796778 NP_863669.1 CDS RB18 NC_005027.1 7939 8433 R hypothetical protein complement(7939..8433) Rhodopirellula baltica SH 1 1792679 NP_863670.1 CDS RB19 NC_005027.1 8303 8542 R hypothetical protein complement(8303..8542) Rhodopirellula baltica SH 1 1791988 NP_863671.1 CDS RB20 NC_005027.1 8570 10894 R PMID: 2506434 best DB hits: BLAST: pir:B32491; myosin heavy chain 2, muscle - fruit fly (Drosophila; E=3e-09 pir:A32491; myosin heavy chain 1, muscle - fruit fly (Drosophila; E=3e-09 swissprot:P05661; MYSA_DROME MYOSIN HEAVY CHAIN, MUSCLE; E=4e-09 COG: VNG0342G; COG1196 Chromosome segregation ATPases; E=5e-05 aefA; COG3264 Small-conductance mechanosensitive channel; E=9e-04 Ta0787; COG1196 Chromosome segregation ATPases; E=0.002 PFAM: PF00038; Intermediate filament protein; E=0.87; hypothetical protein complement(8570..10894) Rhodopirellula baltica SH 1 1795238 NP_863672.1 CDS RB24 NC_005027.1 11131 13935 D best DB hits: BLAST: pir:F75417; L-sorbosone dehydrogenase - Deinococcus radiodurans; E=0.13 embl:CAB94635.1; (AL359215) secreted glycosyl hydrolase.; E=0.26 PFAM: PF00034; Cytochrome c; E=0.35; L-sorbosone dehydrogenase 11131..13935 Rhodopirellula baltica SH 1 1792188 NP_863673.1 CDS RB27 NC_005027.1 14053 14556 D hypothetical protein 14053..14556 Rhodopirellula baltica SH 1 1793901 NP_863674.1 CDS RB29 NC_005027.1 14498 15148 R hypothetical protein complement(14498..15148) Rhodopirellula baltica SH 1 1790242 NP_863675.1 CDS RB33 NC_005027.1 15460 15627 R hypothetical protein complement(15460..15627) Rhodopirellula baltica SH 1 1796933 NP_863676.1 CDS RB34 NC_005027.1 15692 16483 R hypothetical protein complement(15692..16483) Rhodopirellula baltica SH 1 1792112 NP_863677.1 CDS RB35 NC_005027.1 16591 17700 R hypothetical protein complement(16591..17700) Rhodopirellula baltica SH 1 1796477 NP_863678.1 CDS RB36 NC_005027.1 17693 17839 R hypothetical protein complement(17693..17839) Rhodopirellula baltica SH 1 1792703 NP_863679.1 CDS RB37 NC_005027.1 17846 18328 R signal peptide complement(17846..18328) Rhodopirellula baltica SH 1 1795873 NP_863680.1 CDS RB38 NC_005027.1 18331 18636 D hypothetical protein 18331..18636 Rhodopirellula baltica SH 1 1796519 NP_863681.1 CDS RB39 NC_005027.1 18668 19417 R PMID: 2820936 best DB hits: BLAST: pir:S46409; hypothetical protein - Aeromonas salmonicida -----; E=2e-29 embl:CAA05973.1; (AJ003194) transposase [Lactobacillus casei]; E=2e-27 swissprot:P37247; TRA4_BACFR TRANSPOSASE FOR INSERTION SEQUENCE; E=2e-26 COG: NMB0225; COG2826 Transposase, IS30 family; E=3e-27 PFAM: PF00665; Integrase core domain; E=2.4e-16; transposase complement(18668..19417) Rhodopirellula baltica SH 1 1790664 NP_863682.1 CDS RB40 NC_005027.1 19461 19922 R hypothetical protein complement(19461..19922) Rhodopirellula baltica SH 1 1791099 NP_863683.1 CDS RB41 NC_005027.1 20053 20550 R hypothetical protein complement(20053..20550) Rhodopirellula baltica SH 1 1793422 NP_863684.1 CDS RB43 NC_005027.1 20627 20791 R hypothetical protein complement(20627..20791) Rhodopirellula baltica SH 1 1790001 NP_863685.1 CDS RB44 NC_005027.1 20825 21127 R hypothetical protein complement(20825..21127) Rhodopirellula baltica SH 1 1795968 NP_863686.1 CDS RB45 NC_005027.1 21151 21471 R hypothetical protein complement(21151..21471) Rhodopirellula baltica SH 1 1796283 NP_863687.1 CDS RB46 NC_005027.1 21455 22282 R hypothetical protein complement(21455..22282) Rhodopirellula baltica SH 1 1796277 NP_863688.1 CDS RB50 NC_005027.1 22495 23190 R hypothetical protein complement(22495..23190) Rhodopirellula baltica SH 1 1794224 NP_863689.1 CDS RB52 NC_005027.1 23323 23670 R hypothetical protein complement(23323..23670) Rhodopirellula baltica SH 1 1791614 NP_863690.1 CDS RB54 NC_005027.1 23873 24472 R signal peptide complement(23873..24472) Rhodopirellula baltica SH 1 1793032 NP_863691.1 CDS RB56 NC_005027.1 24564 24833 R hypothetical protein complement(24564..24833) Rhodopirellula baltica SH 1 1797134 NP_863692.1 CDS RB59 NC_005027.1 24939 25208 R hypothetical protein complement(24939..25208) Rhodopirellula baltica SH 1 1789905 NP_863693.1 CDS RB60 NC_005027.1 25165 25359 D hypothetical protein 25165..25359 Rhodopirellula baltica SH 1 1794111 NP_863694.1 CDS RB61 NC_005027.1 25378 25554 D hypothetical protein 25378..25554 Rhodopirellula baltica SH 1 1795806 NP_863695.1 CDS RB62 NC_005027.1 25588 25983 D hypothetical protein 25588..25983 Rhodopirellula baltica SH 1 1792502 NP_863696.1 CDS RB66 NC_005027.1 26082 26336 D hypothetical protein 26082..26336 Rhodopirellula baltica SH 1 1793639 NP_863697.1 CDS RB68 NC_005027.1 26435 27682 D signal peptide 26435..27682 Rhodopirellula baltica SH 1 1795819 NP_863698.1 CDS RB71 NC_005027.1 27689 28141 D signal peptide 27689..28141 Rhodopirellula baltica SH 1 1792356 NP_863699.1 CDS RB72 NC_005027.1 28138 28674 D signal peptide 28138..28674 Rhodopirellula baltica SH 1 1795967 NP_863700.1 CDS RB73 NC_005027.1 28727 29023 D hypothetical protein 28727..29023 Rhodopirellula baltica SH 1 1795918 NP_863701.1 CDS RB76 NC_005027.1 29164 29736 D signal peptide 29164..29736 Rhodopirellula baltica SH 1 1792371 NP_863702.1 CDS RB77 NC_005027.1 29168 29692 D hypothetical protein 29168..29692 Rhodopirellula baltica SH 1 1795532 NP_863703.1 CDS RB80 NC_005027.1 29767 30276 D hypothetical protein 29767..30276 Rhodopirellula baltica SH 1 1791184 NP_863704.1 CDS RB81 NC_005027.1 30279 30440 D hypothetical protein 30279..30440 Rhodopirellula baltica SH 1 1793296 NP_863705.1 CDS RB82 NC_005027.1 30494 31135 D PMID: 10192928 best DB hits: BLAST: ddbj:BAB04609.1; (AP001510) BH0890~unknown conserved protein in; E=2e-31 embl:CAB95973.1; (AL360034) hypothetical protein 2SCG4.02c; E=2e-25 pir:A70710; hypothetical protein Rv0790c - Mycobacterium; E=1e-05 COG: BH0890; COG1305 transglutaminases, cysteine; E=2e-32 PFAM: PF01841; Transglutaminase-like superfam; E=0.42; cysteine protease 30494..31135 Rhodopirellula baltica SH 1 1795445 NP_863706.1 CDS RB84 NC_005027.1 31291 31473 R hypothetical protein complement(31291..31473) Rhodopirellula baltica SH 1 1796014 NP_863707.1 CDS RB85 NC_005027.1 31507 32739 D PMID: 11823852 best DB hits: BLAST: pir:A83071; hypothetical protein PA4591 [imported] - Pseudomonas; E=0.044 swissprot:P50533; XCPE_XENLA CHROMOSOME ASSEMBLY PROTEIN XCAP-E; E=0.26 gb:AAF73831.1; AF183959_2 (AF183959) periplasmic linker protein; E=0.62 COG: PA4591; COG0845 Membrane-fusion protein; E=0.004; hypothetical protein 31507..32739 Rhodopirellula baltica SH 1 1790746 NP_863708.1 CDS RB87 NC_005027.1 32765 34051 D signal peptide 32765..34051 Rhodopirellula baltica SH 1 1792035 NP_863709.1 CDS phoD NC_005027.1 34254 35666 D PMID: 8760916 best DB hits: BLAST: embl:CAC18240.1; (AL451018) conserved hypothetical protein; E=2e-12 ddbj:BAB10478.1; (AB016888) gene_id:MDH9.6~similar to unknown; E=2e-12 embl:CAB92825.1; (AL356892) hypothetical protein [Streptomyces; E=6e-05; alkaline phosphatase 34254..35666 Rhodopirellula baltica SH 1 1795407 NP_863710.1 CDS RB89 NC_005027.1 35663 36370 D best DB hits: PFAM: PF00975; Thioesterase domain; E=0.51 PF00561; alpha/beta hydrolase fold; E=0.084; hypothetical protein 35663..36370 Rhodopirellula baltica SH 1 1796478 NP_863711.1 CDS phoD NC_005027.1 36400 38457 R PMID: 8760916 best DB hits: BLAST: pir:F83157; hypothetical protein PA3910 [imported] - Pseudomonas; E=6e-05 ddbj:BAA06483.1; (D30808) unknown [Bacillus subtilis]; E=1e-04 swissprot:P42251; PPBD_BACSU ALKALINE PHOSPHATASE D PRECURSOR; E=1e-04; alkaline phosphatase complement(36400..38457) Rhodopirellula baltica SH 1 1792218 NP_863712.1 CDS RB93 NC_005027.1 38470 39441 R signal peptide complement(38470..39441) Rhodopirellula baltica SH 1 1794710 NP_863713.1 CDS RB95 NC_005027.1 39617 40090 R hypothetical protein complement(39617..40090) Rhodopirellula baltica SH 1 1796866 NP_863714.1 CDS RB98 NC_005027.1 40275 40571 R PMID: 9679194 PMID: 2546769 best DB hits: BLAST: pir:E75218; lsu ribosomal protein l37ae (rpl37ae) PAB7067 -; E=0.14 swissprot:O74106; R37A_PYRHO 50S RIBOSOMAL PROTEIN L37AE -----; E=0.30; 50S ribosomal protein L37 complement(40275..40571) Rhodopirellula baltica SH 1 1796533 NP_863715.1 CDS RB100 NC_005027.1 40726 41097 R hypothetical protein complement(40726..41097) Rhodopirellula baltica SH 1 1796505 NP_863716.1 CDS RB101 NC_005027.1 41251 44415 R PMID: 2691504 best DB hits: BLAST: pir:H75007; probable acylaminoacyl-peptidase (EC 3.4.19.1) PAB1300; E=6e-18 pir:G82543; conserved hypothetical protein XF2551 [imported] - Xylella; E=1e-16 pir:C71137; hypothetical protein PH0863 - Pyrococcus horikoshii; E=7e-16 COG: PAB1300; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; E=5e-19 VNG2302G; COG1506 Dipeptidyl; E=2e-08 APE1832; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; E=3e-08 PFAM: PF01748; Domain of unknown function DUF3; E=0.37 PF00326; Prolyl oligopeptidase; E=0.042; acylaminoacyl peptidase complement(41251..44415) Rhodopirellula baltica SH 1 1790506 NP_863717.1 CDS RB104 NC_005027.1 44265 44834 R hypothetical protein complement(44265..44834) Rhodopirellula baltica SH 1 1794687 NP_863718.1 CDS RB105 NC_005027.1 44735 45886 D PMID: 9389475 PMID: 7548211 best DB hits: BLAST: gb:AAB89309.1; (AE000969) cysteine proteinase, ; E=8e-04 gb:AAG54838.1; AE005229_1 (AE005229) RTX family exoprotein; E=0.19 gb:AAD56325.1; AC009326_12 (AC009326) unknown protein [Arabidopsis; E=0.84; cysteine proteinase 44735..45886 Rhodopirellula baltica SH 1 1795114 NP_863719.1 CDS RB107 NC_005027.1 45883 47262 D PMID: 8921874 best DB hits: BLAST: pir:A58519; hypothetical 345 protein - Streptomyces coelicolor; E=0.14 pir:H69064; serinethreonine protein kinase related protein -; E=0.20 gb:AAG31169.1; (AF314961) unknown [Salmonella typhimurium]; E=0.64 PFAM: PF01011; PQQ enzyme repeat; E=0.2; hypothetical protein 45883..47262 Rhodopirellula baltica SH 1 1790824 NP_863720.1 CDS RB110 NC_005027.1 47345 49093 R PMID: 8244397 PMID: 8325651 best DB hits: BLAST: gb:AAA16877.1; (L13329) iduronate-2-sulfatase [Homo sapiens]; E=3e-58 gb:AAB33747.1; iduronate-2-sulfatase, IDS {EC 3.1.6.13} [human,; E=1e-57 gb:AAA37880.1; (L07921) iduronate sulfatase [Mus musculus]; E=1e-54 COG: PA0031; COG3119 Arylsulfatase A and related enzymes; E=2e-36 BS_yqgS; COG1368 Phosphoglycerol transferase and related proteins,; E=1e-06 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=1e-06 PFAM: PF00884; Sulfatase; E=1.7e-28; iduronate-2-sulfatase complement(47345..49093) Rhodopirellula baltica SH 1 1795996 NP_863721.1 CDS RB112 NC_005027.1 49329 50216 R hypothetical protein complement(49329..50216) Rhodopirellula baltica SH 1 1795268 NP_863722.1 CDS RB115 NC_005027.1 50213 51139 R best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide complement(50213..51139) Rhodopirellula baltica SH 1 1796930 NP_863723.1 CDS RB117 NC_005027.1 51136 51525 R hypothetical protein complement(51136..51525) Rhodopirellula baltica SH 1 1793986 NP_863724.1 CDS RB118 NC_005027.1 51522 52031 R hypothetical protein complement(51522..52031) Rhodopirellula baltica SH 1 1796245 NP_863725.1 CDS RB120 NC_005027.1 52007 52390 R hypothetical protein complement(52007..52390) Rhodopirellula baltica SH 1 1796776 NP_863726.1 CDS RB123 NC_005027.1 52395 53687 R PMID: 1738317; hypothetical protein complement(52395..53687) Rhodopirellula baltica SH 1 1793238 NP_863727.1 CDS RB125 NC_005027.1 53678 54571 R hypothetical protein complement(53678..54571) Rhodopirellula baltica SH 1 1796000 NP_863728.1 CDS RB127 NC_005027.1 54487 55539 R hypothetical protein complement(54487..55539) Rhodopirellula baltica SH 1 1794977 NP_863729.1 CDS gspE NC_005027.1 55536 56747 R PMID: 1588814 best DB hits: BLAST: pir:C75333; general secretion pathway protein E - Deinococcus; E=1e-44 swissprot:P37093; GSPE_VIBCH GENERAL SECRETION PATHWAY PROTEIN E; E=6e-44 pir:C83313; probable type II secretion protein PA2677 [imported] -; E=3e-43 COG: DR1964; COG2804 Predicted ATPases involved in pili biogenesis, PilB; E=1e-45 PFAM: PF00437; Bacterial type II secretion s; E=5.5e-12 PF00448; SRP54-type protein, GTPase do; E=0.15 PF00437; Bacterial type II secretion s; E=5.5e-52; general secretion pathway protein E complement(55536..56747) Rhodopirellula baltica SH 1 1794075 NP_863730.1 CDS RB129 NC_005027.1 56777 56890 R hypothetical protein complement(56777..56890) Rhodopirellula baltica SH 1 1791120 NP_863731.1 CDS RB130 NC_005027.1 56878 58119 D signal peptide 56878..58119 Rhodopirellula baltica SH 1 1796566 NP_863732.1 CDS RB132 NC_005027.1 58394 58615 R hypothetical protein complement(58394..58615) Rhodopirellula baltica SH 1 1790942 NP_863733.1 CDS RB133 NC_005027.1 58617 59468 R PMID: 10984043 best DB hits: BLAST: pir:G83056; conserved hypothetical protein PA4717 [imported] -; E=1e-59 pir:B65023; hypothetical protein b2475 - Escherichia coli (strain; E=4e-59 gb:AAK04057.1; (AE006233) unknown [Pasteurella multocida]; E=8e-57 COG: PA4717; COG2321 Predicted metalloprotease; E=1e-60; metalloprotease complement(58617..59468) Rhodopirellula baltica SH 1 1791164 NP_863734.1 CDS RB135 NC_005027.1 59440 59604 R hypothetical protein complement(59440..59604) Rhodopirellula baltica SH 1 1795629 NP_863735.1 CDS RB136 NC_005027.1 59847 60875 D PMID: 10493123 best DB hits: BLAST: pir:H75528; conserved hypothetical protein - Deinococcus radiodurans; E=4e-06 pir:S76507; hypothetical protein - Synechocystis sp. (strain PCC; E=7e-06 pir:D81837; hypothetical protein NMA1464 [imported] - Neisseria; E=1e-05 COG: DR0358; COG0354 Predicted aminomethyltransferase related to GcvT; E=4e-07; glycine cleavage system protein T 59847..60875 Rhodopirellula baltica SH 1 1796034 NP_863736.1 CDS RB138 NC_005027.1 60872 61516 D hypothetical protein 60872..61516 Rhodopirellula baltica SH 1 1793669 NP_863737.1 CDS RB140 NC_005027.1 61578 64541 D best DB hits: BLAST: swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=2e-31 pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=5e-31 swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=9e-31 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=3e-32 PFAM: PF00069; Protein kinase domain; E=6.9e-49 PF00515; TPR Domain; E=0.72; serine/threonine protein kinase 61578..64541 Rhodopirellula baltica SH 1 1790591 NP_863738.1 CDS RB142 NC_005027.1 64669 66924 R best DB hits: PFAM: PF00364; Biotin-requiring enzyme; E=0.031 PF00529; HlyD family secretion protein; E=0.78; hypothetical protein complement(64669..66924) Rhodopirellula baltica SH 1 1795845 NP_863739.1 CDS RB144 NC_005027.1 66870 68273 R best DB hits: BLAST: pir:T31342; ragD protein - Bradyrhizobium japonicum ----- embl:; E=1e-05 pir:B83186; probable RND efflux membrane fusion protein precursor; E=2e-04 gb:AAK03081.1; (AE006139) unknown [Pasteurella multocida]; E=0.001 COG: PA3677; COG0845 Membrane-fusion protein; E=2e-05 PA2836; COG1566 Multidrug resistance efflux pump; E=0.001 VC0165; COG0845 Membrane-fusion protein; E=0.002 PFAM: PF00364; Biotin-requiring enzyme; E=0.021; membrane-fusion protein complement(66870..68273) Rhodopirellula baltica SH 1 1792442 NP_863740.1 CDS RB146 NC_005027.1 68277 69164 R PMID: 8203018 best DB hits: BLAST: pir:C70415; cation efflux system (czcB-like) - Aquifex aeolicus; E=2e-10 pir:B82357; conserved hypothetical protein VC0165 [imported] -; E=3e-10 ddbj:BAA34299.1; (AB015853) MexX [Pseudomonas aeruginosa]; E=5e-08 COG: aq_1331; COG0845 Membrane-fusion protein; E=2e-11 emrA; COG1566 Multidrug resistance efflux pump; E=0.003 PA3402; COG0845 Membrane-fusion protein; E=0.003 PFAM: PF00364; Biotin-requiring enzyme; E=0.0052 PF00529; HlyD family secretion protein; E=6.1e-07; cation efflux system complement(68277..69164) Rhodopirellula baltica SH 1 1796294 NP_863741.1 CDS secA NC_005027.1 69161 71212 R functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA complement(69161..71212) Rhodopirellula baltica SH 1 1795654 NP_863742.1 CDS RB149 NC_005027.1 71197 73215 R PMID: 9852029 best DB hits: BLAST: gb:AAD12177.1; (AF029405) outer membrane channel protein; E=0.001 gb:AAD30205.1; (AF094824) IbeB [Escherichia coli]; E=0.039 swissprot:Q51487; OPRM_PSEAE OUTER MEMBRANE PROTEIN OPRM PRECURSOR; E=0.049 COG: PA0427; COG1538 Outer membrane protein; E=0.005 PFAM: PF02321; Outer membrane efflux protein; E=0.0013; outer membrane channel protein complement(71197..73215) Rhodopirellula baltica SH 1 1793115 NP_863743.1 CDS RB150 NC_005027.1 73100 73390 D hypothetical protein 73100..73390 Rhodopirellula baltica SH 1 1795998 NP_863744.1 CDS RB152 NC_005027.1 73233 73403 D hypothetical protein 73233..73403 Rhodopirellula baltica SH 1 1790021 NP_863745.1 CDS RB154 NC_005027.1 73499 81046 D PMID: 6091915 best DB hits: BLAST: pir:S75200; fat protein - Synechocystis sp. (strain PCC 6803) -----; E=7e-24 ddbj:BAA88688.1; (AB011533) MEGF7 [Rattus norvegicus]; E=3e-18 ddbj:BAA32468.1; (AB011540) MEGF7 [Homo sapiens]; E=2e-17 COG: sll0656_1; COG3204 Uncharacterized BCR; E=5e-14 PFAM: PF00058; Low-density lipoprotein receptor; E=6.3e-06 PF00028; Cadherin domain; E=0.036 PF00801; PKD domain; E=0.073; lipoprotein receptor-related protein 73499..81046 Rhodopirellula baltica SH 1 1793983 NP_863746.1 CDS RB159 NC_005027.1 81043 84024 D PMID: 11406410 best DB hits: BLAST: pir:S75136; sensory transduction histidine kinase slr2104 -; E=2e-69 pir:S75130; sensory transduction histidine kinase slr2098 -; E=4e-63 pir:E83443; probable sensorresponse regulator hybrid PA1611; E=8e-62 COG: VC1349_2; COG0642 Sensory transduction histidine kinases; E=2e-53 PFAM: PF00989; PAS domain; E=5.9e-05 PF00512; His Kinase A (phosphoacceptor); E=4.2e-24 PF02518; Histidine kinase-, DNA gyrase B; E=4.1e-43; sensory transduction histidine kinase 81043..84024 Rhodopirellula baltica SH 1 1795400 NP_863747.1 CDS RB160 NC_005027.1 84027 84284 R hypothetical protein complement(84027..84284) Rhodopirellula baltica SH 1 1796534 NP_863748.1 CDS RB161 NC_005027.1 84262 85518 D PMID: 7699720 best DB hits: BLAST: pir:G82211; response regulator VC1348 [imported] - Vibrio cholerae; E=4e-59 embl:CAB89843.1; (AJ251547) response regulator [Xanthomonas; E=2e-56 pir:S75132; sensory transduction system regulatory protein slr2100 -; E=1e-55 COG: VC1348_2; COG2206 HD-GYP domain; E=1e-42 PFAM: PF00072; Response regulator receiver doma; E=1.1e-29 PF01966; HD domain; E=0.003; response regulator 84262..85518 Rhodopirellula baltica SH 1 1793894 NP_863749.1 CDS RB162 NC_005027.1 85677 86603 R best DB hits: BLAST: pir:F81675; conserved hypothetical protein TC0684 [imported] -; E=7e-30 pir:D72066; sam dependent methyltransferase - Chlamydophila; E=1e-27 pir:G71519; probable sam dependent methyltransferase - Chlamydia; E=3e-27 COG: CPn0531; COG1092 Predicted SAM-dependent methyltransferases; E=1e-28; SAM dependent methyltransferase complement(85677..86603) Rhodopirellula baltica SH 1 1797127 NP_863750.1 CDS RB164 NC_005027.1 87060 87560 D hypothetical protein 87060..87560 Rhodopirellula baltica SH 1 1792649 NP_863751.1 CDS RB165 NC_005027.1 87557 88726 R best DB hits: BLAST: gb:AAB58155.1; (U82621) hypothetical protein [Shigella flexneri]; E=2e-33 gb:AAF09022.1; (AF139596) unknown [Shigella flexneri]; E=2e-33 gb:AAG55688.1; AE005307_6 (AE005307) unknown in IS600 [Escherichia; E=2e-33 COG: tra5_g4; COG2801 transposase; E=2e-27 PFAM: PF01527; Transposase; E=4.8e-13 PF00665; Integrase core domain; E=3e-39; transposase complement(87557..88726) Rhodopirellula baltica SH 1 1792141 NP_863752.1 CDS RB166 NC_005027.1 88683 88847 D hypothetical protein 88683..88847 Rhodopirellula baltica SH 1 1790407 NP_863753.1 CDS RB168 NC_005027.1 88901 89317 D PMID: 8041625 best DB hits: BLAST: gb:AAB07489.2; (U66426) transposase [Acidithiobacillus; E=1e-21 gb:AAF60967.1; AF188737_2 (AF188737) transposase [Escherichia; E=1e-20 pir:A47041; probable transposase - Alcaligenes eutrophus insertion; E=1e-09 PFAM: PF01610; Transposase; E=3.9e-09; transposase 88901..89317 Rhodopirellula baltica SH 1 1792187 NP_863754.1 CDS RB170 NC_005027.1 89333 89623 D PMID: 2824781 best DB hits: BLAST: gb:AAG58100.1; AE005527_3 (AE005527) unknown protein encoded by; E=0.002 gb:AAG53987.1; AF327445_1 (AF327445) transposase A; E=0.003 gb:AAF28119.1; AF153317_15 (AF153317) InsA [Shigella; E=0.007 COG: PA1937; COG2963 Transposase; E=0.004 PFAM: PF01381; Helix-turn-helix; E=0.53 PF01527; Transposase; E=6.1e-18; transposase 89333..89623 Rhodopirellula baltica SH 1 1794529 NP_863755.1 CDS RB171 NC_005027.1 89626 90504 D best DB hits: BLAST: gb:AAA88919.1; (U13013) ORFB [Leptospira interrogans]; E=3e-47 gb:AAA88916.1; (U13012) ORFB [Leptospira interrogans]; E=1e-46 gb:AAC05649.1; (AF038931) probable transposase-related protein; E=1e-45 COG: DRB0019.2; COG2801 transposase; E=1e-35 PFAM: PF00665; Integrase core domain; E=4.8e-40; transposase 89626..90504 Rhodopirellula baltica SH 1 1790646 NP_863756.1 CDS RB172 NC_005027.1 90494 91441 D PMID: 10601203 best DB hits: BLAST: gb:AAF60967.1; AF188737_2 (AF188737) transposase [Escherichia; E=6e-41 gb:AAB07489.2; (U66426) transposase [Acidithiobacillus; E=1e-30 pir:A47041; probable transposase - Alcaligenes eutrophus insertion; E=4e-26 PFAM: PF01610; Transposase; E=4.2e-28; transposase 90494..91441 Rhodopirellula baltica SH 1 1792461 NP_863757.1 CDS RB174 NC_005027.1 91448 91585 D hypothetical protein 91448..91585 Rhodopirellula baltica SH 1 1790223 NP_863758.1 CDS RB175 NC_005027.1 91582 91956 D hypothetical protein 91582..91956 Rhodopirellula baltica SH 1 1790363 NP_863759.1 CDS RB177 NC_005027.1 92068 92493 R PMID: 12024217; signal peptide complement(92068..92493) Rhodopirellula baltica SH 1 1796138 NP_863760.1 CDS RB180 NC_005027.1 92655 93002 R hypothetical protein complement(92655..93002) Rhodopirellula baltica SH 1 1795105 NP_863761.1 CDS RB182 NC_005027.1 93120 93563 R hypothetical protein complement(93120..93563) Rhodopirellula baltica SH 1 1794332 NP_863762.1 CDS RB183 NC_005027.1 93532 95316 R PMID: 12093901 best DB hits: BLAST: gb:AAD51069.1; AF175716_1 (AF175716) immunoreactive 52kD antigen; E=0.045 pir:S75812; hypothetical protein slr1270 - Synechocystis sp. (strain; E=0.17 PFAM: PF02321; Outer membrane efflux protein; E=0.18; hypothetical protein complement(93532..95316) Rhodopirellula baltica SH 1 1795618 NP_863763.1 CDS RB185 NC_005027.1 94207 94812 D hypothetical protein 94207..94812 Rhodopirellula baltica SH 1 1791706 NP_863764.1 CDS RB187 NC_005027.1 95367 95474 R hypothetical protein complement(95367..95474) Rhodopirellula baltica SH 1 1790207 NP_863765.1 CDS RB188 NC_005027.1 95487 96941 D best DB hits: BLAST: pir:T31342; ragD protein - Bradyrhizobium japonicum ----- embl:; E=2e-20 pir:A83330; probable RND efflux membrane fusion protein precursor; E=2e-12 pir:D83099; probable RND efflux membrane fusion protein precursor; E=2e-12 COG: PA2528; COG0845 Membrane-fusion protein; E=2e-13 PFAM: PF00364; Biotin-requiring enzyme; E=0.18 PF00529; HlyD family secretion protein; E=0.05; membrane-fusion protein 95487..96941 Rhodopirellula baltica SH 1 1791461 NP_863766.1 CDS RB191 NC_005027.1 96941 100087 D PMID: 8407802 best DB hits: BLAST: pir:S76433; cation efflux system protein czcA-2 - Synechocystis sp.; E=2e-86 ddbj:BAB07535.1; (AP001520) cation efflux system [Bacillus; E=1e-82 pir:F82263; probable multidrug resistance protein VC0914 [imported] -; E=1e-76 COG: sll0142; COG0841 Cation/multidrug efflux pump; E=1e-87 PFAM: PF00873; AcrB/AcrD/AcrF family; E=4.7e-88; AcrB/AcrD/AcrF family cation efflux protein 96941..100087 Rhodopirellula baltica SH 1 1794814 NP_863767.1 CDS RB192 NC_005027.1 100084 100254 R hypothetical protein complement(100084..100254) Rhodopirellula baltica SH 1 1796154 NP_863768.1 CDS RB193 NC_005027.1 100235 100909 R signal peptide complement(100235..100909) Rhodopirellula baltica SH 1 1794120 NP_863769.1 CDS oprO NC_005027.1 101008 102708 R PMID: 3017428 best DB hits: BLAST: pir:D82740; polyphosphate-selective porin O XF0975 [imported] -; E=2e-09 pir:A82820; porin O precursor XF0321 [imported] - Xylella fastidiosa; E=1e-04 swissprot:P05695; PORP_PSEAE PORIN P PRECURSOR (OUTER MEMBRANE; E=9e-04; polyphosphate-selective porin O complement(101008..102708) Rhodopirellula baltica SH 1 1792897 NP_863770.1 CDS RB197 NC_005027.1 102804 102965 D hypothetical protein 102804..102965 Rhodopirellula baltica SH 1 1790450 NP_863771.1 CDS RB198 NC_005027.1 102935 104761 R PMID: 2303452 best DB hits: BLAST: gb:AAF49302.1; (AE003522) CG5584 gene product [Drosophila; E=3e-35 gb:AAF49287.1; (AE003522) CG7402 gene product [Drosophila; E=2e-34 gb:AAF30402.1; AF109924_1 (AF109924) sulfatase 1 precursor [Helix; E=1e-33 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=6e-28 BS_yfnI; COG1368 Phosphoglycerol transferase and related proteins,; E=3e-07 VNG0061C; COG3119 Arylsulfatase A and related enzymes; E=2e-04 PFAM: PF00884; Sulfatase; E=1.5e-40; N-acetylgalactosamine-6-sulfatase complement(102935..104761) Rhodopirellula baltica SH 1 1791308 NP_863772.1 CDS RB200 NC_005027.1 104925 106544 R PMID: 10809675 best DB hits: BLAST: gb:AAF72520.1; AF248951_1 (AF248951) mucin-desulfating sulfatase; E=1e-83 gb:AAG58881.1; AE005599_13 (AE005599) sulfatase; E=3e-31 swissprot:P31447; YIDJ_ECOLI SULFATASE YIDJ -----; E=5e-31 COG: yidJ; COG3119 Arylsulfatase A and related enzymes; E=5e-32 yejM; COG3083 Predicted hydrolase of alkaline phosphatase; E=5e-05 HI1246; COG1368 Phosphoglycerol transferase and related proteins,; E=3e-04 PFAM: PF00884; Sulfatase; E=1.8e-37; mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase) complement(104925..106544) Rhodopirellula baltica SH 1 1789967 NP_863773.1 CDS RB201 NC_005027.1 106781 107647 R best DB hits: BLAST: swissprot:Q9WYP7; Y416_THEMA HYPOTHETICAL PROTEIN TM0416 -----; E=4e-26 swissprot:O50580; DT3E_PSECI D-TAGATOSE 3-EPIMERASE -----; E=6e-13 swissprot:P73599; YD04_SYNY3 HYPOTHETICAL 32.8 KDA PROTEIN SLL1304; E=2e-12 COG: TM0416; COG1082 Predicted endonucleases; E=4e-27; sugar phosphate isomerase/epimerase complement(106781..107647) Rhodopirellula baltica SH 1 1794289 NP_863774.1 CDS RB202 NC_005027.1 107732 107884 R PMID: 3097517 best DB hits: BLAST: pir:A24420; notch protein - fruit fly (Drosophila melanogaster); E=0.11 swissprot:P07207; NOTC_DROME NEUROGENIC LOCUS NOTCH PROTEIN; E=0.11 embl:CAB37610.1; (AL035436) EG:140G11.1 [Drosophila melanogaster]; E=0.11; neurogenic locus Notch protein complement(107732..107884) Rhodopirellula baltica SH 1 1790726 NP_863775.1 CDS RB203 NC_005027.1 107922 108965 R PMID: 2498333 best DB hits: BLAST: pir:T04984; hypothetical protein T16L1.160 - Arabidopsis thaliana; E=3e-59 gb:AAF54729.1; (AE003694) CG18547 gene product [Drosophila; E=3e-44 gb:AAF54731.1; (AE003694) CG3397 gene product [Drosophila; E=4e-36 COG: YMR041c; COG0667 Predicted oxidoreductases (related to aryl-alcohol; E=9e-22 TM1183; COG1453 Predicted oxidoreductases of the aldo/keto reductase; E=1e-14 BS_yccK; COG0667 Predicted oxidoreductases (related to aryl-alcohol; E=2e-14 PFAM: PF00248; Aldo/keto reductase; E=1.3e-14; oxidoreductase complement(107922..108965) Rhodopirellula baltica SH 1 1793918 NP_863776.1 CDS RB206 NC_005027.1 109144 109251 R signal peptide complement(109144..109251) Rhodopirellula baltica SH 1 1793409 NP_863777.1 CDS RB207 NC_005027.1 109385 111136 R PMID: 11930014 best DB hits: BLAST: pir:S44243; endosomal protein - human ----- embl: CAA55632.1; E=0.71 gb:AAA79121.1; (L40157) endosome-associated protein [Homo; E=0.73 swissprot:P02566; MYSB_CAEEL MYOSIN HEAVY CHAIN B (MHC B) -----; E=0.82 PFAM: PF01882; Protein of unknown function DUF58; E=0.11; endosomal protein complement(109385..111136) Rhodopirellula baltica SH 1 1796979 NP_863778.1 CDS RB210 NC_005027.1 111133 112158 R hypothetical protein complement(111133..112158) Rhodopirellula baltica SH 1 1795379 NP_863779.1 CDS RB213 NC_005027.1 112302 115646 D signal peptide 112302..115646 Rhodopirellula baltica SH 1 1796115 NP_863780.1 CDS RB218 NC_005027.1 115765 117177 D PMID: 11743194; hypothetical protein 115765..117177 Rhodopirellula baltica SH 1 1795410 NP_863781.1 CDS RB220 NC_005027.1 117170 118141 D signal peptide 117170..118141 Rhodopirellula baltica SH 1 1790589 NP_863782.1 CDS RB222 NC_005027.1 118214 118324 R hypothetical protein complement(118214..118324) Rhodopirellula baltica SH 1 1795803 NP_863783.1 CDS RB223 NC_005027.1 118401 120395 R PMID: 10438791 best DB hits: BLAST: ddbj:BAB07649.1; (AP001520) BH3930~unknown conserved protein in; E=1e-170 swissprot:Q9Z8L0; Y328_CHLPN HYPOTHETICAL PROTEIN; E=1e-86 swissprot:O84087; Y085_CHLTR HYPOTHETICAL PROTEIN CT085 -----; E=3e-86 COG: BH3930; COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and; E=1e-171 PFAM: PF01977; Protein of unknown function UPF0096; E=6.7e-19; 4-hydroxybenzoate decarboxylase complement(118401..120395) Rhodopirellula baltica SH 1 1796939 NP_863784.1 CDS RB226 NC_005027.1 120568 120834 R hypothetical protein complement(120568..120834) Rhodopirellula baltica SH 1 1795797 NP_863785.1 CDS RB227 NC_005027.1 120858 121037 D hypothetical protein 120858..121037 Rhodopirellula baltica SH 1 1796019 NP_863786.1 CDS RB229 NC_005027.1 121025 122782 R signal peptide complement(121025..122782) Rhodopirellula baltica SH 1 1794912 NP_863787.1 CDS RB233 NC_005027.1 122781 123017 D hypothetical protein 122781..123017 Rhodopirellula baltica SH 1 1792428 NP_863788.1 CDS RB236 NC_005027.1 123018 124316 D best DB hits: BLAST: pir:S74628; hypothetical protein slr1772 - Synechocystis sp. (strain; E=6e-17 pir:E82406; probable hydrolase VCA0877 [imported] - Vibrio cholerae; E=4e-13 gb:AAF67801.1; AF148138_1 (AF148138) bile salt hydrolase; E=0.028 COG: slr1772; COG3049 Penicillin V acylase and related amidases; E=5e-18 PFAM: PF02275; Choloylglycine hydrolase; E=0.47; hydrolase 123018..124316 Rhodopirellula baltica SH 1 1794153 NP_863789.1 CDS RB241 NC_005027.1 124403 124546 D hypothetical protein 124403..124546 Rhodopirellula baltica SH 1 1796564 NP_863790.1 CDS RB244 NC_005027.1 124632 125636 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 124632..125636 Rhodopirellula baltica SH 1 1791890 NP_863791.1 CDS RB246 NC_005027.1 125688 126200 D best DB hits: PFAM: PF02369; Bacterial Ig-like domain (group 1); E=0.48; signal peptide 125688..126200 Rhodopirellula baltica SH 1 1796192 NP_863792.1 CDS RB248 NC_005027.1 126264 126458 R hypothetical protein complement(126264..126458) Rhodopirellula baltica SH 1 1792410 NP_863793.1 CDS RB249 NC_005027.1 126492 128021 R PMID: 10986268 best DB hits: BLAST: swissprot:P03835; YI41_ECOLI INSERTION ELEMENT IS4 HYPOTHETICAL; E=0.002 gb:AAC72261.1; (U91581) transposase [Lactococcus lactis; E=0.008 gb:AAF27554.1; (AF179847) transposase [Lactococcus; E=0.008 COG: yi41; COG3385 Predicted transposase; E=2e-04 PFAM: PF01609; Transposase (IS4 family); E=0.024; transposase complement(126492..128021) Rhodopirellula baltica SH 1 1795989 NP_863794.1 CDS RB250 NC_005027.1 127991 128251 D hypothetical protein 127991..128251 Rhodopirellula baltica SH 1 1795068 NP_863795.1 CDS hisS NC_005027.1 128316 129644 R PMID: 2991272 best DB hits: BLAST: swissprot:P56455; SYH_HELPY HISTIDYL-TRNA SYNTHETASE; E=5e-81 swissprot:Q9ZK27; SYH_HELPJ HISTIDYL-TRNA SYNTHETASE; E=1e-79 swissprot:O83647; SYH_TREPA HISTIDYL-TRNA SYNTHETASE; E=1e-73 COG: HP1190; COG0124 Histidyl-tRNA synthetase; E=5e-82 PFAM: PF00587; tRNA synthetase class II (G, H,; E=3.3e-08; histidyl-tRNA synthetase complement(128316..129644) Rhodopirellula baltica SH 1 1793487 NP_863796.1 CDS RB252 NC_005027.1 129759 130250 R hypothetical protein complement(129759..130250) Rhodopirellula baltica SH 1 1790280 NP_863797.1 CDS purU NC_005027.1 130316 131215 D PMID: 7868604 best DB hits: BLAST: gb:AAG20130.1; (AE005091) formyltetrahydrofolate deformylase; E=5e-24 swissprot:Q55135; PURU_SYNY3 FORMYLTETRAHYDROFOLATE DEFORMYLASE; E=3e-17 pir:C82633; formyltetrahydrofolate deformylase XF1831 [imported] -; E=2e-15 COG: VNG1946G; COG0788 Formyltetrahydrofolate hydrolase; E=5e-25 TM1248; COG0299 Folate-dependent phosphoribosylglycinamide; E=2e-07 Rv2964; COG0788 Formyltetrahydrofolate hydrolase; E=8e-07 PFAM: PF00551; Formyl transferase; E=1.4e-10; formyltetrahydrofolate deformylase 130316..131215 Rhodopirellula baltica SH 1 1796835 NP_863798.1 CDS RB257 NC_005027.1 131592 131813 R hypothetical protein complement(131592..131813) Rhodopirellula baltica SH 1 1794254 NP_863799.1 CDS RB259 NC_005027.1 131782 132336 R hypothetical protein complement(131782..132336) Rhodopirellula baltica SH 1 1795216 NP_863800.1 CDS RB262 NC_005027.1 132414 132683 D hypothetical protein 132414..132683 Rhodopirellula baltica SH 1 1796762 NP_863801.1 CDS rpsU NC_005027.1 132677 132871 D PMID: 11679669 best DB hits: BLAST: swissprot:P49225; RS21_MYXXA 30S RIBOSOMAL PROTEIN S21 -----; E=0.78 PFAM: PF01165; Ribosomal protein S21; E=2.9e-10; 30S ribosomal protein S21 132677..132871 Rhodopirellula baltica SH 1 1791067 NP_863802.1 CDS RB268 NC_005027.1 133252 133707 R best DB hits: BLAST: pir:H75286; hypothetical protein - Deinococcus radiodurans (strain; E=5e-11 COG: DR2326; COG2314 Predicted membrane protein; E=1e-11; hypothetical protein complement(133252..133707) Rhodopirellula baltica SH 1 1796605 NP_863803.1 CDS RB269 NC_005027.1 133878 134096 R hypothetical protein complement(133878..134096) Rhodopirellula baltica SH 1 1791358 NP_863804.1 CDS RB271 NC_005027.1 134068 134205 R hypothetical protein complement(134068..134205) Rhodopirellula baltica SH 1 1790491 NP_863805.1 CDS RB272 NC_005027.1 134180 134296 D hypothetical protein 134180..134296 Rhodopirellula baltica SH 1 1791525 NP_863806.1 CDS RB273 NC_005027.1 134462 135280 R best DB hits: BLAST: embl:CAB94634.1; (AL359215) secreted glycosyl hydrolase.; E=7e-08 pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=1e-07 embl:CAB45032.1; (AL078635) large multi-functional; E=0.002; secreted glycosyl hydrolase complement(134462..135280) Rhodopirellula baltica SH 1 1794255 NP_863807.1 CDS RB275 NC_005027.1 135370 135819 R hypothetical protein complement(135370..135819) Rhodopirellula baltica SH 1 1790929 NP_863808.1 CDS RB276 NC_005027.1 135460 135786 D hypothetical protein 135460..135786 Rhodopirellula baltica SH 1 1796948 NP_863809.1 CDS RB278 NC_005027.1 135837 138587 D hypothetical protein 135837..138587 Rhodopirellula baltica SH 1 1792397 NP_863810.1 CDS RB279 NC_005027.1 138584 139510 D best DB hits: BLAST: pir:S74476; ABC-type transport protein slr1113 - Synechocystis sp.; E=5e-49 pir:H71008; probable ATP-binding transport protein - Pyrococcus; E=8e-43 pir:S76626; ABC-type transport protein sll0489 - Synechocystis sp.; E=1e-42 COG: slr1113; COG1131 ABC-type multidrug transport system, ATPase; E=5e-50 yadG; COG1131 ABC-type multidrug transport system, ATPase component; E=1e-34 BH1054_2; COG0842 Permease component of an ABC-transporter; E=1e-34 PFAM: PF02223; Thymidylate kinase; E=0.064 PF00005; ABC transporter; E=2.4e-45; ABC transporter ATP-binding protein 138584..139510 Rhodopirellula baltica SH 1 1796975 NP_863811.1 CDS RB280 NC_005027.1 139488 139634 R hypothetical protein complement(139488..139634) Rhodopirellula baltica SH 1 1791579 NP_863812.1 CDS groS NC_005027.1 139597 139926 R PMID: 10206714 best DB hits: BLAST: gb:AAA83440.1; (U29483) GroES-like chaperonin [Thermus aquaticus]; E=5e-04 swissprot:P56970; CH10_CAMJE 10 KDA CHAPERONIN (PROTEIN CPN10); E=6e-04 swissprot:P26879; CH10_LEGPN 10 KD CHAPERONIN (PROTEIN CPN10); E=7e-04 COG: Cj1220; COG0234 Co-chaperonin GroES (HSP10); E=6e-05 PFAM: PF00166; Chaperonin 10 Kd subunit; E=4.5e-05; molecular chaperone GroES complement(139597..139926) Rhodopirellula baltica SH 1 1796528 NP_863813.1 CDS RB282 NC_005027.1 140047 141075 R best DB hits: BLAST: ddbj:BAB03825.1; (AP001507) BH0106~unknown conserved protein; E=2e-52 swissprot:Q06754; YACL_BACSU HYPOTHETICAL 40.9 KD PROTEIN IN; E=4e-51 swissprot:Q48762; YOR6_LISMO HYPOTHETICAL 39.5 KD PROTEIN (ORF6); E=8e-51 COG: BH0106; COG1855 ATPases of the PilT family; E=2e-53 PFAM: PF01850; PIN domain; E=0.11; ATPase complement(140047..141075) Rhodopirellula baltica SH 1 1796953 NP_863814.1 CDS RB283 NC_005027.1 140975 141220 R hypothetical protein complement(140975..141220) Rhodopirellula baltica SH 1 1796764 NP_863815.1 CDS dgt NC_005027.1 141290 142468 R PMID: 2826481 best DB hits: BLAST: gb:AAD53927.1; AF179611_11 (AF179611) dGTP triphosphohydrolase; E=5e-51 swissprot:Q9ZE82; DGTP_RICPR DEOXYGUANOSINETRIPHOSPHATE; E=3e-48 pir:F75449; dGTP triphosphohydrolase-related protein - Deinococcus; E=2e-47 COG: RP064; COG0232 dGTP triphosphohydrolase; E=3e-49 MJ1154; COG1078 HD superfamily phosphohydrolases; E=4e-04 PFAM: PF01966; HD domain; E=2.7e-10; dGTP triphosphohydrolase complement(141290..142468) Rhodopirellula baltica SH 1 1793789 NP_863816.1 CDS RB285 NC_005027.1 142498 142722 R hypothetical protein complement(142498..142722) Rhodopirellula baltica SH 1 1796929 NP_863817.1 CDS RB287 NC_005027.1 142776 143069 R hypothetical protein complement(142776..143069) Rhodopirellula baltica SH 1 1795130 NP_863818.1 CDS RB286 NC_005027.1 142779 143096 D hypothetical protein 142779..143096 Rhodopirellula baltica SH 1 1789928 NP_863819.1 CDS RB289 NC_005027.1 143024 143932 D best DB hits: BLAST: pir:G75191; dolichol-phosphate mannosyltransferase PAB2307 -; E=3e-21 pir:H71223; probable dolichol-phosphate mannosyltransferase -; E=3e-18 gb:AAC98797.1; (AF007875) dolichol monophosphate mannose synthase; E=5e-13 COG: PAB2307_1; COG0463 Glycosyltransferases involved in cell wall; E=3e-22 yfbF; COG0463 Glycosyltransferases involved in cell wall biogenesis; E=5e-12 MTH136; COG0463 Glycosyltransferases involved in cell wall; E=3e-11 PFAM: PF00535; Glycosyl transferase; E=1.1e-23; dolichol-phosphate mannosyltransferase 143024..143932 Rhodopirellula baltica SH 1 1796932 NP_863820.1 CDS RB291 NC_005027.1 143933 145348 D best DB hits: BLAST: gb:AAG20016.1; (AE005082) Vng1795c [Halobacterium sp. NRC-1]; E=2e-30 gb:AAB89520.1; (AE000983) A. fulgidus predicted coding region; E=2e-21 embl:CAB56041.1; (Y15115) zeta-carotene desaturase [Anabaena; E=4e-05 COG: VNG1795C; COG1232 Protoporphyrinogen oxidase; E=2e-31 slr0940; COG3349 Uncharacterized ACR; E=1e-04 PFAM: PF02254; KTN NAD-binding domain; E=0.00031 PF00070; Pyridine nucleotide-disulphide oxi; E=0.00077 PF01266; D-amino acid oxidase; E=0.11; hypothetical protein 143933..145348 Rhodopirellula baltica SH 1 1794860 NP_863821.1 CDS mobA NC_005027.1 145338 145973 D PMID: 11080634 PMID: 8020507 best DB hits: BLAST: gb:AAG45171.1; AF317883_3 (AF317883) molybdopterin cofactor; E=3e-05 pir:D70864; hypothetical protein Rv2453c - Mycobacterium; E=0.80; molybdopterin-guanine dinucleotide biosynthesis protein MobA 145338..145973 Rhodopirellula baltica SH 1 1796532 NP_863822.1 CDS moeA NC_005027.1 145984 147264 D PMID: 9515915 PMID: 3045084 best DB hits: BLAST: gb:AAG55200.1; AE005263_9 (AE005263) molybdopterin biosynthesis; E=7e-40 swissprot:P12281; MOEA_ECOLI MOLYBDOPTERIN BIOSYNTHESIS MOEA; E=3e-39 swissprot:Q44243; MOEA_ANASP MOLYBDOPTERIN BIOSYNTHESIS MOEA; E=4e-34 COG: moeA; COG0303 Molybdopterin biosynthesis enzyme; E=2e-40 PFAM: PF00994; Molybdenum cofactor biosynthesi; E=4.4e-76; molybdopterin biosynthesis protein MoeA 145984..147264 Rhodopirellula baltica SH 1 1796936 NP_863823.1 CDS RB296 NC_005027.1 147231 147404 R hypothetical protein complement(147231..147404) Rhodopirellula baltica SH 1 1795866 NP_863824.1 CDS amtB NC_005027.1 147355 148944 R best DB hits: BLAST: gb:AAK00343.1; AF329498_3 (AF329498) ammonium transporter AmtB; E=4e-82 gb:AAC38548.1; (AF005275) AmtB [Azospirillum brasilense]; E=3e-81 embl:CAA12410.1; (AJ225126) ammonium transporter, AmtB; E=4e-77 COG: PA5287; COG0004 Ammonia permeases; E=2e-76 PFAM: PF00909; Ammonium Transporter Family; E=1.5e-154; ammonium transporter complement(147355..148944) Rhodopirellula baltica SH 1 1790768 NP_863825.1 CDS RB298 NC_005027.1 148946 149146 R hypothetical protein complement(148946..149146) Rhodopirellula baltica SH 1 1790672 NP_863826.1 CDS htrA NC_005027.1 149063 150331 D PMID: 1645840 best DB hits: BLAST: gb:AAK02818.1; (AE006110) HtrA [Pasteurella multocida]; E=0.003 swissprot:P45129; HTOA_HAEIN PROBABLE PERIPLASMIC SERINE PROTEASE; E=0.010 gb:AAC38202.1; (AF018151) HtrA [Haemophilus influenzae]; E=0.010 COG: HI1259; COG0265 Trypsin-like serine proteases, typically; E=0.001 degQ; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=0.009 PFAM: PF00595; PDZ domain (Also known as DHR o; E=5e-11; serine protease HtrA 149063..150331 Rhodopirellula baltica SH 1 1795253 NP_863827.1 CDS mutY NC_005027.1 150470 151573 D PMID: 2197596 PMID: 9846876 best DB hits: BLAST: gb:AAG58092.1; AE005526_5 (AE005526) adenine glycosylase; G.C -->; E=2e-57 swissprot:P17802; MUTY_ECOLI AG-SPECIFIC ADENINE GLYCOSYLASE; E=3e-57 gb:AAK04939.1; AE006318_2 (AE006318) AG-specific adenine; E=2e-55 COG: mutY; COG1194 A/G-specific DNA glycosylase; E=3e-58 aq_282; COG0177 Predicted EndoIII-related endonuclease; E=2e-16 MTH496; COG1194 A/G-specific DNA glycosylase; E=3e-15 PFAM: PF00730; HhH-GPD superfamily base exci; E=4.5e-42; A/G-specific adenine glycosylase 150470..151573 Rhodopirellula baltica SH 1 1795090 NP_863828.1 CDS RB303 NC_005027.1 151630 151791 D hypothetical protein 151630..151791 Rhodopirellula baltica SH 1 1796751 NP_863829.1 CDS RB304 NC_005027.1 151755 153029 D best DB hits: BLAST: pir:B75584; cytochrome-c peroxidase (EC 1.11.1.5) DRA0301; E=2e-45 swissprot:Q49128; MAUG_METEX METHYLAMINE UTILIZATION PROTEIN MAUG; E=9e-45 swissprot:Q50426; MAUG_METFL METHYLAMINE UTILIZATION PROTEIN MAUG; E=2e-42 COG: DRA0301; COG1858 Cytochrome c peroxidase; E=2e-46; cytochrome-c peroxidase 151755..153029 Rhodopirellula baltica SH 1 1791860 NP_863830.1 CDS RB306 NC_005027.1 153262 153450 D hypothetical protein 153262..153450 Rhodopirellula baltica SH 1 1793141 NP_863831.1 CDS RB307 NC_005027.1 153443 154873 R PMID: 2644282 PMID: 36376 best DB hits: BLAST: swissprot:P16468; MAOX_BACST NAD-DEPENDENT MALIC ENZYME (NAD-ME); E=1e-141 embl:CAB72197.1; (AL138851) malate oxidoreductase; E=1e-135 pir:S74511; malic enzyme - Synechocystis sp. (strain PCC 6803); E=1e-118 COG: slr0721; COG0281 Malic enzyme; E=1e-119 PFAM: PF01842; ACT domain; E=7.3e-05 PF00390; Malic enzyme; E=0.034 PF01488; Shikimate / quinate 5-dehydrogen; E=0.17; NAD-dependent malic enzyme complement(153443..154873) Rhodopirellula baltica SH 1 1791477 NP_863832.1 CDS chlI NC_005027.1 154993 156441 R PMID: 8663186 best DB hits: BLAST: pir:G75255; probable magnesium protoporphyrin chelatase -; E=3e-84 pir:D70717; hypothetical protein Rv0958 - Mycobacterium tuberculosis; E=4e-69 gb:AAF82071.1; AF232750_3 (AF232750) Rv0958-like protein; E=2e-25 COG: DR2594; COG1239 Mg-chelatase subunit ChlI; E=2e-85 PFAM: PF01078; Magnesium chelatase, subunit Chl; E=1.1e-12; magnesium protoporphyrin chelatase complement(154993..156441) Rhodopirellula baltica SH 1 1795793 NP_863833.1 CDS RB313 NC_005027.1 156664 156945 R hypothetical protein complement(156664..156945) Rhodopirellula baltica SH 1 1795991 NP_863834.1 CDS fabD NC_005027.1 156968 157897 D PMID: 1339356 PMID: 7768883 best DB hits: BLAST: embl:CAB45522.1; (AJ007046) [acyl-carrier protein]; E=9e-58 pir:T00580; probable [acyl-carrier-protein] S-malonyltransferase (EC; E=1e-57 gb:AAG43518.1; AF210698_1 (AF210698) malonyl-CoA:ACP transacylase; E=1e-56 COG: HI0156; COG0331 (acyl-carrier-protein) S-malonyltransferase; E=6e-52 PFAM: PF00698; Acyl transferase domain; E=3.2e-16; malonyl CoA-ACP transacylase 156968..157897 Rhodopirellula baltica SH 1 1792121 NP_863835.1 CDS fabG NC_005027.1 158031 158789 D PMID: 1556094 PMID: 8759840 best DB hits: BLAST: ddbj:BAB06210.1; (AP001515) 3-oxoacyl-(acyl-carrier protein); E=3e-52 swissprot:Q9X248; FABG_THEMA 3-OXOACYL-[ACYL-CARRIER PROTEIN]; E=7e-50 pir:G75333; 3-oxoacyl-acyl carrier protein reductase - Deinococcus; E=1e-49 COG: BH2491; COG1028 Dehydrogenases with different specificities (related; E=3e-53 BS_fabG; COG1028 Dehydrogenases with different specificities; E=1e-49 RP762; COG1028 Dehydrogenases with different specificities (related; E=7e-48 PFAM: PF00106; short chain dehydrogenase; E=3.2e-73 PF00678; Short chain dehydrogenase/reduct; E=9.9e-16; 3-oxoacyl-ACP reductase 158031..158789 Rhodopirellula baltica SH 1 1790802 NP_863836.1 CDS acpP NC_005027.1 158928 159173 D PMID: 1556094 PMID: 2091027 best DB hits: BLAST: gb:AAC63956.1; (AF038925) acyl carrier protein precursor; E=2e-16 pir:E82128; acyl carrier protein VC2020 [imported] - Vibrio cholerae; E=1e-13 pir:F75333; acyl carrier protein DR1942 [similarity] - Deinococcus; E=3e-13 COG: VC2020; COG0236 Acyl carrier protein; E=1e-14 PFAM: PF00550; Phosphopantetheine attachment site; E=2.2e-19; acyl carrier protein 158928..159173 Rhodopirellula baltica SH 1 1790922 NP_863837.1 CDS RB319 NC_005027.1 159334 159621 D hypothetical protein 159334..159621 Rhodopirellula baltica SH 1 1796934 NP_863838.1 CDS fabF NC_005027.1 159618 160907 D PMID: 7972002 best DB hits: BLAST: pir:G69842; 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); E=1e-105 pir:T12022; 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); E=1e-103 pir:S77464; 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); E=1e-103 COG: BS_yjaY; COG0304 3-oxoacyl-(acyl-carrier-protein) synthase I; E=1e-106 PFAM: PF00896; Phosphorylase 2; E=0.27 PF00108; Thiolase, N-terminal domain; E=0.071 PF00109; Beta-ketoacyl synthase, N-ter; E=1e-78; 3-oxoacyl-ACP synthase 159618..160907 Rhodopirellula baltica SH 1 1791701 NP_863839.1 CDS RB321 NC_005027.1 160852 161607 D PMID: 9741082 best DB hits: BLAST: embl:CAA05049.1; (AJ001848) TDIR [Thauera aromatica]; E=8e-28 gb:AAD12186.1; (U57900) DNA binding protein TutB1; E=1e-24 gb:AAK00179.1; AF222754_7 (AF222754) probable nodulation protein; E=4e-24 COG: PA4196; COG2197 Response regulators consisting of a CheY-like; E=3e-22 PA5511; COG2204 AAA superfamily ATPases with N-terminal receiver; E=1e-15 uvrY; COG2197 Response regulators consisting of a CheY-like receiver; E=2e-10 PFAM: PF00072; Response regulator receiver doma; E=5.1e-23 PF00196; Bacterial regulatory proteins, l; E=5.1e-10; response regulator 160852..161607 Rhodopirellula baltica SH 1 1790777 NP_863840.1 CDS RB322 NC_005027.1 161698 162702 R PMID: 9925549 best DB hits: BLAST: ddbj:BAA34299.1; (AB015853) MexX [Pseudomonas aeruginosa]; E=5e-05 pir:E82263; conserved hypothetical protein VC0913 [imported] -; E=5e-05 pir:A83342; conserved hypothetical protein PA2430 [imported] -; E=5e-05 COG: VC0913; COG0845 Membrane-fusion protein; E=4e-06 PA2430; COG1566 Multidrug resistance efflux pump; E=5e-06 PA2019; COG0845 Membrane-fusion protein; E=1e-05 PFAM: PF00364; Biotin-requiring enzyme; E=0.46 PF00529; HlyD family secretion protein; E=0.0014; multidrug efflux pump complement(161698..162702) Rhodopirellula baltica SH 1 1793641 NP_863841.1 CDS RB324 NC_005027.1 162731 162880 D hypothetical protein 162731..162880 Rhodopirellula baltica SH 1 1790084 NP_863842.1 CDS RB327 NC_005027.1 162916 163155 D hypothetical protein 162916..163155 Rhodopirellula baltica SH 1 1794051 NP_863843.1 CDS pyrE NC_005027.1 163156 163788 R PMID: 6207018 PMID: 1709162 best DB hits: BLAST: pir:B70464; probable orotate phosphoribosyltransferase (EC 2.4.2.10); E=3e-31 pir:S76099; probable orotate phosphoribosyltransferase (EC 2.4.2.10); E=7e-27 pir:A70834; probable orotate phosphoribosyltransferase (EC 2.4.2.10); E=1e-26 COG: aq_1907; COG0461 Orotate phosphoribosyltransferase; E=3e-32 MJ1655; COG0503 Adenine/guanine phosphoribosyltransferases and; E=3e-05 HI0272; COG0461 Orotate phosphoribosyltransferase; E=3e-05 PFAM: PF00156; Phosphoribosyl transferase domai; E=7e-27; orotate phosphoribosyltransferase complement(163156..163788) Rhodopirellula baltica SH 1 1792142 NP_863844.1 CDS RB331 NC_005027.1 163877 165901 D hypothetical protein 163877..165901 Rhodopirellula baltica SH 1 1796531 NP_863845.1 CDS RB334 NC_005027.1 166018 168441 D PMID: 8490659 best DB hits: BLAST: gb:AAD11750.1; (AF067954) cation transporting P-type; E=0.0 swissprot:Q9X5V3; ATCU_RHILV COPPER-TRANSPORTING ATPASE -----; E=0.0 embl:CAC07984.1; (AJ278983) CopF Cu-ATPase [Ralstonia; E=1e-180 COG: sll1920; COG2217 Cation transport ATPases; E=1e-150 PFAM: PF00122; E1-E2 ATPase; E=1.8e-93 PF00702; haloacid dehalogenase-like hyd; E=1.8e-32; copper-transporting ATPase 166018..168441 Rhodopirellula baltica SH 1 1795692 NP_863846.1 CDS RB335 NC_005027.1 168385 168642 R hypothetical protein complement(168385..168642) Rhodopirellula baltica SH 1 1794097 NP_863847.1 CDS RB336 NC_005027.1 168676 169191 R hypothetical protein complement(168676..169191) Rhodopirellula baltica SH 1 1796926 NP_863848.1 CDS RB337 NC_005027.1 169241 169534 D hypothetical protein 169241..169534 Rhodopirellula baltica SH 1 1792910 NP_863849.1 CDS RB339 NC_005027.1 169531 169830 R best DB hits: BLAST: swissprot:P72699; Y230_SYNY3 HYPOTHETICAL 13.3 KD PROTEIN SLL0230; E=9e-37 prf:2118405D; ORF YBL0105 [Saccharomyces cerevisiae]; E=8e-16 pir:D75018; hypothetical protein PAB1240 - Pyrococcus abyssi; E=1e-12 COG: sll0230; COG0011 Uncharacterized ACR; E=9e-38 PFAM: PF01910; Protein of unknown function DUF77; E=3.4e-51; hypothetical protein complement(169531..169830) Rhodopirellula baltica SH 1 1796536 NP_863850.1 CDS RB341 NC_005027.1 169852 170124 D hypothetical protein 169852..170124 Rhodopirellula baltica SH 1 1792232 NP_863851.1 CDS fkpA NC_005027.1 170094 170666 D PMID: 8703024 best DB hits: BLAST: swissprot:O08437; FKBA_AERHY FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS; E=4e-22 pir:H83238; probable peptidyl-prolyl cis-trans isomerase, FkbP-type; E=2e-21 pir:D82331; peptidyl-prolyl cis-trans isomerase, FKBP-type VC0354; E=2e-21 COG: PA3262; COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1; E=2e-22 PFAM: PF00254; FKBP-type peptidyl-prolyl cis-trans; E=1.3e-29; FKBP-type peptidylprolyl isomerase 170094..170666 Rhodopirellula baltica SH 1 1794575 NP_863852.1 CDS RB343 NC_005027.1 170782 171516 R PMID: 8572946 best DB hits: BLAST: gb:AAA96808.1; (L41843) ORF910; [Bacteriophage mv4]; E=0.002; hypothetical protein complement(170782..171516) Rhodopirellula baltica SH 1 1795840 NP_863853.1 CDS RB344 NC_005027.1 171693 173795 R PMID: 11157235 PMID: 10966413 best DB hits: BLAST: ddbj:BAB21059.1; (AB037178) xanthan lyase [Bacillus sp. GL1]; E=3e-13 gb:AAG24953.1; AF242413_1 (AF242413) XalA [Paenibacillus; E=2e-10 gb:AAG42262.1; AF318176_1 (AF318176) xanthan lyase XalB; E=0.050 PFAM: PF00070; Pyridine nucleotide-disulphide; E=0.00077; xanthan lyase complement(171693..173795) Rhodopirellula baltica SH 1 1796503 NP_863854.1 CDS RB347 NC_005027.1 173846 174388 R PMID: 791660310884354 best DB hits: BLAST: pir:S75307; ferredoxin [2Fe-2S] sll1584 [similarity] - Synechocystis; E=2e-29 swissprot:O66511; FER2_AQUAE FERREDOXIN, 2FE-2S (AAFD4) -----; E=3e-08 pdb:1F37; A Chain A, Structure Of A Thioredoxin-Like [2fe-2s]; E=3e-08 COG: sll1584; COG3411 Uncharacterized protein; E=2e-30 TM0010_1; COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51; E=8e-09 aq_108a; COG3411 Uncharacterized protein; E=8e-09; (2Fe-2S) ferredoxin complement(173846..174388) Rhodopirellula baltica SH 1 1795232 NP_863855.1 CDS RB348 NC_005027.1 174256 175818 R PMID: 2303452 best DB hits: BLAST: gb:AAF49287.1; (AE003522) CG7402 gene product [Drosophila; E=4e-41 gb:AAF30402.1; AF109924_1 (AF109924) sulfatase 1 precursor [Helix; E=2e-39 swissprot:P15848; ARSB_HUMAN ARYLSULFATASE B PRECURSOR (ASB); E=6e-38 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=2e-36 PFAM: PF00884; Sulfatase; E=1.4e-48; arylsulfatase complement(174256..175818) Rhodopirellula baltica SH 1 1790158 NP_863856.1 CDS RB352 NC_005027.1 175963 177417 D PMID: 7910580 PMID: 2303452 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=2e-32 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=5e-32 gb:AAA51779.1; (M32373) arylsulfatase B precursor [Homo sapiens]; E=7e-32 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=4e-21 PFAM: PF00884; Sulfatase; E=5.6e-75; arylsulfatase 175963..177417 Rhodopirellula baltica SH 1 1793926 NP_863857.1 CDS RB354 NC_005027.1 177380 177535 R hypothetical protein complement(177380..177535) Rhodopirellula baltica SH 1 1794990 NP_863858.1 CDS RB356 NC_005027.1 177713 178822 D hypothetical protein 177713..178822 Rhodopirellula baltica SH 1 1796501 NP_863859.1 CDS ubiE NC_005027.1 178844 179599 R PMID: 9045837 PMID: 9139683 best DB hits: BLAST: swissprot:O86169; MENH_BACST 2-HEPTAPRENYL-1,4-NAPHTHOQUINONE; E=1e-11 prf:2104259J; ORF 5 [Streptomyces peucetius]; E=3e-09 gb:AAG54506.1; AE005196_4 (AE005196) unknown [Escherichia coli; E=7e-08 COG: DR0026; COG0500 SAM-dependent methyltransferases; E=2e-07 PA5063; COG2226 Methylase involved in ubiquinone/menaquinone; E=3e-07 aq_262; COG0500 SAM-dependent methyltransferases; E=1e-05 PFAM: PF01209; ubiE/COQ5 methyltransferase f; E=0.0065; ubiquinone/menaquinone biosynthesis methyltransferase complement(178844..179599) Rhodopirellula baltica SH 1 1796232 NP_863860.1 CDS RB360 NC_005027.1 179596 180843 R PMID: 11214968; hypothetical protein complement(179596..180843) Rhodopirellula baltica SH 1 1790522 NP_863861.1 CDS RB362 NC_005027.1 180893 181831 R PMID: 10984043 best DB hits: BLAST: pir:G83242; hypothetical protein PA3219 [imported] - Pseudomonas; E=9e-45 pir:D83421; conserved hypothetical protein PA1792 [imported] -; E=0.024 pir:C82150; conserved hypothetical protein VC1850 [imported] -; E=0.030 COG: PA3219; COG2908 Uncharacterized BCR; E=8e-46; hypothetical protein complement(180893..181831) Rhodopirellula baltica SH 1 1791865 NP_863862.1 CDS RB363 NC_005027.1 181855 182100 D hypothetical protein 181855..182100 Rhodopirellula baltica SH 1 1791969 NP_863863.1 CDS RB365 NC_005027.1 182117 183754 R PMID: 11259647; signal peptide complement(182117..183754) Rhodopirellula baltica SH 1 1795892 NP_863864.1 CDS RB367 NC_005027.1 183721 183924 R hypothetical protein complement(183721..183924) Rhodopirellula baltica SH 1 1789894 NP_863865.1 CDS RB368 NC_005027.1 183951 184247 D hypothetical protein 183951..184247 Rhodopirellula baltica SH 1 1790428 NP_863866.1 CDS RB369 NC_005027.1 184244 184384 R hypothetical protein complement(184244..184384) Rhodopirellula baltica SH 1 1792055 NP_863867.1 CDS nrtC NC_005027.1 184428 186089 D PMID: 9495773 PMID: 8437564 best DB hits: BLAST: swissprot:P73450; NRTC_SYNY3 NITRATE TRANSPORT ATP-BINDING PROTEIN; E=3e-61 gb:AAB86900.1; (L27431) nitrate transporter component; NasF; E=2e-51 pir:S75959; nitrate transport protein C-1 - Synechocystis sp.; E=6e-49 COG: sll1452_2; COG0715 ABC-type nitrate/sulfonate/taurine/bicarbonate; E=3e-62; nitrate transport ATP-binding protein 184428..186089 Rhodopirellula baltica SH 1 1791024 NP_863868.1 CDS nrtB NC_005027.1 186173 187288 D PMID: 8437564 best DB hits: BLAST: ddbj:BAA21794.1; (AB000100) intrinsic membrane protein; E=6e-30 swissprot:P38044; NRTB_SYNP7 NITRATE TRANSPORT PERMEase; E=4e-29 gb:AAB86903.1; (L27431) nitrate transporter component; NasE; E=1e-27 COG: sll1451; COG0600 ABC-type nitrate/sulfonate/taurine/bicarbonate; E=9e-28 BB0145; COG1174 ABC-type proline/glycine betaine transport systems,; E=1e-05 PFAM: PF00528; Binding-protein-dependent transpor; E=8.5e-12; nitrate transport permease 186173..187288 Rhodopirellula baltica SH 1 1797016 NP_863869.1 CDS nrtC NC_005027.1 187285 188283 D PMID: 8437564 best DB hits: BLAST: pir:S58789; ATP binding protein nrtC - oscillatoriacean; E=4e-60 swissprot:P38045; NRTC_SYNP7 NITRATE TRANSPORT ATP-BINDING PROTEIN; E=2e-59 pir:S75959; nitrate transport protein C-1 - Synechocystis sp.; E=9e-59 COG: sll1453; COG1116 ABC-type nitrate/sulfonate/taurine/bicarbonate; E=6e-59 NMB0610; COG1130 ABC-type sugar/spermidine/putrescine transport; E=1e-35 PA2308; COG1116 ABC-type nitrate/sulfonate/taurine/bicarbonate; E=2e-35 PFAM: PF00485; Phosphoribulokinase / Uridine kinase; E=0.18 PF00005; ABC transporter; E=2.2e-56; nitrate transport ATP-binding protein 187285..188283 Rhodopirellula baltica SH 1 1792853 NP_863870.1 CDS nrtD NC_005027.1 188377 189222 D PMID: 8437564 best DB hits: BLAST: pir:S75959; nitrate transport protein C-1 - Synechocystis sp.; E=1e-61 pir:S58789; ATP binding protein nrtC - oscillatoriacean; E=1e-61 pir:S77386; nitrate transport protein D-3 - Synechocystis sp.; E=2e-61 COG: sll1453; COG1116 ABC-type nitrate/sulfonate/taurine/bicarbonate; E=2e-62 PA3254; COG1130 ABC-type sugar/spermidine/putrescine transport; E=4e-29 PA2329; COG1116 ABC-type nitrate/sulfonate/taurine/bicarbonate; E=4e-28 PFAM: PF00005; ABC transporter; E=3.5e-57; nitrate transport ATP-binding protein 188377..189222 Rhodopirellula baltica SH 1 1791282 NP_863871.1 CDS RB375 NC_005027.1 189235 190170 D best DB hits: PFAM: PF01590; GAF domain; E=0.89; hypothetical protein 189235..190170 Rhodopirellula baltica SH 1 1791976 NP_863872.1 CDS RB377 NC_005027.1 190095 191966 D PMID: 8635740 PMID: 1834669 best DB hits: BLAST: embl:CAC23825.1; (AL512979) molybdopterin oxidoreductase, iron; E=5e-26 gb:AAD37318.1; AF135170_9 (AF135170) dimethyl sulfoxide reductase; E=2e-25 swissprot:P18776; DMSB_ECOLI ANAEROBIC DIMETHYL SULFOXIDE; E=5e-25 COG: dmsB; COG0437 Fe-S-cluster-containing hydrogenase components 1; E=4e-26 TM0396; COG1142 Fe-S-cluster-containing hydrogenase components 2; E=5e-16 aq_067; COG0437 Fe-S-cluster-containing hydrogenase components 1; E=6e-16 PFAM: PF00037; 4Fe-4S binding domain; E=0.026; molybdopterin oxidoreductase, iron sulfur subunit 190095..191966 Rhodopirellula baltica SH 1 1795641 NP_863873.1 CDS narB NC_005027.1 191963 194224 D PMID: 7868621 best DB hits: BLAST: ddbj:BAA74791.1; (AB017192) nitrate reductase catalytic subunit; E=1e-156 gb:AAB40292.1; (L49163) narB [Nostoc sp. PCC 7120]; E=1e-105 swissprot:P73448; NARB_SYNY3 NITRATE REDUCTASE ----- pir:; E=1e-105 COG: sll1454; COG0243 Anaerobic dehydrogenases, typically; E=1e-106 MTH1552; COG3383 Uncharacterized anaerobic dehydrogenase; E=5e-74 aq_217; COG0243 Anaerobic dehydrogenases, typically; E=4e-69 PFAM: PF00384; Molybdopterin oxidoreductases; E=1.2e-89 PF01568; Molydopterin dinucleotide bin; E=5.9e-29; nitrate reductase catalytic subunit 191963..194224 Rhodopirellula baltica SH 1 1794355 NP_863874.1 CDS nirA NC_005027.1 194217 196058 D ferredoxin-dependent assimilatory nitrite reductase; ferredoxin-nitrite reductase 194217..196058 Rhodopirellula baltica SH 1 1794753 NP_863875.1 CDS cysJ NC_005027.1 196136 197740 D Catalyzes the reduction of sulfite to sulfide, an essential step in the anaerobic sulfate-respiration pathway; sulfite reductase 196136..197740 Rhodopirellula baltica SH 1 1794411 NP_863876.1 CDS RB381 NC_005027.1 197737 197862 D hypothetical protein 197737..197862 Rhodopirellula baltica SH 1 1791483 NP_863877.1 CDS RB382 NC_005027.1 197889 198533 D hypothetical protein 197889..198533 Rhodopirellula baltica SH 1 1791710 NP_863878.1 CDS RB383 NC_005027.1 198058 198732 R hypothetical protein complement(198058..198732) Rhodopirellula baltica SH 1 1795990 NP_863879.1 CDS kptA NC_005027.1 198704 199000 R PMID: 9915792 best DB hits: BLAST: swissprot:Q9I778; KPTA_PSEAE PROBABLE RNA 2'-PHOSPHOTRANSFERASE; E=3e-10 pir:S56556; hypothetical 24.6K protein (iadA-mcrD intergenic region); E=6e-09 swissprot:P39380; KPTA_ECOLI RNA 2'-PHOSPHOTRANSFERASE; E=6e-09 COG: PA0054; COG1859 Uncharacterized ACR; E=3e-11 PFAM: PF01885; Domain of unknown function DUF60; E=6.1e-16; RNA 2-phosphotransferase complement(198704..199000) Rhodopirellula baltica SH 1 1793318 NP_863880.1 CDS RB386 NC_005027.1 199036 202650 R PMID: 8936303 best DB hits: BLAST: pir:T18551; saframycin Mx1 synthetase B - Myxococcus xanthus -----; E=1e-112 pir:T34918; polyketide synthase - Streptomyces coelicolor -----; E=1e-102 pir:H83343; probable non-ribosomal peptide synthetase PA2424; E=1e-101 COG: PA2424_1; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid; E=1e-102 Rv1529; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases; E=7e-83 Ta1189; COG0156 7-keto-8-aminopelargonate synthetase and related; E=6e-62 PFAM: PF00501; AMP-binding enzyme; E=2.2e-08 PF00550; Phosphopantetheine attachment si; E=1.3e-09 PF02490; Aminolevulinic acid synthase dom; E=0.0015; saframycin Mx1 synthetase B complement(199036..202650) Rhodopirellula baltica SH 1 1794262 NP_863881.1 CDS RB388 NC_005027.1 202649 202828 D hypothetical protein 202649..202828 Rhodopirellula baltica SH 1 1794889 NP_863882.1 CDS RB390 NC_005027.1 202881 204269 D PMID: 10094695 best DB hits: BLAST: gb:AAG38844.1; (AY010120) reductasehalogenase; E=9e-35 pir:T30590; alkylhalidase homolog - Amycolatopsis orientalis -----; E=2e-29 pir:T17419; probable alkylhalidase (EC 3.8.1.1) pltA - Pseudomonas; E=7e-29 COG: aq_104; COG0644 Dehydrogenases (flavoproteins); E=2e-07 PFAM: PF01134; Glucose inhibited division prot; E=0.14 PF02254; KTN NAD-binding domain; E=0.15 PF01494; FAD binding domain; E=0.00011; alkylhalidase 202881..204269 Rhodopirellula baltica SH 1 1795406 NP_863883.1 CDS RB392 NC_005027.1 204269 204925 D PMID: 7826004 best DB hits: BLAST: swissprot:P77475; YQAB_ECOLI HYPOTHETICAL 20.8 KDA PROTEIN IN; E=7e-26 gb:AAG57799.1; AE005497_10 (AE005497) phosphatase; E=8e-26 pir:D82431; CbbY family protein VCA0662 [imported] - Vibrio cholerae; E=1e-25 COG: yqaB; COG0637 Predicted phosphatase/phosphohexomutase; E=7e-27 DR0729; COG0546 Predicted phosphatases; E=1e-09 yieH; COG0637 Predicted phosphatase/phosphohexomutase; E=9e-09 PFAM: PF00702; haloacid dehalogenase-like hydro; E=8.5e-24; phosphatase 204269..204925 Rhodopirellula baltica SH 1 1796563 NP_863884.1 CDS RB393 NC_005027.1 205043 207007 R best DB hits: BLAST: ddbj:BAB09011.1; (AB012239) gene_id:K11J9.20~unknown protein; E=0.11 pir:T35304; probable peptidase - Streptomyces coelicolor -----; E=0.19 ddbj:BAA76932.1; (AB024705) fls485 [Homo sapiens]; E=0.83; peptidase complement(205043..207007) Rhodopirellula baltica SH 1 1790557 NP_863885.1 CDS RB394 NC_005027.1 207055 207192 R hypothetical protein complement(207055..207192) Rhodopirellula baltica SH 1 1792662 NP_863886.1 CDS RB395 NC_005027.1 207191 209692 D signal peptide 207191..209692 Rhodopirellula baltica SH 1 1794691 NP_863887.1 CDS RB398 NC_005027.1 209745 211058 D signal peptide 209745..211058 Rhodopirellula baltica SH 1 1796124 NP_863888.1 CDS pgi NC_005027.1 211175 212728 R PMID: 2549364 best DB hits: BLAST: swissprot:P80860; G6PI_BACSU GLUCOSE-6-PHOSPHATE ISOMERASE (GPI); E=6e-53 ddbj:BAB07062.1; (AP001518) glucose-6-phosphate isomerase; E=4e-52 pir:S15937; glucose-6-phosphate isomerase (EC 5.3.1.9) - Bacillus; E=5e-52 COG: BS_pgi; COG0166 Glucose-6-phosphate isomerase; E=6e-54 PFAM: PF00342; Phosphoglucose isomerase; E=6.8e-31; glucose-6-phosphate isomerase complement(211175..212728) Rhodopirellula baltica SH 1 1791219 NP_863889.1 CDS RB402 NC_005027.1 212820 213275 D hypothetical protein 212820..213275 Rhodopirellula baltica SH 1 1791837 NP_863890.1 CDS RB404 NC_005027.1 213284 215665 R best DB hits: PFAM: PF01423; Sm protein; E=0.11; hypothetical protein complement(213284..215665) Rhodopirellula baltica SH 1 1796094 NP_863891.1 CDS RB406 NC_005027.1 215823 217496 R PMID: 10809675 best DB hits: BLAST: gb:AAF72520.1; AF248951_1 (AF248951) mucin-desulfating sulfatase; E=4e-37 pir:F83354; probable sulfatase PA2333 [imported] - Pseudomonas; E=2e-19 gb:AAF55296.1; (AE003712) Sulf1 gene product [Drosophila; E=2e-18 COG: PA2333; COG3119 Arylsulfatase A and related enzymes; E=1e-20 yejM; COG3083 Predicted hydrolase of alkaline phosphatase; E=7e-04 BS_yfnI; COG1368 Phosphoglycerol transferase and related proteins,; E=0.001 PFAM: PF00325; Bacterial regulatory proteins, crp; E=0.29 PF00884; Sulfatase; E=4.3e-51; mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase) complement(215823..217496) Rhodopirellula baltica SH 1 1797044 NP_863892.1 CDS RB409 NC_005027.1 217387 218925 D PMID: 7910580 best DB hits: BLAST: swissprot:P50428; ARSA_MOUSE ARYLSULFATASE A PRECURSOR (ASA); E=2e-38 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=7e-38 gb:AAC27821.1; (AF013158) arylsulfatase [Heliocidaris; E=1e-37 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=2e-25 yejM; COG3083 Predicted hydrolase of alkaline phosphatase; E=1e-05 Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=3e-05 PFAM: PF00884; Sulfatase; E=1.5e-38 PF00391; PEP-utilizing enzyme, mobile do; E=0.65 PF00884; Sulfatase; E=4.6e-44; arylsulfatase 217387..218925 Rhodopirellula baltica SH 1 1793392 NP_863893.1 CDS trpD NC_005027.1 218958 219986 R PMID: 9061023 best DB hits: BLAST: swissprot:P94326; TRPD_BRAJA ANTHRANILATE; E=4e-55 ddbj:BAB05379.1; (AP001512) anthranilate; E=3e-53 swissprot:O66576; TRPD_AQUAE ANTHRANILATE; E=1e-50 COG: BH1660; COG0547 Anthranilate phosphoribosyltransferase; E=2e-54 PFAM: PF02885; Glycosyl transferase,; E=7.5e-13 PF00591; Glycosyl transferase,; E=1.6e-96; anthranilate phosphoribosyltransferase complement(218958..219986) Rhodopirellula baltica SH 1 1793843 NP_863894.1 CDS RB412 NC_005027.1 219979 220110 R hypothetical protein complement(219979..220110) Rhodopirellula baltica SH 1 1795836 NP_863895.1 CDS RB413 NC_005027.1 220107 221150 R PMID: 11997336; signal peptide complement(220107..221150) Rhodopirellula baltica SH 1 1796194 NP_863896.1 CDS iunH NC_005027.1 221324 222268 D PMID: 8634238 best DB hits: BLAST: pdb:1EZR; A Chain A, Crystal Structure Of Nucleoside Hydrolase; E=3e-32 swissprot:Q27546; IUNH_CRIFA INOSINE-URIDINE PREFERRING NUCLEOSIDE; E=2e-31 pdb:2MAS; A Chain A, Purine Nucleoside Hydrolase With A Transition; E=4e-31 COG: yeiK; COG1957 Inosine-uridine nucleoside N-ribohydrolase; E=3e-31 PFAM: PF01156; Inosine-uridine preferring nucle; E=1.9e-51; inosine-uridine preferring nucleoside hydrolase 221324..222268 Rhodopirellula baltica SH 1 1790943 NP_863897.1 CDS RB418 NC_005027.1 222222 223313 D PMID: 1466286 best DB hits: BLAST: gb:AAG59144.1; AE005625_7 (AE005625) orf, hypothetical protein; E=0.15 pir:I78664; hypothetical 34.1K protein (katg-glda intergenic region); E=0.20 swissprot:P32667; YIJE_ECOLI HYPOTHETICAL 32.9 KD PROTEIN IN; E=0.24 PFAM: PF00892; Integral membrane protein DUF6; E=9.9e-10; hypothetical protein 222222..223313 Rhodopirellula baltica SH 1 1794068 NP_863898.1 CDS RB419 NC_005027.1 223486 224613 D PMID: 7768349 best DB hits: BLAST: swissprot:Q11053; PKNH_MYCTU PROBABLE SERINETHREONINE-PROTEIN; E=5e-14 pir:T42076; protein kinase homolog - Streptomyces coelicolor -----; E=2e-13 pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=4e-13 COG: Rv1266c; COG0515 Serine/threonine protein kinases; E=5e-15 PFAM: PF00069; Protein kinase domain; E=3.3e-32; serine/threonine-protein kinase 223486..224613 Rhodopirellula baltica SH 1 1794686 NP_863899.1 CDS suhB NC_005027.1 224577 225464 D PMID: 10747806 best DB hits: BLAST: gb:AAK02399.1; (AE006067) SuhB [Pasteurella multocida]; E=5e-35 ddbj:BAB06354.1; (AP001516) myo-inositol-1(or 4)-monophosphatase; E=2e-33 swissprot:P22783; SUHB_ECOLI EXTRAGENIC SUPPRESSOR PROTEIN SUHB; E=6e-33 COG: BH2635; COG0483 Archaeal fructose-1,6-bisphosphatase and related; E=2e-34 VC2722; COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS); E=4e-11 PFAM: PF00459; Inositol monophosphatase; E=8.5e-66; inositol monophosphatase 224577..225464 Rhodopirellula baltica SH 1 1795740 NP_863900.1 CDS RB423 NC_005027.1 225404 226054 D PMID: 10984043 best DB hits: BLAST: pir:A83440; conserved hypothetical protein PA1644 [imported] -; E=8e-29 pir:F75254; conserved hypothetical protein - Deinococcus radiodurans; E=3e-26 ddbj:BAB05997.1; (AP001515) BH2278~unknown conserved protein; E=1e-24 COG: PA1644; COG1853 Conserved protein/domain typically associated with; E=8e-30; hypothetical protein 225404..226054 Rhodopirellula baltica SH 1 1793509 NP_863901.1 CDS RB424 NC_005027.1 226068 226220 R hypothetical protein complement(226068..226220) Rhodopirellula baltica SH 1 1792234 NP_863902.1 CDS RB426 NC_005027.1 226258 229863 D hypothetical protein 226258..229863 Rhodopirellula baltica SH 1 1790717 NP_863903.1 CDS RB430 NC_005027.1 229809 231377 D hypothetical protein 229809..231377 Rhodopirellula baltica SH 1 1795038 NP_863904.1 CDS RB431 NC_005027.1 231337 231744 D signal peptide 231337..231744 Rhodopirellula baltica SH 1 1794169 NP_863905.1 CDS RB434 NC_005027.1 231791 231988 D hypothetical protein 231791..231988 Rhodopirellula baltica SH 1 1796480 NP_863906.1 CDS RB437 NC_005027.1 232161 233408 D best DB hits: PFAM: PF00589; Phage integrase; E=0.013; hypothetical protein 232161..233408 Rhodopirellula baltica SH 1 1792094 NP_863907.1 CDS RB439 NC_005027.1 233429 233737 D signal peptide 233429..233737 Rhodopirellula baltica SH 1 1796562 NP_863908.1 CDS RB442 NC_005027.1 233878 234756 D hypothetical protein 233878..234756 Rhodopirellula baltica SH 1 1794910 NP_863909.1 CDS RB443 NC_005027.1 234881 235261 D hypothetical protein 234881..235261 Rhodopirellula baltica SH 1 1794528 NP_863910.1 CDS RB444 NC_005027.1 235258 236805 D PMID: 8843436 best DB hits: BLAST: embl:CAC08270.1; (AL392146) ATP-binding protein; E=1e-37; ATP-binding protein 235258..236805 Rhodopirellula baltica SH 1 1796500 NP_863911.1 CDS RB445 NC_005027.1 236794 236904 R hypothetical protein complement(236794..236904) Rhodopirellula baltica SH 1 1794018 NP_863912.1 CDS RB446 NC_005027.1 236928 237320 R PMID: 9266672 best DB hits: BLAST: swissprot:O15442; 239A_HUMAN ADULT BRAIN PROTEIN 239 (239AB); E=4e-19 gb:AAC51673.2; (U84894) 239AB [Homo sapiens]; E=4e-19 prf:2122285A; 239FB gene [Homo sapiens]; E=1e-17 COG: APE2283; COG2129 Predicted phosphoesterases, related to the Icc; E=4e-06; hypothetical protein complement(236928..237320) Rhodopirellula baltica SH 1 1795826 NP_863913.1 CDS RB448 NC_005027.1 237375 237587 R PMID: 9266672 best DB hits: BLAST: swissprot:O15442; 239A_HUMAN ADULT BRAIN PROTEIN 239 (239AB); E=0.014 gb:AAC51673.2; (U84894) 239AB [Homo sapiens]; E=0.014 ref:XP_013018.1; chromosome 22 open reading frame 1 [Homo; E=0.014 PFAM: PF01143; Uncharacterized phosphoesterase fami; E=0.00034; hypothetical protein complement(237375..237587) Rhodopirellula baltica SH 1 1794530 NP_863914.1 CDS RB449 NC_005027.1 237584 238009 R hypothetical protein complement(237584..238009) Rhodopirellula baltica SH 1 1795228 NP_863915.1 CDS RB450 NC_005027.1 237946 238155 R hypothetical protein complement(237946..238155) Rhodopirellula baltica SH 1 1793349 NP_863916.1 CDS RB451 NC_005027.1 238187 238390 D PMID: 7607524 best DB hits: BLAST: swissprot:P50196; MTE8_ECOLI MODIFICATION METHYLASE ECO47II; E=4e-04 swissprot:P45876; DCMR_METSP TRANSCRIPTIONAL REPRESSOR DCMR; E=0.002 pir:T36638; probable substrate binding protein - Streptomyces; E=0.031; site-specific DNA-methyltransferase (cytosine-specific)- transcriptional regulator 238187..238390 Rhodopirellula baltica SH 1 1795128 NP_863917.1 CDS RB452 NC_005027.1 238451 241546 D PMID: 9679194 best DB hits: BLAST: pir:F71079; hypothetical protein PH0902 - Pyrococcus horikoshii; E=8e-08 pir:G75134; hypothetical protein PAB0589 - Pyrococcus abyssi (strain; E=3e-07 pir:G72734; hypothetical protein APE0415 - Aeropyrum pernix (strain; E=0.10 COG: PH0902; COG1483 Predicted ATPase of the AAA+ class; E=7e-09; hypothetical protein 238451..241546 Rhodopirellula baltica SH 1 1793738 NP_863918.1 CDS RB453 NC_005027.1 241543 242112 D hypothetical protein 241543..242112 Rhodopirellula baltica SH 1 1794751 NP_863919.1 CDS RB454 NC_005027.1 242109 245120 D PMID: 9389475 best DB hits: BLAST: ref:NP_071283.1; Predicted DNA methylase containing a Zn-ribbon; E=9e-14 pir:H72310; conserved hypothetical protein - Thermotoga maritima; E=4e-09 pir:A71080; hypothetical protein PH0905 - Pyrococcus horikoshii; E=8e-07 COG: AF2345+6+7; COG1743 Predicted DNA methylase containing a Zn-ribbon; E=8e-15; DNA methylase containing a Zn-ribbon 242109..245120 Rhodopirellula baltica SH 1 1790919 NP_863920.1 CDS RB457 NC_005027.1 245228 246406 D PMID: 8688087 best DB hits: BLAST: gb:AAC37104.1; (L77118) M. jannaschii predicted coding region; E=4e-04 gb:AAG45955.1; AF282921_1 (AF282921) RecF protein; E=0.005 embl:CAA71688.1; (Y10687) purine NTPase [Sulfolobus; E=0.047 COG: jhp0346; COG1106 Predicted ATPases; E=0.005 PFAM: PF02463; SMC domain N terminal domain; E=5.1e-06; hypothetical protein 245228..246406 Rhodopirellula baltica SH 1 1795504 NP_863921.1 CDS RB459 NC_005027.1 246403 247077 D hypothetical protein 246403..247077 Rhodopirellula baltica SH 1 1794542 NP_863922.1 CDS RB460 NC_005027.1 247083 249788 D PMID: 155284 best DB hits: BLAST: pir:T17395; probable DEAH ATP-dependent helicase - Dichelobacter; E=2e-14 gb:AAG20812.1; (AE005149) ATP-dependent RNA helicase; HepA; E=2e-14 pir:D71079; hypothetical protein PH0900 - Pyrococcus horikoshii; E=1e-11 COG: PH0900; COG0553 Superfamily II DNA/RNA helicases, SNF2 family; E=1e-12 MJ0669; COG0513 Superfamily II DNA and RNA helicases; E=8e-08 AF2350; COG0553 Superfamily II DNA/RNA helicases, SNF2 family; E=4e-07 PFAM: PF00176; SNF2 and others N-terminal domain; E=7.6e-06 PF00271; Helicase conserved C-terminal doma; E=1.1e-12; DEAH ATP-dependent helicase 247083..249788 Rhodopirellula baltica SH 1 1794162 NP_863923.1 CDS RB461 NC_005027.1 249801 250751 D PMID: 11016950 best DB hits: BLAST: gb:AAG20152.1; (AE005093) Vng1977h [Halobacterium sp. NRC-1]; E=0.002; hypothetical protein 249801..250751 Rhodopirellula baltica SH 1 1794892 NP_863924.1 CDS RB463 NC_005027.1 250803 251342 D hypothetical protein 250803..251342 Rhodopirellula baltica SH 1 1794015 NP_863925.1 CDS RB464 NC_005027.1 251275 251688 D hypothetical protein 251275..251688 Rhodopirellula baltica SH 1 1792129 NP_863926.1 CDS RB466 NC_005027.1 251791 252036 R hypothetical protein complement(251791..252036) Rhodopirellula baltica SH 1 1791801 NP_863927.1 CDS RB468 NC_005027.1 252026 252319 R hypothetical protein complement(252026..252319) Rhodopirellula baltica SH 1 1795883 NP_863928.1 CDS RB469 NC_005027.1 252291 252425 R best DB hits: PFAM: PF00665; Integrase core domain; E=0.2; hypothetical protein complement(252291..252425) Rhodopirellula baltica SH 1 1791313 NP_863929.1 CDS RB470 NC_005027.1 252456 252713 R PMID: 7518087 best DB hits: BLAST: embl:CAB46576.1; (AJ132945) IS1329 transposase B [Yersinia; E=2e-09 embl:CAB61574.1; (AJ251581) transposase B [Yersinia; E=2e-09 prf:2113421B; transposase [Burkholderia cepacia]; E=4e-09 COG: DRB0019.2; COG2801 transposase; E=5e-12 PFAM: PF00665; Integrase core domain; E=5.4e-05; transposase complement(252456..252713) Rhodopirellula baltica SH 1 1792508 NP_863930.1 CDS RB471 NC_005027.1 252719 253264 R hypothetical protein complement(252719..253264) Rhodopirellula baltica SH 1 1792884 NP_863931.1 CDS RB472 NC_005027.1 253266 253409 D hypothetical protein 253266..253409 Rhodopirellula baltica SH 1 1791619 NP_863932.1 CDS RB473 NC_005027.1 253418 253648 D signal peptide 253418..253648 Rhodopirellula baltica SH 1 1794822 NP_863933.1 CDS RB475 NC_005027.1 253675 255858 R signal peptide complement(253675..255858) Rhodopirellula baltica SH 1 1793398 NP_863934.1 CDS RB479 NC_005027.1 255869 259174 R PMID: 8008069 best DB hits: BLAST: gb:AAA58486.1; (L34075) FKBP-rapamycin associated protein [Homo; E=0.21 prf:2014422A; FKBP-rapamycin-associated protein [Homo sapiens]; E=0.21 gb:AAC39933.1; (U88966) rapamycin associated protein FRAP2 [Homo; E=0.21; FKBP-rapamycin associated protein complement(255869..259174) Rhodopirellula baltica SH 1 1796559 NP_863935.1 CDS RB481 NC_005027.1 259182 262586 R hypothetical protein complement(259182..262586) Rhodopirellula baltica SH 1 1795963 NP_863936.1 CDS RB483 NC_005027.1 262569 262733 D hypothetical protein 262569..262733 Rhodopirellula baltica SH 1 1794191 NP_863937.1 CDS RB484 NC_005027.1 262633 262809 D hypothetical protein 262633..262809 Rhodopirellula baltica SH 1 1795267 NP_863938.1 CDS RB485 NC_005027.1 262831 262968 D hypothetical protein 262831..262968 Rhodopirellula baltica SH 1 1790260 NP_863939.1 CDS RB486 NC_005027.1 262950 263633 D PMID: 8052622 best DB hits: BLAST: pir:E71368; probable RNA polymerase sigma-24 factor (rpoE) -; E=2e-05 gb:AAC45219.1; (U87308) extracytoplasmic function alternative; E=1e-04 pir:T45196; probable transcription initiation factor sigma factor; E=3e-04 COG: TP0092; COG1595 DNA-directed RNA polymerase specialized sigma; E=2e-06 Rv3286c; COG1191 DNA-directed RNA polymerase specialized sigma; E=0.005 Rv1189; COG1595 DNA-directed RNA polymerase specialized sigma; E=0.005; RNA polymerase ECF-type sigma factor 262950..263633 Rhodopirellula baltica SH 1 1793771 NP_863940.1 CDS RB488 NC_005027.1 263647 266280 D hypothetical protein 263647..266280 Rhodopirellula baltica SH 1 1796099 NP_863941.1 CDS RB490 NC_005027.1 266293 267636 D PMID: 11823852; hypothetical protein 266293..267636 Rhodopirellula baltica SH 1 1792513 NP_863942.1 CDS RB492 NC_005027.1 267633 269384 D best DB hits: BLAST: gb:AAD34246.1; AF084398_1 (AF084398) calmodulin mutant SYNCAM46; E=0.002 gb:AAD34433.1; AF084449_1 (AF084449) calmodulin mutant SYNCAM26; E=0.002 prf:1003191A; calmodulin [Oryctolagus cuniculus]; E=0.002 PFAM: PF00036; EF hand; E=0.034 PF00395; S-layer homology domain; E=0.44; calmodulin 267633..269384 Rhodopirellula baltica SH 1 1790452 NP_863943.1 CDS RB497 NC_005027.1 269443 270549 D best DB hits: BLAST: pir:B71126; hypothetical protein PH0776 - Pyrococcus horikoshii; E=9e-66 ddbj:BAB04450.1; (AP001509) BH0731~unknown conserved protein; E=1e-65 pir:C75037; methanol dehydrogenase regulatory protein (moxr-3); E=2e-64 COG: PH0776; COG0714 MoxR-like ATPases; E=8e-67 PFAM: PF01078; Magnesium chelatase, subunit C; E=1.2e-08; regulatory protein 269443..270549 Rhodopirellula baltica SH 1 1795342 NP_863944.1 CDS RB498 NC_005027.1 270596 271717 D PMID: 9634230 best DB hits: BLAST: swissprot:P71761; YE80_MYCTU HYPOTHETICAL 34.3 KDA PROTEIN RV1480; E=7e-17 pir:G70121; conserved hypothetical protein BB0175 - Lyme disease; E=5e-12 pir:D83106; hypothetical protein PA4323 [imported] - Pseudomonas; E=2e-09 COG: Rv1480; COG1721 Uncharacterized ACR; E=7e-18 PFAM: PF01882; Protein of unknown function DU; E=1.3e-17; hypothetical protein 270596..271717 Rhodopirellula baltica SH 1 1792831 NP_863945.1 CDS RB500 NC_005027.1 271714 274110 D signal peptide 271714..274110 Rhodopirellula baltica SH 1 1794461 NP_863946.1 CDS RB502 NC_005027.1 274107 276965 D PMID: 11474104; signal peptide 274107..276965 Rhodopirellula baltica SH 1 1793809 NP_863947.1 CDS RB505 NC_005027.1 276881 281737 D PMID: 11403381 best DB hits: BLAST: embl:CAC28360.1; (AJ306290) myosin heavy chain [Toxocara canis]; E=0.054 gb:AAD29950.1; (AF111784) myosin heavy chain IIa [Homo sapiens]; E=0.19; hypothetical protein 276881..281737 Rhodopirellula baltica SH 1 1789911 NP_863948.1 CDS RB510 NC_005027.1 281746 282996 D signal peptide 281746..282996 Rhodopirellula baltica SH 1 1791441 NP_863949.1 CDS RB512 NC_005027.1 283061 284350 R signal peptide complement(283061..284350) Rhodopirellula baltica SH 1 1796461 NP_863950.1 CDS RB514 NC_005027.1 284397 284567 R hypothetical protein complement(284397..284567) Rhodopirellula baltica SH 1 1791123 NP_863951.1 CDS RB517 NC_005027.1 284655 284828 R hypothetical protein complement(284655..284828) Rhodopirellula baltica SH 1 1795594 NP_863952.1 CDS RB518 NC_005027.1 284784 285023 D hypothetical protein 284784..285023 Rhodopirellula baltica SH 1 1796065 NP_863953.1 CDS RB519 NC_005027.1 284872 285036 R hypothetical protein complement(284872..285036) Rhodopirellula baltica SH 1 1796047 NP_863954.1 CDS RB520 NC_005027.1 284989 286116 D best DB hits: BLAST: pir:S75232; hypothetical protein sll1830 - Synechocystis sp. (strain; E=8e-04; hypothetical protein 284989..286116 Rhodopirellula baltica SH 1 1792459 NP_863955.1 CDS RB521 NC_005027.1 286208 286399 R hypothetical protein complement(286208..286399) Rhodopirellula baltica SH 1 1794669 NP_863956.1 CDS xylR NC_005027.1 286375 287550 D PMID: 8041620 best DB hits: BLAST: swissprot:P37390; XYLR_ECOLI XYLOSE OPERON REGULATORY PROTEIN; E=3e-49 ddbj:BAB03212.1; (AB046360) xylose operon regulatory; E=1e-42 swissprot:P45043; XYLR_HAEIN XYLOSE OPERON REGULATORY PROTEIN; E=3e-42 COG: xylR_1; COG1609 Transcriptional regulators; E=2e-27 xylR_2; COG2207 AraC-type DNA-binding domain-containing proteins; E=1e-15 BS_degA; COG1609 Transcriptional regulators; E=1e-08 PFAM: PF00532; Periplasmic binding proteins; E=0.085 PF00165; Bacterial regulatory helix-tu; E=2e-18; xylose operon regulatory protein 286375..287550 Rhodopirellula baltica SH 1 1793003 NP_863957.1 CDS RB523 NC_005027.1 287547 287798 R hypothetical protein complement(287547..287798) Rhodopirellula baltica SH 1 1791667 NP_863958.1 CDS RB524 NC_005027.1 287813 292486 R PMID: 8843436 best DB hits: BLAST: embl:CAB94634.1; (AL359215) secreted glycosyl hydrolase.; E=1e-09 pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=1e-04 embl:CAB55721.1; (AL117387) hypothetical protein SCF41.18; E=2e-04 PFAM: PF00034; Cytochrome c; E=0.0012; secreted glycosyl hydrolase complement(287813..292486) Rhodopirellula baltica SH 1 1792825 NP_863959.1 CDS RB531 NC_005027.1 292699 293757 R PMID: 2404942 best DB hits: BLAST: pir:S75102; hypothetical protein sll0237 - Synechocystis sp. (strain; E=7e-43 ddbj:BAB04232.1; (AP001508) iron (III) transport system (iron; E=9e-24 ddbj:BAA75385.1; (AB013374) Yvfk [Bacillus halodurans]; E=2e-21 COG: sll0237; COG1840 ABC-type thiamine transport systems, periplasmic; E=6e-44 VC1424; COG0687 Spermidine/putrescine-binding periplasmic protein; E=7e-04 PFAM: PF01547; Bacterial extracellular solut; E=0.027; iron (III) transport system (iron (III)-binding protein) complement(292699..293757) Rhodopirellula baltica SH 1 1793251 NP_863960.1 CDS RB533 NC_005027.1 293751 295241 D hypothetical protein 293751..295241 Rhodopirellula baltica SH 1 1794121 NP_863961.1 CDS RB534 NC_005027.1 295211 295480 R hypothetical protein complement(295211..295480) Rhodopirellula baltica SH 1 1793602 NP_863962.1 CDS RB535 NC_005027.1 295255 295503 R hypothetical protein complement(295255..295503) Rhodopirellula baltica SH 1 1792776 NP_863963.1 CDS pdxJ NC_005027.1 295500 296285 R involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase complement(295500..296285) Rhodopirellula baltica SH 1 1792259 NP_863964.1 CDS RB537 NC_005027.1 296227 296457 D hypothetical protein 296227..296457 Rhodopirellula baltica SH 1 1794539 NP_863965.1 CDS RB538 NC_005027.1 296509 297921 R best DB hits: BLAST: pir:T34935; hypothetical protein SC3F9.13 SC3F9.13 - Streptomyces; E=2e-43 pir:T36186; hypothetical protein SCE29.07c - Streptomyces coelicolor; E=2e-37; hypothetical protein complement(296509..297921) Rhodopirellula baltica SH 1 1793962 NP_863966.1 CDS cinA NC_005027.1 298032 299390 D PMID: 7538190 best DB hits: BLAST: gb:AAB47708.1; (U87792) CinA [Bacillus subtilis]; E=4e-36 swissprot:P46323; CINA_BACSU CINA-LIKE PROTEIN ----- pir:; E=3e-34 ddbj:BAB06104.1; (AP001515) competence-damage inducible protein; E=7e-33 COG: BS_cinA_1; COG1058 Predicted nucleotide-utilizing enzyme related to; E=2e-31; competence-damage inducible protein CinA 298032..299390 Rhodopirellula baltica SH 1 1796481 NP_863967.1 CDS RB541 NC_005027.1 299365 299871 D signal peptide 299365..299871 Rhodopirellula baltica SH 1 1792266 NP_863968.1 CDS RB543 NC_005027.1 299822 300022 D hypothetical protein 299822..300022 Rhodopirellula baltica SH 1 1792441 NP_863969.1 CDS RB544 NC_005027.1 300059 302806 D best DB hits: PFAM: PF01239; Protein prenyltransferase alpha subu; E=0.28; hypothetical protein 300059..302806 Rhodopirellula baltica SH 1 1792207 NP_863970.1 CDS RB546 NC_005027.1 302834 304291 D hypothetical protein 302834..304291 Rhodopirellula baltica SH 1 1796033 NP_863971.1 CDS glgB NC_005027.1 304329 306230 R PMID: 8068720 PMID: 3013861 best DB hits: BLAST: swissprot:P52980; GLGB_STRAU 1,4-ALPHA-GLUCAN BRANCHING ENZYME; E=2e-46 swissprot:P30537; GLGB_BACCL 1,4-ALPHA-GLUCAN BRANCHING ENZYME; E=7e-45 pir:D82511; 1,4-alpha-glucan branching enzyme VCA0016 [imported] -; E=1e-44 COG: VCA0016; COG0296 1,4-alpha-glucan branching enzyme; E=1e-45 BS_amyX; COG1523 Pullulanase and related glycosidases; E=2e-21 YEL011w; COG0296 1,4-alpha-glucan branching enzyme; E=3e-20 PFAM: PF02922; Isoamylase N-terminal domain; E=2.3e-15 PF01208; Uroporphyrinogen decarboxylas; E=0.27 PF00128; Alpha amylase, catalytic doma; E=2.5e-11; 1,4-alpha-glucan branching enzyme complement(304329..306230) Rhodopirellula baltica SH 1 1795129 NP_863972.1 CDS RB549 NC_005027.1 306211 306324 R hypothetical protein complement(306211..306324) Rhodopirellula baltica SH 1 1795154 NP_863973.1 CDS RB550 NC_005027.1 306296 306709 R signal peptide complement(306296..306709) Rhodopirellula baltica SH 1 1797038 NP_863974.1 CDS RB555 NC_005027.1 306967 308226 D PMID: 10984043 best DB hits: BLAST: pir:G83477; probable sigma-70 factor, ECF subfamily PA1351; E=1e-94 swissprot:Q52997; YDNY_RHIME HYPOTHETICAL 47.0 KDA PROTEIN IN DNAA; E=9e-61 pir:T35586; hypothetical protein SC6G4.35 SC6G4.35 - Streptomyces; E=3e-52 COG: PA1351_1; COG1595 DNA-directed RNA polymerase specialized sigma; E=5e-39 PFAM: PF00515; TPR Domain; E=0.00013; ECF subfamily RNA polymerase sigma-70 factor 306967..308226 Rhodopirellula baltica SH 1 1791395 NP_863975.1 CDS RB556 NC_005027.1 308213 308356 D hypothetical protein 308213..308356 Rhodopirellula baltica SH 1 1794511 NP_863976.1 CDS RB557 NC_005027.1 308223 308384 D hypothetical protein 308223..308384 Rhodopirellula baltica SH 1 1794824 NP_863977.1 CDS RB558 NC_005027.1 308327 308491 R hypothetical protein complement(308327..308491) Rhodopirellula baltica SH 1 1795483 NP_863978.1 CDS RB560 NC_005027.1 308542 309384 R PMID: 10984043 best DB hits: BLAST: pir:E83477; conserved hypothetical protein PA1349 [imported] -; E=3e-18 swissprot:Q52996; YDNX_RHIME HYPOTHETICAL 13.6 KDA PROTEIN IN DNAA; E=1e-07 pir:C83475; hypothetical protein PA1354 [imported] - Pseudomonas; E=4e-06; hypothetical protein complement(308542..309384) Rhodopirellula baltica SH 1 1790010 NP_863979.1 CDS RB562 NC_005027.1 309395 309868 R PMID: 11474104; hypothetical protein complement(309395..309868) Rhodopirellula baltica SH 1 1792215 NP_863980.1 CDS RB563 NC_005027.1 309988 310866 R PMID: 10984043 best DB hits: BLAST: pir:C83475; hypothetical protein PA1354 [imported] - Pseudomonas; E=7e-41 pir:T35585; hypothetical protein SC6G4.34 - Streptomyces; E=3e-14 pir:E83575; hypothetical protein PA0557 [imported] - Pseudomonas; E=7e-09; hypothetical protein complement(309988..310866) Rhodopirellula baltica SH 1 1792096 NP_863981.1 CDS RB566 NC_005027.1 311123 312007 R PMID: 9260957 PMID: 11481431 best DB hits: BLAST: gb:AAC45595.1; (AF006743) unknown [Caulobacter crescentus]; E=0.65; transmembrane protein complement(311123..312007) Rhodopirellula baltica SH 1 1790364 NP_863982.1 CDS RB568 NC_005027.1 312112 312345 R hypothetical protein complement(312112..312345) Rhodopirellula baltica SH 1 1791939 NP_863983.1 CDS RB569 NC_005027.1 312309 313103 D PMID: 8843436 best DB hits: BLAST: pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=2e-08 embl:CAB94634.1; (AL359215) secreted glycosyl hydrolase.; E=3e-07 embl:CAB45032.1; (AL078635) large multi-functional; E=8e-05; hypothetical protein 312309..313103 Rhodopirellula baltica SH 1 1793024 NP_863984.1 CDS RB573 NC_005027.1 313188 313316 D hypothetical protein 313188..313316 Rhodopirellula baltica SH 1 1796268 NP_863985.1 CDS RB574 NC_005027.1 313360 317520 D PMID: 10910347 best DB hits: BLAST: pir:D82679; hypothetical protein XF1451 [imported] - Xylella; E=6e-11 COG: XF1451; COG1305 transglutaminases, cysteine; E=5e-12 PFAM: PF01841; Transglutaminase-like superfam; E=0.0045; hypothetical protein 313360..317520 Rhodopirellula baltica SH 1 1793212 NP_863986.1 CDS RB576 NC_005027.1 317768 317929 R hypothetical protein complement(317768..317929) Rhodopirellula baltica SH 1 1794361 NP_863987.1 CDS RB577 NC_005027.1 317961 320072 R PMID: 10684935 best DB hits: BLAST: pir:G71518; hypothetical protein pmpB - Chlamydia trachomatis; E=4e-07 pir:C81675; polymorphic membrane protein BC family TC0694; E=2e-06 gb:AAG57362.1; AE005455_3 (AE005455) ATP-binding; E=3e-05 PFAM: PF02415; Chlamydia protein of unknown functio; E=0.076; hypothetical protein complement(317961..320072) Rhodopirellula baltica SH 1 1791073 NP_863988.1 CDS RB578 NC_005027.1 320069 320230 R hypothetical protein complement(320069..320230) Rhodopirellula baltica SH 1 1794437 NP_863989.1 CDS RB580 NC_005027.1 320366 320590 R hypothetical protein complement(320366..320590) Rhodopirellula baltica SH 1 1795041 NP_863990.1 CDS RB583 NC_005027.1 320566 320787 D hypothetical protein 320566..320787 Rhodopirellula baltica SH 1 1796520 NP_863991.1 CDS RB588 NC_005027.1 320892 324914 D hypothetical protein 320892..324914 Rhodopirellula baltica SH 1 1795074 NP_863992.1 CDS RB598 NC_005027.1 324950 326290 D signal peptide 324950..326290 Rhodopirellula baltica SH 1 1794904 NP_863993.1 CDS RB601 NC_005027.1 326287 327777 D PMID: 7744957 PMID: 8108379 best DB hits: BLAST: pir:A57282; ankyrin-related protein unc-44 - Caenorhabditis elegans; E=1e-18 pir:T15347; ankyrin-related unc-44 - Caenorhabditis elegans -----; E=1e-18 pir:T15344; ankyrin-related unc-44 - Caenorhabditis elegans -----; E=1e-18 COG: slr1109; COG0666 Ankyrin repeat proteins; E=2e-12 PFAM: PF00023; Ank repeat; E=1.3e-08; ankyrin-related protein 326287..327777 Rhodopirellula baltica SH 1 1795800 NP_863994.1 CDS RB605 NC_005027.1 327902 329341 D PMID: 2598936 best DB hits: BLAST: embl:CAA34667.1; (X16679) arylsulfatase [Hemicentrotus; E=1e-33 pir:S07089; arylsulfatase (EC 3.1.6.1) - sea urchin (Lytechinus; E=2e-33 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=2e-33 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=4e-23 yejM; COG3083 Predicted hydrolase of alkaline phosphatase; E=0.006 Rv0663; COG3119 Arylsulfatase A and related enzymes; E=0.008 PFAM: PF00884; Sulfatase; E=5.6e-40; arylsulfatase 327902..329341 Rhodopirellula baltica SH 1 1795676 NP_863995.1 CDS RB607 NC_005027.1 329397 331193 D PMID: 99269066 best DB hits: BLAST: gb:AAF71375.1; AF262989_2 (AF262989) arylsulfatase [Klebsiella; E=3e-30 ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=4e-30 gb:AAF71377.1; AF262990_2 (AF262990) arylsulfatase [Klebsiella; E=5e-30 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=1e-26 VC2041; COG3083 Predicted hydrolase of alkaline phosphatase; E=2e-04 VNG0061C; COG3119 Arylsulfatase A and related enzymes; E=0.002 PFAM: PF00884; Sulfatase; E=1.3e-38; arylsulfatase 329397..331193 Rhodopirellula baltica SH 1 1791859 NP_863996.1 CDS RB609 NC_005027.1 331232 333445 R PMID: 9384377 best DB hits: BLAST: pir:B69988; hypothetical protein ytaP - Bacillus subtilis -----; E=2e-08 gb:AAB68821.1; (AF001926) xylan esterase 1 [Thermoanaerobacterium; E=0.001 pir:G82643; conserved hypothetical protein XF1745 [imported] -; E=0.003 COG: XF1745; COG1073 Hydrolases of the alpha/beta superfamily; E=3e-04 PFAM: PF01738; Dienelactone hydrolase; E=0.53; xylan esterase complement(331232..333445) Rhodopirellula baltica SH 1 1791447 NP_863997.1 CDS RB612 NC_005027.1 333482 333649 D hypothetical protein 333482..333649 Rhodopirellula baltica SH 1 1791871 NP_863998.1 CDS RB614 NC_005027.1 333675 334874 D PMID: 7601151 PMID: 8654419 best DB hits: BLAST: pir:S52317; quinohemoprotein ethanol dehydrogenase (EC 1.1.99.-); E=0.006 gb:AAF86335.1; (AF277373) terahydrofurfuryl alcohol dehydrogenase; E=0.36 pir:A82284; conserved hypothetical protein VC0762 [imported] -; E=0.76 PFAM: PF01011; PQQ enzyme repeat; E=0.29; quinohemoprotein ethanol dehydrogenase 333675..334874 Rhodopirellula baltica SH 1 1793301 NP_863999.1 CDS RB617 NC_005027.1 335196 338141 D PMID: 2110981 best DB hits: BLAST: swissprot:Q00808; HET1_PODAN VEGETATIBLE INCOMPATIBILITY PROTEIN; E=1e-17 gb:AAG40737.1; AF299085_1 (AF299085) Bap1 [Myxococcus xanthus]; E=3e-12 embl:CAB45034.1; (AL078635) WD-repeat containing protein; E=3e-12 COG: sll1491; COG2319 WD40 repeat protein; E=2e-06 PFAM: PF00400; WD domain, G-beta repeat; E=0.017; hypothetical protein 335196..338141 Rhodopirellula baltica SH 1 1795443 NP_864000.1 CDS RB621 NC_005027.1 338154 338729 R PMID: 12024217 best DB hits: BLAST: gb:AAB64901.1; AAB64901 (U33050) Spp41p: Negative regulator of prp; E=0.81 swissprot:P38904; SP41_YEAST SPP41 PROTEIN ----- gb: AAA20494.1; E=0.81; sigma factor complement(338154..338729) Rhodopirellula baltica SH 1 1792097 NP_864001.1 CDS RB624 NC_005027.1 338779 339549 R hypothetical protein complement(338779..339549) Rhodopirellula baltica SH 1 1796525 NP_864002.1 CDS RB625 NC_005027.1 339497 339703 R hypothetical protein complement(339497..339703) Rhodopirellula baltica SH 1 1794645 NP_864003.1 CDS RB626 NC_005027.1 339710 340357 D best DB hits: PFAM: PF00036; EF hand; E=0.00026; hypothetical protein 339710..340357 Rhodopirellula baltica SH 1 1795724 NP_864004.1 CDS RB629 NC_005027.1 340354 340629 D hypothetical protein 340354..340629 Rhodopirellula baltica SH 1 1793942 NP_864005.1 CDS RB631 NC_005027.1 340807 343146 D PMID: 7768349 best DB hits: BLAST: pir:T42100; serinethreonine protein kinase (EC 2.7.1.-) -; E=5e-32 pir:T36502; serinethreonine protein kinase - Streptomyces; E=8e-32 swissprot:P33973; PKN1_MYXXA SERINETHREONINE-PROTEIN KINASE PKN1; E=2e-28 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=3e-29 PFAM: PF00069; Protein kinase domain; E=7e-46 PF00591; Glycosyl transferase,; E=0.28 PF00515; TPR Domain; E=0.0037; serine/threonine protein kinase 340807..343146 Rhodopirellula baltica SH 1 1791904 NP_864006.1 CDS RB633 NC_005027.1 343157 345652 R PMID: 7922023 best DB hits: BLAST: ddbj:BAA83376.1; (AB028841) BbTPO [Branchiostoma belcheri]; E=2e-72 pir:T23007; hypothetical protein K09C8.5 - Caenorhabditis elegans; E=1e-68 gb:AAF51201.1; (AE003582) CG3131 gene product [Drosophila; E=2e-67 PFAM: PF00404; Dockerin type I repeat; E=0.028 PF00141; Peroxidase; E=5.3e-11; peroxidase complement(343157..345652) Rhodopirellula baltica SH 1 1793514 NP_864007.1 CDS RB637 NC_005027.1 345888 346430 D PMID: 7889935 best DB hits: BLAST: gb:AAK03873.1; (AE006215) RpoE [Pasteurella multocida]; E=2e-07 swissprot:P44790; RPOE_HAEIN RNA POLYMERASE SIGMA-E FACTOR; E=2e-06 gb:AAD42769.1; AF121849_1 (AF121849) SigG [Synechococcus sp. PCC; E=2e-05 COG: HI0628; COG1595 DNA-directed RNA polymerase specialized sigma; E=2e-07 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=0.13; ECF subfamily RNA polymerase sigma-70 factor 345888..346430 Rhodopirellula baltica SH 1 1795566 NP_864008.1 CDS RB638 NC_005027.1 346447 347757 D PMID: 8063104 best DB hits: BLAST: swissprot:P54741; AFSK_STRCO SERINETHREONINE PROTEIN KINASE AFSK; E=0.077 embl:CAB88430.1; (AL353815) serinethreonine protein kinase; E=0.077 pir:A82284; conserved hypothetical protein VC0762 [imported] -; E=0.32 PFAM: PF01011; PQQ enzyme repeat; E=0.39; serine/threonine protein kinase 346447..347757 Rhodopirellula baltica SH 1 1791654 NP_864009.1 CDS RB641 NC_005027.1 347897 351409 D best DB hits: BLAST: pir:G82753; two-component system, sensor protein XF0853 [imported] -; E=2e-41 gb:AAA98756.1; (L29642) sensor kinase [Pseudomonas fluorescens]; E=8e-39 pir:A82300; sensory box sensor histidine kinaseresponse regulator; E=4e-34 COG: XF0853; COG0642 Sensory transduction histidine kinases; E=2e-42 sll0779_1; COG2202 PAS/PAC domain; E=1e-23 VCA0736_1; COG0642 Sensory transduction histidine kinases; E=1e-23 PFAM: PF00785; PAC motif; E=8.5e-08 PF00989; PAS domain; E=0.013 PF00785; PAC motif; E=0.1; sensory histidine protein kinase 347897..351409 Rhodopirellula baltica SH 1 1793788 NP_864010.1 CDS RB645 NC_005027.1 351560 353170 R best DB hits: BLAST: embl:CAA71101.1; (Y09979) squalene-hopene cyclase; E=0.72 pir:T48782; lanosterol synthase related protein [imported] -; E=0.76; hypothetical protein complement(351560..353170) Rhodopirellula baltica SH 1 1792697 NP_864011.1 CDS RB651 NC_005027.1 353262 353750 R hypothetical protein complement(353262..353750) Rhodopirellula baltica SH 1 1791207 NP_864012.1 CDS RB655 NC_005027.1 353953 354993 R PMID: 9634230 best DB hits: BLAST: swissprot:Q50653; YP68_MYCTU HYPOTHETICAL 38.0 KDA PROTEIN RV2568C; E=2e-35; hypothetical protein complement(353953..354993) Rhodopirellula baltica SH 1 1793076 NP_864013.1 CDS RB658 NC_005027.1 354990 356228 R best DB hits: BLAST: embl:CAB83202.1; (AJ277117) membrane protein; E=1e-43 pir:H82825; transport protein XF0281 [imported] - Xylella fastidiosa; E=6e-29 gb:AAK04089.1; (AE006236) unknown [Pasteurella multocida]; E=2e-15 COG: XF0281; COG0628 Predicted permease; E=6e-30 PFAM: PF01594; Domain of unknown function DUF20; E=0.00041; permease complement(354990..356228) Rhodopirellula baltica SH 1 1794327 NP_864014.1 CDS RB659 NC_005027.1 356219 356416 D hypothetical protein 356219..356416 Rhodopirellula baltica SH 1 1791088 NP_864015.1 CDS RB661 NC_005027.1 356466 357368 R PMID: 10984043 best DB hits: BLAST: pir:G83411; hypothetical protein PA1872 [imported] - Pseudomonas; E=3e-46 PFAM: PF00560; Leucine Rich Repeat; E=0.12; hypothetical protein complement(356466..357368) Rhodopirellula baltica SH 1 1794516 NP_864016.1 CDS RB663 NC_005027.1 357369 357608 R hypothetical protein complement(357369..357608) Rhodopirellula baltica SH 1 1794729 NP_864017.1 CDS RB666 NC_005027.1 357735 357956 D PMID: 11481431; hypothetical protein 357735..357956 Rhodopirellula baltica SH 1 1794025 NP_864018.1 CDS pldB NC_005027.1 357993 358883 D best DB hits: BLAST: gb:AAB89497.1; (AE000982) lysophospholipase [Archaeoglobus; E=6e-28 gb:AAK05664.1; AE006387_7 (AE006387) conserved hypothetical; E=4e-23 pir:F72264; hypothetical protein TM1350 - Thermotoga maritima; E=5e-21 COG: AF1753; COG2267 Lysophospholipase; E=6e-29 DR1351; COG0596 Predicted hydrolases or acyltransferases (alpha/beta; E=2e-04 DR2522; COG2267 Lysophospholipase; E=4e-04 PFAM: PF00561; alpha/beta hydrolase fold; E=3.2e-07; lysophospholipase 357993..358883 Rhodopirellula baltica SH 1 1795930 NP_864019.1 CDS RB670 NC_005027.1 358905 359315 R hypothetical protein complement(358905..359315) Rhodopirellula baltica SH 1 1794454 NP_864020.1 CDS RB671 NC_005027.1 359218 359586 D hypothetical protein 359218..359586 Rhodopirellula baltica SH 1 1789913 NP_864021.1 CDS RB674 NC_005027.1 359528 359779 R hypothetical protein complement(359528..359779) Rhodopirellula baltica SH 1 1791873 NP_864022.1 CDS RB675 NC_005027.1 359793 361220 R best DB hits: PFAM: PF00324; Amino acid permease; E=0.79; hypothetical protein complement(359793..361220) Rhodopirellula baltica SH 1 1796516 NP_864023.1 CDS rhaA NC_005027.1 361305 362588 R catalyzes the formation of L-rhamnulose from L-rhamnose; L-rhamnose isomerase complement(361305..362588) Rhodopirellula baltica SH 1 1795065 NP_864024.1 CDS RB679 NC_005027.1 362605 362787 R hypothetical protein complement(362605..362787) Rhodopirellula baltica SH 1 1795104 NP_864025.1 CDS rhaR NC_005027.1 362786 363658 D PMID: 3316663 best DB hits: BLAST: swissprot:P09378; RHAR_ECOLI L-RHAMNOSE OPERON TRANSCRIPTIONAL; E=1e-25 gb:AAG59100.1; AE005622_2 (AE005622) positive regulator for rhaRS; E=2e-25 gb:AAG59099.1; AE005622_1 (AE005622) positive regulator for rhaBAD; E=2e-20 COG: rhaR; COG2207 AraC-type DNA-binding domain-containing proteins; E=1e-26 PFAM: PF00165; Bacterial regulatory helix-turn-heli; E=2.7e-30; L-rhamnose operon transcriptional activator 362786..363658 Rhodopirellula baltica SH 1 1795938 NP_864026.1 CDS fucA NC_005027.1 363698 364990 R PMID: 2664711 best DB hits: BLAST: pir:E72546; L-fuculose-phosphate aldolase homolog - Aeropyrum pernix; E=6e-15 pir:C69054; L-fuculose-phosphate aldolase homolog - Methanobacterium; E=3e-14 swissprot:Q57199; YGBL_HAEIN HYPOTHETICAL PROTEIN HI1012 -----; E=9e-13 COG: APE1657; COG0235 Ribulose-5-phosphate 4-epimerase and related; E=6e-16 PFAM: PF00596; Class II Aldolase and Adducin N-t; E=8.8e-19; L-fuculose-phosphate aldolase complement(363698..364990) Rhodopirellula baltica SH 1 1795492 NP_864027.1 CDS RB683 NC_005027.1 365036 366523 R PMID: 7484410 best DB hits: BLAST: gb:AAF52769.1; (AE003624) CG3752 gene product [Drosophila; E=5e-73 ddbj:BAA34785.1; (AB015226) RALDH2 [Homo sapiens]; E=2e-72 swissprot:O94788; DHAS_HUMAN RETINALDEHYDE-SPECIFIC DEHYDROGENASE; E=2e-72 COG: YOR374w; COG1012 NAD-dependent aldehyde dehydrogenases; E=2e-71 PFAM: PF00171; Aldehyde dehydrogenase; E=7e-156; aldehyde dehydrogenase complement(365036..366523) Rhodopirellula baltica SH 1 1796271 NP_864028.1 CDS RB684 NC_005027.1 366596 368557 R PMID: 7744061 best DB hits: BLAST: swissprot:P51691; ARS_PSEAE ARYLSULFATASE (ARYL-SULFATE; E=3e-67 pir:S69336; arylsulfatase (EC 3.1.6.1) - Pseudomonas aeruginosa; E=3e-66 gb:AAF71377.1; AF262990_2 (AF262990) arylsulfatase [Klebsiella; E=1e-53 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=3e-68 HI1246; COG1368 Phosphoglycerol transferase and related proteins,; E=2e-05 PA2333; COG3119 Arylsulfatase A and related enzymes; E=4e-04 PFAM: PF00884; Sulfatase; E=1.3e-78; arylsulfatase complement(366596..368557) Rhodopirellula baltica SH 1 1796567 NP_864029.1 CDS RB686 NC_005027.1 368557 370206 R PMID: 7744061 best DB hits: BLAST: swissprot:P51691; ARS_PSEAE ARYLSULFATASE (ARYL-SULFATE; E=4e-51 pir:S69336; arylsulfatase (EC 3.1.6.1) - Pseudomonas aeruginosa; E=8e-51 gb:AAF71377.1; AF262990_2 (AF262990) arylsulfatase [Klebsiella; E=1e-41 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=4e-52 PFAM: PF00884; Sulfatase; E=2.2e-86; arylsulfatase complement(368557..370206) Rhodopirellula baltica SH 1 1795539 NP_864030.1 CDS RB691 NC_005027.1 370208 370468 R hypothetical protein complement(370208..370468) Rhodopirellula baltica SH 1 1792624 NP_864031.1 CDS RB693 NC_005027.1 370408 371190 R PMID: 7542800 PMID: 11997336 best DB hits: BLAST: swissprot:P43965; YAFM_HAEIN HYPOTHETICAL PROTEIN HI0217 -----; E=0.012 COG: HI0217; COG1943 Predicted transposase; E=0.001; hypothetical protein complement(370408..371190) Rhodopirellula baltica SH 1 1792507 NP_864032.1 CDS RB695 NC_005027.1 371239 373908 R PMID: 20164110 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=2e-39 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=3e-38 gb:AAF49287.1; (AE003522) CG7402 gene product [Drosophila; E=3e-31 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=3e-30 VCA0802; COG1368 Phosphoglycerol transferase and related proteins,; E=1e-04 VNG0061C; COG3119 Arylsulfatase A and related enzymes; E=2e-04 PFAM: PF00143; Interferon alpha/beta domain; E=0.59 PF00884; Sulfatase; E=1.9e-42; N-acetylgalactosamine-6-sulfatase complement(371239..373908) Rhodopirellula baltica SH 1 1794878 NP_864033.1 CDS ramA NC_005027.1 374015 377554 R PMID: 10632887 best DB hits: BLAST: embl:CAB53341.1; (AJ238748) alfa-L-rhamnosidase [Clostridium; E=1e-103 pir:T36406; hypothetical protein SCF34.07 - Streptomyces coelicolor; E=4e-89 embl:CAB55731.1; (AL117387) secreted protein [Streptomyces; E=1e-69 PFAM: PF02083; Urotensin II; E=0.87; alfa-L-rhamnosidase complement(374015..377554) Rhodopirellula baltica SH 1 1793775 NP_864034.1 CDS RB701 NC_005027.1 377648 377797 D hypothetical protein 377648..377797 Rhodopirellula baltica SH 1 1796522 NP_864035.1 CDS RB702 NC_005027.1 377956 378195 R hypothetical protein complement(377956..378195) Rhodopirellula baltica SH 1 1794424 NP_864036.1 CDS RB704 NC_005027.1 378137 378427 D PMID: 9761671 best DB hits: BLAST: gb:AAG58100.1; AE005527_3 (AE005527) unknown protein encoded by; E=0.002 gb:AAG53987.1; AF327445_1 (AF327445) transposase A; E=0.003 gb:AAF28119.1; AF153317_15 (AF153317) InsA [Shigella; E=0.007 COG: PA1937; COG2963 Transposase; E=0.004 PFAM: PF01381; Helix-turn-helix; E=0.53 PF01527; Transposase; E=6.1e-18; transposase 378137..378427 Rhodopirellula baltica SH 1 1794562 NP_864037.1 CDS RB706 NC_005027.1 378430 379308 D PMID: 11735367 best DB hits: BLAST: gb:AAA88919.1; (U13013) ORFB [Leptospira interrogans]; E=3e-47 gb:AAA88916.1; (U13012) ORFB [Leptospira interrogans]; E=1e-46 gb:AAC05649.1; (AF038931) probable transposase-related protein; E=1e-45 COG: DRB0019.2; COG2801 transposase; E=1e-35 PFAM: PF00665; Integrase core domain; E=4.8e-40; transposase 378430..379308 Rhodopirellula baltica SH 1 1794004 NP_864038.1 CDS NP_864038.1 NC_005027.1 379337 380773 R sulfatase 1 precursor complement(379337..380773) Rhodopirellula baltica SH 1 NP_864039.1 CDS RB711 NC_005027.1 380766 381533 R best DB hits: BLAST: embl:CAC24059.1; (AL512981) Hypothetical [Sulfolobus; E=1e-05 pir:A82418; arylesterase VCA0783 [imported] - Vibrio cholerae (group; E=0.057 swissprot:P54451; YQEF_BACSU HYPOTHETICAL 27.6 KD LIPOPROTEIN IN; E=0.49 COG: VCA0783; COG2755 Lysophospholipase L1 and related esterases; E=0.005; hypothetical protein complement(380766..381533) Rhodopirellula baltica SH 1 1791909 NP_864040.1 CDS RB713 NC_005027.1 381726 382076 D hypothetical protein 381726..382076 Rhodopirellula baltica SH 1 1790754 NP_864041.1 CDS RB714 NC_005027.1 381937 384627 D PMID: 11016950 best DB hits: BLAST: gb:AAG18913.1; (AE004993) chromosome segregation; Smc1; E=0.010 COG: VNG0342G; COG1196 Chromosome segregation ATPases; E=0.001; chromosome segregation protein 381937..384627 Rhodopirellula baltica SH 1 1793712 NP_864042.1 CDS RB716 NC_005027.1 384519 386105 D best DB hits: BLAST: gb:AAK03766.1; (AE006204) unknown [Pasteurella multocida]; E=0.34; related to sulfatase 384519..386105 Rhodopirellula baltica SH 1 1790214 NP_864043.1 CDS RB718 NC_005027.1 386095 386211 R hypothetical protein complement(386095..386211) Rhodopirellula baltica SH 1 1790206 NP_864044.1 CDS RB719 NC_005027.1 386206 386481 D hypothetical protein 386206..386481 Rhodopirellula baltica SH 1 1790053 NP_864045.1 CDS RB720 NC_005027.1 386468 387808 R PMID: 20164110 best DB hits: BLAST: gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=2e-23 ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=1e-21 gb:AAF58475.1; (AE003821) CG8646 gene product [Drosophila; E=3e-19 COG: yidJ; COG3119 Arylsulfatase A and related enzymes; E=3e-15 VCA0802; COG1368 Phosphoglycerol transferase and related proteins,; E=3e-07 Rv0663; COG3119 Arylsulfatase A and related enzymes; E=5e-07 PFAM: PF00884; Sulfatase; E=4.9e-29; N-acetylgalactosamine-6-sulfatase complement(386468..387808) Rhodopirellula baltica SH 1 1795142 NP_864046.1 CDS RB723 NC_005027.1 388051 388233 D hypothetical protein 388051..388233 Rhodopirellula baltica SH 1 1795493 NP_864047.1 CDS RB724 NC_005027.1 388252 389658 R PMID: 11181566 best DB hits: BLAST: gb:AAG41945.1; AF304053_1 (AF304053) heparan N-sulfatase [Mus; E=1e-29 gb:AAG41946.1; AF304054_1 (AF304054) mutant heparan N-sulfatase; E=1e-29 gb:AAF29467.1; (AF156255) N-sulfoglucosamine sulfohydrolase [Mus; E=1e-29 COG: Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=3e-25 PFAM: PF00884; Sulfatase; E=1e-29; heparan N-sulfatase complement(388252..389658) Rhodopirellula baltica SH 1 1790267 NP_864048.1 CDS RB728 NC_005027.1 389661 393461 R PMID: 1646017 best DB hits: BLAST: pir:T36406; hypothetical protein SCF34.07 - Streptomyces coelicolor; E=2e-05 pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=0.010 PFAM: PF00034; Cytochrome c; E=0.00011; cytochrome c complement(389661..393461) Rhodopirellula baltica SH 1 1794077 NP_864049.1 CDS RB733 NC_005027.1 392739 393617 D hypothetical protein 392739..393617 Rhodopirellula baltica SH 1 1795058 NP_864050.1 CDS RB735 NC_005027.1 393610 393774 R hypothetical protein complement(393610..393774) Rhodopirellula baltica SH 1 1791014 NP_864051.1 CDS RB736 NC_005027.1 393734 396208 R PMID: 10632887 best DB hits: BLAST: pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=1e-04 embl:CAB53341.1; (AJ238748) alfa-L-rhamnosidase [Clostridium; E=0.019; rhamnosidase complement(393734..396208) Rhodopirellula baltica SH 1 1793457 NP_864052.1 CDS RB741 NC_005027.1 396210 396782 D hypothetical protein 396210..396782 Rhodopirellula baltica SH 1 1790248 NP_864053.1 CDS RB745 NC_005027.1 396869 397759 R PMID: 7684040 best DB hits: BLAST: gb:AAG58136.1; AE005530_2 (AE005530) enzyme [Escherichia; E=1e-83 pir:E65086; hypothetical protein b2999 - Escherichia coli (strain; E=4e-35 pir:F65086; hypothetical protein b3000 - Escherichia coli (strain; E=2e-31 COG: yghX+Y; COG0412 Dienelactone hydrolase and related enzymes; E=3e-36 PFAM: PF01738; Dienelactone hydrolase; E=5.7e-57; carboxymethylenebutenolidase complement(396869..397759) Rhodopirellula baltica SH 1 1794445 NP_864054.1 CDS RB749 NC_005027.1 397939 399552 R PMID: 9371463 best DB hits: BLAST: pir:H69064; serinethreonine protein kinase related protein -; E=5e-05 pir:JC4881; polyvinyl-alcohol dehydrogenase (acceptor) (EC; E=0.017 gb:AAB89850.1; (AE001008) conserved hypothetical protein; E=0.076 COG: MTH1485; COG1520 Uncharacterized proteins of WD40-like repeat family; E=4e-06 PFAM: PF01011; PQQ enzyme repeat; E=0.1 PF00993; Class II histocompatibility ant; E=0.47 PF01011; PQQ enzyme repeat; E=0.00012; serine/threonine protein kinase related protein complement(397939..399552) Rhodopirellula baltica SH 1 1793158 NP_864055.1 CDS RB751 NC_005027.1 399365 400045 R hypothetical protein complement(399365..400045) Rhodopirellula baltica SH 1 1793165 NP_864056.1 CDS RB752 NC_005027.1 399966 403046 D PMID: 10952301 best DB hits: BLAST: pir:E82064; conserved hypothetical protein VC2547 [imported] -; E=0.44; hypothetical protein 399966..403046 Rhodopirellula baltica SH 1 1795101 NP_864057.1 CDS RB754 NC_005027.1 403211 404305 D PMID: 7596293 best DB hits: BLAST: pir:S75310; gumB protein - Synechocystis sp. (strain PCC 6803); E=3e-06 pir:E72350; hypothetical protein TM0638 - Thermotoga maritima; E=0.005 swissprot:Q46629; AMSH_ERWAM AMYLOVORAN EXPORT OUTER MEMBRANE; E=0.012 COG: sll1581; COG1596 Periplasmic protein involved in polysaccharide; E=3e-07 yccZ; COG1596 Periplasmic protein involved in polysaccharide export; E=0.009; polysaccharide export protein 403211..404305 Rhodopirellula baltica SH 1 1793087 NP_864058.1 CDS RB756 NC_005027.1 404655 406817 R PMID: 3040663 PMID: 3260234 PMID: 2404938 best DB hits: BLAST: swissprot:P12287; BLAR_BACLI REGULATORY PROTEIN BLAR1 -----; E=7e-09 pir:I39942; penicillinase antirepressor penJ - Bacillus; E=8e-09 swissprot:P26597; MECR_STAEP METHICILLIN RESISTANCE MECR1 PROTEIN; E=4e-07; beta-lactamase regulatory protein complement(404655..406817) Rhodopirellula baltica SH 1 1796721 NP_864059.1 CDS RB757 NC_005027.1 406810 407223 R PMID: 3096969 PMID: 3305074 PMID: 3260234 PMID: 3040663 PMID: 3498148 best DB hits: BLAST: swissprot:P06555; BLAI_BACLI PENICILLINASE REPRESSOR (REGULATORY; E=0.24 pir:B28183; beta-lactamase repressor protein - Bacillus; E=0.34 swissprot:P26598; MECI_STAEP METHICILLIN RESISTANCE REGULATORY; E=0.60; beta-lactamase repressor protein complement(406810..407223) Rhodopirellula baltica SH 1 1793130 NP_864060.1 CDS RB758 NC_005027.1 407340 407558 R hypothetical protein complement(407340..407558) Rhodopirellula baltica SH 1 1794613 NP_864061.1 CDS RB760 NC_005027.1 407598 409022 D PMID: 20164110 best DB hits: BLAST: gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=7e-47 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=8e-44 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=8e-44 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=6e-26 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=9e-06 Rv3077; COG3119 Arylsulfatase A and related enzymes; E=6e-04 PFAM: PF00884; Sulfatase; E=8.3e-90; N-acetylgalactosamine-6-sulfatase 407598..409022 Rhodopirellula baltica SH 1 1794374 NP_864062.1 CDS RB763 NC_005027.1 409112 411349 D PMID: 8244397 PMID: 8325651 best DB hits: BLAST: gb:AAA16877.1; (L13329) iduronate-2-sulfatase [Homo sapiens]; E=7e-39 gb:AAB33747.1; iduronate-2-sulfatase, IDS {EC 3.1.6.13} [human,; E=3e-38 gb:AAA37880.1; (L07921) iduronate sulfatase [Mus musculus]; E=5e-36 COG: yidJ; COG3119 Arylsulfatase A and related enzymes; E=3e-26 PFAM: PF00884; Sulfatase; E=2e-26; iduronate-2-sulfatase 409112..411349 Rhodopirellula baltica SH 1 1793785 NP_864063.1 CDS RB767 NC_005027.1 411420 412355 D best DB hits: PFAM: PF01453; Lectin (probable mannose binding); E=0.047; signal peptide 411420..412355 Rhodopirellula baltica SH 1 1794876 NP_864064.1 CDS RB772 NC_005027.1 412481 413953 D PMID: 8020961 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=3e-56 pir:S07089; arylsulfatase (EC 3.1.6.1) - sea urchin (Lytechinus; E=4e-56 embl:CAA34667.1; (X16679) arylsulfatase [Hemicentrotus; E=6e-56 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=1e-29 PA1689; COG1368 Phosphoglycerol transferase and related proteins,; E=6e-07 PA2333; COG3119 Arylsulfatase A and related enzymes; E=5e-05 PFAM: PF00884; Sulfatase; E=3.9e-110; N-acetylgalactosamine 6-sulfate sulfatase (GALNS) 412481..413953 Rhodopirellula baltica SH 1 1791769 NP_864065.1 CDS RB773 NC_005027.1 413727 415415 D PMID: 3181160 best DB hits: BLAST: pir:S07089; arylsulfatase (EC 3.1.6.1) - sea urchin (Lytechinus; E=2e-29 swissprot:P14000; ARS_HEMPU ARYLSULFATASE PRECURSOR (ARYL-SULFATE; E=2e-29 embl:CAA34667.1; (X16679) arylsulfatase [Hemicentrotus; E=2e-29 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=3e-25 VC2041; COG3083 Predicted hydrolase of alkaline phosphatase; E=6e-05 VNG0061C; COG3119 Arylsulfatase A and related enzymes; E=9e-05 PFAM: PF00884; Sulfatase; E=6.3e-50; arylsulfatase 413727..415415 Rhodopirellula baltica SH 1 1793353 NP_864066.1 CDS RB774 NC_005027.1 415412 416224 D PMID: 8843436 best DB hits: BLAST: embl:CAB45032.1; (AL078635) large multi-functional; E=7e-23 embl:CAB58265.1; (AL121849) multi-domain protein; E=5e-21 pir:T36423; probable large, multifunctional secreted protein -; E=0.048; large multi-functional protein 415412..416224 Rhodopirellula baltica SH 1 1790100 NP_864067.1 CDS RB776 NC_005027.1 416203 416391 R hypothetical protein complement(416203..416391) Rhodopirellula baltica SH 1 1791787 NP_864068.1 CDS RB777 NC_005027.1 416395 417333 D PMID: 9256491 best DB hits: BLAST: pir:T03516; probable outer membrane secretion protein - Rhodobacter; E=0.040 gb:AAA21546.1; (U13767) HlyA [Anabaena sp.]; E=0.18 gb:AAF36415.1; (AF141932) rhizobiocin RzcA [Rhizobium leguminosarum; E=0.30; outer membrane secretion protein 416395..417333 Rhodopirellula baltica SH 1 1795694 NP_864069.1 CDS RB778 NC_005027.1 417532 418773 R best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide complement(417532..418773) Rhodopirellula baltica SH 1 1793107 NP_864070.1 CDS RB779 NC_005027.1 418785 419045 R hypothetical protein complement(418785..419045) Rhodopirellula baltica SH 1 1790774 NP_864071.1 CDS RB782 NC_005027.1 419050 419298 R hypothetical protein complement(419050..419298) Rhodopirellula baltica SH 1 1792024 NP_864072.1 CDS RB783 NC_005027.1 419311 420540 R best DB hits: BLAST: swissprot:P74311; Y944_SYNY3 HYPOTHETICAL 42.4 KDA PROTEIN SLR0944; E=2e-86 pir:H81780; probable integral membrane efflux protein NMA2095; E=3e-47 gb:AAK04027.1; (AE006231) unknown [Pasteurella multocida]; E=7e-40 COG: slr0944; COG0798 Arsenite efflux pump ACR3 and related permeases; E=2e-87 PFAM: PF01758; Sodium Bile acid symporter family; E=7.8e-49; integral membrane efflux protein complement(419311..420540) Rhodopirellula baltica SH 1 1794163 NP_864073.1 CDS RB785 NC_005027.1 420625 420963 D hypothetical protein 420625..420963 Rhodopirellula baltica SH 1 1793034 NP_864074.1 CDS RB787 NC_005027.1 421117 422328 R PMID: 11325940 best DB hits: BLAST: ddbj:BAA89624.1; (AB036665) similar to transposase of Tn5; E=0.043 embl:CAA23888.1; (V00615) open reading frame [Escherichia coli]; E=0.17 embl:CAA23891.1; (V00617) open reading frame [Escherichia coli]; E=0.17 PFAM: PF01609; Transposase (IS4 family); E=0.079; transposase complement(421117..422328) Rhodopirellula baltica SH 1 1790947 NP_864075.1 CDS RB790 NC_005027.1 422341 422529 R hypothetical protein complement(422341..422529) Rhodopirellula baltica SH 1 1791317 NP_864076.1 CDS RB791 NC_005027.1 422526 422726 R hypothetical protein complement(422526..422726) Rhodopirellula baltica SH 1 1793371 NP_864077.1 CDS RB792 NC_005027.1 422908 424260 D PMID: 9537504 best DB hits: BLAST: pir:H83377; probable transporter PA2135 [imported] - Pseudomonas; E=2e-35 ddbj:BAB07757.1; (AP001520) Na+H+ antiporter [Bacillus; E=0.002 gb:AAF72041.1; AF128238_1 (AF128238) Na+H+ antiporter Cnh1; E=0.003 COG: PA2135; COG0025 NhaP-type Na+/H+ and K+/H+ antiporters; E=1e-36 PFAM: PF00999; Sodium/hydrogen exchanger fami; E=1.3e-14; Na+/H+ antiporter 422908..424260 Rhodopirellula baltica SH 1 1791824 NP_864078.1 CDS RB794 NC_005027.1 424501 424962 D best DB hits: PFAM: PF00459; Inositol monophosphatase; E=0.67; hypothetical protein 424501..424962 Rhodopirellula baltica SH 1 1794944 NP_864079.1 CDS RB795 NC_005027.1 424970 425245 D hypothetical protein 424970..425245 Rhodopirellula baltica SH 1 1790513 NP_864080.1 CDS RB796 NC_005027.1 425294 425506 R hypothetical protein complement(425294..425506) Rhodopirellula baltica SH 1 1792682 NP_864081.1 CDS RB800 NC_005027.1 426227 426385 R signal peptide complement(426227..426385) Rhodopirellula baltica SH 1 1794569 NP_864082.1 CDS RB803 NC_005027.1 426456 426674 D hypothetical protein 426456..426674 Rhodopirellula baltica SH 1 1796498 NP_864083.1 CDS RB807 NC_005027.1 427858 429036 R PMID: 10708371 best DB hits: BLAST: gb:AAG55028.1; AE005248_9 (AE005248) receptor; E=4e-61 gb:AAG54539.1; AE005200_1 (AE005200) Z0271 gene product; E=1e-60 swissprot:P28917; YDCC_ECOLI H REPEAT-ASSOCIATED PROTEIN IN; E=1e-60 PFAM: PF01811; Transposase; E=1.3e-65; transposase complement(427858..429036) Rhodopirellula baltica SH 1 1794053 NP_864084.1 CDS RB809 NC_005027.1 429085 429444 R hypothetical protein complement(429085..429444) Rhodopirellula baltica SH 1 1791818 NP_864085.1 CDS RB812 NC_005027.1 429550 429768 R hypothetical protein complement(429550..429768) Rhodopirellula baltica SH 1 1792240 NP_864086.1 CDS RB813 NC_005027.1 429749 429985 R hypothetical protein complement(429749..429985) Rhodopirellula baltica SH 1 1794895 NP_864087.1 CDS RB814 NC_005027.1 429942 430241 D PMID: 9761671 PMID: 11823852 best DB hits: BLAST: pir:H83522; conserved hypothetical protein PA0979 [imported] -; E=0.33 PFAM: PF01527; Transposase; E=4.2e-19; transposase 429942..430241 Rhodopirellula baltica SH 1 1796462 NP_864088.1 CDS RB815 NC_005027.1 430238 431110 D PMID: 10384242 best DB hits: BLAST: gb:AAB58155.1; (U82621) hypothetical protein [Shigella flexneri]; E=3e-34 gb:AAF09022.1; (AF139596) unknown [Shigella flexneri]; E=3e-34 gb:AAC61713.1; (AF081284) Hp1 [Escherichia coli]; E=1e-33 COG: tra5_g4; COG2801 transposase; E=1e-26 PFAM: PF00665; Integrase core domain; E=5e-39; transposase 430238..431110 Rhodopirellula baltica SH 1 1795553 NP_864089.1 CDS RB817 NC_005027.1 431107 431538 R hypothetical protein complement(431107..431538) Rhodopirellula baltica SH 1 1795354 NP_864090.1 CDS RB818 NC_005027.1 431574 432953 D PMID: 8828137 best DB hits: BLAST: gb:AAC38715.1; (AF030367) maturase-related protein [Streptococcus; E=2e-46 ddbj:BAA90841.1; (AB031210) orf1; similar to E. coli ykfC; E=2e-45 ddbj:BAB03943.1; (AP001507) transposase (11) [Bacillus; E=2e-45 COG: BH0099; COG3344 Uncharacterized BCR; E=2e-46 PFAM: PF00078; Reverse transcriptase (RNA-dependen; E=2.5e-60; reverse transcriptase/maturase 431574..432953 Rhodopirellula baltica SH 1 1793122 NP_864091.1 CDS RB820 NC_005027.1 432966 433259 D hypothetical protein 432966..433259 Rhodopirellula baltica SH 1 1791938 NP_864092.1 CDS RB821 NC_005027.1 433321 433638 D hypothetical protein 433321..433638 Rhodopirellula baltica SH 1 1791495 NP_864093.1 CDS RB822 NC_005027.1 433535 433771 R hypothetical protein complement(433535..433771) Rhodopirellula baltica SH 1 1792443 NP_864094.1 CDS RB825 NC_005027.1 433831 434184 R hypothetical protein complement(433831..434184) Rhodopirellula baltica SH 1 1792773 NP_864095.1 CDS RB827 NC_005027.1 434151 434627 D signal peptide 434151..434627 Rhodopirellula baltica SH 1 1795985 NP_864096.1 CDS RB828 NC_005027.1 434675 435073 D hypothetical protein 434675..435073 Rhodopirellula baltica SH 1 1790276 NP_864097.1 CDS RB829 NC_005027.1 435009 435359 D hypothetical protein 435009..435359 Rhodopirellula baltica SH 1 1794993 NP_864098.1 CDS RB832 NC_005027.1 435506 438748 R PMID: 8407802 best DB hits: BLAST: pir:G64595; acriflavine resistance protein - Helicobacter pylori; E=8e-52 gb:AAC14433.1; (AF059041) RND pump protein [Helicobacter pylori]; E=2e-51 pir:F82171; transporter, AcrBD/F family VC1673 [imported] - Vibrio; E=6e-44 COG: HP0607; COG0841 Cation/multidrug efflux pump; E=8e-53 PFAM: PF00873; AcrB/AcrD/AcrF family; E=5.9e-08; cation/multidrug efflux pump complement(435506..438748) Rhodopirellula baltica SH 1 1792625 NP_864099.1 CDS RB834 NC_005027.1 438745 438894 R hypothetical protein complement(438745..438894) Rhodopirellula baltica SH 1 1795944 NP_864100.1 CDS RB835 NC_005027.1 438956 440851 R best DB hits: BLAST: pir:A83330; probable RND efflux membrane fusion protein precursor; E=0.001 pir:A83342; conserved hypothetical protein PA2430 [imported] -; E=0.009 gb:AAC38085.1; (AF012101) VceA [Vibrio cholerae]; E=0.040 COG: PA2430; COG1566 Multidrug resistance efflux pump; E=9e-04 PFAM: PF00529; HlyD family secretion protein; E=3.1e-06; multidrug resistance efflux pump complement(438956..440851) Rhodopirellula baltica SH 1 1791209 NP_864101.1 CDS RB838 NC_005027.1 440832 441593 R PMID: 10671440 best DB hits: BLAST: gb:AAF20930.1; AF207529_4 (AF207529) PhlH [Pseudomonas; E=2e-04 pir:C70617; probable transcriptional regulator Rv0144 - Mycobacterium; E=0.005 pir:T36792; probable transcriptional regulator tetR - Streptomyces; E=0.022 COG: Rv0144; COG1309 Transcriptional regulator; E=4e-04 PFAM: PF00440; Bacterial regulatory proteins, tetR; E=7.5e-12; transcriptional regulator complement(440832..441593) Rhodopirellula baltica SH 1 1795999 NP_864102.1 CDS RB839 NC_005027.1 441662 441844 D hypothetical protein 441662..441844 Rhodopirellula baltica SH 1 1794495 NP_864103.1 CDS RB841 NC_005027.1 442147 444654 R PMID: 1369081 best DB hits: BLAST: gb:AAB49694.1; (U89495) protease [Bacillus sp. PD498]; E=7e-19 pir:I39973; alkaline serine proteinase - Bacillus smithii -----; E=2e-18 swissprot:P35835; SUBN_BACNA SUBTILISIN NAT PRECURSOR -----; E=1e-17 COG: BS_aprE; COG1404 Subtilisin-like serine proteases; E=2e-18 PFAM: PF00082; Subtilase; E=7.8e-27; subtilisin complement(442147..444654) Rhodopirellula baltica SH 1 1796993 NP_864104.1 CDS RB842 NC_005027.1 444706 444930 R hypothetical protein complement(444706..444930) Rhodopirellula baltica SH 1 1796518 NP_864105.1 CDS RB844 NC_005027.1 445096 449727 D PMID: 93125117 PMID: 95198547 PMID: 11759840 best DB hits: BLAST: pir:S61441; surface-associated protein cshA precursor - Streptococcus; E=6e-05 pir:S27982; cshA protein - Streptococcus gordonii (fragment); E=0.006 ddbj:BAB10333.1; (AB016872) gene_id:K21P3.2~unknown protein; E=0.025 PFAM: PF00404; Dockerin type I repeat; E=0.61; surface-associated protein cshA precursor 445096..449727 Rhodopirellula baltica SH 1 1794231 NP_864106.1 CDS RB850 NC_005027.1 450001 451803 D signal peptide 450001..451803 Rhodopirellula baltica SH 1 1790771 NP_864107.1 CDS RB854 NC_005027.1 451843 452154 R hypothetical protein complement(451843..452154) Rhodopirellula baltica SH 1 1796521 NP_864108.1 CDS ldh NC_005027.1 452224 453138 D PMID: 8404889 PMID: 3098260 best DB hits: BLAST: swissprot:P16115; LDH_THEMA L-LACTATE DEHYDROGENASE ----- pir:; E=2e-51 pdb:1A5Z; Lactate Dehydrogenase From Thermotoga Maritima; E=2e-51 pdb:1LLC; L-Lactate Dehydrogenase (E.C.1.1.1.27) Complex With; E=9e-49 COG: TM1867; COG0039 Malate/lactate dehydrogenases; E=2e-52 PFAM: PF00056; lactate/malate dehydrogenase, NA; E=7.5e-36 PF02866; lactate/malate dehydrogenase, al; E=5e-36; L-lactate/malate dehydrogenase 452224..453138 Rhodopirellula baltica SH 1 1794080 NP_864109.1 CDS RB857 NC_005027.1 453154 454224 R hypothetical protein complement(453154..454224) Rhodopirellula baltica SH 1 1793049 NP_864110.1 CDS RB858 NC_005027.1 454221 456329 R signal peptide complement(454221..456329) Rhodopirellula baltica SH 1 1795127 NP_864111.1 CDS tolQ NC_005027.1 456326 457825 R PMID: 9371459 best DB hits: BLAST: swissprot:O27101; YA22_METTH BIOPOLYMER TRANSPORT PROTEIN; E=0.006 pir:G83274; probable tolQ-type transport protein PA2983 [imported] -; E=0.009 gb:AAD39910.1; AF119047_3 (AF119047) ExbB-like protein [Vibrio; E=0.013 COG: MTH1022; COG0811 Biopolymer transport proteins; E=6e-04 PFAM: PF01618; MotA/TolQ/ExbB proton channel famil; E=4.6e-05; biopolymer transport protein complement(456326..457825) Rhodopirellula baltica SH 1 1794032 NP_864112.1 CDS RB862 NC_005027.1 457775 457945 D hypothetical protein 457775..457945 Rhodopirellula baltica SH 1 1790560 NP_864113.1 CDS RB863 NC_005027.1 457928 458119 R hypothetical protein complement(457928..458119) Rhodopirellula baltica SH 1 1795748 NP_864114.1 CDS RB864 NC_005027.1 458119 458598 D hypothetical protein 458119..458598 Rhodopirellula baltica SH 1 1797089 NP_864115.1 CDS RB865 NC_005027.1 458731 460359 D PMID: 8918248 best DB hits: BLAST: swissprot:P94661; EUO2_CHLPS EARLY UPSTREAM OPEN READING FRAME; E=0.25 swissprot:Q06566; EUO1_CHLPS EARLY UPSTREAM OPEN READING FRAME; E=0.42 swissprot:Q9Z7Z2; Y561_CHLPN HYPOTHETICAL PROTEIN CPN0561CP0189; E=0.44; hypothetical protein 458731..460359 Rhodopirellula baltica SH 1 1795917 NP_864116.1 CDS RB867 NC_005027.1 460429 460731 R hypothetical protein complement(460429..460731) Rhodopirellula baltica SH 1 1796984 NP_864117.1 CDS RB869 NC_005027.1 460848 461063 D signal peptide 460848..461063 Rhodopirellula baltica SH 1 1794861 NP_864118.1 CDS RB870 NC_005027.1 461164 462450 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 461164..462450 Rhodopirellula baltica SH 1 1791963 NP_864119.1 CDS RB871 NC_005027.1 462534 463841 R PMID: 9537320 best DB hits: BLAST: pir:B70374; conserved hypothetical protein aq_854 - Aquifex aeolicus; E=0.002 COG: aq_854; COG0457 TPR-repeat-containing proteins; E=2e-04 PFAM: PF00515; TPR Domain; E=0.0063; hypothetical protein complement(462534..463841) Rhodopirellula baltica SH 1 1790301 NP_864120.1 CDS RB873 NC_005027.1 463836 464060 D hypothetical protein 463836..464060 Rhodopirellula baltica SH 1 1795402 NP_864121.1 CDS RB874 NC_005027.1 464081 465733 D PMID: 11481431; hypothetical protein 464081..465733 Rhodopirellula baltica SH 1 1791204 NP_864122.1 CDS mtrA NC_005027.1 465702 467144 R best DB hits: BLAST: gb:AAD05531.1; (AF083240) c-type cytochrome precursor [Shewanella; E=0.024 gb:AAD05534.1; (AF083240) deca-heme c-type cytochrome [Shewanella; E=0.039; c-type cytochrome precursor complement(465702..467144) Rhodopirellula baltica SH 1 1793362 NP_864123.1 CDS RB879 NC_005027.1 467102 467422 R hypothetical protein complement(467102..467422) Rhodopirellula baltica SH 1 1791431 NP_864124.1 CDS RB880 NC_005027.1 467399 467755 D signal peptide 467399..467755 Rhodopirellula baltica SH 1 1796483 NP_864125.1 CDS RB883 NC_005027.1 467780 468271 D hypothetical protein 467780..468271 Rhodopirellula baltica SH 1 1793045 NP_864126.1 CDS RB885 NC_005027.1 468373 470172 D hypothetical protein 468373..470172 Rhodopirellula baltica SH 1 1795935 NP_864127.1 CDS RB886 NC_005027.1 470277 476306 R PMID: 96163873 best DB hits: BLAST: pir:S75200; fat protein - Synechocystis sp. (strain PCC 6803) -----; E=6e-43 embl:CAA60685.1; (X87241) homologue of Drosophila Fat protein [Homo; E=2e-33 gb:AAD20459.1; (AF100960) protocadherin [Rattus norvegicus]; E=4e-32 PFAM: PF00028; Cadherin domain; E=0.001; hypothetical protein complement(470277..476306) Rhodopirellula baltica SH 1 1792063 NP_864128.1 CDS RB893 NC_005027.1 476445 477704 D PMID: 9884231 best DB hits: BLAST: pir:T28679; fibrinogen-binding protein homolog - Staphylococcus; E=0.003 embl:CAB75732.1; (Y18653) bone sialoprotein-binding protein; E=0.024 pir:T28680; fibrinogen-binding protein homolog - Staphylococcus; E=0.030; fibrinogen-binding protein 476445..477704 Rhodopirellula baltica SH 1 1795612 NP_864129.1 CDS RB895 NC_005027.1 477738 477938 R hypothetical protein complement(477738..477938) Rhodopirellula baltica SH 1 1790831 NP_864130.1 CDS RB896 NC_005027.1 477914 478597 R hypothetical protein complement(477914..478597) Rhodopirellula baltica SH 1 1791169 NP_864131.1 CDS RB897 NC_005027.1 477995 478672 D hypothetical protein 477995..478672 Rhodopirellula baltica SH 1 1795449 NP_864132.1 CDS RB898 NC_005027.1 478681 480243 R PMID: 20233298 PMID: 11743194 best DB hits: BLAST: gb:AAF30402.1; AF109924_1 (AF109924) sulfatase 1 precursor [Helix; E=0.009; sulfatase 1 precursor complement(478681..480243) Rhodopirellula baltica SH 1 1794065 NP_864133.1 CDS RB900 NC_005027.1 480387 482858 R signal peptide complement(480387..482858) Rhodopirellula baltica SH 1 1796561 NP_864134.1 CDS RB905 NC_005027.1 482976 483482 R best DB hits: PFAM: PF00036; EF hand; E=0.00036; hypothetical protein complement(482976..483482) Rhodopirellula baltica SH 1 1789899 NP_864135.1 CDS RB908 NC_005027.1 483544 485055 R hypothetical protein complement(483544..485055) Rhodopirellula baltica SH 1 1791455 NP_864136.1 CDS RB912 NC_005027.1 485013 485501 R PMID: 8052622 best DB hits: BLAST: swissprot:P45215; YE59_HAEIN PROBABLE RNA POLYMERASE SIGMA FACTOR; E=0.28 embl:CAB55836.1; (AJ249581) Sig15 protein [Streptomyces; E=0.38 pir:F81002; probable sigma factor, NMB2144 [imported] - Neisseria; E=0.79 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=5.8e-10; ECF-family RNA polymerase sigma factor complement(485013..485501) Rhodopirellula baltica SH 1 1795690 NP_864137.1 CDS RB913 NC_005027.1 485752 487095 D hypothetical protein 485752..487095 Rhodopirellula baltica SH 1 1792571 NP_864138.1 CDS RB916 NC_005027.1 487115 487360 D hypothetical protein 487115..487360 Rhodopirellula baltica SH 1 1791349 NP_864139.1 CDS RB918 NC_005027.1 487595 488473 D PMID: 7607529 best DB hits: BLAST: swissprot:P55632; Y4QK_RHISN INTEGRASERECOMBINASE Y4QK; E=5e-30 prf:2115270D; integrase [Weeksella zoohelcum]; E=3e-29 swissprot:P55429; Y4EF_RHISN INTEGRASERECOMBINASE Y4EF; E=2e-28 COG: MTH893; COG0582 Integrase; E=4e-26 PFAM: PF00589; Phage integrase; E=2.8e-39; integrase 487595..488473 Rhodopirellula baltica SH 1 1796007 NP_864140.1 CDS RB919 NC_005027.1 488470 488799 R hypothetical protein complement(488470..488799) Rhodopirellula baltica SH 1 1793815 NP_864141.1 CDS RB921 NC_005027.1 488758 489126 D best DB hits: BLAST: gb:AAC23940.1; (U93274) FimV [Pseudomonas aeruginosa]; E=0.78; hypothetical protein 488758..489126 Rhodopirellula baltica SH 1 1797051 NP_864142.1 CDS RB922 NC_005027.1 489145 489258 D hypothetical protein 489145..489258 Rhodopirellula baltica SH 1 1790056 NP_864143.1 CDS RB923 NC_005027.1 489282 489677 D signal peptide 489282..489677 Rhodopirellula baltica SH 1 1796565 NP_864144.1 CDS RB924 NC_005027.1 489774 490400 R hypothetical protein complement(489774..490400) Rhodopirellula baltica SH 1 1795972 NP_864145.1 CDS RB925 NC_005027.1 490025 491152 R PMID: 9163424 best DB hits: BLAST: swissprot:P55631; Y4QJ_RHISN TRANSPOSASE Y4QJ -----; E=1e-38 prf:2115270C; transposase [Weeksella zoohelcum]; E=6e-35 pir:S23782; transposase tnpA (insertion sequence IS91) - Escherichia; E=4e-13; transposase complement(490025..491152) Rhodopirellula baltica SH 1 1795424 NP_864146.1 CDS RB927 NC_005027.1 491254 491937 R PMID: 7607529 best DB hits: BLAST: swissprot:P55632; Y4QK_RHISN INTEGRASERECOMBINASE Y4QK; E=5e-23 swissprot:P55429; Y4EF_RHISN INTEGRASERECOMBINASE Y4EF; E=1e-22 prf:2115270D; integrase [Weeksella zoohelcum]; E=4e-15 COG: PAB0255; COG0582 Integrase; E=5e-15 PFAM: PF00589; Phage integrase; E=2.4e-13; integrase complement(491254..491937) Rhodopirellula baltica SH 1 1793532 NP_864147.1 CDS RB930 NC_005027.1 492023 492148 R hypothetical protein complement(492023..492148) Rhodopirellula baltica SH 1 1791624 NP_864148.1 CDS RB931 NC_005027.1 492159 492278 D hypothetical protein 492159..492278 Rhodopirellula baltica SH 1 1792469 NP_864149.1 CDS RB932 NC_005027.1 492306 492716 D hypothetical protein 492306..492716 Rhodopirellula baltica SH 1 1790834 NP_864150.1 CDS RB933 NC_005027.1 492825 493451 R hypothetical protein complement(492825..493451) Rhodopirellula baltica SH 1 1792135 NP_864151.1 CDS RB934 NC_005027.1 493076 494203 R PMID: 7607529 best DB hits: BLAST: swissprot:P55631; Y4QJ_RHISN TRANSPOSASE Y4QJ -----; E=9e-39 prf:2115270C; transposase [Weeksella zoohelcum]; E=7e-35 pir:S23782; transposase tnpA (insertion sequence IS91) - Escherichia; E=4e-14; transposase complement(493076..494203) Rhodopirellula baltica SH 1 1796476 NP_864152.1 CDS RB936 NC_005027.1 494267 494524 R hypothetical protein complement(494267..494524) Rhodopirellula baltica SH 1 1791713 NP_864153.1 CDS RB938 NC_005027.1 494630 494833 R hypothetical protein complement(494630..494833) Rhodopirellula baltica SH 1 1792911 NP_864154.1 CDS RB940 NC_005027.1 494838 496547 R best DB hits: PFAM: PF02012; BNR repeat; E=0.072; hypothetical protein complement(494838..496547) Rhodopirellula baltica SH 1 1795417 NP_864155.1 CDS RB941 NC_005027.1 496342 498192 R PMID: 8905231 best DB hits: BLAST: pir:S75363; hypothetical protein sll1913 - Synechocystis sp. (strain; E=2e-04 pir:S76658; hypothetical protein - Synechocystis sp. (strain PCC; E=9e-04 embl:CAB62685.1; (AL133422) membrane protein.; E=0.002 PFAM: PF01593; Flavin containing amine oxidase; E=0.49 PF00070; Pyridine nucleotide-disulphide; E=0.14; hypothetical protein complement(496342..498192) Rhodopirellula baltica SH 1 1795136 NP_864156.1 CDS RB943 NC_005027.1 498189 498341 R hypothetical protein complement(498189..498341) Rhodopirellula baltica SH 1 1795987 NP_864157.1 CDS lldP NC_005027.1 498338 500020 R PMID: 11785976 best DB hits: BLAST: ddbj:BAB05550.1; (AP001513) L-lactate permease [Bacillus; E=1e-116 pir:H82393; probable L-lactate permease VCA0983 [imported] - Vibrio; E=1e-105 ddbj:BAB03938.1; (AP001507) L-lactate permease [Bacillus; E=1e-102 COG: BH1831; COG1620 L-lactate permease; E=1e-117 PFAM: PF02652; L-lactate permease; E=1.9e-41; L-lactate permease complement(498338..500020) Rhodopirellula baltica SH 1 1794421 NP_864158.1 CDS RB949 NC_005027.1 500121 500420 D hypothetical protein 500121..500420 Rhodopirellula baltica SH 1 1794457 NP_864159.1 CDS RB950 NC_005027.1 500437 501765 R PMID: 3146645 best DB hits: BLAST: swissprot:Q10858; YJ99_MYCTU HYPOTHETICAL 45.3 KDA TRANSPORT; E=2e-23 embl:CAB76881.1; (AL159139) amino acid transporter; E=2e-16 pir:G82809; amino acid transporter XF0408 [imported] - Xylella; E=3e-15 COG: Rv1999c; COG0531 Amino acid transporters; E=2e-24 BS_gabP; COG1113 Gamma-aminobutyrate and related permeases; E=2e-06 Rv3253c; COG0531 Amino acid transporters; E=4e-06 PFAM: PF00324; Amino acid permease; E=0.00042; amino acid transporter complement(500437..501765) Rhodopirellula baltica SH 1 1790488 NP_864160.1 CDS RB951 NC_005027.1 501755 502459 R hypothetical protein complement(501755..502459) Rhodopirellula baltica SH 1 1793652 NP_864161.1 CDS RB952 NC_005027.1 502128 502904 D hypothetical protein 502128..502904 Rhodopirellula baltica SH 1 1790809 NP_864162.1 CDS RB953 NC_005027.1 502308 503045 R hypothetical protein complement(502308..503045) Rhodopirellula baltica SH 1 1790783 NP_864163.1 CDS RB954 NC_005027.1 503004 503387 D hypothetical protein 503004..503387 Rhodopirellula baltica SH 1 1796760 NP_864164.1 CDS RB955 NC_005027.1 503514 504140 R hypothetical protein complement(503514..504140) Rhodopirellula baltica SH 1 1790246 NP_864165.1 CDS RB956 NC_005027.1 503765 504892 R PMID: 7607529 best DB hits: BLAST: swissprot:P55631; Y4QJ_RHISN TRANSPOSASE Y4QJ -----; E=7e-39 prf:2115270C; transposase [Weeksella zoohelcum]; E=6e-35 pir:S23782; transposase tnpA (insertion sequence IS91) - Escherichia; E=5e-14; transposase complement(503765..504892) Rhodopirellula baltica SH 1 1790837 NP_864166.1 CDS RB957 NC_005027.1 504889 505476 R PMID: 7607529 best DB hits: BLAST: prf:2115270D; integrase [Weeksella zoohelcum]; E=7e-17 swissprot:P55632; Y4QK_RHISN INTEGRASERECOMBINASE Y4QK; E=9e-17 swissprot:P55429; Y4EF_RHISN INTEGRASERECOMBINASE Y4EF; E=5e-16 COG: PAB0255; COG0582 Integrase; E=5e-13 PFAM: PF00589; Phage integrase; E=2.6e-19; integrase complement(504889..505476) Rhodopirellula baltica SH 1 1794114 NP_864167.1 CDS RB962 NC_005027.1 505439 505738 R hypothetical protein complement(505439..505738) Rhodopirellula baltica SH 1 1790542 NP_864168.1 CDS RB963 NC_005027.1 505900 506019 D hypothetical protein 505900..506019 Rhodopirellula baltica SH 1 1795801 NP_864169.1 CDS RB964 NC_005027.1 506032 506475 D hypothetical protein 506032..506475 Rhodopirellula baltica SH 1 1795441 NP_864170.1 CDS RB965 NC_005027.1 506479 506949 D signal peptide 506479..506949 Rhodopirellula baltica SH 1 1796024 NP_864171.1 CDS RB967 NC_005027.1 507068 507280 R hypothetical protein complement(507068..507280) Rhodopirellula baltica SH 1 1791814 NP_864172.1 CDS RB968 NC_005027.1 507079 507840 R hypothetical protein complement(507079..507840) Rhodopirellula baltica SH 1 1793711 NP_864173.1 CDS RB969 NC_005027.1 507238 507945 D signal peptide 507238..507945 Rhodopirellula baltica SH 1 1795499 NP_864174.1 CDS RB971 NC_005027.1 508101 509411 R hypothetical protein complement(508101..509411) Rhodopirellula baltica SH 1 1790225 NP_864175.1 CDS RB973 NC_005027.1 509484 511727 R PMID: 10809675 best DB hits: BLAST: gb:AAF72520.1; AF248951_1 (AF248951) mucin-desulfating sulfatase; E=1e-111 swissprot:Q29460; PA1G_BOVIN PLATELET-ACTIVATING FACTOR; E=4e-23 pdb:1ES9; A Chain A, X-Ray Crystal Structure Of R22k Mutant Of The; E=4e-23 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=4e-23 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=3e-04 yejM; COG3083 Predicted hydrolase of alkaline phosphatase; E=0.005 PFAM: PF00884; Sulfatase; E=2.8e-33 PF00657; Lipase/Acylhydrolase with GDSL-li; E=0.033 PF02266; Platelet activating factor acetyl; E=2.5e-24; mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase) complement(509484..511727) Rhodopirellula baltica SH 1 1792506 NP_864176.1 CDS RB974 NC_005027.1 511880 512353 D best DB hits: BLAST: pir:A82990; conserved hypothetical protein PA5247 [imported] -; E=2e-27 swissprot:P52089; YPAH_PSELE HYPOTHETICAL 21.7 KD PROTEIN IN PAHZ1; E=3e-26 pir:C64767; yaiI protein - Escherichia coli ----- gb:; E=4e-26 COG: PA5247; COG1671 Uncharacterized BCR; E=2e-28 PFAM: PF02639; Uncharacterized BCR, YaiI/YqxD; E=7e-46; hypothetical protein 511880..512353 Rhodopirellula baltica SH 1 1795450 NP_864177.1 CDS nagA NC_005027.1 512471 516040 D PMID: 9301118 best DB hits: BLAST: pir:G72219; conserved hypothetical protein - Thermotoga maritima; E=1e-40 ddbj:BAB06727.1; (AP001517) BH3008~unknown conserved protein; E=2e-36 pir:H71130; hypothetical protein PH0813 - Pyrococcus horikoshii; E=3e-26 COG: TM1723; COG1228 Imidazolonepropionase and related amidohydrolases; E=1e-41 BH0421; COG1820 N-acetylglucosamine-6-phosphate deacetylase; E=1e-04 VC1205; COG1228 Imidazolonepropionase and related amidohydrolases; E=3e-04 PFAM: PF02612; N-acetylglucosamine-6-phosphat; E=0.073 PF01979; Adenine deaminase; E=0.0022 PF00744; Dihydroorotase-like; E=0.48; N-acetylglucosamine-6-phosphate deacetylase 512471..516040 Rhodopirellula baltica SH 1 1791964 NP_864178.1 CDS RB981 NC_005027.1 516037 517344 D PMID: 10192928 best DB hits: BLAST: ddbj:BAB06727.1; (AP001517) BH3008~unknown conserved protein; E=1e-19 pir:G72219; conserved hypothetical protein - Thermotoga maritima; E=3e-16 pir:G71130; hypothetical protein PH0812 - Pyrococcus horikoshii; E=2e-12 COG: BH3008; COG1228 Imidazolonepropionase and related amidohydrolases; E=1e-20 PFAM: PF01311; Bacterial export proteins, famil; E=0.13 PF02612; N-acetylglucosamine-6-phosphate; E=0.17; imidazolonepropionase 516037..517344 Rhodopirellula baltica SH 1 1791534 NP_864179.1 CDS RB983 NC_005027.1 517529 518806 D PMID: 8063104 best DB hits: BLAST: swissprot:P54741; AFSK_STRCO SERINETHREONINE PROTEIN KINASE AFSK; E=0.001 embl:CAB88430.1; (AL353815) serinethreonine protein kinase; E=0.001 pir:H69064; serinethreonine protein kinase related protein -; E=0.001 COG: MTH1485; COG1520 Uncharacterized proteins of WD40-like repeat family; E=1e-04 PFAM: PF01011; PQQ enzyme repeat; E=0.77; serine/threonine protein kinase 517529..518806 Rhodopirellula baltica SH 1 1791569 NP_864180.1 CDS RB988 NC_005027.1 518860 519990 R hypothetical protein complement(518860..519990) Rhodopirellula baltica SH 1 1797019 NP_864181.1 CDS tetA NC_005027.1 520003 521505 D PMID: 1517220 best DB hits: BLAST: pir:H75515; tetracycline-efflux transporter - Deinococcus; E=3e-68 swissprot:P02982; TCR1_ECOLI TETRACYCLINE RESISTANCE PROTEIN,; E=4e-52 ddbj:BAA96336.1; (AB043474) RK2 tetracycline resistance protein; E=8e-52 COG: DR0472; COG0477 Permeases of the major facilitator superfamily; E=3e-69 BS_ywfA; COG2814 Arabinose efflux permease; E=9e-06 bcr; COG0477 Permeases of the major facilitator superfamily; E=1e-05 PFAM: PF01587; Monocarboxylate transporter; E=0.45 PF00083; Sugar (and other) transporter; E=0.36; tetracycline-efflux transporter 520003..521505 Rhodopirellula baltica SH 1 1794537 NP_864182.1 CDS RB993 NC_005027.1 521502 522521 D PMID: 8547173 best DB hits: BLAST: pir:E82632; NAD(P)H steroid dehydrogenase XF1825 [imported] -; E=7e-54 pir:H83099; probable oxidoreductase PA4361 [imported] - Pseudomonas; E=2e-39 gb:AAG11424.1; AC015449_6 (AC015449) Similar to steriod; E=3e-34 COG: XF1825; COG0451 Nucleoside-diphosphate-sugar epimerases; E=7e-55 BH1108; COG1087 UDP-glucose 4-epimerase; E=1e-08 Rv3464; COG1088 dTDP-D-glucose 4,6-dehydratase; E=1e-07 PFAM: PF01370; NAD dependent epimerase/dehydrat; E=0.087 PF00106; short chain dehydrogenase; E=0.038 PF00235; Profilin; E=0.88; 3-beta-hydroxysteroid dehydrogenase 521502..522521 Rhodopirellula baltica SH 1 1797084 NP_864183.1 CDS RB994 NC_005027.1 522493 523314 R signal peptide complement(522493..523314) Rhodopirellula baltica SH 1 1791868 NP_864184.1 CDS ogt NC_005027.1 523512 525038 D PMID: 9083067 best DB hits: COG: BH1262; COG0457 TPR-repeat-containing proteins; E=3e-05 PFAM: PF00533; BRCA1 C Terminus (BRCT) domain; E=7.9e-06 PF00515; TPR Domain; E=0.012; O-linked GlcNAc transferase 523512..525038 Rhodopirellula baltica SH 1 1790284 NP_864185.1 CDS RB1002 NC_005027.1 525099 527222 D hypothetical protein 525099..527222 Rhodopirellula baltica SH 1 1794500 NP_864186.1 CDS RB1005 NC_005027.1 527260 528696 R PMID: 11016950 best DB hits: BLAST: gb:AAG18863.1; (AE004989) Vng0271c [Halobacterium sp. NRC-1]; E=7e-30 gb:AAG45169.1; AF317883_1 (AF317883) unknown [Synechococcus sp.; E=8e-20 pir:T45180; hypothetical protein u1756l [imported] - Mycobacterium; E=0.026 COG: VNG0271C; COG0463 Glycosyltransferases involved in cell wall; E=7e-31; glycosyltransferase complement(527260..528696) Rhodopirellula baltica SH 1 1791421 NP_864187.1 CDS RB1009 NC_005027.1 528696 529694 D PMID: 11123673 best DB hits: BLAST: pir:A75484; conserved hypothetical protein - Deinococcus radiodurans; E=2e-24 pir:D72252; conserved hypothetical protein - Thermotoga maritima; E=1e-23 embl:CAB89843.1; (AJ251547) response regulator [Xanthomonas; E=2e-23 COG: DR0719; COG2206 HD-GYP domain; E=2e-25 PFAM: PF01966; HD domain; E=7.2e-08; response regulator 528696..529694 Rhodopirellula baltica SH 1 1795223 NP_864188.1 CDS RB1010 NC_005027.1 529655 530116 D hypothetical protein 529655..530116 Rhodopirellula baltica SH 1 1789964 NP_864189.1 CDS RB1012 NC_005027.1 530176 530328 D hypothetical protein 530176..530328 Rhodopirellula baltica SH 1 1790011 NP_864190.1 CDS RB1013 NC_005027.1 530325 534392 R PMID: 9384377 best DB hits: BLAST: pir:H69818; conserved hypothetical protein yhaN - Bacillus subtilis; E=7e-08 gb:AAC44802.1; (U21636) unknown [Staphylococcus aureus]; E=4e-06 pir:F72363; hypothetical protein - Thermotoga maritima (strain MSB8); E=0.005; hypothetical protein complement(530325..534392) Rhodopirellula baltica SH 1 1792597 NP_864191.1 CDS RB1015 NC_005027.1 531723 532391 D hypothetical protein 531723..532391 Rhodopirellula baltica SH 1 1794857 NP_864192.1 CDS RB1021 NC_005027.1 534374 535705 R PMID: 9384377 best DB hits: BLAST: pir:A69819; probable phosphoesterase (EC 3.1.-.-) yhaO - Bacillus; E=6e-12 COG: BS_yhaO; COG0420 DNA repair exonuclease; E=5e-13 PFAM: PF02549; DNA repair exonuclease; E=6.5e-05; DNA repair exonuclease complement(534374..535705) Rhodopirellula baltica SH 1 1797015 NP_864193.1 CDS RB1022 NC_005027.1 535760 536701 R PMID: 1482681 best DB hits: BLAST: embl:CAB59581.1; (AL132662) possible gluconolactonase precursor; E=1e-19 pir:B82698; gluconolactonase precursor XF1297 [imported] - Xylella; E=2e-19 pir:A75539; probable gluconolactonase - Deinococcus radiodurans; E=2e-16 COG: XF1297; COG3386 Uncharacterized protein; E=2e-20; gluconolactonase complement(535760..536701) Rhodopirellula baltica SH 1 1791683 NP_864194.1 CDS RB1027 NC_005027.1 536965 538317 R PMID: 11157937 best DB hits: BLAST: pir:F71196; probable hexosyltransferase (EC 2.4.1.-) PH1844 -; E=1e-09 pir:T35150; probable glycosyl transferase - Streptomyces coelicolor; E=8e-09 swissprot:Q9R9N2; LPSB_RHIME LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS; E=3e-08 COG: PH1844; COG0438 Predicted glycosyltransferases; E=1e-10 PFAM: PF00534; Glycosyl transferases group 1; E=2.7e-25; hexosyltransferase complement(536965..538317) Rhodopirellula baltica SH 1 1790228 NP_864195.1 CDS RB1029 NC_005027.1 538080 538883 D hypothetical protein 538080..538883 Rhodopirellula baltica SH 1 1790176 NP_864196.1 CDS RB1033 NC_005027.1 539076 539978 D hypothetical protein 539076..539978 Rhodopirellula baltica SH 1 1796524 NP_864197.1 CDS RB1036 NC_005027.1 539939 541381 D hypothetical protein 539939..541381 Rhodopirellula baltica SH 1 1794182 NP_864198.2 CDS serS NC_005027.1 541520 542800 D catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 541520..542800 Rhodopirellula baltica SH 1 1793846 NP_864199.1 CDS RB1040 NC_005027.1 542742 543053 R hypothetical protein complement(542742..543053) Rhodopirellula baltica SH 1 1796502 NP_864200.1 CDS RB1043 NC_005027.1 543083 543352 D hypothetical protein 543083..543352 Rhodopirellula baltica SH 1 1795359 NP_864201.1 CDS RB1044 NC_005027.1 543422 544231 D best DB hits: BLAST: pir:T36187; hypothetical protein SCE29.08c - Streptomyces coelicolor; E=6e-52 pir:T34934; hypothetical protein SC3F9.12 SC3F9.12 - Streptomyces; E=9e-47 swissprot:Q58778; YD83_METJA HYPOTHETICAL PROTEIN MJ1383 PRECURSOR; E=7e-19 COG: MJ1383; COG1099 Predicted metal-dependent hydrolases with the; E=6e-20; metal-dependent hydrolase 543422..544231 Rhodopirellula baltica SH 1 1790312 NP_864202.1 CDS recG NC_005027.1 544232 546436 D PMID: 7774596 PMID: 1938888 best DB hits: BLAST: pir:H75338; DNA helicase RecG - Deinococcus radiodurans (strain R1); E=1e-114 swissprot:Q55681; RECG_SYNY3 ATP-DEPENDENT DNA HELICASE RECG; E=1e-111 pir:G72405; ATP-dependent DNA helicase - Thermotoga maritima (strain; E=1e-109 COG: DR1916; COG1200 RecG-like helicases; E=1e-115 BS_mfd; COG1197 Transcription-repair coupling factor - superfamily; E=5e-56 sll0377; COG1197 Transcription-repair coupling factor - superfamily II; E=2e-54 PFAM: PF01336; OB-fold nucleic acid binding domai; E=0.13 PF00271; Helicase conserved C-terminal doma; E=0.0098 PF00270; DEAD/DEAH box helicase; E=2.9e-21; ATP-dependent DNA helicase RecG 544232..546436 Rhodopirellula baltica SH 1 1791515 NP_864203.1 CDS RB1047 NC_005027.1 546446 546643 D hypothetical protein 546446..546643 Rhodopirellula baltica SH 1 1794620 NP_864204.1 CDS RB1048 NC_005027.1 546640 547866 D best DB hits: BLAST: pir:A69643; serine proteinase Do, heat-shock protein htrA - Bacillus; E=0.77 PFAM: PF00590; Tetrapyrrole (Corrin/Porphyri; E=0.39; signal peptide 546640..547866 Rhodopirellula baltica SH 1 1793819 NP_864205.1 CDS RB1050 NC_005027.1 547902 548189 D hypothetical protein 547902..548189 Rhodopirellula baltica SH 1 1792273 NP_864206.1 CDS RB1052 NC_005027.1 548353 549528 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.014; hypothetical protein 548353..549528 Rhodopirellula baltica SH 1 1796029 NP_864207.1 CDS RB1056 NC_005027.1 549506 549727 R hypothetical protein complement(549506..549727) Rhodopirellula baltica SH 1 1792327 NP_864208.1 CDS RB1057 NC_005027.1 549724 549933 R hypothetical protein complement(549724..549933) Rhodopirellula baltica SH 1 1791757 NP_864209.1 CDS RB1059 NC_005027.1 550031 550912 D signal peptide 550031..550912 Rhodopirellula baltica SH 1 1792729 NP_864210.1 CDS RB1060 NC_005027.1 550990 553890 R hypothetical protein complement(550990..553890) Rhodopirellula baltica SH 1 1796300 NP_864211.1 CDS RB1063 NC_005027.1 554028 555143 D PMID: 10086842 best DB hits: BLAST: pir:T04014; hypothetical protein F17A8.20 - Arabidopsis thaliana; E=4e-24 ddbj:BAB07562.1; (AP001520) oxidoreductase [Bacillus halodurans]; E=8e-21 gb:AAD39613.1; AC007454_12 (AC007454) Similar to gb D14605 AX110P; E=2e-20 COG: BH3843; COG0673 Predicted dehydrogenases and related proteins; E=8e-22 PFAM: PF01408; Oxidoreductase, NAD-bin; E=4.8e-38; oxidoreductase 554028..555143 Rhodopirellula baltica SH 1 1795554 NP_864212.1 CDS glnB NC_005027.1 555140 555457 D PMID: 2574599 best DB hits: BLAST: swissprot:Q52905; GLNB_RHIME NITROGEN REGULATORY PROTEIN P-II; E=3e-18 gb:AAD56036.1; AF182395_2 (AF182395) P-II regulatory protein; E=1e-17 swissprot:P21193; GLNB_AZOBR NITROGEN REGULATORY PROTEIN P-II; E=1e-17 COG: NMB1995; COG0347 Nitrogen regulatory protein PII; E=7e-18 PFAM: PF00543; Nitrogen regulatory protein P-II; E=5.6e-25; nitrogen regulatory protein P-II 555140..555457 Rhodopirellula baltica SH 1 1791729 NP_864213.1 CDS RB1066 NC_005027.1 555508 557970 R hypothetical protein complement(555508..557970) Rhodopirellula baltica SH 1 1791923 NP_864214.1 CDS RB1072 NC_005027.1 558070 558234 R hypothetical protein complement(558070..558234) Rhodopirellula baltica SH 1 1792497 NP_864215.1 CDS rbsC NC_005027.1 558194 559255 D PMID: 7921236 PMID: 9922273 best DB hits: BLAST: embl:CAB66286.1; (AL136519) bifunctional carbohydrate binding and; E=8e-26 swissprot:P36948; RBSC_BACSU RIBOSE TRANSPORT SYSTEM PERMEASE; E=1e-23 pir:S72834; hypothetical protein B1620_F2_68 - Mycobacterium leprae; E=2e-23 COG: BS_rbsC; COG1172 Ribose/xylose/arabinose/galactoside ABC-type; E=3e-23 yphD; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport; E=3e-23 VCA0129; COG1172 Ribose/xylose/arabinose/galactoside ABC-type; E=3e-23; ribose transport system permease 558194..559255 Rhodopirellula baltica SH 1 1795083 NP_864216.1 CDS RB1077 NC_005027.1 559252 560544 D hypothetical protein 559252..560544 Rhodopirellula baltica SH 1 1792954 NP_864217.1 CDS adk NC_005027.1 560614 561939 D PMID: 2997739 PMID: 2844237 best DB hits: BLAST: swissprot:O24706; KAD_SYNP6 ADENYLATE KINASE (ATP-AMP; E=3e-08 gb:AAC41513.1; (L47150) adenylate kinase [Neisseria meningitidis]; E=2e-07 swissprot:P49980; KAD_NEIMA ADENYLATE KINASE (ATP-AMP; E=2e-07 COG: NMB0823; COG0563 Adenylate kinase and related kinases; E=2e-08 PFAM: PF00406; Adenylate kinase; E=0.062; adenylate kinase 560614..561939 Rhodopirellula baltica SH 1 1793194 NP_864218.1 CDS RB1081 NC_005027.1 561926 562624 D PMID: 8843436 best DB hits: BLAST: embl:CAB93401.1; (AL357524) hypothetical protein SCD12A.10c; E=2e-04 ddbj:BAB06409.1; (AP001516) BH2690~unknown [Bacillus halodurans]; E=0.002 pir:T09897; hypothetical protein T22A6.170 - Arabidopsis thaliana; E=0.038 COG: BH2690; COG0775 Nucleoside phosphorylase; E=2e-04; nucleoside phosphorylase 561926..562624 Rhodopirellula baltica SH 1 1792046 NP_864219.1 CDS RB1082 NC_005027.1 562639 564681 R hypothetical protein complement(562639..564681) Rhodopirellula baltica SH 1 1794049 NP_864220.1 CDS RB1088 NC_005027.1 564890 565975 D signal peptide 564890..565975 Rhodopirellula baltica SH 1 1795569 NP_864221.1 CDS RB1090 NC_005027.1 565046 566227 R hypothetical protein complement(565046..566227) Rhodopirellula baltica SH 1 1792153 NP_864222.1 CDS faoA NC_005027.1 565978 567168 D PMID: 1607366 best DB hits: BLAST: swissprot:P28793; FAOB_PSEFR FATTY OXIDATION COMPLEX ALPHA SUBUNIT; E=6e-27 pir:G83269; fatty-acid oxidation complex alpha-subunit PA3014; E=2e-25 pir:T34706; fatty acid oxidation complex alpha-subunit -; E=1e-24 COG: PA3014_2; COG1250 3-Hydroxyacyl-CoA dehydrogenase; E=2e-26 PFAM: PF02737; 3-hydroxyacyl-CoA dehydrogenase, NAD; E=6.3e-15 PF00725; 3-hydroxyacyl-CoA dehydrogenase, C-t; E=7.2e-14; fatty oxidation complex alpha subunit 565978..567168 Rhodopirellula baltica SH 1 1794840 NP_864223.1 CDS RB1093 NC_005027.1 567152 567412 R hypothetical protein complement(567152..567412) Rhodopirellula baltica SH 1 1790911 NP_864224.1 CDS RB1095 NC_005027.1 567469 569046 D hypothetical protein 567469..569046 Rhodopirellula baltica SH 1 1792408 NP_864225.1 CDS RB1097 NC_005027.1 569067 570281 R PMID: 11889109; hypothetical protein complement(569067..570281) Rhodopirellula baltica SH 1 1790474 NP_864226.1 CDS capC NC_005027.1 570278 570778 R PMID: 2536679 best DB hits: BLAST: gb:AAF13662.1; AF188935_60 (AF188935) pXO2-57 [Bacillus anthracis]; E=2e-05 gb:AAB41842.1; (U60883) CapC [Bacillus firmus]; E=7e-04 pir:G70069; poly-gamma-glutamic synthesis pgsC protein - Bacillus; E=0.002; capsule biosynthesis protein CapC complement(570278..570778) Rhodopirellula baltica SH 1 1791427 NP_864227.1 CDS capB NC_005027.1 570780 572105 R PMID: 2536679 best DB hits: BLAST: swissprot:P19580; CAPB_BACAN CAPB PROTEIN ----- pir: A30091; E=7e-53 gb:AAF13663.1; AF188935_61 (AF188935) pXO2-58 [Bacillus anthracis]; E=7e-53 pir:F70069; poly-gamma-glutamic synthesis pgsB protein - Bacillus; E=4e-50; capsule biosynthesis protein CapB complement(570780..572105) Rhodopirellula baltica SH 1 1791869 NP_864228.1 CDS RB1104 NC_005027.1 572078 572257 D hypothetical protein 572078..572257 Rhodopirellula baltica SH 1 1792883 NP_864229.1 CDS RB1105 NC_005027.1 572251 572367 D hypothetical protein 572251..572367 Rhodopirellula baltica SH 1 1791488 NP_864230.1 CDS RB1106 NC_005027.1 572472 572615 D hypothetical protein 572472..572615 Rhodopirellula baltica SH 1 1796127 NP_864231.1 CDS RB1107 NC_005027.1 572592 572894 R hypothetical protein complement(572592..572894) Rhodopirellula baltica SH 1 1796568 NP_864232.1 CDS RB1109 NC_005027.1 573002 573817 R PMID: 8843436 best DB hits: BLAST: embl:CAB58265.1; (AL121849) multi-domain protein; E=2e-24 embl:CAB45032.1; (AL078635) large multi-functional; E=3e-24 pir:T36423; probable large, multifunctional secreted protein -; E=0.003; hypothetical protein complement(573002..573817) Rhodopirellula baltica SH 1 1795059 NP_864233.1 CDS RB1118 NC_005027.1 574507 574932 R PMID: 8905231 best DB hits: BLAST: pir:S75930; hypothetical protein - Synechocystis sp. (strain PCC; E=7e-09 pir:A57426; puc expression activator appA - Rhodobacter sphaeroides; E=4e-06 pir:H64861; hypothetical protein b1163 - Escherichia coli -----; E=3e-04; hypothetical protein complement(574507..574932) Rhodopirellula baltica SH 1 1795206 NP_864234.1 CDS RB1120 NC_005027.1 575033 576988 R PMID: 10984043 best DB hits: BLAST: pir:B83071; hypothetical protein PA4592 [imported] - Pseudomonas; E=1e-04 PFAM: PF02321; Outer membrane efflux protein; E=0.00035; hypothetical protein complement(575033..576988) Rhodopirellula baltica SH 1 1795029 NP_864235.1 CDS RB1122 NC_005027.1 576853 578202 R PMID: 8181764 best DB hits: BLAST: embl:CAA73293.1; (Y12758) prsE [Rhizobium leguminosarum]; E=3e-08 swissprot:P18790; HLYD_ACTAC LEUKOTOXIN SECRETION PROTEIN D; E=4e-08 embl:CAC06752.1; (AJ293261) protein transporter PrsE; E=2e-07 COG: PA1247; COG0845 Membrane-fusion protein; E=4e-08 aq_1060; COG1566 Multidrug resistance efflux pump; E=0.004; toxin secretion protein complement(576853..578202) Rhodopirellula baltica SH 1 1796489 NP_864236.1 CDS RB1125 NC_005027.1 578282 580393 R PMID: 8181764 best DB hits: BLAST: pir:H82381; toxin secretion ATP-binding protein VCA1084 [imported] -; E=2e-12 pir:S75806; hemolysin secretion protein hlyB - Synechocystis sp.; E=6e-12 gb:AAD21059.1; (AF119150) RtxB protein [Vibrio cholerae]; E=6e-12 COG: VCA1084; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain; E=2e-13 sll1180_2; COG2274 ABC-type bacteriocin/lantibiotic exporters,; E=5e-13 VC1448; COG1132 ABC-type multidrug/protein/lipid transport system,; E=6e-13 PFAM: PF00664; ABC transporter transmembrane re; E=0.046 PF00005; ABC transporter; E=6.8e-06; ABC transporter ATP-binding protein complement(578282..580393) Rhodopirellula baltica SH 1 1794405 NP_864237.1 CDS RB1129 NC_005027.1 580584 583271 R PMID: 10952301 best DB hits: BLAST: pir:H82182; conserved hypothetical protein VC1582 [imported] -; E=1e-112 pir:G70374; hypothetical protein aq_863 - Aquifex aeolicus -----; E=2e-70 pir:E69745; hypothetical protein ybcD - Bacillus subtilis -----; E=7e-63 COG: VC1582; COG3002 Uncharacterized BCR; E=1e-113; hypothetical protein complement(580584..583271) Rhodopirellula baltica SH 1 1797034 NP_864238.1 CDS RB1132 NC_005027.1 583247 583411 D hypothetical protein 583247..583411 Rhodopirellula baltica SH 1 1796465 NP_864239.1 CDS RB1133 NC_005027.1 583438 583629 R hypothetical protein complement(583438..583629) Rhodopirellula baltica SH 1 1795903 NP_864240.1 CDS ndhF NC_005027.1 583645 585258 R best DB hits: BLAST: pir:G82182; probable NADH dehydrogenase VC1581 [imported] - Vibrio; E=2e-42 gb:AAF27211.1; AF111731_1 (AF111731) NADH dehydrogenase [Ceiba; E=2e-39 gb:AAF27226.1; AF111746_1 (AF111746) NADH dehydrogenase; E=3e-39 COG: VC1581; COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L); E=1e-43 BS_shaA_1; COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain; E=1e-25 PFAM: PF00662; NADH-Ubiquinone oxidoreductase; E=0.0058 PF00361; NADH-Ubiquinone/plastoquinone; E=5.6e-38; NADH dehydrogenase complement(583645..585258) Rhodopirellula baltica SH 1 1795670 NP_864241.1 CDS RB1137 NC_005027.1 585204 585488 D hypothetical protein 585204..585488 Rhodopirellula baltica SH 1 1796290 NP_864242.1 CDS RB1138 NC_005027.1 585492 585959 D PMID: 8843436 best DB hits: BLAST: embl:CAC14481.1; (AL446003) hypothetical protein [Streptomyces; E=9e-15 pir:E64456; hypothetical protein MJ1254 - Methanococcus jannaschii; E=0.005 embl:CAC22761.1; (AL512944) hypothetical protein SC8D11.44c; E=0.035 PFAM: PF01037; AsnC family; E=0.66; hypothetical protein 585492..585959 Rhodopirellula baltica SH 1 1792621 NP_864243.1 CDS RB1140 NC_005027.1 586045 586680 R PMID: 7699720 best DB hits: BLAST: embl:CAA03999.1; (AJ000330) Styrene response regulator; E=3e-15 gb:AAC23717.1; (AF031161) transcriptional activator [Pseudomonas; E=3e-15 gb:AAG09418.1; AF180147_10 (AF180147) response regulator TobT; E=5e-15 COG: PA4196; COG2197 Response regulators consisting of a CheY-like; E=3e-15 ygeK; COG2771 DNA-binding HTH domains; E=6e-07 DR0987; COG2197 Response regulators consisting of a CheY-like; E=1e-06 PFAM: PF00072; Response regulator receiver doma; E=2.4e-10 PF00196; Bacterial regulatory proteins, l; E=6.2e-20; response regulator complement(586045..586680) Rhodopirellula baltica SH 1 1791000 NP_864244.1 CDS RB1142 NC_005027.1 586652 587080 R signal peptide complement(586652..587080) Rhodopirellula baltica SH 1 1795111 NP_864245.1 CDS RB1143 NC_005027.1 587083 587517 D hypothetical protein 587083..587517 Rhodopirellula baltica SH 1 1789946 NP_864246.1 CDS RB1144 NC_005027.1 587487 587672 R hypothetical protein complement(587487..587672) Rhodopirellula baltica SH 1 1795243 NP_864247.1 CDS RB1145 NC_005027.1 587652 588896 D PMID: 11823852 best DB hits: BLAST: pir:F83108; hypothetical protein PA4303 [imported] - Pseudomonas; E=0.26 gb:AAB90541.1; (AE001056) cell division inhibitor (minD-1); E=0.73 PFAM: PF00398; Ribosomal RNA adenine dimethylases; E=0.84; hypothetical protein 587652..588896 Rhodopirellula baltica SH 1 1794962 NP_864248.1 CDS RB1146 NC_005027.1 588871 588984 R hypothetical protein complement(588871..588984) Rhodopirellula baltica SH 1 1794250 NP_864249.1 CDS RB1147 NC_005027.1 589001 590377 D best DB hits: BLAST: gb:AAB36933.1; (U77780) secretory protein kinase [Chlorobium; E=1e-105 gb:AAF40195.1; AF229646_7 (AF229646) CpaF [Caulobacter crescentus]; E=2e-88 gb:AAG33866.1; AF317389_1 (AF317389) type IV NTPase; E=1e-86 COG: PA4302; COG0630 Predicted ATPases involved in pili and flagella; E=2e-79 PFAM: PF00004; ATPase associated with; E=0.16 PF01443; Viral (Superfamily 1) RNA hel; E=0.17 PF02223; Thymidylate kinase; E=0.69; secretory protein kinase 589001..590377 Rhodopirellula baltica SH 1 1793073 NP_864250.1 CDS tadB NC_005027.1 590374 591318 D PMID: 10880436 best DB hits: BLAST: gb:AAF40196.1; AF229646_8 (AF229646) TadB [Caulobacter crescentus]; E=9e-20 pir:D83108; hypothetical protein PA4301 [imported] - Pseudomonas; E=6e-11 embl:CAB92603.1; (AL356813) integral membrane protein; E=7e-06 COG: PA4301; COG2064 Predicted membrane protein; E=5e-12; hypothetical protein 590374..591318 Rhodopirellula baltica SH 1 1793240 NP_864251.1 CDS RB1149 NC_005027.1 591315 592256 D PMID: 8843436 best DB hits: BLAST: pir:C83108; hypothetical protein PA4300 [imported] - Pseudomonas; E=1e-08 embl:CAB92604.1; (AL356813) integral membrane protein; E=3e-06 gb:AAK02931.1; (AE006123) TadC [Pasteurella multocida]; E=2e-04 COG: PAB1458; COG2064 Predicted membrane protein; E=6e-05; hypothetical protein 591315..592256 Rhodopirellula baltica SH 1 1796602 NP_864252.1 CDS RB1153 NC_005027.1 592253 592717 D PMID: 11474104; signal peptide 592253..592717 Rhodopirellula baltica SH 1 1791833 NP_864253.1 CDS RB1154 NC_005027.1 592727 593200 D hypothetical protein 592727..593200 Rhodopirellula baltica SH 1 1789902 NP_864254.1 CDS RB1155 NC_005027.1 593310 593525 D hypothetical protein 593310..593525 Rhodopirellula baltica SH 1 1790792 NP_864255.1 CDS RB1156 NC_005027.1 593491 595290 D hypothetical protein 593491..595290 Rhodopirellula baltica SH 1 1797085 NP_864256.1 CDS RB1161 NC_005027.1 595387 597297 R best DB hits: BLAST: pir:T35404; probable squalene-hopene cyclase - Streptomyces; E=0.035 ddbj:BAB09653.1; (AB016881) gene_id:MXC17.10~unknown protein; E=0.073 gb:AAF80384.1; AF159949_1 (AF159949) cycloartenol synthase; E=0.79; squalene-hopene cyclase complement(595387..597297) Rhodopirellula baltica SH 1 1792367 NP_864257.1 CDS exbD NC_005027.1 597316 597714 R PMID: 2670903 PMID: 10517598 best DB hits: BLAST: gb:AAC78852.1; (AF087669) ExbD [Bordetella bronchiseptica]; E=1e-06 pir:T44783; exbD protein [imported] - Bordetella pertussis -----; E=3e-06 pir:A71687; tolR protein (tolR) RP310 - Rickettsia prowazekii; E=3e-06 COG: RP310; COG0848 Biopolymer transport protein; E=4e-07 PFAM: PF02472; Biopolymer transport protein ExbD/To; E=4.1e-10; biopolymer transport ExbD protein complement(597316..597714) Rhodopirellula baltica SH 1 1790788 NP_864258.1 CDS exbB NC_005027.1 597714 598769 R PMID: 8437515 best DB hits: BLAST: pir:D82726; conserved hypothetical protein XF1079 [imported] -; E=8e-21 pir:G83274; probable tolQ-type transport protein PA2983 [imported] -; E=4e-19 embl:CAB50918.1; (AJ243354) hypothetical protein [Pseudomonas; E=8e-16 COG: XF1079; COG0811 Biopolymer transport proteins; E=8e-22 PFAM: PF01618; MotA/TolQ/ExbB proton channel famil; E=3.1e-21; biopolymer transport ExbB-related protein complement(597714..598769) Rhodopirellula baltica SH 1 1790385 NP_864259.1 CDS RB1168 NC_005027.1 598766 600994 R best DB hits: BLAST: pir:B81428; probable periplasmic protein Cj0114 [imported] -; E=0.62; hypothetical protein complement(598766..600994) Rhodopirellula baltica SH 1 1793227 NP_864260.1 CDS degT NC_005027.1 600826 602079 R PMID: 2104607 best DB hits: BLAST: swissprot:P15263; DEGT_BACST PLEIOTROPIC REGULATORY PROTEIN; E=2e-80 ddbj:BAA31964.1; (D64132) A porR mutant of Pophyromonas; E=3e-68 pir:D69025; pleiotropic regulatory protein DegT - Methanobacterium; E=2e-67 COG: MTH1188; COG0399 Predicted pyridoxal phosphate-dependent enzyme; E=2e-68 PFAM: PF01041; DegT/DnrJ/EryC1/StrS family; E=1.2e-146; pleiotropic regulatory protein complement(600826..602079) Rhodopirellula baltica SH 1 1791122 NP_864261.1 CDS RB1172 NC_005027.1 602343 602987 R hypothetical protein complement(602343..602987) Rhodopirellula baltica SH 1 1796165 NP_864262.1 CDS RB1174 NC_005027.1 603031 603498 D signal peptide 603031..603498 Rhodopirellula baltica SH 1 1794873 NP_864263.1 CDS RB1175 NC_005027.1 603172 603621 R hypothetical protein complement(603172..603621) Rhodopirellula baltica SH 1 1790447 NP_864264.1 CDS RB1178 NC_005027.1 603844 604059 R PMID: 7492116 best DB hits: BLAST: ddbj:BAB12601.1; (AP002527) The peptide is not translated beyond; E=1e-04 gb:AAK01408.1; AF324211_1 (AF324211) site-specific tyrosine; E=2e-04 pir:C82476; site-specific recombinase IntI4 VCA0291 [imported] -; E=2e-04 COG: VCA0291; COG0582 Integrase; E=3e-05 PFAM: PF00589; Phage integrase; E=0.02; integrase complement(603844..604059) Rhodopirellula baltica SH 1 1795540 NP_864265.1 CDS RB1179 NC_005027.1 603998 604384 D hypothetical protein 603998..604384 Rhodopirellula baltica SH 1 1789912 NP_864266.1 CDS RB1180 NC_005027.1 604378 604656 D hypothetical protein 604378..604656 Rhodopirellula baltica SH 1 1790144 NP_864267.1 CDS RB1182 NC_005027.1 604706 604972 D hypothetical protein 604706..604972 Rhodopirellula baltica SH 1 1795548 NP_864268.1 CDS RB1183 NC_005027.1 605059 605553 D hypothetical protein 605059..605553 Rhodopirellula baltica SH 1 1795735 NP_864269.1 CDS RB1184 NC_005027.1 605675 605971 R hypothetical protein complement(605675..605971) Rhodopirellula baltica SH 1 1793125 NP_864270.1 CDS RB1185 NC_005027.1 605975 606781 R PMID: 1646375 best DB hits: BLAST: prf:2115270C; transposase [Weeksella zoohelcum]; E=1e-16 swissprot:P55631; Y4QJ_RHISN TRANSPOSASE Y4QJ -----; E=7e-11 swissprot:P24607; T801_PSESH TRANSPOSASE FOR INSERTION SEQUENCE; E=0.38 PFAM: PF01096; Transcription factor S-II (TFIIS); E=0.19; transposase complement(605975..606781) Rhodopirellula baltica SH 1 1790201 NP_864271.1 CDS RB1189 NC_005027.1 606838 607128 D PMID: 2824781 best DB hits: BLAST: gb:AAG58100.1; AE005527_3 (AE005527) unknown protein encoded by; E=0.002 gb:AAG53987.1; AF327445_1 (AF327445) transposase A; E=0.003 gb:AAF28119.1; AF153317_15 (AF153317) InsA [Shigella; E=0.007 COG: PA1937; COG2963 Transposase; E=0.004 PFAM: PF01381; Helix-turn-helix; E=0.53 PF01527; Transposase; E=6.1e-18; transposase A 606838..607128 Rhodopirellula baltica SH 1 1794703 NP_864272.1 CDS RB1190 NC_005027.1 607131 608009 D PMID: 7496528 best DB hits: BLAST: gb:AAA88919.1; (U13013) ORFB [Leptospira interrogans]; E=3e-47 gb:AAA88916.1; (U13012) ORFB [Leptospira interrogans]; E=1e-46 gb:AAC05649.1; (AF038931) probable transposase-related protein; E=1e-45 COG: DRB0019.2; COG2801 transposase; E=1e-35 PFAM: PF00665; Integrase core domain; E=4.8e-40; transposase 607131..608009 Rhodopirellula baltica SH 1 1794928 NP_864273.1 CDS RB1191 NC_005027.1 608055 608435 R best DB hits: BLAST: swissprot:P55631; Y4QJ_RHISN TRANSPOSASE Y4QJ -----; E=4e-14 prf:2115270C; transposase [Weeksella zoohelcum]; E=2e-10 pir:S49612; transposase - Escherichia coli; E=0.001; transposase complement(608055..608435) Rhodopirellula baltica SH 1 1796749 NP_864274.1 CDS RB1192 NC_005027.1 608450 609496 R PMID: 9082984 best DB hits: BLAST: swissprot:P55632; Y4QK_RHISN INTEGRASERECOMBINASE Y4QK; E=5e-39 swissprot:P55429; Y4EF_RHISN INTEGRASERECOMBINASE Y4EF; E=1e-32 prf:2115270D; integrase [Weeksella zoohelcum]; E=1e-22 COG: PAB0255; COG0582 Integrase; E=3e-21 PFAM: PF02899; Phage integrase, N-terminal S; E=0.087 PF00589; Phage integrase; E=8e-31; integrase complement(608450..609496) Rhodopirellula baltica SH 1 1794402 NP_864275.1 CDS RB1193 NC_005027.1 609563 609694 R hypothetical protein complement(609563..609694) Rhodopirellula baltica SH 1 1794242 NP_864276.1 CDS RB1194 NC_005027.1 609661 610227 R hypothetical protein complement(609661..610227) Rhodopirellula baltica SH 1 1793293 NP_864277.1 CDS RB1196 NC_005027.1 610360 610857 D PMID: 11792869 best DB hits: BLAST: pir:S56597; peptide N-acetyltransferase (EC 2.3.1.-) rimI -; E=0.018 swissprot:P09453; RIMI_ECOLI RIBOSOMAL-PROTEIN-ALANINE; E=0.018 pir:G69233; N-terminal acetyltransferase complex, subunit ARD1 -; E=0.043 COG: rimI; COG0456 Acetyltransferases; E=0.002 DR0188; COG0454 Histone acetyltransferase HPA2 and related; E=0.007 PFAM: PF00583; Acetyltransferase (GNAT) family; E=1e-16; ribosomal-protein-alanine acetyltransferase 610360..610857 Rhodopirellula baltica SH 1 1796297 NP_864278.1 CDS RB1198 NC_005027.1 610941 611396 D signal peptide 610941..611396 Rhodopirellula baltica SH 1 1793553 NP_864279.1 CDS RB1199 NC_005027.1 611479 612024 D PMID: 10567266 best DB hits: BLAST: pir:C75507; hypothetical protein - Deinococcus radiodurans (strain; E=0.44; type IV pilin-like protein 611479..612024 Rhodopirellula baltica SH 1 1795171 NP_864280.1 CDS RB1200 NC_005027.1 612144 612635 D signal peptide 612144..612635 Rhodopirellula baltica SH 1 1791735 NP_864281.1 CDS RB1201 NC_005027.1 612629 612754 R hypothetical protein complement(612629..612754) Rhodopirellula baltica SH 1 1794338 NP_864282.1 CDS RB1202 NC_005027.1 612786 613154 D PMID: 10496929 best DB hits: BLAST: gb:AAG56925.1; AE005414_2 (AE005414) IS30 transposase encoded; E=1e-10 ddbj:BAA84890.1; (AB024946) Transposase [Escherichia coli]; E=2e-10 pir:S28740; probable transposase (insertion sequence IS30) -; E=2e-10 COG: tra8_g1; COG2826 Transposase, IS30 family; E=2e-11 PFAM: PF01325; Iron dependent repressor, N-t; E=0.17 PF01381; Helix-turn-helix; E=0.086 PF01047; MarR family; E=0.42; transposase 612786..613154 Rhodopirellula baltica SH 1 1793944 NP_864283.1 CDS RB1203 NC_005027.1 613202 613408 R hypothetical protein complement(613202..613408) Rhodopirellula baltica SH 1 1796732 NP_864284.1 CDS RB1204 NC_005027.1 613431 613703 R hypothetical protein complement(613431..613703) Rhodopirellula baltica SH 1 1789997 NP_864285.1 CDS RB1205 NC_005027.1 613667 615037 R PMID: 93315172 best DB hits: BLAST: gb:AAA37880.1; (L07921) iduronate sulfatase [Mus musculus]; E=1e-36 gb:AAA16877.1; (L13329) iduronate-2-sulfatase [Homo sapiens]; E=2e-35 gb:AAB33747.1; iduronate-2-sulfatase, IDS {EC 3.1.6.13} [human,; E=1e-34 COG: PA0031; COG3119 Arylsulfatase A and related enzymes; E=5e-29 PA1689; COG1368 Phosphoglycerol transferase and related proteins,; E=2e-04 PFAM: PF00884; Sulfatase; E=1.4e-18; iduronate sulfatase complement(613667..615037) Rhodopirellula baltica SH 1 1793421 NP_864286.1 CDS RB1208 NC_005027.1 615506 616456 D signal peptide 615506..616456 Rhodopirellula baltica SH 1 1791724 NP_864287.1 CDS sgaU NC_005027.1 616571 617416 R PMID: 7610040 best DB hits: BLAST: swissprot:Q58707; YD11_METJA HYPOTHETICAL PROTEIN MJ1311 -----; E=0.004 swissprot:P39305; SGAU_ECOLI HEXULOSE-6-PHOSPHATE; E=0.004 gb:AAG59393.1; AE005652_10 (AE005652) ; E=0.004 COG: MJ1311; COG1082 Predicted endonucleases; E=4e-04 PFAM: PF02199; Saposin A-type domain; E=0.63; hexulose-6-phosphate isomerase complement(616571..617416) Rhodopirellula baltica SH 1 1792653 NP_864288.1 CDS RB1211 NC_005027.1 617437 617550 D hypothetical protein 617437..617550 Rhodopirellula baltica SH 1 1790195 NP_864289.1 CDS mgtE NC_005027.1 617517 618866 R PMID: 8905231 best DB hits: BLAST: pir:S77552; Mg2+ transport protein - Synechocystis sp. (strain PCC; E=8e-53 pir:B71265; probable Mg2+ transport protein (mgtE) - syphilis; E=2e-51 pir:G72287; hypothetical protein TM1161 - Thermotoga maritima; E=4e-49 COG: slr1216; COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain); E=7e-54 MTH855_2; COG0517 CBS domains; E=7e-09 PFAM: PF00571; CBS domain; E=0.0001 PF01769; Divalent cation transporter; E=6.8e-26; Mg2+ transport protein complement(617517..618866) Rhodopirellula baltica SH 1 1792695 NP_864290.1 CDS efp NC_005027.1 618945 619532 R elongation factor P complement(618945..619532) Rhodopirellula baltica SH 1 1793094 NP_864291.1 CDS kamA NC_005027.1 619560 620705 D best DB hits: BLAST: pir:C82554; conserved hypothetical protein XF2474 [imported] -; E=7e-72 gb:AAG59345.1; AE005648_7 (AE005648) orf, hypothetical protein; E=4e-70 swissprot:P39280; YJEK_ECOLI HYPOTHETICAL 38.7 KD PROTEIN IN; E=1e-67 COG: XF2474; COG1509 Lysine 2,3-aminomutase; E=7e-73 PFAM: PF02587; Uncharacterized ACR, YjeK family COG; E=6e-109; L-lysine 2,3-aminomutase 619560..620705 Rhodopirellula baltica SH 1 1794648 NP_864292.1 CDS RB1216 NC_005027.1 620722 622605 D PMID: 9403685 best DB hits: BLAST: pir:H70193; membrane spanning protein homolog - Lyme disease; E=6e-04 gb:AAD39630.1; AF033858_13 (AF033858) ABC transporter; E=0.074 pir:D69049; conserved hypothetical protein MTH1371 -; E=0.15 COG: BB0753; COG1277 Permease component of an ABC-transporter; E=5e-05; ABC transporter permease 620722..622605 Rhodopirellula baltica SH 1 1795079 NP_864293.1 CDS galM NC_005027.1 622840 623925 D PMID: 3531172 best DB hits: BLAST: swissprot:P05149; GALM_ACICA ALDOSE 1-EPIMERASE PRECURSOR; E=4e-63 embl:CAB62739.1; (AL133423) aldose 1-epimerase; E=3e-62 pir:H72395; probable aldose 1-epimerase (EC 5.1.3.3) - Thermotoga; E=5e-62 COG: TM0282; COG2017 Galactose mutarotase and related enzymes; E=4e-63 PFAM: PF01263; Aldose 1-epimerase; E=1.4e-102; aldose 1-epimerase 622840..623925 Rhodopirellula baltica SH 1 1790949 NP_864294.1 CDS RB1222 NC_005027.1 623906 624094 D hypothetical protein 623906..624094 Rhodopirellula baltica SH 1 1793304 NP_864295.1 CDS RB1223 NC_005027.1 624091 624312 D hypothetical protein 624091..624312 Rhodopirellula baltica SH 1 1794443 NP_864296.1 CDS RB1224 NC_005027.1 624415 624528 D hypothetical protein 624415..624528 Rhodopirellula baltica SH 1 1794682 NP_864297.1 CDS dpp4 NC_005027.1 624513 627017 R PMID: 7793970 best DB hits: BLAST: pir:S66261; X-Pro dipeptidyl-peptidase (EC 3.4.14.11) -; E=6e-59 ddbj:BAA28265.1; (AB008194) DPP IV [Porphyromonas gingivalis]; E=2e-54 gb:AAC46184.1; (AF026511) dipeptidyl peptidase IV [Porphyromonas; E=7e-54 COG: YHR028c; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; E=2e-30 BH0879; COG2267 Lysophospholipase; E=0.002 PH0863; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; E=0.002 PFAM: PF00930; Dipeptidyl peptidase IV (DPP IV); E=5.3e-44 PF00326; Prolyl oligopeptidase; E=0.84; dipeptidyl peptidase IV complement(624513..627017) Rhodopirellula baltica SH 1 1794490 NP_864298.1 CDS RB1230 NC_005027.1 626975 627328 R hypothetical protein complement(626975..627328) Rhodopirellula baltica SH 1 1790367 NP_864299.1 CDS lpd NC_005027.1 627346 628773 R PMID: 6352260 PMID: 2211531 best DB hits: BLAST: pir:A82753; dihydrolipoamide dehydrogenase XF0868 [imported] -; E=1e-102 swissprot:O50286; DLDH_VIBPA DIHYDROLIPOAMIDE DEHYDROGENASE (E3; E=1e-102 swissprot:P00391; DLDH_ECOLI DIHYDROLIPOAMIDE DEHYDROGENASE (E3; E=1e-101 COG: XF0868_2; COG1249 Dihydrolipoamide dehydrogenase/glutathione; E=1e-103 PFAM: PF02032; Phytoene dehydrogenase related; E=0.00021 PF00070; Pyridine nucleotide-disulphide; E=2.6e-75 PF02852; Pyridine nucleotide-disulphide; E=8.6e-41; dihydrolipoamide dehydrogenase complement(627346..628773) Rhodopirellula baltica SH 1 1794899 NP_864300.1 CDS RB1232 NC_005027.1 628776 628901 D hypothetical protein 628776..628901 Rhodopirellula baltica SH 1 1792915 NP_864301.1 CDS rpsD NC_005027.1 628870 629490 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(628870..629490) Rhodopirellula baltica SH 1 1793948 NP_864302.1 CDS RB1235 NC_005027.1 629787 631169 R PMID: 10192928 best DB hits: BLAST: ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=1e-11 gb:AAC23913.1; (AF039207) NADH-dependent dehydrogenase homolog; E=2e-10 pir:G72391; conserved hypothetical protein - Thermotoga maritima; E=6e-08 COG: BH1248; COG0673 Predicted dehydrogenases and related proteins; E=1e-12 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=9.8e-25; NADH-dependent dehydrogenase complement(629787..631169) Rhodopirellula baltica SH 1 1793366 NP_864303.1 CDS RB1237 NC_005027.1 631142 631471 R hypothetical protein complement(631142..631471) Rhodopirellula baltica SH 1 1794585 NP_864304.1 CDS RB1238 NC_005027.1 631540 632046 R PMID: 9753770 best DB hits: BLAST: gb:AAC36151.1; (U58977) Notch homolog Scalloped wings [Lucilia; E=0.30; notch-like protein complement(631540..632046) Rhodopirellula baltica SH 1 1792040 NP_864305.1 CDS RB1239 NC_005027.1 632033 632500 R hypothetical protein complement(632033..632500) Rhodopirellula baltica SH 1 1793898 NP_864306.1 CDS RB1240 NC_005027.1 632546 634060 R best DB hits: BLAST: embl:CAB94634.1; (AL359215) secreted glycosyl hydrolase.; E=0.005 pir:D83161; hypothetical protein PA3885 [imported] - Pseudomonas; E=0.010 pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=0.37 COG: PA3885; COG2365 Protein tyrosine/serine phosphatase; E=0.001 PFAM: PF00239; Resolvase class of site-specific re; E=0.14; secreted glycosyl hydrolase complement(632546..634060) Rhodopirellula baltica SH 1 1796002 NP_864307.1 CDS RB1246 NC_005027.1 634145 634567 R hypothetical protein complement(634145..634567) Rhodopirellula baltica SH 1 1796535 NP_864308.1 CDS RB1248 NC_005027.1 634500 635303 D PMID: 7476193 best DB hits: BLAST: pir:S76626; ABC-type transport protein sll0489 - Synechocystis sp.; E=2e-52 pir:A83142; probable ATP-binding component of ABC transporter PA4037; E=6e-50 pir:T44443; gliding motility protein [imported] - Flavobacterium; E=1e-49 COG: sll0489; COG1131 ABC-type multidrug transport system, ATPase; E=2e-53 ybhF; COG1131 ABC-type multidrug transport system, ATPase component; E=1e-33 VNG1893G; COG1131 ABC-type multidrug transport system, ATPase; E=2e-33 PFAM: PF00005; ABC transporter; E=9.2e-47; ABC-type multidrug transport system, ATPase component 634500..635303 Rhodopirellula baltica SH 1 1795133 NP_864309.1 CDS RB1250 NC_005027.1 635417 638389 D PMID: 10984043 best DB hits: BLAST: pir:B83188; probable permease of ABC transporter PA3671 [imported] -; E=7e-21 pir:B83142; hypothetical protein PA4038 [imported] - Pseudomonas; E=3e-17 pir:H70193; membrane spanning protein homolog - Lyme disease; E=1e-12 COG: PA3671; COG1277 Permease component of an ABC-transporter; E=6e-22 PA4039; COG3225 Uncharacterized BCR; E=1e-04 PH1531; COG1668 ATP-dependent Na+ efflux pump membrane component; E=0.002; ABC transporter permease 635417..638389 Rhodopirellula baltica SH 1 1795894 NP_864310.1 CDS RB1252 NC_005027.1 638429 640426 D best DB hits: BLAST: pir:H83187; hypothetical protein PA3669 [imported] - Pseudomonas; E=0.14; hypothetical protein 638429..640426 Rhodopirellula baltica SH 1 1791391 NP_864311.1 CDS RB1254 NC_005027.1 640610 640747 D hypothetical protein 640610..640747 Rhodopirellula baltica SH 1 1790764 NP_864312.1 CDS RB1255 NC_005027.1 640755 640910 R hypothetical protein complement(640755..640910) Rhodopirellula baltica SH 1 1794779 NP_864313.1 CDS RB1256 NC_005027.1 640889 641044 R hypothetical protein complement(640889..641044) Rhodopirellula baltica SH 1 1795084 NP_864314.1 CDS RB1257 NC_005027.1 641119 642246 R PMID: 10470850 best DB hits: BLAST: ddbj:BAB09588.1; (AB018118) gene_id:MRI1.6~pir D64592~similar to; E=1e-46; hypothetical protein complement(641119..642246) Rhodopirellula baltica SH 1 1790238 NP_864315.1 CDS RB1258 NC_005027.1 642250 642486 R hypothetical protein complement(642250..642486) Rhodopirellula baltica SH 1 1795141 NP_864316.1 CDS RB1259 NC_005027.1 642452 642631 D hypothetical protein 642452..642631 Rhodopirellula baltica SH 1 1791230 NP_864317.1 CDS RB1260 NC_005027.1 642702 643742 D signal peptide 642702..643742 Rhodopirellula baltica SH 1 1794697 NP_864318.1 CDS dnaE NC_005027.1 643894 647331 R PMID: 3316192 best DB hits: BLAST: pir:F83561; probable DNA polymerase alpha chain PA0669 [imported] -; E=0.0 pir:A70972; probable DNA polymerase III alpha chain - Mycobacterium; E=1e-176 swissprot:O34623; DP3A_BACSU DNA POLYMERASE III, ALPHA CHAIN -----; E=1e-108 COG: PA0669; COG0587 DNA polymerase III alpha subunit; E=0.0 PFAM: PF02231; PHP domain N-terminal region; E=3.3e-19 PF01336; OB-fold nucleic acid binding domain; E=6.8e-05; DNA polymerase III alpha subunit complement(643894..647331) Rhodopirellula baltica SH 1 1791510 NP_864319.1 CDS RB1263 NC_005027.1 647136 648260 D PMID: 8355615 best DB hits: BLAST: pir:C72038; conserved hypothetical protein CP1104 [imported] -; E=1e-31 swissprot:P45672; NIR3_AZOBR NIFR3-LIKE PROTEIN ----- pir:; E=2e-31 pir:A81750; NifR3Smm1 family protein TC0013 [imported] - Chlamydia; E=1e-30 COG: CPn0768; COG0042 Predicted TIM-barrel enzymes, possibly; E=1e-32 yhdG; COG0042 Predicted TIM-barrel enzymes, possibly dehydrogenases,; E=1e-23 Cj0123c; COG0042 Predicted TIM-barrel enzymes, possibly; E=8e-23 PFAM: PF01207; Uncharacterized protein famil; E=5.7e-62; NifR3 family protein 647136..648260 Rhodopirellula baltica SH 1 1793671 NP_864320.1 CDS RB1266 NC_005027.1 648505 648804 R hypothetical protein complement(648505..648804) Rhodopirellula baltica SH 1 1793121 NP_864321.1 CDS RB1269 NC_005027.1 648801 649412 R hypothetical protein complement(648801..649412) Rhodopirellula baltica SH 1 1795869 NP_864322.1 CDS RB1270 NC_005027.1 649173 649637 D PMID: 9634230 best DB hits: BLAST: pir:G70790; probable transcriptional regulator Rv3678c - Mycobacterium; E=5e-20 pir:T36560; hypothetical protein SCH17.09c - Streptomyces coelicolor; E=6e-18 embl:CAB62819.1; (AL133436) hypothetical protein L7276.02; E=4e-17 COG: Rv3678c; COG0251 translation initiation inhibitor; E=5e-21 PFAM: PF01042; YjgF family; E=0.22; translation initiation inhibitor 649173..649637 Rhodopirellula baltica SH 1 1793796 NP_864323.1 CDS RB1272 NC_005027.1 649696 650688 D hypothetical protein 649696..650688 Rhodopirellula baltica SH 1 1793636 NP_864324.1 CDS RB1274 NC_005027.1 650886 652316 D PMID: 10360571 best DB hits: BLAST: pir:D72379; hypothetical protein TM0428 - Thermotoga maritima; E=5e-56 pir:H75303; probable NADH-dependent flavin oxidoreductase -; E=3e-11 ddbj:BAB05200.1; (AP001512) NADH oxidase [Bacillus halodurans]; E=4e-09 COG: TM0428; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme; E=4e-57 nemA; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family; E=3e-08 PA2932; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme; E=6e-08 PFAM: PF00724; NADH:flavin oxidoreductase / NAD; E=2.5e-08; NADH:flavin oxidoreductase 650886..652316 Rhodopirellula baltica SH 1 1791321 NP_864325.1 CDS RB1275 NC_005027.1 652320 652544 R hypothetical protein complement(652320..652544) Rhodopirellula baltica SH 1 1791121 NP_864326.1 CDS RB1276 NC_005027.1 652505 652696 R hypothetical protein complement(652505..652696) Rhodopirellula baltica SH 1 1790070 NP_864327.1 CDS RB1277 NC_005027.1 652712 653143 D signal peptide 652712..653143 Rhodopirellula baltica SH 1 1794453 NP_864328.1 CDS RB1279 NC_005027.1 653260 653697 D best DB hits: BLAST: gb:AAF35906.1; AF232672_1 (AF232672) FK506-binding protein; E=7e-06 pir:A83180; probable peptidyl-prolyl cis-trans isomerase,; E=3e-04 prf:2204313A; FK506-binding protein 65kD [Mus musculus]; E=9e-04 COG: PA3717; COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1; E=3e-05 PFAM: PF00254; FKBP-type peptidyl-prolyl cis-trans; E=6.8e-10; peptidyl-prolyl cis-trans isomerase, FkbP-type 653260..653697 Rhodopirellula baltica SH 1 1793315 NP_864329.1 CDS RB1281 NC_005027.1 653595 654287 D PMID: 10747959; hypothetical protein 653595..654287 Rhodopirellula baltica SH 1 1792970 NP_864330.1 CDS RB1284 NC_005027.1 654412 654585 D PMID: 8108379 PMID: 9665876 best DB hits: BLAST: pir:H71274; probable ankyrin - syphilis spirochete ----- gb:; E=0.37 gb:AAF49554.1; (AE003529) CG6017 gene product [Drosophila; E=0.43 gb:AAC26848.1; (AF049612) huntingtin interacting protein HYPH; E=0.45 PFAM: PF00023; Ank repeat; E=0.052; ankyrin protein 654412..654585 Rhodopirellula baltica SH 1 1792541 NP_864331.1 CDS RB1286 NC_005027.1 654569 655774 R PMID: 10708371 best DB hits: BLAST: gb:AAG55028.1; AE005248_9 (AE005248) receptor; E=4e-62 swissprot:P28917; YDCC_ECOLI H REPEAT-ASSOCIATED PROTEIN IN; E=5e-62 gb:AAG54539.1; AE005200_1 (AE005200) Z0271 gene product; E=9e-62 PFAM: PF01811; Transposase; E=5.2e-67; transposase complement(654569..655774) Rhodopirellula baltica SH 1 1794598 NP_864332.1 CDS RB1288 NC_005027.1 655835 656134 D PMID: 10731132 PMID: 8108379 best DB hits: BLAST: gb:AAF49247.1; (AE003519) CG6896 gene product [Drosophila; E=9e-06 gb:AAF49547.1; (AE003528) CG5891 gene product [Drosophila; E=2e-04 gb:AAB86895.1; (AF034547) protein phosphatase M130 myosin; E=0.006 PFAM: PF00023; Ank repeat; E=5.1e-06; hypothetical protein 655835..656134 Rhodopirellula baltica SH 1 1796306 NP_864333.1 CDS RB1289 NC_005027.1 656235 656687 D hypothetical protein 656235..656687 Rhodopirellula baltica SH 1 1795861 NP_864334.1 CDS RB1291 NC_005027.1 656684 656977 D hypothetical protein 656684..656977 Rhodopirellula baltica SH 1 1795622 NP_864335.1 CDS RB1294 NC_005027.1 657051 657236 R hypothetical protein complement(657051..657236) Rhodopirellula baltica SH 1 1794780 NP_864336.1 CDS RB1297 NC_005027.1 657348 657866 D signal peptide 657348..657866 Rhodopirellula baltica SH 1 1795162 NP_864337.1 CDS RB1299 NC_005027.1 657875 658102 D hypothetical protein 657875..658102 Rhodopirellula baltica SH 1 1790852 NP_864338.1 CDS RB1300 NC_005027.1 658168 658959 D hypothetical protein 658168..658959 Rhodopirellula baltica SH 1 1790029 NP_864339.1 CDS RB1301 NC_005027.1 658948 659157 R hypothetical protein complement(658948..659157) Rhodopirellula baltica SH 1 1793345 NP_864340.1 CDS RB1302 NC_005027.1 659166 659762 D hypothetical protein 659166..659762 Rhodopirellula baltica SH 1 1792346 NP_864341.1 CDS RB1304 NC_005027.1 659778 660044 D hypothetical protein 659778..660044 Rhodopirellula baltica SH 1 1791118 NP_864342.1 CDS RB1305 NC_005027.1 660019 660810 D hypothetical protein 660019..660810 Rhodopirellula baltica SH 1 1794241 NP_864343.1 CDS RB1308 NC_005027.1 660807 662321 D PMID: 2263648 best DB hits: BLAST: gb:AAF63149.1; AC011001_19 (AC011001) Similar to phytoene; E=1e-09 swissprot:P22871; CRTI_ERWHE PHYTOENE DEHYDROGENASE (PHYTOENE; E=4e-05 gb:AAA64981.1; (M87280) phytoene dehydrogenase [Erwinia; E=4e-05 COG: BH1848; COG1233 Phytoene dehydrogenase and related proteins; E=6e-06 PFAM: PF01134; Glucose inhibited division prot; E=0.017 PF01593; Flavin containing amine oxidase; E=0.08 PF00732; GMC oxidoreductases; E=0.049; phytoene dehydrogenase 660807..662321 Rhodopirellula baltica SH 1 1794055 NP_864344.1 CDS RB1310 NC_005027.1 662318 663079 D PMID: 2229036 best DB hits: BLAST: pir:B72334; ABC transporter ATP-binding protein - Thermotoga; E=8e-34 gb:AAG19180.1; (AE005015) ABC transporter ATP-binding protein; E=4e-33 embl:CAC11214.1; (AL445063) gliding motility protein (gldA); E=5e-33 COG: TM0793; COG1131 ABC-type multidrug transport system, ATPase; E=8e-35 ybhF; COG1131 ABC-type multidrug transport system, ATPase component; E=1e-26 PFAM: PF00448; SRP54-type protein, GTPase do; E=0.0013 PF00005; ABC transporter; E=6.1e-52; ABC-type multidrug transport system, ATPase component 662318..663079 Rhodopirellula baltica SH 1 1791403 NP_864345.1 CDS RB1311 NC_005027.1 663076 664746 D hypothetical protein 663076..664746 Rhodopirellula baltica SH 1 1796537 NP_864346.1 CDS RB1316 NC_005027.1 664924 665478 D best DB hits: PFAM: PF00672; HAMP domain; E=0.45; signal peptide 664924..665478 Rhodopirellula baltica SH 1 1793477 NP_864347.1 CDS leuA NC_005027.1 665572 667164 D catalyzes the formation of 2-isopropylmalate from 1-methyl-2-oxobutanoate and acetyl-CoA; alpha-isopropylmalate synthase 665572..667164 Rhodopirellula baltica SH 1 1796538 NP_864348.1 CDS valS NC_005027.1 667248 670370 D PMID: 3275660 best DB hits: BLAST: swissprot:Q55522; SYV_SYNY3 VALYL-TRNA SYNTHETASE (VALINE--TRNA; E=0.0 swissprot:Q05873; SYV_BACSU VALYL-TRNA SYNTHETASE (VALINE--TRNA; E=0.0 pir:SYBSVS; valine--tRNA ligase (EC 6.1.1.9) - Bacillus; E=0.0 COG: slr0557; COG0525 Valyl-tRNA synthetase; E=0.0 PFAM: PF00133; tRNA synthetases class I (I, L, M; E=5.3e-75; valyl-tRNA synthetase 667248..670370 Rhodopirellula baltica SH 1 1790563 NP_864349.1 CDS RB1321 NC_005027.1 670478 671455 D PMID: 7952186 best DB hits: BLAST: pir:T35673; probable transcription repressor - Streptomyces; E=2e-13 ddbj:BAB04813.1; (AP001510) transcriptional repressor of the; E=1e-12 ddbj:BAB04516.1; (AP001509) glucose kinase [Bacillus halodurans]; E=5e-11 COG: BH1094; COG1940 Transcriptional regulators; E=1e-13 PFAM: PF00370; FGGY family of carbohydrate kinases,; E=0.8 PF00480; ROK family; E=3.6e-25; transcription repressor 670478..671455 Rhodopirellula baltica SH 1 1793925 NP_864350.1 CDS RB1322 NC_005027.1 671526 671633 D hypothetical protein 671526..671633 Rhodopirellula baltica SH 1 1790333 NP_864351.1 CDS RB1323 NC_005027.1 671656 672945 R PMID: 9529885 best DB hits: BLAST: pir:A83308; probable MFS transporter PA2701 [imported] - Pseudomonas; E=1e-60 pir:T50939; DitE protein [imported] - Pseudomonas abietaniphila; E=4e-46 pir:H83212; conserved hypothetical protein PA3465 [imported] -; E=1e-42 COG: PA2701; COG0477 Permeases of the major facilitator superfamily; E=1e-61; MFS family transporter complement(671656..672945) Rhodopirellula baltica SH 1 1796527 NP_864352.1 CDS RB1324 NC_005027.1 672936 673169 R hypothetical protein complement(672936..673169) Rhodopirellula baltica SH 1 1792504 NP_864353.1 CDS RB1325 NC_005027.1 673181 674032 D PMID: 2229036 best DB hits: BLAST: pir:S76626; ABC-type transport protein sll0489 - Synechocystis sp.; E=2e-36 gb:AAK06094.1; AE006429_12 (AE006429) ABC transporter ATP binding; E=8e-33 gb:AAG19180.1; (AE005015) ABC transporter ATP-binding protein; E=1e-32 COG: sll0489; COG1131 ABC-type multidrug transport system, ATPase; E=2e-37 PFAM: PF00448; SRP54-type protein, GTPase domai; E=0.041 PF00693; Thymidine kinase from herpesviru; E=0.88 PF01078; Magnesium chelatase, subunit Chl; E=0.8; multidrug ABC transporter ATPase 673181..674032 Rhodopirellula baltica SH 1 1792681 NP_864354.1 CDS RB1326 NC_005027.1 674029 675825 D hypothetical protein 674029..675825 Rhodopirellula baltica SH 1 1792602 NP_864355.1 CDS RB1329 NC_005027.1 675932 677347 R PMID: 8759852 best DB hits: BLAST: gb:AAC77833.1; (U38473) outer membrane lipoprotein; E=2e-07 gb:AAG24804.1; (AF285085) outer membrane lipoprotein; E=4e-07 swissprot:P76388; WZA_ECOLI POLYSACCHARIDE EXPORT PROTEIN; E=5e-07 COG: wza; COG1596 Periplasmic protein involved in polysaccharide export; E=5e-08 aq_505; COG1596 Periplasmic protein involved in polysaccharide; E=5e-06; polysaccharide export protein complement(675932..677347) Rhodopirellula baltica SH 1 1795683 NP_864356.1 CDS RB1331 NC_005027.1 677271 679124 R best DB hits: BLAST: embl:CAB96707.1; (AL360354) vir18, transmembrane; E=0.059; transmembrane protein complement(677271..679124) Rhodopirellula baltica SH 1 1796752 NP_864357.1 CDS RB1334 NC_005027.1 679042 679332 D hypothetical protein 679042..679332 Rhodopirellula baltica SH 1 1796199 NP_864358.1 CDS RB1336 NC_005027.1 679357 680019 D hypothetical protein 679357..680019 Rhodopirellula baltica SH 1 1791138 NP_864359.1 CDS RB1337 NC_005027.1 680026 681441 R best DB hits: PFAM: PF00036; EF hand; E=0.16; signal peptide complement(680026..681441) Rhodopirellula baltica SH 1 1794906 NP_864360.1 CDS RB1339 NC_005027.1 681384 681689 R hypothetical protein complement(681384..681689) Rhodopirellula baltica SH 1 1792680 NP_864361.1 CDS RB1341 NC_005027.1 681705 681827 R hypothetical protein complement(681705..681827) Rhodopirellula baltica SH 1 1796475 NP_864362.1 CDS fliP NC_005027.1 681879 682889 D FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 681879..682889 Rhodopirellula baltica SH 1 1796560 NP_864363.1 CDS fliQ NC_005027.1 682896 683162 D PMID: 1597417 best DB hits: BLAST: swissprot:P74891; SSAS_SALTY SECRETION SYSTEM APPARATUS PROTEIN; E=3e-04 pir:H81264; flagellar biosynthetic protein Cj1675 [imported] -; E=6e-04 swissprot:P35535; FLIQ_BACSU FLAGELLAR BIOSYNTHETIC PROTEIN FLIQ; E=7e-04 COG: Cj1675; COG1987 Flagellar biosynthesis/type III secretory pathway; E=6e-05 PFAM: PF01313; Bacterial export proteins, famil; E=4.1e-26; flagellar biosynthetic protein fliQ 682896..683162 Rhodopirellula baltica SH 1 1794988 NP_864364.1 CDS fliR NC_005027.1 683165 683959 D PMID: 9683497 best DB hits: BLAST: gb:AAC32324.1; (AF044580) flagellar protein FliR [Rhodobacter; E=1e-14 pir:B83465; flagellar biosynthetic protein FliR PA1448 [imported] -; E=2e-13 pir:E81323; flagellar biosynthetic protein Cj1179c [imported] -; E=4e-12 COG: PA1448; COG1684 Flagellar biosynthesis/type III secretory pathway; E=2e-14 PFAM: PF01311; Bacterial export proteins, fami; E=7.9e-32; flagellar biosynthetic protein fliR 683165..683959 Rhodopirellula baltica SH 1 1794139 NP_864365.1 CDS flhB NC_005027.1 683952 685034 D PMID: 8299954 best DB hits: BLAST: pir:I40395; flagellar biosynthetic protein FlhB - Bacillus subtilis; E=7e-51 swissprot:P35538; FLHB_BACSU FLAGELLAR BIOSYNTHETIC PROTEIN FLHB; E=7e-51 pir:D72319; flagellar biosynthetic protein flhB TM0909 - Thermotoga; E=6e-46 COG: BS_flhB; COG1377 Flagellar biosynthesis/type III secretory pathway; E=6e-52 TM1672; COG2257 Uncharacterized BCR homologous to the cytoplasmic; E=9e-10 PFAM: PF01312; FlhB HrpN YscU SpaS Family; E=1.4e-91; flagellar biosynthetic protein FlhB 683952..685034 Rhodopirellula baltica SH 1 1796517 NP_864366.1 CDS RB1348 NC_005027.1 685040 685741 D PMID: 10910347 best DB hits: BLAST: pir:A82607; hypothetical protein XF2023 [imported] - Xylella; E=4e-26; hypothetical protein 685040..685741 Rhodopirellula baltica SH 1 1790562 NP_864367.1 CDS RB1350 NC_005027.1 685879 686358 D hypothetical protein 685879..686358 Rhodopirellula baltica SH 1 1792060 NP_864368.1 CDS RB1352 NC_005027.1 686463 687803 D hypothetical protein 686463..687803 Rhodopirellula baltica SH 1 1792246 NP_864369.1 CDS RB1353 NC_005027.1 687873 689234 R PMID: 9428682 best DB hits: BLAST: pir:T44945; hypothetical protein 6 [imported] - Natronobacterium; E=7e-14 swissprot:Q9RTP8; MNTH_DEIRA PROBABLE MANGANESE TRANSPORT PROTEIN; E=7e-08 swissprot:Q9RPF4; MNTH_SALTY MANGANESE TRANSPORT PROTEIN MNTH; E=9e-05 COG: DR1709; COG1914 Mn2+ and Fe2+ transporters of the NRAMP family; E=7e-09 PFAM: PF00122; E1-E2 ATPase; E=0.38 PF01566; Natural resistance-associated ma; E=0.00088; cytochrome ba3- manganese transport protein mntH complement(687873..689234) Rhodopirellula baltica SH 1 1790149 NP_864370.2 CDS nagB NC_005027.1 689283 690014 D catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate; glucosamine-6-phosphate deaminase 689283..690014 Rhodopirellula baltica SH 1 1792493 NP_864371.1 CDS nagA NC_005027.1 690011 690922 D PMID: 9634230 best DB hits: BLAST: pir:C70845; probable nagA protein - Mycobacterium tuberculosis; E=8e-23 embl:CAB93044.1; (AL357432) deacetylase [Streptomyces; E=2e-19 swissprot:O34450; NAGA_BACSU N-ACETYLGLUCOSAMINE-6-PHOSPHATE; E=5e-18 COG: Rv3332; COG1820 N-acetylglucosamine-6-phosphate deacetylase; E=7e-24 PFAM: PF02612; N-acetylglucosamine-6-phosphate deac; E=5.6e-05; N-acetylglucosamine-6-phosphate deacetylase 690011..690922 Rhodopirellula baltica SH 1 1794488 NP_864372.1 CDS RB1357 NC_005027.1 690962 691930 R PMID: 10984043 best DB hits: BLAST: pir:H70302; conserved hypothetical protein aq_035 - Aquifex aeolicus; E=2e-26 pir:A71678; probable response regulatory protein RP237 - Rickettsia; E=5e-21 pir:G82209; GGDEF family protein VC1353 [imported] - Vibrio cholerae; E=8e-21 COG: aq_035_2; COG2199 Diguanylate cyclase/phosphodiesterase domain 1; E=2e-27 PFAM: PF00990; GGDEF domain; E=2.6e-46; hypothetical protein complement(690962..691930) Rhodopirellula baltica SH 1 1791908 NP_864373.1 CDS glgC NC_005027.1 691982 693322 R PMID: 11208782 best DB hits: BLAST: gb:AAB93540.1; (AF016923) ADP-glucose pyrophosphorylase [Thermus; E=1e-103 pir:C82428; glucose-1-phosphate adenylyltransferase VCA0699; E=1e-102 embl:CAC17471.1; (AJ291603) ADP glucose pyrophosphorylase; E=9e-99 COG: VCA0699; COG0448 ADP-glucose pyrophosphorylase; E=1e-103 MTH1759; COG1208 Nucleoside-diphosphate-sugar pyrophosphorylases; E=9e-20 BH1086; COG0448 ADP-glucose pyrophosphorylase; E=3e-14 PFAM: PF00483; Nucleotidyl transferase; E=5.7e-74; ADP-glucose pyrophosphorylase complement(691982..693322) Rhodopirellula baltica SH 1 1794481 NP_864374.1 CDS RB1359 NC_005027.1 693488 695377 D PMID: 10684935 best DB hits: BLAST: swissprot:P18584; DEGP_CHLTR PROBABLE SERINE PROTEASE DO-LIKE; E=1e-63 pir:B81728; serine proteinase, HtrADegQ/DegS family TC0210; E=3e-63 embl:CAA72164.1; (Y11304) ORF E0 [Rhodobacter capsulatus]; E=5e-62 COG: CT823; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=1e-64 CPn0979; COG0265 Trypsin-like serine proteases, typically; E=5e-63 htrA; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=3e-57 PFAM: PF02874; ATP synthase alpha/beta family,; E=0.027 PF00089; Trypsin; E=9.8e-30 PF00595; PDZ domain (Also known as DHR o; E=1e-10; serine protease do-like DEGP 693488..695377 Rhodopirellula baltica SH 1 1793637 NP_864375.1 CDS RB1361 NC_005027.1 695412 696413 D hypothetical protein 695412..696413 Rhodopirellula baltica SH 1 1791466 NP_864376.1 CDS RB1362 NC_005027.1 696352 696600 D hypothetical protein 696352..696600 Rhodopirellula baltica SH 1 1790285 NP_864377.1 CDS ald NC_005027.1 696588 697673 R PMID: 10473410 best DB hits: BLAST: gb:AAC23578.1; (AF070715) alanine dehydrogenase [Shewanella sp.; E=2e-97 pir:JE0388; alanine dehydrogenase (EC 1.4.1.1) - Enterobacter; E=1e-96 swissprot:P30234; DHA_MYCTU ALANINE DEHYDROGENASE (40 KDA ANTIGEN); E=5e-96 COG: Rv2780; COG0686 Alanine dehydrogenase; E=5e-97 pntA; COG3288 NAD/NADP transhydrogenase alpha subunit; E=4e-21 PFAM: PF01262; Alanine dehydrogenase/pyridine nucl; E=1.6e-147; alanine dehydrogenase complement(696588..697673) Rhodopirellula baltica SH 1 1791802 NP_864378.1 CDS RB1364 NC_005027.1 697677 699089 R best DB hits: PFAM: PF00884; Sulfatase; E=0.0012; sulfatase complement(697677..699089) Rhodopirellula baltica SH 1 1794226 NP_864379.1 CDS RB1367 NC_005027.1 699089 700030 D PMID: 8905231 best DB hits: BLAST: pir:S74482; UDP-N-acetyl-D-mannosaminuronic acid transferase rffM-1; E=3e-32 embl:CAB92959.1; (AJ401026) hypothetical protein; E=2e-28 prf:2211258F; cpsF gene [Streptococcus pneumoniae]; E=1e-24 COG: slr1118; COG1922 Teichoic acid biosynthesis proteins; E=3e-33; UDP-N-acetyl-D-mannosaminuronic acid transferase 699089..700030 Rhodopirellula baltica SH 1 1793732 NP_864380.1 CDS sppA NC_005027.1 700085 701491 R PMID: 9384377 best DB hits: BLAST: pir:E69990; proteinase IV homolog yteI - Bacillus subtilis -----; E=1e-21 pir:F69207; proteinase IV - Methanobacterium thermoautotrophicum; E=1e-18 ddbj:BAB06917.1; (AP001518) proteinase IV [Bacillus halodurans]; E=3e-17 COG: BS_yteI; COG0616 Periplasmic serine proteases (ClpP class); E=1e-22 PFAM: PF01343; Peptidase U7; E=3e-18; proteinase IV homolog yteI complement(700085..701491) Rhodopirellula baltica SH 1 1792409 NP_864381.1 CDS RB1372 NC_005027.1 701430 703052 D hypothetical protein 701430..703052 Rhodopirellula baltica SH 1 1791492 NP_864382.1 CDS RB1376 NC_005027.1 702919 705720 R best DB hits: BLAST: gb:AAF82144.1; AC034256_8 (AC034256) Contains similarity to F-box; E=0.004 ddbj:BAB21785.1; (AB051481) KIAA1694 protein [Homo sapiens]; E=0.061 embl:CAB95328.1; (AL359782) possible adenylate cyclase; E=0.096; adenylate cyclase complement(702919..705720) Rhodopirellula baltica SH 1 1792208 NP_864383.1 CDS dys1 NC_005027.1 705784 706896 D PMID: 11759840 PMID: 11016950 best DB hits: BLAST: gb:AAG19745.1; (AE005060) deoxyhypusine synthase; Dhs; E=4e-07 gb:AAB88953.1; (AE000945) deoxyhypusine synthase (dys1-2); E=1e-05 embl:CAB65461.1; (AJ238622) deoxyhypusine synthase [Senecio; E=3e-05 COG: VNG1432G; COG1899 Deoxyhypusine synthase; E=4e-08 PFAM: PF01916; Deoxyhypusine synthase; E=0.57; deoxyhypusine synthase (Dhs) 705784..706896 Rhodopirellula baltica SH 1 1796661 NP_864384.1 CDS RB1384 NC_005027.1 706928 707461 R hypothetical protein complement(706928..707461) Rhodopirellula baltica SH 1 1791471 NP_864385.1 CDS RB1386 NC_005027.1 707484 708536 R PMID: 10984043 best DB hits: BLAST: pir:G83627; probable nucleoside hydrolase PA0143 [imported] -; E=0.062 COG: PA0143; COG1957 Inosine-uridine nucleoside N-ribohydrolase; E=0.006 PFAM: PF01156; Inosine-uridine preferring nucle; E=0.52; nucleoside hydrolase complement(707484..708536) Rhodopirellula baltica SH 1 1796347 NP_864386.1 CDS RB1389 NC_005027.1 708434 708892 R hypothetical protein complement(708434..708892) Rhodopirellula baltica SH 1 1791276 NP_864387.1 CDS RB1390 NC_005027.1 708718 709167 R signal peptide complement(708718..709167) Rhodopirellula baltica SH 1 1795558 NP_864388.1 CDS RB1391 NC_005027.1 709164 710780 R PMID: 11206551 best DB hits: BLAST: swissprot:Q10403; YM16_MYCTU HYPOTHETICAL 31.7 KDA PROTEIN RV2216; E=9e-44 swissprot:P77775; YFCH_ECOLI HYPOTHETICAL 32.7 KDA PROTEIN IN; E=2e-42 gb:AAG57433.1; AE005462_8 (AE005462) sugar nucleotide; E=4e-42 COG: Rv2216; COG1090 Predicted nucleoside-diphosphate sugar epimerases; E=8e-45; nucleoside-diphosphate sugar epimerase complement(709164..710780) Rhodopirellula baltica SH 1 1791285 NP_864389.1 CDS rpoD NC_005027.1 710683 711705 R PMID: 10548737 best DB hits: BLAST: ddbj:BAA84590.1; (AB003084) RNA polymerase sigma 70 [Helicobacter; E=1e-14 swissprot:Q9ZMY3; RPSD_HELPJ RNA POLYMERASE SIGMA FACTOR RPOD; E=2e-14 gb:AAB81010.1; (U83703) RNA polymerase principal sigma factor; E=2e-14 COG: jhp0081; COG0568 DNA-directed RNA polymerase sigma subunits; E=1e-15 PFAM: PF00140; Sigma-70 factor; E=8.8e-19; RNA polymerase sigma 70 complement(710683..711705) Rhodopirellula baltica SH 1 1792101 NP_864390.1 CDS RB1394 NC_005027.1 711758 711994 R hypothetical protein complement(711758..711994) Rhodopirellula baltica SH 1 1792957 NP_864391.1 CDS RB1395 NC_005027.1 712097 713056 D PMID: 8843436 best DB hits: BLAST: embl:CAB56371.1; (AL118514) DNA-binding protein; E=0.089 embl:CAC22757.1; (AL512944) hypothetical protein SC8D11.40; E=0.48 gb:AAD14631.1; (AF102623) trimethylamine corrinoid protein MttC; E=0.64 PFAM: PF02310; B12 binding domain; E=0.11; DNA-binding protein 712097..713056 Rhodopirellula baltica SH 1 1790687 NP_864392.1 CDS RB1398 NC_005027.1 713151 714437 R PMID: 10360571 best DB hits: BLAST: pir:H72222; conserved hypothetical protein - Thermotoga maritima; E=2e-04 COG: TM1686; COG1376 Uncharacterized ACR; E=2e-05 PFAM: PF01476; LysM domain; E=3.9e-07; hypothetical protein complement(713151..714437) Rhodopirellula baltica SH 1 1792282 NP_864393.1 CDS RB1400 NC_005027.1 714542 715402 D hypothetical protein 714542..715402 Rhodopirellula baltica SH 1 1790814 NP_864394.1 CDS RB1403 NC_005027.1 715604 715867 R hypothetical protein complement(715604..715867) Rhodopirellula baltica SH 1 1793065 NP_864395.1 CDS outD NC_005027.1 715830 717395 D PMID: 10360571 best DB hits: BLAST: pir:B72292; hypothetical protein TM1117 - Thermotoga maritima; E=4e-24 pir:C83561; probable type II secretion system protein PA0685; E=8e-22 pir:S32858; outD protein - Erwinia carotovora ----- embl:; E=1e-18 COG: TM1117; COG1450 General secretory pathway protein D; E=4e-25 PFAM: PF00263; Bacterial type II and III secr; E=1.7e-25; protein transporter 715830..717395 Rhodopirellula baltica SH 1 1795035 NP_864396.1 CDS RB1408 NC_005027.1 717470 719293 D signal peptide 717470..719293 Rhodopirellula baltica SH 1 1791912 NP_864397.1 CDS RB1411 NC_005027.1 719337 720365 R PMID: 10761919 best DB hits: BLAST: pir:H81878; probable dihydrodipicolinate synthase (EC 4.2.1.52); E=2e-08 pir:D81141; dihydrodipicolinate synthase NMB0929 [imported] -; E=3e-08 pir:D83488; probable dihydrodipicolinate synthetase PA1254; E=7e-07 COG: NMB0929; COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate; E=3e-09 PFAM: PF00701; Dihydrodipicolinate synthetase f; E=9.1e-05; dihydrodipicolinate synthase complement(719337..720365) Rhodopirellula baltica SH 1 1795031 NP_864398.1 CDS RB1412 NC_005027.1 720399 721325 D PMID: 8626508 best DB hits: BLAST: swissprot:P56160; YHEB_CHLVI HYPOTHETICAL 28.2 KD PROTEIN IN HEMB; E=5e-37 pir:B70646; probable monophosphatase - Mycobacterium tuberculosis; E=4e-34 embl:CAB94593.1; (AL359214) monophosphatase; E=2e-33 COG: Rv3137; COG0483 Archaeal fructose-1,6-bisphosphatase and related; E=4e-35 VC2722; COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS); E=2e-13 VC0745; COG0483 Archaeal fructose-1,6-bisphosphatase and related; E=3e-12 PFAM: PF00459; Inositol monophosphatase; E=6.9e-53; inositol monophosphatase 720399..721325 Rhodopirellula baltica SH 1 1793028 NP_864399.1 CDS RB1413 NC_005027.1 721425 721550 D hypothetical protein 721425..721550 Rhodopirellula baltica SH 1 1791977 NP_864400.1 CDS RB1414 NC_005027.1 721538 722800 R best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide complement(721538..722800) Rhodopirellula baltica SH 1 1791157 NP_864401.1 CDS RB1417 NC_005027.1 722874 723194 D hypothetical protein 722874..723194 Rhodopirellula baltica SH 1 1791737 NP_864402.1 CDS RB1420 NC_005027.1 723375 724427 D signal peptide 723375..724427 Rhodopirellula baltica SH 1 1793799 NP_864403.1 CDS RB1422 NC_005027.1 724470 726560 R best DB hits: PFAM: PF01595; Domain of unknown function DUF21; E=0.59; signal peptide complement(724470..726560) Rhodopirellula baltica SH 1 1795910 NP_864404.1 CDS RB1427 NC_005027.1 726737 728476 R subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit D complement(726737..728476) Rhodopirellula baltica SH 1 1790427 NP_864405.1 CDS RB1428 NC_005027.1 728473 728799 R hypothetical protein complement(728473..728799) Rhodopirellula baltica SH 1 1792099 NP_864406.1 CDS RB1430 NC_005027.1 728796 730406 R PMID: 1470679 best DB hits: BLAST: embl:CAC14148.1; (AJ245399) NADH-ubiquinone; E=4e-80 gb:AAG19079.1; (AE005006) Vng0562c [Halobacterium sp. NRC-1]; E=4e-57 pir:F71683; NADH dehydrogenase (ubiquinone) (EC 1.6.5.3) I chain L2; E=7e-31 COG: VNG0562C; COG0651 Formate hydrogenlyase subunit 3; E=3e-58 RP283; COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L); E=7e-32 BH1316; COG0651 Formate hydrogenlyase subunit 3; E=2e-22 PFAM: PF00662; NADH-Ubiquinone oxidoreductase; E=0.69 PF00361; NADH-Ubiquinone/plastoquinone (; E=2.6e-49; NADH-ubiquinone oxidoreductase subunit complement(728796..730406) Rhodopirellula baltica SH 1 1792030 NP_864407.1 CDS RB1431 NC_005027.1 730340 731818 R subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; monovalent cation/H+ antiporter subunit D complement(730340..731818) Rhodopirellula baltica SH 1 1794696 NP_864408.1 CDS RB1432 NC_005027.1 731815 732414 R PMID: 11016950 best DB hits: BLAST: gb:AAG19081.1; (AE005007) Vng0565c [Halobacterium sp. NRC-1]; E=5e-11 pir:H71683; hypothetical protein RP285 - Rickettsia prowazekii; E=9e-09 pir:E75113; long hypothetical protein PAB0488 - Pyrococcus abyssi; E=5e-07 COG: VNG0565C; COG1006 Multisubunit Na+/H+ antiporter; E=4e-12 PFAM: PF01898; Protein of unknown function DUF67; E=1.9e-11; multisubunit Na+/H+ antiporter complement(731815..732414) Rhodopirellula baltica SH 1 1790666 NP_864409.1 CDS RB1433 NC_005027.1 732411 732848 R subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit B complement(732411..732848) Rhodopirellula baltica SH 1 1793120 NP_864410.1 CDS RB1434 NC_005027.1 732845 733423 R subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit B complement(732845..733423) Rhodopirellula baltica SH 1 1790567 NP_864411.1 CDS RB1436 NC_005027.1 733420 733782 R PMID: 9679194 PMID: 11016950 best DB hits: BLAST: swissprot:O58672; Y944_PYRHO HYPOTHETICAL PROTEIN PH0944 -----; E=0.052 pir:C75465; conserved hypothetical protein - Deinococcus radiodurans; E=0.13 pir:F75101; hypothetical protein PAB0803 - Pyrococcus abyssi; E=0.67 COG: PH0944; COG1320 Multisubunit Na+/H+ antiporter; E=0.005; hypothetical protein complement(733420..733782) Rhodopirellula baltica SH 1 1792433 NP_864412.1 CDS RB1439 NC_005027.1 733796 734224 R PMID: 10952301 best DB hits: BLAST: pir:F82494; conserved hypothetical protein VCA0153 [imported] -; E=5e-05 gb:AAF21817.1; AF097740_6 (AF097740) multiple resistance and pH; E=7e-04 ddbj:BAB05033.1; (AP001511) Na+H+ antiporter [Bacillus; E=0.004 COG: VCA0153; COG2212 Multisubunit Na+/H+ antiporter, MnhF subunit; E=4e-06; hypothetical protein complement(733796..734224) Rhodopirellula baltica SH 1 1794389 NP_864413.1 CDS RB1442 NC_005027.1 734221 734754 R PMID: 10360571 best DB hits: BLAST: pir:C72280; conserved hypothetical protein - Thermotoga maritima; E=8e-09 pir:A71726; hypothetical protein RP156 - Rickettsia prowazekii; E=3e-08 pir:A75113; hypothetical protein PAB0485 - Pyrococcus abyssi (strain; E=8e-08 COG: TM1205; COG1863 Multisubunit Na+/H+ antiporter; E=8e-10 PFAM: PF01899; Protein of unknown function DUF68; E=1.9e-09; Na+/H+ antiporter complement(734221..734754) Rhodopirellula baltica SH 1 1795315 NP_864414.1 CDS RB1443 NC_005027.1 734719 734886 D hypothetical protein 734719..734886 Rhodopirellula baltica SH 1 1794627 NP_864415.1 CDS RB1444 NC_005027.1 734968 735801 R PMID: 10567266 best DB hits: BLAST: pir:C75341; tetratricopeptide repeat family protein - Deinococcus; E=9e-05 ddbj:BAA11643.2; (D82942) tetratricopeptide-repeat protein; E=1e-04 pir:E69078; conserved hypothetical protein MTH1585 -; E=0.006 COG: DR1891; COG0457 TPR-repeat-containing proteins; E=9e-06; TPR repeat-containing protein complement(734968..735801) Rhodopirellula baltica SH 1 1794073 NP_864416.1 CDS RB1446 NC_005027.1 735731 736513 R hypothetical protein complement(735731..736513) Rhodopirellula baltica SH 1 1794997 NP_864417.1 CDS RB1449 NC_005027.1 736500 736697 D hypothetical protein 736500..736697 Rhodopirellula baltica SH 1 1794309 NP_864418.1 CDS RB1451 NC_005027.1 736766 738160 R PMID: 9371463 PMID: 11677609 best DB hits: BLAST: gb:AAG31169.1; (AF314961) unknown [Salmonella typhimurium]; E=0.043 gb:AAB89850.1; (AE001008) conserved hypothetical protein; E=0.049 pir:A82284; conserved hypothetical protein VC0762 [imported] -; E=0.13 COG: AF1399; COG1520 Uncharacterized proteins of WD40-like repeat family; E=0.005 PFAM: PF01011; PQQ enzyme repeat; E=5.4e-05; serine/threonine protein kinase related protein complement(736766..738160) Rhodopirellula baltica SH 1 1792990 NP_864419.1 CDS RB1453 NC_005027.1 738182 738298 D hypothetical protein 738182..738298 Rhodopirellula baltica SH 1 1794137 NP_864420.1 CDS araC NC_005027.1 738371 739687 D PMID: 7542800 best DB hits: BLAST: swissprot:P45043; XYLR_HAEIN XYLOSE OPERON REGULATORY PROTEIN; E=8e-37 swissprot:P37390; XYLR_ECOLI XYLOSE OPERON REGULATORY PROTEIN; E=1e-34 ddbj:BAB03212.1; (AB046360) xylose operon regulatory; E=6e-32 COG: HI1106_1; COG1609 Transcriptional regulators; E=3e-17 xylR_2; COG2207 AraC-type DNA-binding domain-containing proteins; E=2e-16 xylR_1; COG1609 Transcriptional regulators; E=1e-13 PFAM: PF00165; Bacterial regulatory helix-turn-heli; E=3.1e-17; xylose operon regulatory protein 738371..739687 Rhodopirellula baltica SH 1 1793951 NP_864421.1 CDS RB1456 NC_005027.1 739805 741292 D PMID: 10699374 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=6e-33 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=3e-32 swissprot:P50428; ARSA_MOUSE ARYLSULFATASE A PRECURSOR (ASA); E=5e-29 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=7e-26 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=3e-05 Rv3077; COG3119 Arylsulfatase A and related enzymes; E=0.001 PFAM: PF00884; Sulfatase; E=3.8e-40; N-acetylgalactosamine-6-sulfatase 739805..741292 Rhodopirellula baltica SH 1 1796747 NP_864422.1 CDS RB1457 NC_005027.1 741299 741433 D hypothetical protein 741299..741433 Rhodopirellula baltica SH 1 1793687 NP_864423.1 CDS RB1458 NC_005027.1 741400 742872 R hypothetical protein complement(741400..742872) Rhodopirellula baltica SH 1 1796492 NP_864424.1 CDS RB1461 NC_005027.1 742963 743517 R PMID: 8969502 best DB hits: BLAST: ddbj:BAA06427.1; (D30762) unknown [Bacillus subtilis]; E=0.084 swissprot:P42401; YCKC_BACSU HYPOTHETICAL 17.0 KD PROTEIN IN COMJ; E=0.084 COG: BS_yckC; COG1714 Uncharacterized membrane protein/domain; E=0.008; signal peptide complement(742963..743517) Rhodopirellula baltica SH 1 1793804 NP_864425.1 CDS RB1462 NC_005027.1 743521 743799 R hypothetical protein complement(743521..743799) Rhodopirellula baltica SH 1 1791425 NP_864426.1 CDS RB1463 NC_005027.1 743584 743886 D hypothetical protein 743584..743886 Rhodopirellula baltica SH 1 1790039 NP_864427.1 CDS RB1464 NC_005027.1 743871 745739 D PMID: 8020961 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=9e-28 swissprot:P50473; ARS_STRPU ARYLSULFATASE PRECURSOR (ARYL-SULFATE; E=4e-26 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=6e-26 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=2e-17 PFAM: PF00884; Sulfatase; E=2.3e-39; N-acetylgalactosamine 6-sulfate sulfatase GALNS 743871..745739 Rhodopirellula baltica SH 1 1794893 NP_864428.1 CDS RB1467 NC_005027.1 745811 749368 D best DB hits: BLAST: gb:AAF87662.1; AF223645_1 (AF223645) lipase [uncultured bacterium]; E=0.54 PFAM: PF01738; Dienelactone hydrolase; E=0.00062; signal peptide 745811..749368 Rhodopirellula baltica SH 1 1791878 NP_864429.1 CDS RB1470 NC_005027.1 749365 751722 D best DB hits: PFAM: PF02018; Cellulose binding domain; E=0.61; hypothetical protein 749365..751722 Rhodopirellula baltica SH 1 1790715 NP_864430.1 CDS RB1472 NC_005027.1 751719 753245 D signal peptide 751719..753245 Rhodopirellula baltica SH 1 1796949 NP_864431.1 CDS RB1474 NC_005027.1 753312 753482 R hypothetical protein complement(753312..753482) Rhodopirellula baltica SH 1 1793817 NP_864432.1 CDS arsB NC_005027.1 753465 755204 D PMID: 1427856 best DB hits: BLAST: swissprot:P33727; ARSB_FELCA ARYLSULFATASE B PRECURSOR (ASB); E=2e-47 pdb:1FSU; 4-Sulfatase (Human); E=3e-47 gb:AAA51779.1; (M32373) arylsulfatase B precursor [Homo sapiens]; E=4e-47 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=2e-31 PFAM: PF00884; Sulfatase; E=3.6e-76; arylsulfatase 753465..755204 Rhodopirellula baltica SH 1 1791117 NP_864433.1 CDS RB1476 NC_005027.1 755223 755366 D hypothetical protein 755223..755366 Rhodopirellula baltica SH 1 1796137 NP_864434.1 CDS atsA NC_005027.1 755327 756943 D PMID: 7744061 best DB hits: BLAST: swissprot:P51691; ARS_PSEAE ARYLSULFATASE (ARYL-SULFATE; E=1e-39 pir:S69336; arylsulfatase (EC 3.1.6.1) - Pseudomonas aeruginosa; E=3e-39 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=2e-35 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=9e-41 PFAM: PF00884; Sulfatase; E=1.3e-43; arylsulfatase 755327..756943 Rhodopirellula baltica SH 1 1797072 NP_864435.1 CDS RB1478 NC_005027.1 756943 758943 D hypothetical protein 756943..758943 Rhodopirellula baltica SH 1 1792020 NP_864436.1 CDS ilvD NC_005027.1 758954 760687 R catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase complement(758954..760687) Rhodopirellula baltica SH 1 1795552 NP_864437.1 CDS RB1481 NC_005027.1 760742 761509 D PMID: 10984043 best DB hits: BLAST: pir:E83580; conserved hypothetical protein PA0529 [imported] -; E=1e-34 pir:A69811; conserved hypothetical protein yflK - Bacillus subtilis; E=4e-32 pir:F83366; conserved hypothetical protein PA2229 [imported] -; E=2e-31 COG: PA0529; COG2258 Uncharacterized BCR; E=1e-35; hypothetical protein 760742..761509 Rhodopirellula baltica SH 1 1793544 NP_864438.1 CDS RB1483 NC_005027.1 761490 762293 D PMID: 10567266 best DB hits: BLAST: gb:AAF12583.1; AE001826_52 (AE001826) sensor histidine; E=4e-09 pir:D75429; sensory box sensor histidine kinase - Deinococcus; E=5e-09 pir:A69158; sensory transduction histidine kinase - Methanobacterium; E=6e-08 COG: DRB0029_2; COG0642 Sensory transduction histidine kinases; E=4e-10 PFAM: PF02518; Histidine kinase-, DNA gyrase B-, p; E=6.3e-13; sensor histidine kinase/response regulator 761490..762293 Rhodopirellula baltica SH 1 1794885 NP_864439.1 CDS polB NC_005027.1 762303 764072 D PMID: 9537320 best DB hits: BLAST: pir:F70423; DNA polymerase beta family - Aquifex aeolicus -----; E=1e-110 ddbj:BAB06826.1; (AP001517) DNA-dependent DNA polymerase beta; E=1e-105 pir:C69985; probable DNA-dependent DNA polymerase beta chain yshC -; E=1e-102 COG: aq_1422_1; COG1796 DNA polymerase IV (family X); E=4e-62 BH3107_2; COG1387 Histidinol phosphatase and related hydrolases of; E=4e-53 Ta0758_1; COG1796 DNA polymerase IV (family X); E=3e-51 PFAM: PF00966; DNA polymerase X family; E=6.5e-35 PF02231; PHP domain N-terminal region; E=1.3e-22 PF02811; PHP domain C-terminal region; E=1.6e-16; DNA polymerase beta family protein 762303..764072 Rhodopirellula baltica SH 1 1791363 NP_864440.1 CDS RB1487 NC_005027.1 764104 764424 D PMID: 10761919 best DB hits: BLAST: pir:D81801; conserved hypothetical protein NMA1764 [imported] -; E=2e-09 pir:G81066; conserved hypothetical protein NMB1575 [imported] -; E=2e-09 pir:F83200; conserved hypothetical protein PA3566 [imported] -; E=3e-07 COG: NMB1575; COG1359 Uncharacterized ACR; E=2e-10 PFAM: PF02619; Uncharacterized ACR, YneC family COG; E=1.7e-17; hypothetical protein 764104..764424 Rhodopirellula baltica SH 1 1790736 NP_864441.1 CDS trxB NC_005027.1 764421 766184 D PMID: 8843436 best DB hits: BLAST: embl:CAB93736.1; (AL357613) thioredoxin reductase.; E=2e-67 pir:H72322; thioredoxin reductase - Thermotoga maritima (strain; E=2e-27 ddbj:BAB07290.1; (AP001519) thioredoxin reductase (NADPH); E=1e-26 COG: TM0869; COG0492 Thioredoxin reductase/alkyl hydroperoxide reductase; E=2e-28 VNG1259G; COG0492 Thioredoxin reductase/alkyl hydroperoxide; E=1e-21 aq_500; COG0492 Thioredoxin reductase/alkyl hydroperoxide reductase; E=1e-20 PFAM: PF00027; Cyclic nucleotide-binding domai; E=1.6e-07 PF00732; GMC oxidoreductases; E=0.87 PF01946; Thi4 family; E=0.0023; thioredoxin reductase 764421..766184 Rhodopirellula baltica SH 1 1789917 NP_864442.1 CDS RB1491 NC_005027.1 766265 766600 R hypothetical protein complement(766265..766600) Rhodopirellula baltica SH 1 1791603 NP_864443.1 CDS RB1492 NC_005027.1 766339 766536 D hypothetical protein 766339..766536 Rhodopirellula baltica SH 1 1795102 NP_864444.1 CDS RB1493 NC_005027.1 766403 766627 D hypothetical protein 766403..766627 Rhodopirellula baltica SH 1 1792128 NP_864445.1 CDS RB1495 NC_005027.1 766865 768280 R best DB hits: BLAST: pir:T34965; probable membrane protein - Streptomyces coelicolor; E=2e-09 gb:AAB06263.1; (L39876) ORF1; PepX [Caldicellulosiruptor; E=4e-04 pir:E75460; conserved hypothetical protein - Deinococcus radiodurans; E=0.002 COG: DR0919; COG1721 Uncharacterized ACR; E=2e-04 PFAM: PF01882; Protein of unknown function DUF58; E=7.1e-20; hypothetical protein complement(766865..768280) Rhodopirellula baltica SH 1 1795081 NP_864446.1 CDS moxR NC_005027.1 768277 769395 R PMID: 10484179 best DB hits: BLAST: ddbj:BAB04323.1; (AP001509) methanol dehydrogenase regulatory; E=4e-87 pir:T34964; probable regulatory protein - Streptomyces coelicolor; E=6e-81 pir:H72289; hypothetical protein TM1132 - Thermotoga maritima; E=1e-80 COG: BH0604; COG0714 MoxR-like ATPases; E=4e-88 PFAM: PF00004; ATPase associated with va; E=4.6e-05 PF01078; Magnesium chelatase, subunit Chl; E=8e-14; methanol dehydrogenase regulatory protein complement(768277..769395) Rhodopirellula baltica SH 1 1791476 NP_864447.1 CDS RB1501 NC_005027.1 769419 769571 D hypothetical protein 769419..769571 Rhodopirellula baltica SH 1 1791022 NP_864448.1 CDS RB1502 NC_005027.1 769609 770010 D PMID: 10524254 PMID: 12004073 best DB hits: BLAST: gb:AAF61932.1; (AF230804) sigma-54 activator protein Act1; E=1e-07 swissprot:Q00934; PILR_PSEAE TYPE 4 FIMBRIAE EXPRESSION REGULATORY; E=1e-06 pir:B70195; response regulatory protein (rrp-2) homolog - Lyme; E=1e-06 COG: PA4547; COG2204 AAA superfamily ATPases with N-terminal receiver; E=1e-07 BH1808; COG0745 Response regulators consisting of a CheY-like; E=6e-07 DRB0029_1; COG0784 CheY-like receiver domains; E=3e-06 PFAM: PF00072; Response regulator receiver doma; E=4.3e-14; response regulator 769609..770010 Rhodopirellula baltica SH 1 1790853 NP_864449.1 CDS RB1503 NC_005027.1 769965 771212 D hypothetical protein 769965..771212 Rhodopirellula baltica SH 1 1791010 NP_864450.1 CDS miaA NC_005027.1 771198 772202 R PMID: 10910347 best DB hits: BLAST: swissprot:Q9PH56; MIAA_XYLFA TRNA; E=1e-44 swissprot:Q9KV12; MIAA_VIBCH TRNA; E=2e-44 swissprot:O30762; MIAA_PSEPU TRNA; E=4e-44 COG: XF0090; COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; E=1e-45 PFAM: PF01715; IPP transferase; E=3e-70; tRNA delta(2)-isopentenylpyrophosphate transferase complement(771198..772202) Rhodopirellula baltica SH 1 1796628 NP_864451.1 CDS RB1508 NC_005027.1 772233 772841 D PMID: 3106324 best DB hits: BLAST: pir:D75017; n-terminal acetyltransferase PAB1098 - Pyrococcus abyssi; E=4e-05 pir:A71455; probable acetyltransferase - Pyrococcus horikoshii; E=2e-04 embl:CAA51674.1; (X73149) Nourseothricin acetyltransferase; E=3e-04 COG: PAB1098; COG0456 Acetyltransferases; E=4e-06 BS_yobR; COG0454 Histone acetyltransferase HPA2 and related; E=1e-04 PA4678; COG0456 Acetyltransferases; E=5e-04 PFAM: PF00583; Acetyltransferase (GNAT) family; E=3.8e-21; n-terminal acetyltransferase 772233..772841 Rhodopirellula baltica SH 1 1796196 NP_864452.1 CDS RB1509 NC_005027.1 772909 773379 R hypothetical protein complement(772909..773379) Rhodopirellula baltica SH 1 1796900 NP_864453.1 CDS RB1511 NC_005027.1 773376 774995 R hypothetical protein complement(773376..774995) Rhodopirellula baltica SH 1 1794296 NP_864454.1 CDS RB1513 NC_005027.1 774907 775203 R hypothetical protein complement(774907..775203) Rhodopirellula baltica SH 1 1790744 NP_864455.1 CDS RB1514 NC_005027.1 775037 775309 D hypothetical protein 775037..775309 Rhodopirellula baltica SH 1 1796837 NP_864456.1 CDS RB1516 NC_005027.1 775306 776193 R PMID: 9403685 best DB hits: BLAST: pir:G70121; conserved hypothetical protein BB0175 - Lyme disease; E=5e-14 swissprot:P71761; YE80_MYCTU HYPOTHETICAL 34.3 KDA PROTEIN RV1480; E=1e-11 pir:G82493; conserved hypothetical protein VCA0174 [imported] -; E=3e-09 COG: BB0175; COG1721 Uncharacterized ACR; E=4e-15 PFAM: PF01882; Protein of unknown function DUF; E=8.2e-16; hypothetical protein complement(775306..776193) Rhodopirellula baltica SH 1 1790163 NP_864457.1 CDS lolD NC_005027.1 776190 776879 R PMID: 7542800 best DB hits: BLAST: pir:D83271; probable ATP-binding component of ABC transporter PA2987; E=2e-50 swissprot:P45247; LOLD_HAEIN LIPOPROTEIN RELEASING SYSTEM; E=2e-49 pir:D83071; probable ATP-binding component of ABC transporter PA4594; E=2e-48 COG: PA2987; COG1136 ABC-type (unclassified) transport system, ATPase; E=2e-51 PFAM: PF00006; ATP synthase alpha/beta family, n; E=0.11 PF01202; Shikimate kinase; E=0.46 PF00005; ABC transporter; E=1.7e-54; lipoprotein releasing system ATP-binding protein lolD complement(776190..776879) Rhodopirellula baltica SH 1 1794900 NP_864458.1 CDS RB1518 NC_005027.1 776896 777078 R hypothetical protein complement(776896..777078) Rhodopirellula baltica SH 1 1796351 NP_864459.1 CDS RB1519 NC_005027.1 777075 777299 R hypothetical protein complement(777075..777299) Rhodopirellula baltica SH 1 1790218 NP_864460.1 CDS RB1520 NC_005027.1 777178 777492 D hypothetical protein 777178..777492 Rhodopirellula baltica SH 1 1789998 NP_864461.1 CDS gspG NC_005027.1 777494 778657 D PMID: 8326859 best DB hits: BLAST: gb:AAF36472.1; AF127982_2 (AF127982) GspG [Burkholderia cepacia]; E=1e-04 ddbj:BAB18792.1; (AB050004) GspG [Burkholderia cepacia]; E=1e-04 gb:AAC83358.1; (AF092918) outer membrane secretion protein T; E=3e-04 COG: PA3101; COG2165 General secretory pathway proteins G and H and; E=2e-04 PFAM: PF00114; Pilin (bacterial filament); E=0.16; general secretion pathway protein G 777494..778657 Rhodopirellula baltica SH 1 1795854 NP_864462.1 CDS RB1523 NC_005027.1 778654 779130 D hypothetical protein 778654..779130 Rhodopirellula baltica SH 1 1790935 NP_864463.1 CDS RB1526 NC_005027.1 779301 780287 D PMID: 11759840 best DB hits: BLAST: pir:S75044; hypothetical protein sll1606 - Synechocystis sp. (strain; E=0.004 pir:E70470; conserved hypothetical protein aq_1986 - Aquifex; E=0.005 COG: sll1606; COG1434 Uncharacterized ACR; E=3e-04 PFAM: PF02698; Uncharacterized ACR, COG1434; E=0.0017; hypothetical protein 779301..780287 Rhodopirellula baltica SH 1 1791993 NP_864464.1 CDS pa1G NC_005027.1 780317 781096 R PMID: 8083218 best DB hits: BLAST: gb:AAH00398.1; AAH00398 (BC000398) platelet-activating factor; E=3e-10 ref:XP_006434.1; platelet-activating factor acetylhydrolase,; E=3e-10 gb:AAC52997.1; (U57747) platelet-activating factor; E=1e-09 PFAM: PF00657; Lipase/Acylhydrolase with GDSL-li; E=0.00082 PF02266; Platelet activating factor acetyl; E=0.00029; platelet-activating factor acetylhydrolase IB gamma subunit complement(780317..781096) Rhodopirellula baltica SH 1 1793927 NP_864465.1 CDS slr0309 NC_005027.1 781095 782537 D PMID: 8590279 best DB hits: BLAST: swissprot:Q55914; Y309_SYNY3 HYPOTHETICAL METHYLTRANSFERASE; E=3e-26 swissprot:O58549; Y819_PYRHO HYPOTHETICAL METHYLTRANSFERASE PH0819; E=1e-23 swissprot:P42349; YC42_SYNY3 HYPOTHETICAL METHYLTRANSFERASE; E=2e-18 COG: slr0309; COG1032 Fe-S oxidoreductases family 2; E=3e-27; methyltransferase 781095..782537 Rhodopirellula baltica SH 1 1795498 NP_864466.1 CDS RB1531 NC_005027.1 782534 783889 D hypothetical protein 782534..783889 Rhodopirellula baltica SH 1 1792010 NP_864467.1 CDS pknA NC_005027.1 783980 785953 R PMID: 8969512 best DB hits: BLAST: pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=4e-36 swissprot:P54743; PKNA_MYCLE SERINETHREONINE-PROTEIN; E=7e-36 swissprot:P71585; PKNA_MYCTU SERINETHREONINE-PROTEIN; E=1e-35 COG: Rv0015c; COG0515 Serine/threonine protein kinases; E=1e-36 PFAM: PF00069; Protein kinase domain; E=2.4e-61; serine/threonine-protein kinase pknA complement(783980..785953) Rhodopirellula baltica SH 1 1795412 NP_864468.1 CDS RB1533 NC_005027.1 785889 787091 R PMID: 8843436 best DB hits: BLAST: embl:CAB55728.1; (AL117387) hypothetical protein SCF41.25; E=1e-13 ddbj:BAA87752.1; (AB016260) Hypothetical gene [Agrobacterium; E=3e-06; hypothetical protein complement(785889..787091) Rhodopirellula baltica SH 1 1791053 NP_864469.1 CDS RB1535 NC_005027.1 787199 788518 D hypothetical protein 787199..788518 Rhodopirellula baltica SH 1 1795143 NP_864470.1 CDS lysA NC_005027.1 788614 790083 R PMID: 9163424 best DB hits: BLAST: gb:AAG45731.1; AF229441_2 (AF229441) y4yA [Sinorhizobium fredii]; E=7e-30 swissprot:P55709; Y4YA_RHISN HYPOTHETICAL 49.9 KD PROTEIN Y4YA; E=3e-29 gb:AAG45729.1; AF229440_2 (AF229440) y4yA [Sinorhizobium fredii]; E=3e-26 COG: sll0504; COG0019 Diaminopimelate decarboxylase; E=7e-08 PFAM: PF02784; Pyridoxal-dependent decarboxyla; E=0.71; diaminopimelate decarboxylase complement(788614..790083) Rhodopirellula baltica SH 1 1790706 NP_864471.1 CDS RB1542 NC_005027.1 790376 790627 R hypothetical protein complement(790376..790627) Rhodopirellula baltica SH 1 1794046 NP_864472.1 CDS gspD NC_005027.1 790598 794395 D PMID: 2677007 best DB hits: BLAST: swissprot:P45758; GSPD_ECOLI PROBABLE GENERAL SECRETION PATHWAY; E=5e-22 swissprot:P15644; GSPD_KLEPN GENERAL SECRETION PATHWAY PROTEIN D; E=2e-21 gb:AAA58785.1; (L33796) EpsD [Vibrio cholerae]; E=2e-18 COG: gspD; COG1450 General secretory pathway protein D; E=5e-23 PFAM: PF00263; Bacterial type II and III secret; E=2.9e-05; general secretion pathway protein D 790598..794395 Rhodopirellula baltica SH 1 1793420 NP_864473.1 CDS RB1549 NC_005027.1 794448 794738 D hypothetical protein 794448..794738 Rhodopirellula baltica SH 1 1791048 NP_864474.1 CDS RB1550 NC_005027.1 794665 795552 D signal peptide 794665..795552 Rhodopirellula baltica SH 1 1793533 NP_864475.1 CDS RB1553 NC_005027.1 795468 795656 R hypothetical protein complement(795468..795656) Rhodopirellula baltica SH 1 1796166 NP_864476.1 CDS RB1554 NC_005027.1 795676 795897 D hypothetical protein 795676..795897 Rhodopirellula baltica SH 1 1794257 NP_864477.1 CDS RB1555 NC_005027.1 795848 797278 R PMID: 10484179 best DB hits: BLAST: gb:AAC23913.1; (AF039207) NADH-dependent dehydrogenase homolog; E=1e-09 ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=1e-08 swissprot:Q54728; YJHC_STRPN HYPOTHETICAL PROTEIN IN NANB 3'REGION; E=3e-07 COG: BH1248; COG0673 Predicted dehydrogenases and related proteins; E=9e-10 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=3.2e-12; NADH-dependent dehydrogenase complement(795848..797278) Rhodopirellula baltica SH 1 1794839 NP_864478.1 CDS RB1557 NC_005027.1 797241 797420 D hypothetical protein 797241..797420 Rhodopirellula baltica SH 1 1793759 NP_864479.1 CDS pgaM NC_005027.1 797674 798255 R PMID: 9537320 best DB hits: BLAST: pir:A70471; phosphoglycerate mutase 1 - Aquifex aeolicus -----; E=4e-12 pir:A75439; probable phosphoglycerate mutase - Deinococcus; E=2e-11 pir:G72260; phosphoglycerate mutase - Thermotoga maritima (strain; E=2e-11 COG: aq_1990; COG0406 Phosphoglycerate mutase/fructose-2,6-bisphosphatase; E=4e-13 Rv2228c_2; COG0406 Phosphoglycerate; E=3e-05 slr1748; COG0406 Phosphoglycerate mutase/fructose-2,6-bisphosphatase; E=4e-05 PFAM: PF00300; Phosphoglycerate mutase; E=0.0029; phosphoglycerate mutase complement(797674..798255) Rhodopirellula baltica SH 1 1789925 NP_864480.1 CDS rpe NC_005027.1 798252 798959 R PMID: 10625676 best DB hits: BLAST: pir:G82052; ribulose-phosphate 3-epimerase VC2625 [imported] -; E=1e-42 gb:AAK03703.1; (AE006199) Dod [Pasteurella multocida]; E=1e-40 gb:AAF01048.1; AF189365_1 (AF189365) D-ribulose-5-phosphate; E=3e-40 COG: VC2625; COG0036 Pentose-5-phosphate-3-epimerase; E=1e-43 PFAM: PF00834; Ribulose-phosphate 3 epimerase; E=1.8e-85; ribulose-phosphate 3-epimerase complement(798252..798959) Rhodopirellula baltica SH 1 1796370 NP_864481.1 CDS RB1563 NC_005027.1 798934 799344 D PMID: 10617197 best DB hits: BLAST: gb:AAC79586.1; (AC005727) DOF zinc finger protein; E=0.43; DOF zinc finger protein 798934..799344 Rhodopirellula baltica SH 1 1796852 NP_864482.1 CDS RB1565 NC_005027.1 799322 799552 R hypothetical protein complement(799322..799552) Rhodopirellula baltica SH 1 1790151 NP_864483.1 CDS comQ NC_005027.1 799608 803093 R PMID: 10419967 best DB hits: BLAST: gb:AAK00351.1; AF329876_7 (AF329876) outer membrane protein; E=2e-10 embl:CAA32520.1; (X14336) gene IV product [Bacteriophage I2-2]; E=2e-08 pir:D82816; fimbrial assembly protein XF0373 [imported] - Xylella; E=4e-05 COG: XF0373; COG1450 General secretory pathway protein D; E=3e-06 PFAM: PF00263; Bacterial type II and III secretion; E=5.3e-20; general secretory pathway protein D complement(799608..803093) Rhodopirellula baltica SH 1 1794932 NP_864484.1 CDS dnlI NC_005027.1 803159 804853 D catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA; ATP-dependent DNA ligase 803159..804853 Rhodopirellula baltica SH 1 1795706 NP_864485.1 CDS RB1572 NC_005027.1 804850 804993 D hypothetical protein 804850..804993 Rhodopirellula baltica SH 1 1790724 NP_864486.1 CDS RB1573 NC_005027.1 804984 805094 R hypothetical protein complement(804984..805094) Rhodopirellula baltica SH 1 1794588 NP_864487.1 CDS sgbU NC_005027.1 805112 806164 R PMID: 8041620 best DB hits: BLAST: pir:S47803; hypothetical 33.7K protein (avtA-selB intergenic region); E=8e-07 swissprot:P37679; SGBU_ECOLI HEXULOSE-6-PHOSPHATE; E=8e-07 swissprot:P39305; SGAU_ECOLI HEXULOSE-6-PHOSPHATE; E=1e-05 COG: sgbU; COG1082 Predicted endonucleases; E=7e-08 PFAM: PF01319; Cholesterol oxidase; E=0.042; hexulose-6-phosphate isomerase complement(805112..806164) Rhodopirellula baltica SH 1 1795657 NP_864488.1 CDS helX NC_005027.1 806289 808871 D PMID: 8688087 best DB hits: BLAST: pir:D75091; large helicase-related protein (lhr-2) PAB0744 -; E=1e-73 ref:NP_071281.1; large helicase-related protein (lhr-2); E=4e-71 swissprot:Q57742; HELX_METJA ATP-DEPENDENT HELICASE; E=1e-70 COG: PAB0744; COG1201 Lhr-like helicases; E=1e-74 BS_yprA; COG1205 Distinct helicase with a unique C-terminal; E=5e-18 PFAM: PF00270; DEAD/DEAH box helicase; E=2.1e-16 PF00271; Helicase conserved C-terminal doma; E=5.5e-14; ATP-dependent helicase 806289..808871 Rhodopirellula baltica SH 1 1795716 NP_864489.1 CDS glnS NC_005027.1 808911 810716 D catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 808911..810716 Rhodopirellula baltica SH 1 1794210 NP_864490.1 CDS RB1579 NC_005027.1 810888 812492 R PMID: 7765282 best DB hits: BLAST: swissprot:P42663; CTAQ_THEAQ THERMOSTABLE CARBOXYPEPTIDASE 1; E=1e-105 swissprot:P50848; YPWA_BACSU HYPOTHETICAL 58.2 KDA PROTEIN IN; E=2e-90 gb:AAG20654.1; (AE005134) probable carboxypeptidase; Cxp; E=7e-90 COG: BS_ypwA; COG2317 Zn-dependent carboxypeptidases; E=2e-91 PFAM: PF02074; Carboxypeptidase Taq (M32) meta; E=2.1e-164; thermostable carboxypeptidase 1 complement(810888..812492) Rhodopirellula baltica SH 1 1790496 NP_864491.1 CDS RB1581 NC_005027.1 812517 814265 R hypothetical protein complement(812517..814265) Rhodopirellula baltica SH 1 1794535 NP_864492.1 CDS hisD NC_005027.1 814354 815736 D PMID: 9537320 best DB hits: BLAST: ddbj:BAB07301.1; (AP001519) histidinol dehydrogenase [Bacillus; E=4e-88 swissprot:O66976; HISX_AQUAE HISTIDINOL DEHYDROGENASE (HDH); E=1e-87 gb:AAK05307.1; AE006353_6 (AE006353) histidinol dehydrogenase (EC; E=2e-85 COG: BH3582; COG0141 Histidinol dehydrogenase; E=4e-89 PFAM: PF00815; Histidinol dehydrogenase; E=2.7e-158; histidinol dehydrogenase 814354..815736 Rhodopirellula baltica SH 1 1789901 NP_864493.1 CDS fabF NC_005027.1 815812 817197 D PMID: 8550484 best DB hits: BLAST: pir:T12022; 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); E=1e-50 pir:G81224; 3-oxoacyl-(acyl-carrier-protein) synthase II NMB0219; E=3e-48 pir:F81995; 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); E=7e-48 COG: PA2965; COG0304 3-oxoacyl-(acyl-carrier-protein) synthase I; E=1e-51 PFAM: PF00109; Beta-ketoacyl synthase, N-ter; E=2.3e-05 PF02801; Beta-ketoacyl synthase, C-ter; E=7.8e-51; 3-oxoacyl-ACP synthase 815812..817197 Rhodopirellula baltica SH 1 1791037 NP_864494.1 CDS RB1588 NC_005027.1 817362 817817 D PMID: 8759840 best DB hits: BLAST: gb:AAB68774.1; (U94886) hemolysin [Brachyspira hyodysenteriae]; E=4e-04 embl:CAC08813.1; (AJ279022) acyl carrier protein; E=0.053 pir:T11213; probable acyl carrier protein - Streptomyces glaucescens; E=0.067; acyl carrier protein 817362..817817 Rhodopirellula baltica SH 1 1796685 NP_864495.1 CDS crtI NC_005027.1 817929 819323 D PMID: 2254247 best DB hits: BLAST: gb:AAF63149.1; AC011001_19 (AC011001) Similar to phytoene; E=7e-15 gb:AAG29233.1; AC079732_4 (AC079732) hypothetical protein; E=4e-12 ddbj:BAB05567.1; (AP001513) BH1848~unknown conserved protein in; E=6e-11 COG: BH1848; COG1233 Phytoene dehydrogenase and related proteins; E=6e-12 VC0806; COG2509 Uncharacterized FAD-dependent dehydrogenases; E=0.001 DR0093; COG1233 Phytoene dehydrogenase and related proteins; E=0.006 PFAM: PF02032; Phytoene dehydrogenase related; E=6.5e-05 PF01494; FAD binding domain; E=0.13 PF00070; Pyridine nucleotide-disulphide; E=2.2e-06; phytoene dehydrogenase 817929..819323 Rhodopirellula baltica SH 1 1796593 NP_864496.1 CDS icd NC_005027.1 819486 821717 D PMID: 4149369 best DB hits: BLAST: swissprot:P16100; IDH_AZOVI ISOCITRATE DEHYDROGENASE [NADP]; E=0.0 pir:B81143; isocitrate dehydrogenase NMB0920 [imported] - Neisseria; E=0.0 pir:B82236; isocitrate dehydrogenase VC1141 [imported] - Vibrio; E=0.0 COG: NMB0920; COG2838 Monomeric isocitrate dehydrogenase; E=0.0; isocitrate dehydrogenase 819486..821717 Rhodopirellula baltica SH 1 1793580 NP_864497.1 CDS RB1594 NC_005027.1 821695 821865 R hypothetical protein complement(821695..821865) Rhodopirellula baltica SH 1 1791879 NP_864498.1 CDS hioM NC_005027.1 821937 822953 D PMID: 1544900 best DB hits: BLAST: swissprot:P10950; HIOM_BOVIN HYDROXYINDOLE O-METHYLTRANSFERASE; E=1e-48 swissprot:Q92056; HIOM_CHICK HYDROXYINDOLE O-METHYLTRANSFERASE; E=3e-48 embl:CAA75675.1; (Y15521) start position 1 [Homo sapiens]; E=5e-47 COG: Rv0567; COG0500 SAM-dependent methyltransferases; E=7e-32 PFAM: PF01047; MarR family; E=0.1 PF01022; Bacterial regulatory protein,; E=0.82 PF00891; O-methyltransferase; E=7.5e-53; hydroxyindole O-methyltransferase 821937..822953 Rhodopirellula baltica SH 1 1793699 NP_864499.1 CDS RB1597 NC_005027.1 823056 823589 R PMID: 8037924 best DB hits: BLAST: swissprot:P30176; YBIA_ECOLI HYPOTHETICAL 18.7 KDA PROTEIN IN; E=3e-34 pir:A75416; conserved hypothetical protein - Deinococcus radiodurans; E=4e-05 pir:B83074; conserved hypothetical protein PA4580 [imported] -; E=1e-04 COG: ybiA; COG3236 Uncharacterized BCR; E=3e-35; hypothetical protein complement(823056..823589) Rhodopirellula baltica SH 1 1793778 NP_864500.1 CDS RB1599 NC_005027.1 823780 824676 D signal peptide 823780..824676 Rhodopirellula baltica SH 1 1796704 NP_864501.1 CDS RB1601 NC_005027.1 824636 824863 R hypothetical protein complement(824636..824863) Rhodopirellula baltica SH 1 1793853 NP_864502.1 CDS RB1602 NC_005027.1 824894 825262 R hypothetical protein complement(824894..825262) Rhodopirellula baltica SH 1 1791089 NP_864503.1 CDS RB1603 NC_005027.1 824944 825177 R hypothetical protein complement(824944..825177) Rhodopirellula baltica SH 1 1790963 NP_864504.1 CDS RB1604 NC_005027.1 825174 826373 R best DB hits: BLAST: pir:D69820; hypothetical protein yhaZ - Bacillus subtilis -----; E=8e-39 embl:CAB40602.1; (AJ010140) DNA alkylation repair enzyme; E=2e-33 gb:AAK03834.1; (AE006212) unknown [Pasteurella multocida]; E=6e-17; hypothetical protein complement(825174..826373) Rhodopirellula baltica SH 1 1794551 NP_864505.1 CDS RB1606 NC_005027.1 826325 827041 R PMID: 8156986 best DB hits: BLAST: pir:H83380; O6-methylguanine-DNA methyltransferase PA2118 [imported]; E=9e-29 gb:AAA23413.1; (M10315) Ada polyprotein [Escherichia coli]; E=7e-26 pdb:1SFE; Ada O6-Methylguanine-Dna Methyltransferase From; E=7e-26 COG: PA2118_2; COG0350 Methylated DNA-protein cysteine methyltransferase; E=5e-29 PFAM: PF01035; 6-O-methylguanine DNA methyltr; E=3.9e-33; O-6-methylguanine-DNA methyltransferase (ada) complement(826325..827041) Rhodopirellula baltica SH 1 1796851 NP_864506.1 CDS RB1608 NC_005027.1 827078 828247 R PMID: 8843436 best DB hits: BLAST: embl:CAC16441.1; (AL450165) esterase [Streptomyces; E=2e-40 pir:A69744; beta-lactamase homolog ybbE - Bacillus subtilis -----; E=5e-37 embl:CAB94057.1; (AL358672) secreted protein.; E=3e-32 COG: BS_ybbE; COG1680 Beta-lactamase class C and other penicillin binding; E=5e-38; esterase complement(827078..828247) Rhodopirellula baltica SH 1 1795652 NP_864507.1 CDS RB1609 NC_005027.1 828234 828545 D hypothetical protein 828234..828545 Rhodopirellula baltica SH 1 1794288 NP_864508.1 CDS aslA NC_005027.1 828556 830181 D PMID: 7744061 best DB hits: BLAST: pir:S69336; arylsulfatase (EC 3.1.6.1) - Pseudomonas aeruginosa; E=4e-77 swissprot:P51691; ARS_PSEAE ARYLSULFATASE (ARYL-SULFATE; E=1e-76 gb:AAF71375.1; AF262989_2 (AF262989) arylsulfatase [Klebsiella; E=6e-57 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=9e-78 PFAM: PF00884; Sulfatase; E=3.2e-102; arylsulfatase 828556..830181 Rhodopirellula baltica SH 1 1795984 NP_864509.1 CDS RB1611 NC_005027.1 830421 833492 R best DB hits: PFAM: PF00882; Zinc dependent phospholipase C; E=0.41; hypothetical protein complement(830421..833492) Rhodopirellula baltica SH 1 1791664 NP_864510.1 CDS RB1617 NC_005027.1 833623 834021 R hypothetical protein complement(833623..834021) Rhodopirellula baltica SH 1 1794035 NP_864511.1 CDS RB1618 NC_005027.1 833743 834036 D PMID: 8843436 best DB hits: BLAST: embl:CAB95808.1; (AL359949) large transcriptional; E=0.35; transcriptional regulator 833743..834036 Rhodopirellula baltica SH 1 1792106 NP_864512.1 CDS RB1621 NC_005027.1 834309 835361 R PMID: 11756688 best DB hits: BLAST: pir:A82542; conserved hypothetical protein XF2574 [imported] -; E=0.028 pir:T29446; hypothetical protein - Streptomyces coelicolor -----; E=0.57 COG: XF2574; COG0671 Membrane-associated phospholipid phosphatase; E=0.003 PFAM: PF01569; PAP2 superfamily; E=0.00063; hypothetical protein complement(834309..835361) Rhodopirellula baltica SH 1 1792487 NP_864513.1 CDS RB1624 NC_005027.1 835452 835745 R hypothetical protein complement(835452..835745) Rhodopirellula baltica SH 1 1795946 NP_864514.1 CDS RB1628 NC_005027.1 835894 836406 D PMID: 10761919 best DB hits: BLAST: pir:G81831; probable integral membrane protein NMA2020 [imported] -; E=0.43 pir:F81195; conserved hypothetical protein NMB0465 [imported] -; E=0.55; hypothetical protein 835894..836406 Rhodopirellula baltica SH 1 1791438 NP_864515.1 CDS glcK NC_005027.1 836521 837594 D PMID: 9620975 best DB hits: BLAST: pir:T44787; glucokinase (EC 2.7.1.2) [imported] - Bacillus; E=3e-32 swissprot:P54495; GLK_BACSU GLUCOKINASE (GLUCOSE KINASE) -----; E=8e-32 ddbj:BAB04516.1; (AP001509) glucose kinase [Bacillus halodurans]; E=4e-30 COG: BS_glcK; COG1940 Transcriptional regulators; E=8e-33 PFAM: PF00370; FGGY family of carbohydrate kinases; E=0.071 PF00480; ROK family; E=3.3e-37; glucokinase 836521..837594 Rhodopirellula baltica SH 1 1791051 NP_864516.1 CDS lepA NC_005027.1 837642 839456 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 837642..839456 Rhodopirellula baltica SH 1 1790658 NP_864517.1 CDS RB1632 NC_005027.1 839673 840332 D hypothetical protein 839673..840332 Rhodopirellula baltica SH 1 1793882 NP_864518.1 CDS RB1633 NC_005027.1 840418 840678 R hypothetical protein complement(840418..840678) Rhodopirellula baltica SH 1 1794030 NP_864519.1 CDS RB1634 NC_005027.1 840611 841732 D hypothetical protein 840611..841732 Rhodopirellula baltica SH 1 1791296 NP_864520.1 CDS RB1636 NC_005027.1 841696 841806 R hypothetical protein complement(841696..841806) Rhodopirellula baltica SH 1 1793729 NP_864521.1 CDS RB1637 NC_005027.1 841858 842517 D PMID: 8843436 best DB hits: BLAST: embl:CAB61668.1; (AL133213) glycosyl transferase.; E=4e-32 embl:CAC15463.1; (AJ294477) polyprenol phosphate; E=7e-29 embl:CAB11300.1; (Z98604) hypothetical protein MLCB2052.02; E=1e-28 COG: Rv2051c_2; COG0463 Glycosyltransferases involved in cell wall; E=2e-29 PFAM: PF00535; Glycosyl transferase; E=1.6e-19; glycosyl transferase 841858..842517 Rhodopirellula baltica SH 1 1796578 NP_864522.1 CDS RB1638 NC_005027.1 842521 842718 D hypothetical protein 842521..842718 Rhodopirellula baltica SH 1 1797114 NP_864523.1 CDS RB1639 NC_005027.1 842623 844422 R PMID: 11823852 best DB hits: BLAST: gb:AAF54264.1; (AE003680) CG8032 gene product [Drosophila; E=0.033 embl:CAB59668.1; (AL132674) monooxygenase. [Streptomyces; E=0.19 pir:A83453; probable flavin-containing monooxygenase PA1538; E=0.44 PFAM: PF01494; FAD binding domain; E=0.0018 PF00070; Pyridine nucleotide-disulphide; E=0.013 PF01593; Flavin containing amine oxidase; E=0.25; monooxygenase complement(842623..844422) Rhodopirellula baltica SH 1 1796872 NP_864524.1 CDS RB1641 NC_005027.1 844308 845327 R PMID: 8905231 best DB hits: BLAST: pir:S74922; hypothetical protein slr0681 - Synechocystis sp. (strain; E=8e-56 pir:H82064; conserved hypothetical protein VC2522 [imported] -; E=2e-33 gb:AAK02512.1; (AE006079) unknown [Pasteurella multocida]; E=8e-33 COG: slr0681; COG0530 Ca2+/Na+ antiporter; E=7e-57 PFAM: PF01699; Sodium/calcium exchanger protein; E=6.8e-32; sodium/calcium antiporter complement(844308..845327) Rhodopirellula baltica SH 1 1796632 NP_864525.1 CDS RB1644 NC_005027.1 845453 845824 R signal peptide complement(845453..845824) Rhodopirellula baltica SH 1 1790757 NP_864526.1 CDS RB1646 NC_005027.1 845881 846090 R hypothetical protein complement(845881..846090) Rhodopirellula baltica SH 1 1793936 NP_864527.1 CDS RB1648 NC_005027.1 846118 846423 R hypothetical protein complement(846118..846423) Rhodopirellula baltica SH 1 1793111 NP_864528.1 CDS RB1649 NC_005027.1 846528 846692 D hypothetical protein 846528..846692 Rhodopirellula baltica SH 1 1795360 NP_864529.1 CDS RB1650 NC_005027.1 846661 847752 R signal peptide complement(846661..847752) Rhodopirellula baltica SH 1 1796716 NP_864530.1 CDS RB1651 NC_005027.1 847756 848766 D PMID: 8688087 best DB hits: BLAST: swissprot:Q57970; Y550_METJA HYPOTHETICAL PROTEIN MJ0550 -----; E=2e-04 gb:AAG20125.1; (AE005091) Vng1941c [Halobacterium sp. NRC-1]; E=0.006 gb:AAB90230.1; (AE001034) conserved hypothetical protein; E=0.15 COG: MJ0550; COG1244 Predicted Fe-S oxidoreductases; E=2e-05; Fe-S oxidoreductase 847756..848766 Rhodopirellula baltica SH 1 1795235 NP_864531.1 CDS prnC NC_005027.1 848744 850276 D PMID: 8843436 best DB hits: BLAST: gb:AAB97506.1; (U74493) halogenase PrnC [Pseudomonas fluorescens]; E=3e-22 gb:AAD46367.1; AF161185_2 (AF161185) PrnC [Myxococcus fulvus]; E=1e-21 gb:AAD46372.1; AF161186_3 (AF161186) PrnC [Burkholderia; E=2e-21 PFAM: PF01494; FAD binding domain; E=0.009 PF01224; FAD-dependent glycerol-3-phos; E=0.048 PF00070; Pyridine nucleotide-disulphid; E=0.0082; halogenase 848744..850276 Rhodopirellula baltica SH 1 1792380 NP_864532.1 CDS RB1656 NC_005027.1 850438 853065 R PMID: 10984043 best DB hits: BLAST: pir:C83287; hypothetical protein PA2870 [imported] - Pseudomonas; E=4e-29 pir:H70302; conserved hypothetical protein aq_035 - Aquifex aeolicus; E=1e-26 pir:A71678; probable response regulatory protein RP237 - Rickettsia; E=9e-24 COG: PA2870; COG2199 Diguanylate cyclase/phosphodiesterase domain 1; E=4e-30 TM1594; COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF); E=1e-22 PA0290_2; COG2199 Diguanylate cyclase/phosphodiesterase domain 1; E=1e-22 PFAM: PF00989; PAS domain; E=2.5e-05 PF00990; GGDEF domain; E=5.9e-52 PF01966; HD domain; E=1.2e-17; hypothetical protein complement(850438..853065) Rhodopirellula baltica SH 1 1793849 NP_864533.1 CDS RB1661 NC_005027.1 853319 876469 R PMID: 96163873 best DB hits: BLAST: embl:CAA60685.1; (X87241) homologue of Drosophila Fat protein [Homo; E=3e-18 embl:CAB65271.1; (AJ250768) mouse fat 1 cadherin [Mus musculus]; E=1e-17 PFAM: PF00054; Laminin G domain; E=0.3 PF00354; Pentaxin family; E=3.9e-10 PF00059; Lectin C-type domain; E=0.00071; hypothetical protein complement(853319..876469) Rhodopirellula baltica SH 1 1792276 NP_864534.1 CDS RB1677 NC_005027.1 876145 878211 D best DB hits: PFAM: PF02321; Outer membrane efflux protein; E=5.9e-09; hypothetical protein 876145..878211 Rhodopirellula baltica SH 1 1793052 NP_864535.1 CDS czcB NC_005027.1 878180 879145 D PMID: 9537320 best DB hits: BLAST: pir:C70415; cation efflux system (czcB-like) - Aquifex aeolicus; E=1e-10 gb:AAK03081.1; (AE006139) unknown [Pasteurella multocida]; E=7e-09 pir:B82357; conserved hypothetical protein VC0165 [imported] -; E=5e-08 COG: aq_1331; COG0845 Membrane-fusion protein; E=1e-11 ydhJ; COG1566 Multidrug resistance efflux pump; E=7e-06 XF0244; COG0845 Membrane-fusion protein; E=3e-05 PFAM: PF00364; Biotin-requiring enzyme; E=0.14 PF00529; HlyD family secretion protein; E=0.0021; cation efflux system (czcB-like) 878180..879145 Rhodopirellula baltica SH 1 1789980 NP_864536.1 CDS RB1682 NC_005027.1 879132 879287 R hypothetical protein complement(879132..879287) Rhodopirellula baltica SH 1 1796513 NP_864537.1 CDS RB1685 NC_005027.1 879292 880590 D PMID: 11466286 best DB hits: BLAST: ddbj:BAA96518.1; (AB044351) ORFE [Pseudomonas syringae]; E=9e-04 pir:D82709; colicin V secretion protein XF1216 [imported] - Xylella; E=0.002 pir:B83186; probable RND efflux membrane fusion protein precursor; E=0.003 COG: XF1216; COG0845 Membrane-fusion protein; E=2e-04 PA3136; COG1566 Multidrug resistance efflux pump; E=0.003 PA4374; COG0845 Membrane-fusion protein; E=0.007 PFAM: PF00529; HlyD family secretion protein; E=0.034; hypothetical protein 879292..880590 Rhodopirellula baltica SH 1 1791999 NP_864538.1 CDS RB1688 NC_005027.1 880530 882947 D PMID: 7542800 best DB hits: BLAST: pir:G64100; hypothetical protein HI0894 - Haemophilus influenzae; E=0.077 swissprot:Q57500; Y894_HAEIN HYPOTHETICAL PROTEIN HI0894 -----; E=0.077 COG: HIN0311; COG0845 Membrane-fusion protein; E=0.007 PFAM: PF02163; Sterol-regulatory element bind; E=0.011 PF00364; Biotin-requiring enzyme; E=0.088; hypothetical protein 880530..882947 Rhodopirellula baltica SH 1 1792801 NP_864539.1 CDS RB1691 NC_005027.1 883025 885748 R signal peptide complement(883025..885748) Rhodopirellula baltica SH 1 1790817 NP_864540.1 CDS RB1695 NC_005027.1 885645 886064 R hypothetical protein complement(885645..886064) Rhodopirellula baltica SH 1 1793314 NP_864541.1 CDS RB1696 NC_005027.1 886018 887502 R PMID: 8688087 best DB hits: BLAST: swissprot:Q57571; Y107_METJA HYPOTHETICAL PROTEIN MJ0107 -----; E=5e-21 gb:AAB89833.1; (AE001006) dihydropteroate synthase [Archaeoglobus; E=1e-20 pir:H69099; conserved hypothetical protein MTH1741 -; E=1e-16 COG: MJ0107; COG0294 Dihydropteroate synthase; E=5e-22; dihydropteroate synthase complement(886018..887502) Rhodopirellula baltica SH 1 1797049 NP_864542.1 CDS RB1699 NC_005027.1 887580 888584 R signal peptide complement(887580..888584) Rhodopirellula baltica SH 1 1794950 NP_864543.1 CDS RB1703 NC_005027.1 888722 889426 R PMID: 10567266 best DB hits: BLAST: gb:AAG58375.1; AE005552_5 (AE005552) orf, hypothetical protein; E=7e-18 swissprot:P25536; YHDE_ECOLI PROTEIN YHDE ----- pir: JQ1271; E=1e-17 gb:AAA58051.1; (U18997) ORF_f217; orfE of ECMRED, uses 2nd start; E=1e-17 COG: yhdE; COG0424 Nucleotide-binding protein implicated in inhibition of; E=1e-18 BH3033; COG0424 Nucleotide-binding protein implicated in inhibition; E=2e-18 yceF; COG0424 Nucleotide-binding protein implicated in inhibition of; E=4e-08 PFAM: PF02545; Maf-like protein; E=9.4e-36; maf protein complement(888722..889426) Rhodopirellula baltica SH 1 1796012 NP_864544.1 CDS RB1704 NC_005027.1 889423 889617 R hypothetical protein complement(889423..889617) Rhodopirellula baltica SH 1 1790842 NP_864545.1 CDS RB1705 NC_005027.1 889577 889921 D hypothetical protein 889577..889921 Rhodopirellula baltica SH 1 1794156 NP_864546.1 CDS dnaA NC_005027.1 889863 891638 D PMID: 8288535 best DB hits: BLAST: swissprot:P35887; DNAA_CAUCR CHROMOSOMAL REPLICATION INITIATOR; E=7e-35 gb:AAD42393.1; AF157493_1 (AF157493) chromosomal replication; E=2e-34 swissprot:P05648; DNAA_BACSU CHROMOSOMAL REPLICATION INITIATOR; E=4e-33 COG: BS_dnaA; COG0593 ATPase involved in DNA replication initiation; E=4e-34 PFAM: PF00004; ATPase associated with vari; E=0.014 PF00308; Bacterial dnaA protein; E=2.7e-42; chromosome replication initiator DnaA 889863..891638 Rhodopirellula baltica SH 1 1792727 NP_864547.1 CDS dnaB NC_005027.1 891742 893190 D PMID: 7584024 best DB hits: BLAST: pir:T36598; probable replicative DNA helicase - Streptomyces; E=4e-86 pir:G75504; replicative DNA helicase - Deinococcus radiodurans; E=2e-83 gb:AAD19901.1; (AF100420) DnaB replication fork helicase [Thermus; E=1e-80 COG: DR0549; COG0305 Replicative DNA helicase; E=2e-84 PFAM: PF00772; DnaB-like helicase; E=2.9e-138; replicative DNA helicase 891742..893190 Rhodopirellula baltica SH 1 1790696 NP_864548.1 CDS RB1709 NC_005027.1 893245 893643 R hypothetical protein complement(893245..893643) Rhodopirellula baltica SH 1 1792033 NP_864549.1 CDS RB1711 NC_005027.1 893669 894961 R PMID: 10984043 best DB hits: BLAST: ddbj:BAA14000.1; (D89625) adenylate cyclase [Anabaena sp.]; E=3e-17 pir:T17197; adenylate cyclase homolog - Spirulina platensis -----; E=1e-16 embl:CAC01253.1; (AJ243734) hydrogenase transcriptional; E=1e-13 COG: PA2572; COG2204 AAA superfamily ATPases with N-terminal receiver; E=6e-13 VC1087_1; COG0784 CheY-like receiver domains; E=7e-10 VCA0142; COG2204 AAA superfamily ATPases with N-terminal receiver; E=3e-08 PFAM: PF00072; Response regulator receiver doma; E=4.4e-17; two-component response regulator complement(893669..894961) Rhodopirellula baltica SH 1 1796210 NP_864550.1 CDS RB1713 NC_005027.1 895046 895279 R hypothetical protein complement(895046..895279) Rhodopirellula baltica SH 1 1794946 NP_864551.1 CDS RB1714 NC_005027.1 895216 895536 D hypothetical protein 895216..895536 Rhodopirellula baltica SH 1 1794306 NP_864552.1 CDS RB1716 NC_005027.1 895557 895805 R hypothetical protein complement(895557..895805) Rhodopirellula baltica SH 1 1790304 NP_864553.1 CDS RB1717 NC_005027.1 895876 897501 R PMID: 11214968; signal peptide complement(895876..897501) Rhodopirellula baltica SH 1 1796891 NP_864554.1 CDS RB1721 NC_005027.1 897548 897697 R hypothetical protein complement(897548..897697) Rhodopirellula baltica SH 1 1796255 NP_864555.1 CDS RB1722 NC_005027.1 897688 899643 D PMID: 2402464 best DB hits: BLAST: swissprot:P23701; OM6_CHLPS 60 KDA OUTER MEMBRANE PROTEIN; E=2e-05 pir:B39439; 60K cysteine-rich outer membrane protein 1 precursor -; E=2e-05 pir:JC5204; 60K cysteine-rich outer membrane protein 2 precursor -; E=2e-05; hypothetical protein 897688..899643 Rhodopirellula baltica SH 1 1797021 NP_864556.1 CDS RB1726 NC_005027.1 899633 899926 R hypothetical protein complement(899633..899926) Rhodopirellula baltica SH 1 1790524 NP_864557.1 CDS RB1728 NC_005027.1 899954 900811 D PMID: 8867804 best DB hits: BLAST: swissprot:P39139; YXXB_BACSU HYPOTHETICAL 31.8 KD PROTEIN IN DEOR; E=6e-24 pir:S49453; hypothetical protein - Bacillus subtilis ----- embl:; E=4e-04; hypothetical protein 899954..900811 Rhodopirellula baltica SH 1 1796173 NP_864558.1 CDS RB1729 NC_005027.1 900784 901146 R PMID: 9698324 best DB hits: BLAST: gb:AAC31910.1; (AF076291) Rab-GDP dissociation inhibitor [Gallus; E=0.081 embl:CAA52412.1; (X74401) rab GDI beta [Rattus norvegicus]; E=0.36 gb:AAA78786.1; (L36314) GDP dissociation inhibitor beta [Mus; E=0.36; Rab-GDP dissociation inhibitor complement(900784..901146) Rhodopirellula baltica SH 1 1794232 NP_864559.1 CDS RB1731 NC_005027.1 901162 902025 D PMID: 10710307 best DB hits: BLAST: pir:D81118; conserved hypothetical protein ankyrin-related protein; E=3e-42 pir:C81903; hypothetical protein NMA1343 [imported] - Neisseria; E=9e-28 gb:AAF61702.1; AF222766_1 (AF222766) ankyrin 1 [Bos taurus]; E=1e-05 COG: NMB1133_2; COG0666 Ankyrin repeat proteins; E=7e-05 PFAM: PF00023; Ank repeat; E=0.0093; ankyrin-like protein 901162..902025 Rhodopirellula baltica SH 1 1795638 NP_864560.1 CDS RB1732 NC_005027.1 902108 903019 D PMID: 10910347 best DB hits: BLAST: pir:H82556; beta-alanine synthetase XF2443 [imported] - Xylella; E=6e-16 pir:G75156; hypothetical protein PAB0277 - Pyrococcus abyssi (strain; E=3e-13 gb:AAF87102.1; AF284573_1 (AF284573) Nit protein 2 [Mus musculus]; E=4e-12 COG: XF2443; COG0388 Predicted amidohydrolase; E=6e-17 PFAM: PF00795; Carbon-nitrogen hydrolase; E=1.2e-40; beta-alanine synthetase 902108..903019 Rhodopirellula baltica SH 1 1796515 NP_864561.1 CDS RB1734 NC_005027.1 902989 903450 D hypothetical protein 902989..903450 Rhodopirellula baltica SH 1 1791393 NP_864562.1 CDS RB1736 NC_005027.1 903453 905321 R PMID: 10336424 best DB hits: BLAST: gb:AAF30402.1; AF109924_1 (AF109924) sulfatase 1 precursor [Helix; E=2e-35 gb:AAF71377.1; AF262990_2 (AF262990) arylsulfatase [Klebsiella; E=2e-30 gb:AAF71375.1; AF262989_2 (AF262989) arylsulfatase [Klebsiella; E=3e-30 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=2e-23 yejM; COG3083 Predicted hydrolase of alkaline phosphatase; E=0.008 PFAM: PF00884; Sulfatase; E=5e-46; arylsulfatase complement(903453..905321) Rhodopirellula baltica SH 1 1790700 NP_864563.1 CDS RB1739 NC_005027.1 905535 906599 D PMID: 9634230 best DB hits: BLAST: pir:A70710; hypothetical protein Rv0790c - Mycobacterium; E=8e-07 pir:A69206; hypothetical protein MTH795 - Methanobacterium; E=2e-05 pir:D70818; hypothetical protein Rv1673c - Mycobacterium; E=2e-05 COG: Rv0790c; COG1305 transglutaminases, cysteine; E=8e-08 PFAM: PF01841; Transglutaminase-like superfam; E=9e-08; hypothetical protein 905535..906599 Rhodopirellula baltica SH 1 1794266 NP_864564.1 CDS pyrK NC_005027.1 906681 907538 D PMID: 7516791 best DB hits: BLAST: swissprot:P46536; PYRK_BACCL DIHYDROOROTATE DEHYDROGENASE ELECTRON; E=1e-21 swissprot:Q58841; PYRK_METJA PROBABLE DIHYDROOROTATE DEHYDROGENASE; E=1e-17 swissprot:O27280; PYRK_METTH PROBABLE DIHYDROOROTATE DEHYDROGENASE; E=1e-16 COG: MJ1446; COG0543 2-polyprenylphenol hydroxylase and related; E=1e-18 PFAM: PF00970; Oxidoreductase FAD-binding doma; E=0.3; dihydroorotate dehydrogenase electron transfer subunit 906681..907538 Rhodopirellula baltica SH 1 1790539 NP_864565.1 CDS RB1743 NC_005027.1 907629 908654 R best DB hits: BLAST: pir:E82656; conserved hypothetical protein XF1630 [imported] -; E=5e-06 pir:T35300; probable transcriptional regulator - Streptomyces; E=3e-04 pir:D69900; conserved hypothetical protein yobV - Bacillus subtilis; E=0.003 COG: XF1630; COG2378 Predicted transcriptional regulator; E=5e-07; transcriptional regulator complement(907629..908654) Rhodopirellula baltica SH 1 1793390 NP_864566.1 CDS RB1746 NC_005027.1 908757 909608 R hypothetical protein complement(908757..909608) Rhodopirellula baltica SH 1 1796858 NP_864567.1 CDS RB1748 NC_005027.1 909562 909759 R hypothetical protein complement(909562..909759) Rhodopirellula baltica SH 1 1792064 NP_864568.1 CDS RB1749 NC_005027.1 909615 909824 R hypothetical protein complement(909615..909824) Rhodopirellula baltica SH 1 1794496 NP_864569.1 CDS RB1750 NC_005027.1 909661 909837 D hypothetical protein 909661..909837 Rhodopirellula baltica SH 1 1796327 NP_864570.1 CDS RB1751 NC_005027.1 909821 910027 R hypothetical protein complement(909821..910027) Rhodopirellula baltica SH 1 1793851 NP_864571.1 CDS RB1753 NC_005027.1 910005 910466 D PMID: 10960085 best DB hits: BLAST: embl:CAB95035.1; (AJ272497) orf4 [Bacillus anthracis]; E=9e-12 pir:B83036; probable bacterioferritin PA4880 [imported] -; E=0.005 pir:G82332; bacterioferritin VC0365 [imported] - Vibrio cholerae; E=0.019 COG: PA4880; COG2193 Bacterioferritin (cytochrome b1); E=5e-04; hypothetical protein 910005..910466 Rhodopirellula baltica SH 1 1794396 NP_864572.1 CDS RB1756 NC_005027.1 910614 911624 R hypothetical protein complement(910614..911624) Rhodopirellula baltica SH 1 1792077 NP_864573.1 CDS RB1758 NC_005027.1 911615 912637 R best DB hits: PFAM: PF01351; Ribonuclease HII; E=0.11; hypothetical protein complement(911615..912637) Rhodopirellula baltica SH 1 1794019 NP_864574.1 CDS RB1759 NC_005027.1 912640 913938 R PMID: 10567266 best DB hits: BLAST: pir:E72220; conserved hypothetical protein - Thermotoga maritima; E=3e-39 pir:A75484; conserved hypothetical protein - Deinococcus radiodurans; E=1e-37 embl:CAB94603.1; (AL359214) integral membrane protein; E=2e-35 COG: DR0719; COG2206 HD-GYP domain; E=1e-38 PFAM: PF01590; GAF domain; E=0.4 PF01966; HD domain; E=1.8e-15; phosphohydrolase complement(912640..913938) Rhodopirellula baltica SH 1 1794192 NP_864575.1 CDS RB1760 NC_005027.1 914023 915210 R best DB hits: BLAST: gb:AAF28931.1; AF161371_1 (AF161371) HSPC253 [Homo sapiens]; E=0.33; hypothetical protein complement(914023..915210) Rhodopirellula baltica SH 1 1791905 NP_864576.1 CDS RB1764 NC_005027.1 915251 916207 R best DB hits: BLAST: gb:AAG59798.1; AF292097_4 (AF292097) SenB [Leptospira interrogans]; E=4e-06 gb:AAC23717.1; (AF031161) transcriptional activator [Pseudomonas; E=0.004 pir:C82379; response regulator VCA1086 [imported] - Vibrio cholerae; E=0.005 COG: VCA1086_2; COG2208 Serine phosphatase RsbU, regulator of sigma; E=5e-04 TP0995; COG0664 cAMP-binding domains - Catabolite gene activator and; E=0.002 PFAM: PF00072; Response regulator receiver doma; E=0.29 PF02518; Histidine kinase-, DNA gyrase B-; E=0.65; transcriptional regulator complement(915251..916207) Rhodopirellula baltica SH 1 1796148 NP_864577.1 CDS RB1766 NC_005027.1 916204 916317 R hypothetical protein complement(916204..916317) Rhodopirellula baltica SH 1 1794491 NP_864578.1 CDS RB1767 NC_005027.1 916336 919059 R PMID: 2402463 best DB hits: BLAST: swissprot:P23700; OM6_CHLPN 60 KDA OUTER MEMBRANE PROTEIN; E=8e-23 gb:AAG60550.1; (AF240773) 60 kDa cysteine-rich membrane complex; E=3e-21 swissprot:P26758; OM6C_CHLTR 60 KDA OUTER MEMBRANE PROTEIN,; E=5e-21; hypothetical protein complement(916336..919059) Rhodopirellula baltica SH 1 1791113 NP_864579.1 CDS RB1771 NC_005027.1 919273 919524 R hypothetical protein complement(919273..919524) Rhodopirellula baltica SH 1 1790117 NP_864580.1 CDS RB1773 NC_005027.1 919524 919760 R hypothetical protein complement(919524..919760) Rhodopirellula baltica SH 1 1794831 NP_864581.1 CDS RB1775 NC_005027.1 919757 919942 R hypothetical protein complement(919757..919942) Rhodopirellula baltica SH 1 1797054 NP_864582.1 CDS RB1776 NC_005027.1 919942 921096 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 919942..921096 Rhodopirellula baltica SH 1 1794284 NP_864583.1 CDS RB1778 NC_005027.1 921036 921245 R hypothetical protein complement(921036..921245) Rhodopirellula baltica SH 1 1793323 NP_864584.1 CDS RB1780 NC_005027.1 921306 923501 D PMID: 12024217 best DB hits: BLAST: ddbj:BAB05615.1; (AP001513) BH1896~unknown conserved protein; E=0.48; hypothetical protein 921306..923501 Rhodopirellula baltica SH 1 1796349 NP_864585.1 CDS RB1783 NC_005027.1 923436 923951 R hypothetical protein complement(923436..923951) Rhodopirellula baltica SH 1 1791679 NP_864586.1 CDS ugdH NC_005027.1 924070 925503 D PMID: 8938413 best DB hits: BLAST: pir:T51527; UDP-glucose dehydrogenase-like protein - Arabidopsis; E=1e-155 ddbj:BAB02581.1; (AP001309) UDP-glucose dehydrogenase; E=1e-151 swissprot:Q96558; UGDH_SOYBN UDP-GLUCOSE 6-DEHYDROGENASE (UDP-GLC; E=1e-150 COG: aq_024; COG1004 Predicted UDP-glucose 6-dehydrogenase; E=2e-61 VC0918; COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; E=1e-27 PA3540; COG1004 Predicted UDP-glucose 6-dehydrogenase; E=8e-26 PFAM: PF00984; UDP-glucose/GDP-mannose dehydro; E=2.6e-180; UDP-glucose 6-dehydrogenase 924070..925503 Rhodopirellula baltica SH 1 1796512 NP_864587.1 CDS RB1785 NC_005027.1 925466 925621 D hypothetical protein 925466..925621 Rhodopirellula baltica SH 1 1790420 NP_864588.1 CDS RB1787 NC_005027.1 925686 925904 R hypothetical protein complement(925686..925904) Rhodopirellula baltica SH 1 1795593 NP_864589.1 CDS RB1789 NC_005027.1 925861 926592 D PMID: 10484179 best DB hits: BLAST: ddbj:BAB05496.1; (AP001513) BH1777~unknown conserved protein; E=1e-04 ddbj:BAA14001.1; (D89626) adenylate cyclase [Anabaena sp.]; E=0.001 pir:B70700; hypothetical protein Rv0020c - Mycobacterium; E=0.003 COG: BH1777_1; COG1716 FHA-domain-containing proteins; E=5e-05 PFAM: PF00498; FHA domain; E=4.6e-18; hypothetical protein 925861..926592 Rhodopirellula baltica SH 1 1793367 NP_864590.1 CDS sigW NC_005027.1 926593 927168 D PMID: 9274029 best DB hits: BLAST: pir:H70507; probable sigE protein - Mycobacterium tuberculosis; E=6e-14 gb:AAC45221.1; (U87307) extracytoplasmic function alternative; E=2e-13 gb:AAC45219.1; (U87308) extracytoplasmic function alternative; E=5e-13 COG: Rv1221; COG1595 DNA-directed RNA polymerase specialized sigma; E=6e-15 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=2.1e-09; RNA polymerase sigma factor sigW 926593..927168 Rhodopirellula baltica SH 1 1794434 NP_864591.1 CDS RB1792 NC_005027.1 927261 927827 D hypothetical protein 927261..927827 Rhodopirellula baltica SH 1 1790416 NP_864592.1 CDS RB1793 NC_005027.1 927849 930413 D PMID: 10360571 best DB hits: BLAST: pir:F72424; hypothetical protein - Thermotoga maritima (strain MSB8); E=0.098; hypothetical protein 927849..930413 Rhodopirellula baltica SH 1 1790670 NP_864593.1 CDS RB1796 NC_005027.1 930376 930534 D hypothetical protein 930376..930534 Rhodopirellula baltica SH 1 1791348 NP_864594.1 CDS moxR NC_005027.1 930673 931767 D PMID: 9403685 best DB hits: BLAST: pir:H70121; methanol dehydrogenase regulator (moxR) homolog - Lyme; E=4e-64 pir:D75008; methanol dehydrogenase regulatory protein (moxr-2); E=5e-63 pir:C83106; conserved hypothetical protein PA4322 [imported] -; E=3e-62 COG: BB0176; COG0714 MoxR-like ATPases; E=4e-65 PFAM: PF00004; ATPase associated with va; E=0.0036 PF01078; Magnesium chelatase, subunit Chl; E=1.6e-08; methanol dehydrogenase regulator (moxR)-like protein 930673..931767 Rhodopirellula baltica SH 1 1792927 NP_864595.1 CDS RB1800 NC_005027.1 931757 932638 D PMID: 9634230 best DB hits: BLAST: pir:G82493; conserved hypothetical protein VCA0174 [imported] -; E=3e-14 swissprot:P71761; YE80_MYCTU HYPOTHETICAL 34.3 KDA PROTEIN RV1480; E=8e-12 pir:G70121; conserved hypothetical protein BB0175 - Lyme disease; E=7e-11 COG: VCA0174; COG1721 Uncharacterized ACR; E=3e-15 PFAM: PF01882; Protein of unknown function DUF58; E=1.4e-24; hypothetical protein 931757..932638 Rhodopirellula baltica SH 1 1795512 NP_864596.1 CDS RB1802 NC_005027.1 932817 935360 D hypothetical protein 932817..935360 Rhodopirellula baltica SH 1 1794905 NP_864597.1 CDS RB1805 NC_005027.1 935357 938212 D best DB hits: PFAM: PF00092; von Willebrand factor type A domain; E=0.85; hypothetical protein 935357..938212 Rhodopirellula baltica SH 1 1794014 NP_864598.1 CDS RB1809 NC_005027.1 938209 938361 R PMID: 8376963 best DB hits: BLAST: ddbj:BAA61806.1; (AB010300) replicase [garlic virus A]; E=0.77; replicase complement(938209..938361) Rhodopirellula baltica SH 1 1794587 NP_864599.1 CDS RB1814 NC_005027.1 938487 939221 R hypothetical protein complement(938487..939221) Rhodopirellula baltica SH 1 1797066 NP_864600.1 CDS galE NC_005027.1 939064 940068 D PMID: 9679194 best DB hits: BLAST: pir:D75143; udp-glucose 4-epimerase (gale-1) PAB2145 - Pyrococcus; E=8e-42 pir:A71183; probable UDP-glucose 4-epimerase - Pyrococcus horikoshii; E=3e-40 pir:T51252; dTDPglucose 4,6-dehydratase (EC 4.2.1.46) [imported] -; E=4e-37 COG: PAB2145; COG0451 Nucleoside-diphosphate-sugar epimerases; E=8e-43 BH3364; COG1088 dTDP-D-glucose 4,6-dehydratase; E=2e-26 TM0630; COG0451 Nucleoside-diphosphate-sugar epimerases; E=5e-26 PFAM: PF00056; lactate/malate dehydrogenase, NAD b; E=0.011 PF01370; NAD dependent epimerase/dehydratase; E=7.1e-43; udp-glucose 4-epimerase 939064..940068 Rhodopirellula baltica SH 1 1793467 NP_864601.1 CDS pknB NC_005027.1 940065 942473 D PMID: 8969512 best DB hits: BLAST: embl:CAA18685.1; (AL022602) serinethreonine protein; E=3e-23 pir:B70936; probable serinethreonine-specific protein kinase (EC; E=2e-22 swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=6e-22 COG: Rv2176; COG0515 Serine/threonine protein kinases; E=2e-23 PFAM: PF00069; Protein kinase domain; E=9.4e-41; serine/threonine-protein kinase 940065..942473 Rhodopirellula baltica SH 1 1797110 NP_864602.1 CDS RB1825 NC_005027.1 942503 942652 R hypothetical protein complement(942503..942652) Rhodopirellula baltica SH 1 1792036 NP_864603.1 CDS RB1827 NC_005027.1 942742 943644 D hypothetical protein 942742..943644 Rhodopirellula baltica SH 1 1796720 NP_864604.1 CDS RB1828 NC_005027.1 943676 945511 D signal peptide 943676..945511 Rhodopirellula baltica SH 1 1793207 NP_864605.1 CDS RB1830 NC_005027.1 945498 945611 R best DB hits: PFAM: PF01726; LexA DNA binding domain; E=0.85; hypothetical protein complement(945498..945611) Rhodopirellula baltica SH 1 1790027 NP_864606.1 CDS NqrA NC_005027.1 945722 947137 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A 945722..947137 Rhodopirellula baltica SH 1 1796057 NP_864607.1 CDS nqrB NC_005027.1 947143 948402 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B 947143..948402 Rhodopirellula baltica SH 1 1793058 NP_864608.1 CDS nqrC NC_005027.1 948389 949300 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C 948389..949300 Rhodopirellula baltica SH 1 1791694 NP_864609.1 CDS nqrD NC_005027.1 949304 949930 D Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit D 949304..949930 Rhodopirellula baltica SH 1 1792050 NP_864610.1 CDS nqrE NC_005027.1 949934 950575 D Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.; Na(+)-translocating NADH-quinone reductase subunit E 949934..950575 Rhodopirellula baltica SH 1 1793376 NP_864611.1 CDS nqrF NC_005027.1 950711 951970 D uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F 950711..951970 Rhodopirellula baltica SH 1 1795714 NP_864612.1 CDS RB1838 NC_005027.1 951986 952102 D hypothetical protein 951986..952102 Rhodopirellula baltica SH 1 1791825 NP_864613.1 CDS apbE NC_005027.1 952068 953690 D PMID: 7542800 best DB hits: BLAST: pir:A82094; thiamin biosynthesis lipoprotein ApbE VC2289 [imported]; E=3e-61 swissprot:P44550; APBE_HAEIN THIAMINE BIOSYNTHESIS LIPOPROTEIN; E=8e-52 gb:AAK03418.1; (AE006171) ApbE [Pasteurella multocida]; E=4e-51 COG: VC2289; COG1477 Membrane-associated lipoprotein involved in thiamine; E=3e-62 NMB0563; COG1477 Membrane-associated lipoprotein involved in; E=2e-46 apbE; COG1477 Membrane-associated lipoprotein involved in thiamine; E=8e-45 PFAM: PF02424; ApbE family; E=6.5e-89; thiamine biosynthesis lipoprotein apbE 952068..953690 Rhodopirellula baltica SH 1 1791547 NP_864614.1 CDS hetI NC_005027.1 953801 954643 R best DB hits: BLAST: gb:AAF19809.1; AF188287_1 (AF188287) MtaA [Stigmatella aurantiaca]; E=5e-17 pir:T00851; hypothetical protein T20F6.9 - Arabidopsis thaliana; E=2e-11 pir:E55210; hetI protein - Anabaena sp. (strain PCC 7120) -----; E=2e-11 COG: slr0495; COG2091 Phosphopantetheinyl transferase; E=3e-12 PFAM: PF01648; 4'-phosphopantetheinyl transferase s; E=7.5e-15; phosphopantetheinyltransferase complement(953801..954643) Rhodopirellula baltica SH 1 1795255 NP_864615.1 CDS RB1843 NC_005027.1 954715 955110 D hypothetical protein 954715..955110 Rhodopirellula baltica SH 1 1793995 NP_864616.1 CDS RB1845 NC_005027.1 955212 955595 D signal peptide 955212..955595 Rhodopirellula baltica SH 1 1789904 NP_864617.1 CDS RB1849 NC_005027.1 955620 956096 D hypothetical protein 955620..956096 Rhodopirellula baltica SH 1 1793814 NP_864618.1 CDS RB1854 NC_005027.1 956276 958387 R best DB hits: BLAST: pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=5e-22 embl:CAB94634.1; (AL359215) secreted glycosyl hydrolase.; E=1e-12 pir:T35029; hypothetical protein SC4C6.21c - Streptomyces coelicolor; E=8e-05; hypothetical protein complement(956276..958387) Rhodopirellula baltica SH 1 1794093 NP_864619.1 CDS RB1856 NC_005027.1 957840 959054 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 957840..959054 Rhodopirellula baltica SH 1 1793697 NP_864620.1 CDS RB1858 NC_005027.1 959080 959874 D PMID: 12093901 best DB hits: BLAST: pir:H82553; 3-demethylubiquinone-9 3-methyltransferase XF2471; E=0.027 pir:T30158; hypothetical protein C37A2.6 - Caenorhabditis elegans; E=0.030 embl:CAA89660.1; (Z49629) ORF YJR129c [Saccharomyces cerevisiae]; E=0.76 COG: XF2471; COG2227; E=0.003; hypothetical protein 959080..959874 Rhodopirellula baltica SH 1 1795207 NP_864621.1 CDS RB1859 NC_005027.1 959932 960306 D hypothetical protein 959932..960306 Rhodopirellula baltica SH 1 1793820 NP_864622.1 CDS RB1860 NC_005027.1 960361 960693 D signal peptide 960361..960693 Rhodopirellula baltica SH 1 1794258 NP_864623.1 CDS gntR NC_005027.1 960630 961037 D PMID: 9384377 best DB hits: BLAST: pir:G69999; transcriptional regulator GntR related protein ytrA -; E=8e-17 pir:D72336; transcriptional regulator, GntR family - Thermotoga; E=2e-14 pir:T36493; probable gntR-family transcriptional regulator -; E=9e-11 COG: BS_ytrA; COG1725 Predicted transcriptional regulators; E=8e-18 BS_yvoA; COG2188 Transcriptional regulators; E=8e-08 BH1164; COG1725 Predicted transcriptional regulators; E=8e-08 PFAM: PF00325; Bacterial regulatory proteins, crp f; E=0.49 PF00392; Bacterial regulatory proteins, gntR; E=9.4e-16; GntR family transcriptional regulator 960630..961037 Rhodopirellula baltica SH 1 1793961 NP_864624.1 CDS RB1866 NC_005027.1 961124 962131 D PMID: 10382966 best DB hits: BLAST: pir:F72742; probable transport ATP-binding protein APE0471 -; E=3e-34 pir:C72303; ABC transporter ATP-binding protein - Thermotoga; E=3e-34 gb:AAF81232.1; (AF263012) ABC transporter ATP binding protein; E=5e-34 COG: APE0471; COG1131 ABC-type multidrug transport system, ATPase; E=2e-35 PFAM: PF00448; SRP54-type protein, GTPase domain; E=0.16 PF00005; ABC transporter; E=1.4e-42; transport ATP-binding protein 961124..962131 Rhodopirellula baltica SH 1 1793923 NP_864625.1 CDS RB1868 NC_005027.1 962128 964635 D signal peptide 962128..964635 Rhodopirellula baltica SH 1 1793266 NP_864626.1 CDS RB1870 NC_005027.1 964632 966032 D hypothetical protein 964632..966032 Rhodopirellula baltica SH 1 1790782 NP_864627.1 CDS RB1872 NC_005027.1 966053 966169 D hypothetical protein 966053..966169 Rhodopirellula baltica SH 1 1795125 NP_864628.1 CDS RB1874 NC_005027.1 966194 967177 R PMID: 10360571 best DB hits: BLAST: pir:F72425; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine; E=7e-12 ddbj:BAB03814.1; (AP001507); E=2e-09 swissprot:P29251; FAS_PNECA FOLIC ACID SYNTHESIS PROTEIN; E=3e-08 COG: TM0041; COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; E=7e-13 YNL256w_2; COG0801; E=9e-05 NMB0745; COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; E=1e-04 PFAM: PF01288; 7,8-dihydro-6-hydroxymethylpterin-py; E=2.4e-24; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(966194..967177) Rhodopirellula baltica SH 1 1794078 NP_864629.1 CDS RB1877 NC_005027.1 967185 967322 R hypothetical protein complement(967185..967322) Rhodopirellula baltica SH 1 1797024 NP_864630.1 CDS RB1878 NC_005027.1 967292 967732 R hypothetical protein complement(967292..967732) Rhodopirellula baltica SH 1 1794785 NP_864631.1 CDS RB1879 NC_005027.1 967725 967964 D hypothetical protein 967725..967964 Rhodopirellula baltica SH 1 1791845 NP_864632.1 CDS RB1880 NC_005027.1 967988 968215 R signal peptide complement(967988..968215) Rhodopirellula baltica SH 1 1794298 NP_864633.1 CDS gspA NC_005027.1 968293 970143 R PMID: 10952301 best DB hits: BLAST: pir:C82076; general secretion pathway protein A VC2445 [imported] -; E=8e-18 pir:H82326; MSHA biogenesis protein MshM VC0403 [imported] - Vibrio; E=2e-16 swissprot:P45754; GSPA_AERHY GENERAL SECRETION PATHWAY PROTEIN A; E=2e-14 COG: VC2445_1; COG3267 General secretion pathway protein A; E=7e-19 PFAM: PF00719; Inorganic pyrophosphatase; E=0.73 PF00004; ATPase associated with; E=0.011; general secretion pathway protein A complement(968293..970143) Rhodopirellula baltica SH 1 1791798 NP_864634.1 CDS RB1885 NC_005027.1 970284 971165 D best DB hits: BLAST: pir:A71001; hypothetical protein PH1305 - Pyrococcus horikoshii; E=4e-13 pir:G75136; menaquinone biosynthesis methlytransferase related; E=9e-12 ddbj:BAB07674.1; (AP001520) BH3955~unknown conserved protein; E=2e-05 COG: PH1305; COG0500 SAM-dependent methyltransferases; E=4e-14; menaquinone biosynthesis methlytransferase related protein 970284..971165 Rhodopirellula baltica SH 1 1792133 NP_864635.1 CDS RB1887 NC_005027.1 971181 972647 D best DB hits: BLAST: pir:S27612; ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.-) -; E=2e-87 pir:S27619; ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.-) -; E=3e-86 pdb:1EYY; A Chain A, Crystal Structure Of The Nadp+ Dependent; E=8e-79 COG: PA2217; COG1012 NAD-dependent aldehyde dehydrogenases; E=9e-80 PFAM: PF00831; Ribosomal L29 protein; E=0.78 PF00171; Aldehyde dehydrogenase; E=2.9e-07; aldehyde dehydrogenase 971181..972647 Rhodopirellula baltica SH 1 1791649 NP_864636.1 CDS RB1889 NC_005027.1 972883 976134 D PMID: 8969512 best DB hits: BLAST: swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=3e-40 swissprot:Q11053; PKNH_MYCTU PROBABLE SERINETHREONINE-PROTEIN; E=2e-38 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=2e-38 COG: Rv1266c; COG0515 Serine/threonine protein kinases; E=1e-39 PFAM: PF00069; Protein kinase domain; E=1.1e-41 PF00400; WD domain, G-beta repeat; E=0.0026; serine/threonine-protein kinase 972883..976134 Rhodopirellula baltica SH 1 1791418 NP_864637.1 CDS RB1890 NC_005027.1 976187 976312 R hypothetical protein complement(976187..976312) Rhodopirellula baltica SH 1 1795980 NP_864638.1 CDS RB1892 NC_005027.1 976341 979562 D PMID: 10484179 best DB hits: BLAST: ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=2e-37 embl:CAB94054.1; (AL358672) serinethreonine-protein; E=2e-34 pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=2e-33 COG: BH2504_1; COG0515 Serine/threonine protein kinases; E=2e-38 PFAM: PF00069; Protein kinase domain; E=5.1e-46 PF00400; WD domain, G-beta repeat; E=0.023; serine/threonine protein kinase 976341..979562 Rhodopirellula baltica SH 1 1791786 NP_864639.1 CDS RB1893 NC_005027.1 979639 982911 D PMID: 9384377 best DB hits: BLAST: pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=9e-29 ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=1e-28 swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=6e-28 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=8e-30 PFAM: PF00069; Protein kinase domain; E=8.4e-42 PF00400; WD domain, G-beta repeat; E=0.3; serine/threonine-protein kinase 979639..982911 Rhodopirellula baltica SH 1 1796876 NP_864640.1 CDS RB1895 NC_005027.1 983055 985346 R PMID: 7665561 best DB hits: BLAST: swissprot:Q60560; SMB2_MESAU DNA-BINDING PROTEIN SMUBP-2; E=1e-100 gb:AAG28561.1; AF199411_1 (AF199411) antifreeze-enhancer binding; E=1e-99 gb:AAA70430.1; (L24544) DNA helicase [Homo sapiens]; E=1e-98 COG: aq_2057; COG1112 Superfamily I DNA and RNA helicases and helicase; E=1e-83 PFAM: PF00910; RNA helicase; E=0.63 PF00580; UvrD/REP helicase; E=0.54 PF00004; ATPase associated with; E=0.0017; DNA-binding protein SMUBP-2 complement(983055..985346) Rhodopirellula baltica SH 1 1797031 NP_864641.1 CDS RB1896 NC_005027.1 985295 985615 D PMID: 10984043 best DB hits: BLAST: pir:G83401; hypothetical protein PA1960 [imported] - Pseudomonas; E=9e-05 pir:B81972; probable integral membrane protein NMA0537 [imported]; E=0.014 pir:D81029; conserved hypothetical protein NMB1917 [imported] -; E=0.018 COG: PA1960_2; COG3326 Predicted membrane protein; E=4e-05; hypothetical protein 985295..985615 Rhodopirellula baltica SH 1 1793148 NP_864642.1 CDS RB1897 NC_005027.1 985743 986441 R hypothetical protein complement(985743..986441) Rhodopirellula baltica SH 1 1794508 NP_864643.1 CDS aroB NC_005027.1 986429 987715 D PMID: 9405209 best DB hits: BLAST: swissprot:P77980; AROB_SALTY 3-DEHYDROQUINATE SYNTHASE -----; E=4e-66 pir:B82053; 3-dehydroquinate synthase VC2628 [imported] - Vibrio; E=5e-65 ddbj:BAB10417.1; (AB011474) 3-dehydroquinate synthase-like; E=6e-63 COG: VC2628; COG0337 3-dehydroquinate synthetase; E=5e-66 PFAM: PF01761; 3-dehydroquinate synthase; E=4e-146; 3-dehydroquinate synthase 986429..987715 Rhodopirellula baltica SH 1 1794955 NP_864644.1 CDS RB1900 NC_005027.1 987820 988374 D PMID: 9919671 best DB hits: BLAST: embl:CAA09920.1; (AJ012097) NusG-like protein [Myxococcus; E=3e-05 pir:G82255; probable transcription activator RfaH VC0990 [imported]; E=4e-04 embl:CAA10615.1; (AJ132239) transcriptional activator [Erwinia; E=0.019 COG: VC0990; COG0250 Transcription antiterminator; E=3e-05; NusG-like protein- transcription activator 987820..988374 Rhodopirellula baltica SH 1 1795853 NP_864645.1 CDS RB1901 NC_005027.1 988429 988833 D hypothetical protein 988429..988833 Rhodopirellula baltica SH 1 1791031 NP_864646.1 CDS nirB NC_005027.1 988719 990776 D PMID: 2543955 best DB hits: BLAST: pir:S04349; nitrate reductase (NADH) (EC 1.6.6.1) - Escherichia coli; E=5e-75 swissprot:P08201; NIRB_ECOLI NITRITE REDUCTASE [NAD(P)H] LARGE; E=3e-69 gb:AAG58473.1; AE005559_9 (AE005559) nitrite reductase (NAD(P)H); E=3e-69 COG: nirB; COG1251 NAD(P)H-nitrite reductase; E=3e-70 PH1509; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; E=3e-38 PFAM: PF00070; Pyridine nucleotide-disulphide oxid; E=1.5e-65; nitrite reductase [NAD(P)H] large subunit 988719..990776 Rhodopirellula baltica SH 1 1793860 NP_864647.1 CDS RB1903 NC_005027.1 990721 992163 D PMID: 11248100 best DB hits: BLAST: gb:AAK02107.1; (AE006035) NrfA [Pasteurella multocida]; E=0.068 PFAM: PF02335; Cytochrome c552; E=0.21; NrfA- nitrite reduction protein 990721..992163 Rhodopirellula baltica SH 1 1794129 NP_864648.1 CDS RB1908 NC_005027.1 992277 992900 D signal peptide 992277..992900 Rhodopirellula baltica SH 1 1793523 NP_864649.1 CDS RB1909 NC_005027.1 992934 993434 D PMID: 3067078 best DB hits: BLAST: embl:CAC11135.1; (AJ245945) neuroglobin [Mus musculus]; E=1e-09 gb:AAG59898.1; (AF334379) neuroglobin [Rattus norvegicus]; E=1e-09 ddbj:BAA83959.1; (AB024563) HMP [Bacillus halodurans] -----; E=1e-08 COG: BH1058_1; COG1017 Hemoglobin-like flavoprotein; E=1e-09 PFAM: PF00042; Globin; E=3.9e-20; hemoglobin 992934..993434 Rhodopirellula baltica SH 1 1795374 NP_864650.1 CDS RB1910 NC_005027.1 993393 993764 R hypothetical protein complement(993393..993764) Rhodopirellula baltica SH 1 1792221 NP_864651.1 CDS RB1912 NC_005027.1 993780 995861 R signal peptide complement(993780..995861) Rhodopirellula baltica SH 1 1795890 NP_864652.1 CDS RB1917 NC_005027.1 995938 998040 R PMID: 8905231 best DB hits: BLAST: swissprot:Q00808; HET1_PODAN VEGETATIBLE INCOMPATIBILITY PROTEIN; E=8e-17 swissprot:P49695; PKWA_THECU SERINETHREONINE-PROTEIN; E=9e-14 swissprot:P78706; RCO1_NEUCR TRANSCRIPTIONAL REPRESSOR RCO-1; E=6e-13 COG: sll1491; COG2319 WD40 repeat protein; E=9e-13 PFAM: PF00400; WD domain, G-beta repeat; E=0.0052; hypothetical protein complement(995938..998040) Rhodopirellula baltica SH 1 1795477 NP_864653.1 CDS RB1920 NC_005027.1 998226 998522 R hypothetical protein complement(998226..998522) Rhodopirellula baltica SH 1 1795451 NP_864654.1 CDS RB1922 NC_005027.1 998609 998917 R hypothetical protein complement(998609..998917) Rhodopirellula baltica SH 1 1794673 NP_864655.1 CDS RB1923 NC_005027.1 998904 999107 D hypothetical protein 998904..999107 Rhodopirellula baltica SH 1 1796123 NP_864656.1 CDS RB1924 NC_005027.1 999064 1012956 D PMID: 99098700 best DB hits: BLAST: pir:T28679; fibrinogen-binding protein homolog - Staphylococcus aureus; E=6e-11 gb:AAF72509.1; AF245041_1 (AF245041) cell-surface adhesin; E=2e-09 gb:AAF76874.1; (AF246145) unknown [uncultured soil microbe; E=5e-07 COG: sll0656_1; COG3204 Uncharacterized BCR; E=9e-05 PFAM: PF00028; Cadherin domain; E=0.88 PF00404; Dockerin type I repeat; E=0.32; fibrinogen-binding protein 999064..1012956 Rhodopirellula baltica SH 1 1790213 NP_864657.1 CDS RB1930 NC_005027.1 1012991 1013539 D signal peptide 1012991..1013539 Rhodopirellula baltica SH 1 1797036 NP_864658.1 CDS RB1931 NC_005027.1 1013625 1013831 R hypothetical protein complement(1013625..1013831) Rhodopirellula baltica SH 1 1794447 NP_864659.1 CDS RB1932 NC_005027.1 1013853 1014026 D hypothetical protein 1013853..1014026 Rhodopirellula baltica SH 1 1796847 NP_864660.1 CDS RB1934 NC_005027.1 1014051 1019531 D PMID: 1712356 best DB hits: BLAST: pir:A47026; alkaline phosphatase, 145K - Synechococcus sp. (strain PCC; E=0.0 pir:S74916; alkaline phosphatase - Synechocystis sp. (strain PCC 6803); E=1e-108 pir:A69809; probable multifunctional phosphoesterase (EC 3.1.-.-) yfkN; E=5e-22 COG: sll0654_2; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase; E=8e-99 DRA0018; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and; E=1e-22 BS_yfkN_2; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase; E=4e-22 PFAM: PF01009; 5'-nucleotidase, catalytic do; E=1e-32 PF02872; 5'-nucleotidase, C-terminal d; E=3.9e-38 PF00404; Dockerin type I repeat; E=0.0061; alkaline phosphatase 1014051..1019531 Rhodopirellula baltica SH 1 1792793 NP_864661.1 CDS RB1935 NC_005027.1 1019601 1019741 D hypothetical protein 1019601..1019741 Rhodopirellula baltica SH 1 1791025 NP_864662.1 CDS RB1936 NC_005027.1 1019641 1022700 D PMID: 7632918 best DB hits: BLAST: swissprot:P80028; THIH_CHLRE THIOREDOXIN H-TYPE (TRX-H); E=0.078 pdb:1TOF; Thioredoxin H (Oxidized Form), Nmr, 23 Structures; E=0.078 gb:AAF19044.1; (L08896) thioredoxin [Mycoplasma gallisepticum]; E=0.22 PFAM: PF01835; Alpha-2-macroglobulin family N-termi; E=0.4 PF00085; Thioredoxin; E=0.18; thioredoxin 1019641..1022700 Rhodopirellula baltica SH 1 1796326 NP_864663.1 CDS RB1937 NC_005027.1 1022707 1022820 D hypothetical protein 1022707..1022820 Rhodopirellula baltica SH 1 1794980 NP_864664.1 CDS RB1939 NC_005027.1 1022855 1024363 R PMID: 9353932 best DB hits: BLAST: ddbj:BAB05939.1; (AP001514) dehydrogenase [Bacillus halodurans]; E=2e-07 swissprot:P40332; YISS_BACSU HYPOTHETICAL 37.5 KD PROTEIN IN; E=6e-06 pir:B72359; lipopolysaccharide biosynthesis protein BplA -; E=1e-05 COG: BH2220; COG0673 Predicted dehydrogenases and related proteins; E=2e-08 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=5e-14; oxidoreductase complement(1022855..1024363) Rhodopirellula baltica SH 1 1796622 NP_864665.1 CDS RB1942 NC_005027.1 1024508 1025485 D signal peptide 1024508..1025485 Rhodopirellula baltica SH 1 1789947 NP_864666.1 CDS RB1946 NC_005027.1 1025731 1026966 R signal peptide complement(1025731..1026966) Rhodopirellula baltica SH 1 1795108 NP_864667.1 CDS RB1950 NC_005027.1 1026986 1028932 R signal peptide complement(1026986..1028932) Rhodopirellula baltica SH 1 1794331 NP_864668.1 CDS RB1954 NC_005027.1 1028985 1031483 R best DB hits: BLAST: pir:T30283; polyketide synthase - Streptomyces sp. (strain MA6548); E=0.11 gb:AAF86396.1; AF235504_17 (AF235504) FkbA [Streptomyces; E=0.11 pir:T30228; polyketide synthase - Streptomyces hygroscopicus -----; E=0.12; polyketide synthase complement(1028985..1031483) Rhodopirellula baltica SH 1 1791147 NP_864669.1 CDS RB1958 NC_005027.1 1031656 1033554 R PMID: 8843436 best DB hits: BLAST: embl:CAB59500.1; (AL132648) hypothetical protein SCI41.30c; E=5e-16 pir:C70512; hypothetical protein Rv2112c - Mycobacterium; E=1e-13 gb:AAC45734.1; (U26422) ORF6(2); similar to ORF6(1) of; E=3e-13; hypothetical protein complement(1031656..1033554) Rhodopirellula baltica SH 1 1794649 NP_864670.1 CDS RB1961 NC_005027.1 1033791 1034144 D hypothetical protein 1033791..1034144 Rhodopirellula baltica SH 1 1795587 NP_864671.1 CDS rpoA NC_005027.1 1034475 1035977 D PMID: 9835038 best DB hits: BLAST: swissprot:O50634; RPOA_BACHD DNA-DIRECTED RNA POLYMERASE ALPHA; E=2e-09 swissprot:Q9Z3E7; RPOA_XANCP DNA-DIRECTED RNA POLYMERASE ALPHA; E=4e-09 gb:AAD00325.2; (U79735) RNA polymerase ALPHA subunit [Xanthomonas; E=4e-09 COG: BH0162; COG0202 DNA-directed RNA polymerase alpha subunit/40 kD; E=2e-10 PFAM: PF00515; TPR Domain; E=0.87 PF01000; Bacterial RNA polymerase, alpha; E=6.5e-12; DNA-directed RNA polymerase alpha chain 1034475..1035977 Rhodopirellula baltica SH 1 1797000 NP_864672.1 CDS tgt NC_005027.1 1035983 1037101 D PMID: 7665516 best DB hits: BLAST: pir:T46898; queuine tRNA-ribosyltransferase (EC 2.4.2.29); E=2e-98 gb:AAA27705.1; (L33777) tRNA guanine transglycosylase [Zymomonas; E=2e-98 swissprot:P28720; TGT_ZYMMO QUEUINE TRNA-RIBOSYLTRANSFERASE; E=2e-98 COG: PA3823; COG0343 Queuine/archaeosine tRNA-ribosyltransferase; E=6e-99 PFAM: PF01702; Queuine tRNA-ribosyltransferase; E=1.2e-118; queuine tRNA-ribosyltransferase 1035983..1037101 Rhodopirellula baltica SH 1 1791072 NP_864673.1 CDS RB1972 NC_005027.1 1037222 1038496 R PMID: 9384377 best DB hits: BLAST: pir:A70029; hypothetical protein yvaX - Bacillus subtilis -----; E=4e-04 swissprot:Q90805; CNG1_CHICK CYCLIC NUCLEOTIDE GATED CHANNEL, CONE; E=0.52; hypothetical protein complement(1037222..1038496) Rhodopirellula baltica SH 1 1794101 NP_864674.1 CDS RB1974 NC_005027.1 1038493 1039470 R hypothetical protein complement(1038493..1039470) Rhodopirellula baltica SH 1 1795941 NP_864675.1 CDS RB1977 NC_005027.1 1039488 1040645 D PMID: 9679194 best DB hits: BLAST: gb:AAF55578.1; (AE003723) CG7698 gene product [Drosophila; E=3e-09 pir:E71119; hypothetical protein PH0724 - Pyrococcus horikoshii; E=1e-05 gb:AAF19420.1; AF203969_1 (AF203969) cleavage and polyadenylation; E=3e-05 COG: PH0724; COG1236 Predicted exonuclease of the beta-lactamase fold; E=1e-06 PH1404; COG1782 Predicted metal-dependent RNase, consists of a; E=0.001 VC0264; COG1236 Predicted exonuclease of the beta-lactamase fold; E=0.002 PFAM: PF00753; Metallo-beta-lactamase superfamil; E=0.23; cleavage and polyadenylation specifity factor protein 1039488..1040645 Rhodopirellula baltica SH 1 1795523 NP_864676.1 CDS RB1979 NC_005027.1 1040854 1043910 D best DB hits: PFAM: PF00242; DNA polymerase (viral) N-term; E=0.23; signal peptide 1040854..1043910 Rhodopirellula baltica SH 1 1791333 NP_864677.1 CDS RB1984 NC_005027.1 1043987 1044448 R hypothetical protein complement(1043987..1044448) Rhodopirellula baltica SH 1 1795737 NP_864678.1 CDS gdhP NC_005027.1 1044541 1048065 D PMID: 2671663 best DB hits: BLAST: swissprot:P13650; DHGB_ACICA GLUCOSE DEHYDROGENASE-B; E=0.12 pdb:1CRU; B Chain B, Soluble Quinoprotein Glucose Dehydrogenase; E=0.12 pir:C69050; phycocyanin alpha phycocyanobilin lyase CpcE -; E=0.19; glucose dehydrogenase-B [pyrroloquinoline-quinone] [precursor] 1044541..1048065 Rhodopirellula baltica SH 1 1795306 NP_864679.1 CDS RB1991 NC_005027.1 1048157 1048672 D signal peptide 1048157..1048672 Rhodopirellula baltica SH 1 1795828 NP_864680.1 CDS RB1992 NC_005027.1 1048704 1049129 D PMID: 7610040 best DB hits: BLAST: swissprot:P16681; PHNB_ECOLI PHNB PROTEIN ----- pir: C35718; E=7e-13 gb:AAG59306.1; AE005643_13 (AE005643) phnB gene product; E=8e-13 pir:B83475; hypothetical protein PA1353 [imported] - Pseudomonas; E=4e-12 COG: phnB; COG2764 Uncharacterized BCR; E=7e-14; PhnB protein 1048704..1049129 Rhodopirellula baltica SH 1 1796514 NP_864681.1 CDS papS NC_005027.1 1049204 1050487 R PMID: 10192388 best DB hits: BLAST: pir:E72028; poly A polymerase - Chlamydophila pneumoniae (strains; E=9e-41 pir:B81744; poly(A) polymerase TC0077 [imported] -; E=3e-40 pir:A71481; probable poly A polymerase - Chlamydia trachomatis; E=5e-40 COG: CPn0845; COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; E=9e-42 PFAM: PF01743; Poly A polymerase; E=2.6e-50; poly A polymerase complement(1049204..1050487) Rhodopirellula baltica SH 1 1790791 NP_864682.1 CDS RB1994 NC_005027.1 1050487 1051065 D hypothetical protein 1050487..1051065 Rhodopirellula baltica SH 1 1792429 NP_864683.1 CDS RB1995 NC_005027.1 1050518 1051123 R hypothetical protein complement(1050518..1051123) Rhodopirellula baltica SH 1 1796153 NP_864684.1 CDS ppdK NC_005027.1 1051251 1053923 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 1051251..1053923 Rhodopirellula baltica SH 1 1792179 NP_864685.1 CDS RB1999 NC_005027.1 1053955 1054068 D hypothetical protein 1053955..1054068 Rhodopirellula baltica SH 1 1792235 NP_864686.1 CDS RB2000 NC_005027.1 1054072 1054248 D hypothetical protein 1054072..1054248 Rhodopirellula baltica SH 1 1793881 NP_864687.1 CDS RB2001 NC_005027.1 1054294 1055706 D PMID: 11371519 best DB hits: BLAST: pir:G69146; capsular polysaccharide biosynthesis protein -; E=2e-10 pir:E72354; probable hexosyltransferase (EC 2.4.1.-) TM0622 -; E=9e-10 pir:T44601; probable glycosyltransferase [imported] - Rhizobium; E=5e-08 COG: MTH362; COG0438 Predicted glycosyltransferases; E=2e-11 PFAM: PF00534; Glycosyl transferases group 1; E=1.3e-18; glycosyltransferase 1054294..1055706 Rhodopirellula baltica SH 1 1794503 NP_864688.1 CDS RB2002 NC_005027.1 1055737 1055970 D hypothetical protein 1055737..1055970 Rhodopirellula baltica SH 1 1793260 NP_864689.1 CDS RB2003 NC_005027.1 1056010 1056846 D signal peptide 1056010..1056846 Rhodopirellula baltica SH 1 1796180 NP_864690.1 CDS RB2006 NC_005027.1 1056824 1057030 D hypothetical protein 1056824..1057030 Rhodopirellula baltica SH 1 1789919 NP_864691.1 CDS RB2007 NC_005027.1 1056967 1057197 R hypothetical protein complement(1056967..1057197) Rhodopirellula baltica SH 1 1796001 NP_864692.1 CDS RB2008 NC_005027.1 1057302 1058660 R PMID: 9389475 best DB hits: BLAST: gb:AAB89763.1; (AE001000) signal-transducing histidine kinase; E=4e-29 embl:CAB62662.1; (AL133422) two-component sensor; E=9e-24 swissprot:Q9R6X3; PHYB_ANASP CYANOBACTERIAL PHYTOCHROME B -----; E=9e-22 COG: DR2419_2; COG0642 Sensory transduction histidine kinases; E=3e-21 PFAM: PF00785; PAC motif; E=7.7e-10 PF00512; His Kinase A (phosphoacceptor) doma; E=7.1e-09 PF02518; Histidine kinase-, DNA gyrase B-, p; E=3.1e-25; signal-transducing histidine kinase complement(1057302..1058660) Rhodopirellula baltica SH 1 1791809 NP_864693.1 CDS RB2010 NC_005027.1 1058648 1059391 D hypothetical protein 1058648..1059391 Rhodopirellula baltica SH 1 1790175 NP_864694.1 CDS RB2011 NC_005027.1 1059411 1059692 D hypothetical protein 1059411..1059692 Rhodopirellula baltica SH 1 1793790 NP_864695.1 CDS RB2012 NC_005027.1 1059627 1061186 R signal peptide complement(1059627..1061186) Rhodopirellula baltica SH 1 1794726 NP_864696.1 CDS secA NC_005027.1 1061404 1063605 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA 1061404..1063605 Rhodopirellula baltica SH 1 1790660 NP_864697.1 CDS RB2015 NC_005027.1 1063625 1063867 D hypothetical protein 1063625..1063867 Rhodopirellula baltica SH 1 1791402 NP_864698.1 CDS RB2016 NC_005027.1 1063806 1065398 D hypothetical protein 1063806..1065398 Rhodopirellula baltica SH 1 1794303 NP_864699.1 CDS RB2018 NC_005027.1 1065345 1065605 R hypothetical protein complement(1065345..1065605) Rhodopirellula baltica SH 1 1791792 NP_864700.1 CDS RB2019 NC_005027.1 1065619 1065798 D hypothetical protein 1065619..1065798 Rhodopirellula baltica SH 1 1791414 NP_864701.1 CDS RB2020 NC_005027.1 1065874 1065996 D hypothetical protein 1065874..1065996 Rhodopirellula baltica SH 1 1791967 NP_864702.1 CDS RB2021 NC_005027.1 1066001 1066123 D hypothetical protein 1066001..1066123 Rhodopirellula baltica SH 1 1795480 NP_864703.1 CDS RB2022 NC_005027.1 1066199 1066984 R PMID: 10484179 best DB hits: BLAST: ddbj:BAB06095.1; (AP001515) BH2376~unknown conserved protein; E=4e-48 pir:G69884; conserved hypothetical protein ymdB - Bacillus subtilis; E=3e-46 pir:D75415; conserved hypothetical protein - Deinococcus radiodurans; E=4e-38 COG: BH2376; COG1692 Uncharacterized BCR; E=4e-49 PFAM: PF02640; Uncharacterized BCR, YmdB family COG; E=1.9e-75; hypothetical protein complement(1066199..1066984) Rhodopirellula baltica SH 1 1797108 NP_864704.1 CDS rpsA NC_005027.1 1067110 1068792 R PMID: 9823893 best DB hits: BLAST: gb:AAD29257.1; AF107093_2 (AF107093) ribosomal protein S1; E=3e-48 gb:AAF64246.1; (AF045481) 30S ribosomal protein S1; E=2e-45 swissprot:Q9ZD28; RS1_RICPR 30S RIBOSOMAL PROTEIN S1 -----; E=3e-45 COG: RP521; COG0539 Ribosomal protein S1; E=3e-46 PFAM: PF00575; S1 RNA binding domain; E=3.6e-06; 30S ribosomal protein S1 complement(1067110..1068792) Rhodopirellula baltica SH 1 1791979 NP_864705.1 CDS RB2027 NC_005027.1 1068855 1069517 R signal peptide complement(1068855..1069517) Rhodopirellula baltica SH 1 1790494 NP_864706.1 CDS RB2031 NC_005027.1 1069601 1069822 D best DB hits: BLAST: gb:AAG13524.1; AC068924_29 (AC068924) non-LTR retroelement; E=0.55; hypothetical protein 1069601..1069822 Rhodopirellula baltica SH 1 1796209 NP_864707.1 CDS RB2032 NC_005027.1 1069776 1070867 R PMID: 10937442 best DB hits: BLAST: embl:CAA05166.1; (AJ002065) delta-9 desaturase [Spirulina; E=2e-38 gb:AAD00699.1; (U90417) delta 9 acyl-lipid fatty acid desaturase; E=3e-37 gb:AAB61353.1; (U36390) delta-9 desaturase [Synechococcus sp. PCC; E=3e-37 COG: sll0541; COG1398 Fatty-acid desaturase; E=4e-38 PFAM: PF01069; Fatty acid desaturase; E=4e-28; delta 9 acyl-lipid fatty acid desaturase complement(1069776..1070867) Rhodopirellula baltica SH 1 1791774 NP_864708.1 CDS RB2034 NC_005027.1 1071018 1071485 D hypothetical protein 1071018..1071485 Rhodopirellula baltica SH 1 1797058 NP_864709.1 CDS RB2038 NC_005027.1 1071604 1076265 R best DB hits: BLAST: pir:T26963; hypothetical protein ZK1151.2a - Caenorhabditis elegans; E=0.089 pir:T26964; hypothetical protein ZK1151.2b - Caenorhabditis elegans; E=0.089 ddbj:BAA96036.1; (AB040945) KIAA1512 protein [Homo sapiens]; E=0.50 PFAM: PF00817; impB/mucB/samB family; E=0.24; hypothetical protein complement(1071604..1076265) Rhodopirellula baltica SH 1 1795776 NP_864710.1 CDS RB2043 NC_005027.1 1076233 1076418 D hypothetical protein 1076233..1076418 Rhodopirellula baltica SH 1 1797106 NP_864711.1 CDS RB2044 NC_005027.1 1076379 1076585 D hypothetical protein 1076379..1076585 Rhodopirellula baltica SH 1 1797030 NP_864712.1 CDS RB2045 NC_005027.1 1076544 1077461 R PMID: 11259647 best DB hits: BLAST: embl:CAB51627.1; (AJ245398) hypothetical protein [Sinorhizobium; E=0.28 swissprot:P29908; YNQ2_PARDE HYPOTHETICAL 22.9 KD PROTEIN IN NQO2; E=0.30 gb:AAG02153.1; AF212041_9 (AF212041) NADH dehydogenase [Zymomonas; E=0.73; iron-sulfur cluster transporter complement(1076544..1077461) Rhodopirellula baltica SH 1 1792906 NP_864713.1 CDS RB2046 NC_005027.1 1077543 1078985 D hypothetical protein 1077543..1078985 Rhodopirellula baltica SH 1 1791087 NP_864714.1 CDS RB2050 NC_005027.1 1079040 1079180 D hypothetical protein 1079040..1079180 Rhodopirellula baltica SH 1 1796097 NP_864715.1 CDS RB2051 NC_005027.1 1079177 1080280 D PMID: 10952301 best DB hits: BLAST: pir:D82333; conserved hypothetical protein VC0370 [imported] -; E=0.18 gb:AAC62109.1; (AF092449) mucin-like protein [Heterodera; E=0.43; mucin-like protein 1079177..1080280 Rhodopirellula baltica SH 1 1794920 NP_864716.1 CDS RB2052 NC_005027.1 1080412 1080579 R hypothetical protein complement(1080412..1080579) Rhodopirellula baltica SH 1 1792065 NP_864717.1 CDS RB2053 NC_005027.1 1080562 1081023 D hypothetical protein 1080562..1081023 Rhodopirellula baltica SH 1 1797040 NP_864718.1 CDS RB2055 NC_005027.1 1080965 1082173 D PMID: 10952301 best DB hits: BLAST: pir:E82493; conserved hypothetical protein VCA0172 [imported] -; E=0.002 gb:AAD30858.1; AF116251_1 (AF116251) BatA [Bacteroides fragilis]; E=0.012 pir:T21759; hypothetical protein F35C5.9 - Caenorhabditis elegans; E=0.012 COG: VCA0172; COG3035 Uncharacterized BCR; E=2e-04 PFAM: PF00092; von Willebrand factor type A domain; E=0.00013; hypothetical protein 1080965..1082173 Rhodopirellula baltica SH 1 1794273 NP_864719.1 CDS RB2056 NC_005027.1 1082219 1082815 D hypothetical protein 1082219..1082815 Rhodopirellula baltica SH 1 1794596 NP_864720.1 CDS RB2059 NC_005027.1 1082949 1084172 R PMID: 10984043 best DB hits: BLAST: pir:E82979; hypothetical protein PA5343 [imported] - Pseudomonas; E=5e-21 gb:AAG18860.1; (AE004989) Vng0267h [Halobacterium sp. NRC-1]; E=4e-14 pir:G75470; conserved hypothetical protein - Deinococcus radiodurans; E=3e-06 COG: PA5343; COG0451 Nucleoside-diphosphate-sugar epimerases; E=5e-22 PFAM: PF00367; phosphotransferase system, EIIB; E=0.66; nucleoside-diphosphate-sugar epimerase complement(1082949..1084172) Rhodopirellula baltica SH 1 1794385 NP_864721.1 CDS degP NC_005027.1 1084162 1085478 D PMID: 9204764 PMID: 7845208 best DB hits: BLAST: pir:B81914; probable periplasmic serine proteinase (EC 3.4.21.-); E=1e-21 pir:S74643; proteinase hhoA (EC 3.4.-.-) - Synechocystis sp. (strain; E=1e-18 swissprot:Q52894; DEGP_RHIME PROBABLE SERINE PROTEASE DO-LIKE; E=3e-17 COG: NMB0532; COG0265 Trypsin-like serine proteases, typically; E=5e-22 CT823; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=2e-18 XF2241; COG0265 Trypsin-like serine proteases, typically; E=4e-18 PFAM: PF01215; Cytochrome c oxidase subunit Vb; E=0.4 PF00089; Trypsin; E=0.029 PF00595; PDZ domain (Also known as DHR or G; E=1.7e-06; serine protease DO-like 1084162..1085478 Rhodopirellula baltica SH 1 1792855 NP_864722.1 CDS RB2066 NC_005027.1 1085462 1086592 D PMID: 9204764 PMID: 7845208 best DB hits: BLAST: gb:AAK02818.1; (AE006110) HtrA [Pasteurella multocida]; E=2e-05 pir:A82581; periplasmic proteinase XF2241 [imported] - Xylella; E=2e-05 swissprot:P45129; HTOA_HAEIN PROBABLE PERIPLASMIC SERINE PROTEASE; E=3e-05 COG: XF2241; COG0265 Trypsin-like serine proteases, typically; E=2e-06 htrA; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=5e-06 VC0566; COG0265 Trypsin-like serine proteases, typically; E=4e-05 PFAM: PF00595; PDZ domain (Also known as DHR o; E=9.6e-09; serine protease 1085462..1086592 Rhodopirellula baltica SH 1 1790872 NP_864723.1 CDS RB2068 NC_005027.1 1086596 1088749 D hypothetical protein 1086596..1088749 Rhodopirellula baltica SH 1 1792427 NP_864724.1 CDS RB2071 NC_005027.1 1088758 1088967 D hypothetical protein 1088758..1088967 Rhodopirellula baltica SH 1 1794328 NP_864725.1 CDS RB2072 NC_005027.1 1089022 1089204 R hypothetical protein complement(1089022..1089204) Rhodopirellula baltica SH 1 1789953 NP_864726.1 CDS RB2075 NC_005027.1 1089234 1090151 D hypothetical protein 1089234..1090151 Rhodopirellula baltica SH 1 1792549 NP_864727.1 CDS RB2077 NC_005027.1 1090282 1090434 D hypothetical protein 1090282..1090434 Rhodopirellula baltica SH 1 1795789 NP_864728.1 CDS RB2078 NC_005027.1 1090387 1091322 R PMID: 10984043 best DB hits: BLAST: pir:G83487; hypothetical protein PA1268 [imported] - Pseudomonas; E=6e-68 gb:AAF97423.1; AF195522_1 (AF195522) B-cell mitogen precursor; E=2e-22 embl:CAB71312.1; (AJ130879) proline racemase [Clostridium; E=4e-18 COG: VNG0332C; COG0384 Predicted epimerase, PhzC/PhzF homolog; E=0.002; proline racemase complement(1090387..1091322) Rhodopirellula baltica SH 1 1791419 NP_864729.1 CDS RB2080 NC_005027.1 1091409 1091549 R hypothetical protein complement(1091409..1091549) Rhodopirellula baltica SH 1 1794189 NP_864730.1 CDS RB2081 NC_005027.1 1091484 1096037 D PMID: 7793970 best DB hits: BLAST: gb:AAG60941.1; AF322013_60 (AF322013) ID587 [Bradyrhizobium; E=1e-105 pir:S66261; X-Pro dipeptidyl-peptidase (EC 3.4.14.11) -; E=2e-23 ddbj:BAB10391.1; (AB006701) dipeptidyl peptidase IV-like protein; E=2e-23 COG: XF0015; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; E=2e-11 PFAM: PF00930; Dipeptidyl peptidase IV (DPP IV); E=3.8e-06 PF01738; Dienelactone hydrolase; E=0.0042; X-Pro dipeptidyl-peptidase 1091484..1096037 Rhodopirellula baltica SH 1 1794615 NP_864731.1 CDS pltG NC_005027.1 1096122 1096904 R PMID: 9512878 best DB hits: BLAST: pir:T17425; probable thioesterase (EC 3.1.2.-) pltG - Pseudomonas; E=1e-14 gb:AAC01736.1; (AF040570) thioesterase [Amycolatopsis; E=2e-14 gb:AAG52991.1; (AF040570) RifR [Amycolatopsis mediterranei]; E=2e-14 COG: PA2411; COG3208 Predicted thioesterase; E=5e-14 PFAM: PF00753; Metallo-beta-lactamase superfami; E=0.15 PF00975; Thioesterase domain; E=7.3e-32; thioesterase complement(1096122..1096904) Rhodopirellula baltica SH 1 1792026 NP_864732.1 CDS RB2084 NC_005027.1 1096948 1097097 R hypothetical protein complement(1096948..1097097) Rhodopirellula baltica SH 1 1791823 NP_864733.1 CDS betC NC_005027.1 1097128 1098594 D PMID: 94063929 best DB hits: BLAST: gb:AAA16877.1; (L13329) iduronate-2-sulfatase [Homo sapiens]; E=4e-62 gb:AAB33747.1; iduronate-2-sulfatase, IDS {EC 3.1.6.13} [human,; E=2e-61 gb:AAA37880.1; (L07921) iduronate sulfatase [Mus musculus]; E=2e-58 COG: PA2333; COG3119 Arylsulfatase A and related enzymes; E=2e-34 yejM; COG3083 Predicted hydrolase of alkaline phosphatase; E=6e-06 Rv3077; COG3119 Arylsulfatase A and related enzymes; E=3e-05 PFAM: PF00884; Sulfatase; E=1.4e-20; iduronate-2-sulfatase 1097128..1098594 Rhodopirellula baltica SH 1 1790828 NP_864734.1 CDS RB2086 NC_005027.1 1098564 1100600 D PMID: 10617197 best DB hits: BLAST: gb:AAC25927.2; (AC004681) O-GlcNAc transferase; E=1e-05 gb:AAB71463.1; (AC000098) Contains similarity to Rattus O-GlcNAc; E=3e-05 pir:T02544; hypothetical protein T26B15.1 - Arabidopsis thaliana; E=8e-05 COG: BH1262; COG0457 TPR-repeat-containing proteins; E=3e-04 PFAM: PF00515; TPR Domain; E=0.06; O-GlcNAc transferase 1098564..1100600 Rhodopirellula baltica SH 1 1796880 NP_864735.1 CDS RB2088 NC_005027.1 1100666 1101931 D hypothetical protein 1100666..1101931 Rhodopirellula baltica SH 1 1796037 NP_864736.1 CDS RB2090 NC_005027.1 1101973 1102308 D PMID: 8905231 best DB hits: BLAST: pir:S75103; hypothetical protein ssl0438 - Synechocystis sp.; E=0.028 COG: ssl0438; COG0222 Ribosomal protein L7/L12; E=0.003; hypothetical protein 1101973..1102308 Rhodopirellula baltica SH 1 1795531 NP_864737.1 CDS RB2091 NC_005027.1 1102525 1103328 R PMID: 10086841 best DB hits: BLAST: ddbj:BAB05636.1; (AP001513) chitooligosaccharide deacetylase; E=0.003 ddbj:BAB05021.1; (AP001511) BH1302~unknown conserved protein; E=0.004 pir:A70081; conserved hypothetical protein yxkH - Bacillus subtilis; E=0.004 COG: BH1917; COG0726 Predicted xylanase/chitin deacetylase; E=3e-04 PFAM: PF01522; Polysaccharide deacetylase; E=0.055; chitooligosaccharide deacetylase complement(1102525..1103328) Rhodopirellula baltica SH 1 1792308 NP_864738.1 CDS RB2092 NC_005027.1 1103340 1105265 R hypothetical protein complement(1103340..1105265) Rhodopirellula baltica SH 1 1797022 NP_864739.1 CDS RB2096 NC_005027.1 1105484 1106467 R hypothetical protein complement(1105484..1106467) Rhodopirellula baltica SH 1 1796416 NP_864740.1 CDS RB2097 NC_005027.1 1106473 1106658 D hypothetical protein 1106473..1106658 Rhodopirellula baltica SH 1 1792937 NP_864741.1 CDS ndaD NC_005027.1 1106613 1109489 R PMID: 8541651 best DB hits: BLAST: pir:B75202; d-aminoacylase (aspartate, glutamate etc) PAB0090 -; E=3e-78 swissprot:P72349; NDAD_ALCXX D-AMINOACYLASE (N-ACYL-D-AMINO-ACID; E=4e-53 swissprot:P94211; NDED_ALCXX N-ACYL-D-GLUTAMATE DEACYLASE; E=1e-51 COG: PAB0087; COG1680 Beta-lactamase class C and other penicillin binding; E=1e-25 PFAM: PF01979; Adenine deaminase; E=3.9e-08 PF00744; Dihydroorotase-like; E=0.13 PF00144; Beta-lactamase; E=0.022; D-aminoacylase complement(1106613..1109489) Rhodopirellula baltica SH 1 1794898 NP_864742.1 CDS RB2100 NC_005027.1 1109368 1109658 D hypothetical protein 1109368..1109658 Rhodopirellula baltica SH 1 1795521 NP_864743.1 CDS RB2101 NC_005027.1 1109640 1109816 R hypothetical protein complement(1109640..1109816) Rhodopirellula baltica SH 1 1794007 NP_864744.1 CDS RB2102 NC_005027.1 1109792 1110028 D hypothetical protein 1109792..1110028 Rhodopirellula baltica SH 1 1792343 NP_864745.1 CDS RB2103 NC_005027.1 1110119 1112464 D PMID: 9634230 best DB hits: BLAST: pir:T18551; saframycin Mx1 synthetase B - Myxococcus xanthus -----; E=1e-101 pir:H83343; probable non-ribosomal peptide synthetase PA2424; E=4e-96 gb:AAG02359.1; AF210249_18 (AF210249) peptide synthetase NRPS5-4-3; E=7e-93 COG: PA2424_1; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid; E=4e-97 Rv3826; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases; E=7e-82 VNG1339C; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid; E=9e-19 PFAM: PF00501; AMP-binding enzyme; E=1.7e-07 PF00550; Phosphopantetheine attachment sit; E=1.2e-12; acyl-CoA synthetase 1110119..1112464 Rhodopirellula baltica SH 1 1793096 NP_864746.1 CDS RB2105 NC_005027.1 1112600 1114012 R signal peptide complement(1112600..1114012) Rhodopirellula baltica SH 1 1792843 NP_864747.1 CDS RB2107 NC_005027.1 1113972 1114253 D hypothetical protein 1113972..1114253 Rhodopirellula baltica SH 1 1789898 NP_864748.1 CDS RB2110 NC_005027.1 1114250 1115653 D PMID: 8590279 best DB hits: BLAST: gb:AAG27731.1; AF312031_1 (AF312031) multi-drug efflux transporter; E=5e-14 swissprot:Q55364; Y896_SYNY3 HYPOTHETICAL 49.7 KDA PROTEIN SLR0896; E=1e-13 pir:E82527; multidrug efflux protein XF2686 [imported] - Xylella; E=3e-13 COG: slr0896; COG0534 Na+-driven multidrug efflux pump; E=1e-14 PFAM: PF01554; Uncharacterized membrane protein fam; E=1.6e-15; multidrug resistance protein norM 1114250..1115653 Rhodopirellula baltica SH 1 1790237 NP_864749.1 CDS citB NC_005027.1 1115740 1118445 D Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1115740..1118445 Rhodopirellula baltica SH 1 1790091 NP_864750.1 CDS speE NC_005027.1 1118463 1120007 D catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 1118463..1120007 Rhodopirellula baltica SH 1 1796729 NP_864751.1 CDS RB2116 NC_005027.1 1120043 1120354 D hypothetical protein 1120043..1120354 Rhodopirellula baltica SH 1 1791633 NP_864752.1 CDS RB2117 NC_005027.1 1120297 1120638 R PMID: 11859360 best DB hits: BLAST: pir:A30185; nuclear protein nuc2+ - fission yeast; E=0.38 pir:T11581; nuclear scaffold-like protein p76 - fission yeast; E=0.38 swissprot:P10505; NUC2_SCHPO NUCLEAR SCAFFOLD-LIKE PROTEIN P76; E=0.38 PFAM: PF00515; TPR Domain; E=2.1e-05; nuclear scaffold-like protein p76 complement(1120297..1120638) Rhodopirellula baltica SH 1 1791443 NP_864753.1 CDS gcpE NC_005027.1 1120813 1121961 R PMID: 1521767 best DB hits: BLAST: swissprot:P27433; GCPE_ECOLI GCPE PROTEIN (PROTEIN E) -----; E=6e-47 pir:F82283; gcpE protein VC0759 [imported] - Vibrio cholerae (group; E=1e-46 gb:AAK04094.1; (AE006237) GcpE [Pasteurella multocida]; E=2e-46 COG: gcpE; COG0821 Essential bacterial protein, involved in; E=6e-48; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase complement(1120813..1121961) Rhodopirellula baltica SH 1 1791065 NP_864754.1 CDS RB2120 NC_005027.1 1121915 1122079 D hypothetical protein 1121915..1122079 Rhodopirellula baltica SH 1 1790258 NP_864755.1 CDS RB2121 NC_005027.1 1122146 1123042 R PMID: 10567266 best DB hits: BLAST: pir:D75557; conserved hypothetical protein - Deinococcus radiodurans; E=8e-57 pir:S77243; hypothetical protein slr1363 - Synechocystis sp. (strain; E=1e-32 pir:F83213; conserved hypothetical protein PA3455 [imported] -; E=9e-28 COG: DR0132; COG2326 Uncharacterized BCR; E=8e-58; hypothetical protein complement(1122146..1123042) Rhodopirellula baltica SH 1 1794961 NP_864756.1 CDS RB2123 NC_005027.1 1123056 1123271 R hypothetical protein complement(1123056..1123271) Rhodopirellula baltica SH 1 1792952 NP_864757.1 CDS RB2125 NC_005027.1 1123268 1123954 R signal peptide complement(1123268..1123954) Rhodopirellula baltica SH 1 1792158 NP_864758.1 CDS RB2132 NC_005027.1 1124750 1128004 R signal peptide complement(1124750..1128004) Rhodopirellula baltica SH 1 1793569 NP_864759.1 CDS RB2135 NC_005027.1 1127997 1129463 R PMID: 11181566 best DB hits: BLAST: gb:AAG41945.1; AF304053_1 (AF304053) heparan N-sulfatase [Mus; E=4e-62 gb:AAF29467.1; (AF156255) N-sulfoglucosamine sulfohydrolase [Mus; E=6e-62 gb:AAG41946.1; AF304054_1 (AF304054) mutant heparan N-sulfatase; E=1e-61 COG: Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=7e-23 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=0.002 BS_yfnI; COG1368 Phosphoglycerol transferase and related proteins,; E=0.002 PFAM: PF00884; Sulfatase; E=7.8e-22; heparan N-sulfatase complement(1127997..1129463) Rhodopirellula baltica SH 1 1796988 NP_864760.1 CDS RB2136 NC_005027.1 1129426 1131408 D best DB hits: BLAST: gb:AAD26901.1; AC007267_1 (AC007267) leucine-rich repeat; E=0.011 gb:AAF82144.1; AC034256_8 (AC034256) Contains similarity to F-box; E=0.040 pir:T08903; hypothetical protein T32A16.10 - Arabidopsis thaliana; E=0.25; hypothetical protein 1129426..1131408 Rhodopirellula baltica SH 1 1792592 NP_864761.1 CDS RB2140 NC_005027.1 1131458 1131607 D hypothetical protein 1131458..1131607 Rhodopirellula baltica SH 1 1790115 NP_864762.1 CDS rluA NC_005027.1 1131677 1132375 R PMID: 1630901,7493321 best DB hits: BLAST: swissprot:P39219; RLUA_ECOLI RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE; E=5e-15 gb:AAG54362.1; AE005182_11 (AE005182) orf, hypothetical protein; E=3e-14 pir:C82498; ribosomal large chain pseudouridine synthase A VCA0104; E=5e-14 COG: rluA; COG0564 Pseudouridylate synthases, 23S RNA-specific; E=5e-16 PFAM: PF00849; RNA pseudouridylate synthase; E=4.8e-31; ribosomal large subunit pseudouridine synthase A complement(1131677..1132375) Rhodopirellula baltica SH 1 1791975 NP_864763.1 CDS RB2142 NC_005027.1 1132342 1133277 R PMID: 10993077 best DB hits: BLAST: pir:H82272; conserved hypothetical protein VC0853 [imported] -; E=3e-38 pir:D83259; conserved hypothetical protein PA3088 [imported] -; E=3e-36 gb:AAK02417.1; (AE006069) unknown [Pasteurella multocida]; E=5e-33 COG: VC0853; COG0061 Predicted kinase; E=2e-39 PFAM: PF01513; Domain of unknown function DUF15; E=6.2e-72; inorganic polyphosphate/ATP-NAD kinase complement(1132342..1133277) Rhodopirellula baltica SH 1 1796044 NP_864765.1 CDS dxs NC_005027.1 1133232 1135139 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(1133232..1135139) Rhodopirellula baltica SH 1 1791162 NP_864766.1 CDS ggpP NC_005027.1 1135136 1136089 R PMID: 8016276,10617198 best DB hits: BLAST: pir:S74538; geranylgeranyl pyrophosphate synthase - Synechocystis; E=3e-37 ddbj:BAA82613.1; (AB016093) geranylgeranyl diphosphate synthase; E=1e-36 embl:CAC10561.1; (AJ249453) gpp synthase large subunit [Mentha x; E=1e-35 COG: slr0739; COG0142 Geranylgeranyl pyrophosphate synthase; E=3e-38 PFAM: PF00348; Polyprenyl synthetase; E=1.6e-83; geranylgeranyl pyrophosphate synthetase [precursor] complement(1135136..1136089) Rhodopirellula baltica SH 1 1793946 NP_864767.1 CDS xseB NC_005027.1 1136086 1136505 R PMID: 10984043 best DB hits: BLAST: pir:C82778; exodeoxyribonuclease small subunit XF0660 [imported] -; E=1e-04 pir:E83139; exodeoxyribonuclease VII small subunit PA4042; E=0.001 gb:AAF12842.1; AF203881_15 (AF203881) exodeoxyribonuclease small; E=0.008 COG: XF0660; COG1722 Exonuclease VII small subunit; E=1e-05; exodeoxyribonuclease VII small subunit complement(1136086..1136505) Rhodopirellula baltica SH 1 1790185 NP_864768.1 CDS RB2147 NC_005027.1 1136498 1136689 R hypothetical protein complement(1136498..1136689) Rhodopirellula baltica SH 1 1796733 NP_864769.1 CDS RB2148 NC_005027.1 1136676 1137986 D PMID: 20075061 best DB hits: BLAST: ddbj:BAA89233.1; (AB021180) skeletal myosin heavy chain [Gallus; E=0.15 pir:A32491; myosin heavy chain 1, muscle - fruit fly (Drosophila; E=0.34 pir:B32491; myosin heavy chain 2, muscle - fruit fly (Drosophila; E=0.41; hypothetical protein 1136676..1137986 Rhodopirellula baltica SH 1 1791092 NP_864770.1 CDS RB2150 NC_005027.1 1138030 1138311 R hypothetical protein complement(1138030..1138311) Rhodopirellula baltica SH 1 1794493 NP_864771.1 CDS RB2152 NC_005027.1 1138372 1138839 R best DB hits: PFAM: PF00293; MutT-like domain; E=4.2e-24; hypothetical protein complement(1138372..1138839) Rhodopirellula baltica SH 1 1791611 NP_864772.1 CDS RB2154 NC_005027.1 1138946 1140193 R signal peptide complement(1138946..1140193) Rhodopirellula baltica SH 1 1790292 NP_864773.1 CDS RB2155 NC_005027.1 1140190 1140660 R hypothetical protein complement(1140190..1140660) Rhodopirellula baltica SH 1 1790475 NP_864774.1 CDS RB2156 NC_005027.1 1140679 1140837 R hypothetical protein complement(1140679..1140837) Rhodopirellula baltica SH 1 1792613 NP_864775.1 CDS RB2158 NC_005027.1 1140771 1141043 R hypothetical protein complement(1140771..1141043) Rhodopirellula baltica SH 1 1790041 NP_864776.1 CDS RB2160 NC_005027.1 1141002 1143161 D PMID: 2453362 best DB hits: BLAST: swissprot:P09961; AMY1_DICTH ALPHA-AMYLASE 1 (1,4-ALPHA-D-GLUCAN; E=1e-120 ddbj:BAA22063.1; (D88253) 4-alpha-glucanotransferase; E=1e-114 ddbj:BAA22062.1; (D87907) 4-alpha-glucanotransferase [Pyrococcus; E=1e-112 COG: PAB0118; COG1449 Alpha-amylase/alpha-mannosidase; E=1e-111 Rv3031; COG1543 Uncharacterized ACR; E=1e-04; alpha-amylase 1141002..1143161 Rhodopirellula baltica SH 1 1790279 NP_864777.1 CDS pknH NC_005027.1 1143214 1144158 D PMID: 9634230 best DB hits: BLAST: ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=4e-24 pir:D83637; serinethreonine protein kinase PpkA PA0074 [imported] -; E=1e-23 gb:AAD03499.2; (AF035395) serinethreonine protein kinase PpkA; E=2e-23 COG: BH2504_1; COG0515 Serine/threonine protein kinases; E=4e-25 PFAM: PF00069; Protein kinase domain; E=3.2e-44; serine/threonine-protein kinase pknH 1143214..1144158 Rhodopirellula baltica SH 1 1792045 NP_864778.1 CDS RB2163 NC_005027.1 1144252 1144569 R signal peptide complement(1144252..1144569) Rhodopirellula baltica SH 1 1795662 NP_864779.1 CDS RB2166 NC_005027.1 1144790 1146214 R best DB hits: PFAM: PF02746; Mandelate racemase / muconate lacton; E=0.04; hypothetical protein complement(1144790..1146214) Rhodopirellula baltica SH 1 1795875 NP_864780.1 CDS RB2168 NC_005027.1 1146271 1146378 D hypothetical protein 1146271..1146378 Rhodopirellula baltica SH 1 1796197 NP_864781.1 CDS RB2170 NC_005027.1 1146430 1147911 D PMID: 11823852; hypothetical protein 1146430..1147911 Rhodopirellula baltica SH 1 1789895 NP_864782.1 CDS RB2173 NC_005027.1 1146895 1147959 R hypothetical protein complement(1146895..1147959) Rhodopirellula baltica SH 1 1791851 NP_864783.1 CDS RB2174 NC_005027.1 1148065 1148514 D PMID: 1558950 best DB hits: BLAST: gb:AAB38544.1; (L41661) srrB [Synechococcus sp.]; E=5e-09 pir:A71678; probable response regulatory protein RP237 - Rickettsia; E=2e-08 gb:AAD51348.1; AF173226_5 (AF173226) SmeR [Stenotrophomonas; E=7e-08 COG: RP237_1; COG0784 CheY-like receiver domains; E=7e-09 PA2523; COG0745 Response regulators consisting of a CheY-like; E=9e-08 VC0622_4; COG0784 CheY-like receiver domains; E=9e-08 PFAM: PF00072; Response regulator receiver doma; E=1.1e-10; transcriptional regulator 1148065..1148514 Rhodopirellula baltica SH 1 1793029 NP_864784.1 CDS RB2175 NC_005027.1 1148511 1148807 D signal peptide 1148511..1148807 Rhodopirellula baltica SH 1 1794644 NP_864785.1 CDS RB2176 NC_005027.1 1148648 1149025 D best DB hits: BLAST: pir:E83085; conserved hypothetical protein PA4488 [imported] -; E=0.81; hypothetical protein 1148648..1149025 Rhodopirellula baltica SH 1 1792335 NP_864786.1 CDS RB2178 NC_005027.1 1149035 1149685 D hypothetical protein 1149035..1149685 Rhodopirellula baltica SH 1 1793146 NP_864787.1 CDS RB2179 NC_005027.1 1149988 1150587 D hypothetical protein 1149988..1150587 Rhodopirellula baltica SH 1 1790220 NP_864788.1 CDS RB2181 NC_005027.1 1150628 1151242 D hypothetical protein 1150628..1151242 Rhodopirellula baltica SH 1 1793589 NP_864789.1 CDS RB2182 NC_005027.1 1151579 1152463 R PMID: 8905231 best DB hits: BLAST: pir:S77171; transposase sll1710 - Synechocystis sp. (strain PCC; E=1e-55 gb:AAB72024.1; (U38799) transposase [Synechocystis sp.]; E=7e-55 pir:S35005; probable transposase - Acetobacter xylinus insertion; E=1e-54 COG: sll1710; COG3293 Predicted transposase; E=9e-57 PFAM: PF01511; Transposase; E=9e-35 PF01675; Transposase; E=2.1e-31; transposase complement(1151579..1152463) Rhodopirellula baltica SH 1 1790481 NP_864790.1 CDS RB2185 NC_005027.1 1152529 1152681 R hypothetical protein complement(1152529..1152681) Rhodopirellula baltica SH 1 1796977 NP_864791.1 CDS InsA NC_005027.1 1152692 1153993 R best DB hits: BLAST: gb:AAD45539.1; U70376_1 (U70376) InsA [Streptomyces netropsis]; E=5e-33 gb:AAG60893.1; AF322013_12 (AF322013) ID460 [Bradyrhizobium; E=8e-33 ddbj:BAA19966.1; (D63923) transposase [Acetobacter pasteurianus]; E=1e-26; InsA (transposase) complement(1152692..1153993) Rhodopirellula baltica SH 1 1790582 NP_864792.1 CDS RB2187 NC_005027.1 1153971 1154114 D hypothetical protein 1153971..1154114 Rhodopirellula baltica SH 1 1792826 NP_864793.1 CDS RB2188 NC_005027.1 1154177 1154584 D hypothetical protein 1154177..1154584 Rhodopirellula baltica SH 1 1792544 NP_864794.1 CDS RB2190 NC_005027.1 1154761 1155291 D hypothetical protein 1154761..1155291 Rhodopirellula baltica SH 1 1791019 NP_864795.1 CDS RB2191 NC_005027.1 1155340 1156002 D hypothetical protein 1155340..1156002 Rhodopirellula baltica SH 1 1796956 NP_864796.1 CDS RB2193 NC_005027.1 1156095 1156949 D PMID: 11337471 best DB hits: BLAST: gb:AAK05788.1; AE006399_9 (AE006399) UNKNOWN PROTEIN [Lactococcus; E=1e-18; hypothetical protein 1156095..1156949 Rhodopirellula baltica SH 1 1795551 NP_864797.1 CDS RB2197 NC_005027.1 1157029 1157313 R hypothetical protein complement(1157029..1157313) Rhodopirellula baltica SH 1 1796708 NP_864798.1 CDS RB2198 NC_005027.1 1157235 1157486 D hypothetical protein 1157235..1157486 Rhodopirellula baltica SH 1 1790748 NP_864799.1 CDS RB2200 NC_005027.1 1157514 1159097 R PMID: 10910347 best DB hits: BLAST: pir:C82162; conserved hypothetical protein VC1751 [imported] -; E=3e-56 swissprot:O52401; YGGB_EDWIC HYPOTHETICAL 30.6 KDA PROTEIN IN; E=4e-41 pir:A82318; conserved hypothetical protein VC0480 [imported] -; E=5e-40 COG: VC1751; COG0668 Small-conductance mechanosensitive channel; E=3e-57 PFAM: PF00924; Uncharacterized protein family UPF00; E=2.9e-71; small conductance mechanosensitive ion channel complement(1157514..1159097) Rhodopirellula baltica SH 1 1796676 NP_864800.1 CDS RB2201 NC_005027.1 1159076 1159273 D hypothetical protein 1159076..1159273 Rhodopirellula baltica SH 1 1795487 NP_864801.1 CDS RB2202 NC_005027.1 1159286 1160347 D PMID: 3026906 best DB hits: BLAST: pir:S74628; hypothetical protein slr1772 - Synechocystis sp. (strain; E=1e-122 pir:E82406; probable hydrolase VCA0877 [imported] - Vibrio cholerae; E=6e-50 swissprot:P12256; PAC_BACSH PENICILLIN ACYLASE (PENICILLIN V; E=1e-09 COG: slr1772; COG3049 Penicillin V acylase and related amidases; E=1e-124 PFAM: PF02275; Choloylglycine hydrolase; E=7.3e-95; penicillin acylase 1159286..1160347 Rhodopirellula baltica SH 1 1795829 NP_864802.1 CDS RB2203 NC_005027.1 1160319 1160492 R hypothetical protein complement(1160319..1160492) Rhodopirellula baltica SH 1 1793031 NP_864803.1 CDS RB2204 NC_005027.1 1160497 1161396 R PMID: 10567266 best DB hits: BLAST: pir:A75323; probable chromosome partitioning ATPase, ParA family -; E=1e-15 swissprot:P31856; YGI1_PSEPU HYPOTHETICAL 28.9 KD PROTEIN IN; E=1e-08 pir:S72958; hypothetical protein u0247b - Mycobacterium leprae; E=2e-08 COG: DR2040; COG1192 ATPases involved in chromosome partitioning; E=9e-17 BU326; COG2894 Septum formation inhibitor-activating ATPase; E=1e-04 VC2773; COG1192 ATPases involved in chromosome partitioning; E=2e-04 PFAM: PF02374; Anion-transporting ATPase; E=0.0058 PF00991; ParA family ATPase; E=2.6e-05; ParA family chromosome partitioning ATPase complement(1160497..1161396) Rhodopirellula baltica SH 1 1796147 NP_864804.1 CDS RB2205 NC_005027.1 1161466 1161648 R hypothetical protein complement(1161466..1161648) Rhodopirellula baltica SH 1 1796604 NP_864805.1 CDS RB2206 NC_005027.1 1161608 1162279 R PMID: 8905231 best DB hits: BLAST: pir:S76621; hypothetical protein - Synechocystis sp. (strain PCC; E=9e-23 ddbj:BAA84086.1; (AB032065) hypothetical protein [Streptomyces; E=6e-21 embl:CAB61873.1; (AL133252) hypothetical protein SCE46.22; E=6e-21 COG: slr0092; COG0463 Glycosyltransferases involved in cell wall; E=8e-24 PAB1314; COG1215 Glycosyltransferases, probably involved in cell; E=2e-07 Rv2957; COG0463 Glycosyltransferases involved in cell wall; E=7e-07 PFAM: PF00535; Glycosyl transferase; E=2.6e-21; hypothetical protein complement(1161608..1162279) Rhodopirellula baltica SH 1 1794715 NP_864806.1 CDS RB2209 NC_005027.1 1162331 1163572 R signal peptide complement(1162331..1163572) Rhodopirellula baltica SH 1 1793740 NP_864807.1 CDS RB2211 NC_005027.1 1163498 1163779 D hypothetical protein 1163498..1163779 Rhodopirellula baltica SH 1 1797068 NP_864808.1 CDS RB2212 NC_005027.1 1163797 1164273 D hypothetical protein 1163797..1164273 Rhodopirellula baltica SH 1 1791941 NP_864809.1 CDS RB2216 NC_005027.1 1164291 1164998 R hypothetical protein complement(1164291..1164998) Rhodopirellula baltica SH 1 1794352 NP_864810.1 CDS RB2217 NC_005027.1 1165024 1166499 D hypothetical protein 1165024..1166499 Rhodopirellula baltica SH 1 1791646 NP_864811.1 CDS RB2221 NC_005027.1 1166576 1166764 R hypothetical protein complement(1166576..1166764) Rhodopirellula baltica SH 1 1795611 NP_864812.1 CDS RB2222 NC_005027.1 1166754 1167413 D signal peptide 1166754..1167413 Rhodopirellula baltica SH 1 1796801 NP_864813.1 CDS RB2225 NC_005027.1 1167491 1167613 R hypothetical protein complement(1167491..1167613) Rhodopirellula baltica SH 1 1791715 NP_864814.1 CDS RB2226 NC_005027.1 1167675 1173032 D PMID: 7557402 best DB hits: BLAST: swissprot:Q00808; HET1_PODAN VEGETATIBLE INCOMPATIBILITY PROTEIN; E=7e-18 swissprot:P49695; PKWA_THECU SERINETHREONINE-PROTEIN; E=4e-13 gb:AAG40737.1; AF299085_1 (AF299085) Bap1 [Myxococcus xanthus]; E=2e-12 COG: slr0143_2; COG2319 WD40 repeat protein; E=2e-09 PFAM: PF00400; WD domain, G-beta repeat; E=0.2 PF01011; PQQ enzyme repeat; E=0.66 PF00400; WD domain, G-beta repeat; E=0.12; vegetatible incompatibility protein HET-E-1 1167675..1173032 Rhodopirellula baltica SH 1 1793665 NP_864815.1 CDS RB2231 NC_005027.1 1173061 1174557 D hypothetical protein 1173061..1174557 Rhodopirellula baltica SH 1 1794126 NP_864816.1 CDS RB2234 NC_005027.1 1174607 1174843 D hypothetical protein 1174607..1174843 Rhodopirellula baltica SH 1 1791790 NP_864817.1 CDS RB2235 NC_005027.1 1174887 1175042 D hypothetical protein 1174887..1175042 Rhodopirellula baltica SH 1 1796142 NP_864818.1 CDS RB2237 NC_005027.1 1175268 1175519 R hypothetical protein complement(1175268..1175519) Rhodopirellula baltica SH 1 1795389 NP_864819.1 CDS RB2238 NC_005027.1 1175510 1176826 D PMID: 8125952 best DB hits: BLAST: swissprot:P39662; HMPA_ALCEU FLAVOHEMOPROTEIN (HEMOGLOBIN-LIKE; E=7e-29 swissprot:P49852; HMPA_BACSU FLAVOHEMOPROTEIN (HEMOGLOBIN-LIKE; E=2e-26 swissprot:P26353; HMPA_SALTY FLAVOHEMOPROTEIN (HEMOGLOBIN-LIKE; E=2e-26 COG: BS_hmp_2; COG1018 Flavodoxin reductases (ferredoxin-NADPH; E=1e-27 hmp_2; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases); E=5e-25 BH1058_2; COG1018 Flavodoxin reductases (ferredoxin-NADPH; E=5e-23 PFAM: PF00970; Oxidoreductase FAD-binding doma; E=3.5e-24 PF01794; Ferric reductase like transmemb; E=0.76 PF00175; Oxidoreductase FAD/NAD-binding; E=2e-05; flavohemoprotein 1175510..1176826 Rhodopirellula baltica SH 1 1790780 NP_864820.1 CDS RB2239 NC_005027.1 1176975 1177865 R PMID: 10984043 best DB hits: BLAST: pir:G75333; 3-oxoacyl-acyl carrier protein reductase - Deinococcus; E=1e-16 gb:AAB82041.1; (U59236) unknown [Synechococcus sp. PCC 7942]; E=1e-16 pir:E83152; probable short-chain dehydrogenase PA3957 [imported] -; E=4e-16 COG: DR1943; COG1028 Dehydrogenases with different specificities (related; E=9e-18 BH1506; COG0300 Short-chain dehydrogenases of various substrate; E=3e-15 VNG1341G; COG1028 Dehydrogenases with different specificities; E=3e-14 PFAM: PF00106; short chain dehydrogenase; E=9.2e-43; short-chain dehydrogenase complement(1176975..1177865) Rhodopirellula baltica SH 1 1794020 NP_864821.1 CDS RB2242 NC_005027.1 1177796 1178527 R PMID: 10952301 best DB hits: BLAST: pir:G82383; oxidoreductase, short-chain dehydrogenasereductase; E=2e-20 gb:AAG54602.1; AE005204_12 (AE005204) oxidoreductase; E=7e-20 gb:AAF18286.1; (AF088897) oxidoreductase; orf4 [Zymomonas; E=6e-19 COG: VCA1057; COG0300 Short-chain dehydrogenases of various substrate; E=2e-21 slr0315; COG1028 Dehydrogenases with different specificities; E=7e-20 PA4148; COG1028 Dehydrogenases with different specificities (related; E=3e-18 PFAM: PF00106; short chain dehydrogenase; E=5.3e-49; short chain dehydrogenase/reductase oxidoreductase complement(1177796..1178527) Rhodopirellula baltica SH 1 1790000 NP_864822.1 CDS RB2244 NC_005027.1 1178675 1179253 D PMID: 11859360 best DB hits: BLAST: pir:T44271; glutathione peroxidase homolog [imported] -; E=4e-40 embl:CAB88451.1; (AL353815) glutathione peroxidase; E=4e-38 pir:F83541; probable glutathione peroxidase PA0838 [imported] -; E=5e-38 COG: PA0838; COG0386 Glutathione peroxidase; E=5e-39 PFAM: PF00255; Glutathione peroxidase; E=7e-54; glutathione peroxidase 1178675..1179253 Rhodopirellula baltica SH 1 1793604 NP_864823.1 CDS RB2247 NC_005027.1 1179499 1181238 R best DB hits: BLAST: gb:AAG19229.1; (AE005019) Vng0754c [Halobacterium sp. NRC-1]; E=9e-06 gb:AAF75279.1; AF265353_1 (AF265353) byssal protein Dpfp1; E=0.21 ddbj:BAA94345.1; (AB035520) parchorin [Oryctolagus cuniculus]; E=0.50 PFAM: PF00089; Trypsin; E=0.58; hypothetical protein complement(1179499..1181238) Rhodopirellula baltica SH 1 1795398 NP_864824.1 CDS RB2251 NC_005027.1 1181487 1181714 R hypothetical protein complement(1181487..1181714) Rhodopirellula baltica SH 1 1795525 NP_864825.1 CDS RB2252 NC_005027.1 1181540 1181701 R hypothetical protein complement(1181540..1181701) Rhodopirellula baltica SH 1 1791039 NP_864826.1 CDS RB2253 NC_005027.1 1181661 1182374 D modulates transcription in response to the NADH/NAD(+) redox state; redox-sensing transcriptional repressor Rex 1181661..1182374 Rhodopirellula baltica SH 1 1792432 NP_864827.1 CDS RB2254 NC_005027.1 1182443 1184068 R PMID: 8244397 PMID: 8325651 best DB hits: BLAST: gb:AAA16877.1; (L13329) iduronate-2-sulfatase [Homo sapiens]; E=1e-44 gb:AAA37880.1; (L07921) iduronate sulfatase [Mus musculus]; E=1e-44 gb:AAB33747.1; iduronate-2-sulfatase, IDS {EC 3.1.6.13} [human,; E=5e-44 COG: PA0031; COG3119 Arylsulfatase A and related enzymes; E=3e-38 BS_yqgS; COG1368 Phosphoglycerol transferase and related proteins,; E=0.001 aslA; COG3119 Arylsulfatase A and related enzymes; E=0.001 PFAM: PF00884; Sulfatase; E=3.2e-21; iduronate-2-sulfatase complement(1182443..1184068) Rhodopirellula baltica SH 1 1791287 NP_864828.1 CDS RB2255 NC_005027.1 1184132 1186018 R hypothetical protein complement(1184132..1186018) Rhodopirellula baltica SH 1 1790737 NP_864829.1 CDS RB2258 NC_005027.1 1186140 1186325 R hypothetical protein complement(1186140..1186325) Rhodopirellula baltica SH 1 1790656 NP_864830.1 CDS RB2259 NC_005027.1 1186316 1187020 D hypothetical protein 1186316..1187020 Rhodopirellula baltica SH 1 1796378 NP_864831.1 CDS RB2260 NC_005027.1 1187169 1187276 R hypothetical protein complement(1187169..1187276) Rhodopirellula baltica SH 1 1792134 NP_864832.1 CDS RB2261 NC_005027.1 1187245 1188873 R PMID: 10567266 best DB hits: BLAST: pir:C75455; carboxypeptidase-related protein - Deinococcus; E=1e-118 pir:E82699; carboxypeptidase related protein XF1282 [imported] -; E=8e-47 embl:CAA96915.1; (Z72725) ORF YGL203c [Saccharomyces cerevisiae]; E=1e-05 COG: DR0964; COG2939 Carboxypeptidase C (cathepsin A); E=1e-119; carboxypeptidase-related protein complement(1187245..1188873) Rhodopirellula baltica SH 1 1792111 NP_864833.1 CDS RB2262 NC_005027.1 1188777 1188965 R hypothetical protein complement(1188777..1188965) Rhodopirellula baltica SH 1 1795097 NP_864834.1 CDS RB2263 NC_005027.1 1188804 1188956 D hypothetical protein 1188804..1188956 Rhodopirellula baltica SH 1 1793109 NP_864835.1 CDS RB2264 NC_005027.1 1189102 1189608 D PMID: 9632260 best DB hits: BLAST: swissprot:O68284; MSCL_ERWCA LARGE-CONDUCTANCE MECHANOSENSITIVE; E=2e-13 pir:F82855; large-conductance mechanosensitive channel XF0039; E=4e-13 pir:F83069; conductance mechanosensitive channel PA4614 [imported] -; E=2e-12 COG: XF0039; COG1970 Large-conductance mechanosensitive channel; E=4e-14 PFAM: PF01741; Large-conductance mechanosens; E=1.4e-22; large-conductance mechanosensitive channel 1189102..1189608 Rhodopirellula baltica SH 1 1794473 NP_864836.1 CDS RB2265 NC_005027.1 1189523 1190518 D PMID: 10567266 best DB hits: BLAST: pir:B75555; probable lipaseesterase - Deinococcus radiodurans; E=4e-09 pir:E70914; probable lipO protein - Mycobacterium tuberculosis; E=2e-05 swissprot:P26223; XYNB_BUTFI ENDO-1,4-BETA-XYLANASE B (XYLANASE B); E=3e-04 COG: DR0133; COG0657 Acetyl esterase; E=4e-10 PFAM: PF00326; Prolyl oligopeptidase; E=0.067 PF01738; Dienelactone hydrolase; E=0.00016 PF00561; alpha/beta hydrolase fold; E=0.17; lipase/esterase 1189523..1190518 Rhodopirellula baltica SH 1 1797003 NP_864837.1 CDS msrB NC_005027.1 1190541 1191389 R PMID: 9278503 best DB hits: BLAST: pir:C81315; hypothetical protein Cj1112c [imported] - Campylobacter; E=9e-33 embl:CAB80845.1; (AL161501) protein [Arabidopsis; E=4e-27 gb:AAD03449.1; (AF118223) contains similarity to Methanobacterium; E=5e-27 COG: Cj1112c; COG0229 Conserved domain frequently associated with peptide; E=8e-34 VNG1404G; COG0229 Conserved domain frequently associated with; E=5e-19 XF0849; COG0229 Conserved domain frequently associated with peptide; E=2e-17 PFAM: PF01641; Domain of unknown function DUF25; E=3.7e-46; peptide methionine sulfoxide reductase complement(1190541..1191389) Rhodopirellula baltica SH 1 1794816 NP_864838.1 CDS RB2269 NC_005027.1 1191509 1192471 R PMID: 8590279 best DB hits: BLAST: swissprot:Q55979; Y712_SYNY3 HYPOTHETICAL 35.1 KD PROTEIN SLR0712; E=2e-23 gb:AAF20821.1; AF199025_2 (AF199025) LpiA [Sinorhizobium meliloti]; E=4e-17 gb:AAG55159.1; AE005259_10 (AE005259) orf, hypothetical protein; E=6e-14 COG: slr0712; COG0392 Predicted integral membrane protein; E=2e-24; hypothetical protein complement(1191509..1192471) Rhodopirellula baltica SH 1 1792031 NP_864839.1 CDS RB2272 NC_005027.1 1192508 1193089 R hypothetical protein complement(1192508..1193089) Rhodopirellula baltica SH 1 1795625 NP_864840.1 CDS RB2274 NC_005027.1 1192939 1193331 R hypothetical protein complement(1192939..1193331) Rhodopirellula baltica SH 1 1794419 NP_864841.1 CDS RB2277 NC_005027.1 1193351 1193566 R hypothetical protein complement(1193351..1193566) Rhodopirellula baltica SH 1 1790619 NP_864842.1 CDS RB2278 NC_005027.1 1193534 1195039 D PMID: 3481024 best DB hits: BLAST: gb:AAB82633.1; (AC002387) 5-enolpyruvylshikimate-3-phosphate; E=1e-73 pir:XUMUVS; 3-phosphoshikimate 1-carboxyvinyltransferase (EC; E=1e-72 swissprot:P05466; AROA_ARATH 3-PHOSPHOSHIKIMATE; E=1e-72 COG: VC1732; COG0128 5-enolpyruvylshikimate-3-phosphate synthase; E=2e-70 PFAM: PF00275; EPSP synthase (3-phosphoshikim; E=5.8e-128; 3-phosphoshikimate 1-carboxyvinyltransferase 1193534..1195039 Rhodopirellula baltica SH 1 1794666 NP_864843.1 CDS RB2279 NC_005027.1 1195055 1195816 D hypothetical protein 1195055..1195816 Rhodopirellula baltica SH 1 1790626 NP_864844.1 CDS RB2280 NC_005027.1 1195824 1196060 R hypothetical protein complement(1195824..1196060) Rhodopirellula baltica SH 1 1791751 NP_864845.1 CDS RB2281 NC_005027.1 1196032 1196964 D hypothetical protein 1196032..1196964 Rhodopirellula baltica SH 1 1795369 NP_864846.1 CDS RB2282 NC_005027.1 1196961 1197128 D hypothetical protein 1196961..1197128 Rhodopirellula baltica SH 1 1792781 NP_864847.1 CDS RB2283 NC_005027.1 1197102 1197719 R hypothetical protein complement(1197102..1197719) Rhodopirellula baltica SH 1 1793577 NP_864848.1 CDS RB2284 NC_005027.1 1197486 1198511 D PMID: 10761919 best DB hits: BLAST: gb:AAC09305.1; (AF047044) transposase [Nostoc sp. PCC; E=2e-41 pir:A32816; hypothetical protein, 33K - Pseudomonas atlantica; E=7e-35 pir:B81886; probable transposase NMA1185 [imported] - Neisseria; E=1e-30 PFAM: PF01548; Transposase; E=2.2e-05 PF02371; Transposase IS116/IS110/IS902; E=1.3e-25; transposase 1197486..1198511 Rhodopirellula baltica SH 1 1793144 NP_864849.1 CDS RB2287 NC_005027.1 1198829 1199020 R hypothetical protein complement(1198829..1199020) Rhodopirellula baltica SH 1 1791758 NP_864850.1 CDS RB2288 NC_005027.1 1198969 1199172 D hypothetical protein 1198969..1199172 Rhodopirellula baltica SH 1 1793987 NP_864851.1 CDS RB2290 NC_005027.1 1199219 1199341 D hypothetical protein 1199219..1199341 Rhodopirellula baltica SH 1 1793419 NP_864852.1 CDS parA NC_005027.1 1199317 1200063 D PMID: 9054507 best DB hits: BLAST: swissprot:P37522; SOJ_BACSU SPORULATION INITIATION INHIBITOR; E=8e-50 swissprot:Q9K5N0; SOJ_BACHD SPORULATION INITIATION INHIBITOR; E=6e-48 swissprot:O83296; SOJ_TREPA PROTEIN SOJ HOMOLOG ----- pir:; E=6e-48 COG: BS_soj; COG1192 ATPases involved in chromosome partitioning; E=8e-51 PFAM: PF00142; 4Fe-4S iron sulfur cluster bindin; E=0.00021 PF02374; Anion-transporting ATPase; E=0.013 PF00991; ParA family ATPase; E=4.9e-21; chromosome partitioning protein parA 1199317..1200063 Rhodopirellula baltica SH 1 1795536 NP_864853.1 CDS parB NC_005027.1 1200056 1201045 D PMID: 9634230 best DB hits: BLAST: swissprot:O53595; PARB_MYCTU PROBABLE CHROMOSOME PARTITIONING; E=6e-38 swissprot:P31857; PARB_PSEPU PROBABLE CHROMOSOME PARTITIONING; E=3e-37 swissprot:Q50201; PARB_MYCLE PROBABLE CHROMOSOME PARTITIONING; E=3e-37 COG: Rv3917c; COG1475 Predicted transcriptional regulators; E=5e-39 PFAM: PF02195; ParB-like nuclease domain; E=4.8e-30 PF01381; Helix-turn-helix; E=0.3; chromosome partitioning protein parB 1200056..1201045 Rhodopirellula baltica SH 1 1795932 NP_864854.1 CDS RB2297 NC_005027.1 1201195 1201509 R hypothetical protein complement(1201195..1201509) Rhodopirellula baltica SH 1 1794062 NP_864855.1 CDS RB2298 NC_005027.1 1201605 1202012 R hypothetical protein complement(1201605..1202012) Rhodopirellula baltica SH 1 1795734 NP_864856.1 CDS RB2299 NC_005027.1 1201943 1204336 D PMID: 9634230 best DB hits: BLAST: pir:G71532; probable threoninetyrosine-specific protein kinase (EC; E=2e-31 gb:AAF73573.1; (AE002326) serinethreonine protein kinase; E=2e-31 pir:D83637; serinethreonine protein kinase PpkA PA0074 [imported] -; E=6e-28 COG: CT301_1; COG0515 Serine/threonine protein kinases; E=2e-32 PFAM: PF00069; Protein kinase domain; E=5.7e-13 PF00989; PAS domain; E=3.8e-06 PF00785; PAC motif; E=0.74; serine/threonine-protein kinase 1201943..1204336 Rhodopirellula baltica SH 1 1796614 NP_864857.1 CDS RB2302 NC_005027.1 1204388 1204528 D hypothetical protein 1204388..1204528 Rhodopirellula baltica SH 1 1794142 NP_864858.1 CDS rpsH NC_005027.1 1204509 1205219 D PMID: 8432708 best DB hits: BLAST: pir:C82583; RNA polymerase sigma-H factor XF2239 [imported] -; E=1e-19 pir:S77368; transcription initiation factor sigma E slr1545 -; E=2e-19 gb:AAD42769.1; AF121849_1 (AF121849) SigG [Synechococcus sp. PCC; E=7e-18 COG: XF2239; COG1595 DNA-directed RNA polymerase specialized sigma; E=1e-20 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=1.5e-18 PF00140; Sigma-70 factor; E=0.55; RNA polymerase sigma-H factor 1204509..1205219 Rhodopirellula baltica SH 1 1794520 NP_864859.1 CDS RB2304 NC_005027.1 1205216 1206748 D hypothetical protein 1205216..1206748 Rhodopirellula baltica SH 1 1793871 NP_864860.1 CDS RB2306 NC_005027.1 1206782 1206907 D hypothetical protein 1206782..1206907 Rhodopirellula baltica SH 1 1795458 NP_864861.1 CDS RB2308 NC_005027.1 1206969 1208933 D signal peptide 1206969..1208933 Rhodopirellula baltica SH 1 1794179 NP_864862.1 CDS RB2310 NC_005027.1 1209222 1209545 R hypothetical protein complement(1209222..1209545) Rhodopirellula baltica SH 1 1793999 NP_864863.1 CDS RB2312 NC_005027.1 1209542 1209682 R hypothetical protein complement(1209542..1209682) Rhodopirellula baltica SH 1 1792436 NP_864864.1 CDS RB2314 NC_005027.1 1209644 1209892 D hypothetical protein 1209644..1209892 Rhodopirellula baltica SH 1 1790634 NP_864865.1 CDS RB2316 NC_005027.1 1210048 1210587 R signal peptide complement(1210048..1210587) Rhodopirellula baltica SH 1 1796669 NP_864866.1 CDS RB2317 NC_005027.1 1210643 1211131 R hypothetical protein complement(1210643..1211131) Rhodopirellula baltica SH 1 1795292 NP_864867.1 CDS RB2319 NC_005027.1 1211152 1211427 D hypothetical protein 1211152..1211427 Rhodopirellula baltica SH 1 1795274 NP_864868.1 CDS RB2320 NC_005027.1 1211269 1211568 R hypothetical protein complement(1211269..1211568) Rhodopirellula baltica SH 1 1793893 NP_864869.1 CDS RB2321 NC_005027.1 1211620 1212345 R hypothetical protein complement(1211620..1212345) Rhodopirellula baltica SH 1 1793358 NP_864870.1 CDS RB2326 NC_005027.1 1212437 1212778 R hypothetical protein complement(1212437..1212778) Rhodopirellula baltica SH 1 1793040 NP_864871.1 CDS RB2327 NC_005027.1 1212750 1212875 D hypothetical protein 1212750..1212875 Rhodopirellula baltica SH 1 1794683 NP_864872.1 CDS RB2328 NC_005027.1 1213057 1213398 R hypothetical protein complement(1213057..1213398) Rhodopirellula baltica SH 1 1792333 NP_864873.1 CDS RB2329 NC_005027.1 1213386 1213925 R signal peptide complement(1213386..1213925) Rhodopirellula baltica SH 1 1791300 NP_864874.1 CDS RB2330 NC_005027.1 1214014 1214565 R hypothetical protein complement(1214014..1214565) Rhodopirellula baltica SH 1 1796345 NP_864875.1 CDS RB2331 NC_005027.1 1214687 1215088 R hypothetical protein complement(1214687..1215088) Rhodopirellula baltica SH 1 1790209 NP_864876.1 CDS RB2334 NC_005027.1 1215181 1215450 R hypothetical protein complement(1215181..1215450) Rhodopirellula baltica SH 1 1792691 NP_864877.1 CDS RB2335 NC_005027.1 1215464 1215610 D hypothetical protein 1215464..1215610 Rhodopirellula baltica SH 1 1790518 NP_864878.1 CDS RB2336 NC_005027.1 1215693 1215929 R hypothetical protein complement(1215693..1215929) Rhodopirellula baltica SH 1 1795860 NP_864879.1 CDS RB2337 NC_005027.1 1216113 1216652 R hypothetical protein complement(1216113..1216652) Rhodopirellula baltica SH 1 1796510 NP_864880.1 CDS RB2338 NC_005027.1 1216797 1216943 D hypothetical protein 1216797..1216943 Rhodopirellula baltica SH 1 1794263 NP_864881.1 CDS RB2339 NC_005027.1 1217004 1217573 R PMID: 10567266 best DB hits: BLAST: pir:D75339; hypothetical protein - Deinococcus radiodurans (strain; E=9e-22; hypothetical protein complement(1217004..1217573) Rhodopirellula baltica SH 1 1793439 NP_864882.1 CDS RB2340 NC_005027.1 1217548 1217679 R hypothetical protein complement(1217548..1217679) Rhodopirellula baltica SH 1 1793642 NP_864883.1 CDS RB2341 NC_005027.1 1217720 1217932 R signal peptide complement(1217720..1217932) Rhodopirellula baltica SH 1 1795030 NP_864884.1 CDS RB2342 NC_005027.1 1217901 1218119 D hypothetical protein 1217901..1218119 Rhodopirellula baltica SH 1 1792664 NP_864885.1 CDS RB2343 NC_005027.1 1218233 1218667 R signal peptide complement(1218233..1218667) Rhodopirellula baltica SH 1 1795051 NP_864886.1 CDS RB2344 NC_005027.1 1218661 1218927 D hypothetical protein 1218661..1218927 Rhodopirellula baltica SH 1 1793014 NP_864887.1 CDS RB2345 NC_005027.1 1218758 1218946 R hypothetical protein complement(1218758..1218946) Rhodopirellula baltica SH 1 1794128 NP_864888.1 CDS RB2346 NC_005027.1 1218937 1219605 R hypothetical protein complement(1218937..1219605) Rhodopirellula baltica SH 1 1790177 NP_864889.1 CDS RB2349 NC_005027.1 1219602 1220855 R hypothetical protein complement(1219602..1220855) Rhodopirellula baltica SH 1 1796030 NP_864890.1 CDS RB2350 NC_005027.1 1220890 1221003 D hypothetical protein 1220890..1221003 Rhodopirellula baltica SH 1 1795741 NP_864891.1 CDS RB2351 NC_005027.1 1220991 1221392 D hypothetical protein 1220991..1221392 Rhodopirellula baltica SH 1 1792484 NP_864892.1 CDS RB2353 NC_005027.1 1221322 1221696 R signal peptide complement(1221322..1221696) Rhodopirellula baltica SH 1 1791279 NP_864893.1 CDS RB2355 NC_005027.1 1221808 1222320 R PMID: 8682784 best DB hits: BLAST: ddbj:BAB05587.1; (AP001513) BH1868~unknown conserved protein; E=7e-20 pir:T30571; hypothetical protein - Bacillus megaterium -----; E=3e-16 swissprot:P49855; YKKB_BACSU HYPOTHETICAL 20.1 KD PROTEIN IN; E=6e-16 COG: BH1868; COG1670 Acetyltransferases, including N-acetylases of; E=7e-21 PFAM: PF00583; Acetyltransferase (GNAT) family; E=6.3e-12; acetyltransferase complement(1221808..1222320) Rhodopirellula baltica SH 1 1791384 NP_864894.1 CDS RB2357 NC_005027.1 1222268 1222534 R hypothetical protein complement(1222268..1222534) Rhodopirellula baltica SH 1 1790008 NP_864895.1 CDS RB2358 NC_005027.1 1222494 1222691 D hypothetical protein 1222494..1222691 Rhodopirellula baltica SH 1 1790554 NP_864896.1 CDS RB2359 NC_005027.1 1222688 1222876 R hypothetical protein complement(1222688..1222876) Rhodopirellula baltica SH 1 1790807 NP_864897.1 CDS RB2360 NC_005027.1 1223001 1223153 R hypothetical protein complement(1223001..1223153) Rhodopirellula baltica SH 1 1796314 NP_864898.1 CDS RB2361 NC_005027.1 1223128 1223244 D hypothetical protein 1223128..1223244 Rhodopirellula baltica SH 1 1789982 NP_864899.1 CDS RB2362 NC_005027.1 1223386 1223646 R hypothetical protein complement(1223386..1223646) Rhodopirellula baltica SH 1 1794149 NP_864900.1 CDS RB2364 NC_005027.1 1223863 1224651 D PMID: 12004073 best DB hits: BLAST: pir:A72359; conserved hypothetical protein - Thermotoga maritima; E=0.033 gb:AAA02747.1; (L13655) membrane protein [Saccharum hybrid; E=0.055 gb:AAF88090.1; AC025417_18 (AC025417) T12C24.28 [Arabidopsis; E=0.057 COG: TM0584; COG0705 Uncharacterized membrane protein (homolog of; E=0.003 PFAM: PF01694; Rhomboid family; E=3.4e-07; hypothetical protein 1223863..1224651 Rhodopirellula baltica SH 1 1795021 NP_864901.1 CDS RB2365 NC_005027.1 1224623 1226167 D hypothetical protein 1224623..1226167 Rhodopirellula baltica SH 1 1795066 NP_864902.1 CDS RB2367 NC_005027.1 1226195 1228564 R best DB hits: BLAST: pir:B70535; probable sulfatase (EC 3.1.6.-) atsD - Mycobacterium; E=0.0 pir:E70533; probable sulfatase (EC 3.1.6.-) atsB - Mycobacterium; E=1e-160 pir:B70643; probable sulfatase (EC 3.1.6.-) atsA - Mycobacterium; E=1e-137 COG: Rv0663; COG3119 Arylsulfatase A and related enzymes; E=0.0 PFAM: PF00884; Sulfatase; E=2e-129; sulfatase atsD complement(1226195..1228564) Rhodopirellula baltica SH 1 1793761 NP_864903.1 CDS RB2369 NC_005027.1 1228604 1229008 R hypothetical protein complement(1228604..1229008) Rhodopirellula baltica SH 1 1792672 NP_864904.1 CDS RB2370 NC_005027.1 1229023 1229187 R hypothetical protein complement(1229023..1229187) Rhodopirellula baltica SH 1 1795771 NP_864905.1 CDS RB2371 NC_005027.1 1229165 1229797 R hypothetical protein complement(1229165..1229797) Rhodopirellula baltica SH 1 1795871 NP_864906.1 CDS RB2372 NC_005027.1 1229953 1230129 D hypothetical protein 1229953..1230129 Rhodopirellula baltica SH 1 1794638 NP_864907.1 CDS fdh NC_005027.1 1230126 1231334 R PMID: 8169197 best DB hits: BLAST: pir:F70090; probable formaldehyde dehydrogenase (EC 1.2.1.46) yycR -; E=1e-151 swissprot:P46154; FADH_PSEPU GLUTATHIONE-INDEPENDENT FORMALDEHYDE; E=1e-140 pir:E82969; glutathione-independent formaldehyde dehydrogenase; E=1e-138 COG: BS_yycR; COG1063 Threonine dehydrogenase and related Zn-dependent; E=1e-152 PFAM: PF01262; Alanine dehydrogenase/pyridine nucl; E=0.17 PF00107; Zinc-binding dehydrogenases; E=3.1e-48; formaldehyde dehydrogenase complement(1230126..1231334) Rhodopirellula baltica SH 1 1796367 NP_864908.1 CDS RB2374 NC_005027.1 1231392 1231505 D hypothetical protein 1231392..1231505 Rhodopirellula baltica SH 1 1794123 NP_864909.1 CDS RB2375 NC_005027.1 1231493 1231948 D hypothetical protein 1231493..1231948 Rhodopirellula baltica SH 1 1790575 NP_864910.1 CDS atsA NC_005027.1 1231979 1236811 D PMID: 7744061 best DB hits: BLAST: swissprot:P51691; ARS_PSEAE ARYLSULFATASE (ARYL-SULFATE; E=9e-73 pir:S69336; arylsulfatase (EC 3.1.6.1) - Pseudomonas aeruginosa; E=4e-71 pir:T45548; arylsulfatase (EC 3.1.6.1) [validated] - Klebsiella; E=2e-63 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=8e-74 PFAM: PF00884; Sulfatase; E=5.5e-93; arylsulfatase 1231979..1236811 Rhodopirellula baltica SH 1 1793801 NP_864911.1 CDS RB2378 NC_005027.1 1236812 1237018 D hypothetical protein 1236812..1237018 Rhodopirellula baltica SH 1 1790087 NP_864912.1 CDS RB2379 NC_005027.1 1236816 1237034 R hypothetical protein complement(1236816..1237034) Rhodopirellula baltica SH 1 1796624 NP_864913.1 CDS ibeB NC_005027.1 1236988 1238832 R PMID: 99242786 best DB hits: BLAST: gb:AAD30205.1; (AF094824) IbeB [Escherichia coli]; E=3e-33 swissprot:P77211; IBEB_ECOLI PROBABLE OUTER MEMBRANE LIPOPROTEIN; E=4e-33 gb:AAG54905.1; AE005237_1 (AE005237) resistance protein; E=1e-32 COG: ylcB; COG1538 Outer membrane protein; E=4e-34 PFAM: PF02321; Outer membrane efflux protein; E=1.3e-09; outer membrane lipoprotein IbeB complement(1236988..1238832) Rhodopirellula baltica SH 1 1791565 NP_864914.1 CDS RB2382 NC_005027.1 1238921 1239148 D hypothetical protein 1238921..1239148 Rhodopirellula baltica SH 1 1794002 NP_864915.1 CDS mexB NC_005027.1 1239120 1242554 R PMID: 7968531 PMID: 10187844 PMID: 10984043 best DB hits: BLAST: pir:H83071; RND multidrug efflux transporter MexD PA4598 [imported]; E=7e-91 embl:CAC14595.1; (AJ252200) RND protein; E=2e-85 swissprot:P52002; MEXB_PSEAE MULTIDRUG RESISTANCE PROTEIN MEXB; E=6e-85 COG: PA4598; COG0841 Cation/multidrug efflux pump; E=7e-92 PFAM: PF00873; AcrB/AcrD/AcrF family; E=7.9e-188; multidrug resistance protein MexB complement(1239120..1242554) Rhodopirellula baltica SH 1 1793603 NP_864916.1 CDS RB2384 NC_005027.1 1242500 1242697 R hypothetical protein complement(1242500..1242697) Rhodopirellula baltica SH 1 1795755 NP_864917.1 CDS mexA NC_005027.1 1242734 1244320 R PMID: 7968531 best DB hits: BLAST: gb:AAD12178.1; (AF029405) periplasmic linker protein [Pseudomonas; E=8e-20 swissprot:P37636; YHIU_ECOLI HYPOTHETICAL 41.2 KD LIPOPROTEIN IN; E=3e-19 gb:AAG58654.1; AE005576_13 (AE005576) membrane protein; E=4e-19 COG: yhiU; COG0845 Membrane-fusion protein; E=3e-20 PFAM: PF00364; Biotin-requiring enzyme; E=0.0015 PF00529; HlyD family secretion protein; E=3.1e-06; multidrug resistance protein MexA complement(1242734..1244320) Rhodopirellula baltica SH 1 1790521 NP_864918.1 CDS RB2391 NC_005027.1 1244298 1244843 R hypothetical protein complement(1244298..1244843) Rhodopirellula baltica SH 1 1794194 NP_864919.1 CDS RB2394 NC_005027.1 1244920 1245630 R PMID: 9679194 best DB hits: BLAST: swissprot:O58988; KCY_PYRHO CYTIDYLATE KINASE (CK) (CYTIDINE; E=1e-04 swissprot:Q58071; KCY_METJA CYTIDYLATE KINASE (CK) (CYTIDINE; E=0.005 swissprot:O05982; KCY_SULAC CYTIDYLATE KINASE (CK) (CYTIDINE; E=0.005 COG: PH1265; COG1102 Cytidylate kinase 2; E=1e-05; cytidylate kinase complement(1244920..1245630) Rhodopirellula baltica SH 1 1791596 NP_864920.1 CDS RB2395 NC_005027.1 1245553 1246050 D hypothetical protein 1245553..1246050 Rhodopirellula baltica SH 1 1791310 NP_864921.1 CDS atoC NC_005027.1 1246032 1247489 D PMID: 9278503 PMID: 9097040 PMID: 8346225 best DB hits: BLAST: swissprot:Q06065; ATOC_ECOLI ACETOACETATE METABOLISM REGULATORY; E=4e-87 gb:AAG45333.1; AF273214_1 (AF273214) SasR [Myxococcus xanthus]; E=2e-85 swissprot:P14375; HYDG_ECOLI transcriptional regulator; E=1e-81 COG: atoC; COG2204 AAA superfamily ATPases with N-terminal receiver; E=4e-88 PFAM: PF00072; Response regulator receiver doma; E=6.6e-32 PF00004; ATPase associated with va; E=0.008 PF00158; Sigma-54 interaction domain; E=9.4e-122; acetoacetate metabolism regulatory protein 1246032..1247489 Rhodopirellula baltica SH 1 1796990 NP_864922.1 CDS RB2398 NC_005027.1 1247520 1248404 R hypothetical protein complement(1247520..1248404) Rhodopirellula baltica SH 1 1793541 NP_864923.1 CDS RB2399 NC_005027.1 1248366 1248524 D hypothetical protein 1248366..1248524 Rhodopirellula baltica SH 1 1796250 NP_864924.1 CDS RB2400 NC_005027.1 1248499 1248699 R hypothetical protein complement(1248499..1248699) Rhodopirellula baltica SH 1 1793626 NP_864925.1 CDS cpo NC_005027.1 1248679 1250799 D PMID: 7744081 best DB hits: BLAST: swissprot:P49053; PRXC_CURIN VANADIUM CHLOROPEROXIDASE (VCPO); E=2e-25 pdb:1VNS; Recombinant Apo-Chloroperoxidase From Curvularia; E=2e-25 pdb:1VNF; Chloroperoxidase From The Fungus Curvularia; E=1e-24 PFAM: PF00404; Dockerin type I repeat; E=0.4 PF02328; Vanadium chloroperoxidase; E=1.5e-20; vanadium chloroperoxidase 1248679..1250799 Rhodopirellula baltica SH 1 1795272 NP_864926.1 CDS uxuB NC_005027.1 1250881 1252389 R PMID: 7610040 best DB hits: BLAST: pir:D83353; mannitol dehydrogenase PA2342 [imported] - Pseudomonas; E=1e-116 gb:AAC04472.1; (AF007800) mannitol dehydrogenase [Pseudomonas; E=1e-111 embl:CAA96356.1; (Z71688) ORF YNR073c [Saccharomyces cerevisiae]; E=1e-102 COG: PA2342; COG0246 Mannitol-1-phosphate/altronate dehydrogenases; E=1e-117 PFAM: PF01232; Mannitol dehydrogenase; E=9.3e-176; D-mannonate oxidoreductase complement(1250881..1252389) Rhodopirellula baltica SH 1 1792362 NP_864927.1 CDS RB2404 NC_005027.1 1252408 1254135 R PMID: 10086841; hypothetical protein complement(1252408..1254135) Rhodopirellula baltica SH 1 1795312 NP_864928.1 CDS RB2408 NC_005027.1 1254300 1255103 D PMID: 9687406 best DB hits: BLAST: embl:CAB61226.1; (Y17305) hypothetical protein [Bacillus; E=2e-15 swissprot:P43965; YAFM_HAEIN HYPOTHETICAL PROTEIN HI0217 -----; E=4e-04 pir:E81971; hypothetical protein NMA0532 [imported] - Neisseria; E=4e-04 COG: HI0217; COG1943 Predicted transposase; E=3e-05 PFAM: PF00637; 7-fold repeat in Clathrin and; E=0.77 PF02178; AT hook motif; E=0.72; hypothetical protein 1254300..1255103 Rhodopirellula baltica SH 1 1791221 NP_864929.1 CDS RB2412 NC_005027.1 1255432 1256535 D signal peptide 1255432..1256535 Rhodopirellula baltica SH 1 1792110 NP_864930.1 CDS RB2414 NC_005027.1 1256570 1256716 D hypothetical protein 1256570..1256716 Rhodopirellula baltica SH 1 1793680 NP_864931.1 CDS RB2415 NC_005027.1 1256739 1256849 D hypothetical protein 1256739..1256849 Rhodopirellula baltica SH 1 1793359 NP_864932.1 CDS RB2416 NC_005027.1 1257029 1258198 R PMID: 10567266 best DB hits: BLAST: pir:A75496; conserved hypothetical protein - Deinococcus radiodurans; E=2e-04 pir:C71139; hypothetical protein PH0326 - Pyrococcus horikoshii; E=2e-04 pir:A72430; hypothetical protein - Thermotoga maritima (strain MSB8); E=0.002 COG: DR0620_2; COG1305 transglutaminases, cysteine; E=1e-05 PFAM: PF01841; Transglutaminase-like superfam; E=0.014; transglutaminase complement(1257029..1258198) Rhodopirellula baltica SH 1 1791952 NP_864933.1 CDS RB2418 NC_005027.1 1258302 1258877 R signal peptide complement(1258302..1258877) Rhodopirellula baltica SH 1 1791552 NP_864934.1 CDS RB2420 NC_005027.1 1258838 1260481 D best DB hits: BLAST: gb:AAD50452.1; AF170704_2 (AF170704) SpcB [Streptomyces; E=1e-04 gb:AAF63338.1; AF244574_1 (AF244574) myo-inositol-2-dehydrogenase; E=3e-04 gb:AAD13550.1; (AF080235) oxidoreductase homolog [Streptomyces; E=0.001 COG: BH0710; COG0673 Predicted dehydrogenases and related proteins; E=2e-04 PFAM: PF01408; Oxidoreductase, NAD-bind; E=5.8e-11; myo-inositol-2-dehydrogenase 1258838..1260481 Rhodopirellula baltica SH 1 1790328 NP_864935.1 CDS RB2424 NC_005027.1 1260478 1260759 D hypothetical protein 1260478..1260759 Rhodopirellula baltica SH 1 1792660 NP_864936.1 CDS RB2425 NC_005027.1 1260766 1261074 D hypothetical protein 1260766..1261074 Rhodopirellula baltica SH 1 1797116 NP_864937.1 CDS RB2426 NC_005027.1 1261010 1262740 R PMID: 8905232 best DB hits: BLAST: swissprot:P77381; YBES_ECOLI HYPOTHETICAL 55.3 KDA PROTEIN IN; E=0.093 gb:AAG54981.1; AE005243_10 (AE005243) enzyme of; E=0.31 gb:AAG53090.1; (AF284647) phosphoprotein [Newcastle disease; E=0.67; hypothetical protein complement(1261010..1262740) Rhodopirellula baltica SH 1 1794996 NP_864938.1 CDS RB2428 NC_005027.1 1262854 1263540 R hypothetical protein complement(1262854..1263540) Rhodopirellula baltica SH 1 1793059 NP_864939.1 CDS dnaK NC_005027.1 1263537 1265300 R PMID: 9735342 best DB hits: BLAST: swissprot:P77319; HSCC_ECOLI CHAPERONE PROTEIN HSCC (HSC62); E=1e-92 gb:AAG54984.1; AE005244_2 (AE005244) dnaK protein; E=3e-91 embl:CAA06391.1; (AJ005129) dnaK [Thermotoga maritima]; E=3e-88 COG: ybeW; COG0443 Molecular chaperone; E=1e-93 PFAM: PF01869; BadF/BadG/BcrA/BcrD ATPase fa; E=0.37 PF00012; Hsp70 protein; E=9.1e-147; chaperone protein HscC complement(1263537..1265300) Rhodopirellula baltica SH 1 1792136 NP_864940.1 CDS RB2431 NC_005027.1 1265293 1265493 R hypothetical protein complement(1265293..1265493) Rhodopirellula baltica SH 1 1796882 NP_864941.1 CDS RB2432 NC_005027.1 1265557 1266390 D best DB hits: BLAST: gb:AAD20116.1; (AC006201) unknown protein [Arabidopsis thaliana]; E=0.030 pir:T16263; hypothetical protein F35D11.3 - Caenorhabditis elegans; E=0.096 pir:T39047; hypothetical protein SPAC6F6.13c - fission yeast; E=0.12; hypothetical protein 1265557..1266390 Rhodopirellula baltica SH 1 1795478 NP_864942.1 CDS RB2434 NC_005027.1 1266402 1266647 R PMID: 10567266 best DB hits: BLAST: pir:H75402; conserved hypothetical protein - Deinococcus radiodurans; E=7e-12 pir:E82441; conserved hypothetical protein VCA0582 [imported] -; E=2e-05 pir:C81983; hypothetical protein NMA0633 [imported] - Neisseria; E=2e-04 COG: DR1391; COG2501 Uncharacterized ACR; E=7e-13 PFAM: PF01479; S4 domain; E=2.8e-06; RNA-binding protein complement(1266402..1266647) Rhodopirellula baltica SH 1 1794835 NP_864943.1 CDS RB2435 NC_005027.1 1266644 1267720 R best DB hits: BLAST: pir:T45676; hypothetical protein F14P22.150 - Arabidopsis thaliana; E=0.043 PFAM: PF02455; Hexon-associated protein (III; E=0.046; hypothetical protein complement(1266644..1267720) Rhodopirellula baltica SH 1 1794038 NP_864944.1 CDS RB2436 NC_005027.1 1267766 1268971 R hypothetical protein complement(1267766..1268971) Rhodopirellula baltica SH 1 1794845 NP_864945.1 CDS RB2440 NC_005027.1 1269211 1273044 R PMID: 8905231 best DB hits: BLAST: pir:A58519; hypothetical 345 protein - Streptomyces coelicolor; E=2e-15 pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=1e-14 pir:T17478; hypothetical protein PCZA361.11 - Amycolatopsis orientalis; E=2e-14 COG: PA1112; COG2133 Glucose/sorbosone dehydrogenases; E=7e-13 PFAM: PF00138; Legume lectins alpha domain; E=0.059; glucosesorbosone dehydrogenase complement(1269211..1273044) Rhodopirellula baltica SH 1 1796423 NP_864946.1 CDS RB2442 NC_005027.1 1273297 1276449 R best DB hits: PFAM: PF00404; Dockerin type I repeat; E=0.0038; hypothetical protein complement(1273297..1276449) Rhodopirellula baltica SH 1 1796495 NP_864947.1 CDS RB2447 NC_005027.1 1276508 1276789 R hypothetical protein complement(1276508..1276789) Rhodopirellula baltica SH 1 1795113 NP_864948.1 CDS RB2448 NC_005027.1 1276780 1278513 D signal peptide 1276780..1278513 Rhodopirellula baltica SH 1 1793543 NP_864949.1 CDS RB2451 NC_005027.1 1278610 1278882 D hypothetical protein 1278610..1278882 Rhodopirellula baltica SH 1 1795167 NP_864950.1 CDS RB2454 NC_005027.1 1278899 1279582 D signal peptide 1278899..1279582 Rhodopirellula baltica SH 1 1797063 NP_864951.1 CDS RB2456 NC_005027.1 1279589 1279705 D signal peptide 1279589..1279705 Rhodopirellula baltica SH 1 1794485 NP_864952.1 CDS RB2457 NC_005027.1 1279788 1280144 D hypothetical protein 1279788..1280144 Rhodopirellula baltica SH 1 1796921 NP_864953.1 CDS RB2459 NC_005027.1 1280204 1280452 R hypothetical protein complement(1280204..1280452) Rhodopirellula baltica SH 1 1790844 NP_864954.1 CDS RB2460 NC_005027.1 1280449 1281942 R best DB hits: BLAST: pir:B69196; conserved hypothetical protein MTH72 - Methanobacterium; E=0.51 pir:T31314; hypothetical protein 2 - Cenarchaeum symbiosum -----; E=0.64 gb:AAB63645.1; (AC001645) DNA binding protein (CDC27SH) isolog; E=0.66 PFAM: PF00515; TPR Domain; E=0.017; hypothetical protein complement(1280449..1281942) Rhodopirellula baltica SH 1 1793704 NP_864955.1 CDS RB2461 NC_005027.1 1281939 1283837 R hypothetical protein complement(1281939..1283837) Rhodopirellula baltica SH 1 1791698 NP_864956.1 CDS RB2462 NC_005027.1 1283825 1284007 D best DB hits: BLAST: gb:AAF47944.1; (AE003482) CG13708 gene product [Drosophila; E=0.70; hypothetical protein 1283825..1284007 Rhodopirellula baltica SH 1 1795565 NP_864957.1 CDS RB2463 NC_005027.1 1284165 1284404 D hypothetical protein 1284165..1284404 Rhodopirellula baltica SH 1 1794981 NP_864958.1 CDS epsB NC_005027.1 1284692 1287262 R PMID: 7476194 best DB hits: BLAST: pir:G70066; capsular polysaccharide biosynthesis homolog ywqD -; E=2e-28 swissprot:Q45409; EPSB_BURSO EPS I POLYSACCHARIDE EXPORT PROTEIN; E=2e-28 pir:G82262; probable exopolysaccharide biosynthesis protein VC0937; E=8e-28 COG: BS_ywqD; COG0489 ATPases involved in chromosome partitioning; E=2e-29 VNG0946G; COG0455 ATPases involved in chromosome partitioning; E=3e-08 BH3027; COG2894 Septum formation inhibitor-activating ATPase; E=6e-08 PFAM: PF00142; 4Fe-4S iron sulfur cluster bindin; E=0.016 PF00991; ParA family ATPase; E=0.3; capsular polysaccharide biosynthesis-like protein complement(1284692..1287262) Rhodopirellula baltica SH 1 1796691 NP_864959.1 CDS RB2465 NC_005027.1 1287232 1287390 D hypothetical protein 1287232..1287390 Rhodopirellula baltica SH 1 1796278 NP_864960.1 CDS RB2466 NC_005027.1 1287335 1287487 R hypothetical protein complement(1287335..1287487) Rhodopirellula baltica SH 1 1794502 NP_864961.1 CDS RB2467 NC_005027.1 1287454 1287654 D hypothetical protein 1287454..1287654 Rhodopirellula baltica SH 1 1790137 NP_864962.1 CDS RB2469 NC_005027.1 1288021 1288788 R PMID: 10931327 best DB hits: BLAST: embl:CAB63303.1; (AJ251712) glycosyltransferase-like protein; E=1e-47 embl:CAB63284.1; (AJ251713) glycosyltransferase-like protein; E=2e-47 gb:AAD47916.1; AF127522_3 (AF127522) ; E=1e-39 COG: jhp0094; COG0463 Glycosyltransferases involved in cell wall; E=6e-32 RP339; COG0463 Glycosyltransferases involved in cell wall biogenesis; E=4e-04 PAB1314; COG1215 Glycosyltransferases, probably involved in cell; E=8e-04 PFAM: PF00535; Glycosyl transferase; E=1.9e-28; glycosyltransferase-like protein complement(1288021..1288788) Rhodopirellula baltica SH 1 1792762 NP_864963.1 CDS RB2470 NC_005027.1 1288767 1289297 R acetyltransferase believed to catalyze the addition of the acetyl group that is attached through an O linkage to the first fucosyl residue of the colanic acid repetitive unit (E unit); colanic acid biosynthesis acetyltransferase WcaF complement(1288767..1289297) Rhodopirellula baltica SH 1 1795465 NP_864964.1 CDS RB2471 NC_005027.1 1289514 1290824 R PMID: 8905231 best DB hits: BLAST: pir:S74778; hypothetical protein slr1077 - Synechocystis sp. (strain; E=5e-34 gb:AAD43836.1; AF076290_6 (AF076290) mannosyltransferase; E=4e-16 embl:CAB43611.1; (AJ239004) galactosyl transferase [Streptococcus; E=9e-11 COG: slr1077; COG0438 Predicted glycosyltransferases; E=5e-35 PFAM: PF00534; Glycosyl transferases group 1; E=5e-21; poly(glycerol-phosphate) alpha-glucosyltransferase complement(1289514..1290824) Rhodopirellula baltica SH 1 1795940 NP_864965.1 CDS RB2472 NC_005027.1 1290912 1292252 R hypothetical protein complement(1290912..1292252) Rhodopirellula baltica SH 1 1797101 NP_864966.1 CDS RB2473 NC_005027.1 1292292 1293422 R PMID: 10382966 best DB hits: BLAST: pir:D72511; probable hexosyltransferase (EC 2.4.1.-) APE2066; E=2e-09 ddbj:BAB06407.1; (AP001516); E=1e-07 pir:E72354; probable hexosyltransferase (EC 2.4.1.-) TM0622 -; E=2e-06 COG: APE2066; COG0438 Predicted glycosyltransferases; E=1e-10 PFAM: PF00534; Glycosyl transferases group 1; E=1.2e-25; hexosyltransferase complement(1292292..1293422) Rhodopirellula baltica SH 1 1795718 NP_864967.1 CDS RB2474 NC_005027.1 1293454 1294251 R PMID: 10360571 best DB hits: BLAST: pir:E72354; probable hexosyltransferase (EC 2.4.1.-) TM0622 -; E=3e-22 pir:C70036; capsular polysaccharide biosynthesis homolog yveN -; E=7e-12 pir:A82676; conserved hypothetical protein XF1470 [imported] -; E=2e-10 COG: TM0622; COG0438 Predicted glycosyltransferases; E=3e-23 PFAM: PF00534; Glycosyl transferases group 1; E=6.1e-38; hexosyltransferase complement(1293454..1294251) Rhodopirellula baltica SH 1 1793920 NP_864968.1 CDS RB2475 NC_005027.1 1294233 1295438 D PMID: 9097039 best DB hits: BLAST: gb:AAG55028.1; AE005248_9 (AE005248) receptor; E=4e-61 gb:AAG54539.1; AE005200_1 (AE005200) Z0271 gene product; E=1e-60 swissprot:P28917; YDCC_ECOLI H REPEAT-ASSOCIATED PROTEIN IN; E=1e-60 PFAM: PF01811; Transposase; E=1.3e-65; H repeat-containing transposase 1294233..1295438 Rhodopirellula baltica SH 1 1797077 NP_864969.1 CDS RB2477 NC_005027.1 1295422 1295793 R hypothetical protein complement(1295422..1295793) Rhodopirellula baltica SH 1 1795750 NP_864970.1 CDS RB2478 NC_005027.1 1295756 1295872 D hypothetical protein 1295756..1295872 Rhodopirellula baltica SH 1 1792799 NP_864971.1 CDS RB2479 NC_005027.1 1295862 1296683 R PMID: 8905231 best DB hits: BLAST: pir:S77382; hypothetical protein sll1456 - Synechocystis sp. (strain; E=3e-12 pir:S76193; hypothetical protein - Synechocystis sp. (strain PCC; E=2e-08 pir:H70669; hypothetical protein Rv2955c - Mycobacterium; E=4e-07 COG: sll1456; COG0500 SAM-dependent methyltransferases; E=3e-13; hypothetical protein complement(1295862..1296683) Rhodopirellula baltica SH 1 1794665 NP_864972.1 CDS RB2480 NC_005027.1 1296700 1296891 R hypothetical protein complement(1296700..1296891) Rhodopirellula baltica SH 1 1793247 NP_864973.1 CDS RB2482 NC_005027.1 1296888 1298060 R PMID: 11259647 best DB hits: BLAST: pir:E72354; probable hexosyltransferase (EC 2.4.1.-) TM0622 -; E=0.001 gb:AAD19925.1; (AF105116) glucosyl transferase; E=0.002 embl:CAB75373.1; (AL139298) transferase [Streptomyces; E=0.002 COG: TM0622; COG0438 Predicted glycosyltransferases; E=9e-05 PFAM: PF00534; Glycosyl transferases group 1; E=1e-09; hexosyltransferase complement(1296888..1298060) Rhodopirellula baltica SH 1 1793540 NP_864974.1 CDS RB2484 NC_005027.1 1298057 1299304 R PMID: 9308175 best DB hits: BLAST: gb:AAD43837.1; AF076290_7 (AF076290) glycosyltransferase; E=5e-17 gb:AAB84956.1; (AE000829) LPS biosynthesis RfbU related protein; E=3e-05 pir:H69158; LPS biosynthesis RfbU related protein - Methanobacterium; E=3e-05 COG: MTH450; COG0438 Predicted glycosyltransferases; E=3e-06 PFAM: PF00534; Glycosyl transferases group 1; E=5.8e-18; glycosyltransferase complement(1298057..1299304) Rhodopirellula baltica SH 1 1794132 NP_864975.1 CDS RB2485 NC_005027.1 1299297 1300499 R PMID: 10360571 best DB hits: BLAST: pir:E72354; probable hexosyltransferase (EC 2.4.1.-) TM0622 -; E=5e-20 swissprot:Q9R9N1; LPSE_RHIME LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS; E=4e-10 swissprot:Q9R9N0; LPSD_RHIME LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS; E=1e-09 COG: TM0622; COG0438 Predicted glycosyltransferases; E=4e-21 PFAM: PF00534; Glycosyl transferases group 1; E=1.1e-22; hexosyltransferase complement(1299297..1300499) Rhodopirellula baltica SH 1 1792109 NP_864976.1 CDS RB2487 NC_005027.1 1300487 1301380 R PMID: 11214968 best DB hits: BLAST: pir:S76193; hypothetical protein - Synechocystis sp. (strain PCC; E=0.011 gb:AAB95303.1; (AC003105) unknown protein [Arabidopsis thaliana]; E=0.023 COG: sll1530; COG0500 SAM-dependent methyltransferases; E=0.001; hypothetical protein complement(1300487..1301380) Rhodopirellula baltica SH 1 1790673 NP_864977.1 CDS RB2489 NC_005027.1 1301458 1301658 R hypothetical protein complement(1301458..1301658) Rhodopirellula baltica SH 1 1793618 NP_864978.1 CDS RB2490 NC_005027.1 1301627 1301758 R hypothetical protein complement(1301627..1301758) Rhodopirellula baltica SH 1 1790391 NP_864979.1 CDS RB2491 NC_005027.1 1301755 1302201 R best DB hits: BLAST: embl:CAB92986.1; (AL357152) hypothetical protein SCH18.03c; E=0.19; hypothetical protein complement(1301755..1302201) Rhodopirellula baltica SH 1 1792205 NP_864980.1 CDS RB2492 NC_005027.1 1302190 1302399 D hypothetical protein 1302190..1302399 Rhodopirellula baltica SH 1 1794422 NP_864981.1 CDS RB2493 NC_005027.1 1302420 1303754 R best DB hits: BLAST: pir:D69143; LPS biosynthesis RfbU related protein - Methanobacterium; E=8e-18 embl:CAB01935.1; (Z79692) ExpE4 [Sinorhizobium meliloti]; E=2e-16 embl:CAB01932.1; (Z79692) ExpE7 [Sinorhizobium meliloti]; E=4e-13 COG: MTH338; COG0438 Predicted glycosyltransferases; E=8e-19 PFAM: PF00534; Glycosyl transferases group 1; E=1.3e-20; LPS biosynthesis RfbU related protein complement(1302420..1303754) Rhodopirellula baltica SH 1 1791052 NP_864982.1 CDS RB2494 NC_005027.1 1303740 1303904 D hypothetical protein 1303740..1303904 Rhodopirellula baltica SH 1 1791663 NP_864983.1 CDS RB2495 NC_005027.1 1303912 1304043 D hypothetical protein 1303912..1304043 Rhodopirellula baltica SH 1 1794592 NP_864984.1 CDS RB2496 NC_005027.1 1304058 1304771 R hypothetical protein complement(1304058..1304771) Rhodopirellula baltica SH 1 1795645 NP_864985.1 CDS RB2497 NC_005027.1 1304778 1304906 D hypothetical protein 1304778..1304906 Rhodopirellula baltica SH 1 1795239 NP_864986.1 CDS RB2498 NC_005027.1 1304887 1305777 R PMID: 8843436 best DB hits: BLAST: embl:CAB92986.1; (AL357152) hypothetical protein SCH18.03c; E=7e-16 embl:CAB57489.1; (Y18930) hypothetical protein [Sulfolobus; E=3e-13 pir:S76193; hypothetical protein - Synechocystis sp. (strain PCC; E=1e-08 COG: sll1530; COG0500 SAM-dependent methyltransferases; E=1e-09 APE1011; COG2518 Protein-L-isoaspartate carboxylmethyltransferase; E=0.001; methyltransferase complement(1304887..1305777) Rhodopirellula baltica SH 1 1793766 NP_864987.1 CDS RB2499 NC_005027.1 1305785 1306963 R PMID: 11206551 best DB hits: BLAST: gb:AAG57095.1; AE005429_6 (AE005429) glycosyl transferase; E=1e-20 gb:AAD47915.1; AF127522_2 (AF127522) ; E=6e-18 pir:E70346; mannosyltransferase B - Aquifex aeolicus ----- gb:; E=1e-06 COG: aq_515; COG0438 Predicted glycosyltransferases; E=1e-07 PFAM: PF00534; Glycosyl transferases group 1; E=5.9e-06; glycosyl transferase complement(1305785..1306963) Rhodopirellula baltica SH 1 1791906 NP_864988.1 CDS RB2500 NC_005027.1 1306979 1307899 R PMID: 11337471 best DB hits: BLAST: gb:AAK04309.1; AE006259_3 (AE006259) UDP-glucose 4-epimerase; E=1e-23 swissprot:Q57664; GALE_METJA UDP-GLUCOSE 4-EPIMERASE; E=1e-23 gb:AAG18701.1; (AE004975) UDP-glucose 4-epimerase; GalE2; E=3e-23 COG: MJ0211; COG0451 Nucleoside-diphosphate-sugar epimerases; E=1e-24 MTH631; COG1087 UDP-glucose 4-epimerase; E=5e-20 PH0378; COG0451 Nucleoside-diphosphate-sugar epimerases; E=1e-19 PFAM: PF01073; 3-beta hydroxysteroid dehydrogenase; E=0.64 PF00106; short chain dehydrogenase; E=0.0027 PF01370; NAD dependent epimerase/dehydratase; E=4.2e-20; UDP-glucose 4-epimerase complement(1306979..1307899) Rhodopirellula baltica SH 1 1797126 NP_864989.1 CDS RB2501 NC_005027.1 1307948 1308874 R hypothetical protein complement(1307948..1308874) Rhodopirellula baltica SH 1 1795778 NP_864990.1 CDS RB2502 NC_005027.1 1308884 1309522 R PMID: 9384377 best DB hits: BLAST: swissprot:P37515; MAA_BACSU PROBABLE MALTOSE O-ACETYLTRANSFERASE; E=6e-08 pir:E82411; hexapeptide-repeat containing-acetyltransferase VCA0836; E=2e-07 swissprot:Q58464; YA64_METJA HYPOTHETICAL PROTEIN MJ1064 -----; E=4e-07 COG: BS_yyaI; COG0110 Acetyltransferases (the isoleucine patch; E=5e-09 lacA; COG0110 Acetyltransferases (the isoleucine patch superfamily); E=3e-04 BH3001; COG0110 Acetyltransferases (the isoleucine patch; E=4e-04 PFAM: PF00132; Bacterial transferase hexapeptide (f; E=0.29; maltose O-acetyltransferase complement(1308884..1309522) Rhodopirellula baltica SH 1 1791205 NP_864991.1 CDS RB2503 NC_005027.1 1309509 1311056 R PMID: 10222209 best DB hits: BLAST: ddbj:BAA77727.1; (AB008676) flippase [Escherichia coli]; E=3e-05 gb:AAG57097.1; AE005429_8 (AE005429) O antigen flippase Wzx; E=3e-05 embl:CAA64437.1; (X94981) aceE [Acetobacter xylinus]; E=0.17; flippase complement(1309509..1311056) Rhodopirellula baltica SH 1 1790855 NP_864992.1 CDS RB2505 NC_005027.1 1311059 1311307 D hypothetical protein 1311059..1311307 Rhodopirellula baltica SH 1 1792013 NP_864993.1 CDS RB2506 NC_005027.1 1311349 1311822 D hypothetical protein 1311349..1311822 Rhodopirellula baltica SH 1 1791038 NP_864994.1 CDS rfbB NC_005027.1 1311886 1313064 R PMID: 8022265 best DB hits: BLAST: gb:AAG35060.1; AF314183_2 (AF314183) dTDP-glucose-4,6-dehydratase; E=1e-110 gb:AAF33465.1; (AF233324) 89% identity with E. coli; E=1e-107 swissprot:P55294; RFBB_NEIMB DTDP-GLUCOSE 4,6-DEHYDRATASE -----; E=1e-106 COG: NMB0063; COG1088 dTDP-D-glucose 4,6-dehydratase; E=1e-107 PFAM: PF01073; 3-beta hydroxysteroid dehydro; E=0.53 PF00106; short chain dehydrogenase; E=0.073 PF01370; NAD dependent epimerase/dehyd; E=6e-141; dTDP-glucose-4,6-dehydratase complement(1311886..1313064) Rhodopirellula baltica SH 1 1796702 NP_864995.1 CDS RB2508 NC_005027.1 1313113 1313220 D hypothetical protein 1313113..1313220 Rhodopirellula baltica SH 1 1795334 NP_864996.1 CDS RB2509 NC_005027.1 1313237 1313377 D hypothetical protein 1313237..1313377 Rhodopirellula baltica SH 1 1791670 NP_864997.1 CDS RB2510 NC_005027.1 1313396 1313563 D hypothetical protein 1313396..1313563 Rhodopirellula baltica SH 1 1796613 NP_864998.1 CDS RB2511 NC_005027.1 1313530 1313667 D hypothetical protein 1313530..1313667 Rhodopirellula baltica SH 1 1790239 NP_864999.1 CDS RB2512 NC_005027.1 1313675 1314652 R PMID: 8905231 best DB hits: BLAST: gb:AAD10232.1; (U72147) GDP-D-mannose dehydratase; E=1e-88 pir:S74433; GDP-D-mannose dehydratase 1 - Synechocystis sp. (strain; E=6e-86 gb:AAD44219.1; AF143772_25 (AF143772) mdhtA [Mycobacterium avium]; E=5e-83 COG: sll1212; COG1089 GDP-D-mannose dehydratase; E=6e-87 DR0711; COG0451 Nucleoside-diphosphate-sugar epimerases; E=1e-17 Rv0112; COG1089 GDP-D-mannose dehydratase; E=2e-13 PFAM: PF01370; NAD dependent epimerase/dehydratase; E=3.5e-16; GDP-D-mannose dehydratase 1 complement(1313675..1314652) Rhodopirellula baltica SH 1 1793979 NP_865000.1 CDS RB2513 NC_005027.1 1314624 1314764 D hypothetical protein 1314624..1314764 Rhodopirellula baltica SH 1 1792657 NP_865001.1 CDS RB2514 NC_005027.1 1314954 1315145 R hypothetical protein complement(1314954..1315145) Rhodopirellula baltica SH 1 1793007 NP_865002.1 CDS RB2515 NC_005027.1 1315248 1316657 R PMID: 10984043 best DB hits: BLAST: pir:A83252; probable UDP-glucoseGDP-mannose dehydrogenase WbpA; E=1e-124 pir:H72358; lipopolysaccharide biosynthesis protein - Thermotoga; E=4e-93 pir:F71153; probable Vi polysaccharide biosynthesis protein -; E=8e-85 COG: PA3159; COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; E=1e-125 VNG0046G; COG1004 Predicted UDP-glucose 6-dehydrogenase; E=9e-24 PFAM: PF00984; UDP-glucose/GDP-mannose dehydro; E=3.9e-131; UDP-glucose/GDP-mannose dehydrogenase complement(1315248..1316657) Rhodopirellula baltica SH 1 1790704 NP_865003.1 CDS RB2516 NC_005027.1 1316669 1316860 D hypothetical protein 1316669..1316860 Rhodopirellula baltica SH 1 1792301 NP_865004.1 CDS RB2517 NC_005027.1 1316854 1317012 D hypothetical protein 1316854..1317012 Rhodopirellula baltica SH 1 1792170 NP_865005.1 CDS RB2518 NC_005027.1 1317007 1318059 R PMID: 10718197 best DB hits: BLAST: gb:AAD10232.1; (U72147) GDP-D-mannose dehydratase; E=1e-112 pir:S74433; GDP-D-mannose dehydratase 1 - Synechocystis sp. (strain; E=1e-111 gb:AAD43839.1; AF076290_9 (AF076290) GDP-D-mannose; E=1e-102 COG: sll1212; COG1089 GDP-D-mannose dehydratase; E=1e-112 Cj1319; COG0451 Nucleoside-diphosphate-sugar epimerases; E=9e-14 Rv0112; COG1089 GDP-D-mannose dehydratase; E=1e-13 PFAM: PF01370; NAD dependent epimerase/dehydratase; E=1.3e-14; GDP-mannose 4,6 dehydratase complement(1317007..1318059) Rhodopirellula baltica SH 1 1795922 NP_865006.1 CDS RB2519 NC_005027.1 1318116 1318340 D hypothetical protein 1318116..1318340 Rhodopirellula baltica SH 1 1796678 NP_865007.1 CDS RB2520 NC_005027.1 1318375 1318581 D hypothetical protein 1318375..1318581 Rhodopirellula baltica SH 1 1790930 NP_865008.1 CDS RB2521 NC_005027.1 1318633 1319577 R PMID: 9862812 best DB hits: BLAST: pdb:1BWS; A Chain A, Crystal Structure Of; E=8e-90 gb:AAG57112.1; AE005431_4 (AE005431) nucleotide; E=2e-89 pir:D55239; cpsB 5'-region hypothetical protein 2 - Escherichia coli; E=2e-89 COG: wcaG; COG0451 Nucleoside-diphosphate-sugar epimerases; E=2e-90 Cj1131c; COG1087 UDP-glucose 4-epimerase; E=2e-11 slr0583; COG0451 Nucleoside-diphosphate-sugar epimerases; E=3e-11 PFAM: PF01370; NAD dependent epimerase/dehydratase; E=0.071; GDP-fucose synthetase complement(1318633..1319577) Rhodopirellula baltica SH 1 1790468 NP_865009.1 CDS RB2524 NC_005027.1 1319449 1319796 D hypothetical protein 1319449..1319796 Rhodopirellula baltica SH 1 1796707 NP_865010.1 CDS RB2525 NC_005027.1 1320054 1320284 R best DB hits: BLAST: gb:AAB99952.1; (AF035443) wee1 homolog [Xenopus laevis]; E=0.31; hypothetical protein complement(1320054..1320284) Rhodopirellula baltica SH 1 1794872 NP_865011.1 CDS RB2529 NC_005027.1 1320541 1321128 D signal peptide 1320541..1321128 Rhodopirellula baltica SH 1 1794886 NP_865012.1 CDS RB2530 NC_005027.1 1321125 1322540 D best DB hits: BLAST: gb:AAG19823.1; (AE005067) Vng1537c [Halobacterium sp. NRC-1]; E=4e-27 pir:E75148; hypothetical protein PAB2116 - Pyrococcus abyssi (strain; E=9e-25 gb:AAG20566.1; (AE005127) Vng2502c [Halobacterium sp. NRC-1]; E=8e-24 COG: VNG1537C; COG1078 HD superfamily phosphohydrolases; E=4e-28; oxidoreductase 1321125..1322540 Rhodopirellula baltica SH 1 1794138 NP_865013.1 CDS nagB NC_005027.1 1322563 1323318 D PMID: 7683645 PMID: 3284790 best DB hits: BLAST: swissprot:O31458; YBFT_BACSU HYPOTHETICAL 27.3 KD PROTEIN IN; E=2e-55 ddbj:BAB04139.1; (AP001508) N-acetylglucosamine-6-phosphate; E=4e-54 swissprot:O35000; NAGB_BACSU GLUCOSAMINE-6-PHOSPHATE ISOMERASE; E=8e-53 COG: BS_ybfT; COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate; E=2e-56 PFAM: PF01182; Glucosamine-6-phosphate isome; E=7.9e-96; glucosamine-6-phosphate isomerase 1322563..1323318 Rhodopirellula baltica SH 1 1792822 NP_865014.1 CDS RB2533 NC_005027.1 1323315 1324823 D PMID: 8843436 best DB hits: BLAST: embl:CAB88464.1; (AL353815) integral membrane protein; E=2e-07 pir:S74882; hypothetical protein sll1151 - Synechocystis sp. (strain; E=3e-07 gb:AAB90453.1; (AE001050) conserved hypothetical protein; E=1e-04 COG: sll1151; COG1808 Uncharacterized ACR; E=3e-08; hypothetical protein 1323315..1324823 Rhodopirellula baltica SH 1 1793307 NP_865015.1 CDS RB2534 NC_005027.1 1324897 1325199 D hypothetical protein 1324897..1325199 Rhodopirellula baltica SH 1 1796640 NP_865016.1 CDS RB2535 NC_005027.1 1325120 1326238 R PMID: 1304369 PMID: 11258796 best DB hits: BLAST: pir:E82497; ribose operon repressor VCA0132 [imported] - Vibrio; E=3e-40 gb:AAA62106.1; (L10328) rbs repressor [Escherichia coli]; E=7e-40 swissprot:P25551; RBSR_ECOLI RIBOSE OPERON REPRESSOR -----; E=9e-40 COG: VCA0132; COG1609 Transcriptional regulators; E=2e-41 PFAM: PF01047; MarR family; E=0.088 PF02796; Helix-turn-helix domain of re; E=0.72 PF00356; Bacterial regulatory proteins; E=2e-09; ribose operon repressor complement(1325120..1326238) Rhodopirellula baltica SH 1 1795713 NP_865017.1 CDS RB2537 NC_005027.1 1325997 1326602 D hypothetical protein 1325997..1326602 Rhodopirellula baltica SH 1 1795738 NP_865018.1 CDS RB2543 NC_005027.1 1326685 1328760 D PMID: 10871362 best DB hits: BLAST: swissprot:Q9Z8M3; RS1_CHLPN 30S RIBOSOMAL PROTEIN S1 -----; E=1e-139 swissprot:O84100; RS1_CHLTR 30S RIBOSOMAL PROTEIN S1 -----; E=1e-138 pir:A81710; ribosomal protein S1 TC0373 [imported] - Chlamydia; E=1e-137 COG: CPn0315; COG0539 Ribosomal protein S1; E=1e-140 PFAM: PF00575; S1 RNA binding domain; E=0.0018 PF01479; S4 domain; E=0.83 PF00575; S1 RNA binding domain; E=1.4e-24; 30S ribosomal protein S1 1326685..1328760 Rhodopirellula baltica SH 1 1794251 NP_865019.1 CDS RB2545 NC_005027.1 1328773 1328931 R hypothetical protein complement(1328773..1328931) Rhodopirellula baltica SH 1 1793902 NP_865020.1 CDS RB2547 NC_005027.1 1328986 1330332 D PMID: 11214968 best DB hits: BLAST: gb:AAG20070.1; (AE005086) Vng1869c [Halobacterium sp. NRC-1]; E=0.18; signal peptide 1328986..1330332 Rhodopirellula baltica SH 1 1791263 NP_865021.1 CDS phyB NC_005027.1 1330329 1332260 D PMID: 11759840 best DB hits: BLAST: swissprot:Q9R6X3; PHYB_ANASP CYANOBACTERIAL PHYTOCHROME B -----; E=3e-32 gb:AAB89763.1; (AE001000) signal-transducing histidine kinase; E=4e-32 pir:E75617; sensor histidine kinase - Deinococcus radiodurans; E=6e-30 COG: DRA0205; COG0642 Sensory transduction histidine kinases; E=6e-31 PFAM: PF00672; HAMP domain; E=0.0036 PF00512; His Kinase A (phosphoacceptor) doma; E=7.2e-08 PF02518; Histidine kinase-, DNA gyrase B-, p; E=2e-35; phytochrome B 1330329..1332260 Rhodopirellula baltica SH 1 1792782 NP_865022.1 CDS RB2550 NC_005027.1 1332257 1332721 D PMID: 9278513 best DB hits: BLAST: pir:B69158; sensory transduction regulatory protein -; E=8e-11 swissprot:Q55169; RCP1_SYNY3 RESPONSE REGULATOR RCP1 -----; E=1e-09 gb:AAB89775.1; (AE001001) response regulator [Archaeoglobus; E=2e-08 COG: MTH445; COG0784 CheY-like receiver domains; E=8e-12 PFAM: PF00072; Response regulator receiver doma; E=8.1e-11; response regulator 1332257..1332721 Rhodopirellula baltica SH 1 1793721 NP_865023.1 CDS RB2551 NC_005027.1 1332734 1332889 D hypothetical protein 1332734..1332889 Rhodopirellula baltica SH 1 1791412 NP_865024.1 CDS argC NC_005027.1 1332924 1333964 D PMID: 10360571 best DB hits: BLAST: swissprot:Q9Z4S2; ARGC_THENE N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE; E=4e-69 swissprot:Q9X2A2; ARGC_THEMA N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE; E=5e-69 pir:E83562; N-acetyl-gamma-glutamyl-phosphate reductase PA0662; E=1e-67 COG: TM1782; COG0002 Acetylglutamate semialdehyde dehydrogenase; E=4e-70 PFAM: PF01408; Oxidoreductase, NAD-bi; E=0.016 PF01118; Semialdehyde dehydrogenase, N; E=8.3e-31 PF02774; Semialdehyde dehydrogenase, d; E=2.8e-27; N-acetyl-gamma-glutamyl-phosphate reductase 1332924..1333964 Rhodopirellula baltica SH 1 1794430 NP_865025.1 CDS RB2553 NC_005027.1 1334003 1335400 D best DB hits: BLAST: pir:T36892; hypothetical protein SCI51.29 - Streptomyces coelicolor; E=6e-28 pir:G72244; hypothetical protein - Thermotoga maritima (strain MSB8); E=3e-15 embl:CAC12021.1; (AL445065) conserved hypothetical protein; E=1e-07; phosphatase 1334003..1335400 Rhodopirellula baltica SH 1 1790966 NP_865026.1 CDS RB2556 NC_005027.1 1335438 1335620 R hypothetical protein complement(1335438..1335620) Rhodopirellula baltica SH 1 1796484 NP_865027.1 CDS RB2557 NC_005027.1 1335672 1335857 D hypothetical protein 1335672..1335857 Rhodopirellula baltica SH 1 1790062 NP_865028.1 CDS RB2558 NC_005027.1 1335881 1336927 D PMID: 9023666 best DB hits: BLAST: swissprot:P55632; Y4QK_RHISN INTEGRASERECOMBINASE Y4QK; E=3e-39 swissprot:P55429; Y4EF_RHISN INTEGRASERECOMBINASE Y4EF; E=1e-32 prf:2115270D; integrase [Weeksella zoohelcum]; E=6e-23 COG: PAB0255; COG0582 Integrase; E=1e-20 PFAM: PF02899; Phage integrase, N-terminal S; E=0.3 PF00589; Phage integrase; E=8e-31; integrase 1335881..1336927 Rhodopirellula baltica SH 1 1796811 NP_865029.1 CDS RB2559 NC_005027.1 1336942 1338090 D PMID: 1646375 best DB hits: BLAST: prf:2115270C; transposase [Weeksella zoohelcum]; E=1e-33 swissprot:P55631; Y4QJ_RHISN TRANSPOSASE Y4QJ -----; E=1e-32 swissprot:P24607; T801_PSESH TRANSPOSASE FOR INSERTION SEQUENCE; E=2e-09 PFAM: PF01096; Transcription factor S-II (TFIIS); E=0.19; transposase 1336942..1338090 Rhodopirellula baltica SH 1 1792199 NP_865030.1 CDS RB2560 NC_005027.1 1338094 1338390 D hypothetical protein 1338094..1338390 Rhodopirellula baltica SH 1 1789954 NP_865031.1 CDS RB2562 NC_005027.1 1338453 1339220 R hypothetical protein complement(1338453..1339220) Rhodopirellula baltica SH 1 1791721 NP_865032.1 CDS ldh NC_005027.1 1339217 1340152 R PMID: 3122782 PMID: 3118900 best DB hits: BLAST: swissprot:P00345; LDH_BACME L-LACTATE DEHYDROGENASE ----- pir:; E=3e-49 swissprot:P20619; LDHX_BACPS L-LACTATE DEHYDROGENASE X -----; E=6e-47 swissprot:P16115; LDH_THEMA L-LACTATE DEHYDROGENASE ----- pir:; E=3e-46 COG: TM1867; COG0039 Malate/lactate dehydrogenases; E=2e-47 PFAM: PF00056; lactate/malate dehydrogenase, NA; E=6.7e-46 PF02866; lactate/malate dehydrogenase, al; E=2.4e-36; L-lactate dehydrogenase complement(1339217..1340152) Rhodopirellula baltica SH 1 1793947 NP_865033.1 CDS RB2568 NC_005027.1 1340281 1341144 R best DB hits: BLAST: pir:C75206; L-fuculose-phosphate aldolase (EC 4.1.2.17) - Pyrococcus; E=3e-18 pir:E71241; L-fuculose-phosphate aldolase (EC 4.1.2.17) - Pyrococcus; E=5e-18 gb:AAK03448.1; (AE006174) unknown [Pasteurella multocida]; E=2e-16 COG: PAB0117; COG0235 Ribulose-5-phosphate 4-epimerase and related; E=2e-19 PFAM: PF00596; Class II Aldolase and Adducin N-t; E=2.4e-21; L-fuculose-phosphate aldolase complement(1340281..1341144) Rhodopirellula baltica SH 1 1790356 NP_865034.1 CDS RB2571 NC_005027.1 1341231 1341536 R PMID: 8491708 best DB hits: BLAST: swissprot:Q03512; CCML_SYNP7 CARBON DIOXIDE CONCENTRATING; E=1e-04 swissprot:P41792; EUTN_SALTY ETHANOLAMINE UTILIZATION PROTEIN; E=8e-04 swissprot:P77633; EUTN_ECOLI ETHANOLAMINE UTILIZATION PROTEIN; E=0.007; carbon dioxide concentrating mechanism protein CcmL complement(1341231..1341536) Rhodopirellula baltica SH 1 1793627 NP_865035.1 CDS RB2574 NC_005027.1 1341533 1342282 R hypothetical protein complement(1341533..1342282) Rhodopirellula baltica SH 1 1796620 NP_865036.1 CDS RB2577 NC_005027.1 1342305 1342592 R PMID: 11206551 best DB hits: BLAST: swissprot:P77633; EUTN_ECOLI ETHANOLAMINE UTILIZATION PROTEIN; E=0.005 gb:AAG57565.1; AE005474_13 (AE005474) detox protein [Escherichia; E=0.005 swissprot:P41792; EUTN_SALTY ETHANOLAMINE UTILIZATION PROTEIN; E=0.008; ethanolamine utilization protein EutN complement(1342305..1342592) Rhodopirellula baltica SH 1 1791659 NP_865037.1 CDS eutE NC_005027.1 1342595 1344019 R PMID: 11677609 best DB hits: BLAST: swissprot:P41793; EUTE_SALTY ETHANOLAMINE UTILIZATION PROTEIN EUTE; E=5e-84 gb:AAG57564.1; AE005474_12 (AE005474) ethanolamine utilization; E=1e-83 swissprot:P77445; EUTE_ECOLI ETHANOLAMINE UTILIZATION PROTEIN EUTE; E=5e-83 COG: eutE; COG1012 NAD-dependent aldehyde dehydrogenases; E=5e-84 PFAM: PF00171; Aldehyde dehydrogenase; E=0.21; ethanolamine utilization protein EutE complement(1342595..1344019) Rhodopirellula baltica SH 1 1794113 NP_865038.1 CDS eutN NC_005027.1 1344073 1344465 R PMID: 11677609 best DB hits: BLAST: swissprot:P41792; EUTN_SALTY ETHANOLAMINE UTILIZATION PROTEIN EUTN; E=4e-09 swissprot:P77633; EUTN_ECOLI ETHANOLAMINE UTILIZATION PROTEIN EUTN; E=5e-09 gb:AAD39013.1; (AF026270) PduN [Salmonella enterica serovar; E=5e-09; ethanolamine utilization protein EutN complement(1344073..1344465) Rhodopirellula baltica SH 1 1790907 NP_865039.1 CDS ackA NC_005027.1 1344446 1345681 R PMID: 8226682 PMID: 8702268 best DB hits: BLAST: ddbj:BAB06911.1; (AP001518) acetate kinase [Bacillus halodurans]; E=4e-75 swissprot:P37877; ACKA_BACSU ACETATE KINASE (ACETOKINASE) -----; E=2e-74 swissprot:P71104; ACKA_CLOAB ACETATE KINASE (ACETOKINASE) -----; E=6e-70 COG: BH3192; COG0282 Acetate kinase; E=3e-76 PFAM: PF00871; Acetokinase; E=2.5e-119; acetate kinase complement(1344446..1345681) Rhodopirellula baltica SH 1 1792617 NP_865040.1 CDS RB2585 NC_005027.1 1345766 1346035 R best DB hits: PFAM: PF00936; Bacterial microcompartments pr; E=1.2e-26; hypothetical protein complement(1345766..1346035) Rhodopirellula baltica SH 1 1794390 NP_865041.1 CDS eutM NC_005027.1 1346106 1346402 R PMID: 7868611 best DB hits: BLAST: swissprot:P37448; PDUA_SALTY PROPANEDIOL UTILIZATION PROTEIN; E=2e-11 gb:AAD39009.1; (AF026270) PduJ [Salmonella enterica serovar; E=2e-11 gb:AAB84107.2; (AF026270) PduA [Salmonella enterica serovar; E=2e-11 PFAM: PF00936; Bacterial microcompartments pr; E=1.2e-43; ethanolamine utilization protein EutM complement(1346106..1346402) Rhodopirellula baltica SH 1 1793119 NP_865042.1 CDS RB2587 NC_005027.1 1346386 1346535 R hypothetical protein complement(1346386..1346535) Rhodopirellula baltica SH 1 1793228 NP_865043.1 CDS RB2588 NC_005027.1 1346519 1347244 R PMID: 10360571 best DB hits: BLAST: pir:E72385; hypothetical protein TM0375 - Thermotoga maritima; E=7e-42 gb:AAD39011.1; (AF026270) PduL [Salmonella enterica serovar; E=3e-32; transcriptional regulator complement(1346519..1347244) Rhodopirellula baltica SH 1 1792225 NP_865044.1 CDS RB2590 NC_005027.1 1347241 1348146 R PMID: 10931310 best DB hits: BLAST: embl:CAB96011.1; (AL360055) transcriptional regulatory; E=3e-28 embl:CAC21630.1; (AL512667) deoR-family transcriptional; E=6e-25 ddbj:BAB05272.1; (AP001512) transcriptional regulator (DeoR; E=1e-24 COG: BH1553; COG1349 Transcriptional regulators of sugar metabolism; E=1e-25 PFAM: PF00392; Bacterial regulatory proteins, gnt; E=0.00039 PF01022; Bacterial regulatory protein, arsR; E=0.028 PF00455; Bacterial regulatory proteins, deo; E=2.1e-68; aga operon transcriptional repressor complement(1347241..1348146) Rhodopirellula baltica SH 1 1791040 NP_865045.1 CDS RB2591 NC_005027.1 1348112 1348249 R hypothetical protein complement(1348112..1348249) Rhodopirellula baltica SH 1 1792790 NP_865046.1 CDS RB2592 NC_005027.1 1348333 1348926 R hypothetical protein complement(1348333..1348926) Rhodopirellula baltica SH 1 1790120 NP_865047.1 CDS RB2593 NC_005027.1 1349011 1350099 D PMID: 20196006 best DB hits: BLAST: swissprot:P29939; YCB6_PSEDE HYPOTHETICAL 15.0 KD PROTEIN IN COBO; E=0.55 PFAM: PF00892; Integral membrane protein DUF6; E=7.1e-05; hypothetical protein 1349011..1350099 Rhodopirellula baltica SH 1 1796994 NP_865048.1 CDS RB2596 NC_005027.1 1350137 1353130 D best DB hits: BLAST: gb:AAC98350.1; (AF075462) ADP-ribosylation factor-directed GTPase; E=0.22 gb:AAF55676.2; (AE003726) CG7240 gene product [Drosophila; E=0.39; ADP-ribosylation factor-directed GTPase activating protein isoform b 1350137..1353130 Rhodopirellula baltica SH 1 1792880 NP_865049.1 CDS RB2602 NC_005027.1 1353165 1353377 D hypothetical protein 1353165..1353377 Rhodopirellula baltica SH 1 1791669 NP_865050.1 CDS RB2603 NC_005027.1 1353170 1353277 R hypothetical protein complement(1353170..1353277) Rhodopirellula baltica SH 1 1791379 NP_865051.1 CDS RB2604 NC_005027.1 1353293 1353445 R hypothetical protein complement(1353293..1353445) Rhodopirellula baltica SH 1 1791523 NP_865052.1 CDS RB2605 NC_005027.1 1353544 1358364 R PMID: 2116366 best DB hits: BLAST: pdb:2AZA; A Chain A, Azurin (Oxidized) ----- pdb: 2AZA B Chain; E=0.012 swissprot:P34097; AZUR_PSEPU AZURIN ----- pir: A37338 azurin -; E=0.024 pdb:1NZR; A Chain A, Azurin Mutant With Trp 48 Replaced By Met; E=0.033 COG: PA4922; COG3241 Azurin; E=0.008 PFAM: PF00127; Copper binding proteins, plasto; E=5e-06 PF00034; Cytochrome c; E=0.0036; azurin precursor complement(1353544..1358364) Rhodopirellula baltica SH 1 1791676 NP_865053.1 CDS RB2612 NC_005027.1 1358405 1358638 D hypothetical protein 1358405..1358638 Rhodopirellula baltica SH 1 1792528 NP_865054.1 CDS RB2613 NC_005027.1 1358580 1360514 R PMID: 9634230 best DB hits: BLAST: pir:F70837; probable sulfatase (EC 3.1.6.-) atsG - Mycobacterium; E=3e-23 gb:AAG17207.1; AF217204_1 (AF217204) heparan sulfate sulfamidase; E=3e-17 gb:AAG41945.1; AF304053_1 (AF304053) heparan N-sulfatase [Mus; E=2e-16 COG: Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=3e-24 TM1703; COG1368 Phosphoglycerol transferase and related proteins,; E=4e-04 ydeN; COG3119 Arylsulfatase A and related enzymes; E=6e-04 PFAM: PF00884; Sulfatase; E=9.8e-18; sulfatase atsG complement(1358580..1360514) Rhodopirellula baltica SH 1 1795725 NP_865055.1 CDS RB2618 NC_005027.1 1360632 1360868 R hypothetical protein complement(1360632..1360868) Rhodopirellula baltica SH 1 1790990 NP_865056.1 CDS RB2619 NC_005027.1 1360823 1361656 D PMID: 10747959 best DB hits: BLAST: swissprot:P37545; YABD_BACSU DEOXYRIBONUCLEASE YABD; E=2e-45 pir:H72349; conserved hypothetical protein - Thermotoga maritima; E=1e-37 ddbj:BAB03773.1; (AP001507) BH0054~unknown conserved protein; E=6e-37 COG: BS_yabD; COG0084 Mg-dependent DNase; E=2e-46 PFAM: PF01026; TatD related DNase; E=1.8e-81; deoxyribonuclease yabD 1360823..1361656 Rhodopirellula baltica SH 1 1796834 NP_865057.1 CDS RB2620 NC_005027.1 1361729 1361956 D hypothetical protein 1361729..1361956 Rhodopirellula baltica SH 1 1792003 NP_865058.1 CDS RB2621 NC_005027.1 1361887 1362576 D PMID: 10629178 PMID: 3537313 PMID: 9878437 best DB hits: BLAST: gb:AAF15533.1; AF196490_3 (AF196490) phosphate regulon response; E=2e-35 swissprot:Q52990; PHOB_RHIME PHOSPHATE REGULON TRANSCRIPTIONAL; E=2e-31 embl:CAA11074.1; (AJ223073) phosphate regulatory protein; E=9e-31 COG: PA5360; COG0745 Response regulators consisting of a CheY-like; E=5e-31 phoB; COG0745 Response regulators consisting of a CheY-like receiver; E=7e-31 TM1655; COG0745 Response regulators consisting of a CheY-like; E=1e-30 PFAM: PF00072; Response regulator receiver doma; E=2.5e-28 PF00486; Transcriptional regulatory prote; E=1.2e-24; phosphate regulon response regulator PhoB 1361887..1362576 Rhodopirellula baltica SH 1 1790825 NP_865059.1 CDS RB2623 NC_005027.1 1362584 1362730 R hypothetical protein complement(1362584..1362730) Rhodopirellula baltica SH 1 1795440 NP_865060.1 CDS RB2624 NC_005027.1 1362723 1363412 D signal peptide 1362723..1363412 Rhodopirellula baltica SH 1 1795514 NP_865061.1 CDS RB2626 NC_005027.1 1363440 1364447 R PMID: 11214968 best DB hits: BLAST: pir:B72316; conserved hypothetical protein - Thermotoga maritima; E=0.001 pir:T50902; Mg protoporphyrin IX monomethyl ester oxidative cyclase; E=0.011 embl:CAA70016.1; (Y08763) methyltransferase [Streptomyces; E=0.013 COG: TM0938; COG0500 SAM-dependent methyltransferases; E=1e-04; hypothetical protein complement(1363440..1364447) Rhodopirellula baltica SH 1 1792796 NP_865062.1 CDS RB2627 NC_005027.1 1364551 1365579 D PMID: 8557349 best DB hits: BLAST: swissprot:O06822; G3P_MYCTU GLYCERALDEHYDE 3-PHOSPHATE; E=2e-99 swissprot:P46795; G3P_BORBU GLYCERALDEHYDE 3-PHOSPHATE; E=2e-99 swissprot:P46713; G3P_MYCLE GLYCERALDEHYDE 3-PHOSPHATE; E=6e-99 COG: Rv1436; COG0057 Glyceraldehyde-3-phosphate; E=1e-101 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=0.11 PF00044; Glyceraldehyde 3-phosphate dehyd; E=2.2e-118 PF02800; Glyceraldehyde 3-phosphate dehyd; E=5.5e-109; glyceraldehyde 3-phosphate dehydrogenase 1364551..1365579 Rhodopirellula baltica SH 1 1791836 NP_865063.1 CDS RB2628 NC_005027.1 1365576 1365707 R hypothetical protein complement(1365576..1365707) Rhodopirellula baltica SH 1 1791900 NP_865064.1 CDS obgE NC_005027.1 1365746 1366993 D essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 1365746..1366993 Rhodopirellula baltica SH 1 1793340 NP_865065.1 CDS RB2632 NC_005027.1 1367010 1367897 D PMID: 7601846 best DB hits: BLAST: pir:T36391; hypothetical protein SCE94.31c - Streptomyces coelicolor; E=4e-11 pir:S75559; hypothetical protein slr0812 - Synechocystis sp. (strain; E=3e-10 gb:AAG28531.1; AF198621_2 (AF198621) 32 kDa replication; E=7e-10 COG: slr0812; COG1521 transcriptional regulators, homologs of; E=3e-11 TM0883; COG1521 transcriptional regulators, homologs of Bvg; E=7e-09 NMB2075_2; COG1521 transcriptional regulators, homologs of; E=6e-07; hypothetical protein 1367010..1367897 Rhodopirellula baltica SH 1 1796789 NP_865066.1 CDS RB2634 NC_005027.1 1367907 1368080 R hypothetical protein complement(1367907..1368080) Rhodopirellula baltica SH 1 1794268 NP_865067.1 CDS RB2636 NC_005027.1 1368100 1368450 R hypothetical protein complement(1368100..1368450) Rhodopirellula baltica SH 1 1794681 NP_865068.1 CDS rnhA NC_005027.1 1368449 1369171 D PMID: 1650910 best DB hits: BLAST: pir:A83418; ribonuclease H PA1815 [imported] - Pseudomonas; E=1e-04 pdb:1RBR; Ribonuclease H (E.C.3.1.26.4) Mutant With His 62; E=2e-04 swissprot:P23329; RNH_SALTY RIBONUCLEASE HI (RNASE HI); E=5e-04 COG: PA1815; COG0328 Ribonuclease HI; E=1e-05; ribonuclease HI 1368449..1369171 Rhodopirellula baltica SH 1 1792382 NP_865069.1 CDS glgB NC_005027.1 1369232 1371442 D catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching enzyme 1369232..1371442 Rhodopirellula baltica SH 1 1793727 NP_865070.1 CDS RB2640 NC_005027.1 1371720 1372769 R signal peptide complement(1371720..1372769) Rhodopirellula baltica SH 1 1791618 NP_865071.1 CDS RB2642 NC_005027.1 1372782 1373147 R NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase complement(1372782..1373147) Rhodopirellula baltica SH 1 1796617 NP_865072.1 CDS RB2645 NC_005027.1 1373182 1373955 D PMID: 11016950 best DB hits: BLAST: gb:AAG20939.1; (AE005160) Vng6305c [Halobacterium sp. NRC-1]; E=3e-42 embl:CAC23039.1; (AL512964) homolog of ORF_f223 [Escherichia; E=2e-16 pir:C82625; conserved hypothetical protein XF1894 [imported] -; E=1e-15 COG: XF1894; COG0602 Organic radical activating enzymes; E=1e-16 PAB2273; COG2896 Molybdenum cofactor biosynthesis enzyme; E=4e-05 MJ1645; COG0602 Organic radical activating enzymes; E=3e-04 PFAM: PF02143; Radical activating enzyme; E=1e-06 PF01444; moaA / nifB / pqqE family; E=0.0011; radical activating enzyme 1373182..1373955 Rhodopirellula baltica SH 1 1791397 NP_865073.1 CDS RB2647 NC_005027.1 1374116 1374889 R PMID: 12024217; signal peptide complement(1374116..1374889) Rhodopirellula baltica SH 1 1790167 NP_865074.1 CDS RB2649 NC_005027.1 1374987 1375148 D hypothetical protein 1374987..1375148 Rhodopirellula baltica SH 1 1795571 NP_865075.1 CDS RB2651 NC_005027.1 1375141 1377528 R PMID: 11759840 best DB hits: BLAST: pir:S77541; hypothetical protein slr1207 - Synechocystis sp. (strain; E=0.007 COG: slr1207; COG0845 Membrane-fusion protein; E=7e-04 PFAM: PF02163; Sterol-regulatory element bindi; E=0.79 PF00364; Biotin-requiring enzyme; E=0.046; hypothetical protein complement(1375141..1377528) Rhodopirellula baltica SH 1 1797041 NP_865076.1 CDS RB2654 NC_005027.1 1377489 1379618 R PMID: 11206551 best DB hits: BLAST: gb:AAG54840.1; AE005229_3 (AE005229) membrane spanning; E=0.072 gb:AAG09745.1; AF232237_3 (AF232237) membrane fusion protein; E=0.23 pir:E70342; cation efflux system (czcB-like) - Aquifex aeolicus; E=0.43 PFAM: PF00364; Biotin-requiring enzyme; E=0.0014 PF00529; HlyD family secretion protein; E=2.9e-05; membrane spanning export protein complement(1377489..1379618) Rhodopirellula baltica SH 1 1794501 NP_865077.1 CDS RB2656 NC_005027.1 1379700 1380779 R best DB hits: BLAST: pir:T35248; probable oxidoreductase - Streptomyces coelicolor; E=1e-40 gb:AAK01518.1; (AF241171) oxidoreductase [Pseudomonas; E=0.001 swissprot:P73069; Y48L_SYNY3 YCF48-LIKE PROTEIN ----- pir:; E=0.003 PFAM: PF02012; BNR repeat; E=0.039; oxidoreductase complement(1379700..1380779) Rhodopirellula baltica SH 1 1796637 NP_865078.2 CDS xylA NC_005027.1 1380946 1382265 R catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase complement(1380946..1382265) Rhodopirellula baltica SH 1 1792675 NP_865079.1 CDS RB2659 NC_005027.1 1382315 1382557 D hypothetical protein 1382315..1382557 Rhodopirellula baltica SH 1 1791785 NP_865080.1 CDS RB2660 NC_005027.1 1382326 1382661 R hypothetical protein complement(1382326..1382661) Rhodopirellula baltica SH 1 1790472 NP_865081.1 CDS murB NC_005027.1 1382713 1383747 D PMID: 1387377 PMID: 2556375 PMID: 2556376 PMID: 7590298 best DB hits: BLAST: gb:AAK05260.1; AE006348_5 (AE006348); E=3e-22 swissprot:P18579; MURB_BACSU UDP-N-ACETYLENOLPYRUVOYLGLUCOSAMINE; E=2e-19 ddbj:BAB06283.1; (AP001515) UDP-N-acetylenolpyruvoylglucosamine; E=6e-17 COG: BS_murB; COG0812 UDP-N-acetylmuramate dehydrogenase; E=2e-20 PFAM: PF02215; UDP-N-acetylenolpyruvoylglucos; E=1.5e-34 PF02873; UDP-N-acetylenolpyruvoylglucos; E=0.3; UDP-N-acetylenolpyruvoylglucosamine reductase 1382713..1383747 Rhodopirellula baltica SH 1 1792350 NP_865082.1 CDS RB2662 NC_005027.1 1383758 1384642 D signal peptide 1383758..1384642 Rhodopirellula baltica SH 1 1789989 NP_865083.1 CDS RB2663 NC_005027.1 1384715 1386346 D PMID: 11181566 best DB hits: BLAST: gb:AAG41945.1; AF304053_1 (AF304053) heparan N-sulfatase [Mus; E=5e-36 gb:AAG41946.1; AF304054_1 (AF304054) mutant heparan N-sulfatase; E=2e-35 gb:AAF29467.1; (AF156255) N-sulfoglucosamine sulfohydrolase [Mus; E=1e-34 COG: Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=2e-27 VC2041; COG3083 Predicted hydrolase of alkaline phosphatase; E=0.003 aslA; COG3119 Arylsulfatase A and related enzymes; E=0.005 PFAM: PF00884; Sulfatase; E=3.3e-16 PF01974; tRNA intron endonuclease, catal; E=0.44 PF00884; Sulfatase; E=8.6e-21; heparan N-sulfatase 1384715..1386346 Rhodopirellula baltica SH 1 1790290 NP_865084.1 CDS RB2665 NC_005027.1 1386348 1386527 D hypothetical protein 1386348..1386527 Rhodopirellula baltica SH 1 1791128 NP_865085.1 CDS RB2667 NC_005027.1 1386488 1387198 R hypothetical protein complement(1386488..1387198) Rhodopirellula baltica SH 1 1794702 NP_865086.1 CDS RB2669 NC_005027.1 1387021 1387995 R hypothetical protein complement(1387021..1387995) Rhodopirellula baltica SH 1 1791625 NP_865087.1 CDS RB2671 NC_005027.1 1388043 1389056 R PMID: 7482699 best DB hits: BLAST: ddbj:BAA91718.1; (AK001486) unnamed protein product [Homo; E=0.007 ddbj:BAB08640.1; (AB009048) gene_id:K15E6.5~unknown protein; E=0.012 pir:T00095; hypothetical protein KIAA0470 - human ----- ddbj:; E=0.052 PFAM: PF00498; FHA domain; E=1.8e-12; hypothetical protein complement(1388043..1389056) Rhodopirellula baltica SH 1 1795837 NP_865088.1 CDS RB2673 NC_005027.1 1389086 1390600 R PMID: 1835671 best DB hits: BLAST: pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=3e-43 ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=7e-43 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=5e-41 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=3e-44 PFAM: PF00069; Protein kinase domain; E=6e-61; serine/threonine protein kinase complement(1389086..1390600) Rhodopirellula baltica SH 1 1791153 NP_865089.1 CDS RB2675 NC_005027.1 1390637 1390762 R hypothetical protein complement(1390637..1390762) Rhodopirellula baltica SH 1 1791718 NP_865090.1 CDS truA NC_005027.1 1390759 1391589 R PMID: 10192928 PMID: 3276686 best DB hits: BLAST: swissprot:Q9Z9J0; TRUA_BACHD TRNA PSEUDOURIDINE SYNTHASE A; E=6e-39 gb:AAK04584.1; AE006284_2 (AE006284) tRNA pseudouridine synthase A; E=5e-38 swissprot:O84469; TRUA_CHLTR TRNA PSEUDOURIDINE SYNTHASE A; E=1e-37 COG: BH0167; COG0101 Pseudouridylate synthase (tRNA psi55); E=6e-40 PFAM: PF01416; tRNA pseudouridine synthase; E=5.6e-49; tRNA pseudouridine synthase A complement(1390759..1391589) Rhodopirellula baltica SH 1 1794476 NP_865091.1 CDS RB2679 NC_005027.1 1391557 1392078 D best DB hits: PFAM: PF01982; Domain of unknown function DUF120; E=0.28; hypothetical protein 1391557..1392078 Rhodopirellula baltica SH 1 1794707 NP_865092.1 CDS RB2680 NC_005027.1 1392163 1393566 R PMID: 11953415 best DB hits: BLAST: gb:AAC45602.1; (U75949) suppressor for copper-sensitivity C; E=0.011 pir:S75747; hypothetical protein slr0565 - Synechocystis sp.; E=0.032 ddbj:BAA20493.1; (AB004696) 27kDa outer membrane protein; E=0.11; suppressor for copper-sensitivity C complement(1392163..1393566) Rhodopirellula baltica SH 1 1790476 NP_865093.1 CDS RB2682 NC_005027.1 1393530 1393781 R hypothetical protein complement(1393530..1393781) Rhodopirellula baltica SH 1 1796195 NP_865094.1 CDS RB2683 NC_005027.1 1393591 1393797 D hypothetical protein 1393591..1393797 Rhodopirellula baltica SH 1 1791406 NP_865095.1 CDS araC NC_005027.1 1393950 1394714 R PMID: 3902795 best DB hits: BLAST: pir:C83489; probable transcriptional regulator PA1261 [imported] -; E=2e-26 pir:D69749; transcriptional regulator AraCXylS family homolog ybfI -; E=2e-11 pir:F82380; transcriptional regulator AraCXylS family VCA1074; E=4e-11 COG: PA1261; COG2207 AraC-type DNA-binding domain-containing proteins; E=2e-27 BS_adaA; COG2169 Adenosine deaminase; E=3e-10 BH3842_2; COG2207 AraC-type DNA-binding domain-containing proteins; E=6e-10 PFAM: PF00165; Bacterial regulatory helix-turn-heli; E=5.4e-23; transcriptional regulator complement(1393950..1394714) Rhodopirellula baltica SH 1 1789977 NP_865096.1 CDS RB2686 NC_005027.1 1394692 1394952 D hypothetical protein 1394692..1394952 Rhodopirellula baltica SH 1 1791555 NP_865097.1 CDS RB2688 NC_005027.1 1394945 1398250 D hypothetical protein 1394945..1398250 Rhodopirellula baltica SH 1 1790720 NP_865098.1 CDS RB2690 NC_005027.1 1398243 1399763 D hypothetical protein 1398243..1399763 Rhodopirellula baltica SH 1 1795428 NP_865099.1 CDS RB2693 NC_005027.1 1399779 1402748 D hypothetical protein 1399779..1402748 Rhodopirellula baltica SH 1 1792819 NP_865100.1 CDS RB2697 NC_005027.1 1402745 1404271 D sulfatase 1402745..1404271 Rhodopirellula baltica SH 1 1796736 NP_865101.1 CDS RB2700 NC_005027.1 1404253 1404417 R hypothetical protein complement(1404253..1404417) Rhodopirellula baltica SH 1 1793917 NP_865102.1 CDS RB2701 NC_005027.1 1404427 1406121 R PMID: 8020961 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=3e-25 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=7e-23 gb:AAG58881.1; AE005599_13 (AE005599) sulfatase; E=1e-22 COG: yidJ; COG3119 Arylsulfatase A and related enzymes; E=4e-23 PA0924; COG3083 Predicted hydrolase of alkaline phosphatase; E=3e-04 PFAM: PF00884; Sulfatase; E=2.5e-44; N-acetylgalactosamine 6-sulfate sulfatase complement(1404427..1406121) Rhodopirellula baltica SH 1 1795665 NP_865103.1 CDS RB2702 NC_005027.1 1406189 1407112 D PMID: 8112578 best DB hits: BLAST: swissprot:P43478; CGKA_ALTCA KAPPA-CARRAGEENASE PRECURSOR -----; E=1e-61 gb:AAC27890.1; (AF007559) kappa-carrageenase precursor [Zobellia; E=3e-56 pir:T18265; endo-1,3(4)-beta-glucanase (EC 3.2.1.6) - Clostridium; E=8e-07 COG: TM0024; COG2273 Beta-glucanase/Beta-glucan synthetase; E=1e-05 PFAM: PF00722; Glycosyl hydrolases family 16; E=4.5e-07; kappa-carrageenase [precursor] 1406189..1407112 Rhodopirellula baltica SH 1 1791046 NP_865104.1 CDS RB2704 NC_005027.1 1407229 1407564 D hypothetical protein 1407229..1407564 Rhodopirellula baltica SH 1 1793663 NP_865105.1 CDS RB2705 NC_005027.1 1407665 1408162 D hypothetical protein 1407665..1408162 Rhodopirellula baltica SH 1 1796863 NP_865106.1 CDS RB2706 NC_005027.1 1408155 1408655 D hypothetical protein 1408155..1408655 Rhodopirellula baltica SH 1 1790124 NP_865107.1 CDS RB2707 NC_005027.1 1408843 1410375 R PMID: 8244397 best DB hits: BLAST: gb:AAA16877.1; (L13329) iduronate-2-sulfatase [Homo sapiens]; E=6e-52 gb:AAB33747.1; iduronate-2-sulfatase, IDS {EC 3.1.6.13} [human,; E=3e-51 gb:AAF47771.1; (AE003478) CG12014 gene product [Drosophila; E=7e-49 COG: PA0031; COG3119 Arylsulfatase A and related enzymes; E=1e-33 PFAM: PF00884; Sulfatase; E=8.6e-28; iduronate-2-sulfatase complement(1408843..1410375) Rhodopirellula baltica SH 1 1792737 NP_865108.1 CDS RB2708 NC_005027.1 1410335 1410514 D hypothetical protein 1410335..1410514 Rhodopirellula baltica SH 1 1790042 NP_865109.1 CDS RB2710 NC_005027.1 1410525 1411547 R PMID: 11206551 best DB hits: BLAST: gb:AAG58528.1; AE005565_3 (AE005565) protein of glp regulon; E=2e-08 swissprot:P54493; YQGP_BACSU HYPOTHETICAL 56.4 KD PROTEIN IN; E=1e-07 pir:A82363; glpG protein VC0099 [imported] - Vibrio cholerae (group; E=9e-07 COG: VC0099; COG0705 Uncharacterized membrane protein (homolog of; E=9e-08 PFAM: PF01694; Rhomboid family; E=3.4e-26; glpG protein complement(1410525..1411547) Rhodopirellula baltica SH 1 1790090 NP_865110.1 CDS RB2711 NC_005027.1 1411526 1414822 D best DB hits: PFAM: PF00034; Cytochrome c; E=8.2e-05; hypothetical protein 1411526..1414822 Rhodopirellula baltica SH 1 1794916 NP_865111.1 CDS RB2714 NC_005027.1 1414909 1415817 R PMID: 12024217 best DB hits: BLAST: pir:S62202; hypothetical protein 1 - Methanosarcina barkeri -----; E=0.003 pir:H82720; outer membrane protein XF1123 [imported] - Xylella; E=0.008 swissprot:Q57099; PP26_BRUME 26 KDA PERIPLASMIC IMMUNOGENIC; E=0.093 COG: XF1123; COG2968 Uncharacterized BCR; E=8e-04; hypothetical protein complement(1414909..1415817) Rhodopirellula baltica SH 1 1791151 NP_865112.1 CDS RB2717 NC_005027.1 1415913 1416470 R PMID: 10391943 best DB hits: BLAST: gb:AAD15447.1; (AC006068) unknown protein [Arabidopsis thaliana]; E=8e-21 gb:AAF56179.1; (AE003744) CG10371 gene product [Drosophila; E=3e-17 ddbj:BAB09879.1; (AB013392) contains similarity to unknown; E=4e-16 COG: PH1732; COG2453 Predicted protein-tyrosine phosphatase; E=3e-10 PFAM: PF00782; Dual specificity phosphatase, cataly; E=1.3e-08; dual specificity phosphatase MKP-5 complement(1415913..1416470) Rhodopirellula baltica SH 1 1792704 NP_865113.1 CDS dldH NC_005027.1 1416467 1417891 R PMID: 8487301 best DB hits: BLAST: swissprot:P14218; DLDH_PSEFL DIHYDROLIPOAMIDE DEHYDROGENASE (E3; E=1e-108 pdb:1LPF; A Chain A, Dihydrolipoamide Dehydrogenase (E.C.1.8.1.4); E=1e-108 pir:A45796; dihydrolipoamide dehydrogenase (EC 1.8.1.4) -; E=1e-108 COG: PA1587; COG1249 Dihydrolipoamide dehydrogenase/glutathione; E=1e-109 PFAM: PF00070; Pyridine nucleotide-disulphide; E=1.5e-94 PF02852; Pyridine nucleotide-disulphide; E=5.8e-55; dihydrolipoamide dehydrogenase complement(1416467..1417891) Rhodopirellula baltica SH 1 1793786 NP_865114.1 CDS RB2719 NC_005027.1 1417897 1418148 D hypothetical protein 1417897..1418148 Rhodopirellula baltica SH 1 1795604 NP_865115.1 CDS RB2720 NC_005027.1 1418200 1418964 R signal peptide complement(1418200..1418964) Rhodopirellula baltica SH 1 1792780 NP_865116.1 CDS RB2724 NC_005027.1 1419017 1419817 R hypothetical protein complement(1419017..1419817) Rhodopirellula baltica SH 1 1790592 NP_865117.1 CDS lpxB NC_005027.1 1419868 1421151 R PMID: 2824445 best DB hits: BLAST: swissprot:P10441; LPXB_ECOLI LIPID-A-DISACCHARIDE SYNTHASE -----; E=6e-31 pir:A82101; lipid-A-disaccharide synthase VC2247 [imported] - Vibrio; E=1e-30 pir:SYECLA; lipid-A-disaccharide synthase (EC 2.4.1.182) -; E=2e-30 COG: VC2247; COG0763 Lipid A disaccharide synthetase; E=1e-31 PFAM: PF02684; Lipid-A-disaccharide syntheta; E=1.3e-37; lipid-A-disaccharide synthase complement(1419868..1421151) Rhodopirellula baltica SH 1 1793565 NP_865118.1 CDS RB2726 NC_005027.1 1421143 1421313 D hypothetical protein 1421143..1421313 Rhodopirellula baltica SH 1 1795656 NP_865119.1 CDS RB2728 NC_005027.1 1421291 1423312 D PMID: 8552028 best DB hits: BLAST: pir:D82244; sensory box sensor histidine kinase VC1084 [imported] -; E=4e-15 ddbj:BAB05639.1; (AP001513) two-component sensor histidine kinase; E=1e-13 pir:S60595; FixL protein - Rhizobium leguminosarum ----- gb:; E=3e-13 COG: VC1084; COG0642 Sensory transduction histidine kinases; E=3e-16 PFAM: PF00672; HAMP domain; E=2.9e-10 PF00512; His Kinase A (phosphoacceptor) doma; E=3.2e-08 PF02518; Histidine kinase-, DNA gyrase B-, p; E=7.9e-33; two-component sensor histidine kinase FixL 1421291..1423312 Rhodopirellula baltica SH 1 1793328 NP_865120.1 CDS RB2731 NC_005027.1 1423176 1424672 D PMID: 8346225 best DB hits: BLAST: swissprot:Q06065; ATOC_ECOLI ACETOACETATE METABOLISM REGULATORY; E=5e-83 gb:AAC28085.1; (AF100457) response regulator [Myxococcus xanthus]; E=2e-81 swissprot:Q00934; PILR_PSEAE TYPE 4 FIMBRIAE EXPRESSION REGULATORY; E=4e-79 COG: atoC; COG2204 AAA superfamily ATPases with N-terminal receiver; E=4e-84 VC2137; COG1221 NtrC family transcriptional regulators, ATPase; E=5e-67 PFAM: PF00072; Response regulator receiver doma; E=4.1e-28 PF00158; Sigma-54 interaction domain; E=4.8e-131; acetoacetate metabolism regulatory protein atoC 1423176..1424672 Rhodopirellula baltica SH 1 1795307 NP_865121.1 CDS RB2732 NC_005027.1 1424676 1426343 D PMID: 11181566 best DB hits: BLAST: gb:AAG41945.1; AF304053_1 (AF304053) heparan N-sulfatase [Mus; E=9e-29 gb:AAF29467.1; (AF156255) N-sulfoglucosamine sulfohydrolase [Mus; E=2e-28 gb:AAG41946.1; AF304054_1 (AF304054) mutant heparan N-sulfatase; E=3e-28 COG: Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=9e-29 TM1703; COG1368 Phosphoglycerol transferase and related proteins,; E=2e-04 yejM; COG3083 Predicted hydrolase of alkaline phosphatase; E=0.001 PFAM: PF00884; Sulfatase; E=2.2e-23; heparan N-sulfatase 1424676..1426343 Rhodopirellula baltica SH 1 1795057 NP_865122.1 CDS g6pD NC_005027.1 1426595 1428049 R catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase complement(1426595..1428049) Rhodopirellula baltica SH 1 1791208 NP_865123.1 CDS RB2737 NC_005027.1 1428178 1429320 R hypothetical protein complement(1428178..1429320) Rhodopirellula baltica SH 1 1797113 NP_865124.1 CDS RB2739 NC_005027.1 1429331 1429564 R hypothetical protein complement(1429331..1429564) Rhodopirellula baltica SH 1 1791452 NP_865125.1 CDS RB2740 NC_005027.1 1429648 1430028 R best DB hits: BLAST: gb:AAF60349.1; AF242549_1 (AF242549) DNA-dependent RNA polymerase; E=0.22; DNA-dependent RNA polymerase beta subunit complement(1429648..1430028) Rhodopirellula baltica SH 1 1796727 NP_865126.1 CDS RB2741 NC_005027.1 1429994 1430170 R hypothetical protein complement(1429994..1430170) Rhodopirellula baltica SH 1 1796726 NP_865127.1 CDS RB2743 NC_005027.1 1430412 1431044 D PMID: 8501030 best DB hits: BLAST: embl:CAA75536.1; (Y15252) nitratenitrite regulatory protein; E=3e-25 embl:CAB59507.1; (AL132648) two-component response; E=4e-25 pir:F83160; two-component response regulator NarL PA3879 [imported]; E=4e-25 COG: PA3879; COG2197 Response regulators consisting of a CheY-like; E=4e-26 narP; COG2197 Response regulators consisting of a CheY-like receiver; E=9e-23 DR0891; COG2197 Response regulators consisting of a CheY-like; E=1e-22 PFAM: PF00072; Response regulator receiver doma; E=7.4e-26 PF00325; Bacterial regulatory proteins, c; E=0.038 PF01381; Helix-turn-helix; E=0.45; nitrate/nitrite regulatory protein narP 1430412..1431044 Rhodopirellula baltica SH 1 1791170 NP_865128.1 CDS RB2744 NC_005027.1 1431060 1431278 D hypothetical protein 1431060..1431278 Rhodopirellula baltica SH 1 1795222 NP_865129.1 CDS RB2745 NC_005027.1 1431275 1431400 D hypothetical protein 1431275..1431400 Rhodopirellula baltica SH 1 1790306 NP_865130.1 CDS dapA NC_005027.1 1431502 1432446 D PMID: 8098035 best DB hits: BLAST: swissprot:Q57695; DAPA_METJA DIHYDRODIPICOLINATE SYNTHASE (DHDPS); E=5e-68 swissprot:O67216; DAPA_AQUAE DIHYDRODIPICOLINATE SYNTHASE (DHDPS); E=5e-66 swissprot:Q04796; DAPA_BACSU DIHYDRODIPICOLINATE SYNTHASE (DHDPS); E=5e-58 COG: MJ0244; COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate; E=5e-69 PFAM: PF00701; Dihydrodipicolinate synthetase famil; E=4.6e-119; dihydrodipicolinate synthase 1431502..1432446 Rhodopirellula baltica SH 1 1795034 NP_865131.1 CDS RB2747 NC_005027.1 1432443 1432685 D hypothetical protein 1432443..1432685 Rhodopirellula baltica SH 1 1795205 NP_865132.1 CDS RB2748 NC_005027.1 1432641 1433804 R PMID: 9537320 best DB hits: BLAST: pir:D70357; conserved hypothetical protein aq_648 - Aquifex aeolicus; E=2e-86 ddbj:BAB07130.1; (AP001518) BH3411~unknown conserved protein in; E=7e-81 embl:CAB92115.1; (AL356334) conserved hypothetical protein; E=2e-75 COG: aq_648; COG1060 Thiamine biosynthesis enzyme ThiH and related; E=2e-87; hypothetical protein complement(1432641..1433804) Rhodopirellula baltica SH 1 1790883 NP_865133.1 CDS ubiA NC_005027.1 1433866 1434783 R PMID: 1644192 best DB hits: BLAST: gb:AAB41844.1; (U61168) 4-hydroxybenzoate octaprenyltransferase; E=3e-34 ddbj:BAB05369.1; (AP001512) 4-hydroxybenzoate; E=4e-34 pir:E70304; 4-hydroxybenzoate octaprenyltransferase - Aquifex; E=2e-31 COG: BH1650; COG0382 4-hydroxybenzoate polyprenyltranferase; E=4e-35 AF2036; COG0109 Polyprenyltransferase (cytochrome oxidase assembly; E=0.006 PFAM: PF01040; UbiA prenyltransferase; E=2e-37; 4-hydroxybenzoate octaprenyltransferase complement(1433866..1434783) Rhodopirellula baltica SH 1 1796687 NP_865134.1 CDS ubiX NC_005027.1 1434797 1435465 R PMID: 3040734 best DB hits: BLAST: ddbj:BAB05370.1; (AP001512) 3-octaprenyl-4-hydroxybenzoate; E=2e-39 pir:H83144; probable aromatic acid decarboxylase PA4019 [imported] -; E=1e-37 gb:AAB41845.1; (U61168) 3-octaprenyl-4-hydroxybenzoate; E=2e-35 COG: BH1651; COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase; E=1e-40 PFAM: PF02441; Flavoprotein; E=6.5e-28; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase complement(1434797..1435465) Rhodopirellula baltica SH 1 1795163 NP_865135.1 CDS ubiE NC_005027.1 1435462 1436415 R PMID: 9045837 best DB hits: BLAST: pir:F75277; ubiquinonemenaquinone biosynthesis methyltransferase -; E=2e-44 ddbj:BAB05368.1; (AP001512) 2-heptaprenyl-1,4-naphthoquinone; E=9e-43 ddbj:BAA25267.1; (AB003188) 2-hexaprenyl-1,4-naphthoquinone; E=3e-41 COG: DR2405; COG2226 Methylase involved in ubiquinone/menaquinone; E=2e-45 slr0407; COG0500 SAM-dependent methyltransferases; E=7e-10 PFAM: PF01209; ubiE/COQ5 methyltransferase f; E=2.7e-66; ubiquinone/menaquinone biosynthesis methyltransferase complement(1435462..1436415) Rhodopirellula baltica SH 1 1795092 NP_865136.1 CDS RB2754 NC_005027.1 1436382 1437071 D PMID: 9371463 PMID: 7603433 best DB hits: BLAST: pir:E69106; hypothetical protein MTH1793 - Methanobacterium; E=3e-05 pir:T44528; phosphoglycolate phosphatase (EC 3.1.3.18) [imported] -; E=3e-04 gb:AAG42459.1; AF308467_5 (AF308467) Gph [Klebsiella aerogenes]; E=3e-04 COG: MTH1793; COG0546 Predicted phosphatases; E=3e-06 PFAM: PF00702; haloacid dehalogenase-like hydrolas; E=1.1e-16; phosphoglycolate phosphatase 1436382..1437071 Rhodopirellula baltica SH 1 1795020 NP_865137.1 CDS RB2761 NC_005027.1 1437336 1438115 D PMID: 1447140 PMID: 9742696 best DB hits: BLAST: gb:AAD40344.1; U88088_22 (U88088) OmpA [Pseudomonas alcaligenes]; E=5e-08 swissprot:Q10557; Y899_MYCTU HYPOTHETICAL 33.6 KDA PROTEIN RV0899; E=3e-07 gb:AAD39495.1; AF145799_1 (AF145799) immunogenic 23 kDa; E=1e-06 COG: Rv0899; COG2885 Outer membrane protein and related; E=2e-08 aq_1002; COG1360 Flagellar motor protein; E=2e-07 XF0363; COG2885 Outer membrane protein and related; E=1e-05 PFAM: PF01486; K-box region; E=0.5 PF00691; OmpA family; E=4.9e-06; outer membrane protein OmpA 1437336..1438115 Rhodopirellula baltica SH 1 1796189 NP_865138.1 CDS RB2763 NC_005027.1 1438190 1439626 R signal peptide complement(1438190..1439626) Rhodopirellula baltica SH 1 1795199 NP_865139.1 CDS RB2764 NC_005027.1 1439630 1442155 R signal peptide complement(1439630..1442155) Rhodopirellula baltica SH 1 1793956 NP_865140.1 CDS RB2771 NC_005027.1 1442289 1443728 R best DB hits: BLAST: pir:C83140; hypothetical protein PA4048 [imported] - Pseudomonas; E=2e-04 swissprot:Q9ZC99; Y867_RICPR HYPOTHETICAL PROTEIN RP867 -----; E=0.003 swissprot:P29938; YCBV_PSEDE HYPOTHETICAL 25.1 KDA PROTEIN IN COBV; E=0.007; hypothetical protein complement(1442289..1443728) Rhodopirellula baltica SH 1 1794521 NP_865141.1 CDS RB2774 NC_005027.1 1443786 1444034 D best DB hits: BLAST: pir:E64732; yacG protein - Escherichia coli (strain K-12) -----; E=9e-08 gb:AAK02173.1; (AE006044) unknown [Pasteurella multocida]; E=8e-05 pir:E82078; conserved hypothetical protein VC2429 [imported] -; E=2e-04 COG: yacG; COG3024 Uncharacterized BCR; E=9e-09; hypothetical protein 1443786..1444034 Rhodopirellula baltica SH 1 1794119 NP_865142.1 CDS greA NC_005027.1 1444306 1444785 D PMID: 7854424 best DB hits: BLAST: pir:E81447; transcription elongation factor Cj0287c [imported] -; E=1e-27 swissprot:P43881; GREA_HAEIN TRANSCRIPTION ELONGATION FACTOR GREA; E=3e-27 gb:AAK02799.1; (AE006109) GreA [Pasteurella multocida]; E=4e-27 COG: Cj0287c; COG0782 Transcription elongation factor; E=1e-28 PFAM: PF01272; Prokaryotic transcription elongatio; E=2.6e-47; transcription elongation factor greA 1444306..1444785 Rhodopirellula baltica SH 1 1794133 NP_865143.1 CDS RB2781 NC_005027.1 1444782 1445540 D hypothetical protein 1444782..1445540 Rhodopirellula baltica SH 1 1791560 NP_865144.1 CDS RB2782 NC_005027.1 1445576 1447345 D hypothetical protein 1445576..1447345 Rhodopirellula baltica SH 1 1793841 NP_865145.1 CDS RB2784 NC_005027.1 1447454 1448065 R best DB hits: PFAM: PF01957; Protein of unknown function DUF107; E=0.0039; hypothetical protein complement(1447454..1448065) Rhodopirellula baltica SH 1 1795649 NP_865146.1 CDS RB2785 NC_005027.1 1448062 1450374 R PMID: 10484179 best DB hits: BLAST: ddbj:BAB05075.1; (AP001511) BH1356~unknown conserved protein; E=4e-10 swissprot:P54465; YQEZ_BACSU HYPOTHETICAL 46.5 KD PROTEIN IN; E=4e-08 COG: BS_yqeZ_1; COG1030 Periplasmic serine proteases (ClpP class); E=2e-06 BH1356_2; COG1585 Membrane protein implicated in regulation of; E=8e-06 PFAM: PF01957; Protein of unknown function DUF107; E=0.00013; hypothetical protein complement(1448062..1450374) Rhodopirellula baltica SH 1 1790541 NP_865147.1 CDS RB2788 NC_005027.1 1450448 1451896 R PMID: 8920929 best DB hits: BLAST: swissprot:Q10901; EAT1_CAEEL EXCITATORY AMINO ACID TRANSPORTER; E=3e-53 pir:T29633; hypothetical protein C12D12.2 - Caenorhabditis elegans; E=8e-53 gb:AAB41909.1; (U35250) CeGlt-2 [Caenorhabditis elegans]; E=1e-52 COG: aq_1330; COG1301 Na+/H+-dicarboxylate symporters; E=5e-49 PFAM: PF00375; Sodium:dicarboxylate symporter fami; E=5.2e-115; excitatory amino acid transporter complement(1450448..1451896) Rhodopirellula baltica SH 1 1793694 NP_865148.1 CDS RB2789 NC_005027.1 1451914 1453692 D hypothetical protein 1451914..1453692 Rhodopirellula baltica SH 1 1793573 NP_865149.1 CDS RB2794 NC_005027.1 1453732 1454757 R PMID: 9665719 best DB hits: BLAST: gb:AAC64266.1; (AF059612) deoxyribonuclease gamma [Xenopus; E=1e-19 gb:AAB00496.1; (L40823) DNL1L gene product [Homo sapiens]; E=5e-17 gb:AAB17022.1; (U06846) XIB [Homo sapiens]; E=7e-17 PFAM: PF01181; Deoxyribonuclease I (DNase I); E=1.3e-10; deoxyribonuclease gamma [precursor] complement(1453732..1454757) Rhodopirellula baltica SH 1 1795526 NP_865150.1 CDS RB2795 NC_005027.1 1454726 1455370 D hypothetical protein 1454726..1455370 Rhodopirellula baltica SH 1 1794806 NP_865151.1 CDS RB2797 NC_005027.1 1455237 1456379 D PMID: 8063110 best DB hits: BLAST: swissprot:Q57142; C554_NITEU CYTOCHROME C-554 PRECURSOR (C554); E=0.003 pdb:1FT5; A Chain A, Crystal Structure Of The Oxidized State Of; E=0.003; cytochrome c-554 [precursor] 1455237..1456379 Rhodopirellula baltica SH 1 1792455 NP_865152.1 CDS RB2799 NC_005027.1 1456351 1457280 R PMID: 9298659 best DB hits: BLAST: swissprot:P80874; GS69_BACSU GENERAL STRESS PROTEIN 69 (GSP69); E=6e-29 pir:C83506; probable oxidoreductase PA1127 [imported] - Pseudomonas; E=6e-23 pir:H83328; probable oxidoreductase PA2535 [imported] - Pseudomonas; E=7e-20 COG: BS_yhdN; COG0667 Predicted oxidoreductases (related to aryl-alcohol; E=6e-30 TM1743; COG0656 Aldo/keto reductases, related to diketogulonate; E=3e-07 XF0367; COG0667 Predicted oxidoreductases (related to aryl-alcohol; E=4e-07 PFAM: PF00248; Aldo/keto reductase; E=1.3e-12; general stress protein 69 complement(1456351..1457280) Rhodopirellula baltica SH 1 1793482 NP_865153.1 CDS RB2801 NC_005027.1 1457396 1457911 D hypothetical protein 1457396..1457911 Rhodopirellula baltica SH 1 1791448 NP_865154.1 CDS RB2804 NC_005027.1 1458040 1458645 R hypothetical protein complement(1458040..1458645) Rhodopirellula baltica SH 1 1794599 NP_865155.1 CDS RB2806 NC_005027.1 1458677 1458802 D hypothetical protein 1458677..1458802 Rhodopirellula baltica SH 1 1792759 NP_865156.1 CDS RB2807 NC_005027.1 1458786 1459043 R signal peptide complement(1458786..1459043) Rhodopirellula baltica SH 1 1793744 NP_865157.1 CDS RB2809 NC_005027.1 1459065 1459745 R PMID: 11759840 best DB hits: BLAST: pir:T14004; trfA protein - slime mold (Dictyostelium discoideum); E=0.45 PFAM: PF00515; TPR Domain; E=0.00018; trfA protein complement(1459065..1459745) Rhodopirellula baltica SH 1 1793342 NP_865158.1 CDS RB2810 NC_005027.1 1459752 1459901 R hypothetical protein complement(1459752..1459901) Rhodopirellula baltica SH 1 1792447 NP_865159.1 CDS RB2812 NC_005027.1 1459843 1461255 D hypothetical protein 1459843..1461255 Rhodopirellula baltica SH 1 1795060 NP_865160.1 CDS 6pgD NC_005027.1 1461425 1462903 R catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase complement(1461425..1462903) Rhodopirellula baltica SH 1 1791847 NP_865161.1 CDS RB2818 NC_005027.1 1462893 1463057 R hypothetical protein complement(1462893..1463057) Rhodopirellula baltica SH 1 1791076 NP_865162.1 CDS RB2819 NC_005027.1 1463064 1463360 D hypothetical protein 1463064..1463360 Rhodopirellula baltica SH 1 1795923 NP_865163.1 CDS RB2822 NC_005027.1 1463434 1464933 D hypothetical protein 1463434..1464933 Rhodopirellula baltica SH 1 1790023 NP_865164.1 CDS ugpQ NC_005027.1 1464940 1465833 D PMID: 8012593 best DB hits: BLAST: ddbj:BAB07419.1; (AP001519) glycerophosphoryl diester; E=3e-22 pir:E69827; glycerophosphodiester phosphodiesterase homolog yhdW -; E=5e-21 embl:CAC16430.1; (AL450165) secreted hydrolase; E=5e-16 COG: BH3700; COG0584 Glycerophosphoryl diester phosphodiesterase; E=3e-23; glycerophosphoryl diester phosphodiesterase 1464940..1465833 Rhodopirellula baltica SH 1 1790132 NP_865165.1 CDS RB2826 NC_005027.1 1465865 1467310 R hypothetical protein complement(1465865..1467310) Rhodopirellula baltica SH 1 1794908 NP_865166.1 CDS RB2828 NC_005027.1 1467281 1467451 D hypothetical protein 1467281..1467451 Rhodopirellula baltica SH 1 1791283 NP_865167.1 CDS RB2829 NC_005027.1 1467448 1467564 D hypothetical protein 1467448..1467564 Rhodopirellula baltica SH 1 1792687 NP_865168.1 CDS RB2830 NC_005027.1 1467628 1468854 D signal peptide 1467628..1468854 Rhodopirellula baltica SH 1 1795420 NP_865169.1 CDS RB2832 NC_005027.1 1468887 1469096 R hypothetical protein complement(1468887..1469096) Rhodopirellula baltica SH 1 1791778 NP_865170.1 CDS RB2833 NC_005027.1 1469084 1470472 D PMID: 10484179 best DB hits: BLAST: ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=2e-09 ddbj:BAB05884.1; (AP001514) BH2165~unknown conserved protein; E=6e-09 ddbj:BAB04429.1; (AP001509) BH0710~unknown conserved protein; E=1e-07 COG: BH1248; COG0673 Predicted dehydrogenases and related proteins; E=2e-10 PFAM: PF01408; Oxidoreductase, NAD-bin; E=5.1e-18; NADH-dependent dyhydrogenase 1469084..1470472 Rhodopirellula baltica SH 1 1797067 NP_865171.1 CDS RB2837 NC_005027.1 1470531 1472375 D best DB hits: PFAM: PF01011; PQQ enzyme repeat; E=0.14; hypothetical protein 1470531..1472375 Rhodopirellula baltica SH 1 1791328 NP_865172.1 CDS RB2838 NC_005027.1 1472478 1472798 D hypothetical protein 1472478..1472798 Rhodopirellula baltica SH 1 1792878 NP_865173.1 CDS RB2839 NC_005027.1 1472838 1473710 D PMID: 10952301 best DB hits: BLAST: pir:G82190; conserved hypothetical protein VC1503 [imported] -; E=5e-59 pir:H83504; hypothetical protein PA1116 [imported] - Pseudomonas; E=2e-57 ddbj:BAB05048.1; (AP001511) BH1329~unknown conserved protein in; E=2e-17 COG: VC1503; COG2996 Uncharacterized BCR; E=5e-60; hypothetical protein 1472838..1473710 Rhodopirellula baltica SH 1 1796301 NP_865174.1 CDS RB2840 NC_005027.1 1473891 1474409 D PMID: 7579621 best DB hits: BLAST: swissprot:P46358; RFAY_XANCP PROBABLE RNA POLYMERASE SIGMA FACTOR; E=0.001 swissprot:Q44583; NCCH_ALCXX RNA POLYMERASE SIGMA FACTOR NCCH; E=0.11 embl:CAB65647.1; (AL136149) probable ECF-family sigma factor.; E=0.14 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=1.8e-11; RNA polymerase sigma factor nccH 1473891..1474409 Rhodopirellula baltica SH 1 1790796 NP_865175.1 CDS RB2842 NC_005027.1 1474406 1476130 D hypothetical protein 1474406..1476130 Rhodopirellula baltica SH 1 1791920 NP_865176.1 CDS RB2845 NC_005027.1 1476069 1478816 D hypothetical protein 1476069..1478816 Rhodopirellula baltica SH 1 1796701 NP_865177.1 CDS RB2848 NC_005027.1 1478879 1480288 D sulfatase 1478879..1480288 Rhodopirellula baltica SH 1 1794435 NP_865178.1 CDS RB2849 NC_005027.1 1480307 1480933 R PMID: 9359865 best DB hits: BLAST: gb:AAB89115.1; (AE000956) thioredoxin (trx-4) [Archaeoglobus; E=2e-07 pir:G82991; thioredoxin PA5240 [imported] - Pseudomonas aeruginosa; E=5e-07 pir:S46921; thioredoxin homolog - Mycoplasma capricolum (SGC3); E=2e-06 COG: AF2144; COG0526 Thiol-disulfide isomerase and thioredoxins; E=2e-08 PA4061; COG3118 Thioredoxin domain-containing protein; E=3e-04 BS_ydbP; COG0526 Thiol-disulfide isomerase and thioredoxins; E=3e-04 PFAM: PF00085; Thioredoxin; E=0.062; thioredoxin complement(1480307..1480933) Rhodopirellula baltica SH 1 1792425 NP_865179.1 CDS RB2850 NC_005027.1 1481069 1481812 R hypothetical protein complement(1481069..1481812) Rhodopirellula baltica SH 1 1794314 NP_865180.1 CDS RB2851 NC_005027.1 1481951 1482067 D hypothetical protein 1481951..1482067 Rhodopirellula baltica SH 1 1793310 NP_865181.1 CDS RB2852 NC_005027.1 1482149 1482871 R best DB hits: PFAM: PF02517; CAAX amino terminal protease fa; E=0.0017; hypothetical protein complement(1482149..1482871) Rhodopirellula baltica SH 1 1794982 NP_865182.1 CDS RB2853 NC_005027.1 1482846 1482974 D hypothetical protein 1482846..1482974 Rhodopirellula baltica SH 1 1794444 NP_865183.1 CDS RB2855 NC_005027.1 1483049 1484464 R PMID: 9634230 best DB hits: BLAST: swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=8e-27 swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=2e-26 swissprot:P71585; PKNA_MYCTU SERINETHREONINE-PROTEIN; E=2e-25 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=7e-28 PFAM: PF00069; Protein kinase domain; E=6.2e-62; serine/threonine-protein kinase pknB complement(1483049..1484464) Rhodopirellula baltica SH 1 1790192 NP_865184.1 CDS RB2856 NC_005027.1 1484442 1487675 R hypothetical protein complement(1484442..1487675) Rhodopirellula baltica SH 1 1795434 NP_865185.1 CDS RB2860 NC_005027.1 1487828 1489987 D PMID: 10567266 best DB hits: BLAST: pir:C75477; probable fimbrial assembly protein PilM - Deinococcus; E=1e-19 gb:AAK00347.1; AF329876_3 (AF329876) membrane protein; E=1e-06 pir:S75816; membrane protein pilM - Synechocystis sp. (strain PCC; E=8e-06 COG: DR0770; COG0849 Predicted ATPases of the HSP70 class involved in; E=1e-20; fimbrial assembly protein PilM 1487828..1489987 Rhodopirellula baltica SH 1 1795774 NP_865186.1 CDS RB2863 NC_005027.1 1489967 1490074 R hypothetical protein complement(1489967..1490074) Rhodopirellula baltica SH 1 1796718 NP_865187.1 CDS RB2864 NC_005027.1 1490057 1491847 D hypothetical protein 1490057..1491847 Rhodopirellula baltica SH 1 1796284 NP_865188.1 CDS RB2867 NC_005027.1 1491909 1494002 D hypothetical protein 1491909..1494002 Rhodopirellula baltica SH 1 1792359 NP_865189.1 CDS RB2871 NC_005027.1 1494009 1495058 D PMID: 12004073; hypothetical protein 1494009..1495058 Rhodopirellula baltica SH 1 1792032 NP_865190.1 CDS RB2872 NC_005027.1 1495074 1497053 R PMID: 9278513 best DB hits: BLAST: gb:AAB89763.1; (AE001000) signal-transducing histidine kinase; E=3e-31 swissprot:Q9LCC2; PHYA_ANASP CYANOBACTERIAL PHYTOCHROME A -----; E=3e-28 swissprot:Q55168; PHY1_SYNY3 PHYTOCHROME-LIKE PROTEIN CPH1; E=1e-26 COG: slr0473_3; COG0642 Sensory transduction histidine kinases; E=1e-27 PFAM: PF00785; PAC motif; E=9.9e-06 PF00989; PAS domain; E=1.1e-07 PF00785; PAC motif; E=0.058; signal-transducing histidine kinase complement(1495074..1497053) Rhodopirellula baltica SH 1 1795658 NP_865191.1 CDS RB2874 NC_005027.1 1497050 1497319 R hypothetical protein complement(1497050..1497319) Rhodopirellula baltica SH 1 1791090 NP_865192.1 CDS RB2875 NC_005027.1 1497313 1497534 D hypothetical protein 1497313..1497534 Rhodopirellula baltica SH 1 1791932 NP_865193.1 CDS RB2877 NC_005027.1 1497480 1497659 D hypothetical protein 1497480..1497659 Rhodopirellula baltica SH 1 1796784 NP_865194.1 CDS RB2878 NC_005027.1 1497670 1498329 D PMID: 8843436 best DB hits: BLAST: embl:CAB75999.1; (AL157916) hypothetical protein [Streptomyces; E=4e-10 pir:G70571; hypothetical protein Rv2616 - Mycobacterium tuberculosis; E=1e-09 pir:D75322; conserved hypothetical protein - Deinococcus radiodurans; E=1e-08; hypothetical protein 1497670..1498329 Rhodopirellula baltica SH 1 1791918 NP_865195.1 CDS RB2881 NC_005027.1 1498390 1499469 R PMID: 7934835 best DB hits: BLAST: pir:T29905; hypothetical protein F59A3.4 - Caenorhabditis elegans; E=6e-52 pir:A75447; gufA protein - Deinococcus radiodurans (strain R1); E=1e-51 pir:A69162; gufA protein homolog MTH473 - Methanobacterium; E=1e-51 COG: DR1032; COG0428 Predicted divalent heavy-metal cations transporter; E=1e-52; gufA protein complement(1498390..1499469) Rhodopirellula baltica SH 1 1792969 NP_865196.1 CDS RB2883 NC_005027.1 1499497 1499859 D hypothetical protein 1499497..1499859 Rhodopirellula baltica SH 1 1791404 NP_865197.1 CDS galE NC_005027.1 1499820 1500890 D PMID: 9427545 best DB hits: BLAST: embl:CAA66078.1; (X97448) galE [Brucella melitensis]; E=2e-07 gb:AAC46054.1; (U78089) UDP-glucose epimerase [Brucella abortus]; E=4e-07 pir:A70392; UDP-glucose-4-epimerase - Aquifex aeolicus ----- gb:; E=5e-06 COG: aq_1069; COG1087 UDP-glucose 4-epimerase; E=5e-07 aq_1335; COG0451 Nucleoside-diphosphate-sugar epimerases; E=2e-05 BS_galE; COG1087 UDP-glucose 4-epimerase; E=3e-05 PFAM: PF00106; short chain dehydrogenase; E=7.4e-05 PF01370; NAD dependent epimerase/dehydratase; E=0.0054; UDP-glucose epimerase 1499820..1500890 Rhodopirellula baltica SH 1 1794057 NP_865198.1 CDS RB2885 NC_005027.1 1500863 1501522 D PMID: 10192388 best DB hits: BLAST: pir:B72102; conserved hypothetical protein CP0535 [imported] -; E=8e-04 pir:A71548; hypothetical protein CT178 - Chlamydia trachomatis; E=0.68 PFAM: PF00901; Orbivirus outer capsid protein VP5; E=0.16; hypothetical protein 1500863..1501522 Rhodopirellula baltica SH 1 1791451 NP_865199.1 CDS RB2886 NC_005027.1 1501522 1501878 D hypothetical protein 1501522..1501878 Rhodopirellula baltica SH 1 1792165 NP_865200.1 CDS RB2889 NC_005027.1 1501869 1503068 D PMID: 10852478 best DB hits: BLAST: embl:CAB67160.1; (AJ271079) ATP synthase alpha subunit [Oenothera; E=0.72; ATP synthase subunit alpha 1501869..1503068 Rhodopirellula baltica SH 1 1790602 NP_865201.1 CDS RB2893 NC_005027.1 1503130 1505238 R signal peptide complement(1503130..1505238) Rhodopirellula baltica SH 1 1795096 NP_865202.1 CDS RB2894 NC_005027.1 1505235 1505741 R best DB hits: PFAM: PF02472; Biopolymer transport protein ExbD/To; E=0.005; signal peptide complement(1505235..1505741) Rhodopirellula baltica SH 1 1796414 NP_865203.1 CDS RB2895 NC_005027.1 1505738 1506178 R PMID: 2670903 best DB hits: BLAST: pir:S74451; hypothetical protein sll1405 - Synechocystis sp. (strain; E=1e-08 swissprot:P18784; EXBD_ECOLI BIOPOLYMER TRANSPORT EXBD PROTEIN; E=4e-07 gb:AAC78852.1; (AF087669) ExbD [Bordetella bronchiseptica]; E=4e-06 COG: sll1405; COG0848 Biopolymer transport protein; E=1e-09 PFAM: PF02472; Biopolymer transport protein ExbD/To; E=1.1e-11; biopolymer transport exbD protein complement(1505738..1506178) Rhodopirellula baltica SH 1 1796673 NP_865204.1 CDS RB2897 NC_005027.1 1506169 1506909 D PMID: 10086841 best DB hits: BLAST: ddbj:BAB05775.1; (AP001514) BH2056~unknown conserved protein in; E=3e-20 pir:T45542; hypothetical protein [imported] - Klebsiella pneumoniae; E=8e-13 gb:AAG10237.1; AF201699_2 (AF201699) phospholipid; E=8e-08 COG: BH2056; COG0030 Dimethyladenosine transferase (rRNA methylation); E=2e-21 APE1011; COG2518 Protein-L-isoaspartate carboxylmethyltransferase; E=0.008; methyltransferase 1506169..1506909 Rhodopirellula baltica SH 1 1794614 NP_865205.1 CDS RB2900 NC_005027.1 1506927 1507199 D hypothetical protein 1506927..1507199 Rhodopirellula baltica SH 1 1790962 NP_865206.1 CDS RB2901 NC_005027.1 1507210 1508388 D best DB hits: PFAM: PF00432; Prenyltransferase and squalene ox; E=0.6; signal peptide 1507210..1508388 Rhodopirellula baltica SH 1 1793113 NP_865207.1 CDS RB2905 NC_005027.1 1508728 1509531 D PMID: 10484179 best DB hits: BLAST: ddbj:BAB03764.1; (AP001507) signal peptidase-like protein; E=5e-36 swissprot:P37541; YAAT_BACSU HYPOTHETICAL 31.2 KD PROTEIN IN; E=5e-36 gb:AAK04498.1; AE006276_13 (AE006276) HYPOTHETICAL PROTEIN; E=3e-28 COG: BH0045; COG1774 Uncharacterized ACR, PSP1 homologs; E=5e-37; signal peptidase-like protein 1508728..1509531 Rhodopirellula baltica SH 1 1796722 NP_865208.1 CDS RB2907 NC_005027.1 1509575 1510000 D hypothetical protein 1509575..1510000 Rhodopirellula baltica SH 1 1795924 NP_865209.1 CDS RB2908 NC_005027.1 1510001 1510930 D PMID: 11029001 best DB hits: BLAST: embl:CAC11769.1; (AL445064) conserved hypothetical protein; E=5e-08 pir:F70426; conserved hypothetical protein aq_1457 - Aquifex; E=5e-06 pir:H70323; hypothetical protein aq_262 - Aquifex aeolicus -----; E=5e-05 COG: Ta0630; COG0500 SAM-dependent methyltransferases; E=5e-09 PFAM: PF02874; ATP synthase alpha/beta family; E=0.21 PF01135; Protein-L-isoaspartate(D-aspar; E=0.52; hypothetical protein 1510001..1510930 Rhodopirellula baltica SH 1 1795824 NP_865210.1 CDS RB2910 NC_005027.1 1511014 1511319 D hypothetical protein 1511014..1511319 Rhodopirellula baltica SH 1 1794965 NP_865211.1 CDS RB2912 NC_005027.1 1511297 1512238 R PMID: 8843436 best DB hits: BLAST: embl:CAB55658.1; (AL117385) lipoprotein [Streptomyces; E=0.033; lipoprotein complement(1511297..1512238) Rhodopirellula baltica SH 1 1792239 NP_865212.1 CDS RB2914 NC_005027.1 1512416 1513744 D signal peptide 1512416..1513744 Rhodopirellula baltica SH 1 1794838 NP_865213.1 CDS RB2917 NC_005027.1 1513765 1513959 D hypothetical protein 1513765..1513959 Rhodopirellula baltica SH 1 1790596 NP_865214.1 CDS RB2920 NC_005027.1 1513943 1514692 R hypothetical protein complement(1513943..1514692) Rhodopirellula baltica SH 1 1791556 NP_865215.1 CDS RB2922 NC_005027.1 1514631 1514783 D hypothetical protein 1514631..1514783 Rhodopirellula baltica SH 1 1795899 NP_865216.1 CDS RB2923 NC_005027.1 1514780 1514887 D hypothetical protein 1514780..1514887 Rhodopirellula baltica SH 1 1792151 NP_865217.1 CDS RB2924 NC_005027.1 1515025 1515456 R signal peptide complement(1515025..1515456) Rhodopirellula baltica SH 1 1793383 NP_865218.1 CDS RB2926 NC_005027.1 1515563 1515973 R signal peptide complement(1515563..1515973) Rhodopirellula baltica SH 1 1794574 NP_865219.1 CDS RB2927 NC_005027.1 1516044 1516208 D hypothetical protein 1516044..1516208 Rhodopirellula baltica SH 1 1791982 NP_865220.1 CDS RB2928 NC_005027.1 1516229 1516720 R PMID: 8892832 best DB hits: BLAST: gb:AAC44553.1; (U34346) unknown [Paracoccus denitrificans]; E=6e-33 embl:CAB61920.1; (AL133278) acetyltransferase; E=3e-28 swissprot:Q09927; YAL4_SCHPO HYPOTHETICAL 23.8 KD PROTEIN; E=6e-16 COG: BH2104; COG0456 Acetyltransferases; E=0.007 PFAM: PF00583; Acetyltransferase (GNAT) family; E=2.2e-16; acetyltransferase complement(1516229..1516720) Rhodopirellula baltica SH 1 1793530 NP_865221.1 CDS RB2929 NC_005027.1 1516815 1517303 R hypothetical protein complement(1516815..1517303) Rhodopirellula baltica SH 1 1794811 NP_865222.1 CDS RB2930 NC_005027.1 1517344 1517529 R hypothetical protein complement(1517344..1517529) Rhodopirellula baltica SH 1 1792851 NP_865223.1 CDS RB2931 NC_005027.1 1517535 1518137 R PMID: 10984043 best DB hits: BLAST: ddbj:BAB04418.1; (AP001509) ribosomal-protein-alanine; E=5e-15 ddbj:BAB05587.1; (AP001513) BH1868~unknown conserved protein; E=2e-14 pir:E83153; conserved hypothetical protein PA3945 [imported] -; E=2e-14 COG: BH0699; COG1670 Acetyltransferases, including N-acetylases of; E=5e-16 PFAM: PF00583; Acetyltransferase (GNAT) family; E=1.1e-14; acetyltransferase complement(1517535..1518137) Rhodopirellula baltica SH 1 1795502 NP_865224.1 CDS RB2932 NC_005027.1 1518086 1518346 R hypothetical protein complement(1518086..1518346) Rhodopirellula baltica SH 1 1791538 NP_865225.1 CDS RB2934 NC_005027.1 1518862 1519551 R PMID: 2144277 PMID: 10784042 PMID: 11481430 best DB hits: BLAST: swissprot:O67611; ACP_AQUAE ACYL CARRIER PROTEIN (ACP) -----; E=0.018 swissprot:P19372; ACP_RHIME ACYL CARRIER PROTEIN (ACP) -----; E=0.055 swissprot:Q9RG22; ACP_RHILE ACYL CARRIER PROTEIN (ACP) -----; E=0.064 COG: aq_1717a; COG0236 Acyl carrier protein; E=0.002 PFAM: PF00550; Phosphopantetheine attachment site; E=0.3; acyl carrier protein complement(1518862..1519551) Rhodopirellula baltica SH 1 1792082 NP_865226.1 CDS RB2936 NC_005027.1 1519684 1519908 R PMID: 8134129 best DB hits: BLAST: swissprot:P53356; HT16_HYDAT tyrosine-protein kinase -----; E=0.007 gb:AAF37305.1; AC005931_3 (AC005931) 6-PhosphoFructo-2-Kinase; E=0.008 gb:AAF58766.1; (AE003828) CG16728 gene product [Drosophila; E=0.009 PFAM: PF00023; Ank repeat; E=2.4e-08; tyrosine-protein kinase complement(1519684..1519908) Rhodopirellula baltica SH 1 1793903 NP_865227.1 CDS RB2939 NC_005027.1 1519916 1520407 R PMID: 8843436 best DB hits: BLAST: embl:CAB66271.1; (AL136519) integral-membrane protein.; E=1e-06 embl:CAB72202.1; (AL138851) integral-membrane protein; E=5e-06; integral-membrane protein complement(1519916..1520407) Rhodopirellula baltica SH 1 1794922 NP_865228.1 CDS RB2940 NC_005027.1 1520430 1520870 D hypothetical protein 1520430..1520870 Rhodopirellula baltica SH 1 1792105 NP_865229.1 CDS RB2941 NC_005027.1 1520821 1521297 R hypothetical protein complement(1520821..1521297) Rhodopirellula baltica SH 1 1795122 NP_865230.1 CDS RB2943 NC_005027.1 1521275 1521535 D hypothetical protein 1521275..1521535 Rhodopirellula baltica SH 1 1793625 NP_865231.1 CDS RB2945 NC_005027.1 1521542 1521682 D hypothetical protein 1521542..1521682 Rhodopirellula baltica SH 1 1792155 NP_865232.1 CDS RB2946 NC_005027.1 1521688 1521834 D hypothetical protein 1521688..1521834 Rhodopirellula baltica SH 1 1791132 NP_865233.1 CDS RB2948 NC_005027.1 1521903 1522349 R hypothetical protein complement(1521903..1522349) Rhodopirellula baltica SH 1 1796943 NP_865234.1 CDS RB2949 NC_005027.1 1522460 1522972 R hypothetical protein complement(1522460..1522972) Rhodopirellula baltica SH 1 1795132 NP_865235.1 CDS RB2950 NC_005027.1 1522929 1523081 R hypothetical protein complement(1522929..1523081) Rhodopirellula baltica SH 1 1791947 NP_865236.1 CDS RB2951 NC_005027.1 1523092 1523616 R hypothetical protein complement(1523092..1523616) Rhodopirellula baltica SH 1 1793229 NP_865237.1 CDS RB2952 NC_005027.1 1523656 1523832 D hypothetical protein 1523656..1523832 Rhodopirellula baltica SH 1 1796810 NP_865238.1 CDS RB2953 NC_005027.1 1523812 1524120 R hypothetical protein complement(1523812..1524120) Rhodopirellula baltica SH 1 1790261 NP_865239.1 CDS RB2955 NC_005027.1 1524115 1524438 D hypothetical protein 1524115..1524438 Rhodopirellula baltica SH 1 1791439 NP_865240.1 CDS RB2956 NC_005027.1 1524488 1524613 D hypothetical protein 1524488..1524613 Rhodopirellula baltica SH 1 1792002 NP_865241.1 CDS RB2957 NC_005027.1 1524625 1524816 R hypothetical protein complement(1524625..1524816) Rhodopirellula baltica SH 1 1795095 NP_865242.1 CDS RB2958 NC_005027.1 1524723 1524962 D hypothetical protein 1524723..1524962 Rhodopirellula baltica SH 1 1796696 NP_865243.1 CDS RB2960 NC_005027.1 1524959 1526428 D PMID: 9389475 best DB hits: PFAM: PF01011; PQQ enzyme repeat; E=0.12; hypothetical protein 1524959..1526428 Rhodopirellula baltica SH 1 1795765 NP_865244.1 CDS RB2962 NC_005027.1 1526441 1526764 R hypothetical protein complement(1526441..1526764) Rhodopirellula baltica SH 1 1792156 NP_865245.1 CDS RB2963 NC_005027.1 1526707 1527066 D hypothetical protein 1526707..1527066 Rhodopirellula baltica SH 1 1795072 NP_865246.1 CDS RB2966 NC_005027.1 1527063 1529081 D PMID: 8444796 best DB hits: BLAST: pir:E82299; cell division protein FtsH VC0637 [imported] - Vibrio; E=1e-133 swissprot:P28691; FTSH_ECOLI CELL DIVISION PROTEIN FTSH -----; E=1e-129 gb:AAA97508.1; (U01376) ATP-binding protein [Escherichia coli]; E=1e-129 COG: VC0637; COG0465 ATP-dependent Zn proteases; E=1e-134 PFAM: PF00158; Sigma-54 interaction domain; E=0.062 PF00910; RNA helicase; E=0.21 PF01695; IstB-like ATP binding protein; E=0.83; cell division protein FtsH 1527063..1529081 Rhodopirellula baltica SH 1 1790618 NP_865247.1 CDS RB2968 NC_005027.1 1529085 1530245 D PMID: 7542800 best DB hits: BLAST: swissprot:P45339; YJEQ_HAEIN HYPOTHETICAL PROTEIN HI1714 -----; E=2e-35 gb:AAG59360.1; AE005649_5 (AE005649) orf, hypothetical protein; E=5e-34 pir:S56389; hypothetical 37.7K protein (psd-amiB intergenic region); E=8e-34 COG: HI1714; COG1162 Predicted GTPases; E=1e-36 PFAM: PF00005; ABC transporter; E=0.027 PF02421; Ferrous iron transport protein B; E=0.12; GTPase 1529085..1530245 Rhodopirellula baltica SH 1 1797115 NP_865248.1 CDS RB2970 NC_005027.1 1530415 1531200 D PMID: 8340421 best DB hits: BLAST: ddbj:BAA34057.1; (AB019196) phosphatidylethanolamine; E=3e-21 swissprot:Q05197; PMTA_RHOSH PHOSPHATIDYLETHANOLAMINE; E=1e-20 pir:E72392; ubiquinonemenaquinone biosynthesis-related protein -; E=7e-08 COG: TM0318; COG0500 SAM-dependent methyltransferases; E=7e-09 PA5063; COG2226 Methylase involved in ubiquinone/menaquinone; E=1e-05 PA3171; COG2227; E=1e-04 PFAM: PF01209; ubiE/COQ5 methyltransferase f; E=4.9e-06; phosphatidylethanolamine N-methyltransferase 1530415..1531200 Rhodopirellula baltica SH 1 1793587 NP_865249.1 CDS RB2971 NC_005027.1 1531140 1532180 D PMID: 10360571 best DB hits: BLAST: embl:CAB61271.1; (AL132991) hypothetical protein SCF55.01c; E=1e-04 pir:F72378; conserved hypothetical protein - Thermotoga maritima; E=0.002 swissprot:O50580; DT3E_PSECI D-TAGATOSE 3-EPIMERASE -----; E=0.10 COG: TM0422; COG1082 Predicted endonucleases; E=2e-04; hypothetical protein 1531140..1532180 Rhodopirellula baltica SH 1 1793572 NP_865250.1 CDS RB2973 NC_005027.1 1532187 1532315 D hypothetical protein 1532187..1532315 Rhodopirellula baltica SH 1 1793899 NP_865251.1 CDS glnD NC_005027.1 1532322 1534973 R PMID: 11065377 PMID: 8412694 best DB hits: BLAST: gb:AAF17352.1; AF155830_1 (AF155830) ; E=1e-62 swissprot:Q9RAE4; GLND_RHILV [PROTEIN-PII] URIDYLYLTRANSFERASE; E=1e-62 swissprot:Q9KPV0; GLND_VIBCH [PROTEIN-PII] URIDYLYLTRANSFERASE; E=1e-61 COG: VC2262; COG2844 UTP:GlnB (protein PII) uridylyltransferase; E=9e-63 PFAM: PF01966; HD domain; E=0.48 PF01842; ACT domain; E=0.0017; uridylyltransferase/uridylyl-removing enzyme glnD complement(1532322..1534973) Rhodopirellula baltica SH 1 1792122 NP_865252.1 CDS glnB NC_005027.1 1534983 1535384 R PMID: 2907369 PMID: 2885322 PMID: 2907369 PMID: 8226691 best DB hits: BLAST: pir:D82102; nitrogen regulatory protein P-II VC2239 [imported] -; E=9e-35 pir:H81961; nitrogen regulatory protein P-II 1 NMA0447 [imported] -; E=3e-34 pir:B81019; nitrogen regulatory protein P-II NMB1995 [imported] -; E=3e-34 COG: VC2239; COG0347 Nitrogen regulatory protein PII; E=9e-36 PFAM: PF00543; Nitrogen regulatory protein P-II; E=7.7e-53; nitrogen regulatory protein P-II complement(1534983..1535384) Rhodopirellula baltica SH 1 1793498 NP_865253.1 CDS RB2976 NC_005027.1 1535418 1536008 R PMID: 10484179 best DB hits: BLAST: gb:AAG19830.1; (AE005068) Vng1547c [Halobacterium sp. NRC-1]; E=2e-29 ddbj:BAB05314.1; (AP001512) BH1595~unknown conserved protein; E=3e-29 pir:G83096; conserved hypothetical protein PA4399 [imported] -; E=8e-29 COG: VNG1547C; COG2096 Uncharacterized ACR; E=2e-30 PFAM: PF01923; Protein of unknown function DUF80; E=6.9e-58; hypothetical protein complement(1535418..1536008) Rhodopirellula baltica SH 1 1792039 NP_865254.1 CDS RB2978 NC_005027.1 1536161 1536619 D PMID: 8843436 best DB hits: BLAST: embl:CAC16440.1; (AL450165) MutT-family protein; E=2e-05 swissprot:P56380; AP4A_MOUSE BIS(5'-NUCLEOSYL)-TETRAPHOSPHATASE; E=5e-05 pir:F75532; MutTnudix family protein - Deinococcus radiodurans; E=3e-04 COG: DR0329; COG0494 NTP pyrophosphohydrolases including oxidative damage; E=3e-05 DR0004; COG0494 NTP pyrophosphohydrolases including oxidative; E=4e-05 DR0550; COG0494 NTP pyrophosphohydrolases including oxidative damage; E=1e-04 PFAM: PF00293; MutT-like domain; E=4.8e-17; MutT-family protein 1536161..1536619 Rhodopirellula baltica SH 1 1796674 NP_865255.1 CDS RB2979 NC_005027.1 1536671 1537645 D best DB hits: PFAM: PF01322; Cytochrome C'; E=0.0044; signal peptide 1536671..1537645 Rhodopirellula baltica SH 1 1797102 NP_865256.1 CDS RB2981 NC_005027.1 1537699 1537815 R hypothetical protein complement(1537699..1537815) Rhodopirellula baltica SH 1 1792115 NP_865257.1 CDS RB2982 NC_005027.1 1537945 1539789 D PMID: 9389475 best DB hits: BLAST: gb:AAB89832.1; (AE001006) chloride channel, ; E=3e-82 embl:CAC12582.1; (AL445067) chloride channel (CLC-3) related; E=2e-49 pir:B70617; hypothetical protein Rv0143c - Mycobacterium; E=1e-33 COG: AF1415_1; COG0038 Chloride channel protein EriC; E=7e-68 aq_438_2; COG0517 CBS domains; E=6e-09 sll0855; COG0038 Chloride channel protein EriC; E=1e-08 PFAM: PF00654; Voltage gated chloride channe; E=1.8e-62 PF00571; CBS domain; E=1.7e-06; chloride channel 1537945..1539789 Rhodopirellula baltica SH 1 1789990 NP_865258.1 CDS RB2983 NC_005027.1 1539799 1540680 R PMID: 9809430 PMID: 2471187 PMID: 2551682 best DB hits: BLAST: swissprot:Q9X725; OXYR_ERWCH HYDROGEN PEROXIDE-INDUCIBLE GENES; E=8e-33 swissprot:P71318; OXYR_ERWCA HYDROGEN PEROXIDE-INDUCIBLE GENES; E=2e-32 gb:AAA24257.1; (J04553) oxyR protein [Escherichia coli]; E=1e-30 COG: oxyR; COG0583 Transcriptional regulator; E=3e-31 PFAM: PF00126; Bacterial regulatory helix-turn-heli; E=1.6e-47; hydrogen peroxide-inducible genes activator complement(1539799..1540680) Rhodopirellula baltica SH 1 1794074 NP_865259.1 CDS RB2985 NC_005027.1 1540943 1542040 R PMID: 8905231 best DB hits: BLAST: pir:S75877; hypothetical protein slr1166 - Synechocystis sp. (strain; E=1e-18 swissprot:Q48453; YC07_KLEPN HYPOTHETICAL 41.2 KD PROTEIN IN CPS; E=5e-09 pir:T46662; alpha 1,2 N-acetylglucosamine transferase [imported] -; E=7e-08 COG: slr1166; COG0438 Predicted glycosyltransferases; E=1e-19 PFAM: PF00534; Glycosyl transferases group 1; E=7.8e-18; glycosyltransferase complement(1540943..1542040) Rhodopirellula baltica SH 1 1794109 NP_865260.1 CDS RB2986 NC_005027.1 1542063 1543823 R PMID: 9692189 best DB hits: BLAST: pir:JE0181; oligo-1,6-glucosidase (EC 3.2.1.10) - Bacillus; E=1e-143 ddbj:BAB18518.1; (AB003697) oligo-1,6-glucosidase [Bacillus; E=1e-143 gb:AAD50603.1; AF096282_1 (AF096282) alpha-glucosidase [Thermus; E=1e-141 COG: DR1375; COG0366 Glycosidases; E=1e-140 PFAM: PF00128; Alpha amylase, catalytic domain; E=1.8e-99; oligo-1,6-glucosidase complement(1542063..1543823) Rhodopirellula baltica SH 1 1793526 NP_865261.1 CDS RB2988 NC_005027.1 1543851 1545296 R PMID: 10360571 best DB hits: BLAST: pir:E72203; conserved hypothetical protein - Thermotoga maritima; E=7e-25 pir:B72278; conserved hypothetical protein - Thermotoga maritima; E=4e-17 gb:AAG45396.1; AF307053_11 (AF307053) unknown [Thermococcus; E=6e-10 COG: TM1852; COG2152 Uncharacterized ACR; E=7e-26; hypothetical protein complement(1543851..1545296) Rhodopirellula baltica SH 1 1793832 NP_865262.1 CDS RB2990 NC_005027.1 1545303 1547579 R PMID: 9537320 best DB hits: BLAST: pir:B70393; hypothetical protein aq_1080 - Aquifex aeolicus -----; E=2e-11 pir:E83367; hypothetical protein PA2236 [imported] - Pseudomonas; E=8e-09 pir:S77553; probable hexosyltransferase (EC 2.4.1.-) sll1971; E=4e-07 COG: aq_1080; COG0438 Predicted glycosyltransferases; E=2e-12 PFAM: PF00534; Glycosyl transferases group 1; E=1.3e-15; glycosyltransferase complement(1545303..1547579) Rhodopirellula baltica SH 1 1792258 NP_865263.1 CDS RB2991 NC_005027.1 1547583 1548758 R PMID: 10360571 best DB hits: BLAST: pir:E72203; conserved hypothetical protein - Thermotoga maritima; E=2e-36 pir:B72278; conserved hypothetical protein - Thermotoga maritima; E=9e-34 gb:AAG45396.1; AF307053_11 (AF307053) unknown [Thermococcus; E=5e-18 COG: TM1852; COG2152 Uncharacterized ACR; E=2e-37; hypothetical protein complement(1547583..1548758) Rhodopirellula baltica SH 1 1791375 NP_865264.1 CDS RB2992 NC_005027.1 1548650 1550494 R PMID: 7686067 PMID: 2497294 best DB hits: BLAST: ddbj:BAB06792.1; (AP001517) PTS system, enzyme I [Bacillus; E=6e-71 swissprot:P08838; PT1_BACSU PHOSPHOENOLPYRUVATE-PROTEIN; E=2e-68 swissprot:O69251; PT1_BACME PHOSPHOENOLPYRUVATE-PROTEIN; E=5e-67 COG: BH3073; COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI; E=5e-72 PFAM: PF00391; PEP-utilizing enzyme, mobile; E=2.7e-21 PF02896; PEP-utilizing enzyme, TIM bar; E=1.5e-63; phosphoenolpyruvate-protein phosphotransferase complement(1548650..1550494) Rhodopirellula baltica SH 1 1792761 NP_865265.1 CDS RB2993 NC_005027.1 1550491 1550784 R hypothetical protein complement(1550491..1550784) Rhodopirellula baltica SH 1 1792201 NP_865266.1 CDS RB2995 NC_005027.1 1550765 1551052 R hypothetical protein complement(1550765..1551052) Rhodopirellula baltica SH 1 1793382 NP_865267.1 CDS RB2997 NC_005027.1 1551049 1551603 R hypothetical protein complement(1551049..1551603) Rhodopirellula baltica SH 1 1796790 NP_865268.1 CDS RB2998 NC_005027.1 1551732 1552886 R PMID: 7894707 best DB hits: BLAST: pir:T35404; probable squalene-hopene cyclase - Streptomyces; E=4e-04 swissprot:P33990; SQHC_ZYMMO SQUALENE--HOPENE CYCLASE -----; E=0.002 pir:T45142; squalene-hopene cyclase [imported] - Methylococcus; E=0.003 COG: slr2089; COG1657 Squalene cyclase; E=0.002; squalene-hopene cyclase complement(1551732..1552886) Rhodopirellula baltica SH 1 1794446 NP_865269.1 CDS RB3001 NC_005027.1 1553125 1554588 R best DB hits: PFAM: PF02012; BNR repeat; E=0.05; hypothetical protein complement(1553125..1554588) Rhodopirellula baltica SH 1 1796623 NP_865270.1 CDS RB3003 NC_005027.1 1554413 1555936 D PMID: 9371463 best DB hits: BLAST: pir:H69064; serinethreonine protein kinase related protein -; E=0.005 gb:AAG31643.1; AF309488_1 (AF309488) methanol dehydrogenase large; E=0.009 pir:F72237; conserved hypothetical protein - Thermotoga maritima; E=0.29 COG: MTH1485; COG1520 Uncharacterized proteins of WD40-like repeat family; E=5e-04 PFAM: PF01011; PQQ enzyme repeat; E=0.00081; serine/threonine protein kinase related protein 1554413..1555936 Rhodopirellula baltica SH 1 1797109 NP_865271.1 CDS RB3005 NC_005027.1 1556094 1556690 R hypothetical protein complement(1556094..1556690) Rhodopirellula baltica SH 1 1792062 NP_865272.1 CDS RB3006 NC_005027.1 1556810 1560271 R PMID: 1400240 PMID: 8591030 best DB hits: BLAST: pir:A49227; sialidase - Actinomyces viscosus ----- gb:; E=1e-06 pir:S20590; exo-alpha-sialidase (EC 3.2.1.18) - Actinomyces viscosus; E=2e-06 swissprot:Q02834; NANH_MICVI SIALIDASE PRECURSOR (NEURAMINIDASE); E=3e-05 PFAM: PF02012; BNR repeat; E=0.098; sialidase complement(1556810..1560271) Rhodopirellula baltica SH 1 1790735 NP_865273.1 CDS RB3009 NC_005027.1 1560249 1560431 D hypothetical protein 1560249..1560431 Rhodopirellula baltica SH 1 1795385 NP_865274.1 CDS perA NC_005027.1 1560514 1563087 D PMID: 2670897 best DB hits: BLAST: swissprot:P14412; CATA_BACST PEROXIDASECATALASE; E=0.0 ddbj:BAA36976.1; (AB020064) catalase [Bacillus; E=0.0 ddbj:BAA36977.1; (AB020065) catalase [Bacillus; E=0.0 COG: BH0906; COG0376 Catalase (peroxidase I); E=0.0 PFAM: PF00141; Peroxidase; E=2.4e-87; peroxidase/catalase 1560514..1563087 Rhodopirellula baltica SH 1 1793861 NP_865275.1 CDS RB3012 NC_005027.1 1563069 1563395 R hypothetical protein complement(1563069..1563395) Rhodopirellula baltica SH 1 1793170 NP_865276.1 CDS RB3013 NC_005027.1 1563386 1563619 D hypothetical protein 1563386..1563619 Rhodopirellula baltica SH 1 1796875 NP_865277.1 CDS RB3014 NC_005027.1 1563732 1565306 R PMID: 9371463 best DB hits: BLAST: pir:H69068; cell surface glycoprotein (s-layer protein) related; E=2e-25 pir:A72266; hypothetical protein - Thermotoga maritima (strain MSB8); E=5e-04; cell surface glycoprotein (s-layer protein) related protein complement(1563732..1565306) Rhodopirellula baltica SH 1 1796671 NP_865278.1 CDS RB3016 NC_005027.1 1565377 1565832 R PMID: 11248100 best DB hits: BLAST: gb:AAK03752.1; (AE006203) unknown [Pasteurella multocida]; E=6e-19 pir:B64825; hypothetical protein b0866 - Escherichia coli -----; E=3e-18 ddbj:BAB04830.1; (AP001510) BH1111~unknown conserved protein; E=4e-18 COG: ybjQ; COG0393 Uncharacterized ACR; E=3e-19 PFAM: PF01906; Domain of unknown function DUF74; E=2.7e-35; hypothetical protein complement(1565377..1565832) Rhodopirellula baltica SH 1 1795961 NP_865279.1 CDS RB3020 NC_005027.1 1565935 1566234 R hypothetical protein complement(1565935..1566234) Rhodopirellula baltica SH 1 1791986 NP_865280.1 CDS RB3023 NC_005027.1 1566414 1566881 R PMID: 11689431 best DB hits: BLAST: ddbj:BAA09768.1; (D63481) The KIAA0147 gene product is related to; E=0.009 gb:AAK02818.1; (AE006110) HtrA [Pasteurella multocida]; E=0.038 swissprot:P37764; YAEL_ECOLI HYPOTHETICAL 49.1 KDA PROTEIN IN; E=0.056 COG: yaeL; COG0750 Predicted membrane-associated Zn-dependent proteases 1; E=0.005 PFAM: PF00595; PDZ domain (Also known as DHR or GLG; E=0.00026; protease ecfE complement(1566414..1566881) Rhodopirellula baltica SH 1 1795025 NP_865281.1 CDS RB3029 NC_005027.1 1567052 1567492 R hypothetical protein complement(1567052..1567492) Rhodopirellula baltica SH 1 1793941 NP_865282.1 CDS RB3031 NC_005027.1 1567532 1567705 R hypothetical protein complement(1567532..1567705) Rhodopirellula baltica SH 1 1795744 NP_865283.1 CDS RB3032 NC_005027.1 1567813 1569246 D PMID: 11214968 best DB hits: BLAST: pir:S74039; hypothetical protein c0103 - Sulfolobus solfataricus; E=0.060 pir:T50944; hypothetical protein [imported] - Pseudomonas; E=0.62 PFAM: PF00452; Apoptosis regulator proteins, Bcl-2; E=0.19 PF01587; Monocarboxylate transporter; E=0.79; hypothetical protein 1567813..1569246 Rhodopirellula baltica SH 1 1796755 NP_865284.1 CDS RB3034 NC_005027.1 1569573 1572089 R signal peptide complement(1569573..1572089) Rhodopirellula baltica SH 1 1791146 NP_865285.1 CDS RB3036 NC_005027.1 1572092 1573582 R hypothetical protein complement(1572092..1573582) Rhodopirellula baltica SH 1 1790536 NP_865286.1 CDS RB3038 NC_005027.1 1573758 1573979 D hypothetical protein 1573758..1573979 Rhodopirellula baltica SH 1 1793361 NP_865287.1 CDS RB3040 NC_005027.1 1573993 1574517 R signal peptide complement(1573993..1574517) Rhodopirellula baltica SH 1 1796021 NP_865288.1 CDS RB3042 NC_005027.1 1574747 1575622 R hypothetical protein complement(1574747..1575622) Rhodopirellula baltica SH 1 1790321 NP_865289.1 CDS RB3043 NC_005027.1 1575707 1575892 D hypothetical protein 1575707..1575892 Rhodopirellula baltica SH 1 1796682 NP_865290.1 CDS RB3044 NC_005027.1 1576053 1576196 D signal peptide 1576053..1576196 Rhodopirellula baltica SH 1 1790033 NP_865291.1 CDS RB3045 NC_005027.1 1576172 1576411 R hypothetical protein complement(1576172..1576411) Rhodopirellula baltica SH 1 1794525 NP_865292.1 CDS RB3047 NC_005027.1 1576513 1576914 R hypothetical protein complement(1576513..1576914) Rhodopirellula baltica SH 1 1793255 NP_865293.1 CDS RB3048 NC_005027.1 1576919 1577185 D hypothetical protein 1576919..1577185 Rhodopirellula baltica SH 1 1793015 NP_865294.1 CDS RB3050 NC_005027.1 1577122 1577619 R hypothetical protein complement(1577122..1577619) Rhodopirellula baltica SH 1 1790077 NP_865295.1 CDS RB3052 NC_005027.1 1577692 1577799 R hypothetical protein complement(1577692..1577799) Rhodopirellula baltica SH 1 1795723 NP_865296.1 CDS RB3053 NC_005027.1 1577917 1579383 R PMID: 10768931 best DB hits: BLAST: gb:AAK00475.1; (AF200692) unknown [Shigella flexneri 2a]; E=5e-34 pir:H64964; probable membrane protein b2001 - Escherichia coli; E=1e-18 swissprot:P76361; YEER_ECOLI HYPOTHETICAL 57.2 KDA PROTEIN IN; E=1e-18; hypothetical protein complement(1577917..1579383) Rhodopirellula baltica SH 1 1792025 NP_865297.1 CDS RB3055 NC_005027.1 1579428 1579586 R hypothetical protein complement(1579428..1579586) Rhodopirellula baltica SH 1 1793427 NP_865298.1 CDS RB3056 NC_005027.1 1579679 1579951 R hypothetical protein complement(1579679..1579951) Rhodopirellula baltica SH 1 1795186 NP_865299.1 CDS RB3057 NC_005027.1 1579920 1580138 D hypothetical protein 1579920..1580138 Rhodopirellula baltica SH 1 1795956 NP_865300.1 CDS RB3059 NC_005027.1 1580135 1580323 D hypothetical protein 1580135..1580323 Rhodopirellula baltica SH 1 1794320 NP_865301.1 CDS RB3060 NC_005027.1 1580342 1580947 R signal peptide complement(1580342..1580947) Rhodopirellula baltica SH 1 1795729 NP_865302.1 CDS RB3061 NC_005027.1 1580981 1581151 R hypothetical protein complement(1580981..1581151) Rhodopirellula baltica SH 1 1792526 NP_865303.1 CDS RB3062 NC_005027.1 1581001 1581282 R hypothetical protein complement(1581001..1581282) Rhodopirellula baltica SH 1 1790681 NP_865304.1 CDS RB3063 NC_005027.1 1581333 1581500 D hypothetical protein 1581333..1581500 Rhodopirellula baltica SH 1 1791580 NP_865305.1 CDS RB3064 NC_005027.1 1581347 1581532 R hypothetical protein complement(1581347..1581532) Rhodopirellula baltica SH 1 1796188 NP_865306.1 CDS RB3065 NC_005027.1 1581536 1582336 R PMID: 9384377 best DB hits: BLAST: pir:G69742; hypothetical protein ybaJ - Bacillus subtilis -----; E=7e-69 pir:E83313; conserved hypothetical protein PA2650 [imported] -; E=2e-60 pir:T35744; hypothetical protein SC7H2.13 - Streptomyces coelicolor; E=9e-05 COG: BS_ybaJ; COG0500 SAM-dependent methyltransferases; E=6e-70; SAM-dependent methyltransferase complement(1581536..1582336) Rhodopirellula baltica SH 1 1796031 NP_865307.1 CDS RB3067 NC_005027.1 1582389 1582850 R PMID: 6087149 best DB hits: BLAST: embl:CAA24848.1; (V01555) BSLF1 reading frame, homologous to RF 6; E=0.091; helicase/primase complex protein complement(1582389..1582850) Rhodopirellula baltica SH 1 1796141 NP_865308.1 CDS RB3068 NC_005027.1 1582898 1583305 D hypothetical protein 1582898..1583305 Rhodopirellula baltica SH 1 1794546 NP_865309.1 CDS RB3069 NC_005027.1 1583339 1583455 D hypothetical protein 1583339..1583455 Rhodopirellula baltica SH 1 1794796 NP_865310.1 CDS RB3070 NC_005027.1 1583469 1584986 R PMID: 10484179 best DB hits: BLAST: ddbj:BAB05884.1; (AP001514) BH2165~unknown conserved protein; E=1e-09 embl:CAC24034.1; (AL512980) ORF-c34_017 [Sulfolobus solfataricus]; E=4e-09 ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=1e-08 COG: BH2165; COG0673 Predicted dehydrogenases and related proteins; E=1e-10 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=1.3e-20; oxidoreductase complement(1583469..1584986) Rhodopirellula baltica SH 1 1791255 NP_865311.1 CDS RB3073 NC_005027.1 1585025 1585180 R hypothetical protein complement(1585025..1585180) Rhodopirellula baltica SH 1 1796585 NP_865312.1 CDS RB3074 NC_005027.1 1585164 1585325 R hypothetical protein complement(1585164..1585325) Rhodopirellula baltica SH 1 1789984 NP_865313.1 CDS RB3075 NC_005027.1 1585356 1588022 R PMID: 10567266 best DB hits: BLAST: gb:AAF12630.1; AE001826_99 (AE001826) hypothetical protein; E=0.33 PFAM: PF00404; Dockerin type I repeat; E=0.54; hypothetical protein complement(1585356..1588022) Rhodopirellula baltica SH 1 1793272 NP_865314.1 CDS RB3077 NC_005027.1 1588083 1606106 R cyclic nucleotide-binding protein complement(1588083..1606106) Rhodopirellula baltica SH 1 1795986 NP_865315.1 CDS RB3097 NC_005027.1 1606106 1606459 R hypothetical protein complement(1606106..1606459) Rhodopirellula baltica SH 1 1793284 NP_865316.1 CDS RB3100 NC_005027.1 1606474 1607100 D signal peptide 1606474..1607100 Rhodopirellula baltica SH 1 1791131 NP_865317.1 CDS dnaE NC_005027.1 1607367 1610966 R PMID: 3316192 PMID: 3316192 best DB hits: BLAST: swissprot:O83675; DP3A_TREPA DNA POLYMERASE III, ALPHA CHAIN -----; E=0.0 gb:AAD44403.1; (AF062920) DNA polymerase III [Thermus aquaticus]; E=0.0 swissprot:O67125; DP3A_AQUAE DNA POLYMERASE III, ALPHA CHAIN -----; E=0.0 COG: TP0669; COG0587 DNA polymerase III alpha subunit; E=0.0 PFAM: PF02231; PHP domain N-terminal region; E=5.8e-32 PF02811; PHP domain C-terminal region; E=2e-36 PF01336; OB-fold nucleic acid binding domain; E=1.4e-08; DNA polymerase III alpha subunit complement(1607367..1610966) Rhodopirellula baltica SH 1 1791520 NP_865318.1 CDS RB3107 NC_005027.1 1611136 1611366 R hypothetical protein complement(1611136..1611366) Rhodopirellula baltica SH 1 1792810 NP_865319.1 CDS mauG NC_005027.1 1611359 1612594 D PMID: 7781769 PMID: 1657179 PMID: 8021187 best DB hits: BLAST: pir:B75584; cytochrome-c peroxidase (EC 1.11.1.5) DRA0301; E=1e-36 swissprot:Q50426; MAUG_METFL METHYLAMINE UTILIZATION PROTEIN MAUG; E=9e-36 swissprot:Q49128; MAUG_METEX METHYLAMINE UTILIZATION PROTEIN MAUG; E=2e-31 COG: DRA0301; COG1858 Cytochrome c peroxidase; E=1e-37; cytochrome-c peroxidase 1611359..1612594 Rhodopirellula baltica SH 1 1793978 NP_865320.1 CDS RB3112 NC_005027.1 1612763 1613722 D hypothetical protein 1612763..1613722 Rhodopirellula baltica SH 1 1795155 NP_865321.1 CDS RB3114 NC_005027.1 1613895 1614395 R signal peptide complement(1613895..1614395) Rhodopirellula baltica SH 1 1795456 NP_865322.1 CDS RB3116 NC_005027.1 1614449 1615129 R signal peptide complement(1614449..1615129) Rhodopirellula baltica SH 1 1795780 NP_865323.1 CDS RB3117 NC_005027.1 1615164 1615433 R hypothetical protein complement(1615164..1615433) Rhodopirellula baltica SH 1 1792072 NP_865324.1 CDS RB3118 NC_005027.1 1615430 1615828 R hypothetical protein complement(1615430..1615828) Rhodopirellula baltica SH 1 1793002 NP_865325.1 CDS RB3119 NC_005027.1 1615923 1616510 R signal peptide complement(1615923..1616510) Rhodopirellula baltica SH 1 1796163 NP_865326.1 CDS RB3123 NC_005027.1 1616646 1617944 R PMID: 98242082 best DB hits: BLAST: gb:AAF21820.1; AF098954_1 (AF098954) beta-agarase A precursor; E=1e-08 pir:T18265; endo-1,3(4)-beta-glucanase (EC 3.2.1.6) - Clostridium; E=2e-08 embl:CAC27412.1; (AJ307315) endo-1,3(4)-beta-glucanase; E=2e-08 COG: TM0024; COG2273 Beta-glucanase/Beta-glucan synthetase; E=5e-09 PFAM: PF00722; Glycosyl hydrolases family 16; E=0.15 PF02018; Cellulose binding domain; E=3.1e-05; glycosyl hydrolase- kappa-carrageenase precursor complement(1616646..1617944) Rhodopirellula baltica SH 1 1791539 NP_865327.1 CDS RB3125 NC_005027.1 1617972 1618379 R hypothetical protein complement(1617972..1618379) Rhodopirellula baltica SH 1 1794788 NP_865328.1 CDS RB3127 NC_005027.1 1618378 1618584 D hypothetical protein 1618378..1618584 Rhodopirellula baltica SH 1 1796664 NP_865329.1 CDS RB3128 NC_005027.1 1618539 1618907 R signal peptide complement(1618539..1618907) Rhodopirellula baltica SH 1 1796698 NP_865330.1 CDS RB3131 NC_005027.1 1618917 1619042 R hypothetical protein complement(1618917..1619042) Rhodopirellula baltica SH 1 1791045 NP_865331.1 CDS RB3132 NC_005027.1 1619062 1619400 R hypothetical protein complement(1619062..1619400) Rhodopirellula baltica SH 1 1793661 NP_865332.1 CDS RB3133 NC_005027.1 1619477 1620007 D hypothetical protein 1619477..1620007 Rhodopirellula baltica SH 1 1790141 NP_865333.1 CDS RB3136 NC_005027.1 1620056 1620661 R hypothetical protein complement(1620056..1620661) Rhodopirellula baltica SH 1 1796582 NP_865334.1 CDS RB3140 NC_005027.1 1620838 1621173 D hypothetical protein 1620838..1621173 Rhodopirellula baltica SH 1 1792715 NP_865335.1 CDS RB3141 NC_005027.1 1621122 1621640 R PMID: 9278503 best DB hits: BLAST: pir:C65016; hypothetical protein b2420 - Escherichia coli (strain; E=7e-04; hypothetical protein complement(1621122..1621640) Rhodopirellula baltica SH 1 1792921 NP_865336.1 CDS RB3142 NC_005027.1 1621173 1621715 D hypothetical protein 1621173..1621715 Rhodopirellula baltica SH 1 1793512 NP_865337.1 CDS RB3144 NC_005027.1 1621739 1622785 D PMID: 7607529 PMID: 9163424 PMID: 8402918 best DB hits: BLAST: swissprot:P55632; Y4QK_RHISN INTEGRASERECOMBINASE Y4QK; E=3e-39 swissprot:P55429; Y4EF_RHISN INTEGRASERECOMBINASE Y4EF; E=1e-32 prf:2115270D; integrase [Weeksella zoohelcum]; E=6e-23 COG: PAB0255; COG0582 Integrase; E=1e-20 PFAM: PF02899; Phage integrase, N-terminal S; E=0.3 PF00589; Phage integrase; E=8e-31; integrase/recombinase Y4QK 1621739..1622785 Rhodopirellula baltica SH 1 1792994 NP_865338.1 CDS RB3145 NC_005027.1 1622800 1623948 D PMID: 7607529 PMID: 9163424 best DB hits: BLAST: prf:2115270C; transposase [Weeksella zoohelcum]; E=1e-33 swissprot:P55631; Y4QJ_RHISN TRANSPOSASE Y4QJ -----; E=1e-32 swissprot:P24607; T801_PSESH TRANSPOSASE FOR INSERTION SEQUENCE; E=2e-09 PFAM: PF01096; Transcription factor S-II (TFIIS); E=0.19; transposase 1622800..1623948 Rhodopirellula baltica SH 1 1794768 NP_865339.1 CDS RB3146 NC_005027.1 1623952 1624248 D PMID: 7607529; hypothetical protein 1623952..1624248 Rhodopirellula baltica SH 1 1794499 NP_865340.1 CDS RB3147 NC_005027.1 1624334 1624840 R hypothetical protein complement(1624334..1624840) Rhodopirellula baltica SH 1 1790894 NP_865341.1 CDS RB3148 NC_005027.1 1624932 1625477 R signal peptide complement(1624932..1625477) Rhodopirellula baltica SH 1 1791042 NP_865342.1 CDS RB3149 NC_005027.1 1625576 1626070 R best DB hits: PFAM: PF02413; Domain of unknown function DUF144; E=0.11; hypothetical protein complement(1625576..1626070) Rhodopirellula baltica SH 1 1796133 NP_865343.1 CDS RB3151 NC_005027.1 1626234 1626464 R hypothetical protein complement(1626234..1626464) Rhodopirellula baltica SH 1 1796134 NP_865344.1 CDS RB3152 NC_005027.1 1626461 1626667 R hypothetical protein complement(1626461..1626667) Rhodopirellula baltica SH 1 1794689 NP_865345.1 CDS RB3153 NC_005027.1 1626681 1626911 R hypothetical protein complement(1626681..1626911) Rhodopirellula baltica SH 1 1791094 NP_865346.1 CDS RB3154 NC_005027.1 1626925 1627155 R hypothetical protein complement(1626925..1627155) Rhodopirellula baltica SH 1 1790732 NP_865347.1 CDS RB3155 NC_005027.1 1627149 1627430 R hypothetical protein complement(1627149..1627430) Rhodopirellula baltica SH 1 1793044 NP_865348.1 CDS RB3157 NC_005027.1 1627662 1629014 D PMID: 7607529 PMID: 9163424 PMID: 8402918 best DB hits: BLAST: gb:AAA88676.1; (M33633) unknown protein [Transposon Tn21]; E=1e-56 embl:CAA75043.1; (Y14748) int [Corynebacterium glutamicum]; E=4e-56 gb:AAF72980.1; AF255921_1 (AF255921) recombinase [Shigella; E=4e-56 COG: VCA0291; COG0582 Integrase; E=1e-49 PFAM: PF00589; Phage integrase; E=2.9e-32; integrase/recombinase Y4QK 1627662..1629014 Rhodopirellula baltica SH 1 1792260 NP_865349.1 CDS RB3158 NC_005027.1 1628996 1629142 D hypothetical protein 1628996..1629142 Rhodopirellula baltica SH 1 1797100 NP_865350.1 CDS RB3159 NC_005027.1 1629116 1629337 R hypothetical protein complement(1629116..1629337) Rhodopirellula baltica SH 1 1797075 NP_865351.1 CDS RB3160 NC_005027.1 1629437 1630387 R hypothetical protein complement(1629437..1630387) Rhodopirellula baltica SH 1 1792303 NP_865352.1 CDS RB3164 NC_005027.1 1630685 1633777 R PMID: 2914847 PMID: 1997423 PMID: 3066701 best DB hits: BLAST: swissprot:P21354; OM6L_CHLTR 60 KDA OUTER MEMBRANE PROTEIN,; E=9e-20 gb:AAA23119.1; (M35148) 60-kDa cysteine-rich outer membrane; E=9e-20 swissprot:P23603; OM6E_CHLTR 60 KDA OUTER MEMBRANE PROTEIN,; E=3e-19 PFAM: PF00313; 'Cold-shock' DNA-binding domain; E=0.64; hypothetical protein complement(1630685..1633777) Rhodopirellula baltica SH 1 1796238 NP_865353.1 CDS RB3171 NC_005027.1 1633849 1634319 D PMID: 10984043 best DB hits: BLAST: pir:D83643; hypothetical protein PA0015 [imported] - Pseudomonas; E=0.011 pir:F70422; hypothetical protein aq_1409 - Aquifex aeolicus -----; E=0.065 gb:AAF06042.1; AC009360_7 (AC009360) F16G16.8 [Arabidopsis; E=0.68 COG: PA0015; COG0457 TPR-repeat-containing proteins; E=0.001; hypothetical protein 1633849..1634319 Rhodopirellula baltica SH 1 1796028 NP_865354.1 CDS RB3172 NC_005027.1 1634326 1634919 R hypothetical protein complement(1634326..1634919) Rhodopirellula baltica SH 1 1793459 NP_865355.1 CDS RB3174 NC_005027.1 1634867 1636054 R PMID: 7934829 best DB hits: BLAST: swissprot:O67444; YE64_AQUAE HYPOTHETICAL PROTEIN AQ_1464 -----; E=4e-47 pir:T36871; probable pseudouridine synthase - Streptomyces; E=1e-40 swissprot:O33210; YH11_MYCTU HYPOTHETICAL 27.6 KDA PROTEIN RV1711; E=9e-38 COG: aq_1464; COG1187 16S rRNA uridine-516 pseudouridylate synthase and; E=3e-48 PFAM: PF01479; S4 domain; E=3.1e-11 PF00849; RNA pseudouridylate synthase; E=6.5e-13; ribosomal large subunit pseudouridine synthase B complement(1634867..1636054) Rhodopirellula baltica SH 1 1793329 NP_865356.1 CDS RB3176 NC_005027.1 1636311 1637498 R PMID: 8763940 PMID: 9387221 best DB hits: BLAST: swissprot:P22806; BIOF_BACSH 8-AMINO-7-OXONONANOATE SYNTHASE; E=1e-57 swissprot:P53556; BIOF_BACSU 8-AMINO-7-OXONONANOATE SYNTHASE; E=7e-57 ddbj:BAB07626.1; (AP001520) 8-amino-7-oxononanoate synthase; E=2e-51 COG: BS_bioF; COG0156 7-keto-8-aminopelargonate synthetase and related; E=6e-58 PFAM: PF01053; Cys/Met metabolism PLP-depend; E=0.00067 PF00222; Aminotransferase class-II; E=1.6e-74; 8-amino-7-oxononanoate synthase complement(1636311..1637498) Rhodopirellula baltica SH 1 1796709 NP_865357.1 CDS RB3177 NC_005027.1 1637524 1639647 R PMID: 9634230 best DB hits: BLAST: pir:F70837; probable sulfatase (EC 3.1.6.-) atsG - Mycobacterium; E=4e-25 prf:2204388A; sulphamidase [Homo sapiens]; E=1e-17 gb:AAF55607.1; (AE003724) CG14291 gene product [Drosophila; E=7e-17 COG: Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=4e-26 PA0924; COG3083 Predicted hydrolase of alkaline phosphatase; E=0.002 PFAM: PF00884; Sulfatase; E=1.3e-07; sulfatase atsG complement(1637524..1639647) Rhodopirellula baltica SH 1 1793928 NP_865358.1 CDS RB3179 NC_005027.1 1639538 1641973 R PMID: 10688204 best DB hits: BLAST: pir:B81282; probable integral membrane protein Cj1373 [imported] -; E=3e-08 pir:H71453; hypothetical protein PH0287 - Pyrococcus horikoshii; E=1e-06 pir:A75018; transport protein PAB1101 - Pyrococcus abyssi (strain; E=2e-05 COG: Cj1373; COG1033 Membrane proteins related to SecD/SecF; E=3e-09; hypothetical protein complement(1639538..1641973) Rhodopirellula baltica SH 1 1792496 NP_865359.1 CDS RB3185 NC_005027.1 1642085 1645993 R PMID: 10688204 best DB hits: BLAST: pir:E71280; probable antibiotic transport protein - syphilis; E=2e-05 pir:B81282; probable integral membrane protein Cj1373 [imported] -; E=3e-04 pir:D70131; conserved hypothetical integral membrane protein BB0252 -; E=0.003 COG: TP0790; COG1033 Membrane proteins related to SecD/SecF; E=2e-06 PFAM: PF01218; Coproporphyrinogen III oxidas; E=0.021; hypothetical protein complement(1642085..1645993) Rhodopirellula baltica SH 1 1793173 NP_865360.1 CDS RB3189 NC_005027.1 1646085 1646393 D hypothetical protein 1646085..1646393 Rhodopirellula baltica SH 1 1791294 NP_865361.1 CDS RB3190 NC_005027.1 1646093 1646326 R hypothetical protein complement(1646093..1646326) Rhodopirellula baltica SH 1 1795452 NP_865362.1 CDS RB3192 NC_005027.1 1646344 1646541 R hypothetical protein complement(1646344..1646541) Rhodopirellula baltica SH 1 1790845 NP_865363.1 CDS RB3193 NC_005027.1 1646511 1647647 D PMID: 8616240 best DB hits: BLAST: pir:T36008; probable transaldolase - Streptomyces coelicolor -----; E=7e-21 swissprot:O06812; TAL_MYCTU TRANSALDOLASE ----- pir: C70917; E=3e-17 pir:T48589; transaldolase-like protein - Arabidopsis thaliana; E=3e-17 COG: Rv1448c; COG0176 Transaldolase; E=3e-18 PFAM: PF00923; Transaldolase; E=0.78; transaldolase 1646511..1647647 Rhodopirellula baltica SH 1 1791610 NP_865364.1 CDS RB3194 NC_005027.1 1647492 1648058 R hypothetical protein complement(1647492..1648058) Rhodopirellula baltica SH 1 1790980 NP_865365.1 CDS ctpA NC_005027.1 1648239 1650068 R PMID: 8034700 PMID: 8058761 best DB hits: BLAST: pir:F70144; carboxyl-terminal processing proteinase (ctp) homolog -; E=1e-42 pir:A71677; tail-specific proteinase precursor (ctp) RP228 -; E=2e-41 pir:B83005; probable carboxyl-terminal proteinase PA5134 [imported]; E=8e-40 COG: BB0359; COG0793 Periplasmic protease; E=1e-43 PFAM: PF00515; TPR Domain; E=0.18 PF00595; PDZ domain (Also known as DHR or GLG; E=4.7e-05; carboxyl-terminal processing protease complement(1648239..1650068) Rhodopirellula baltica SH 1 1796308 NP_865366.1 CDS RB3196 NC_005027.1 1650093 1650422 D hypothetical protein 1650093..1650422 Rhodopirellula baltica SH 1 1795009 NP_865367.1 CDS RB3197 NC_005027.1 1650460 1650780 R hypothetical protein complement(1650460..1650780) Rhodopirellula baltica SH 1 1789942 NP_865368.1 CDS RB3200 NC_005027.1 1650822 1651232 R hypothetical protein complement(1650822..1651232) Rhodopirellula baltica SH 1 1795254 NP_865369.1 CDS RB3201 NC_005027.1 1651271 1651600 R hypothetical protein complement(1651271..1651600) Rhodopirellula baltica SH 1 1792228 NP_865370.1 CDS RB3202 NC_005027.1 1651616 1651732 R hypothetical protein complement(1651616..1651732) Rhodopirellula baltica SH 1 1792867 NP_865371.1 CDS RB3203 NC_005027.1 1651706 1651882 D hypothetical protein 1651706..1651882 Rhodopirellula baltica SH 1 1796666 NP_865372.1 CDS RB3205 NC_005027.1 1651849 1652079 R hypothetical protein complement(1651849..1652079) Rhodopirellula baltica SH 1 1794738 NP_865373.1 CDS RB3207 NC_005027.1 1652052 1652453 D hypothetical protein 1652052..1652453 Rhodopirellula baltica SH 1 1789985 NP_865374.1 CDS RB3208 NC_005027.1 1652111 1652398 R hypothetical protein complement(1652111..1652398) Rhodopirellula baltica SH 1 1796305 NP_865375.1 CDS RB3210 NC_005027.1 1652391 1652681 R hypothetical protein complement(1652391..1652681) Rhodopirellula baltica SH 1 1794465 NP_865376.1 CDS RB3212 NC_005027.1 1652507 1652671 R signal peptide complement(1652507..1652671) Rhodopirellula baltica SH 1 1794923 NP_865377.1 CDS RB3213 NC_005027.1 1652671 1654254 R PMID: 11823852; hypothetical protein complement(1652671..1654254) Rhodopirellula baltica SH 1 1793522 NP_865378.1 CDS speD NC_005027.1 1654251 1654745 R PMID: 11073910 best DB hits: BLAST: swissprot:Q57763; Y315_METJA HYPOTHETICAL PROTEIN MJ0315 -----; E=1e-08 pir:B75030; hypothetical protein PAB1162 - Pyrococcus abyssi (strain; E=4e-07 pir:H71215; hypothetical protein PH1992 - Pyrococcus horikoshii; E=3e-06 COG: MJ0315; COG1586 S-adenosylmethionine decarboxylase; E=1e-09 PFAM: PF02576; Uncharacterized BCR, YhbC family COG; E=0.88 PF02675; S-adenosylmethionine decarboxylase; E=1.7e-10; S-adenosylmethionine decarboxylase proenzyme complement(1654251..1654745) Rhodopirellula baltica SH 1 1791657 NP_865379.1 CDS RB3221 NC_005027.1 1654804 1656024 R best DB hits: BLAST: pir:E69789; hypothetical protein ydjI - Bacillus subtilis -----; E=3e-25 gb:AAK05447.1; AE006367_3 (AE006367) UNKNOWN PROTEIN [Lactococcus; E=6e-06 ddbj:BAB05524.1; (AP001513) BH1805~unknown conserved protein in; E=7e-05; hypothetical protein complement(1654804..1656024) Rhodopirellula baltica SH 1 1792464 NP_865380.1 CDS RB3224 NC_005027.1 1656004 1656450 D hypothetical protein 1656004..1656450 Rhodopirellula baltica SH 1 1793048 NP_865381.1 CDS RB3226 NC_005027.1 1656410 1656550 R hypothetical protein complement(1656410..1656550) Rhodopirellula baltica SH 1 1790097 NP_865382.1 CDS RB3228 NC_005027.1 1656635 1659523 D hypothetical protein 1656635..1659523 Rhodopirellula baltica SH 1 1790722 NP_865383.1 CDS RB3232 NC_005027.1 1659575 1660978 D hypothetical protein 1659575..1660978 Rhodopirellula baltica SH 1 1794436 NP_865384.1 CDS RB3233 NC_005027.1 1661003 1661179 R hypothetical protein complement(1661003..1661179) Rhodopirellula baltica SH 1 1792450 NP_865385.1 CDS RB3234 NC_005027.1 1661176 1662120 R PMID: 1482681 best DB hits: BLAST: embl:CAB59581.1; (AL132662) possible gluconolactonase precursor; E=2e-26 pir:A75539; probable gluconolactonase - Deinococcus radiodurans; E=8e-20 pir:B82698; gluconolactonase precursor XF1297 [imported] - Xylella; E=8e-16 COG: DR0277; COG3386 Uncharacterized protein; E=8e-21; gluconolactonase precursor complement(1661176..1662120) Rhodopirellula baltica SH 1 1794342 NP_865386.1 CDS RB3236 NC_005027.1 1662038 1663570 R PMID: 9923682 PMID: 7890707 best DB hits: BLAST: pir:E71961; probable transporter - Helicobacter pylori (strain J99); E=2e-51 pir:F64546; sodium-dependent transporter - Helicobacter pylori; E=8e-51 ddbj:BAA96091.1; (AB043024) sodium sulfate or dicarboxylate; E=1e-45 COG: jhp0200; COG0471 Di- and tricarboxylate transporters; E=2e-52 PAB1107; COG1055 Na+/H+ antiporter NhaD and related arsenite; E=0.001 sll0640; COG0471 Di- and tricarboxylate transporters; E=0.006 PFAM: PF00939; Sodium:sulfate symporter transm; E=1.6e-12; transporter complement(1662038..1663570) Rhodopirellula baltica SH 1 1794564 NP_865387.1 CDS RB3237 NC_005027.1 1663567 1664016 R best DB hits: BLAST: pir:S34725; regulation protein - Serratia marcescens ----- embl:; E=3e-14 swissprot:P11555; FUCU_ECOLI FUCOSE OPERON FUCU PROTEIN -----; E=0.017 pir:H82496; ribose ABC transporter protein VCA0127 [imported] -; E=0.37 COG: fucU; COG1869 Uncharacterized components of ribose/xylose transport; E=0.002; hypothetical protein complement(1663567..1664016) Rhodopirellula baltica SH 1 1792641 NP_865388.1 CDS RB3239 NC_005027.1 1664080 1664898 R best DB hits: BLAST: swissprot:Q9WYP7; Y416_THEMA HYPOTHETICAL PROTEIN TM0416 -----; E=4e-13 swissprot:O50580; DT3E_PSECI D-TAGATOSE 3-EPIMERASE -----; E=8e-11 swissprot:P73599; YD04_SYNY3 HYPOTHETICAL 32.8 KDA PROTEIN SLL1304; E=4e-10 COG: TM0416; COG1082 Predicted endonucleases; E=4e-14; D-tagatose 3-epimerase complement(1664080..1664898) Rhodopirellula baltica SH 1 1794391 NP_865389.1 CDS fkpA NC_005027.1 1665040 1665639 D PMID: 7540828 PMID: 8878048 best DB hits: BLAST: gb:AAK03433.1; (AE006173) SlyD [Pasteurella multocida]; E=9e-21 gb:AAC45696.1; (U92229) macrophage infectivity potentiator; E=5e-19 swissprot:P44760; FKBY_HAEIN PROBABLE FKBP-TYPE PEPTIDYL-PROLYL; E=1e-18 COG: HI0574; COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1; E=9e-20 PFAM: PF00254; FKBP-type peptidyl-prolyl cis-trans; E=8.4e-32; FKBP-type peptidylprolyl isomerase 1665040..1665639 Rhodopirellula baltica SH 1 1793112 NP_865390.1 CDS RB3242 NC_005027.1 1665732 1667051 R PMID: 12024217; hypothetical protein complement(1665732..1667051) Rhodopirellula baltica SH 1 1791350 NP_865391.1 CDS RB3244 NC_005027.1 1666949 1667233 R hypothetical protein complement(1666949..1667233) Rhodopirellula baltica SH 1 1797007 NP_865392.1 CDS RB3245 NC_005027.1 1667272 1668279 D PMID: 11298281 best DB hits: BLAST: gb:AAF81068.1; AF223364_3 (AF223364) protein phosphatase 1; E=3e-27 pir:E71538; hypothetical protein CT259 - Chlamydia trachomatis; E=5e-26 embl:CAA10712.1; (AJ132604) pppL protein [Lactococcus lactis]; E=2e-25 COG: CT259; COG0631 Protein serine/threonine phosphatases; E=4e-27 PFAM: PF00481; Protein phosphatase 2C; E=1.2e-09; protein phosphatase 1 1667272..1668279 Rhodopirellula baltica SH 1 1792836 NP_865393.1 CDS RB3247 NC_005027.1 1668390 1668665 R hypothetical protein complement(1668390..1668665) Rhodopirellula baltica SH 1 1790200 NP_865394.1 CDS RB3248 NC_005027.1 1668660 1670687 D best DB hits: BLAST: pir:G83038; probable sensorresponse regulator hybrid PA4856; E=0.74; hypothetical protein 1668660..1670687 Rhodopirellula baltica SH 1 1793248 NP_865395.1 CDS RB3251 NC_005027.1 1670684 1672903 D PMID: 8905231 best DB hits: BLAST: pir:S76102; hypothetical protein slr0359 - Synechocystis sp. (strain; E=3e-99 pir:S76238; hypothetical protein sll0267 - Synechocystis sp. (strain; E=2e-89 pir:S77565; hypothetical protein slr2077 - Synechocystis sp. (strain; E=5e-88 COG: PA0575_4; COG2200 Diguanylate cyclase/phosphodiesterase domain 2; E=1e-59 PFAM: PF00900; Ribosomal family S4e; E=0.72 PF00072; Response regulator receiver dom; E=3.8e-29 PF00785; PAC motif; E=0.054; hypothetical protein 1670684..1672903 Rhodopirellula baltica SH 1 1790903 NP_865396.1 CDS RB3252 NC_005027.1 1672993 1673976 R hypothetical protein complement(1672993..1673976) Rhodopirellula baltica SH 1 1794369 NP_865397.1 CDS RB3253 NC_005027.1 1673976 1675049 R best DB hits: BLAST: ddbj:BAA75396.1; (AB013378) YhaQ [Bacillus halodurans]; E=1e-38 pir:T36523; probable ABC-type transport system ATP-binding protein -; E=2e-38 ddbj:BAB04722.1; (AP001510) ABC transporter (ATP-binding protein); E=4e-38 COG: BH1003; COG1131 ABC-type multidrug transport system, ATPase; E=3e-39 PFAM: PF01495; HypB/UreG nucleotide-binding; E=0.28 PF02223; Thymidylate kinase; E=0.38 PF00005; ABC transporter; E=2.4e-41; ABC transporter ATP-binding protein complement(1673976..1675049) Rhodopirellula baltica SH 1 1790298 NP_865398.1 CDS argJ NC_005027.1 1675178 1676410 D bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 1675178..1676410 Rhodopirellula baltica SH 1 1793836 NP_865399.1 CDS RB3256 NC_005027.1 1676574 1676996 D PMID: 12004073; hypothetical protein 1676574..1676996 Rhodopirellula baltica SH 1 1794957 NP_865400.1 CDS RB3257 NC_005027.1 1677159 1677374 D PMID: 11932238; hypothetical protein 1677159..1677374 Rhodopirellula baltica SH 1 1791631 NP_865401.1 CDS RB3258 NC_005027.1 1677173 1677397 R hypothetical protein complement(1677173..1677397) Rhodopirellula baltica SH 1 1795721 NP_865402.1 CDS RB3259 NC_005027.1 1677371 1677556 D hypothetical protein 1677371..1677556 Rhodopirellula baltica SH 1 1796119 NP_865403.1 CDS RB3260 NC_005027.1 1677574 1677798 R hypothetical protein complement(1677574..1677798) Rhodopirellula baltica SH 1 1791689 NP_865404.1 CDS RB3261 NC_005027.1 1677717 1678001 R hypothetical protein complement(1677717..1678001) Rhodopirellula baltica SH 1 1791864 NP_865405.1 CDS RB3262 NC_005027.1 1678132 1678518 D PMID: 10952301 best DB hits: BLAST: pir:F82405; glyoxylase I family protein VCA0890 [imported] - Vibrio; E=0.41 PFAM: PF00903; Glyoxalase/Bleomycin resistance pr; E=0.0022; glyoxylase I family protein 1678132..1678518 Rhodopirellula baltica SH 1 1792587 NP_865406.1 CDS gfo NC_005027.1 1678635 1679711 R PMID: 1537789 PMID: 8472911 PMID: 8994968 best DB hits: BLAST: embl:CAB02496.1; (Z80356) glucose-fructose oxidoreductase; E=5e-07 pdb:1OFG; A Chain A, Glucose-Fructose Oxidoreductase -----; E=5e-07 pdb:1EVJ; A Chain A, Crystal Structure Of Glucose-Fructose; E=5e-07 COG: BH1248; COG0673 Predicted dehydrogenases and related proteins; E=1e-06 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=5.1e-14 PF00431; CUB domain; E=0.64; glucose-fructose oxidoreductase complement(1678635..1679711) Rhodopirellula baltica SH 1 1792548 NP_865407.1 CDS rluD NC_005027.1 1679865 1680830 R best DB hits: BLAST: swissprot:Q45480; YLYB_BACSU HYPOTHETICAL 33.7 KD PROTEIN IN; E=4e-31 swissprot:P50513; RLUD_ZYMMO RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE; E=2e-30 ddbj:BAB06261.1; (AP001515) BH2542~unknown conserved protein; E=3e-30 COG: BH2542; COG0564 Pseudouridylate synthases, 23S RNA-specific; E=3e-31 PFAM: PF01479; S4 domain; E=5.2e-10 PF00849; RNA pseudouridylate synthase; E=6.4e-30; ribosomal large subunit pseudouridine synthase D complement(1679865..1680830) Rhodopirellula baltica SH 1 1795339 NP_865408.1 CDS RB3267 NC_005027.1 1680916 1682214 R hypothetical protein complement(1680916..1682214) Rhodopirellula baltica SH 1 1796989 NP_865409.1 CDS RB3268 NC_005027.1 1682308 1683003 R hypothetical protein complement(1682308..1683003) Rhodopirellula baltica SH 1 1791517 NP_865410.1 CDS pknB NC_005027.1 1683018 1684001 D PMID: 8969512 best DB hits: BLAST: gb:AAF73695.1; (AE002226) serinethreonine-protein kinase; E=6e-30 pir:G71532; probable threoninetyrosine-specific protein kinase (EC; E=3e-29 gb:AAF73573.1; (AE002326) serinethreonine protein kinase; E=1e-28 COG: CT301_1; COG0515 Serine/threonine protein kinases; E=3e-30 PFAM: PF00069; Protein kinase domain; E=0.0026; serine/threonine-protein kinase pknB 1683018..1684001 Rhodopirellula baltica SH 1 1794851 NP_865411.1 CDS gyrB NC_005027.1 1683998 1684729 D PMID: 8863738 best DB hits: BLAST: gb:AAF89615.1; AF167433_1 (AF167433) gyrase B [Thermus; E=5e-18 pir:JC4960; DNA topoisomerase (ATP-hydrolyzing) (EC 5.99.1.3) B -; E=1e-16 swissprot:P77993; GYRB_THEMA DNA GYRASE SUBUNIT B (TOPOISOMERASE; E=1e-16 COG: TM0833; COG0187 DNA gyrase (topoisomerase II) B subunit; E=1e-17 PFAM: PF01751; Toprim domain; E=0.81; DNA gyrase subunit B 1683998..1684729 Rhodopirellula baltica SH 1 1792194 NP_865412.1 CDS RB3274 NC_005027.1 1684712 1685734 R PMID: 9278503 best DB hits: BLAST: pir:E65030; hypothetical protein b2534 - Escherichia coli (strain; E=3e-07 gb:AAG57647.1; AE005483_6 (AE005483) enzyme (3.4.-); E=3e-07 gb:AAF51169.1; (AE003581) Bem46 gene product [Drosophila; E=2e-06 COG: yfhR; COG1073 Hydrolases of the alpha/beta superfamily; E=3e-08 VC1451; COG2931 RTX toxins and related Ca2+-binding proteins; E=0.001 PA3695; COG1073 Hydrolases of the alpha/beta superfamily; E=0.004 PFAM: PF00561; alpha/beta hydrolase fold; E=0.37; hypothetical protein complement(1684712..1685734) Rhodopirellula baltica SH 1 1793078 NP_865413.1 CDS RB3276 NC_005027.1 1685794 1686438 D hypothetical protein 1685794..1686438 Rhodopirellula baltica SH 1 1795834 NP_865414.1 CDS RB3277 NC_005027.1 1685887 1686552 R hypothetical protein complement(1685887..1686552) Rhodopirellula baltica SH 1 1795046 NP_865415.1 CDS RB3280 NC_005027.1 1686539 1686862 R hypothetical protein complement(1686539..1686862) Rhodopirellula baltica SH 1 1790545 NP_865416.1 CDS hup NC_005027.1 1686853 1687272 R PMID: 1644313 PMID: 7765961 PMID: 6300069 PMID: 3566914 PMID: 6540370 PMID: 7500343 best DB hits: BLAST: swissprot:P02346; DBH_BACST DNA-BINDING PROTEIN II (HB) (HU); E=2e-13 prf:1702428A; DNA binding protein HU [Bacillus caldolyticus]; E=1e-12 swissprot:P08821; DBH_BACSU DNA-BINDING PROTEIN II (HB) (HU); E=4e-12 COG: BS_hbs; COG0776 Bacterial nucleoid DNA-binding protein; E=4e-13 PFAM: PF00216; Bacterial DNA-binding protein; E=2.5e-29; DNA-binding protein HU complement(1686853..1687272) Rhodopirellula baltica SH 1 1793753 NP_865417.1 CDS RB3283 NC_005027.1 1687415 1687864 R PMID: 9923682 best DB hits: BLAST: swissprot:Q9ZMG1; Y274_HELPJ HYPOTHETICAL PROTEIN HP0274JHP0259; E=8e-18 swissprot:P56132; Y274_HELPY HYPOTHETICAL PROTEIN HP0274 -----; E=3e-16 pir:C81395; hypothetical protein Cj0496 [imported] - Campylobacter; E=1e-13 COG: jhp0259; COG0727 Predicted Fe-S-cluster oxidoreductase; E=7e-19; hypothetical protein complement(1687415..1687864) Rhodopirellula baltica SH 1 1793634 NP_865418.1 CDS RB3285 NC_005027.1 1687874 1688008 D hypothetical protein 1687874..1688008 Rhodopirellula baltica SH 1 1790043 NP_865419.1 CDS RB3286 NC_005027.1 1688005 1688130 R hypothetical protein complement(1688005..1688130) Rhodopirellula baltica SH 1 1790948 NP_865420.1 CDS cysA NC_005027.1 1688084 1689667 D PMID: 2188958 best DB hits: BLAST: gb:AAF43869.1; AF166114_81 (AF166114) probable transport protein; E=3e-22 gb:AAG19353.1; (AE005030) spermidineputrescine ABC transporter; E=7e-22 pir:B81966; probable ABC transport ATP-binding protein NMA0485; E=7e-22 COG: VNG0921G; COG1130 ABC-type sugar/spermidine/putrescine transport; E=6e-23 NMB1966; COG1127 Uncharacterized ABC-type transport system, ATPase; E=9e-23 slr1455; COG1118 ABC-type sulfate/molybdate transport systems,; E=3e-22 PFAM: PF01078; Magnesium chelatase, subunit Chl; E=0.58 PF00005; ABC transporter; E=2.1e-43 PF02405; Domain of unknown function DUF14; E=7.9e-07; sulfate ABC transport ATP-binding protein 1688084..1689667 Rhodopirellula baltica SH 1 1796799 NP_865421.1 CDS RB3291 NC_005027.1 1689687 1689857 D hypothetical protein 1689687..1689857 Rhodopirellula baltica SH 1 1791601 NP_865422.1 CDS bioA NC_005027.1 1689919 1691202 D PMID: 3058702 best DB hits: BLAST: gb:AAG53588.1; AF248314_3 (AF248314) DAPA aminotransferase BioA; E=2e-95 swissprot:P53656; BIOA_ERWHE; E=3e-92 gb:AAG60578.1; AF250776_2 (AF250776) DAPA-aminotransferase BioA; E=3e-91 COG: bioA; COG0161 Adenosylmethionine-8-amino-7-oxononanoate; E=3e-92 PFAM: PF00202; Aminotransferase class-III; E=3e-129; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1689919..1691202 Rhodopirellula baltica SH 1 1794480 NP_865423.1 CDS RB3293 NC_005027.1 1691190 1692062 R hypothetical protein complement(1691190..1692062) Rhodopirellula baltica SH 1 1792171 NP_865424.1 CDS RB3295 NC_005027.1 1692259 1692681 R signal peptide complement(1692259..1692681) Rhodopirellula baltica SH 1 1792352 NP_865425.1 CDS RB3298 NC_005027.1 1692678 1692797 R hypothetical protein complement(1692678..1692797) Rhodopirellula baltica SH 1 1796591 NP_865426.1 CDS RB3299 NC_005027.1 1692925 1693917 R best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein complement(1692925..1693917) Rhodopirellula baltica SH 1 1796237 NP_865427.1 CDS RB3301 NC_005027.1 1694056 1694208 R hypothetical protein complement(1694056..1694208) Rhodopirellula baltica SH 1 1791174 NP_865428.1 CDS RB3302 NC_005027.1 1694269 1694481 R hypothetical protein complement(1694269..1694481) Rhodopirellula baltica SH 1 1794859 NP_865429.1 CDS RB3303 NC_005027.1 1694447 1695709 R PMID: 9371463 best DB hits: BLAST: pir:B69061; hypothetical protein MTH1458 - Methanobacterium; E=9e-51 PFAM: PF00633; Helix-hairpin-helix motif.; E=0.049; hypothetical protein complement(1694447..1695709) Rhodopirellula baltica SH 1 1792421 NP_865430.1 CDS RB3304 NC_005027.1 1695663 1695842 R hypothetical protein complement(1695663..1695842) Rhodopirellula baltica SH 1 1795810 NP_865431.1 CDS RB3305 NC_005027.1 1695825 1697258 D hypothetical protein 1695825..1697258 Rhodopirellula baltica SH 1 1791813 NP_865432.1 CDS RB3309 NC_005027.1 1697377 1699431 D PMID: 8020961 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=3e-39 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=3e-33 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=9e-32 COG: aslA; COG3119 Arylsulfatase A and related enzymes; E=1e-19 VC2041; COG3083 Predicted hydrolase of alkaline phosphatase; E=0.007 PFAM: PF00884; Sulfatase; E=4.4e-58; N-acetylgalactosamine 6-sulfatase (GALNS) 1697377..1699431 Rhodopirellula baltica SH 1 1790352 NP_865433.1 CDS RB3312 NC_005027.1 1699428 1700390 D catalyzes the formation of 2-dehydropantoate from (R)-pantoate; 2-dehydropantoate 2-reductase 1699428..1700390 Rhodopirellula baltica SH 1 1795904 NP_865434.1 CDS RB3313 NC_005027.1 1700394 1702646 R PMID: 10952301 best DB hits: BLAST: pir:E82042; conserved hypothetical protein VC2716 [imported] -; E=0.0 swissprot:P57072; YHGF_NEIMA HYPOTHETICAL PROTEIN NMA0194 -----; E=1e-179 swissprot:P71353; YHGF_HAEIN HYPOTHETICAL PROTEIN HI0568 -----; E=1e-177 COG: VC2716; COG2183 Predicted RNA binding protein, contains S1 domain; E=0.0 Rv1630; COG0539 Ribosomal protein S1; E=2e-06 BS_comEA; COG1555 DNA uptake protein and related DNA-binding; E=3e-06 PFAM: PF00633; Helix-hairpin-helix motif.; E=0.51 PF00575; S1 RNA binding domain; E=4.4e-25; RNA binding protein complement(1700394..1702646) Rhodopirellula baltica SH 1 1795603 NP_865435.1 CDS ftsH NC_005027.1 1702618 1703202 R PMID: 8444796 best DB hits: BLAST: pir:F72009; cell division protein FtsH, probable CP0857 [imported] -; E=2e-04 pir:D71463; probable ATP-dependent zinc proteinase - Chlamydia; E=4e-04 pir:F81725; cell division protein FtsH, probable TC0229 [imported] -; E=5e-04 COG: CPn0998; COG0465 ATP-dependent Zn proteases; E=2e-05 PFAM: PF01434; Peptidase M41; E=0.4; cell division protein FtsH complement(1702618..1703202) Rhodopirellula baltica SH 1 1791490 NP_865436.1 CDS RB3317 NC_005027.1 1703379 1704821 D PMID: 9584149 best DB hits: BLAST: gb:AAC23913.1; (AF039207) NADH-dependent dehydrogenase homolog; E=3e-13 pir:B72359; lipopolysaccharide biosynthesis protein BplA -; E=2e-12 embl:CAC24034.1; (AL512980) ORF-c34_017 [Sulfolobus solfataricus]; E=2e-08 COG: TM0585; COG0673 Predicted dehydrogenases and related proteins; E=2e-13 PFAM: PF01408; Oxidoreductase, NAD-bin; E=1.1e-12; NADH-dependent dehydrogenase-like protein 1703379..1704821 Rhodopirellula baltica SH 1 1790641 NP_865437.1 CDS RB3320 NC_005027.1 1704965 1706551 D PMID: 11481432; signal peptide 1704965..1706551 Rhodopirellula baltica SH 1 1791063 NP_865438.1 CDS RB3321 NC_005027.1 1706568 1706927 R PMID: 10952301 best DB hits: BLAST: pir:F82461; conserved hypothetical protein VCA0415 [imported] -; E=3e-33 gb:AAB81981.1; (AF025662) unknown [Vibrio cholerae]; E=1e-32 pir:A82473; conserved hypothetical protein VCA0338 [imported] -; E=4e-32 COG: VCA0415; COG3324 Uncharacterized BCR; E=3e-34 PFAM: PF00903; Glyoxalase/Bleomycin resistance pr; E=0.00045; hypothetical protein complement(1706568..1706927) Rhodopirellula baltica SH 1 1792204 NP_865439.1 CDS RB3322 NC_005027.1 1707004 1709979 R PMID: 2544196 best DB hits: BLAST: swissprot:P56205; CYC_ASPNG CYTOCHROME C ----- pir: A61490; E=0.005 pir:S41568; cytochrome c - Emericella nidulans; E=0.025 swissprot:P38091; CYC_EMENI CYTOCHROME C ----- gb: AAB50255.1; E=0.025 PFAM: PF00034; Cytochrome c; E=0.0014; cytochrome c complement(1707004..1709979) Rhodopirellula baltica SH 1 1796144 NP_865440.1 CDS RB3324 NC_005027.1 1709976 1711454 R PMID: 12004073; signal peptide complement(1709976..1711454) Rhodopirellula baltica SH 1 1796711 NP_865441.1 CDS RB3326 NC_005027.1 1711353 1711640 D hypothetical protein 1711353..1711640 Rhodopirellula baltica SH 1 1794140 NP_865442.1 CDS RB3327 NC_005027.1 1711372 1711680 D hypothetical protein 1711372..1711680 Rhodopirellula baltica SH 1 1794708 NP_865443.1 CDS RB3328 NC_005027.1 1711598 1711795 D hypothetical protein 1711598..1711795 Rhodopirellula baltica SH 1 1794290 NP_865444.1 CDS RB3329 NC_005027.1 1711743 1711937 R hypothetical protein complement(1711743..1711937) Rhodopirellula baltica SH 1 1790583 NP_865445.1 CDS RB3330 NC_005027.1 1711966 1713321 R PMID: 10484179 best DB hits: BLAST: ddbj:BAB05939.1; (AP001514) dehydrogenase [Bacillus halodurans]; E=1e-06 swissprot:O05389; YRBE_BACSU HYPOTHETICAL 37.8 KDA PROTEIN IN; E=3e-05 swissprot:Q44258; CBAC_ALCSB 1-CARBOXY-3-CHLORO-3,4-DIHYDROXYCYCLO; E=6e-05 COG: BH2220; COG0673 Predicted dehydrogenases and related proteins; E=1e-07 PFAM: PF01408; Oxidoreductase, NAD-bin; E=4.6e-08; dehydrogenase complement(1711966..1713321) Rhodopirellula baltica SH 1 1791844 NP_865446.1 CDS RB3332 NC_005027.1 1713290 1713472 D hypothetical protein 1713290..1713472 Rhodopirellula baltica SH 1 1793236 NP_865447.1 CDS RB3333 NC_005027.1 1713409 1713528 D hypothetical protein 1713409..1713528 Rhodopirellula baltica SH 1 1790315 NP_865448.1 CDS RB3337 NC_005027.1 1713525 1713749 R hypothetical protein complement(1713525..1713749) Rhodopirellula baltica SH 1 1792795 NP_865449.1 CDS idh NC_005027.1 1713739 1714893 R PMID: 1761221 PMID: 112095 best DB hits: BLAST: ddbj:BAA97119.1; (AB035122); E=9e-09 pir:S76068; hypothetical protein - Synechocystis sp. (strain PCC; E=3e-08 swissprot:P26935; MI2D_BACSU MYO-INOSITOL 2-DEHYDROGENASE -----; E=1e-07 COG: slr0338; COG0673 Predicted dehydrogenases and related proteins; E=3e-09 PFAM: PF01408; Oxidoreductase, NAD-bin; E=6.7e-37; myo-inositol 2-dehydrogenase complement(1713739..1714893) Rhodopirellula baltica SH 1 1791373 NP_865450.1 CDS RB3340 NC_005027.1 1714857 1715687 R PMID: 8747459 best DB hits: BLAST: swissprot:O31458; YBFT_BACSU HYPOTHETICAL 27.3 KD PROTEIN IN; E=2e-44 swissprot:O35000; NAGB_BACSU GLUCOSAMINE-6-PHOSPHATE ISOMERASE; E=6e-43 swissprot:O97440; GNP2_GIALA GLUCOSAMINE-6-PHOSPHATE ISOMERASE 2; E=6e-41 COG: BS_ybfT; COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate; E=2e-45 PFAM: PF01182; Glucosamine-6-phosphate isome; E=3.7e-76; glucosamine-6-phosphate isomerase 2 complement(1714857..1715687) Rhodopirellula baltica SH 1 1792291 NP_865451.1 CDS RB3342 NC_005027.1 1715684 1716496 R best DB hits: BLAST: gb:AAC14880.1; (AF060080) hypothetical protein [Chlorobium; E=8e-12 embl:CAA77139.1; (Y18353) hypothetical protein [Thermus; E=4e-09 pir:C75001; hypothetical protein PAB1341 - Pyrococcus abyssi (strain; E=4e-09 COG: PAB1341; COG2120 Uncharacterized proteins, LmbE homologs; E=4e-10 PFAM: PF02585; Uncharacterized LmbE-like protein, C; E=8.8e-12; hypothetical protein complement(1715684..1716496) Rhodopirellula baltica SH 1 1794849 NP_865452.1 CDS RB3345 NC_005027.1 1716741 1717643 D PMID: 9666063 best DB hits: BLAST: pir:G83352; transcriptional regulator MtlR PA2337 [imported] -; E=3e-30 gb:AAC34292.1; (AF047527) activator protein [Pseudomonas; E=2e-26 pir:G82221; transcriptional regulator AraCXylS family VC1260; E=2e-16 COG: PA2337; COG2207 AraC-type DNA-binding domain-containing proteins; E=3e-31 PFAM: PF00165; Bacterial regulatory helix-turn-heli; E=3.5e-21; activator protein MtlR 1716741..1717643 Rhodopirellula baltica SH 1 1796121 NP_865453.1 CDS RB3346 NC_005027.1 1717654 1719357 R best DB hits: PFAM: PF02369; Bacterial Ig-like domain (group 1); E=0.48; signal peptide complement(1717654..1719357) Rhodopirellula baltica SH 1 1797103 NP_865454.1 CDS RB3348 NC_005027.1 1719459 1720634 R PMID: 1723410 PMID: 1400260 best DB hits: BLAST: pir:S75649; renin-binding protein-related protein - Synechocystis; E=1e-68 pdb:1FP3; A Chain A, Crystal Structure Of N-Acyl-D-Glucosamine; E=4e-54 swissprot:P51607; RNBP_RAT N-ACYLGLUCOSAMINE 2-EPIMERASE (GLCNAC; E=2e-53 COG: slr1975; COG2942 N-acyl-D-glucosamine 2-epimerase; E=1e-69; N-acylglucosamine 2-epimerase complement(1719459..1720634) Rhodopirellula baltica SH 1 1792318 NP_865455.1 CDS RB3349 NC_005027.1 1720638 1723328 R PMID: 8905231 best DB hits: BLAST: pir:S75887; hypothetical protein - Synechocystis sp. (strain PCC; E=4e-40 gb:AAF54633.1; (AE003691) CG6723 gene product [Drosophila; E=5e-32 swissprot:Q9XT77; SL56_RABIT SODIUM-DEPENDENT MULTIVITAMIN; E=6e-32 COG: sll1087; COG0591 Na+/proline, Na+/panthothenate symporters and; E=4e-41 RP571; COG0591 Na+/proline, Na+/panthothenate symporters and related; E=4e-13 BH2222; COG0591 Na+/proline, Na+/panthothenate symporters and; E=3e-12 PFAM: PF01344; Kelch motif; E=0.014 PF00474; Sodium:solute symporter family; E=1.5e-11; sodium:solute symporter complement(1720638..1723328) Rhodopirellula baltica SH 1 1792223 NP_865456.1 CDS nanA NC_005027.1 1723325 1724293 R PMID: 8081752 PMID: 3909108 PMID: 10952301 best DB hits: BLAST: pir:E82157; probable N-acetylneuraminate lyase VC1776 [imported] -; E=2e-39 embl:CAC27797.1; (AJ271330) acylneuraminate lyase [Sus scrofa]; E=7e-36 gb:AAG18989.1; (AE004999) dihydrodipicolinate synthase; DapA; E=2e-18 COG: VC1776; COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate; E=2e-40 PFAM: PF00701; Dihydrodipicolinate synthetase famil; E=2.7e-23; N-acetylneuraminate lyase complement(1723325..1724293) Rhodopirellula baltica SH 1 1792566 NP_865457.1 CDS RB3353 NC_005027.1 1724290 1725519 R PMID: 1400240 PMID: 8591030 best DB hits: BLAST: swissprot:Q02834; NANH_MICVI SIALIDASE PRECURSOR (NEURAMINIDASE); E=3e-40 pdb:1EUR; Sialidase ----- pdb: 1EUS Sialidase Complexed; E=3e-40 pdb:1EUU; Sialidase Or Neuraminidase, Large 68kd Form -----; E=3e-40 PFAM: PF02012; BNR repeat; E=0.1; sialidase [precursor] complement(1724290..1725519) Rhodopirellula baltica SH 1 1792895 NP_865458.1 CDS RB3354 NC_005027.1 1725578 1725703 D hypothetical protein 1725578..1725703 Rhodopirellula baltica SH 1 1790578 NP_865459.1 CDS RB3355 NC_005027.1 1725716 1727881 D PMID: 8021188 best DB hits: BLAST: swissprot:Q50233; MAUG_METME METHYLAMINE UTILIZATION PROTEIN MAUG; E=2e-05 pir:B82367; cytochrome-c peroxidase (EC 1.11.1.5) VC0089; E=4e-05 swissprot:Q50426; MAUG_METFL METHYLAMINE UTILIZATION PROTEIN MAUG; E=1e-04 COG: VC0089; COG1858 Cytochrome c peroxidase; E=4e-06; methylamine utilization protein mauG 1725716..1727881 Rhodopirellula baltica SH 1 1792943 NP_865460.1 CDS RB3358 NC_005027.1 1727856 1727969 R hypothetical protein complement(1727856..1727969) Rhodopirellula baltica SH 1 1797079 NP_865461.1 CDS RB3359 NC_005027.1 1727941 1728156 R hypothetical protein complement(1727941..1728156) Rhodopirellula baltica SH 1 1794921 NP_865462.1 CDS RB3360 NC_005027.1 1727957 1728256 D hypothetical protein 1727957..1728256 Rhodopirellula baltica SH 1 1796954 NP_865463.1 CDS RB3362 NC_005027.1 1728283 1728546 R hypothetical protein complement(1728283..1728546) Rhodopirellula baltica SH 1 1794011 NP_865464.1 CDS RB3363 NC_005027.1 1728617 1730041 D PMID: 2000090 PMID: 8552028 best DB hits: BLAST: pir:S77202; sensory transduction histidine kinase sll1687 -; E=1e-09 swissprot:Q46791; YGEK_ECOLI HYPOTHETICAL TRANSCRIPTIONAL; E=5e-07 swissprot:P23221; FIXJ_BRAJA transcriptional regulator; E=5e-07 COG: sll1687_1; COG2202 PAS/PAC domain; E=1e-10 ygeK; COG2771 DNA-binding HTH domains; E=4e-08 sll0779_1; COG2202 PAS/PAC domain; E=2e-07 PFAM: PF00989; PAS domain; E=0.032 PF00785; PAC motif; E=4.6e-09 PF00196; Bacterial regulatory proteins, luxR; E=1.4e-19; transcriptional regulator fixJ 1728617..1730041 Rhodopirellula baltica SH 1 1790316 NP_865465.1 CDS RB3365 NC_005027.1 1730124 1730255 D hypothetical protein 1730124..1730255 Rhodopirellula baltica SH 1 1795599 NP_865466.1 CDS RB3366 NC_005027.1 1730380 1730616 D hypothetical protein 1730380..1730616 Rhodopirellula baltica SH 1 1790609 NP_865467.1 CDS RB3367 NC_005027.1 1730753 1732018 R PMID: 9537320 best DB hits: BLAST: pir:H70355; hypothetical protein aq_627 - Aquifex aeolicus -----; E=1e-09 ddbj:BAA09665.1; (D63341) XylN outer membrane protein; E=3e-09 ddbj:BAA12149.1; (D83955) outer membrane protein [Pseudomonas; E=1e-08 COG: aq_627; COG2067 Long-chain fatty acid transport protein; E=1e-10; hypothetical protein complement(1730753..1732018) Rhodopirellula baltica SH 1 1790999 NP_865468.1 CDS RB3369 NC_005027.1 1731972 1732190 D hypothetical protein 1731972..1732190 Rhodopirellula baltica SH 1 1790112 NP_865469.1 CDS RB3370 NC_005027.1 1732176 1732355 R hypothetical protein complement(1732176..1732355) Rhodopirellula baltica SH 1 1796601 NP_865470.1 CDS RB3371 NC_005027.1 1732288 1733667 R PMID: 9634230 best DB hits: BLAST: swissprot:Q10552; Y893_MYCTU HYPOTHETICAL 36.1 KDA PROTEIN RV0893C; E=3e-10 swissprot:Q50726; YX99_MYCTU HYPOTHETICAL 38.1 KDA PROTEIN RV3399; E=2e-08 pir:A70645; hypothetical protein Rv0726c - Mycobacterium; E=6e-08 COG: Rv0893c; COG3315 O-Methyltransferase involved in polyketide; E=3e-11 PFAM: PF02409; Domain of unknown function DUF142; E=7e-05; hypothetical protein complement(1732288..1733667) Rhodopirellula baltica SH 1 1791690 NP_865471.1 CDS RB3372 NC_005027.1 1733666 1734013 D hypothetical protein 1733666..1734013 Rhodopirellula baltica SH 1 1791997 NP_865472.1 CDS RB3373 NC_005027.1 1734042 1740038 D PMID: 9098081 best DB hits: BLAST: pir:T28655; receptor-like histidine kinase BpdS - Rhodococcus sp; E=1e-60 pir:T30898; receptor-like histidine kinase - Rhodococcus erythropolis; E=1e-60 pir:S75136; sensory transduction histidine kinase slr2104 -; E=9e-58 COG: VC1349_2; COG0642 Sensory transduction histidine kinases; E=1e-41 PFAM: PF00069; Protein kinase domain; E=8.1e-08 PF00515; TPR Domain; E=0.026 PF00512; His Kinase A (phosphoacceptor); E=1.4e-21; receptor-like histidine kinase BpdS 1734042..1740038 Rhodopirellula baltica SH 1 1792394 NP_865473.1 CDS RB3374 NC_005027.1 1740063 1740350 R hypothetical protein complement(1740063..1740350) Rhodopirellula baltica SH 1 1797123 NP_865474.1 CDS RB3375 NC_005027.1 1740070 1740198 R hypothetical protein complement(1740070..1740198) Rhodopirellula baltica SH 1 1793503 NP_865475.1 CDS RB3376 NC_005027.1 1740244 1742316 D PMID: 11474104; signal peptide 1740244..1742316 Rhodopirellula baltica SH 1 1795037 NP_865476.1 CDS RB3379 NC_005027.1 1742301 1745399 R best DB hits: BLAST: ddbj:BAA91540.1; (AK001182) unnamed protein product [Homo sapiens]; E=8e-05 embl:CAB98267.1; (AJ276171) ASPIC [Homo sapiens]; E=2e-04 embl:CAB98268.1; (AJ276171) ASPIC [Homo sapiens] ----- embl:; E=2e-04 PFAM: PF00515; TPR Domain; E=1.9e-05; hypothetical protein complement(1742301..1745399) Rhodopirellula baltica SH 1 1790586 NP_865477.1 CDS RB3382 NC_005027.1 1745389 1748433 R best DB hits: BLAST: pir:E69078; conserved hypothetical protein MTH1585 -; E=0.28; hypothetical protein complement(1745389..1748433) Rhodopirellula baltica SH 1 1792525 NP_865478.1 CDS RB3387 NC_005027.1 1748459 1748695 R hypothetical protein complement(1748459..1748695) Rhodopirellula baltica SH 1 1796588 NP_865479.1 CDS RB3388 NC_005027.1 1748466 1751624 D best DB hits: BLAST: ddbj:BAA91540.1; (AK001182) unnamed protein product [Homo sapiens]; E=4e-06 embl:CAB98267.1; (AJ276171) ASPIC [Homo sapiens]; E=9e-06 embl:CAB98268.1; (AJ276171) ASPIC [Homo sapiens] ----- embl:; E=9e-06 PFAM: PF02161; Progesterone receptor; E=0.75 PF01839; FG-GAP repeat; E=7.2e-05; hypothetical protein 1748466..1751624 Rhodopirellula baltica SH 1 1794935 NP_865480.1 CDS RB3391 NC_005027.1 1751636 1751875 R hypothetical protein complement(1751636..1751875) Rhodopirellula baltica SH 1 1791267 NP_865481.1 CDS RB3393 NC_005027.1 1751865 1752047 D hypothetical protein 1751865..1752047 Rhodopirellula baltica SH 1 1791295 NP_865482.1 CDS RB3394 NC_005027.1 1752044 1752154 D hypothetical protein 1752044..1752154 Rhodopirellula baltica SH 1 1790546 NP_865483.1 CDS RB3395 NC_005027.1 1752151 1753347 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein 1752151..1753347 Rhodopirellula baltica SH 1 1795515 NP_865484.1 CDS RB3398 NC_005027.1 1753293 1753496 D hypothetical protein 1753293..1753496 Rhodopirellula baltica SH 1 1790164 NP_865485.1 CDS RB3399 NC_005027.1 1753453 1753650 R hypothetical protein complement(1753453..1753650) Rhodopirellula baltica SH 1 1792532 NP_865486.1 CDS RB3400 NC_005027.1 1753777 1755018 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 1753777..1755018 Rhodopirellula baltica SH 1 1791265 NP_865487.1 CDS RB3402 NC_005027.1 1755143 1755343 D PMID: 9634230 best DB hits: BLAST: pir:G70688; probable lppV protein - Mycobacterium tuberculosis; E=0.019; hypothetical protein 1755143..1755343 Rhodopirellula baltica SH 1 1795958 NP_865488.1 CDS RB3403 NC_005027.1 1755417 1756892 R PMID: 8020961 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=8e-37 pir:S07089; arylsulfatase (EC 3.1.6.1) - sea urchin (Lytechinus; E=3e-34 embl:CAA34667.1; (X16679) arylsulfatase [Hemicentrotus; E=3e-34 COG: aslA; COG3119 Arylsulfatase A and related enzymes; E=1e-16 PFAM: PF00884; Sulfatase; E=6.6e-42; N-acetylgalactosamine 6-sulfatase (GALNS) complement(1755417..1756892) Rhodopirellula baltica SH 1 1791692 NP_865489.1 CDS RB3404 NC_005027.1 1756954 1757106 R hypothetical protein complement(1756954..1757106) Rhodopirellula baltica SH 1 1790965 NP_865490.1 CDS RB3405 NC_005027.1 1757152 1759455 R PMID: 8843436 PMID: 1850729 best DB hits: BLAST: embl:CAB61926.1; (AL133278) hydrolase [Streptomyces; E=1e-109 embl:CAB95281.1; (AL359779) hydrolase [Streptomyces; E=4e-58 pir:A39405; beta-galactosidase (EC 3.2.1.23) - Clostridium; E=3e-19 COG: BH2723; COG3250 Beta-galactosidase/beta-glucuronidase; E=1e-18 PFAM: PF02837; Glycosyl hydrolases family 2,; E=1.3e-05 PF00703; Glycosyl hydrolases family 2,; E=7.2e-13; hydrolase complement(1757152..1759455) Rhodopirellula baltica SH 1 1795708 NP_865491.1 CDS RB3406 NC_005027.1 1759455 1759589 D hypothetical protein 1759455..1759589 Rhodopirellula baltica SH 1 1792426 NP_865492.1 CDS RB3407 NC_005027.1 1759666 1759935 R hypothetical protein complement(1759666..1759935) Rhodopirellula baltica SH 1 1792751 NP_865493.1 CDS RB3408 NC_005027.1 1759897 1760439 D PMID: 11259647 best DB hits: PFAM: PF02627; Carboxymuconolactone decarbox; E=0.33; hypothetical protein 1759897..1760439 Rhodopirellula baltica SH 1 1795063 NP_865494.1 CDS RB3410 NC_005027.1 1760441 1761265 D PMID: 10984043 best DB hits: BLAST: pir:E83259; hypothetical protein PA3089 [imported] - Pseudomonas; E=8e-10 pir:D82119; hypothetical protein VC2094 [imported] - Vibrio cholerae; E=1e-05 PFAM: PF01110; Ciliary neurotrophic factor; E=0.62; hypothetical protein 1760441..1761265 Rhodopirellula baltica SH 1 1793670 NP_865495.1 CDS RB3413 NC_005027.1 1761281 1762402 R PMID: 10567266 best DB hits: BLAST: pir:B75555; probable lipaseesterase - Deinococcus radiodurans; E=5e-28 pir:B70961; probable esterase - Mycobacterium tuberculosis (strain; E=2e-19 pir:H70731; probable esterase - Mycobacterium tuberculosis (strain; E=2e-18 COG: DR0133; COG0657 Acetyl esterase; E=5e-29 Rv2045c; COG2272 Carboxylesterase type B; E=7e-08 XF1253; COG0657 Acetyl esterase; E=3e-07 PFAM: PF00036; EF hand; E=0.0067 PF00135; Carboxylesterase; E=0.55 PF00326; Prolyl oligopeptidase; E=0.18; lipase/esterase complement(1761281..1762402) Rhodopirellula baltica SH 1 1796657 NP_865496.1 CDS RB3416 NC_005027.1 1762399 1762518 R hypothetical protein complement(1762399..1762518) Rhodopirellula baltica SH 1 1792958 NP_865497.1 CDS RB3417 NC_005027.1 1762528 1763589 R PMID: 10198006 best DB hits: BLAST: gb:AAD25394.1; (AF121904) pectate lyase [Azospirillum irakense]; E=7e-51 ddbj:BAA81752.1; (AB028877) pectate lyase E [Bacillus sp.; E=3e-49 gb:AAG29353.1; AF279264_1 (AF279264) pectate lyase [Pseudomonas; E=2e-48; pectate lyase complement(1762528..1763589) Rhodopirellula baltica SH 1 1793562 NP_865498.1 CDS RB3418 NC_005027.1 1763596 1764237 R PMID: 8843436 best DB hits: BLAST: pir:C70555; hypothetical protein Rv1154c - Mycobacterium; E=0.003; hypothetical protein complement(1763596..1764237) Rhodopirellula baltica SH 1 1793108 NP_865499.1 CDS agrA NC_005027.1 1764206 1766641 R PMID: 11722934 best DB hits: BLAST: swissprot:P13734; AGAR_ALTAT BETA-AGARASE PRECURSOR ----- pir:; E=1e-10; beta-agarase complement(1764206..1766641) Rhodopirellula baltica SH 1 1792977 NP_865500.1 CDS RB3422 NC_005027.1 1766641 1766769 D hypothetical protein 1766641..1766769 Rhodopirellula baltica SH 1 1793291 NP_865501.1 CDS aceF NC_005027.1 1766791 1768200 R PMID: 6345153 PMID: 6821375 PMID: 2121129 best DB hits: BLAST: pir:C82079; pyruvate dehydrogenase, E2 component, dihydrolipoamide; E=4e-55 pir:H75540; pyruvate dehydrogenase complex, dihydrolipoamide; E=4e-55 gb:AAK02978.1; (AE006128) AceF [Pasteurella multocida]; E=6e-54 COG: VC2413; COG0508 Dihydrolipoamide acyltransferases; E=3e-56 PFAM: PF00364; Biotin-requiring enzyme; E=2.1e-20 PF02817; e3 binding domain; E=8.5e-14 PF00198; 2-oxo acid dehydrogenases acylt; E=8.5e-100; pyruvate dehydrogenase, E2 component, dihydrolipoamide acetyltransferase complement(1766791..1768200) Rhodopirellula baltica SH 1 1793745 NP_865502.1 CDS aceE NC_005027.1 1768339 1771071 R E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 complement(1768339..1771071) Rhodopirellula baltica SH 1 1795563 NP_865503.1 CDS RB3426 NC_005027.1 1771404 1771622 D hypothetical protein 1771404..1771622 Rhodopirellula baltica SH 1 1792006 NP_865504.1 CDS dcd NC_005027.1 1771559 1772155 R Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase complement(1771559..1772155) Rhodopirellula baltica SH 1 1793506 NP_865505.1 CDS RB3429 NC_005027.1 1772192 1772629 R hypothetical protein complement(1772192..1772629) Rhodopirellula baltica SH 1 1793622 NP_865506.1 CDS RB3430 NC_005027.1 1772646 1773392 D PMID: 11677609 best DB hits: BLAST: gb:AAC61875.1; (M59935) unknown [Aspergillus nidulans]; E=0.062 pir:T41414; probable receptor-associated protein - fission yeast; E=0.23; hypothetical protein 1772646..1773392 Rhodopirellula baltica SH 1 1794050 NP_865507.1 CDS lon NC_005027.1 1773397 1774179 D PMID: 7961402 PMID: 8969504 PMID: 9384377 best DB hits: BLAST: pir:S76379; hypothetical protein - Synechocystis sp. (strain PCC; E=2e-05 swissprot:P37945; LON1_BACSU ATP-DEPENDENT PROTEASE LA 1 -----; E=8e-05 swissprot:O66605; LON_AQUAE ATP-DEPENDENT PROTEASE LA -----; E=1e-04 COG: sll0195; COG2802 Uncharacterized protein, similar to the N-terminal; E=2e-06 BS_lonA; COG0466 ATP-dependent Lon protease, bacterial type; E=8e-06 PFAM: PF02190; ATP-dependent protease La (LON); E=8.3e-08; ATP-dependent protease La 1 1773397..1774179 Rhodopirellula baltica SH 1 1797023 NP_865508.1 CDS RB3433 NC_005027.1 1774499 1774966 D PMID: 9278503 best DB hits: BLAST: swissprot:P75707; YBAZ_ECOLI HYPOTHETICAL 14.4 KD PROTEIN IN; E=1e-04 gb:AAG54804.1; AE005224_9 (AE005224) orf, hypothetical protein; E=2e-04 embl:CAC16996.1; (AL450350) conserved hypothetical protein; E=3e-04 COG: ybaZ; COG0350 Methylated DNA-protein cysteine methyltransferase; E=1e-05 PFAM: PF01035; 6-O-methylguanine DNA methyltr; E=8.4e-05; methylated-DNA-protein-cysteine methyltransferase 1774499..1774966 Rhodopirellula baltica SH 1 1793691 NP_865509.1 CDS RB3435 NC_005027.1 1775030 1776091 R PMID: 10086841 best DB hits: BLAST: ddbj:BAB05303.1; (AP001512) BH1584~unknown conserved protein in; E=1e-18 pir:T34720; probable lipoprotein - Streptomyces coelicolor -----; E=2e-05 pir:T27110; hypothetical protein Y52B11B.2 - Caenorhabditis elegans; E=6e-04; hypothetical protein complement(1775030..1776091) Rhodopirellula baltica SH 1 1793063 NP_865510.1 CDS RB3436 NC_005027.1 1776194 1776367 D hypothetical protein 1776194..1776367 Rhodopirellula baltica SH 1 1796947 NP_865511.1 CDS RB3437 NC_005027.1 1776314 1777639 R best DB hits: PFAM: PF01034; Syndecan domain; E=0.87; signal peptide complement(1776314..1777639) Rhodopirellula baltica SH 1 1793797 NP_865512.1 CDS RB3440 NC_005027.1 1777782 1779092 D hypothetical protein 1777782..1779092 Rhodopirellula baltica SH 1 1795527 NP_865513.1 CDS RB3441 NC_005027.1 1779073 1779219 D hypothetical protein 1779073..1779219 Rhodopirellula baltica SH 1 1791704 NP_865514.1 CDS RB3442 NC_005027.1 1779212 1780636 R PMID: 10086841 best DB hits: BLAST: ddbj:BAB05939.1; (AP001514) dehydrogenase [Bacillus halodurans]; E=1e-08 pir:B72359; lipopolysaccharide biosynthesis protein BplA -; E=2e-07 pir:D71201; hypothetical protein PH1881 - Pyrococcus horikoshii; E=5e-07 COG: BH2220; COG0673 Predicted dehydrogenases and related proteins; E=1e-09 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=1.2e-14; dehydrogenase complement(1779212..1780636) Rhodopirellula baltica SH 1 1793566 NP_865515.1 CDS RB3446 NC_005027.1 1780781 1782316 R PMID: 11859360 best DB hits: BLAST: swissprot:P87051; YDJ3_SCHPO PROBABLE PEPTIDYL-PROLYL CIS-TRANS; E=5e-16 pir:H82708; peptidyl-prolyl cis-trans isomerase XF1212 [imported] -; E=9e-16 pir:H69044; peptidylprolyl isomerase (EC 5.2.1.8) MTH1338; E=2e-14 COG: XF1212; COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) -; E=9e-17 PFAM: PF00160; Cyclophilin type peptidyl-proly; E=1.9e-05; peptidyl-prolyl cis-trans isomerase cyp2 complement(1780781..1782316) Rhodopirellula baltica SH 1 1796996 NP_865516.1 CDS RB3449 NC_005027.1 1782317 1782475 R hypothetical protein complement(1782317..1782475) Rhodopirellula baltica SH 1 1790460 NP_865517.1 CDS RB3450 NC_005027.1 1782358 1782543 R hypothetical protein complement(1782358..1782543) Rhodopirellula baltica SH 1 1795757 NP_865518.1 CDS ispF NC_005027.1 1782522 1783022 D PMID: 10694574 best DB hits: BLAST: swissprot:P44815; ISPF_HAEIN 2C-METHYL-D-ERYTHRITOL; E=6e-36 gb:AAF65155.1; AF250236_1 (AF250236) 2C-methyl-D-erythritol; E=3e-34 gb:AAG52445.1; AC010852_2 (AC010852) unknown protein; 376-1789; E=5e-34 COG: HI0671; COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; E=6e-37 BS_yacN; COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate; E=4e-31 VC0529; COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; E=1e-30 PFAM: PF02542; YgbB family; E=9.6e-63; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1782522..1783022 Rhodopirellula baltica SH 1 1789910 NP_865519.1 CDS fliD NC_005027.1 1783051 1785432 R PMID: 8501040 best DB hits: BLAST: swissprot:Q03475; LAFB_VIBPA FLAGELLAR HOOK-ASSOCIATED PROTEIN 2; E=4e-12 pir:H72292; hypothetical protein TM1123 - Thermotoga maritima; E=6e-11 gb:AAF19182.1; AF198617_6 (AF198617) FlaH [Aeromonas caviae]; E=2e-09 COG: TM1123; COG1345 Flagellar capping protein; E=6e-12 PFAM: PF02465; Flagellar hook-associated protein 2; E=0.031; lateral flagellar hook-associated protein 2 complement(1783051..1785432) Rhodopirellula baltica SH 1 1795294 NP_865520.1 CDS RB3455 NC_005027.1 1785458 1785631 D hypothetical protein 1785458..1785631 Rhodopirellula baltica SH 1 1797087 NP_865521.1 CDS RB3456 NC_005027.1 1785628 1785972 R hypothetical protein complement(1785628..1785972) Rhodopirellula baltica SH 1 1792196 NP_865522.1 CDS RB3459 NC_005027.1 1786015 1786476 R signal peptide complement(1786015..1786476) Rhodopirellula baltica SH 1 1793782 NP_865523.1 CDS RB3462 NC_005027.1 1786494 1787042 R signal peptide complement(1786494..1787042) Rhodopirellula baltica SH 1 1791249 NP_865524.1 CDS RB3464 NC_005027.1 1786989 1787240 D hypothetical protein 1786989..1787240 Rhodopirellula baltica SH 1 1790268 NP_865525.1 CDS gyrA NC_005027.1 1787376 1789853 D PMID: 7642123 best DB hits: BLAST: swissprot:P41513; GYRA_ERWCA DNA GYRASE SUBUNIT A ----- pir:; E=1e-105 gb:AAB95117.1; (U56906) DNA gyrase [Serratia marcescens]; E=1e-105 swissprot:P48372; GYRA_PSEAE DNA GYRASE SUBUNIT A ----- pir:; E=1e-104 COG: PA3168; COG0188 DNA gyrase (topoisomerase II) A subunit; E=1e-105 PFAM: PF00521; DNA gyrase/topoisomerase IV, su; E=2.9e-225; DNA gyrase subunit A 1787376..1789853 Rhodopirellula baltica SH 1 1795138 NP_865526.1 CDS gyrB NC_005027.1 1789942 1791855 D PMID: 8863738 best DB hits: BLAST: pir:JC4960; DNA topoisomerase (ATP-hydrolyzing) (EC 5.99.1.3) B -; E=1e-140 swissprot:P77993; GYRB_THEMA DNA GYRASE SUBUNIT B (TOPOISOMERASE; E=1e-140 gb:AAG21374.1; AF288224_1 (AF288224) DNA Gyrase B subunit; E=1e-136 COG: TM0833; COG0187 DNA gyrase (topoisomerase II) B subunit; E=1e-141 PFAM: PF02518; Histidine kinase-, DNA gyrase B; E=2.1e-26 PF00204; DNA topoisomerase II (N-termina; E=1.3e-54 PF01751; Toprim domain; E=2.9e-10; DNA gyrase subunit B 1789942..1791855 Rhodopirellula baltica SH 1 1790114 NP_865527.1 CDS RB3467 NC_005027.1 1791998 1792615 R hypothetical protein complement(1791998..1792615) Rhodopirellula baltica SH 1 1795099 NP_865528.1 CDS RB3468 NC_005027.1 1792382 1793407 D best DB hits: BLAST: gb:AAC09305.1; (AF047044) transposase [Nostoc sp. PCC; E=2e-41 pir:A32816; hypothetical protein, 33K - Pseudomonas atlantica; E=7e-35 pir:B81886; probable transposase NMA1185 [imported] - Neisseria; E=1e-30 PFAM: PF01548; Transposase; E=2.2e-05 PF02371; Transposase IS116/IS110/IS902; E=1.3e-25; transposase 1792382..1793407 Rhodopirellula baltica SH 1 1791172 NP_865529.1 CDS RB3471 NC_005027.1 1793823 1794386 R PMID: 3026317 PMID: 3001025 PMID: 9278503 best DB hits: BLAST: swissprot:P08329; AROL_ECOLI SHIKIMATE KINASE II (SKII) -----; E=2e-22 swissprot:P34003; AROK_PSEAE SHIKIMATE KINASE (SK) ----- pir:; E=4e-20 swissprot:P72796; AROK_SYNY3 SHIKIMATE KINASE (SK) ----- pir:; E=4e-20 COG: aroL; COG0703 Shikimate kinase; E=2e-23 PFAM: PF01583; Adenylylsulfate kinase; E=0.014 PF00005; ABC transporter; E=0.059 PF00910; RNA helicase; E=0.016; shikimate kinase II complement(1793823..1794386) Rhodopirellula baltica SH 1 1794136 NP_865530.1 CDS RB3473 NC_005027.1 1794413 1795744 D hypothetical protein 1794413..1795744 Rhodopirellula baltica SH 1 1794877 NP_865531.1 CDS RB3476 NC_005027.1 1795880 1796875 D PMID: 8688087 best DB hits: BLAST: swissprot:Q58408; YA02_METJA HYPOTHETICAL PROTEIN MJ1002 -----; E=4e-23 pir:F75071; hypothetical protein PAB1730 - Pyrococcus abyssi (strain; E=3e-22 pir:B71094; hypothetical protein PH1015 - Pyrococcus horikoshii; E=2e-21 COG: MJ1002; COG1624 Uncharacterized ACR; E=4e-24 PFAM: PF02457; Domain of unknown function DUF147; E=1.2e-26; hypothetical protein 1795880..1796875 Rhodopirellula baltica SH 1 1794441 NP_865532.1 CDS map NC_005027.1 1797074 1797871 R PMID: 3027045 PMID: 8471602 PMID: 10387007 PMID: 10555963 PMID: 8202364 best DB hits: BLAST: swissprot:P53579; AMP1_SYNY3 METHIONINE AMINOPEPTIDASE A; E=3e-57 swissprot:P07906; AMPM_ECOLI METHIONINE AMINOPEPTIDASE (MAP); E=1e-55 swissprot:P10882; AMPM_SALTY METHIONINE AMINOPEPTIDASE (MAP); E=2e-55 COG: slr0918; COG0024 Methionine aminopeptidase; E=3e-58 PFAM: PF00557; metallopeptidase M24; E=9.9e-60; methionine aminopeptidase complement(1797074..1797871) Rhodopirellula baltica SH 1 1795190 NP_865533.1 CDS RB3479 NC_005027.1 1797880 1801143 D PMID: 11254562 best DB hits: PFAM: PF00263; Bacterial type II and III secretion; E=0.021; general secretory pathway protein 1797880..1801143 Rhodopirellula baltica SH 1 1791838 NP_865534.1 CDS RB3482 NC_005027.1 1801140 1802831 D PMID: 1944223 best DB hits: BLAST: pir:D82672; general secretory pathway protein E XF1517 [imported] -; E=1e-114 swissprot:P31742; GSPE_XANCP GENERAL SECRETION PATHWAY PROTEIN E; E=1e-110 pir:T12056; xpsE protein - Xanthomonas campestris pv. campestris; E=1e-110 COG: XF1517; COG2804 Predicted ATPases involved in pili biogenesis, PilB; E=1e-115 PFAM: PF00004; ATPase associated with variou; E=0.13 PF00448; SRP54-type protein, GTPase domain; E=0.038 PF00437; Bacterial type II secretion system p; E=8.8e-156; general secretion pathway protein E 1801140..1802831 Rhodopirellula baltica SH 1 1795273 NP_865535.1 CDS RB3484 NC_005027.1 1802913 1804127 D PMID: 1971619 PMID: 10984043 best DB hits: BLAST: pir:A75344; pilin biogenesis protein - Deinococcus radiodurans; E=4e-52 swissprot:P22609; PILC_PSEAE FIMBRIAL ASSEMBLY PROTEIN PILC; E=3e-48 pir:F82546; fimbrial assembly protein XF2538 [imported] - Xylella; E=3e-47 COG: DR1863; COG1459 General secretory pathway protein F; E=4e-53 PFAM: PF01961; Integral membrane protein DUF110; E=0.0065 PF00482; Bacterial type II secretion system p; E=5.1e-83; type 4 fimbrial assembly protein pilC 1802913..1804127 Rhodopirellula baltica SH 1 1794663 NP_865536.1 CDS RB3485 NC_005027.1 1804092 1804241 R hypothetical protein complement(1804092..1804241) Rhodopirellula baltica SH 1 1792570 NP_865537.1 CDS melR NC_005027.1 1804252 1805121 R PMID: 2830169 PMID: 2684786 PMID: 1445207 PMID: 9108148 best DB hits: BLAST: gb:AAC24510.1; (AF049243) regulatory protein [Mesorhizobium loti]; E=2e-25 swissprot:P10411; MELR_ECOLI MELIBIOSE OPERON REGULATORY PROTEIN; E=5e-23 ddbj:BAB20427.1; (AB053204) melibiose operon regulatory protein; E=7e-23 COG: melR; COG2207 AraC-type DNA-binding domain-containing proteins; E=5e-24 BS_adaA; COG2169 Adenosine deaminase; E=1e-07 VC1260; COG2207 AraC-type DNA-binding domain-containing proteins; E=1e-07 PFAM: PF00165; Bacterial regulatory helix-turn-heli; E=4.3e-24; melibiose operon regulatory protein complement(1804252..1805121) Rhodopirellula baltica SH 1 1793216 NP_865538.1 CDS RB3488 NC_005027.1 1805258 1806502 D PMID: 1460002 PMID: 9384377 best DB hits: BLAST: swissprot:Q06004; DHSO_BACSU SORBITOL DEHYDROGENASE (L-IDITOL; E=1e-32 pir:G72376; alcohol dehydrogenase, zinc-containing - Thermotoga; E=2e-27 pir:H71110; probable dehydrogenase - Pyrococcus horikoshii -----; E=9e-25 COG: BS_gutB; COG1063 Threonine dehydrogenase and related Zn-dependent; E=1e-33 PFAM: PF00107; Zinc-binding dehydrogenases; E=2.2e-50; sorbitol dehydrogenase 1805258..1806502 Rhodopirellula baltica SH 1 1791789 NP_865539.1 CDS RB3490 NC_005027.1 1806450 1806644 R hypothetical protein complement(1806450..1806644) Rhodopirellula baltica SH 1 1791298 NP_865540.1 CDS rbsD NC_005027.1 1806665 1807072 D cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source; D-ribose pyranase 1806665..1807072 Rhodopirellula baltica SH 1 1790046 NP_865541.1 CDS rbsB NC_005027.1 1807097 1808104 D PMID: 6313683 PMID: 3011793 PMID: 1583688 PMID: 7982928 best DB hits: BLAST: pir:C72311; ribose ABC transporter, periplasmic ribose-binding; E=7e-89 pir:C82497; ribose ABC transporter, periplasmic D-ribose-binding; E=1e-48 pir:JGEBRT; D-ribose-binding protein - Salmonella typhimurium; E=1e-47 COG: TM0958; COG1879 Periplasmic sugar-binding proteins; E=6e-90 BH3727; COG1609 Transcriptional regulators; E=5e-11 yphF; COG1879 Periplasmic sugar-binding proteins; E=1e-10 PFAM: PF00532; Periplasmic binding proteins; E=0.0014 PF00534; Glycosyl transferases group 1; E=0.11 PF00532; Periplasmic binding proteins; E=0.21; ribose ABC transporter, periplasmic ribose-binding protein rbsB 1807097..1808104 Rhodopirellula baltica SH 1 1796937 NP_865542.1 CDS RB3495 NC_005027.1 1808101 1808757 D PMID: 10360571 best DB hits: BLAST: pir:F72314; hypothetical protein TM0957 - Thermotoga maritima; E=2e-09 gb:AAD37311.1; AF135170_2 (AF135170) unknown [Yersinia pestis]; E=0.22; hypothetical protein 1808101..1808757 Rhodopirellula baltica SH 1 1795898 NP_865543.1 CDS rbsA NC_005027.1 1808754 1810289 D PMID: 3011793 PMID: 3086314 PMID: 7686882 best DB hits: BLAST: pir:E72314; ribose ABC transporter ATP-binding protein - Thermotoga; E=1e-132 pir:A82497; ribose ABC transporter ATP-binding protein VCA0128; E=1e-110 swissprot:P04983; RBSA_ECOLI RIBOSE TRANSPORT ATP-BINDING PROTEIN; E=1e-109 COG: TM0956; COG1129 ABC-type sugar (aldose) transport system, ATPase; E=1e-133 PFAM: PF00005; ABC transporter; E=3.5e-55; ribose ABC transporter ATP-binding protein rbsA 1808754..1810289 Rhodopirellula baltica SH 1 1797111 NP_865544.1 CDS rbsC NC_005027.1 1810283 1811254 D PMID: 7921236 PMID: 9384377 best DB hits: BLAST: pir:D72314; ribose ABC transporter, permease - Thermotoga; E=3e-57 pir:B69690; ribose ABC transporter (permease) rbsC - Bacillus; E=6e-41 pir:B82497; ribose ABC transporter, permease VCA0129; E=2e-40 COG: TM0955; COG1172 Ribose/xylose/arabinose/galactoside ABC-type; E=3e-58 rbsC; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport; E=6e-35 TM0112; COG1172 Ribose/xylose/arabinose/galactoside ABC-type; E=9e-30 PFAM: PF02653; Branched-chain amino acid transp; E=3.8e-10; ribose transport system permease rbsC 1810283..1811254 Rhodopirellula baltica SH 1 1793326 NP_865545.1 CDS rbsK NC_005027.1 1811256 1812200 D PMID: 3011794 best DB hits: BLAST: embl:CAC12877.1; (AJ404857) ribokinase [Homo sapiens]; E=1e-51 pir:B83403; ribokinase PA1950 [imported] - Pseudomonas aeruginosa; E=2e-50 swissprot:P44331; RBSK_HAEIN RIBOKINASE ----- pir: B64073; E=2e-48 COG: PA1950; COG0524 Sugar kinases, ribokinase; E=2e-51 PFAM: PF00294; pfkB family carbohydrate kinase; E=3.3e-74; ribokinase 1811256..1812200 Rhodopirellula baltica SH 1 1794245 NP_865546.1 CDS RB3500 NC_005027.1 1812197 1813639 D PMID: 11259647 best DB hits: PFAM: PF01819; Levivirus coat protein; E=0.45 PF00801; PKD domain; E=0.16; signal peptide 1812197..1813639 Rhodopirellula baltica SH 1 1792012 NP_865547.1 CDS RB3501 NC_005027.1 1813718 1815190 D PMID: 11259647; signal peptide 1813718..1815190 Rhodopirellula baltica SH 1 1791830 NP_865548.1 CDS RB3504 NC_005027.1 1815121 1816584 D PMID: 11259647; hypothetical protein 1815121..1816584 Rhodopirellula baltica SH 1 1794310 NP_865549.1 CDS RB3505 NC_005027.1 1816597 1816704 D hypothetical protein 1816597..1816704 Rhodopirellula baltica SH 1 1796885 NP_865550.1 CDS RB3506 NC_005027.1 1816685 1816825 R hypothetical protein complement(1816685..1816825) Rhodopirellula baltica SH 1 1796750 NP_865551.1 CDS RB3507 NC_005027.1 1816898 1817077 R hypothetical protein complement(1816898..1817077) Rhodopirellula baltica SH 1 1791136 NP_865552.1 CDS galE2 NC_005027.1 1817046 1817927 D best DB hits: BLAST: swissprot:P33119; GALE_CORDI UDP-GLUCOSE 4-EPIMERASE; E=2e-07 pir:A70392; UDP-glucose-4-epimerase - Aquifex aeolicus ----- gb:; E=2e-07 pir:C69149; conserved hypothetical protein MTH380 - Methanobacterium; E=2e-07 COG: VCA0774; COG1087 UDP-glucose 4-epimerase; E=7e-06 Cj1319; COG0451 Nucleoside-diphosphate-sugar epimerases; E=4e-06 MTH631; COG1087 UDP-glucose 4-epimerase; E=1e-06 PFAM: PF01370; NAD dependent epimerase/dehydratase; E=0.56 PF01073; 3-beta hydroxysteroid dehydrogenase; E=0.63 PF01370; NAD dependent epimerase/dehydratase; E=2.9e-05; UDP-glucose 4-epimerase GalE2 1817046..1817927 Rhodopirellula baltica SH 1 1790955 NP_865553.1 CDS RB3509 NC_005027.1 1818015 1819025 D best DB hits: BLAST: pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=1e-06 embl:CAB94634.1; (AL359215) secreted glycosyl hydrolase.; E=7e-04 pir:T35029; hypothetical protein SC4C6.21c - Streptomyces coelicolor; E=0.13; hypothetical protein 1818015..1819025 Rhodopirellula baltica SH 1 1796035 NP_865554.1 CDS RB3513 NC_005027.1 1819062 1820495 D PMID: 11259647 best DB hits: BLAST: pir:G72720; probable oligopeptide-binding protein oppA APE0304 -; E=0.73 PFAM: PF00028; Cadherin domain; E=0.14; signal peptide 1819062..1820495 Rhodopirellula baltica SH 1 1794951 NP_865555.1 CDS RB3514 NC_005027.1 1820492 1821781 D PMID: 11259647; signal peptide 1820492..1821781 Rhodopirellula baltica SH 1 1795168 NP_865556.1 CDS RB3517 NC_005027.1 1821890 1823275 D hypothetical protein 1821890..1823275 Rhodopirellula baltica SH 1 1790860 NP_865557.1 CDS arsR NC_005027.1 1823417 1823743 D PMID: 8843436 best DB hits: BLAST: embl:CAB71255.1; (AL138598) ArsR-family transcriptional; E=2e-06 pir:S74901; arsenical resistance operon repressor - Synechocystis; E=9e-05 pir:D64465; hypothetical protein MJ1325 - Methanococcus jannaschii; E=1e-04 COG: sll1957; COG0640 Predicted transcriptional regulators; E=9e-06 PFAM: PF01022; Bacterial regulatory protein, arsR f; E=9.4e-13; transcriptional regulator ArsR 1823417..1823743 Rhodopirellula baltica SH 1 1790813 NP_865558.1 CDS RB3522 NC_005027.1 1823744 1825345 D signal peptide 1823744..1825345 Rhodopirellula baltica SH 1 1791529 NP_865559.1 CDS RB3524 NC_005027.1 1825364 1827214 R PMID: 7751272 best DB hits: BLAST: pir:C83558; hypothetical protein PA0692 [imported] - Pseudomonas; E=1e-15 swissprot:P45356; HXB2_HAEIN HEMEHEMOPEXIN UTILIZATION PROTEIN B; E=2e-05 swissprot:P44601; HXB1_HAEIN HEMEHEMOPEXIN UTILIZATION PROTEIN B; E=3e-05 COG: PA0692; COG2831 Hemolysin activation/secretion protein; E=1e-16; heme/hemopexin utilization protein huxB complement(1825364..1827214) Rhodopirellula baltica SH 1 1794765 NP_865560.1 CDS RB3525 NC_005027.1 1827251 1827376 R hypothetical protein complement(1827251..1827376) Rhodopirellula baltica SH 1 1790537 NP_865561.1 CDS RB3526 NC_005027.1 1827366 1827521 D hypothetical protein 1827366..1827521 Rhodopirellula baltica SH 1 1796902 NP_865562.1 CDS RB3527 NC_005027.1 1827580 1840344 D PMID: 7815944 best DB hits: BLAST: pir:F83068; hypothetical protein PA4625 [imported] - Pseudomonas; E=5e-25 gb:AAA20524.1; (U08875) adhesin [Haemophilus influenzae]; E=1e-19 pir:B43855; high-molecular-weight surface-exposed protein -; E=2e-19; heme/hemopexin utilization protein huxA 1827580..1840344 Rhodopirellula baltica SH 1 1796200 NP_865563.1 CDS RB3532 NC_005027.1 1840557 1841543 D PMID: 11743194 best DB hits: BLAST: pir:S74570; alkaline phosphatase (EC 3.1.3.1) phoA - Synechocystis; E=0.002 pir:T05561; hypothetical protein F22K18.70 - Arabidopsis thaliana; E=0.24 embl:CAB08432.1; (Z95151) Icc [Mycobacterium leprae]; E=0.54 COG: sll0222; COG1409 Predicted phosphohydrolases; E=2e-04 PFAM: PF01425; Amidase; E=0.24; alkaline phosphatase 1840557..1841543 Rhodopirellula baltica SH 1 1792779 NP_865564.1 CDS RB3534 NC_005027.1 1841586 1844699 R best DB hits: BLAST: ddbj:BAA91540.1; (AK001182) unnamed protein product [Homo sapiens]; E=1e-05 embl:CAB98267.1; (AJ276171) ASPIC [Homo sapiens]; E=4e-05 embl:CAB98268.1; (AJ276171) ASPIC [Homo sapiens] ----- embl:; E=4e-05; hypothetical protein complement(1841586..1844699) Rhodopirellula baltica SH 1 1796827 NP_865565.1 CDS RB3539 NC_005027.1 1844714 1844914 R hypothetical protein complement(1844714..1844914) Rhodopirellula baltica SH 1 1793833 NP_865566.1 CDS RB3542 NC_005027.1 1844996 1846228 R best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide complement(1844996..1846228) Rhodopirellula baltica SH 1 1794305 NP_865567.1 CDS RB3545 NC_005027.1 1846255 1846428 D hypothetical protein 1846255..1846428 Rhodopirellula baltica SH 1 1794782 NP_865568.1 CDS RB3546 NC_005027.1 1846454 1846567 R hypothetical protein complement(1846454..1846567) Rhodopirellula baltica SH 1 1790684 NP_865569.1 CDS RB3547 NC_005027.1 1846534 1846734 R hypothetical protein complement(1846534..1846734) Rhodopirellula baltica SH 1 1793513 NP_865570.1 CDS RB3548 NC_005027.1 1846834 1847013 R hypothetical protein complement(1846834..1847013) Rhodopirellula baltica SH 1 1793914 NP_865571.1 CDS RB3549 NC_005027.1 1847124 1848020 D PMID: 9573174 best DB hits: BLAST: ddbj:BAB05677.1; (AP001513) BH1958~unknown conserved protein; E=1e-07 swissprot:O33813; LACR_STAXY LACTOSE OPERON TRANSCRIPTION; E=4e-07 ddbj:BAB07561.1; (AP001520) two-component response regulator; E=6e-07 COG: BH1958; COG2207 AraC-type DNA-binding domain-containing proteins; E=1e-08 BH0394; COG2169 Adenosine deaminase; E=2e-06 PA2337; COG2207 AraC-type DNA-binding domain-containing proteins; E=3e-06 PFAM: PF00165; Bacterial regulatory helix-turn-heli; E=3.7e-20; lactose operon transcription activator 1847124..1848020 Rhodopirellula baltica SH 1 1791855 NP_865572.1 CDS RB3550 NC_005027.1 1848038 1848991 R PMID: 1909424 best DB hits: BLAST: swissprot:P26223; XYNB_BUTFI ENDO-1,4-BETA-XYLANASE B (XYLANASE B); E=2e-10 prf:1718306A; xylanase [Butyrivibrio fibrisolvens]; E=2e-10 gb:AAK04528.1; AE006280_4 (AE006280) sugar hydrolase [Lactococcus; E=4e-07 COG: DR0133; COG0657 Acetyl esterase; E=0.007 PFAM: PF01738; Dienelactone hydrolase; E=0.027; endo-1,4-beta-xylanase B complement(1848038..1848991) Rhodopirellula baltica SH 1 1795363 NP_865573.1 CDS RB3552 NC_005027.1 1849023 1849418 R hypothetical protein complement(1849023..1849418) Rhodopirellula baltica SH 1 1796621 NP_865574.1 CDS glcK NC_005027.1 1849463 1850161 D PMID: 9620975 best DB hits: BLAST: pir:T44787; glucokinase (EC 2.7.1.2) [imported] - Bacillus; E=5e-14 swissprot:Q44406; XYLR_ANATH XYLOSE REPRESSOR ----- embl:; E=5e-13 gb:AAK06121.1; AE006432_3 (AE006432) glucose kinase (EC 2.7.1.2); E=6e-12 COG: BS_glcK; COG1940 Transcriptional regulators; E=6e-13 PFAM: PF00480; ROK family; E=3.2e-21; glucokinase 1849463..1850161 Rhodopirellula baltica SH 1 1797081 NP_865575.1 CDS gpi2 NC_005027.1 1850205 1852118 D PMID: 3284790 best DB hits: BLAST: swissprot:O97440; GNP2_GIALA GLUCOSAMINE-6-PHOSPHATE ISOMERASE 2; E=1e-44 swissprot:O31458; YBFT_BACSU HYPOTHETICAL 27.3 KD PROTEIN IN; E=5e-44 swissprot:O35000; NAGB_BACSU GLUCOSAMINE-6-PHOSPHATE ISOMERASE; E=4e-43 COG: BS_ybfT; COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate; E=4e-45 DRA0063; COG2120 Uncharacterized proteins, LmbE homologs; E=0.002 PFAM: PF01182; Glucosamine-6-phosphate isome; E=2e-70 PF02585; Uncharacterized LmbE-like pro; E=3.6e-07; glucosamine-6-phosphate deaminase-like protein 1850205..1852118 Rhodopirellula baltica SH 1 1796868 NP_865576.1 CDS RB3557 NC_005027.1 1852183 1852356 D hypothetical protein 1852183..1852356 Rhodopirellula baltica SH 1 1793597 NP_865577.1 CDS RB3559 NC_005027.1 1852389 1852646 D hypothetical protein 1852389..1852646 Rhodopirellula baltica SH 1 1790924 NP_865578.1 CDS RB3562 NC_005027.1 1852643 1853119 D hypothetical protein 1852643..1853119 Rhodopirellula baltica SH 1 1796960 NP_865579.1 CDS RB3564 NC_005027.1 1853116 1853673 D signal peptide 1853116..1853673 Rhodopirellula baltica SH 1 1790161 NP_865580.1 CDS RB3565 NC_005027.1 1853670 1854083 D signal peptide 1853670..1854083 Rhodopirellula baltica SH 1 1796791 NP_865581.1 CDS RB3566 NC_005027.1 1854080 1854274 D hypothetical protein 1854080..1854274 Rhodopirellula baltica SH 1 1795357 NP_865582.1 CDS RB3567 NC_005027.1 1854181 1854339 D hypothetical protein 1854181..1854339 Rhodopirellula baltica SH 1 1796242 NP_865583.1 CDS RB3568 NC_005027.1 1854195 1854353 R hypothetical protein complement(1854195..1854353) Rhodopirellula baltica SH 1 1793844 NP_865584.1 CDS RB3569 NC_005027.1 1854357 1854728 R PMID: 11759840; hypothetical protein complement(1854357..1854728) Rhodopirellula baltica SH 1 1797012 NP_865585.1 CDS RB3570 NC_005027.1 1854745 1855002 R hypothetical protein complement(1854745..1855002) Rhodopirellula baltica SH 1 1795731 NP_865586.1 CDS RB3571 NC_005027.1 1855012 1858557 R PMID: 8921895 best DB hits: BLAST: swissprot:P44677; TOLB_HAEIN TOLB PROTEIN PRECURSOR ----- pir:; E=4e-04 pir:JC5213; tolB protein - Haemophilus influenzae ----- gb:; E=0.001 pir:F82625; TolB protein precursor XF1897 [imported] - Xylella; E=0.001 COG: HI0382; COG0823 Periplasmic component of the Tol biopolymer transport; E=4e-05; TolB protein [precursor] complement(1855012..1858557) Rhodopirellula baltica SH 1 1793316 NP_865587.1 CDS RB3574 NC_005027.1 1858576 1858914 R hypothetical protein complement(1858576..1858914) Rhodopirellula baltica SH 1 1791129 NP_865588.1 CDS RB3575 NC_005027.1 1858779 1859237 D hypothetical protein 1858779..1859237 Rhodopirellula baltica SH 1 1795355 NP_865589.1 CDS RB3577 NC_005027.1 1859377 1859925 D signal peptide 1859377..1859925 Rhodopirellula baltica SH 1 1796265 NP_865590.1 CDS RB3579 NC_005027.1 1859873 1860910 D best DB hits: BLAST: pir:S75452; hypothetical protein slr1506 - Synechocystis sp. (strain; E=2e-09 pir:S76481; hypothetical protein - Synechocystis sp. (strain PCC; E=5e-09 ddbj:BAB04446.1; (AP001509) BH0727~unknown conserved protein in; E=5e-08; hypothetical protein 1859873..1860910 Rhodopirellula baltica SH 1 1794685 NP_865591.1 CDS RB3582 NC_005027.1 1861026 1861430 D signal peptide 1861026..1861430 Rhodopirellula baltica SH 1 1796022 NP_865592.1 CDS RB3583 NC_005027.1 1861424 1861582 R hypothetical protein complement(1861424..1861582) Rhodopirellula baltica SH 1 1790202 NP_865593.1 CDS RB3584 NC_005027.1 1861605 1863539 D PMID: 10952301 best DB hits: BLAST: pir:F82291; conserved hypothetical protein VC0689 [imported] -; E=4e-81 pir:G83177; probable sodiumhydrogen antiporter PA3739 [imported] -; E=3e-80 pir:S75742; hypothetical protein sll0556 - Synechocystis sp. (strain; E=1e-36 COG: VC0689_1; COG0025 NhaP-type Na+/H+ and K+/H+ antiporters; E=2e-58 PFAM: PF00999; Sodium/hydrogen exchanger fami; E=8.8e-35 PF00698; Acyl transferase domain; E=0.27 PF02254; KTN NAD-binding domain; E=0.0024; sodium/hydrogen antiporter 1861605..1863539 Rhodopirellula baltica SH 1 1790908 NP_865594.1 CDS RB3585 NC_005027.1 1863536 1864195 D hypothetical protein 1863536..1864195 Rhodopirellula baltica SH 1 1790489 NP_865595.1 CDS RB3587 NC_005027.1 1864455 1864796 R hypothetical protein complement(1864455..1864796) Rhodopirellula baltica SH 1 1796589 NP_865596.1 CDS RB3589 NC_005027.1 1864876 1866579 D best DB hits: BLAST: pir:G82262; probable exopolysaccharide biosynthesis protein VC0937; E=3e-06 pir:S67819; GumC protein - Xanthomonas campestris ----- gb:; E=3e-04 pir:D83367; hypothetical protein PA2235 [imported] - Pseudomonas; E=0.002 COG: PA2235; COG3206 Uncharacterized protein involved in; E=2e-04 PFAM: PF02706; Chain length determinant protein; E=0.23; exopolysaccharide biosynthesis protein 1864876..1866579 Rhodopirellula baltica SH 1 1796366 NP_865597.1 CDS RB3591 NC_005027.1 1866735 1868054 D PMID: 8843436 best DB hits: BLAST: embl:CAB58332.1; (AL121855) transferase [Streptomyces; E=9e-44 pir:D72511; probable hexosyltransferase (EC 2.4.1.-) APE2066; E=4e-12 pir:D69143; LPS biosynthesis RfbU related protein - Methanobacterium; E=4e-12 COG: APE2066; COG0438 Predicted glycosyltransferases; E=4e-13 PFAM: PF00534; Glycosyl transferases group 1; E=8e-32; transferase 1866735..1868054 Rhodopirellula baltica SH 1 1790647 NP_865598.1 CDS RB3593 NC_005027.1 1867948 1868775 D PMID: 9384377 best DB hits: BLAST: pir:G69849; endo-1,4-beta-xylanase homolog yjeA - Bacillus subtilis; E=6e-04 pir:A70081; conserved hypothetical protein yxkH - Bacillus subtilis; E=0.001 pir:A75376; probable oligosaccharide deacetylase - Deinococcus; E=0.003 COG: BS_yjeA_2; COG0726 Predicted xylanase/chitin deacetylase; E=6e-05 PFAM: PF01522; Polysaccharide deacetylase; E=0.0029; endo-1,4-beta-xylanase 1867948..1868775 Rhodopirellula baltica SH 1 1792924 NP_865599.1 CDS nifU NC_005027.1 1868895 1869329 D PMID: 11016950 best DB hits: BLAST: gb:AAG20546.1; (AE005125) nitrogen fixation protein; NifU; E=2e-22 ddbj:BAB07187.1; (AP001518) nitrogen fixation protein [Bacillus; E=4e-16 swissprot:Q9X192; NIFU_THEMA NIFU-LIKE PROTEIN ----- pir:; E=4e-15 COG: VNG2472G; COG0822 NifU homologs involved in Fe-S cluster formation; E=2e-23 PFAM: PF01592; NifU-like N terminal domain; E=1e-22; nitrogen fixation protein NifU 1868895..1869329 Rhodopirellula baltica SH 1 1797071 NP_865600.1 CDS RB3597 NC_005027.1 1869326 1870621 D PMID: 9384377 PMID: 2644218 PMID: 3040672 PMID: 8464885 PMID: 8161529 best DB hits: BLAST: pir:T35993; probable aminotransferase - Streptomyces coelicolor; E=3e-98 pir:S76601; hypothetical protein - Synechocystis sp. (strain PCC; E=1e-97 pir:F70019; nifS protein homolog yurW - Bacillus subtilis -----; E=3e-95 COG: slr0077; COG0520 Selenocysteine lyase; E=1e-98 PFAM: PF00266; Aminotransferase class-V; E=7.2e-16; NifS protein homolog yurW 1869326..1870621 Rhodopirellula baltica SH 1 1795333 NP_865601.1 CDS xseA NC_005027.1 1870618 1871946 D PMID: 3021756 PMID: 6284744 PMID: 9278503 best DB hits: BLAST: gb:AAA24766.1; (J02599) Exonuclease VII large subunit; E=2e-56 swissprot:P04994; EX7L_ECOLI EXODEOXYRIBONUCLEASE VII LARGE; E=4e-56 pir:B82282; exodeoxyribonuclease VII, large chain VC0766 [imported]; E=2e-55 COG: xseA; COG1570 Exonuclease VII, large subunit; E=4e-57 PFAM: PF01336; OB-fold nucleic acid binding dom; E=3.6e-11 PF02601; Exonuclease VII, large subunit; E=3.5e-45; exodeoxyribonuclease VII large subunit 1870618..1871946 Rhodopirellula baltica SH 1 1794256 NP_865602.1 CDS kel NC_005027.1 1871888 1872985 D PMID: 8453663 PMID: 9118811 best DB hits: BLAST: gb:AAF53651.1; (AE003657) kel gene product [Drosophila; E=8e-17 swissprot:Q04652; KELC_DROME RING CANAL KELCH PROTEIN [CONTAINS:; E=8e-17 gb:AAA53471.1; (L08483) ring canal protein [Drosophila; E=1e-15 PFAM: PF01344; Kelch motif; E=2.6e-07; ring canal kelch protein 1871888..1872985 Rhodopirellula baltica SH 1 1795510 NP_865603.1 CDS RB3600 NC_005027.1 1873016 1873519 R signal peptide complement(1873016..1873519) Rhodopirellula baltica SH 1 1791077 NP_865604.1 CDS RB3601 NC_005027.1 1873531 1874262 R PMID: 8200539 best DB hits: BLAST: embl:CAB61821.1; (AL133236) polyguluronate lyase; E=1e-33 ddbj:BAA83339.1; (AB030481) polyguluronate lyase [Corynebacterium; E=7e-33 swissprot:Q59478; ALYA_KLEPN ALGINATE LYASE PRECURSOR; E=4e-08 PFAM: PF00217; ATP:guanido phosphotransferase; E=0.69; alginate lyase complement(1873531..1874262) Rhodopirellula baltica SH 1 1791826 NP_865605.1 CDS RB3603 NC_005027.1 1874427 1875461 R PMID: 9384377 best DB hits: BLAST: gb:AAB01192.1; (U55864) apical gut membrane polyprotein; E=0.015 embl:CAB60199.1; (AJ250881) P1a6 protein [Haemonchus contortus]; E=0.015 swissprot:P39839; YUXL_BACSU PROBABLE PEPTIDASE YUXL -----; E=0.034 COG: BS_yuxL; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; E=0.003 HI0382; COG0823 Periplasmic component of the Tol biopolymer; E=0.007; peptidase yuxL complement(1874427..1875461) Rhodopirellula baltica SH 1 1793585 NP_865606.1 CDS RB3605 NC_005027.1 1875637 1877481 R PMID: 9384377 best DB hits: BLAST: pir:H83386; conserved hypothetical protein PA2072 [imported] -; E=1e-82 swissprot:P55552; Y4LL_RHISN HYPOTHETICAL 91.8 KD PROTEIN Y4LL; E=9e-82 pir:C83070; conserved hypothetical protein PA4601 [imported] -; E=7e-81 COG: PA2072_4; COG2200 Diguanylate cyclase/phosphodiesterase domain 2; E=2e-52 yddU_3; COG2200 Diguanylate cyclase/phosphodiesterase domain 2 (EAL); E=1e-45 PA0575_4; COG2200 Diguanylate cyclase/phosphodiesterase domain 2; E=2e-44 PFAM: PF00072; Response regulator receiver doma; E=0.52 PF00990; GGDEF domain; E=2.2e-63 PF00563; Domain of unknown function 2; E=3.6e-67; response regulator complement(1875637..1877481) Rhodopirellula baltica SH 1 1790786 NP_865607.1 CDS fixL NC_005027.1 1877478 1879433 R PMID: 2046550 PMID: 1766374 best DB hits: BLAST: gb:AAD12184.1; (U57900) utilizing regulatory protein tutC; E=4e-13 swissprot:P26489; FIXL_AZOCA SENSOR PROTEIN FIXL ----- pir:; E=6e-13 ddbj:BAA89701.1; (AB030079) 145..153:the transposed position of; E=7e-13 COG: VNG1464G_1; COG2202 PAS/PAC domain; E=4e-11 BH0536; COG0642 Sensory transduction histidine kinases; E=4e-11 BS_ytvA_1; COG2202 PAS/PAC domain; E=2e-09 PFAM: PF00989; PAS domain; E=0.00031 PF00785; PAC motif; E=3e-08 PF02518; Histidine kinase-, DNA gyrase B-; E=8e-26; sensor protein fixL complement(1877478..1879433) Rhodopirellula baltica SH 1 1796596 NP_865608.1 CDS RB3607 NC_005027.1 1879436 1880029 R hypothetical protein complement(1879436..1880029) Rhodopirellula baltica SH 1 1790473 NP_865609.1 CDS RB3610 NC_005027.1 1880082 1880339 R hypothetical protein complement(1880082..1880339) Rhodopirellula baltica SH 1 1794110 NP_865610.1 CDS RB3611 NC_005027.1 1880300 1880452 D hypothetical protein 1880300..1880452 Rhodopirellula baltica SH 1 1791340 NP_865611.1 CDS RB3612 NC_005027.1 1880446 1881261 D PMID: 10984043 best DB hits: BLAST: embl:CAA98155.1; (Z73914) ORF378 protein [Pseudomonas stutzeri]; E=1e-15 pir:E83414; conserved hypothetical protein PA1854 [imported] -; E=2e-14 pir:S77003; hypothetical protein slr0789 - Synechocystis sp. (strain; E=1e-10; hypothetical protein 1880446..1881261 Rhodopirellula baltica SH 1 1793876 NP_865612.1 CDS RB3613 NC_005027.1 1881291 1881455 D hypothetical protein 1881291..1881455 Rhodopirellula baltica SH 1 1796693 NP_865613.1 CDS atoC NC_005027.1 1881510 1882976 R PMID: 8346225 PMID: 9278503 best DB hits: BLAST: swissprot:Q06065; ATOC_ECOLI ACETOACETATE METABOLISM REGULATORY; E=8e-80 swissprot:P21712; YFHA_ECOLI HYPOTHETICAL 49.1 KDA PROTEIN IN; E=3e-75 gb:AAG45333.1; AF273214_1 (AF273214) SasR [Myxococcus xanthus]; E=4e-74 COG: atoC; COG2204 AAA superfamily ATPases with N-terminal receiver; E=8e-81 PFAM: PF00072; Response regulator receiver doma; E=5.1e-26 PF00158; Sigma-54 interaction domain; E=2.8e-114; acetoacetate metabolism regulatory protein atoC complement(1881510..1882976) Rhodopirellula baltica SH 1 1790445 NP_865614.1 CDS atoS NC_005027.1 1882928 1884160 R PMID: 8346225 PMID: 9278503 best DB hits: BLAST: embl:CAB64771.1; (AJ007794) kin1 [Bacillus cereus] -----; E=3e-20 gb:AAD47812.1; (AF163841) histidine protein kinase; E=1e-19 pir:G82495; probable C4-dicarboxylate transport sensor protein; E=7e-19 COG: VCA0141; COG0642 Sensory transduction histidine kinases; E=7e-20 PFAM: PF00989; PAS domain; E=0.031 PF00785; PAC motif; E=1.5e-10 PF00512; His Kinase A (phosphoacceptor) doma; E=1.3e-12; sensor protein atoS complement(1882928..1884160) Rhodopirellula baltica SH 1 1794029 NP_865615.1 CDS RB3618 NC_005027.1 1884325 1884768 R hypothetical protein complement(1884325..1884768) Rhodopirellula baltica SH 1 1791608 NP_865616.1 CDS RB3621 NC_005027.1 1884713 1885000 D hypothetical protein 1884713..1885000 Rhodopirellula baltica SH 1 1791674 NP_865617.1 CDS nhaA NC_005027.1 1885051 1886373 D PMID: 2839489 PMID: 1657980 PMID: 1645730 PMID: 8381959 best DB hits: BLAST: pir:B71805; Na+H+-exchanging protein 1 - Helicobacter pylori; E=4e-73 pir:H64713; Na+H+-exchanging protein - Helicobacter pylori (strain; E=1e-72 pir:JX0360; Na+H+-exchanging protein - Vibrio parahaemolyticus; E=2e-65 COG: jhp1447; COG3004 Na+/H+ antiporter; E=4e-74; Na(+)/H(+) antiporter 1 1885051..1886373 Rhodopirellula baltica SH 1 1794060 NP_865618.1 CDS RB3623 NC_005027.1 1886488 1886670 R hypothetical protein complement(1886488..1886670) Rhodopirellula baltica SH 1 1790871 NP_865619.1 CDS RB3624 NC_005027.1 1886670 1886786 D hypothetical protein 1886670..1886786 Rhodopirellula baltica SH 1 1792414 NP_865620.1 CDS RB3625 NC_005027.1 1886871 1887470 D signal peptide 1886871..1887470 Rhodopirellula baltica SH 1 1795858 NP_865621.1 CDS RB3626 NC_005027.1 1887441 1887656 R hypothetical protein complement(1887441..1887656) Rhodopirellula baltica SH 1 1794450 NP_865622.1 CDS RB3627 NC_005027.1 1887640 1888482 R PMID: 10567266 best DB hits: BLAST: pir:G75469; conserved hypothetical protein - Deinococcus radiodurans; E=5e-33 swissprot:Q49757; YP69_MYCLE HYPOTHETICAL 31.1 KDA PROTEIN; E=4e-09 pir:E83429; conserved hypothetical protein PA1732 [imported] -; E=6e-09 COG: DR0843; COG1305 transglutaminases, cysteine; E=5e-34 PFAM: PF01841; Transglutaminase-like superfam; E=5.8e-16; hypothetical protein complement(1887640..1888482) Rhodopirellula baltica SH 1 1793897 NP_865623.1 CDS RB3630 NC_005027.1 1888468 1889409 D PMID: 10984043 best DB hits: BLAST: pir:D83354; hypothetical protein PA2331 [imported] - Pseudomonas; E=7e-26 pir:B81134; macrophage infectivity potentiator-related protein; E=2e-19 pir:D81888; hypothetical protein NMA1203 [imported] - Neisseria; E=4e-18 COG: PA2331; COG2128 Uncharacterized ACR; E=6e-27; hypothetical protein 1888468..1889409 Rhodopirellula baltica SH 1 1794325 NP_865624.1 CDS RB3632 NC_005027.1 1889505 1890254 D PMID: 8905231 best DB hits: BLAST: pir:S77301; hypothetical protein sll1308 - Synechocystis sp. (strain; E=2e-62 gb:AAD46515.1; AF145724_4 (AF145724) oxidoreductase homolog; E=2e-16 pir:T37016; probable oxidoreductase - Streptomyces coelicolor; E=2e-14 COG: sll1308; COG1028 Dehydrogenases with different specificities; E=2e-63 Rv3174; COG1028 Dehydrogenases with different specificities (related; E=4e-14 slr0315; COG1028 Dehydrogenases with different specificities; E=1e-10 PFAM: PF00107; Zinc-binding dehydrogenases; E=0.013 PF00106; short chain dehydrogenase; E=2.2e-34; short chain dehydrogenase 1889505..1890254 Rhodopirellula baltica SH 1 1792210 NP_865625.1 CDS RB3633 NC_005027.1 1890211 1890483 R hypothetical protein complement(1890211..1890483) Rhodopirellula baltica SH 1 1792148 NP_865626.1 CDS RB3634 NC_005027.1 1890438 1890641 R hypothetical protein complement(1890438..1890641) Rhodopirellula baltica SH 1 1793811 NP_865627.1 CDS RB3635 NC_005027.1 1890589 1891878 D PMID: 8843436 best DB hits: BLAST: embl:CAB94634.1; (AL359215) secreted glycosyl hydrolase.; E=4e-06 pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=3e-05 pir:T35028; probable glycosyl hydrolase - Streptomyces coelicolor; E=2e-04; secreted glycosyl hydrolase 1890589..1891878 Rhodopirellula baltica SH 1 1790263 NP_865628.1 CDS RB3639 NC_005027.1 1891875 1892711 D PMID: 9384377 best DB hits: BLAST: pir:C69797; conserved hypothetical protein yesT - Bacillus subtilis; E=4e-27 gb:AAF25818.1; AF184175_1 (AF184175) cephalosporin C deacetylase; E=2e-23 pir:H69797; rhamnogalacturonan acetylesterase homolog yesY -; E=2e-22; hypothetical protein 1891875..1892711 Rhodopirellula baltica SH 1 1796107 NP_865629.1 CDS RB3641 NC_005027.1 1892708 1894723 D PMID: 9384377 best DB hits: BLAST: swissprot:O34499; YKGB_BACSU HYPOTHETICAL 38.4 KDA PROTEIN IN; E=2e-41 embl:CAB66198.1; (AL136502) hypothetical protein SCF43.09.; E=2e-41 pir:A83120; conserved hypothetical protein PA4204 [imported] -; E=9e-41 COG: BS_ykgB; COG2706 3-carboxymuconate cyclase; E=2e-42 PFAM: PF01453; Lectin (probable mannose binding); E=0.047; cycloisomerase 1892708..1894723 Rhodopirellula baltica SH 1 1792978 NP_865630.1 CDS RB3644 NC_005027.1 1894801 1895184 R hypothetical protein complement(1894801..1895184) Rhodopirellula baltica SH 1 1791453 NP_865631.1 CDS RB3645 NC_005027.1 1895230 1895505 R hypothetical protein complement(1895230..1895505) Rhodopirellula baltica SH 1 1795050 NP_865632.1 CDS RB3646 NC_005027.1 1895252 1895407 D hypothetical protein 1895252..1895407 Rhodopirellula baltica SH 1 1796295 NP_865633.1 CDS RB3647 NC_005027.1 1895295 1895447 R hypothetical protein complement(1895295..1895447) Rhodopirellula baltica SH 1 1792809 NP_865634.1 CDS RB3648 NC_005027.1 1895481 1896881 R best DB hits: BLAST: pir:T36464; probable oxidoreductase - Streptomyces coelicolor; E=3e-07 ddbj:BAB05884.1; (AP001514) BH2165~unknown conserved protein; E=6e-06 ddbj:BAB04206.1; (AP001508) BH0487~unknown conserved protein; E=3e-05 COG: BH2165; COG0673 Predicted dehydrogenases and related proteins; E=6e-07 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=6e-18; oxidoreductase complement(1895481..1896881) Rhodopirellula baltica SH 1 1794006 NP_865635.1 CDS RB3650 NC_005027.1 1896821 1897060 D hypothetical protein 1896821..1897060 Rhodopirellula baltica SH 1 1794103 NP_865636.1 CDS RB3651 NC_005027.1 1896937 1897104 D hypothetical protein 1896937..1897104 Rhodopirellula baltica SH 1 1790851 NP_865637.1 CDS RB3653 NC_005027.1 1897256 1898083 D PMID: 10952301 best DB hits: BLAST: pir:F82388; transcriptional regulator AraCXylS family VCA1001; E=3e-25 pir:C83237; probable transcriptional regulator PA3269 [imported] -; E=2e-24 embl:CAB88172.1; (AL352972) araC-family regulatory; E=1e-23 COG: VCA1001; COG2207 AraC-type DNA-binding domain-containing proteins; E=2e-26 PFAM: PF00165; Bacterial regulatory helix-turn-heli; E=3e-20; transcriptional regulator 1897256..1898083 Rhodopirellula baltica SH 1 1794127 NP_865638.1 CDS RB3654 NC_005027.1 1898112 1898300 D hypothetical protein 1898112..1898300 Rhodopirellula baltica SH 1 1794012 NP_865639.1 CDS RB3655 NC_005027.1 1898244 1898435 R hypothetical protein complement(1898244..1898435) Rhodopirellula baltica SH 1 1793037 NP_865640.1 CDS RB3656 NC_005027.1 1898389 1899330 D PMID: 9349712 PMID: 10639368 best DB hits: BLAST: gb:AAF01818.1; AF187532_14 (AF187532) polyketide cyclase; E=6e-05 pir:D70817; hypothetical protein Rv1716 - Mycobacterium tuberculosis; E=0.17 gb:AAG30196.1; (AF293442) cyclase [Streptomyces sp. R1128]; E=0.33; polyketide cyclase/dehydrase 1898389..1899330 Rhodopirellula baltica SH 1 1796719 NP_865641.1 CDS RB3657 NC_005027.1 1899390 1900178 D PMID: 1556094 PMID: 9384377 best DB hits: BLAST: pir:E70027; probable 3-oxoacyl-[acyl-carrier-protein] reductase (EC; E=6e-73 pir:H83476; probable short-chain dehydrogenase PA1344 [imported] -; E=7e-62 embl:CAB60468.1; (AL132856) probable oxidoreductase [Streptomyces; E=8e-54 COG: BS_yvaG; COG1028 Dehydrogenases with different specificities; E=6e-74 PA1344; COG1028 Dehydrogenases with different specificities (related; E=7e-63 BS_yvrD; COG1028 Dehydrogenases with different specificities; E=3e-54 PFAM: PF00106; short chain dehydrogenase; E=1.9e-41 PF00678; Short chain dehydrogenase/reduct; E=3.3e-08; 3-oxoacyl-ACP reductase 1899390..1900178 Rhodopirellula baltica SH 1 1790888 NP_865642.1 CDS RB3658 NC_005027.1 1900175 1900393 R hypothetical protein complement(1900175..1900393) Rhodopirellula baltica SH 1 1792381 NP_865643.1 CDS RB3659 NC_005027.1 1900428 1900607 D signal peptide 1900428..1900607 Rhodopirellula baltica SH 1 1790605 NP_865644.1 CDS RB3660 NC_005027.1 1900570 1900854 R hypothetical protein complement(1900570..1900854) Rhodopirellula baltica SH 1 1790900 NP_865645.1 CDS RB3661 NC_005027.1 1900902 1901810 R hypothetical protein complement(1900902..1901810) Rhodopirellula baltica SH 1 1789994 NP_865646.1 CDS RB3662 NC_005027.1 1901893 1902024 R hypothetical protein complement(1901893..1902024) Rhodopirellula baltica SH 1 1791650 NP_865647.1 CDS RB3663 NC_005027.1 1902119 1902328 R hypothetical protein complement(1902119..1902328) Rhodopirellula baltica SH 1 1795370 NP_865648.1 CDS RB3664 NC_005027.1 1902304 1902561 D hypothetical protein 1902304..1902561 Rhodopirellula baltica SH 1 1791708 NP_865649.1 CDS RB3665 NC_005027.1 1902717 1903076 R hypothetical protein complement(1902717..1903076) Rhodopirellula baltica SH 1 1796706 NP_865650.1 CDS RB3668 NC_005027.1 1903100 1903270 R hypothetical protein complement(1903100..1903270) Rhodopirellula baltica SH 1 1794553 NP_865651.1 CDS RB3669 NC_005027.1 1903269 1903577 D hypothetical protein 1903269..1903577 Rhodopirellula baltica SH 1 1792357 NP_865652.1 CDS RB3670 NC_005027.1 1903537 1903998 R PMID: 2824781 best DB hits: BLAST: gb:AAK04755.1; AE006299_1 (AE006299) transposase of IS981C; E=1e-09 gb:AAK05346.1; AE006357_1 (AE006357) transposase of IS981G; E=1e-09 gb:AAK06124.1; AE006432_6 (AE006432) transposase of IS981J; E=1e-09 COG: PA0257; COG2801 transposase; E=1e-07 yagA; COG1425 Predicted transposase; E=6e-05 HI1721; COG2801 transposase; E=9e-05 PFAM: PF00665; Integrase core domain; E=2.5e-27; transposase of IS981C complement(1903537..1903998) Rhodopirellula baltica SH 1 1792195 NP_865653.1 CDS RB3672 NC_005027.1 1904022 1904294 D hypothetical protein 1904022..1904294 Rhodopirellula baltica SH 1 1790378 NP_865654.1 CDS RB3673 NC_005027.1 1904396 1904647 R best DB hits: PFAM: PF00501; AMP-binding enzyme; E=0.031; hypothetical protein complement(1904396..1904647) Rhodopirellula baltica SH 1 1790230 NP_865655.1 CDS RB3675 NC_005027.1 1904552 1906780 D best DB hits: BLAST: embl:CAA84826.1; (Z35768) ORF YBL007c [Saccharomyces cerevisiae]; E=0.22; signal peptide 1904552..1906780 Rhodopirellula baltica SH 1 1796292 NP_865656.1 CDS apbE NC_005027.1 1906968 1907591 D PMID: 9473043 best DB hits: BLAST: embl:CAB53356.1; (AJ010260) NosX protein [Paracoccus; E=6e-14 gb:AAD09162.2; (AF047429) NosX [Achromobacter cycloclastes]; E=1e-13 pir:F81184; thiamin biosynthesis lipoprotein ApbE NMB0563 [imported]; E=1e-12 COG: NMB0563; COG1477 Membrane-associated lipoprotein involved in; E=1e-13 VC2289; COG1477 Membrane-associated lipoprotein involved in thiamine; E=2e-13 aq_1258; COG1477 Membrane-associated lipoprotein involved in; E=1e-09 PFAM: PF02424; ApbE family; E=2.7e-28; thiamin biosynthesis lipoprotein apbE 1906968..1907591 Rhodopirellula baltica SH 1 1790443 NP_865657.1 CDS RB3680 NC_005027.1 1907555 1908097 D PMID: 20437337 best DB hits: BLAST: pir:B83125; conserved hypothetical protein PA4169 [imported] -; E=5e-32 embl:CAB71827.1; (AL138662) hypothetical protein SC8E4A.22; E=2e-14 pir:D70063; hypothetical protein ywnA - Bacillus subtilis -----; E=8e-08 COG: PA4169; COG1959 Predicted transcriptional regulator; E=5e-33 PFAM: PF02082; Uncharacterized protein family UPF00; E=0.0035; hypothetical protein 1907555..1908097 Rhodopirellula baltica SH 1 1790973 NP_865658.1 CDS RB3681 NC_005027.1 1908081 1908776 D PMID: 10086842 best DB hits: BLAST: pir:T44299; hypothetical protein ycgJ [imported] - Bacillus; E=2e-25 ddbj:BAB04377.1; (AP001509) BH0658~unknown conserved protein; E=2e-25 pir:G83392; hypothetical protein PA2034 [imported] - Pseudomonas; E=1e-08 COG: BH0658; COG0500 SAM-dependent methyltransferases; E=2e-26 DR2405; COG2226 Methylase involved in ubiquinone/menaquinone; E=5e-04 PA3515; COG0500 SAM-dependent methyltransferases; E=0.002; hypothetical protein 1908081..1908776 Rhodopirellula baltica SH 1 1796997 NP_865659.1 CDS RB3682 NC_005027.1 1908788 1909108 D hypothetical protein 1908788..1909108 Rhodopirellula baltica SH 1 1791093 NP_865660.1 CDS RB3683 NC_005027.1 1909087 1909212 D hypothetical protein 1909087..1909212 Rhodopirellula baltica SH 1 1793885 NP_865661.1 CDS RB3684 NC_005027.1 1909183 1909380 R hypothetical protein complement(1909183..1909380) Rhodopirellula baltica SH 1 1792962 NP_865662.1 CDS RB3686 NC_005027.1 1909540 1910523 R PMID: 8843436 best DB hits: BLAST: embl:CAC14345.1; (AL445945) zinc-binding oxidoreductase; E=2e-32 pir:C70418; probable alcohol dehydrogenase (EC 1.1.1.-) - Aquifex; E=4e-28 embl:CAB70647.1; (AL137242) zinc-binding oxidoreductase; E=2e-27 COG: aq_1362; COG0604 NADPH:quinone reductase and related Zn-dependent; E=3e-29 PFAM: PF00696; Amino acid kinase; E=0.7 PF00107; Zinc-binding dehydrogenases; E=2.2e-72; zinc-binding oxidoreductase complement(1909540..1910523) Rhodopirellula baltica SH 1 1796889 NP_865663.1 CDS RB3688 NC_005027.1 1910468 1910629 R hypothetical protein complement(1910468..1910629) Rhodopirellula baltica SH 1 1790507 NP_865664.1 CDS RB3689 NC_005027.1 1910656 1911402 R PMID: 10984043 best DB hits: BLAST: pir:C83343; probable hydrolase PA2419 [imported] - Pseudomonas; E=6e-66 gb:AAD16957.1; (AF106566) SlsA [Salmonella typhimurium]; E=2e-62 pdb:1YAC; A Chain A, The 1.8 Angstrom Crystal Structure Of The; E=6e-42 COG: PA2419; COG1335 Amidases related to nicotinamidase; E=6e-67 PFAM: PF00857; Isochorismatase; E=7e-11; hydrolase of unknown specificity complement(1910656..1911402) Rhodopirellula baltica SH 1 1790233 NP_865665.1 CDS RB3692 NC_005027.1 1911487 1912413 R PMID: 10543838 best DB hits: BLAST: pir:E83158; probable transcriptional regulator PA3898 [imported] -; E=1e-17 ddbj:BAA86295.1; (AB006902) XylsAraC-type transcriptional; E=2e-17 pir:S77548; lumQ protein - Synechocystis sp. (strain PCC 6803); E=4e-16 COG: PA3898; COG2207 AraC-type DNA-binding domain-containing proteins; E=1e-18 PFAM: PF00165; Bacterial regulatory helix-turn-heli; E=8e-24; AraC family transcriptional regulator complement(1911487..1912413) Rhodopirellula baltica SH 1 1797119 NP_865666.1 CDS RB3693 NC_005027.1 1912410 1912649 R hypothetical protein complement(1912410..1912649) Rhodopirellula baltica SH 1 1796289 NP_865667.1 CDS RB3694 NC_005027.1 1912676 1913521 R PMID: 9143122 best DB hits: BLAST: swissprot:O05691; THCF_RHOER NON-HEME HALOPEROXIDASE ----- gb:; E=1e-113 swissprot:P25026; PRXC_PSEPY NON-HEME CHLOROPEROXIDASE (CHLORIDE; E=1e-111 pir:G83304; chloroperoxidase precursor PA2717 [imported] -; E=1e-106 COG: PA2717; COG0596 Predicted hydrolases or acyltransferases (alpha/beta; E=1e-107 slr0314; COG0596 Predicted hydrolases or acyltransferases; E=4e-49 AF0865; COG0596 Predicted hydrolases or acyltransferases (alpha/beta; E=3e-12 PFAM: PF02230; Phospholipase/Carboxylesterase; E=0.035 PF00561; alpha/beta hydrolase fold; E=3.5e-40; non-heme chloroperoxidase complement(1912676..1913521) Rhodopirellula baltica SH 1 1796253 NP_865668.1 CDS RB3695 NC_005027.1 1913487 1913618 D hypothetical protein 1913487..1913618 Rhodopirellula baltica SH 1 1795613 NP_865669.1 CDS RB3696 NC_005027.1 1913742 1914149 R PMID: 10567266; signal peptide complement(1913742..1914149) Rhodopirellula baltica SH 1 1791186 NP_865670.1 CDS RB3697 NC_005027.1 1914197 1914445 D hypothetical protein 1914197..1914445 Rhodopirellula baltica SH 1 1791816 NP_865671.1 CDS RB3698 NC_005027.1 1914515 1914778 R PMID: 11759840 best DB hits: BLAST: embl:CAA74280.1; (Y13942) GTN Reductase [Agrobacterium; E=1e-14 pir:C82391; N-ethylmaleimide reductase VCA0993 [imported] - Vibrio; E=2e-14 gb:AAD16106.1; (AF093246) NAD(P)H-dependent 2-cyclohexen-1-one; E=2e-13 COG: VCA0993; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme; E=2e-15 nemA; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family; E=4e-10 YPL171c; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme; E=7e-10 PFAM: PF00724; NADH:flavin oxidoreductase / NAD; E=3.3e-21; hypothetical protein complement(1914515..1914778) Rhodopirellula baltica SH 1 1791622 NP_865672.1 CDS RB3700 NC_005027.1 1914854 1915327 R PMID: 10984043 best DB hits: BLAST: pir:D83102; xenobiotic reductase PA4356 [imported] - Pseudomonas; E=1e-33 gb:AAD16106.1; (AF093246) NAD(P)H-dependent 2-cyclohexen-1-one; E=6e-32 ddbj:BAA88211.1; (AB025798) NAD(P)H-dependent 2-cyclohexen-1-one; E=1e-31 COG: PA4356; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme; E=1e-34 nemA; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family; E=1e-27 VCA0998; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme; E=8e-26 PFAM: PF00724; NADH:flavin oxidoreductase / NAD; E=2e-38; hypothetical protein complement(1914854..1915327) Rhodopirellula baltica SH 1 1789940 NP_865673.1 CDS RB3701 NC_005027.1 1915292 1915474 D hypothetical protein 1915292..1915474 Rhodopirellula baltica SH 1 1795602 NP_865674.1 CDS RB3702 NC_005027.1 1915478 1915789 D PMID: 10567266 best DB hits: BLAST: pir:D75588; transcriptional regulator, HTH_1 family - Deinococcus; E=1e-15 swissprot:Q04778; ALSR_BACSU ALS OPERON REGULATORY PROTEIN -----; E=3e-15 pir:A83017; probable transcriptional regulator PA5029 [imported] -; E=6e-15 COG: DRA0336; COG0583 Transcriptional regulator; E=1e-16 PFAM: PF00126; Bacterial regulatory helix-turn-heli; E=1.7e-25; transcriptional regulator 1915478..1915789 Rhodopirellula baltica SH 1 1791145 NP_865675.1 CDS RB3703 NC_005027.1 1915847 1916425 D PMID: 10496884 best DB hits: BLAST: gb:AAD54118.1; AF134978_1 (AF134978) transcriptional; E=1e-10 pir:T47029; hypothetical protein [imported] - Yersinia pestis; E=3e-10 gb:AAC79916.1; (U93090) LysR-type regulatory protein [Comamonas; E=1e-08 COG: PA5029; COG0583 Transcriptional regulator; E=1e-07; transcriptional regulator 1915847..1916425 Rhodopirellula baltica SH 1 1794047 NP_865676.1 CDS apbE NC_005027.1 1916890 1917948 D PMID: 7542800 best DB hits: BLAST: swissprot:P44550; APBE_HAEIN THIAMINE BIOSYNTHESIS LIPOPROTEIN; E=2e-24 pir:D72239; conserved hypothetical protein - Thermotoga maritima; E=7e-24 gb:AAK03418.1; (AE006171) ApbE [Pasteurella multocida]; E=4e-23 COG: HI0172; COG1477 Membrane-associated lipoprotein involved in thiamine; E=2e-25 NMB0563; COG1477 Membrane-associated lipoprotein involved in; E=6e-22 XF0594; COG1477 Membrane-associated lipoprotein involved in thiamine; E=2e-20 PFAM: PF02424; ApbE family; E=3.5e-52; thiamine biosynthesis lipoprotein apbE [precursor] 1916890..1917948 Rhodopirellula baltica SH 1 1793339 NP_865677.1 CDS RB3707 NC_005027.1 1918042 1918668 D hypothetical protein 1918042..1918668 Rhodopirellula baltica SH 1 1797112 NP_865678.1 CDS speA NC_005027.1 1918712 1920718 D catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase 1918712..1920718 Rhodopirellula baltica SH 1 1797121 NP_865679.1 CDS RB3710 NC_005027.1 1920808 1922382 D PMID: 10484179 best DB hits: BLAST: ddbj:BAB04808.1; (AP001510) BH1089~unknown conserved protein; E=1e-160 swissprot:P54608; YHCX_BACSU HYPOTHETICAL 60.2 KD PROTEIN IN; E=1e-156 pir:JC4601; hypothetical 48.2k protein - Sphingomonas yanoikuyae; E=5e-76 COG: BH1089_2; COG0388 Predicted amidohydrolase; E=1e-101 BH1089_1; COG0454 Histone acetyltransferase HPA2 and related; E=5e-52 DR2433; COG0388 Predicted amidohydrolase; E=7e-26 PFAM: PF00583; Acetyltransferase (GNAT) family; E=0.0021 PF00795; Carbon-nitrogen hydrolase; E=1.3e-32; hypothetical protein 1920808..1922382 Rhodopirellula baltica SH 1 1796825 NP_865680.1 CDS RB3711 NC_005027.1 1922334 1922480 R hypothetical protein complement(1922334..1922480) Rhodopirellula baltica SH 1 1797005 NP_865681.1 CDS RB3713 NC_005027.1 1922549 1923307 R signal peptide complement(1922549..1923307) Rhodopirellula baltica SH 1 1795585 NP_865682.1 CDS fabB NC_005027.1 1923477 1924871 R PMID: 10484179 best DB hits: BLAST: ddbj:BAB06601.1; (AP001517) 3-oxoacyl-(acyl-carrier protein); E=4e-12 pir:G69842; 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); E=5e-11 pir:C72335; 3-oxoacyl-(acyl carrier protein) synthase II -; E=6e-10 COG: BH2882; COG0304 3-oxoacyl-(acyl-carrier-protein) synthase I; E=4e-13 PFAM: PF00109; Beta-ketoacyl synthase, N-ter; E=0.00032 PF02801; Beta-ketoacyl synthase, C-ter; E=1.2e-08; 3-oxoacyl-ACP synthase complement(1923477..1924871) Rhodopirellula baltica SH 1 1790950 NP_865683.1 CDS RB3716 NC_005027.1 1924959 1925378 R PMID: 10984043 best DB hits: BLAST: pir:G83495; hypothetical protein PA1203 [imported] - Pseudomonas; E=2e-05 embl:CAC04241.1; (AL391515) hypothetical protein SC4B10.36c; E=0.001 embl:CAB87336.1; (AL163672) hypothetical protein SCE50.14c; E=0.006 COG: PA1203; COG1765 Uncharacterized ACR; E=2e-06; hypothetical protein complement(1924959..1925378) Rhodopirellula baltica SH 1 1795937 NP_865684.1 CDS RB3718 NC_005027.1 1925507 1927114 R best DB hits: BLAST: pir:T27128; hypothetical protein Y53C12A.2 - Caenorhabditis elegans; E=0.79; signal peptide complement(1925507..1927114) Rhodopirellula baltica SH 1 1792445 NP_865685.1 CDS RB3719 NC_005027.1 1927075 1927500 R hypothetical protein complement(1927075..1927500) Rhodopirellula baltica SH 1 1796710 NP_865686.1 CDS RB3723 NC_005027.1 1927424 1927942 R hypothetical protein complement(1927424..1927942) Rhodopirellula baltica SH 1 1791543 NP_865687.1 CDS rpoS NC_005027.1 1927875 1928942 D PMID: 11466270 best DB hits: BLAST: gb:AAF20816.1; AF198628_2 (AF198628) RpoS [Xenorhabdus; E=7e-48 gb:AAG14981.1; AF242209_6 (AF242209) alternative sigma factor; E=3e-47 gb:AAG53883.1; AF275947_2 (AF275947) sigma factor RpoS; E=3e-47 COG: VC0534; COG0568 DNA-directed RNA polymerase sigma subunits; E=8e-48 PFAM: PF00140; Sigma-70 factor; E=1.3e-77; RNA polymerase sigma factor rpoS 1927875..1928942 Rhodopirellula baltica SH 1 1795356 NP_865688.1 CDS RB3729 NC_005027.1 1929020 1930213 R PMID: 9767151 best DB hits: BLAST: pir:A55541; heterocyst maturation protein devA - Anabaena sp.; E=4e-54 embl:CAA05977.1; (AJ003195) ATP-binding subunit [Anabaena; E=1e-53 pir:S76632; hypothetical protein - Synechocystis sp. (strain PCC; E=2e-49 COG: sll0484; COG1136 ABC-type (unclassified) transport system, ATPase; E=2e-50 PA2350; COG1135 Uncharacterized ABC-type transport system ATPase; E=6e-26 TM0352; COG1136 ABC-type (unclassified) transport system, ATPase; E=2e-25 PFAM: PF01583; Adenylylsulfate kinase; E=0.19 PF00005; ABC transporter; E=3.2e-50 PF00027; Cyclic nucleotide-binding domain; E=1.6e-20; ABC transporter ATP-binding protein complement(1929020..1930213) Rhodopirellula baltica SH 1 1791288 NP_865689.1 CDS RB3730 NC_005027.1 1930294 1931586 D PMID: 11759840 best DB hits: BLAST: pir:S76813; hypothetical protein sll1481 - Synechocystis sp. (strain; E=7e-07 embl:CAA59428.1; (X85107) alpha3a subunit of laminin 5 [Homo; E=0.040 embl:CAA59429.1; (X85108) alpha3b subunit of laminin 5 [Homo; E=0.040 COG: sll1481; COG0845 Membrane-fusion protein; E=6e-08 PFAM: PF00364; Biotin-requiring enzyme; E=0.26; hypothetical protein 1930294..1931586 Rhodopirellula baltica SH 1 1790030 NP_865690.1 CDS RB3732 NC_005027.1 1931583 1932827 D best DB hits: BLAST: pir:S76812; hypothetical protein - Synechocystis sp. (strain PCC; E=3e-33 embl:CAA67986.1; (X99672) devC [Anabaena sp.]; E=3e-32 embl:CAA05976.1; (AJ003195) membrane spanning subunit [Anabaena; E=1e-31 PFAM: PF02687; Predicted permease; E=1.1e-09; hypothetical protein 1931583..1932827 Rhodopirellula baltica SH 1 1796182 NP_865691.1 CDS RB3733 NC_005027.1 1932841 1933851 R PMID: 9174344 best DB hits: BLAST: pir:G82785; dTDP-glucose 4-6-dehydratase XF0611 [imported] - Xylella; E=1e-116 pir:S75550; dTDP-glucose 4-6-dehydratase - Synechocystis sp. (strain; E=1e-114 pir:T00419; dTDP-glucose 4-6-dehydratase homolog T30B22.4 -; E=1e-101 COG: XF0611; COG0451 Nucleoside-diphosphate-sugar epimerases; E=1e-117 MTH1789; COG1088 dTDP-D-glucose 4,6-dehydratase; E=2e-21 PA3554_2; COG0451 Nucleoside-diphosphate-sugar epimerases; E=3e-21 PFAM: PF01073; 3-beta hydroxysteroid dehydrogenase; E=0.0012 PF00106; short chain dehydrogenase; E=0.0069 PF01370; NAD dependent epimerase/dehydratase; E=3e-14; dTDP-glucose 4-6-dehydratase complement(1932841..1933851) Rhodopirellula baltica SH 1 1792364 NP_865692.1 CDS RB3734 NC_005027.1 1933834 1933998 D hypothetical protein 1933834..1933998 Rhodopirellula baltica SH 1 1795833 NP_865693.1 CDS panC NC_005027.1 1934121 1934972 R PMID: 10360571 best DB hits: BLAST: swissprot:O86953; PANC_THENE PANTOATE--BETA-ALANINE LIGASE; E=2e-61 swissprot:Q9X0G6; PANC_THEMA PANTOATE--BETA-ALANINE LIGASE; E=2e-60 gb:AAG61078.1; AF322013_197 (AF322013) ID912 [Bradyrhizobium; E=9e-58 COG: TM1077; COG0414 Pantoate-beta-alanine ligase; E=2e-61 PFAM: PF02569; Pantoate-beta-alanine ligase; E=5.1e-126; pantoate--beta-alanine ligase complement(1934121..1934972) Rhodopirellula baltica SH 1 1796897 NP_865694.1 CDS RB3739 NC_005027.1 1935052 1935471 R PMID: 9389475 best DB hits: BLAST: gb:AAB90131.1; (AE001027) conserved hypothetical protein; E=3e-15 pir:A70326; conserved hypothetical protein aq_283 - Aquifex aeolicus; E=4e-14 pir:S77403; conserved hypothetical protein sll1142 - Synechocystis; E=1e-12 COG: AF1107; COG1259 Uncharacterized ACR; E=3e-16 PFAM: PF02577; Uncharacterized ACR, COG1259; E=3.9e-26; hypothetical protein complement(1935052..1935471) Rhodopirellula baltica SH 1 1792164 NP_865695.1 CDS RB3741 NC_005027.1 1935468 1935782 R hypothetical protein complement(1935468..1935782) Rhodopirellula baltica SH 1 1794541 NP_865696.1 CDS fliC NC_005027.1 1935693 1937849 D PMID: 8752337 best DB hits: BLAST: pir:D72335; flagellin - Thermotoga maritima (strain MSB8) -----; E=4e-18 swissprot:P02968; FLA_BACSU FLAGELLIN ----- pir: FLBS68; E=6e-18 gb:AAC27808.1; (AF069392) polar flagellin [Vibrio; E=6e-18 COG: TM0758; COG1344 Flagellin and related hook-associated proteins; E=4e-19 PFAM: PF00669; Bacterial flagellin N-terminus; E=2.8e-27 PF00700; Bacterial flagellin C-terminus; E=2.1e-17; flagellin E 1935693..1937849 Rhodopirellula baltica SH 1 1791079 NP_865697.1 CDS RB3744 NC_005027.1 1937999 1938292 R best DB hits: PFAM: PF02617; Uncharacterized ACR, COG2127; E=0.12; hypothetical protein complement(1937999..1938292) Rhodopirellula baltica SH 1 1792393 NP_865698.1 CDS RB3745 NC_005027.1 1938018 1938329 D hypothetical protein 1938018..1938329 Rhodopirellula baltica SH 1 1795775 NP_865699.1 CDS RB3746 NC_005027.1 1938122 1938352 D hypothetical protein 1938122..1938352 Rhodopirellula baltica SH 1 1794694 NP_865700.1 CDS RB3747 NC_005027.1 1938177 1938407 R hypothetical protein complement(1938177..1938407) Rhodopirellula baltica SH 1 1796235 NP_865701.1 CDS fliS NC_005027.1 1938427 1938918 D PMID: 10360571 best DB hits: BLAST: pir:F72286; flagellar protein FliS - Thermotoga maritima (strain; E=5e-05 COG: TM1179; COG1516 Flagellar protein; E=5e-06 PFAM: PF02561; Flagellar protein FliS; E=0.57; flagellar protein FliS 1938427..1938918 Rhodopirellula baltica SH 1 1796027 NP_865702.1 CDS RB3751 NC_005027.1 1938953 1940068 D PMID: 9174344 best DB hits: BLAST: gb:AAB84886.1; (AE000823) UDP-glucose 4-epimerase homolog; E=4e-65 pir:C69149; conserved hypothetical protein MTH380 - Methanobacterium; E=4e-65 gb:AAG18703.1; (AE004975) GDP-D-mannose dehydratase; Gmd; E=9e-61 COG: MTH380; COG0451 Nucleoside-diphosphate-sugar epimerases; E=4e-66 aq_1069; COG1087 UDP-glucose 4-epimerase; E=1e-26 PFAM: PF00106; short chain dehydrogenase; E=0.0021 PF01073; 3-beta hydroxysteroid dehydrogenase; E=1.3e-07 PF01370; NAD dependent epimerase/dehydratase; E=3.7e-88; UDP-glucose 4-epimerase-like protein 1938953..1940068 Rhodopirellula baltica SH 1 1792479 NP_865703.1 CDS RB3753 NC_005027.1 1940053 1940232 D hypothetical protein 1940053..1940232 Rhodopirellula baltica SH 1 1792117 NP_865704.1 CDS RB3755 NC_005027.1 1940193 1941626 D PMID: 8244397 PMID: 8325651 best DB hits: BLAST: gb:AAA16877.1; (L13329) iduronate-2-sulfatase [Homo sapiens]; E=2e-42 gb:AAB33747.1; iduronate-2-sulfatase, IDS {EC 3.1.6.13} [human,; E=1e-41 gb:AAA59192.1; (L04586) iduronate 2-sulfatase [Homo sapiens]; E=2e-40 COG: PA2333; COG3119 Arylsulfatase A and related enzymes; E=6e-37 yejM; COG3083 Predicted hydrolase of alkaline phosphatase; E=9e-07 BS_yfnI; COG1368 Phosphoglycerol transferase and related proteins,; E=3e-06 PFAM: PF00884; Sulfatase; E=4.9e-29; iduronate-2-sulfatase 1940193..1941626 Rhodopirellula baltica SH 1 1790138 NP_865705.1 CDS RB3758 NC_005027.1 1941623 1941730 R hypothetical protein complement(1941623..1941730) Rhodopirellula baltica SH 1 1796817 NP_865706.1 CDS RB3760 NC_005027.1 1941894 1942169 R hypothetical protein complement(1941894..1942169) Rhodopirellula baltica SH 1 1796220 NP_865707.1 CDS glpK NC_005027.1 1942292 1943911 D PMID: 9972265 best DB hits: BLAST: pir:G75337; glycerol kinase - Deinococcus radiodurans (strain R1); E=1e-169 pir:C72254; glycerol kinase - Thermotoga maritima (strain MSB8); E=1e-155 swissprot:Q9X1E4; GLK2_THEMA GLYCEROL KINASE 2 (ATP:GLYCEROL; E=1e-155 COG: DR1928; COG0554 Glycerol kinase; E=1e-170 PFAM: PF00370; FGGY family of carbohydrate kinases; E=3.8e-107 PF02782; FGGY family of carbohydrate kinases; E=6.7e-83; glycerol kinase 1942292..1943911 Rhodopirellula baltica SH 1 1791788 NP_865708.1 CDS glpA NC_005027.1 1943977 1945569 D PMID: 7821823 best DB hits: BLAST: pir:C75448; glycerol-3-phosphate dehydrogenase - Deinococcus; E=1e-112 pir:C70130; glycerol-3-phosphate dehydrogenase, anaerobic (glpA); E=4e-83 gb:AAF02807.1; AC009400_3 (AC009400) glycerol-3-phosphate; E=2e-82 COG: DR1019; COG0578 Glycerol-3-phosphate dehydrogenase; E=1e-113 PFAM: PF02737; 3-hydroxyacyl-CoA dehydrogenase; E=0.61 PF00070; Pyridine nucleotide-disulphide; E=0.036 PF02032; Phytoene dehydrogenase related; E=0.11; glycerol-3-phosphate dehydrogenase 1943977..1945569 Rhodopirellula baltica SH 1 1795517 NP_865709.1 CDS RB3764 NC_005027.1 1945643 1946725 R PMID: 11259647; signal peptide complement(1945643..1946725) Rhodopirellula baltica SH 1 1793635 NP_865710.1 CDS RB3765 NC_005027.1 1946653 1946946 R hypothetical protein complement(1946653..1946946) Rhodopirellula baltica SH 1 1794474 NP_865711.1 CDS leuB NC_005027.1 1946949 1948043 D PMID: 3110742 best DB hits: BLAST: pir:D75045; 3-isopropylmalate dehydrogenase (leub) PAB2424 -; E=2e-52 swissprot:O66607; LEU3_AQUAE 3-ISOPROPYLMALATE DEHYDROGENASE; E=6e-51 swissprot:Q9WZ26; LEU3_THEMA 3-ISOPROPYLMALATE DEHYDROGENASE; E=2e-49 COG: PAB2424; COG0473 Isocitrate/isopropylmalate dehydrogenase; E=2e-53 PFAM: PF00180; Isocitrate and isopropylmalate dehyd; E=6.3e-108 PF02376; CUT domain; E=0.32; 3-isopropylmalate dehydrogenase 1946949..1948043 Rhodopirellula baltica SH 1 1791392 NP_865712.1 CDS RB3768 NC_005027.1 1948093 1949406 D PMID: 10762278 PMID: 7704254 best DB hits: BLAST: swissprot:P42237; GUDP_BACSU PROBABLE GLUCARATE TRANSPORTER; E=2e-33 swissprot:Q46916; GUDP_ECOLI PROBABLE GLUCARATE TRANSPORTER; E=2e-33 gb:AAG57903.1; AE005507_4 (AE005507) transport protein; E=4e-33 COG: BS_ycbE; COG0477 Permeases of the major facilitator superfamily; E=2e-34 PA1569; COG2271 Sugar phosphate permease; E=7e-12 AF0907; COG0477 Permeases of the major facilitator superfamily; E=1e-11; glucarate transporter 1948093..1949406 Rhodopirellula baltica SH 1 1796927 NP_865713.1 CDS RB3770 NC_005027.1 1949403 1950452 D PMID: 10484179 best DB hits: BLAST: ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=3e-19 swissprot:O05389; YRBE_BACSU HYPOTHETICAL 37.8 KDA PROTEIN IN; E=2e-17 pir:G72391; conserved hypothetical protein - Thermotoga maritima; E=9e-15 COG: BH1248; COG0673 Predicted dehydrogenases and related proteins; E=3e-20 PFAM: PF01408; Oxidoreductase, NAD-bi; E=1.5e-26; NADH-dependent dyhydrogenase 1949403..1950452 Rhodopirellula baltica SH 1 1797045 NP_865714.1 CDS RB3771 NC_005027.1 1950428 1951096 D PMID: 9371463 best DB hits: BLAST: pir:B69206; conserved hypothetical protein MTH796 - Methanobacterium; E=1e-16 pir:S75497; hypothetical protein slr2121 - Synechocystis sp. (strain; E=6e-16 pir:D75064; hypothetical protein PAB0997 - Pyrococcus abyssi (strain; E=3e-12 COG: MTH796; COG1878 Uncharacterized ACR, predicted metal-dependent; E=1e-17; hypothetical protein 1950428..1951096 Rhodopirellula baltica SH 1 1790904 NP_865715.1 CDS RB3772 NC_005027.1 1951003 1951371 D hypothetical protein 1951003..1951371 Rhodopirellula baltica SH 1 1792518 NP_865716.1 CDS RB3773 NC_005027.1 1951368 1952768 D PMID: 8905231 best DB hits: BLAST: pir:S75596; hypothetical protein slr1342 - Synechocystis sp. (strain; E=2e-54 gb:AAF25989.1; AC013354_8 (AC013354) F15H18.21 [Arabidopsis; E=4e-54 gb:AAF78379.1; AC069551_12 (AC069551) T10O22.24 [Arabidopsis; E=1e-52 COG: slr1342; COG3395 Uncharacterized protein; E=2e-55; hypothetical protein 1951368..1952768 Rhodopirellula baltica SH 1 1796583 NP_865717.1 CDS RB3774 NC_005027.1 1952792 1953208 D PMID: 10484179 best DB hits: BLAST: swissprot:P54540; YQJC_BACSU HYPOTHETICAL 15.7 KD PROTEIN IN; E=1e-15 ddbj:BAB05187.1; (AP001512) BH1468~unknown conserved protein; E=4e-15 pir:A71452; glyoxalase I related protein PH0272 [similarity] -; E=2e-13 COG: BS_yqjC; COG0346 Lactoylglutathione lyase; E=9e-17 PFAM: PF00903; Glyoxalase/Bleomycin resistance pr; E=3.7e-09; hypothetical protein 1952792..1953208 Rhodopirellula baltica SH 1 1796046 NP_865718.1 CDS RB3775 NC_005027.1 1953217 1953744 D hypothetical protein 1953217..1953744 Rhodopirellula baltica SH 1 1792089 NP_865719.1 CDS RB3777 NC_005027.1 1953826 1954701 D signal peptide 1953826..1954701 Rhodopirellula baltica SH 1 1795896 NP_865720.1 CDS RB3779 NC_005027.1 1954717 1957809 R PMID: 10564511 best DB hits: BLAST: gb:AAD47812.1; (AF163841) histidine protein kinase; E=7e-40 pir:D82244; sensory box sensor histidine kinase VC1084 [imported] -; E=2e-38 pir:F83324; probable two-component sensor PA2571 [imported] -; E=2e-35 COG: VC1084; COG0642 Sensory transduction histidine kinases; E=2e-39 slr1759_2; COG2202 PAS/PAC domain; E=1e-18 BS_ykrQ_3; COG0642 Sensory transduction histidine kinases; E=1e-18 PFAM: PF00989; PAS domain; E=0.0067 PF00785; PAC motif; E=3.7e-09 PF00989; PAS domain; E=0.17; histidine protein kinase complement(1954717..1957809) Rhodopirellula baltica SH 1 1792610 NP_865721.1 CDS RB3783 NC_005027.1 1957694 1957876 R hypothetical protein complement(1957694..1957876) Rhodopirellula baltica SH 1 1797128 NP_865722.1 CDS RB3784 NC_005027.1 1957869 1958324 R PMID: 10952301 best DB hits: BLAST: pir:F82244; response regulator VC1086 [imported] - Vibrio cholerae; E=2e-13 ddbj:BAA14000.1; (D89625) adenylate cyclase [Anabaena sp.]; E=1e-12 pir:G82244; response regulator VC1087 [imported] - Vibrio cholerae; E=1e-11 COG: VC1087_1; COG0784 CheY-like receiver domains; E=1e-12 PA2881; COG2204 AAA superfamily ATPases with N-terminal receiver; E=2e-10 Rv0981; COG0745 Response regulators consisting of a CheY-like; E=5e-09 PFAM: PF00072; Response regulator receiver doma; E=5.1e-17; response regulator complement(1957869..1958324) Rhodopirellula baltica SH 1 1791057 NP_865723.1 CDS RB3786 NC_005027.1 1958691 1961354 R hypothetical protein complement(1958691..1961354) Rhodopirellula baltica SH 1 1795537 NP_865724.1 CDS RB3788 NC_005027.1 1961326 1962402 R PMID: 9767592 PMID: 10567266 best DB hits: BLAST: swissprot:P22040; Y415_SYNY3 HYPOTHETICAL ABC TRANSPORTER; E=3e-49 gb:AAC36155.1; (AF003632) PilH [Myxococcus xanthus]; E=2e-47 pir:H75288; ABC transporter ATP-binding protein - Deinococcus; E=5e-47 COG: sll0415; COG1131 ABC-type multidrug transport system, ATPase; E=2e-50 BH1054_2; COG0842 Permease component of an ABC-transporter; E=1e-33 PH0820; COG1131 ABC-type multidrug transport system, ATPase; E=3e-33 PFAM: PF02223; Thymidylate kinase; E=0.7 PF00005; ABC transporter; E=1.1e-46; ABC transporter ATP-binding protein complement(1961326..1962402) Rhodopirellula baltica SH 1 1791812 NP_865725.1 CDS RB3789 NC_005027.1 1962399 1962878 R hypothetical protein complement(1962399..1962878) Rhodopirellula baltica SH 1 1793827 NP_865726.1 CDS RB3790 NC_005027.1 1962900 1963154 D hypothetical protein 1962900..1963154 Rhodopirellula baltica SH 1 1794340 NP_865727.1 CDS RB3792 NC_005027.1 1963269 1964405 D PMID: 11157922 PMID: 10360571 best DB hits: BLAST: pir:C72228; sensor histidine kinase HpkA - Thermotoga maritima; E=1e-16 swissprot:P23545; PHOR_BACSU ALKALINE PHOSPHATASE SYNTHESIS SENSOR; E=2e-16 gb:AAF70313.1; AF260326_2 (AF260326) SrrB [Staphylococcus aureus]; E=3e-16 COG: TM1654_2; COG0642 Sensory transduction histidine kinases; E=1e-17 PFAM: PF00512; His Kinase A (phosphoacceptor) doma; E=1.8e-16 PF02518; Histidine kinase-, DNA gyrase B-, p; E=2e-27; sensor histidine kinase 1963269..1964405 Rhodopirellula baltica SH 1 1791945 NP_865728.1 CDS RB3794 NC_005027.1 1964622 1968860 D PMID: 9252185 best DB hits: BLAST: pir:B64528; conserved hypothetical ATP-binding protein HP0066 -; E=2e-31 pir:A71979; hypothetical protein jhp0061 - Helicobacter pylori (strain; E=6e-31 ddbj:BAA33499.1; (AB003309) cdrA [Helicobacter pylori]; E=9e-29 COG: HP0066; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related; E=2e-32 PFAM: PF00005; ABC transporter; E=0.0065 PF00004; ATPase associated with; E=0.24 PF01580; FtsK/SpoIIIE family; E=9.4e-24; ATP-binding protein 1964622..1968860 Rhodopirellula baltica SH 1 1797078 NP_865729.1 CDS RB3800 NC_005027.1 1968891 1969253 D hypothetical protein 1968891..1969253 Rhodopirellula baltica SH 1 1794570 NP_865730.1 CDS RB3802 NC_005027.1 1969262 1969456 R hypothetical protein complement(1969262..1969456) Rhodopirellula baltica SH 1 1794956 NP_865731.1 CDS RB3804 NC_005027.1 1969437 1973225 D signal peptide 1969437..1973225 Rhodopirellula baltica SH 1 1792860 NP_865732.1 CDS RB3808 NC_005027.1 1973057 1974532 D hypothetical protein 1973057..1974532 Rhodopirellula baltica SH 1 1790686 NP_865733.1 CDS RB3809 NC_005027.1 1974492 1974647 R hypothetical protein complement(1974492..1974647) Rhodopirellula baltica SH 1 1795436 NP_865734.1 CDS RB3810 NC_005027.1 1974664 1975230 R hypothetical protein complement(1974664..1975230) Rhodopirellula baltica SH 1 1790585 NP_865735.1 CDS RB3813 NC_005027.1 1975188 1975415 D hypothetical protein 1975188..1975415 Rhodopirellula baltica SH 1 1794024 NP_865736.1 CDS RB3814 NC_005027.1 1975337 1975558 D hypothetical protein 1975337..1975558 Rhodopirellula baltica SH 1 1791858 NP_865737.1 CDS RB3815 NC_005027.1 1975685 1976740 D PMID: 8843436 best DB hits: BLAST: embl:CAB58305.1; (AL121854) hypothetical protein SCJ33.06c; E=1e-07 gb:AAF87158.1; AC002423_23 (AC002423) T23E23.6 [Arabidopsis; E=7e-05 gb:AAF87138.1; AC002423_3 (AC002423) T23E23.5 [Arabidopsis; E=5e-04 PFAM: PF01436; NHL repeat; E=0.094; hypothetical protein 1975685..1976740 Rhodopirellula baltica SH 1 1795482 NP_865738.1 CDS RB3816 NC_005027.1 1976747 1977658 D PMID: 2647728 best DB hits: BLAST: pir:T08967; hypothetical protein F19B15.150 - Arabidopsis thaliana; E=3e-78 swissprot:O34948; YKWC_BACSU HYPOTHETICAL 30.7 KD PROTEIN IN; E=8e-71 gb:AAK06313.1; AE006450_6 (AE006450) 3-hydroxyisobutyrate; E=6e-70 COG: BS_ykwC; COG2084 3-hydroxyisobutyrate dehydrogenase and related; E=7e-72; 3-hydroxyisobutyrate dehydrogenase 1976747..1977658 Rhodopirellula baltica SH 1 1795884 NP_865739.1 CDS RB3817 NC_005027.1 1977722 1979134 R PMID: 10352233 PMID: 8636017 best DB hits: BLAST: pir:A83203; alginate o-acetyltransferase AlgI PA3548 [imported] -; E=3e-71 gb:AAB09781.1; (U50202) AlgI [Pseudomonas aeruginosa]; E=1e-70 gb:AAC04568.1; (AF027499) AlgI [Azotobacter vinelandii]; E=3e-69 COG: PA3548; COG1696 Predicted membrane protein involved in D-alanine; E=3e-72; alginate o-acetyltransferase algI complement(1977722..1979134) Rhodopirellula baltica SH 1 1796004 NP_865740.1 CDS RB3818 NC_005027.1 1979131 1980195 R signal peptide complement(1979131..1980195) Rhodopirellula baltica SH 1 1796155 NP_865741.1 CDS pss NC_005027.1 1980192 1981181 R PMID: 2830250 best DB hits: BLAST: pir:F71678; CDPdiacylglycerol--serine O-phosphatidyltransferase (EC; E=1e-12 pir:G82804; phosphatidyltransferase XF0442 [imported] - Xylella; E=2e-12 pir:T47268; phosphatidylserine synthase [imported] - Helicobacter; E=3e-12 COG: RP242; COG1183 Phosphatidylserine synthase; E=1e-13 Rv2612c; COG0558 Phosphatidylglycerophosphate synthase; E=1e-05 AF2044; COG1183 Phosphatidylserine synthase; E=1e-05 PFAM: PF01066; CDP-alcohol phosphatidyltrans; E=1.1e-08; CDP-diacylglycerol--serine O-phosphatidyltransferase complement(1980192..1981181) Rhodopirellula baltica SH 1 1796992 NP_865742.2 CDS psd NC_005027.1 1981139 1981891 R catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase complement(1981139..1981891) Rhodopirellula baltica SH 1 1791922 NP_865743.1 CDS nadB NC_005027.1 1982259 1983941 D PMID: 2187483 best DB hits: BLAST: pir:T51421; L-aspartate oxidase-like protein - Arabidopsis thaliana; E=3e-91 pir:T36393; L-aspartate oxidase - Streptomyces coelicolor -----; E=5e-90 swissprot:Q51363; NADB_PSEAE L-ASPARTATE OXIDASE (QUINOLINATE; E=2e-86 COG: PA0761; COG0029 Aspartate oxidase; E=1e-87 Rv1552; COG1053 Succinate dehydrogenase/fumarate reductase,; E=4e-69 XF1924; COG0029 Aspartate oxidase; E=1e-68 PFAM: PF01134; Glucose inhibited division pro; E=0.2 PF01494; FAD binding domain; E=0.011 PF00732; GMC oxidoreductases; E=0.12; L-aspartate oxidase 1982259..1983941 Rhodopirellula baltica SH 1 1793352 NP_865744.1 CDS oprP NC_005027.1 1984011 1985525 R PMID: 1697017 PMID: 3017428 best DB hits: BLAST: swissprot:P05695; PORP_PSEAE PORIN P PRECURSOR (OUTER MEMBRANE; E=4e-16 pir:S11793; porin P precursor, phosphate-specific - Pseudomonas; E=5e-16 pir:D82740; polyphosphate-selective porin O XF0975 [imported] -; E=1e-11; porin complement(1984011..1985525) Rhodopirellula baltica SH 1 1790432 NP_865745.1 CDS RB3828 NC_005027.1 1985536 1987938 D hypothetical protein 1985536..1987938 Rhodopirellula baltica SH 1 1795995 NP_865746.1 CDS RB3830 NC_005027.1 1987949 1988593 D PMID: 10780382 best DB hits: BLAST: ddbj:BAB16192.1; (AP002086) hypothetical protein [Agrobacterium; E=8e-23 embl:CAC14575.1; (AJ295059) arylesterase [Sinorhizobium; E=2e-20 gb:AAD02335.1; (AF044683) arylesterase [Agrobacterium; E=3e-18; hypothetical protein 1987949..1988593 Rhodopirellula baltica SH 1 1796371 NP_865747.1 CDS RB3831 NC_005027.1 1988666 1988788 R hypothetical protein complement(1988666..1988788) Rhodopirellula baltica SH 1 1790273 NP_865748.1 CDS RB3832 NC_005027.1 1988949 1989125 R hypothetical protein complement(1988949..1989125) Rhodopirellula baltica SH 1 1791545 NP_865749.1 CDS RB3833 NC_005027.1 1989195 1989662 D hypothetical protein 1989195..1989662 Rhodopirellula baltica SH 1 1792019 NP_865750.1 CDS RB3835 NC_005027.1 1989687 1989839 D hypothetical protein 1989687..1989839 Rhodopirellula baltica SH 1 1794639 NP_865751.1 CDS RB3836 NC_005027.1 1989848 1990474 D signal peptide 1989848..1990474 Rhodopirellula baltica SH 1 1790926 NP_865752.1 CDS RB3838 NC_005027.1 1990530 1990835 D signal peptide 1990530..1990835 Rhodopirellula baltica SH 1 1796772 NP_865753.1 CDS RB3840 NC_005027.1 1990986 1991492 D PMID: 9168618 best DB hits: PFAM: PF00903; Glyoxalase/Bleomycin resistance pr; E=5.3e-10; dioxygenase superfamily protein 1990986..1991492 Rhodopirellula baltica SH 1 1791331 NP_865754.1 CDS RB3841 NC_005027.1 1991467 1991607 D hypothetical protein 1991467..1991607 Rhodopirellula baltica SH 1 1794041 NP_865755.1 CDS RB3842 NC_005027.1 1991615 1993741 R PMID: 9524216 PMID: 95147689 best DB hits: BLAST: gb:AAC46184.1; (AF026511) dipeptidyl peptidase IV [Porphyromonas; E=2e-59 ddbj:BAA28265.1; (AB008194) DPP IV [Porphyromonas gingivalis]; E=5e-59 pir:S66261; X-Pro dipeptidyl-peptidase (EC 3.4.14.11) -; E=5e-48 COG: YHR028c; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; E=8e-26 PFAM: PF00930; Dipeptidyl peptidase IV (DPP IV); E=7.9e-29 PF00326; Prolyl oligopeptidase; E=0.39; dipeptidyl peptidase IV complement(1991615..1993741) Rhodopirellula baltica SH 1 1791639 NP_865756.1 CDS RB3845 NC_005027.1 1993863 1993979 D hypothetical protein 1993863..1993979 Rhodopirellula baltica SH 1 1795851 NP_865757.1 CDS RB3846 NC_005027.1 1994029 1994148 D hypothetical protein 1994029..1994148 Rhodopirellula baltica SH 1 1792984 NP_865758.1 CDS RB3847 NC_005027.1 1994141 1994263 R hypothetical protein complement(1994141..1994263) Rhodopirellula baltica SH 1 1790204 NP_865759.1 CDS RB3848 NC_005027.1 1994257 1994538 R hypothetical protein complement(1994257..1994538) Rhodopirellula baltica SH 1 1796128 NP_865760.1 CDS RB3849 NC_005027.1 1994427 1996340 D PMID: 10336424 best DB hits: BLAST: pir:E64903; arylsulfatase homolog b1498 - Escherichia coli -----; E=1e-26 swissprot:P77318; YDEN_ECOLI SULFATASE YDEN PRECURSOR; E=1e-26 gb:AAF30402.1; AF109924_1 (AF109924) sulfatase 1 precursor [Helix; E=1e-26 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=1e-27 PFAM: PF00884; Sulfatase; E=1.2e-31; Aryl-sulphate sulphohydrolase 1994427..1996340 Rhodopirellula baltica SH 1 1791139 NP_865761.1 CDS RB3851 NC_005027.1 1996433 1996660 R hypothetical protein complement(1996433..1996660) Rhodopirellula baltica SH 1 1789993 NP_865762.1 CDS RB3854 NC_005027.1 1996680 1997117 D PMID: 10952301 best DB hits: BLAST: pir:D82278; hypothetical protein VC0802 [imported] - Vibrio cholerae; E=2e-24 pir:C83100; hypothetical protein PA4364 [imported] - Pseudomonas; E=3e-15; hypothetical protein 1996680..1997117 Rhodopirellula baltica SH 1 1791341 NP_865763.1 CDS RB3856 NC_005027.1 1997265 1997840 D hypothetical protein 1997265..1997840 Rhodopirellula baltica SH 1 1794009 NP_865764.1 CDS RB3858 NC_005027.1 1997834 1998016 R hypothetical protein complement(1997834..1998016) Rhodopirellula baltica SH 1 1790259 NP_865765.1 CDS RB3860 NC_005027.1 1998008 1998445 D hypothetical protein 1998008..1998445 Rhodopirellula baltica SH 1 1796630 NP_865766.1 CDS RB3864 NC_005027.1 1998657 1999049 D hypothetical protein 1998657..1999049 Rhodopirellula baltica SH 1 1796181 NP_865767.1 CDS RB3865 NC_005027.1 1999065 1999601 D PMID: 10567266 best DB hits: BLAST: ddbj:BAB04222.1; (AP001508) BH0503~unknown conserved protein in; E=1e-17 pir:G75479; hypothetical protein - Deinococcus radiodurans (strain; E=1e-15 pir:E82435; hypothetical protein VCA0631 [imported] - Vibrio; E=1e-11 COG: BH0503; COG0454 Histone acetyltransferase HPA2 and related; E=1e-18 PFAM: PF00583; Acetyltransferase (GNAT) family; E=3.9e-07; acetyltransferase 1999065..1999601 Rhodopirellula baltica SH 1 1791919 NP_865768.1 CDS RB3866 NC_005027.1 1999696 2000493 R hypothetical protein complement(1999696..2000493) Rhodopirellula baltica SH 1 1793776 NP_865769.1 CDS RB3867 NC_005027.1 2000435 2001289 D best DB hits: BLAST: pir:F75494; hypothetical protein - Deinococcus radiodurans (strain; E=0.55 PFAM: PF01260; AP endonuclease 1; E=0.41; signal peptide 2000435..2001289 Rhodopirellula baltica SH 1 1791572 NP_865770.1 CDS RB3868 NC_005027.1 2001286 2001663 R hypothetical protein complement(2001286..2001663) Rhodopirellula baltica SH 1 1790772 NP_865771.1 CDS RB3870 NC_005027.1 2001345 2001644 R hypothetical protein complement(2001345..2001644) Rhodopirellula baltica SH 1 1791666 NP_865772.1 CDS RB3871 NC_005027.1 2001638 2002954 D PMID: 10762236 best DB hits: BLAST: gb:AAD38020.1; AF148127_1 (AF148127) transposase [Porphyromonas; E=8e-13 ddbj:BAA83477.1; (AB009361) transposase [Porphyromonas; E=1e-12 ddbj:BAA92234.1; (AB031551) transposase [Bacillus subtilis]; E=3e-10 COG: BH0691; COG3385 Predicted transposase; E=2e-10 PFAM: PF01609; Transposase (IS4 family); E=6.2e-08; transposase 2001638..2002954 Rhodopirellula baltica SH 1 1793386 NP_865773.1 CDS RB3873 NC_005027.1 2002995 2003252 D hypothetical protein 2002995..2003252 Rhodopirellula baltica SH 1 1793684 NP_865774.1 CDS arsA NC_005027.1 2003332 2004822 D PMID: 7910580 PMID: 1572648 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=3e-38 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=3e-35 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=3e-35 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=8e-29 PFAM: PF00884; Sulfatase; E=3.2e-49; arylsulfatase 2003332..2004822 Rhodopirellula baltica SH 1 1797062 NP_865775.1 CDS aslA NC_005027.1 2004910 2006460 R PMID: 2476654 PMID: 2303452 PMID: 89384447 best DB hits: BLAST: gb:AAF04318.1; (AF065159) arylsulfatase [Bradyrhizobium; E=2e-50 gb:AAG58993.1; AE005611_3 (AE005611) arylsulfatase [Escherichia; E=4e-32 swissprot:P25549; ASLA_ECOLI ARYLSULFATASE (ARYL-SULFATE; E=6e-32 COG: aslA; COG3119 Arylsulfatase A and related enzymes; E=5e-33 PFAM: PF00884; Sulfatase; E=6.1e-68; Aryl-sulfate sulphohydrolase complement(2004910..2006460) Rhodopirellula baltica SH 1 1795005 NP_865776.1 CDS RB3880 NC_005027.1 2006705 2006953 R hypothetical protein complement(2006705..2006953) Rhodopirellula baltica SH 1 1790455 NP_865777.1 CDS RB3881 NC_005027.1 2007036 2007194 R hypothetical protein complement(2007036..2007194) Rhodopirellula baltica SH 1 1794589 NP_865778.1 CDS RB3882 NC_005027.1 2007217 2007369 R hypothetical protein complement(2007217..2007369) Rhodopirellula baltica SH 1 1795516 NP_865779.1 CDS RB3883 NC_005027.1 2007344 2007682 R hypothetical protein complement(2007344..2007682) Rhodopirellula baltica SH 1 1791647 NP_865780.1 CDS pyrH NC_005027.1 2007712 2008764 D PMID: 10607910 best DB hits: BLAST: ddbj:BAB01794.1; (AB026654) contains similarity to uridylate; E=9e-63 swissprot:P74457; PYRH_SYNY3 URIDYLATE KINASE (UK) (URIDINE; E=2e-61 swissprot:O66929; PYRH_AQUAE URIDYLATE KINASE (UK) (URIDINE; E=7e-61 COG: sll0144; COG0528 Uridylate kinase; E=2e-62 PFAM: PF00696; Amino acid kinase; E=1.1e-50; uridylate kinase 2007712..2008764 Rhodopirellula baltica SH 1 1797104 NP_865781.1 CDS FRR NC_005027.1 2008765 2009367 D PMID: 8183897 PMID: 8755892 best DB hits: BLAST: ddbj:BAB06143.1; (AP001515) ribosome recycling factor [Bacillus; E=1e-37 swissprot:P81101; RRF_BACSU RIBOSOME RECYCLING FACTOR (RIBOSOME; E=5e-36 swissprot:Q10794; RRF_MYCTU RIBOSOME RECYCLING FACTOR (RIBOSOME; E=5e-35 COG: BH2424; COG0233 Ribosome recycling factor; E=1e-38 PFAM: PF01765; Ribosome recycling factor; E=2.5e-74; ribosome recycling factor 2008765..2009367 Rhodopirellula baltica SH 1 1796647 NP_865782.1 CDS RB3888 NC_005027.1 2009374 2011059 D hypothetical protein 2009374..2011059 Rhodopirellula baltica SH 1 1790377 NP_865783.1 CDS RB3890 NC_005027.1 2011177 2011554 R hypothetical protein complement(2011177..2011554) Rhodopirellula baltica SH 1 1792805 NP_865784.1 CDS proC NC_005027.1 2011605 2012435 R PMID: 6296787 best DB hits: BLAST: swissprot:Q04708; PROC_PEA PYRROLINE-5-CARBOXYLATE REDUCTASE; E=4e-49 swissprot:P54904; PROC_ARATH PYRROLINE-5-CARBOXYLATE REDUCTASE; E=4e-49 swissprot:P17817; PROC_SOYBN PYRROLINE-5-CARBOXYLATE REDUCTASE; E=8e-48 COG: slr0661; COG0345 Pyrroline-5-carboxylate reductase; E=3e-45 PFAM: PF01089; Delta 1-pyrroline-5-carboxylate redu; E=6.5e-101; pyrroline-5-carboxylate reductase complement(2011605..2012435) Rhodopirellula baltica SH 1 1792415 NP_865785.1 CDS RB3893 NC_005027.1 2012479 2013987 R PMID: 11337471 best DB hits: BLAST: pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=1e-22 gb:AAK05985.1; AE006418_5 (AE006418) serinethreonine protein; E=1e-22 embl:CAA10713.1; (AJ132604) hypothetical protein [Lactococcus; E=2e-22 COG: BH2504_1; COG0515 Serine/threonine protein kinases; E=1e-21 PFAM: PF00069; Protein kinase domain; E=3.4e-39; serine/threonine protein kinase complement(2012479..2013987) Rhodopirellula baltica SH 1 1797060 NP_865786.1 CDS inlE NC_005027.1 2013984 2015186 R PMID: 9125538 PMID: 1905979 best DB hits: BLAST: gb:AAB67969.1; (U77368) internalin [Listeria monocytogenes]; E=1e-28 embl:CAA07457.1; (AJ007319) internalin H [Listeria monocytogenes]; E=1e-28 embl:CAC20635.1; (AJ012385) internalin D [Listeria monocytogenes]; E=1e-28 PFAM: PF00560; Leucine Rich Repeat; E=0.24; internalin complement(2013984..2015186) Rhodopirellula baltica SH 1 1793737 NP_865787.1 CDS PCP NC_005027.1 2015236 2015967 R PMID: 7909543 best DB hits: BLAST: swissprot:P42673; PCP_PSEFL PYRROLIDONE-CARBOXYLATE PEPTIDASE; E=3e-18 swissprot:O73944; PCP_PYRFU PYRROLIDONE-CARBOXYLATE PEPTIDASE; E=3e-18 pir:D75057; pyroglutamyl-peptidase I (EC 3.4.19.3) PAB1419; E=3e-17 COG: PAB1419; COG2039 Pyrrolidone-carboxylate peptidase (N-terminal; E=3e-18 PFAM: PF01470; Pyroglutamyl peptidase; E=1.9e-15; pyrrolidone-carboxylate peptidase complement(2015236..2015967) Rhodopirellula baltica SH 1 1796946 NP_865788.1 CDS RB3899 NC_005027.1 2016038 2018047 R signal peptide complement(2016038..2018047) Rhodopirellula baltica SH 1 1789920 NP_865789.1 CDS RB3902 NC_005027.1 2018093 2018329 R hypothetical protein complement(2018093..2018329) Rhodopirellula baltica SH 1 1791705 NP_865790.1 CDS RB3904 NC_005027.1 2018399 2018581 R hypothetical protein complement(2018399..2018581) Rhodopirellula baltica SH 1 1791793 NP_865791.1 CDS RB3905 NC_005027.1 2018601 2018717 D hypothetical protein 2018601..2018717 Rhodopirellula baltica SH 1 1796959 NP_865792.1 CDS RB3906 NC_005027.1 2018695 2019081 D PMID: 8905231 best DB hits: BLAST: pir:S76180; hypothetical protein - Synechocystis sp. (strain PCC; E=1e-41 gb:AAD29263.1; AF107093_8 (AF107093) unknown [Rhodobacter; E=7e-32 pir:B70799; hypothetical protein Rv3745c - Mycobacterium; E=6e-12; hypothetical protein 2018695..2019081 Rhodopirellula baltica SH 1 1791760 NP_865793.1 CDS RB3908 NC_005027.1 2019281 2019730 R PMID: 10567266 best DB hits: BLAST: pir:C75256; conserved hypothetical protein - Deinococcus radiodurans; E=3e-46 gb:AAG48795.1; AF332432_1 (AF332432) unknown protein [Arabidopsis; E=3e-40 pir:A82330; conserved hypothetical protein VC0373 [imported] -; E=4e-38 COG: DR2598; COG0432 Uncharacterized ACR; E=3e-47 PFAM: PF01894; Uncharacterised protein family UPF00; E=5.6e-43; hypothetical protein complement(2019281..2019730) Rhodopirellula baltica SH 1 1790683 NP_865794.1 CDS RB3911 NC_005027.1 2019984 2020625 R hypothetical protein complement(2019984..2020625) Rhodopirellula baltica SH 1 1790283 NP_865795.1 CDS RB3913 NC_005027.1 2020731 2023433 D PMID: 1317840 best DB hits: BLAST: pir:C75313; probable proteinase - Deinococcus radiodurans (strain; E=1e-136 pir:D69102; collagenase - Methanobacterium thermoautotrophicum; E=2e-58 pir:F64895; hypothetical protein b1435 - Escherichia coli -----; E=9e-53 COG: DR2130; COG0826 Protease related to collagenase; E=1e-137 PFAM: PF01045; EIAV glycoprotein, gp45; E=0.52 PF01136; Peptidase U32; E=1.9e-50 PF00452; Apoptosis regulator proteins, B; E=0.0056; collagenase 2020731..2023433 Rhodopirellula baltica SH 1 1796821 NP_865796.1 CDS dpoL NC_005027.1 2023447 2024937 R PMID: 2119891 best DB hits: BLAST: embl:CAB77286.1; (AL160312) DNA polymerase related; E=9e-39 gb:AAD56917.1; AF180145_9 (AF180145) hypothetical protein; E=1e-30 embl:CAB56297.1; (AJ249385) hypothetical protein [Pseudomonas; E=3e-30 COG: aq_1693; COG1573 Uracil-DNA glycosylase; E=5e-21; DNA polymerase related protein complement(2023447..2024937) Rhodopirellula baltica SH 1 1791894 NP_865797.1 CDS RB3916 NC_005027.1 2024956 2026728 R hypothetical protein complement(2024956..2026728) Rhodopirellula baltica SH 1 1791368 NP_865798.1 CDS RB3917 NC_005027.1 2026822 2026956 R hypothetical protein complement(2026822..2026956) Rhodopirellula baltica SH 1 1792332 NP_865799.1 CDS RB3919 NC_005027.1 2026982 2031835 D PMID: 11481431 best DB hits: BLAST: pir:C75617; probable oxidoreductase - Deinococcus radiodurans; E=0.004 pir:F75417; L-sorbosone dehydrogenase - Deinococcus radiodurans; E=0.14 pir:S31940; starch-degrading enzyme - Clostridium acetobutylicum; E=0.67 COG: DRA0203; COG2133 Glucose/sorbosone dehydrogenases; E=4e-04 PFAM: PF00034; Cytochrome c; E=0.049; signal peptide 2026982..2031835 Rhodopirellula baltica SH 1 1796686 NP_865800.1 CDS RB3922 NC_005027.1 2032156 2032302 R signal peptide complement(2032156..2032302) Rhodopirellula baltica SH 1 1797009 NP_865801.1 CDS RB3923 NC_005027.1 2032286 2032453 R hypothetical protein complement(2032286..2032453) Rhodopirellula baltica SH 1 1796344 NP_865802.1 CDS RB3924 NC_005027.1 2032450 2033421 R PMID: 9639930 best DB hits: BLAST: swissprot:P46218; Y31K_SULAC HYPOTHETICAL 31.5 KD PROTEIN -----; E=6e-06 swissprot:O34940; YVRE_BACSU HYPOTHETICAL 33.2 KD PROTEIN IN; E=7e-05 ddbj:BAA13046.1; (D86217) regucalcin [Mus musculus]; E=0.76 COG: BS_yvrE; COG3386 Uncharacterized protein; E=7e-06; hypothetical protein complement(2032450..2033421) Rhodopirellula baltica SH 1 1795949 NP_865803.1 CDS RB3925 NC_005027.1 2033382 2033534 R hypothetical protein complement(2033382..2033534) Rhodopirellula baltica SH 1 1796824 NP_865804.1 CDS RB3926 NC_005027.1 2033554 2033811 R hypothetical protein complement(2033554..2033811) Rhodopirellula baltica SH 1 1793719 NP_865805.1 CDS RB3928 NC_005027.1 2033789 2034310 D hypothetical protein 2033789..2034310 Rhodopirellula baltica SH 1 1791783 NP_865806.1 CDS RB3929 NC_005027.1 2034243 2034407 R hypothetical protein complement(2034243..2034407) Rhodopirellula baltica SH 1 1791600 NP_865807.1 CDS RB3930 NC_005027.1 2034253 2034417 R hypothetical protein complement(2034253..2034417) Rhodopirellula baltica SH 1 1790581 NP_865808.1 CDS tolQ NC_005027.1 2034427 2035200 D PMID: 8331075 PMID: 10348868 PMID: 8921895 best DB hits: BLAST: pir:G83274; probable tolQ-type transport protein PA2983 [imported] -; E=7e-13 pir:H71686; tolQ protein (tolQ) RP309 - Rickettsia prowazekii; E=1e-10 pir:G82187; biopolymer transport protein ExbB-related protein VC1547; E=1e-10 COG: PA2983; COG0811 Biopolymer transport proteins; E=7e-14 PFAM: PF01618; MotA/TolQ/ExbB proton channel famil; E=4e-28; tolQ protein 2034427..2035200 Rhodopirellula baltica SH 1 1794759 NP_865809.1 CDS RB3933 NC_005027.1 2035200 2035637 D PMID: 11743194 best DB hits: BLAST: swissprot:P18784; EXBD_ECOLI BIOPOLYMER TRANSPORT EXBD PROTEIN; E=0.010 swissprot:Q05606; EXBD_PSEPU BIOPOLYMER TRANSPORT EXBD PROTEIN; E=0.35 embl:CAB50919.1; (AJ243354) hypothetical protein [Pseudomonas; E=0.35 COG: exbD; COG0848 Biopolymer transport protein; E=0.001; hypothetical protein 2035200..2035637 Rhodopirellula baltica SH 1 1790550 NP_865810.1 CDS RB3934 NC_005027.1 2035580 2036125 D best DB hits: BLAST: swissprot:Q9ZHV9; EXD2_VIBCH BIOPOLYMER TRANSPORT EXBD2 PROTEIN; E=0.57 PFAM: PF02472; Biopolymer transport protein ExbD/To; E=0.0017; hypothetical protein 2035580..2036125 Rhodopirellula baltica SH 1 1796309 NP_865811.1 CDS RB3935 NC_005027.1 2036074 2036241 R hypothetical protein complement(2036074..2036241) Rhodopirellula baltica SH 1 1796005 NP_865812.1 CDS trpG NC_005027.1 2036289 2037023 D PMID: 2656657 PMID: 6283099 PMID: 2404959 best DB hits: BLAST: pir:B82835; anthranilate synthase component II XF0211 [imported] -; E=4e-40 swissprot:P06193; PABA_SALTY PARA-AMINOBENZOATE SYNTHASE GLUTAMINE; E=4e-39 pir:NNPS2P; anthranilate synthase (EC 4.1.3.27) component II; E=6e-39 COG: XF0211; COG0512 Anthranilate/para-aminobenzoate synthases component; E=3e-41 TM0141_1; COG0512 Anthranilate/para-aminobenzoate synthases; E=7e-37 DR1766; COG0512 Anthranilate/para-aminobenzoate synthases component; E=3e-36 PFAM: PF00117; Glutamine amidotransferase clas; E=0.00015; anthranilate synthase component II 2036289..2037023 Rhodopirellula baltica SH 1 1797120 NP_865813.1 CDS RB3938 NC_005027.1 2037020 2037607 D best DB hits: PFAM: PF01522; Polysaccharide deacetylase; E=0.37; hypothetical protein 2037020..2037607 Rhodopirellula baltica SH 1 1791730 NP_865814.1 CDS RB3940 NC_005027.1 2037604 2038566 D best DB hits: BLAST: gb:AAC27019.1; (AF032114) unknown [Methylobacterium extorquens]; E=2e-16 pir:B75078; hypothetical protein PAB1694 - Pyrococcus abyssi (strain; E=5e-16 pir:F71066; hypothetical protein PH1228 - Pyrococcus horikoshii; E=2e-15 COG: PAB1694; COG1907 Predicted archaeal sugar kinases; E=5e-17; hypothetical protein 2037604..2038566 Rhodopirellula baltica SH 1 1791902 NP_865815.1 CDS spoU NC_005027.1 2038563 2039096 R PMID: 9321663 PMID: 8266080 PMID: 8265370 best DB hits: BLAST: gb:AAB02738.1; (U58864) CspR [Bacillus subtilis]; E=2e-29 swissprot:P32813; YGL3_BACST HYPOTHETICAL 18.2 KD PROTEIN IN GLDA; E=4e-29 pir:G69608; rRNA methylase homolog cspR - Bacillus subtilis -----; E=6e-29 COG: BS_cspR; COG0219 Predicted rRNA methylase (SpoU class); E=5e-30 slr1673; COG0566 rRNA methylases; E=6e-07 PFAM: PF00588; SpoU rRNA Methylase; E=8e-34; SpoU rRNA methylase complement(2038563..2039096) Rhodopirellula baltica SH 1 1791743 NP_865816.1 CDS RB3944 NC_005027.1 2039245 2040786 D best DB hits: BLAST: embl:CAB94634.1; (AL359215) secreted glycosyl hydrolase.; E=9e-10 pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=5e-08 embl:CAB45032.1; (AL078635) large multi-functional; E=0.001; hypothetical protein 2039245..2040786 Rhodopirellula baltica SH 1 1794276 NP_865817.1 CDS RB3946 NC_005027.1 2040830 2042179 D best DB hits: BLAST: pir:G83466; hypothetical protein PA1424 [imported] - Pseudomonas; E=1e-20 pir:C82132; conserved hypothetical protein VC1980 [imported] -; E=3e-18 gb:AAF54040.1; (AE003672) CG10050 gene product [Drosophila; E=3e-12 COG: PA1424; COG3148 Uncharacterized ACR; E=1e-21; hypothetical protein 2040830..2042179 Rhodopirellula baltica SH 1 1796066 NP_865818.1 CDS RB3949 NC_005027.1 2042289 2042528 D hypothetical protein 2042289..2042528 Rhodopirellula baltica SH 1 1793100 NP_865819.1 CDS RB3950 NC_005027.1 2042479 2044623 D PMID: 10831436 best DB hits: BLAST: gb:AAF76874.1; (AF246145) unknown [uncultured soil microbe; E=3e-08; hypothetical protein 2042479..2044623 Rhodopirellula baltica SH 1 1790368 NP_865820.1 CDS RB3951 NC_005027.1 2044634 2046217 R best DB hits: BLAST: pir:T36423; probable large, multifunctional secreted protein -; E=1e-59 embl:CAB45032.1; (AL078635) large multi-functional; E=4e-53; large multi-functional protein complement(2044634..2046217) Rhodopirellula baltica SH 1 1790222 NP_865821.1 CDS RB3953 NC_005027.1 2046211 2048784 R PMID: 9923682 best DB hits: BLAST: pir:B71970; cytochrome oxidase (cbb3-type) - Helicobacter pylori; E=2e-04 pir:C64538; cytochrome-c oxidase (EC 1.9.3.1) chain fixP -; E=0.003 ddbj:BAA33529.1; (AB018105) cb-type cytochrome c oxidase subunit; E=0.009 COG: jhp0135; COG2010 Cytochrome c, mono- and diheme variants; E=2e-05 PFAM: PF00034; Cytochrome c; E=0.00073; cytochrome oxidase (cbb3-type) complement(2046211..2048784) Rhodopirellula baltica SH 1 1796307 NP_865822.1 CDS arsA NC_005027.1 2048754 2050223 R PMID: 2303452 best DB hits: BLAST: pir:F70837; probable sulfatase (EC 3.1.6.-) atsG - Mycobacterium; E=8e-35 gb:AAF55607.1; (AE003724) CG14291 gene product [Drosophila; E=9e-27 prf:2204388A; sulphamidase [Homo sapiens]; E=3e-25 COG: Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=8e-36 PA0924; COG3083 Predicted hydrolase of alkaline phosphatase; E=3e-05 Rv0711; COG3119 Arylsulfatase A and related enzymes; E=5e-04 PFAM: PF00884; Sulfatase; E=2.8e-22; arylsulfatase complement(2048754..2050223) Rhodopirellula baltica SH 1 1791590 NP_865823.1 CDS RB3958 NC_005027.1 2050260 2050421 D hypothetical protein 2050260..2050421 Rhodopirellula baltica SH 1 1790747 NP_865824.1 CDS RB3959 NC_005027.1 2050392 2050802 R PMID: 10567266 best DB hits: BLAST: pir:E75594; conserved hypothetical protein - Deinococcus radiodurans; E=7e-11 pir:B83042; hypothetical protein PA4830 [imported] - Pseudomonas; E=6e-08 ddbj:BAB06321.1; (AP001516) BH2602~unknown conserved protein in; E=7e-07 COG: DRA0017; COG2050 Uncharacterized protein PaaI, possibly involved in; E=7e-12 PFAM: PF02584; Uncharacterized protein PaaI, COG205; E=1.4e-12; hypothetical protein complement(2050392..2050802) Rhodopirellula baltica SH 1 1793454 NP_865825.1 CDS RB3960 NC_005027.1 2050885 2052723 R PMID: 7690140 PMID: 7816544 best DB hits: BLAST: ddbj:BAB07103.1; (AP001518) sodiumsulfate symporter [Bacillus; E=5e-86 swissprot:Q39593; SAC1_CHLRE SULFUR DEPRIVATION RESPONSE; E=1e-75 gb:AAG20642.1; (AE005133) arsenite transport protein; ArsB; E=4e-62 COG: BH3384; COG0471 Di- and tricarboxylate transporters; E=5e-87 PAB1107; COG1055 Na+/H+ antiporter NhaD and related arsenite; E=4e-06 jhp0200; COG0471 Di- and tricarboxylate transporters; E=9e-05 PFAM: PF02080; Potassium channel; E=4.1e-08; sodium/sulfate symporter complement(2050885..2052723) Rhodopirellula baltica SH 1 1794688 NP_865826.1 CDS RB3963 NC_005027.1 2052742 2052870 D hypothetical protein 2052742..2052870 Rhodopirellula baltica SH 1 1792090 NP_865827.1 CDS RB3964 NC_005027.1 2052859 2052984 R hypothetical protein complement(2052859..2052984) Rhodopirellula baltica SH 1 1791407 NP_865828.1 CDS RB3966 NC_005027.1 2052983 2053240 D hypothetical protein 2052983..2053240 Rhodopirellula baltica SH 1 1793907 NP_865829.1 CDS RB3967 NC_005027.1 2053237 2054871 D PMID: 8031825 best DB hits: BLAST: gb:AAG20007.1; (AE005081) pantothenate permease; PanF; E=2e-20 pir:C69115; sodiumproline symporter (proline permease) -; E=3e-11 pir:B69833; metabolite permease homolog yhjB - Bacillus subtilis; E=7e-11 COG: VNG1785G; COG0591 Na+/proline, Na+/panthothenate symporters and; E=2e-21 panF; COG0591 Na+/proline, Na+/panthothenate symporters and related; E=3e-04 NMB0402; COG0591 Na+/proline, Na+/panthothenate symporters and; E=7e-04 PFAM: PF00474; Sodium:solute symporter family; E=0.11; sodium/proline symporter (proline permease) 2053237..2054871 Rhodopirellula baltica SH 1 1793610 NP_865830.1 CDS RB3970 NC_005027.1 2054874 2055122 R hypothetical protein complement(2054874..2055122) Rhodopirellula baltica SH 1 1794565 NP_865831.1 CDS RB3971 NC_005027.1 2055123 2056121 D signal peptide 2055123..2056121 Rhodopirellula baltica SH 1 1790297 NP_865832.1 CDS RB3972 NC_005027.1 2056175 2056288 D hypothetical protein 2056175..2056288 Rhodopirellula baltica SH 1 1793887 NP_865833.1 CDS RB3973 NC_005027.1 2056253 2056375 R hypothetical protein complement(2056253..2056375) Rhodopirellula baltica SH 1 1794221 NP_865834.1 CDS RB3974 NC_005027.1 2056416 2056565 D hypothetical protein 2056416..2056565 Rhodopirellula baltica SH 1 1791911 NP_865835.1 CDS RB3975 NC_005027.1 2056726 2057340 D hypothetical protein 2056726..2057340 Rhodopirellula baltica SH 1 1795304 NP_865836.1 CDS RB3979 NC_005027.1 2057337 2057897 D signal peptide 2057337..2057897 Rhodopirellula baltica SH 1 1792463 NP_865837.1 CDS RB3981 NC_005027.1 2058000 2058485 D hypothetical protein 2058000..2058485 Rhodopirellula baltica SH 1 1791247 NP_865838.1 CDS RB3982 NC_005027.1 2058614 2058874 D PMID: 9163424 best DB hits: BLAST: swissprot:P55482; Y4HR_RHISN HYPOTHETICAL 8.8 KD PROTEIN Y4HR; E=4e-15; hypothetical protein 2058614..2058874 Rhodopirellula baltica SH 1 1791187 NP_865839.1 CDS RB3983 NC_005027.1 2058909 2059145 R hypothetical protein complement(2058909..2059145) Rhodopirellula baltica SH 1 1793147 NP_865840.1 CDS RB3985 NC_005027.1 2059197 2059634 D hypothetical protein 2059197..2059634 Rhodopirellula baltica SH 1 1794464 NP_865841.1 CDS RB3988 NC_005027.1 2059740 2060306 D signal peptide 2059740..2060306 Rhodopirellula baltica SH 1 1793757 NP_865842.1 CDS RB3989 NC_005027.1 2060382 2060714 D hypothetical protein 2060382..2060714 Rhodopirellula baltica SH 1 1792324 NP_865843.1 CDS RB3990 NC_005027.1 2060721 2060888 D hypothetical protein 2060721..2060888 Rhodopirellula baltica SH 1 1790921 NP_865844.1 CDS RB3991 NC_005027.1 2060864 2061145 R hypothetical protein complement(2060864..2061145) Rhodopirellula baltica SH 1 1795555 NP_865845.1 CDS RB3992 NC_005027.1 2060926 2061081 D hypothetical protein 2060926..2061081 Rhodopirellula baltica SH 1 1791050 NP_865846.1 CDS RB3993 NC_005027.1 2061165 2061287 D hypothetical protein 2061165..2061287 Rhodopirellula baltica SH 1 1790055 NP_865847.1 CDS RB3994 NC_005027.1 2061291 2061866 D hypothetical protein 2061291..2061866 Rhodopirellula baltica SH 1 1790983 NP_865848.1 CDS RB3995 NC_005027.1 2061980 2062264 R hypothetical protein complement(2061980..2062264) Rhodopirellula baltica SH 1 1797117 NP_865849.1 CDS RB3997 NC_005027.1 2062268 2063416 R PMID: 1646375 best DB hits: BLAST: prf:2115270C; transposase [Weeksella zoohelcum]; E=1e-33 swissprot:P55631; Y4QJ_RHISN TRANSPOSASE Y4QJ -----; E=1e-31 swissprot:P24607; T801_PSESH TRANSPOSASE FOR INSERTION SEQUENCE; E=4e-10; transposase complement(2062268..2063416) Rhodopirellula baltica SH 1 1794022 NP_865850.1 CDS RB3999 NC_005027.1 2063431 2064741 R PMID: 8195081 PMID: 2821509 best DB hits: BLAST: swissprot:P55632; Y4QK_RHISN INTEGRASERECOMBINASE Y4QK; E=4e-39 swissprot:P55429; Y4EF_RHISN INTEGRASERECOMBINASE Y4EF; E=2e-32 prf:2115270D; integrase [Weeksella zoohelcum]; E=7e-23 COG: PAB0255; COG0582 Integrase; E=1e-20 PFAM: PF02899; Phage integrase, N-terminal S; E=0.3 PF00589; Phage integrase; E=8e-31; integrase complement(2063431..2064741) Rhodopirellula baltica SH 1 1790296 NP_865851.1 CDS RB4000 NC_005027.1 2064633 2065058 D hypothetical protein 2064633..2065058 Rhodopirellula baltica SH 1 1793295 NP_865852.1 CDS RB4001 NC_005027.1 2065146 2065298 D hypothetical protein 2065146..2065298 Rhodopirellula baltica SH 1 1794568 NP_865853.1 CDS RB4002 NC_005027.1 2065341 2066792 D best DB hits: BLAST: embl:CAA97268.1; (Z73025) ORF YGR240c [Saccharomyces cerevisiae]; E=0.83; hypothetical protein 2065341..2066792 Rhodopirellula baltica SH 1 1795950 NP_865854.1 CDS RB4005 NC_005027.1 2066862 2067080 R hypothetical protein complement(2066862..2067080) Rhodopirellula baltica SH 1 1795183 NP_865855.1 CDS RB4007 NC_005027.1 2067163 2067390 R hypothetical protein complement(2067163..2067390) Rhodopirellula baltica SH 1 1795763 NP_865856.1 CDS RB4008 NC_005027.1 2067413 2070805 R best DB hits: BLAST: embl:CAB45032.1; (AL078635) large multi-functional protein; E=1e-22 pir:T36423; probable large, multifunctional secreted protein -; E=4e-18 PFAM: PF00034; Cytochrome c; E=0.24 PF01436; NHL repeat; E=0.25; large multi-functional protein complement(2067413..2070805) Rhodopirellula baltica SH 1 1794001 NP_865857.1 CDS RB4011 NC_005027.1 2070828 2071661 R PMID: 12093901 best DB hits: BLAST: ddbj:BAB05241.1; (AP001512) thioredoxin (thiol:disulfide; E=0.019 ddbj:BAB05296.1; (AP001512) cytochrome c biogenesis (thioredoxin); E=0.12 pir:E69891; cytochrome c biogenesis protein CycX homolog homolog; E=0.15 COG: BH1522; COG0526 Thiol-disulfide isomerase and thioredoxins; E=0.002; hypothetical protein complement(2070828..2071661) Rhodopirellula baltica SH 1 1793010 NP_865858.1 CDS hrpB NC_005027.1 2071700 2074240 R PMID: 10322435 PMID: 9862990 best DB hits: BLAST: pir:B83150; probable ATP-dependent helicase PA3961 [imported] -; E=1e-113 gb:AAC45544.1; (U49051) HelO [Sinorhizobium meliloti]; E=1e-110 pir:E82708; ATP-dependent helicase XF1229 [imported] - Xylella; E=1e-107 COG: PA3961; COG1643 HrpA-like helicases; E=1e-114 PFAM: PF00270; DEAD/DEAH box helicase; E=0.19 PF00271; Helicase conserved C-terminal; E=3.7e-12; ATP-dependent helicase complement(2071700..2074240) Rhodopirellula baltica SH 1 1790326 NP_865859.1 CDS RB4014 NC_005027.1 2074186 2075607 R PMID: 10846217 best DB hits: BLAST: embl:CAB55348.1; (AJ238716) acetyl xylan esterase [Ruminococcus; E=5e-07; acetyl xylan esterase complement(2074186..2075607) Rhodopirellula baltica SH 1 1794918 NP_865860.1 CDS RB4015 NC_005027.1 2075604 2076314 R best DB hits: PFAM: PF00054; Laminin G domain; E=0.012; signal peptide complement(2075604..2076314) Rhodopirellula baltica SH 1 1797118 NP_865861.1 CDS atsG NC_005027.1 2076280 2078145 D PMID: 10950929 best DB hits: BLAST: pir:F70837; probable sulfatase (EC 3.1.6.-) atsG - Mycobacterium; E=3e-26 gb:AAG17207.1; AF217204_1 (AF217204) heparan sulfate sulfamidase; E=2e-20 gb:AAF55607.1; (AE003724) CG14291 gene product [Drosophila; E=5e-20 COG: Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=3e-27 PA0924; COG3083 Predicted hydrolase of alkaline phosphatase; E=7e-05 Rv3299c; COG3119 Arylsulfatase A and related enzymes; E=7e-05 PFAM: PF00884; Sulfatase; E=2.5e-24; sulfatase 2076280..2078145 Rhodopirellula baltica SH 1 1794746 NP_865862.1 CDS RB4021 NC_005027.1 2078305 2078910 D signal peptide 2078305..2078910 Rhodopirellula baltica SH 1 1796364 NP_865863.1 CDS estB NC_005027.1 2078917 2079660 D PMID: 8190066 best DB hits: BLAST: pir:S43880; esterase - Spirulina platensis ----- gb:; E=2e-09 pir:S75304; serine esterase - Synechocystis sp. (strain PCC 6803); E=1e-06 pir:F81704; serine esterase, probable TC0413 [imported] - Chlamydia; E=0.002 COG: sll1284; COG0400 Predicted esterase; E=1e-07 PFAM: PF02230; Phospholipase/Carboxylesterase; E=0.27; esterase 2078917..2079660 Rhodopirellula baltica SH 1 1794031 NP_865864.1 CDS RB4023 NC_005027.1 2079657 2079824 D hypothetical protein 2079657..2079824 Rhodopirellula baltica SH 1 1794934 NP_865865.1 CDS RB4024 NC_005027.1 2079821 2080666 D PMID: 3139632 PMID: 7664125 best DB hits: BLAST: pir:S58235; endo-1,4-beta-xylanase (EC 3.2.1.8) 1 precursor -; E=1e-11 swissprot:P10478; XYNZ_CLOTM ENDO-1,4-BETA-XYLANASE Z PRECURSOR; E=1e-10 embl:CAB93667.1; (AJ272430) endoxylanase [Ruminococcus; E=1e-09 COG: yieL; COG2382 Enterochelin esterase and related enzymes; E=4e-05 DR0779_2; COG2819 Predicted hydrolase of the alpha/beta superfamily; E=0.001; endo-1,4-beta-xylanase 2079821..2080666 Rhodopirellula baltica SH 1 1790779 NP_865866.1 CDS RB4026 NC_005027.1 2080812 2081081 D hypothetical protein 2080812..2081081 Rhodopirellula baltica SH 1 1792578 NP_865867.1 CDS RB4029 NC_005027.1 2081109 2081573 D PMID: 10952301 best DB hits: BLAST: pir:F82453; conserved hypothetical protein VCA0489 [imported] -; E=5e-06 pir:F82462; conserved hypothetical protein VCA0423 [imported] -; E=0.002; hypothetical protein 2081109..2081573 Rhodopirellula baltica SH 1 1794472 NP_865868.1 CDS ppkA NC_005027.1 2081637 2083304 R PMID: 10496921 PMID: 3291115 best DB hits: BLAST: pir:C70584; probable serine-threonine protein kinase - Mycobacterium; E=2e-36 embl:CAB62227.1; (AJ250200) serinethreonine protein; E=2e-36 ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=6e-36 COG: Rv0931c_1; COG0515 Serine/threonine protein kinases; E=2e-37 PFAM: PF00069; Protein kinase domain; E=6.8e-40; serine/threonine protein kinase PpkA complement(2081637..2083304) Rhodopirellula baltica SH 1 1795550 NP_865869.1 CDS RB4032 NC_005027.1 2083440 2084885 R hypothetical protein complement(2083440..2084885) Rhodopirellula baltica SH 1 1790740 NP_865870.1 CDS RB4035 NC_005027.1 2084900 2085007 D hypothetical protein 2084900..2085007 Rhodopirellula baltica SH 1 1792481 NP_865871.1 CDS RB4037 NC_005027.1 2085009 2088578 R best DB hits: PFAM: PF00703; Glycosyl hydrolases family 2,; E=0.0075; hypothetical protein complement(2085009..2088578) Rhodopirellula baltica SH 1 1793167 NP_865872.1 CDS RB4041 NC_005027.1 2088275 2089261 D hypothetical protein 2088275..2089261 Rhodopirellula baltica SH 1 1797099 NP_865873.1 CDS RB4043 NC_005027.1 2089389 2090744 R best DB hits: BLAST: pir:F72591; probable sugar phosphate transferase APE1202 - Aeropyrum; E=5e-11 pir:E71207; probable glucose-1-phosphate thymidylyltransferase -; E=3e-10 pir:G75020; glucose-1-phosphate thymidylyltransferase (grad-2); E=5e-10 COG: APE1202; COG1208 Nucleoside-diphosphate-sugar pyrophosphorylases; E=5e-12 TM1629; COG1207 N-acetylglucosamine-1-phosphate uridyltransferase; E=4e-04 MJ1101; COG1208 Nucleoside-diphosphate-sugar pyrophosphorylases; E=0.006; glucose-1-phosphate thymidylyltransferase complement(2089389..2090744) Rhodopirellula baltica SH 1 1792211 NP_865874.1 CDS RB4046 NC_005027.1 2090795 2090953 D hypothetical protein 2090795..2090953 Rhodopirellula baltica SH 1 1796833 NP_865875.1 CDS RB4048 NC_005027.1 2090905 2092092 D signal peptide 2090905..2092092 Rhodopirellula baltica SH 1 1794917 NP_865876.1 CDS RB4051 NC_005027.1 2092210 2092752 R hypothetical protein complement(2092210..2092752) Rhodopirellula baltica SH 1 1792316 NP_865877.1 CDS RB4053 NC_005027.1 2092821 2094125 R PMID: 11759840 best DB hits: BLAST: embl:CAA82877.1; (Z29987) VLA-2 homologue [Mus musculus]; E=0.40 PFAM: PF00092; von Willebrand factor type A do; E=0.33; signal peptide complement(2092821..2094125) Rhodopirellula baltica SH 1 1794017 NP_865878.1 CDS RB4054 NC_005027.1 2094089 2094352 R hypothetical protein complement(2094089..2094352) Rhodopirellula baltica SH 1 1791877 NP_865879.1 CDS RB4059 NC_005027.1 2094349 2094819 R best DB hits: PFAM: PF00499; NADH-ubiquinone/plastoquinone oxi; E=0.23; hypothetical protein complement(2094349..2094819) Rhodopirellula baltica SH 1 1793405 NP_865880.1 CDS RB4060 NC_005027.1 2094831 2095403 R hypothetical protein complement(2094831..2095403) Rhodopirellula baltica SH 1 1792416 NP_865881.1 CDS RB4061 NC_005027.1 2095498 2096964 D PMID: 8817497 PMID: 8439290 best DB hits: BLAST: pir:E82546; pre-pilin leader peptidase XF2537 [imported] - Xylella; E=5e-06 swissprot:P36642; LEP4_PSEPU TYPE 4 PREPILIN-LIKE PROTEINS LEADER; E=1e-05 gb:AAC17878.1; (AF062531) signal peptidase [Pseudomonas putida; E=1e-04 COG: XF2537; COG1989 Signal peptidase, cleaves prepilin-like proteins; E=5e-07 PFAM: PF01478; Type III leader peptidase famil; E=3.7e-05; type 4 prepilin-like proteins leader peptide processing enzyme 2095498..2096964 Rhodopirellula baltica SH 1 1796496 NP_865882.1 CDS RB4066 NC_005027.1 2097008 2097298 R hypothetical protein complement(2097008..2097298) Rhodopirellula baltica SH 1 1795821 NP_865883.1 CDS moaA NC_005027.1 2097313 2098392 D PMID: 8588735 PMID: 7890743 best DB hits: BLAST: pir:S57490; molybdopterin cofactor synthesis protein - Arthrobacter; E=2e-74 swissprot:Q44118; MOAA_ARTNI PROBABLE MOLYBDOPTERIN COFACTOR; E=2e-74 swissprot:Q39055; CNX2_ARATH MOLYBDOPTERIN BIOSYNTHESIS CNX2; E=4e-64 COG: Rv0869c; COG2896 Molybdenum cofactor biosynthesis enzyme; E=5e-59 PFAM: PF01444; moaA / nifB / pqqE family; E=2.5e-62; molybdopterin cofactor synthesis protein A 2097313..2098392 Rhodopirellula baltica SH 1 1793739 NP_865884.1 CDS RB4071 NC_005027.1 2098441 2099550 D best DB hits: BLAST: pir:H83105; conserved hypothetical protein PA4319 [imported] -; E=3e-16 pir:S75694; hypothetical protein slr1478 - Synechocystis sp. (strain; E=2e-09 ddbj:BAB04452.1; (AP001509) BH0733~unknown conserved protein in; E=3e-05 COG: PA4319; COG1300 Uncharacterized membrane protein; E=2e-17 PFAM: PF01944; Integral membrane protein DUF95; E=0.69; hypothetical protein 2098441..2099550 Rhodopirellula baltica SH 1 1793709 NP_865885.1 CDS RB4073 NC_005027.1 2099516 2100616 D signal peptide 2099516..2100616 Rhodopirellula baltica SH 1 1791992 NP_865886.1 CDS RB4077 NC_005027.1 2100715 2101524 D best DB hits: BLAST: ddbj:BAB04448.1; (AP001509) BH0729~unknown conserved protein in; E=0.30; signal peptide 2100715..2101524 Rhodopirellula baltica SH 1 1790486 NP_865887.1 CDS RB4079 NC_005027.1 2101521 2103161 D hypothetical protein 2101521..2103161 Rhodopirellula baltica SH 1 1796206 NP_865888.1 CDS moxR NC_005027.1 2103158 2104297 D PMID: 8997703 PMID: 1657871 PMID: 9163922 best DB hits: BLAST: pir:C83106; conserved hypothetical protein PA4322 [imported] -; E=2e-79 pir:E70792; probable regulatory protein - Mycobacterium tuberculosis; E=7e-74 embl:CAB90929.1; (AL355774) regulatory protein; E=2e-69 COG: PA4322; COG0714 MoxR-like ATPases; E=2e-80 PFAM: PF00004; ATPase associated with va; E=0.0093 PF01078; Magnesium chelatase, subunit Chl; E=0.0014; regulatory protein 2103158..2104297 Rhodopirellula baltica SH 1 1795976 NP_865889.1 CDS RB4083 NC_005027.1 2104537 2104647 D hypothetical protein 2104537..2104647 Rhodopirellula baltica SH 1 1793279 NP_865890.1 CDS RB4084 NC_005027.1 2104677 2105036 D hypothetical protein 2104677..2105036 Rhodopirellula baltica SH 1 1795145 NP_865891.1 CDS RB4087 NC_005027.1 2105146 2105904 D PMID: 11407917 best DB hits: BLAST: gb:AAB36936.1; (U77780) unknown [Chlorobium limicola]; E=6e-11 gb:AAD42964.1; AF144883_1 (AF144883) partition protein; E=7e-08 gb:AAD21669.1; (AF133830) pVS1 partitioning protein [Shuttle; E=8e-08 COG: DR0013; COG1192 ATPases involved in chromosome partitioning; E=1e-06 PH0612; COG0455 ATPases involved in chromosome partitioning; E=2e-04 aq_aa35; COG1192 ATPases involved in chromosome partitioning; E=2e-04 PFAM: PF02374; Anion-transporting ATPase; E=2.9e-06 PF01583; Adenylylsulfate kinase; E=0.00057 PF00991; ParA family ATPase; E=0.14; partition protein 2105146..2105904 Rhodopirellula baltica SH 1 1793959 NP_865892.1 CDS RB4090 NC_005027.1 2105915 2106241 D hypothetical protein 2105915..2106241 Rhodopirellula baltica SH 1 1791709 NP_865893.1 CDS ydcC NC_005027.1 2106238 2107443 D PMID: 8041625 best DB hits: BLAST: gb:AAG55028.1; AE005248_9 (AE005248) receptor; E=4e-61 gb:AAG54539.1; AE005200_1 (AE005200) Z0271 gene product; E=1e-60 swissprot:P28917; YDCC_ECOLI H REPEAT-ASSOCIATED PROTEIN IN; E=1e-60 PFAM: PF01811; Transposase; E=1.3e-65; H repeat-containing protein ydcC 2106238..2107443 Rhodopirellula baltica SH 1 1794958 NP_865894.1 CDS RB4093 NC_005027.1 2107600 2107737 D hypothetical protein 2107600..2107737 Rhodopirellula baltica SH 1 1791256 NP_865895.1 CDS RB4094 NC_005027.1 2107798 2108211 D hypothetical protein 2107798..2108211 Rhodopirellula baltica SH 1 1795340 NP_865896.1 CDS RB4097 NC_005027.1 2108244 2110445 D best DB hits: BLAST: gb:AAB91577.2; (AF242881) ymc [Agrobacterium tumefaciens]; E=1e-04 gb:AAF01192.1; AF179401_1 (AF179401) epoxidase; E=0.11 pir:D70028; conserved hypothetical protein yvaO - Bacillus subtilis; E=0.16 PFAM: PF01381; Helix-turn-helix; E=3.4e-10; hypothetical protein 2108244..2110445 Rhodopirellula baltica SH 1 1792563 NP_865897.1 CDS RB4099 NC_005027.1 2110438 2111625 D best DB hits: PFAM: PF01658; Myo-inositol-1-phosphate synth; E=0.89; signal peptide 2110438..2111625 Rhodopirellula baltica SH 1 1795497 NP_865898.1 CDS RB4100 NC_005027.1 2111716 2112267 D hypothetical protein 2111716..2112267 Rhodopirellula baltica SH 1 1790421 NP_865899.1 CDS RB4104 NC_005027.1 2112335 2112553 D hypothetical protein 2112335..2112553 Rhodopirellula baltica SH 1 1792342 NP_865900.1 CDS radC NC_005027.1 2112565 2113191 D PMID: 741263 best DB hits: BLAST: swissprot:Q9X1P3; RADC_THEMA DNA REPAIR PROTEIN RADC HOMOLOG; E=6e-25 ddbj:BAB06751.1; (AP001517) DNA repair protein [Bacillus; E=3e-23 swissprot:Q02170; RADC_BACSU DNA REPAIR PROTEIN RADC HOMOLOG; E=2e-22 COG: TM1557; COG2003 DNA repair proteins; E=5e-26; hypothetical protein 2112565..2113191 Rhodopirellula baltica SH 1 1791558 NP_865901.1 CDS RB4106 NC_005027.1 2113242 2114714 R hypothetical protein complement(2113242..2114714) Rhodopirellula baltica SH 1 1791643 NP_865902.1 CDS RB4107 NC_005027.1 2114854 2114982 D hypothetical protein 2114854..2114982 Rhodopirellula baltica SH 1 1794416 NP_865903.1 CDS RB4108 NC_005027.1 2114968 2115666 R PMID: 11214968; hypothetical protein complement(2114968..2115666) Rhodopirellula baltica SH 1 1790902 NP_865904.1 CDS RB4109 NC_005027.1 2115765 2115926 D hypothetical protein 2115765..2115926 Rhodopirellula baltica SH 1 1793780 NP_865905.1 CDS RB4111 NC_005027.1 2115860 2116267 R hypothetical protein complement(2115860..2116267) Rhodopirellula baltica SH 1 1790384 NP_865906.1 CDS RB4112 NC_005027.1 2116228 2116365 R hypothetical protein complement(2116228..2116365) Rhodopirellula baltica SH 1 1795244 NP_865907.1 CDS ydcC NC_005027.1 2116503 2117681 R PMID: 2542093 best DB hits: BLAST: gb:AAG55028.1; AE005248_9 (AE005248) receptor; E=4e-61 gb:AAG54539.1; AE005200_1 (AE005200) Z0271 gene product; E=1e-60 swissprot:P28917; YDCC_ECOLI H REPEAT-ASSOCIATED PROTEIN IN; E=1e-60 PFAM: PF01811; Transposase; E=1.3e-65; H repeat-containing protein ydcC complement(2116503..2117681) Rhodopirellula baltica SH 1 1793408 NP_865908.1 CDS RB4114 NC_005027.1 2117690 2117971 D hypothetical protein 2117690..2117971 Rhodopirellula baltica SH 1 1795562 NP_865909.1 CDS RB4115 NC_005027.1 2118055 2119110 R best DB hits: BLAST: embl:CAC01558.1; (AL391039) conserved hypothetical protein; E=3e-27 gb:AAG19482.1; (AE005040) sulfite oxidase homolog; YuiH; E=3e-27 pir:A70013; sulfite oxidase homolog yuiH - Bacillus subtilis -----; E=6e-26 COG: VNG1084G; COG2041 Uncharacterized enzymes, related to nitrate; E=3e-28 sll1011_2; COG1357 Uncharacterized low-complexity proteins; E=1e-11 PA4692; COG2041 Uncharacterized enzymes, related to nitrate; E=2e-11 PFAM: PF00174; Oxidoreductase molybdopterin b; E=0.16 PF00805; Pentapeptide repeats (8 copies; E=3e-06; nitrate reductase related protein complement(2118055..2119110) Rhodopirellula baltica SH 1 1791303 NP_865910.1 CDS blaR NC_005027.1 2119149 2122532 R PMID: 3040663 PMID: 3260234 PMID: 2404938 best DB hits: BLAST: swissprot:P12287; BLAR_BACLI REGULATORY PROTEIN BLAR1 -----; E=2e-05 pir:I39942; penicillinase antirepressor penJ - Bacillus; E=5e-05 swissprot:P18357; BLAR_STAAU REGULATORY PROTEIN BLAR1 -----; E=3e-04 PFAM: PF01271; Granin (chromogranin or secretograni; E=0.87; regulatory protein blaR1 complement(2119149..2122532) Rhodopirellula baltica SH 1 1791570 NP_865911.1 CDS blaI NC_005027.1 2122535 2122978 R PMID: 3096969 PMID: 3305074 PMID: 3260234 best DB hits: BLAST: swissprot:P06555; BLAI_BACLI PENICILLINASE REPRESSOR (REGULATORY; E=7e-10 pir:B28183; beta-lactamase repressor protein - Bacillus; E=8e-09 pir:S74550; hypothetical protein slr0240 - Synechocystis sp. (strain; E=2e-05 PFAM: PF00392; Bacterial regulatory proteins, gntR; E=0.082; penicillinase repressor complement(2122535..2122978) Rhodopirellula baltica SH 1 1792278 NP_865912.1 CDS RB4121 NC_005027.1 2123102 2123269 D signal peptide 2123102..2123269 Rhodopirellula baltica SH 1 1791236 NP_865913.1 CDS RB4123 NC_005027.1 2123372 2123818 D best DB hits: BLAST: pir:S75246; hypothetical protein slr1023 - Synechocystis sp. (strain; E=1e-20 pir:G71082; probable mannose-1-phosphate guanylyl transferase -; E=0.65; hypothetical protein 2123372..2123818 Rhodopirellula baltica SH 1 1791278 NP_865914.1 CDS RB4127 NC_005027.1 2124045 2124884 D best DB hits: BLAST: pir:T37061; probable secreted protein - Streptomyces coelicolor; E=5e-26 pir:T35483; hypothetical protein SC6C5.12c SC6C5.12c - Streptomyces; E=2e-17 swissprot:P75772; YBHP_ECOLI HYPOTHETICAL 28.8 KDA PROTEIN IN; E=3e-11 PFAM: PF00783; Inositol polyphosphate phosph; E=0.5; hypothetical protein 2124045..2124884 Rhodopirellula baltica SH 1 1792636 NP_865915.1 CDS RB4128 NC_005027.1 2124835 2125032 D hypothetical protein 2124835..2125032 Rhodopirellula baltica SH 1 1794439 NP_865916.1 CDS RB4129 NC_005027.1 2125088 2126368 D PMID: 99287316 best DB hits: BLAST: pir:C72377; hypothetical protein TM0440 - Thermotoga maritima; E=1e-22; hypothetical protein 2125088..2126368 Rhodopirellula baltica SH 1 1792292 NP_865917.1 CDS yjjN NC_005027.1 2126371 2127399 D PMID: 3622514 PMID: 1593644 best DB hits: BLAST: swissprot:P39400; YJJN_ECOLI HYPOTHETICAL ZINC-TYPE ALCOHOL; E=1e-51 gb:AAG59541.1; AE005667_5 (AE005667) oxidoreductase; E=9e-51 pir:F69852; L-iditol 2-dehydrogenase (EC 1.1.1.14) homolog yjmD -; E=1e-38 COG: yjjN; COG1063 Threonine dehydrogenase and related Zn-dependent; E=1e-52 PFAM: PF01494; FAD binding domain; E=0.28 PF00070; Pyridine nucleotide-disulphide; E=0.0008 PF00107; Zinc-binding dehydrogenases; E=1.3e-68; zinc-type alcohol dehydrogenase 2126371..2127399 Rhodopirellula baltica SH 1 1796803 NP_865918.1 CDS RB4132 NC_005027.1 2127468 2127818 R best DB hits: BLAST: embl:CAA53530.1; (X75926) ABC transporter [Mus musculus]; E=0.53; hypothetical protein complement(2127468..2127818) Rhodopirellula baltica SH 1 1790751 NP_865919.1 CDS phoB NC_005027.1 2128240 2128680 D PMID: 8905231 best DB hits: BLAST: embl:CAA11074.1; (AJ223073) phosphate regulatory protein; E=3e-11 pir:B70152; response regulatory protein (rrp-1) homolog - Lyme; E=1e-10 gb:AAD30120.2; (AF135389) DNA binding response regulator RpaA; E=2e-10 COG: BB0419_1; COG0784 CheY-like receiver domains; E=1e-11 slr0115; COG0745 Response regulators consisting of a CheY-like; E=2e-10 slr1305_1; COG0784 CheY-like receiver domains; E=3e-09 PFAM: PF00072; Response regulator receiver doma; E=1.4e-18; regulatory components of sensory transduction system 2128240..2128680 Rhodopirellula baltica SH 1 1791965 NP_865920.1 CDS hydH NC_005027.1 2128586 2129998 D PMID: 2666400 PMID: 11243806 best DB hits: BLAST: gb:AAF33505.1; (AF170176) Salmonella typhimurium sensor protein; E=1e-13 gb:AAG59806.1; AF305914_1 (AF305914) HydH [Klebsiella oxytoca]; E=2e-13 pir:S70528; sensor protein pilS - Myxococcus xanthus ----- gb:; E=4e-13 COG: BH3477; COG0642 Sensory transduction histidine kinases; E=2e-13 PFAM: PF00512; His Kinase A (phosphoacceptor) doma; E=2e-11 PF02518; Histidine kinase-, DNA gyrase B-, p; E=2.9e-21; sensor protein (HYDH)- sensory transduction histidine kinase 2128586..2129998 Rhodopirellula baltica SH 1 1794819 NP_865921.1 CDS RB4142 NC_005027.1 2130009 2130140 D hypothetical protein 2130009..2130140 Rhodopirellula baltica SH 1 1796346 NP_865922.1 CDS gatA NC_005027.1 2130113 2131612 D PMID: 8905231 best DB hits: BLAST: swissprot:P73558; GATA_SYNY3 GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE; E=1e-123 pir:H83084; Glu-tRNA(Gln) amidotransferase subunit A PA4483; E=1e-121 swissprot:Q9Z580; GATA_STRCO GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE; E=1e-120 COG: slr0877; COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; E=1e-124 PFAM: PF01425; Amidase; E=1.1e-195; glutamyl-tRNA(Gln) amidotransferase subunit A 2130113..2131612 Rhodopirellula baltica SH 1 1792354 NP_865923.1 CDS RB4145 NC_005027.1 2131661 2131933 R hypothetical protein complement(2131661..2131933) Rhodopirellula baltica SH 1 1789963 NP_865924.1 CDS RB4147 NC_005027.1 2131928 2132338 D hypothetical protein 2131928..2132338 Rhodopirellula baltica SH 1 1795623 NP_865925.1 CDS RB4149 NC_005027.1 2132396 2132554 R hypothetical protein complement(2132396..2132554) Rhodopirellula baltica SH 1 1794196 NP_865926.1 CDS RB4150 NC_005027.1 2132600 2133433 R hypothetical protein complement(2132600..2133433) Rhodopirellula baltica SH 1 1794307 NP_865927.1 CDS RB4151 NC_005027.1 2133421 2134521 R best DB hits: BLAST: pir:B70469; type IV pilus assembly protein TapB - Aquifex aeolicus; E=0.001 embl:CAA10651.1; (AJ132364) PilB protein [Pseudomonas stutzeri]; E=0.005 pir:S55026; secretion protein - Aeromonas salmonicida ----- gb:; E=0.020 COG: aq_1971; COG2804 Predicted ATPases involved in pili biogenesis, PilB; E=9e-05; type IV pilus assembly protein TapB complement(2133421..2134521) Rhodopirellula baltica SH 1 1791015 NP_865928.1 CDS RB4152 NC_005027.1 2134647 2135369 D hypothetical protein 2134647..2135369 Rhodopirellula baltica SH 1 1796120 NP_865929.1 CDS RB4155 NC_005027.1 2135376 2135555 D hypothetical protein 2135376..2135555 Rhodopirellula baltica SH 1 1790392 NP_865930.1 CDS RB4156 NC_005027.1 2135596 2136441 D PMID: 97000351 best DB hits: BLAST: embl:CAB77297.1; (AL160312) conserved hypothetical protein; E=7e-28 pir:E75527; conserved hypothetical protein - Deinococcus radiodurans; E=4e-16 pir:B70392; hypothetical protein aq_1070 - Aquifex aeolicus -----; E=4e-16 COG: DR0370; COG1427 Predicted periplasmic solute-binding protein; E=4e-17 PFAM: PF02621; Uncharacterized ACR, COG1427; E=1.4e-26; hypothetical protein 2135596..2136441 Rhodopirellula baltica SH 1 1796013 NP_865931.1 CDS RB4160 NC_005027.1 2136438 2137598 D PMID: 98196666 best DB hits: BLAST: ddbj:BAB06862.1; (AP001517) BH3143~unknown conserved protein in; E=4e-85 pir:H70368; conserved hypothetical protein aq_789 - Aquifex aeolicus; E=1e-84 pir:H64601; conserved hypothetical protein HP0656 - Helicobacter; E=2e-80 COG: BH3143; COG1060 Thiamine biosynthesis enzyme ThiH and related; E=4e-86; oxidoreductase 2136438..2137598 Rhodopirellula baltica SH 1 1790587 NP_865932.1 CDS malQ NC_005027.1 2137708 2139225 D PMID: 10677288 best DB hits: BLAST: swissprot:O87172; MALQ_THEAQ 4-ALPHA-GLUCANOTRANSFERASE; E=1e-119 swissprot:P72785; MALQ_SYNY3 4-ALPHA-GLUCANOTRANSFERASE; E=1e-118 swissprot:P29851; MALQ_STRPN 4-ALPHA-GLUCANOTRANSFERASE; E=1e-114 COG: sll1676; COG1640 4-alpha-glucanotransferase; E=1e-119 PFAM: PF02446; 4-alpha-glucanotransferase; E=3.9e-185; 4-alpha-glucanotransferase 2137708..2139225 Rhodopirellula baltica SH 1 1794576 NP_865933.1 CDS RB4162 NC_005027.1 2139180 2139521 R hypothetical protein complement(2139180..2139521) Rhodopirellula baltica SH 1 1795719 NP_865934.1 CDS algU NC_005027.1 2139632 2141797 D PMID: 8432708 PMID: 7961421 best DB hits: BLAST: gb:AAC45219.1; (U87308) extracytoplasmic function alternative; E=4e-10 gb:AAC45221.1; (U87307) extracytoplasmic function alternative; E=5e-10 pir:H70507; probable sigE protein - Mycobacterium tuberculosis; E=8e-10 COG: Rv1221; COG1595 DNA-directed RNA polymerase specialized sigma; E=7e-11 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=0.065; RNA polymerase sigma-H factor 2139632..2141797 Rhodopirellula baltica SH 1 1791741 NP_865935.1 CDS RB4166 NC_005027.1 2141819 2141950 D hypothetical protein 2141819..2141950 Rhodopirellula baltica SH 1 1790630 NP_865936.1 CDS RB4167 NC_005027.1 2141907 2144846 R PMID: 96312514 best DB hits: BLAST: ddbj:BAB14717.1; (AK023902) unnamed protein product [Homo; E=4e-22 gb:AAC59865.1; (U37373) up-regulated by thyroid hormone in; E=2e-21 ddbj:BAA97210.1; (AB020751) gb AAD55298.1~gene_id:MRG21.5~strong; E=4e-19 COG: slr1608; COG2133 Glucose/sorbosone dehydrogenases; E=1e-11 sll1245; COG2010 Cytochrome c, mono- and diheme variants; E=0.003 XF1740; COG2133 Glucose/sorbosone dehydrogenases; E=0.009 PFAM: PF00034; Cytochrome c; E=0.049; hypothetical protein complement(2141907..2144846) Rhodopirellula baltica SH 1 1793911 NP_865937.1 CDS RB4172 NC_005027.1 2144886 2145026 R hypothetical protein complement(2144886..2145026) Rhodopirellula baltica SH 1 1794841 NP_865938.1 CDS ftsY NC_005027.1 2145041 2146054 D PMID: 7584053 PMID: 94301771 best DB hits: BLAST: ddbj:BAB06205.1; (AP001515) signal recognition particle (docking; E=2e-61 embl:CAB13468.1; (Z99112) signal recognition particle (docking; E=7e-61 swissprot:P51835; FTSY_BACSU CELL DIVISION PROTEIN FTSY HOMOLOG; E=2e-60 COG: BH2486; COG0552 Signal recognition particle GTPase; E=2e-62 PFAM: PF01443; Viral (Superfamily 1) RNA hel; E=0.51 PF02223; Thymidylate kinase; E=0.014 PF00448; SRP54-type protein, GTPase do; E=7.4e-103; cell division protein FtsY 2145041..2146054 Rhodopirellula baltica SH 1 1797107 NP_865939.1 CDS RB4174 NC_005027.1 2146060 2146641 D tRNA (ms[2]io[6]A)-hydroxylase 2146060..2146641 Rhodopirellula baltica SH 1 1790612 NP_865940.1 CDS RB4176 NC_005027.1 2146638 2146928 R hypothetical protein complement(2146638..2146928) Rhodopirellula baltica SH 1 1789935 NP_865941.1 CDS RB4178 NC_005027.1 2146908 2147984 D signal peptide 2146908..2147984 Rhodopirellula baltica SH 1 1792537 NP_865942.1 CDS RB4179 NC_005027.1 2148090 2150363 R PMID: 8346225 best DB hits: BLAST: pir:A48291; ornithine decarboxylase inhibitor - Escherichia coli; E=4e-70 swissprot:Q06065; ATOC_ECOLI ACETOACETATE METABOLISM REGULATORY; E=4e-70 gb:AAG45333.1; AF273214_1 (AF273214) SasR [Myxococcus xanthus]; E=1e-69 COG: atoC; COG2204 AAA superfamily ATPases with N-terminal receiver; E=4e-71 aq_218_2; COG1221 NtrC family transcriptional regulators, ATPase; E=1e-63 TP0519; COG2204 AAA superfamily ATPases with N-terminal receiver; E=1e-63 PFAM: PF00498; FHA domain; E=6.7e-16 PF00158; Sigma-54 interaction domain; E=8.9e-140; ornithine decarboxylase inhibitor- sigma54 transciptional regulator complement(2148090..2150363) Rhodopirellula baltica SH 1 1790520 NP_865943.1 CDS RB4182 NC_005027.1 2150524 2151873 D signal peptide 2150524..2151873 Rhodopirellula baltica SH 1 1794350 NP_865944.1 CDS RB4185 NC_005027.1 2151951 2152220 D hypothetical protein 2151951..2152220 Rhodopirellula baltica SH 1 1795459 NP_865945.1 CDS ppkA NC_005027.1 2152190 2156053 R PMID: 99426839 best DB hits: BLAST: gb:AAC16938.1; (AC002338) protein kinase [Arabidopsis; E=3e-14 ddbj:BAA83688.1; (AB011967) OsPK4 [Oryza sativa]; E=8e-14 gb:AAD03499.2; (AF035395) serinethreonine protein kinase PpkA; E=1e-12 COG: PA0074; COG0515 Serine/threonine protein kinases; E=2e-13 PFAM: PF00069; Protein kinase domain; E=2.3e-28; serine/threonine protein kinase PpkA complement(2152190..2156053) Rhodopirellula baltica SH 1 1795957 NP_865946.1 CDS RB4193 NC_005027.1 2156128 2156295 R hypothetical protein complement(2156128..2156295) Rhodopirellula baltica SH 1 1790625 NP_865947.1 CDS RB4194 NC_005027.1 2156524 2156685 R hypothetical protein complement(2156524..2156685) Rhodopirellula baltica SH 1 1794095 NP_865948.1 CDS RB4195 NC_005027.1 2156679 2157056 D hypothetical protein 2156679..2157056 Rhodopirellula baltica SH 1 1793079 NP_865949.1 CDS RB4196 NC_005027.1 2157140 2157484 D hypothetical protein 2157140..2157484 Rhodopirellula baltica SH 1 1792830 NP_865950.1 CDS RB4197 NC_005027.1 2157383 2157721 R hypothetical protein complement(2157383..2157721) Rhodopirellula baltica SH 1 1796254 NP_865951.1 CDS RB4199 NC_005027.1 2157738 2158172 R hypothetical protein complement(2157738..2158172) Rhodopirellula baltica SH 1 1795301 NP_865952.1 CDS RB4201 NC_005027.1 2158153 2159034 R hypothetical protein complement(2158153..2159034) Rhodopirellula baltica SH 1 1792483 NP_865953.1 CDS RB4203 NC_005027.1 2159073 2159675 R hypothetical protein complement(2159073..2159675) Rhodopirellula baltica SH 1 1795229 NP_865954.1 CDS RB4204 NC_005027.1 2159672 2159851 R hypothetical protein complement(2159672..2159851) Rhodopirellula baltica SH 1 1791702 NP_865955.1 CDS RB4205 NC_005027.1 2159880 2160275 D hypothetical protein 2159880..2160275 Rhodopirellula baltica SH 1 1794667 NP_865956.1 CDS RB4206 NC_005027.1 2160320 2160610 D hypothetical protein 2160320..2160610 Rhodopirellula baltica SH 1 1790139 NP_865957.1 CDS RB4208 NC_005027.1 2160650 2160823 D hypothetical protein 2160650..2160823 Rhodopirellula baltica SH 1 1796234 NP_865958.1 CDS RB4210 NC_005027.1 2160917 2161363 D hypothetical protein 2160917..2161363 Rhodopirellula baltica SH 1 1791907 NP_865959.1 CDS RB4211 NC_005027.1 2161348 2161641 R hypothetical protein complement(2161348..2161641) Rhodopirellula baltica SH 1 1791480 NP_865960.1 CDS RB4213 NC_005027.1 2161576 2162280 D hypothetical protein 2161576..2162280 Rhodopirellula baltica SH 1 1791973 NP_865961.1 CDS RB4215 NC_005027.1 2162210 2162542 R PMID: 3934047 best DB hits: BLAST: swissprot:P10427; YIM3_BPPH1 HYPOTHETICAL IMMUNITY REGION; E=0.28 pir:IMBP4; site-specific recombinase for integration and excision; E=0.28; immunity region protein 3 complement(2162210..2162542) Rhodopirellula baltica SH 1 1791686 NP_865962.1 CDS RB4216 NC_005027.1 2162544 2162774 R best DB hits: BLAST: pir:C71228; hypothetical protein PH0085 - Pyrococcus horikoshii; E=0.87; hypothetical protein complement(2162544..2162774) Rhodopirellula baltica SH 1 1793813 NP_865963.1 CDS RB4217 NC_005027.1 2162659 2162922 D signal peptide 2162659..2162922 Rhodopirellula baltica SH 1 1796152 NP_865964.1 CDS RB4218 NC_005027.1 2162756 2163097 D hypothetical protein 2162756..2163097 Rhodopirellula baltica SH 1 1792480 NP_865965.1 CDS RB4219 NC_005027.1 2163081 2163305 R hypothetical protein complement(2163081..2163305) Rhodopirellula baltica SH 1 1791509 NP_865966.1 CDS RB4220 NC_005027.1 2163241 2163627 D hypothetical protein 2163241..2163627 Rhodopirellula baltica SH 1 1795390 NP_865967.1 CDS RB4222 NC_005027.1 2163714 2163875 R hypothetical protein complement(2163714..2163875) Rhodopirellula baltica SH 1 1791357 NP_865968.1 CDS RB4223 NC_005027.1 2163855 2164706 D best DB hits: BLAST: gb:AAD03908.1; (AF079317) unknown [Sphingomonas aromaticivorans]; E=3e-05 pir:D70590; hypothetical protein Rv3226c - Mycobacterium; E=1e-04 gb:AAF97194.1; AF268611_18 (AF268611) unknown [uncultured marine; E=0.003 COG: Rv3226c; COG2135 Uncharacterized ACR; E=1e-05 PFAM: PF02586; Uncharacterized ACR, COG2135; E=8.4e-08; hypothetical protein 2163855..2164706 Rhodopirellula baltica SH 1 1795846 NP_865969.1 CDS dinP NC_005027.1 2164703 2165893 D PMID: 7596361 best DB hits: BLAST: swissprot:Q47155; DINP_ECOLI DNA-DAMAGE-INDUCIBLE PROTEIN P; E=5e-54 gb:AAG54556.1; AE005201_9 (AE005201) damage-inducible protein P; E=1e-53 pir:A81861; impBmucB/samB family protein NMA1661 [imported] -; E=3e-52 COG: dinP; COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA; E=5e-55 VC2287; COG0389 Nucleotidyltransferase/DNA polymerase involved in; E=1e-51 UU437; COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA; E=1e-25 PFAM: PF00817; impB/mucB/samB family; E=5.9e-115; DNA-damage-inducible protein P 2164703..2165893 Rhodopirellula baltica SH 1 1793178 NP_865970.1 CDS RB4227 NC_005027.1 2165985 2166158 D hypothetical protein 2165985..2166158 Rhodopirellula baltica SH 1 1792412 NP_865971.1 CDS RB4228 NC_005027.1 2166100 2166405 D hypothetical protein 2166100..2166405 Rhodopirellula baltica SH 1 1794635 NP_865972.1 CDS RB4229 NC_005027.1 2166595 2167854 R PMID: 8843436 best DB hits: BLAST: embl:CAB62702.1; (AL133422) hypothetical protein SCM1.44.; E=7e-37 pir:S74705; hypothetical protein slr1303 - Synechocystis sp. (strain; E=1e-20 pir:H70793; hypothetical protein Rv3703c - Mycobacterium; E=1e-19 COG: slr1303; COG1262 Uncharacterized BCR; E=1e-21; hypothetical protein complement(2166595..2167854) Rhodopirellula baltica SH 1 1791562 NP_865973.1 CDS RB4230 NC_005027.1 2167788 2168783 R PMID: 97061201 best DB hits: BLAST: embl:CAC02633.1; (AL390114) possible hypothetical 35.4 Kd protein; E=1e-45 pir:S74850; hypothetical protein slr0865 - Synechocystis sp. (strain; E=1e-34 pir:F70793; hypothetical protein Rv3701c - Mycobacterium; E=2e-33; hypothetical protein complement(2167788..2168783) Rhodopirellula baltica SH 1 1793341 NP_865974.1 CDS RB4232 NC_005027.1 2168892 2169059 D hypothetical protein 2168892..2169059 Rhodopirellula baltica SH 1 1795485 NP_865975.1 CDS RB4233 NC_005027.1 2169112 2172021 R hypothetical protein complement(2169112..2172021) Rhodopirellula baltica SH 1 1796725 NP_865976.1 CDS RB4239 NC_005027.1 2171936 2173615 R hypothetical protein complement(2171936..2173615) Rhodopirellula baltica SH 1 1792540 NP_865977.1 CDS RB4241 NC_005027.1 2173612 2174172 R PMID: 3052291 PMID: 8052622 best DB hits: BLAST: pir:H75550; RNA polymerase sigma-E factor - Deinococcus radiodurans; E=4e-08 embl:CAB72200.1; (AL138851) RNA polymerase sigma factor; E=1e-06 swissprot:P45215; YE59_HAEIN PROBABLE RNA POLYMERASE SIGMA FACTOR; E=2e-06 COG: DR0180; COG1595 DNA-directed RNA polymerase specialized sigma; E=3e-09 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=2.3e-05; RNA polymerase sigma-E factor complement(2173612..2174172) Rhodopirellula baltica SH 1 1794756 NP_865978.1 CDS RB4243 NC_005027.1 2174155 2174331 D hypothetical protein 2174155..2174331 Rhodopirellula baltica SH 1 1794010 NP_865979.1 CDS RB4245 NC_005027.1 2174390 2174839 D PMID: 11679351; signal peptide 2174390..2174839 Rhodopirellula baltica SH 1 1793102 NP_865980.1 CDS hrpA NC_005027.1 2174799 2178953 D PMID: 7899078 best DB hits: BLAST: pir:H83232; probable ATP-dependent helicase PA3297 [imported] -; E=0.0 pir:F82207; ATP-dependent helicase HrpA VC1382 [imported] - Vibrio; E=0.0 swissprot:P43329; HRPA_ECOLI ATP-DEPENDENT HELICASE HRPA -----; E=0.0 COG: PA3297; COG1643 HrpA-like helicases; E=0.0 PFAM: PF00005; ABC transporter; E=0.016 PF00270; DEAD/DEAH box helicase; E=0.66 PF00271; Helicase conserved C-terminal; E=1.3e-12; ATP-dependent helicase hrpA 2174799..2178953 Rhodopirellula baltica SH 1 1794865 NP_865981.1 CDS RB4248 NC_005027.1 2178958 2179545 D PMID: 21595285 best DB hits: BLAST: pir:E69833; conserved hypothetical protein yhjE - Bacillus subtilis; E=0.65; hypothetical protein 2178958..2179545 Rhodopirellula baltica SH 1 1796231 NP_865982.1 CDS RB4250 NC_005027.1 2179578 2179745 D hypothetical protein 2179578..2179745 Rhodopirellula baltica SH 1 1794555 NP_865983.1 CDS RB4251 NC_005027.1 2179990 2180118 R hypothetical protein complement(2179990..2180118) Rhodopirellula baltica SH 1 1791074 NP_865984.1 CDS RB4252 NC_005027.1 2180073 2180222 R hypothetical protein complement(2180073..2180222) Rhodopirellula baltica SH 1 1791655 NP_865985.1 CDS RB4255 NC_005027.1 2180192 2180806 R hypothetical protein complement(2180192..2180806) Rhodopirellula baltica SH 1 1791148 NP_865986.1 CDS RB4256 NC_005027.1 2180303 2181379 D best DB hits: BLAST: gb:AAB41030.2; (U23947) LipA [Mycoplasma pulmonis]; E=0.31 gb:AAC55162.1; (U60315) MC034L [Molluscum contagiosum virus; E=0.69 pir:T02318; hypothetical protein F13P17.14 - Arabidopsis thaliana; E=0.82; signal peptide 2180303..2181379 Rhodopirellula baltica SH 1 1790637 NP_865987.1 CDS RB4258 NC_005027.1 2180966 2181475 R hypothetical protein complement(2180966..2181475) Rhodopirellula baltica SH 1 1791250 NP_865988.1 CDS RB4259 NC_005027.1 2181412 2181696 D hypothetical protein 2181412..2181696 Rhodopirellula baltica SH 1 1796317 NP_865989.1 CDS RB4260 NC_005027.1 2181703 2182491 D hypothetical protein 2181703..2182491 Rhodopirellula baltica SH 1 1792226 NP_865990.1 CDS RB4262 NC_005027.1 2182569 2182739 R hypothetical protein complement(2182569..2182739) Rhodopirellula baltica SH 1 1790098 NP_865991.1 CDS RB4264 NC_005027.1 2182795 2183157 R signal peptide complement(2182795..2183157) Rhodopirellula baltica SH 1 1789900 NP_865992.1 CDS RB4266 NC_005027.1 2183250 2183414 D hypothetical protein 2183250..2183414 Rhodopirellula baltica SH 1 1789992 NP_865993.1 CDS RB4267 NC_005027.1 2183505 2184137 R PMID: 11065374 best DB hits: BLAST: ddbj:BAA82053.1; (AB022175) a-type carbonic anhydrase; E=2e-20 pir:F82479; carbonic anhydrase VCA0274 [imported] - Vibrio cholerae; E=6e-18 swissprot:P94170; CAH_ANASP CARBONIC ANHYDRASE PRECURSOR; E=4e-16 COG: VCA0274; COG3338 Carbonic anhydrase; E=6e-19 PFAM: PF00194; Eukaryotic-type carbonic anhy; E=4.1e-15; A-type carbonic anhydrase complement(2183505..2184137) Rhodopirellula baltica SH 1 1795195 NP_865994.1 CDS RB4269 NC_005027.1 2184201 2185049 R PMID: 1429718 PMID: 1346764 best DB hits: BLAST: swissprot:P80057; GSEP_BACLI GLUTAMYL ENDOPEPTIDASE PRECURSOR; E=9e-04 gb:AAB21460.1; glutamic acid specific endopeptidase, GSE=serine; E=9e-04; glutamyl endopeptidase complement(2184201..2185049) Rhodopirellula baltica SH 1 1793878 NP_865995.1 CDS RB4270 NC_005027.1 2185118 2187721 R PMID: 9163424 best DB hits: BLAST: swissprot:P55440; Y4FB_RHISN HYPOTHETICAL 73.7 KD PROTEIN Y4FB; E=8e-65 pir:D75375; conserved hypothetical protein - Deinococcus radiodurans; E=1e-41 pir:C83479; probable proteinase PA1327 [imported] - Pseudomonas; E=3e-31 COG: DR1599; COG0265 Trypsin-like serine proteases, typically; E=1e-42 PA1327; COG1864 DNA/RNA endonuclease G, NUC1; E=3e-32 PFAM: PF00089; Trypsin; E=0.24 PF01727; Domain of unknown function DUF; E=0.0043 PF00089; Trypsin; E=0.033; proteinase complement(2185118..2187721) Rhodopirellula baltica SH 1 1795495 NP_865996.1 CDS RB4271 NC_005027.1 2187652 2190558 R hypothetical protein complement(2187652..2190558) Rhodopirellula baltica SH 1 1796677 NP_865997.1 CDS RB4272 NC_005027.1 2190545 2191870 R hypothetical protein complement(2190545..2191870) Rhodopirellula baltica SH 1 1793275 NP_865998.1 CDS RB4273 NC_005027.1 2191875 2193431 R best DB hits: BLAST: ddbj:BAA77283.1; (AB013135) DyP [Galactomyces geotrichum]; E=4e-22 gb:AAB58908.1; (U77073) peroxidase [Polyporaceae sp.]; E=8e-22 pir:D75610; probable peroxidase - Deinococcus radiodurans (strain; E=8e-18 COG: DRA0145; COG2837 Predicted iron-dependent peroxidase; E=7e-19; peroxidase complement(2191875..2193431) Rhodopirellula baltica SH 1 1795382 NP_865999.1 CDS RB4275 NC_005027.1 2193465 2195783 R best DB hits: BLAST: pir:T36192; hypothetical protein SCE29.13c - Streptomyces coelicolor; E=3e-04; hypothetical protein complement(2193465..2195783) Rhodopirellula baltica SH 1 1795653 NP_866000.1 CDS RB4276 NC_005027.1 2195832 2195945 D hypothetical protein 2195832..2195945 Rhodopirellula baltica SH 1 1793848 NP_866001.1 CDS RB4277 NC_005027.1 2196029 2196151 D hypothetical protein 2196029..2196151 Rhodopirellula baltica SH 1 1795042 NP_866002.1 CDS RB4278 NC_005027.1 2196122 2198887 R PMID: 11266614 best DB hits: BLAST: embl:CAC01644.1; (AL391072) hypothetical protein SC9A4.17; E=4e-34 embl:CAB56738.1; (AL121600) membrane protein; E=1e-22 pir:D83260; hypothetical protein PA3080 [imported] - Pseudomonas; E=2e-08 PFAM: PF02012; BNR repeat; E=0.11; hypothetical protein complement(2196122..2198887) Rhodopirellula baltica SH 1 1794248 NP_866003.1 CDS RB4282 NC_005027.1 2199019 2199894 R PMID: 1701851 PMID: 7657606 best DB hits: BLAST: swissprot:P24347; MM11_HUMAN STROMELYSIN-3 PRECURSOR (MATRIX; E=0.042 embl:CAA40918.1; (X57766) stromelysin-3 precursor [Homo sapiens]; E=0.051 ref:XP_009873.1; matrix metalloproteinase 11 (stromelysin 3); E=0.051; matrix metalloproteinase-11 complement(2199019..2199894) Rhodopirellula baltica SH 1 1792573 NP_866004.1 CDS RB4283 NC_005027.1 2199963 2201462 R PMID: 20437337 best DB hits: BLAST: pir:B83347; hypothetical protein PA2392 [imported] - Pseudomonas; E=1e-50 PFAM: PF02022; Integrase Zinc binding domain; E=0.25; hypothetical protein complement(2199963..2201462) Rhodopirellula baltica SH 1 1794426 NP_866005.1 CDS RB4284 NC_005027.1 2201461 2201634 D hypothetical protein 2201461..2201634 Rhodopirellula baltica SH 1 1790345 NP_866006.1 CDS RB4285 NC_005027.1 2201611 2204136 R hypothetical protein complement(2201611..2204136) Rhodopirellula baltica SH 1 1792169 NP_866007.1 CDS RB4286 NC_005027.1 2204140 2204865 R PMID: 20437337 best DB hits: BLAST: pir:F83498; hypothetical protein PA1166 [imported] - Pseudomonas; E=0.035 COG: PA1166; COG0412 Dienelactone hydrolase and related enzymes; E=0.003 PFAM: PF01738; Dienelactone hydrolase; E=0.0023; hypothetical protein complement(2204140..2204865) Rhodopirellula baltica SH 1 1794218 NP_866008.1 CDS RB4288 NC_005027.1 2204880 2206004 R best DB hits: BLAST: gb:AAG38844.1; (AY010120) reductasehalogenase; E=1e-11 pir:T30590; alkylhalidase homolog - Amycolatopsis orientalis -----; E=2e-08 pir:T34627; probable electron transfer oxidoreductase - Streptomyces; E=2e-06 COG: Rv1751; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related; E=8e-05 Ta0326; COG0644 Dehydrogenases (flavoproteins); E=0.002 BH1851; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and; E=0.002 PFAM: PF01134; Glucose inhibited division prot; E=0.11 PF00732; GMC oxidoreductases; E=0.0013 PF01266; D-amino acid oxidase; E=0.0085; alkylhalidase-like protein complement(2204880..2206004) Rhodopirellula baltica SH 1 1793934 NP_866009.1 CDS RB4289 NC_005027.1 2206010 2207593 R PMID: 11259647 best DB hits: BLAST: swissprot:O59930; LEU3_PHACH 3-ISOPROPYLMALATE DEHYDROGENASE; E=0.38; 3-isopropylmalate dehydrogenase complement(2206010..2207593) Rhodopirellula baltica SH 1 1793218 NP_866010.1 CDS RB4292 NC_005027.1 2207648 2210527 R best DB hits: BLAST: pir:A58519; hypothetical 345 protein - Streptomyces coelicolor; E=3e-57 embl:CAC16730.1; (AL450289) conserved hypothetical protein; E=3e-50 gb:AAC59865.1; (U37373) up-regulated by thyroid hormone in; E=1e-44 COG: slr1608; COG2133 Glucose/sorbosone dehydrogenases; E=2e-16; hypothetical protein complement(2207648..2210527) Rhodopirellula baltica SH 1 1796731 NP_866011.1 CDS RB4293 NC_005027.1 2210560 2212074 R PMID: 9510026 best DB hits: BLAST: gb:AAB92243.1; (AF035381) ovoperoxidase [Lytechinus variegatus]; E=4e-08 pir:T24502; hypothetical protein T06D8.10 - Caenorhabditis elegans; E=4e-07 gb:AAF53674.2; (AE003659) CG10211 gene product [Drosophila; E=2e-06; ovoperoxidase complement(2210560..2212074) Rhodopirellula baltica SH 1 1795140 NP_866012.1 CDS RB4294 NC_005027.1 2212149 2213069 R PMID: 10910347 PMID: 8325504 best DB hits: BLAST: pir:C82841; cysteine proteinase XF0156 [imported] - Xylella; E=1e-13 embl:CAC18648.1; (AJ302013) cathepsin B-like cysteine protease 3; E=0.006 pir:H71456; probable pyrolysin (EC 3.4.-.-) homolog PH0310; E=0.086 PFAM: PF00112; Papain family cysteine protease; E=0.019; cysteine proteinase complement(2212149..2213069) Rhodopirellula baltica SH 1 1792185 NP_866013.1 CDS RB4296 NC_005027.1 2213209 2213931 R hypothetical protein complement(2213209..2213931) Rhodopirellula baltica SH 1 1792735 NP_866014.1 CDS RB4297 NC_005027.1 2213903 2214127 D hypothetical protein 2213903..2214127 Rhodopirellula baltica SH 1 1791302 NP_866015.1 CDS RB4298 NC_005027.1 2214175 2214720 R hypothetical protein complement(2214175..2214720) Rhodopirellula baltica SH 1 1795358 NP_866016.1 CDS RB4299 NC_005027.1 2214533 2214823 D PMID: 11756688 best DB hits: BLAST: gb:AAG58100.1; AE005527_3 (AE005527) unknown protein encoded by; E=0.003 gb:AAG53987.1; AF327445_1 (AF327445) transposase A; E=0.011 gb:AAF28119.1; AF153317_15 (AF153317) InsA [Shigella; E=0.026 PFAM: PF01381; Helix-turn-helix; E=0.53 PF01527; Transposase; E=1.5e-15; transposase 2214533..2214823 Rhodopirellula baltica SH 1 1793490 NP_866017.1 CDS RB4300 NC_005027.1 2214826 2215704 D PMID: 10594830 best DB hits: BLAST: gb:AAA88919.1; (U13013) ORFB [Leptospira interrogans]; E=3e-47 gb:AAA88916.1; (U13012) ORFB [Leptospira interrogans]; E=1e-46 gb:AAC05649.1; (AF038931) probable transposase-related protein; E=1e-45 COG: DRB0019.2; COG2801 transposase; E=1e-35 PFAM: PF00665; Integrase core domain; E=4.8e-40; hypothetical protein 2214826..2215704 Rhodopirellula baltica SH 1 1790125 NP_866018.1 CDS RB4301 NC_005027.1 2215750 2216085 R hypothetical protein complement(2215750..2216085) Rhodopirellula baltica SH 1 1791482 NP_866019.1 CDS RB4302 NC_005027.1 2216079 2216627 D hypothetical protein 2216079..2216627 Rhodopirellula baltica SH 1 1794662 NP_866020.1 CDS RB4303 NC_005027.1 2216575 2217969 D PMID: 11016950 best DB hits: BLAST: gb:AAG18661.1; (AE004971) Vng0021h [Halobacterium sp. NRC-1]; E=8e-22 gb:AAG18694.1; (AE004974) Vng0056h [Halobacterium sp. NRC-1]; E=8e-20 pir:T44318; transposase homolog [imported] - Vibrio cholerae -----; E=4e-15; transposase 2216575..2217969 Rhodopirellula baltica SH 1 1792098 NP_866021.1 CDS RB4304 NC_005027.1 2218057 2218530 R hypothetical protein complement(2218057..2218530) Rhodopirellula baltica SH 1 1790880 NP_866022.1 CDS RB4305 NC_005027.1 2218595 2219737 R PMID: 9371463 PMID: 10783239 best DB hits: BLAST: pir:F69192; conserved hypothetical protein MTH695 - Methanobacterium; E=2e-09 pir:B75516; conserved hypothetical protein - Deinococcus radiodurans; E=7e-04 pir:H82146; conserved hypothetical protein VC1882 [imported] -; E=0.007 COG: MTH695; COG0577 Predicted permease; E=2e-10 PFAM: PF02687; Predicted permease; E=1.5e-21; hypothetical protein complement(2218595..2219737) Rhodopirellula baltica SH 1 1794115 NP_866023.1 CDS RB4306 NC_005027.1 2219834 2221207 R PMID: 11292750 best DB hits: BLAST: swissprot:P03835; YI41_ECOLI INSERTION ELEMENT IS4 HYPOTHETICAL; E=0.030 embl:CAA57483.1; (X81894) ORF [Enterobacter agglomerans]; E=0.064 COG: yi41; COG3385 Predicted transposase; E=0.003; transposase complement(2219834..2221207) Rhodopirellula baltica SH 1 1794771 NP_866024.1 CDS RB4308 NC_005027.1 2221222 2221461 R hypothetical protein complement(2221222..2221461) Rhodopirellula baltica SH 1 1794171 NP_866025.1 CDS RB4309 NC_005027.1 2221424 2222125 R PMID: 3288195 PMID: 3762695 best DB hits: BLAST: embl:CAA11724.1; (AJ223978) ABC transporter, YvrO; E=7e-48 gb:AAB89781.1; (AE001001) ABC transporter ATP-binding protein; E=4e-47 embl:CAC21614.1; (AL512667) ABC transporter ATP-binding; E=6e-47 COG: AF1469; COG1136 ABC-type (unclassified) transport system, ATPase; E=4e-48 PFAM: PF00005; ABC transporter; E=1.7e-57; ABC transporter ATP-binding protein complement(2221424..2222125) Rhodopirellula baltica SH 1 1793364 NP_866026.1 CDS RB4310 NC_005027.1 2222125 2223684 R PMID: 9301333 PMID: 2249654 best DB hits: BLAST: swissprot:P32716; YJCR_ECOLI HYPOTHETICAL 36.9 KDA PROTEIN IN; E=3e-04 gb:AAG59280.1; AE005641_5 (AE005641) membrane protein; E=4e-04 pir:S76813; hypothetical protein sll1481 - Synechocystis sp. (strain; E=0.002 COG: yjcR; COG1566 Multidrug resistance efflux pump; E=2e-05 sll1481; COG0845 Membrane-fusion protein; E=2e-04 PA5159; COG1566 Multidrug resistance efflux pump; E=4e-04 PFAM: PF02017; CIDE-N domain; E=0.19 PF00364; Biotin-requiring enzyme; E=0.018; hypothetical protein complement(2222125..2223684) Rhodopirellula baltica SH 1 1790080 NP_866027.1 CDS RB4311 NC_005027.1 2223687 2224205 R signal peptide complement(2223687..2224205) Rhodopirellula baltica SH 1 1791675 NP_866028.1 CDS RB4314 NC_005027.1 2224235 2225476 R PMID: 12024217 best DB hits: BLAST: pir:F69192; conserved hypothetical protein MTH695 - Methanobacterium; E=0.005 COG: MTH695; COG0577 Predicted permease; E=5e-04 PFAM: PF02687; Predicted permease; E=1.4e-20; hypothetical protein complement(2224235..2225476) Rhodopirellula baltica SH 1 1790398 NP_866029.1 CDS RB4317 NC_005027.1 2225445 2225828 R signal peptide complement(2225445..2225828) Rhodopirellula baltica SH 1 1792811 NP_866030.1 CDS RB4320 NC_005027.1 2226114 2226611 D best DB hits: BLAST: gb:AAF50472.1; (AE003556) CG7986 gene product [alt 2] [Drosophila; E=0.38; hypothetical protein 2226114..2226611 Rhodopirellula baltica SH 1 1794466 NP_866031.1 CDS RB4322 NC_005027.1 2226866 2228239 D PMID: 11292750 best DB hits: BLAST: swissprot:P03835; YI41_ECOLI INSERTION ELEMENT IS4 HYPOTHETICAL; E=0.030 embl:CAA57483.1; (X81894) ORF [Enterobacter agglomerans]; E=0.064 COG: yi41; COG3385 Predicted transposase; E=0.003; transposase 2226866..2228239 Rhodopirellula baltica SH 1 1795414 NP_866032.1 CDS RB4324 NC_005027.1 2228307 2228504 R hypothetical protein complement(2228307..2228504) Rhodopirellula baltica SH 1 1796293 NP_866033.1 CDS RB4325 NC_005027.1 2228477 2228623 D hypothetical protein 2228477..2228623 Rhodopirellula baltica SH 1 1790404 NP_866034.1 CDS RB4327 NC_005027.1 2228606 2230546 R PMID: 9661020 best DB hits: BLAST: gb:AAG27731.1; AF312031_1 (AF312031) multi-drug efflux transporter; E=8e-12 pir:B83476; probable transporter PA1361 [imported] - Pseudomonas; E=1e-11 pir:D81950; probable transmembrane efflux protein NMA1022 [imported]; E=8e-10 COG: PA1361; COG0534 Na+-driven multidrug efflux pump; E=1e-12 PFAM: PF01554; Uncharacterized membrane protein fam; E=0.0072; multidrug ABC transporter complement(2228606..2230546) Rhodopirellula baltica SH 1 1793484 NP_866035.1 CDS RB4333 NC_005027.1 2230615 2231700 D best DB hits: BLAST: pir:S75877; hypothetical protein slr1166 - Synechocystis sp. (strain; E=1e-14 pir:A75033; probable hexosyltransferase (EC 2.4.1.-) PAB0827; E=2e-09 pir:D72511; probable hexosyltransferase (EC 2.4.1.-) APE2066; E=5e-09 COG: slr1166; COG0438 Predicted glycosyltransferases; E=1e-15 PAB2292; COG0297 Glycogen synthase; E=4e-05 BH1683; COG0438 Predicted glycosyltransferases; E=5e-05 PFAM: PF00534; Glycosyl transferases group 1; E=2.1e-12; galactosyltransferase 2230615..2231700 Rhodopirellula baltica SH 1 1792797 NP_866036.1 CDS RB4336 NC_005027.1 2231697 2232815 D hypothetical protein 2231697..2232815 Rhodopirellula baltica SH 1 1795361 NP_866037.1 CDS RB4337 NC_005027.1 2232812 2233672 D best DB hits: BLAST: swissprot:P39614; YWDF_BACSU HYPOTHETICAL 30.6 KDA PROTEIN IN; E=0.80 PFAM: PF00535; Glycosyl transferase; E=4.7e-07; glycosyl transferase 2232812..2233672 Rhodopirellula baltica SH 1 1793425 NP_866038.1 CDS RB4338 NC_005027.1 2233636 2233809 R hypothetical protein complement(2233636..2233809) Rhodopirellula baltica SH 1 1794914 NP_866039.1 CDS RB4340 NC_005027.1 2233917 2234846 R PMID: 11759840 best DB hits: BLAST: embl:CAB93418.1; (AL357524) transposase [Streptomyces; E=0.60; transposase complement(2233917..2234846) Rhodopirellula baltica SH 1 1797001 NP_866040.1 CDS RB4341 NC_005027.1 2234849 2235178 D hypothetical protein 2234849..2235178 Rhodopirellula baltica SH 1 1792279 NP_866041.1 CDS RB4343 NC_005027.1 2235163 2235597 R hypothetical protein complement(2235163..2235597) Rhodopirellula baltica SH 1 1792344 NP_866042.1 CDS RB4347 NC_005027.1 2235735 2236205 D best DB hits: BLAST: pir:A83374; hypothetical protein PA2169 [imported] - Pseudomonas; E=6e-14; hypothetical protein 2235735..2236205 Rhodopirellula baltica SH 1 1797002 NP_866043.1 CDS RB4348 NC_005027.1 2236190 2236372 R hypothetical protein complement(2236190..2236372) Rhodopirellula baltica SH 1 1792286 NP_866044.1 CDS RB4349 NC_005027.1 2236216 2236377 R hypothetical protein complement(2236216..2236377) Rhodopirellula baltica SH 1 1795642 NP_866045.1 CDS RB4350 NC_005027.1 2236345 2236698 D hypothetical protein 2236345..2236698 Rhodopirellula baltica SH 1 1796615 NP_866046.1 CDS RB4352 NC_005027.1 2236824 2237279 R hypothetical protein complement(2236824..2237279) Rhodopirellula baltica SH 1 1793402 NP_866047.1 CDS RB4353 NC_005027.1 2237331 2237771 R hypothetical protein complement(2237331..2237771) Rhodopirellula baltica SH 1 1792529 NP_866048.1 CDS RB4354 NC_005027.1 2237810 2238277 R hypothetical protein complement(2237810..2238277) Rhodopirellula baltica SH 1 1796903 NP_866049.1 CDS RB4356 NC_005027.1 2238462 2238932 R hypothetical protein complement(2238462..2238932) Rhodopirellula baltica SH 1 1791623 NP_866050.1 CDS RB4357 NC_005027.1 2238609 2239094 D hypothetical protein 2238609..2239094 Rhodopirellula baltica SH 1 1794748 NP_866051.1 CDS RB4358 NC_005027.1 2239103 2239474 R hypothetical protein complement(2239103..2239474) Rhodopirellula baltica SH 1 1795817 NP_866052.1 CDS RB4360 NC_005027.1 2239605 2240075 R hypothetical protein complement(2239605..2240075) Rhodopirellula baltica SH 1 1797074 NP_866053.1 CDS RB4361 NC_005027.1 2240090 2240206 R hypothetical protein complement(2240090..2240206) Rhodopirellula baltica SH 1 1790311 NP_866054.1 CDS RB4362 NC_005027.1 2240215 2240655 R hypothetical protein complement(2240215..2240655) Rhodopirellula baltica SH 1 1791008 NP_866055.1 CDS RB4364 NC_005027.1 2240636 2240812 R signal peptide complement(2240636..2240812) Rhodopirellula baltica SH 1 1795767 NP_866056.1 CDS RB4366 NC_005027.1 2240812 2241291 R PMID: 0009611225 PMID: 0010550052 best DB hits: BLAST: pir:E70385; conserved hypothetical protein aq_987 - Aquifex aeolicus; E=6e-09 pir:D72545; hypothetical protein APE1648 - Aeropyrum pernix (strain; E=4e-06 pir:H70517; probable lppD protein - Mycobacterium tuberculosis; E=1e-05 COG: aq_987; COG2110 Uncharacterized ACR related to the C-terminal domain; E=5e-10 APE1648; COG2110 Uncharacterized ACR related to the C-terminal; E=4e-07 ymdB; COG2110 Uncharacterized ACR related to the C-terminal domain; E=4e-06 PFAM: PF01661; Appr-1-p processing enzyme family; E=9.4e-18; hypothetical protein complement(2240812..2241291) Rhodopirellula baltica SH 1 1795500 NP_866057.1 CDS RB4369 NC_005027.1 2241431 2241850 R hypothetical protein complement(2241431..2241850) Rhodopirellula baltica SH 1 1796916 NP_866058.1 CDS RB4371 NC_005027.1 2241982 2242506 R hypothetical protein complement(2241982..2242506) Rhodopirellula baltica SH 1 1793303 NP_866059.1 CDS RB4373 NC_005027.1 2242534 2242863 R hypothetical protein complement(2242534..2242863) Rhodopirellula baltica SH 1 1791511 NP_866060.1 CDS RB4375 NC_005027.1 2242933 2252103 R best DB hits: BLAST: pir:S74915; extracellular nuclease - Synechocystis sp. (strain PCC; E=0.005 pir:C81675; polymorphic membrane protein BC family TC0694; E=0.10 COG: sll0656_1; COG3204 Uncharacterized BCR; E=0.002 PFAM: PF00404; Dockerin type I repeat; E=0.25; extracellular nuclease complement(2242933..2252103) Rhodopirellula baltica SH 1 1791820 NP_866061.1 CDS katA NC_005027.1 2252262 2253743 R PMID: 9358059 best DB hits: BLAST: gb:AAB26985.1; (L48340) catalase [Methylobacterium extorquens]; E=0.0 swissprot:Q59714; CATA_PSEPU CATALASE ----- gb: AAB88219.1; E=1e-152 swissprot:P48062; CATA_BORPE CATALASE ----- pir: S60757; E=1e-152 COG: PA4236; COG0753 Catalase; E=1e-153 PFAM: PF01334; Bacterioferritin; E=0.24 PF00199; Catalase; E=1.7e-261; catalase complement(2252262..2253743) Rhodopirellula baltica SH 1 1792386 NP_866062.1 CDS RB4377 NC_005027.1 2253830 2255017 R best DB hits: BLAST: embl:CAB83202.1; (AJ277117) membrane protein; E=4e-30 pir:H82825; transport protein XF0281 [imported] - Xylella fastidiosa; E=4e-28 swissprot:O51039; Y006_BORBU HYPOTHETICAL PROTEIN BB0006 -----; E=2e-13 COG: XF0281; COG0628 Predicted permease; E=4e-29 PFAM: PF01594; Domain of unknown function DUF20; E=2.7e-06; hypothetical protein complement(2253830..2255017) Rhodopirellula baltica SH 1 1795308 NP_866063.1 CDS RB4378 NC_005027.1 2255014 2255166 R hypothetical protein complement(2255014..2255166) Rhodopirellula baltica SH 1 1794894 NP_866064.1 CDS RB4381 NC_005027.1 2255442 2255621 R hypothetical protein complement(2255442..2255621) Rhodopirellula baltica SH 1 1794775 NP_866065.1 CDS RB4382 NC_005027.1 2255618 2257285 R PMID: 6350601 PMID: 89056708 PMID: 94237165 best DB hits: BLAST: swissprot:P55709; Y4YA_RHISN HYPOTHETICAL 49.9 KD PROTEIN Y4YA; E=3e-40 gb:AAG45731.1; AF229441_2 (AF229441) y4yA [Sinorhizobium fredii]; E=3e-40 gb:AAG45729.1; AF229440_2 (AF229440) y4yA [Sinorhizobium fredii]; E=3e-33 COG: aq_728; COG0019 Diaminopimelate decarboxylase; E=7e-08 PA4839; COG1166 Arginine decarboxylase (spermidine biosynthesis); E=5e-05 XF1116_2; COG0019 Diaminopimelate decarboxylase; E=5e-05 PFAM: PF02784; Pyridoxal-dependent decarboxyla; E=5.9e-08; diaminopimelate decarboxylase complement(2255618..2257285) Rhodopirellula baltica SH 1 1789927 NP_866066.1 CDS RB4383 NC_005027.1 2257131 2258768 R best DB hits: BLAST: gb:AAG56655.1; AE005390_2 (AE005390) orf, hypothetical protein; E=5e-05 swissprot:P77148; YDHS_ECOLI HYPOTHETICAL 60.8 KDA PROTEIN IN; E=1e-04; hypothetical protein complement(2257131..2258768) Rhodopirellula baltica SH 1 1792951 NP_866067.1 CDS RB4386 NC_005027.1 2258765 2259814 R PMID: 93345669 best DB hits: BLAST: swissprot:Q44004; CYSM_ALCEU CYSTEINE SYNTHASE (O-ACETYLSERINE; E=2e-35 pir:T43792; cysteine synthase (EC 4.2.99.8) cysK [similarity] -; E=1e-31 pir:H81161; probable cysteine synthase (EC 4.2.99.8) NMA0974; E=3e-31 COG: NMB0763; COG0031 Cysteine synthase; E=2e-32 PFAM: PF00291; Pyridoxal-phosphate dependent enzyme; E=9.2e-57; cysteine synthase complement(2258765..2259814) Rhodopirellula baltica SH 1 1793264 NP_866068.1 CDS RB4389 NC_005027.1 2259805 2260005 R hypothetical protein complement(2259805..2260005) Rhodopirellula baltica SH 1 1790382 NP_866069.1 CDS RB4390 NC_005027.1 2260002 2260859 R PMID: 9371463 best DB hits: BLAST: pir:H69043; conserved hypothetical protein MTH1330 -; E=0.004 swissprot:Q50500; YE63_METTH HYPOTHETICAL PROTEIN MTH1463 (ORF11); E=0.005 pir:A69088; conserved hypothetical protein MTH1653 -; E=0.010 COG: MTH1330; COG3271 Predicted double-glycine peptidase; E=4e-04; hypothetical protein complement(2260002..2260859) Rhodopirellula baltica SH 1 1790534 NP_866070.1 CDS RB4392 NC_005027.1 2260905 2261108 D hypothetical protein 2260905..2261108 Rhodopirellula baltica SH 1 1797105 NP_866071.1 CDS RB4393 NC_005027.1 2261154 2261375 D hypothetical protein 2261154..2261375 Rhodopirellula baltica SH 1 1793840 NP_866072.1 CDS RB4394 NC_005027.1 2261372 2261938 D PMID: 96196168 best DB hits: BLAST: pir:T34745; probable proteinase pfpI - Streptomyces coelicolor; E=6e-55 pir:F75423; proteinase I - Deinococcus radiodurans (strain R1); E=1e-50 pir:E83601; proteinase PfpI PA0355 [imported] - Pseudomonas; E=3e-40 COG: DR1199; COG0693 intracellular protease/amidase; E=1e-51 BH1980; COG0753 Catalase; E=4e-07 BB0621; COG0693 intracellular protease/amidase; E=4e-07 PFAM: PF00117; Glutamine amidotransferase class-I; E=0.13 PF01965; ThiJ/PfpI family; E=1.1e-61; proteinase I 2261372..2261938 Rhodopirellula baltica SH 1 1792288 NP_866073.1 CDS RB4395 NC_005027.1 2262023 2262535 D PMID: 8007818 best DB hits: BLAST: gb:AAB31024.1; (S71704) Mip=24 kda macrophage infectivity; E=2e-09 gb:AAG57782.1; AE005496_5 (AE005496) Z3974 gene product; E=4e-06 pir:E83611; conserved hypothetical protein PA0269 [imported] -; E=6e-06 COG: PA0269; COG2128 Uncharacterized ACR; E=6e-07; macrophage infectivity potentiator protein Mip 2262023..2262535 Rhodopirellula baltica SH 1 1793678 NP_866074.1 CDS RB4396 NC_005027.1 2262532 2263887 D PMID: 7559423 best DB hits: BLAST: swissprot:P48638; GSHR_ANASP GLUTATHIONE REDUCTASE (GR) (GRASE); E=7e-50 embl:CAA12270.1; (AJ224977) ORF 4 [Sphingomonas sp. RW5]; E=2e-49 gb:AAK04944.1; AE006318_7 (AE006318) glutathione reductase (EC; E=6e-49 COG: gor; COG1249 Dihydrolipoamide dehydrogenase/glutathione; E=4e-49 PFAM: PF00996; GDP dissociation inhibitor; E=0.34 PF00070; Pyridine nucleotide-disulphide; E=3.3e-62 PF02852; Pyridine nucleotide-disulphide; E=3.4e-06; glutathione reductase 2262532..2263887 Rhodopirellula baltica SH 1 1796170 NP_866075.1 CDS RB4397 NC_005027.1 2263976 2264143 D hypothetical protein 2263976..2264143 Rhodopirellula baltica SH 1 1791110 NP_866076.1 CDS RB4398 NC_005027.1 2264154 2264261 R hypothetical protein complement(2264154..2264261) Rhodopirellula baltica SH 1 1792095 NP_866077.1 CDS RB4399 NC_005027.1 2264251 2265237 R PMID: 7602590 best DB hits: BLAST: embl:CAB59716.1; (AL132707) zinc-binding oxidoreductase; E=3e-31 pir:T10203; hypothetical protein F25G13.100 - Arabidopsis thaliana; E=2e-28 embl:CAC14345.1; (AL445945) zinc-binding oxidoreductase; E=1e-26 COG: VC0552; COG0604 NADPH:quinone reductase and related Zn-dependent; E=2e-26 PFAM: PF00107; Zinc-binding dehydrogenases; E=5.2e-48; quinone oxidoreductase complement(2264251..2265237) Rhodopirellula baltica SH 1 1794492 NP_866078.1 CDS RB4400 NC_005027.1 2265206 2265382 R hypothetical protein complement(2265206..2265382) Rhodopirellula baltica SH 1 1791805 NP_866079.1 CDS RB4402 NC_005027.1 2265340 2265501 D hypothetical protein 2265340..2265501 Rhodopirellula baltica SH 1 1791755 NP_866080.1 CDS RB4404 NC_005027.1 2265539 2266447 D best DB hits: BLAST: swissprot:P40398; YHXD_BACSU HYPOTHETICAL OXIDOREDUCTASE IN; E=2e-67 swissprot:P80873; GS39_BACSU GENERAL STRESS PROTEIN 39 (GSP39); E=3e-65 gb:AAG02162.1; AF212041_18 (AF212041) ribitol dehydrogenase; E=8e-65 COG: BS_yhxD; COG1028 Dehydrogenases with different specificities; E=2e-68 BH1511; COG1028 Dehydrogenases with different specificities (related; E=1e-64 DRA0364; COG1028 Dehydrogenases with different specificities; E=1e-62 PFAM: PF00106; short chain dehydrogenase; E=8.7e-53 PF00678; Short chain dehydrogenase/reduct; E=5.5e-09; oxidoreductase YhxD 2265539..2266447 Rhodopirellula baltica SH 1 1791540 NP_866081.1 CDS RB4405 NC_005027.1 2266535 2266894 R best DB hits: BLAST: pir:T36457; probable DNA-binding protein - Streptomyces coelicolor; E=2e-25 embl:CAB89026.1; (AL353870) hypothetical protein SC6F7.18c.; E=0.002; DNA-binding protein complement(2266535..2266894) Rhodopirellula baltica SH 1 1795008 NP_866082.1 CDS RB4407 NC_005027.1 2266905 2267123 D hypothetical protein 2266905..2267123 Rhodopirellula baltica SH 1 1796474 NP_866083.1 CDS RB4408 NC_005027.1 2267081 2268175 R PMID: 8973648 PMID: 91255245 best DB hits: BLAST: swissprot:P74917; C552_THIFE CYTOCHROME C-552 PRECURSOR (C552); E=8e-11 pir:B83334; probable cytochrome c PA2482 [imported] - Pseudomonas; E=5e-10 pir:F81040; cytochrome C4 NMB1805 [imported] - Neisseria; E=8e-10 COG: PA2482; COG2863 Cytochrome c553; E=4e-11 VC1439; COG2010 Cytochrome c, mono- and diheme variants; E=0.002; cytochrome c-552 complement(2267081..2268175) Rhodopirellula baltica SH 1 1795831 NP_866084.1 CDS RB4410 NC_005027.1 2268218 2268889 R PMID: 11481431; signal peptide complement(2268218..2268889) Rhodopirellula baltica SH 1 1792645 NP_866085.1 CDS RB4414 NC_005027.1 2268889 2269314 R best DB hits: PFAM: PF01569; PAP2 superfamily; E=0.35; hypothetical protein complement(2268889..2269314) Rhodopirellula baltica SH 1 1793760 NP_866086.1 CDS RB4416 NC_005027.1 2269302 2271803 R PMID: 1847686 PMID: 94364936 PMID: 83257235 PMID: 88054981 best DB hits: BLAST: gb:AAD20227.1; (AF111945) quinol oxidase subunit I [Rhodobacter; E=1e-153 swissprot:P24010; COX1_BACSU CYTOCHROME C OXIDASE POLYPEPTIDE I; E=1e-102 pir:S14397; cytochrome-c oxidase (EC 1.9.3.1) chain I - Bacillus; E=1e-102 COG: BS_ctaD; COG0843 Heme/copper-type cytochrome/quinol oxidases,; E=1e-103 BH2614; COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit; E=1e-97 BS_qoxB; COG0843 Heme/copper-type cytochrome/quinol oxidases,; E=2e-90 PFAM: PF00115; Cytochrome C and Quinol oxida; E=2e-160; cytochrome c oxidase polypeptide I complement(2269302..2271803) Rhodopirellula baltica SH 1 1794976 NP_866087.1 CDS RB4417 NC_005027.1 2271800 2272906 R PMID: 89231697 PMID: 91161592 best DB hits: BLAST: pir:A23711; cytochrome-c oxidase (EC 1.9.3.1) chain IIc precursor -; E=3e-42 swissprot:Q04441; COX2_BACFI CYTOCHROME C OXIDASE POLYPEPTIDE II; E=5e-38 ddbj:BAB06334.1; (AP001516) cytochrome caa3 oxidase (subunit II); E=2e-35 COG: BH2615_1; COG1622 Heme/copper-type cytochrome/quinol oxidases,; E=2e-21 XF1390; COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit; E=1e-14 slr1136; COG1622 Heme/copper-type cytochrome/quinol oxidases,; E=3e-14 PFAM: PF00116; Cytochrome C oxidase subunit II,; E=6.3e-25 PF00034; Cytochrome c; E=7e-11; cytochrome-c oxidase chain II/c precursor complement(2271800..2272906) Rhodopirellula baltica SH 1 1795959 NP_866088.1 CDS RB4419 NC_005027.1 2272912 2273448 D best DB hits: BLAST: pir:G70340; Mg(2+) transport ATPase - Aquifex aeolicus ----- gb:; E=2e-10 gb:AAD43996.1; (U59485) attV [Agrobacterium tumefaciens]; E=1e-09 ddbj:BAB06944.1; (AP001518) magnesium (Mg2+) transporter; E=1e-09 COG: aq_447; COG1285 Uncharacterized membrane protein; E=2e-11 PFAM: PF02308; MgtC family; E=1.4e-20; magnesium ABC transporter ATPase 2272912..2273448 Rhodopirellula baltica SH 1 1796373 NP_866089.1 CDS RB4420 NC_005027.1 2273473 2274093 R best DB hits: BLAST: pir:B75253; DedA family protein - Deinococcus radiodurans (strain; E=2e-38 pir:S76640; hypothetical protein - Synechocystis sp. (strain PCC; E=1e-33 swissprot:Q48630; APL_LACLC ALKALINE PHOSPHATASE LIKE PROTEIN; E=1e-29 COG: DR2612; COG0586 Uncharacterized membrane-associated protein; E=2e-39 PFAM: PF00452; Apoptosis regulator proteins, Bcl-2; E=0.022 PF00597; DedA family; E=1.1e-09; DedA family protein complement(2273473..2274093) Rhodopirellula baltica SH 1 1794081 NP_866090.1 CDS RB4422 NC_005027.1 2274125 2274595 R PMID: 95214091 best DB hits: BLAST: pir:F82618; chemotaxis-related protein kinase XF1952 [imported] -; E=2e-09 gb:AAC25076.1; (AF044495) CheY homolog [Agrobacterium; E=5e-09 pir:S75938; chemotaxis protein cheA (EC 2.7.-.-) - Synechocystis sp.; E=6e-09 COG: sll0043_4; COG0784 CheY-like receiver domains; E=6e-10 CPn0586; COG2204 AAA superfamily ATPases with N-terminal receiver; E=8e-08 sll0039; COG0784 CheY-like receiver domains; E=8e-08 PFAM: PF00072; Response regulator receiver doma; E=8e-16; chemotaxis related cheY1 protein complement(2274125..2274595) Rhodopirellula baltica SH 1 1797061 NP_866091.1 CDS RB4423 NC_005027.1 2274588 2275085 R PMID: 92232718 PMID: 93155023 best DB hits: BLAST: pir:A83333; probable deaminase PA2499 [imported] - Pseudomonas; E=3e-13 embl:CAC18685.1; (AL451182) deaminase [Streptomyces; E=1e-12 embl:CAA07230.1; (AJ006764) deoxycytidylate deaminase; E=3e-12 COG: PA2499; COG0590 Cytosine/adenosine deaminases; E=3e-14 PFAM: PF00383; Cytidine and deoxycytidylate de; E=2.6e-19; cytidine and deoxycytidylate deaminase complement(2274588..2275085) Rhodopirellula baltica SH 1 1790958 NP_866092.1 CDS RB4425 NC_005027.1 2275100 2275483 D hypothetical protein 2275100..2275483 Rhodopirellula baltica SH 1 1792716 NP_866093.1 CDS RB4426 NC_005027.1 2275604 2275786 R best DB hits: BLAST: pir:A69202; conserved hypothetical protein MTH763 - Methanobacterium; E=0.79; hypothetical protein complement(2275604..2275786) Rhodopirellula baltica SH 1 1791277 NP_866094.1 CDS RB4427 NC_005027.1 2275637 2275903 D hypothetical protein 2275637..2275903 Rhodopirellula baltica SH 1 1795182 NP_866095.1 CDS RB4428 NC_005027.1 2275865 2275996 R hypothetical protein complement(2275865..2275996) Rhodopirellula baltica SH 1 1791311 NP_866096.1 CDS RB4429 NC_005027.1 2275996 2276265 D PMID: 11743193 best DB hits: BLAST: embl:CAC16998.1; (AL450350) hypothetical protein [Streptomyces; E=0.45; hypothetical protein 2275996..2276265 Rhodopirellula baltica SH 1 1796303 NP_866097.1 CDS RB4432 NC_005027.1 2276333 2277139 D best DB hits: BLAST: gb:AAG57269.1; AE005445_6 (AE005445) oxidoreductase; E=4e-41 swissprot:P33368; YOHF_ECOLI HYPOTHETICAL OXIDOREDUCTASE IN; E=8e-41 pir:G75333; 3-oxoacyl-acyl carrier protein reductase - Deinococcus; E=7e-33 COG: yohF; COG1028 Dehydrogenases with different specificities (related; E=8e-42 BS_ycdF; COG1028 Dehydrogenases with different specificities; E=2e-31 TM1724; COG1028 Dehydrogenases with different specificities (related; E=4e-25 PFAM: PF00106; short chain dehydrogenase; E=1.7e-42 PF00678; Short chain dehydrogenase/reduct; E=1.2e-07; acetoin dehydrogenase 2276333..2277139 Rhodopirellula baltica SH 1 1793975 NP_866098.1 CDS RB4433 NC_005027.1 2277208 2277696 D PMID: 1340475 PMID: 8021175 best DB hits: BLAST: pir:T35689; hypothetical protein SC7C7.11 SC7C7.11 - Streptomyces; E=5e-30 swissprot:Q47953; FTPA_HAEDU FINE TANGLED PILI MAJOR SUBUNIT (24; E=1e-17 embl:CAB61290.1; (AL132991) DNA-binding protein; E=3e-16 COG: dps; COG0783 Starvation-inducible DNA-binding protein; E=1e-14 PFAM: PF02047; Dps protein family; E=4.1e-45; DNA protection during starvation protein 2277208..2277696 Rhodopirellula baltica SH 1 1797018 NP_866099.1 CDS RB4436 NC_005027.1 2277820 2278092 D signal peptide 2277820..2278092 Rhodopirellula baltica SH 1 1795907 NP_866100.1 CDS RB4438 NC_005027.1 2278247 2278729 D PMID: 8012595 best DB hits: BLAST: pir:D75431; probable general stress protein 26 - Deinococcus; E=4e-18 pir:D75427; hypothetical protein - Deinococcus radiodurans (strain; E=2e-07 swissprot:P80238; GS26_BACSU GENERAL STRESS PROTEIN 26 (GSP26); E=0.10; general stress protein 26 2278247..2278729 Rhodopirellula baltica SH 1 1792008 NP_866101.1 CDS RB4440 NC_005027.1 2278882 2279925 D best DB hits: BLAST: embl:CAC01649.1; (AL391072) conserved hypothetical protein; E=1e-06 pir:B83370; conserved hypothetical protein PA2211 [imported] -; E=5e-04 swissprot:P55567; Y4MH_RHISN HYPOTHETICAL 33.9 KD PROTEIN Y4MH; E=5e-04; hypothetical protein 2278882..2279925 Rhodopirellula baltica SH 1 1794791 NP_866102.1 CDS RB4443 NC_005027.1 2279973 2280143 R hypothetical protein complement(2279973..2280143) Rhodopirellula baltica SH 1 1791854 NP_866103.1 CDS RB4444 NC_005027.1 2280283 2282394 D PMID: 8843436 best DB hits: BLAST: embl:CAB56147.1; (AL117669) hypothetical protein [Streptomyces; E=3e-07 embl:CAB55704.1; (AL117387) secreted protein; E=0.014; hypothetical protein 2280283..2282394 Rhodopirellula baltica SH 1 1797026 NP_866104.1 CDS RB4448 NC_005027.1 2282361 2282657 R hypothetical protein complement(2282361..2282657) Rhodopirellula baltica SH 1 1795372 NP_866105.1 CDS RB4451 NC_005027.1 2282709 2282987 R hypothetical protein complement(2282709..2282987) Rhodopirellula baltica SH 1 1791803 NP_866106.1 CDS RB4452 NC_005027.1 2282954 2283214 D hypothetical protein 2282954..2283214 Rhodopirellula baltica SH 1 1791777 NP_866107.1 CDS FliC NC_005027.1 2283201 2285420 D PMID: 2498283 PMID: 2498284 PMID: 814121 best DB hits: BLAST: gb:AAC27808.1; (AF069392) polar flagellin [Vibrio; E=2e-17 gb:AAC01555.1; (AF007122) flagellin [Vibrio cholerae]; E=4e-17 pir:C82112; flagellin FlaE VC2144 [imported] - Vibrio cholerae; E=4e-17 COG: VC2144; COG1344 Flagellin and related hook-associated proteins; E=4e-18 PFAM: PF00669; Bacterial flagellin N-terminus; E=1e-26 PF00700; Bacterial flagellin C-terminus; E=1.2e-12; flagellin 2283201..2285420 Rhodopirellula baltica SH 1 1790396 NP_866108.1 CDS RB4455 NC_005027.1 2285426 2285650 R hypothetical protein complement(2285426..2285650) Rhodopirellula baltica SH 1 1791521 NP_866109.1 CDS RB4456 NC_005027.1 2285620 2285814 D hypothetical protein 2285620..2285814 Rhodopirellula baltica SH 1 1795591 NP_866110.1 CDS RB4457 NC_005027.1 2285628 2285924 D hypothetical protein 2285628..2285924 Rhodopirellula baltica SH 1 1796083 NP_866111.1 CDS RB4458 NC_005027.1 2286061 2287089 R PMID: 8905231 best DB hits: BLAST: pir:S76294; hypothetical protein - Synechocystis sp. (strain PCC; E=6e-19 gb:AAD00285.1; (U78604) membrane protein [Streptococcus; E=2e-12 gb:AAK05280.1; AE006350_7 (AE006350) permease [Lactococcus lactis; E=4e-10 COG: slr0784; COG0628 Predicted permease; E=5e-20 PFAM: PF01594; Domain of unknown function DUF20; E=1.9e-45; hypothetical protein complement(2286061..2287089) Rhodopirellula baltica SH 1 1797055 NP_866112.1 CDS RB4459 NC_005027.1 2287089 2288477 R PMID: 98344137 best DB hits: BLAST: swissprot:P11666; YGGB_ECOLI HYPOTHETICAL 30.9 KDA PROTEIN IN; E=5e-27 pir:D75011; hypothetical protein PAB1281 - Pyrococcus abyssi (strain; E=1e-22 pir:E71140; hypothetical protein PH0336 - Pyrococcus horikoshii; E=2e-22 COG: yggB; COG0668 Small-conductance mechanosensitive channel; E=5e-28 PA5022; COG3264 Small-conductance mechanosensitive channel; E=5e-13 PFAM: PF00924; Uncharacterized protein family; E=4.4e-52; hypothetical protein complement(2287089..2288477) Rhodopirellula baltica SH 1 1792774 NP_866113.1 CDS RB4460 NC_005027.1 2288428 2289696 R PMID: 9634230 best DB hits: BLAST: swissprot:Q10616; YC90_MYCTU HYPOTHETICAL 56.0 KDA PROTEIN RV1290C; E=4e-35 pir:T35776; hypothetical protein SC8A6.09c SC8A6.09 - Streptomyces; E=1e-23 gb:AAK03181.1; (AE006150) unknown [Pasteurella multocida]; E=1e-11; hypothetical protein complement(2288428..2289696) Rhodopirellula baltica SH 1 1796607 NP_866114.1 CDS RB4461 NC_005027.1 2289693 2291114 R PMID: 9679194 best DB hits: BLAST: pir:H82702; small conductance mechanosensitive ion channel XF1258; E=2e-17 pir:E71140; hypothetical protein PH0336 - Pyrococcus horikoshii; E=1e-15 pir:B83096; conserved hypothetical protein PA4394 [imported] -; E=2e-15 COG: XF1258; COG0668 Small-conductance mechanosensitive channel; E=2e-18 HI0195.1; COG3264 Small-conductance mechanosensitive channel; E=1e-09 PFAM: PF00924; Uncharacterized protein family UPF00; E=6.2e-44; hypothetical protein complement(2289693..2291114) Rhodopirellula baltica SH 1 1797065 NP_866115.1 CDS RB4462 NC_005027.1 2291005 2291400 R hypothetical protein complement(2291005..2291400) Rhodopirellula baltica SH 1 1794891 NP_866116.1 CDS RB4464 NC_005027.1 2291404 2292075 R signal peptide complement(2291404..2292075) Rhodopirellula baltica SH 1 1795759 NP_866117.1 CDS RB4465 NC_005027.1 2292091 2292264 R hypothetical protein complement(2292091..2292264) Rhodopirellula baltica SH 1 1791781 NP_866118.1 CDS RB4466 NC_005027.1 2292230 2292367 D hypothetical protein 2292230..2292367 Rhodopirellula baltica SH 1 1796690 NP_866119.1 CDS RB4467 NC_005027.1 2292401 2293501 D PMID: 9278503 best DB hits: BLAST: pir:F82056; conserved hypothetical protein VC2610 [imported] -; E=3e-26 pir:F83600; conserved hypothetical protein PA0368 [imported] -; E=5e-24 swissprot:P45524; YHET_ECOLI HYPOTHETICAL 38.5 KD PROTEIN IN; E=2e-23 COG: VC2610; COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold; E=3e-27 YMR210w; COG0429 Predicted hydrolase of the alpha/beta-hydrolase; E=1e-23 PFAM: PF00561; alpha/beta hydrolase fold; E=3.9e-06; hypothetical protein 2292401..2293501 Rhodopirellula baltica SH 1 1790632 NP_866120.1 CDS RB4468 NC_005027.1 2293616 2294104 R hypothetical protein complement(2293616..2294104) Rhodopirellula baltica SH 1 1795314 NP_866121.1 CDS RB4470 NC_005027.1 2294167 2294676 R signal peptide complement(2294167..2294676) Rhodopirellula baltica SH 1 1790254 NP_866122.1 CDS RB4473 NC_005027.1 2294808 2294981 R hypothetical protein complement(2294808..2294981) Rhodopirellula baltica SH 1 1793751 NP_866123.1 CDS RB4474 NC_005027.1 2295048 2295554 D PMID: 8265357 best DB hits: BLAST: pir:F83054; conserved hypothetical protein PA4738 [imported] -; E=3e-06 swissprot:P32691; YJBJ_ECOLI PROTEIN YJBJ ----- pir: D65212; E=2e-05 embl:CAB98302.2; (AL390114) probable 8.3 Kd protein in dinf-qor; E=0.35 COG: PA4738; COG3237 Uncharacterized BCR; E=3e-07; hypothetical protein 2295048..2295554 Rhodopirellula baltica SH 1 1795610 NP_866124.1 CDS RB4476 NC_005027.1 2295557 2295943 D hypothetical protein 2295557..2295943 Rhodopirellula baltica SH 1 1790057 NP_866125.1 CDS RB4477 NC_005027.1 2295940 2296149 D hypothetical protein 2295940..2296149 Rhodopirellula baltica SH 1 1796136 NP_866126.1 CDS RB4478 NC_005027.1 2296122 2296640 D signal peptide 2296122..2296640 Rhodopirellula baltica SH 1 1790094 NP_866127.1 CDS RB4480 NC_005027.1 2296646 2296915 D hypothetical protein 2296646..2296915 Rhodopirellula baltica SH 1 1789958 NP_866128.1 CDS RB4482 NC_005027.1 2296905 2297240 R hypothetical protein complement(2296905..2297240) Rhodopirellula baltica SH 1 1794821 NP_866129.1 CDS RB4484 NC_005027.1 2297267 2298565 D PMID: 7792599 PMID: 7674922 best DB hits: BLAST: swissprot:P54984; Y100_SYNY3 HYPOTHETICAL 42.7 KD PROTEIN SLL0100; E=2e-59 gb:AAF26972.1; AC018363_17 (AC018363) IAA-amino acid hydrolase; E=1e-51 swissprot:P54968; ILR1_ARATH IAA-AMINO ACID HYDROLASE 1 -----; E=2e-51 COG: sll0100; COG1473 Metal-dependent amidohydrolases/aminoacylases; E=2e-60 PFAM: PF01546; Peptidase M20/M25/M40; E=4.9e-32; IAA-amino acid hydrolase 1 2297267..2298565 Rhodopirellula baltica SH 1 1791071 NP_866130.1 CDS RB4485 NC_005027.1 2298652 2299770 D ATP-dependent carboxylate-amine ligase; carboxylate-amine ligase 2298652..2299770 Rhodopirellula baltica SH 1 1792321 NP_866131.1 CDS ntrC NC_005027.1 2299859 2301403 D PMID: 7553451 best DB hits: BLAST: swissprot:Q06065; ATOC_ECOLI ACETOACETATE METABOLISM REGULATORY; E=1e-86 swissprot:P45671; NTRC_AZOBR NITROGEN ASSIMILATION REGULATORY; E=4e-84 pir:S42745; nitrogen assimilation regulatory protein ntrC -; E=5e-84 COG: atoC; COG2204 AAA superfamily ATPases with N-terminal receiver; E=1e-87 PFAM: PF00072; Response regulator receiver dom; E=2e-29 PF00004; ATPase associated with v; E=0.34 PF00158; Sigma-54 interaction domain; E=5.2e-129; nitrogen assimilation regulatory protein 2299859..2301403 Rhodopirellula baltica SH 1 1790555 NP_866132.1 CDS RB4489 NC_005027.1 2301387 2301905 D hypothetical protein 2301387..2301905 Rhodopirellula baltica SH 1 1792726 NP_866133.1 CDS RB4492 NC_005027.1 2301833 2302138 R hypothetical protein complement(2301833..2302138) Rhodopirellula baltica SH 1 1791766 NP_866134.1 CDS RB4493 NC_005027.1 2302123 2302374 R hypothetical protein complement(2302123..2302374) Rhodopirellula baltica SH 1 1792902 NP_866135.1 CDS RB4497 NC_005027.1 2302950 2303099 D hypothetical protein 2302950..2303099 Rhodopirellula baltica SH 1 1794577 NP_866136.1 CDS RB4498 NC_005027.1 2303250 2303522 R hypothetical protein complement(2303250..2303522) Rhodopirellula baltica SH 1 1793784 NP_866137.1 CDS RB4499 NC_005027.1 2303519 2303764 R hypothetical protein complement(2303519..2303764) Rhodopirellula baltica SH 1 1793429 NP_866138.1 CDS RB4500 NC_005027.1 2303645 2303908 D best DB hits: BLAST: swissprot:AHNK_HUMAN_2; [Segment 2 of 2] NEUROBLAST DIFFERENTIATION; E=0.006 pir:A45259; desmoyokin - human (fragments); E=0.018; hypothetical protein 2303645..2303908 Rhodopirellula baltica SH 1 1791925 NP_866139.1 CDS RB4502 NC_005027.1 2303992 2304171 D best DB hits: BLAST: pir:T26079; hypothetical protein W02A2.5 - Caenorhabditis elegans; E=0.21 PFAM: PF01679; Uncharacterized protein family UPF00; E=2.1e-11; hypothetical protein 2303992..2304171 Rhodopirellula baltica SH 1 1790588 NP_866140.1 CDS RB4504 NC_005027.1 2304293 2304838 D best DB hits: BLAST: ddbj:BAB06016.1; (AP001515) BH2297~unknown conserved protein; E=3e-13 ddbj:BAB05689.1; (AP001513) BH1970~unknown conserved protein; E=2e-10 pir:A69782; probable membrane protein ydfS - Bacillus subtilis; E=6e-08 COG: BH2297; COG2323 Predicted membrane protein; E=3e-14; hypothetical protein 2304293..2304838 Rhodopirellula baltica SH 1 1791962 NP_866141.1 CDS RB4505 NC_005027.1 2304919 2306070 D PMID: 11248100 best DB hits: BLAST: gb:AAK03159.1; (AE006148) unknown [Pasteurella multocida]; E=3e-53 embl:CAC10327.1; (AL442629) integral membrane protein; E=0.020 PFAM: PF01260; AP endonuclease 1; E=0.4; hypothetical protein 2304919..2306070 Rhodopirellula baltica SH 1 1796304 NP_866142.1 CDS RB4506 NC_005027.1 2306074 2306865 D PMID: 20317087 best DB hits: BLAST: pir:D83165; conserved hypothetical protein PA3857 [imported] -; E=6e-19 pir:A70131; phosphatidyltransferase homolog - Lyme disease; E=2e-12 gb:AAF27310.1; AF155772_4 (AF155772) phosphatidylcholine synthase; E=4e-11 COG: BB0249; COG1183 Phosphatidylserine synthase; E=2e-13; phosphatidylcholine synthase 2306074..2306865 Rhodopirellula baltica SH 1 1797039 NP_866143.1 CDS cheY NC_005027.1 2306813 2307469 D PMID: 99453779 best DB hits: BLAST: pir:S76044; hypothetical protein slr0322 - Synechocystis sp. (strain; E=6e-10 pir:F70801; hypothetical protein Rv3765c - Mycobacterium; E=3e-09 embl:CAB54568.1; (AJ006392) response regulator [Streptococcus; E=4e-09 COG: slr0322_2; COG0784 CheY-like receiver domains; E=6e-11 Rv3765c; COG0745 Response regulators consisting of a CheY-like; E=3e-10 DRA0355_2; COG0784 CheY-like receiver domains; E=2e-09 PFAM: PF00072; Response regulator receiver doma; E=1.1e-14; chemotaxis response regulator cheYI 2306813..2307469 Rhodopirellula baltica SH 1 1794236 NP_866144.1 CDS RB4510 NC_005027.1 2307508 2307657 R hypothetical protein complement(2307508..2307657) Rhodopirellula baltica SH 1 1793126 NP_866145.1 CDS RB4511 NC_005027.1 2307911 2312824 D PMID: 8905231 best DB hits: BLAST: swissprot:Q02998; YH19_RHOCA HYPOTHETICAL 104.1 KD PROTEIN IN HYPE; E=1e-120 gb:AAA98755.1; (L29642) methyltransferase [Pseudomonas; E=5e-58 pir:E82198; sensor histidine kinaseresponse regulator VC1445; E=3e-49 COG: VC1349_2; COG0642 Sensory transduction histidine kinases; E=4e-38 BH1655; COG1352 Methylase of chemotaxis methyl-accepting proteins; E=6e-31 arcB_1; COG0642 Sensory transduction histidine kinases; E=4e-30 PFAM: PF01339; CheB methylesterase; E=3.9e-06 PF01303; Egg lysin (Sperm-lysin); E=0.017 PF01339; CheB methylesterase; E=0.076; sensory transduction histidine kinase 2307911..2312824 Rhodopirellula baltica SH 1 1795739 NP_866146.1 CDS RB4512 NC_005027.1 2312848 2314071 D best DB hits: BLAST: pir:G75425; conserved hypothetical protein - Deinococcus radiodurans; E=5e-44 embl:CAA59823.1; (X85811) ORF N2219 [Saccharomyces cerevisiae]; E=4e-11 embl:CAA95970.1; (Z71370) ORF YNL094w [Saccharomyces cerevisiae]; E=4e-11; hypothetical protein 2312848..2314071 Rhodopirellula baltica SH 1 1796656 NP_866147.1 CDS RB4513 NC_005027.1 2314118 2315098 R PMID: 95012680 best DB hits: BLAST: pir:G75252; probable brkB protein - Deinococcus radiodurans (strain; E=3e-19 pir:I40328; serum-resistance protein brkB [imported] - Bordetella; E=2e-12 pir:A82807; BrkB protein XF0432 [imported] - Xylella fastidiosa; E=2e-09 COG: DR2609; COG1295 tRNA-processing ribonuclease BN; E=2e-20; serum resistance protein brkB complement(2314118..2315098) Rhodopirellula baltica SH 1 1795263 NP_866148.1 CDS RB4514 NC_005027.1 2315151 2315867 R PMID: 94329558 PMID: 89024591 best DB hits: BLAST: ddbj:BAB03982.1; (AP001507) RNA polymerase ECF-type sigma factor; E=2e-07 embl:CAA09264.1; (AJ010601) ECF sigma factor [Streptomyces; E=2e-04 swissprot:Q45585; SIGW_BACSU RNA POLYMERASE SIGMA FACTOR SIGW; E=3e-04 COG: BH0263; COG1595 DNA-directed RNA polymerase specialized sigma; E=2e-08 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=3.9e-10; RNA polymerase ECF-type sigma factor complement(2315151..2315867) Rhodopirellula baltica SH 1 1793168 NP_866149.1 CDS RB4517 NC_005027.1 2315930 2316283 D PMID: 8108417 PMID: 97052967 best DB hits: BLAST: pir:C70304; 4a-hydroxytetrahydrobiopterin dehydratase (EC 4.2.1.96); E=2e-10 ddbj:BAA97373.1; (AB023044) gene_id:MWD22.5~similar to unknown; E=5e-10 swissprot:P43335; PHS_PSEAE PTERIN-4-ALPHA-CARBINOLAMINE; E=4e-09 COG: aq_049; COG2154 Pterin-4a-carbinolamine dehydratase; E=2e-11 PFAM: PF01329; Pterin 4 alpha carbinolamine dehydr; E=1.2e-18; pterin-4-alpha-carbinolamine dehydratase 2315930..2316283 Rhodopirellula baltica SH 1 1795006 NP_866150.1 CDS RB4519 NC_005027.1 2316280 2316618 D hypothetical protein 2316280..2316618 Rhodopirellula baltica SH 1 1796683 NP_866151.1 CDS RB4522 NC_005027.1 2316763 2318100 D hypothetical protein 2316763..2318100 Rhodopirellula baltica SH 1 1794471 NP_866152.1 CDS RB4526 NC_005027.1 2318176 2318385 D hypothetical protein 2318176..2318385 Rhodopirellula baltica SH 1 1790274 NP_866153.1 CDS RB4527 NC_005027.1 2318321 2319655 D PMID: 7972002 PMID: 7768872 best DB hits: BLAST: ddbj:BAB06601.1; (AP001517) 3-oxoacyl-(acyl-carrier protein); E=9e-37 pir:S77464; 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); E=1e-34 pir:G69842; 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); E=1e-34 COG: BH2882; COG0304 3-oxoacyl-(acyl-carrier-protein) synthase I; E=8e-38 PFAM: PF00109; Beta-ketoacyl synthase, N-ter; E=3.2e-10; 3-oxoacyl-ACP synthase 2318321..2319655 Rhodopirellula baltica SH 1 1793578 NP_866154.1 CDS RB4528 NC_005027.1 2319639 2319857 R hypothetical protein complement(2319639..2319857) Rhodopirellula baltica SH 1 1793077 NP_866155.1 CDS RB4529 NC_005027.1 2319854 2320399 R signal peptide complement(2319854..2320399) Rhodopirellula baltica SH 1 1795378 NP_866156.1 CDS czcA NC_005027.1 2320475 2323867 R PMID: 8829543 PMID: 2678100 best DB hits: BLAST: gb:AAG54908.1; AE005237_4 (AE005237) inner membrane; E=1e-109 swissprot:P38054; YBDE_ECOLI HYPOTHETICAL 114.7 KDA PROTEIN IN; E=1e-109 gb:AAD11749.1; (AF067954) inner membrane protoncation; E=1e-109 COG: ybdE; COG0841 Cation/multidrug efflux pump; E=1e-110 PFAM: PF00873; AcrB/AcrD/AcrF family; E=5.1e-154; cation efflux system protein czcA-1 complement(2320475..2323867) Rhodopirellula baltica SH 1 1796649 NP_866157.1 CDS RB4532 NC_005027.1 2323927 2325441 R PMID: 12065505 best DB hits: BLAST: embl:CAC21493.1; (AJ278866) MchE protein [Escherichia coli]; E=0.37 swissprot:P22519; CVAA_ECOLI COLICIN V SECRETION PROTEIN CVAA; E=0.38 pir:E82263; conserved hypothetical protein VC0913 [imported] -; E=0.76 PFAM: PF02221; E1 family; E=0.88 PF00364; Biotin-requiring enzyme; E=0.0054; MchE protein complement(2323927..2325441) Rhodopirellula baltica SH 1 1796337 NP_866158.1 CDS RB4536 NC_005027.1 2325446 2325652 D hypothetical protein 2325446..2325652 Rhodopirellula baltica SH 1 1793746 NP_866159.1 CDS RB4538 NC_005027.1 2325701 2326219 R signal peptide complement(2325701..2326219) Rhodopirellula baltica SH 1 1796849 NP_866160.1 CDS czcC NC_005027.1 2326366 2327802 R PMID: 8829543 best DB hits: BLAST: gb:AAG09627.1; (AY007258) CztC [Pseudomonas fluorescens]; E=3e-15 pir:JC4698; divalent cation resistant determinant protein C -; E=4e-15 swissprot:P13509; CZCC_ALCEU COBALT-ZINC-CADMIUM RESISTANCE; E=3e-14 COG: PA2522; COG1538 Outer membrane protein; E=8e-13 PFAM: PF02321; Outer membrane efflux protein; E=2.9e-11; divalent cation resistant determinant protein C complement(2326366..2327802) Rhodopirellula baltica SH 1 1795484 NP_866161.1 CDS RB4542 NC_005027.1 2328049 2328231 R best DB hits: PFAM: PF00048; Small cytokines (intecrine/chemokine; E=0.2; hypothetical protein complement(2328049..2328231) Rhodopirellula baltica SH 1 1794380 NP_866162.1 CDS RB4544 NC_005027.1 2328228 2328704 R signal peptide complement(2328228..2328704) Rhodopirellula baltica SH 1 1796135 NP_866163.1 CDS RB4547 NC_005027.1 2328848 2330116 R PMID: 8390993 best DB hits: BLAST: pir:T03939; potassium channel protein - maize ----- embl:; E=0.27 pir:T45609; hypothetical protein F13G24.40 - Arabidopsis thaliana; E=0.47 ddbj:BAB09948.1; (AB005249) gene_id:MXM12.8~unknown protein; E=0.47 PFAM: PF00023; Ank repeat; E=2.5e-08; ankyrin protein complement(2328848..2330116) Rhodopirellula baltica SH 1 1796221 NP_866164.1 CDS RB4550 NC_005027.1 2330227 2330508 D hypothetical protein 2330227..2330508 Rhodopirellula baltica SH 1 1790105 NP_866165.1 CDS RB4551 NC_005027.1 2330298 2330537 R hypothetical protein complement(2330298..2330537) Rhodopirellula baltica SH 1 1795988 NP_866166.1 CDS RB4552 NC_005027.1 2330568 2330717 D hypothetical protein 2330568..2330717 Rhodopirellula baltica SH 1 1793351 NP_866167.1 CDS RB4553 NC_005027.1 2330683 2330889 D hypothetical protein 2330683..2330889 Rhodopirellula baltica SH 1 1792626 NP_866168.1 CDS RB4554 NC_005027.1 2330930 2331106 D hypothetical protein 2330930..2331106 Rhodopirellula baltica SH 1 1791243 NP_866169.1 CDS RB4555 NC_005027.1 2331156 2331341 R hypothetical protein complement(2331156..2331341) Rhodopirellula baltica SH 1 1792965 NP_866170.1 CDS RB4556 NC_005027.1 2331428 2332459 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 2331428..2332459 Rhodopirellula baltica SH 1 1795762 NP_866171.1 CDS RB4557 NC_005027.1 2332551 2333021 D signal peptide 2332551..2333021 Rhodopirellula baltica SH 1 1792083 NP_866172.1 CDS RB4558 NC_005027.1 2332976 2333224 R hypothetical protein complement(2332976..2333224) Rhodopirellula baltica SH 1 1796642 NP_866173.1 CDS RB4561 NC_005027.1 2333282 2335552 D PMID: 8969205 PMID: 10220172 best DB hits: BLAST: pir:B82755; beta-hexosaminidase precursor XF0847 [imported] -; E=2e-35 swissprot:P96155; HEX1_VIBFU BETA-HEXOSAMINIDASE; E=4e-26 pir:A82301; beta-N-acetylhexosaminidase VC0613 [imported] - Vibrio; E=2e-25 PFAM: PF02838; Glycosyl hydrolase 20,; E=0.00019 PF00728; Glycosyl hydrolase 20,; E=5.3e-07; beta-hexosaminidase 2333282..2335552 Rhodopirellula baltica SH 1 1794188 NP_866174.1 CDS sglT NC_005027.1 2335625 2337433 D PMID: 8652595 PMID: 10835424 best DB hits: BLAST: swissprot:P96169; SGLT_VIBPA SODIUMGLUCOSE COTRANSPORTER; E=5e-24 ddbj:BAA11215.1; (D78137) Na+glucose symporter [Vibrio; E=6e-22 ddbj:BAA22950.1; (AB008225) Na+-glucose cotransporter type 1; E=4e-16 COG: sll1087; COG0591 Na+/proline, Na+/panthothenate symporters and; E=3e-13 yidK; COG0591 Na+/proline, Na+/panthothenate symporters and related; E=1e-06 MTH1856; COG0591 Na+/proline, Na+/panthothenate symporters and; E=1e-06 PFAM: PF00474; Sodium:solute symporter family; E=0.0075; sodium/glucose cotransporter 2335625..2337433 Rhodopirellula baltica SH 1 1797008 NP_866175.1 CDS chd1 NC_005027.1 2337476 2338300 R PMID: 99429847 best DB hits: BLAST: embl:CAA06738.1; (AJ005843) cryptic haloacid dehalogenase 1; E=2e-31 embl:CAB61854.1; (AL133252) dehalogenase [Streptomyces; E=3e-24 pdb:1ZRN; Intermediate Structure Of L-2-Haloacid Dehalogenase; E=7e-20 COG: BH3587; COG0546 Predicted phosphatases; E=2e-09 PA0810; COG1011 Predicted hydrolases of the HAD superfamily; E=7e-07 DR2613; COG0637 Predicted phosphatase/phosphohexomutase; E=6e-06 PFAM: PF00702; haloacid dehalogenase-like hydrolas; E=8.2e-21; cryptic haloacid dehalogenase 1 complement(2337476..2338300) Rhodopirellula baltica SH 1 1792256 NP_866176.1 CDS RB4571 NC_005027.1 2338439 2339095 R best DB hits: BLAST: gb:AAD54003.1; AF088856_2 (AF088856) hypothetical protein; E=4e-20 embl:CAB69777.1; (AL137187) tetR-family transcriptional; E=6e-16 embl:CAB93063.1; (AL357432) transcriptional regulator; E=2e-14 COG: VCA0586; COG1309 Transcriptional regulator; E=1e-11 PFAM: PF00440; Bacterial regulatory proteins, tetR; E=5.4e-11; hypothetical protein complement(2338439..2339095) Rhodopirellula baltica SH 1 1796610 NP_866177.1 CDS RB4572 NC_005027.1 2339103 2339375 R hypothetical protein complement(2339103..2339375) Rhodopirellula baltica SH 1 1791337 NP_866178.1 CDS RB4575 NC_005027.1 2339600 2340643 D signal peptide 2339600..2340643 Rhodopirellula baltica SH 1 1795284 NP_866179.1 CDS RB4576 NC_005027.1 2340650 2342152 R best DB hits: BLAST: pir:T01022; hypothetical protein YUP8H12R.5 - Arabidopsis thaliana; E=0.028 pir:T01023; hypothetical protein YUP8H12R.6 - Arabidopsis thaliana; E=0.032 pir:T01021; hypothetical protein YUP8H12R.4 - Arabidopsis thaliana; E=0.036; signal peptide complement(2340650..2342152) Rhodopirellula baltica SH 1 1792813 NP_866180.1 CDS asnB NC_005027.1 2342223 2344127 R PMID: 10498721 PMID: 8755891 best DB hits: BLAST: gb:AAF34252.1; AF168003_7 (AF168003) asparagine; E=1e-100 gb:AAF24002.1; (AF035937) WbpS [Pseudomonas aeruginosa]; E=9e-94 ddbj:BAA33606.1; (AB012956) probable asparagine synthetase; E=1e-89 COG: BS_asnB; COG0367 Asparagine synthase (glutamine-hydrolyzing); E=2e-86 PFAM: PF00310; Glutamine amidotransferases clas; E=5.6e-21 PF00733; Asparagine synthase; E=1.5e-51; asparagine synthetase [glutamine-hydrolyzing] 1 complement(2342223..2344127) Rhodopirellula baltica SH 1 1790471 NP_866181.1 CDS RB4578 NC_005027.1 2344200 2345492 R PMID: 7968456 best DB hits: BLAST: gb:AAG20419.1; (AE005114) hemolysin protein; Hlp [Halobacterium; E=3e-25 pir:F72326; hemolysin-related protein - Thermotoga maritima (strain; E=9e-25 pir:H71299; probable hemolysin (tlyC) - syphilis spirochete -----; E=6e-23 COG: VNG2308G; COG1253 Uncharacterized CBS domain-containing proteins; E=3e-26 PFAM: PF00571; CBS domain; E=7e-06; hemolysin protein complement(2344200..2345492) Rhodopirellula baltica SH 1 1791776 NP_866182.1 CDS RB4579 NC_005027.1 2345489 2346073 R PMID: 8905232 best DB hits: BLAST: swissprot:P77385; YBEY_ECOLI HYPOTHETICAL 17.5 KDA PROTEIN IN; E=4e-06 embl:CAB62265.1; (AJ249116) YbeY protein [Salmonella typhimurium]; E=4e-06 gb:AAG54992.1; AE005245_1 (AE005245) orf, hypothetical protein; E=5e-06 COG: ybeY; COG0319 Predicted metal-dependent hydrolase; E=4e-07 PFAM: PF02130; Uncharacterized protein family UPF00; E=6.9e-14; hypothetical protein complement(2345489..2346073) Rhodopirellula baltica SH 1 1794659 NP_866183.1 CDS RB4580 NC_005027.1 2346070 2348454 R PMID: 8969508 best DB hits: BLAST: swissprot:P46344; YQFF_BACSU HYPOTHETICAL 79.2 KD PROTEIN IN; E=1e-58 ddbj:BAB05081.1; (AP001511) BH1362~unknown conserved protein; E=4e-54 pir:E72244; conserved hypothetical protein - Thermotoga maritima; E=1e-48 COG: BS_yqfF; COG1480 Predicted membrane-associated HD superfamily; E=1e-59 PFAM: PF01966; HD domain; E=5.3e-21; hypothetical protein complement(2346070..2348454) Rhodopirellula baltica SH 1 1793550 NP_866184.1 CDS RB4582 NC_005027.1 2348451 2349599 R PMID: 8444794 best DB hits: BLAST: swissprot:P46343; PHOL_BACSU PHOH-LIKE PROTEIN ----- pir:; E=1e-70 ddbj:BAB05080.1; (AP001511) phosphate starvation-induced protein; E=4e-69 embl:CAA12155.1; (AJ224829) ORF4 [Bacillus megaterium]; E=8e-69 COG: BS_phoH; COG1702 Phosphate starvation-inducible protein PhoH,; E=1e-71 ybeZ; COG1702 Phosphate starvation-inducible protein PhoH, predicted; E=4e-68 Rv2368c; COG1702 Phosphate starvation-inducible protein PhoH,; E=2e-65 PFAM: PF02562; PhoH-like protein; E=1.8e-133; phoH-like protein complement(2348451..2349599) Rhodopirellula baltica SH 1 1792998 NP_866185.1 CDS cdS NC_005027.1 2349706 2350752 R PMID: 2995358 PMID: 8557688 PMID: 9083091 best DB hits: BLAST: gb:AAB61972.1; (U60832) CDP-diglyceride synthetase [Haemophilus; E=2e-19 swissprot:P44937; CDSA_HAEIN PHOSPHATIDATE CYTIDYLYLTRANSFERASE; E=3e-19 gb:AAB61967.1; (U60831) CDP diglyceride synthetase [Haemophilus; E=3e-19 COG: HI0919; COG0575 CDP-diglyceride synthetase; E=2e-20 PFAM: PF01148; Phosphatidate cytidylyltransfe; E=5.6e-15; phosphatidate cytidylyltransferase complement(2349706..2350752) Rhodopirellula baltica SH 1 1790531 NP_866186.1 CDS TPX NC_005027.1 2350844 2351362 R PMID: 7499381 best DB hits: BLAST: swissprot:P80864; TPX_BACSU PROBABLE THIOL PEROXIDASE; E=2e-39 swissprot:P31307; TPX_STRPA PROBABLE THIOL PEROXIDASE -----; E=4e-33 swissprot:P42366; TPX_STRGC PROBABLE THIOL PEROXIDASE -----; E=5e-33 COG: BS_ytgI; COG2077 Thiol peroxidase; E=1e-40 APE2125; COG1225 Peroxiredoxins; E=1e-08 DR2242; COG0450 Thiol - alkyl hydroperoxide reductases; E=1e-05 PFAM: PF00578; AhpC/TSA family; E=9.5e-20; thiol peroxidase complement(2350844..2351362) Rhodopirellula baltica SH 1 1790388 NP_866187.1 CDS RB4589 NC_005027.1 2351461 2351649 R hypothetical protein complement(2351461..2351649) Rhodopirellula baltica SH 1 1792451 NP_866188.1 CDS RB4590 NC_005027.1 2351800 2352024 R hypothetical protein complement(2351800..2352024) Rhodopirellula baltica SH 1 1797050 NP_866189.1 CDS recO NC_005027.1 2352125 2352955 D PMID: 2544549 best DB hits: BLAST: pir:S72590; hypothetical protein B1937_F1_25 - Mycobacterium leprae; E=9e-10 pir:A70586; hypothetical protein Rv2362c - Mycobacterium; E=2e-09 ddbj:BAB05088.1; (AP001511) BH1369~unknown conserved protein; E=3e-08 COG: Rv2362c; COG1381 Recombinational DNA repair protein; E=2e-10 PFAM: PF02565; Recombination protein O; E=3.8e-20; DNA repair protein recO 2352125..2352955 Rhodopirellula baltica SH 1 1792922 NP_866190.1 CDS RB4593 NC_005027.1 2353015 2354229 D signal peptide 2353015..2354229 Rhodopirellula baltica SH 1 1792309 NP_866191.1 CDS RB4595 NC_005027.1 2354226 2354777 D signal peptide 2354226..2354777 Rhodopirellula baltica SH 1 1792462 NP_866192.1 CDS RB4597 NC_005027.1 2354790 2355821 R PMID: 8953720 best DB hits: BLAST: embl:CAA57770.2; (X82326) malate permease [Oenococcus oeni]; E=0.16 pir:H72378; conserved hypothetical protein - Thermotoga maritima; E=0.19; malate permease complement(2354790..2355821) Rhodopirellula baltica SH 1 1797069 NP_866193.1 CDS RB4598 NC_005027.1 2355806 2356726 D hypothetical protein 2355806..2356726 Rhodopirellula baltica SH 1 1792022 NP_866194.1 CDS RB4601 NC_005027.1 2356778 2357734 D hypothetical protein 2356778..2357734 Rhodopirellula baltica SH 1 1796679 NP_866195.1 CDS RB4603 NC_005027.1 2357793 2358854 R hypothetical protein complement(2357793..2358854) Rhodopirellula baltica SH 1 1790110 NP_866196.1 CDS dapA NC_005027.1 2358964 2359947 R PMID: 8098035 PMID: 7853400 PMID: 8081752 best DB hits: BLAST: swissprot:Q07607; MOSA_RHIME MOSA PROTEIN ----- pir: B53308; E=2e-29 embl:CAC24079.1; (AL512981) ORF-c25_010 [Sulfolobus solfataricus]; E=7e-29 pir:S56523; dihydrodipicolinate synthase homolog yjhH - Escherichia; E=1e-28 COG: yjhH; COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate; E=1e-29 PFAM: PF00701; Dihydrodipicolinate synthetase famil; E=2.2e-57; dihydrodipicolinate synthase complement(2358964..2359947) Rhodopirellula baltica SH 1 1796376 NP_866197.1 CDS RB4606 NC_005027.1 2359956 2360591 R PMID: 9371463 best DB hits: BLAST: pir:D69100; probable protein disulfide-isomerase (EC 5.3.4.1); E=5e-08 gb:AAG20098.1; (AE005089) Vng1905c [Halobacterium sp. NRC-1]; E=1e-04 pir:B70456; thioredoxin - Aquifex aeolicus ----- gb:; E=6e-04 COG: MTH1745; COG0526 Thiol-disulfide isomerase and thioredoxins; E=5e-09 VNG1905C; COG1331 Highly conserved protein containing a thioredoxin; E=1e-05 aq_1811; COG0526 Thiol-disulfide isomerase and thioredoxins; E=6e-05; protein disulfide-isomerase complement(2359956..2360591) Rhodopirellula baltica SH 1 1793039 NP_866198.1 CDS RB4607 NC_005027.1 2360670 2360798 R hypothetical protein complement(2360670..2360798) Rhodopirellula baltica SH 1 1792449 NP_866199.1 CDS RB4608 NC_005027.1 2360777 2360980 R hypothetical protein complement(2360777..2360980) Rhodopirellula baltica SH 1 1791486 NP_866200.1 CDS RB4609 NC_005027.1 2360819 2360977 D hypothetical protein 2360819..2360977 Rhodopirellula baltica SH 1 1795017 NP_866201.1 CDS ruvA NC_005027.1 2360999 2361622 R PMID: 21128732 best DB hits: BLAST: pir:H81795; Holliday junction DNA helicase NMA2221 [imported] -; E=6e-11 pir:B81218; Holliday junction DNA helicase RuvA NMB0265 [imported] -; E=1e-10 pir:D81662; Holliday junction DNA helicase RuvA TC0788 [imported] -; E=8e-09 COG: NMB0265; COG0632 Holliday junction resolvasome DNA-binding subunit; E=1e-11 PFAM: PF02505; Methyl-coenzyme M reductase op; E=0.16 PF01330; RuvA N terminal domain; E=4.3e-05 PF02904; RuvA central domain II; E=1.1e-06; holliday junction DNA helicase ruvA complement(2360999..2361622) Rhodopirellula baltica SH 1 1793640 NP_866202.1 CDS nusB NC_005027.1 2361619 2362056 R Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB complement(2361619..2362056) Rhodopirellula baltica SH 1 1791023 NP_866203.1 CDS RB4613 NC_005027.1 2362178 2362510 R best DB hits: BLAST: swissprot:O32113; YUTM_BACSU HYPOTHETICAL 12.8 KDA PROTEIN IN; E=5e-19 gb:AAD39571.1; AC007067_11 (AC007067) T10O24.11 [Arabidopsis; E=7e-18 swissprot:O67709; YI57_AQUAE HYPOTHETICAL PROTEIN AQ_1857 -----; E=1e-17 COG: BS_yutM; COG0316 Uncharacterized ACR; E=5e-20 PFAM: PF01521; HesB-like domain; E=8.4e-43; hesB family protein complement(2362178..2362510) Rhodopirellula baltica SH 1 1791736 NP_866204.1 CDS RB4614 NC_005027.1 2362491 2362625 R hypothetical protein complement(2362491..2362625) Rhodopirellula baltica SH 1 1793906 NP_866205.1 CDS RB4616 NC_005027.1 2362647 2362991 D hypothetical protein 2362647..2362991 Rhodopirellula baltica SH 1 1790928 NP_866206.1 CDS RB4619 NC_005027.1 2363086 2364531 D best DB hits: BLAST: embl:CAB82869.1; (AJ276673) hypothetical protein [Streptomyces; E=8e-08 ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=1e-07 gb:AAC23913.1; (AF039207) NADH-dependent dehydrogenase homolog; E=5e-07 COG: BH1248; COG0673 Predicted dehydrogenases and related proteins; E=1e-08 PFAM: PF01408; Oxidoreductase, NAD-bin; E=9.6e-18 PF02894; Oxidoreductase, C-termi; E=0.086; NADH-dependent dehydrogenase 2363086..2364531 Rhodopirellula baltica SH 1 1794744 NP_866207.1 CDS RB4621 NC_005027.1 2364675 2369168 R best DB hits: PFAM: PF00034; Cytochrome c; E=0.003; signal peptide complement(2364675..2369168) Rhodopirellula baltica SH 1 1791002 NP_866208.1 CDS RB4626 NC_005027.1 2369165 2369338 R hypothetical protein complement(2369165..2369338) Rhodopirellula baltica SH 1 1794367 NP_866209.1 CDS RB4627 NC_005027.1 2369342 2369515 R hypothetical protein complement(2369342..2369515) Rhodopirellula baltica SH 1 1795231 NP_866210.1 CDS RB4629 NC_005027.1 2369590 2369868 R best DB hits: BLAST: pir:D83447; conserved hypothetical protein PA1574 [imported] -; E=5e-21 swissprot:P36768; YAIE_ECOLI HYPOTHETICAL 10.2 KD PROTEIN IN; E=2e-15 pir:A82395; conserved hypothetical protein VCA0970 [imported] -; E=4e-11 COG: PA1574; COG3123 Uncharacterized BCR; E=5e-22; hypothetical protein complement(2369590..2369868) Rhodopirellula baltica SH 1 1794532 NP_866211.1 CDS RB4631 NC_005027.1 2369965 2371299 R best DB hits: BLAST: gb:AAC38670.2; (AF062345) perosamine synthetase; LpsC; E=9e-10 gb:AAB81626.1; (AF025396) probable perosamine synthetase [Vibrio; E=1e-08 gb:AAD28492.1; AF145039_4 (AF145039) aminotransferase spcS2; E=5e-08 COG: PAB0774; COG0399 Predicted pyridoxal phosphate-dependent enzyme; E=1e-08 PFAM: PF01041; DegT/DnrJ/EryC1/StrS family; E=0.099; aminotransferase complement(2369965..2371299) Rhodopirellula baltica SH 1 1791720 NP_866212.1 CDS RB4632 NC_005027.1 2371386 2371805 D best DB hits: BLAST: ddbj:BAB04948.1; (AP001511) BH1229~unknown conserved protein; E=3e-04 gb:AAK02312.1; (AE006057) YajC [Pasteurella multocida]; E=3e-04 pir:D72325; hypothetical protein - Thermotoga maritima (strain MSB8); E=5e-04 COG: BH1229; COG1862 Preprotein translocase subunit YajC; E=3e-05 PFAM: PF02699; Uncharacterized secreted proteins, Y; E=5.5e-17; preprotein translocase subunit yajC 2371386..2371805 Rhodopirellula baltica SH 1 1791806 NP_866213.1 CDS secD NC_005027.1 2371842 2375180 D PMID: 10910347 best DB hits: BLAST: pir:A82832; protein-export membrane protein XF0225 [imported] -; E=8e-45 swissprot:Q55610; SECD_SYNY3 PROTEIN-EXPORT MEMBRANE PROTEIN SECD; E=1e-44 swissprot:O67102; SECD_AQUAE PROTEIN-EXPORT MEMBRANE PROTEIN SECD; E=3e-42 COG: XF0225; COG0342 Preprotein translocase subunit SecD; E=7e-46 PFAM: PF02355; Protein export membrane protein; E=0.012 PF00654; Voltage gated chloride channel; E=0.18 PF02355; Protein export membrane protein; E=6.6e-66; protein-export membrane protein secD 2371842..2375180 Rhodopirellula baltica SH 1 1792579 NP_866214.1 CDS RB4636 NC_005027.1 2374181 2374681 R signal peptide complement(2374181..2374681) Rhodopirellula baltica SH 1 1790157 NP_866215.1 CDS aslA NC_005027.1 2375327 2376823 D PMID: 7910580 PMID: 2303452 best DB hits: BLAST: embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=3e-41 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=3e-41 pdb:1E2S; P Chain P, Crystal Structure Of An Arylsulfatase A; E=3e-40 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=6e-29 HI1246; COG1368 Phosphoglycerol transferase and related proteins,; E=4e-05 VNG0061C; COG3119 Arylsulfatase A and related enzymes; E=5e-04 PFAM: PF00884; Sulfatase; E=2.4e-48; arylsulphatase A 2375327..2376823 Rhodopirellula baltica SH 1 1790411 NP_866216.1 CDS RB4639 NC_005027.1 2376830 2377000 D hypothetical protein 2376830..2377000 Rhodopirellula baltica SH 1 1795584 NP_866217.1 CDS RB4640 NC_005027.1 2377043 2377399 R hypothetical protein complement(2377043..2377399) Rhodopirellula baltica SH 1 1790538 NP_866218.1 CDS RB4641 NC_005027.1 2377086 2377328 R hypothetical protein complement(2377086..2377328) Rhodopirellula baltica SH 1 1795951 NP_866219.1 CDS RB4642 NC_005027.1 2377301 2377558 D PMID: 11679351; hypothetical protein 2377301..2377558 Rhodopirellula baltica SH 1 1793929 NP_866220.1 CDS RB4643 NC_005027.1 2377555 2377845 D hypothetical protein 2377555..2377845 Rhodopirellula baltica SH 1 1791449 NP_866221.1 CDS RB4644 NC_005027.1 2377769 2378095 D hypothetical protein 2377769..2378095 Rhodopirellula baltica SH 1 1796652 NP_866222.1 CDS RB4645 NC_005027.1 2378057 2378266 R hypothetical protein complement(2378057..2378266) Rhodopirellula baltica SH 1 1795832 NP_866223.1 CDS cox3 NC_005027.1 2378286 2378894 R PMID: 2562384 best DB hits: BLAST: pir:A83632; cytochrome c oxidase, subunit III PA0108 [imported] -; E=6e-04 gb:AAG19157.1; (AE005013) cytochrome c oxidase subunit III; CoxC; E=0.007 gb:AAC09434.1; (M68929) coxIII [Marchantia polymorpha]; E=0.059 COG: PA0108; COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit; E=6e-05 VNG0662G; COG1845 Heme/copper-type cytochrome/quinol oxidase,; E=7e-04 PFAM: PF00510; Cytochrome c oxidase subunit III; E=0.55; cytochrome c oxidase, subunit III complement(2378286..2378894) Rhodopirellula baltica SH 1 1791892 NP_866224.1 CDS RB4648 NC_005027.1 2378986 2379429 D hypothetical protein 2378986..2379429 Rhodopirellula baltica SH 1 1796785 NP_866225.1 CDS RB4649 NC_005027.1 2379014 2379238 R hypothetical protein complement(2379014..2379238) Rhodopirellula baltica SH 1 1794351 NP_866226.1 CDS RB4650 NC_005027.1 2379380 2379601 R hypothetical protein complement(2379380..2379601) Rhodopirellula baltica SH 1 1795077 NP_866227.1 CDS thiG NC_005027.1 2379598 2380461 R functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase complement(2379598..2380461) Rhodopirellula baltica SH 1 1794534 NP_866228.1 CDS RB4652 NC_005027.1 2380494 2380652 D hypothetical protein 2380494..2380652 Rhodopirellula baltica SH 1 1795189 NP_866229.1 CDS RB4653 NC_005027.1 2380658 2380870 R best DB hits: BLAST: pir:D83599; conserved hypothetical protein PA0380 [imported] -; E=5e-07 pir:T35489; hypothetical protein SC6E10.02 - Streptomyces; E=2e-06 gb:AAC08230.1; (U38804) ORF71 [Porphyra purpurea]; E=1e-05 COG: PA0380; COG2104 Uncharacterized ACR, possibly involved in thiamine; E=5e-08 ssr0102; COG2104 Uncharacterized ACR, possibly involved in; E=0.001 thiS; COG2104 Uncharacterized ACR, possibly involved in thiamine; E=0.006 PFAM: PF02597; Uncharacterized ACR, COG2104; E=2e-11; hypothetical protein complement(2380658..2380870) Rhodopirellula baltica SH 1 1794477 NP_866230.1 CDS RB4654 NC_005027.1 2380867 2381871 R best DB hits: BLAST: pir:T34928; hypothetical protein SC3F9.06 SC3F9.06 - Streptomyces; E=1e-112 ddbj:BAB04968.1; (AP001511) BH1249~unknown conserved protein; E=2e-10 swissprot:P54724; YFIH_BACSU HYPOTHETICAL 34.8 KD PROTEIN IN GLVBC; E=2e-08; hypothetical protein complement(2380867..2381871) Rhodopirellula baltica SH 1 1791028 NP_866231.1 CDS RB4657 NC_005027.1 2381865 2382236 D hypothetical protein 2381865..2382236 Rhodopirellula baltica SH 1 1794661 NP_866232.1 CDS RB4658 NC_005027.1 2382199 2382780 R best DB hits: BLAST: embl:CAB16799.1; (Z99707) protein [Arabidopsis thaliana]; E=7e-05 swissprot:Q58622; YC25_METJA HYPOTHETICAL PROTEIN MJ1225 -----; E=2e-04 pir:E82251; inosine monophosphate dehydrogenase-related protein; E=3e-04 COG: MJ1225; COG0517 CBS domains; E=2e-05 MTH126; COG2524 Predicted transcriptional regulator with C-terminal; E=8e-05 aq_2023_2; COG0517 CBS domains; E=1e-04 PFAM: PF00571; CBS domain; E=1.6e-11; inosine monophosphate dehydrogenase-like protein complement(2382199..2382780) Rhodopirellula baltica SH 1 1794295 NP_866233.1 CDS RB4659 NC_005027.1 2382777 2382941 R hypothetical protein complement(2382777..2382941) Rhodopirellula baltica SH 1 1792864 NP_866234.1 CDS RB4660 NC_005027.1 2382949 2383479 D hypothetical protein 2382949..2383479 Rhodopirellula baltica SH 1 1793769 NP_866235.1 CDS RB4661 NC_005027.1 2383544 2383750 R hypothetical protein complement(2383544..2383750) Rhodopirellula baltica SH 1 1796819 NP_866236.1 CDS RB4662 NC_005027.1 2383563 2383676 D signal peptide 2383563..2383676 Rhodopirellula baltica SH 1 1795758 NP_866237.1 CDS RB4663 NC_005027.1 2383642 2384796 D hypothetical protein 2383642..2384796 Rhodopirellula baltica SH 1 1794600 NP_866238.1 CDS RB4667 NC_005027.1 2384918 2386273 R best DB hits: BLAST: gb:AAB89850.1; (AE001008) conserved hypothetical protein; E=0.24; hypothetical protein complement(2384918..2386273) Rhodopirellula baltica SH 1 1790795 NP_866239.1 CDS RB4670 NC_005027.1 2386422 2387993 R best DB hits: BLAST: gb:AAF82144.1; AC034256_8 (AC034256) Contains similarity to F-box; E=8e-04 ddbj:BAB21785.1; (AB051481) KIAA1694 protein [Homo sapiens]; E=0.40; hypothetical protein complement(2386422..2387993) Rhodopirellula baltica SH 1 1793679 NP_866240.1 CDS ruvC NC_005027.1 2388047 2388583 R PMID: 1657895 PMID: 1885548 PMID: 1758493 PMID: 9442895 best DB hits: BLAST: pir:H82149; crossover junction endodeoxyribonuclease RuvC VC1847; E=6e-19 swissprot:O83530; RUVC_TREPA CROSSOVER JUNCTION; E=8e-19 pir:F81271; crossover junction endodeoxyribonuclease (EC 3.1.22.4); E=2e-16 COG: VC1847; COG0817 Holliday junction resolvasome endonuclease subunit; E=6e-20 PFAM: PF02075; Crossover junction endodeoxyribonucl; E=1.1e-46; crossover junction endodeoxyribonuclease ruvC complement(2388047..2388583) Rhodopirellula baltica SH 1 1797025 NP_866241.1 CDS cysS NC_005027.1 2388565 2390451 R PMID: 2014166 PMID: 1864365 best DB hits: BLAST: gb:AAK03029.1; (AE006134) CysS [Pasteurella multocida]; E=5e-91 swissprot:Q9KGF4; SYC_BACHD CYSTEINYL-TRNA SYNTHETASE; E=2e-89 swissprot:O58370; SYC_PYRHO CYSTEINYL-TRNA SYNTHETASE; E=3e-88 COG: BH0111; COG0215 Cysteinyl-tRNA synthetase; E=2e-90 PFAM: PF01406; tRNA synthetases class I (C); E=1.8e-122; cysteinyl-tRNA synthetase complement(2388565..2390451) Rhodopirellula baltica SH 1 1792243 NP_866242.1 CDS RB4676 NC_005027.1 2390414 2391079 R hypothetical protein complement(2390414..2391079) Rhodopirellula baltica SH 1 1790419 NP_866243.1 CDS RB4678 NC_005027.1 2390618 2391217 D signal peptide 2390618..2391217 Rhodopirellula baltica SH 1 1794902 NP_866244.1 CDS RB4679 NC_005027.1 2391214 2391741 D best DB hits: PFAM: PF01336; OB-fold nucleic acid binding domain; E=0.015; signal peptide 2391214..2391741 Rhodopirellula baltica SH 1 1793816 NP_866245.1 CDS RB4681 NC_005027.1 2391934 2392131 D PMID: 90231432 PMID: 94293754 best DB hits: BLAST: swissprot:P48859; CSPF_STRCO COLD SHOCK PROTEIN SCOF -----; E=8e-10 embl:CAB76978.1; (AL159178) cold-shock protein [Streptomyces; E=2e-09 pir:T34593; cold-shock domain protein - Streptomyces coelicolor; E=1e-08 COG: XF2352; COG1278 Cold shock proteins; E=2e-08 PFAM: PF00313; 'Cold-shock' DNA-binding domain; E=2.2e-19; cold shock protein scoF 2391934..2392131 Rhodopirellula baltica SH 1 1791516 NP_866246.1 CDS RB4682 NC_005027.1 2392260 2392727 D hypothetical protein 2392260..2392727 Rhodopirellula baltica SH 1 1790108 NP_866247.1 CDS RB4685 NC_005027.1 2392889 2395486 R best DB hits: PFAM: PF00515; TPR Domain; E=0.00063; hypothetical protein complement(2392889..2395486) Rhodopirellula baltica SH 1 1795486 NP_866248.1 CDS RB4691 NC_005027.1 2395001 2395855 D hypothetical protein 2395001..2395855 Rhodopirellula baltica SH 1 1792068 NP_866249.1 CDS RB4692 NC_005027.1 2395824 2396198 D best DB hits: BLAST: pir:S31926; myosin IB heavy chain, brush border - chicken -----; E=0.12; hypothetical protein 2395824..2396198 Rhodopirellula baltica SH 1 1793584 NP_866250.1 CDS RB4694 NC_005027.1 2396117 2397352 D PMID: 2898203 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 2396117..2397352 Rhodopirellula baltica SH 1 1791292 NP_866251.1 CDS RB4697 NC_005027.1 2397357 2397539 D signal peptide 2397357..2397539 Rhodopirellula baltica SH 1 1796530 NP_866252.1 CDS RB4698 NC_005027.1 2397601 2397861 D hypothetical protein 2397601..2397861 Rhodopirellula baltica SH 1 1793055 NP_866253.1 CDS RB4699 NC_005027.1 2397798 2400146 R PMID: 7528875 best DB hits: BLAST: ddbj:BAB04561.1; (AP001510) BH0842~unknown conserved protein; E=2e-09 embl:CAB56146.1; (AL117669) large secreted protein; E=7e-07 embl:CAB91126.1; (AL355913) hypothetical protein SC5H4.14; E=0.17; hypothetical protein complement(2397798..2400146) Rhodopirellula baltica SH 1 1795501 NP_866254.1 CDS RB4702 NC_005027.1 2400274 2401710 R PMID: 10509949 best DB hits: BLAST: pir:B75555; probable lipaseesterase - Deinococcus radiodurans; E=6e-08 swissprot:Q04457; EST1_CAEEL GUT ESTERASE PRECURSOR (NON-SPECIFIC; E=9e-06 pir:T32061; gut-specific carboxylesterase ges-1 - Caenorhabditis; E=9e-06 COG: DR0133; COG0657 Acetyl esterase; E=6e-09; lipase/esterase complement(2400274..2401710) Rhodopirellula baltica SH 1 1790916 NP_866255.1 CDS RB4703 NC_005027.1 2401532 2403604 D hypothetical protein 2401532..2403604 Rhodopirellula baltica SH 1 1791929 NP_866256.1 CDS RB4704 NC_005027.1 2403601 2403714 D hypothetical protein 2403601..2403714 Rhodopirellula baltica SH 1 1793283 NP_866257.1 CDS RB4705 NC_005027.1 2403694 2403864 R hypothetical protein complement(2403694..2403864) Rhodopirellula baltica SH 1 1792888 NP_866258.1 CDS RB4707 NC_005027.1 2403890 2404960 R best DB hits: BLAST: embl:CAB45032.1; (AL078635) large multi-functional; E=6e-13 embl:CAB58265.1; (AL121849) multi-domain protein; E=3e-10; large multifunctional protein- glycosyl hydrolase complement(2403890..2404960) Rhodopirellula baltica SH 1 1790640 NP_866259.1 CDS RB4709 NC_005027.1 2404884 2405132 R hypothetical protein complement(2404884..2405132) Rhodopirellula baltica SH 1 1796670 NP_866260.1 CDS RB4711 NC_005027.1 2405152 2405601 D PMID: 11823852 best DB hits: BLAST: gb:AAK02297.1; (AE006055) unknown [Pasteurella multocida]; E=0.011 pir:E83286; conserved hypothetical protein PA2864 [imported] -; E=0.018 pir:B81002; conserved hypothetical protein NMB2140 [imported] -; E=0.033 COG: PA2864; COG2259 Predicted membrane protein; E=0.002 NMB2140; COG3229 Uncharacterized membrane protein; E=0.003 Rv3005c; COG2259 Predicted membrane protein; E=0.010; hypothetical protein 2405152..2405601 Rhodopirellula baltica SH 1 1796804 NP_866261.1 CDS RB4712 NC_005027.1 2405757 2406704 D PMID: 97000351 best DB hits: BLAST: embl:CAB61593.1; (AL133210) hypothetical protein SCG11A.12; E=2e-59 pir:T35546; hypothetical protein SC6G3.02 - Streptomyces coelicolor; E=2e-36; hypothetical protein 2405757..2406704 Rhodopirellula baltica SH 1 1792842 NP_866262.1 CDS RB4713 NC_005027.1 2406701 2411998 D PMID: 97000351 best DB hits: BLAST: embl:CAB61594.1; (AL133210) hypothetical protein SCG11A.13; E=1e-63 pir:T35547; hypothetical protein SC6G3.03 - Streptomyces coelicolor; E=1e-25; hypothetical protein 2406701..2411998 Rhodopirellula baltica SH 1 1791408 NP_866263.1 CDS RB4714 NC_005027.1 2412041 2413339 D PMID: 97000351 best DB hits: BLAST: embl:CAB61595.1; (AL133210) hypothetical protein SCG11A.14; E=3e-96 gb:AAG57184.1; AE005439_3 (AE005439) orf, hypothetical protein; E=1e-69 swissprot:P33348; YEHL_ECOLI HYPOTHETICAL 42.4 KD PROTEIN IN; E=3e-69 COG: yehL; COG0714 MoxR-like ATPases; E=3e-70; hypothetical protein 2412041..2413339 Rhodopirellula baltica SH 1 1795147 NP_866264.1 CDS RB4715 NC_005027.1 2413294 2417169 D best DB hits: BLAST: pir:T35548; hypothetical protein SC6G3.04 - Streptomyces coelicolor; E=1e-145 embl:CAB61596.1; (AL133210) hypothetical protein SCG11A.15; E=5e-93 swissprot:P33352; YEHP_ECOLI HYPOTHETICAL 42.1 KD PROTEIN IN; E=5e-27; hypothetical protein 2413294..2417169 Rhodopirellula baltica SH 1 1795371 NP_866265.1 CDS RB4716 NC_005027.1 2416977 2419019 D best DB hits: BLAST: pir:T35549; hypothetical protein SC6G3.05 - Streptomyces coelicolor; E=4e-13; hypothetical protein 2416977..2419019 Rhodopirellula baltica SH 1 1791154 NP_866266.1 CDS RB4719 NC_005027.1 2419112 2419276 R hypothetical protein complement(2419112..2419276) Rhodopirellula baltica SH 1 1794428 NP_866267.1 CDS RB4721 NC_005027.1 2419331 2420059 D best DB hits: BLAST: pir:S77109; hypothetical protein slr1870 - Synechocystis sp. (strain; E=1e-63 pir:D81437; hypothetical protein Cj0189c [imported] - Campylobacter; E=2e-24 pir:C71266; conserved hypothetical protein TP0894 - syphilis; E=8e-20 COG: slr1870; COG1432 Uncharacterized ACR; E=1e-64; hypothetical protein 2419331..2420059 Rhodopirellula baltica SH 1 1794392 NP_866268.1 CDS RB4722 NC_005027.1 2420005 2420253 R hypothetical protein complement(2420005..2420253) Rhodopirellula baltica SH 1 1791226 NP_866269.1 CDS RB4723 NC_005027.1 2420330 2420698 D hypothetical protein 2420330..2420698 Rhodopirellula baltica SH 1 1794742 NP_866270.1 CDS RB4724 NC_005027.1 2420720 2421355 D PMID: 95126562 PMID: 94254732 PMID: 93155125 best DB hits: BLAST: embl:CAC03633.1; (AL391338) TetR-family transcriptional; E=2e-14 pir:E70831; probable transcriptional regulator Rv0452 - Mycobacterium; E=2e-10 pir:E75525; transcriptional regulator, TetR family - Deinococcus; E=8e-08 COG: Rv0452; COG1309 Transcriptional regulator; E=2e-11 PFAM: PF00440; Bacterial regulatory proteins; E=9e-14; TetR family transcriptional regulator 2420720..2421355 Rhodopirellula baltica SH 1 1791589 NP_866271.1 CDS RB4725 NC_005027.1 2421395 2422342 D PMID: 95260797 PMID: 81247357 best DB hits: BLAST: gb:AAG19016.1; (AE005001) probable oxidoreductase; YajO1; E=8e-35 pir:C70863; hypothetical protein Rv2263 - Mycobacterium tuberculosis; E=2e-32 pir:H70829; hypothetical protein Rv0439c - Mycobacterium; E=7e-32 COG: VNG0479G; COG1028 Dehydrogenases with different specificities; E=8e-36 Rv2263; COG1028 Dehydrogenases with different specificities (related; E=1e-33 Rv0439c; COG1028 Dehydrogenases with different specificities; E=7e-33 PFAM: PF00106; short chain dehydrogenase; E=6.1e-26; oxidoreductase yajO1 2421395..2422342 Rhodopirellula baltica SH 1 1792627 NP_866272.1 CDS RB4727 NC_005027.1 2422602 2422766 D hypothetical protein 2422602..2422766 Rhodopirellula baltica SH 1 1795103 NP_866273.1 CDS RB4728 NC_005027.1 2422809 2423843 R PMID: 11410353 PMID: 10627033 PMID: 10496921 PMID: 9001395 best DB hits: BLAST: pir:G71532; probable threoninetyrosine-specific protein kinase (EC; E=1e-25 gb:AAF73573.1; (AE002326) serinethreonine protein kinase; E=5e-22 pir:T36501; probable serinethreonine protein kinase - Streptomyces; E=3e-20 COG: CT301_1; COG0515 Serine/threonine protein kinases; E=1e-26 PFAM: PF02473; Oxygen-independent Coproporphy; E=0.8 PF00069; Protein kinase domain; E=5.9e-29; serine/threonine kinase complement(2422809..2423843) Rhodopirellula baltica SH 1 1793230 NP_866274.1 CDS RB4729 NC_005027.1 2423840 2424757 R signal peptide complement(2423840..2424757) Rhodopirellula baltica SH 1 1795033 NP_866275.1 CDS RB4730 NC_005027.1 2424786 2426309 D hypothetical protein 2424786..2426309 Rhodopirellula baltica SH 1 1791978 NP_866276.1 CDS RB4732 NC_005027.1 2426440 2426946 R PMID: 11466286 PMID: 95337427 PMID: 95218635 best DB hits: BLAST: pir:T36945; hypothetical protein SCJ1.12 - Streptomyces coelicolor; E=0.27 swissprot:P95014; AROK_MYCTU SHIKIMATE KINASE (SK) -----; E=0.40 PFAM: PF01202; Shikimate kinase; E=0.52; shikimate kinase complement(2426440..2426946) Rhodopirellula baltica SH 1 1794209 NP_866277.1 CDS RB4735 NC_005027.1 2427014 2427235 R hypothetical protein complement(2427014..2427235) Rhodopirellula baltica SH 1 1796699 NP_866278.1 CDS RB4736 NC_005027.1 2427190 2427678 D hypothetical protein 2427190..2427678 Rhodopirellula baltica SH 1 1792104 NP_866279.1 CDS fbaB NC_005027.1 2427878 2428978 D catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate; fructose-bisphosphate aldolase 2427878..2428978 Rhodopirellula baltica SH 1 1790651 NP_866280.1 CDS RB4738 NC_005027.1 2429016 2430029 R catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 complement(2429016..2430029) Rhodopirellula baltica SH 1 1792028 NP_866281.1 CDS RB4739 NC_005027.1 2430063 2431604 R PMID: 8905231 best DB hits: BLAST: pir:A83058; conserved hypothetical protein PA4701 [imported] -; E=5e-90 gb:AAF00966.1; AF183408_14 (AF183408) Uma3 [Microcystis; E=1e-87 pir:S76584; hypothetical protein - Synechocystis sp. (strain PCC; E=1e-68 COG: PA4701_1; COG2187 Uncharacterized BCR; E=3e-60 PA4701_2; COG0645 Predicted kinase; E=1e-24 PFAM: PF00277; Serum amyloid A protein; E=0.24 PF01583; Adenylylsulfate kinase; E=0.43; hypothetical protein complement(2430063..2431604) Rhodopirellula baltica SH 1 1795121 NP_866282.1 CDS RB4740 NC_005027.1 2431814 2431966 D hypothetical protein 2431814..2431966 Rhodopirellula baltica SH 1 1790840 NP_866283.1 CDS RB4741 NC_005027.1 2431918 2432364 R signal peptide complement(2431918..2432364) Rhodopirellula baltica SH 1 1797053 NP_866284.1 CDS RB4742 NC_005027.1 2432615 2433589 R PMID: 7542800 best DB hits: BLAST: pir:H82491; conserved hypothetical protein VCA0159 [imported] -; E=2e-29 pir:G64029; hypothetical protein HI1426 - Haemophilus influenzae; E=1e-20 swissprot:P44195; YDAA_HAEIN HYPOTHETICAL PROTEIN HI1426; E=1e-20 COG: VCA0159; COG0589 Universal stress protein UspA and related; E=2e-30 PFAM: PF00582; Universal stress protein family; E=0.0026; hypothetical protein complement(2432615..2433589) Rhodopirellula baltica SH 1 1791857 NP_866285.1 CDS RB4744 NC_005027.1 2433604 2434533 R best DB hits: BLAST: pir:A69220; conserved hypothetical protein MTH898 - Methanobacterium; E=6e-10 gb:AAK05956.1; AE006416_1 (AE006416) conserved hypothetical; E=8e-07 pir:A69233; conserved hypothetical protein MTH993 - Methanobacterium; E=3e-06 COG: MTH898; COG0589 Universal stress protein UspA and related; E=6e-11 PFAM: PF00582; Universal stress protein family; E=5.4e-13; hypothetical protein complement(2433604..2434533) Rhodopirellula baltica SH 1 1795664 NP_866286.1 CDS RB4746 NC_005027.1 2434530 2434712 R hypothetical protein complement(2434530..2434712) Rhodopirellula baltica SH 1 1795807 NP_866287.1 CDS RB4748 NC_005027.1 2435328 2435465 D hypothetical protein 2435328..2435465 Rhodopirellula baltica SH 1 1790464 NP_866288.1 CDS POL4 NC_005027.1 2435456 2436445 R PMID: 90319059 PMID: 94089375 best DB hits: BLAST: ddbj:BAA13425.1; (D87664) DNA polymerase X [Thermus; E=1e-09 embl:CAC11891.1; (AL445065) DNA-dependent DNA polymerase X; E=1e-08 pir:G69172; DNA-dependent DNA polymerase X - Methanobacterium; E=6e-08 COG: Ta0758_1; COG1796 DNA polymerase IV (family X); E=1e-09; DNA polymerase X protein complement(2435456..2436445) Rhodopirellula baltica SH 1 1793372 NP_866289.1 CDS RB4750 NC_005027.1 2435462 2436076 D signal peptide 2435462..2436076 Rhodopirellula baltica SH 1 1792391 NP_866290.1 CDS pyrD NC_005027.1 2436459 2437538 R catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 complement(2436459..2437538) Rhodopirellula baltica SH 1 1797047 NP_866291.1 CDS RB4753 NC_005027.1 2437483 2437713 D hypothetical protein 2437483..2437713 Rhodopirellula baltica SH 1 1793725 NP_866292.1 CDS RB4754 NC_005027.1 2437589 2437765 D hypothetical protein 2437589..2437765 Rhodopirellula baltica SH 1 1793196 NP_866293.1 CDS RB4756 NC_005027.1 2437784 2438053 D best DB hits: BLAST: embl:CAB54060.1; (AJ245436) hypothetical protein, 91.9 kD; E=0.19 pir:A82290; clpB protein VC0711 [imported] - Vibrio cholerae (group; E=0.55 embl:CAB93414.1; (AL357524) integrase [Streptomyces; E=0.64; hypothetical protein 2437784..2438053 Rhodopirellula baltica SH 1 1793773 NP_866294.1 CDS RB4757 NC_005027.1 2438070 2438423 D hypothetical protein 2438070..2438423 Rhodopirellula baltica SH 1 1790171 NP_866295.1 CDS atoS NC_005027.1 2438505 2440034 D PMID: 8346225 best DB hits: BLAST: swissprot:Q06067; ATOS_ECOLI SENSOR PROTEIN ATOS ----- pir:; E=1e-26 gb:AAF33505.1; (AF170176) Salmonella typhimurium sensor protein; E=3e-25 gb:AAG59806.1; AF305914_1 (AF305914) HydH [Klebsiella oxytoca]; E=1e-24 COG: atoS_3; COG0642 Sensory transduction histidine kinases; E=1e-27 PFAM: PF00072; Response regulator receiver doma; E=2.2e-12 PF00989; PAS domain; E=1.6e-06 PF00785; PAC motif; E=0.00084; sensor protein atoS 2438505..2440034 Rhodopirellula baltica SH 1 1795086 NP_866296.1 CDS RB4759 NC_005027.1 2439910 2441166 D PMID: 2046550 PMID: 1766374 best DB hits: BLAST: swissprot:P26489; FIXL_AZOCA SENSOR PROTEIN FIXL ----- pir:; E=2e-48 swissprot:P23222; FIXL_BRAJA SENSOR PROTEIN FIXL ----- pir:; E=8e-45 swissprot:P10955; FIXL_RHIME SENSOR PROTEIN FIXL ----- pir:; E=2e-43 COG: BS_ykrQ_3; COG0642 Sensory transduction histidine kinases; E=3e-27 PFAM: PF00989; PAS domain; E=1.3e-13 PF00785; PAC motif; E=0.052 PF00512; His Kinase A (phosphoacceptor) doma; E=4.1e-09; sensor protein fixL 2439910..2441166 Rhodopirellula baltica SH 1 1793374 NP_866297.1 CDS RB4760 NC_005027.1 2441163 2441921 D PMID: 3003689 PMID: 2997779 best DB hits: BLAST: pdb:1SRR; A Chain A, Crystal Structure Of A Phosphatase Resistant; E=3e-12 swissprot:P06628; SP0F_BACSU SPORULATION INITIATION; E=5e-12 pdb:1F51; E Chain E, A Transient Interaction Between Two; E=8e-12 COG: BS_spo0F; COG0784 CheY-like receiver domains; E=4e-13 PA4381; COG0745 Response regulators consisting of a CheY-like; E=5e-11 rcsC_3; COG0784 CheY-like receiver domains; E=5e-11 PFAM: PF00072; Response regulator receiver doma; E=2.5e-23 PF02310; B12 binding domain; E=0.14 PF00072; Response regulator receiver doma; E=4.8e-08; sporulation initiation phosphotransferase F 2441163..2441921 Rhodopirellula baltica SH 1 1795852 NP_866298.1 CDS RB4763 NC_005027.1 2441926 2442513 R PMID: 9784136 best DB hits: BLAST: pir:H71494; probable thiol-disulfide interchange protein dsbD; E=0.009 pir:H72034; thiol-disulfide interchange protein dsbD [imported] -; E=0.084 pir:G81503; thiol-disulfide interchange protein DSbD homolog CP1086; E=0.084 COG: CT595; COG0526 Thiol-disulfide isomerase and thioredoxins; E=8e-04; thiol-disulfide interchange protein dsbD complement(2441926..2442513) Rhodopirellula baltica SH 1 1797033 NP_866299.1 CDS RB4766 NC_005027.1 2442599 2442991 R signal peptide complement(2442599..2442991) Rhodopirellula baltica SH 1 1790477 NP_866300.1 CDS RB4769 NC_005027.1 2443052 2444524 R hypothetical protein complement(2443052..2444524) Rhodopirellula baltica SH 1 1793879 NP_866301.1 CDS RB4770 NC_005027.1 2444720 2446432 R best DB hits: BLAST: ddbj:BAB06427.1; (AP001516) ABC transporter [Bacillus halodurans]; E=3e-69 pir:H69086; ABC transporter - Methanobacterium thermoautotrophicum; E=2e-66 pir:D83014; conserved hypothetical protein PA5065 [imported] -; E=6e-59 COG: BH2708; COG0661 Predicted unusual protein kinase; E=3e-70; ABC transporter complement(2444720..2446432) Rhodopirellula baltica SH 1 1791181 NP_866302.1 CDS RB4771 NC_005027.1 2446507 2446638 R hypothetical protein complement(2446507..2446638) Rhodopirellula baltica SH 1 1790038 NP_866303.1 CDS RB4772 NC_005027.1 2446610 2446741 D hypothetical protein 2446610..2446741 Rhodopirellula baltica SH 1 1797028 NP_866304.1 CDS RB4773 NC_005027.1 2446723 2447349 D hypothetical protein 2446723..2447349 Rhodopirellula baltica SH 1 1792710 NP_866305.1 CDS RB4775 NC_005027.1 2447336 2448637 D PMID: 2546860 best DB hits: BLAST: pir:JS0237; hypothetical 48K protein - Pseudomonas cepacia -----; E=2e-33 embl:CAA65720.1; (X96995) transposase IS1354 [Methylobacterium; E=7e-13 swissprot:P35880; TRA1_LACHE TRANSPOSASE FOR INSERTION SEQUENCE; E=1e-11 COG: Rv3431c; COG3328 Predicted transposase; E=4e-12 PFAM: PF00872; Transposase, Mutator family; E=1.5e-05; hypothetical protein 2447336..2448637 Rhodopirellula baltica SH 1 1792748 NP_866306.1 CDS RB4777 NC_005027.1 2448693 2449148 D hypothetical protein 2448693..2449148 Rhodopirellula baltica SH 1 1793396 NP_866307.1 CDS RB4778 NC_005027.1 2449078 2449599 D hypothetical protein 2449078..2449599 Rhodopirellula baltica SH 1 1791430 NP_866308.1 CDS RB4781 NC_005027.1 2449655 2450125 D PMID: 99231861 best DB hits: BLAST: swissprot:P18501; HESB_ANASP HESB PROTEIN ----- pir: S11901; E=9e-08 swissprot:P46051; HEB1_ANAVA HESB PROTEIN, HETEROCYST -----; E=1e-07 gb:AAF82645.1; AF167538_12 (AF167538) HesB [Trichodesmium sp.; E=2e-07 COG: NMB1381; COG0316 Uncharacterized ACR; E=5e-07 PFAM: PF01521; HesB-like domain; E=4.9e-21; protein hesB 2449655..2450125 Rhodopirellula baltica SH 1 1792166 NP_866309.1 CDS RB4783 NC_005027.1 2450091 2450273 R hypothetical protein complement(2450091..2450273) Rhodopirellula baltica SH 1 1790787 NP_866310.1 CDS aslA NC_005027.1 2450369 2452069 D PMID: 7910580 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=4e-27 swissprot:P50428; ARSA_MOUSE ARYLSULFATASE A PRECURSOR (ASA); E=4e-22 pdb:1E2S; P Chain P, Crystal Structure Of An Arylsulfatase A; E=6e-22 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=2e-21 PFAM: PF00884; Sulfatase; E=8.8e-25; arylsulfatase 2450369..2452069 Rhodopirellula baltica SH 1 1794739 NP_866311.1 CDS RB4787 NC_005027.1 2452111 2453523 D PMID: 10699374 best DB hits: BLAST: gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=2e-33 ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=1e-32 pdb:1E2S; P Chain P, Crystal Structure Of An Arylsulfatase A; E=4e-31 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=1e-28 PFAM: PF00884; Sulfatase; E=8.8e-45; N-acetylgalactosamine-6-sulfatase 2452111..2453523 Rhodopirellula baltica SH 1 1795040 NP_866312.1 CDS RB4788 NC_005027.1 2453596 2454099 D best DB hits: BLAST: pir:T03939; potassium channel protein - maize ----- embl:; E=0.001 gb:AAF44358.1; AF198100_5 (AF198100) ORF FPV014 Ankyrin repeat; E=0.002 gb:AAF49551.1; (AE003529) CG5841 gene product [Drosophila; E=0.002 COG: TP0502; COG0666 Ankyrin repeat proteins; E=0.003 PFAM: PF00023; Ank repeat; E=8e-07; ankyrin repeat-containing protein 2453596..2454099 Rhodopirellula baltica SH 1 1796634 NP_866313.1 CDS RB4790 NC_005027.1 2454092 2454349 D hypothetical protein 2454092..2454349 Rhodopirellula baltica SH 1 1795396 NP_866314.1 CDS RB4792 NC_005027.1 2454360 2454998 D PMID: 90239044 best DB hits: BLAST: swissprot:O53719; CLPB_MYCTU CLPB PROTEIN ----- pir: C70834; E=0.009 gb:AAD00218.1; (U73653) clpB [Mycobacterium bovis]; E=0.009 swissprot:P53532; CLPB_CORGL CLPB PROTEIN ----- gb: AAB49540.1; E=0.010 COG: Rv0384c; COG0542 ATPases with chaperone activity, ATP-binding domain; E=9e-04 PFAM: PF00225; Kinesin motor domain; E=0.54; hypothetical protein 2454360..2454998 Rhodopirellula baltica SH 1 1794280 NP_866315.1 CDS RB4793 NC_005027.1 2454990 2455157 R hypothetical protein complement(2454990..2455157) Rhodopirellula baltica SH 1 1796598 NP_866316.1 CDS RB4794 NC_005027.1 2455190 2455552 R signal peptide complement(2455190..2455552) Rhodopirellula baltica SH 1 1796149 NP_866317.1 CDS RB4796 NC_005027.1 2455572 2455874 R hypothetical protein complement(2455572..2455874) Rhodopirellula baltica SH 1 1792534 NP_866318.1 CDS RB4797 NC_005027.1 2455910 2456020 R hypothetical protein complement(2455910..2456020) Rhodopirellula baltica SH 1 1791378 NP_866319.1 CDS RB4798 NC_005027.1 2456217 2457056 R hypothetical protein complement(2456217..2457056) Rhodopirellula baltica SH 1 1793990 NP_866320.1 CDS RB4799 NC_005027.1 2457202 2458914 D best DB hits: BLAST: pir:C70893; hypothetical protein Rv1069c - Mycobacterium; E=3e-88; hypothetical protein 2457202..2458914 Rhodopirellula baltica SH 1 1796262 NP_866321.1 CDS RB4800 NC_005027.1 2458911 2459243 D hypothetical protein 2458911..2459243 Rhodopirellula baltica SH 1 1795131 NP_866322.1 CDS RB4801 NC_005027.1 2459212 2459502 R hypothetical protein complement(2459212..2459502) Rhodopirellula baltica SH 1 1795756 NP_866323.1 CDS RB4802 NC_005027.1 2459514 2459687 D hypothetical protein 2459514..2459687 Rhodopirellula baltica SH 1 1792575 NP_866324.1 CDS RB4803 NC_005027.1 2459672 2463133 D signal peptide 2459672..2463133 Rhodopirellula baltica SH 1 1792886 NP_866325.1 CDS RB4804 NC_005027.1 2460683 2461441 R hypothetical protein complement(2460683..2461441) Rhodopirellula baltica SH 1 1790401 NP_866326.1 CDS RB4805 NC_005027.1 2463134 2464603 D hypothetical protein 2463134..2464603 Rhodopirellula baltica SH 1 1790013 NP_866327.1 CDS RB4807 NC_005027.1 2464638 2464883 D hypothetical protein 2464638..2464883 Rhodopirellula baltica SH 1 1797046 NP_866328.1 CDS RB4809 NC_005027.1 2464977 2465273 D signal peptide 2464977..2465273 Rhodopirellula baltica SH 1 1796228 NP_866329.1 CDS RB4810 NC_005027.1 2465418 2465774 R hypothetical protein complement(2465418..2465774) Rhodopirellula baltica SH 1 1790122 NP_866330.1 CDS RB4811 NC_005027.1 2465768 2467084 D PMID: 10531208 best DB hits: BLAST: gb:AAD38020.1; AF148127_1 (AF148127) transposase [Porphyromonas; E=2e-13 ddbj:BAA83477.1; (AB009361) transposase [Porphyromonas; E=3e-13 ddbj:BAA92234.1; (AB031551) transposase [Bacillus subtilis]; E=4e-10 COG: BH0691; COG3385 Predicted transposase; E=4e-10 PFAM: PF01609; Transposase (IS4 family); E=6.2e-08; transposase 2465768..2467084 Rhodopirellula baltica SH 1 1795215 NP_866331.1 CDS RB4812 NC_005027.1 2467011 2467289 D hypothetical protein 2467011..2467289 Rhodopirellula baltica SH 1 1795064 NP_866332.1 CDS RB4813 NC_005027.1 2467394 2467537 D hypothetical protein 2467394..2467537 Rhodopirellula baltica SH 1 1789976 NP_866333.1 CDS RB4814 NC_005027.1 2467537 2467800 D hypothetical protein 2467537..2467800 Rhodopirellula baltica SH 1 1796211 NP_866334.1 CDS RB4815 NC_005027.1 2467814 2469289 R PMID: 2303452 best DB hits: BLAST: embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=1e-46 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=1e-46 pdb:1E2S; P Chain P, Crystal Structure Of An Arylsulfatase A; E=2e-45 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=9e-38 yejM; COG3083 Predicted hydrolase of alkaline phosphatase; E=6e-06 Rv3077; COG3119 Arylsulfatase A and related enzymes; E=1e-04 PFAM: PF00884; Sulfatase; E=3e-48; arylsulphatase A complement(2467814..2469289) Rhodopirellula baltica SH 1 1796870 NP_866335.1 CDS RB4818 NC_005027.1 2469311 2469535 R hypothetical protein complement(2469311..2469535) Rhodopirellula baltica SH 1 1794628 NP_866336.1 CDS RB4819 NC_005027.1 2469488 2469898 D hypothetical protein 2469488..2469898 Rhodopirellula baltica SH 1 1793027 NP_866337.1 CDS RB4823 NC_005027.1 2470119 2470739 D PMID: 12024217; hypothetical protein 2470119..2470739 Rhodopirellula baltica SH 1 1790776 NP_866338.1 CDS RB4825 NC_005027.1 2470807 2471103 D hypothetical protein 2470807..2471103 Rhodopirellula baltica SH 1 1795115 NP_866339.1 CDS RB4826 NC_005027.1 2471205 2472599 D best DB hits: BLAST: gb:AAG18661.1; (AE004971) Vng0021h [Halobacterium sp. NRC-1]; E=4e-23 gb:AAG18694.1; (AE004974) Vng0056h [Halobacterium sp. NRC-1]; E=4e-21 pir:T44318; transposase homolog [imported] - Vibrio cholerae -----; E=3e-16; hypothetical protein 2471205..2472599 Rhodopirellula baltica SH 1 1795520 NP_866340.1 CDS RB4827 NC_005027.1 2472731 2476540 R best DB hits: BLAST: ddbj:BAA22286.1; (D37918) Reverse transcriptase like protein; E=0.011 ddbj:BAA84894.1; (AB024946) orf59 [Escherichia coli]; E=0.011 swissprot:Q47688; YKFC_ECOLI HYPOTHETICAL 43.2 KDA PROTEIN IN; E=0.016 PFAM: PF00078; Reverse transcriptase (RNA-dependent; E=0.24; reverse transcriptase like protein complement(2472731..2476540) Rhodopirellula baltica SH 1 1790933 NP_866341.1 CDS RB4828 NC_005027.1 2476612 2476761 D hypothetical protein 2476612..2476761 Rhodopirellula baltica SH 1 1790111 NP_866342.1 CDS RB4830 NC_005027.1 2476780 2477475 R hypothetical protein complement(2476780..2477475) Rhodopirellula baltica SH 1 1795876 NP_866343.1 CDS RB4831 NC_005027.1 2477634 2478272 R hypothetical protein complement(2477634..2478272) Rhodopirellula baltica SH 1 1790330 NP_866344.1 CDS RB4832 NC_005027.1 2478225 2478443 D hypothetical protein 2478225..2478443 Rhodopirellula baltica SH 1 1792453 NP_866345.1 CDS RB4833 NC_005027.1 2478658 2479119 D hypothetical protein 2478658..2479119 Rhodopirellula baltica SH 1 1794670 NP_866346.1 CDS RB4834 NC_005027.1 2478856 2479062 R best DB hits: BLAST: gb:AAK02211.1; (AE006047) unknown [Pasteurella multocida]; E=0.62 swissprot:P44114; YB26_HAEIN HYPOTHETICAL PROTEIN HI1126 -----; E=0.64; hypothetical protein complement(2478856..2479062) Rhodopirellula baltica SH 1 1796886 NP_866347.1 CDS RB4835 NC_005027.1 2479184 2480371 R PMID: 10382966 PMID: 2110920 best DB hits: BLAST: pir:E72574; probable membrane protein APE1877 - Aeropyrum pernix; E=1e-08 pir:G70414; conserved hypothetical protein aq_1327 - Aquifex; E=3e-07 gb:AAG18926.1; (AE004994) Vng0361c [Halobacterium sp. NRC-1]; E=2e-06 COG: APE1877; COG0705 Uncharacterized membrane protein (homolog of; E=1e-09 PFAM: PF01694; Rhomboid family; E=1e-07; hypothetical protein complement(2479184..2480371) Rhodopirellula baltica SH 1 1796728 NP_866348.1 CDS RB4839 NC_005027.1 2480519 2481142 D hypothetical protein 2480519..2481142 Rhodopirellula baltica SH 1 1791644 NP_866349.1 CDS RB4844 NC_005027.1 2481716 2481868 D hypothetical protein 2481716..2481868 Rhodopirellula baltica SH 1 1792607 NP_866350.1 CDS RB4846 NC_005027.1 2481899 2483977 D PMID: 11932238; signal peptide 2481899..2483977 Rhodopirellula baltica SH 1 1789896 NP_866351.1 CDS RB4850 NC_005027.1 2484018 2484470 D signal peptide 2484018..2484470 Rhodopirellula baltica SH 1 1793858 NP_866352.1 CDS RB4851 NC_005027.1 2484507 2485979 R PMID: 8020961 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=9e-41 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=1e-40 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=5e-35 COG: aslA; COG3119 Arylsulfatase A and related enzymes; E=3e-28 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=0.002 PFAM: PF00884; Sulfatase; E=1.9e-40; N-acetylgalactosamine 6-sulfatase (GALNS) complement(2484507..2485979) Rhodopirellula baltica SH 1 1797037 NP_866353.1 CDS RB4854 NC_005027.1 2486043 2487347 R signal peptide complement(2486043..2487347) Rhodopirellula baltica SH 1 1790381 NP_866354.1 CDS RB4856 NC_005027.1 2487453 2490002 R signal peptide complement(2487453..2490002) Rhodopirellula baltica SH 1 1791036 NP_866355.1 CDS RB4858 NC_005027.1 2490087 2491427 R hypothetical protein complement(2490087..2491427) Rhodopirellula baltica SH 1 1791189 NP_866356.1 CDS RB4859 NC_005027.1 2491429 2491989 R ECF subfamily RNA polymerase sigma factor complement(2491429..2491989) Rhodopirellula baltica SH 1 1796485 NP_866357.1 CDS RB4862 NC_005027.1 2492119 2493468 R PMID: 8843436 best DB hits: BLAST: swissprot:Q37893; VG12_BPB03 PRE-NECK APPENDAGE PROTEIN (LATE; E=0.69; pre-neck appendage protein complement(2492119..2493468) Rhodopirellula baltica SH 1 1795997 NP_866358.1 CDS RB4864 NC_005027.1 2493642 2495009 R PMID: 10567266 best DB hits: BLAST: pir:B82062; conserved hypothetical protein VC2554 [imported] -; E=5e-25 gb:AAF12633.1; AE001826_102 (AE001826) hypothetical protein; E=3e-22 pir:A83139; hypothetical protein PA4065 [imported] - Pseudomonas; E=5e-21 COG: VC2554; COG0577 Predicted permease; E=4e-26 PFAM: PF02687; Predicted permease; E=1.3e-16; hypothetical protein complement(2493642..2495009) Rhodopirellula baltica SH 1 1795270 NP_866359.1 CDS RB4866 NC_005027.1 2495006 2495722 R PMID: 10783239 best DB hits: BLAST: swissprot:P75957; LOLD_ECOLI LIPOPROTEIN RELEASING SYSTEM; E=6e-38 ddbj:BAA35937.1; (D90747) Heterocyst maturation protein (devA); E=6e-38 swissprot:O53899; Y986_MYCTU HYPOTHETICAL ABC TRANSPORTER; E=4e-37 COG: Rv0986; COG1136 ABC-type (unclassified) transport system, ATPase; E=4e-38 PA5503; COG1135 Uncharacterized ABC-type transport system ATPase; E=6e-33 PA4594; COG1136 ABC-type (unclassified) transport system, ATPase; E=8e-33 PFAM: PF00005; ABC transporter; E=9.9e-55; lipoprotein releasing system ATP-binding protein lolD complement(2495006..2495722) Rhodopirellula baltica SH 1 1796151 NP_866360.1 CDS smpB NC_005027.1 2495722 2496354 R binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein complement(2495722..2496354) Rhodopirellula baltica SH 1 1795118 NP_866361.1 CDS RB4868 NC_005027.1 2496444 2497394 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 2496444..2497394 Rhodopirellula baltica SH 1 1796907 NP_866362.1 CDS RB4869 NC_005027.1 2497539 2499143 R PMID: 1356969 best DB hits: BLAST: gb:AAK03155.1; (AE006148) unknown [Pasteurella multocida]; E=6e-39 pir:F65170; hypothetical 58.9K protein (ibpb 3'region) - Escherichia; E=9e-37 gb:AAG58887.1; AE005600_5 (AE005600) transport protein; E=1e-36 COG: yidE; COG2985 Predicted permease; E=8e-38 aq_303; COG1226 Kef-type K+ transport systems, predicted NAD-binding; E=0.003 DR1411; COG0471 Di- and tricarboxylate transporters; E=0.008 PFAM: PF02080; Potassium channel; E=0.067; permease complement(2497539..2499143) Rhodopirellula baltica SH 1 1796526 NP_866363.1 CDS RB4870 NC_005027.1 2499282 2502527 R PMID: 10988064 best DB hits: BLAST: gb:AAG10499.1; AF279106_61 (AF279106) predicted cation efflux system; E=5e-95 pir:A83186; probable RND efflux transporter PA3676 [imported] -; E=2e-75 pir:F82829; acriflavin resistance protein XF0243 [imported] - Xylella; E=1e-71 COG: PA3676; COG0841 Cation/multidrug efflux pump; E=2e-76 PFAM: PF00873; AcrB/AcrD/AcrF family; E=6.1e-05; AcrB/AcrD/AcrF family cation efflux system complement(2499282..2502527) Rhodopirellula baltica SH 1 1790193 NP_866364.1 CDS RB4872 NC_005027.1 2502476 2503966 R PMID: 11206551 best DB hits: BLAST: gb:AAG58620.1; AE005573_3 (AE005573) membrane protein; E=9e-11 swissprot:P37626; YHII_ECOLI HYPOTHETICAL 38.8 KD PROTEIN IN; E=1e-10 pir:G83220; hypothetical protein PA3402 [imported] - Pseudomonas; E=1e-09 COG: yhiI; COG0845 Membrane-fusion protein; E=9e-12 PA2836; COG1566 Multidrug resistance efflux pump; E=2e-04 XF2084; COG0845 Membrane-fusion protein; E=3e-04 PFAM: PF00364; Biotin-requiring enzyme; E=0.14 PF01173; Uncharacterized protein family; E=0.095 PF00529; HlyD family secretion protein; E=2.7e-07; hypothetical protein complement(2502476..2503966) Rhodopirellula baltica SH 1 1790329 NP_866365.1 CDS RB4873 NC_005027.1 2503963 2504829 R PMID: 10049252 best DB hits: BLAST: gb:AAC27752.1; (AF072887) regulator AmrR [Burkholderia; E=2e-04 pir:H83274; probable transcriptional regulator PA2957 [imported] -; E=5e-04 swissprot:Q59431; UIDR_ECOLI UID OPERON REPRESSOR (GUS OPERON; E=0.002 COG: PA2957; COG1309 Transcriptional regulator; E=5e-05 PFAM: PF00440; Bacterial regulatory proteins, tetR; E=1.1e-10; regulator amrR complement(2503963..2504829) Rhodopirellula baltica SH 1 1792336 NP_866366.1 CDS RB4875 NC_005027.1 2504970 2506157 D hypothetical protein 2504970..2506157 Rhodopirellula baltica SH 1 1796576 NP_866367.1 CDS RB4876 NC_005027.1 2505021 2506214 R PMID: 10937442 best DB hits: BLAST: embl:CAA05166.1; (AJ002065) delta-9 desaturase [Spirulina; E=1e-56 gb:AAD00699.1; (U90417) delta 9 acyl-lipid fatty acid desaturase; E=2e-53 gb:AAB61353.1; (U36390) delta-9 desaturase [Synechococcus sp. PCC; E=4e-53 COG: sll0541; COG1398 Fatty-acid desaturase; E=2e-50 PFAM: PF01069; Fatty acid desaturase; E=1.8e-66; delta-9 desaturase complement(2505021..2506214) Rhodopirellula baltica SH 1 1794750 NP_866368.1 CDS RB4877 NC_005027.1 2506310 2507494 D PMID: 1761227 best DB hits: BLAST: swissprot:Q9ZJ12; SYK3_SALTY LYSYL-TRNA SYNTHETASE; E=1e-57 swissprot:P03812; SYK3_ECOLI LYSYL-TRNA SYNTHETASE; E=2e-57 pir:S56383; lysine--tRNA ligase (EC 6.1.1.6) genX - Escherichia coli; E=2e-57 COG: yjeA; COG2269 Truncated, possibly inactive Class II lysyl-tRNA; E=2e-58 DR0372; COG1190 Lysyl-tRNA synthetase class II; E=2e-29 PFAM: PF00152; tRNA synthetases class II (D, K a; E=8.7e-07; lysine--tRNA ligase genX 2506310..2507494 Rhodopirellula baltica SH 1 1794117 NP_866369.1 CDS RB4879 NC_005027.1 2507504 2509108 D PMID: 3822816 PMID: 1390682 best DB hits: BLAST: pir:T05028; nodulin-26-like protein F13C5.80 - Arabidopsis thaliana; E=2e-47 pir:S01444; nodulin-26 precursor - soybean; E=4e-47 swissprot:P08995; NO26_SOYBN NODULIN-26 (N-26) ----- embl:; E=5e-47 COG: PA4034; COG0580 Glycerol uptake facilitator and related permeases; E=2e-25 PFAM: PF00230; Major intrinsic protein; E=6.6e-52; nodulin-26 2507504..2509108 Rhodopirellula baltica SH 1 1791383 NP_866370.1 CDS RB4880 NC_005027.1 2509233 2510837 D PMID: 10809675 best DB hits: BLAST: gb:AAF72520.1; AF248951_1 (AF248951) mucin-desulfating sulfatase; E=4e-65 gb:AAK03766.1; (AE006204) unknown [Pasteurella multocida]; E=8e-34 gb:AAG58881.1; AE005599_13 (AE005599) sulfatase; E=9e-33 COG: yidJ; COG3119 Arylsulfatase A and related enzymes; E=2e-33 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=6e-10 VNG1337C; COG3119 Arylsulfatase A and related enzymes; E=7e-08 PFAM: PF00884; Sulfatase; E=2.4e-75; mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase) 2509233..2510837 Rhodopirellula baltica SH 1 1795752 NP_866371.1 CDS RB4881 NC_005027.1 2511051 2512226 D PMID: 11214968 best DB hits: BLAST: embl:CAB61226.1; (Y17305) hypothetical protein [Bacillus; E=0.092; hypothetical protein 2511051..2512226 Rhodopirellula baltica SH 1 1796469 NP_866372.1 CDS RB4883 NC_005027.1 2512219 2512428 D hypothetical protein 2512219..2512428 Rhodopirellula baltica SH 1 1790709 NP_866373.1 CDS RB4884 NC_005027.1 2512531 2512977 R signal peptide complement(2512531..2512977) Rhodopirellula baltica SH 1 1794909 NP_866374.1 CDS RB4886 NC_005027.1 2513010 2513213 R hypothetical protein complement(2513010..2513213) Rhodopirellula baltica SH 1 1795939 NP_866375.1 CDS hemG NC_005027.1 2513247 2514149 D PMID: 7916647 PMID: 7788523 best DB hits: BLAST: gb:AAA67647.1; (M87049) o181 [Escherichia coli]; E=1e-22 swissprot:P27863; HEMG_ECOLI PROTOPORPHYRINOGEN OXIDASE (PPO); E=2e-22 pir:S30741; hypothetical protein o181 - Escherichia coli; E=4e-22 COG: hemG; COG0716 Flavodoxins; E=2e-23 PFAM: PF00258; Flavodoxin; E=0.00015; protoporphyrinogen oxidase 2513247..2514149 Rhodopirellula baltica SH 1 1796991 NP_866376.1 CDS RB4890 NC_005027.1 2514257 2514418 D hypothetical protein 2514257..2514418 Rhodopirellula baltica SH 1 1790286 NP_866377.1 CDS RB4891 NC_005027.1 2514545 2516491 R PMID: 8188606 PMID: 8188605 best DB hits: BLAST: gb:AAK04193.1; AE006248_1 (AE006248) cadmium efflux ATPase; E=6e-74 pir:T36946; probable cation-transporting ATPase - Streptomyces; E=3e-73 ddbj:BAB07755.1; (AP001520) cadmium-transporting ATPase [Bacillus; E=4e-62 COG: BH4036; COG2217 Cation transport ATPases; E=4e-63 PFAM: PF00122; E1-E2 ATPase; E=9.5e-42 PF00702; haloacid dehalogenase-like hydro; E=2.3e-15; cadmium-transporting ATPase complement(2514545..2516491) Rhodopirellula baltica SH 1 1791867 NP_866378.1 CDS RB4892 NC_005027.1 2516410 2516640 R hypothetical protein complement(2516410..2516640) Rhodopirellula baltica SH 1 1796646 NP_866379.1 CDS glgX NC_005027.1 2516801 2518939 R PMID: 8905231 PMID: 92082464 PMID: 93356744 best DB hits: BLAST: pir:S77094; glycogen operon protein (EC 3.2.1.-) glgX-2 -; E=1e-125 pir:S74546; glycogen operon protein (EC 3.2.1.-) glgX-1 -; E=1e-124 pir:S73088; glycogen operon protein glgX (EC 3.2.1.-) - Sulfolobus; E=1e-113 COG: slr1857; COG1523 Pullulanase and related glycosidases; E=1e-126 DR0464; COG0296 1,4-alpha-glucan branching enzyme; E=7e-17 DR0405; COG1523 Pullulanase and related glycosidases; E=8e-15 PFAM: PF02922; Isoamylase N-terminal domain; E=6.7e-23 PF00128; Alpha amylase, catalytic domai; E=3.3e-17; glycogen operon protein glgX-2 complement(2516801..2518939) Rhodopirellula baltica SH 1 1791442 NP_866380.1 CDS RB4897 NC_005027.1 2518951 2519505 R hypothetical protein complement(2518951..2519505) Rhodopirellula baltica SH 1 1796470 NP_866381.1 CDS RB4900 NC_005027.1 2519567 2520067 R hypothetical protein complement(2519567..2520067) Rhodopirellula baltica SH 1 1796161 NP_866382.1 CDS RB4901 NC_005027.1 2520103 2520741 R hypothetical protein complement(2520103..2520741) Rhodopirellula baltica SH 1 1793497 NP_866383.1 CDS RB4902 NC_005027.1 2520683 2520904 R hypothetical protein complement(2520683..2520904) Rhodopirellula baltica SH 1 1790431 NP_866384.1 CDS RB4903 NC_005027.1 2520925 2523306 D best DB hits: BLAST: pir:S76896; hypothetical protein - Synechocystis sp. (strain PCC; E=0.0 gb:AAK05600.1; AE006381_1 (AE006381) phosphoketolase [Lactococcus; E=0.0 embl:CAB62746.1; (AL133424) hypothetical protein SCF56.01c; E=0.0 COG: slr0453; COG0021 Transketolase; E=0.0; phosphoketolase 2520925..2523306 Rhodopirellula baltica SH 1 1796839 NP_866385.1 CDS RB4904 NC_005027.1 2523288 2523899 D best DB hits: BLAST: embl:CAC10115.1; (AL442165) mutase [Streptomyces; E=5e-37 embl:CAB61320.1; (AL132997) phosphatase [Streptomyces; E=2e-27 pir:G70595; probable entD protein - Mycobacterium tuberculosis; E=6e-21 COG: Rv3214; COG0406 Phosphoglycerate mutase/fructose-2,6-bisphosphatase; E=6e-22 TP0168; COG0588 Phosphoglycerate mutase 1; E=2e-05 aq_1990; COG0406 Phosphoglycerate mutase/fructose-2,6-bisphosphatase; E=6e-05 PFAM: PF00300; Phosphoglycerate mutase; E=6e-19; mutase 2523288..2523899 Rhodopirellula baltica SH 1 1792840 NP_866386.1 CDS atpD NC_005027.1 2524065 2525591 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta 2524065..2525591 Rhodopirellula baltica SH 1 1792730 NP_866387.1 CDS atpC NC_005027.1 2525588 2525983 D part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; ATP synthase F0F1 subunit epsilon 2525588..2525983 Rhodopirellula baltica SH 1 1790145 NP_866388.1 CDS RB4909 NC_005027.1 2525999 2526283 D PMID: 9425287 best DB hits: BLAST: gb:AAC38051.1; (AF028006) ATP synthase gene 1 [Methanosarcina; E=2e-18; ATP synthase gene 1 2525999..2526283 Rhodopirellula baltica SH 1 1795954 NP_866389.1 CDS RB4910 NC_005027.1 2526270 2526617 D PMID: 9425287 best DB hits: BLAST: gb:AAC38052.1; (AF028006) unknown [Methanosarcina barkeri]; E=0.49; hypothetical protein 2526270..2526617 Rhodopirellula baltica SH 1 1794618 NP_866390.1 CDS atpB NC_005027.1 2526614 2527300 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; ATP synthase F0F1 subunit A 2526614..2527300 Rhodopirellula baltica SH 1 1790465 NP_866391.2 CDS RB4913 NC_005027.1 2527382 2527648 D produces ATP from ADP in the presence of a proton gradient across the membrane; subunit C is part of the membrane proton channel F0; ATP synthase F0F1 subunit C 2527382..2527648 Rhodopirellula baltica SH 1 1790160 NP_866392.1 CDS atpF NC_005027.1 2527665 2528405 D PMID: 9425287 best DB hits: BLAST: gb:AAC38055.1; (AF028006) ATP synthase b subunit [Methanosarcina; E=2e-25 ddbj:BAA23684.1; (AB006151) proton-translocating ATPase, b; E=2e-05 swissprot:P21904; ATPF_PROMO ATP SYNTHASE B CHAIN, SODIUM ION; E=5e-04 COG: UU135; COG0711 F0F1-type ATP synthase b subunit; E=1e-04 PFAM: PF00430; ATP synthase B/B' CF(0); E=6.3e-12; ATP synthase subunit B 2527665..2528405 Rhodopirellula baltica SH 1 1790769 NP_866393.2 CDS atpA NC_005027.1 2528481 2530013 D produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha 2528481..2530013 Rhodopirellula baltica SH 1 1795580 NP_866394.1 CDS atpG NC_005027.1 2530000 2530920 D PMID: 9425287 best DB hits: BLAST: gb:AAC38058.1; (AF028006) ATP synthase gamma subunit C-terminus; E=7e-27 gb:AAC38057.1; (AF028006) ATP synthase gamma subunit N-terminus; E=1e-13 swissprot:P00837; ATPG_ECOLI ATP SYNTHASE GAMMA CHAIN -----; E=2e-13 COG: atpG; COG0224 F0F1-type ATP synthase gamma subunit; E=2e-14 PFAM: PF00231; ATP synthase; E=3.3e-07; ATP synthase subunit gamma 2530000..2530920 Rhodopirellula baltica SH 1 1793649 NP_866395.1 CDS RB4918 NC_005027.1 2530971 2531129 R hypothetical protein complement(2530971..2531129) Rhodopirellula baltica SH 1 1796658 NP_866396.1 CDS RB4919 NC_005027.1 2531133 2531654 D signal peptide 2531133..2531654 Rhodopirellula baltica SH 1 1790804 NP_866397.1 CDS RB4920 NC_005027.1 2531641 2531850 R hypothetical protein complement(2531641..2531850) Rhodopirellula baltica SH 1 1793630 NP_866398.1 CDS RB4921 NC_005027.1 2531934 2532635 D PMID: 12004073; hypothetical protein 2531934..2532635 Rhodopirellula baltica SH 1 1791665 NP_866399.1 CDS RB4923 NC_005027.1 2532667 2533638 R PMID: 7704254 best DB hits: BLAST: swissprot:P42243; YCBK_BACSU HYPOTHETICAL 34.0 KD PROTEIN IN; E=6e-13 pir:B75194; hypothetical protein PAB0040 - Pyrococcus abyssi (strain; E=1e-06 swissprot:O31540; YETK_BACSU HYPOTHETICAL 35.8 KD PROTEIN IN; E=2e-06 COG: BS_ycbK; COG0697 Predicted permeases; E=5e-14 PFAM: PF00892; Integral membrane protein DUF6; E=5.5e-10; permease complement(2532667..2533638) Rhodopirellula baltica SH 1 1791984 NP_866400.1 CDS RB4924 NC_005027.1 2533635 2533763 R hypothetical protein complement(2533635..2533763) Rhodopirellula baltica SH 1 1791144 NP_866401.1 CDS RB4925 NC_005027.1 2533826 2534719 R PMID: 86039802 PMID: 97439408 best DB hits: BLAST: swissprot:Q9ZLH2; RNC_HELPJ RIBONUCLEASE III (RNASE III) -----; E=3e-26 pir:F64602; ribonuclease III - Helicobacter pylori (strain 26695); E=3e-26 swissprot:P56118; RNC_HELPY RIBONUCLEASE III (RNASE III); E=3e-26 COG: jhp0607; COG0571 dsRNA-specific ribonuclease; E=3e-27 PFAM: PF00636; RNase3 domain.; E=1.2e-26 PF00035; Double-stranded RNA binding mo; E=3.9e-21; ribonuclease III complement(2533826..2534719) Rhodopirellula baltica SH 1 1796424 NP_866402.1 CDS RB4927 NC_005027.1 2534735 2534941 D hypothetical protein 2534735..2534941 Rhodopirellula baltica SH 1 1796689 NP_866403.1 CDS RB4928 NC_005027.1 2534999 2537350 D PMID: 7934828 PMID: 1806041 PMID: 8665903 PMID: 2503378 best DB hits: BLAST: pir:G82759; hypothetical protein XF0820 [imported] - Xylella; E=5e-18 ddbj:BAA31158.1; (AB015725) aminopeptidase [Aeromonas caviae]; E=5e-11 ddbj:BAB07580.1; (AP001520) aminopeptidase [Bacillus halodurans]; E=1e-10 COG: XF0820; COG2234 Predicted aminopeptidases; E=5e-19 PFAM: PF02225; PA domain; E=0.0063 PF00595; PDZ domain (Also known as DHR o; E=1.1e-07; aminopeptidase 2534999..2537350 Rhodopirellula baltica SH 1 1790210 NP_866404.1 CDS RB4931 NC_005027.1 2537481 2538134 D PMID: 12093901; signal peptide 2537481..2538134 Rhodopirellula baltica SH 1 1796581 NP_866405.1 CDS RB4933 NC_005027.1 2538155 2538301 D hypothetical protein 2538155..2538301 Rhodopirellula baltica SH 1 1793517 NP_866406.1 CDS lpxC NC_005027.1 2538298 2539206 D zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2538298..2539206 Rhodopirellula baltica SH 1 1796487 NP_866407.1 CDS lpxA NC_005027.1 2539280 2540089 D catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 2539280..2540089 Rhodopirellula baltica SH 1 1791935 NP_866408.1 CDS RB4937 NC_005027.1 2540086 2541195 D PMID: 8905231 best DB hits: BLAST: pir:S76068; hypothetical protein - Synechocystis sp. (strain PCC; E=3e-23 pir:H69216; 3-chlorobenzoate-3,4-dioxygenase dyhydrogenase related; E=3e-22 pir:E75096; NADH-dependent dehydrogenase homolog. PAB0775 -; E=9e-16 COG: slr0338; COG0673 Predicted dehydrogenases and related proteins; E=3e-24 PFAM: PF02871; NAD/NADP octopine/nopaline deh; E=0.21 PF01113; Dihydrodipicolinate reductase; E=0.045 PF00547; Urease, gamma subunit; E=0.84; NADH-dependent dehydrogenase 2540086..2541195 Rhodopirellula baltica SH 1 1797080 NP_866409.1 CDS RB4938 NC_005027.1 2541358 2541525 D signal peptide 2541358..2541525 Rhodopirellula baltica SH 1 1796741 NP_866410.1 CDS RB4940 NC_005027.1 2541555 2542262 D hypothetical protein 2541555..2542262 Rhodopirellula baltica SH 1 1791115 NP_866411.1 CDS RB4941 NC_005027.1 2541619 2542140 D hypothetical protein 2541619..2542140 Rhodopirellula baltica SH 1 1796742 NP_866412.1 CDS ppc NC_005027.1 2542159 2544972 D PMID: 9244286 best DB hits: BLAST: pir:F75415; phosphoenolpyruvate carboxylase - Deinococcus; E=2e-92 swissprot:O32483; CAPP_RHOPA PHOSPHOENOLPYRUVATE CARBOXYLASE; E=3e-92 swissprot:P28594; CAPP_ANASP PHOSPHOENOLPYRUVATE CARBOXYLASE; E=4e-89 COG: DR1283; COG2352 Phosphoenolpyruvate carboxylase; E=2e-93 PFAM: PF00311; Phosphoenolpyruvate carboxylase; E=1.2e-15; phosphoenolpyruvate carboxylase 2542159..2544972 Rhodopirellula baltica SH 1 1791970 NP_866413.1 CDS RB4945 NC_005027.1 2544949 2546421 R hypothetical protein complement(2544949..2546421) Rhodopirellula baltica SH 1 1792270 NP_866414.1 CDS RB4949 NC_005027.1 2546436 2547455 D hypothetical protein 2546436..2547455 Rhodopirellula baltica SH 1 1792458 NP_866415.1 CDS RB4951 NC_005027.1 2547498 2547785 D hypothetical protein 2547498..2547785 Rhodopirellula baltica SH 1 1793042 NP_866416.1 CDS RB4954 NC_005027.1 2547861 2548361 D PMID: 9359865 PMID: 10632710 PMID: 9389475 best DB hits: BLAST: gb:AAB89512.1; (AE000983) conserved hypothetical protein; E=0.006 gb:AAC26855.1; (AF069951) 5'-adenylylsulfate reductase; E=0.069 swissprot:P80579; THIO_ALIAC THIOREDOXIN (TRX) ----- pdb: 1QUW; E=0.32 COG: AF1737; COG1331 Highly conserved protein containing a thioredoxin; E=6e-04; thioredoxin 2547861..2548361 Rhodopirellula baltica SH 1 1796999 NP_866417.1 CDS RB4957 NC_005027.1 2548380 2548553 D hypothetical protein 2548380..2548553 Rhodopirellula baltica SH 1 1796426 NP_866418.1 CDS RB4958 NC_005027.1 2548531 2549283 R PMID: 9171404 best DB hits: BLAST: ddbj:BAA14001.1; (D89626) adenylate cyclase [Anabaena sp.]; E=0.018 pir:S75331; penicillin-binding protein 1B mrcB - Synechocystis sp.; E=0.10 ddbj:BAB11326.1; (AB016886) gene_id:MCA23.11~unknown protein; E=0.14 COG: slr1710; COG0744 Membrane carboxypeptidase (penicillin-binding; E=0.010 PFAM: PF02590; Uncharacterized ACR, COG1576; E=0.23 PF00498; FHA domain; E=1.6e-09; adenylate cyclase complement(2548531..2549283) Rhodopirellula baltica SH 1 1796629 NP_866419.1 CDS RB4960 NC_005027.1 2549270 2550379 D best DB hits: BLAST: ddbj:BAB07003.1; (AP001518) BH3284~unknown conserved protein; E=2e-51 pir:D69999; conserved hypothetical protein ytqA - Bacillus subtilis; E=3e-48 gb:AAK06364.1; AE006455_10 (AE006455) HYPOTHETICAL PROTEIN; E=1e-46 COG: BH3284; COG1242 Uncharacterized FeS oxidoreductases; E=2e-52 MJ1136; COG1243 ELP3 component of the RNA polymerase II complex,; E=2e-07 BS_hemN; COG0635 Coproporphyrinogen III oxidase and related FeS; E=2e-05; hypothetical protein 2549270..2550379 Rhodopirellula baltica SH 1 1796594 NP_866420.1 CDS RB4961 NC_005027.1 2550408 2551148 R hypothetical protein complement(2550408..2551148) Rhodopirellula baltica SH 1 1790669 NP_866421.1 CDS RB4963 NC_005027.1 2551241 2551417 D hypothetical protein 2551241..2551417 Rhodopirellula baltica SH 1 1790014 NP_866422.1 CDS RB4965 NC_005027.1 2551466 2552083 D signal peptide 2551466..2552083 Rhodopirellula baltica SH 1 1790936 NP_866423.1 CDS RB4966 NC_005027.1 2552057 2552311 R hypothetical protein complement(2552057..2552311) Rhodopirellula baltica SH 1 1796427 NP_866424.1 CDS RB4967 NC_005027.1 2552650 2553402 R PMID: 97000351 best DB hits: BLAST: embl:CAB90984.1; (AL355832) deoR-family transcriptional; E=3e-15 gb:AAD15248.1; (L37338) repressor [Streptomyces; E=3e-14 ddbj:BAB05608.1; (AP001513) BH1889~unknown conserved protein; E=3e-10 COG: BH1889; COG2378 Predicted transcriptional regulator; E=3e-11 PFAM: PF00455; Bacterial regulatory proteins, deoR; E=0.0029 PF01022; Bacterial regulatory protein, arsR f; E=0.12; DeoR family transcriptional regulator complement(2552650..2553402) Rhodopirellula baltica SH 1 1790342 NP_866425.1 CDS ephA NC_005027.1 2553479 2554474 D PMID: 20435850 best DB hits: BLAST: pir:B70957; probable ephA protein - Mycobacterium tuberculosis; E=1e-57 gb:AAG14967.1; AF233335_1 (AF233335) soluble epoxide hydrolase; E=7e-44 gb:AAG23251.1; AF311103_2 (AF311103) cytosolic epoxide hydrolase; E=8e-44 COG: Rv3617; COG0596 Predicted hydrolases or acyltransferases (alpha/beta; E=1e-58 BS_yfhM; COG0596 Predicted hydrolases or acyltransferases; E=8e-27 DR2549; COG0596 Predicted hydrolases or acyltransferases (alpha/beta; E=2e-23 PFAM: PF00561; alpha/beta hydrolase fold; E=2.5e-23; hypothetical protein 2553479..2554474 Rhodopirellula baltica SH 1 1793783 NP_866426.1 CDS RB4969 NC_005027.1 2554443 2555447 D best DB hits: PFAM: PF00189; Ribosomal protein S3, C-termin; E=0.66; hypothetical protein 2554443..2555447 Rhodopirellula baltica SH 1 1796697 NP_866427.1 CDS RB4971 NC_005027.1 2555106 2557070 R PMID: 97000351 best DB hits: BLAST: embl:CAB71254.1; (AL138598) hypothetical protein SC1A2.16c.; E=3e-16 embl:CAB95448.1; (AL359782) hypothetical protein, CHR1.152; E=9e-08; hypothetical protein complement(2555106..2557070) Rhodopirellula baltica SH 1 1792516 NP_866428.1 CDS RB4972 NC_005027.1 2557220 2557390 D hypothetical protein 2557220..2557390 Rhodopirellula baltica SH 1 1796369 NP_866429.1 CDS RB4973 NC_005027.1 2557462 2557839 R hypothetical protein complement(2557462..2557839) Rhodopirellula baltica SH 1 1791700 NP_866430.1 CDS RB4974 NC_005027.1 2557884 2558144 R hypothetical protein complement(2557884..2558144) Rhodopirellula baltica SH 1 1791817 NP_866431.1 CDS RB4975 NC_005027.1 2557936 2558115 D hypothetical protein 2557936..2558115 Rhodopirellula baltica SH 1 1791259 NP_866432.1 CDS RB4977 NC_005027.1 2558245 2559300 D hypothetical protein 2558245..2559300 Rhodopirellula baltica SH 1 1796090 NP_866433.1 CDS RB4980 NC_005027.1 2559335 2559508 R hypothetical protein complement(2559335..2559508) Rhodopirellula baltica SH 1 1796879 NP_866434.1 CDS RB4981 NC_005027.1 2559627 2560415 D PMID: 8759840 best DB hits: BLAST: pir:E70027; probable 3-oxoacyl-[acyl-carrier-protein] reductase (EC; E=3e-75 pir:H83476; probable short-chain dehydrogenase PA1344 [imported] -; E=2e-60 pir:H70046; probable 3-oxoacyl-[acyl-carrier-protein] reductase (EC; E=1e-53 COG: BS_yvaG; COG1028 Dehydrogenases with different specificities; E=3e-76 PA1344; COG1028 Dehydrogenases with different specificities (related; E=2e-61 BS_yvrD; COG1028 Dehydrogenases with different specificities; E=1e-54 PFAM: PF00106; short chain dehydrogenase; E=5.1e-48 PF00678; Short chain dehydrogenase/reduct; E=3.4e-06; 3-oxoacyl-ACP reductase 2559627..2560415 Rhodopirellula baltica SH 1 1793889 NP_866435.1 CDS RB4982 NC_005027.1 2560457 2561305 D best DB hits: BLAST: ddbj:BAB04024.1; (AP001508) BH0305~unknown conserved protein in; E=1e-29 gb:AAG59409.1; AE005653_10 (AE005653) oxidoreductase; E=1e-26 swissprot:P39315; YTFG_ECOLI HYPOTHETICAL 29.7 KD PROTEIN IN; E=3e-26 COG: BH0305; COG0702 Predicted nucleoside-diphosphate-sugar epimerases; E=1e-30 PFAM: PF01073; 3-beta hydroxysteroid dehydrogenase; E=0.1; oxidoreductase 2560457..2561305 Rhodopirellula baltica SH 1 1790478 NP_866436.1 CDS RB4983 NC_005027.1 2561302 2561424 D hypothetical protein 2561302..2561424 Rhodopirellula baltica SH 1 1795624 NP_866437.1 CDS RB4984 NC_005027.1 2561395 2562546 R PMID: 11016950 best DB hits: BLAST: pir:F82096; conserved hypothetical protein VC2282 [imported] -; E=7e-56 pir:T44958; hypothetical protein [imported] - Natronomonas pharaonis; E=6e-55 gb:AAG20249.1; (AE005100) succinate dehydrogenase subunit; Sdh; E=3e-21 COG: VC2282; COG2988 Succinylglutamate desuccinylase; E=7e-57; succinate dehydrogenase subunit complement(2561395..2562546) Rhodopirellula baltica SH 1 1794201 NP_866438.1 CDS RB4985 NC_005027.1 2562613 2562822 R hypothetical protein complement(2562613..2562822) Rhodopirellula baltica SH 1 1790835 NP_866439.1 CDS RB4987 NC_005027.1 2563201 2563728 D signal peptide 2563201..2563728 Rhodopirellula baltica SH 1 1794252 NP_866440.1 CDS RB4988 NC_005027.1 2563689 2563886 D signal peptide 2563689..2563886 Rhodopirellula baltica SH 1 1790821 NP_866441.1 CDS RB4989 NC_005027.1 2563777 2565093 D PMID: 9872454 best DB hits: BLAST: ddbj:BAB08360.1; (AB015475) Ta11-like non-LTR retroelement; E=0.40 PFAM: PF00114; Pilin (bacterial filament); E=0.014; Ta11-like non-LTR retroelement protein-like 2563777..2565093 Rhodopirellula baltica SH 1 1791306 NP_866442.1 CDS RB4990 NC_005027.1 2564029 2565093 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.014; signal peptide 2564029..2565093 Rhodopirellula baltica SH 1 1792987 NP_866443.1 CDS RB4991 NC_005027.1 2565084 2565503 D signal peptide 2565084..2565503 Rhodopirellula baltica SH 1 1790975 NP_866444.1 CDS RB4992 NC_005027.1 2565522 2566862 D signal peptide 2565522..2566862 Rhodopirellula baltica SH 1 1797082 NP_866445.1 CDS RB4993 NC_005027.1 2566796 2567881 R PMID: 11679669; signal peptide complement(2566796..2567881) Rhodopirellula baltica SH 1 1795887 NP_866446.1 CDS RB4994 NC_005027.1 2567983 2569284 R PMID: 8063417 best DB hits: BLAST: pir:C83500; probable two-component sensor PA1158 [imported] -; E=6e-33 gb:AAG56596.1; AE005384_6 (AE005384) sensor histidine protein; E=2e-27 swissprot:P18392; RSTB_ECOLI SENSOR PROTEIN RSTB ----- pir:; E=2e-27 COG: PA1158; COG0642 Sensory transduction histidine kinases; E=6e-34 PFAM: PF00672; HAMP domain; E=8.4e-08 PF00512; His Kinase A (phosphoacceptor) doma; E=1.1e-15 PF02518; Histidine kinase-, DNA gyrase B-, p; E=1.2e-31; osmolarity sensor protein envZ complement(2567983..2569284) Rhodopirellula baltica SH 1 1791137 NP_866447.1 CDS ribH NC_005027.1 2569371 2569838 R PMID: 8969176 PMID: 11237620 best DB hits: BLAST: pir:H83140; 6,7-dimethyl-8-ribityllumazine synthase PA4053; E=8e-21 pir:C82741; 6,7-dimethyl-8-ribityllumazine synthase XF0954; E=2e-20 gb:AAK02815.1; (AE006110) RibH [Pasteurella multocida]; E=4e-19 COG: PA4053; COG0054 Riboflavin synthase beta-chain; E=7e-22 PFAM: PF00885; 6,7-dimethyl-8-ribityllumazine; E=1.3e-34; 6,7-dimethyl-8-ribityllumazine synthase complement(2569371..2569838) Rhodopirellula baltica SH 1 1796961 NP_866448.1 CDS rho NC_005027.1 2569897 2571441 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(2569897..2571441) Rhodopirellula baltica SH 1 1796957 NP_866449.1 CDS alkA NC_005027.1 2571627 2572250 R PMID: 8921872 PMID: 91092284 PMID: 89024568 best DB hits: BLAST: pir:T08409; DNA-3-methyladenine glycosidase I homolog F18B3.160 -; E=9e-20 gb:AAD39589.1; AC007858_3 (AC007858) This gene is a member of PF; E=2e-19 ddbj:BAB05468.1; (AP001513) DNA-3-methyladenine glycosidase; E=4e-19 COG: BH1749; COG0122 3-Methyladenine DNA glycosylase; E=4e-20; DNA-3-methyladenine glycosidase complement(2571627..2572250) Rhodopirellula baltica SH 1 1796118 NP_866450.1 CDS RB5001 NC_005027.1 2572354 2572665 D hypothetical protein 2572354..2572665 Rhodopirellula baltica SH 1 1790972 NP_866451.1 CDS RB5003 NC_005027.1 2572662 2574158 D PMID: 8062823 PMID: 96214991 PMID: 8062822 best DB hits: BLAST: swissprot:P72935; YA17_SYNY3 AMMONIUM TRANSPORTER SLL1017; E=1e-70 gb:AAF15904.1; AF208160_1 (AF208160) high affinity ammonium; E=1e-56 swissprot:P54147; Y108_SYNY3 AMMONIUM TRANSPORTER SLL0108; E=1e-55 COG: sll1017; COG0004 Ammonia permeases; E=1e-71 PFAM: PF00909; Ammonium Transporter Family; E=7.6e-157; high affinity ammonium transporter 2572662..2574158 Rhodopirellula baltica SH 1 1796962 NP_866452.1 CDS glnB NC_005027.1 2574383 2574859 D PMID: 1702507 best DB hits: BLAST: pir:A72380; nitrogen regulatory protein P-II - Thermotoga maritima; E=4e-21 swissprot:P21193; GLNB_AZOBR NITROGEN REGULATORY PROTEIN P-II; E=8e-17 embl:CAA63238.1; (X92496) PII-like protein Pz [Azospirillum; E=1e-16 COG: TM0403; COG0347 Nitrogen regulatory protein PII; E=4e-22 PFAM: PF00543; Nitrogen regulatory protein P-II; E=2.7e-27; nitrogen regulatory protein P-II 2574383..2574859 Rhodopirellula baltica SH 1 1796958 NP_866453.1 CDS axeA NC_005027.1 2574916 2575812 D PMID: 10473406 PMID: 9274014 best DB hits: BLAST: pir:T05414; protein kinase homolog F28A23.20 - Arabidopsis thaliana; E=9e-17 gb:AAG36766.1; AF180369_1 (AF180369) acetyl xylan esterase AxeA; E=3e-14 pir:T47558; hypothetical protein F8J2.180 - Arabidopsis thaliana; E=5e-13; acetyl xylan esterase AxeA 2574916..2575812 Rhodopirellula baltica SH 1 1790739 NP_866454.1 CDS RB5008 NC_005027.1 2575757 2576944 D best DB hits: PFAM: PF00150; Cellulase (glycosyl hydrolase famil; E=0.26; signal peptide 2575757..2576944 Rhodopirellula baltica SH 1 1790839 NP_866455.1 CDS RB5010 NC_005027.1 2576877 2577161 R 50S ribosomal protein L28 complement(2576877..2577161) Rhodopirellula baltica SH 1 1791764 NP_866456.1 CDS RB5011 NC_005027.1 2577047 2578327 D PMID: 9324248 best DB hits: BLAST: gb:AAD04192.1; (U63813) lichenase [Orpinomyces sp. PC-2]; E=0.16 pir:A36910; xylanase, beta(1,3-1,4)-glucanase - Ruminococcus; E=0.25 swissprot:Q53317; XYND_RUMFL XYLANASEBETA-GLUCANASE PRECURSOR; E=0.25; lichenase 2577047..2578327 Rhodopirellula baltica SH 1 1795796 NP_866457.1 CDS RB5012 NC_005027.1 2578275 2578493 D hypothetical protein 2578275..2578493 Rhodopirellula baltica SH 1 1790236 NP_866458.1 CDS rimI NC_005027.1 2578474 2579178 R PMID: 2828880 best DB hits: BLAST: pir:B70351; ribosomal-protein-alanine acetyltransferase - Aquifex; E=1e-11 pir:G69233; N-terminal acetyltransferase complex, subunit ARD1 -; E=3e-10 pir:S56597; peptide N-acetyltransferase (EC 2.3.1.-) rimI -; E=2e-09 COG: aq_567; COG0456 Acetyltransferases; E=1e-12 Ta0455; COG0454 Histone acetyltransferase HPA2 and related; E=2e-05 VC0657; COG0456 Acetyltransferases; E=2e-05 PFAM: PF00583; Acetyltransferase (GNAT) family; E=6e-23; ribosomal-protein-alanine acetyltransferase complement(2578474..2579178) Rhodopirellula baltica SH 1 1793688 NP_866459.1 CDS RB5016 NC_005027.1 2579226 2579933 R PMID: 9792656 PMID: 9791168 best DB hits: BLAST: gb:AAC69683.1; (AF019747) beta1,4-galactosyltransferase; E=0.76; beta-1,4-galactosyltransferase waaX complement(2579226..2579933) Rhodopirellula baltica SH 1 1794547 NP_866460.1 CDS RB5019 NC_005027.1 2579923 2581296 R best DB hits: PFAM: PF00535; Glycosyl transferase; E=0.00033; hypothetical protein complement(2579923..2581296) Rhodopirellula baltica SH 1 1792289 NP_866461.1 CDS RB5022 NC_005027.1 2581306 2581773 R hypothetical protein complement(2581306..2581773) Rhodopirellula baltica SH 1 1791727 NP_866462.1 CDS RB5025 NC_005027.1 2581935 2583452 D PMID: 11466286 best DB hits: BLAST: pir:T08153; cysteine proteinase (EC 3.4.22.-) - Volvox carteri f.; E=0.003 pir:H71456; probable pyrolysin (EC 3.4.-.-) homolog PH0310; E=0.021 pir:C75015; probable pyrolysin (EC 3.4.-.-) homolog PAB1252; E=0.024 PFAM: PF00112; Papain family cysteine protease; E=0.071; cysteine proteinase 2581935..2583452 Rhodopirellula baltica SH 1 1792903 NP_866463.1 CDS RB5028 NC_005027.1 2583453 2588894 R PMID: 8969512 best DB hits: BLAST: pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=6e-44 swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=1e-37 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=3e-37 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=6e-45 PFAM: PF00069; Protein kinase domain; E=1.5e-45 PF00004; ATPase associated with vari; E=0.14 PF00005; ABC transporter; E=0.082; serine/threonine-protein kinase pknB complement(2583453..2588894) Rhodopirellula baltica SH 1 1791222 NP_866464.1 CDS RB5029 NC_005027.1 2589034 2589744 R best DB hits: BLAST: embl:CAC11769.1; (AL445064) conserved hypothetical protein; E=9e-08 pir:F70426; conserved hypothetical protein aq_1457 - Aquifex; E=4e-07 embl:CAB88946.1; (AL353863) methyltransferase; E=7e-07 COG: Ta0630; COG0500 SAM-dependent methyltransferases; E=9e-09 VC0083; COG2226 Methylase involved in ubiquinone/menaquinone; E=2e-05 aq_262; COG0500 SAM-dependent methyltransferases; E=1e-04; methyltransferase complement(2589034..2589744) Rhodopirellula baltica SH 1 1791576 NP_866465.1 CDS RB5031 NC_005027.1 2589750 2590541 R best DB hits: BLAST: pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=0.005; signal peptide complement(2589750..2590541) Rhodopirellula baltica SH 1 1790995 NP_866466.1 CDS RB5034 NC_005027.1 2590570 2590731 D hypothetical protein 2590570..2590731 Rhodopirellula baltica SH 1 1790940 NP_866467.1 CDS RB5035 NC_005027.1 2590674 2590973 R hypothetical protein complement(2590674..2590973) Rhodopirellula baltica SH 1 1793137 NP_866468.1 CDS RB5036 NC_005027.1 2590789 2590959 D hypothetical protein 2590789..2590959 Rhodopirellula baltica SH 1 1796668 NP_866469.1 CDS maoC NC_005027.1 2590997 2591572 D PMID: 9389475 best DB hits: BLAST: gb:AAB91035.1; (AE001092) monoamine oxidase regulatory protein,; E=0.026 embl:CAC23410.1; (AL512967) hypothetical monoamine oxidase; E=0.056 gb:AAB88943.1; (AE000944) maoC protein (maoC) [Archaeoglobus; E=0.095 COG: AF0198; COG2030 Monoamine oxidase; E=0.002 PFAM: PF01575; MaoC like domain; E=5.8e-07; monoamine oxidase regulatory protein 2590997..2591572 Rhodopirellula baltica SH 1 1792489 NP_866470.1 CDS betA NC_005027.1 2591619 2593115 R PMID: 92177421 best DB hits: BLAST: pir:C75453; GMC oxidoreductase - Deinococcus radiodurans (strain R1); E=9e-35 swissprot:Q00593; ALKJ_PSEOL ALCOHOL DEHYDROGENASE [ACCEPTOR]; E=3e-28 embl:CAB51051.1; (AJ233397) alcohol dehydrogenase [Pseudomonas; E=3e-25 COG: DR0965; COG2303 Choline dehydrogenase and related flavoproteins; E=9e-36 PFAM: PF01494; FAD binding domain; E=0.085 PF00732; GMC oxidoreductases; E=2.3e-09 PF01583; Adenylylsulfate kinase; E=0.85; GMC oxidoreductase complement(2591619..2593115) Rhodopirellula baltica SH 1 1790981 NP_866471.1 CDS RB5042 NC_005027.1 2593112 2593915 R PMID: 9371463 best DB hits: BLAST: pir:D69036; conserved hypothetical protein MTH1267 -; E=2e-14 pir:B75083; probable hydroxyacylglutathione hydrolase (EC 3.1.2.6); E=5e-10 pir:F71229; hypothetical protein PH0096 - Pyrococcus horikoshii; E=6e-07 COG: MTH1267; COG0491 Zn-dependent hydrolases, including glyoxylases; E=1e-15 PFAM: PF00753; Metallo-beta-lactamase superfamil; E=1.5e-30; glyoxalase complement(2593112..2593915) Rhodopirellula baltica SH 1 1791198 NP_866472.1 CDS RB5043 NC_005027.1 2593842 2595677 D PMID: 8905231 best DB hits: BLAST: pir:S76683; hypothetical protein - Synechocystis sp. (strain PCC; E=7e-25 COG: slr0625; COG0786 Na+/glutamate symporter; E=7e-26; Na+/glutamate symporter 2593842..2595677 Rhodopirellula baltica SH 1 1791212 NP_866473.1 CDS RB5050 NC_005027.1 2595813 2597426 D PMID: 9371463 best DB hits: BLAST: swissprot:O26742; PUR1_METTH AMIDOPHOSPHORIBOSYLTRANSFERASE; E=6e-54 gb:AAG19793.1; (AE005064) amidophosphoribosyl-pyrophosphate; E=2e-53 gb:AAB90366.1; (AE001044) amidophosphoribosyltransferase (purF); E=2e-52 COG: MTH646; COG0034 Glutamine phosphoribosylpyrophosphate; E=5e-55 purF; COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase; E=5e-37 TM1247; COG0034 Glutamine phosphoribosylpyrophosphate; E=2e-36 PFAM: PF00310; Glutamine amidotransferases c; E=1.8e-22 PF00156; Phosphoribosyl transferase do; E=3.2e-08; amidophosphoribosyltransferase 2595813..2597426 Rhodopirellula baltica SH 1 1791141 NP_866474.1 CDS RB5051 NC_005027.1 2597495 2598625 R PMID: 10086841 best DB hits: BLAST: ddbj:BAB05342.1; (AP001512) BH1623~unknown conserved protein; E=9e-40 swissprot:P50736; YPDA_BACSU HYPOTHETICAL 36.3 KD PROTEIN IN; E=1e-38 pir:B75252; conserved hypothetical protein - Deinococcus radiodurans; E=5e-25 COG: BH1623; COG0492 Thioredoxin reductase/alkyl hydroperoxide reductase; E=9e-41 BH3677; COG2072 Predicted flavoprotein involved in K+ transport; E=2e-06 BS_yumC; COG0492 Thioredoxin reductase/alkyl hydroperoxide reductase; E=4e-05 PFAM: PF01494; FAD binding domain; E=0.0024 PF01266; D-amino acid oxidase; E=0.43 PF00070; Pyridine nucleotide-disulphide; E=3.5e-15; thioredoxin reductase complement(2597495..2598625) Rhodopirellula baltica SH 1 1790308 NP_866475.1 CDS RB5052 NC_005027.1 2598590 2598760 D hypothetical protein 2598590..2598760 Rhodopirellula baltica SH 1 1790572 NP_866476.1 CDS RB5053 NC_005027.1 2598772 2599761 D PMID: 8973323 best DB hits: BLAST: swissprot:P54724; YFIH_BACSU HYPOTHETICAL 34.8 KD PROTEIN IN GLVBC; E=2e-09 pir:T34928; hypothetical protein SC3F9.06 SC3F9.06 - Streptomyces; E=2e-09 ddbj:BAB04968.1; (AP001511) BH1249~unknown conserved protein; E=0.001 COG: BH2317; COG1082 Predicted endonucleases; E=0.006; hypothetical protein 2598772..2599761 Rhodopirellula baltica SH 1 1793047 NP_866477.1 CDS RB5054 NC_005027.1 2599786 2600100 D hypothetical protein 2599786..2600100 Rhodopirellula baltica SH 1 1792372 NP_866478.1 CDS uup NC_005027.1 2600094 2601971 R PMID: 91035372 PMID: 88240299 best DB hits: BLAST: pir:B82536; ABC transporter ATP-binding protein XF2617 [imported] -; E=1e-130 swissprot:Q57242; UUP1_HAEIN ABC TRANSPORTER ATP-BINDING PROTEIN; E=1e-130 gb:AAK02961.1; (AE006126) Uup1 [Pasteurella multocida]; E=1e-129 COG: XF2617; COG0488 ATPase components of ABC transporters with; E=1e-131 uup; COG0488 ATPase components of ABC transporters with duplicated; E=1e-127 VC1486; COG0488 ATPase components of ABC transporters with; E=1e-126 PFAM: PF00006; ATP synthase alpha/beta famil; E=0.076 PF00005; ABC transporter; E=1.9e-51 PF01202; Shikimate kinase; E=0.76; ABC transporter ATP-binding protein complement(2600094..2601971) Rhodopirellula baltica SH 1 1791484 NP_866479.1 CDS RB5056 NC_005027.1 2601968 2603071 R PMID: 10567266 best DB hits: BLAST: pir:S77512; ABC-type transport protein slr1901 - Synechocystis sp.; E=3e-67 pir:F75377; ABC transporter ATP-binding protein - Deinococcus; E=6e-67 pir:G75548; ABC transporter ATP-binding protein - Deinococcus; E=1e-50 COG: slr1901; COG1131 ABC-type multidrug transport system, ATPase; E=3e-68 BH1054_2; COG0842 Permease component of an ABC-transporter; E=8e-31 PH0820; COG1131 ABC-type multidrug transport system, ATPase; E=1e-30 PFAM: PF00448; SRP54-type protein, GTPase do; E=0.012 PF02223; Thymidylate kinase; E=0.13 PF00005; ABC transporter; E=1.3e-44; ABC transporter ATP-binding protein complement(2601968..2603071) Rhodopirellula baltica SH 1 1791376 NP_866480.1 CDS RB5057 NC_005027.1 2603120 2604748 R PMID: 9384377 best DB hits: BLAST: pir:F69772; hypothetical protein ydbT - Bacillus subtilis -----; E=6e-14 ddbj:BAB05440.1; (AP001512) BH1721~unknown conserved protein; E=7e-13 embl:CAA76218.1; (Y16431) hypothetical protein [Staphylococcus; E=9e-09 COG: BS_ydbS; COG3402 Uncharacterized protein; E=4e-07; hypothetical protein complement(2603120..2604748) Rhodopirellula baltica SH 1 1796025 NP_866481.1 CDS RB5060 NC_005027.1 2604745 2605338 R PMID: 9384377 best DB hits: BLAST: pir:E69772; hypothetical protein ydbS - Bacillus subtilis -----; E=7e-11 ddbj:BAB05439.1; (AP001512) BH1720~unknown conserved protein; E=6e-07 pir:T36081; probable integral membrane protein - Streptomyces; E=6e-06 COG: BS_ydbS; COG3402 Uncharacterized protein; E=7e-12; hypothetical protein complement(2604745..2605338) Rhodopirellula baltica SH 1 1790611 NP_866482.1 CDS RB5061 NC_005027.1 2605376 2605561 R hypothetical protein complement(2605376..2605561) Rhodopirellula baltica SH 1 1791711 NP_866483.1 CDS RB5062 NC_005027.1 2605551 2605784 R hypothetical protein complement(2605551..2605784) Rhodopirellula baltica SH 1 1793226 NP_866484.1 CDS RB5064 NC_005027.1 2605707 2607653 D signal peptide 2605707..2607653 Rhodopirellula baltica SH 1 1790569 NP_866485.1 CDS RB5066 NC_005027.1 2607663 2609054 D best DB hits: BLAST: gb:AAF53435.1; (AE003646) ck gene product [Drosophila melanogaster]; E=0.86; hypothetical protein 2607663..2609054 Rhodopirellula baltica SH 1 1792383 NP_866486.1 CDS RB5067 NC_005027.1 2609147 2609287 R hypothetical protein complement(2609147..2609287) Rhodopirellula baltica SH 1 1791415 NP_866487.1 CDS RB5068 NC_005027.1 2609272 2609433 R hypothetical protein complement(2609272..2609433) Rhodopirellula baltica SH 1 1791344 NP_866488.1 CDS RB5069 NC_005027.1 2609378 2609575 R hypothetical protein complement(2609378..2609575) Rhodopirellula baltica SH 1 1794915 NP_866489.1 CDS RB5071 NC_005027.1 2609627 2610535 R best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.0048; hypothetical protein complement(2609627..2610535) Rhodopirellula baltica SH 1 1793061 NP_866490.1 CDS RB5073 NC_005027.1 2610521 2610739 D hypothetical protein 2610521..2610739 Rhodopirellula baltica SH 1 1792197 NP_866491.1 CDS RB5074 NC_005027.1 2610788 2612038 R signal peptide complement(2610788..2612038) Rhodopirellula baltica SH 1 1791227 NP_866492.1 CDS RB5076 NC_005027.1 2612164 2612505 R hypothetical protein complement(2612164..2612505) Rhodopirellula baltica SH 1 1794874 NP_866493.1 CDS RB5078 NC_005027.1 2612512 2613972 R hypothetical protein complement(2612512..2613972) Rhodopirellula baltica SH 1 1791343 NP_866494.1 CDS RB5081 NC_005027.1 2613920 2614513 R PMID: 89024591 PMID: 94329558 best DB hits: BLAST: gb:AAD31513.1; AF143504_1 (AF143504) ECF-like sigma factor SigE; E=5e-07 gb:AAG01453.1; AF282857_1 (AF282857) HrpL [Pantoea stewartii; E=3e-06 gb:AAF76211.1; AF272053_1 (AF272053) HrpL [Erwinia herbicola pv.; E=5e-06 COG: Rv3223c; COG1595 DNA-directed RNA polymerase specialized sigma; E=6e-06 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=3.5e-05; ECF-like sigma factor SigE complement(2613920..2614513) Rhodopirellula baltica SH 1 1795965 NP_866495.1 CDS RB5083 NC_005027.1 2614510 2615529 R signal peptide complement(2614510..2615529) Rhodopirellula baltica SH 1 1794896 NP_866496.1 CDS RB5084 NC_005027.1 2615529 2617379 R PMID: 11997336 best DB hits: BLAST: gb:AAA65701.1; (U12424) mitochondrial glycerol-3-phosphate; E=0.004 pir:G02093; glycerol-3-phosphate dehydrogenase - human ----- gb:; E=0.004 gb:AAB50200.1; (U79250) glycerol-3-phosphate dehydrogenase [Homo; E=0.004 COG: AF0273; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; E=0.001 PFAM: PF01224; FAD-dependent glycerol-3-phospha; E=3e-05 PF01134; Glucose inhibited division prote; E=0.029 PF00070; Pyridine nucleotide-disulphide o; E=0.00038; hypothetical protein complement(2615529..2617379) Rhodopirellula baltica SH 1 1792634 NP_866497.1 CDS RB5086 NC_005027.1 2616273 2616728 D signal peptide 2616273..2616728 Rhodopirellula baltica SH 1 1790565 NP_866498.1 CDS RB5088 NC_005027.1 2617442 2617615 R hypothetical protein complement(2617442..2617615) Rhodopirellula baltica SH 1 1796258 NP_866499.1 CDS RB5089 NC_005027.1 2617584 2618774 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 2617584..2618774 Rhodopirellula baltica SH 1 1794487 NP_866500.1 CDS RB5092 NC_005027.1 2618771 2618950 D signal peptide 2618771..2618950 Rhodopirellula baltica SH 1 1795805 NP_866501.1 CDS RB5093 NC_005027.1 2619010 2619213 D hypothetical protein 2619010..2619213 Rhodopirellula baltica SH 1 1791949 NP_866502.1 CDS RB5095 NC_005027.1 2619271 2619450 R hypothetical protein complement(2619271..2619450) Rhodopirellula baltica SH 1 1793319 NP_866503.1 CDS RB5096 NC_005027.1 2619419 2619643 D hypothetical protein 2619419..2619643 Rhodopirellula baltica SH 1 1795648 NP_866504.1 CDS RB5097 NC_005027.1 2619601 2620260 R PMID: 7559510 best DB hits: BLAST: ddbj:BAA90651.1; (AB003153) End3 [Paenibacillus polymyxa]; E=3e-28 pir:C71482; probable endonuclease III - Chlamydia trachomatis; E=3e-28 pir:B75537; endonuclease III - Deinococcus radiodurans (strain R1); E=7e-28 COG: CT697; COG0177 Predicted EndoIII-related endonuclease; E=3e-29 PFAM: PF00730; HhH-GPD superfamily base excision DN; E=1.6e-61; endonuclease III complement(2619601..2620260) Rhodopirellula baltica SH 1 1791506 NP_866505.1 CDS RB5098 NC_005027.1 2620293 2621267 R PMID: 7603442 best DB hits: BLAST: swissprot:Q59967; SRPH_SYNP7 SERINE ACETYLTRANSFERASE, PLASMID; E=7e-55 ddbj:BAA82868.1; (AB023954) serine acetyltransferase [Entamoeba; E=3e-35 ddbj:BAA82870.1; (AB023956) serine acetyltransferase 2 [Entamoeba; E=8e-34 COG: BH0110; COG1045 Serine acetyltransferase; E=3e-30 BS_ykuQ; COG2171 Tetrahydrodipicolinate N-succinyltransferase; E=2e-04 wcaB; COG1045 Serine acetyltransferase; E=0.002 PFAM: PF00132; Bacterial transferase hexapeptide (f; E=0.078; serine acetyltransferase, plasmid complement(2620293..2621267) Rhodopirellula baltica SH 1 1794147 NP_866506.1 CDS RB5100 NC_005027.1 2621375 2621890 R hypothetical protein complement(2621375..2621890) Rhodopirellula baltica SH 1 1794291 NP_866507.1 CDS RB5101 NC_005027.1 2621891 2622034 D hypothetical protein 2621891..2622034 Rhodopirellula baltica SH 1 1791264 NP_866508.1 CDS RB5102 NC_005027.1 2622000 2622248 R hypothetical protein complement(2622000..2622248) Rhodopirellula baltica SH 1 1791828 NP_866509.1 CDS RB5103 NC_005027.1 2622260 2623318 D hypothetical protein 2622260..2623318 Rhodopirellula baltica SH 1 1794517 NP_866510.1 CDS RB5107 NC_005027.1 2623431 2623676 D hypothetical protein 2623431..2623676 Rhodopirellula baltica SH 1 1791946 NP_866511.1 CDS RB5108 NC_005027.1 2623643 2623804 D hypothetical protein 2623643..2623804 Rhodopirellula baltica SH 1 1793945 NP_866512.1 CDS RB5109 NC_005027.1 2623683 2623973 D hypothetical protein 2623683..2623973 Rhodopirellula baltica SH 1 1792997 NP_866513.1 CDS RB5110 NC_005027.1 2623792 2623992 D hypothetical protein 2623792..2623992 Rhodopirellula baltica SH 1 1792071 NP_866514.1 CDS RB5111 NC_005027.1 2624056 2624691 R best DB hits: BLAST: pir:E82203; transcriptional regulator TetR family VC1408 [imported] -; E=1e-10 pir:F82161; transcriptional regulator TetR family VC1746 [imported] -; E=4e-10 pir:C83186; probable transcriptional regulator PA3678 [imported] -; E=9e-08 COG: VC1408; COG1309 Transcriptional regulator; E=1e-11 PFAM: PF00440; Bacterial regulatory proteins, tetR; E=2.4e-17; TetR family transcriptional regulator complement(2624056..2624691) Rhodopirellula baltica SH 1 1792967 NP_866515.1 CDS RB5114 NC_005027.1 2624936 2625052 R hypothetical protein complement(2624936..2625052) Rhodopirellula baltica SH 1 1792081 NP_866516.1 CDS RB5116 NC_005027.1 2625071 2626804 D PMID: 8407802 best DB hits: BLAST: pir:F64826; probable membrane protein b0878 - Escherichia coli; E=4e-05 swissprot:P75830; YBJY_ECOLI HYPOTHETICAL 41.7 KDA PROTEIN IN; E=4e-05 gb:AAG55260.1; AE005269_4 (AE005269) membrane protein; E=7e-05 COG: ybjY; COG0845 Membrane-fusion protein; E=4e-06 VC1410; COG1566 Multidrug resistance efflux pump; E=0.008 PFAM: PF00364; Biotin-requiring enzyme; E=0.39; membrane-fusion protein 2625071..2626804 Rhodopirellula baltica SH 1 1790964 NP_866517.1 CDS RB5117 NC_005027.1 2626801 2630130 D PMID: 8407802 best DB hits: BLAST: pir:F82829; acriflavin resistance protein XF0243 [imported] - Xylella; E=2e-88 pir:F82159; transporter, AcrBD/F family VC1757 [imported] - Vibrio; E=3e-86 pir:B83627; probable RND efflux transporter PA0158 [imported] -; E=6e-79 COG: XF0243; COG0841 Cation/multidrug efflux pump; E=2e-89 PFAM: PF00873; AcrB/AcrD/AcrF family; E=3e-15; cation/multidrug efflux pump 2626801..2630130 Rhodopirellula baltica SH 1 1792080 NP_866518.1 CDS RB5118 NC_005027.1 2630150 2630572 R hypothetical protein complement(2630150..2630572) Rhodopirellula baltica SH 1 1792370 NP_866519.1 CDS RB5119 NC_005027.1 2630613 2633738 R signal peptide complement(2630613..2633738) Rhodopirellula baltica SH 1 1790946 NP_866520.1 CDS RB5123 NC_005027.1 2633691 2633858 D hypothetical protein 2633691..2633858 Rhodopirellula baltica SH 1 1795279 NP_866521.1 CDS RB5124 NC_005027.1 2633842 2634558 D hypothetical protein 2633842..2634558 Rhodopirellula baltica SH 1 1790002 NP_866522.1 CDS flgI NC_005027.1 2634468 2636198 R best DB hits: BLAST: pir:G72242; flagellar P-ring protein - Thermotoga maritima (strain; E=9e-07 gb:AAG09321.1; (AF178757) CpcF [Nostoc sp. PCC 7120]; E=0.10 pir:T44927; hypothetical protein orf398 [imported] - Anabaena sp.; E=0.47 COG: TM1539; COG1706 Flagellar basal-body P-ring protein; E=9e-08; flagellar P-ring protein complement(2634468..2636198) Rhodopirellula baltica SH 1 1795262 NP_866523.1 CDS RB5128 NC_005027.1 2636175 2637989 D PMID: 10984043 best DB hits: BLAST: pir:B83386; hypothetical protein PA2078 [imported] - Pseudomonas; E=7e-14 swissprot:P55493; Y4IJ_RHISN HYPOTHETICAL 65.5 KD PROTEIN Y4IJ; E=2e-13 swissprot:P55496; Y4IM_RHISN HYPOTHETICAL 47.1 KD PROTEIN Y4IM; E=1e-11 PFAM: PF00034; Cytochrome c; E=0.064; hypothetical protein 2636175..2637989 Rhodopirellula baltica SH 1 1795227 NP_866524.1 CDS RB5133 NC_005027.1 2638064 2639254 D signal peptide 2638064..2639254 Rhodopirellula baltica SH 1 1790229 NP_866525.1 CDS RB5134 NC_005027.1 2639251 2639877 D PMID: 8789257 best DB hits: BLAST: ddbj:BAB06786.1; (AP001517) BH3067~unknown conserved protein; E=4e-31 pir:S76403; hypothetical protein - Synechocystis sp. (strain PCC; E=7e-29 pir:C69986; conserved hypothetical protein ysnA - Bacillus subtilis; E=1e-27 COG: BH3067; COG0127 Xanthosine triphosphate pyrophosphatase; E=3e-32 PFAM: PF01725; Ham1 family; E=1.2e-72; xanthosine triphosphate pyrophosphatase 2639251..2639877 Rhodopirellula baltica SH 1 1796580 NP_866526.1 CDS RB5135 NC_005027.1 2639853 2640266 R best DB hits: BLAST: swissprot:Q9ZDY5; Y178_RICPR HYPOTHETICAL PROTEIN RP178 -----; E=2e-23 pir:E81913; hypothetical protein NMA0704 [imported] - Neisseria; E=3e-12 pir:G81189; 6-pyruvoyl tetrahydrobiopterin synthase, probable; E=7e-12 COG: RP178; COG0720 6-pyruvoyl-tetrahydropterin synthase; E=2e-24 PFAM: PF01242; 6-pyruvoyl tetrahydropterin synthase; E=1.2e-09; 6-pyruvoyl tetrahydrobiopterin synthase complement(2639853..2640266) Rhodopirellula baltica SH 1 1790040 NP_866527.1 CDS RB5137 NC_005027.1 2640539 2640820 R hypothetical protein complement(2640539..2640820) Rhodopirellula baltica SH 1 1791916 NP_866528.1 CDS RB5138 NC_005027.1 2640848 2641024 R hypothetical protein complement(2640848..2641024) Rhodopirellula baltica SH 1 1794505 NP_866529.1 CDS RB5139 NC_005027.1 2640970 2641920 D hypothetical protein 2640970..2641920 Rhodopirellula baltica SH 1 1790088 NP_866530.1 CDS RB5140 NC_005027.1 2641937 2643778 D PMID: 8472911 best DB hits: BLAST: embl:CAB02496.1; (Z80356) glucose-fructose oxidoreductase; E=2e-07 pdb:1OFG; A Chain A, Glucose-Fructose Oxidoreductase -----; E=2e-07 pdb:1EVJ; A Chain A, Crystal Structure Of Glucose-Fructose; E=2e-07 COG: BH1248; COG0673 Predicted dehydrogenases and related proteins; E=1e-05 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=3.2e-09; NADH-dependent dehydrogenase 2641937..2643778 Rhodopirellula baltica SH 1 1792992 NP_866531.1 CDS RB5143 NC_005027.1 2643848 2645287 D PMID: 10470850 best DB hits: BLAST: ddbj:BAB09588.1; (AB018118) gene_id:MRI1.6~pir D64592~similar to; E=8e-10 pir:S77300; hypothetical protein slr1403 - Synechocystis sp. (strain; E=0.018 PFAM: PF02012; BNR repeat; E=0.076; hypothetical protein 2643848..2645287 Rhodopirellula baltica SH 1 1790147 NP_866532.1 CDS RB5145 NC_005027.1 2645280 2645519 D hypothetical protein 2645280..2645519 Rhodopirellula baltica SH 1 1794538 NP_866533.1 CDS RB5146 NC_005027.1 2645523 2647091 D PMID: 7910580 best DB hits: BLAST: embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=6e-46 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=6e-46 swissprot:P50428; ARSA_MOUSE ARYLSULFATASE A PRECURSOR (ASA); E=2e-45 COG: aslA; COG3119 Arylsulfatase A and related enzymes; E=4e-22 PFAM: PF01069; Fatty acid desaturase; E=0.82 PF00884; Sulfatase; E=1.4e-38; arylsulphatase A 2645523..2647091 Rhodopirellula baltica SH 1 1793387 NP_866534.1 CDS RB5147 NC_005027.1 2647120 2649273 R hypothetical protein complement(2647120..2649273) Rhodopirellula baltica SH 1 1793347 NP_866535.1 CDS RB5149 NC_005027.1 2649249 2650421 R hypothetical protein complement(2649249..2650421) Rhodopirellula baltica SH 1 1792474 NP_866536.1 CDS RB5150 NC_005027.1 2650462 2650605 D hypothetical protein 2650462..2650605 Rhodopirellula baltica SH 1 1795091 NP_866537.1 CDS ilvA NC_005027.1 2650568 2651815 R catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic; threonine dehydratase complement(2650568..2651815) Rhodopirellula baltica SH 1 1791707 NP_866538.1 CDS RB5152 NC_005027.1 2651835 2652788 R PMID: 2229036 best DB hits: BLAST: swissprot:P33982; YHBG_AZOCA PROBABLE ABC TRANSPORTER ATP-BINDING; E=2e-66 gb:AAA80299.1; (U23471) ABC-type permease homolog [Rhizobium; E=1e-64 swissprot:P25885; YHBG_RHIME PROBABLE ABC TRANSPORTER ATP-BINDING; E=7e-63 COG: DR2134; COG1137 ABC-type (unclassified) transport system, ATPase; E=2e-61 PA1071; COG0411 High-affinity branched-chain amino acid transport; E=1e-37 MTH1370; COG1131 ABC-type multidrug transport system, ATPase; E=3e-35 PFAM: PF00005; ABC transporter; E=3.8e-59; ABC transporter ATP-binding protein complement(2651835..2652788) Rhodopirellula baltica SH 1 1792596 NP_866539.1 CDS lepB NC_005027.1 2652810 2654993 R PMID: 2202591 best DB hits: BLAST: pir:C82073; signal peptidase I VC2462 [imported] - Vibrio cholerae; E=3e-07 pir:H83550; signal peptidase I PA0768 [imported] - Pseudomonas; E=3e-06 swissprot:P23697; LEP_SALTY SIGNAL PEPTIDASE I (SPASE I) (LEADER; E=3e-06 COG: VC2462; COG0681 Signal peptidase I; E=3e-08 PFAM: PF00461; Signal peptidase I; E=0.00013; signal peptidase I complement(2652810..2654993) Rhodopirellula baltica SH 1 1796980 NP_866540.1 CDS RB5161 NC_005027.1 2655056 2656354 D hypothetical protein 2655056..2656354 Rhodopirellula baltica SH 1 1794360 NP_866541.1 CDS RB5162 NC_005027.1 2656424 2657602 D hypothetical protein 2656424..2657602 Rhodopirellula baltica SH 1 1792102 NP_866542.1 CDS RB5164 NC_005027.1 2657709 2658365 R signal peptide complement(2657709..2658365) Rhodopirellula baltica SH 1 1793521 NP_866543.1 CDS RB5167 NC_005027.1 2658366 2658500 R hypothetical protein complement(2658366..2658500) Rhodopirellula baltica SH 1 1791682 NP_866544.1 CDS RB5168 NC_005027.1 2658508 2658690 D PMID: 10880436; hypothetical protein 2658508..2658690 Rhodopirellula baltica SH 1 1797035 NP_866545.1 CDS cpaA NC_005027.1 2658816 2659373 D PMID: 11823852 best DB hits: BLAST: swissprot:Q56740; LEP4_VIBVU TYPE 4 PREPILIN-LIKE PROTEINS LEADER; E=0.020 pir:S32915; type IV prepilin peptidase (EC 3.4.99.-) pilD -; E=0.059 pir:B82078; leader peptidase PilD VC2426 [imported] - Vibrio; E=0.065 COG: VC2426; COG1989 Signal peptidase, cleaves prepilin-like proteins; E=0.006 PFAM: PF01478; Type III leader peptidase famil; E=0.028; type IV prepilin peptidase CpaA 2658816..2659373 Rhodopirellula baltica SH 1 1792048 NP_866546.1 CDS cpaB NC_005027.1 2659566 2660777 D PMID: 10880436 best DB hits: BLAST: gb:AAF40191.1; AF229646_3 (AF229646) CpaB [Caulobacter crescentus]; E=0.003 pir:A70601; hypothetical protein Rv0990c - Mycobacterium; E=0.18; pilus assembly protein CpaB 2659566..2660777 Rhodopirellula baltica SH 1 1790173 NP_866547.1 CDS RB5173 NC_005027.1 2660799 2660933 R hypothetical protein complement(2660799..2660933) Rhodopirellula baltica SH 1 1796592 NP_866548.1 CDS cpaC NC_005027.1 2660936 2662705 D PMID: 10880436 best DB hits: BLAST: swissprot:P55702; Y4XJ_RHISN HYPOTHETICAL 44.3 KD PROTEIN Y4XJ; E=1e-40 gb:AAG60826.1; AF322012_131 (AF322013) RhcC2 [Bradyrhizobium; E=4e-36 gb:AAF40192.1; AF229646_4 (AF229646) CpaC [Caulobacter crescentus]; E=5e-32 COG: PA4304; COG1450 General secretory pathway protein D; E=1e-24 PFAM: PF00263; Bacterial type II and III secreti; E=3e-26; outer membrane channel for pilus assembly CpaC 2660936..2662705 Rhodopirellula baltica SH 1 1793166 NP_866549.1 CDS cpaE NC_005027.1 2662802 2664031 D PMID: 10880436 best DB hits: BLAST: pir:F83108; hypothetical protein PA4303 [imported] - Pseudomonas; E=3e-11 gb:AAF40194.1; AF229646_6 (AF229646) CpaE [Caulobacter crescentus]; E=3e-06 swissprot:Q55900; MIND_SYNY3 SEPTUM SITE-DETERMINING PROTEIN MIND; E=3e-05 COG: sll0289; COG2894 Septum formation inhibitor-activating ATPase; E=2e-06 PH0612; COG0455 ATPases involved in chromosome partitioning; E=4e-05 BH3842_1; COG0784 CheY-like receiver domains; E=0.001 PFAM: PF00072; Response regulator receiver doma; E=0.0058; pilus assembly protein CpaE 2662802..2664031 Rhodopirellula baltica SH 1 1793726 NP_866550.1 CDS lnt NC_005027.1 2664203 2665918 D PMID: 8344936 best DB hits: BLAST: swissprot:Q9ZDG3; LNT_RICPR APOLIPOPROTEIN N-ACYLTRANSFERASE (ALP; E=7e-14 pir:A82261; apolipoprotein N-acyltransferase VC0958 [imported] -; E=2e-12 swissprot:P44626; LNT_HAEIN APOLIPOPROTEIN N-ACYLTRANSFERASE (ALP; E=1e-10 COG: RP366; COG0815 Apolipoprotein N-acyltransferase; E=6e-15; apolipoprotein N-acyltransferase 2664203..2665918 Rhodopirellula baltica SH 1 1795530 NP_866551.1 CDS proS NC_005027.1 2665962 2667482 R catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase complement(2665962..2667482) Rhodopirellula baltica SH 1 1793601 NP_866552.1 CDS carA NC_005027.1 2667464 2668633 R catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit complement(2667464..2668633) Rhodopirellula baltica SH 1 1793662 NP_866553.1 CDS RB5180 NC_005027.1 2668584 2668793 D signal peptide 2668584..2668793 Rhodopirellula baltica SH 1 1789955 NP_866554.1 CDS RB5181 NC_005027.1 2668763 2668873 D hypothetical protein 2668763..2668873 Rhodopirellula baltica SH 1 1793232 NP_866555.1 CDS RB5182 NC_005027.1 2668888 2669247 R hypothetical protein complement(2668888..2669247) Rhodopirellula baltica SH 1 1790047 NP_866556.1 CDS RB5184 NC_005027.1 2669274 2669903 R signal peptide complement(2669274..2669903) Rhodopirellula baltica SH 1 1790143 NP_866557.1 CDS RB5186 NC_005027.1 2669970 2671136 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(2669970..2671136) Rhodopirellula baltica SH 1 1794883 NP_866558.1 CDS RB5189 NC_005027.1 2671205 2672944 R hypothetical protein complement(2671205..2672944) Rhodopirellula baltica SH 1 1789932 NP_866559.1 CDS queA NC_005027.1 2672933 2674141 D PMID: 8347586 best DB hits: BLAST: swissprot:Q9WZ44; QUEA_THEMA S-ADENOSYLMETHIONINE:TRNA; E=2e-68 gb:AAK05673.1; AE006388_4 (AE006388) S-adenosylmethionine tRNA; E=3e-68 swissprot:O32054; QUEA_BACSU S-ADENOSYLMETHIONINE:TRNA; E=2e-64 COG: TM0574; COG0809; E=2e-69 queA; COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase; E=7e-57 HI0245; COG0809; E=1e-54 PFAM: PF02547; Queuosine biosynthesis protei; E=5.5e-57; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 2672933..2674141 Rhodopirellula baltica SH 1 1795732 NP_866560.1 CDS RB5195 NC_005027.1 2674328 2675845 D PMID: 8020961 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=5e-32 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=2e-29 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=1e-28 COG: yidJ; COG3119 Arylsulfatase A and related enzymes; E=2e-24 PFAM: PF00884; Sulfatase; E=7.6e-66; N-acetylgalactosamine 6-sulfatase (GALNS) 2674328..2675845 Rhodopirellula baltica SH 1 1793092 NP_866561.1 CDS RB5196 NC_005027.1 2675953 2678058 R PMID: 9882648 PMID: 10411273 best DB hits: BLAST: embl:CAA09772.1; (AJ011781) amylosucrase [Neisseria; E=1e-165 pir:C75457; alpha-amlyase - Deinococcus radiodurans (strain R1); E=1e-123 pir:E75322; probable trehalose synthase - Deinococcus radiodurans; E=4e-41 COG: DR0933; COG0366 Glycosidases; E=1e-124 PFAM: PF00128; Alpha amylase, catalytic domain; E=1.5e-26; alpha-amylase complement(2675953..2678058) Rhodopirellula baltica SH 1 1792515 NP_866562.1 CDS sps NC_005027.1 2677961 2680276 R PMID: 1840396 PMID: 10411273 best DB hits: BLAST: pir:S75935; hypothetical protein - Synechocystis sp. (strain PCC; E=1e-155 pir:T04062; sucrose-phosphate synthase homolog F28M11.40 - Arabidopsis; E=6e-91 pir:T04103; sucrose-phosphate synthase (EC 2.4.1.14) 1 - rice; E=1e-87 COG: sll0045_1; COG0438 Predicted glycosyltransferases; E=1e-111 sll0045_2; COG0561 Predicted hydrolases of the HAD superfamily; E=8e-40 PH1844; COG0438 Predicted glycosyltransferases; E=2e-11 PFAM: PF00534; Glycosyl transferases group 1; E=2.6e-18 PF00702; haloacid dehalogenase-like hy; E=0.67; sucrose-phosphate synthase complement(2677961..2680276) Rhodopirellula baltica SH 1 1793982 NP_866563.1 CDS scrK NC_005027.1 2680318 2681346 R PMID: 1809835 PMID: 10411273 best DB hits: BLAST: gb:AAG60871.1; AF322012_176 (AF322013) ID402 [Bradyrhizobium; E=5e-08 gb:AAK03933.1; (AE006222) unknown [Pasteurella multocida]; E=2e-06 pir:G75112; fructokinase (EC 2.7.1.4) PAB0482 - Pyrococcus abyssi; E=2e-05 COG: PAB0482; COG0524 Sugar kinases, ribokinase; E=2e-06 PFAM: PF00294; pfkB family carbohydrate kinase; E=2.5e-12; fructokinase complement(2680318..2681346) Rhodopirellula baltica SH 1 1790750 NP_866564.1 CDS RB5200 NC_005027.1 2681425 2684253 D PMID: 1747104 best DB hits: BLAST: ddbj:BAA11010.1; (D64130) alpha-amylase [Sulfolobus solfataricus]; E=4e-93 pir:JC5135; alpha-amylase (EC 3.2.1.1) - Sulfolobus solfataricus; E=4e-93 pir:S73087; alpha-amylase (EC 3.2.1.1) precursor - Sulfolobus; E=1e-89 COG: Rv1562c; COG0296 1,4-alpha-glucan branching enzyme; E=6e-72 BS_amyX; COG1523 Pullulanase and related glycosidases; E=1e-14 YEL011w; COG0296 1,4-alpha-glucan branching enzyme; E=1e-12 PFAM: PF00128; Alpha amylase, catalytic domain; E=2.4e-17; alpha-amylase 2681425..2684253 Rhodopirellula baltica SH 1 1792821 NP_866565.1 CDS RB5205 NC_005027.1 2684362 2686242 D PMID: 2186809 best DB hits: BLAST: ddbj:BAB04896.1; (AP001511) protein secretion (post-translocation; E=2e-08 pir:E71662; protein export protein prsa precursor (prsA) RP576 -; E=3e-05 pir:A83421; peptidyl-prolyl cis-trans isomerase D PA1805 [imported]; E=4e-05 COG: BH1177; COG0760 Parvulin-like peptidyl-prolyl isomerase; E=2e-09 PFAM: PF00639; PPIC-type PPIASE domain.; E=2.4e-08; peptidyl-prolyl cis-trans isomerase 2684362..2686242 Rhodopirellula baltica SH 1 1793267 NP_866566.1 CDS RB5207 NC_005027.1 2686274 2686471 R hypothetical protein complement(2686274..2686471) Rhodopirellula baltica SH 1 1795906 NP_866567.1 CDS RB5208 NC_005027.1 2686533 2687357 R PMID: 11030655 best DB hits: BLAST: embl:CAA98714.1; (Z74189) ORF YDL141w [Saccharomyces cerevisiae]; E=0.018 pir:H81716; biotin apo-protein ligase-related protein TC0305; E=0.020 pir:A72116; biotin apo-protein ligase-related protein CP0643; E=0.089; biotin apo-protein ligase-related protein complement(2686533..2687357) Rhodopirellula baltica SH 1 1791745 NP_866568.1 CDS RB5209 NC_005027.1 2687356 2687661 D hypothetical protein 2687356..2687661 Rhodopirellula baltica SH 1 1792376 NP_866569.1 CDS RB5210 NC_005027.1 2687633 2688904 D signal peptide 2687633..2688904 Rhodopirellula baltica SH 1 1796150 NP_866570.1 CDS RB5211 NC_005027.1 2688867 2689346 D hypothetical protein 2688867..2689346 Rhodopirellula baltica SH 1 1790015 NP_866571.1 CDS RB5212 NC_005027.1 2689312 2689485 D hypothetical protein 2689312..2689485 Rhodopirellula baltica SH 1 1791502 NP_866572.1 CDS RB5213 NC_005027.1 2689508 2690194 R PMID: 11016950 best DB hits: BLAST: gb:AAG19976.1; (AE005079) Vng1746c [Halobacterium sp. NRC-1]; E=7e-08 embl:CAB61591.1; (AL133210) hypothetical protein SCG11A.10c; E=1e-04 swissprot:P54543; YQJF_BACSU HYPOTHETICAL 23.9 KD PROTEIN IN; E=0.002 COG: VNG1746C; COG3361 Uncharacterized ACR; E=7e-09; hypothetical protein complement(2689508..2690194) Rhodopirellula baltica SH 1 1791653 NP_866573.1 CDS RB5214 NC_005027.1 2690277 2691764 R hypothetical protein complement(2690277..2691764) Rhodopirellula baltica SH 1 1794672 NP_866574.1 CDS RB5217 NC_005027.1 2691666 2692205 D hypothetical protein 2691666..2692205 Rhodopirellula baltica SH 1 1794778 NP_866575.1 CDS RB5220 NC_005027.1 2691774 2692151 R hypothetical protein complement(2691774..2692151) Rhodopirellula baltica SH 1 1792057 NP_866576.1 CDS RB5221 NC_005027.1 2692135 2692467 R hypothetical protein complement(2692135..2692467) Rhodopirellula baltica SH 1 1795323 NP_866577.1 CDS RB5223 NC_005027.1 2692568 2693866 D best DB hits: BLAST: pir:MMFFB2; laminin gamma-1 chain precursor - fruit fly (Drosophila; E=0.34 swissprot:P15215; LMG1_DROME LAMININ GAMMA-1 CHAIN PRECURSOR; E=0.34 prf:1410326A; laminin B2 [Drosophila sp.]; E=0.34; merozoite surface protein 3b 2692568..2693866 Rhodopirellula baltica SH 1 1790372 NP_866578.1 CDS RB5225 NC_005027.1 2693979 2694245 R hypothetical protein complement(2693979..2694245) Rhodopirellula baltica SH 1 1794130 NP_866579.1 CDS tag NC_005027.1 2694230 2694835 D PMID: 3536912 best DB hits: BLAST: embl:CAC01344.1; (AL390975) DNA-3-methyladenine glycosylase I; E=1e-44 gb:AAG58698.1; AE005582_1 (AE005582) 3-methyladenine DNA; E=1e-42 swissprot:P05100; 3MG1_ECOLI DNA-3-METHYLADENINE GLYCOSYLASE I; E=2e-42 COG: tag; COG2818 3-Methyladenine DNA glycosylase; E=2e-43; DNA-3-methyladenine glycosylase I 2694230..2694835 Rhodopirellula baltica SH 1 1791126 NP_866580.1 CDS RB5228 NC_005027.1 2694819 2695079 R hypothetical protein complement(2694819..2695079) Rhodopirellula baltica SH 1 1793274 NP_866581.1 CDS RB5229 NC_005027.1 2695138 2695872 D signal peptide 2695138..2695872 Rhodopirellula baltica SH 1 1793444 NP_866582.1 CDS RB5230 NC_005027.1 2695884 2696963 D signal peptide 2695884..2696963 Rhodopirellula baltica SH 1 1792053 NP_866583.1 CDS RB5231 NC_005027.1 2696909 2697256 R best DB hits: BLAST: pir:JN0454; hypothetical 10.5K protein (URA1 5' region) - gill; E=2e-14 pir:D70531; hypothetical protein Rv2705c - Mycobacterium; E=2e-05 pir:A75544; conserved hypothetical protein - Deinococcus radiodurans; E=4e-05; hypothetical protein complement(2696909..2697256) Rhodopirellula baltica SH 1 1791681 NP_866584.1 CDS RB5235 NC_005027.1 2697353 2697820 R signal peptide complement(2697353..2697820) Rhodopirellula baltica SH 1 1790991 NP_866585.1 CDS RB5238 NC_005027.1 2697775 2697996 D hypothetical protein 2697775..2697996 Rhodopirellula baltica SH 1 1793656 NP_866586.1 CDS RB5240 NC_005027.1 2698074 2698631 D best DB hits: PFAM: PF01617; Surface antigen; E=0.0013; signal peptide 2698074..2698631 Rhodopirellula baltica SH 1 1794545 NP_866587.1 CDS RB5241 NC_005027.1 2698715 2699374 D best DB hits: PFAM: PF01434; Peptidase M41; E=0.034; hypothetical protein 2698715..2699374 Rhodopirellula baltica SH 1 1795350 NP_866588.1 CDS xynB NC_005027.1 2699382 2700380 D PMID: 1909424 best DB hits: BLAST: swissprot:P26223; XYNB_BUTFI ENDO-1,4-BETA-XYLANASE B (XYLANASE B); E=1e-08 prf:1718306A; xylanase [Butyrivibrio fibrisolvens]; E=1e-08 gb:AAK04528.1; AE006280_4 (AE006280) sugar hydrolase [Lactococcus; E=4e-06; endo-1,4-beta-xylanase B 2699382..2700380 Rhodopirellula baltica SH 1 1792334 NP_866589.1 CDS RB5245 NC_005027.1 2700384 2701043 D PMID: 7495855 best DB hits: BLAST: ddbj:BAB06584.1; (AP001516) hemolysin III [Bacillus halodurans]; E=1e-17 swissprot:P54176; HLY3_BACCE HEMOLYSIN III (HLY-III) -----; E=2e-16 swissprot:Q46827; YQFA_ECOLI HYPOTHETICAL 23.8 KD PROTEIN IN; E=2e-16 COG: BH2865; COG1272 Predicted membrane proteins, hemolysin III homologs; E=1e-18; hemolysin III 2700384..2701043 Rhodopirellula baltica SH 1 1793287 NP_866590.1 CDS RB5246 NC_005027.1 2700916 2701917 R signal peptide complement(2700916..2701917) Rhodopirellula baltica SH 1 1795411 NP_866591.1 CDS RB5247 NC_005027.1 2702014 2704806 R best DB hits: BLAST: swissprot:Q00808; HET1_PODAN VEGETATIBLE INCOMPATIBILITY PROTEIN; E=2e-25 swissprot:P49695; PKWA_THECU SERINETHREONINE-PROTEIN; E=1e-21 embl:CAB45034.1; (AL078635) WD-repeat containing protein; E=1e-21 COG: sll0163; COG2319 WD40 repeat protein; E=4e-18 PFAM: PF00400; WD domain, G-beta repeat; E=3e-05; hypothetical protein complement(2702014..2704806) Rhodopirellula baltica SH 1 1792619 NP_866592.1 CDS RB5253 NC_005027.1 2704803 2707307 R PMID: 7522196 best DB hits: BLAST: swissprot:P35824; SLAP_BACCI S-LAYER RELATED PROTEIN PRECURSOR; E=0.18 PFAM: PF02369; Bacterial Ig-like domain (group 1); E=0.1 PF02368; Bacterial Ig-like domain (group 2); E=0.013; S-layer related protein complement(2704803..2707307) Rhodopirellula baltica SH 1 1791413 NP_866593.1 CDS RB5255 NC_005027.1 2707304 2708806 R hypothetical protein complement(2707304..2708806) Rhodopirellula baltica SH 1 1795201 NP_866594.1 CDS RB5256 NC_005027.1 2708872 2710458 D PMID: 1955860 best DB hits: BLAST: pir:B72216; endoglucanase - Thermotoga maritima (strain MSB8); E=7e-85 swissprot:P25472; GUND_CLOCE ENDOGLUCANASE D PRECURSOR; E=3e-52 swissprot:P16218; GUNH_CLOTM ENDOGLUCANASE H PRECURSOR (EGH); E=5e-49 COG: TM1751; COG2730 Endoglucanase; E=6e-86 PFAM: PF00150; Cellulase (glycosyl hydrolase famil; E=5.3e-47; cellulase 2708872..2710458 Rhodopirellula baltica SH 1 1794624 NP_866595.1 CDS RB5258 NC_005027.1 2710474 2710641 R hypothetical protein complement(2710474..2710641) Rhodopirellula baltica SH 1 1793017 NP_866596.1 CDS RB5259 NC_005027.1 2710634 2713378 R best DB hits: BLAST: pir:D83545; probable helicase PA0799 [imported] - Pseudomonas; E=8e-44 pir:C72027; swisnf family helicase_2 - Chlamydophila pneumoniae; E=6e-42 ddbj:BAA99057.1; (AP002548) SWISNF family helicase_2; E=1e-41 COG: PA0799; COG0553 Superfamily II DNA/RNA helicases, SNF2 family; E=7e-45 PFAM: PF00176; SNF2 and others N-terminal domain; E=2.4e-43 PF00271; Helicase conserved C-terminal doma; E=1.4e-23; SNF2 family helicase complement(2710634..2713378) Rhodopirellula baltica SH 1 1791044 NP_866597.1 CDS RB5261 NC_005027.1 2713332 2713712 R hypothetical protein complement(2713332..2713712) Rhodopirellula baltica SH 1 1793299 NP_866598.1 CDS RB5262 NC_005027.1 2713742 2714029 D hypothetical protein 2713742..2714029 Rhodopirellula baltica SH 1 1796225 NP_866599.1 CDS RB5263 NC_005027.1 2714052 2714999 D best DB hits: BLAST: ref:XP_010773.1; hypothetical protein FLJ11151 [Homo sapiens]; E=2e-53 ddbj:BAA92034.1; (AK002013) unnamed protein product [Homo; E=7e-53 ddbj:BAB14194.1; (AK022710) unnamed protein product [Homo; E=2e-52; hypothetical protein 2714052..2714999 Rhodopirellula baltica SH 1 1796730 NP_866600.1 CDS RB5264 NC_005027.1 2715126 2715548 D hypothetical protein 2715126..2715548 Rhodopirellula baltica SH 1 1792281 NP_866601.1 CDS RB5266 NC_005027.1 2715584 2715721 R hypothetical protein complement(2715584..2715721) Rhodopirellula baltica SH 1 1793221 NP_866602.1 CDS RB5267 NC_005027.1 2715679 2715819 R hypothetical protein complement(2715679..2715819) Rhodopirellula baltica SH 1 1792869 NP_866603.1 CDS RB5268 NC_005027.1 2715827 2717386 R hypothetical protein complement(2715827..2717386) Rhodopirellula baltica SH 1 1792310 NP_866604.1 CDS RB5271 NC_005027.1 2717327 2717596 D hypothetical protein 2717327..2717596 Rhodopirellula baltica SH 1 1795614 NP_866605.1 CDS RB5272 NC_005027.1 2717593 2718966 D PMID: 9389475 best DB hits: BLAST: gb:AAB89850.1; (AE001008) conserved hypothetical protein; E=0.006 gb:AAG09249.1; AF176640_2 (AF176640) alcohol dehydrogenase; E=0.20 gb:AAD56237.2; AF184915_1 (AF184915) methanol dehydrogenase large; E=0.22 COG: AF1399; COG1520 Uncharacterized proteins of WD40-like repeat family; E=5e-04 PFAM: PF01011; PQQ enzyme repeat; E=0.022; hypothetical protein 2717593..2718966 Rhodopirellula baltica SH 1 1794837 NP_866606.1 CDS RB5275 NC_005027.1 2719039 2719860 R PMID: 8451183 best DB hits: BLAST: pir:C83489; probable transcriptional regulator PA1261 [imported] -; E=1e-39 gb:AAF43900.1; (U20115) adpA-like protein [Mycobacterium; E=2e-10 pir:T43707; hypothetical protein [imported] - Streptomyces; E=2e-09 COG: PA1261; COG2207 AraC-type DNA-binding domain-containing proteins; E=1e-40 PFAM: PF00165; Bacterial regulatory helix-turn-heli; E=2.7e-22; transcriptional regulator complement(2719039..2719860) Rhodopirellula baltica SH 1 1792550 NP_866607.1 CDS dapA NC_005027.1 2719913 2720884 D PMID: 1463470 best DB hits: BLAST: pir:D81141; dihydrodipicolinate synthase NMB0929 [imported] -; E=3e-09 pir:H81878; probable dihydrodipicolinate synthase (EC 4.2.1.52); E=4e-09 ddbj:BAB05461.1; (AP001513) dihydrodipicolinate synthase; E=1e-07 COG: NMB0929; COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate; E=3e-10 PFAM: PF01137; RNA 3'-terminal phosphate cyclase; E=0.88 PF00701; Dihydrodipicolinate synthetase famil; E=0.00018; dihydrodipicolinate synthase 2719913..2720884 Rhodopirellula baltica SH 1 1795592 NP_866608.1 CDS dadA NC_005027.1 2720784 2722154 D PMID: 7906689 best DB hits: BLAST: pir:F82279; D-amino acid dehydrogenase, small chain VC0786; E=7e-43 pir:A81228; D-amino acid dehydrogenase, small chain NMB0176; E=1e-42 pir:C82001; D-amino-acid dehydrogenase (EC 1.4.99.1) small subunit; E=3e-40 COG: VC0786; COG0665 Glycine/D-amino acid oxidases (deaminating); E=6e-44 PFAM: PF01494; FAD binding domain; E=0.0014 PF02254; KTN NAD-binding domain; E=0.056 PF02032; Phytoene dehydrogenase related; E=0.013; D-amino acid dehydrogenase, small chain 2720784..2722154 Rhodopirellula baltica SH 1 1795503 NP_866609.1 CDS RB5279 NC_005027.1 2722255 2723181 D signal peptide 2722255..2723181 Rhodopirellula baltica SH 1 1796995 NP_866610.1 CDS RB5280 NC_005027.1 2723227 2724033 R PMID: 7778976 PMID: 8086457 PMID: 11722934 best DB hits: BLAST: pir:S47527; extracellular sucrase - Zymomonas mobilis ----- prf:; E=0.10 swissprot:Q60115; INVB_ZYMMO EXTRACELLULAR SUCRASE; E=0.24 gb:AAC36942.1; (L33403) extracellular sucrase [Zymomonas mobilis]; E=0.24; extracellular sucrase complement(2723227..2724033) Rhodopirellula baltica SH 1 1792637 NP_866611.1 CDS RB5281 NC_005027.1 2724076 2725707 R PMID: 8020961 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=6e-47 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=8e-46 pir:KJHUAB; N-acetylgalactosamine-4-sulfatase (EC 3.1.6.12); E=1e-44 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=1e-41 TM1703; COG1368 Phosphoglycerol transferase and related proteins,; E=7e-04 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=0.003 PFAM: PF00884; Sulfatase; E=2.1e-109; N-acetylgalactosamine 6-sulfatase (GALNS) complement(2724076..2725707) Rhodopirellula baltica SH 1 1790790 NP_866612.1 CDS RB5282 NC_005027.1 2725707 2727443 R PMID: 10809675 best DB hits: BLAST: gb:AAF72520.1; AF248951_1 (AF248951) mucin-desulfating sulfatase; E=2e-32 swissprot:P31447; YIDJ_ECOLI SULFATASE YIDJ -----; E=4e-27 gb:AAG58881.1; AE005599_13 (AE005599) sulfatase; E=8e-26 COG: yidJ; COG3119 Arylsulfatase A and related enzymes; E=3e-28 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=0.005 PFAM: PF00884; Sulfatase; E=1.1e-26; mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase) complement(2725707..2727443) Rhodopirellula baltica SH 1 1792047 NP_866613.1 CDS RB5284 NC_005027.1 2727377 2727532 R hypothetical protein complement(2727377..2727532) Rhodopirellula baltica SH 1 1795149 NP_866614.1 CDS RB5285 NC_005027.1 2727636 2727872 R PMID: 8981332 best DB hits: BLAST: gb:AAA67751.1; (U16789) collagen alpha-2 (XI) chain [Mus; E=0.024 gb:AAA67752.1; (U16790) collagen alpha-2 (XI) chain [Mus; E=0.024 pir:A55576; collagen alpha 2(XI) chain precursor, long form - mouse; E=0.024; collagen alpha-2 (XI) chain complement(2727636..2727872) Rhodopirellula baltica SH 1 1791160 NP_866615.1 CDS RB5286 NC_005027.1 2727882 2728355 R signal peptide complement(2727882..2728355) Rhodopirellula baltica SH 1 1792177 NP_866616.1 CDS RB5288 NC_005027.1 2728431 2729522 R best DB hits: BLAST: embl:CAB45032.1; (AL078635) large multi-functional; E=3e-22 embl:CAB58265.1; (AL121849) multi-domain protein; E=9e-19 pir:T36423; probable large, multifunctional secreted protein -; E=0.002; large multi-functional protein complement(2728431..2729522) Rhodopirellula baltica SH 1 1791134 NP_866617.1 CDS RB5290 NC_005027.1 2729519 2730955 R best DB hits: BLAST: pir:T34927; probable oxidoreductase - Streptomyces coelicolor; E=2e-07 gb:AAC23913.1; (AF039207) NADH-dependent dehydrogenase homolog; E=6e-07 pir:B72359; lipopolysaccharide biosynthesis protein BplA -; E=3e-05 COG: TM0585; COG0673 Predicted dehydrogenases and related proteins; E=3e-06 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=3.2e-18; NADH-dependent dehydrogenase complement(2729519..2730955) Rhodopirellula baltica SH 1 1790152 NP_866618.1 CDS RB5294 NC_005027.1 2730983 2732584 R PMID: 9634230 best DB hits: BLAST: pir:F70837; probable sulfatase (EC 3.1.6.-) atsG - Mycobacterium; E=1e-37 prf:2204388A; sulphamidase [Homo sapiens]; E=4e-23 gb:AAG41945.1; AF304053_1 (AF304053) heparan N-sulfatase [Mus; E=8e-23 COG: Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=1e-38 PFAM: PF00884; Sulfatase; E=1.5e-28; sulfatase atsG complement(2730983..2732584) Rhodopirellula baltica SH 1 1790203 NP_866619.1 CDS RB5295 NC_005027.1 2732591 2734072 R PMID: 96083602 best DB hits: BLAST: prf:2204388A; sulphamidase [Homo sapiens]; E=6e-47 gb:AAG17207.1; AF217204_1 (AF217204) heparan sulfate sulfamidase; E=6e-45 gb:AAF29467.1; (AF156255) N-sulfoglucosamine sulfohydrolase [Mus; E=4e-44 COG: Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=6e-38 VC2600; COG3083 Predicted hydrolase of alkaline phosphatase; E=9e-05 VNG0061C; COG3119 Arylsulfatase A and related enzymes; E=0.006 PFAM: PF00884; Sulfatase; E=1.4e-43; heparan N-sulfatase complement(2732591..2734072) Rhodopirellula baltica SH 1 1792435 NP_866620.1 CDS RB5298 NC_005027.1 2734032 2734208 D hypothetical protein 2734032..2734208 Rhodopirellula baltica SH 1 1795667 NP_866621.1 CDS RB5300 NC_005027.1 2734433 2735635 R signal peptide complement(2734433..2735635) Rhodopirellula baltica SH 1 1792789 NP_866622.1 CDS RB5302 NC_005027.1 2735773 2736366 R PMID: 11823852; signal peptide complement(2735773..2736366) Rhodopirellula baltica SH 1 1793922 NP_866623.1 CDS RB5303 NC_005027.1 2736514 2736717 R hypothetical protein complement(2736514..2736717) Rhodopirellula baltica SH 1 1792577 NP_866624.1 CDS RB5304 NC_005027.1 2736686 2737825 D PMID: 10910347 best DB hits: BLAST: pir:C82791; conserved hypothetical protein XF0565 [imported] -; E=2e-39 pir:F72345; ray-related protein - Thermotoga maritima (strain MSB8); E=3e-20 ddbj:BAB15493.1; (AK026507) unnamed protein product [Homo; E=6e-19 COG: XF0565; COG2930 Uncharacterized ACR; E=2e-40 PFAM: PF02590; Uncharacterized ACR, COG1576; E=0.0018; hypothetical protein 2736686..2737825 Rhodopirellula baltica SH 1 1791980 NP_866625.1 CDS RB5305 NC_005027.1 2737884 2739260 D PMID: 7910580 best DB hits: BLAST: embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=7e-32 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=7e-32 pdb:1E2S; P Chain P, Crystal Structure Of An Arylsulfatase A; E=1e-31 COG: aslA; COG3119 Arylsulfatase A and related enzymes; E=6e-28 BS_yqgS; COG1368 Phosphoglycerol transferase and related proteins,; E=0.001 VC2600; COG3083 Predicted hydrolase of alkaline phosphatase; E=0.006 PFAM: PF00884; Sulfatase; E=3.5e-33; arylsulphatase A 2737884..2739260 Rhodopirellula baltica SH 1 1790318 NP_866626.1 CDS melR NC_005027.1 2739330 2740187 R PMID: 2830169 PMID: 1445207 best DB hits: BLAST: gb:AAC24510.1; (AF049243) regulatory protein [Mesorhizobium loti]; E=5e-37 swissprot:P10411; MELR_ECOLI MELIBIOSE OPERON REGULATORY PROTEIN; E=6e-28 ddbj:BAB20427.1; (AB053204) melibiose operon regulatory protein; E=9e-28 COG: melR; COG2207 AraC-type DNA-binding domain-containing proteins; E=6e-29 BS_adaA; COG2169 Adenosine deaminase; E=6e-10 VC1825; COG2207 AraC-type DNA-binding domain-containing proteins; E=2e-09 PFAM: PF00165; Bacterial regulatory helix-turn-heli; E=1.8e-24; melibiose operon regulatory protein complement(2739330..2740187) Rhodopirellula baltica SH 1 1796244 NP_866627.1 CDS RB5310 NC_005027.1 2740323 2741906 D PMID: 11259647 best DB hits: BLAST: gb:AAA93130.1; (U09139) chitinase precursor [Aeromonas; E=0.63 gb:AAG09437.1; AF181852_1 (AF181852) chitinase 92 [Aeromonas; E=0.63 PFAM: PF00801; PKD domain; E=0.25 PF00028; Cadherin domain; E=0.047; signal peptide 2740323..2741906 Rhodopirellula baltica SH 1 1792261 NP_866628.1 CDS pel NC_005027.1 2741996 2743363 D PMID: 8955401 PMID: 9427544 best DB hits: BLAST: embl:CAA65785.1; (X97119) pectate lyase [Erwinia chrysanthemi]; E=5e-29 pir:JC6502; pectate lyase (EC 4.2.2.2) - Amycolata sp ----- gb:; E=0.026 gb:AAF23285.1; AC016661_10 (AC016661) pectate lyase; E=0.037; pectate lyase 2741996..2743363 Rhodopirellula baltica SH 1 1791345 NP_866629.1 CDS RB5313 NC_005027.1 2743385 2745451 D PMID: 10360571 best DB hits: BLAST: pir:F72395; hypothetical protein TM0280 - Thermotoga maritima; E=1e-102 gb:AAG58726.1; AE005584_8 (AE005584) orf; hypothetical protein; E=2e-82 ddbj:BAB05596.1; (AP001513) BH1877~unknown conserved protein in; E=6e-15; ATP binding protein 2743385..2745451 Rhodopirellula baltica SH 1 1791734 NP_866630.1 CDS RB5316 NC_005027.1 2745433 2746494 D PMID: 8955401 PMID: 1983191 best DB hits: BLAST: pir:JC6502; pectate lyase (EC 4.2.2.2) - Amycolata sp ----- gb:; E=6e-30 pir:D72376; pectate lyase - Thermotoga maritima (strain MSB8); E=1e-26 ddbj:BAA96477.1; (AB041769) pectate lyase Pel-4A [Bacillus sp.; E=3e-25 PFAM: PF00544; Pectate lyase; E=8.6e-31; pectate lyase 2745433..2746494 Rhodopirellula baltica SH 1 1791111 NP_866631.1 CDS RB5319 NC_005027.1 2746608 2747300 D best DB hits: BLAST: gb:AAB90381.1; (AE001045) D-arabino 3-hexulose 6-phosphate; E=1e-33 pir:B71209; probable D-arabino 3-hexulose 6-phosphate formaldehyde; E=8e-33 pir:C75022; d-arabino 3-hexulose 6-phosphate formaldehyde lyase; E=7e-28 COG: AF0861_1; COG0269 3-hexulose-6-phosphate synthase and related; E=1e-33 sgaH; COG0269 3-hexulose-6-phosphate synthase and related proteins; E=4e-10 VCA0242; COG0269 3-hexulose-6-phosphate synthase and related; E=3e-09 PFAM: PF00834; Ribulose-phosphate 3 epimerase; E=0.56 PF02581; Thiamine monophosphate synthas; E=0.01; D-arabino 3-hexulose 6-phosphate formaldehyde lyase (hps-1) 2746608..2747300 Rhodopirellula baltica SH 1 1791607 NP_866632.1 CDS RB5320 NC_005027.1 2747272 2748462 D PMID: 3622514 best DB hits: BLAST: ddbj:BAA75341.1; (AB011837) sorbitol dehydrogenase [Bacillus; E=8e-44 swissprot:P77539; YDJL_ECOLI HYPOTHETICAL ZINC-TYPE ALCOHOL; E=7e-35 gb:AAG56765.1; AE005400_10 (AE005400) oxidoreductase; E=9e-35 COG: BH0189; COG1063 Threonine dehydrogenase and related Zn-dependent; E=7e-45 PFAM: PF00107; Zinc-binding dehydrogenases; E=6.5e-60; zinc-type alcohol dehydrogenase 2747272..2748462 Rhodopirellula baltica SH 1 1794563 NP_866633.1 CDS RB5321 NC_005027.1 2748548 2749432 D PMID: 11997336 best DB hits: BLAST: swissprot:P42418; IOLH_BACSU IOLH PROTEIN ----- pir: H69645; E=0.061 swissprot:P49304; MOCC_RHIME RHIZOPINE CATABOLISM PROTEIN MOCC; E=0.20 pir:F72378; conserved hypothetical protein - Thermotoga maritima; E=0.28 COG: BS_iolH; COG1082 Predicted endonucleases; E=0.006 PFAM: PF00631; GGL domain; E=0.31; myo-inositol catabolism protein IolH 2748548..2749432 Rhodopirellula baltica SH 1 1791668 NP_866634.1 CDS RB5323 NC_005027.1 2749365 2750459 D PMID: 7610479 best DB hits: BLAST: embl:CAB09645.1; (Z96801) hypothetical protein MLCL581.26; E=7e-04 pir:H81408; probable periplasmic protein Cj0609c [imported] -; E=0.41 PFAM: PF00657; Lipase/Acylhydrolase with GDSL-; E=0.63 PF00815; Histidinol dehydrogenase; E=0.3; lipolytic enzyme 2749365..2750459 Rhodopirellula baltica SH 1 1794884 NP_866635.1 CDS RB5326 NC_005027.1 2750603 2753251 D hypothetical protein 2750603..2753251 Rhodopirellula baltica SH 1 1790529 NP_866636.1 CDS RB5328 NC_005027.1 2753241 2754698 D hypothetical protein 2753241..2754698 Rhodopirellula baltica SH 1 1793685 NP_866637.1 CDS RB5332 NC_005027.1 2754863 2755486 R PMID: 8159166 best DB hits: BLAST: pir:S41581; probable phosphoesterase (EC 3.1.-.-) U - Methanothermus; E=6e-04 pir:T35512; hypothetical protein SC6G10.03c - Streptomyces; E=0.002 pir:H69118; probable phosphoesterase (EC 3.1.-.-) MTH1882 -; E=0.016 COG: MTH1882; COG2129 Predicted phosphoesterases, related to the Icc; E=0.001; phosphoesterase complement(2754863..2755486) Rhodopirellula baltica SH 1 1794494 NP_866638.1 CDS RB5334 NC_005027.1 2755483 2757501 R best DB hits: BLAST: embl:CAB75387.1; (AL139298) hypothetical protein [Streptomyces; E=1e-110 pir:H72336; conserved hypothetical protein - Thermotoga maritima; E=1e-103 pir:S77440; hypothetical protein sll1084 - Synechocystis sp. (strain; E=2e-93 COG: TM0770; COG1032 Fe-S oxidoreductases family 2; E=1e-104 slr0082; COG0621 Fe-S oxidoreductases family 1; E=0.008; Fe-S oxidoreductase complement(2755483..2757501) Rhodopirellula baltica SH 1 1791621 NP_866639.1 CDS nasE NC_005027.1 2757501 2757821 D PMID: 7868621 best DB hits: BLAST: swissprot:P42436; NASE_BACSU ASSIMILATORY NITRITE REDUCTASE; E=9e-09 pir:T35995; probable dioxygenase (EC 1.14.12.-) Rieske iron-sulfur; E=1e-08 ddbj:BAB04333.1; (AP001509) assimilatory nitrite reductase; E=1e-08 COG: BS_nasE; COG2146 Ferredoxin subunits of nitrite reductase and; E=9e-10 BH1672; COG0723 Rieske Fe-S protein; E=6e-05 XF1472; COG2146 Ferredoxin subunits of nitrite reductase and; E=6e-04 PFAM: PF00355; Rieske [2Fe-2S] domain; E=7.6e-20; assimilatory nitrite reductase [NAD(P)H] small subunit 2757501..2757821 Rhodopirellula baltica SH 1 1793874 NP_866640.1 CDS RB5340 NC_005027.1 2757894 2760800 D PMID: 11823852 best DB hits: BLAST: pir:A64656; hypothetical protein HP1089 - Helicobacter pylori; E=0.12 pir:C71944; hypothetical protein jhp0336 - Helicobacter pylori; E=0.76 ddbj:BAB06700.1; (AP001517) BH2981~unknown [Bacillus halodurans]; E=0.77; hypothetical protein 2757894..2760800 Rhodopirellula baltica SH 1 1796321 NP_866641.1 CDS RB5343 NC_005027.1 2760797 2763571 D best DB hits: BLAST: pir:F81294; probable helicase Cj1481c [imported] - Campylobacter; E=5e-27 pir:A71805; probable ATP-dependent helicase - Helicobacter pylori; E=5e-15 pir:A64714; helicase - Helicobacter pylori (strain 26695) -----; E=2e-14 COG: Cj1481c; COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit; E=4e-28 VC0190; COG0210 Superfamily I DNA and RNA helicases; E=3e-09 CT639; COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit; E=4e-08 PFAM: PF00580; UvrD/REP helicase; E=2.9e-18 PF01443; Viral (Superfamily 1) RNA hel; E=0.085; helicase 2760797..2763571 Rhodopirellula baltica SH 1 1791944 NP_866642.1 CDS RB5346 NC_005027.1 2763847 2764293 D PMID: 8253675 best DB hits: BLAST: pir:E75550; probable transposase - Deinococcus radiodurans (strain; E=6e-06 pir:F64571; hypothetical protein SARA17 - Helicobacter pylori; E=3e-05 gb:AAG59402.1; AE005653_3 (AE005653) transposase; E=6e-05 COG: DR0177; COG1943 Predicted transposase; E=5e-07 PFAM: PF01797; Transposase IS200 like; E=7.8e-08; transposase 2763847..2764293 Rhodopirellula baltica SH 1 1790689 NP_866643.1 CDS RB5347 NC_005027.1 2764290 2764442 D hypothetical protein 2764290..2764442 Rhodopirellula baltica SH 1 1794131 NP_866644.1 CDS RB5348 NC_005027.1 2764414 2765787 R PMID: 11292750 best DB hits: BLAST: swissprot:P03835; YI41_ECOLI INSERTION ELEMENT IS4 HYPOTHETICAL; E=0.030 embl:CAA57483.1; (X81894) ORF [Enterobacter agglomerans]; E=0.064 COG: yi41; COG3385 Predicted transposase; E=0.003; transposase complement(2764414..2765787) Rhodopirellula baltica SH 1 1794238 NP_866645.1 CDS RB5350 NC_005027.1 2765764 2765985 D hypothetical protein 2765764..2765985 Rhodopirellula baltica SH 1 1795044 NP_866646.1 CDS RB5351 NC_005027.1 2766129 2766854 D hypothetical protein 2766129..2766854 Rhodopirellula baltica SH 1 1795717 NP_866647.1 CDS RB5353 NC_005027.1 2766367 2767221 R signal peptide complement(2766367..2767221) Rhodopirellula baltica SH 1 1792708 NP_866648.1 CDS RB5356 NC_005027.1 2767081 2768349 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein 2767081..2768349 Rhodopirellula baltica SH 1 1791989 NP_866649.1 CDS RB5359 NC_005027.1 2768429 2769349 D hypothetical protein 2768429..2769349 Rhodopirellula baltica SH 1 1793631 NP_866650.1 CDS RB5362 NC_005027.1 2769388 2769513 D hypothetical protein 2769388..2769513 Rhodopirellula baltica SH 1 1792533 NP_866651.1 CDS RB5363 NC_005027.1 2769535 2770170 D PMID: 1991710 best DB hits: BLAST: swissprot:O67866; FLAV_AQUAE FLAVODOXIN ----- pir: F70479; E=3e-48 swissprot:P18855; FLAV_CLOAB FLAVODOXIN ----- pir: A38177; E=2e-13 pir:G82110; Trp repressor-binding protein VC2166 [imported] - Vibrio; E=6e-13 COG: aq_2096; COG0655 Multimeric flavodoxin WrbA; E=3e-49 AF1520; COG0426 Uncharacterized flavoproteins; E=0.006 PFAM: PF00258; Flavodoxin; E=1.4e-08; flavodoxin 2769535..2770170 Rhodopirellula baltica SH 1 1796335 NP_866652.1 CDS RB5365 NC_005027.1 2770233 2771630 D best DB hits: BLAST: gb:AAC23913.1; (AF039207) NADH-dependent dehydrogenase homolog; E=4e-10 gb:AAC31181.1; (AF076240) unknown [Rhizobium leguminosarum bv.; E=2e-09 ddbj:BAB05884.1; (AP001514) BH2165~unknown conserved protein; E=6e-09 COG: BH2165; COG0673 Predicted dehydrogenases and related proteins; E=5e-10 PFAM: PF01408; Oxidoreductase, NAD-bin; E=3.1e-15; NADH-dependent dehydrogenase 2770233..2771630 Rhodopirellula baltica SH 1 1794731 NP_866653.1 CDS RB5367 NC_005027.1 2771651 2773393 R PMID: 2105293 best DB hits: BLAST: gb:AAG60934.1; AF322013_53 (AF322013) ID556 [Bradyrhizobium; E=9e-68 gb:AAG60822.1; AF322012_127 (AF322013) ID270 [Bradyrhizobium; E=4e-67 swissprot:P17867; CISA_BACSU DNA RECOMBINASE -----; E=1e-30 COG: BS_spoIVCA; COG1961 Site-specific recombinases, DNA invertase Pin; E=1e-31 pin; COG1961 Site-specific recombinases, DNA invertase Pin homologs; E=4e-04 PH1174; COG1961 Site-specific recombinases, DNA invertase Pin; E=0.003 PFAM: PF00239; Resolvase class of site-specific re; E=4.3e-18; DNA recombinase complement(2771651..2773393) Rhodopirellula baltica SH 1 1790895 NP_866654.1 CDS RB5368 NC_005027.1 2773390 2773587 R hypothetical protein complement(2773390..2773587) Rhodopirellula baltica SH 1 1792885 NP_866655.1 CDS RB5369 NC_005027.1 2773636 2773896 R hypothetical protein complement(2773636..2773896) Rhodopirellula baltica SH 1 1792894 NP_866656.1 CDS RB5370 NC_005027.1 2773897 2774826 R PMID: 11759840 best DB hits: BLAST: embl:CAB93418.1; (AL357524) transposase [Streptomyces; E=0.60; transposase complement(2773897..2774826) Rhodopirellula baltica SH 1 1797020 NP_866657.1 CDS RB5371 NC_005027.1 2774829 2775158 D hypothetical protein 2774829..2775158 Rhodopirellula baltica SH 1 1790866 NP_866658.1 CDS RB5373 NC_005027.1 2775270 2775404 R hypothetical protein complement(2775270..2775404) Rhodopirellula baltica SH 1 1790878 NP_866659.1 CDS RB5374 NC_005027.1 2775439 2776053 R best DB hits: PFAM: PF00515; TPR Domain; E=0.61; hypothetical protein complement(2775439..2776053) Rhodopirellula baltica SH 1 1793132 NP_866660.1 CDS RB5377 NC_005027.1 2776104 2776583 R signal peptide complement(2776104..2776583) Rhodopirellula baltica SH 1 1791034 NP_866661.1 CDS RB5378 NC_005027.1 2776699 2778171 R PMID: 10336424 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=2e-36 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=2e-34 gb:AAF30402.1; AF109924_1 (AF109924) sulfatase 1 precursor [Helix; E=1e-33 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=1e-29 PFAM: PF02418; Integral membrane protein of unk; E=0.83 PF00884; Sulfatase; E=6.6e-32; aryl-sulphate sulphohydrolase complement(2776699..2778171) Rhodopirellula baltica SH 1 1791365 NP_866662.1 CDS RB5380 NC_005027.1 2778338 2779759 R PMID: 8063104 best DB hits: BLAST: pir:H69064; serinethreonine protein kinase related protein -; E=9e-06 swissprot:P54741; AFSK_STRCO SERINETHREONINE PROTEIN KINASE AFSK; E=0.007 swissprot:P54742; AFSK_STRGR SERINETHREONINE PROTEIN KINASE AFSK; E=0.007 COG: MTH1485; COG1520 Uncharacterized proteins of WD40-like repeat family; E=8e-07 PFAM: PF01011; PQQ enzyme repeat; E=0.0098; serine/threonine protein kinase complement(2778338..2779759) Rhodopirellula baltica SH 1 1790644 NP_866663.1 CDS RB5383 NC_005027.1 2779695 2781371 R PMID: 10950929 best DB hits: BLAST: pir:F70837; probable sulfatase (EC 3.1.6.-) atsG - Mycobacterium; E=8e-23 gb:AAG41945.1; AF304053_1 (AF304053) heparan N-sulfatase [Mus; E=1e-20 gb:AAF29467.1; (AF156255) N-sulfoglucosamine sulfohydrolase [Mus; E=2e-20 COG: Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=8e-24 PFAM: PF00884; Sulfatase; E=5.2e-13; sulfatase atsG complement(2779695..2781371) Rhodopirellula baltica SH 1 1792430 NP_866664.1 CDS RB5385 NC_005027.1 2781546 2781656 R hypothetical protein complement(2781546..2781656) Rhodopirellula baltica SH 1 1793542 NP_866665.1 CDS RB5387 NC_005027.1 2781669 2782331 R hypothetical protein complement(2781669..2782331) Rhodopirellula baltica SH 1 1792584 NP_866666.1 CDS RB5389 NC_005027.1 2782443 2782853 R hypothetical protein complement(2782443..2782853) Rhodopirellula baltica SH 1 1791557 NP_866667.1 CDS RB5390 NC_005027.1 2782834 2782980 R hypothetical protein complement(2782834..2782980) Rhodopirellula baltica SH 1 1796350 NP_866668.1 CDS RB5391 NC_005027.1 2782952 2783086 D hypothetical protein 2782952..2783086 Rhodopirellula baltica SH 1 1795870 NP_866669.1 CDS tyrA NC_005027.1 2783068 2784183 D PMID: 3106153 best DB hits: BLAST: pir:A81199; prephenate dehydrogenase, probable NMB0440 [imported] -; E=2e-23 pir:A81775; probable oxidoreductase NMA2045 [imported] - Neisseria; E=6e-23 gb:AAF06694.1; AF163663_19 (AF058689) prephenate; E=3e-22 COG: NMB0440; COG0287 Prephenate dehydrogenase; E=2e-24 PFAM: PF02153; Prephenate dehydrogenase; E=5.3e-69; prephenate dehydrogenase 2783068..2784183 Rhodopirellula baltica SH 1 1792302 NP_866670.1 CDS purL NC_005027.1 2784253 2787282 D PMID: 2659070 PMID: 2531746 best DB hits: BLAST: gb:AAB89311.1; (AE000969) phosphoribosylformylglycinamidine; E=1e-113 embl:CAC12194.1; (AL445066) phosphoribosylformylglycinamidine; E=1e-102 embl:CAB56359.1; (AL118514) phosphoribosyl formylglycinamidine; E=1e-80 COG: AF1940; COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase,; E=1e-114 NMB1996_1; COG0046 Phosphoribosylformylglycinamidine (FGAM); E=2e-52 TM1246; COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase,; E=1e-50 PFAM: PF00586; AIR synthase related protein, N-term; E=1e-24 PF02769; AIR synthase related protein, C-term; E=1.7e-22 PF00586; AIR synthase related protein, N-term; E=0.28; phosphoribosylformylglycinamidine synthase II 2784253..2787282 Rhodopirellula baltica SH 1 1794655 NP_866671.1 CDS RB5396 NC_005027.1 2787332 2787904 D hypothetical protein 2787332..2787904 Rhodopirellula baltica SH 1 1796109 NP_866672.1 CDS RB5399 NC_005027.1 2788006 2789016 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 2788006..2789016 Rhodopirellula baltica SH 1 1794630 NP_866673.1 CDS RB5401 NC_005027.1 2789017 2790207 R hypothetical protein complement(2789017..2790207) Rhodopirellula baltica SH 1 1795109 NP_866674.1 CDS RB5403 NC_005027.1 2790208 2790360 R hypothetical protein complement(2790208..2790360) Rhodopirellula baltica SH 1 1795791 NP_866675.1 CDS RB5404 NC_005027.1 2790381 2791475 R best DB hits: BLAST: embl:CAB76850.1; (AL049698) dJ470B24.1.3 (myeloidlymphoid or; E=0.73 embl:CAB76849.1; (AL049698) dJ470B24.1.5 (myeloidlymphoid or; E=0.78; hypothetical protein complement(2790381..2791475) Rhodopirellula baltica SH 1 1792144 NP_866676.1 CDS mthfs NC_005027.1 2791576 2792193 R PMID: 8034591 PMID: 8522195 best DB hits: BLAST: ddbj:BAB05136.1; (AP001512) 5-formyltetrahydrofolate cyclo-ligase; E=7e-17 pir:C70449; conserved hypothetical protein aq_1731 - Aquifex; E=3e-16 swissprot:P54491; YQGN_BACSU HYPOTHETICAL 21.4 KD PROTEIN IN; E=8e-14 COG: BH1417; COG0212 5-formyltetrahydrofolate cyclo-ligase; E=7e-18 PFAM: PF01812; 5-formyltetrahydrofolate cyclo; E=1.4e-38; 5-formyltetrahydrofolate cyclo-ligase complement(2791576..2792193) Rhodopirellula baltica SH 1 1794617 NP_866677.1 CDS RB5406 NC_005027.1 2792209 2793894 R PMID: 1659648 best DB hits: BLAST: gb:AAF01486.1; AF137263_5 (AF137263) L-fuculose kinase; E=1e-84 ddbj:BAB05270.1; (AP001512) rhamnulokinase [Bacillus halodurans]; E=3e-79 pir:E70014; rhamnulokinase (EC 2.7.1.5) yulC - Bacillus subtilis; E=8e-75 COG: BH1551; COG1070 Sugar (pentulose and hexulose) kinases; E=2e-80 VNG1967G; COG0554 Glycerol kinase; E=2e-04 BH2676; COG1070 Sugar (pentulose and hexulose) kinases; E=0.004 PFAM: PF00370; FGGY family of carbohydrate kin; E=7.3e-12 PF02782; FGGY family of carbohydrate kin; E=0.11; carbohydrate kinase complement(2792209..2793894) Rhodopirellula baltica SH 1 1790838 NP_866678.1 CDS RB5407 NC_005027.1 2793914 2794132 D hypothetical protein 2793914..2794132 Rhodopirellula baltica SH 1 1790360 NP_866679.1 CDS RB5409 NC_005027.1 2794195 2794488 D hypothetical protein 2794195..2794488 Rhodopirellula baltica SH 1 1795039 NP_866680.1 CDS RB5411 NC_005027.1 2794516 2794623 D hypothetical protein 2794516..2794623 Rhodopirellula baltica SH 1 1794061 NP_866681.1 CDS RB5412 NC_005027.1 2794620 2794838 R hypothetical protein complement(2794620..2794838) Rhodopirellula baltica SH 1 1790856 NP_866682.1 CDS rpoB NC_005027.1 2794930 2798715 D PMID: 6266829 best DB hits: BLAST: swissprot:Q9Z9A0; RPOB_CHLPN DNA-DIRECTED RNA POLYMERASE BETA CHAIN; E=0.0 pir:F81548; DNA-directed RNA polymerase, beta chain CP0694 [imported]; E=0.0 ddbj:BAA98291.1; (AP002545) RNA polymerase beta [Chlamydophila; E=0.0 COG: CPn0081; COG0085 DNA-directed RNA polymerase beta subunit/140 kD; E=0.0 CT315; COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; E=0.0 PA4270; COG0085 DNA-directed RNA polymerase beta subunit/140 kD; E=0.0 PFAM: PF01155; Hydrogenase expression/synthesi; E=0.17 PF00562; RNA polymerase beta subunit; E=0; DNA-directed RNA polymerase beta chain 2794930..2798715 Rhodopirellula baltica SH 1 1794544 NP_866683.1 CDS RB5415 NC_005027.1 2798737 2798925 D hypothetical protein 2798737..2798925 Rhodopirellula baltica SH 1 1790343 NP_866684.1 CDS rpoC NC_005027.1 2798945 2803234 D PMID: 3219133 best DB hits: BLAST: swissprot:P19176; RPOC_PSEPU DNA-DIRECTED RNA POLYMERASE BETA' CHAIN; E=0.0 swissprot:P00577; RPOC_ECOLI DNA-DIRECTED RNA POLYMERASE BETA' CHAIN; E=0.0 prf:0808241A; polymerase beta',RNA [Escherichia coli]; E=0.0 COG: rpoC; COG0086 DNA-directed RNA polymerase beta' subunit/160 kD subunit; E=0.0 BU033; COG0086 DNA-directed RNA polymerase beta' subunit/160 kD; E=0.0 PFAM: PF00623; RNA polymerase alpha subunit; E=2.3e-275 PF01854; RNA polymerase A/beta'/A sub; E=8.5e-10 PF01333; Apocytochrome F; E=0.26; DNA-directed RNA polymerase beta chain 2798945..2803234 Rhodopirellula baltica SH 1 1793800 NP_866685.1 CDS RB5417 NC_005027.1 2803525 2804967 D PMID: 2303452 best DB hits: BLAST: gb:AAF49287.1; (AE003522) CG7402 gene product [Drosophila; E=1e-37 gb:AAF30402.1; AF109924_1 (AF109924) sulfatase 1 precursor [Helix; E=2e-37 gb:AAF49302.1; (AE003522) CG5584 gene product [Drosophila; E=9e-37 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=2e-28 PFAM: PF00884; Sulfatase; E=1.5e-44; N-acetylgalactosamine-6-sulfatase 2803525..2804967 Rhodopirellula baltica SH 1 1792861 NP_866686.1 CDS RB5418 NC_005027.1 2804964 2805185 R signal peptide complement(2804964..2805185) Rhodopirellula baltica SH 1 1792862 NP_866687.1 CDS RB5420 NC_005027.1 2805142 2805657 D PMID: 11743193 best DB hits: PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=0.00066; hypothetical protein 2805142..2805657 Rhodopirellula baltica SH 1 1791850 NP_866688.1 CDS RB5421 NC_005027.1 2805590 2807302 D PMID: 9406417 PMID: 11157277 best DB hits: BLAST: pir:T18266; cycloinulo-oligosaccharide fructanotransferase (EC; E=0.10 gb:AAG47946.1; AF222787_1 (AF222787) cycloinulo-oligosaccharide; E=0.22; cycloinulo-oligosaccharide fructanotransferase 2805590..2807302 Rhodopirellula baltica SH 1 1790389 NP_866689.1 CDS RB5424 NC_005027.1 2807339 2809060 D PMID: 8244397 best DB hits: BLAST: gb:AAA16877.1; (L13329) iduronate-2-sulfatase [Homo sapiens]; E=5e-57 gb:AAB33747.1; iduronate-2-sulfatase, IDS {EC 3.1.6.13} [human,; E=2e-56 gb:AAA37880.1; (L07921) iduronate sulfatase [Mus musculus]; E=5e-54 COG: PA0031; COG3119 Arylsulfatase A and related enzymes; E=1e-30 PA0924; COG3083 Predicted hydrolase of alkaline phosphatase; E=9e-05 BS_yfnI; COG1368 Phosphoglycerol transferase and related proteins,; E=0.001 PFAM: PF00884; Sulfatase; E=2.6e-28 PF02418; Integral membrane protein of unknow; E=0.71 PF00884; Sulfatase; E=3.1e-27; iduronate-2-sulfatase 2807339..2809060 Rhodopirellula baltica SH 1 1793225 NP_866690.1 CDS RB5426 NC_005027.1 2809030 2811849 D hypothetical protein 2809030..2811849 Rhodopirellula baltica SH 1 1793557 NP_866691.1 CDS RB5428 NC_005027.1 2811866 2813368 D hypothetical protein 2811866..2813368 Rhodopirellula baltica SH 1 1791512 NP_866692.1 CDS RB5429 NC_005027.1 2813478 2814860 R PMID: 10360571 best DB hits: BLAST: pir:D72313; hypothetical protein TM0945 - Thermotoga maritima; E=2e-46 pir:D82689; conserved hypothetical protein XF1384 [imported] -; E=4e-22 gb:AAF04097.1; AF188291_3 (AF188291) PqaA [Salmonella typhi]; E=2e-17; hypothetical protein complement(2813478..2814860) Rhodopirellula baltica SH 1 1793561 NP_866693.1 CDS RB5430 NC_005027.1 2814809 2814997 R best DB hits: PFAM: PF02822; Antistasin family; E=0.39; hypothetical protein complement(2814809..2814997) Rhodopirellula baltica SH 1 1795745 NP_866694.1 CDS RB5432 NC_005027.1 2815149 2815646 D PMID: 10360571 best DB hits: BLAST: pir:A72342; conserved hypothetical protein - Thermotoga maritima; E=9e-41 pir:H70472; conserved hypothetical protein aq_2013 - Aquifex; E=2e-30 pir:B71118; hypothetical protein PH0713 - Pyrococcus horikoshii; E=2e-16 COG: TM0723; COG0432 Uncharacterized ACR; E=9e-42 PFAM: PF01894; Uncharacterised protein family UPF00; E=9.2e-38; hypothetical protein 2815149..2815646 Rhodopirellula baltica SH 1 1794271 NP_866695.1 CDS RB5433 NC_005027.1 2815643 2815819 D hypothetical protein 2815643..2815819 Rhodopirellula baltica SH 1 1796240 NP_866696.1 CDS fusA NC_005027.1 2815776 2817863 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(2815776..2817863) Rhodopirellula baltica SH 1 1792398 NP_866697.1 CDS RB5435 NC_005027.1 2817808 2818044 D signal peptide 2817808..2818044 Rhodopirellula baltica SH 1 1790927 NP_866698.1 CDS pnp NC_005027.1 2818164 2819081 D catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase 2818164..2819081 Rhodopirellula baltica SH 1 1793089 NP_866699.1 CDS fwdC NC_005027.1 2819062 2819814 D PMID: 8575452 best DB hits: BLAST: swissprot:O87391; GLXC_RHIME GLXC PROTEIN ----- gb: AAC62221.1; E=1e-15 pir:C69123; tungsten formylmethanofuran dehydrogenase, subunit C; E=7e-13 swissprot:Q58571; FWDC_METJA TUNGSTEN-CONTAINING; E=1e-11 COG: MTH192; COG0070 Glutamate synthetase domain 3; E=7e-14 MJ1171; COG2218 Formylmethanofuran dehydrogenase subunit C; E=1e-12 MJ1350; COG0070 Glutamate synthetase domain 3; E=5e-08 PFAM: PF01493; Domain of unknown function DUF14; E=2.1e-09; tungsten formylmethanofuran dehydrogenase, subunit C-like protein 2819062..2819814 Rhodopirellula baltica SH 1 1792874 NP_866700.1 CDS RB5442 NC_005027.1 2819950 2821104 R hypothetical protein complement(2819950..2821104) Rhodopirellula baltica SH 1 1792290 NP_866701.1 CDS metK NC_005027.1 2821246 2822433 D methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 2821246..2822433 Rhodopirellula baltica SH 1 1794938 NP_866702.1 CDS RB5445 NC_005027.1 2822354 2823322 D PMID: 8260624 best DB hits: BLAST: embl:CAB08432.1; (Z95151) Icc [Mycobacterium leprae]; E=0.062 pir:S44374; phosphoglycerate mutase (EC 5.4.2.1) - castor bean; E=0.20 swissprot:Q42908; PMGI_MESCR 2,3-BISPHOSPHOGLYCERATE-INDEPENDENT; E=0.22; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2822354..2823322 Rhodopirellula baltica SH 1 1792654 NP_866703.1 CDS RB5447 NC_005027.1 2823580 2823756 D hypothetical protein 2823580..2823756 Rhodopirellula baltica SH 1 1795185 NP_866704.1 CDS RB5448 NC_005027.1 2823795 2824412 R hypothetical protein complement(2823795..2824412) Rhodopirellula baltica SH 1 1791990 NP_866705.1 CDS RB5449 NC_005027.1 2824383 2824532 D hypothetical protein 2824383..2824532 Rhodopirellula baltica SH 1 1793735 NP_866706.1 CDS RB5450 NC_005027.1 2824513 2824635 D hypothetical protein 2824513..2824635 Rhodopirellula baltica SH 1 1795409 NP_866707.1 CDS RB5451 NC_005027.1 2824632 2825756 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein 2824632..2825756 Rhodopirellula baltica SH 1 1789961 NP_866708.1 CDS RB5454 NC_005027.1 2825855 2826199 R hypothetical protein complement(2825855..2826199) Rhodopirellula baltica SH 1 1790302 NP_866709.1 CDS RB5455 NC_005027.1 2826045 2826395 D hypothetical protein 2826045..2826395 Rhodopirellula baltica SH 1 1793536 NP_866710.1 CDS RB5456 NC_005027.1 2826426 2826983 R signal peptide complement(2826426..2826983) Rhodopirellula baltica SH 1 1793954 NP_866711.1 CDS RB5457 NC_005027.1 2827115 2827360 D hypothetical protein 2827115..2827360 Rhodopirellula baltica SH 1 1791974 NP_866712.1 CDS RB5458 NC_005027.1 2827385 2827831 D signal peptide 2827385..2827831 Rhodopirellula baltica SH 1 1791258 NP_866713.1 CDS RB5460 NC_005027.1 2827930 2828544 R signal peptide complement(2827930..2828544) Rhodopirellula baltica SH 1 1790412 NP_866714.1 CDS RB5462 NC_005027.1 2828717 2829001 R hypothetical protein complement(2828717..2829001) Rhodopirellula baltica SH 1 1794091 NP_866715.1 CDS RB5464 NC_005027.1 2829125 2829445 D hypothetical protein 2829125..2829445 Rhodopirellula baltica SH 1 1792311 NP_866716.1 CDS RB5465 NC_005027.1 2829449 2830423 D PMID: 7699720 best DB hits: BLAST: pir:D83041; probable two-component response regulator PA4843; E=4e-20 pir:F82960; hypothetical protein PA5487 [imported] - Pseudomonas; E=5e-18 pir:A82428; sensory boxGGDEF family protein VCA0697 [imported] -; E=4e-17 COG: PA5487; COG2199 Diguanylate cyclase/phosphodiesterase domain 1; E=5e-19 PFAM: PF00072; Response regulator receiver doma; E=3.1e-13 PF00990; GGDEF domain; E=3.1e-35; two-component response regulator 2829449..2830423 Rhodopirellula baltica SH 1 1790426 NP_866717.1 CDS RB5466 NC_005027.1 2830396 2830512 D hypothetical protein 2830396..2830512 Rhodopirellula baltica SH 1 1790370 NP_866718.1 CDS RB5468 NC_005027.1 2830492 2831490 R PMID: 10567266 best DB hits: PFAM: PF00561; alpha/beta hydrolase fold; E=0.1; signal peptide complement(2830492..2831490) Rhodopirellula baltica SH 1 1794336 NP_866719.1 CDS RB5471 NC_005027.1 2831653 2832027 R PMID: 1645442 best DB hits: BLAST: pir:S75664; sensory transduction system regulatory protein slr1983 -; E=8e-04 pir:G83183; probable chemotaxis sensoreffector fusion protein; E=0.002 pir:D82696; hypothetical protein XF1330 [imported] - Xylella; E=0.005 COG: slr1983_2; COG0784 CheY-like receiver domains; E=8e-05 jhp1283; COG0745 Response regulators consisting of a CheY-like; E=8e-04 BS_yufM; COG2197 Response regulators consisting of a CheY-like; E=0.002 PFAM: PF00072; Response regulator receiver doma; E=9.9e-06; sensory transduction system regulatory protein complement(2831653..2832027) Rhodopirellula baltica SH 1 1792989 NP_866720.1 CDS RB5472 NC_005027.1 2832015 2832428 R PMID: 1454550 best DB hits: BLAST: embl:CAB94653.1; (AL359215) two-component system; E=3e-12 pir:D72374; response regulator - Thermotoga maritima (strain MSB8); E=2e-11 embl:CAC04498.1; (AL391588) two-component system; E=5e-11 COG: TM0468; COG0784 CheY-like receiver domains; E=2e-12 BS_phoP; COG0745 Response regulators consisting of a CheY-like; E=3e-11 slr0322_3; COG0784 CheY-like receiver domains; E=3e-10 PFAM: PF00072; Response regulator receiver doma; E=9.1e-23; two-component system response regulator complement(2832015..2832428) Rhodopirellula baltica SH 1 1796767 NP_866721.1 CDS RB5474 NC_005027.1 2832627 2832782 D hypothetical protein 2832627..2832782 Rhodopirellula baltica SH 1 1792651 NP_866722.1 CDS RB5475 NC_005027.1 2832768 2833076 R hypothetical protein complement(2832768..2833076) Rhodopirellula baltica SH 1 1792078 NP_866723.1 CDS RB5476 NC_005027.1 2833159 2833284 R hypothetical protein complement(2833159..2833284) Rhodopirellula baltica SH 1 1790978 NP_866724.1 CDS RB5477 NC_005027.1 2833363 2833992 R PMID: 1454550 best DB hits: BLAST: pir:T17197; adenylate cyclase homolog - Spirulina platensis -----; E=2e-09 gb:AAD30120.2; (AF135389) DNA binding response regulator RpaA; E=2e-08 pir:S75923; sensory transduction system regulatory protein sll1555 -; E=4e-08 COG: slr2024; COG0784 CheY-like receiver domains; E=9e-09 slr0115; COG0745 Response regulators consisting of a CheY-like; E=1e-08 TP0519; COG2204 AAA superfamily ATPases with N-terminal receiver; E=2e-08 PFAM: PF00072; Response regulator receiver doma; E=2.4e-10; two component system response regulator complement(2833363..2833992) Rhodopirellula baltica SH 1 1794692 NP_866725.1 CDS RB5478 NC_005027.1 2834064 2834459 R PMID: 7699720 best DB hits: BLAST: embl:CAB88489.1; (AL353816) two-component systen; E=1e-15 gb:AAB06615.1; (U53173) MviA [Salmonella typhimurium]; E=2e-14 gb:AAD30120.2; (AF135389) DNA binding response regulator RpaA; E=1e-13 COG: slr0115; COG0745 Response regulators consisting of a CheY-like; E=1e-13 XF1952_3; COG0784 CheY-like receiver domains; E=3e-13 Rv0981; COG0745 Response regulators consisting of a CheY-like; E=3e-12 PFAM: PF00072; Response regulator receiver doma; E=2.4e-27; two-component system response regulator complement(2834064..2834459) Rhodopirellula baltica SH 1 1790570 NP_866726.1 CDS RB5479 NC_005027.1 2834555 2836279 R PMID: 3142862 best DB hits: BLAST: swissprot:P23545; PHOR_BACSU ALKALINE PHOSPHATASE SYNTHESIS SENSOR; E=1e-28 pir:S75514; sensory transduction histidine kinase slr1324 -; E=2e-27 pir:E83529; sensorresponse regulator hybrid PA0928 [imported] -; E=6e-25 COG: BS_phoR_3; COG0642 Sensory transduction histidine kinases; E=1e-29 PFAM: PF00072; Response regulator receiver do; E=4.5e-14 PF00512; His Kinase A (phosphoacceptor); E=6.3e-16 PF02518; Histidine kinase-, DNA gyrase; E=5.3e-31; sensory transduction histidine kinase complement(2834555..2836279) Rhodopirellula baltica SH 1 1795646 NP_866727.1 CDS RB5482 NC_005027.1 2836143 2836799 R PMID: 7699720 best DB hits: BLAST: ddbj:BAA14000.1; (D89625) adenylate cyclase [Anabaena sp.]; E=2e-12 pir:T17197; adenylate cyclase homolog - Spirulina platensis -----; E=8e-12 gb:AAB89775.1; (AE001001) response regulator [Archaeoglobus; E=7e-10 COG: AF1473; COG0784 CheY-like receiver domains; E=7e-11 slr0115; COG0745 Response regulators consisting of a CheY-like; E=2e-10 sll1555_1; COG0784 CheY-like receiver domains; E=6e-10 PFAM: PF00072; Response regulator receiver doma; E=2.3e-16; response regulator complement(2836143..2836799) Rhodopirellula baltica SH 1 1792107 NP_866728.1 CDS RB5485 NC_005027.1 2836850 2837047 R hypothetical protein complement(2836850..2837047) Rhodopirellula baltica SH 1 1796890 NP_866729.1 CDS RB5486 NC_005027.1 2837058 2838266 D PMID: 10200516 best DB hits: BLAST: swissprot:Q94775; GBLP_TRYBB GUANINE NUCLEOTIDE-BINDING PROTEIN; E=0.14 pir:T47324; hypothetical protein T12K4.110 - Arabidopsis thaliana; E=0.29 gb:AAC72849.1; (AF100286) activated protein kinase C receptor; E=0.58 PFAM: PF00400; WD domain, G-beta repeat; E=0.0071; activated protein kinase C receptor-like protein 2837058..2838266 Rhodopirellula baltica SH 1 1795626 NP_866730.1 CDS RB5490 NC_005027.1 2838414 2841692 R best DB hits: BLAST: pir:F82263; probable multidrug resistance protein VC0914 [imported] -; E=1e-47 pir:H82300; probable multidrug resistance protein VC0629 [imported] -; E=6e-47 pir:F71727; acriflavin resistance protein D (acrD) RP170 - Rickettsia; E=3e-45 COG: VC0914; COG0841 Cation/multidrug efflux pump; E=1e-48 PFAM: PF00873; AcrB/AcrD/AcrF family; E=1.8e-14; multidrug resistance protein complement(2838414..2841692) Rhodopirellula baltica SH 1 1793884 NP_866731.1 CDS RB5495 NC_005027.1 2841689 2843398 R best DB hits: BLAST: pir:A83342; conserved hypothetical protein PA2430 [imported] -; E=4e-07 swissprot:P32716; YJCR_ECOLI HYPOTHETICAL 36.9 KDA PROTEIN IN; E=2e-05 gb:AAG59280.1; AE005641_5 (AE005641) membrane protein; E=2e-05 COG: PA2430; COG1566 Multidrug resistance efflux pump; E=4e-08 HIN0311; COG0845 Membrane-fusion protein; E=0.002 PFAM: PF00529; HlyD family secretion protein; E=0.00042; multidrug resistance efflux pump complement(2841689..2843398) Rhodopirellula baltica SH 1 1792419 NP_866732.1 CDS RB5498 NC_005027.1 2843397 2843672 D hypothetical protein 2843397..2843672 Rhodopirellula baltica SH 1 1795663 NP_866733.1 CDS RB5499 NC_005027.1 2843655 2844998 R best DB hits: BLAST: ddbj:BAB07052.1; (AP001518) BH3333~unknown conserved protein in; E=8e-21 embl:CAC10313.1; (AL442629) hypothetical protein SCH63.22c; E=0.76; hypothetical protein complement(2843655..2844998) Rhodopirellula baltica SH 1 1793834 NP_866734.1 CDS RB5500 NC_005027.1 2845019 2845759 R PMID: 9665876 best DB hits: BLAST: swissprot:O83487; Y474_TREPA HYPOTHETICAL PROTEIN TP0474 -----; E=5e-54 swissprot:Q51423; Y964_PSEAE HYPOTHETICAL PROTEIN PA0964 -----; E=2e-53 swissprot:O67517; YF75_AQUAE HYPOTHETICAL PROTEIN AQ_1575 -----; E=5e-53 COG: TP0474; COG0217 Uncharacterized ACR; E=4e-55 PFAM: PF01709; Domain of unknown function DUF28; E=8e-105; hypothetical protein complement(2845019..2845759) Rhodopirellula baltica SH 1 1794879 NP_866735.1 CDS RB5501 NC_005027.1 2845843 2847141 R hypothetical protein complement(2845843..2847141) Rhodopirellula baltica SH 1 1795460 NP_866736.1 CDS RB5502 NC_005027.1 2845859 2846293 D hypothetical protein 2845859..2846293 Rhodopirellula baltica SH 1 1792818 NP_866737.1 CDS rbfA NC_005027.1 2847155 2847568 R PMID: 7535280 PMID: 9422595 best DB hits: BLAST: ddbj:BAB06130.1; (AP001515) ribosome-binding factor A [Bacillus; E=4e-13 swissprot:P32731; RBFA_BACSU RIBOSOME-BINDING FACTOR A (P15B; E=2e-11 swissprot:Q55625; RBFA_SYNY3 RIBOSOME-BINDING FACTOR A -----; E=2e-09 COG: BH2411; COG0858 Ribosome-binding factor A; E=4e-14 PFAM: PF02033; Ribosome-binding factor A; E=1.7e-28; ribosome-binding factor A complement(2847155..2847568) Rhodopirellula baltica SH 1 1790096 NP_866738.1 CDS infB NC_005027.1 2847721 2850837 R Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 complement(2847721..2850837) Rhodopirellula baltica SH 1 1792889 NP_866739.1 CDS RB5505 NC_005027.1 2850866 2851087 D hypothetical protein 2850866..2851087 Rhodopirellula baltica SH 1 1794043 NP_866740.1 CDS RB5506 NC_005027.1 2850947 2851102 R hypothetical protein complement(2850947..2851102) Rhodopirellula baltica SH 1 1792016 NP_866741.1 CDS nusA NC_005027.1 2851099 2852595 R modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA complement(2851099..2852595) Rhodopirellula baltica SH 1 1791819 NP_866742.1 CDS RB5508 NC_005027.1 2852546 2852710 R hypothetical protein complement(2852546..2852710) Rhodopirellula baltica SH 1 1795606 NP_866743.1 CDS RB5509 NC_005027.1 2852723 2854117 R hypothetical protein complement(2852723..2854117) Rhodopirellula baltica SH 1 1790761 NP_866744.1 CDS RB5511 NC_005027.1 2854114 2855727 R best DB hits: BLAST: ddbj:BAA77335.1; (AB019494) IDN3 [Homo sapiens]; E=0.21 ddbj:BAA77349.1; (AB019602) IDN3-B [Homo sapiens]; E=0.21; hypothetical protein complement(2854114..2855727) Rhodopirellula baltica SH 1 1794716 NP_866745.1 CDS gspK NC_005027.1 2855743 2857647 R PMID: 8407845 best DB hits: BLAST: gb:AAC70108.1; (AF074613) type II secretion protein [Escherichia; E=2e-06 swissprot:P34026; GSPK_XANCP GENERAL SECRETION PATHWAY PROTEIN K; E=5e-04 swissprot:P31706; GSPK_ERWCA GENERAL SECRETION PATHWAY PROTEIN K; E=0.002 COG: XF1523; COG3156 General secretion pathway protein K; E=2e-04; general secretion pathway protein K complement(2855743..2857647) Rhodopirellula baltica SH 1 1791842 NP_866746.1 CDS RB5514 NC_005027.1 2857532 2858641 R hypothetical protein complement(2857532..2858641) Rhodopirellula baltica SH 1 1792009 NP_866747.1 CDS RB5515 NC_005027.1 2858616 2859134 R PMID: 12024217; signal peptide complement(2858616..2859134) Rhodopirellula baltica SH 1 1794094 NP_866748.1 CDS RB5516 NC_005027.1 2859131 2859862 R best DB hits: PFAM: PF02501; Bacterial type II secretion system p; E=0.08; signal peptide complement(2859131..2859862) Rhodopirellula baltica SH 1 1793511 NP_866749.1 CDS gspG NC_005027.1 2859868 2860344 R PMID: 1640836 PMID: 8407845 best DB hits: BLAST: pir:B70338; general secretion pathway protein G - Aquifex aeolicus; E=0.065 swissprot:P31733; GSPG_AERHY GENERAL SECRETION PATHWAY PROTEIN G; E=0.29 pir:B82670; general secretory pathway protein G precursor XF1519; E=0.83 COG: aq_418; COG2165 General secretory pathway proteins G and H and; E=0.006; general secretion pathway protein G complement(2859868..2860344) Rhodopirellula baltica SH 1 1791942 NP_866750.1 CDS RB5522 NC_005027.1 2860331 2860696 R hypothetical protein complement(2860331..2860696) Rhodopirellula baltica SH 1 1791218 NP_866751.1 CDS RB5523 NC_005027.1 2860709 2860984 R hypothetical protein complement(2860709..2860984) Rhodopirellula baltica SH 1 1793702 NP_866752.1 CDS RB5524 NC_005027.1 2860924 2882595 D PMID: 11759840 best DB hits: BLAST: embl:CAC19834.1; (AJ401093) hypothetical protein [Actinomyces; E=0.17; hypothetical protein 2860924..2882595 Rhodopirellula baltica SH 1 1793510 NP_866753.1 CDS RB5540 NC_005027.1 2882665 2883432 D PMID: 8760912 best DB hits: BLAST: swissprot:P42981; YPJG_BACSU HYPOTHETICAL 24.8 KD PROTEIN IN; E=9e-17 ddbj:BAB05401.1; (AP001512) BH1682~unknown conserved protein; E=2e-15 gb:AAC14880.1; (AF060080) hypothetical protein [Chlorobium; E=6e-15 COG: BS_ypjG; COG2120 Uncharacterized proteins, LmbE homologs; E=9e-18 PFAM: PF02585; Uncharacterized LmbE-like protein, C; E=2.5e-20; hypothetical protein 2882665..2883432 Rhodopirellula baltica SH 1 1792850 NP_866754.1 CDS RB5542 NC_005027.1 2883410 2883577 R hypothetical protein complement(2883410..2883577) Rhodopirellula baltica SH 1 1789907 NP_866755.1 CDS metG NC_005027.1 2883586 2885625 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 2883586..2885625 Rhodopirellula baltica SH 1 1790997 NP_866756.1 CDS RB5544 NC_005027.1 2885702 2886013 R hypothetical protein complement(2885702..2886013) Rhodopirellula baltica SH 1 1791971 NP_866757.1 CDS RB5545 NC_005027.1 2885758 2886006 R hypothetical protein complement(2885758..2886006) Rhodopirellula baltica SH 1 1790898 NP_866758.1 CDS RB5546 NC_005027.1 2885978 2887570 D hypothetical protein 2885978..2887570 Rhodopirellula baltica SH 1 1795746 NP_866759.1 CDS RB5547 NC_005027.1 2887576 2888748 R hypothetical protein complement(2887576..2888748) Rhodopirellula baltica SH 1 1790028 NP_866760.1 CDS RB5548 NC_005027.1 2887747 2888790 D hypothetical protein 2887747..2888790 Rhodopirellula baltica SH 1 1790701 NP_866761.1 CDS RB5549 NC_005027.1 2888747 2889034 D hypothetical protein 2888747..2889034 Rhodopirellula baltica SH 1 1796603 NP_866762.1 CDS RB5550 NC_005027.1 2888787 2889104 D hypothetical protein 2888787..2889104 Rhodopirellula baltica SH 1 1796494 NP_866763.1 CDS RB5551 NC_005027.1 2889101 2891092 D hypothetical protein 2889101..2891092 Rhodopirellula baltica SH 1 1792940 NP_866764.1 CDS RB5554 NC_005027.1 2891141 2891305 D hypothetical protein 2891141..2891305 Rhodopirellula baltica SH 1 1792838 NP_866765.1 CDS RB5555 NC_005027.1 2891274 2891438 D hypothetical protein 2891274..2891438 Rhodopirellula baltica SH 1 1793355 NP_866766.1 CDS RB5557 NC_005027.1 2891491 2892735 D PMID: 2549854 best DB hits: BLAST: pir:H69064; serinethreonine protein kinase related protein -; E=0.002 pir:T29127; hypothetical protein SC1F2.18 - Streptomyces coelicolor; E=0.015 gb:AAG57622.1; AE005480_9 (AE005480) dehydrogenase; E=0.63 COG: MTH1485; COG1520 Uncharacterized proteins of WD40-like repeat family; E=2e-04 PFAM: PF01011; PQQ enzyme repeat; E=0.49; dehydrogenase 2891491..2892735 Rhodopirellula baltica SH 1 1794907 NP_866767.1 CDS RB5559 NC_005027.1 2892853 2893341 D signal peptide 2892853..2893341 Rhodopirellula baltica SH 1 1796008 NP_866768.1 CDS trpA NC_005027.1 2893360 2894241 D PMID: 4863752 PMID: 7038627 best DB hits: BLAST: swissprot:P77960; TRPA_SYNY3 TRYPTOPHAN SYNTHASE ALPHA CHAIN; E=1e-45 swissprot:P11081; TRPA_PSEPU TRYPTOPHAN SYNTHASE ALPHA CHAIN; E=6e-43 swissprot:P07344; TRPA_PSEAE TRYPTOPHAN SYNTHASE ALPHA CHAIN; E=4e-42 COG: slr0966; COG0159 Tryptophan synthase alpha chain; E=1e-46 PFAM: PF00290; Tryptophan synthase alpha chain; E=3.2e-73; tryptophan synthase subunit alpha 2893360..2894241 Rhodopirellula baltica SH 1 1795027 NP_866769.1 CDS RB5561 NC_005027.1 2894212 2894349 R hypothetical protein complement(2894212..2894349) Rhodopirellula baltica SH 1 1796754 NP_866770.1 CDS RB5562 NC_005027.1 2894328 2895203 R best DB hits: BLAST: gb:AAG37030.1; (AF288409) transcription elongation regulator; E=0.076 gb:AAK00309.1; AF315819_1 (AF315819) DNA-dependent RNA polymerase II; E=0.25 embl:CAA73326.1; (Y12790) Supt5h protein [Homo sapiens] -----; E=0.26; hypothetical protein complement(2894328..2895203) Rhodopirellula baltica SH 1 1793921 NP_866771.1 CDS ftsH NC_005027.1 2895383 2897569 R PMID: 8444796 best DB hits: BLAST: swissprot:P73437; FTH3_SYNY3 CELL DIVISION PROTEIN FTSH HOMOLOG 3; E=1e-129 pir:T31466; cell-division protein homolog ftsH - Heliobacillus; E=1e-127 pir:F83053; cell division protein FtsH PA4751 [imported] -; E=1e-123 COG: sll1463; COG0465 ATP-dependent Zn proteases; E=1e-130 PFAM: PF00158; Sigma-54 interaction domain; E=0.092 PF01057; Parvovirus non-structural pro; E=0.014 PF00910; RNA helicase; E=0.31; cell division protein FtsH complement(2895383..2897569) Rhodopirellula baltica SH 1 1797043 NP_866772.1 CDS RB5567 NC_005027.1 2897566 2897766 R hypothetical protein complement(2897566..2897766) Rhodopirellula baltica SH 1 1796377 NP_866773.1 CDS dxr NC_005027.1 2897715 2899184 D catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2897715..2899184 Rhodopirellula baltica SH 1 1794572 NP_866774.1 CDS RB5571 NC_005027.1 2899223 2901454 D best DB hits: BLAST: pir:H81228; conserved hypothetical protein NMB0183 [imported] -; E=9e-16 pir:C82000; probable integral membrane protein NMA0084 [imported] -; E=1e-15 pir:C69881; conserved hypothetical protein yluC - Bacillus subtilis; E=7e-15 COG: NMB0183; COG0750 Predicted membrane-associated Zn-dependent; E=9e-17 HI0918; COG0750 Predicted membrane-associated Zn-dependent proteases; E=2e-15 yaeL; COG0750 Predicted membrane-associated Zn-dependent proteases 1; E=3e-13 PFAM: PF02163; Sterol-regulatory element bindi; E=0.03 PF00595; PDZ domain (Also known as DHR o; E=0.0064; metalloproteinase 2899223..2901454 Rhodopirellula baltica SH 1 1792787 NP_866775.1 CDS RB5572 NC_005027.1 2901499 2901618 R hypothetical protein complement(2901499..2901618) Rhodopirellula baltica SH 1 1792280 NP_866776.1 CDS RB5573 NC_005027.1 2901640 2902539 D best DB hits: BLAST: pir:E82830; conserved hypothetical protein XF0250 [imported] -; E=9e-18 gb:AAK02545.1; (AE006082) unknown [Pasteurella multocida]; E=2e-07 pir:B83243; hypothetical protein PA3222 [imported] - Pseudomonas; E=7e-04 COG: XF0250; COG0697 Predicted permeases; E=8e-19 PFAM: PF00892; Integral membrane protein DUF6; E=0.00013; permease 2901640..2902539 Rhodopirellula baltica SH 1 1790624 NP_866777.1 CDS RB5575 NC_005027.1 2902618 2903553 D best DB hits: BLAST: swissprot:Q50658; YN07_MYCTU HYPOTHETICAL 29.7 KDA PROTEIN RV2307C; E=0.002 COG: Rv2307c; COG1073 Hydrolases of the alpha/beta superfamily; E=2e-04; hydrolase 2902618..2903553 Rhodopirellula baltica SH 1 1794727 NP_866778.1 CDS gnl NC_005027.1 2903665 2904753 R PMID: 1482681 best DB hits: BLAST: embl:CAB59581.1; (AL132662) possible gluconolactonase precursor; E=2e-30 swissprot:Q01578; GNL_ZYMMO GLUCONOLACTONASE PRECURSOR; E=2e-19 pir:B82698; gluconolactonase precursor XF1297 [imported] - Xylella; E=3e-19 COG: XF1297; COG3386 Uncharacterized protein; E=3e-20; gluconolactonase complement(2903665..2904753) Rhodopirellula baltica SH 1 1795647 NP_866779.1 CDS RB5581 NC_005027.1 2904780 2905973 R best DB hits: BLAST: pir:A82381; conserved hypothetical protein VCA1077 [imported] -; E=8e-05 gb:AAD38234.1; (U17224) CarF [Pectobacterium carotovorum]; E=0.002 pir:H81703; conserved hypothetical protein TC0422 [imported] -; E=0.016 COG: VCA1077_2; COG1262 Uncharacterized BCR; E=8e-06; hypothetical protein complement(2904780..2905973) Rhodopirellula baltica SH 1 1795726 NP_866780.1 CDS RB5584 NC_005027.1 2906089 2906592 D signal peptide 2906089..2906592 Rhodopirellula baltica SH 1 1795570 NP_866781.1 CDS RB5585 NC_005027.1 2906633 2907235 R PMID: 12024217 best DB hits: BLAST: embl:CAB83107.1; (AJ276657) sigma factor 3 [Sinapis alba]; E=0.13 pir:B72234; RNA polymerase sigma-E factor - Thermotoga maritima; E=0.17 pir:S30404; hypothetical protein 3 - Streptomyces clavuligerus; E=0.21 PFAM: PF01046; NodD transcription activator c; E=0.2 PF00140; Sigma-70 factor; E=0.00055 PF00196; Bacterial regulatory proteins,; E=0.043; RNA polymerase sigma-E factor complement(2906633..2907235) Rhodopirellula baltica SH 1 1791883 NP_866782.1 CDS RB5587 NC_005027.1 2907345 2908004 R signal peptide complement(2907345..2908004) Rhodopirellula baltica SH 1 1790974 NP_866783.1 CDS RB5590 NC_005027.1 2908531 2909037 R signal peptide complement(2908531..2909037) Rhodopirellula baltica SH 1 1792330 NP_866784.1 CDS RB5593 NC_005027.1 2909182 2913054 R PMID: 7768349 best DB hits: BLAST: gb:AAF73695.1; (AE002226) serinethreonine-protein kinase; E=7e-39 pir:G71532; probable threoninetyrosine-specific protein kinase (EC; E=3e-38 pir:C72120; st protein kinase - Chlamydophila pneumoniae (strain; E=4e-37 COG: CT301_1; COG0515 Serine/threonine protein kinases; E=3e-39 PFAM: PF00069; Protein kinase domain; E=2.2e-27 PF00515; TPR Domain; E=0.89 PF02018; Cellulose binding domain; E=0.037; serine/threonine-protein kinase complement(2909182..2913054) Rhodopirellula baltica SH 1 1793930 NP_866785.1 CDS RB5595 NC_005027.1 2913027 2913269 D hypothetical protein 2913027..2913269 Rhodopirellula baltica SH 1 1790730 NP_866786.1 CDS RB5597 NC_005027.1 2913295 2913807 D signal peptide 2913295..2913807 Rhodopirellula baltica SH 1 1795264 NP_866787.1 CDS hisI NC_005027.1 2913833 2914309 D PMID: 3062174 best DB hits: BLAST: swissprot:O30723; HIS2_RHOCA PHOSPHORIBOSYL-ATP PYROPHOSPHATASE; E=2e-10 swissprot:P26722; HIS2_AZOBR PHOSPHORIBOSYL-ATP PYROPHOSPHATASE; E=6e-08 pir:D81178; phosphoribosyl-ATP cyclohydrolase NMB0603 [imported] -; E=8e-08 COG: NMB0603; COG0140 Phosphoribosyl-ATP pyrophosphohydrolase; E=8e-09 PFAM: PF01503; Phosphoribosyl-ATP pyrophosphohydrol; E=9.2e-30; phosphoribosyl-ATP pyrophosphatase 2913833..2914309 Rhodopirellula baltica SH 1 1796169 NP_866788.1 CDS hisG NC_005027.1 2914405 2915304 D PMID: 3062174 best DB hits: BLAST: swissprot:Q99145; HIS1_YARLI ATP PHOSPHORIBOSYLTRANSFERASE -----; E=2e-43 swissprot:P46586; HIS1_CANAL ATP PHOSPHORIBOSYLTRANSFERASE -----; E=6e-42 swissprot:O33256; HIS1_MYCTU ATP PHOSPHORIBOSYLTRANSFERASE -----; E=4e-41 COG: Rv2121c; COG0040 ATP phosphoribosyltransferase (histidine; E=4e-42 hisG; COG0040 ATP phosphoribosyltransferase (histidine biosynthesis); E=2e-36 VC1132; COG0040 ATP phosphoribosyltransferase (histidine; E=3e-34 PFAM: PF01634; ATP phosphoribosyltransferase; E=2e-56; ATP phosphoribosyltransferase 2914405..2915304 Rhodopirellula baltica SH 1 1794172 NP_866789.1 CDS RB5604 NC_005027.1 2915323 2915454 D hypothetical protein 2915323..2915454 Rhodopirellula baltica SH 1 1794812 NP_866790.1 CDS RB5605 NC_005027.1 2915422 2915625 R hypothetical protein complement(2915422..2915625) Rhodopirellula baltica SH 1 1795212 NP_866791.1 CDS uvrA NC_005027.1 2915852 2918947 R PMID: 3007478 best DB hits: BLAST: swissprot:O26543; UVRA_METTH EXCINUCLEASE ABC SUBUNIT A -----; E=1e-178 ddbj:BAB07313.1; (AP001519) excinuclease ABC (subunit A) [Bacillus; E=1e-173 swissprot:Q9Z507; UVRA_STRCO EXCINUCLEASE ABC SUBUNIT A -----; E=1e-168 COG: MTH443; COG0178 Excinuclease ATPase subunit; E=1e-179 PFAM: PF00005; ABC transporter; E=0.0014 PF01583; Adenylylsulfate kinase; E=0.037 PF00485; Phosphoribulokinase / Uridine; E=0.54; excinuclease ABC subunit A complement(2915852..2918947) Rhodopirellula baltica SH 1 1794721 NP_866792.1 CDS RB5608 NC_005027.1 2918941 2920320 D best DB hits: BLAST: embl:CAB45032.1; (AL078635) large multi-functional; E=4e-32 embl:CAB58265.1; (AL121849) multi-domain protein; E=6e-30 pir:T36423; probable large, multifunctional secreted protein -; E=9e-05; large multi-functional protein 2918941..2920320 Rhodopirellula baltica SH 1 1794616 NP_866793.1 CDS RB5611 NC_005027.1 2920380 2920733 D hypothetical protein 2920380..2920733 Rhodopirellula baltica SH 1 1791043 NP_866794.1 CDS RB5612 NC_005027.1 2920721 2921521 D signal peptide 2920721..2921521 Rhodopirellula baltica SH 1 1791444 NP_866795.1 CDS RB5613 NC_005027.1 2921546 2922628 D best DB hits: BLAST: pir:B75319; conserved hypothetical protein - Deinococcus radiodurans; E=5e-47 gb:AAG55401.1; AE005281_4 (AE005281) orf, hypothetical protein; E=8e-17 swissprot:P75843; YCAQ_ECOLI HYPOTHETICAL 47.7 KDA PROTEIN IN; E=3e-16 COG: DR2072; COG3214 Uncharacterized BCR; E=5e-48; hypothetical protein 2921546..2922628 Rhodopirellula baltica SH 1 1791637 NP_866796.1 CDS RB5614 NC_005027.1 2922659 2923114 D hypothetical protein 2922659..2923114 Rhodopirellula baltica SH 1 1794304 NP_866797.1 CDS RB5615 NC_005027.1 2923193 2924320 R best DB hits: BLAST: pir:B75154; hypothetical protein PAB2408 - Pyrococcus abyssi (strain; E=0.21 PFAM: PF00515; TPR Domain; E=0.15; hypothetical protein complement(2923193..2924320) Rhodopirellula baltica SH 1 1791968 NP_866798.1 CDS RB5616 NC_005027.1 2924378 2926477 R best DB hits: BLAST: pir:B69988; hypothetical protein ytaP - Bacillus subtilis -----; E=3e-15 ddbj:BAA81869.1; (AB026295) ESTs C19441(E10423),C99201(E10423); E=2e-08 pir:G82643; conserved hypothetical protein XF1745 [imported] -; E=0.12 PFAM: PF00969; Class II histocompatibility ant; E=0.17; hypothetical protein complement(2924378..2926477) Rhodopirellula baltica SH 1 1796203 NP_866799.1 CDS RB5618 NC_005027.1 2926646 2927152 R best DB hits: BLAST: pir:D83595; hypothetical protein PA0398 [imported] - Pseudomonas; E=2e-40 gb:AAG45137.1; AF310895_3 (AF310895) unknown [Dictyostelium; E=5e-06 gb:AAF48683.1; (AE003504) CG9089 gene product [Drosophila; E=2e-05 COG: PA0398; COG2314 Predicted membrane protein; E=2e-41; hypothetical protein complement(2926646..2927152) Rhodopirellula baltica SH 1 1791551 NP_866800.1 CDS RB5619 NC_005027.1 2927404 2928822 R best DB hits: BLAST: swissprot:P74120; ENGA_SYNY3 PROBABLE GTP-BINDING PROTEIN ENGA; E=7e-72 ddbj:BAA88823.1; (AB016077) phosphoglycerate dehydrogenase; E=1e-69 swissprot:P50743; ENGA_BACSU PROBABLE GTP-BINDING PROTEIN ENGA; E=6e-68 COG: slr1974; COG1160 Predicted GTPases; E=7e-73 PFAM: PF02263; Guanylate-binding protein, N-termina; E=0.84 PF01926; GTPase of unknown function; E=8.1e-11 PF02421; Ferrous iron transport protein B; E=1.4e-05; GTP-binding protein complement(2927404..2928822) Rhodopirellula baltica SH 1 1795747 NP_866801.1 CDS RB5620 NC_005027.1 2928859 2929824 D PMID: 1324872 best DB hits: BLAST: pir:E70446; N-terminus of phage SPO1 DNA polymerase - Aquifex; E=2e-28 pir:C71351; probable DNA polymerase, bacteriophage-type - syphilis; E=6e-26 pir:D75359; DNA polymerase-related protein - Deinococcus radiodurans; E=4e-24 COG: aq_1693; COG1573 Uracil-DNA glycosylase; E=2e-29; DNA polymerase 2928859..2929824 Rhodopirellula baltica SH 1 1792113 NP_866802.1 CDS RB5622 NC_005027.1 2930011 2930538 R hypothetical protein complement(2930011..2930538) Rhodopirellula baltica SH 1 1796320 NP_866803.1 CDS RB5625 NC_005027.1 2930972 2931154 R hypothetical protein complement(2930972..2931154) Rhodopirellula baltica SH 1 1796071 NP_866804.1 CDS pepN NC_005027.1 2931090 2933726 D PMID: 1765107 best DB hits: BLAST: embl:CAC16707.1; (AL450289) metallopeptidase; E=2e-08 gb:AAB68919.1; (U00062) Aap1'p: argininealanine aminopeptidase; E=8e-05 swissprot:P32454; APE2_YEAST AMINOPEPTIDASE II (YSCII) -----; E=1e-04 COG: YHR047c; COG0308 Aminopeptidase N; E=8e-06; aminopeptidase 2931090..2933726 Rhodopirellula baltica SH 1 1794337 NP_866805.1 CDS RB5629 NC_005027.1 2933723 2934316 D hypothetical protein 2933723..2934316 Rhodopirellula baltica SH 1 1794145 NP_866806.1 CDS parA NC_005027.1 2934370 2935218 R PMID: 9054507 best DB hits: BLAST: gb:AAF16005.1; AF187159_5 (AF187159) ParA [Streptomyces coelicolor; E=8e-52 pir:F70851; probable parB protein - Mycobacterium tuberculosis; E=9e-52 gb:AAC03484.1; (AF031590) Soj-like [Streptomyces coelicolor; E=2e-51 COG: Rv3918c; COG1192 ATPases involved in chromosome partitioning; E=9e-53 PFAM: PF00142; 4Fe-4S iron sulfur cluster bi; E=0.00074 PF02374; Anion-transporting ATPase; E=0.0047 PF01227; GTP cyclohydrolase I; E=0.52; partitioning or sporulation protein ParA complement(2934370..2935218) Rhodopirellula baltica SH 1 1794470 NP_866807.1 CDS RB5631 NC_005027.1 2935243 2935548 D hypothetical protein 2935243..2935548 Rhodopirellula baltica SH 1 1796743 NP_866808.1 CDS RB5634 NC_005027.1 2935709 2935858 D hypothetical protein 2935709..2935858 Rhodopirellula baltica SH 1 1794484 NP_866809.1 CDS RB5635 NC_005027.1 2935874 2936059 R best DB hits: PFAM: PF01587; Monocarboxylate transporter; E=0.39; hypothetical protein complement(2935874..2936059) Rhodopirellula baltica SH 1 1790241 NP_866810.1 CDS RB5637 NC_005027.1 2936058 2936810 D best DB hits: BLAST: pir:A83457; conserved hypothetical protein PA1501 [imported] -; E=1e-11 gb:AAG59852.1; AF284750_1 (AF284750) HT036-ISO [Homo sapiens]; E=9e-10 swissprot:P36951; TRLC_DROME TRANSIENT RECEPTOR POTENTIAL LOCUS C; E=2e-09 COG: PA1501; COG1082 Predicted endonucleases; E=1e-12; sugar phosphate isomerase/epimerase 2936058..2936810 Rhodopirellula baltica SH 1 1795751 NP_866811.1 CDS RB5638 NC_005027.1 2936814 2939162 D PMID: 11337471 best DB hits: BLAST: gb:AAK05748.1; AE006395_8 (AE006395) UNKNOWN PROTEIN [Lactococcus; E=0.018 pir:G81786; Neisseria-specific antigen protein, TspA NMA2146; E=0.38 gb:AAF57761.1; (AE003801) CG5765 gene product [Drosophila; E=0.51 PFAM: PF00249; Myb-like DNA-binding domain; E=0.16; hypothetical protein 2936814..2939162 Rhodopirellula baltica SH 1 1795202 NP_866812.1 CDS RB5641 NC_005027.1 2939202 2940830 D best DB hits: BLAST: pir:H81355; probable integral membrane protein Cj0832c [imported] -; E=2e-58 pir:D75220; hypothetical protein PAB2161 - Pyrococcus abyssi (strain; E=3e-54 pir:D71202; hypothetical protein PH1889 - Pyrococcus horikoshii; E=4e-52 COG: Cj0832c; COG1757 Na+/H+ antiporter; E=2e-59; integral membrane protein- Na+H+ antiporter 2939202..2940830 Rhodopirellula baltica SH 1 1791280 NP_866813.1 CDS fliG NC_005027.1 2940969 2942018 D PMID: 10440379 best DB hits: BLAST: swissprot:Q9WY63; FLIG_THEMA FLAGELLAR MOTOR SWITCH PROTEIN FLIG; E=3e-60 pir:G71328; probable flagellar motor switch protein (fliG-2) -; E=2e-57 swissprot:P23448; FLIG_BACSU FLAGELLAR MOTOR SWITCH PROTEIN FLIG; E=5e-57 COG: TM0220; COG1536 Flagellar motor switch protein; E=3e-61 PFAM: PF01706; FliG C-terminal domain; E=7.8e-45; flagellar motor switch protein fliG 2940969..2942018 Rhodopirellula baltica SH 1 1797013 NP_866814.1 CDS RB5643 NC_005027.1 2942015 2942314 R hypothetical protein complement(2942015..2942314) Rhodopirellula baltica SH 1 1790558 NP_866815.1 CDS RB5644 NC_005027.1 2942366 2943130 R PMID: 8843436 best DB hits: BLAST: pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=6e-04 embl:CAB94634.1; (AL359215) secreted glycosyl hydrolase.; E=7e-04 embl:CAB45032.1; (AL078635) large multi-functional; E=0.055; secreted glycosyl hydrolase complement(2942366..2943130) Rhodopirellula baltica SH 1 1792349 NP_866816.1 CDS RB5645 NC_005027.1 2943152 2944822 R PMID: 2180903 best DB hits: BLAST: embl:CAA73938.1; (Y13616) degP [Bradyrhizobium japonicum]; E=2e-23 gb:AAF87931.1; AF163841_10 (AF163841) serine protease; E=4e-22 swissprot:P54925; DEGP_BARHE PROBABLE PERIPLASMIC SERINE PROTEASE; E=7e-21 COG: slr1204; COG0265 Trypsin-like serine proteases, typically; E=1e-19 htrA; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=1e-18 BB0104; COG0265 Trypsin-like serine proteases, typically; E=2e-18 PFAM: PF00089; Trypsin; E=4.9e-10 PF00595; PDZ domain (Also known as DHR or GLG; E=0.0022; serine protease complement(2943152..2944822) Rhodopirellula baltica SH 1 1790657 NP_866817.1 CDS RB5647 NC_005027.1 2944831 2946567 R PMID: 8905231 best DB hits: BLAST: swissprot:P42349; YC42_SYNY3 HYPOTHETICAL METHYLTRANSFERASE; E=1e-58 swissprot:Q55914; Y309_SYNY3 HYPOTHETICAL METHYLTRANSFERASE; E=4e-27 pir:E72242; Mg-protoporphyrin IX monomethyl ester oxidative; E=3e-11 COG: sll1242; COG1032 Fe-S oxidoreductases family 2; E=9e-60 PFAM: PF00750; tRNA synthetases class I (R); E=0.67; methyltransferase complement(2944831..2946567) Rhodopirellula baltica SH 1 1791371 NP_866818.1 CDS RB5648 NC_005027.1 2946605 2947117 D hypothetical protein 2946605..2947117 Rhodopirellula baltica SH 1 1795275 NP_866819.1 CDS RB5649 NC_005027.1 2946695 2947318 R hypothetical protein complement(2946695..2947318) Rhodopirellula baltica SH 1 1794462 NP_866820.1 CDS RB5652 NC_005027.1 2947071 2947226 R hypothetical protein complement(2947071..2947226) Rhodopirellula baltica SH 1 1791254 NP_866821.1 CDS gltD NC_005027.1 2947365 2948867 R PMID: 2643092 PMID: 3326786 best DB hits: BLAST: ddbj:BAA12742.1; (D85230) small subunit of NADH-dependent; E=1e-163 pir:T49818; probable glutamate synthase (NADPH) [imported] -; E=1e-162 pir:S74625; NADH-glutamate synthase small chain gltD - Synechocystis; E=1e-161 COG: sll1027; COG0493 NADPH-dependent glutamate synthase beta chain and; E=1e-162 PFAM: PF01494; FAD binding domain; E=0.013 PF02254; KTN NAD-binding domain; E=0.036 PF00984; UDP-glucose/GDP-mannose dehydr; E=0.28; NADH-glutamate synthase small chain complement(2947365..2948867) Rhodopirellula baltica SH 1 1795454 NP_866822.1 CDS gltB NC_005027.1 2949010 2953575 R PMID: 2643092 PMID: 3326786 best DB hits: BLAST: swissprot:Q06434; GLSF_ANTSP FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE; E=0.0 swissprot:P23225; GLSF_MAIZE FERREDOXIN-DEPENDENT GLUTAMATE; E=0.0 swissprot:Q03460; GLSN_MEDSA GLUTAMATE SYNTHASE [NADH], CHLOROPLAST; E=0.0 COG: sll1502_2; COG0069 Glutamate synthetase domain 2; E=0.0 sll1502_1; COG0067 Glutamate synthetase domain 1; E=1e-118 PFAM: PF01645; Conserved region in glutamate; E=5.5e-235 PF01493; Domain of unknown function DU; E=4.2e-95; glutamate synthase [NADPH] large chain complement(2949010..2953575) Rhodopirellula baltica SH 1 1794810 NP_866823.1 CDS RB5655 NC_005027.1 2953644 2954621 R PMID: 3413113 best DB hits: BLAST: swissprot:Q9X725; OXYR_ERWCH HYDROGEN PEROXIDE-INDUCIBLE GENES; E=1e-25 swissprot:P71318; OXYR_ERWCA HYDROGEN PEROXIDE-INDUCIBLE GENES; E=1e-25 swissprot:P44418; OXYR_HAEIN HYDROGEN PEROXIDE-INDUCIBLE GENES; E=3e-25 COG: HI0571; COG0583 Transcriptional regulator; E=2e-26 PFAM: PF00126; Bacterial regulatory helix-turn-heli; E=9.6e-37; transcriptional regulator complement(2953644..2954621) Rhodopirellula baltica SH 1 1793755 NP_866824.1 CDS RB5657 NC_005027.1 2954894 2955289 R best DB hits: BLAST: gb:AAB81983.1; (AF025662) unknown [Vibrio cholerae]; E=7e-18 ddbj:BAB02723.1; (AB022216) gene_id:MGD8.2~unknown protein; E=1e-11 pir:T09703; pop3 protein - western balsam poplar x cottonwood; E=5e-08; hypothetical protein complement(2954894..2955289) Rhodopirellula baltica SH 1 1789957 NP_866825.1 CDS RB5660 NC_005027.1 2955464 2956750 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 2955464..2956750 Rhodopirellula baltica SH 1 1792086 NP_866826.1 CDS RB5663 NC_005027.1 2956834 2957940 R signal peptide complement(2956834..2957940) Rhodopirellula baltica SH 1 1792650 NP_866827.1 CDS RB5665 NC_005027.1 2958146 2959264 R best DB hits: BLAST: gb:AAD04331.1; (AF062404) calpain [Drosophila melanogaster]; E=0.001 gb:AAF50189.1; (AE003550) CalpB gene product [Drosophila; E=0.001; calpain complement(2958146..2959264) Rhodopirellula baltica SH 1 1795513 NP_866828.1 CDS moeB NC_005027.1 2959418 2959762 R PMID: 10622725 best DB hits: BLAST: pir:S76565; hypothetical protein - Synechocystis sp. (strain PCC; E=7e-14 pir:S76179; hypothetical protein - Synechocystis sp. (strain PCC; E=2e-12 ddbj:BAB06639.1; (AP001517) BH2920~unknown conserved protein; E=2e-12 COG: slr0192; COG0607 Rhodanese-related sulfurtransferases; E=7e-15 yceA; COG1054 Uncharacterized enzyme related to sulfurtransferases; E=4e-04 PFAM: PF00581; Rhodanese-like domain; E=4.2e-17; molybdopterin-synthase sulfurylase complement(2959418..2959762) Rhodopirellula baltica SH 1 1795533 NP_866829.1 CDS nadE NC_005027.1 2959877 2961988 R catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase complement(2959877..2961988) Rhodopirellula baltica SH 1 1791359 NP_866830.1 CDS RB5674 NC_005027.1 2962174 2962887 R PMID: 9130712 best DB hits: BLAST: pir:A72340; serinethreonine protein phosphatase - Thermotoga; E=3e-30 gb:AAB68789.1; (U97022) orf; similar to serinethreonine protein; E=4e-26 gb:AAC46052.1; (U80887) serinethreonine protein phosphatase 1; E=1e-20 COG: TM0742; COG0639 Diadenosine tetraphosphatase and related; E=2e-31 PFAM: PF00149; Ser/Thr protein phosphatase; E=0.15; serine/threonine protein phosphatase complement(2962174..2962887) Rhodopirellula baltica SH 1 1791981 NP_866831.1 CDS RB5675 NC_005027.1 2962888 2963667 R best DB hits: BLAST: embl:CAB72194.1; (AL138851) hypothetical protein SCE59.07c; E=3e-10 gb:AAG15555.1; (AY007523) AlgH [Pseudomonas fluorescens]; E=6e-06 pir:C83596; conserved hypothetical protein PA0405 [imported] -; E=6e-06 COG: PA0405; COG1678 transcriptional regulator; E=6e-07 PFAM: PF02622; Uncharacterized ACR, COG1678; E=4.1e-12; transcriptional regulator complement(2962888..2963667) Rhodopirellula baltica SH 1 1792320 NP_866832.1 CDS RB5676 NC_005027.1 2963664 2963807 R hypothetical protein complement(2963664..2963807) Rhodopirellula baltica SH 1 1790224 NP_866833.1 CDS fabH NC_005027.1 2963826 2964836 R PMID: 1551888 PMID: 10593943 best DB hits: BLAST: pir:C81029; 3-oxoacyl-(acyl-carrier-protein) synthase III NMB1916; E=7e-41 gb:AAK04869.1; AE006310_11 (AE006310); E=1e-39 pir:H82633; beta-ketoacyl-[ACP] synthase III XF1817 [imported] -; E=3e-39 COG: NMB1916; COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III; E=7e-42 PFAM: PF02797; Chalcone and stilbene synthas; E=0.31; 3-oxoacyl-ACP synthase complement(2963826..2964836) Rhodopirellula baltica SH 1 1792326 NP_866834.1 CDS tig NC_005027.1 2965080 2966843 D PMID: 2211496 best DB hits: BLAST: gb:AAG30851.1; AF296129_1 (AF296129) trigger factor [Aquifex; E=4e-23 swissprot:O67358; TIG_AQUAE TRIGGER FACTOR (TF) ----- pir:; E=8e-23 swissprot:O53189; TIG_MYCTU TRIGGER FACTOR (TF) ----- pir:; E=1e-20 COG: aq_1340; COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase; E=7e-24 tig; COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger; E=5e-20 BS_tig; COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase; E=8e-20; trigger factor 2965080..2966843 Rhodopirellula baltica SH 1 1795814 NP_866835.1 CDS RB5685 NC_005027.1 2966933 2967730 R PMID: 9389475 best DB hits: BLAST: gb:AAB89060.1; (AE000954) conserved hypothetical protein; E=7e-11 gb:AAD23399.1; AF110772_1 (AF110772) unknown [Streptomyces; E=1e-10 pir:G69054; conserved hypothetical protein MTH141 - Methanobacterium; E=1e-10 COG: AF2196; COG1891 Uncharacterized ArCR; E=7e-12; hypothetical protein complement(2966933..2967730) Rhodopirellula baltica SH 1 1794219 NP_866836.1 CDS rnd NC_005027.1 2967715 2969196 D PMID: 3041371 best DB hits: BLAST: gb:AAG56793.1; AE005403_4 (AE005403) RNase D, processes tRNA; E=2e-32 pir:A83483; ribonuclease D PA1294 [imported] - Pseudomonas; E=3e-32 swissprot:P09155; RND_ECOLI RIBONUCLEASE D (RNASE D) -----; E=7e-32 COG: PA1294; COG0349 Ribonuclease D; E=3e-33 aq_1967; COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase; E=3e-08 PFAM: PF01612; 3'-5' exonuclease; E=2e-31 PF00570; HRDC domain; E=0.00016; ribonuclease D 2967715..2969196 Rhodopirellula baltica SH 1 1794881 NP_866837.1 CDS RB5691 NC_005027.1 2969237 2970463 R best DB hits: BLAST: gb:AAF82144.1; AC034256_8 (AC034256) Contains similarity to F-box; E=3e-07 pir:T15864; hypothetical protein C56E6.6 - Caenorhabditis elegans; E=0.006 embl:CAB95333.1; (AL359782) possible adenylate cyclase; E=0.025; adenylate cyclase complement(2969237..2970463) Rhodopirellula baltica SH 1 1791215 NP_866838.1 CDS RB5693 NC_005027.1 2970400 2970624 R hypothetical protein complement(2970400..2970624) Rhodopirellula baltica SH 1 1791334 NP_866839.1 CDS bioD NC_005027.1 2970632 2971417 R PMID: 8250549 best DB hits: BLAST: swissprot:P36572; BIOD_SERMA DETHIOBIOTIN SYNTHETASE (DETHIOBIOTIN; E=8e-20 swissprot:P53558; BIOD_BACSU DETHIOBIOTIN SYNTHETASE (DETHIOBIOTIN; E=1e-19 gb:AAG55149.1; AE005258_13 (AE005258) dethiobiotin synthetase; E=1e-18 COG: BS_bioD; COG0132 Dethiobiotin synthetase; E=1e-20 PFAM: PF01656; Cobyrinic acid a,c-diamide synthase; E=0.077; dethiobiotin synthetase complement(2970632..2971417) Rhodopirellula baltica SH 1 1790199 NP_866840.1 CDS RB5695 NC_005027.1 2971401 2972267 D PMID: 8449931 best DB hits: BLAST: pir:H82556; beta-alanine synthetase XF2443 [imported] - Xylella; E=4e-78 pir:B81369; probable hydrolase Cj0947c [imported] - Campylobacter; E=2e-73 pir:F71901; hypothetical protein jhp0694 - Helicobacter pylori; E=2e-69 COG: XF2443; COG0388 Predicted amidohydrolase; E=4e-79 PFAM: PF00795; Carbon-nitrogen hydrolase; E=8.8e-98; beta-alanine synthetase 2971401..2972267 Rhodopirellula baltica SH 1 1794834 NP_866841.1 CDS suhB NC_005027.1 2972326 2973153 R PMID: 8002619 PMID: 10747806 best DB hits: BLAST: pir:F81092; extragenic suppressor protein SuhB NMB1347 [imported] -; E=3e-45 pir:B81848; inositol monophosphate family protein NMA1559 [imported]; E=1e-44 pir:C83169; extragenic suppressor protein SuhB PA3818 [imported] -; E=3e-42 COG: NMB1347; COG0483 Archaeal fructose-1,6-bisphosphatase and related; E=3e-46 PFAM: PF00459; Inositol monophosphatase; E=1.4e-70; inositol monophosphatase complement(2972326..2973153) Rhodopirellula baltica SH 1 1790714 NP_866842.1 CDS RB5697 NC_005027.1 2973214 2974596 D PMID: 8384715 best DB hits: BLAST: swissprot:P14312; FIXW_RHILE FIXW PROTEIN ----- pir: JQ0313; E=3e-11 pir:C70314; thiol-disulfide interchange protein tlpA [imported] -; E=5e-06 ddbj:BAB05296.1; (AP001512) cytochrome c biogenesis (thioredoxin); E=6e-05 COG: aq_152; COG0526 Thiol-disulfide isomerase and thioredoxins; E=5e-07 PFAM: PF00085; Thioredoxin; E=1.9e-05; thiol-disulfide interchange protein 2973214..2974596 Rhodopirellula baltica SH 1 1793465 NP_866843.1 CDS RB5699 NC_005027.1 2974605 2975243 D PMID: 11248100 best DB hits: BLAST: gb:AAK03963.1; (AE006225) unknown [Pasteurella multocida]; E=2e-13 pir:A82416; conserved hypothetical protein VCA0789 [imported] -; E=1e-12 swissprot:P39270; YJDF_ECOLI HYPOTHETICAL 23.4 KD PROTEIN IN; E=1e-07 PFAM: PF02177; Amyloid A4 extracellular domain; E=0.63; hypothetical protein 2974605..2975243 Rhodopirellula baltica SH 1 1791593 NP_866844.1 CDS RB5701 NC_005027.1 2975188 2978523 D PMID: 3286606 best DB hits: BLAST: gb:AAG20509.1; (AE005123) glycolate oxidase subunit; GlcD; E=2e-48 gb:AAG20148.1; (AE005092) glycerol-3-phosphate dehydrogenase chain; E=5e-40 gb:AAG56674.1; AE005391_11 (AE005391) oxidase; E=2e-38 COG: VNG2422G_1; COG0277 FAD/FMN-containing dehydrogenases; E=2e-49 VNG2422G_2; COG0247 Fe-S oxidoreductases; E=7e-42 ydiJ_1; COG0277 FAD/FMN-containing dehydrogenases; E=5e-39 PFAM: PF01565; FAD binding domain; E=6.7e-40 PF02913; FAD linked oxidases, C-terminal; E=2.6e-14; oxidase 2975188..2978523 Rhodopirellula baltica SH 1 1791289 NP_866845.1 CDS moaD NC_005027.1 2978520 2978780 D PMID: 8514782 PMID: 10053003 best DB hits: BLAST: pir:G70920; probable MoaD involved in molybdopterin synthesis -; E=2e-05 ddbj:BAB06737.1; (AP001517) molybdopterin converting factor; E=3e-05 gb:AAD14600.1; (AF091872) molybdopterin-synthase small subunit; E=1e-04 COG: Rv3112; COG1977 Molybdopterin converting factor, small subunit; E=3e-06; molybdopterin converting factor, small subunit 2978520..2978780 Rhodopirellula baltica SH 1 1790913 NP_866846.1 CDS moaE NC_005027.1 2978777 2979289 D PMID: 8361352 PMID: 8514782 best DB hits: BLAST: gb:AAF67478.1; AF155659_1 (AF155659) molybdenum cofactor; E=6e-15 embl:CAB71291.1; (AJ271728) molybdopterin synthase, large subunit; E=1e-14 pir:D70487; molybdopterin biosynthesis protein E chain [similarity]; E=1e-13 COG: aq_2181; COG0314 Molybdopterin converting factor, large subunit; E=1e-14 PFAM: PF02391; Molydopterin converting factor subun; E=7.2e-26; molybdopterin converting factor, large subunit 2978777..2979289 Rhodopirellula baltica SH 1 1796215 NP_866847.1 CDS RB5707 NC_005027.1 2979435 2979986 D hypothetical protein 2979435..2979986 Rhodopirellula baltica SH 1 1791104 NP_866848.1 CDS RB5708 NC_005027.1 2980028 2980579 R best DB hits: BLAST: ddbj:BAB07337.1; (AP001519) BH3618~unknown conserved protein in; E=5e-11 pir:C72419; conserved hypothetical protein - Thermotoga maritima; E=1e-08 pir:C71297; probable transmembrane protein - syphilis spirochete; E=5e-07 COG: BH3618; COG1699 Uncharacterized BCR; E=5e-12 PFAM: PF02623; Uncharacterized BCR, COG1699; E=5.7e-12; hypothetical protein complement(2980028..2980579) Rhodopirellula baltica SH 1 1795475 NP_866849.1 CDS flgL NC_005027.1 2980700 2982655 R PMID: 8158647 PMID: 2193164 best DB hits: BLAST: swissprot:P29744; FLGL_ECOLI FLAGELLAR HOOK-ASSOCIATED PROTEIN 3; E=4e-08 gb:AAG55829.1; AE005318_6 (AE005318) flagellar biosynthesis; E=1e-07 swissprot:P16326; FLGL_SALTY FLAGELLAR HOOK-ASSOCIATED PROTEIN 3; E=3e-07 COG: flgL; COG1344 Flagellin and related hook-associated proteins; E=4e-09 PFAM: PF00669; Bacterial flagellin N-terminus; E=0.028; flagellar hook-associated protein 3 complement(2980700..2982655) Rhodopirellula baltica SH 1 1794807 NP_866850.1 CDS RB5713 NC_005027.1 2982595 2982759 R hypothetical protein complement(2982595..2982759) Rhodopirellula baltica SH 1 1791163 NP_866851.1 CDS RB5715 NC_005027.1 2982826 2983458 D PMID: 8843436 best DB hits: BLAST: embl:CAB69748.1; (AL137166) hypothetical protein SCC121.30c; E=0.009; hypothetical protein 2982826..2983458 Rhodopirellula baltica SH 1 1790249 NP_866852.1 CDS RB5716 NC_005027.1 2983465 2983761 R best DB hits: BLAST: pir:T36788; hypothetical protein SCI30A.08 - Streptomyces; E=0.51 PFAM: PF02656; Domain of unknown function DUF; E=0.0074; hypothetical protein complement(2983465..2983761) Rhodopirellula baltica SH 1 1791158 NP_866853.1 CDS sthA NC_005027.1 2983764 2985257 R catalyzes the conversion of NADPH to NADH; soluble pyridine nucleotide transhydrogenase complement(2983764..2985257) Rhodopirellula baltica SH 1 1790897 NP_866854.1 CDS RB5720 NC_005027.1 2985336 2986280 D PMID: 7987228 best DB hits: BLAST: pir:C75051; hydrolase related PAB1449 - Pyrococcus abyssi (strain; E=5e-28 pir:C71109; hypothetical protein PH0642 - Pyrococcus horikoshii; E=7e-27 pir:B83387; hypothetical protein PA2074 [imported] - Pseudomonas; E=2e-22 COG: PAB1449; COG0388 Predicted amidohydrolase; E=5e-29 PFAM: PF00795; Carbon-nitrogen hydrolase; E=8e-48; amidohydrolase 2985336..2986280 Rhodopirellula baltica SH 1 1791966 NP_866855.1 CDS RB5722 NC_005027.1 2986310 2987221 R PMID: 9371463 best DB hits: BLAST: pir:H69043; conserved hypothetical protein MTH1330 -; E=0.19 swissprot:Q50500; YE63_METTH HYPOTHETICAL PROTEIN MTH1463 (ORF11); E=0.30 pir:A55712; hypothetical protein X mtd 5'-region - Methanobacterium; E=0.39; hypothetical protein complement(2986310..2987221) Rhodopirellula baltica SH 1 1794518 NP_866856.1 CDS RB5724 NC_005027.1 2987319 2987567 R hypothetical protein complement(2987319..2987567) Rhodopirellula baltica SH 1 1791199 NP_866857.1 CDS rph NC_005027.1 2987529 2988269 D PMID: 1624460 best DB hits: BLAST: swissprot:P28619; RNPH_BACSU RIBONUCLEASE PH (RNASE PH) (TRNA; E=2e-60 pir:A44914; tRNA nucleotidyltransferase (EC 2.7.7.56) - Bacillus; E=4e-60 pir:D82350; ribonuclease PH VC0210 [imported] - Vibrio cholerae; E=7e-60 COG: BS_rph; COG0689 RNase PH; E=2e-61 PA4740; COG1185 Polyribonucleotide nucleotidyltransferase; E=0.001 PFAM: PF01138; 3' exoribonuclease; E=4.3e-59; ribonuclease PH 2987529..2988269 Rhodopirellula baltica SH 1 1790661 NP_866858.1 CDS RB5727 NC_005027.1 2988285 2989502 D best DB hits: BLAST: gb:AAD41367.1; AF151698_4 (AF151698) oxidoreductase; E=9e-09 pir:H69216; 3-chlorobenzoate-3,4-dioxygenase dyhydrogenase related; E=1e-08 pir:T38428; hypothetical oxidoreductase - fission yeast; E=5e-08 COG: MTH875; COG0673 Predicted dehydrogenases and related proteins; E=9e-10 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=9.2e-22; oxidoreductase 2988285..2989502 Rhodopirellula baltica SH 1 1790272 NP_866859.1 CDS RB5730 NC_005027.1 2989469 2990419 D PMID: 8905231 best DB hits: BLAST: swissprot:P73846; YH17_SYNY3 HYPOTHETICAL 30.2 KD PROTEIN SLR1717; E=1e-37 gb:AAB89691.1; (AE000995) conserved hypothetical protein; E=3e-28 pir:C72312; conserved hypothetical protein - Thermotoga maritima; E=7e-28 COG: slr1717; COG1606 ATP-utilizing enzymes of the PP-loop superfamily; E=1e-38 PFAM: PF00764; Arginosuccinate synthase; E=0.042; ATP-utilizing enzyme 2989469..2990419 Rhodopirellula baltica SH 1 1793290 NP_866860.1 CDS RB5731 NC_005027.1 2990416 2992047 D PMID: 7768349 best DB hits: BLAST: pir:T36501; probable serinethreonine protein kinase - Streptomyces; E=3e-47 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=4e-46 swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=2e-45 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=4e-47 PFAM: PF00069; Protein kinase domain; E=2.8e-44; serine/threonine protein kinase 2990416..2992047 Rhodopirellula baltica SH 1 1792711 NP_866861.1 CDS RB5732 NC_005027.1 2992114 2992512 R hypothetical protein complement(2992114..2992512) Rhodopirellula baltica SH 1 1795636 NP_866862.1 CDS RB5733 NC_005027.1 2992454 2992648 R hypothetical protein complement(2992454..2992648) Rhodopirellula baltica SH 1 1796248 NP_866863.1 CDS RB5734 NC_005027.1 2992771 2993634 D PMID: 8905231 best DB hits: BLAST: pir:S75932; hypothetical protein - Synechocystis sp. (strain PCC; E=1e-35 pir:B83298; conserved hypothetical protein PA2771 [imported] -; E=7e-07 pir:S76731; hypothetical protein - Synechocystis sp. (strain PCC; E=9e-06 COG: sll0048_1; COG2203 GAF domain; E=2e-27 PFAM: PF01590; GAF domain; E=2.5e-09; hypothetical protein 2992771..2993634 Rhodopirellula baltica SH 1 1792114 NP_866864.1 CDS RB5736 NC_005027.1 2993690 2994466 R PMID: 1569007 best DB hits: BLAST: swissprot:P10940; UHPA_ECOLI transcriptional regulator; E=0.020 embl:CAB37412.1; (AJ224978) TtrR [Salmonella typhimurium] -----; E=0.075 swissprot:P27667; UHPA_SALTY transcriptional regulator; E=0.12 COG: uhpA; COG2197 Response regulators consisting of a CheY-like receiver; E=0.002; transcriptional regulator complement(2993690..2994466) Rhodopirellula baltica SH 1 1796190 NP_866865.1 CDS RB5737 NC_005027.1 2994415 2994777 D hypothetical protein 2994415..2994777 Rhodopirellula baltica SH 1 1795742 NP_866866.1 CDS ilvE NC_005027.1 2994894 2995667 R PMID: 3897211 best DB hits: BLAST: swissprot:Q58414; ILVE_METJA BRANCHED-CHAIN AMINO ACID; E=3e-07 gb:AAB90305.1; (AE001039) branched-chain amino acid; E=2e-05 pir:F69057; branched-chain amino-acid aminotransferase -; E=6e-05 COG: MJ1008; COG0115 Branched-chain amino acid; E=3e-08; branched-chain amino acid aminotransferase complement(2994894..2995667) Rhodopirellula baltica SH 1 1793021 NP_866867.1 CDS RB5740 NC_005027.1 2995817 2996944 R PMID: 11259647 best DB hits: PFAM: PF00487; Fatty acid desaturase; E=0.11; hypothetical protein complement(2995817..2996944) Rhodopirellula baltica SH 1 1790627 NP_866868.1 CDS RB5742 NC_005027.1 2997006 2997176 R hypothetical protein complement(2997006..2997176) Rhodopirellula baltica SH 1 1795353 NP_866869.1 CDS RB5743 NC_005027.1 2997165 2998460 D PMID: 9387221 best DB hits: BLAST: gb:AAC00390.1; (AF008220) YtfP [Bacillus subtilis]; E=2e-57 ddbj:BAB06998.1; (AP001518) BH3279~unknown conserved protein; E=5e-53 gb:AAK04356.1; AE006263_3 (AE006263) HYPOTHETICAL PROTEIN; E=3e-46 COG: BH3279; COG2081 Predicted flavoproteins; E=5e-54 PFAM: PF01134; Glucose inhibited division prot; E=0.38 PF01494; FAD binding domain; E=0.002 PF01946; Thi4 family; E=0.25; flavoprotein 2997165..2998460 Rhodopirellula baltica SH 1 1795519 NP_866870.1 CDS cya NC_005027.1 2998532 3000640 D PMID: 1970565 best DB hits: BLAST: swissprot:P40137; CYAA_STIAU ADENYLATE CYCLASE 1 (ATP; E=9e-11 swissprot:P19485; CYA1_RHIME ADENYLATE CYCLASE 1 (ATP; E=2e-10 pir:C71320; probable adenylate cyclase - syphilis spirochete -----; E=3e-10 COG: TP0485; COG2114 Adenylate cyclase, family 3 (some proteins contain; E=2e-11 PFAM: PF00498; FHA domain; E=0.61 PF00211; Adenylate and Guanylate cyclase; E=1.1e-07; adenylate cyclase 2998532..3000640 Rhodopirellula baltica SH 1 1795686 NP_866871.1 CDS RB5745 NC_005027.1 3000842 3001234 R hypothetical protein complement(3000842..3001234) Rhodopirellula baltica SH 1 1792076 NP_866872.1 CDS argS NC_005027.1 3001359 3003374 R PMID: 2668891 best DB hits: BLAST: pir:G82121; arginyl-tRNA synthetase VC2074 [imported] - Vibrio; E=1e-69 swissprot:Q55486; SYR_SYNY3 ARGINYL-TRNA SYNTHETASE; E=5e-68 embl:CAC01600.1; (AJ269505) arginyl-tRNA synthetase; E=4e-66 COG: VC2074; COG0018 Arginyl-tRNA synthetase; E=1e-70 PFAM: PF00750; tRNA synthetases class I (R); E=5.7e-55; arginyl-tRNA synthetase complement(3001359..3003374) Rhodopirellula baltica SH 1 1794533 NP_866873.1 CDS RB5749 NC_005027.1 3003437 3004000 R PMID: 10192928 best DB hits: BLAST: ddbj:BAB05047.1; (AP001511) BH1328~unknown conserved protein; E=1e-12 pir:S77145; ybeB protein homolog iojap - Synechocystis sp. (strain; E=2e-12 pir:E75256; conserved hypothetical protein - Deinococcus radiodurans; E=3e-11 COG: BH1328; COG0799 Uncharacterized ACR (homolog of plant Iojap; E=1e-13 CT769; COG0799 Uncharacterized ACR (homolog of plant Iojap proteins); E=1e-09 TM0147; COG0799 Uncharacterized ACR (homolog of plant Iojap; E=2e-09 PFAM: PF02410; Domain of unknown function DUF143; E=3.3e-30; hypothetical protein complement(3003437..3004000) Rhodopirellula baltica SH 1 1794795 NP_866874.1 CDS RB5753 NC_005027.1 3004163 3004645 D PMID: 9537378 best DB hits: BLAST: ddbj:BAB04667.1; (AP001510) bacterioferritin comigratory protein; E=2e-27 pir:F70870; probable bcp protein - Mycobacterium tuberculosis; E=2e-27 pir:A83520; bacterioferritin comigratory protein PA1008 [imported] -; E=8e-26 COG: BH0948; COG1225 Peroxiredoxins; E=2e-28 PFAM: PF00578; AhpC/TSA family; E=4.7e-35; bacterioferritin comigratory protein 3004163..3004645 Rhodopirellula baltica SH 1 1792917 NP_866875.1 CDS dnaK NC_005027.1 3004578 3006515 D best DB hits: BLAST: pir:F82206; DnaK-related protein VC1374 [imported] - Vibrio cholerae; E=1e-110 pir:E82206; DnaK-related protein VC1373 [imported] - Vibrio cholerae; E=2e-75 pir:C72385; dnaK-type molecular chaperone dnaK - Thermotoga maritima; E=4e-07 COG: VC1374; COG0443 Molecular chaperone; E=1e-111 PFAM: PF00370; FGGY family of carbohydrate kinases,; E=0.8 PF00012; Hsp70 protein; E=5.8e-06; molecular chaperone DnaK 3004578..3006515 Rhodopirellula baltica SH 1 1792945 NP_866876.1 CDS dnaK NC_005027.1 3006427 3009393 D PMID: 2345134 best DB hits: BLAST: pir:E82206; DnaK-related protein VC1373 [imported] - Vibrio cholerae; E=1e-142 pir:F82206; DnaK-related protein VC1374 [imported] - Vibrio cholerae; E=3e-88 swissprot:Q51382; HSCA_PSEAE CHAPERONE PROTEIN HSCA HOMOLOG; E=4e-08 COG: VC1373_1; COG0443 Molecular chaperone; E=1e-99 PFAM: PF00012; Hsp70 protein; E=0.0012; molecular chaperone DnaK 3006427..3009393 Rhodopirellula baltica SH 1 1791347 NP_866877.1 CDS RB5756 NC_005027.1 3009494 3013483 D hypothetical protein 3009494..3013483 Rhodopirellula baltica SH 1 1792788 NP_866878.1 CDS RB5758 NC_005027.1 3013477 3014379 R PMID: 9278503 best DB hits: BLAST: swissprot:Q46931; YGDQ_ECOLI HYPOTHETICAL 26.2 KD PROTEIN IN; E=2e-31 gb:AAF12561.1; AE001826_30 (AE001826) conserved hypothetical; E=5e-31 swissprot:P43932; YGDQ_HAEIN HYPOTHETICAL PROTEIN HI0056 -----; E=7e-30 COG: ygdQ; COG0861 Membrane protein TerC, possibly involved in tellurium; E=2e-32 DRB0131; COG0861 Membrane protein TerC, possibly involved in; E=5e-32; hypothetical protein complement(3013477..3014379) Rhodopirellula baltica SH 1 1796942 NP_866879.1 CDS RB5761 NC_005027.1 3014426 3015202 R best DB hits: PFAM: PF01925; Domain of unknown function DUF81; E=0.54; hypothetical protein complement(3014426..3015202) Rhodopirellula baltica SH 1 1794524 NP_866880.1 CDS RB5762 NC_005027.1 3015199 3015612 R PMID: 8760912 best DB hits: BLAST: swissprot:P42979; YPJD_BACSU HYPOTHETICAL 13.0 KD PROTEIN IN; E=8e-10 pir:H75445; conserved hypothetical protein - Deinococcus radiodurans; E=5e-09 ddbj:BAB05398.1; (AP001512) BH1679~unknown conserved protein; E=1e-08 COG: BS_ypjD; COG1694 Predicted pyrophosphatase; E=9e-11 PFAM: PF01503; Phosphoribosyl-ATP pyrophosphohydrol; E=0.23; pyrophosphatase complement(3015199..3015612) Rhodopirellula baltica SH 1 1790168 NP_866881.1 CDS RB5763 NC_005027.1 3015609 3016823 R PMID: 11481431 best DB hits: BLAST: embl:CAC18704.1; (AL451182) hypothetical protein [Streptomyces; E=0.12; signal peptide complement(3015609..3016823) Rhodopirellula baltica SH 1 1791548 NP_866882.1 CDS ndh NC_005027.1 3016868 3018265 R PMID: 6265208 best DB hits: BLAST: pir:S74826; NADH dehydrogenase (EC 1.6.99.3) - Synechocystis sp.; E=1e-110 embl:CAA71031.1; (Y09899) NADH dehydrogenase [Calothrix; E=1e-106 gb:AAC46302.1; (AF038423) NADH dehydrogenase [Mycobacterium; E=9e-91 COG: slr0851; COG1252 NADH dehydrogenase, FAD-containing subunit; E=1e-111 PFAM: PF01494; FAD binding domain; E=0.015 PF00732; GMC oxidoreductases; E=0.067 PF00070; Pyridine nucleotide-disulphide; E=7.9e-33; NADH dehydrogenase complement(3016868..3018265) Rhodopirellula baltica SH 1 1794983 NP_866883.1 CDS kefA NC_005027.1 3018371 3021940 R PMID: 10202137 best DB hits: BLAST: swissprot:P77338; KEFA_ECOLI POTASSIUM EFFLUX SYSTEM KEFA (AEFA; E=3e-55 gb:AAK02442.1; (AE006072) unknown [Pasteurella multocida]; E=1e-52 swissprot:Q57362; YJEP_HAEIN PROTEIN HI0195.1 PRECURSOR -----; E=9e-49 COG: aefA; COG3264 Small-conductance mechanosensitive channel; E=3e-56 slr0510_1; COG0668 Small-conductance mechanosensitive channel; E=1e-18 PFAM: PF00924; Uncharacterized protein family UPF0; E=1.4e-66; potassium efflux system KefA complement(3018371..3021940) Rhodopirellula baltica SH 1 1794253 NP_866884.1 CDS RB5771 NC_005027.1 3021969 3022139 D hypothetical protein 3021969..3022139 Rhodopirellula baltica SH 1 1791841 NP_866885.1 CDS RB5772 NC_005027.1 3022129 3023556 D hypothetical protein 3022129..3023556 Rhodopirellula baltica SH 1 1790734 NP_866886.1 CDS RB5774 NC_005027.1 3023580 3025166 D PMID: 9389475 best DB hits: BLAST: gb:AAB90372.1; (AE001044) conserved hypothetical protein; E=5e-45 pir:E72265; conserved hypothetical protein - Thermotoga maritima; E=3e-44 embl:CAC23290.1; (AL512965) conserved hypothetical protein; E=1e-39 COG: AF0862; COG1690 Uncharacterized ACR; E=5e-46 PFAM: PF01139; Uncharacterized protein family; E=0.00068; hypothetical protein 3023580..3025166 Rhodopirellula baltica SH 1 1793030 NP_866887.1 CDS RB5776 NC_005027.1 3025207 3026163 R PMID: 10086842 best DB hits: BLAST: pir:B72359; lipopolysaccharide biosynthesis protein BplA -; E=3e-27 ddbj:BAB07562.1; (AP001520) oxidoreductase [Bacillus halodurans]; E=5e-26 ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=3e-23 COG: TM0585; COG0673 Predicted dehydrogenases and related proteins; E=3e-28 PFAM: PF01408; Oxidoreductase, NAD-bin; E=7.5e-40 PF02894; Oxidoreductase, C-termi; E=2.8e-10; NADH-dependent dehydrogenase complement(3025207..3026163) Rhodopirellula baltica SH 1 1791299 NP_866888.1 CDS RB5777 NC_005027.1 3026126 3026287 D hypothetical protein 3026126..3026287 Rhodopirellula baltica SH 1 1795320 NP_866889.1 CDS phoA NC_005027.1 3026289 3028175 R PMID: 8454193 PMID: 3537962 PMID: 7022451 best DB hits: BLAST: swissprot:P35483; PPBH_PSEAE ALKALINE PHOSPHATASE H PRECURSOR; E=2e-11 pdb:1ANI; A Chain A, Alkaline Phosphatase (D153h, K328h) -----; E=2e-11 pdb:2ANH; A Chain A, Alkaline Phosphatase (D153h) ----- pdb:; E=3e-11 COG: PA3296; COG1785 Alkaline phosphatase; E=2e-12 PFAM: PF00245; Alkaline phosphatase; E=2.2e-09; alkaline phosphatase complement(3026289..3028175) Rhodopirellula baltica SH 1 1796299 NP_866890.1 CDS RB5779 NC_005027.1 3028410 3028973 D hypothetical protein 3028410..3028973 Rhodopirellula baltica SH 1 1791613 NP_866891.1 CDS RB5780 NC_005027.1 3028975 3029472 D PMID: 7699720 best DB hits: BLAST: pir:D75276; response regulator - Deinococcus radiodurans (strain R1); E=2e-09 embl:CAB62661.1; (AL133422) hypothetical protein SCM1.03c.; E=4e-08 swissprot:Q55169; RCP1_SYNY3 RESPONSE REGULATOR RCP1 -----; E=4e-08 COG: DR2420; COG0784 CheY-like receiver domains; E=2e-10 VC0790; COG2197 Response regulators consisting of a CheY-like; E=0.002 citB; COG2197 Response regulators consisting of a CheY-like receiver; E=0.004 PFAM: PF00072; Response regulator receiver doma; E=2.1e-10; response regulator 3028975..3029472 Rhodopirellula baltica SH 1 1793394 NP_866892.1 CDS RB5781 NC_005027.1 3029469 3030296 R hypothetical protein complement(3029469..3030296) Rhodopirellula baltica SH 1 1795401 NP_866893.1 CDS trx NC_005027.1 3030299 3031819 R PMID: 9388228 best DB hits: BLAST: swissprot:P56430; THIO_HELPY THIOREDOXIN (TRX) ----- pir:; E=1e-06 swissprot:P80579; THIO_ALIAC THIOREDOXIN (TRX) ----- pdb: 1QUW; E=5e-06 pir:G75612; thioredoxin 1 - Deinococcus radiodurans (strain R1); E=1e-05 COG: jhp0763; COG0526 Thiol-disulfide isomerase and thioredoxins; E=1e-07 PA4061; COG3118 Thioredoxin domain-containing protein; E=2e-06 Cj0147c; COG0526 Thiol-disulfide isomerase and thioredoxins; E=6e-06 PFAM: PF00085; Thioredoxin; E=0.00016; thioredoxin complement(3030299..3031819) Rhodopirellula baltica SH 1 1793197 NP_866894.1 CDS RB5785 NC_005027.1 3031853 3032074 R hypothetical protein complement(3031853..3032074) Rhodopirellula baltica SH 1 1793870 NP_866895.1 CDS RB5786 NC_005027.1 3032121 3033506 R PMID: 9482716 best DB hits: BLAST: pir:B69196; conserved hypothetical protein MTH72 - Methanobacterium; E=7e-20 pir:F69210; conserved hypothetical protein MTH83 - Methanobacterium; E=3e-15 pir:S74665; outer membrane protein mom72, 72K - Synechocystis sp.; E=2e-13 COG: MTH72; COG0457 TPR-repeat-containing proteins; E=7e-21 PFAM: PF00515; TPR Domain; E=0.12; TPR repeat-containing protein complement(3032121..3033506) Rhodopirellula baltica SH 1 1793070 NP_866896.1 CDS RB5787 NC_005027.1 3033490 3033933 R PMID: 9180694 best DB hits: BLAST: pir:T14312; hypothetical protein - carrot transposon Tdc1 -----; E=0.54; hypothetical protein complement(3033490..3033933) Rhodopirellula baltica SH 1 1790753 NP_866897.1 CDS RB5788 NC_005027.1 3034000 3035802 D PMID: 2185975 best DB hits: BLAST: gb:AAF53358.1; (AE003641) CG16885 gene product [Drosophila; E=0.40; ferredoxin 3034000..3035802 Rhodopirellula baltica SH 1 1793185 NP_866898.1 CDS RB5793 NC_005027.1 3035774 3035920 R hypothetical protein complement(3035774..3035920) Rhodopirellula baltica SH 1 1790466 NP_866899.1 CDS RB5794 NC_005027.1 3036089 3036955 R hypothetical protein complement(3036089..3036955) Rhodopirellula baltica SH 1 1794431 NP_866900.1 CDS ptsN NC_005027.1 3036936 3037643 R PMID: 7876255 best DB hits: BLAST: pir:A82153; PTS system, fructose-specific IIABC component VC1822; E=7e-05 ddbj:BAB03332.1; (AB035450) fructose specific permease; E=2e-04 pir:E82153; PTS system, fructose-specific IIABC component VC1826; E=0.001 COG: VC1822_1; COG1762 Phosphotransferase system; E=6e-06 CT290; COG1762 Phosphotransferase system mannitol/fructose-specific; E=1e-04 BH0828_1; COG1762 Phosphotransferase system; E=4e-04 PFAM: PF00359; Phosphoenolpyruvate-dependent sug; E=0.011; PTS system, fructose-specific IIABC component complement(3036936..3037643) Rhodopirellula baltica SH 1 1793072 NP_866901.1 CDS RB5797 NC_005027.1 3037748 3039463 D signal peptide 3037748..3039463 Rhodopirellula baltica SH 1 1793660 NP_866902.1 CDS rpsO NC_005027.1 3039583 3039852 D PMID: 6382163 best DB hits: BLAST: gb:AAK05984.1; AE006418_4 (AE006418) 30S ribosomal protein S15; E=2e-14 ddbj:BAB06127.1; (AP001515) 30S ribosomal protein S15 [Bacillus; E=9e-14 swissprot:P21473; RS15_BACSU 30S RIBOSOMAL PROTEIN S15 (BS18); E=1e-13 COG: BH2408; COG0184 Ribosomal protein S15P/S13E; E=1e-14 PFAM: PF00312; Ribosomal protein S15; E=3.1e-39; 30S ribosomal protein S15 3039583..3039852 Rhodopirellula baltica SH 1 1796938 NP_866903.1 CDS RB5802 NC_005027.1 3039864 3040334 D hypothetical protein 3039864..3040334 Rhodopirellula baltica SH 1 1791924 NP_866904.1 CDS pnp NC_005027.1 3040160 3042616 D PMID: 6382163 best DB hits: BLAST: pir:C81161; polyribonucleotide nucleotidyltransferase NMB0758; E=1e-154 pir:C83052; polyribonucleotide nucleotidyltransferase PA4740; E=1e-154 pir:H81943; probable polyribonucleotide nucleotidyltransferase (EC; E=1e-154 COG: NMB0758; COG1185 Polyribonucleotide nucleotidyltransferase; E=1e-155 PFAM: PF01138; 3' exoribonuclease; E=4e-43 PF00013; KH domain; E=5.3e-07 PF00575; S1 RNA binding domain; E=1.7e-15; polynucleotide phosphorylase 3040160..3042616 Rhodopirellula baltica SH 1 1793865 NP_866905.1 CDS RB5806 NC_005027.1 3042794 3046204 R best DB hits: PFAM: PF01436; NHL repeat; E=0.0032 PF00034; Cytochrome c; E=1.1e-06; hypothetical protein complement(3042794..3046204) Rhodopirellula baltica SH 1 1790340 NP_866906.1 CDS RB5811 NC_005027.1 3046272 3047141 D PMID: 11058132 best DB hits: BLAST: ddbj:BAB04428.1; (AP001509) BH0709~unknown conserved protein in; E=9e-05 pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=0.53; hypothetical protein 3046272..3047141 Rhodopirellula baltica SH 1 1791756 NP_866907.1 CDS phoD NC_005027.1 3047192 3048607 D PMID: 8760916 PMID: 25878 best DB hits: BLAST: swissprot:P42251; PPBD_BACSU ALKALINE PHOSPHATASE D PRECURSOR; E=6e-09 pir:F83157; hypothetical protein PA3910 [imported] - Pseudomonas; E=5e-08 pir:T35097; probable secreted alkaline phosphatase - Streptomyces; E=2e-06; alkaline phosphatase 3047192..3048607 Rhodopirellula baltica SH 1 1791177 NP_866908.1 CDS RB5815 NC_005027.1 3048604 3048807 R hypothetical protein complement(3048604..3048807) Rhodopirellula baltica SH 1 1789986 NP_866909.1 CDS fucA NC_005027.1 3048773 3050641 D PMID: 2803312 PMID: 2894306 best DB hits: BLAST: pir:B82515; alpha-L-fucosidase XF2714 [imported] - Xylella; E=4e-71 embl:CAC24067.1; (AL512981) Hypothetical [Sulfolobus; E=3e-67 pir:S10235; alpha-L-fucosidase (EC 3.2.1.51) precursor - rat; E=8e-51 PFAM: PF01120; Alpha-L-fucosidase; E=4.4e-27; alpha-L-fucosidase 3048773..3050641 Rhodopirellula baltica SH 1 1792574 NP_866910.1 CDS fucO NC_005027.1 3050638 3051705 D PMID: 7765723 PMID: 2553671 best DB hits: BLAST: embl:CAB55711.1; (AL117387) possible oxidoreductase [Streptomyces; E=3e-18 embl:CAC01651.1; (AL391072) oxidoreductase [Streptomyces; E=2e-16 pir:JC2405; D-threo-aldose 1-dehydrogenase (EC 1.1.1.122) -; E=2e-11 COG: BS_iolS; COG0667 Predicted oxidoreductases (related to aryl-alcohol; E=0.005; L-fucose dehydrogenase 3050638..3051705 Rhodopirellula baltica SH 1 1795247 NP_866911.1 CDS fucP NC_005027.1 3051745 3053121 D PMID: 2553671 PMID: 7783647 best DB hits: BLAST: gb:AAF01487.1; AF137263_6 (AF137263) L-fucose permease; E=1e-106 swissprot:P44776; FUCP_HAEIN L-FUCOSE PERMEASE ----- pir:; E=7e-83 swissprot:P11551; FUCP_ECOLI L-FUCOSE PERMEASE ----- pir:; E=1e-49 COG: HI0610; COG0738 Fucose permease; E=6e-84; L-fucose permease 3051745..3053121 Rhodopirellula baltica SH 1 1794341 NP_866912.1 CDS RB5822 NC_005027.1 3053157 3053321 R hypothetical protein complement(3053157..3053321) Rhodopirellula baltica SH 1 1791738 NP_866913.1 CDS rbgA NC_005027.1 3053289 3054269 D essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc); ribosomal biogenesis GTPase 3053289..3054269 Rhodopirellula baltica SH 1 1795615 NP_866914.1 CDS RB5825 NC_005027.1 3054406 3055293 R PMID: 7684040 best DB hits: BLAST: pir:F83498; hypothetical protein PA1166 [imported] - Pseudomonas; E=1e-38 pir:B83447; hypothetical protein PA1597 [imported] - Pseudomonas; E=5e-36 pir:T34190; hypothetical protein D1022.4 - Caenorhabditis elegans; E=4e-33 COG: PA1166; COG0412 Dienelactone hydrolase and related enzymes; E=1e-39 VNG0409C; COG1506 Dipeptidyl; E=0.003 PFAM: PF01738; Dienelactone hydrolase; E=2.8e-44; dienelactone hydrolase complement(3054406..3055293) Rhodopirellula baltica SH 1 1793337 NP_866915.1 CDS RB5826 NC_005027.1 3055383 3056579 R PMID: 8905231 best DB hits: BLAST: pir:S75996; hypothetical protein - Synechocystis sp. (strain PCC; E=2e-05 pir:S77272; hypothetical protein slr0882 - Synechocystis sp. (strain; E=0.023 pir:F72217; conserved hypothetical protein - Thermotoga maritima; E=0.13 COG: sll0496; COG0795 Predicted permeases; E=2e-06; permease complement(3055383..3056579) Rhodopirellula baltica SH 1 1795318 NP_866916.1 CDS RB5829 NC_005027.1 3056745 3056882 D hypothetical protein 3056745..3056882 Rhodopirellula baltica SH 1 1791020 NP_866917.1 CDS cls NC_005027.1 3056879 3058264 D PMID: 1663113 PMID: 9370333 best DB hits: BLAST: pir:B82971; cardiolipin synthase PA5394 [imported] - Pseudomonas; E=3e-42 swissprot:P71040; CLS2_BACSU PROBABLE CARDIOLIPIN SYNTHETASE 2; E=4e-42 swissprot:P31048; CLS_PSEPU PROBABLE CARDIOLIPIN SYNTHETASE; E=5e-42 COG: PA5394; COG1502; E=2e-43 cls; COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiol; E=9e-32 BS_ywjE; COG1502; E=2e-31 PFAM: PF00614; Phospholipase D. Active site motif; E=1.2e-05; cardiolipin synthase 3056879..3058264 Rhodopirellula baltica SH 1 1792985 NP_866918.1 CDS RB5831 NC_005027.1 3058339 3058518 D hypothetical protein 3058339..3058518 Rhodopirellula baltica SH 1 1791874 NP_866919.1 CDS RB5832 NC_005027.1 3058478 3060037 D hypothetical protein 3058478..3060037 Rhodopirellula baltica SH 1 1793792 NP_866920.1 CDS RB5834 NC_005027.1 3060045 3060473 R hypothetical protein complement(3060045..3060473) Rhodopirellula baltica SH 1 1792866 NP_866921.1 CDS RB5837 NC_005027.1 3060527 3061411 R PMID: 1639057 best DB hits: BLAST: gb:AAD09011.1; (AF089862) type-I signal peptidase SipB; E=1e-11 swissprot:P72365; LEP_STAAU SIGNAL PEPTIDASE IB (SPASE IB) (LEADER; E=2e-09 pir:A69708; signal peptidase I sipV - Bacillus subtilis -----; E=2e-08 COG: BS_sipV; COG0681 Signal peptidase I; E=2e-09 PFAM: PF00461; Signal peptidase I; E=1.8e-11; type-I signal peptidase complement(3060527..3061411) Rhodopirellula baltica SH 1 1791410 NP_866922.1 CDS RB5839 NC_005027.1 3061378 3061746 D hypothetical protein 3061378..3061746 Rhodopirellula baltica SH 1 1795581 NP_866923.1 CDS RB5841 NC_005027.1 3061924 3063936 D best DB hits: BLAST: pir:T35944; probable beta-galactosidase - Streptomyces coelicolor; E=2e-04 pir:D83558; transport protein ExbB2 PA0693 [imported] - Pseudomonas; E=0.002 gb:AAA59483.1; (L34155) epiligrin alpha 3 subunit [Homo sapiens]; E=0.009 COG: sll0222; COG1409 Predicted phosphohydrolases; E=0.002; beta-galactosidase 3061924..3063936 Rhodopirellula baltica SH 1 1796616 NP_866924.1 CDS RB5846 NC_005027.1 3064164 3065057 D best DB hits: BLAST: pir:S74796; hypothetical protein sll1020 - Synechocystis sp. (strain; E=4e-11 pir:D69148; dolichyl-phosphate mannose synthase related protein 2 -; E=2e-10 gb:AAB90908.1; (AE001082) dolichol-P-glucose synthetase, ; E=9e-08 COG: sll1020; COG0463 Glycosyltransferases involved in cell wall; E=4e-12 yfbF; COG0463 Glycosyltransferases involved in cell wall biogenesis; E=1e-08 MTH331; COG0463 Glycosyltransferases involved in cell wall; E=2e-08 PFAM: PF00535; Glycosyl transferase; E=2.6e-18; cell wall biosynthesis glycosyltransferase 3064164..3065057 Rhodopirellula baltica SH 1 1796282 NP_866925.1 CDS apt NC_005027.1 3065127 3065747 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(3065127..3065747) Rhodopirellula baltica SH 1 1796340 NP_866926.1 CDS dksA NC_005027.1 3065906 3066328 R PMID: 2180916 best DB hits: BLAST: pir:D71366; probable dnaK suppressor - syphilis spirochete -----; E=1e-09 pir:T34677; hypothetical protein SC1A9.28c SC1A9.28c - Streptomyces; E=9e-07 pir:E81429; dksA-like protein Cj0125c [imported] - Campylobacter; E=5e-06 COG: TP0096; COG1734 DnaK suppressor protein; E=1e-10 PFAM: PF01258; Prokaryotic dksA/traR C4-type zi; E=5e-10; DnaK suppressor protein complement(3065906..3066328) Rhodopirellula baltica SH 1 1790131 NP_866927.1 CDS RB5850 NC_005027.1 3066307 3066498 R hypothetical protein complement(3066307..3066498) Rhodopirellula baltica SH 1 1793062 NP_866928.1 CDS RB5851 NC_005027.1 3066461 3066676 R hypothetical protein complement(3066461..3066676) Rhodopirellula baltica SH 1 1790331 NP_866929.1 CDS RB5852 NC_005027.1 3066813 3070673 D PMID: 9208928 best DB hits: BLAST: ddbj:BAA22069.1; (D89992) myosin heavy chain [Cyprinus carpio]; E=0.001 gb:AAD52842.1; AF134172_1 (AF134172) myosin heavy chain [Pecten; E=0.001 gb:AAB03661.1; (U59295) myosin heavy chain [Placopecten; E=0.001 PFAM: PF00498; FHA domain; E=3.4e-05; hypothetical protein 3066813..3070673 Rhodopirellula baltica SH 1 1791541 NP_866930.1 CDS adh NC_005027.1 3070709 3071869 R PMID: 4578954 best DB hits: BLAST: pir:G72376; alcohol dehydrogenase, zinc-containing - Thermotoga; E=7e-23 gb:AAF17283.1; (AF204805) NosE [Nostoc sp. GSV224]; E=9e-19 ddbj:BAB10455.1; (AB005234) alcohol dehydrogenase-like protein; E=1e-18 COG: TM0436; COG1063 Threonine dehydrogenase and related Zn-dependent; E=7e-24 NMB0546; COG1064 Zn-dependent alcohol dehydrogenases; E=3e-15 PA2188; COG1063 Threonine dehydrogenase and related Zn-dependent; E=3e-15 PFAM: PF00899; ThiF family; E=0.34 PF02032; Phytoene dehydrogenase related; E=0.1 PF01494; FAD binding domain; E=0.0065; alcohol dehydrogenase complement(3070709..3071869) Rhodopirellula baltica SH 1 1791514 NP_866931.1 CDS RB5858 NC_005027.1 3071842 3072543 R best DB hits: BLAST: pir:F69187; epoxidase - Methanobacterium thermoautotrophicum (strain; E=3e-08 pir:A83618; probable transcriptional regulator PA0225 [imported] -; E=5e-06 pir:E69193; conserved hypothetical protein MTH700 - Methanobacterium; E=1e-05 COG: MTH659; COG1396 Predicted transcriptional regulators; E=3e-09 PFAM: PF01381; Helix-turn-helix; E=1.7e-10; transcriptional regulator complement(3071842..3072543) Rhodopirellula baltica SH 1 1793824 NP_866932.1 CDS RB5860 NC_005027.1 3072559 3073902 D best DB hits: BLAST: gb:AAG26463.1; AF285774_3 (AF285774) unknown [Bacteroides; E=5e-64 gb:AAD40705.1; AF048749_1 (AF048749) unknown [Bacteroides; E=3e-36; hypothetical protein 3072559..3073902 Rhodopirellula baltica SH 1 1792639 NP_866933.1 CDS RB5861 NC_005027.1 3073915 3075117 D best DB hits: BLAST: embl:CAB63337.1; (AL032631) contains similarity to Pfam domain:; E=1e-06 gb:AAF57796.1; (AE003802) CG6385 gene product [Drosophila; E=2e-04 ddbj:BAB05760.1; (AP001514) BH2041~unknown conserved protein; E=0.004 COG: BH2041; COG0665 Glycine/D-amino acid oxidases (deaminating); E=3e-04 PFAM: PF00070; Pyridine nucleotide-disulphid; E=0.0033 PF02032; Phytoene dehydrogenase relate; E=0.00044; oxidase 3073915..3075117 Rhodopirellula baltica SH 1 1795849 NP_866934.1 CDS RB5862 NC_005027.1 3075071 3075802 D best DB hits: BLAST: pdb:1FEZ; A Chain A, The Crystal Structure Of Bacillus Cereus; E=2e-07 gb:AAC14004.1; (U33059) phosphatase [Actinosynnema pretiosum; E=8e-07 embl:CAA94730.1; (Z70724) ORF2 [Streptomyces lividans]; E=3e-06 COG: VCA0606; COG1011 Predicted hydrolases of the HAD superfamily; E=5e-06 BH3587; COG0546 Predicted phosphatases; E=2e-04 PFAM: PF00702; haloacid dehalogenase-like hydrolas; E=2.8e-18; phosphatase 3075071..3075802 Rhodopirellula baltica SH 1 1795981 NP_866935.1 CDS RB5866 NC_005027.1 3076242 3077567 D PMID: 1662761 best DB hits: BLAST: gb:AAG60893.1; AF322013_12 (AF322013) ID460 [Bradyrhizobium; E=8e-34 gb:AAD45539.1; U70376_1 (U70376) InsA [Streptomyces netropsis]; E=4e-33 ddbj:BAA19966.1; (D63923) transposase [Acetobacter pasteurianus]; E=2e-27; transposase 3076242..3077567 Rhodopirellula baltica SH 1 1793621 NP_866936.1 CDS RB5867 NC_005027.1 3077578 3077730 D hypothetical protein 3077578..3077730 Rhodopirellula baltica SH 1 1790016 NP_866937.1 CDS RB5869 NC_005027.1 3077796 3078569 R best DB hits: BLAST: embl:CAA86239.1; (Z38113) orf, len: 215, CAI: 0.14, similar to; E=2e-04 ddbj:BAB01069.1; (AB023041) peroxiredoxin Q-like protein; E=0.011 embl:CAB09905.1; (Z97179) Bcp [Mycobacterium leprae]; E=0.032 COG: YIL010w; COG1225 Peroxiredoxins; E=2e-05 PFAM: PF00578; AhpC/TSA family; E=0.037; bacterioferritin comigratory protein (Bcp) complement(3077796..3078569) Rhodopirellula baltica SH 1 1793281 NP_866938.1 CDS ftsH NC_005027.1 3078660 3080117 R best DB hits: BLAST: swissprot:P72991; FTH4_SYNY3 CELL DIVISION PROTEIN FTSH HOMOLOG 4; E=5e-20 gb:AAG19776.1; (AE005063) cell division cycle protein; Cdc48b; E=9e-20 gb:AAF69154.1; AC007915_6 (AC007915) F27F5.8 [Arabidopsis; E=2e-19 COG: slr1604; COG0465 ATP-dependent Zn proteases; E=4e-21 VNG1472G; COG0464 ATPases of the AAA+ class; E=8e-21 PH0201; COG1222 ATP-dependent 26S proteasome regulatory subunit; E=3e-20 PFAM: PF01695; IstB-like ATP binding protein; E=0.25 PF00910; RNA helicase; E=0.35 PF00004; ATPase associated with va; E=8.6e-30; cell division protein FtsH-like protein complement(3078660..3080117) Rhodopirellula baltica SH 1 1797004 NP_866939.1 CDS RB5872 NC_005027.1 3080059 3080310 D hypothetical protein 3080059..3080310 Rhodopirellula baltica SH 1 1791012 NP_866940.1 CDS RB5873 NC_005027.1 3080332 3080766 R PMID: 11792842 best DB hits: PFAM: PF01137; RNA 3'-terminal phosphate cyclase; E=0.31; hypothetical protein complement(3080332..3080766) Rhodopirellula baltica SH 1 1791387 NP_866941.1 CDS RB5874 NC_005027.1 3080798 3080941 R hypothetical protein complement(3080798..3080941) Rhodopirellula baltica SH 1 1791405 NP_866942.1 CDS RB5875 NC_005027.1 3080920 3081204 R hypothetical protein complement(3080920..3081204) Rhodopirellula baltica SH 1 1794919 NP_866943.1 CDS RB5876 NC_005027.1 3081263 3082249 R PMID: 7768349 best DB hits: BLAST: swissprot:P54737; PKN5_MYXXA SERINETHREONINE-PROTEIN KINASE PKN5; E=3e-09 gb:AAF87930.1; AF163841_9 (AF163841) serinethreonine; E=4e-09 swissprot:P54738; PKN6_MYXXA SERINETHREONINE-PROTEIN KINASE PKN6; E=1e-07 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=1e-07 PFAM: PF00069; Protein kinase domain; E=3.8e-08 PF01130; CD36 family; E=0.61; serine/threonine-protein kinase complement(3081263..3082249) Rhodopirellula baltica SH 1 1794579 NP_866944.1 CDS RB5877 NC_005027.1 3082302 3082409 D hypothetical protein 3082302..3082409 Rhodopirellula baltica SH 1 1793067 NP_866945.1 CDS RB5878 NC_005027.1 3082501 3082635 R hypothetical protein complement(3082501..3082635) Rhodopirellula baltica SH 1 1794486 NP_866946.1 CDS RB5880 NC_005027.1 3082619 3083017 R best DB hits: BLAST: embl:CAB55661.1; (AL117385) hypothetical protein [Streptomyces; E=0.38 PFAM: PF00903; Glyoxalase/Bleomycin resistance; E=0.00027; hypothetical protein complement(3082619..3083017) Rhodopirellula baltica SH 1 1794653 NP_866947.1 CDS RB5881 NC_005027.1 3082965 3083636 R best DB hits: BLAST: embl:CAB75424.1; (AJ271623) ORF101~shows homology to one ORF; E=3e-04 embl:CAB53171.1; (AL109969) transcriptional regulator; E=9e-04 PFAM: PF01381; Helix-turn-helix; E=2.5e-05; transcriptional regulator complement(3082965..3083636) Rhodopirellula baltica SH 1 1790349 NP_866948.1 CDS RB5882 NC_005027.1 3083599 3084330 R hypothetical protein complement(3083599..3084330) Rhodopirellula baltica SH 1 1791606 NP_866949.1 CDS RB5884 NC_005027.1 3084242 3084823 R PMID: 9278503 best DB hits: BLAST: swissprot:P76068; YNAK_ECOLI HYPOTHETICAL 9.8 KD PROTEIN IN; E=5e-05 pir:T31008; hypothetical protein 422 - Sulfolobus sp. plasmid pNOB8; E=1e-04 pir:T31049; hypothetical protein 470 - Sulfolobus sp. plasmid pNOB8; E=0.001 COG: ynaK; COG1475 Predicted transcriptional regulators; E=5e-06 PFAM: PF02195; ParB-like nuclease domain; E=1.1e-10; transcriptional regulator complement(3084242..3084823) Rhodopirellula baltica SH 1 1794942 NP_866950.1 CDS RB5886 NC_005027.1 3084898 3086475 R hypothetical protein complement(3084898..3086475) Rhodopirellula baltica SH 1 1792277 NP_866951.1 CDS RB5887 NC_005027.1 3086465 3087343 R PMID: 10384242 best DB hits: BLAST: gb:AAA88919.1; (U13013) ORFB [Leptospira interrogans]; E=1e-46 gb:AAA88916.1; (U13012) ORFB [Leptospira interrogans]; E=5e-46 gb:AAC05649.1; (AF038931) probable transposase-related protein; E=6e-45 COG: DRB0019.2; COG2801 transposase; E=1e-35 PFAM: PF00665; Integrase core domain; E=4.8e-40; transposase complement(3086465..3087343) Rhodopirellula baltica SH 1 1790953 NP_866952.1 CDS RB5888 NC_005027.1 3087346 3087636 R PMID: 2824781 best DB hits: BLAST: gb:AAG58100.1; AE005527_3 (AE005527) unknown protein encoded by; E=0.002 gb:AAG53987.1; AF327445_1 (AF327445) transposase A; E=0.003 gb:AAF28119.1; AF153317_15 (AF153317) InsA [Shigella; E=0.007 COG: PA1937; COG2963 Transposase; E=0.004 PFAM: PF01381; Helix-turn-helix; E=0.53 PF01527; Transposase; E=6.1e-18; transposase A complement(3087346..3087636) Rhodopirellula baltica SH 1 1792181 NP_866953.1 CDS RB5892 NC_005027.1 3087578 3087817 D hypothetical protein 3087578..3087817 Rhodopirellula baltica SH 1 1793393 NP_866954.1 CDS RB5895 NC_005027.1 3088294 3090420 R PMID: 11832943 best DB hits: BLAST: pir:F81221; hypothetical protein NMB0240 [imported] - Neisseria; E=0.018 pir:H81992; probable integral membrane protein NMA0020 [imported] -; E=0.018 embl:CAB95777.1; (AL359949) hypothetical protein [Streptomyces; E=0.20; hypothetical protein complement(3088294..3090420) Rhodopirellula baltica SH 1 1792666 NP_866955.1 CDS RB5896 NC_005027.1 3090375 3090551 D hypothetical protein 3090375..3090551 Rhodopirellula baltica SH 1 1794911 NP_866956.1 CDS trx NC_005027.1 3090681 3091814 R best DB hits: BLAST: pir:D69100; probable protein disulfide-isomerase (EC 5.3.4.1); E=7e-07 gb:AAG20098.1; (AE005089) Vng1905c [Halobacterium sp. NRC-1]; E=9e-05 gb:AAB89512.1; (AE000983) conserved hypothetical protein; E=1e-04 COG: MTH1745; COG0526 Thiol-disulfide isomerase and thioredoxins; E=6e-08 VNG1905C; COG1331 Highly conserved protein containing a thioredoxin; E=9e-06 VCA0647; COG3350 Uncharacterized ACR; E=0.009; protein disulfide-isomerase complement(3090681..3091814) Rhodopirellula baltica SH 1 1790325 NP_866957.1 CDS RB5899 NC_005027.1 3091748 3092014 R hypothetical protein complement(3091748..3092014) Rhodopirellula baltica SH 1 1794122 NP_866958.1 CDS RB5901 NC_005027.1 3092170 3094272 R best DB hits: PFAM: PF00092; von Willebrand factor type A; E=0.0045; hypothetical protein complement(3092170..3094272) Rhodopirellula baltica SH 1 1792699 NP_866959.1 CDS RB5903 NC_005027.1 3094315 3094491 D hypothetical protein 3094315..3094491 Rhodopirellula baltica SH 1 1791270 NP_866960.1 CDS RB5905 NC_005027.1 3094488 3095168 D PMID: 9130712 best DB hits: BLAST: pir:A72340; serinethreonine protein phosphatase - Thermotoga; E=4e-22 gb:AAB68789.1; (U97022) orf; similar to serinethreonine protein; E=7e-22 pir:S75676; probable phosphoesterase (EC 3.1.-.-) sll1387 -; E=4e-20 COG: TM0742; COG0639 Diadenosine tetraphosphatase and related; E=3e-23; serine/threonine protein phosphatase 3094488..3095168 Rhodopirellula baltica SH 1 1792979 NP_866961.1 CDS RB5907 NC_005027.1 3095195 3095761 R signal peptide complement(3095195..3095761) Rhodopirellula baltica SH 1 1791561 NP_866962.1 CDS RB5908 NC_005027.1 3095758 3096315 R best DB hits: BLAST: swissprot:P31589; GSPJ_ERWCA GENERAL SECRETION PATHWAY PROTEIN J; E=0.64; hypothetical protein complement(3095758..3096315) Rhodopirellula baltica SH 1 1792325 NP_866963.1 CDS RB5909 NC_005027.1 3096300 3096749 R hypothetical protein complement(3096300..3096749) Rhodopirellula baltica SH 1 1790310 NP_866964.1 CDS RB5913 NC_005027.1 3096746 3097234 R signal peptide complement(3096746..3097234) Rhodopirellula baltica SH 1 1795123 NP_866965.1 CDS RB5914 NC_005027.1 3097264 3097434 D hypothetical protein 3097264..3097434 Rhodopirellula baltica SH 1 1790868 NP_866966.1 CDS RB5915 NC_005027.1 3097446 3097778 R hypothetical protein complement(3097446..3097778) Rhodopirellula baltica SH 1 1792803 NP_866967.1 CDS birA NC_005027.1 3097957 3098715 R PMID: 3899863 PMID: 1409631 best DB hits: BLAST: gb:AAK05878.1; AE006408_2 (AE006408) bifunctional protein BirA (EC; E=1e-17 pir:A83112; BirA bifunctional protein PA4280 [imported] -; E=1e-16 swissprot:P29906; BIRA_PARDE BIOTIN--[ACETYL-COA-CARBOXYLASE]; E=6e-15 COG: PA4280_2; COG0340 Biotin-(acetyl-CoA carboxylase) ligase; E=1e-17 PFAM: PF01317; Biotin protein ligase catalytic doma; E=6.2e-30 PF02237; Biotin protein ligase C terminal dom; E=5.4e-05; bifunctional protein BirA complement(3097957..3098715) Rhodopirellula baltica SH 1 1794489 NP_866968.1 CDS RB5920 NC_005027.1 3098712 3100763 R PMID: 10322433 best DB hits: BLAST: swissprot:Q00808; HET1_PODAN VEGETATIBLE INCOMPATIBILITY PROTEIN; E=3e-25 swissprot:P49695; PKWA_THECU SERINETHREONINE-PROTEIN; E=5e-21 swissprot:Q9UGP9; WDR5_HUMAN WD-REPEAT PROTEIN 5 ----- embl:; E=8e-20 COG: slr0143_2; COG2319 WD40 repeat protein; E=1e-16 PFAM: PF00400; WD domain, G-beta repeat; E=0.0064; hypothetical protein complement(3098712..3100763) Rhodopirellula baltica SH 1 1795496 NP_866969.1 CDS RB5921 NC_005027.1 3100793 3103288 R best DB hits: BLAST: gb:AAB53736.1; (U95056) surface protein Lk90 [Leptospira; E=0.38 PFAM: PF02368; Bacterial Ig-like domain (grou; E=6.3e-05; surface protein complement(3100793..3103288) Rhodopirellula baltica SH 1 1792568 NP_866970.1 CDS RB5924 NC_005027.1 3103285 3105828 R best DB hits: BLAST: pir:A75582; serine proteinase, subtilase - Deinococcus; E=0.003 COG: DRA0283; COG1404 Subtilisin-like serine proteases; E=3e-04 PFAM: PF00630; Filamin/ABP280 repeat.; E=0.16; serine protease complement(3103285..3105828) Rhodopirellula baltica SH 1 1791954 NP_866971.1 CDS RB5927 NC_005027.1 3105905 3107242 R PMID: 11823852; sulfatase complement(3105905..3107242) Rhodopirellula baltica SH 1 1792424 NP_866972.1 CDS RB5929 NC_005027.1 3107256 3107480 D hypothetical protein 3107256..3107480 Rhodopirellula baltica SH 1 1793955 NP_866973.1 CDS RB5930 NC_005027.1 3107566 3108216 R hypothetical protein complement(3107566..3108216) Rhodopirellula baltica SH 1 1790508 NP_866974.1 CDS RB5932 NC_005027.1 3108299 3110278 R PMID: 8182085 PMID: 2198286 best DB hits: BLAST: pir:E71101; probable geranylgeranyl pyrophosphate synthetase -; E=9e-17 gb:AAD47627.1; (AF153713) octylprenyl diphosphate synthase-like; E=1e-16 swissprot:Q53479; IDSA_METTM BIFUNCTIONAL SHORT CHAIN ISOPRENYL; E=2e-15 COG: PH1072; COG0142 Geranylgeranyl pyrophosphate synthase; E=9e-18 AF0204; COG1852 Uncharacterized ArCR; E=3e-13 NMB0261; COG0142 Geranylgeranyl pyrophosphate synthase; E=4e-13 PFAM: PF01976; Protein of unknown function D; E=6e-24 PF00348; Polyprenyl synthetase; E=3.4e-09; polyprenyl synthetase complement(3108299..3110278) Rhodopirellula baltica SH 1 1795710 NP_866975.1 CDS shc NC_005027.1 3110275 3112260 R PMID: 7894707 best DB hits: BLAST: pir:T35404; probable squalene-hopene cyclase - Streptomyces; E=6e-15 embl:CAA71101.1; (Y09979) squalene-hopene cyclase; E=1e-14 swissprot:P55348; SQHC_RHISN PROBABLE SQUALENE--HOPENE CYCLASE; E=2e-11 COG: slr2089; COG1657 Squalene cyclase; E=4e-09 PFAM: PF00432; Prenyltransferase and squalene ox; E=1.5e-06; squalene-hopene cyclase complement(3110275..3112260) Rhodopirellula baltica SH 1 1791082 NP_866976.1 CDS RB5937 NC_005027.1 3112147 3113067 D hypothetical protein 3112147..3113067 Rhodopirellula baltica SH 1 1791273 NP_866977.1 CDS RB5938 NC_005027.1 3112372 3113484 R signal peptide complement(3112372..3113484) Rhodopirellula baltica SH 1 1791656 NP_866978.1 CDS RB5939 NC_005027.1 3113462 3113581 D hypothetical protein 3113462..3113581 Rhodopirellula baltica SH 1 1789988 NP_866979.1 CDS tadA NC_005027.1 3113588 3114967 D PMID: 8438237 PMID: 11566992 best DB hits: BLAST: gb:AAB36933.1; (U77780) secretory protein kinase [Chlorobium; E=1e-118 gb:AAF40195.1; AF229646_7 (AF229646) CpaF [Caulobacter crescentus]; E=1e-108 gb:AAD38172.2; AF152598_1 (AF152598) TadA [Actinobacillus; E=1e-101 COG: PA4302; COG0630 Predicted ATPases involved in pili and flagella; E=2e-92 PFAM: PF00004; ATPase associated with; E=0.6 PF01580; FtsK/SpoIIIE family; E=0.017 PF01443; Viral (Superfamily 1) RNA hel; E=0.48; secretion system protein TadA 3113588..3114967 Rhodopirellula baltica SH 1 1790993 NP_866980.1 CDS tadB NC_005027.1 3115005 3116048 D PMID: 10880436 best DB hits: BLAST: gb:AAF40196.1; AF229646_8 (AF229646) TadB [Caulobacter crescentus]; E=2e-19 pir:D83108; hypothetical protein PA4301 [imported] - Pseudomonas; E=5e-12 embl:CAB92603.1; (AL356813) integral membrane protein; E=2e-09 COG: PA4301; COG2064 Predicted membrane protein; E=5e-13; secretion system protein TadB 3115005..3116048 Rhodopirellula baltica SH 1 1793971 NP_866981.1 CDS tadC NC_005027.1 3116114 3117100 D PMID: 10880436 best DB hits: BLAST: embl:CAB92604.1; (AL356813) integral membrane protein; E=6e-09 gb:AAK02931.1; (AE006123) TadC [Pasteurella multocida]; E=2e-08 pir:C83108; hypothetical protein PA4300 [imported] - Pseudomonas; E=3e-08 COG: PH0653; COG2064 Predicted membrane protein; E=3e-05; secretion system protein TadC 3116114..3117100 Rhodopirellula baltica SH 1 1791454 NP_866982.1 CDS RB5943 NC_005027.1 3117148 3117546 R PMID: 7699720 PMID: 1454550 best DB hits: BLAST: embl:CAA47908.1; (X67676) phoP [Bacillus subtilis]; E=1e-15 gb:AAA22661.1; (M16775) phoP protein (put.); [Bacillus; E=1e-15 swissprot:P13792; PHOP_BACSU ALKALINE PHOSPHATASE SYNTHESIS; E=1e-15 COG: BS_phoP; COG0745 Response regulators consisting of a CheY-like; E=1e-16 sll0043_4; COG0784 CheY-like receiver domains; E=4e-15 Rv0757; COG0745 Response regulators consisting of a CheY-like; E=4e-15 PFAM: PF00072; Response regulator receiver doma; E=4.8e-28; response regulator complement(3117148..3117546) Rhodopirellula baltica SH 1 1793075 NP_866983.1 CDS RB5945 NC_005027.1 3117554 3118402 R best DB hits: BLAST: ddbj:BAA75358.1; (AB013363) YvaM [Bacillus halodurans] -----; E=0.63 PFAM: PF02230; Phospholipase/Carboxylesterase; E=0.0014; hypothetical protein complement(3117554..3118402) Rhodopirellula baltica SH 1 1795413 NP_866984.1 CDS adh NC_005027.1 3118447 3119487 R PMID: 3622514 best DB hits: BLAST: prf:2104227E; 2,3-butanediol dehydrogenase [Pseudomonas putida]; E=3e-40 pir:C83128; 2,3-butanediol dehydrogenase PA4153 [imported] -; E=4e-40 ddbj:BAB03906.1; (AP001507) sorbitol dehydrogenase [Bacillus; E=1e-38 COG: PA4153; COG1063 Threonine dehydrogenase and related Zn-dependent; E=4e-41 Rv3086; COG1062 Zn-dependent alcohol dehydrogenases, class III; E=7e-26 PFAM: PF00107; Zinc-binding dehydrogenases; E=4.4e-92; Zn-dependent alcohol dehydrogenase complement(3118447..3119487) Rhodopirellula baltica SH 1 1795198 NP_866985.1 CDS RB5952 NC_005027.1 3119900 3121381 D best DB hits: BLAST: pir:T50226; hypothetical protein SPAC607.06c [imported] - fission; E=1e-19 embl:CAA86272.1; (Z38125) orf, len: 696, CAI: 0.15 [Saccharomyces; E=3e-13 pir:T42995; hypothetical protein - fission yeast; E=4e-10; hypothetical protein 3119900..3121381 Rhodopirellula baltica SH 1 1790884 NP_866986.1 CDS RB5955 NC_005027.1 3121488 3122021 D signal peptide 3121488..3122021 Rhodopirellula baltica SH 1 1793515 NP_866987.1 CDS RB5957 NC_005027.1 3122093 3122557 D hypothetical protein 3122093..3122557 Rhodopirellula baltica SH 1 1793534 NP_866988.1 CDS RB5960 NC_005027.1 3122679 3124154 R signal peptide complement(3122679..3124154) Rhodopirellula baltica SH 1 1791636 NP_866989.1 CDS RB5961 NC_005027.1 3124275 3124895 R best DB hits: BLAST: pir:B75318; ferripyochelin-binding protein - Deinococcus radiodurans; E=1e-38 gb:AAB88579.1; (M82832) unknown [Pseudomonas aeruginosa]; E=2e-34 swissprot:P40882; Y1F3_PSEAE HYPOTHETICAL PROTEIN PA3753 -----; E=2e-34 COG: DR2089; COG0663 Carbonic anhydrases/acetyltransferases, isoleucine; E=1e-39 PFAM: PF00132; Bacterial transferase hexapeptide (f; E=0.67; ferripyochelin-binding protein complement(3124275..3124895) Rhodopirellula baltica SH 1 1794714 NP_866990.1 CDS RB5963 NC_005027.1 3125043 3125837 D hypothetical protein 3125043..3125837 Rhodopirellula baltica SH 1 1791884 NP_866991.1 CDS RB5964 NC_005027.1 3125819 3128293 R best DB hits: BLAST: pir:H70302; conserved hypothetical protein aq_035 - Aquifex aeolicus; E=1e-28 pir:A71678; probable response regulatory protein RP237 - Rickettsia; E=3e-26 pir:E72220; conserved hypothetical protein - Thermotoga maritima; E=1e-24 COG: aq_035_2; COG2199 Diguanylate cyclase/phosphodiesterase domain 1; E=1e-29 TM1699_2; COG2206 HD-GYP domain; E=1e-24 aq_563_2; COG2199 Diguanylate cyclase/phosphodiesterase domain 1; E=2e-24 PFAM: PF01966; HD domain; E=6.6e-08 PF00989; PAS domain; E=0.032 PF00990; GGDEF domain; E=3.6e-53; response regulatory protein complement(3125819..3128293) Rhodopirellula baltica SH 1 1794734 NP_866992.1 CDS RB5966 NC_005027.1 3128115 3128537 D hypothetical protein 3128115..3128537 Rhodopirellula baltica SH 1 1793605 NP_866993.1 CDS RB5967 NC_005027.1 3128254 3128520 R hypothetical protein complement(3128254..3128520) Rhodopirellula baltica SH 1 1790648 NP_866994.1 CDS RB5968 NC_005027.1 3128602 3129225 D best DB hits: BLAST: pir:B72234; RNA polymerase sigma-E factor - Thermotoga maritima; E=0.42 gb:AAC14121.1; (AF056199) sigma factor E [Streptomyces; E=0.80 PFAM: PF00140; Sigma-70 factor; E=4.9e-05 PF00196; Bacterial regulatory proteins,; E=0.19; RNA polymerase sigma-E factor 3128602..3129225 Rhodopirellula baltica SH 1 1791429 NP_866995.1 CDS recQ NC_005027.1 3129301 3131550 D PMID: 3027506 best DB hits: BLAST: pir:E83226; ATP-dependent DNA helicase RecQ PA3344 [imported] -; E=1e-127 pir:T34609; probable helicase - Streptomyces coelicolor -----; E=1e-126 pir:G75413; DNA helicase RecQ - Deinococcus radiodurans (strain R1); E=1e-125 COG: PA3344; COG0514 Superfamily II DNA helicase; E=1e-128 slr0083; COG0513 Superfamily II DNA and RNA helicases; E=1e-12 PFAM: PF00271; Helicase conserved C-terminal dom; E=0.15 PF00270; DEAD/DEAH box helicase; E=2.2e-29 PF00271; Helicase conserved C-terminal dom; E=1.9e-25; ATP-dependent DNA helicase RecQ 3129301..3131550 Rhodopirellula baltica SH 1 1795877 NP_866996.1 CDS rbsC NC_005027.1 3131592 3132572 R PMID: 7921236 best DB hits: BLAST: pir:H83402; membrane protein component of ABC ribose transporter; E=2e-51 gb:AAK02238.1; (AE006050) RbsC [Pasteurella multocida]; E=2e-24 swissprot:P44736; RBSC_HAEIN RIBOSE TRANSPORT SYSTEM PERMEASE; E=3e-24 COG: PA1948; COG1172 Ribose/xylose/arabinose/galactoside ABC-type; E=1e-52 rbsC; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport; E=2e-20 TM0112; COG1172 Ribose/xylose/arabinose/galactoside ABC-type; E=5e-17 PFAM: PF02653; Branched-chain amino acid transp; E=0.58; ribose transport system permease RbsC complement(3131592..3132572) Rhodopirellula baltica SH 1 1793127 NP_866997.1 CDS rbsA NC_005027.1 3132545 3134113 R PMID: 3086314 best DB hits: BLAST: pir:G83402; ribose transport protein RbsA PA1947 [imported] -; E=1e-103 gb:AAK05735.1; AE006394_5 (AE006394) ribose ABC transporter ATP; E=3e-85 pir:E72314; ribose ABC transporter ATP-binding protein - Thermotoga; E=4e-83 COG: PA1947; COG1129 ABC-type sugar (aldose) transport system, ATPase; E=1e-104 PFAM: PF00005; ABC transporter; E=4.5e-45; ribose transport ATP-binding protein RbsA complement(3132545..3134113) Rhodopirellula baltica SH 1 1792079 NP_866998.1 CDS rbsB NC_005027.1 3134110 3135243 R PMID: 6313683 best DB hits: BLAST: pir:F83402; binding protein component precursor of ABC ribose; E=4e-88 gb:AAK03409.1; (AE006170) unknown [Pasteurella multocida]; E=3e-42 pir:C82497; ribose ABC transporter, periplasmic D-ribose-binding; E=6e-29 COG: PA1946; COG1879 Periplasmic sugar-binding proteins; E=4e-89 BH3727; COG1609 Transcriptional regulators; E=4e-09 HI1111; COG1879 Periplasmic sugar-binding proteins; E=5e-08 PFAM: PF00532; Periplasmic binding proteins; E=1.3e-11; D-ribose-binding periplasmic protein complement(3134110..3135243) Rhodopirellula baltica SH 1 1790800 NP_866999.1 CDS RB5976 NC_005027.1 3135318 3135482 D hypothetical protein 3135318..3135482 Rhodopirellula baltica SH 1 1794969 NP_867000.1 CDS RB5979 NC_005027.1 3135599 3136117 D signal peptide 3135599..3136117 Rhodopirellula baltica SH 1 1791616 NP_867001.1 CDS RB5982 NC_005027.1 3136114 3137451 D PMID: 20365717 best DB hits: BLAST: pir:H82642; hypothetical protein XF1738 [imported] - Xylella; E=3e-46 ddbj:BAB09974.1; (AB010692) gene_id:K18I23.11~unknown protein; E=3e-16 COG: XF1738; COG3202 ATP/ADP translocase; E=3e-47 PFAM: PF01681; C6 domain; E=0.37; ATP/ADP translocase 3136114..3137451 Rhodopirellula baltica SH 1 1794346 NP_867002.1 CDS argB NC_005027.1 3137623 3138486 D PMID: 10393305 best DB hits: BLAST: swissprot:P73326; ARGB_SYNY3 ACETYLGLUTAMATE KINASE (NAG KINASE); E=3e-58 swissprot:O67848; ARGB_AQUAE ACETYLGLUTAMATE KINASE (NAG KINASE); E=6e-58 swissprot:Q60382; ARGB_METJA PROBABLE ACETYLGLUTAMATE KINASE (NAG; E=2e-56 COG: slr1898; COG0548 Acetylglutamate kinase; E=3e-59 PFAM: PF00696; Amino acid kinase; E=2.1e-40; acetylglutamate kinase 3137623..3138486 Rhodopirellula baltica SH 1 1795838 NP_867003.1 CDS RB5984 NC_005027.1 3138483 3140003 D PMID: 9002618 best DB hits: BLAST: swissprot:Q58131; ARGD_METJA ACETYLORNITHINE AMINOTRANSFERASE; E=2e-08 swissprot:O66442; ARGD_AQUAE ACETYLORNITHINE AMINOTRANSFERASE; E=5e-05 swissprot:O04866; ARGD_ALNGL ACETYLORNITHINE AMINOTRANSFERASE,; E=8e-04 COG: MJ0721; COG0160 PLP-dependent aminotransferases; E=2e-09; acetylornithine aminotransferase 3138483..3140003 Rhodopirellula baltica SH 1 1790374 NP_867004.1 CDS argF NC_005027.1 3140000 3140941 D PMID: 3072022 PMID: 9275160 best DB hits: BLAST: ddbj:BAB06613.1; (AP001517) ornithine carbamoyltransferase; E=7e-72 swissprot:O93656; OTC_PYRAB ORNITHINE CARBAMOYLTRANSFERASE; E=2e-68 gb:AAD09004.1; (AF083209) ornithine carbamoyltransferase; E=4e-68 COG: BH2894; COG0078 Ornithine carbamoyltransferase; E=7e-73 PFAM: PF02703; Early E1A protein; E=0.31 PF02729; Aspartate/ornithine carbamoyltransf; E=7.3e-43 PF00185; Aspartate/ornithine carbamoyltransf; E=2.7e-48; ornithine carbamoyltransferase 3140000..3140941 Rhodopirellula baltica SH 1 1790857 NP_867005.1 CDS RB5988 NC_005027.1 3140970 3141494 R signal peptide complement(3140970..3141494) Rhodopirellula baltica SH 1 1793850 NP_867006.1 CDS RB5989 NC_005027.1 3141554 3141715 R hypothetical protein complement(3141554..3141715) Rhodopirellula baltica SH 1 1796076 NP_867007.1 CDS RB5990 NC_005027.1 3141577 3141918 R hypothetical protein complement(3141577..3141918) Rhodopirellula baltica SH 1 1794593 NP_867008.1 CDS RB5991 NC_005027.1 3141889 3143013 D best DB hits: BLAST: pir:G69146; capsular polysaccharide biosynthesis protein -; E=6e-16 swissprot:O05083; YG98_HAEIN GLYCOSYL TRANSFERASE HI1698; E=9e-16 embl:CAA72352.1; (Y11648) wlaC [Campylobacter jejuni]; E=5e-15 COG: MTH362; COG0438 Predicted glycosyltransferases; E=5e-17 PFAM: PF00534; Glycosyl transferases group 1; E=1.8e-36; capsular polysaccharide biosynthesis protein 3141889..3143013 Rhodopirellula baltica SH 1 1795176 NP_867009.1 CDS RB5992 NC_005027.1 3143036 3143278 D hypothetical protein 3143036..3143278 Rhodopirellula baltica SH 1 1795830 NP_867010.1 CDS RB5993 NC_005027.1 3143179 3144207 D PMID: 3419283 PMID: 2304552 PMID: 1404390 best DB hits: BLAST: pir:F82202; hypothetical protein VC1418 [imported] - Vibrio cholerae; E=5e-11 gb:AAF32408.1; (AF229435) lipase precursor [Rhizopus arrhizus]; E=6e-10 swissprot:P19515; LIP_RHIMI LIPASE PRECURSOR (TRIACYLGLYCEROL; E=7e-10 PFAM: PF01764; Lipase (class 3); E=1.3e-23; lipase 3143179..3144207 Rhodopirellula baltica SH 1 1794591 NP_867011.1 CDS RB5995 NC_005027.1 3144218 3145246 D best DB hits: BLAST: pir:T35917; probable regulatory protein - Streptomyces coelicolor; E=4e-08 swissprot:Q51664; NORQ_PARDE NORQ PROTEIN ----- gb: AAA68972.1; E=3e-07 swissprot:Q51481; NIRQ_PSEAE DENITRIFICATION REGULATORY PROTEIN; E=2e-06 COG: PA0520; COG0714 MoxR-like ATPases; E=1e-07; regulatory protein 3144218..3145246 Rhodopirellula baltica SH 1 1792222 NP_867012.1 CDS RB5996 NC_005027.1 3145288 3145458 R hypothetical protein complement(3145288..3145458) Rhodopirellula baltica SH 1 1792140 NP_867013.1 CDS rpiB NC_005027.1 3145505 3146023 D catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B 3145505..3146023 Rhodopirellula baltica SH 1 1792021 NP_867014.1 CDS RB5999 NC_005027.1 3146080 3146982 R PMID: 8402918 PMID: 9311978 PMID: 9082984 best DB hits: BLAST: ddbj:BAB06184.1; (AP001515) integraserecombinase [Bacillus; E=3e-55 ddbj:BAB05248.1; (AP001512) integraserecombinase [Bacillus; E=9e-53 gb:AAC64162.1; (AF093548) tyrosine recombinase XerD; E=2e-49 COG: BH2465; COG0582 Integrase; E=2e-56 PFAM: PF02899; Phage integrase, N-terminal S; E=8.6e-26 PF00589; Phage integrase; E=3.9e-44; integrase/recombinase complement(3146080..3146982) Rhodopirellula baltica SH 1 1795159 NP_867015.1 CDS RB6002 NC_005027.1 3147011 3147349 R hypothetical protein complement(3147011..3147349) Rhodopirellula baltica SH 1 1792754 NP_867016.1 CDS RB6003 NC_005027.1 3147328 3148674 R signal peptide complement(3147328..3148674) Rhodopirellula baltica SH 1 1795712 NP_867017.1 CDS RB6005 NC_005027.1 3148678 3148950 R hypothetical protein complement(3148678..3148950) Rhodopirellula baltica SH 1 1796584 NP_867018.1 CDS RB6007 NC_005027.1 3149031 3149564 R hypothetical protein complement(3149031..3149564) Rhodopirellula baltica SH 1 1792149 NP_867019.1 CDS RB6009 NC_005027.1 3149573 3149941 R hypothetical protein complement(3149573..3149941) Rhodopirellula baltica SH 1 1792392 NP_867020.1 CDS RB6010 NC_005027.1 3149911 3150072 D hypothetical protein 3149911..3150072 Rhodopirellula baltica SH 1 1790470 NP_867021.1 CDS RB6011 NC_005027.1 3150083 3150235 R hypothetical protein complement(3150083..3150235) Rhodopirellula baltica SH 1 1796680 NP_867022.1 CDS RB6012 NC_005027.1 3150246 3151547 R PMID: 1662761 best DB hits: BLAST: gb:AAD45539.1; U70376_1 (U70376) InsA [Streptomyces netropsis]; E=5e-33 gb:AAG60893.1; AF322013_12 (AF322013) ID460 [Bradyrhizobium; E=8e-33 ddbj:BAA19966.1; (D63923) transposase [Acetobacter pasteurianus]; E=1e-26; transposase complement(3150246..3151547) Rhodopirellula baltica SH 1 1791763 NP_867023.1 CDS RB6013 NC_005027.1 3151570 3152304 R hypothetical protein complement(3151570..3152304) Rhodopirellula baltica SH 1 1790710 NP_867024.1 CDS RB6014 NC_005027.1 3152367 3152807 D signal peptide 3152367..3152807 Rhodopirellula baltica SH 1 1791620 NP_867025.1 CDS RB6016 NC_005027.1 3152860 3153426 D hypothetical protein 3152860..3153426 Rhodopirellula baltica SH 1 1792361 NP_867026.1 CDS RB6018 NC_005027.1 3153562 3154134 R hypothetical protein complement(3153562..3154134) Rhodopirellula baltica SH 1 1791054 NP_867027.1 CDS RB6019 NC_005027.1 3154198 3154683 R hypothetical protein complement(3154198..3154683) Rhodopirellula baltica SH 1 1793519 NP_867028.1 CDS RB6021 NC_005027.1 3154768 3155358 R best DB hits: BLAST: gb:AAB64177.1; (AF012345) beta-amylase [Hordeum vulgare]; E=0.71; hypothetical protein complement(3154768..3155358) Rhodopirellula baltica SH 1 1795036 NP_867029.1 CDS RB6025 NC_005027.1 3155504 3158788 R best DB hits: PFAM: PF00404; Dockerin type I repeat; E=0.21 PF00160; Cyclophilin type peptidyl-proly; E=0.12; hypothetical protein complement(3155504..3158788) Rhodopirellula baltica SH 1 1790435 NP_867030.1 CDS RB6030 NC_005027.1 3158845 3159012 R hypothetical protein complement(3158845..3159012) Rhodopirellula baltica SH 1 1790622 NP_867031.1 CDS RB6031 NC_005027.1 3158984 3160462 R hypothetical protein complement(3158984..3160462) Rhodopirellula baltica SH 1 1791772 NP_867032.1 CDS RB6033 NC_005027.1 3160459 3162768 R PMID: 7768349 best DB hits: BLAST: pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=2e-41 ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=9e-39 swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=8e-36 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=2e-42 PFAM: PF00069; Protein kinase domain; E=3.3e-46 PF00515; TPR Domain; E=0.1; serine/threonine protein kinase complement(3160459..3162768) Rhodopirellula baltica SH 1 1794418 NP_867033.1 CDS RB6034 NC_005027.1 3162765 3163394 R PMID: 7751307 best DB hits: BLAST: swissprot:P44790; RPOE_HAEIN RNA POLYMERASE SIGMA-E FACTOR; E=1e-11 gb:AAK03873.1; (AE006215) RpoE [Pasteurella multocida]; E=3e-11 pir:C82583; RNA polymerase sigma-H factor XF2239 [imported] -; E=4e-10 COG: HI0628; COG1595 DNA-directed RNA polymerase specialized sigma; E=1e-12 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=0.0021; RNA polymerase sigma-E factor complement(3162765..3163394) Rhodopirellula baltica SH 1 1793644 NP_867034.1 CDS RB6037 NC_005027.1 3163372 3163548 R hypothetical protein complement(3163372..3163548) Rhodopirellula baltica SH 1 1793733 NP_867035.1 CDS RB6038 NC_005027.1 3163457 3163678 R hypothetical protein complement(3163457..3163678) Rhodopirellula baltica SH 1 1795627 NP_867036.1 CDS RB6040 NC_005027.1 3163887 3164828 R best DB hits: BLAST: pir:G82309; probable hemolysin VC0558 [imported] - Vibrio cholerae; E=4e-10 gb:AAG20419.1; (AE005114) hemolysin protein; Hlp [Halobacterium; E=6e-09 ddbj:BAA16497.1; (D90888) similar to [SwissProt Accession Number; E=9e-09 COG: VC0558; COG1253 Uncharacterized CBS domain-containing proteins; E=4e-11 PFAM: PF01595; Domain of unknown function DUF21; E=1.8e-17; hemolysin protein complement(3163887..3164828) Rhodopirellula baltica SH 1 1795047 NP_867037.1 CDS RB6042 NC_005027.1 3164825 3166072 R best DB hits: BLAST: pir:G82309; probable hemolysin VC0558 [imported] - Vibrio cholerae; E=6e-19 gb:AAG20419.1; (AE005114) hemolysin protein; Hlp [Halobacterium; E=1e-16 ddbj:BAA16497.1; (D90888) similar to [SwissProt Accession Number; E=4e-16 COG: VC0558; COG1253 Uncharacterized CBS domain-containing proteins; E=6e-20 PFAM: PF01595; Domain of unknown function DUF2; E=0.00013 PF00571; CBS domain; E=0.0037; hemolysin protein complement(3164825..3166072) Rhodopirellula baltica SH 1 1794623 NP_867038.1 CDS RB6045 NC_005027.1 3166069 3167952 R hypothetical protein complement(3166069..3167952) Rhodopirellula baltica SH 1 1796611 NP_867039.1 CDS cysC NC_005027.1 3168042 3168851 R PMID: 2828368 PMID: 1316900 best DB hits: BLAST: gb:AAG42463.1; AF308468_4 (AF308468) APS kinase [Klebsiella; E=2e-48 swissprot:P23846; CYSC_ECOLI ADENYLYLSULFATE KINASE (APS KINASE); E=7e-47 pir:JN0328; adenylylsulfate kinase (EC 2.7.1.25) precursor -; E=3e-46 COG: cysC; COG0529 Adenylylsulfate kinase and related kinases; E=6e-48 PFAM: PF01121; Uncharacterized protein famil; E=0.34 PF00005; ABC transporter; E=0.021 PF00910; RNA helicase; E=0.052; adenylylsulfate kinase complement(3168042..3168851) Rhodopirellula baltica SH 1 1790805 NP_867040.1 CDS RB6051 NC_005027.1 3168891 3170468 R hypothetical protein complement(3168891..3170468) Rhodopirellula baltica SH 1 1793445 NP_867041.1 CDS RB6053 NC_005027.1 3170500 3171969 R PMID: 12024217 best DB hits: PFAM: PF00884; Sulfatase; E=0.34; sulfatase complement(3170500..3171969) Rhodopirellula baltica SH 1 1796667 NP_867042.1 CDS RB6054 NC_005027.1 3171912 3175166 R hypothetical protein complement(3171912..3175166) Rhodopirellula baltica SH 1 1794725 NP_867043.1 CDS moxR NC_005027.1 3175256 3176359 R PMID: 8997703 best DB hits: BLAST: pir:H70121; methanol dehydrogenase regulator (moxR) homolog - Lyme; E=3e-71 embl:CAA65298.1; (X96434) moxR [Borrelia burgdorferi] -----; E=9e-69 ddbj:BAB04450.1; (AP001509) BH0731~unknown conserved protein; E=3e-67 COG: BB0176; COG0714 MoxR-like ATPases; E=3e-72 PFAM: PF00004; ATPase associated with va; E=0.0005 PF01078; Magnesium chelatase, subunit Chl; E=1e-12; MoxR protein complement(3175256..3176359) Rhodopirellula baltica SH 1 1793835 NP_867044.1 CDS RB6057 NC_005027.1 3176103 3178871 D best DB hits: PFAM: PF00432; Prenyltransferase and squalene ox; E=0.69; hypothetical protein 3176103..3178871 Rhodopirellula baltica SH 1 1790631 NP_867045.1 CDS pmm NC_005027.1 3178888 3180738 R PMID: 8083177 best DB hits: BLAST: gb:AAD56627.1; AF165218_2 (AF165218) Pgm [Streptococcus; E=2e-83 ddbj:BAB04825.1; (AP001510) phosphomannomutase [Bacillus; E=5e-79 swissprot:P18159; YHXB_BACSU PROBABLE PHOSPHOMANNOMUTASE (PMM); E=1e-77 COG: BH1106; COG1109 Phosphomannomutase; E=5e-80 VC2095; COG0033 Phosphoglucomutase; E=3e-11 PH0923; COG1109 Phosphomannomutase; E=5e-11 PFAM: PF02878; Phosphoglucomutase/phosphomannomu; E=1.6e-13 PF02880; Phosphoglucomutase/phosphomannomu; E=0.023 PF00408; Phosphoglucomutase/phosphomannomu; E=0.76; phosphomannomutase complement(3178888..3180738) Rhodopirellula baltica SH 1 1793074 NP_867046.1 CDS RB6062 NC_005027.1 3180701 3180874 D hypothetical protein 3180701..3180874 Rhodopirellula baltica SH 1 1791382 NP_867047.1 CDS corA NC_005027.1 3180908 3182005 R PMID: 8314774 best DB hits: BLAST: pir:S77053; magnesiumcobalt transport protein sll0671 -; E=7e-61 pir:S75981; magnesiumcobalt transport protein sll0507 -; E=2e-52 pir:H72360; divalent cation transport-related protein - Thermotoga; E=3e-51 COG: sll0671; COG0598 Mg2+ and Co2+ transporters; E=7e-62 PFAM: PF01544; CorA-like Mg2+ transporter protein; E=1.9e-79; magnesium/cobalt transport protein complement(3180908..3182005) Rhodopirellula baltica SH 1 1791732 NP_867048.1 CDS smc NC_005027.1 3182052 3185756 R PMID: 9573042 best DB hits: BLAST: ddbj:BAB06206.1; (AP001515) chromosome segregation SMC protein; E=1e-119 swissprot:P51834; SMC_BACSU CHROMOSOME PARTITION PROTEIN SMC -----; E=1e-106 pir:JC4819; minichromosome stabilizing protein SMC - Bacillus subtilis; E=1e-104 COG: BH2487; COG1196 Chromosome segregation ATPases; E=1e-120 PFAM: PF00005; ABC transporter; E=0.038 PF02463; SMC domain N terminal domain; E=5.4e-79 PF02371; Transposase IS116/IS110/IS902; E=0.65; chromosome partition protein Smc complement(3182052..3185756) Rhodopirellula baltica SH 1 1790065 NP_867049.1 CDS RB6067 NC_005027.1 3185766 3186659 R hypothetical protein complement(3185766..3186659) Rhodopirellula baltica SH 1 1794526 NP_867050.1 CDS RB6070 NC_005027.1 3186811 3187416 D PMID: 9358175 best DB hits: BLAST: pir:S74697; hypothetical protein sll1193 - Synechocystis sp. (strain; E=3e-23 pir:T36856; hypothetical protein SCI5.03 - Streptomyces coelicolor; E=4e-17 pir:H82621; hypothetical protein XF1912 [imported] - Xylella; E=5e-17 COG: sll1193; COG1403 Restriction endonuclease; E=3e-24 PFAM: PF01844; HNH endonuclease; E=9.6e-11; restriction endonuclease 3186811..3187416 Rhodopirellula baltica SH 1 1790959 NP_867051.1 CDS RB6071 NC_005027.1 3187463 3188104 D hypothetical protein 3187463..3188104 Rhodopirellula baltica SH 1 1795534 NP_867052.1 CDS RB6073 NC_005027.1 3188416 3188607 R hypothetical protein complement(3188416..3188607) Rhodopirellula baltica SH 1 1794963 NP_867053.1 CDS RB6075 NC_005027.1 3188548 3190110 D PMID: 8843436 best DB hits: BLAST: ddbj:BAB06714.1; (AP001517) BH2995~unknown conserved protein; E=2e-95 embl:CAB71916.1; (AL138668) secreted protein.; E=2e-90 embl:CAB71258.1; (AL138598) secreted protein.; E=1e-79 PFAM: PF02871; NAD/NADP octopine/nopaline dehy; E=0.52 PF00070; Pyridine nucleotide-disulphide; E=0.0043 PF02254; KTN NAD-binding domain; E=0.011; secreted protein 3188548..3190110 Rhodopirellula baltica SH 1 1791862 NP_867054.1 CDS RB6078 NC_005027.1 3190235 3190855 D Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor SigZ 3190235..3190855 Rhodopirellula baltica SH 1 1795173 NP_867055.1 CDS RB6081 NC_005027.1 3190877 3191035 R hypothetical protein complement(3190877..3191035) Rhodopirellula baltica SH 1 1793529 NP_867056.1 CDS RB6084 NC_005027.1 3191045 3191533 R hypothetical protein complement(3191045..3191533) Rhodopirellula baltica SH 1 1793912 NP_867057.1 CDS RB6087 NC_005027.1 3191537 3191911 D PMID: 11474104 best DB hits: BLAST: gb:AAD28577.1; AF121341_1 (AF121341) response regulator; E=0.038 pir:F82618; chemotaxis-related protein kinase XF1952 [imported] -; E=0.10 pir:S76044; hypothetical protein slr0322 - Synechocystis sp. (strain; E=0.10 PFAM: PF00072; Response regulator receiver doma; E=3.5e-05; response regulator 3191537..3191911 Rhodopirellula baltica SH 1 1790172 NP_867058.1 CDS panD NC_005027.1 3191913 3192383 D Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 3191913..3192383 Rhodopirellula baltica SH 1 1789996 NP_867059.1 CDS RB6092 NC_005027.1 3192387 3193472 D PMID: 11214968 best DB hits: BLAST: pir:C82445; hypothetical protein VCA0550 [imported] - Vibrio; E=0.16; hypothetical protein 3192387..3193472 Rhodopirellula baltica SH 1 1794400 NP_867060.1 CDS RB6095 NC_005027.1 3193586 3195553 D PMID: 10484179 best DB hits: BLAST: ddbj:BAB04212.1; (AP001508) BH0493~unknown [Bacillus halodurans]; E=4e-12 gb:AAF77061.1; AF266466_3 (AF266466) hexuronic acid; E=0.003 gb:AAK05726.1; AE006393_5 (AE006393) glucuronate isomerase (EC; E=0.57; hypothetical protein 3193586..3195553 Rhodopirellula baltica SH 1 1791114 NP_867061.1 CDS RB6097 NC_005027.1 3195567 3195869 D hypothetical protein 3195567..3195869 Rhodopirellula baltica SH 1 1794844 NP_867062.1 CDS RB6098 NC_005027.1 3195620 3195847 D hypothetical protein 3195620..3195847 Rhodopirellula baltica SH 1 1794850 NP_867063.1 CDS RB6100 NC_005027.1 3195902 3198724 D best DB hits: PFAM: PF02368; Bacterial Ig-like domain (group; E=0.091; hypothetical protein 3195902..3198724 Rhodopirellula baltica SH 1 1793035 NP_867064.1 CDS RB6101 NC_005027.1 3198799 3200118 D PMID: 11823852; hypothetical protein 3198799..3200118 Rhodopirellula baltica SH 1 1790314 NP_867065.1 CDS RB6102 NC_005027.1 3200237 3200968 R signal peptide complement(3200237..3200968) Rhodopirellula baltica SH 1 1791581 NP_867066.1 CDS RB6104 NC_005027.1 3201184 3202683 R hypothetical protein complement(3201184..3202683) Rhodopirellula baltica SH 1 1793693 NP_867067.1 CDS RB6106 NC_005027.1 3202741 3202908 D hypothetical protein 3202741..3202908 Rhodopirellula baltica SH 1 1790719 NP_867068.1 CDS RB6107 NC_005027.1 3202928 3205048 R PMID: 10710307 best DB hits: BLAST: pir:B81207; hypothetical protein NMB0372 [imported] - Neisseria; E=0.016 pir:A81174; hypothetical protein NMB0655 [imported] - Neisseria; E=0.022 pir:B81783; hypothetical protein NMA2115 [imported] - Neisseria; E=0.070; hypothetical protein complement(3202928..3205048) Rhodopirellula baltica SH 1 1795753 NP_867069.1 CDS RB6108 NC_005027.1 3204895 3208185 R best DB hits: PFAM: PF00515; TPR Domain; E=0.036; signal peptide complement(3204895..3208185) Rhodopirellula baltica SH 1 1791571 NP_867070.1 CDS RB6112 NC_005027.1 3208246 3208854 R hypothetical protein complement(3208246..3208854) Rhodopirellula baltica SH 1 1792378 NP_867071.1 CDS murE NC_005027.1 3208897 3210969 D PMID: 8436954 best DB hits: BLAST: swissprot:Q03523; MURE_BACSU; E=2e-10 ddbj:BAB06290.1; (AP001515); E=4e-09 swissprot:O86491; MURE_STAAU; E=7e-09 COG: BS_murE; COG0769 UDP-N-acetylmuramyl tripeptide synthase; E=2e-11 XF0794; COG0770 UDP-N-acetylmuramyl pentapeptide synthase; E=1e-09 CPn0418; COG0769 UDP-N-acetylmuramyl tripeptide synthase; E=2e-06 PFAM: PF01225; Mur ligase, catalytic domai; E=0.0033 PF00023; Ank repeat; E=0.019; UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase 3208897..3210969 Rhodopirellula baltica SH 1 1791591 NP_867072.1 CDS RB6119 NC_005027.1 3210993 3211385 D hypothetical protein 3210993..3211385 Rhodopirellula baltica SH 1 1796631 NP_867073.1 CDS tolB NC_005027.1 3211382 3214606 D PMID: 8955385 best DB hits: BLAST: embl:CAB60199.1; (AJ250881) P1a6 protein [Haemonchus contortus]; E=5e-29 gb:AAB01192.1; (U55864) apical gut membrane polyprotein; E=8e-29 pir:T19607; hypothetical protein C31C9.1 - Caenorhabditis elegans; E=8e-27 COG: XF0820; COG2234 Predicted aminopeptidases; E=2e-11 RP302; COG0823 Periplasmic component of the Tol biopolymer transport; E=1e-07 PA0972; COG0823 Periplasmic component of the Tol biopolymer; E=2e-06 PFAM: PF02787; Carbamoyl-phosphate synthetase; E=0.2 PF01546; Peptidase M20/M25/M40; E=0.61 PF00595; PDZ domain (Also known as DHR o; E=0.017; TolB protein 3211382..3214606 Rhodopirellula baltica SH 1 1790668 NP_867074.1 CDS RB6122 NC_005027.1 3214603 3215520 D hypothetical protein 3214603..3215520 Rhodopirellula baltica SH 1 1790826 NP_867075.1 CDS RB6123 NC_005027.1 3215597 3217891 D PMID: 8760355 best DB hits: BLAST: pir:T34092; hypothetical protein C07A12.4 - Caenorhabditis elegans; E=0.071 pir:S71862; protein disulfide-isomerase (EC 5.3.4.1) precursor -; E=0.071 swissprot:P09103; PDI_MOUSE PROTEIN DISULFIDE ISOMERASE PRECURSOR; E=0.079; protein disulfide-isomerase 3215597..3217891 Rhodopirellula baltica SH 1 1789968 NP_867076.1 CDS ribD NC_005027.1 3217792 3219075 D PMID: 9068650 best DB hits: BLAST: pir:T50546; riboflavin bifunctional biosynthesis protein ribG; E=2e-56 swissprot:P50853; RIBD_ACTPL RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBD; E=2e-56 ddbj:BAB05273.1; (AP001512) riboflavin specific; E=9e-52 COG: ribD_1; COG0117 Pyrimidine deaminase; E=1e-28 BH1554_2; COG1985 Pyrimidine reductase, riboflavin biosynthesis; E=6e-21 CPn0871_1; COG0117 Pyrimidine deaminase; E=1e-20 PFAM: PF00383; Cytidine and deoxycytidylate de; E=1.5e-31 PF01872; RibD C-terminal domain; E=4e-33; riboflavin bifunctional biosynthesis protein RibG 3217792..3219075 Rhodopirellula baltica SH 1 1794925 NP_867077.1 CDS RB6127 NC_005027.1 3219093 3223592 R best DB hits: PFAM: PF01842; ACT domain; E=0.55 PF00515; TPR Domain; E=0.051; signal peptide complement(3219093..3223592) Rhodopirellula baltica SH 1 1796627 NP_867078.1 CDS RB6131 NC_005027.1 3223482 3223790 D hypothetical protein 3223482..3223790 Rhodopirellula baltica SH 1 1794199 NP_867079.1 CDS RB6132 NC_005027.1 3223715 3223891 R hypothetical protein complement(3223715..3223891) Rhodopirellula baltica SH 1 1795736 NP_867080.1 CDS purK NC_005027.1 3224012 3225232 R PMID: 3036807 best DB hits: BLAST: swissprot:P12045; PURK_BACSU PHOSPHORIBOSYLAMINOIMIDAZOLE; E=2e-59 embl:CAB45017.1; (AJ242839) phosphoribosylaminoimidazole; E=2e-58 ddbj:BAB04343.1; (AP001509) phosphoribosylaminoimidazole; E=2e-58 COG: BS_purK; COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR; E=2e-60 MJ1486; COG0027 Formate-dependent phosphoribosylglycinamide; E=1e-31 purK; COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR; E=2e-29 PFAM: PF02786; Carbamoyl-phosphate synthase; E=0.027 PF02222; ATP-grasp domain; E=3.7e-22 PF01820; D-ala D-ala ligase; E=0.65; phosphoribosylaminoimidazole carboxylase ATPase subunit complement(3224012..3225232) Rhodopirellula baltica SH 1 1796713 NP_867081.1 CDS purE NC_005027.1 3225229 3225747 R PMID: 3036807 best DB hits: BLAST: swissprot:P12044; PUR6_BACSU PHOSPHORIBOSYLAMINOIMIDAZOLE; E=7e-47 ddbj:BAB04342.1; (AP001509) phosphoribosylaminoimidazole; E=9e-45 swissprot:O06456; PUR6_SULSO PHOSPHORIBOSYLAMINOIMIDAZOLE; E=9e-43 COG: BS_purE; COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; E=7e-48 YOR128c_2; COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR); E=7e-39 VC0052; COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; E=1e-38 PFAM: PF00731; AIR carboxylase; E=1.7e-82; phosphoribosylaminoimidazole carboxylase catalytic subunit (air carboxylase) (airc) complement(3225229..3225747) Rhodopirellula baltica SH 1 1791863 NP_867082.1 CDS RB6137 NC_005027.1 3225751 3226056 R hypothetical protein complement(3225751..3226056) Rhodopirellula baltica SH 1 1796011 NP_867083.1 CDS RB6139 NC_005027.1 3226050 3226613 D PMID: 10484179 best DB hits: BLAST: ddbj:BAB05607.1; (AP001513) BH1888~unknown conserved protein; E=4e-06 swissprot:P54564; YQKA_BACSU HYPOTHETICAL 39.0 KD PROTEIN IN; E=9e-06 pir:C83045; hypothetical protein PA4798 [imported] - Pseudomonas; E=2e-04 COG: BH1888; COG2320 Uncharacterized BCR; E=4e-07; hypothetical protein 3226050..3226613 Rhodopirellula baltica SH 1 1791958 NP_867084.1 CDS RB6141 NC_005027.1 3226679 3227080 D hypothetical protein 3226679..3227080 Rhodopirellula baltica SH 1 1790109 NP_867085.1 CDS tas NC_005027.1 3227094 3228131 R PMID: 10984043 best DB hits: BLAST: pir:B83093; probable oxidoreductase PA4434 [imported] - Pseudomonas; E=4e-54 pir:C82294; oxidoreductase Tas, aldoketo reductase VC0667; E=2e-53 gb:AAG57946.1; AE005512_5 (AE005512) orf, hypothetical protein; E=3e-51 COG: PA4434; COG0667 Predicted oxidoreductases (related to aryl-alcohol; E=4e-55 PFAM: PF00248; Aldo/keto reductase; E=2.5e-29; aldo/keto reductase oxidoreductase TAS complement(3227094..3228131) Rhodopirellula baltica SH 1 1796048 NP_867086.1 CDS RB6144 NC_005027.1 3228189 3228305 R hypothetical protein complement(3228189..3228305) Rhodopirellula baltica SH 1 1792668 NP_867087.1 CDS RB6145 NC_005027.1 3228326 3229294 D PMID: 10984043 best DB hits: BLAST: pir:B83340; hypothetical protein PA2451 [imported] - Pseudomonas; E=9e-10 pir:A75265; ferric enterobactin esterase-related protein -; E=4e-05 swissprot:P10478; XYNZ_CLOTM ENDO-1,4-BETA-XYLANASE Z PRECURSOR; E=0.004 COG: PA2451; COG2382 Enterochelin esterase and related enzymes; E=9e-11; hypothetical protein 3228326..3229294 Rhodopirellula baltica SH 1 1796650 NP_867088.1 CDS aroB NC_005027.1 3229258 3230442 D catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 3229258..3230442 Rhodopirellula baltica SH 1 1793598 NP_867089.1 CDS RB6148 NC_005027.1 3230464 3231369 D best DB hits: BLAST: gb:AAB51777.1; (U69571) ORF993; upstream of trxA gene; E=0.81; hypothetical protein 3230464..3231369 Rhodopirellula baltica SH 1 1790812 NP_867090.1 CDS RB6150 NC_005027.1 3231428 3231595 D hypothetical protein 3231428..3231595 Rhodopirellula baltica SH 1 1791753 NP_867091.1 CDS RB6151 NC_005027.1 3231606 3232352 R PMID: 10978523; hypothetical protein complement(3231606..3232352) Rhodopirellula baltica SH 1 1790319 NP_867092.1 CDS RB6154 NC_005027.1 3232418 3232576 R hypothetical protein complement(3232418..3232576) Rhodopirellula baltica SH 1 1794823 NP_867093.1 CDS RB6155 NC_005027.1 3232485 3232658 R hypothetical protein complement(3232485..3232658) Rhodopirellula baltica SH 1 1792907 NP_867094.1 CDS RB6156 NC_005027.1 3232622 3233026 R hypothetical protein complement(3232622..3233026) Rhodopirellula baltica SH 1 1792485 NP_867095.1 CDS RB6158 NC_005027.1 3233104 3233532 R hypothetical protein complement(3233104..3233532) Rhodopirellula baltica SH 1 1796032 NP_867096.1 CDS RB6160 NC_005027.1 3233585 3233743 D hypothetical protein 3233585..3233743 Rhodopirellula baltica SH 1 1791116 NP_867097.1 CDS RB6162 NC_005027.1 3233881 3234375 R hypothetical protein complement(3233881..3234375) Rhodopirellula baltica SH 1 1793715 NP_867098.1 CDS RB6163 NC_005027.1 3234329 3234799 D hypothetical protein 3234329..3234799 Rhodopirellula baltica SH 1 1792925 NP_867099.1 CDS RB6166 NC_005027.1 3235092 3235940 D PMID: 9163424 best DB hits: BLAST: swissprot:P55632; Y4QK_RHISN INTEGRASERECOMBINASE Y4QK; E=7e-25 swissprot:P55429; Y4EF_RHISN INTEGRASERECOMBINASE Y4EF; E=5e-24 prf:2115270D; integrase [Weeksella zoohelcum]; E=4e-18 COG: PAB0255; COG0582 Integrase; E=1e-15 PFAM: PF00589; Phage integrase; E=2.6e-19; integrase/recombinase 3235092..3235940 Rhodopirellula baltica SH 1 1795578 NP_867100.1 CDS RB6167 NC_005027.1 3235937 3237064 D PMID: 9163424 best DB hits: BLAST: swissprot:P55631; Y4QJ_RHISN TRANSPOSASE Y4QJ -----; E=7e-39 prf:2115270C; transposase [Weeksella zoohelcum]; E=6e-35 pir:S23782; transposase tnpA (insertion sequence IS91) - Escherichia; E=5e-14; transposase 3235937..3237064 Rhodopirellula baltica SH 1 1790873 NP_867101.1 CDS RB6168 NC_005027.1 3236689 3237315 D hypothetical protein 3236689..3237315 Rhodopirellula baltica SH 1 1795651 NP_867102.1 CDS RB6170 NC_005027.1 3237422 3237976 R PMID: 10984043 best DB hits: BLAST: pir:F83333; hypothetical protein PA2504 [imported] - Pseudomonas; E=8e-11 pir:C81172; hypothetical protein NMB0685 [imported] - Neisseria; E=1e-10 pir:B81935; hypothetical protein NMA0887 [imported] - Neisseria; E=3e-10; hypothetical protein complement(3237422..3237976) Rhodopirellula baltica SH 1 1793556 NP_867103.1 CDS RB6171 NC_005027.1 3238048 3239091 R PMID: 9163424 best DB hits: BLAST: swissprot:P55632; Y4QK_RHISN INTEGRASERECOMBINASE Y4QK; E=3e-35 prf:2115270D; integrase [Weeksella zoohelcum]; E=1e-34 swissprot:P55429; Y4EF_RHISN INTEGRASERECOMBINASE Y4EF; E=1e-33 COG: MTH893; COG0582 Integrase; E=9e-29 PFAM: PF00589; Phage integrase; E=4.2e-40; integrase/recombinase complement(3238048..3239091) Rhodopirellula baltica SH 1 1795210 NP_867104.1 CDS RB6172 NC_005027.1 3239311 3239520 R hypothetical protein complement(3239311..3239520) Rhodopirellula baltica SH 1 1790448 NP_867105.1 CDS RB6174 NC_005027.1 3239525 3239734 R hypothetical protein complement(3239525..3239734) Rhodopirellula baltica SH 1 1792283 NP_867106.1 CDS RB6175 NC_005027.1 3239748 3240125 R hypothetical protein complement(3239748..3240125) Rhodopirellula baltica SH 1 1793276 NP_867107.1 CDS RB6178 NC_005027.1 3240162 3240287 D hypothetical protein 3240162..3240287 Rhodopirellula baltica SH 1 1793217 NP_867108.1 CDS RB6180 NC_005027.1 3240284 3240586 D PMID: 12093901 best DB hits: BLAST: gb:AAG19264.1; (AE005022) Vng0801c [Halobacterium sp. NRC-1]; E=0.001 embl:CAC22924.1; (AL512963) hypothetical [Sulfolobus; E=0.005 gb:AAB89210.1; (AE000961) conserved hypothetical protein; E=0.006 COG: APE2154a; COG1826 Sec-independent protein secretion pathway; E=4e-05 PFAM: PF02416; mttA/Hcf106 family; E=6.2e-10; component of Sec-independent protein secretion pathway 3240284..3240586 Rhodopirellula baltica SH 1 1795156 NP_867109.1 CDS RB6184 NC_005027.1 3240588 3240863 D best DB hits: BLAST: gb:AAD31522.1; AF145755_1 (AF145755) THA4 [Zea mays]; E=0.46 PFAM: PF02416; mttA/Hcf106 family; E=1.6e-06; hypothetical protein 3240588..3240863 Rhodopirellula baltica SH 1 1795430 NP_867110.1 CDS RB6185 NC_005027.1 3240869 3244093 R PMID: 10567266 best DB hits: BLAST: pir:F75417; L-sorbosone dehydrogenase - Deinococcus radiodurans; E=0.19 pir:C75617; probable oxidoreductase - Deinococcus radiodurans; E=0.35 embl:CAA53052.1; (X75304) giantin [Homo sapiens]; E=0.78 PFAM: PF00034; Cytochrome c; E=0.017 PF02736; Myosin N-terminal SH3-like domai; E=0.62; L-sorbosone dehydrogenase complement(3240869..3244093) Rhodopirellula baltica SH 1 1796156 NP_867111.1 CDS RB6188 NC_005027.1 3244178 3244384 R hypothetical protein complement(3244178..3244384) Rhodopirellula baltica SH 1 1792138 NP_867112.1 CDS RB6189 NC_005027.1 3244395 3244529 R hypothetical protein complement(3244395..3244529) Rhodopirellula baltica SH 1 1794700 NP_867113.1 CDS RB6190 NC_005027.1 3244532 3245911 R best DB hits: BLAST: embl:CAC24059.1; (AL512981) Hypothetical [Sulfolobus; E=0.17; hypothetical protein complement(3244532..3245911) Rhodopirellula baltica SH 1 1790992 NP_867114.1 CDS RB6193 NC_005027.1 3245908 3246096 R hypothetical protein complement(3245908..3246096) Rhodopirellula baltica SH 1 1793343 NP_867115.1 CDS RB6194 NC_005027.1 3245988 3246119 R hypothetical protein complement(3245988..3246119) Rhodopirellula baltica SH 1 1794259 NP_867116.1 CDS RB6196 NC_005027.1 3246209 3247717 R PMID: 9736747 best DB hits: BLAST: gb:AAC13371.1; (U39940) choline sulfatase [Sinorhizobium; E=4e-30 swissprot:O69787; BETC_RHIME CHOLINE-SULFATASE; E=4e-30 gb:AAA16877.1; (L13329) iduronate-2-sulfatase [Homo sapiens]; E=2e-28 COG: PA0031; COG3119 Arylsulfatase A and related enzymes; E=4e-23 PA0924; COG3083 Predicted hydrolase of alkaline phosphatase; E=0.003 PFAM: PF00884; Sulfatase; E=7.4e-20; choline sulfatase complement(3246209..3247717) Rhodopirellula baltica SH 1 1790006 NP_867117.1 CDS RB6199 NC_005027.1 3247889 3249025 R PMID: 8821935 best DB hits: BLAST: pir:S70672; dehydrogenase homolog - Bordetella pertussis -----; E=5e-50 gb:AAD45293.1; AF156256_1 (AF156256) dehydrogenase; E=3e-44 embl:CAC24056.1; (AL512981) Hypothetical-conserved [Sulfolobus; E=3e-43 COG: TM0585; COG0673 Predicted dehydrogenases and related proteins; E=2e-40 PFAM: PF01958; Domain of unknown function DUF; E=0.00025 PF01408; Oxidoreductase, NAD-bin; E=2.1e-40 PF02894; Oxidoreductase, C-termi; E=1.4e-16; dehydrogenase-like protein complement(3247889..3249025) Rhodopirellula baltica SH 1 1794415 NP_867118.1 CDS mfd NC_005027.1 3248886 3252431 D PMID: 7584024 best DB hits: BLAST: swissprot:P37474; MFD_BACSU TRANSCRIPTION-REPAIR COUPLING FACTOR; E=0.0 gb:AAC98900.1; (AF023181) transcription-repair coupling factor; E=0.0 gb:AAD03810.1; (AF054624) transcription-repair coupling factor; E=1e-179 COG: BS_mfd; COG1197 Transcription-repair coupling factor - superfamily II; E=0.0 TM0205; COG1200 RecG-like helicases; E=4e-69 PFAM: PF00270; DEAD/DEAH box helicase; E=2.7e-27 PF00271; Helicase conserved C-terminal; E=5.3e-18; transcription-repair coupling factor 3248886..3252431 Rhodopirellula baltica SH 1 1791827 NP_867119.1 CDS RB6207 NC_005027.1 3252449 3253759 D PMID: 9389475 best DB hits: BLAST: gb:AAB89850.1; (AE001008) conserved hypothetical protein; E=2e-05 swissprot:P54741; AFSK_STRCO SERINETHREONINE PROTEIN KINASE AFSK; E=0.064 embl:CAB88430.1; (AL353815) serinethreonine protein kinase; E=0.064 COG: AF1399; COG1520 Uncharacterized proteins of WD40-like repeat family; E=2e-06 PFAM: PF01011; PQQ enzyme repeat; E=0.47 PF02316; Mu DNA-binding domain; E=0.84; hypothetical protein 3252449..3253759 Rhodopirellula baltica SH 1 1793277 NP_867120.1 CDS RB6209 NC_005027.1 3253663 3254859 D PMID: 8688087 best DB hits: BLAST: swissprot:Q58250; Y840_METJA HYPOTHETICAL PROTEIN MJ0840 -----; E=3e-29 pir:C69211; conserved hypothetical protein MTH834 - Methanobacterium; E=1e-24 gb:AAB90759.1; (AE001071) conserved hypothetical protein; E=8e-24 COG: MJ0840; COG1548 Predicted nucleotide-binding enzyme; E=2e-30 PFAM: PF00370; FGGY family of carbohydrate kinases,; E=0.78 PF01897; Protein of unknown function DUF66; E=8.5e-35; hypothetical protein 3253663..3254859 Rhodopirellula baltica SH 1 1794348 NP_867121.1 CDS RB6210 NC_005027.1 3254829 3255473 D best DB hits: PFAM: PF00696; Amino acid kinase; E=0.24; hypothetical protein 3254829..3255473 Rhodopirellula baltica SH 1 1795082 NP_867122.1 CDS RB6211 NC_005027.1 3255495 3257693 R PMID: 11474104 best DB hits: BLAST: embl:CAB53476.1; (AJ245900) CAA30373.1 protein [Oryza sativa]; E=0.023 pir:B70126; surface-located membrane protein 1 (lmp1) homolog - Lyme; E=0.091 gb:AAD05531.1; (AF083240) c-type cytochrome precursor [Shewanella; E=0.093 COG: BB0210; COG0457 TPR-repeat-containing proteins; E=0.008 PFAM: PF00515; TPR Domain; E=0.00026; hypothetical protein complement(3255495..3257693) Rhodopirellula baltica SH 1 1796636 NP_867123.1 CDS glyA NC_005027.1 3257871 3259133 D PMID: 9537320 best DB hits: BLAST: swissprot:O66776; GLYA_AQUAE SERINE HYDROXYMETHYLTRANSFERASE; E=1e-135 swissprot:P39148; GLYA_BACSU SERINE HYDROXYMETHYLTRANSFERASE; E=1e-132 ddbj:BAB07484.1; (AP001519) serine hydroxymethyltransferase; E=1e-131 COG: aq_479; COG0112 Glycine hydroxymethyltransferase; E=1e-136 PFAM: PF00464; Serine hydroxymethyltransferase; E=7.9e-234; serine hydroxymethyltransferase (serine methylase SHMT) 3257871..3259133 Rhodopirellula baltica SH 1 1792203 NP_867124.1 CDS RB6217 NC_005027.1 3259199 3259624 D PMID: 10376842 best DB hits: BLAST: gb:AAD28578.1; AF121341_2 (AF121341) response regulator; E=7e-27 gb:AAA87378.1; (L42554) pleD gene product [Caulobacter; E=3e-21 pir:S74913; sensory transduction system regulatory protein slr1400 -; E=4e-21 COG: slr1400_1; COG0784 CheY-like receiver domains; E=4e-20 slr0115; COG0745 Response regulators consisting of a CheY-like; E=2e-19 VC0622_4; COG0784 CheY-like receiver domains; E=4e-19 PFAM: PF00072; Response regulator receiver doma; E=3.1e-37; response regulator 3259199..3259624 Rhodopirellula baltica SH 1 1794999 NP_867125.1 CDS RB6218 NC_005027.1 3259575 3259775 D hypothetical protein 3259575..3259775 Rhodopirellula baltica SH 1 1791684 NP_867126.1 CDS RB6220 NC_005027.1 3259826 3260908 D hypothetical protein 3259826..3260908 Rhodopirellula baltica SH 1 1792492 NP_867127.1 CDS RB6221 NC_005027.1 3260995 3264012 R PMID: 11759840; signal peptide complement(3260995..3264012) Rhodopirellula baltica SH 1 1792011 NP_867128.1 CDS RB6225 NC_005027.1 3264080 3264211 R hypothetical protein complement(3264080..3264211) Rhodopirellula baltica SH 1 1790003 NP_867129.1 CDS RB6226 NC_005027.1 3264248 3265393 R PMID: 10984043 best DB hits: BLAST: pir:D83026; conserved hypothetical protein PA4950 [imported] -; E=4e-52 swissprot:P39288; YJES_ECOLI HYPOTHETICAL 43.1 KD PROTEIN IN; E=1e-48 gb:AAG59362.1; AE005650_1 (AE005650) orf, hypothetical protein; E=2e-48 COG: PA4950; COG1600 Uncharacterized Fe-S protein; E=4e-53 PFAM: PF00037; 4Fe-4S binding domain; E=0.026; (Fe-S)-binding protein complement(3264248..3265393) Rhodopirellula baltica SH 1 1793068 NP_867130.1 CDS RB6227 NC_005027.1 3265390 3267153 R best DB hits: BLAST: pir:T37039; hypothetical protein SCJ12.22 - Streptomyces coelicolor; E=6e-05 swissprot:P39066; ACUB_BACSU ACETOIN UTILIZATION ACUB PROTEIN; E=0.016 pir:T36952; conserved hypothetical protein SCJ1.19c - Streptomyces; E=0.021 COG: BS_acuB; COG0517 CBS domains; E=0.002 PFAM: PF00999; Sodium/hydrogen exchanger fami; E=0.024 PF00571; CBS domain; E=0.00084; hypothetical protein complement(3265390..3267153) Rhodopirellula baltica SH 1 1795052 NP_867131.1 CDS RB6230 NC_005027.1 3267331 3269295 R best DB hits: BLAST: ddbj:BAA89783.1; (AB037133) IRE [Arabidopsis thaliana] -----; E=0.25; IRE (iron responsive element) complement(3267331..3269295) Rhodopirellula baltica SH 1 1795419 NP_867132.1 CDS RB6233 NC_005027.1 3269292 3271181 R hypothetical protein complement(3269292..3271181) Rhodopirellula baltica SH 1 1795230 NP_867133.1 CDS RB6236 NC_005027.1 3271178 3272203 R PMID: 8590279 best DB hits: BLAST: swissprot:P22040; Y415_SYNY3 HYPOTHETICAL ABC TRANSPORTER; E=8e-56 gb:AAC36155.1; (AF003632) PilH [Myxococcus xanthus]; E=1e-48 pir:A39025; probable membrane protein, cpn60 5'-region -; E=7e-47 COG: sll0415; COG1131 ABC-type multidrug transport system, ATPase; E=7e-57 PFAM: PF00005; ABC transporter; E=1.4e-59; ABC transporter ATP-binding protein complement(3271178..3272203) Rhodopirellula baltica SH 1 1791436 NP_867134.1 CDS folC NC_005027.1 3272353 3273984 D PMID: 10360571 best DB hits: BLAST: pir:D72411; folylpolyglutamate synthasedihydrofolate synthase -; E=4e-40 ddbj:BAB06756.1; (AP001517) folyl-polyglutamate synthetase; E=8e-39 swissprot:Q05865; FOLC_BACSU FOLYLPOLYGLUTAMATE SYNTHASE; E=8e-38 COG: TM0166; COG0285 Folylpolyglutamate synthase; E=4e-41 PFAM: PF01225; Mur ligase, catalytic dom; E=1.6e-13 PF02875; Mur ligase, glutamate lig; E=0.00031; folylpolyglutamate synthase/dihydrofolate synthase 3272353..3273984 Rhodopirellula baltica SH 1 1790211 NP_867135.1 CDS RB6238 NC_005027.1 3273915 3275111 R PMID: 10952301 best DB hits: BLAST: pir:F82343; conserved hypothetical protein VC0271 [imported] -; E=3e-57 swissprot:P74078; YC54_SYNY3 HYPOTHETICAL 38.3 KD PROTEIN SLL1254; E=9e-39 gb:AAG20419.1; (AE005114) hemolysin protein; Hlp [Halobacterium; E=8e-17 COG: VC0271; COG1253 Uncharacterized CBS domain-containing proteins; E=3e-58 PFAM: PF01595; Domain of unknown function DUF21; E=2.1e-20 PF00571; CBS domain; E=0.0002; hypothetical protein complement(3273915..3275111) Rhodopirellula baltica SH 1 1792066 NP_867136.1 CDS RB6239 NC_005027.1 3275123 3275302 R hypothetical protein complement(3275123..3275302) Rhodopirellula baltica SH 1 1792249 NP_867137.1 CDS fabG NC_005027.1 3275350 3276192 D PMID: 10484179 best DB hits: BLAST: ddbj:BAB06210.1; (AP001515) 3-oxoacyl-(acyl-carrier protein); E=1e-17 pir:H75014; 3-oxoacyl-[acyl-carrier-protein] reductase PAB1085 -; E=3e-16 gb:AAK04872.1; AE006311_3 (AE006311) 3-oxoacyl-acyl carrier; E=9e-14 COG: BH2491; COG1028 Dehydrogenases with different specificities (related; E=1e-18 PAB1085; COG1028 Dehydrogenases with different specificities; E=3e-17 DR1943; COG1028 Dehydrogenases with different specificities (related; E=2e-13 PFAM: PF00106; short chain dehydrogenase; E=4.2e-11 PF00678; Short chain dehydrogenase/reduct; E=1.3e-06; 3-oxoacyl-ACP reductase 3275350..3276192 Rhodopirellula baltica SH 1 1795888 NP_867138.1 CDS RB6241 NC_005027.1 3276131 3277327 R PMID: 10484179 best DB hits: BLAST: ddbj:BAB06407.1; (AP001516); E=4e-06 pir:G70961; probable hexosyltransferase (EC 2.4.1.-) Rv0225; E=2e-04 gb:AAF14309.1; (U45308) SqdX [Synechococcus sp. PCC 7942]; E=4e-04 COG: BH2688; COG0438 Predicted glycosyltransferases; E=3e-07 PFAM: PF00534; Glycosyl transferases group 1; E=4.6e-08; hexosyltransferase complement(3276131..3277327) Rhodopirellula baltica SH 1 1793895 NP_867139.1 CDS RB6242 NC_005027.1 3277324 3278667 R hypothetical protein complement(3277324..3278667) Rhodopirellula baltica SH 1 1793855 NP_867140.1 CDS RB6243 NC_005027.1 3278647 3278907 D hypothetical protein 3278647..3278907 Rhodopirellula baltica SH 1 1790798 NP_867141.1 CDS RB6244 NC_005027.1 3278695 3278979 R hypothetical protein complement(3278695..3278979) Rhodopirellula baltica SH 1 1794887 NP_867142.1 CDS RB6245 NC_005027.1 3278762 3279085 D hypothetical protein 3278762..3279085 Rhodopirellula baltica SH 1 1790503 NP_867143.1 CDS serC NC_005027.1 3279082 3280233 D catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 3279082..3280233 Rhodopirellula baltica SH 1 1792192 NP_867144.1 CDS serA NC_005027.1 3280282 3281904 D catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 3280282..3281904 Rhodopirellula baltica SH 1 1791083 NP_867145.1 CDS RB6250 NC_005027.1 3282079 3282186 D hypothetical protein 3282079..3282186 Rhodopirellula baltica SH 1 1795078 NP_867146.1 CDS RB6251 NC_005027.1 3282200 3284317 R hypothetical protein complement(3282200..3284317) Rhodopirellula baltica SH 1 1794321 NP_867147.1 CDS manC NC_005027.1 3284503 3285573 R PMID: 10567266 best DB hits: BLAST: pir:B75596; mannose-1-phosphate guanylyltransferase - Deinococcus; E=5e-67 pir:S75700; GDP-mannose pyrophosphorylase - Synechocystis sp.; E=9e-59 ddbj:BAB03201.1; (AB046360) GOP-mannose phosphorylase; E=2e-52 COG: DRA0032; COG0836 Mannose-1-phosphate guanylyltransferase; E=5e-68 PFAM: PF01128; Uncharacterized protein famil; E=0.27 PF00483; Nucleotidyl transferase; E=1.8e-54 PF01050; Mannose-6-phosphate isomerase; E=3.3e-05; mannose-1-phosphate guanylyltransferase complement(3284503..3285573) Rhodopirellula baltica SH 1 1792764 NP_867148.1 CDS RB6255 NC_005027.1 3285625 3287961 R best DB hits: BLAST: gb:AAD05534.1; (AF083240) deca-heme c-type cytochrome [Shewanella; E=4e-04 gb:AAD05531.1; (AF083240) c-type cytochrome precursor [Shewanella; E=4e-04 swissprot:P32707; NRFB_ECOLI CYTOCHROME C-TYPE PROTEIN NRFB; E=0.029 COG: MTH83; COG0457 TPR-repeat-containing proteins; E=0.007 PFAM: PF00515; TPR Domain; E=0.014; deca-heme c-type cytochrome complement(3285625..3287961) Rhodopirellula baltica SH 1 1793456 NP_867149.1 CDS RB6257 NC_005027.1 3288043 3288666 R hypothetical protein complement(3288043..3288666) Rhodopirellula baltica SH 1 1792023 NP_867150.1 CDS tolQ NC_005027.1 3288663 3289493 R PMID: 10984043 best DB hits: BLAST: pir:G83274; probable tolQ-type transport protein PA2983 [imported] -; E=1e-15 pir:D82726; conserved hypothetical protein XF1079 [imported] -; E=4e-10 gb:AAC69453.1; (AF047974) TolR [Vibrio cholerae]; E=1e-09 COG: PA2983; COG0811 Biopolymer transport proteins; E=1e-16 PFAM: PF01618; MotA/TolQ/ExbB proton channel famil; E=1.9e-20; TolQ-type transport protein complement(3288663..3289493) Rhodopirellula baltica SH 1 1792087 NP_867151.1 CDS RB6263 NC_005027.1 3289490 3291310 R hypothetical protein complement(3289490..3291310) Rhodopirellula baltica SH 1 1796204 NP_867152.1 CDS RB6266 NC_005027.1 3291307 3293502 R hypothetical protein complement(3291307..3293502) Rhodopirellula baltica SH 1 1791872 NP_867153.1 CDS galE NC_005027.1 3293581 3294798 R PMID: 11058132 best DB hits: BLAST: swissprot:Q9KDV3; GALE_BACHD UDP-GLUCOSE 4-EPIMERASE; E=9e-99 pir:A69184; UDP-glucose 4-epimerase - Methanobacterium; E=3e-98 gb:AAK06077.1; AE006428_1 (AE006428) UDP-glucose 4-epimerase (EC; E=2e-93 COG: BH1108; COG1087 UDP-glucose 4-epimerase; E=1e-100 TM0509; COG0451 Nucleoside-diphosphate-sugar epimerases; E=9e-41 MPN257; COG1087 UDP-glucose 4-epimerase; E=6e-38 PFAM: PF02716; Isoflavone reductase; E=0.13 PF02254; KTN NAD-binding domain; E=0.22 PF00984; UDP-glucose/GDP-mannose dehyd; E=0.0085; UDP-glucose 4-epimerase complement(3293581..3294798) Rhodopirellula baltica SH 1 1791651 NP_867154.1 CDS RB6271 NC_005027.1 3294814 3295791 D PMID: 10484179 best DB hits: BLAST: ddbj:BAB05248.1; (AP001512) integraserecombinase [Bacillus; E=1e-56 swissprot:P46352; RIPX_BACSU PROBABLE INTEGRASERECOMBINASE RIPX; E=1e-54 pir:A82080; integraserecombinase XerD VC2419 [imported] - Vibrio; E=5e-53 COG: BH1529; COG0582 Integrase; E=1e-57 PFAM: PF02899; Phage integrase, N-terminal S; E=1.8e-20 PF00589; Phage integrase; E=1.6e-50; integrase/recombinase 3294814..3295791 Rhodopirellula baltica SH 1 1793810 NP_867155.2 CDS fabH NC_005027.1 3295807 3296844 R FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase complement(3295807..3296844) Rhodopirellula baltica SH 1 1792472 NP_867156.1 CDS RB6274 NC_005027.1 3296951 3297130 R hypothetical protein complement(3296951..3297130) Rhodopirellula baltica SH 1 1795203 NP_867157.1 CDS hup NC_005027.1 3297187 3297504 R PMID: 10910347 best DB hits: BLAST: pir:D82620; histone-like protein XF1943 [imported] - Xylella; E=4e-14 pir:JC6029; histone H1 homolog - Bordetella pertussis ----- gb:; E=4e-13 ddbj:BAB05028.1; (AP001511) non-specific DNA-binding protein II; E=3e-05 COG: BH1309; COG0776 Bacterial nucleoid DNA-binding protein; E=3e-06 PFAM: PF00216; Bacterial DNA-binding protein; E=7.4e-07; DNA-binding protein HU complement(3297187..3297504) Rhodopirellula baltica SH 1 1793535 NP_867158.1 CDS RB6278 NC_005027.1 3297678 3302303 R PMID: 7584044 best DB hits: BLAST: ddbj:BAA07555.1; (D38552) The ha1539 protein is related to; E=1e-19 gb:AAF58019.1; (AE003807) CG7747 gene product [Drosophila; E=2e-18 pir:T48940; hypothetical protein F14L2.150 - Arabidopsis thaliana; E=4e-18 COG: VNG1914G; COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) -; E=3e-15 PFAM: PF00160; Cyclophilin type peptidyl-prol; E=6.4e-32; cyclophilin type peptidyl-prolyl cis-trans isomerase complement(3297678..3302303) Rhodopirellula baltica SH 1 1796639 NP_867159.1 CDS RB6281 NC_005027.1 3302547 3302903 D hypothetical protein 3302547..3302903 Rhodopirellula baltica SH 1 1790846 NP_867160.1 CDS RB6282 NC_005027.1 3302795 3303397 D hypothetical protein 3302795..3303397 Rhodopirellula baltica SH 1 1792329 NP_867161.1 CDS RB6283 NC_005027.1 3303404 3303589 R hypothetical protein complement(3303404..3303589) Rhodopirellula baltica SH 1 1793450 NP_867162.1 CDS sahH NC_005027.1 3303599 3304945 R catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase complement(3303599..3304945) Rhodopirellula baltica SH 1 1794833 NP_867163.1 CDS RB6286 NC_005027.1 3304962 3305303 D hypothetical protein 3304962..3305303 Rhodopirellula baltica SH 1 1794863 NP_867164.1 CDS RB6288 NC_005027.1 3305300 3307852 D signal peptide 3305300..3307852 Rhodopirellula baltica SH 1 1791290 NP_867165.1 CDS RB6289 NC_005027.1 3307849 3308577 R best DB hits: BLAST: pir:T45716; hypothetical protein F1P2.110 - Arabidopsis thaliana; E=4e-07 gb:AAG10612.1; AC008030_12 (AC008030) Unknown protein [Arabidopsis; E=1e-05 gb:AAD10154.1; (AC005917) esterase [Arabidopsis; E=1e-05 COG: XF1829; COG2945 Predicted hydrolase of the alpha/beta superfamily; E=6e-06 CT149; COG1073 Hydrolases of the alpha/beta superfamily; E=0.008 PFAM: PF00561; alpha/beta hydrolase fold; E=0.0058 PF00293; MutT-like domain; E=0.7; hydrolase complement(3307849..3308577) Rhodopirellula baltica SH 1 1795241 NP_867166.1 CDS RB6291 NC_005027.1 3308706 3309743 R PMID: 10484179 best DB hits: BLAST: swissprot:P54466; YQFA_BACSU HYPOTHETICAL 35.6 KD PROTEIN IN; E=7e-57 embl:CAA12151.1; (AJ224829) ORF1 [Bacillus megaterium]; E=2e-54 ddbj:BAB05076.1; (AP001511) BH1357~unknown conserved protein in; E=3e-54; hypothetical protein complement(3308706..3309743) Rhodopirellula baltica SH 1 1795316 NP_867167.1 CDS RB6292 NC_005027.1 3309876 3310694 R PMID: 8688087 best DB hits: BLAST: swissprot:Q58114; Y703_METJA HYPOTHETICAL PROTEIN MJ0703 -----; E=9e-14 gb:AAG32955.1; (AF032114) unknown [Methylobacterium extorquens]; E=6e-07 pir:A69189; phosphoribosylformimino-5-aminoimidazole carboxamide; E=4e-05 COG: MJ0703; COG1411 Archaeal family of HisA paralogs; E=9e-15; hypothetical protein complement(3309876..3310694) Rhodopirellula baltica SH 1 1794601 NP_867168.1 CDS RB6296 NC_005027.1 3310691 3311119 R hypothetical protein complement(3310691..3311119) Rhodopirellula baltica SH 1 1795823 NP_867169.1 CDS RB6298 NC_005027.1 3311120 3311431 D hypothetical protein 3311120..3311431 Rhodopirellula baltica SH 1 1791021 NP_867170.1 CDS trpG NC_005027.1 3311474 3312100 D best DB hits: BLAST: swissprot:P20576; TRPG_PSEAE ANTHRANILATE SYNTHASE COMPONENT II; E=1e-60 pir:A35114; trpG protein - Pseudomonas aeruginosa ----- gb:; E=1e-60 pir:NNPS2P; anthranilate synthase (EC 4.1.3.27) component II; E=2e-59 COG: PA0649; COG0512 Anthranilate/para-aminobenzoate synthases component; E=1e-61 pabA; COG0512 Anthranilate/para-aminobenzoate synthases component II; E=3e-56 BS_pabA; COG0512 Anthranilate/para-aminobenzoate synthases component; E=2e-55 PFAM: PF00117; Glutamine amidotransferase class-I; E=2.5e-68; anthranilate synthase component II (glutamine amido-transferase) 3311474..3312100 Rhodopirellula baltica SH 1 1794187 NP_867171.1 CDS RB6302 NC_005027.1 3312186 3312701 R PMID: 10360571 best DB hits: BLAST: pir:H72286; conserved hypothetical protein - Thermotoga maritima; E=5e-22 swissprot:P54570; ADPP_BACSU ADP-RIBOSE PYROPHOSPHATASE; E=3e-21 ddbj:BAB05243.1; (AP001512) BH1524~unknown conserved protein; E=3e-19 COG: TM1181; COG0494 NTP pyrophosphohydrolases including oxidative damage; E=5e-23 BS_yqkG; COG0494 NTP pyrophosphohydrolases including oxidative; E=3e-22 BH1524; COG0494 NTP pyrophosphohydrolases including oxidative damage; E=3e-20 PFAM: PF00293; MutT-like domain; E=3.7e-13; ADP-ribose pyrophosphatase complement(3312186..3312701) Rhodopirellula baltica SH 1 1792431 NP_867172.1 CDS RB6304 NC_005027.1 3312700 3312900 D hypothetical protein 3312700..3312900 Rhodopirellula baltica SH 1 1794479 NP_867173.1 CDS RB6305 NC_005027.1 3312842 3314155 D PMID: 9537320 best DB hits: BLAST: pir:G70463; dolichol-phosphate mannosyltransferase - Aquifex; E=3e-52 pir:D83201; probable glycosyl transferase PA3553 [imported] -; E=3e-37 gb:AAG57385.1; AE005458_2 (AE005458) sugar transferase; E=2e-36 COG: aq_1899; COG0463 Glycosyltransferases involved in cell wall; E=3e-53 yfbF; COG0463 Glycosyltransferases involved in cell wall biogenesis; E=3e-37 sll0501; COG0463 Glycosyltransferases involved in cell wall; E=1e-23 PFAM: PF00535; Glycosyl transferase; E=1.1e-24; dolichol-phosphate mannosyltransferase 3312842..3314155 Rhodopirellula baltica SH 1 1793273 NP_867174.1 CDS RB6307 NC_005027.1 3314118 3315779 D hypothetical protein 3314118..3315779 Rhodopirellula baltica SH 1 1792898 NP_867175.1 CDS RB6310 NC_005027.1 3315801 3319265 D hypothetical protein 3315801..3319265 Rhodopirellula baltica SH 1 1793919 NP_867176.1 CDS RB6314 NC_005027.1 3319320 3319478 D hypothetical protein 3319320..3319478 Rhodopirellula baltica SH 1 1792772 NP_867177.1 CDS RB6315 NC_005027.1 3319455 3320228 R PMID: 8264528 best DB hits: BLAST: gb:AAK00179.1; AF222754_7 (AF222754) probable nodulation protein; E=5e-08 pir:S39902; nwsB protein - Bradyrhizobium japonicum ----- embl:; E=5e-07 prf:2009374B; NwsB protein [Bradyrhizobium japonicum]; E=5e-07 COG: PA4196; COG2197 Response regulators consisting of a CheY-like; E=1e-05 PFAM: PF01726; LexA DNA binding domain; E=0.74 PF00196; Bacterial regulatory proteins,; E=1.4e-12; response-regulator complement(3319455..3320228) Rhodopirellula baltica SH 1 1792015 NP_867178.1 CDS RB6319 NC_005027.1 3320303 3320536 R hypothetical protein complement(3320303..3320536) Rhodopirellula baltica SH 1 1794071 NP_867179.1 CDS RB6320 NC_005027.1 3320376 3320570 D hypothetical protein 3320376..3320570 Rhodopirellula baltica SH 1 1794349 NP_867180.1 CDS RB6322 NC_005027.1 3320563 3320790 D hypothetical protein 3320563..3320790 Rhodopirellula baltica SH 1 1795093 NP_867181.1 CDS RB6323 NC_005027.1 3320754 3320930 D hypothetical protein 3320754..3320930 Rhodopirellula baltica SH 1 1794722 NP_867182.1 CDS RB6324 NC_005027.1 3321074 3321442 R hypothetical protein complement(3321074..3321442) Rhodopirellula baltica SH 1 1792029 NP_867183.1 CDS RB6325 NC_005027.1 3321473 3321688 R hypothetical protein complement(3321473..3321688) Rhodopirellula baltica SH 1 1791364 NP_867184.1 CDS RB6327 NC_005027.1 3321757 3322500 D PMID: 10617197 best DB hits: BLAST: ddbj:BAA98195.1; (AP002030) short chain alcohol; E=7e-21 gb:AAC95219.1; (AC004561) tropinone reductase; E=5e-20 gb:AAC95202.1; (AC004561) tropinone reductase; E=1e-19 COG: TM1724; COG1028 Dehydrogenases with different specificities (related; E=4e-19 VNG1341G; COG1028 Dehydrogenases with different specificities; E=2e-16 TM0441; COG1028 Dehydrogenases with different specificities (related; E=1e-15 PFAM: PF00899; ThiF family; E=0.21 PF02254; KTN NAD-binding domain; E=0.066 PF00106; short chain dehydrogenase; E=3.9e-28; short chain alcohol dehydrogenase-like 3321757..3322500 Rhodopirellula baltica SH 1 1794507 NP_867185.1 CDS RB6328 NC_005027.1 3322486 3323052 R PMID: 9371463 best DB hits: BLAST: pir:F69084; conserved hypothetical protein MTH1629 -; E=1e-20 pir:C71193; hypothetical protein PH1819 - Pyrococcus horikoshii; E=8e-18 swissprot:Q57692; Y240_METJA HYPOTHETICAL PROTEIN MJ0240 -----; E=1e-17 COG: MTH1629; COG1437 Adenylate cyclase, class 2 (thermophilic); E=1e-21 PFAM: PF01928; Adenylate cyclase; E=2.9e-45; adenylyl cyclase complement(3322486..3323052) Rhodopirellula baltica SH 1 1794197 NP_867186.1 CDS RB6330 NC_005027.1 3323121 3324008 R PMID: 8843436 best DB hits: BLAST: embl:CAC08313.1; (AL392149) integral membrane protein; E=8e-05; hypothetical protein complement(3323121..3324008) Rhodopirellula baltica SH 1 1795022 NP_867187.1 CDS thiE NC_005027.1 3324024 3325151 R catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate; thiamine-phosphate pyrophosphorylase complement(3324024..3325151) Rhodopirellula baltica SH 1 1792452 NP_867188.1 CDS RB6332 NC_005027.1 3325222 3325974 D PMID: 9628582 best DB hits: BLAST: ddbj:BAB10862.1; (AB009053) contains similarity to isoamyl; E=0.074; hypothetical protein 3325222..3325974 Rhodopirellula baltica SH 1 1795964 NP_867189.1 CDS RB6333 NC_005027.1 3325971 3326081 D hypothetical protein 3325971..3326081 Rhodopirellula baltica SH 1 1795481 NP_867190.1 CDS RB6334 NC_005027.1 3326078 3326341 R hypothetical protein complement(3326078..3326341) Rhodopirellula baltica SH 1 1795225 NP_867191.1 CDS RB6336 NC_005027.1 3326340 3326609 D hypothetical protein 3326340..3326609 Rhodopirellula baltica SH 1 1790504 NP_867192.1 CDS RB6337 NC_005027.1 3326683 3327696 R PMID: 10567266 best DB hits: BLAST: pir:H75377; conserved hypothetical protein - Deinococcus radiodurans; E=1e-11 pir:S76965; hypothetical protein - Synechocystis sp. (strain PCC; E=2e-08; hypothetical protein complement(3326683..3327696) Rhodopirellula baltica SH 1 1793700 NP_867193.1 CDS RB6339 NC_005027.1 3327638 3328528 R PMID: 8590279 best DB hits: BLAST: pir:S75891; hypothetical protein slr1174 - Synechocystis sp. (strain; E=9e-06 pir:E75548; conserved hypothetical protein - Deinococcus radiodurans; E=0.011 COG: slr1174; COG0842 Permease component of an ABC-transporter; E=8e-07; hypothetical protein complement(3327638..3328528) Rhodopirellula baltica SH 1 1796987 NP_867194.1 CDS RB6340 NC_005027.1 3328447 3328977 R hypothetical protein complement(3328447..3328977) Rhodopirellula baltica SH 1 1794747 NP_867195.1 CDS RB6342 NC_005027.1 3328977 3329153 R hypothetical protein complement(3328977..3329153) Rhodopirellula baltica SH 1 1791464 NP_867196.1 CDS dnaG NC_005027.1 3329190 3331400 D PMID: 10484179 best DB hits: BLAST: ddbj:BAB05094.1; (AP001511) DNA primase [Bacillus halodurans]; E=1e-55 swissprot:P05096; PRIM_BACSU DNA PRIMASE ----- pir: A22282 DNA; E=3e-54 swissprot:P74893; PRIM_SYNP7 DNA PRIMASE ----- pir: T11850 DNA; E=5e-54 COG: BH1375; COG0358 DNA primase (bacterial type); E=1e-56 PFAM: PF01807; CHC2 zinc finger; E=5.1e-26 PF01751; Toprim domain; E=3.1e-11; DNA primase 3329190..3331400 Rhodopirellula baltica SH 1 1794509 NP_867197.1 CDS RB6347 NC_005027.1 3331611 3333314 D PMID: 8188604 best DB hits: BLAST: pir:I40872; transcription initiation factor sigma 70 - Chlamydophila; E=1e-78 swissprot:Q9Z7F0; RPSD_CHLPN RNA POLYMERASE SIGMA FACTOR RPOD; E=9e-77 pir:E81502; RNA polymerase sigma factor, sigma-70 family CP1116; E=2e-76 COG: CPn0756; COG0568 DNA-directed RNA polymerase sigma subunits; E=8e-78 PFAM: PF00140; Sigma-70 factor; E=3.5e-109; transcription initiation factor sigma 70 3331611..3333314 Rhodopirellula baltica SH 1 1791537 NP_867198.1 CDS RB6349 NC_005027.1 3333462 3333602 D hypothetical protein 3333462..3333602 Rhodopirellula baltica SH 1 1795621 NP_867199.1 CDS RB6350 NC_005027.1 3333612 3336110 D CcoN/CcoO FixN/FixO; bifunctional cbb3-type cytochrome c oxidase subunit I/II 3333612..3336110 Rhodopirellula baltica SH 1 1790603 NP_867200.1 CDS RB6351 NC_005027.1 3336171 3336347 D hypothetical protein 3336171..3336347 Rhodopirellula baltica SH 1 1792017 NP_867201.1 CDS RB6353 NC_005027.1 3336344 3336961 D PMID: 10952301 best DB hits: BLAST: pir:C82200; cytochrome c oxidase, chain CcoP VC1439 [similarity] -; E=7e-15 gb:AAB02559.1; (U58092) cbb3-type cytochrome c oxidase CcoP; E=1e-13 pir:A83452; probable cytochrome c PA1552 [imported] - Pseudomonas; E=1e-13 COG: VC1439; COG2010 Cytochrome c, mono- and diheme variants; E=7e-16 PFAM: PF00034; Cytochrome c; E=4.2e-11; cytochrome c oxidase (chain III, cbb3-type) 3336344..3336961 Rhodopirellula baltica SH 1 1790052 NP_867202.1 CDS RB6355 NC_005027.1 3336973 3338490 D PMID: 10984043 best DB hits: BLAST: pir:D83130; probable iron-sulfur protein PA4131 [imported] -; E=7e-48 pir:G82371; FixG-related protein VC0036 [imported] - Vibrio cholerae; E=1e-45 pir:G81081; ferredoxin, 4Fe-4S bacterial type NMB1454 [imported] -; E=2e-45 COG: PA4131; COG0348 Polyferredoxin; E=6e-49 PFAM: PF00037; 4Fe-4S binding domain; E=0.27; iron-sulfur protein 3336973..3338490 Rhodopirellula baltica SH 1 1794052 NP_867203.1 CDS RB6356 NC_005027.1 3338493 3339026 D PMID: 8661920 best DB hits: BLAST: embl:CAA64888.1; (X95634) fixH [Bradyrhizobium japonicum] -----; E=0.18; nitrogen fixation protein fixH 3338493..3339026 Rhodopirellula baltica SH 1 1792143 NP_867204.1 CDS RB6357 NC_005027.1 3339028 3339849 D PMID: 10710307 best DB hits: BLAST: pir:D81161; conserved hypothetical protein NMB0759 [imported] -; E=2e-10 pir:A81944; hypothetical protein NMA0970 [imported] - Neisseria; E=9e-10 pir:G82199; conserved hypothetical protein VC1435 [imported] -; E=8e-06 COG: NMB0759; COG2836 Uncharacterized BCR; E=2e-11; hypothetical protein 3339028..3339849 Rhodopirellula baltica SH 1 1792971 NP_867205.1 CDS RB6360 NC_005027.1 3339859 3342360 D PMID: 10984043 best DB hits: BLAST: pir:F83451; probable cation-transporting P-type ATPase PA1549; E=2e-85 pir:A82200; cation transport ATPase, E1-E2 family VC1437 [imported]; E=3e-77 pir:D81129; cation transport ATPase, E1-E2 family NMB1042 [imported]; E=6e-74 COG: PA1549; COG2217 Cation transport ATPases; E=2e-86 PFAM: PF00403; Heavy-metal-associated domain; E=5.3e-08 PF00122; E1-E2 ATPase; E=4.1e-72 PF00702; haloacid dehalogenase-like hydro; E=2.6e-22; cation-transporting P-type ATPase 3339859..3342360 Rhodopirellula baltica SH 1 1795466 NP_867206.1 CDS RB6363 NC_005027.1 3342357 3342566 D PMID: 10984043 best DB hits: BLAST: pir:E83451; conserved hypothetical protein PA1548 [imported] -; E=0.036 embl:CAA64890.1; (X95634) fixS [Bradyrhizobium japonicum]; E=0.30 pir:C81074; fixS protein NMB1516 [imported] - Neisseria; E=0.62 COG: PA1548; COG3197 Uncharacterized protein, possibly involved in; E=0.003; nitrogen fixation protein fixS 3342357..3342566 Rhodopirellula baltica SH 1 1791615 NP_867207.1 CDS RB6364 NC_005027.1 3342586 3343374 D PMID: 10684935 best DB hits: BLAST: pir:E81578; conserved hypothetical protein CP0417 [imported] -; E=8e-13 pir:C71559; probable outer membrane leader peptide CT073 - Chlamydia; E=9e-13 pir:A81713; conserved hypothetical protein TC0345 [imported] -; E=2e-12; ATP/GTP-binding protein 3342586..3343374 Rhodopirellula baltica SH 1 1795177 NP_867208.1 CDS RB6365 NC_005027.1 3343390 3344547 R PMID: 10731132 best DB hits: BLAST: gb:AAF53305.1; (AE003640) CG16956 gene product [Drosophila; E=0.88; hypothetical protein complement(3343390..3344547) Rhodopirellula baltica SH 1 1791338 NP_867209.1 CDS RB6369 NC_005027.1 3344826 3345236 D best DB hits: BLAST: gb:AAC69888.1; (AF098788) nuclear calmodulin-binding protein; E=0.13; nuclear calmodulin-binding protein 3344826..3345236 Rhodopirellula baltica SH 1 1793270 NP_867210.1 CDS hydG NC_005027.1 3345223 3346725 D PMID: 1756170 best DB hits: BLAST: gb:AAF33506.1; (AF170176) Salmonella typhimurium transcriptional; E=3e-12 gb:AAG59807.1; AF305914_2 (AF305914) HydG [Klebsiella oxytoca]; E=3e-12 swissprot:P25852; HYDG_SALTY transcriptional regulator; E=4e-12 COG: hydG; COG2204 AAA superfamily ATPases with N-terminal receiver; E=2e-12 BS_yqiR_2; COG1221 NtrC family transcriptional regulators, ATPase; E=4e-08 glnG; COG2204 AAA superfamily ATPases with N-terminal receiver; E=1e-07 PFAM: PF00158; Sigma-54 interaction domain; E=2e-05; hydrogenase regulatory protein HydG 3345223..3346725 Rhodopirellula baltica SH 1 1793433 NP_867211.1 CDS RB6372 NC_005027.1 3346722 3347120 D hypothetical protein 3346722..3347120 Rhodopirellula baltica SH 1 1794974 NP_867212.1 CDS trmE NC_005027.1 3347077 3348357 D PMID: 1552862 best DB hits: BLAST: swissprot:P25811; THDF_BACSU POSSIBLE THIOPHENE AND FURAN; E=7e-21 gb:AAK06340.1; AE006453_4 (AE006453) GTP-binding protein ThdF; E=3e-20 embl:CAA71458.1; (Y10436) orf452; translated orf similarity to; E=2e-17 COG: BS_thdF; COG0486 Predicted GTPase; E=7e-22 DR2308; COG1160 Predicted GTPases; E=8e-12 TP0550; COG0486 Predicted GTPase; E=1e-11 PFAM: PF00071; Ras family; E=0.77 PF02421; Ferrous iron transport protein B; E=1.3e-05 PF01926; GTPase of unknown function; E=1e-06; tRNA modification GTPase 3347077..3348357 Rhodopirellula baltica SH 1 1791468 NP_867213.1 CDS RB6374 NC_005027.1 3348288 3349616 D best DB hits: BLAST: pir:T35587; hypothetical protein SC6G4.36c SC6G4.36c - Streptomyces; E=5e-11 pir:H70859; hypothetical protein Rv3037c - Mycobacterium; E=2e-10 COG: Rv3037c; COG0500 SAM-dependent methyltransferases; E=2e-11; hypothetical protein 3348288..3349616 Rhodopirellula baltica SH 1 1790755 NP_867214.1 CDS RB6375 NC_005027.1 3349681 3350574 D hypothetical protein 3349681..3350574 Rhodopirellula baltica SH 1 1795862 NP_867215.1 CDS mdoH NC_005027.1 3350626 3352671 R necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH complement(3350626..3352671) Rhodopirellula baltica SH 1 1793547 NP_867216.1 CDS RB6378 NC_005027.1 3352598 3353284 D hypothetical protein 3352598..3353284 Rhodopirellula baltica SH 1 1790996 NP_867217.1 CDS RB6379 NC_005027.1 3352661 3353122 R hypothetical protein complement(3352661..3353122) Rhodopirellula baltica SH 1 1790540 NP_867218.1 CDS RB6380 NC_005027.1 3353359 3353583 D hypothetical protein 3353359..3353583 Rhodopirellula baltica SH 1 1794633 NP_867219.1 CDS RB6381 NC_005027.1 3353694 3355046 D PMID: 10910347 best DB hits: BLAST: pir:F82557; hypothetical protein XF2449 [imported] - Xylella; E=3e-50; hypothetical protein 3353694..3355046 Rhodopirellula baltica SH 1 1795080 NP_867220.1 CDS RB6382 NC_005027.1 3355043 3355162 R hypothetical protein complement(3355043..3355162) Rhodopirellula baltica SH 1 1795728 NP_867221.1 CDS mdoG NC_005027.1 3355184 3356905 D involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G 3355184..3356905 Rhodopirellula baltica SH 1 1791086 NP_867222.1 CDS RB6384 NC_005027.1 3356942 3358297 R PMID: 7934829 best DB hits: BLAST: swissprot:P35160; RESA_BACSU RESA PROTEIN ----- pir: S45556; E=3e-14 pir:E69891; cytochrome c biogenesis protein CycX homolog homolog; E=1e-12 ddbj:BAB06587.1; (AP001516) thioldisulfide interchange protein; E=1e-10 COG: BS_resA; COG0526 Thiol-disulfide isomerase and thioredoxins; E=2e-15 PFAM: PF00578; AhpC/TSA family; E=0.0027 PF02630; SCO1/SenC; E=0.28 PF00085; Thioredoxin; E=1.8e-08; thioredoxin related protein complement(3356942..3358297) Rhodopirellula baltica SH 1 1793646 NP_867223.1 CDS RB6386 NC_005027.1 3358338 3359480 R PMID: 10484179 best DB hits: BLAST: ddbj:BAB07065.1; (AP001518) BH3346~unknown conserved protein in; E=2e-11 swissprot:P49304; MOCC_RHIME RHIZOPINE CATABOLISM PROTEIN MOCC; E=0.84 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=0.38; hypothetical protein complement(3358338..3359480) Rhodopirellula baltica SH 1 1793431 NP_867224.1 CDS RB6387 NC_005027.1 3359525 3360448 R PMID: 10910347 best DB hits: BLAST: pir:G82780; conserved hypothetical protein XF0649 [imported] -; E=3e-13 embl:CAA97104.1; (Z72886) ORF YGR101w [Saccharomyces cerevisiae]; E=2e-10 pir:D71258; probable glpG protein - syphilis spirochete -----; E=1e-09 COG: XF0649; COG0705 Uncharacterized membrane protein (homolog of; E=3e-14 PFAM: PF01694; Rhomboid family; E=2.6e-11; hypothetical protein complement(3359525..3360448) Rhodopirellula baltica SH 1 1792347 NP_867225.1 CDS RB6388 NC_005027.1 3360472 3360906 R hypothetical protein complement(3360472..3360906) Rhodopirellula baltica SH 1 1793169 NP_867226.1 CDS RB6389 NC_005027.1 3360908 3361996 R PMID: 10865958 best DB hits: BLAST: swissprot:P54466; YQFA_BACSU HYPOTHETICAL 35.6 KD PROTEIN IN; E=4e-73 ddbj:BAB05076.1; (AP001511) BH1357~unknown conserved protein in; E=3e-72 embl:CAA12151.1; (AJ224829) ORF1 [Bacillus megaterium]; E=2e-71; hypothetical protein complement(3360908..3361996) Rhodopirellula baltica SH 1 1791794 NP_867227.1 CDS RB6390 NC_005027.1 3361959 3362219 D hypothetical protein 3361959..3362219 Rhodopirellula baltica SH 1 1796597 NP_867228.1 CDS rbn NC_005027.1 3362175 3363908 R PMID: 8955422 best DB hits: BLAST: gb:AAC33456.1; (AF067083) unknown [Vitreoscilla sp.]; E=7e-14 swissprot:P32146; RBN_ECOLI RIBONUCLEASE BN (RNASE BN) -----; E=2e-13 pir:F83526; probable ribonuclease PA0951 [imported] - Pseudomonas; E=1e-12 COG: rbn; COG1295 tRNA-processing ribonuclease BN; E=2e-14; ribonuclease BN complement(3362175..3363908) Rhodopirellula baltica SH 1 1793977 NP_867229.1 CDS RB6393 NC_005027.1 3363910 3364158 D hypothetical protein 3363910..3364158 Rhodopirellula baltica SH 1 1791075 NP_867230.1 CDS RB6394 NC_005027.1 3364068 3365288 R PMID: 10984043 best DB hits: BLAST: gb:AAH00605.1; AAH00605 (BC000605) glyoxylate; E=1e-66 ref:XP_005487.2; glyoxylate reductasehydroxypyruvate reductase; E=1e-66 gb:AAF51963.1; (AE003602) CG1236 gene product [Drosophila; E=7e-61 COG: APE1831; COG1052 Lactate dehydrogenase and related dehydrogenases; E=2e-60 PAB0514; COG0111 Phosphoglycerate dehydrogenase and related; E=3e-44 YNL274c; COG1052 Lactate dehydrogenase and related dehydrogenases; E=3e-34 PFAM: PF00389; D-isomer specific 2-hydroxyacid; E=2.4e-06 PF02826; D-isomer specific 2-hydroxyacid; E=2.6e-85; 2-hydroxyacid dehydrogenase complement(3364068..3365288) Rhodopirellula baltica SH 1 1792340 NP_867231.1 CDS RB6395 NC_005027.1 3364879 3367215 D PMID: 7511204 best DB hits: BLAST: pir:A56534; P58 protein - bovine ----- gb: AAA17795.1; E=2e-08 gb:AAC52592.1; (U28423) p58 [Mus musculus]; E=1e-07 gb:AAC50502.1; (U28424) p58 [Homo sapiens]; E=2e-07 COG: BB0210; COG0457 TPR-repeat-containing proteins; E=2e-04 PFAM: PF00515; TPR Domain; E=0.65; PKR inhibitor (translation regulation) 3364879..3367215 Rhodopirellula baltica SH 1 1791536 NP_867232.1 CDS RB6398 NC_005027.1 3367281 3368609 D hypothetical protein 3367281..3368609 Rhodopirellula baltica SH 1 1792643 NP_867233.1 CDS RB6400 NC_005027.1 3368649 3369926 D best DB hits: PFAM: PF00397; WW domain; E=0.54; hypothetical protein 3368649..3369926 Rhodopirellula baltica SH 1 1796746 NP_867234.1 CDS RB6403 NC_005027.1 3369939 3370853 D PMID: 10910347 best DB hits: BLAST: pir:T34675; probable response regulator - Streptomyces coelicolor; E=1e-05 pir:A82535; transcriptional regulator LuxRUhpA family XF2608; E=4e-05 pir:T35105; probable two-component regulator - Streptomyces; E=7e-05 COG: XF2608; COG2197 Response regulators consisting of a CheY-like; E=4e-06 PA3420; COG2909 ATP-dependent transcriptional regulator; E=4e-04 PA3714; COG2197 Response regulators consisting of a CheY-like; E=4e-04 PFAM: PF00989; PAS domain; E=4.2e-06 PF00196; Bacterial regulatory proteins, luxR; E=3.1e-14; response regulator 3369939..3370853 Rhodopirellula baltica SH 1 1790811 NP_867235.1 CDS RB6405 NC_005027.1 3371087 3371368 R hypothetical protein complement(3371087..3371368) Rhodopirellula baltica SH 1 1794449 NP_867236.1 CDS RB6407 NC_005027.1 3371502 3371975 R hypothetical protein complement(3371502..3371975) Rhodopirellula baltica SH 1 1791662 NP_867237.1 CDS RB6408 NC_005027.1 3371976 3372284 D hypothetical protein 3371976..3372284 Rhodopirellula baltica SH 1 1796922 NP_867238.1 CDS RB6409 NC_005027.1 3372456 3373544 R PMID: 8843436 best DB hits: BLAST: embl:CAB56131.1; (AL117669) hypothetical protein [Streptomyces; E=8e-21 pir:T35709; hypothetical protein SC7H1.14 SC7H1.14 - Streptomyces; E=9e-20; hypothetical protein complement(3372456..3373544) Rhodopirellula baltica SH 1 1790430 NP_867239.1 CDS truB NC_005027.1 3373581 3374627 R PMID: 8905231 best DB hits: BLAST: swissprot:P74696; TRUB_SYNY3 TRNA PSEUDOURIDINE SYNTHASE B (TRNA; E=5e-36 swissprot:P72154; TRUB_PSEAE TRNA PSEUDOURIDINE SYNTHASE B (TRNA; E=2e-32 swissprot:P32732; TRUB_BACSU TRNA PSEUDOURIDINE SYNTHASE B (TRNA; E=1e-27 COG: slr0457; COG0130 Pseudouridine synthase; E=4e-37 PFAM: PF01509; TruB family pseudouridylate synthase; E=2.5e-39; tRNA pseudouridine synthase B complement(3373581..3374627) Rhodopirellula baltica SH 1 1792912 NP_867240.1 CDS RB6413 NC_005027.1 3374723 3375979 R hypothetical protein complement(3374723..3375979) Rhodopirellula baltica SH 1 1795291 NP_867241.1 CDS RB6415 NC_005027.1 3376119 3376394 R PMID: 6313685 best DB hits: BLAST: pdb:1F5B; A Chain A, Crystal Structure Of F2h Ferredoxin 1; E=3e-21 pdb:1FRM; Ferredoxin (Fdi) Mutant With Glu 46 Replaced By; E=4e-21 swissprot:P03942; FER_THETH FERREDOXIN ----- pir: FETWT; E=8e-21 COG: PA3621; COG1146 Ferredoxin 3; E=2e-20 APE2605; COG0437 Fe-S-cluster-containing hydrogenase components 1; E=0.004 ygfS; COG1142 Fe-S-cluster-containing hydrogenase components 2; E=0.005 PFAM: PF00037; 4Fe-4S binding domain; E=2.1e-07; ferredoxin complement(3376119..3376394) Rhodopirellula baltica SH 1 1791257 NP_867242.1 CDS RB6416 NC_005027.1 3376574 3377935 D PMID: 8905232 best DB hits: BLAST: swissprot:P75876; YCCW_ECOLI HYPOTHETICAL 41.1 KD PROTEIN IN; E=7e-47 ddbj:BAA35732.1; (D90734) Hypothetical protein [Escherichia coli]; E=7e-47 gb:AAG55453.1; AE005286_12 (AE005286) oxidoreductase; E=8e-47 COG: yccW; COG1092 Predicted SAM-dependent methyltransferases; E=7e-48 BH0124; COG2813 16S RNA G1207 methylase RsmC; E=1e-04 PA3048_2; COG1092 Predicted SAM-dependent methyltransferases; E=1e-04 PFAM: PF00107; Zinc-binding dehydrogenases; E=0.039 PF02005; N2,N2-dimethylguanosine tRNA methylt; E=0.033; SAM-dependent methyltransferase 3376574..3377935 Rhodopirellula baltica SH 1 1793117 NP_867243.1 CDS RB6417 NC_005027.1 3378045 3378794 D PMID: 9634230 PMID: 7482699 best DB hits: BLAST: pir:B70700; hypothetical protein Rv0020c - Mycobacterium; E=8e-06 pir:T10015; hypothetical protein MLB1770.15c - Mycobacterium leprae; E=4e-05 ddbj:BAB20624.1; (AB052847) adenylate cyclase; E=0.001 COG: Rv0020c_2; COG1716 FHA-domain-containing proteins; E=4e-06 PFAM: PF00498; FHA domain; E=8.9e-17; hypothetical protein 3378045..3378794 Rhodopirellula baltica SH 1 1791915 NP_867244.1 CDS RB6420 NC_005027.1 3378859 3380619 D hypothetical protein 3378859..3380619 Rhodopirellula baltica SH 1 1789951 NP_867245.1 CDS RB6423 NC_005027.1 3380603 3380740 D hypothetical protein 3380603..3380740 Rhodopirellula baltica SH 1 1794549 NP_867246.1 CDS rpmJ NC_005027.1 3380727 3380879 D PMID: 9929392 best DB hits: BLAST: gb:AAC35721.1; (AF041468) ribosomal protein L36 [Guillardia; E=8e-07 pir:D82269; probable ribosomal protein L36 VC0879 [imported] -; E=1e-05 pir:B83196; conserved hypothetical protein PA3600 [imported] -; E=7e-05 COG: VC0879; COG0257 Ribosomal protein L36; E=9e-07 PFAM: PF00444; Ribosomal protein L36; E=6.9e-09; ribosomal protein L36 3380727..3380879 Rhodopirellula baltica SH 1 1790180 NP_867247.1 CDS RB6426 NC_005027.1 3380929 3382257 D PMID: 11259647; hypothetical protein 3380929..3382257 Rhodopirellula baltica SH 1 1794177 NP_867248.1 CDS RB6428 NC_005027.1 3382322 3382816 R PMID: 11097914 best DB hits: BLAST: gb:AAF01193.1; AF179401_2 (AF179401) unknown [Sinorhizobium; E=9e-28 swissprot:P74615; YE83_SYNY3 HYPOTHETICAL 18.5 KDA PROTEIN SLL1483; E=2e-27 swissprot:O33752; YH35_SYNP2 HYPOTHETICAL 13.9 KDA PROTEIN SLL1735; E=7e-20 COG: sll1483; COG2335 Secreted and surface protein containing; E=2e-28 PFAM: PF02469; Fasciclin domain; E=6.8e-44; hypothetical protein complement(3382322..3382816) Rhodopirellula baltica SH 1 1796273 NP_867249.1 CDS RB6429 NC_005027.1 3382813 3382998 R hypothetical protein complement(3382813..3382998) Rhodopirellula baltica SH 1 1793538 NP_867250.1 CDS RB6430 NC_005027.1 3383157 3384044 D hypothetical protein 3383157..3384044 Rhodopirellula baltica SH 1 1791768 NP_867251.1 CDS RB6431 NC_005027.1 3384209 3385699 R hypothetical protein complement(3384209..3385699) Rhodopirellula baltica SH 1 1790190 NP_867252.1 CDS RB6432 NC_005027.1 3385719 3388430 R best DB hits: PFAM: PF01002; Flavivirus non-structural prot; E=0.28; hypothetical protein complement(3385719..3388430) Rhodopirellula baltica SH 1 1791811 NP_867253.1 CDS RB6434 NC_005027.1 3388536 3388682 R hypothetical protein complement(3388536..3388682) Rhodopirellula baltica SH 1 1791910 NP_867254.1 CDS acpS NC_005027.1 3388640 3389017 R best DB hits: BLAST: swissprot:O69159; ACPS_BRAJA HOLO-[ACYL-CARRIER PROTEIN]; E=2e-10 swissprot:Q9Z8M5; ACPS_CHLPN HOLO-[ACYL-CARRIER PROTEIN]; E=5e-09 swissprot:P15368; FAS2_PENPA FATTY ACID SYNTHASE, SUBUNIT ALPHA; E=1e-07 COG: CPn0313; COG0736 Phosphopantetheinyl transferase (holo-ACP; E=5e-10 VC2457; COG0736 Phosphopantetheinyl transferase (holo-ACP synthase); E=2e-06 aq_813; COG0736 Phosphopantetheinyl transferase (holo-ACP; E=3e-06 PFAM: PF01648; 4'-phosphopantetheinyl transferase s; E=6.1e-24; holo-[acyl-carrier protein] synthase complement(3388640..3389017) Rhodopirellula baltica SH 1 1797027 NP_867255.1 CDS trpS NC_005027.1 3389021 3389983 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(3389021..3389983) Rhodopirellula baltica SH 1 1791723 NP_867256.1 CDS RB6438 NC_005027.1 3390208 3391665 R hypothetical protein complement(3390208..3391665) Rhodopirellula baltica SH 1 1793305 NP_867257.1 CDS RB6440 NC_005027.1 3391656 3391829 D hypothetical protein 3391656..3391829 Rhodopirellula baltica SH 1 1794646 NP_867258.1 CDS RB6441 NC_005027.1 3391780 3392022 R hypothetical protein complement(3391780..3392022) Rhodopirellula baltica SH 1 1794116 NP_867259.1 CDS metB NC_005027.1 3391970 3393274 D PMID: 9002610 best DB hits: BLAST: embl:CAA64383.1; (X94756) cystathionine gamma-synthase; E=2e-75 gb:AAF26162.1; AC008261_19 (AC008261) cystathionine; E=2e-75 swissprot:P55217; METB_ARATH CYSTATHIONINE GAMMA-SYNTHASE,; E=3e-75 COG: APE1226; COG0626 Cystathionine beta-lyases/cystathionine; E=1e-64 PA5025; COG2873 O-acetylhomoserine sulfhydrylase; E=4e-47 PH1093; COG0626 Cystathionine beta-lyases/cystathionine; E=5e-47 PFAM: PF01053; Cys/Met metabolism PLP-depend; E=4.5e-154; cystathionine gamma-synthase 3391970..3393274 Rhodopirellula baltica SH 1 1795549 NP_867260.1 CDS metB NC_005027.1 3393276 3394469 D PMID: 9843488 best DB hits: BLAST: pir:T45483; cystathionine gamma-lyase homolog [imported] -; E=9e-93 pir:F83595; probable cystathionine gamma-lyase PA0400 [imported] -; E=1e-92 gb:AAG19548.1; (AE005045) cystathionine alpha synthase; MetB; E=3e-92 COG: PA0400; COG0626 Cystathionine beta-lyases/cystathionine; E=1e-93 PFAM: PF01053; Cys/Met metabolism PLP-depend; E=2.9e-199; cystathionine gamma-lyase 3393276..3394469 Rhodopirellula baltica SH 1 1794028 NP_867261.1 CDS RB6444 NC_005027.1 3394492 3394686 R hypothetical protein complement(3394492..3394686) Rhodopirellula baltica SH 1 1791479 NP_867262.1 CDS RB6446 NC_005027.1 3394630 3395670 D PMID: 9403685 best DB hits: BLAST: pir:G70121; conserved hypothetical protein BB0175 - Lyme disease; E=2e-13 swissprot:P71761; YE80_MYCTU HYPOTHETICAL 34.3 KDA PROTEIN RV1480; E=3e-11 pir:D83106; hypothetical protein PA4323 [imported] - Pseudomonas; E=1e-09 COG: BB0175; COG1721 Uncharacterized ACR; E=2e-14 APE1031; COG2425 Uncharacterized ACR; E=0.002 VNG0222C; COG1721 Uncharacterized ACR; E=0.008 PFAM: PF01882; Protein of unknown function DUF58; E=5.9e-18; hypothetical protein 3394630..3395670 Rhodopirellula baltica SH 1 1794603 NP_867263.1 CDS RB6447 NC_005027.1 3395667 3397970 D PMID: 11756688; hypothetical protein 3395667..3397970 Rhodopirellula baltica SH 1 1792034 NP_867264.1 CDS RB6448 NC_005027.1 3397889 3400441 D PMID: 10617197 best DB hits: BLAST: gb:AAD03363.1; (AC005957) EnSpm-like transposon protein; E=0.89; en/Spm-like transposon protein 3397889..3400441 Rhodopirellula baltica SH 1 1790501 NP_867265.1 CDS RB6449 NC_005027.1 3400438 3406236 D PMID: 7783620 best DB hits: BLAST: pir:A81937; IgA-specific metalloendopeptidase (EC 3.4.24.13) NMA0905; E=6e-08 pir:C81169; IgA-specific metalloendopeptidase (EC 3.4.24.13) NMB0700; E=9e-07 pir:T18296; myosin heavy chain - Entamoeba histolytica ----- gb:; E=9e-05; IgA-specific metalloendopeptidase 3400438..3406236 Rhodopirellula baltica SH 1 1792073 NP_867266.1 CDS RB6452 NC_005027.1 3406233 3407384 D hypothetical protein 3406233..3407384 Rhodopirellula baltica SH 1 1796131 NP_867267.1 CDS RB6454 NC_005027.1 3407495 3407776 R hypothetical protein complement(3407495..3407776) Rhodopirellula baltica SH 1 1791645 NP_867268.1 CDS RB6457 NC_005027.1 3407787 3407990 R hypothetical protein complement(3407787..3407990) Rhodopirellula baltica SH 1 1791462 NP_867269.1 CDS RB6458 NC_005027.1 3407939 3408754 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 3407939..3408754 Rhodopirellula baltica SH 1 1790051 NP_867270.1 CDS RB6459 NC_005027.1 3408788 3414874 D PMID: 9346930 best DB hits: BLAST: pir:T08617; aggregation factor core protein MAFp3, isoform E -; E=5e-04; aggregation factor core protein MAFp3, isoform E 3408788..3414874 Rhodopirellula baltica SH 1 1791641 NP_867271.1 CDS RB6462 NC_005027.1 3414908 3415180 D hypothetical protein 3414908..3415180 Rhodopirellula baltica SH 1 1793069 NP_867272.1 CDS RB6463 NC_005027.1 3415155 3415724 D hypothetical protein 3415155..3415724 Rhodopirellula baltica SH 1 1791183 NP_867273.1 CDS sqdC NC_005027.1 3415696 3416580 R PMID: 10830266 best DB hits: BLAST: gb:AAF35290.1; AF194444_3 (AF194444) SqdC [Sinorhizobium meliloti]; E=2e-18 pir:D81275; probable nucleotide sugar dehydratase Cj1319 [imported]; E=3e-15 pir:D70696; probable dtdp-glucose 4 - Mycobacterium tuberculosis; E=9e-15 COG: Cj1319; COG0451 Nucleoside-diphosphate-sugar epimerases; E=3e-16 aq_1069; COG1087 UDP-glucose 4-epimerase; E=1e-12 MTH1789; COG1088 dTDP-D-glucose 4,6-dehydratase; E=3e-11 PFAM: PF01073; 3-beta hydroxysteroid dehydrogenase; E=0.014 PF01370; NAD dependent epimerase/dehydratase; E=5.8e-16; sulfolipid biosynthesis protein SqdC complement(3415696..3416580) Rhodopirellula baltica SH 1 1790728 NP_867274.1 CDS typA NC_005027.1 3416688 3418610 D PMID: 10567266 best DB hits: BLAST: pir:E75426; GTP-binding translation elongation factor homolog; E=1e-163 pir:H81111; GTP-binding protein TypA NMB1199 [imported] - Neisseria; E=1e-161 pir:D81906; probable GTP-binding protein NMA1370 [imported] -; E=1e-161 COG: DR1198; COG1217 Predicted membrane GTPase involved in stress; E=1e-164 typA; COG1217 Predicted membrane GTPase involved in stress response; E=1e-156 BS_ylaG; COG1217 Predicted membrane GTPase involved in stress; E=1e-155 PFAM: PF00009; Elongation factor Tu family; E=2.1e-91 PF00679; Elongation factor G C-terminus; E=3.9e-06; GTP-binding translation elongation factor-like protein 3416688..3418610 Rhodopirellula baltica SH 1 1796036 NP_867275.1 CDS RB6467 NC_005027.1 3418620 3419378 D PMID: 9537320 best DB hits: BLAST: pir:A70471; phosphoglycerate mutase 1 - Aquifex aeolicus -----; E=0.006 pir:G69831; phosphoglycerate mutase (glycolysis) homolog yhfR -; E=0.012 embl:CAA99510.1; (Z75191) ORF YOR283w [Saccharomyces; E=0.021 COG: aq_1990; COG0406 Phosphoglycerate; E=6e-04 BS_yhfR; COG0406 Phosphoglycerate mutase/fructose-2,6-bisphosphatase; E=0.001 YOR283w; COG0406 Phosphoglycerate; E=0.002 PFAM: PF00300; Phosphoglycerate mutase; E=3.9e-05; phosphoglycerate mutase 1 3418620..3419378 Rhodopirellula baltica SH 1 1789956 NP_867276.1 CDS RB6469 NC_005027.1 3419515 3420273 D best DB hits: BLAST: pir:F82572; sodium ABC transporter ATP-binding protein XF2329; E=8e-44 swissprot:P46903; NATA_BACSU ATP-BINDING TRANSPORT PROTEIN NATA; E=2e-40 pir:B75459; sodium extrusion protein NatA - Deinococcus radiodurans; E=3e-39 COG: XF2329; COG1131 ABC-type multidrug transport system, ATPase; E=8e-45 ybhF; COG1131 ABC-type multidrug transport system, ATPase component; E=7e-32 PFAM: PF00448; SRP54-type protein, GTPase do; E=0.26 PF00005; ABC transporter; E=6.2e-51; sodium ABC transporter ATP-binding protein 3419515..3420273 Rhodopirellula baltica SH 1 1794229 NP_867277.1 CDS natB NC_005027.1 3420270 3422375 D PMID: 10567266 best DB hits: BLAST: pir:A75459; sodium extrusion protein NatB - Deinococcus radiodurans; E=1e-09 swissprot:P46904; NATB_BACSU PROTEIN NATB ----- pir: B69666; E=3e-07 ddbj:BAA22237.1; (AB000617) NatB [Bacillus subtilis]; E=0.002 COG: DR0926; COG1668 ATP-dependent Na+ efflux pump membrane component; E=1e-10 ybhS; COG0842 Permease component of an ABC-transporter; E=0.003 PFAM: PF02517; CAAX amino terminal protease; E=1.8e-15; sodium extrusion protein NatB 3420270..3422375 Rhodopirellula baltica SH 1 1790593 NP_867278.1 CDS murG NC_005027.1 3422372 3423970 R PMID: 9384377 best DB hits: BLAST: pir:A55856; llm protein - Staphylococcus aureus ----- ddbj:; E=7e-25 pir:B69721; teichoic acid linkage unit synthesis tagO - Bacillus; E=5e-24 ddbj:BAA82114.1; (AB022909) RgpG [Streptococcus mutans]; E=5e-23 COG: BS_tagO; COG0472 UDP-N-acetylmuramyl pentapeptide; E=4e-25 PFAM: PF00953; Glycosyl transferase; E=4e-32; undecaprenyl-phosphate N-acetylglucosaminyltransferase complement(3422372..3423970) Rhodopirellula baltica SH 1 1796590 NP_867279.1 CDS RB6475 NC_005027.1 3424095 3424313 D hypothetical protein 3424095..3424313 Rhodopirellula baltica SH 1 1789931 NP_867280.1 CDS RB6477 NC_005027.1 3424543 3425652 D hypothetical protein 3424543..3425652 Rhodopirellula baltica SH 1 1792794 NP_867281.1 CDS RB6480 NC_005027.1 3425693 3427075 D best DB hits: BLAST: pir:F70345; polysaccharide biosynthesis protein - Aquifex aeolicus; E=0.61; polysaccharide biosynthesis protein 3425693..3427075 Rhodopirellula baltica SH 1 1793050 NP_867282.1 CDS rluD NC_005027.1 3427166 3427936 R PMID: 10484179 PMID: 7493321 best DB hits: BLAST: ddbj:BAB06566.1; (AP001516) BH2847~unknown conserved protein; E=9e-22 swissprot:O31613; YJBO_BACSU HYPOTHETICAL 31.5 KD PROTEIN IN; E=3e-19 swissprot:Q45480; YLYB_BACSU HYPOTHETICAL 33.7 KD PROTEIN IN; E=8e-19 COG: BH2847; COG0564 Pseudouridylate synthases, 23S RNA-specific; E=9e-23 PFAM: PF00849; RNA pseudouridylate synthase; E=1.7e-33; ribosomal large subunit pseudouridine synthase D complement(3427166..3427936) Rhodopirellula baltica SH 1 1794167 NP_867283.1 CDS recQ NC_005027.1 3427842 3429392 D PMID: 8300539 PMID: 2164680 best DB hits: BLAST: gb:AAF33434.1; (AF233324) S. typhimurium DNA-dependent ATPase DNA; E=5e-61 swissprot:P15043; RECQ_ECOLI ATP-DEPENDENT DNA HELICASE RECQ; E=6e-61 gb:AAA24517.1; (M30198) recQ [Escherichia coli]; E=1e-60 COG: recQ; COG0514 Superfamily II DNA helicase; E=1e-61 YDR021w; COG0513 Superfamily II DNA and RNA helicases; E=8e-10 PFAM: PF00270; DEAD/DEAH box helicase; E=4.1e-34 PF00271; Helicase conserved C-terminal doma; E=5.1e-23; ATP-dependent DNA helicase RecQ 3427842..3429392 Rhodopirellula baltica SH 1 1795802 NP_867284.1 CDS folP NC_005027.1 3429369 3430289 R PMID: 8905231 PMID: 8304179 best DB hits: BLAST: swissprot:P73248; DHPS_SYNY3 DIHYDROPTEROATE SYNTHASE (DHPS); E=2e-51 pir:E83053; dihydropteroate synthase PA4750 [imported] - Pseudomonas; E=2e-49 pir:E72425; dihydropteroate synthase (EC 2.5.1.15) TM0040; E=2e-45 COG: slr2026; COG0294 Dihydropteroate synthase; E=2e-52 PFAM: PF00809; Dihydropteroate synthase; E=1.1e-113; dihydropteroate synthase complement(3429369..3430289) Rhodopirellula baltica SH 1 1794459 NP_867285.1 CDS hemN NC_005027.1 3430286 3431686 R PMID: 10484179 PMID: 7768836 best DB hits: BLAST: ddbj:BAB05062.1; (AP001511) coproporphyrinogen III oxidase; E=1e-32 swissprot:O67886; HEMN_AQUAE OXYGEN-INDEPENDENT COPROPORPHYRINOGEN; E=2e-31 ddbj:BAB10571.1; (AB008265) oxygen-independent; E=6e-30 COG: BH1343; COG0635 Coproporphyrinogen III oxidase and related FeS; E=1e-33 PFAM: PF02473; Oxygen-independent Coproporphy; E=9.5e-08; coproporphyrinogen III oxidase complement(3430286..3431686) Rhodopirellula baltica SH 1 1796016 NP_867286.1 CDS RB6486 NC_005027.1 3431741 3433108 R PMID: 9371463 best DB hits: BLAST: pir:H69064; serinethreonine protein kinase related protein -; E=3e-13 pir:C75264; probable serinethreonine protein kinase - Deinococcus; E=1e-08 swissprot:P42111; YXAL_BACSU HYPOTHETICAL 38.5 KDA PROTEIN IN; E=5e-07 COG: MTH1485; COG1520 Uncharacterized proteins of WD40-like repeat family; E=3e-14 DR2518_2; COG1520 Uncharacterized proteins of WD40-like repeat; E=5e-09 BS_yxaL; COG1520 Uncharacterized proteins of WD40-like repeat family; E=4e-08 PFAM: PF01011; PQQ enzyme repeat; E=0.0066; serine/threonine protein kinase related protein complement(3431741..3433108) Rhodopirellula baltica SH 1 1794364 NP_867287.1 CDS RB6488 NC_005027.1 3433231 3434721 D PMID: 8067995 best DB hits: BLAST: gb:AAF08579.1; AC011623_12 (AC011623) dehydroquinase; E=2e-74 pir:S46210; 3-dehydroquinate dehydratase (EC 4.2.1.10) shikimate; E=6e-67 pir:T06264; 3-dehydroquinate dehydratase (EC 4.2.1.10) shikimate; E=2e-65 COG: BS_aroD; COG0169 Shikimate 5-dehydrogenase; E=4e-39 PAB0299; COG0710 3-dehydroquinate dehydratase; E=6e-18 Ta0284; COG0169 Shikimate 5-dehydrogenase; E=4e-17 PFAM: PF01487; Type I 3-dehydroquinase; E=1.6e-40 PF01488; Shikimate / quinate 5-dehydrogen; E=8e-72; 3-dehydroquinate dehydratase 3433231..3434721 Rhodopirellula baltica SH 1 1791185 NP_867288.1 CDS RB6489 NC_005027.1 3434765 3435940 R PMID: 9642221 best DB hits: BLAST: ddbj:BAA31547.1; (AB010956) metal-activated pyridoxal enzyme; E=1e-15 gb:AAG24954.1; AF242414_1 (AF242414) unknown [Paenibacillus; E=0.004 swissprot:P71683; YE14_MYCTU HYPOTHETICAL 14.3 KDA PROTEIN RV1414; E=0.65 PFAM: PF00842; Alanine racemase; E=0.0019; D-threonine aldolase, metal-activated pyridoxal enzyme complement(3434765..3435940) Rhodopirellula baltica SH 1 1795324 NP_867289.1 CDS degP NC_005027.1 3435918 3437117 R PMID: 9507020 best DB hits: BLAST: ddbj:BAB02539.1; (AP000371) DegP protease precursor [Arabidopsis; E=5e-87 swissprot:O22609; DEGP_ARATH PROTEASE DO-LIKE PRECURSOR -----; E=9e-87 ddbj:BAA98101.1; (AB024023) contains similarity to serine; E=2e-71 COG: TP0773; COG0265 Trypsin-like serine proteases, typically; E=3e-48 CT823; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=3e-37 Cj1228c; COG0265 Trypsin-like serine proteases, typically; E=2e-36 PFAM: PF00089; Trypsin; E=5.9e-26 PF00595; PDZ domain (Also known as DHR or GLG; E=0.0029; protease Do complement(3435918..3437117) Rhodopirellula baltica SH 1 1796757 NP_867290.1 CDS RB6491 NC_005027.1 3437096 3438676 R PMID: 2203540 best DB hits: BLAST: gb:AAC82369.1; (AF061965) RNA polymerase subunit sigma-54; E=1e-121 gb:AAG58336.1; AE005548_7 (AE005548) RNA polymerase, sigma(54 or; E=7e-59 swissprot:P24255; RP54_ECOLI RNA POLYMERASE SIGMA-54 FACTOR; E=2e-58 COG: rpoN; COG1508 DNA-directed RNA polymerase specialized sigma; E=2e-59 PFAM: PF00356; Bacterial regulatory proteins; E=0.018 PF00309; Sigma-54 factors family; E=4e-155; RNA polymerase subunit sigma-54 complement(3437096..3438676) Rhodopirellula baltica SH 1 1790511 NP_867291.1 CDS recR NC_005027.1 3438696 3439295 R PMID: 10567266 PMID: 2674903 best DB hits: BLAST: swissprot:Q9XAI4; RECR_STRCO RECOMBINATION PROTEIN RECR -----; E=3e-42 swissprot:Q9ZNA2; RECR_DEIRA RECOMBINATION PROTEIN RECR -----; E=4e-42 swissprot:O69520; RECR_MYCLE RECOMBINATION PROTEIN RECR -----; E=5e-42 COG: DR0198; COG0353 Recombinational DNA repair protein; E=4e-43 PFAM: PF00633; Helix-hairpin-helix motif.; E=0.21 PF02904; RuvA central domain II; E=0.049 PF02132; RecR protein; E=1.8e-14; recombinant protein RecR complement(3438696..3439295) Rhodopirellula baltica SH 1 1791389 NP_867292.1 CDS RB6493 NC_005027.1 3439292 3439678 R PMID: 11823852 best DB hits: BLAST: swissprot:P17577; YBAB_ECOLI HYPOTHETICAL 12.0 KDA PROTEIN IN; E=0.12 swissprot:Q9ZCA0; Y866_RICPR HYPOTHETICAL PROTEIN RP866 -----; E=0.12 gb:AAK02289.1; (AE006055) unknown [Pasteurella multocida]; E=0.24 PFAM: PF02575; Uncharacterized BCR, YbaB family COG; E=2.7e-07; hypothetical protein complement(3439292..3439678) Rhodopirellula baltica SH 1 1793568 NP_867293.1 CDS dnaX NC_005027.1 3439757 3441787 R PMID: 10192928 PMID: 2186364 best DB hits: BLAST: ddbj:BAB03753.1; (AP001507) DNA polymerase III gamma and tau; E=9e-72 pir:S13786; DNA-directed DNA polymerase (EC 2.7.7.7) III chain dnaX; E=5e-66 swissprot:P09122; DP3X_BACSU DNA POLYMERASE III SUBUNIT GAMMATAU; E=5e-66 COG: BH0034; COG2812 DNA polymerase III, gamma/tau subunits; E=9e-73 PFAM: PF00693; Thymidine kinase from herpesviru; E=0.18 PF00004; ATPase associated with va; E=7.6e-14; DNA polymerase III gamma and tau subunits complement(3439757..3441787) Rhodopirellula baltica SH 1 1792833 NP_867294.1 CDS RB6495 NC_005027.1 3441842 3441961 R hypothetical protein complement(3441842..3441961) Rhodopirellula baltica SH 1 1791450 NP_867295.1 CDS RB6496 NC_005027.1 3441948 3442121 D hypothetical protein 3441948..3442121 Rhodopirellula baltica SH 1 1792488 NP_867296.1 CDS RB6497 NC_005027.1 3442109 3442804 D PMID: 11823852; hypothetical protein 3442109..3442804 Rhodopirellula baltica SH 1 1793309 NP_867297.1 CDS RB6498 NC_005027.1 3442214 3442882 R hypothetical protein complement(3442214..3442882) Rhodopirellula baltica SH 1 1796944 NP_867298.1 CDS rarD NC_005027.1 3442866 3443810 R PMID: 10952301 best DB hits: BLAST: pir:D82351; rarD protein VC0195 [imported] - Vibrio cholerae (group; E=4e-38 embl:CAC08293.1; (AL392148) integral membrane protein; E=1e-36 gb:AAG59015.1; AE005613_8 (AE005613) orf, hypothetical protein; E=1e-35 COG: VC0195; COG2962 Predicted permeases; E=3e-39 PFAM: PF00892; Integral membrane protein DUF6; E=5.7e-12; RarD protein (chloramphenicol resistance) complement(3442866..3443810) Rhodopirellula baltica SH 1 1793655 NP_867299.1 CDS RB6500 NC_005027.1 3443803 3454800 R PMID: 3880746 best DB hits: BLAST: pir:S72705; mycocerosate synthase (EC 2.3.1.111) - Mycobacterium; E=0.0 pir:H70819; probable polyketide synthase - Mycobacterium tuberculosis; E=0.0 gb:AAF62883.1; AF217189_6 (AF217189) epoD [Sorangium cellulosum]; E=1e-180 COG: PA2402_3; COG1020 Non-ribosomal peptide synthetase modules and related; E=4e-99 BS_ppsD_3; COG1020 Non-ribosomal peptide synthetase modules and; E=4e-92 PA2424_2; COG1020 Non-ribosomal peptide synthetase modules and related; E=1e-91 PFAM: PF00108; Thiolase, N-terminal domain; E=2.7e-06 PF00109; Beta-ketoacyl synthase, N-ter; E=7.7e-115 PF02801; Beta-ketoacyl synthase, C-ter; E=2.4e-81; mycocerosate synthase complement(3443803..3454800) Rhodopirellula baltica SH 1 1791987 NP_867300.1 CDS RB6502 NC_005027.1 3454804 3455943 R PMID: 9371463 best DB hits: BLAST: pir:F69192; conserved hypothetical protein MTH695 - Methanobacterium; E=2e-30 swissprot:Q58902; YF07_METJA HYPOTHETICAL PROTEIN MJ1507 -----; E=5e-10 gb:AAB89778.1; (AE001001) conserved hypothetical protein; E=2e-09 COG: MTH695; COG0577 Predicted permease; E=2e-31 PFAM: PF02687; Predicted permease; E=4.3e-26; permease complement(3454804..3455943) Rhodopirellula baltica SH 1 1796759 NP_867301.1 CDS RB6503 NC_005027.1 3455940 3456092 R hypothetical protein complement(3455940..3456092) Rhodopirellula baltica SH 1 1791508 NP_867302.1 CDS RB6504 NC_005027.1 3455959 3456120 R hypothetical protein complement(3455959..3456120) Rhodopirellula baltica SH 1 1795709 NP_867303.1 CDS RB6505 NC_005027.1 3456110 3456265 R hypothetical protein complement(3456110..3456265) Rhodopirellula baltica SH 1 1795016 NP_867304.1 CDS RB6506 NC_005027.1 3456133 3456243 R hypothetical protein complement(3456133..3456243) Rhodopirellula baltica SH 1 1795054 NP_867305.1 CDS RB6507 NC_005027.1 3456252 3457370 D hypothetical protein 3456252..3457370 Rhodopirellula baltica SH 1 1794941 NP_867306.1 CDS RB6510 NC_005027.1 3457390 3458832 R PMID: 12024217; hypothetical protein complement(3457390..3458832) Rhodopirellula baltica SH 1 1796940 NP_867307.1 CDS RB6511 NC_005027.1 3458838 3461846 R hypothetical protein complement(3458838..3461846) Rhodopirellula baltica SH 1 1794929 NP_867308.1 CDS RB6515 NC_005027.1 3461858 3462055 R hypothetical protein complement(3461858..3462055) Rhodopirellula baltica SH 1 1791629 NP_867309.1 CDS RB6517 NC_005027.1 3462062 3462598 D PMID: 8843436 best DB hits: BLAST: embl:CAC17654.1; (AL450450) ECF sigma factor; E=0.001 pir:G83282; probable sigma-70 factor, ECF subfamily PA2896; E=0.003 gb:AAA67931.1; (U16817) alternative sigma factor; E=0.014 COG: PA2896; COG1595 DNA-directed RNA polymerase specialized sigma; E=3e-04 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=3.9e-08 PF01603; Protein phosphatase 2A regulatory; E=0.46; ECF family RNA polymerase sigma factor 3462062..3462598 Rhodopirellula baltica SH 1 1792180 NP_867310.1 CDS RB6518 NC_005027.1 3462626 3464260 D PMID: 11062057 best DB hits: BLAST: gb:AAG32160.1; AF206329_1 (AF206329) polydom protein [Mus musculus]; E=0.28; pentaxin domain-containing protein 3462626..3464260 Rhodopirellula baltica SH 1 1790050 NP_867311.1 CDS RB6520 NC_005027.1 3464301 3465425 R best DB hits: BLAST: gb:AAD46732.1; AF078736_12 (AF078736) glycosyl; E=7e-20 gb:AAD50490.1; AF172324_8 (AF172324) WbnE [Escherichia coli]; E=9e-18 gb:AAF23993.1; (AF035937) WbpT [Pseudomonas aeruginosa]; E=1e-16 COG: DR1555; COG0438 Predicted glycosyltransferases; E=6e-14 PFAM: PF00534; Glycosyl transferases group 1; E=1.9e-35; glycosyl transferase complement(3464301..3465425) Rhodopirellula baltica SH 1 1793731 NP_867312.1 CDS RB6523 NC_005027.1 3465422 3466675 R hypothetical protein complement(3465422..3466675) Rhodopirellula baltica SH 1 1796941 NP_867313.1 CDS hpt NC_005027.1 3466672 3467205 R PMID: 10192928 best DB hits: BLAST: pir:T36331; probable hypoxanthine phosphoribosyltransferase -; E=6e-27 ddbj:BAB03803.1; (AP001507) hypoxanthine-guanine; E=8e-23 embl:CAB60853.1; (AL132877) predicted using Genefinder; E=1e-22 COG: BH0084; COG0634 Hypoxanthine-guanine phosphoribosyltransferase; E=7e-24 BU169; COG0462 Phosphoribosylpyrophosphate synthetase; E=0.002 APE2071; COG2236 Predicted phosphoribosyltransferases; E=0.007 PFAM: PF00156; Phosphoribosyl transferase domai; E=1.5e-15; hypoxanthine-guanine phosphoribosyltransferase complement(3466672..3467205) Rhodopirellula baltica SH 1 1795172 NP_867314.1 CDS RB6525 NC_005027.1 3467212 3467454 R hypothetical protein complement(3467212..3467454) Rhodopirellula baltica SH 1 1794469 NP_867315.1 CDS RB6528 NC_005027.1 3467440 3467784 D hypothetical protein 3467440..3467784 Rhodopirellula baltica SH 1 1794709 NP_867316.1 CDS RB6530 NC_005027.1 3467807 3468520 R PMID: 9278503 best DB hits: BLAST: swissprot:P29217; YCEH_ECOLI HYPOTHETICAL 24.2 KDA PROTEIN IN; E=2e-19 gb:AAG55813.1; AE005317_2 (AE005317) orf, hypothetical protein; E=2e-19 pir:D83213; conserved hypothetical protein PA3453 [imported] -; E=1e-18 COG: yceH; COG3132 Uncharacterized BCR; E=1e-20 PFAM: PF01213; CAP protein; E=0.44 PF02465; Flagellar hook-associated protein 2; E=0.41 PF01519; Protein of unknown function DUF16; E=0.89; hypothetical protein complement(3467807..3468520) Rhodopirellula baltica SH 1 1795373 NP_867317.1 CDS aas NC_005027.1 3468775 3471075 D PMID: 8300626 best DB hits: BLAST: pir:A81368; probable 2-acylglycerophosphoethanolamine acyltransferase; E=2e-89 swissprot:P31119; AAS_ECOLI AAS BIFUNCTIONAL PROTEIN [INCLUDES:; E=5e-59 gb:AAG57948.1; AE005512_7 (AE005512); E=6e-59 COG: Cj0938c_3; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid; E=6e-66 aas_2; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases; E=6e-50 VNG1339C; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid; E=2e-28 PFAM: PF01553; Acyltransferase; E=7.6e-22 PF00501; AMP-binding enzyme; E=2.4e-07; 2-acyl-glycerophospho-ethanolamine acyltransferase 3468775..3471075 Rhodopirellula baltica SH 1 1792900 NP_867318.1 CDS RB6534 NC_005027.1 3471101 3471463 D hypothetical protein 3471101..3471463 Rhodopirellula baltica SH 1 1790960 NP_867319.1 CDS RB6535 NC_005027.1 3471113 3471451 R PMID: 12093901; hypothetical protein complement(3471113..3471451) Rhodopirellula baltica SH 1 1791312 NP_867320.1 CDS RB6536 NC_005027.1 3471483 3471704 R hypothetical protein complement(3471483..3471704) Rhodopirellula baltica SH 1 1792564 NP_867321.1 CDS galM NC_005027.1 3471736 3472890 R PMID: 3012466 best DB hits: BLAST: embl:CAB62739.1; (AL133423) aldose 1-epimerase; E=8e-92 pir:H72395; probable aldose 1-epimerase (EC 5.1.3.3) - Thermotoga; E=4e-85 swissprot:P05149; GALM_ACICA ALDOSE 1-EPIMERASE PRECURSOR; E=2e-80 COG: TM0282; COG2017 Galactose mutarotase and related enzymes; E=3e-86 PFAM: PF01263; Aldose 1-epimerase; E=3.1e-111; aldose 1-epimerase complement(3471736..3472890) Rhodopirellula baltica SH 1 1794134 NP_867322.1 CDS RB6538 NC_005027.1 3472930 3474693 R uncharacterized member of the SSS superfamily of sodium-dependent solute transporters; unknown function; symporter YidK complement(3472930..3474693) Rhodopirellula baltica SH 1 1796586 NP_867323.1 CDS RB6539 NC_005027.1 3474598 3475722 D hypothetical protein 3474598..3475722 Rhodopirellula baltica SH 1 1796931 NP_867324.1 CDS RB6542 NC_005027.1 3475795 3476964 D PMID: 8041620 best DB hits: BLAST: swissprot:P37390; XYLR_ECOLI XYLOSE OPERON REGULATORY PROTEIN; E=9e-48 swissprot:P45043; XYLR_HAEIN XYLOSE OPERON REGULATORY PROTEIN; E=1e-43 ddbj:BAB03212.1; (AB046360) xylose operon regulatory; E=8e-38 COG: xylR_1; COG1609 Transcriptional regulators; E=3e-25 xylR_2; COG2207 AraC-type DNA-binding domain-containing proteins; E=7e-17 PA2320; COG1609 Transcriptional regulators; E=4e-08 PFAM: PF00165; Bacterial regulatory helix-turn-heli; E=2.1e-20; xylose operon regulatory protein 3475795..3476964 Rhodopirellula baltica SH 1 1795179 NP_867325.1 CDS RB6546 NC_005027.1 3476892 3477143 R hypothetical protein complement(3476892..3477143) Rhodopirellula baltica SH 1 1794334 NP_867326.1 CDS RB6549 NC_005027.1 3477191 3478189 D hypothetical protein 3477191..3478189 Rhodopirellula baltica SH 1 1796765 NP_867327.1 CDS RB6551 NC_005027.1 3478197 3478328 D hypothetical protein 3478197..3478328 Rhodopirellula baltica SH 1 1794732 NP_867328.1 CDS prfB NC_005027.1 3478346 3479359 R PMID: 9537320 PMID: 3889910 best DB hits: BLAST: swissprot:O67695; RF2_AQUAE PEPTIDE CHAIN RELEASE FACTOR 2 (RF-2); E=3e-65 swissprot:P28367; RF2_BACSU PEPTIDE CHAIN RELEASE FACTOR 2 (RF-2); E=1e-64 pir:H82016; translation releasing factor RF-2 prfB NMA0224; E=3e-64 COG: aq_1840; COG1186 Protein chain release factor B; E=2e-66 PFAM: PF00213; ATP synthase delta (OSCP) subunit; E=0.085 PF00472; Peptidyl-tRNA hydrolase domain; E=3.4e-52; peptide chain release factor 2 complement(3478346..3479359) Rhodopirellula baltica SH 1 1794124 NP_867329.1 CDS RB6553 NC_005027.1 3479403 3479627 R hypothetical protein complement(3479403..3479627) Rhodopirellula baltica SH 1 1796951 NP_867330.1 CDS trmU NC_005027.1 3479573 3480772 D PMID: 10567266 best DB hits: BLAST: swissprot:Q9ZDM1; TRMU_RICPR PROBABLE TRNA; E=5e-62 pir:H75357; tRNA; E=2e-53 ddbj:BAB04980.1; (AP001511); E=7e-49 COG: RP306; COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate); E=5e-63 PFAM: PF00764; Arginosuccinate synthase; E=0.0016 PF02568; Thiamine biosynthesis protein; E=0.0039; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 3479573..3480772 Rhodopirellula baltica SH 1 1792744 NP_867331.1 CDS RB6556 NC_005027.1 3481050 3482471 R best DB hits: PFAM: PF00884; Sulfatase; E=0.0047; sulfatase complement(3481050..3482471) Rhodopirellula baltica SH 1 1792304 NP_867332.1 CDS RB6557 NC_005027.1 3482475 3485186 R hypothetical protein complement(3482475..3485186) Rhodopirellula baltica SH 1 1794393 NP_867333.1 CDS RB6559 NC_005027.1 3485306 3487090 R hypothetical protein complement(3485306..3487090) Rhodopirellula baltica SH 1 1790265 NP_867334.1 CDS RB6562 NC_005027.1 3487063 3487173 R hypothetical protein complement(3487063..3487173) Rhodopirellula baltica SH 1 1793905 NP_867335.1 CDS kdsA NC_005027.1 3487154 3488014 R catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase complement(3487154..3488014) Rhodopirellula baltica SH 1 1796955 NP_867336.1 CDS RB6566 NC_005027.1 3488195 3489184 R PMID: 11214968 best DB hits: BLAST: swissprot:P39074; BMRU_BACSU BMRU PROTEIN ----- pir: F69595; E=0.057 pir:H70861; hypothetical protein Rv2252 - Mycobacterium tuberculosis; E=0.26 pir:H69995; hypothetical protein ytlR - Bacillus subtilis -----; E=0.35; protein BmrU complement(3488195..3489184) Rhodopirellula baltica SH 1 1794347 NP_867337.1 CDS RB6567 NC_005027.1 3489185 3489298 R hypothetical protein complement(3489185..3489298) Rhodopirellula baltica SH 1 1790548 NP_867338.1 CDS RB6569 NC_005027.1 3489300 3489527 D hypothetical protein 3489300..3489527 Rhodopirellula baltica SH 1 1796945 NP_867339.1 CDS RB6571 NC_005027.1 3489550 3490014 D signal peptide 3489550..3490014 Rhodopirellula baltica SH 1 1795071 NP_867340.1 CDS RB6572 NC_005027.1 3490092 3491447 R signal peptide complement(3490092..3491447) Rhodopirellula baltica SH 1 1795174 NP_867341.1 CDS RB6574 NC_005027.1 3491444 3493615 R hypothetical protein complement(3491444..3493615) Rhodopirellula baltica SH 1 1793348 NP_867342.1 CDS RB6576 NC_005027.1 3493521 3493706 R hypothetical protein complement(3493521..3493706) Rhodopirellula baltica SH 1 1794513 NP_867343.1 CDS RB6577 NC_005027.1 3493739 3494956 D signal peptide 3493739..3494956 Rhodopirellula baltica SH 1 1793175 NP_867344.1 CDS RB6578 NC_005027.1 3495022 3495957 R best DB hits: PFAM: PF00036; EF hand; E=0.17; hypothetical protein complement(3495022..3495957) Rhodopirellula baltica SH 1 1790034 NP_867345.1 CDS RB6581 NC_005027.1 3496255 3498015 D hypothetical protein 3496255..3498015 Rhodopirellula baltica SH 1 1791635 NP_867346.1 CDS RB6583 NC_005027.1 3498012 3501002 D PMID: 9083068 best DB hits: BLAST: gb:AAA62535.1; (U21320) contains TPR domain-like repeats; E=0.14 gb:AAB63465.1; (U77412) O-linked GlcNAc transferase; E=0.14 PFAM: PF02836; Glycosyl hydrolases family 2,; E=0.12; O-linked GlcNAc transferase 3498012..3501002 Rhodopirellula baltica SH 1 1794554 NP_867347.1 CDS RB6586 NC_005027.1 3501011 3501631 R best DB hits: BLAST: pir:C75548; hypothetical protein - Deinococcus radiodurans (strain; E=0.005; hypothetical protein complement(3501011..3501631) Rhodopirellula baltica SH 1 1796952 NP_867348.1 CDS RB6587 NC_005027.1 3501595 3501747 R hypothetical protein complement(3501595..3501747) Rhodopirellula baltica SH 1 1795628 NP_867349.1 CDS punA NC_005027.1 3501744 3502583 R catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase complement(3501744..3502583) Rhodopirellula baltica SH 1 1792172 NP_867350.1 CDS RB6590 NC_005027.1 3502687 3505149 D PMID: 9524235 best DB hits: BLAST: ddbj:BAA25303.1; (AB003477) hypothetical protein [Synechococcus; E=4e-04 pir:A75469; conserved hypothetical protein - Deinococcus radiodurans; E=0.099 gb:AAK03519.1; (AE006180) unknown [Pasteurella multocida]; E=0.37 COG: DR0837; COG0433 Predicted ATPase; E=0.009; ATP-binding protein 3502687..3505149 Rhodopirellula baltica SH 1 1796172 NP_867351.1 CDS RB6593 NC_005027.1 3505079 3505396 D hypothetical protein 3505079..3505396 Rhodopirellula baltica SH 1 1793401 NP_867352.1 CDS RB6595 NC_005027.1 3505469 3506173 R best DB hits: BLAST: gb:AAF58230.1; (AE003814) CG12864 gene product [Drosophila; E=0.58; signal peptide complement(3505469..3506173) Rhodopirellula baltica SH 1 1792238 NP_867353.1 CDS RB6594 NC_005027.1 3505472 3506359 D hypothetical protein 3505472..3506359 Rhodopirellula baltica SH 1 1794656 NP_867354.1 CDS RB6596 NC_005027.1 3506375 3507067 R hypothetical protein complement(3506375..3507067) Rhodopirellula baltica SH 1 1792119 NP_867355.1 CDS RB6599 NC_005027.1 3507362 3508939 D PMID: 7910580 best DB hits: BLAST: embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=1e-38 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=6e-38 pdb:1E2S; P Chain P, Crystal Structure Of An Arylsulfatase A; E=1e-37 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=2e-29 PFAM: PF00884; Sulfatase; E=6.7e-42; arylsulfatase 3507362..3508939 Rhodopirellula baltica SH 1 1791953 NP_867356.1 CDS RB6603 NC_005027.1 3508951 3509955 D PMID: 8997703 best DB hits: BLAST: pir:C75037; methanol dehydrogenase regulatory protein (moxr-3); E=9e-65 pir:E70792; probable regulatory protein - Mycobacterium tuberculosis; E=2e-64 pir:B71126; hypothetical protein PH0776 - Pyrococcus horikoshii; E=2e-63 COG: PAB0848; COG0714 MoxR-like ATPases; E=9e-66 PFAM: PF00004; ATPase associated with; E=6.4e-06 PF02223; Thymidylate kinase; E=0.36 PF01078; Magnesium chelatase, subunit; E=4.3e-05; methanol dehydrogenase regulatory protein (MoxR) 3508951..3509955 Rhodopirellula baltica SH 1 1795024 NP_867357.1 CDS RB6605 NC_005027.1 3510029 3510748 D PMID: 1644792 best DB hits: BLAST: gb:AAA36453.1; (M95678) phospholipase C-beta-2 [Homo sapiens]; E=2e-04 gb:AAG51636.1; AC018908_2 (AC018908) unknown protein; 69131-60853; E=0.001 pir:F71318; conserved hypothetical protein TP0494 - syphilis; E=0.001 COG: TP0494; COG1579 Zn-ribbon protein, possibly nucleic acid-binding; E=1e-04 NMB1472; COG0542 ATPases with chaperone activity, ATP-binding domain; E=0.008 PFAM: PF02591; Uncharacterized ACR, COG1579; E=0.88; phospholipase C-beta-2 3510029..3510748 Rhodopirellula baltica SH 1 1796976 NP_867358.1 CDS RB6607 NC_005027.1 3510745 3511395 D PMID: 9784136 best DB hits: BLAST: pir:D75341; conserved hypothetical protein - Deinococcus radiodurans; E=3e-13 swissprot:O34932; YTAG_BACSU HYPOTHETICAL 22.0 KD PROTEIN IN; E=2e-12 pir:B71509; probable phosphatasekinase - Chlamydia trachomatis; E=5e-11 COG: DR1892; COG0237 Predicted nucleotide kinase; E=3e-14 PFAM: PF01583; Adenylylsulfate kinase; E=0.81 PF00485; Phosphoribulokinase / Uridine; E=0.0071 PF01121; Uncharacterized protein famil; E=1.1e-19; phosphatase/kinase 3510745..3511395 Rhodopirellula baltica SH 1 1790128 NP_867359.1 CDS RB6609 NC_005027.1 3511456 3511593 D hypothetical protein 3511456..3511593 Rhodopirellula baltica SH 1 1796968 NP_867360.1 CDS RB6610 NC_005027.1 3511694 3515401 D best DB hits: PFAM: PF00639; PPIC-type PPIASE domain.; E=0.81; hypothetical protein 3511694..3515401 Rhodopirellula baltica SH 1 1793720 NP_867361.1 CDS RB6615 NC_005027.1 3515430 3516122 D PMID: 8843436 best DB hits: BLAST: embl:CAB94634.1; (AL359215) secreted glycosyl hydrolase.; E=1e-12 pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=3e-11 pir:T35028; probable glycosyl hydrolase - Streptomyces coelicolor; E=0.054; secreted glycosyl hydrolase 3515430..3516122 Rhodopirellula baltica SH 1 1792498 NP_867362.1 CDS purD NC_005027.1 3516064 3517428 D PMID: 8299947 best DB hits: BLAST: pir:T46882; phosphoribosylamine--glycine ligase (EC 6.3.4.13); E=1e-108 pir:I67805; purine synthesis multifunctional protein - mouse -----; E=1e-108 gb:AAC53250.1; (U20892) glycinamide ribonucleotide synthetase; E=1e-107 COG: BH0634; COG0151 Phosphoribosylamine-glycine ligase; E=1e-108 PFAM: PF02844; Phosphoribosylglycinamide syn; E=6.3e-55 PF02842; Phosphoribosylglycinamide syn; E=2.5e-30 PF01837; Domain of unknown function DU; E=0.23; phosphoribosylamine-glycine ligase 3516064..3517428 Rhodopirellula baltica SH 1 1795089 NP_867363.1 CDS RB6619 NC_005027.1 3517503 3518291 R hypothetical protein complement(3517503..3518291) Rhodopirellula baltica SH 1 1790480 NP_867364.1 CDS ppiD NC_005027.1 3518213 3519400 R PMID: 10710307 PMID: 9670013 best DB hits: BLAST: gb:AAK04063.1; (AE006234) unknown [Pasteurella multocida]; E=2e-06 pir:A81794; probable rotamase NMA2206 [imported] - Neisseria; E=7e-05 pir:B81216; peptidyl-prolyl cis-trans isomerase NMB0281 [imported] -; E=1e-04 COG: NMB0281; COG0760 Parvulin-like peptidyl-prolyl isomerase; E=1e-05 PFAM: PF00639; PPIC-type PPIASE domain.; E=0.0032; peptidyl-prolyl cis-trans isomerase complement(3518213..3519400) Rhodopirellula baltica SH 1 1792209 NP_867365.1 CDS nadC NC_005027.1 3519584 3520531 D PMID: 10910347 best DB hits: BLAST: pir:B82621; nicotinate-mononucleotide pyrophosphorylase XF1925; E=4e-45 swissprot:P77938; NADC_RHORU PROBABLE NICOTINATE-NUCLEOTIDE; E=4e-43 gb:AAG47789.1; AF311738_5 (AF311738) NadC [Mesorhizobium loti]; E=4e-39 COG: XF1925; COG0157 Nicotinate-nucleotide pyrophosphorylase; E=4e-46 PFAM: PF00364; Biotin-requiring enzyme; E=0.5 PF02749; Quinolinate phosphoribosyl tran; E=8.9e-16 PF01729; Quinolinate phosphoribosyl tran; E=1.1e-32; nicotinate-mononucleotide pyrophosphorylase 3519584..3520531 Rhodopirellula baltica SH 1 1790682 NP_867366.1 CDS RB6624 NC_005027.1 3520589 3522100 D PMID: 10952301 best DB hits: BLAST: pir:D82262; probable capsular polysaccharide biosynthesis; E=3e-87 gb:AAG57107.1; AE005430_7 (AE005430) colanic acid; E=4e-82 swissprot:P71241; WCAJ_ECOLI COLANIC BIOSYNTHESIS; E=5e-82 COG: VC0934; COG2148 Sugar transferases involved in lipopolysaccharide; E=3e-88 PFAM: PF02397; Bacterial sugar transferase; E=0.25; capsular polysaccharide biosynthesis glycosyltransferase 3520589..3522100 Rhodopirellula baltica SH 1 1792244 NP_867367.1 CDS RB6627 NC_005027.1 3522169 3522699 D hypothetical protein 3522169..3522699 Rhodopirellula baltica SH 1 1796753 NP_867368.1 CDS RB6628 NC_005027.1 3522700 3522840 D hypothetical protein 3522700..3522840 Rhodopirellula baltica SH 1 1794356 NP_867369.1 CDS RB6629 NC_005027.1 3522859 3524985 D PMID: 10360571 best DB hits: BLAST: pir:F72424; hypothetical protein - Thermotoga maritima (strain MSB8); E=0.28; hypothetical protein 3522859..3524985 Rhodopirellula baltica SH 1 1791007 NP_867370.1 CDS RB6632 NC_005027.1 3524963 3525130 D hypothetical protein 3524963..3525130 Rhodopirellula baltica SH 1 1791829 NP_867371.1 CDS RB6633 NC_005027.1 3525143 3525742 D hypothetical protein 3525143..3525742 Rhodopirellula baltica SH 1 1796971 NP_867372.1 CDS RB6634 NC_005027.1 3525785 3526882 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 3525785..3526882 Rhodopirellula baltica SH 1 1792051 NP_867373.1 CDS RB6636 NC_005027.1 3527005 3528306 D best DB hits: BLAST: gb:AAD45539.1; U70376_1 (U70376) InsA [Streptomyces netropsis]; E=5e-33 gb:AAG60893.1; AF322013_12 (AF322013) ID460 [Bradyrhizobium; E=8e-33 ddbj:BAA19966.1; (D63923) transposase [Acetobacter pasteurianus]; E=1e-26; transposase 3527005..3528306 Rhodopirellula baltica SH 1 1792448 NP_867374.1 CDS RB6637 NC_005027.1 3528317 3528469 D hypothetical protein 3528317..3528469 Rhodopirellula baltica SH 1 1792959 NP_867375.1 CDS RB6638 NC_005027.1 3528359 3528514 R hypothetical protein complement(3528359..3528514) Rhodopirellula baltica SH 1 1793505 NP_867376.1 CDS RB6639 NC_005027.1 3528517 3529980 R hypothetical protein complement(3528517..3529980) Rhodopirellula baltica SH 1 1797032 NP_867377.1 CDS RB6643 NC_005027.1 3529970 3530587 R PMID: 7961421 best DB hits: BLAST: gb:AAF01335.1; AF190580_1 (AF190580) alternate sigma factor AlgT; E=2e-09 pir:A69872; RNA polymerase ECF-type sigma factor homolog ylaC -; E=2e-09 swissprot:Q06198; RPSH_PSEAE RNA POLYMERASE SIGMA-H FACTOR; E=2e-09 COG: BS_ylaC; COG1595 DNA-directed RNA polymerase specialized sigma; E=2e-10 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=5.5e-14; RNA polymerase ECF-type sigma factor complement(3529970..3530587) Rhodopirellula baltica SH 1 1795224 NP_867378.1 CDS RB6644 NC_005027.1 3530698 3534084 R PMID: 10684935 best DB hits: BLAST: gb:AAF73522.1; (AE002272) serinethreonine-protein kinase; E=6e-05 pir:E71486; probable st protein kinase - Chlamydia trachomatis; E=3e-04 swissprot:P54737; PKN5_MYXXA SERINETHREONINE-PROTEIN KINASE PKN5; E=0.001 COG: CT673; COG0515 Serine/threonine protein kinases; E=3e-05 PFAM: PF00069; Protein kinase domain; E=0.21; serine/threonine-protein kinase complement(3530698..3534084) Rhodopirellula baltica SH 1 1795809 NP_867379.1 CDS RB6653 NC_005027.1 3534121 3534261 R hypothetical protein complement(3534121..3534261) Rhodopirellula baltica SH 1 1793213 NP_867380.1 CDS glgA NC_005027.1 3534225 3535748 D PMID: 10360571 PMID: 3097003 best DB hits: BLAST: pir:H72321; glycogen synthase - Thermotoga maritima (strain MSB8); E=6e-79 gb:AAK04797.1; AE006303_3 (AE006303) glycogen synthase (EC; E=1e-77 swissprot:O08328; GLGA_BACST GLYCOGEN SYNTHASE (STARCH [BACTERIAL; E=2e-76 COG: TM0895; COG0297 Glycogen synthase; E=6e-80 BH1415_2; COG0438 Predicted glycosyltransferases; E=6e-10 PH0069; COG0297 Glycogen synthase; E=7e-09 PFAM: PF00534; Glycosyl transferases group 1; E=8.9e-10; glycogen synthase 3534225..3535748 Rhodopirellula baltica SH 1 1796909 NP_867381.1 CDS RB6655 NC_005027.1 3535719 3535829 R hypothetical protein complement(3535719..3535829) Rhodopirellula baltica SH 1 1791896 NP_867382.1 CDS galT NC_005027.1 3535887 3537278 D PMID: 10360571 best DB hits: BLAST: pir:A72322; hypothetical protein TM0896 - Thermotoga maritima; E=3e-47 ddbj:BAB09478.1; (AB012246) galactose-1-phosphate uridyl; E=1e-36 gb:AAF64398.1; AF148553_2 (AF148553) adenylylsulfate:phosphate; E=1e-35 COG: TM0896; COG1085 Galactose-1-phosphate uridylyltransferase; E=3e-48; galactose-1-phosphate uridylyltransferase 3535887..3537278 Rhodopirellula baltica SH 1 1796264 NP_867383.1 CDS RB6658 NC_005027.1 3537387 3538430 D signal peptide 3537387..3538430 Rhodopirellula baltica SH 1 1794853 NP_867384.1 CDS RB6661 NC_005027.1 3538486 3538752 R hypothetical protein complement(3538486..3538752) Rhodopirellula baltica SH 1 1794578 NP_867385.1 CDS RB6663 NC_005027.1 3538870 3540255 R PMID: 10360571 best DB hits: BLAST: pir:G72299; conserved hypothetical protein - Thermotoga maritima; E=0.001 gb:AAB88948.1; (AE000945) conserved hypothetical transmembrane; E=0.21 COG: TM1060; COG0477 Permeases of the major facilitator superfamily; E=1e-04; hypothetical protein complement(3538870..3540255) Rhodopirellula baltica SH 1 1792154 NP_867386.1 CDS RB6666 NC_005027.1 3540415 3541137 D hypothetical protein 3540415..3541137 Rhodopirellula baltica SH 1 1789950 NP_867387.1 CDS RB6667 NC_005027.1 3541134 3541280 D hypothetical protein 3541134..3541280 Rhodopirellula baltica SH 1 1796230 NP_867388.1 CDS RB6668 NC_005027.1 3541244 3543304 D PMID: 8843436 best DB hits: BLAST: pir:T36106; hypothetical protein SCE15.03c - Streptomyces coelicolor; E=3e-87 pir:A83179; conserved hypothetical protein PA3729 [imported] -; E=4e-73 gb:AAG58185.1; AE005534_7 (AE005534) membrane protein; E=2e-28 COG: PA3729; COG2268 Uncharacterized BCR; E=4e-74; hypothetical protein 3541244..3543304 Rhodopirellula baltica SH 1 1795107 NP_867389.1 CDS RB6669 NC_005027.1 3543307 3548661 D PMID: 10984043 best DB hits: BLAST: pir:D83181; hypothetical protein PA3728 [imported] - Pseudomonas; E=0.0 pir:T36105; probable large glycinealanine rich protein - Streptomyces; E=1e-165 pir:D75436; ATP-dependent Clp proteinase, ATP-binding subunit ClpC -; E=0.19 PFAM: PF00004; ATPase associated with; E=0.00026; hypothetical protein 3543307..3548661 Rhodopirellula baltica SH 1 1792719 NP_867390.1 CDS RB6670 NC_005027.1 3548700 3549818 D best DB hits: BLAST: pir:G82243; conserved hypothetical protein VC1079 [imported] -; E=1e-42 pir:F75007; sua5 related protein PAB1302 - Pyrococcus abyssi (strain; E=5e-41 embl:CAB57638.1; (Y18930) hypothetical protein [Sulfolobus; E=2e-39 COG: VC1079; COG0009 translation factor (SUA5); E=1e-43 PFAM: PF01300; SUA5/yciO/yrdC family; E=2.7e-50; translation factor 3548700..3549818 Rhodopirellula baltica SH 1 1791815 NP_867391.1 CDS RB6671 NC_005027.1 3549836 3550681 R PMID: 98151343 best DB hits: BLAST: gb:AAF55179.1; (AE003708) CG5038 gene product [Drosophila; E=4e-10 gb:AAF26789.1; AC016829_13 (AC016829) O-linked GlcNAc; E=4e-09 ddbj:BAB21885.1; (AB055261) hypothetical protein [Macaca; E=2e-08 COG: MTH72; COG0457 TPR-repeat-containing proteins; E=4e-07 PFAM: PF00515; TPR Domain; E=1.6e-05; hypothetical protein complement(3549836..3550681) Rhodopirellula baltica SH 1 1796643 NP_867392.1 CDS RB6676 NC_005027.1 3550668 3550829 R hypothetical protein complement(3550668..3550829) Rhodopirellula baltica SH 1 1791156 NP_867393.1 CDS RB6677 NC_005027.1 3550883 3551071 D hypothetical protein 3550883..3551071 Rhodopirellula baltica SH 1 1790533 NP_867394.1 CDS RB6678 NC_005027.1 3551127 3551480 D hypothetical protein 3551127..3551480 Rhodopirellula baltica SH 1 1793155 NP_867395.1 CDS RB6680 NC_005027.1 3551491 3551718 D PMID: 10731132 best DB hits: BLAST: gb:AAF57913.1; (AE003804) CG9642 gene product [Drosophila; E=0.032; hypothetical protein 3551491..3551718 Rhodopirellula baltica SH 1 1791762 NP_867396.1 CDS RB6681 NC_005027.1 3551775 3552194 D hypothetical protein 3551775..3552194 Rhodopirellula baltica SH 1 1797093 NP_867397.1 CDS gltA NC_005027.1 3552246 3553733 R PMID: 2337600 PMID: 6380576 best DB hits: BLAST: gb:AAF04133.1; AF191033_1 (AF191033) citrate synthase; E=1e-152 embl:CAB66275.1; (AL136519) citrate synthase. [Streptomyces; E=1e-149 swissprot:Q10530; CISY_MYCTU CITRATE SYNTHASE 1 ----- pir:; E=1e-145 COG: Rv0896; COG0372 Citrate synthase; E=1e-146 PFAM: PF00285; Citrate synthase; E=1e-208; citrate synthase complement(3552246..3553733) Rhodopirellula baltica SH 1 1795028 NP_867398.1 CDS RB6684 NC_005027.1 3553717 3554034 R hypothetical protein complement(3553717..3554034) Rhodopirellula baltica SH 1 1796318 NP_867399.1 CDS RB6685 NC_005027.1 3554047 3554265 R hypothetical protein complement(3554047..3554265) Rhodopirellula baltica SH 1 1791159 NP_867400.1 CDS RB6686 NC_005027.1 3554230 3555036 D PMID: 10484179 PMID: 9878437 best DB hits: BLAST: ddbj:BAB06876.1; (AP001517) two-component response regulator; E=9e-39 gb:AAG43239.1; AF123314_2 (AF123314) response regulator; E=5e-38 gb:AAG09797.1; AF258346_2 (AF258346) response regulator RegX3; E=7e-38 COG: BH3157; COG0745 Response regulators consisting of a CheY-like; E=9e-40 phoB; COG0745 Response regulators consisting of a CheY-like receiver; E=5e-31 BH1580; COG0745 Response regulators consisting of a CheY-like; E=1e-30 PFAM: PF00072; Response regulator receiver doma; E=8.3e-31 PF00486; Transcriptional regulatory prote; E=2.9e-24; two-component response regulator 3554230..3555036 Rhodopirellula baltica SH 1 1791800 NP_867401.1 CDS sodA NC_005027.1 3555061 3555747 D PMID: 1089067 PMID: 3520487 best DB hits: BLAST: pir:B75415; superoxide dismutase (EC 1.15.1.1) (Mn) DR1279; E=7e-82 ddbj:BAB05128.1; (AP001511) superoxide dismutase [Bacillus; E=3e-75 embl:CAA05291.1; (AJ002279) manganese superoxide dismutase; E=9e-75 COG: DR1279; COG0605 Superoxide dismutase; E=6e-83 PFAM: PF00081; Iron/manganese superoxide dismutases; E=2.4e-53 PF02777; Iron/manganese superoxide dismutases; E=5.3e-69; Mn family superoxide dismutase 3555061..3555747 Rhodopirellula baltica SH 1 1790303 NP_867402.2 CDS fba NC_005027.1 3555896 3556918 D class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 3555896..3556918 Rhodopirellula baltica SH 1 1797088 NP_867403.1 CDS RB6691 NC_005027.1 3556962 3557465 D hypothetical protein 3556962..3557465 Rhodopirellula baltica SH 1 1791066 NP_867404.1 CDS RB6693 NC_005027.1 3557535 3557960 D hypothetical protein 3557535..3557960 Rhodopirellula baltica SH 1 1791899 NP_867405.1 CDS RB6696 NC_005027.1 3557988 3558311 R hypothetical protein complement(3557988..3558311) Rhodopirellula baltica SH 1 1797010 NP_867406.1 CDS RB6697 NC_005027.1 3558301 3558933 R best DB hits: PFAM: PF01909; Nucleotidyltransferase domain; E=0.00053; hypothetical protein complement(3558301..3558933) Rhodopirellula baltica SH 1 1796587 NP_867407.1 CDS RB6698 NC_005027.1 3558935 3559774 R PMID: 10413667 best DB hits: BLAST: gb:AAD24810.1; (AF003958) unknown [Acinetobacter sp. SUN]; E=0.004 swissprot:P05530; MCBG_ECOLI MCBG PROTEIN ----- pir: S00837; E=0.17 pir:I50531; transmembrane transporter - electric ray (Discopyge; E=0.26 PFAM: PF00805; Pentapeptide repeats (8 copies); E=3.4e-05; hypothetical protein complement(3558935..3559774) Rhodopirellula baltica SH 1 1790082 NP_867408.1 CDS RB6699 NC_005027.1 3559781 3559924 D hypothetical protein 3559781..3559924 Rhodopirellula baltica SH 1 1792190 NP_867409.1 CDS RB6701 NC_005027.1 3559944 3560207 D hypothetical protein 3559944..3560207 Rhodopirellula baltica SH 1 1795919 NP_867410.1 CDS RB6702 NC_005027.1 3560183 3560371 R hypothetical protein complement(3560183..3560371) Rhodopirellula baltica SH 1 1792252 NP_867411.1 CDS RB6703 NC_005027.1 3560295 3560822 R hypothetical protein complement(3560295..3560822) Rhodopirellula baltica SH 1 1793723 NP_867412.1 CDS RB6706 NC_005027.1 3560829 3560942 R hypothetical protein complement(3560829..3560942) Rhodopirellula baltica SH 1 1794125 NP_867413.1 CDS RB6707 NC_005027.1 3561015 3562985 R PMID: 6268937 best DB hits: BLAST: swissprot:P03835; YI41_ECOLI INSERTION ELEMENT IS4 HYPOTHETICAL; E=0.003 gb:AAC72261.1; (U91581) transposase [Lactococcus lactis; E=0.010 gb:AAF27554.1; (AF179847) transposase [Lactococcus; E=0.010 COG: yi41; COG3385 Predicted transposase; E=2e-04 PFAM: PF01609; Transposase (IS4 family); E=0.024; transposase complement(3561015..3562985) Rhodopirellula baltica SH 1 1797059 NP_867414.1 CDS RB6708 NC_005027.1 3562975 3563853 R PMID: 7496528 best DB hits: BLAST: gb:AAA88919.1; (U13013) ORFB [Leptospira interrogans]; E=5e-47 gb:AAA88916.1; (U13012) ORFB [Leptospira interrogans]; E=2e-46 gb:AAC05649.1; (AF038931) probable transposase-related protein; E=8e-46 COG: tra5_g4; COG2801 transposase; E=2e-35 PFAM: PF00665; Integrase core domain; E=4.8e-40; transposase complement(3562975..3563853) Rhodopirellula baltica SH 1 1793452 NP_867415.1 CDS RB6709 NC_005027.1 3563856 3564146 R PMID: 2824781 best DB hits: BLAST: gb:AAG58100.1; AE005527_3 (AE005527) unknown protein encoded by; E=0.002 gb:AAG53987.1; AF327445_1 (AF327445) transposase A; E=0.003 gb:AAF28119.1; AF153317_15 (AF153317) InsA [Shigella; E=0.007 COG: PA1937; COG2963 Transposase; E=0.004 PFAM: PF01381; Helix-turn-helix; E=0.53 PF01527; Transposase; E=6.1e-18; transposase A complement(3563856..3564146) Rhodopirellula baltica SH 1 1791544 NP_867416.1 CDS RB6711 NC_005027.1 3564510 3564737 R hypothetical protein complement(3564510..3564737) Rhodopirellula baltica SH 1 1791948 NP_867417.1 CDS RB6712 NC_005027.1 3564597 3564908 D hypothetical protein 3564597..3564908 Rhodopirellula baltica SH 1 1795792 NP_867418.1 CDS RB6713 NC_005027.1 3564826 3565773 R hypothetical protein complement(3564826..3565773) Rhodopirellula baltica SH 1 1791983 NP_867419.1 CDS RB6716 NC_005027.1 3565803 3567209 R PMID: 1535622 best DB hits: BLAST: pir:F71205; hypothetical protein PH1912 - Pyrococcus horikoshii; E=3e-37 pir:F72315; conserved hypothetical protein - Thermotoga maritima; E=4e-37 pir:C75019; transport protein PAB1107 - Pyrococcus abyssi (strain; E=3e-36 COG: PH1912; COG1055 Na+/H+ antiporter NhaD and related arsenite; E=3e-38 arsB; COG1055 Na+/H+ antiporter NhaD and related arsenite permeases; E=6e-14 BH2999; COG1055 Na+/H+ antiporter NhaD and related arsenite; E=4e-13; transport protein- arsenite transport complement(3565803..3567209) Rhodopirellula baltica SH 1 1790181 NP_867420.1 CDS RB6719 NC_005027.1 3567413 3567772 R hypothetical protein complement(3567413..3567772) Rhodopirellula baltica SH 1 1792486 NP_867421.1 CDS RB6720 NC_005027.1 3567752 3567970 D hypothetical protein 3567752..3567970 Rhodopirellula baltica SH 1 1794842 NP_867422.1 CDS RB6722 NC_005027.1 3568026 3569195 R best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide complement(3568026..3569195) Rhodopirellula baltica SH 1 1796766 NP_867423.1 CDS RB6724 NC_005027.1 3569189 3569584 D hypothetical protein 3569189..3569584 Rhodopirellula baltica SH 1 1794741 NP_867424.1 CDS RB6725 NC_005027.1 3569667 3570638 R PMID: 9464382 best DB hits: BLAST: gb:AAC38151.1; (AF034088) lipase [Pseudomonas sp. B11-1]; E=4e-34 ddbj:BAA82510.1; (AB029896) esterase HDE [petroleum-degrading; E=3e-33 gb:AAB89533.1; (AE000985) carboxylesterase (estA) [Archaeoglobus; E=2e-30 COG: AF1716; COG0657 Acetyl esterase; E=2e-31 PFAM: PF00135; Carboxylesterase; E=0.75 PF00326; Prolyl oligopeptidase; E=0.72 PF00561; alpha/beta hydrolase fold; E=0.27; lipase complement(3569667..3570638) Rhodopirellula baltica SH 1 1796093 NP_867425.1 CDS RB6728 NC_005027.1 3570581 3570922 D hypothetical protein 3570581..3570922 Rhodopirellula baltica SH 1 1797017 NP_867426.1 CDS deoC NC_005027.1 3570858 3571640 D catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 3570858..3571640 Rhodopirellula baltica SH 1 1790859 NP_867427.1 CDS RB6730 NC_005027.1 3571668 3573215 R hypothetical protein complement(3571668..3573215) Rhodopirellula baltica SH 1 1792845 NP_867428.1 CDS RB6731 NC_005027.1 3573171 3573812 D hypothetical protein 3573171..3573812 Rhodopirellula baltica SH 1 1796655 NP_867429.1 CDS tolB NC_005027.1 3573460 3576996 D PMID: 1683466 PMID: 8550462 best DB hits: BLAST: swissprot:O84604; TOLB_CHLTR TOLB PROTEIN PRECURSOR ----- pir:; E=0.006 pir:F81653; tolB protein, probable TC0888 [imported] - Chlamydia; E=0.014 pir:E75551; probable acyl-peptide hydrolase - Deinococcus radiodurans; E=0.020 COG: CT599; COG0823 Periplasmic component of the Tol biopolymer transport; E=5e-04 DR0165; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; E=0.002 HI0382; COG0823 Periplasmic component of the Tol biopolymer transport; E=0.005; TolB protein, protein/colicin/DNA uptake system 3573460..3576996 Rhodopirellula baltica SH 1 1794039 NP_867430.1 CDS RB6734 NC_005027.1 3577198 3577353 R hypothetical protein complement(3577198..3577353) Rhodopirellula baltica SH 1 1793581 NP_867431.1 CDS RB6735 NC_005027.1 3577388 3577540 R hypothetical protein complement(3577388..3577540) Rhodopirellula baltica SH 1 1794566 NP_867432.1 CDS RB6736 NC_005027.1 3577551 3578852 R best DB hits: BLAST: gb:AAD45539.1; U70376_1 (U70376) InsA [Streptomyces netropsis]; E=5e-33 gb:AAG60893.1; AF322013_12 (AF322013) ID460 [Bradyrhizobium; E=8e-33 ddbj:BAA19966.1; (D63923) transposase [Acetobacter pasteurianus]; E=1e-26; transposase complement(3577551..3578852) Rhodopirellula baltica SH 1 1794104 NP_867433.1 CDS RB6738 NC_005027.1 3579027 3579389 D hypothetical protein 3579027..3579389 Rhodopirellula baltica SH 1 1796140 NP_867434.1 CDS RB6740 NC_005027.1 3579474 3580466 D PMID: 9639599 best DB hits: BLAST: gb:AAC05180.1; (U74652) nonspecific acid phosphatase precursor; E=1e-105 PFAM: PF00702; haloacid dehalogenase-like hydr; E=0.0014; nonspecific acid phosphatase precursor 3579474..3580466 Rhodopirellula baltica SH 1 1791248 NP_867435.1 CDS RB6742 NC_005027.1 3580591 3583347 R hypothetical protein complement(3580591..3583347) Rhodopirellula baltica SH 1 1791155 NP_867436.1 CDS RB6745 NC_005027.1 3583390 3583503 R hypothetical protein complement(3583390..3583503) Rhodopirellula baltica SH 1 1794067 NP_867437.1 CDS RB6746 NC_005027.1 3583522 3584742 R PMID: 8843436 best DB hits: BLAST: gb:AAC82905.1; (AF016485) ORF H1434 [Halobacterium sp. NRC-1]; E=1e-29 embl:CAB61860.1; (AL133252) methyltransferase; E=5e-24 gb:AAF00618.1; AF166383_1 (AF166383) methyltransferase [Mus; E=3e-19 COG: slr0303; COG0500 SAM-dependent methyltransferases; E=1e-13 VC0083; COG2226 Methylase involved in ubiquinone/menaquinone; E=1e-07 VNG1280C; COG0500 SAM-dependent methyltransferases; E=0.001 PFAM: PF01209; ubiE/COQ5 methyltransferase f; E=0.026; methyltransferase complement(3583522..3584742) Rhodopirellula baltica SH 1 1797056 NP_867438.1 CDS RB6747 NC_005027.1 3584705 3585703 R PMID: 8905231 best DB hits: BLAST: pir:S76979; hypothetical protein - Synechocystis sp. (strain PCC; E=3e-56 embl:CAC24148.1; (AL512973) Hypothetical protein [Sulfolobus; E=5e-05 pir:C83581; heme d1 biosynthesis protein NirJ PA0511 [imported] -; E=0.016 COG: slr0304; COG0535 Predicted Fe-S oxidoreductases; E=3e-57; Fe-S oxidoreductase complement(3584705..3585703) Rhodopirellula baltica SH 1 1791095 NP_867439.1 CDS RB6749 NC_005027.1 3585763 3586152 R PMID: 7540906; hypothetical protein complement(3585763..3586152) Rhodopirellula baltica SH 1 1796222 NP_867440.1 CDS clpC NC_005027.1 3586111 3588690 D PMID: 8016066 best DB hits: BLAST: pir:T36384; probable ATP-binding proteinase - Streptomyces; E=0.0 swissprot:P37571; CLPC_BACSU NEGATIVE REGULATOR OF GENETIC; E=0.0 ddbj:BAB03822.1; (AP001507) class III stress response-related; E=0.0 COG: BS_clpC; COG0542 ATPases with chaperone activity, ATP-binding domain; E=0.0 PFAM: PF02861; Clp amino terminal domain; E=7.5e-19 PF00004; ATPase associated with; E=1.6e-12 PF02151; UvrB/uvrC motif; E=2.3e-09; negative regulator of genetic competence ClpC/MecB 3586111..3588690 Rhodopirellula baltica SH 1 1791420 NP_867441.1 CDS pabB NC_005027.1 3588713 3590266 D PMID: 3057324 best DB hits: BLAST: gb:AAG61067.1; AF322013_186 (AF322013) ID893 [Bradyrhizobium; E=7e-72 swissprot:P12679; PABB_KLEAE PARA-AMINOBENZOATE SYNTHASE COMPONENT; E=4e-59 gb:AAG56801.1; AE005404_4 (AE005404) p-aminobenzoate synthetase,; E=2e-57 COG: pabB; COG0147 Anthranilate/para-aminobenzoate synthases component I; E=4e-58 VC1303; COG0147 Anthranilate/para-aminobenzoate synthases component; E=4e-57 VNG0384G; COG0147 Anthranilate/para-aminobenzoate synthases; E=1e-45 PFAM: PF00425; chorismate binding enzyme; E=2.4e-103; para-aminobenzoate synthase component I 3588713..3590266 Rhodopirellula baltica SH 1 1795299 NP_867442.1 CDS RB6755 NC_005027.1 3590294 3592045 R Catalyzes the specific recognition and activation of amino acids during peptide synthesis; peptide synthase complement(3590294..3592045) Rhodopirellula baltica SH 1 1797006 NP_867443.1 CDS rimK NC_005027.1 3592032 3593075 R PMID: 2570347 best DB hits: BLAST: gb:AAG32952.1; (AF032114) unknown [Methylobacterium extorquens]; E=3e-16 swissprot:Q58037; Y620_METJA HYPOTHETICAL PROTEIN MJ0620 -----; E=5e-15 pir:T43945; ribosomal protein S6 modification protein [imported] -; E=3e-13 COG: MJ0620; COG0189 Glutathione synthase/Ribosomal protein S6; E=5e-16 rimK; COG0189 Glutathione synthase/Ribosomal protein S6 modification; E=1e-11 VC2281; COG0189 Glutathione synthase/Ribosomal protein S6; E=3e-11 PFAM: PF02222; ATP-grasp domain; E=7.4e-06; ribosomal protein S6 modification protein complement(3592032..3593075) Rhodopirellula baltica SH 1 1794723 NP_867444.1 CDS mch NC_005027.1 3593021 3594022 R catalyzes the reversible formation of methenyl-H(4)methanopterin from N(5)-formyl-H(4)methanopterin; N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase complement(3593021..3594022) Rhodopirellula baltica SH 1 1792000 NP_867445.1 CDS RB6761 NC_005027.1 3594163 3594759 D PMID: 99209008 best DB hits: BLAST: ddbj:BAB04667.1; (AP001510) bacterioferritin comigratory protein; E=0.003 pir:S74867; hypothetical protein sll1159 - Synechocystis sp. (strain; E=0.010 pir:G81021; thioredoxin, probable NMB1958 [imported] - Neisseria; E=0.029 COG: BH0948; COG1225 Peroxiredoxins; E=3e-04 NMB1958; COG0526 Thiol-disulfide isomerase and thioredoxins; E=0.003 PFAM: PF00578; AhpC/TSA family; E=0.21; peroxiredoxin 3594163..3594759 Rhodopirellula baltica SH 1 1796045 NP_867446.1 CDS RB6763 NC_005027.1 3594756 3595832 D best DB hits: BLAST: pir:T13482; hypothetical protein 34F3.5 - fruit fly (Drosophila; E=0.007 swissprot:P41949; YLK1_CAEEL HYPOTHETICAL 48.2 KD PROTEIN D1044.1; E=0.060 pir:T22412; hypothetical protein F49C12.7 - Caenorhabditis elegans; E=0.18; hypothetical protein 3594756..3595832 Rhodopirellula baltica SH 1 1793399 NP_867447.1 CDS RB6765 NC_005027.1 3595880 3597370 D PMID: 8020961 best DB hits: BLAST: gb:AAF30402.1; AF109924_1 (AF109924) sulfatase 1 precursor [Helix; E=1e-39 ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=2e-39 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=3e-39 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=1e-33 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=8e-11 Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=9e-11 PFAM: PF00884; Sulfatase; E=1.9e-44; N-acetylgalactosamine 6-sulfate sulfatase (GALNS) 3595880..3597370 Rhodopirellula baltica SH 1 1796523 NP_867448.1 CDS RB6766 NC_005027.1 3597367 3597534 D hypothetical protein 3597367..3597534 Rhodopirellula baltica SH 1 1797029 NP_867449.1 CDS pcrA NC_005027.1 3597576 3599591 R PMID: 10192928 PMID: 3029683 best DB hits: BLAST: ddbj:BAB04367.1; (AP001509) ATP-dependent DNA helicase [Bacillus; E=1e-121 swissprot:Q53727; PCRA_STAAU ATP-DEPENDENT DNA HELICASE PCRA; E=1e-115 swissprot:P56255; PCRA_BACST ATP-DEPENDENT DNA HELICASE PCRA; E=1e-114 COG: BH0648; COG0210 Superfamily I DNA and RNA helicases; E=1e-122 PFAM: PF00580; UvrD/REP helicase; E=5.6e-173; ATP-dependent DNA helicase complement(3597576..3599591) Rhodopirellula baltica SH 1 1796132 NP_867450.1 CDS rpmA NC_005027.1 3599617 3599862 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(3599617..3599862) Rhodopirellula baltica SH 1 1796296 NP_867451.1 CDS RB6771 NC_005027.1 3599921 3600991 R hypothetical protein complement(3599921..3600991) Rhodopirellula baltica SH 1 1795969 NP_867452.1 CDS RB6774 NC_005027.1 3601004 3602617 R hypothetical protein complement(3601004..3602617) Rhodopirellula baltica SH 1 1791058 NP_867453.1 CDS RB6776 NC_005027.1 3602594 3602776 D hypothetical protein 3602594..3602776 Rhodopirellula baltica SH 1 1791102 NP_867454.1 CDS RB6777 NC_005027.1 3602786 3603199 D hypothetical protein 3602786..3603199 Rhodopirellula baltica SH 1 1795857 NP_867455.1 CDS RB6778 NC_005027.1 3603142 3603321 D hypothetical protein 3603142..3603321 Rhodopirellula baltica SH 1 1790870 NP_867456.1 CDS RB6780 NC_005027.1 3603381 3605054 D PMID: 7489918 best DB hits: BLAST: ddbj:BAA76622.1; (AB019194) RpoT [Mycobacterium leprae]; E=2e-26 ddbj:BAA76621.1; (AB019193) RpoT [Mycobacterium leprae]; E=2e-26 pir:S61292; transcription initiation factor sigma mysA -; E=4e-26 COG: Rv2703; COG0568 DNA-directed RNA polymerase sigma subunits; E=1e-26 PFAM: PF00140; Sigma-70 factor; E=7.7e-20; sigma-70 factor 3603381..3605054 Rhodopirellula baltica SH 1 1793389 NP_867457.1 CDS RB6781 NC_005027.1 3605138 3606571 D PMID: 9736747 best DB hits: BLAST: pir:E83642; choline sulfatase PA0031 [imported] - Pseudomonas; E=2e-25 gb:AAF72520.1; AF248951_1 (AF248951) mucin-desulfating sulfatase; E=3e-24 swissprot:P31447; YIDJ_ECOLI SULFATASE YIDJ -----; E=3e-24 COG: PA0031; COG3119 Arylsulfatase A and related enzymes; E=2e-26 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=3e-08 ydeN; COG3119 Arylsulfatase A and related enzymes; E=2e-07 PFAM: PF00884; Sulfatase; E=3.3e-13; choline sulfatase 3605138..3606571 Rhodopirellula baltica SH 1 1796638 NP_867458.1 CDS RB6782 NC_005027.1 3606608 3606796 D hypothetical protein 3606608..3606796 Rhodopirellula baltica SH 1 1795432 NP_867459.1 CDS RB6783 NC_005027.1 3606725 3606901 R hypothetical protein complement(3606725..3606901) Rhodopirellula baltica SH 1 1794222 NP_867460.1 CDS RB6784 NC_005027.1 3606809 3606922 D hypothetical protein 3606809..3606922 Rhodopirellula baltica SH 1 1797086 NP_867461.1 CDS RB6785 NC_005027.1 3607173 3607283 R hypothetical protein complement(3607173..3607283) Rhodopirellula baltica SH 1 1790262 NP_867462.1 CDS RB6786 NC_005027.1 3607257 3607775 D hypothetical protein 3607257..3607775 Rhodopirellula baltica SH 1 1790600 NP_867463.1 CDS RB6787 NC_005027.1 3607369 3607881 R hypothetical protein complement(3607369..3607881) Rhodopirellula baltica SH 1 1793156 NP_867464.1 CDS RB6789 NC_005027.1 3607945 3608487 R hypothetical protein complement(3607945..3608487) Rhodopirellula baltica SH 1 1795994 NP_867465.1 CDS RB6790 NC_005027.1 3608420 3608677 R hypothetical protein complement(3608420..3608677) Rhodopirellula baltica SH 1 1792341 NP_867466.1 CDS RB6791 NC_005027.1 3608668 3608910 R hypothetical protein complement(3608668..3608910) Rhodopirellula baltica SH 1 1795055 NP_867467.1 CDS RB6792 NC_005027.1 3608757 3608918 R hypothetical protein complement(3608757..3608918) Rhodopirellula baltica SH 1 1791165 NP_867468.1 CDS RB6793 NC_005027.1 3608962 3610014 R best DB hits: BLAST: pir:F75057; hypothetical protein PAB2381 - Pyrococcus abyssi (strain; E=2e-13 pir:E71174; hypothetical protein PH0593 - Pyrococcus horikoshii; E=2e-06 pir:F72219; conserved hypothetical protein - Thermotoga maritima; E=1e-04 COG: PAB2381; COG0697 Predicted permeases; E=2e-14 PFAM: PF00892; Integral membrane protein DUF6; E=5.2e-12; permease complement(3608962..3610014) Rhodopirellula baltica SH 1 1790434 NP_867469.1 CDS RB6795 NC_005027.1 3610027 3611334 R hypothetical protein complement(3610027..3611334) Rhodopirellula baltica SH 1 1791518 NP_867470.1 CDS RB6796 NC_005027.1 3611421 3613448 R hypothetical protein complement(3611421..3613448) Rhodopirellula baltica SH 1 1790841 NP_867471.1 CDS RB6799 NC_005027.1 3613537 3614721 D hypothetical protein 3613537..3614721 Rhodopirellula baltica SH 1 1790662 NP_867472.1 CDS RB6802 NC_005027.1 3614718 3615578 D PMID: 7751271 best DB hits: BLAST: swissprot:P50199; GNO_GLUOX GLUCONATE 5-DEHYDROGENASE; E=9e-23 swissprot:P39345; IDNO_ECOLI GLUCONATE 5-DEHYDROGENASE; E=4e-22 embl:CAC11881.1; (AL445065) glucose 1-dehydrogenase related; E=3e-21 COG: idnO; COG1028 Dehydrogenases with different specificities (related; E=4e-23 DRA0200; COG1028 Dehydrogenases with different specificities; E=5e-22 BH0938; COG1028 Dehydrogenases with different specificities (related; E=7e-20 PFAM: PF00106; short chain dehydrogenase; E=1e-43; gluconate 5-dehydrogenase 3614718..3615578 Rhodopirellula baltica SH 1 1797095 NP_867473.1 CDS RB6807 NC_005027.1 3615617 3617815 D PMID: 8918804 best DB hits: BLAST: embl:CAA67214.1; (X98625) sialic acid-specific 9-O-acetylesterase; E=5e-31 gb:AAB07813.1; (U40408) sialic-acid O-acetylesterase [Mus; E=9e-31 gb:AAD55976.1; (AF156856) cytosolic sialic acid; E=5e-28; sialic acid-specific 9-O-acetylesterase 3615617..3617815 Rhodopirellula baltica SH 1 1792173 NP_867474.1 CDS gcvH NC_005027.1 3617968 3618576 R PMID: 8552027 best DB hits: BLAST: swissprot:O86566; GCSH_STRCO PROBABLE GLYCINE CLEAVAGE SYSTEM H; E=1e-15 swissprot:Q50607; GCSH_MYCTU PROBABLE GLYCINE CLEAVAGE SYSTEM H; E=6e-12 swissprot:P25855; GCSH_ARATH GLYCINE CLEAVAGE SYSTEM H PROTEIN 1,; E=7e-12 COG: Rv1826; COG0509 Glycine cleavage system H protein (lipoate-binding); E=6e-13 VNG1605G; COG0509 Glycine cleavage system H protein; E=1e-12 gcvH; COG0509 Glycine cleavage system H protein (lipoate-binding); E=2e-12 PFAM: PF01597; Glycine cleavage H-protein; E=8.4e-12; glycine cleavage system H protein 1 complement(3617968..3618576) Rhodopirellula baltica SH 1 1792248 NP_867475.1 CDS thiL NC_005027.1 3618500 3619450 R PMID: 9202461 best DB hits: BLAST: ddbj:BAA19714.1; (D88802) H. influenzae hypothetical protein; E=5e-27 swissprot:O05514; THIL_BACSU THIAMINE-MONOPHOSPHATE KINASE; E=5e-27 ddbj:BAB04263.1; (AP001508) thiamin-monophosphate kinase; E=2e-26 COG: BS_ydiA; COG0611 Thiamine monophosphate kinase; E=4e-28 MTH1864; COG2144 Selenophosphate synthetase-related proteins; E=2e-06 AF0733; COG0611 Thiamine monophosphate kinase; E=3e-06 PFAM: PF00586; AIR synthase related protein, N-; E=5e-06 PF02769; AIR synthase related protein, C-; E=6.4e-05; thiamine-monophosphate kinase complement(3618500..3619450) Rhodopirellula baltica SH 1 1795848 NP_867476.1 CDS RB6812 NC_005027.1 3619552 3619704 R hypothetical protein complement(3619552..3619704) Rhodopirellula baltica SH 1 1792454 NP_867477.1 CDS dipZ NC_005027.1 3619749 3620915 R PMID: 9634230 best DB hits: BLAST: swissprot:Q10801; DIPZ_MYCTU DIPZ PROTEIN ----- pir: E70923; E=2e-18 embl:CAB58305.1; (AL121854) hypothetical protein SCJ33.06c; E=2e-11 gb:AAF45468.2; (AE002760) CG12547 gene product [Drosophila; E=2e-09 COG: Rv2874_2; COG0526 Thiol-disulfide isomerase and thioredoxins; E=2e-19 Rv2521; COG1225 Peroxiredoxins; E=0.007 DR2242; COG0450 Thiol - alkyl hydroperoxide reductases; E=0.009; DipZ protein, thioredoxin related to cytochrome c complement(3619749..3620915) Rhodopirellula baltica SH 1 1792530 NP_867478.1 CDS RB6818 NC_005027.1 3621016 3621930 R PMID: 9665876 best DB hits: BLAST: pir:D71379; probable sensory transduction histidine kinase -; E=5e-23 embl:CAB64771.1; (AJ007794) kin1 [Bacillus cereus] -----; E=1e-21 pir:B69863; two-component sensor histidine kinase homolog ykrQ -; E=2e-21 COG: BS_ykrQ_3; COG0642 Sensory transduction histidine kinases; E=2e-22 PFAM: PF00512; His Kinase A (phosphoacceptor) doma; E=6.1e-12 PF02518; Histidine kinase-, DNA gyrase B-, p; E=8.6e-32; sensory transduction histidine kinase complement(3621016..3621930) Rhodopirellula baltica SH 1 1795087 NP_867479.1 CDS aspC NC_005027.1 3622148 3623422 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 3622148..3623422 Rhodopirellula baltica SH 1 1791006 NP_867480.1 CDS aroC NC_005027.1 3623410 3624624 D catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 3623410..3624624 Rhodopirellula baltica SH 1 1790738 NP_867481.1 CDS RB6823 NC_005027.1 3624680 3626386 R PMID: 8188604 PMID: 8858155 best DB hits: BLAST: pir:I40872; transcription initiation factor sigma 70 - Chlamydophila; E=2e-74 swissprot:P18333; RPSD_CHLTR RNA POLYMERASE SIGMA FACTOR RPOD; E=3e-74 swissprot:Q9Z7F0; RPSD_CHLPN RNA POLYMERASE SIGMA FACTOR RPOD; E=7e-74 COG: CT615; COG0568 DNA-directed RNA polymerase sigma subunits; E=3e-75 PFAM: PF00140; Sigma-70 factor; E=2.8e-111; transcription initiation factor sigma 70 complement(3624680..3626386) Rhodopirellula baltica SH 1 1797092 NP_867482.1 CDS RB6824 NC_005027.1 3626516 3626659 R hypothetical protein complement(3626516..3626659) Rhodopirellula baltica SH 1 1795808 NP_867483.1 CDS glnE NC_005027.1 3626621 3630106 D PMID: 10984043 best DB hits: BLAST: pir:B83021; glutamate-ammonia-ligase adenylyltransferase PA5014; E=1e-45 swissprot:P44419; GLNE_HAEIN GLUTAMATE-AMMONIA-LIGASE; E=7e-44 swissprot:P30870; GLNE_ECOLI GLUTAMATE-AMMONIA-LIGASE; E=7e-43 COG: PA5014; COG1391 Glutamine synthetase adenylyltransferase; E=1e-46; glutamate-ammonia-ligase adenylyltransferase 3626621..3630106 Rhodopirellula baltica SH 1 1794660 NP_867484.1 CDS RB6827 NC_005027.1 3630103 3633003 R PMID: 9384377 best DB hits: BLAST: pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=3e-35 ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=1e-32 embl:CAA10713.1; (AJ132604) hypothetical protein [Lactococcus; E=3e-32 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=2e-36 PFAM: PF00069; Protein kinase domain; E=1.6e-49 PF00480; ROK family; E=0.13; serine/threonine protein kinase complement(3630103..3633003) Rhodopirellula baltica SH 1 1795822 NP_867485.1 CDS hemC NC_005027.1 3633140 3634153 D PMID: 1522882 best DB hits: BLAST: gb:AAK03896.1; (AE006218) Pbg [Pasteurella multocida]; E=4e-49 swissprot:Q60169; HEM3_PSEAE PORPHOBILINOGEN DEAMINASE (PBG); E=3e-46 pdb:1YPN; Reduced Form Hydroxymethylbilane Synthase (K59q; E=2e-44 COG: PA5260; COG0181 Porphobilinogen deaminase; E=3e-47 PFAM: PF00126; Bacterial regulatory helix-tur; E=0.24 PF01379; Porphobilinogen deaminase; E=1.4e-105; porphobilinogen deaminase 3633140..3634153 Rhodopirellula baltica SH 1 1794978 NP_867486.1 CDS hemL NC_005027.1 3634211 3635530 D PMID: 7763385 PMID: 1672867 best DB hits: BLAST: pir:E81978; probable glutamate-1-semialdehyde 2,1-aminomutase (EC; E=1e-116 swissprot:Q40147; GSA_LYCES GLUTAMATE-1-SEMIALDEHYDE; E=1e-115 swissprot:Q06741; GSA_XANCH GLUTAMATE-1-SEMIALDEHYDE; E=1e-115 COG: BS_hemL; COG0001 Glutamate-1-semialdehyde aminotransferase; E=1e-116 PFAM: PF00202; Aminotransferase class-III; E=1.8e-125; glutamate-1-semialdehyde 2,1-aminomutase 3634211..3635530 Rhodopirellula baltica SH 1 1790380 NP_867487.1 CDS RB6833 NC_005027.1 3635550 3636206 D hypothetical protein 3635550..3636206 Rhodopirellula baltica SH 1 1796270 NP_867488.1 CDS RB6838 NC_005027.1 3636563 3636730 D hypothetical protein 3636563..3636730 Rhodopirellula baltica SH 1 1796717 NP_867489.1 CDS RB6839 NC_005027.1 3636888 3637106 R hypothetical protein complement(3636888..3637106) Rhodopirellula baltica SH 1 1790976 NP_867490.1 CDS glmU NC_005027.1 3637141 3637938 D PMID: 2555671 best DB hits: BLAST: pir:S66080; UDP-N-acetylglucosamine pyrophosphorylase gcaD -; E=1e-44 gb:AAK05981.1; AE006418_1 (AE006418) UDP-N-acetylglucosamine; E=1e-43 ddbj:BAB03784.1; (AP001507) UDP-N-acetylglucosamine; E=2e-43 COG: BS_gcaD; COG1207 N-acetylglucosamine-1-phosphate uridyltransferase; E=1e-45 MTH1589; COG1208 Nucleoside-diphosphate-sugar pyrophosphorylases; E=1e-10 PFAM: PF01128; Uncharacterized protein famil; E=2.4e-06 PF00483; Nucleotidyl transferase; E=1.7e-08; UDP-N-acetylglucosamine pyrophosphorylase 3637141..3637938 Rhodopirellula baltica SH 1 1797011 NP_867491.1 CDS prsA NC_005027.1 3637931 3638881 D PMID: 8918235 best DB hits: BLAST: pir:S71262; ribose-phosphate pyrophosphokinase (EC 2.7.6.1) II -; E=2e-82 swissprot:Q42583; KPR2_ARATH RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 2; E=2e-82 embl:CAB43599.1; (AJ006940) phosphoribosyl pyrophosphate synthase; E=3e-82 COG: Cj0918c; COG0462 Phosphoribosylpyrophosphate synthetase; E=6e-78 PFAM: PF00156; Phosphoribosyl transferase domai; E=2.1e-25; ribose-phosphate pyrophosphokinase 3637931..3638881 Rhodopirellula baltica SH 1 1791957 NP_867492.1 CDS RB6845 NC_005027.1 3638904 3640397 R PMID: 10464185 best DB hits: BLAST: gb:AAC33460.2; (AF067140) exopolysaccharide polymerization; E=1e-06 ddbj:BAB07387.1; (AP001519) capsular polysaccharide biosynthesis; E=1e-06 embl:CAC06097.1; (AJ010494) ParA protein [Listeria monocytogenes]; E=3e-06 COG: BH3668; COG0489 ATPases involved in chromosome partitioning; E=1e-07 BH3027; COG2894 Septum formation inhibitor-activating ATPase; E=2e-06 BS_ywqD; COG0489 ATPases involved in chromosome partitioning; E=2e-06 PFAM: PF00991; ParA family ATPase; E=0.49; exopolysaccharide polymerization protein complement(3638904..3640397) Rhodopirellula baltica SH 1 1792348 NP_867493.1 CDS RB6847 NC_005027.1 3640411 3642033 R PMID: 11842247; hypothetical protein complement(3640411..3642033) Rhodopirellula baltica SH 1 1790415 NP_867494.1 CDS RB6848 NC_005027.1 3642216 3642443 D hypothetical protein 3642216..3642443 Rhodopirellula baltica SH 1 1791839 NP_867495.1 CDS RB6849 NC_005027.1 3642232 3642537 R hypothetical protein complement(3642232..3642537) Rhodopirellula baltica SH 1 1794766 NP_867496.1 CDS RB6850 NC_005027.1 3642555 3643991 R best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038 PF01856; Outer membrane protein; E=0.79; hypothetical protein complement(3642555..3643991) Rhodopirellula baltica SH 1 1793095 NP_867497.1 CDS RB6851 NC_005027.1 3644007 3644126 R hypothetical protein complement(3644007..3644126) Rhodopirellula baltica SH 1 1794397 NP_867498.1 CDS RB6852 NC_005027.1 3644168 3645400 R best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide complement(3644168..3645400) Rhodopirellula baltica SH 1 1789979 NP_867499.1 CDS RB6856 NC_005027.1 3645425 3645613 R hypothetical protein complement(3645425..3645613) Rhodopirellula baltica SH 1 1793632 NP_867500.1 CDS RB6858 NC_005027.1 3645782 3646807 R PMID: 8759848 best DB hits: BLAST: swissprot:Q54728; YJHC_STRPN HYPOTHETICAL PROTEIN IN NANB 3'REGION; E=1e-04 pir:A83617; probable oxidoreductase PA0237 [imported] - Pseudomonas; E=0.033 pir:S56505; hypothetical 41.9K protein (leuX-fecE intergenic region); E=0.094 COG: PA0237; COG0673 Predicted dehydrogenases and related proteins; E=0.003 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=2.6e-05; oxidoreductase complement(3645782..3646807) Rhodopirellula baltica SH 1 1794571 NP_867501.1 CDS RB6860 NC_005027.1 3646874 3648253 R PMID: 10192928 best DB hits: BLAST: embl:CAC24034.1; (AL512980) ORF-c34_017 [Sulfolobus solfataricus]; E=2e-10 ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=2e-10 gb:AAD51832.1; AF175299_7 (AF175299) ThuB [Sinorhizobium meliloti]; E=4e-10 COG: BH1248; COG0673 Predicted dehydrogenases and related proteins; E=2e-11 PFAM: PF01408; Oxidoreductase, NAD-bin; E=1.4e-20; NADH-dependent dehydrogenase complement(3646874..3648253) Rhodopirellula baltica SH 1 1790320 NP_867502.1 CDS RB6863 NC_005027.1 3648286 3648444 R hypothetical protein complement(3648286..3648444) Rhodopirellula baltica SH 1 1791722 NP_867503.1 CDS RB6864 NC_005027.1 3648295 3648429 D hypothetical protein 3648295..3648429 Rhodopirellula baltica SH 1 1791112 NP_867504.1 CDS RB6865 NC_005027.1 3648392 3649453 D hypothetical protein 3648392..3649453 Rhodopirellula baltica SH 1 1793910 NP_867505.1 CDS RB6866 NC_005027.1 3649470 3651020 R hypothetical protein complement(3649470..3651020) Rhodopirellula baltica SH 1 1796104 NP_867506.1 CDS RB6867 NC_005027.1 3650927 3652456 R hypothetical protein complement(3650927..3652456) Rhodopirellula baltica SH 1 1796114 NP_867507.1 CDS RB6870 NC_005027.1 3652446 3652676 D hypothetical protein 3652446..3652676 Rhodopirellula baltica SH 1 1796912 NP_867508.1 CDS RB6873 NC_005027.1 3652782 3654230 R PMID: 7910580 best DB hits: BLAST: embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=8e-29 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=8e-29 swissprot:P50428; ARSA_MOUSE ARYLSULFATASE A PRECURSOR (ASA); E=1e-27 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=2e-27 BS_yfnI; COG1368 Phosphoglycerol transferase and related proteins,; E=0.004 PFAM: PF00884; Sulfatase; E=2e-60; arylsulphatase A complement(3652782..3654230) Rhodopirellula baltica SH 1 1793791 NP_867509.1 CDS RB6876 NC_005027.1 3654471 3655649 D PMID: 8098033 best DB hits: BLAST: swissprot:P29679; TESA_ECOLI ACYL-COA THIOESTERASE I PRECURSOR; E=0.32 gb:AAB40248.1; (U82664) acyl-coA thioesterase I precursor; E=0.32 gb:AAG54851.1; AE005230_11 (AE005230) acyl-CoA thioesterase I; E=0.32 PFAM: PF01236; Sodium:galactoside symporter; E=0.17; acyl-CoA thioesterase 3654471..3655649 Rhodopirellula baltica SH 1 1792615 NP_867510.1 CDS RB6880 NC_005027.1 3655896 3656162 R hypothetical protein complement(3655896..3656162) Rhodopirellula baltica SH 1 1793335 NP_867511.1 CDS lolC NC_005027.1 3656194 3657792 D PMID: 10783239 best DB hits: BLAST: pir:E71676; hypothetical protein RP699 - Rickettsia prowazekii; E=2e-19 pir:C83271; conserved hypothetical protein PA2986 [imported] -; E=1e-17 pir:E83271; conserved hypothetical protein PA2988 [imported] -; E=4e-16 COG: RP699; COG0577 Predicted permease; E=2e-20 PFAM: PF02687; Predicted permease; E=3.5e-39; lipoprotein releasing system transmembrane protein LolC 3656194..3657792 Rhodopirellula baltica SH 1 1790951 NP_867512.1 CDS lolD NC_005027.1 3657855 3658622 D PMID: 10783239 best DB hits: BLAST: gb:AAG34709.1; AF320001_2 (AF320001) ATP binding protein; E=5e-49 swissprot:P45247; LOLD_HAEIN LIPOPROTEIN RELEASING SYSTEM; E=3e-45 gb:AAG18646.1; (AE004970) amino acid ABC transporter, ATP-binding; E=3e-45 COG: HI1549; COG1136 ABC-type (unclassified) transport system, ATPase; E=3e-46 PFAM: PF00005; ABC transporter; E=3.4e-58; lipoprotein releasing system ATP-binding protein LolD 3657855..3658622 Rhodopirellula baltica SH 1 1796214 NP_867513.1 CDS RB6884 NC_005027.1 3658683 3658841 D hypothetical protein 3658683..3658841 Rhodopirellula baltica SH 1 1794711 NP_867514.1 CDS RB6885 NC_005027.1 3658845 3661157 R PMID: 8063110 best DB hits: BLAST: swissprot:Q57142; C554_NITEU CYTOCHROME C-554 PRECURSOR (C554); E=1e-05 pdb:1FT5; A Chain A, Crystal Structure Of The Oxidized State Of; E=1e-05; cytochrome c-554 complement(3658845..3661157) Rhodopirellula baltica SH 1 1790822 NP_867515.1 CDS RB6888 NC_005027.1 3661187 3662449 R hypothetical protein complement(3661187..3662449) Rhodopirellula baltica SH 1 1790165 NP_867516.1 CDS RB6891 NC_005027.1 3662541 3665156 R PMID: 10681551 best DB hits: BLAST: embl:CAB76379.1; (Y13219) hemocyanin type 1 [Haliotis; E=0.20 embl:CAC20588.1; (AJ252741) hemocyanin [Haliotis tuberculata]; E=0.20; hemocyanin type 1 complement(3662541..3665156) Rhodopirellula baltica SH 1 1790271 NP_867517.1 CDS rfe NC_005027.1 3665153 3666358 R PMID: 1379743 best DB hits: BLAST: pir:S74927; lipophilic protein lim - Synechocystis sp. (strain PCC; E=3e-20 pir:B69721; teichoic acid linkage unit synthesis tagO - Bacillus; E=8e-19 pir:A55856; llm protein - Staphylococcus aureus ----- ddbj:; E=3e-18 COG: sll0648; COG0472 UDP-N-acetylmuramyl pentapeptide; E=2e-21 PFAM: PF00953; Glycosyl transferase; E=1.3e-27; undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase complement(3665153..3666358) Rhodopirellula baltica SH 1 1792877 NP_867518.1 CDS RB6898 NC_005027.1 3666374 3666835 R hypothetical protein complement(3666374..3666835) Rhodopirellula baltica SH 1 1795248 NP_867519.1 CDS RB6901 NC_005027.1 3666617 3669100 D hypothetical protein 3666617..3669100 Rhodopirellula baltica SH 1 1794005 NP_867520.1 CDS RB6903 NC_005027.1 3669059 3669220 R hypothetical protein complement(3669059..3669220) Rhodopirellula baltica SH 1 1793888 NP_867521.1 CDS RB6904 NC_005027.1 3669200 3670501 D hypothetical protein 3669200..3670501 Rhodopirellula baltica SH 1 1791856 NP_867522.1 CDS RB6905 NC_005027.1 3670529 3670783 R hypothetical protein complement(3670529..3670783) Rhodopirellula baltica SH 1 1790512 NP_867523.1 CDS RB6906 NC_005027.1 3670719 3670961 R hypothetical protein complement(3670719..3670961) Rhodopirellula baltica SH 1 1790649 NP_867524.1 CDS RB6907 NC_005027.1 3670884 3671042 D hypothetical protein 3670884..3671042 Rhodopirellula baltica SH 1 1793714 NP_867525.1 CDS RB6908 NC_005027.1 3671057 3671329 R hypothetical protein complement(3671057..3671329) Rhodopirellula baltica SH 1 1797048 NP_867526.1 CDS RB6909 NC_005027.1 3671248 3671514 D hypothetical protein 3671248..3671514 Rhodopirellula baltica SH 1 1794913 NP_867527.1 CDS RB6910 NC_005027.1 3671356 3671484 R hypothetical protein complement(3671356..3671484) Rhodopirellula baltica SH 1 1791097 NP_867528.1 CDS RB6911 NC_005027.1 3671445 3672737 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 3671445..3672737 Rhodopirellula baltica SH 1 1790069 NP_867529.1 CDS RB6912 NC_005027.1 3672793 3672960 D signal peptide 3672793..3672960 Rhodopirellula baltica SH 1 1796129 NP_867530.1 CDS RB6914 NC_005027.1 3673034 3676120 D best DB hits: BLAST: embl:CAB98267.1; (AJ276171) ASPIC [Homo sapiens]; E=1e-07 embl:CAB98268.1; (AJ276171) ASPIC [Homo sapiens] ----- embl:; E=1e-07 embl:CAB98269.1; (AJ276171) ASPIC [Homo sapiens]; E=1e-07 COG: aq_854; COG0457 TPR-repeat-containing proteins; E=0.004 PFAM: PF01839; FG-GAP repeat; E=0.037; acid secreted protein ASPIC 3673034..3676120 Rhodopirellula baltica SH 1 1790713 NP_867531.1 CDS RB6916 NC_005027.1 3676188 3676391 D hypothetical protein 3676188..3676391 Rhodopirellula baltica SH 1 1795062 NP_867532.1 CDS RB6917 NC_005027.1 3676346 3676531 R hypothetical protein complement(3676346..3676531) Rhodopirellula baltica SH 1 1796286 NP_867533.1 CDS RB6918 NC_005027.1 3676537 3676791 D hypothetical protein 3676537..3676791 Rhodopirellula baltica SH 1 1796315 NP_867534.1 CDS RB6920 NC_005027.1 3676847 3677914 D PMID: 8594326 best DB hits: BLAST: pir:S57418; fimbrial protein MS11-N556 precursor - Neisseria; E=0.009 ddbj:BAB06546.1; (AP001516) exogenous DNA-binding protein; E=0.014 gb:AAD05177.1; (AF110185) general secretory pathway protein G; E=0.014 COG: DR0548; COG2165 General secretory pathway proteins G and H and; E=0.010 PFAM: PF00114; Pilin (bacterial filament); E=0.16; fimbrial protein 3676847..3677914 Rhodopirellula baltica SH 1 1793633 NP_867535.1 CDS RB6923 NC_005027.1 3677883 3678398 D best DB hits: PFAM: PF02369; Bacterial Ig-like domain (group 1); E=0.83; hypothetical protein 3677883..3678398 Rhodopirellula baltica SH 1 1791602 NP_867536.1 CDS RB6925 NC_005027.1 3677976 3678461 R hypothetical protein complement(3677976..3678461) Rhodopirellula baltica SH 1 1791084 NP_867537.1 CDS RB6928 NC_005027.1 3678479 3678961 D hypothetical protein 3678479..3678961 Rhodopirellula baltica SH 1 1795438 NP_867538.1 CDS gdhA NC_005027.1 3679076 3680317 R PMID: 7551585 best DB hits: BLAST: swissprot:O04937; DHEA_NICPL GLUTAMATE DEHYDROGENASE A (GDH A); E=1e-115 swissprot:Q43314; DHE1_ARATH GLUTAMATE DEHYDROGENASE 1 (GDH 1); E=1e-115 pir:T04342; glutamate dehydrogenase (EC 1.4.1.2) - maize -----; E=1e-114 COG: TM1015; COG0334 Glutamate dehydrogenase/leucine dehydrogenase; E=1e-99 PFAM: PF02812; Glu/Leu/Phe/Val dehydrogenase; E=3.1e-56 PF00044; Glyceraldehyde 3-phosphate de; E=0.76 PF02254; KTN NAD-binding domain; E=0.33; glutamate dehydrogenase A complement(3679076..3680317) Rhodopirellula baltica SH 1 1792980 NP_867539.1 CDS cysK NC_005027.1 3680349 3681308 R PMID: 10930739 best DB hits: BLAST: gb:AAG01804.1; AF276772_3 (AF276772) O-acetylserine sulfhydrylase; E=3e-83 swissprot:P95230; CYSK_MYCTU CYSTEINE SYNTHASE A (O-ACETYLSERINE; E=1e-82 pir:H81161; probable cysteine synthase (EC 4.2.99.8) NMA0974; E=1e-81 COG: Rv2334; COG0031 Cysteine synthase; E=1e-83 PFAM: PF00291; Pyridoxal-phosphate dependent enzym; E=1.3e-119; cysteine synthase (O-acetylserine sulfhydrylase) complement(3680349..3681308) Rhodopirellula baltica SH 1 1790390 NP_867540.1 CDS korB NC_005027.1 3681290 3682351 R catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta complement(3681290..3682351) Rhodopirellula baltica SH 1 1792837 NP_867541.1 CDS korA NC_005027.1 3682377 3684260 R PMID: 11401501 best DB hits: BLAST: embl:CAC08296.1; (AL392148) oxidoreductase [Streptomyces; E=1e-165 embl:CAB60189.1; (AL132824) oxidoreductase alpha-subunit; E=1e-164 pir:F70864; probable oxidoreductase alpha subunit - Mycobacterium; E=1e-160 COG: Rv2455c_2; COG0674 Pyruvate:ferredoxin oxidoreductase and related; E=1e-106 Rv2455c_1; COG1014 Pyruvate:ferredoxin oxidoreductase and related; E=2e-46 BH2374_2; COG0674 Pyruvate:ferredoxin oxidoreductase and related; E=2e-40 PFAM: PF01855; Pyruvate flavodoxin/ferredoxin oxido; E=8.6e-64; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha complement(3682377..3684260) Rhodopirellula baltica SH 1 1795158 NP_867542.1 CDS RB6937 NC_005027.1 3684322 3684504 D hypothetical protein 3684322..3684504 Rhodopirellula baltica SH 1 1795161 NP_867543.1 CDS RB6938 NC_005027.1 3684477 3685985 R hypothetical protein complement(3684477..3685985) Rhodopirellula baltica SH 1 1795098 NP_867544.1 CDS RB6941 NC_005027.1 3686076 3686675 R hypothetical protein complement(3686076..3686675) Rhodopirellula baltica SH 1 1793831 NP_867545.1 CDS cyaA NC_005027.1 3686749 3688518 D PMID: 9523018 best DB hits: BLAST: pir:C71320; probable adenylate cyclase - syphilis spirochete -----; E=8e-40 pir:F70563; probable transmembrane protein - Mycobacterium; E=2e-35 embl:CAA18817.1; (AL023093) membrane protein; E=4e-35 COG: TP0485; COG2114 Adenylate cyclase, family 3 (some proteins contain; E=8e-41 slr1991_2; COG2114 Adenylate cyclase, family 3 (some proteins; E=9e-14 PA3217; COG2114 Adenylate cyclase, family 3 (some proteins contain; E=4e-12 PFAM: PF00672; HAMP domain; E=8.7e-11 PF00211; Adenylate and Guanylate cyclase; E=7e-26; adenylate cyclase 3686749..3688518 Rhodopirellula baltica SH 1 1790655 NP_867546.1 CDS RB6949 NC_005027.1 3688572 3689660 D PMID: 11953381; hypothetical protein 3688572..3689660 Rhodopirellula baltica SH 1 1795574 NP_867547.1 CDS dgkA NC_005027.1 3689634 3690014 R PMID: 8071224 best DB hits: BLAST: ddbj:BAB05083.1; (AP001511) diacylglycerol kinase [Bacillus; E=3e-05 gb:AAA70044.1; (U29177) diacylglycerol kinase [Bacillus subtilis]; E=9e-05 swissprot:P19638; KDGL_BACSU DIACYLGLYCEROL KINASE (DAGK); E=2e-04 COG: BH1364; COG0818 Diacylglycerol kinase; E=3e-06 PFAM: PF01219; Prokaryotic diacylglycerol kinase; E=1.1e-19; diacylglycerol kinase complement(3689634..3690014) Rhodopirellula baltica SH 1 1794802 NP_867548.1 CDS RB6951 NC_005027.1 3690015 3693377 R hypothetical protein complement(3690015..3693377) Rhodopirellula baltica SH 1 1795666 NP_867549.1 CDS RB6956 NC_005027.1 3693603 3695060 D PMID: 7910580 best DB hits: BLAST: embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=1e-46 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=1e-46 pdb:1E2S; P Chain P, Crystal Structure Of An Arylsulfatase A; E=1e-45 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=4e-32 BS_yvgJ; COG1368 Phosphoglycerol transferase and related proteins,; E=0.006 PFAM: PF00884; Sulfatase; E=1.5e-63; arylsulphatase A 3693603..3695060 Rhodopirellula baltica SH 1 1792182 NP_867550.1 CDS RB6958 NC_005027.1 3695186 3695752 R PMID: 11016950 best DB hits: BLAST: gb:AAG19686.1; (AE005056) Vng1353c [Halobacterium sp. NRC-1]; E=0.009 gb:AAG19687.1; (AE005056) Vng1355h [Halobacterium sp. NRC-1]; E=0.034 ddbj:BAB05440.1; (AP001512) BH1721~unknown conserved protein; E=0.049 COG: VNG1355H; COG3402 Uncharacterized protein; E=0.003; hypothetical protein complement(3695186..3695752) Rhodopirellula baltica SH 1 1790598 NP_867551.1 CDS ruvB NC_005027.1 3695880 3696980 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(3695880..3696980) Rhodopirellula baltica SH 1 1793313 NP_867552.1 CDS RB6961 NC_005027.1 3696994 3697689 D PMID: 7889934 best DB hits: BLAST: swissprot:O05843; RPOE_MYCTU RNA POLYMERASE SIGMA-E FACTOR; E=6e-07 gb:AAD41810.1; AF144091_4 (AF144091) sigma factor SigH; E=5e-06 pir:T42015; probable RNA polymerase sigma factor - Streptomyces; E=1e-05 COG: Rv3223c; COG1595 DNA-directed RNA polymerase specialized sigma; E=5e-08 PFAM: PF00140; Sigma-70 factor; E=0.012; RNA polymerase sigma-E factor 3696994..3697689 Rhodopirellula baltica SH 1 1792027 NP_867553.1 CDS RB6962 NC_005027.1 3697682 3698575 D best DB hits: BLAST: pir:T36872; hypothetical protein SCI51.09c - Streptomyces coelicolor; E=4e-08 swissprot:P35155; YPUH_BACSU HYPOTHETICAL 22.0 KD PROTEIN IN; E=3e-07 pir:D71320; conserved hypothetical protein TP0458 - syphilis; E=5e-06 COG: BS_ypuH; COG1386 Predicted transcriptional regulator containing the; E=2e-08; transcriptional regulator 3697682..3698575 Rhodopirellula baltica SH 1 1794604 NP_867554.1 CDS RB6963 NC_005027.1 3698510 3699649 R PMID: 10360571 best DB hits: BLAST: pir:G72218; conserved hypothetical protein - Thermotoga maritima; E=5e-45 pir:T02275; hypothetical protein T13D8.12 - Arabidopsis thaliana; E=3e-44 pir:H70337; conserved hypothetical protein aq_416 - Aquifex aeolicus; E=3e-43 COG: TM1715; COG0820 Predicted Fe-S oxidoreductase; E=4e-46; Fe-S oxidoreductase complement(3698510..3699649) Rhodopirellula baltica SH 1 1796015 NP_867555.1 CDS RB6964 NC_005027.1 3699799 3703368 D PMID: 7574579 best DB hits: BLAST: swissprot:Q44091; SNDH_ACELI L-SORBOSONE DEHYDROGENASE (SNDH); E=0.001 PFAM: PF00034; Cytochrome c; E=0.11; L-sorbosone dehydrogenase 3699799..3703368 Rhodopirellula baltica SH 1 1796183 NP_867556.1 CDS RB6967 NC_005027.1 3703322 3705316 D PMID: 10984043 best DB hits: BLAST: pir:F83313; conserved hypothetical protein PA2651 [imported] -; E=7e-13 pir:C82300; conserved hypothetical protein VC0624 [imported] -; E=1e-12 swissprot:O83564; Y553_TREPA HYPOTHETICAL PROTEIN TP0553 -----; E=1e-09 COG: PA2651; COG0628 Predicted permease; E=7e-14 PFAM: PF01594; Domain of unknown function DU; E=1.1e-06 PF00694; Aconitase C-terminal domain; E=0.81 PF01594; Domain of unknown function DU; E=2.4e-27; permease 3703322..3705316 Rhodopirellula baltica SH 1 1792588 NP_867557.1 CDS RB6968 NC_005027.1 3705375 3707036 D PMID: 8813677 best DB hits: BLAST: pir:T30841; serine-repeat antigen 4 - Plasmodium vivax ----- gb:; E=0.030 swissprot:Q06852; SLP1_CLOTM CELL SURFACE GLYCOPROTEIN 1 PRECURSOR; E=0.37; serine repeat-containing antigen 3705375..3707036 Rhodopirellula baltica SH 1 1792108 NP_867558.1 CDS RB6969 NC_005027.1 3707053 3708402 R PMID: 12024217 best DB hits: PFAM: PF01319; Cholesterol oxidase; E=0.56 PF00884; Sulfatase; E=0.052; hypothetical protein complement(3707053..3708402) Rhodopirellula baltica SH 1 1792834 NP_867559.1 CDS RB6971 NC_005027.1 3708439 3710583 R hypothetical protein complement(3708439..3710583) Rhodopirellula baltica SH 1 1790250 NP_867560.1 CDS tehB NC_005027.1 3710584 3711420 D PMID: 10339832 PMID: 2060788 best DB hits: BLAST: ddbj:BAB05779.1; (AP001514) BH2060~unknown [Bacillus halodurans]; E=5e-05 gb:AAD31610.1; (AF079807) tellurite resistance protein TehB; E=1e-04 swissprot:P45134; TEHB_HAEIN TELLURITE RESISTANCE PROTEIN TEHB; E=2e-04 COG: HI1275; COG0500 SAM-dependent methyltransferases; E=2e-05 VNG1117C; COG2520 Predicted methyltransferase; E=0.001 NMB1617; COG0500 SAM-dependent methyltransferases; E=0.002; tellurite resistance protein TehB 3710584..3711420 Rhodopirellula baltica SH 1 1795146 NP_867561.1 CDS RB6977 NC_005027.1 3711550 3713001 D PMID: 9603950 best DB hits: BLAST: gb:AAB31210.2; (S73498) AgX-1 antigen [Homo sapiens]; E=9e-64 swissprot:Q16222; UAP1_HUMAN UDP-N-ACETYLHEXOSAMINE; E=9e-64 gb:AAF52387.1; (AE003613) BcDNA:LD24639 gene product [Drosophila; E=1e-63 PFAM: PF01128; Uncharacterized protein family UPF00; E=0.091 PF01704; UTP--glucose-1-phosphate uridylyltra; E=3.5e-37; UDP-N-acetylhexosamine pyrophosphorylase 3711550..3713001 Rhodopirellula baltica SH 1 1792184 NP_867562.1 CDS RB6978 NC_005027.1 3712827 3715022 D PMID: 10984043 best DB hits: BLAST: pir:A83071; hypothetical protein PA4591 [imported] - Pseudomonas; E=2e-04 pir:S77541; hypothetical protein slr1207 - Synechocystis sp. (strain; E=4e-04 pir:D70391; hypothetical protein aq_1060 - Aquifex aeolicus -----; E=0.003 COG: PA4591; COG0845 Membrane-fusion protein; E=2e-05 aq_1060; COG1566 Multidrug resistance efflux pump; E=3e-04 PA3402; COG0845 Membrane-fusion protein; E=8e-04 PFAM: PF00358; phosphoenolpyruvate-dependent sug; E=0.72; hypothetical protein 3712827..3715022 Rhodopirellula baltica SH 1 1795415 NP_867563.1 CDS RB6982 NC_005027.1 3715019 3715879 D PMID: 10952301 best DB hits: BLAST: swissprot:Q9WYI7; Y352_THEMA HYPOTHETICAL ABC TRANSPORTER; E=4e-61 pir:A82184; ABC transporter ATP-binding protein VC1568 [imported] -; E=4e-59 ddbj:BAB07392.1; (AP001519) ABC transporter (ATP-binding protein); E=2e-57 COG: TM0352; COG1136 ABC-type (unclassified) transport system, ATPase; E=4e-62 PFAM: PF00485; Phosphoribulokinase / Uridine; E=0.53 PF00005; ABC transporter; E=3.1e-55; ABC transporter ATP-binding protein 3715019..3715879 Rhodopirellula baltica SH 1 1792061 NP_867564.1 CDS RB6983 NC_005027.1 3715876 3717207 D PMID: 10984043 best DB hits: BLAST: pir:S76946; hypothetical protein - Synechocystis sp. (strain PCC; E=2e-34 swissprot:O31712; YKNZ_BACSU HYPOTHETICAL 42.1 KDA PROTEIN IN; E=9e-33 pir:G72385; conserved hypothetical protein - Thermotoga maritima; E=4e-30 COG: slr0594; COG0577 Predicted permease; E=2e-35 PFAM: PF02780; Transketolase, C-terminal dom; E=0.67 PF02687; Predicted permease; E=1.8e-34; ATP-binding/permease fusion ABC transporter 3715876..3717207 Rhodopirellula baltica SH 1 1792084 NP_867565.1 CDS RB6984 NC_005027.1 3717257 3717394 D hypothetical protein 3717257..3717394 Rhodopirellula baltica SH 1 1797052 NP_867566.1 CDS RB6985 NC_005027.1 3717360 3718910 D PMID: 10192928 best DB hits: BLAST: ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=1e-07 embl:CAC24034.1; (AL512980) ORF-c34_017 [Sulfolobus solfataricus]; E=2e-07 swissprot:P40332; YISS_BACSU HYPOTHETICAL 37.5 KD PROTEIN IN; E=5e-07 COG: BH1248; COG0673 Predicted dehydrogenases and related proteins; E=1e-08 PFAM: PF01113; Dihydrodipicolinate reductase; E=0.39 PF01408; Oxidoreductase, NAD-bindi; E=1.3e-23; NADH-dependent dehydrogenase 3717360..3718910 Rhodopirellula baltica SH 1 1790293 NP_867567.1 CDS RB6989 NC_005027.1 3718958 3719206 R hypothetical protein complement(3718958..3719206) Rhodopirellula baltica SH 1 1790820 NP_867568.1 CDS RB6990 NC_005027.1 3719166 3719456 R hypothetical protein complement(3719166..3719456) Rhodopirellula baltica SH 1 1793317 NP_867569.1 CDS RB6991 NC_005027.1 3719393 3720892 R best DB hits: PFAM: PF00429; ENV polyprotein (coat polypro; E=0.67; hypothetical protein complement(3719393..3720892) Rhodopirellula baltica SH 1 1794085 NP_867570.1 CDS cysH NC_005027.1 3720852 3721769 D PMID: 9006060 PMID: 2005873 best DB hits: BLAST: swissprot:P94498; CYH1_BACSU PHOSPHOADENOSINE PHOSPHOSULFATE; E=2e-48 swissprot:O06737; CYH2_BACSU PROBABLE PHOSPHOADENOSINE; E=4e-48 ddbj:BAB05205.1; (AP001512) 3'-phosphoadenosine 5'-phosphosulfate; E=3e-47 COG: BS_cysH; COG0175 3'-phosphoadenosine 5'-phosphosulfate; E=2e-49 cysH; COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase; E=1e-17 BU426; COG0175 3'-phosphoadenosine 5'-phosphosulfate; E=2e-13 PFAM: PF01507; Phosphoadenosine phosphosulfate r; E=4.8e-62; phosphoadenosine phosphosulfate reductase 3720852..3721769 Rhodopirellula baltica SH 1 1796917 NP_867571.1 CDS RB6994 NC_005027.1 3721806 3722231 D PMID: 8905231 best DB hits: BLAST: pir:S75800; hypothetical protein slr0846 - Synechocystis sp.; E=7e-10 swissprot:Q55433; Y846_SYNY3 HYPOTHETICAL 16.4 KD PROTEIN; E=7e-10 swissprot:Q10613; YC87_MYCTU HYPOTHETICAL PROTEIN RV1287 PRECURSOR; E=4e-07 COG: slr0846; COG1959 Predicted transcriptional regulator; E=7e-11 PFAM: PF02082; Uncharacterized protein family UPF00; E=9e-19; hypothetical protein 3721806..3722231 Rhodopirellula baltica SH 1 1793474 NP_867572.1 CDS RB6995 NC_005027.1 3722268 3722555 D hypothetical protein 3722268..3722555 Rhodopirellula baltica SH 1 1791843 NP_867573.1 CDS fliC NC_005027.1 3722505 3724562 R PMID: 2498283 PMID: 814121 best DB hits: BLAST: pir:D72335; flagellin - Thermotoga maritima (strain MSB8) -----; E=2e-18 gb:AAC01555.1; (AF007122) flagellin [Vibrio cholerae]; E=1e-17 pir:C82112; flagellin FlaE VC2144 [imported] - Vibrio cholerae; E=1e-17 COG: TM0758; COG1344 Flagellin and related hook-associated proteins; E=2e-19 PFAM: PF00669; Bacterial flagellin N-terminus; E=1.1e-25 PF00700; Bacterial flagellin C-terminus; E=7.2e-18; flagellin complement(3722505..3724562) Rhodopirellula baltica SH 1 1791191 NP_867574.1 CDS RB6999 NC_005027.1 3724601 3724768 R hypothetical protein complement(3724601..3724768) Rhodopirellula baltica SH 1 1796595 NP_867575.1 CDS uvrC NC_005027.1 3724763 3725806 D PMID: 10567266 best DB hits: BLAST: pir:C75407; excinuclease ABC chain C - Deinococcus radiodurans; E=5e-04 ddbj:BAA85760.1; (AB033748) UVR-C protein [Deinococcus; E=0.003 swissprot:P73580; UVRC_SYNY3 EXCINUCLEASE ABC SUBUNIT C -----; E=0.008 COG: DR1354; COG0322 Nuclease subunit of the excinuclease complex; E=4e-05 PFAM: PF01541; Endo/excinuclease amino termin; E=2.9e-05; excinuclease ABC subunit C 3724763..3725806 Rhodopirellula baltica SH 1 1795012 NP_867576.1 CDS RB7002 NC_005027.1 3725925 3726623 D hypothetical protein 3725925..3726623 Rhodopirellula baltica SH 1 1791678 NP_867577.1 CDS RB7004 NC_005027.1 3726656 3727471 R PMID: 10984043 best DB hits: BLAST: pir:E70082; glucose 1-dehydrogenase homolog yxnA - Bacillus subtilis; E=2e-21 gb:AAG18928.1; (AE004994) oxidoreductase; YusZ3 [Halobacterium; E=1e-19 pir:F83229; probable short chain dehydrogenase PA3330 [imported] -; E=1e-18 COG: BS_yxnA; COG1028 Dehydrogenases with different specificities; E=2e-22 PA3330; COG1028 Dehydrogenases with different specificities (related; E=1e-19 VCA1057; COG0300 Short-chain dehydrogenases of various substrate; E=7e-19 PFAM: PF00106; short chain dehydrogenase; E=1.2e-38; glucose 1-dehydrogenase-like protein complement(3726656..3727471) Rhodopirellula baltica SH 1 1792740 NP_867578.1 CDS hflX NC_005027.1 3727474 3728853 R PMID: 8248183 best DB hits: BLAST: swissprot:P25519; HFLX_ECOLI GTP-BINDING PROTEIN HFLX -----; E=2e-82 gb:AAG59369.1; AE005650_8 (AE005650) GTP - binding subunit of; E=2e-81 pir:D82334; GTP-binding protein HflX VC0348 [imported] - Vibrio; E=5e-78 COG: hflX; COG2262 GTPases; E=2e-83 slr1090; COG0536 Predicted GTPase; E=2e-06 PFAM: PF00005; ABC transporter; E=0.53 PF02421; Ferrous iron transport protein B; E=0.00079 PF01926; GTPase of unknown function; E=0.011; GTP-binding protein HflX complement(3727474..3728853) Rhodopirellula baltica SH 1 1796986 NP_867579.1 CDS uvrC NC_005027.1 3728944 3730368 R PMID: 6330676 best DB hits: BLAST: swissprot:P71689; UVRC_MYCTU EXCINUCLEASE ABC SUBUNIT C -----; E=4e-44 pir:G81845; excinuclease ABC subunit C NMA1540 [imported] -; E=6e-39 ddbj:BAB06816.1; (AP001517) excinuclease ABC (subunit C); E=2e-38 COG: Rv1420; COG0322 Nuclease subunit of the excinuclease complex; E=3e-45 PFAM: PF01541; Endo/excinuclease amino terminal; E=2.1e-18 PF02151; UvrB/uvrC motif; E=8.4e-11; excinuclease ABC subunit C complement(3728944..3730368) Rhodopirellula baltica SH 1 1790549 NP_867580.1 CDS RB7012 NC_005027.1 3730620 3731789 R PMID: 10731132 best DB hits: BLAST: gb:AAF54635.1; (AE003691) CG5270 gene product [Drosophila; E=0.17 PFAM: PF02058; Guanylin precursor; E=0.1; hypothetical protein complement(3730620..3731789) Rhodopirellula baltica SH 1 1793658 NP_867581.1 CDS RB7014 NC_005027.1 3731793 3732359 R hypothetical protein complement(3731793..3732359) Rhodopirellula baltica SH 1 1794089 NP_867582.1 CDS RB7015 NC_005027.1 3732349 3732537 R hypothetical protein complement(3732349..3732537) Rhodopirellula baltica SH 1 1793278 NP_867583.1 CDS RB7016 NC_005027.1 3732513 3733238 D hypothetical protein 3732513..3733238 Rhodopirellula baltica SH 1 1795529 NP_867584.1 CDS RB7019 NC_005027.1 3733282 3733671 R best DB hits: BLAST: pir:H70988; hypothetical protein Rv1767 - Mycobacterium; E=0.065 pir:C69225; conserved hypothetical protein MTH935 -; E=0.14 COG: Rv1767; COG0599 Uncharacterized ACR, homolog of; E=0.006 PFAM: PF02627; Carboxymuconolactone decarboxylase; E=1e-08; hypothetical protein complement(3733282..3733671) Rhodopirellula baltica SH 1 1796112 NP_867585.1 CDS hemD NC_005027.1 3733593 3735125 R PMID: 7665501 best DB hits: BLAST: gb:AAK00606.1; AF221100_3 (AF221100) uroporphyrinogen III; E=1e-89 swissprot:Q59294; HEM4_CLOJO PORPHYRIN BIOSYNTHESIS PROTEIN HEMD; E=1e-64 gb:AAC18588.1; (AF064061) uroporphyrinogen-III; E=3e-63 COG: NMB1156_2; COG0007 Uroporphyrinogen-III methylase; E=2e-44 sll0166_2; COG1587 Uroporphyrinogen-III synthase; E=7e-30 PFAM: PF00590; Tetrapyrrole (Corrin/Porphyrin); E=1.2e-63 PF02602; Uroporphyrinogen-III synthase H; E=7.1e-43; uroporphyrinogen III synthase/methyltransferase complement(3733593..3735125) Rhodopirellula baltica SH 1 1793083 NP_867586.1 CDS rpsT NC_005027.1 3735291 3735563 D PMID: 6267039 PMID: 786731 best DB hits: BLAST: pir:F82559; 30S ribosomal protein S20 XF2421 [imported] - Xylella; E=3e-06 pir:A70452; ribosomal protein S20 - Aquifex aeolicus ----- gb:; E=8e-06 pir:E83074; 30S ribosomal protein S20 PA4563 [imported] -; E=1e-05 COG: XF2421; COG0268 Ribosomal protein S20; E=4e-07 PFAM: PF01649; Ribosomal protein S20; E=5.2e-32; 30S ribosomal protein S20 3735291..3735563 Rhodopirellula baltica SH 1 1793537 NP_867587.1 CDS RB7023 NC_005027.1 3735792 3736535 R PMID: 8590279 best DB hits: BLAST: swissprot:Q55909; Y305_SYNY3 HYPOTHETICAL 22.2 KD PROTEIN SLR0305; E=0.003 embl:CAB61866.1; (AL133252) integral membrane protein; E=0.028 gb:AAF69152.1; AC007915_4 (AC007915) F27F5.5 [Arabidopsis; E=0.85 COG: slr0305; COG0398 Uncharacterized ACR; E=3e-04; hypothetical protein complement(3735792..3736535) Rhodopirellula baltica SH 1 1792224 NP_867588.1 CDS RB7026 NC_005027.1 3736532 3736702 R hypothetical protein complement(3736532..3736702) Rhodopirellula baltica SH 1 1794455 NP_867589.1 CDS RB7027 NC_005027.1 3736673 3736885 D hypothetical protein 3736673..3736885 Rhodopirellula baltica SH 1 1790462 NP_867590.1 CDS RB7028 NC_005027.1 3736857 3738494 D PMID: 10984043 best DB hits: BLAST: pir:B83295; hypothetical protein PA2794 [imported] - Pseudomonas; E=0.056 gb:AAF60322.1; (AF236853) sialidase [Pseudomonas aeruginosa]; E=0.16 PFAM: PF02012; BNR repeat; E=0.15; hypothetical protein 3736857..3738494 Rhodopirellula baltica SH 1 1795341 NP_867591.1 CDS RB7030 NC_005027.1 3738527 3739885 R hypothetical protein complement(3738527..3739885) Rhodopirellula baltica SH 1 1789995 NP_867592.1 CDS RB7033 NC_005027.1 3739882 3742263 R PMID: 8244995 best DB hits: BLAST: pir:A49551; filamin, Muller cell - chicken ----- gb:; E=0.77; filamin complement(3739882..3742263) Rhodopirellula baltica SH 1 1795296 NP_867593.1 CDS RB7036 NC_005027.1 3742454 3742618 D hypothetical protein 3742454..3742618 Rhodopirellula baltica SH 1 1797091 NP_867594.1 CDS RB7037 NC_005027.1 3742675 3742908 R hypothetical protein complement(3742675..3742908) Rhodopirellula baltica SH 1 1791220 NP_867595.1 CDS RB7038 NC_005027.1 3742902 3743555 D hypothetical protein 3742902..3743555 Rhodopirellula baltica SH 1 1790017 NP_867596.1 CDS RB7039 NC_005027.1 3742965 3743573 R hypothetical protein complement(3742965..3743573) Rhodopirellula baltica SH 1 1795928 NP_867597.1 CDS RB7041 NC_005027.1 3743753 3744025 R hypothetical protein complement(3743753..3744025) Rhodopirellula baltica SH 1 1792966 NP_867598.1 CDS RB7042 NC_005027.1 3743971 3744246 D hypothetical protein 3743971..3744246 Rhodopirellula baltica SH 1 1790399 NP_867599.1 CDS RB7045 NC_005027.1 3744340 3744798 D hypothetical protein 3744340..3744798 Rhodopirellula baltica SH 1 1790584 NP_867600.1 CDS RB7048 NC_005027.1 3744905 3745480 D hypothetical protein 3744905..3745480 Rhodopirellula baltica SH 1 1791261 NP_867601.1 CDS RB7049 NC_005027.1 3745423 3745623 D hypothetical protein 3745423..3745623 Rhodopirellula baltica SH 1 1796739 NP_867602.1 CDS RB7050 NC_005027.1 3745617 3745946 D hypothetical protein 3745617..3745946 Rhodopirellula baltica SH 1 1789922 NP_867603.1 CDS RB7052 NC_005027.1 3745943 3746491 D hypothetical protein 3745943..3746491 Rhodopirellula baltica SH 1 1794058 NP_867604.1 CDS RB7056 NC_005027.1 3746488 3746775 D hypothetical protein 3746488..3746775 Rhodopirellula baltica SH 1 1794772 NP_867605.1 CDS RB7057 NC_005027.1 3746784 3747071 D hypothetical protein 3746784..3747071 Rhodopirellula baltica SH 1 1795117 NP_867606.1 CDS RB7058 NC_005027.1 3747156 3749396 D best DB hits: BLAST: gb:AAD42851.1; AF159689_3 (AF159689) serinethreonine kinase PKN3; E=3e-40 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=5e-38 swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=2e-35 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=5e-39 PFAM: PF00069; Protein kinase domain; E=2.1e-34; serine/threonine kinase 3747156..3749396 Rhodopirellula baltica SH 1 1796935 NP_867607.1 CDS RB7061 NC_005027.1 3749482 3751161 R PMID: 10984043 best DB hits: BLAST: pir:A83099; hypothetical protein PA4371 [imported] - Pseudomonas; E=3e-09 pir:A82220; hypothetical protein VC1265 [imported] - Vibrio cholerae; E=4e-08 pir:E81378; cytochrome-c peroxidase (EC 1.11.1.5) Cj0358; E=0.23; hypothetical protein complement(3749482..3751161) Rhodopirellula baltica SH 1 1791176 NP_867608.1 CDS RB7063 NC_005027.1 3751250 3751696 D hypothetical protein 3751250..3751696 Rhodopirellula baltica SH 1 1794836 NP_867609.1 CDS RB7065 NC_005027.1 3751693 3752295 R hypothetical protein complement(3751693..3752295) Rhodopirellula baltica SH 1 1792988 NP_867610.1 CDS RB7067 NC_005027.1 3752187 3753347 R hypothetical protein complement(3752187..3753347) Rhodopirellula baltica SH 1 1795635 NP_867611.1 CDS rpoA NC_005027.1 3753366 3753644 R PMID: 3093467 best DB hits: BLAST: swissprot:P20429; RPOA_BACSU DNA-DIRECTED RNA POLYMERASE ALPHA; E=1e-07 gb:AAA81287.1; (U30821) alpha subunit of RNA polymerase; E=5e-07 swissprot:O50634; RPOA_BACHD DNA-DIRECTED RNA POLYMERASE ALPHA; E=1e-06 COG: BS_rpoA; COG0202 DNA-directed RNA polymerase alpha subunit/40 kD; E=1e-08 PFAM: PF01000; Bacterial RNA polymerase, alpha; E=8.2e-15; DNA-directed RNA polymerase alpha chain complement(3753366..3753644) Rhodopirellula baltica SH 1 1790278 NP_867612.1 CDS lplA NC_005027.1 3753783 3754556 R PMID: 10684935 best DB hits: BLAST: pir:B75110; lipoate-protein ligase A related PAB1916 - Pyrococcus; E=7e-10 pir:F72056; lipoate-protein ligase-related protein CP0129 [imported]; E=2e-09 gb:AAK04161.1; AE006244_10 (AE006244) lipoate-protein ligase; E=2e-09 COG: PAB1916; COG0095 Lipoate-protein ligase A; E=7e-11 PFAM: PF02539; Lipoate-protein ligase A; E=0.00023; lipoate-protein ligase A complement(3753783..3754556) Rhodopirellula baltica SH 1 1793570 NP_867613.1 CDS RB7074 NC_005027.1 3754537 3758208 R PMID: 9371463 best DB hits: BLAST: pir:F69192; conserved hypothetical protein MTH695 - Methanobacterium; E=0.003 gb:AAG18647.1; (AE004970) Vng0003c [Halobacterium sp. NRC-1]; E=0.015 embl:CAB89462.1; (AL354048) ABC transporter integral; E=0.024 COG: MTH695; COG0577 Predicted permease; E=3e-04 PFAM: PF01890; CbiG; E=0.096 PF02687; Predicted permease; E=5.7e-06 PF00951; Arterivirus GL envelope glycop; E=0.081; ABC transporter permease complement(3754537..3758208) Rhodopirellula baltica SH 1 1796018 NP_867614.1 CDS RB7077 NC_005027.1 3758205 3758360 R hypothetical protein complement(3758205..3758360) Rhodopirellula baltica SH 1 1793222 NP_867615.1 CDS RB7078 NC_005027.1 3758295 3760328 D best DB hits: PFAM: PF02321; Outer membrane efflux protein; E=0.52; hypothetical protein 3758295..3760328 Rhodopirellula baltica SH 1 1794478 NP_867616.1 CDS RB7080 NC_005027.1 3760290 3760580 R hypothetical protein complement(3760290..3760580) Rhodopirellula baltica SH 1 1790685 NP_867617.1 CDS RB7081 NC_005027.1 3760558 3761379 R PMID: 10360571 best DB hits: BLAST: pir:D72377; oxidoreductase, short chain dehydrogenasereductase; E=7e-38 gb:AAB90046.1; (AE001021) 2-deoxy-D-gluconate 3-dehydrogenase; E=9e-35 swissprot:P39640; YWFD_BACSU HYPOTHETICAL OXIDOREDUCTASE IN; E=2e-33 COG: TM0441; COG1028 Dehydrogenases with different specificities (related; E=6e-39 BS_ywfD; COG1028 Dehydrogenases with different specificities; E=2e-34 BH2491; COG1028 Dehydrogenases with different specificities (related; E=5e-30 PFAM: PF00106; short chain dehydrogenase; E=2.2e-65 PF00678; Short chain dehydrogenase/reduct; E=1.1e-11; short chain dehydrogenase/reductase oxidoreductase complement(3760558..3761379) Rhodopirellula baltica SH 1 1795864 NP_867618.1 CDS RB7082 NC_005027.1 3761407 3761766 R hypothetical protein complement(3761407..3761766) Rhodopirellula baltica SH 1 1796239 NP_867619.1 CDS ppaC NC_005027.1 3761774 3763429 R catalyzes the hydrolysis of pyrophosphate to phosphate; manganese-dependent inorganic pyrophosphatase complement(3761774..3763429) Rhodopirellula baltica SH 1 1795447 NP_867620.1 CDS RB7085 NC_005027.1 3763435 3763662 R hypothetical protein complement(3763435..3763662) Rhodopirellula baltica SH 1 1792517 NP_867621.1 CDS RB7087 NC_005027.1 3763705 3764268 R decarboxylates 4-phosphopantothenoylcysteine to form 4'-phosphopantotheine.; phosphopantothenoylcysteine decarboxylase complement(3763705..3764268) Rhodopirellula baltica SH 1 1792131 NP_867622.1 CDS RB7088 NC_005027.1 3764268 3764540 R hypothetical protein complement(3764268..3764540) Rhodopirellula baltica SH 1 1790449 NP_867623.1 CDS gmk NC_005027.1 3764525 3765154 R PMID: 8390989 best DB hits: BLAST: swissprot:P24234; KGUA_ECOLI GUANYLATE KINASE (GMP KINASE) -----; E=8e-32 gb:AAG58792.1; AE005592_3 (AE005592) guanylate kinase [Escherichia; E=5e-31 pir:C72223; guanylate kinase - Thermotoga maritima (strain MSB8); E=7e-31 COG: gmk; COG0194 Guanylate kinase; E=8e-33 PFAM: PF01583; Adenylylsulfate kinase; E=0.11 PF00005; ABC transporter; E=0.019 PF00485; Phosphoribulokinase / Uridine; E=0.33; guanylate kinase complement(3764525..3765154) Rhodopirellula baltica SH 1 1791914 NP_867624.1 CDS RB7091 NC_005027.1 3765164 3766192 R PMID: 10192928 best DB hits: BLAST: ddbj:BAB06233.1; (AP001515) BH2514~unknown conserved protein; E=2e-32 pir:C82350; conserved hypothetical protein VC0209 [imported] -; E=1e-30 pir:A69878; conserved hypothetical protein yloC - Bacillus subtilis; E=8e-30 COG: BH2514; COG1561 Uncharacterized stress-induced protein; E=2e-33; hypothetical protein complement(3765164..3766192) Rhodopirellula baltica SH 1 1792127 NP_867625.1 CDS RB7093 NC_005027.1 3766189 3766845 R hypothetical protein complement(3766189..3766845) Rhodopirellula baltica SH 1 1796662 NP_867626.1 CDS tpiA NC_005027.1 3766805 3767569 R PMID: 1452037 best DB hits: BLAST: ddbj:BAB07277.1; (AP001519) triosephosphate isomerase [Bacillus; E=6e-61 swissprot:P35144; TPIS_BACME TRIOSEPHOSPHATE ISOMERASE (TIM); E=1e-59 swissprot:P27876; TPIS_BACSU TRIOSEPHOSPHATE ISOMERASE (TIM); E=3e-58 COG: BH3558; COG0149 Triosephosphate isomerase; E=6e-62 PFAM: PF00121; Triosephosphate isomerase; E=3.8e-140; triosephosphate isomerase complement(3766805..3767569) Rhodopirellula baltica SH 1 1792807 NP_867627.1 CDS aroA NC_005027.1 3767566 3768633 R catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; 3-deoxy-7-phosphoheptulonate synthase complement(3767566..3768633) Rhodopirellula baltica SH 1 1796145 NP_867628.1 CDS RB7097 NC_005027.1 3768676 3768837 R hypothetical protein complement(3768676..3768837) Rhodopirellula baltica SH 1 1793974 NP_867629.1 CDS RB7098 NC_005027.1 3768938 3769519 D PMID: 9139909 best DB hits: BLAST: gb:AAC45219.1; (U87308) extracytoplasmic function alternative; E=3e-10 pir:H70507; probable sigE protein - Mycobacterium tuberculosis; E=4e-09 ddbj:BAB03982.1; (AP001507) RNA polymerase ECF-type sigma factor; E=2e-08 COG: Rv1221; COG1595 DNA-directed RNA polymerase specialized sigma; E=4e-10 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=0.028 PF00140; Sigma-70 factor; E=0.00033 PF01381; Helix-turn-helix; E=0.055; ECF family RNA polymerase sigma factor 3768938..3769519 Rhodopirellula baltica SH 1 1794034 NP_867630.1 CDS RB7099 NC_005027.1 3769569 3772226 D PMID: 9278503 best DB hits: BLAST: swissprot:P76481; YFBK_ECOLI HYPOTHETICAL 63.6 KD PROTEIN IN; E=3e-99 embl:CAB75310.1; (AL139164) lipoprotein [Streptomyces; E=4e-54 swissprot:Q55874; Y103_SYNY3 HYPOTHETICAL 45.8 KD PROTEIN SLL0103; E=8e-10 COG: yfbK; COG2304 Protein containing von Willebrand factor (vWF) type A; E=1e-100 sll0103; COG2304 Protein containing von Willebrand factor (vWF) type; E=7e-11 PFAM: PF00092; von Willebrand factor type A domain; E=4.9e-07; hypothetical protein 3769569..3772226 Rhodopirellula baltica SH 1 1796985 NP_867631.1 CDS RB7100 NC_005027.1 3772343 3773137 R PMID: 11792842; hypothetical protein complement(3772343..3773137) Rhodopirellula baltica SH 1 1792167 NP_867632.1 CDS RB7102 NC_005027.1 3773179 3774120 R best DB hits: BLAST: swissprot:Q19200; STO1_CAEEL STO-1 PROTEIN ----- pir: T15971; E=0.006 embl:CAB94650.1; (AL359215) secreted protein.; E=0.039 pir:E72322; conserved hypothetical protein - Thermotoga maritima; E=0.26; hypothetical protein complement(3773179..3774120) Rhodopirellula baltica SH 1 1793203 NP_867633.1 CDS RB7104 NC_005027.1 3774053 3775084 R PMID: 9477341 best DB hits: BLAST: embl:CAB64583.1; (AL135941) hypothetical protein L391.06; E=0.003 gb:AAK04726.1; AE006295_7 (AE006295) conserved hypothetical; E=0.038 ddbj:BAB10843.1; (AB009053) hypersensitive-induced response; E=0.88; hypothetical protein complement(3774053..3775084) Rhodopirellula baltica SH 1 1793992 NP_867634.1 CDS RB7106 NC_005027.1 3775127 3775240 D hypothetical protein 3775127..3775240 Rhodopirellula baltica SH 1 1794106 NP_867635.1 CDS RB7108 NC_005027.1 3775303 3775578 D hypothetical protein 3775303..3775578 Rhodopirellula baltica SH 1 1790089 NP_867636.1 CDS RB7109 NC_005027.1 3775546 3775707 R hypothetical protein complement(3775546..3775707) Rhodopirellula baltica SH 1 1793142 NP_867637.1 CDS RB7110 NC_005027.1 3775658 3775975 D hypothetical protein 3775658..3775975 Rhodopirellula baltica SH 1 1794161 NP_867638.1 CDS pheT NC_005027.1 3775972 3778017 R PMID: 2991205 best DB hits: BLAST: swissprot:P07395; SYFB_ECOLI PHENYLALANYL-TRNA SYNTHETASE BETA; E=3e-78 gb:AAG56700.1; AE005394_9 (AE005394) phenylalanine tRNA; E=6e-78 embl:CAA23565.1; (V00291) phenylalanyl-tRNA synthetase; E=3e-77 COG: pheT_2; COG0072 Phenylalanyl-tRNA synthetase beta subunit; E=3e-79 PFAM: PF01588; tRNA binding domain; E=2.2e-05; phenylalanyl-tRNA synthetase beta chain complement(3775972..3778017) Rhodopirellula baltica SH 1 1790854 NP_867639.1 CDS RB7113 NC_005027.1 3777977 3778117 D hypothetical protein 3777977..3778117 Rhodopirellula baltica SH 1 1794868 NP_867640.1 CDS pheS NC_005027.1 3778209 3779252 R PMID: 6317865 best DB hits: BLAST: embl:CAA23564.1; (V00291) phenylalanyl-tRNA synthetase; E=6e-76 gb:AAA51469.1; (K02844) phenylalanyl-tRNA synthetase; E=6e-76 swissprot:P08312; SYFA_ECOLI PHENYLALANYL-TRNA SYNTHETASE ALPHA; E=3e-75 COG: pheS; COG0016 Phenylalanyl-tRNA synthetase alpha subunit; E=3e-76 PFAM: PF02912; Aminoacyl tRNA synthetase class; E=3.9e-08 PF01409; tRNA synthetases class II (F); E=9.4e-92; phenylalanyl-tRNA synthetase alpha chain complement(3778209..3779252) Rhodopirellula baltica SH 1 1792168 NP_867641.1 CDS rplT NC_005027.1 3779262 3779618 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(3779262..3779618) Rhodopirellula baltica SH 1 1795839 NP_867642.1 CDS RB7116 NC_005027.1 3779586 3779765 D hypothetical protein 3779586..3779765 Rhodopirellula baltica SH 1 1797014 NP_867643.1 CDS rpmI NC_005027.1 3779777 3780322 R PMID: 9823893 best DB hits: BLAST: swissprot:Q9ZCV1; RL35_RICPR 50S RIBOSOMAL PROTEIN L35 -----; E=0.55 PFAM: PF01632; Ribosomal protein L35; E=2.6e-15; 50S ribosomal protein L35 complement(3779777..3780322) Rhodopirellula baltica SH 1 1791232 NP_867644.1 CDS RB7120 NC_005027.1 3780434 3781474 D PMID: 10984043 best DB hits: BLAST: pir:A83355; hypothetical protein PA2336 [imported] - Pseudomonas; E=0.022; hypothetical protein 3780434..3781474 Rhodopirellula baltica SH 1 1792345 NP_867645.1 CDS RB7123 NC_005027.1 3781519 3781962 R PMID: 10567266 best DB hits: BLAST: pir:D75276; response regulator - Deinococcus radiodurans (strain R1); E=4e-14 pir:A75522; response regulator - Deinococcus radiodurans (strain R1); E=8e-14 pir:D75617; response regulator - Deinococcus radiodurans (strain R1); E=4e-13 COG: DR2420; COG0784 CheY-like receiver domains; E=4e-15 sll0921; COG2197 Response regulators consisting of a CheY-like; E=1e-05 VC1349_3; COG0784 CheY-like receiver domains; E=3e-05 PFAM: PF00072; Response regulator receiver doma; E=5.6e-13; response regulator complement(3781519..3781962) Rhodopirellula baltica SH 1 1797057 NP_867646.1 CDS RB7125 NC_005027.1 3781950 3782189 D hypothetical protein 3781950..3782189 Rhodopirellula baltica SH 1 1794135 NP_867647.1 CDS RB7127 NC_005027.1 3782200 3782373 R hypothetical protein complement(3782200..3782373) Rhodopirellula baltica SH 1 1794412 NP_867648.1 CDS RB7128 NC_005027.1 3782370 3782627 R hypothetical protein complement(3782370..3782627) Rhodopirellula baltica SH 1 1796368 NP_867649.1 CDS RB7129 NC_005027.1 3782388 3782618 D hypothetical protein 3782388..3782618 Rhodopirellula baltica SH 1 1791424 NP_867650.1 CDS feoB NC_005027.1 3782615 3784630 D PMID: 8890205 best DB hits: BLAST: pir:F82744; ferrous iron transport protein B XF0933 [imported] -; E=7e-89 pir:T03547; probable ferrous iron transport protein b - Rhodobacter; E=3e-84 gb:AAB91270.1; (AE001111) iron (II) transporter (feoB-2); E=8e-80 COG: XF0933; COG0370 Ferrous ion uptake system protein FeoB (predicted; E=6e-90 PFAM: PF01926; GTPase of unknown function; E=0.029 PF02421; Ferrous iron transport protei; E=1.5e-56; ferrous iron transport protein B 3782615..3784630 Rhodopirellula baltica SH 1 1796247 NP_867651.1 CDS RB7131 NC_005027.1 3784662 3786194 R PMID: 93377076 best DB hits: PFAM: PF02470; mce related protein; E=1.5e-09; hypothetical protein complement(3784662..3786194) Rhodopirellula baltica SH 1 1791398 NP_867652.1 CDS RB7134 NC_005027.1 3786198 3787082 R PMID: 10710307 best DB hits: BLAST: pir:G81022; ABC transporter ATP-binding protein NMB1966 [imported]; E=1e-40 pir:B81966; probable ABC transport ATP-binding protein NMA0485; E=2e-40 swissprot:O06784; MKL_MYCTU POSSIBLE RIBONUCLEOTIDE TRANSPORT; E=1e-38 COG: NMB1966; COG1127 Uncharacterized ABC-type transport system, ATPase; E=1e-41 PA2350; COG1135 Uncharacterized ABC-type transport system ATPase; E=1e-32 XF0421; COG1127 Uncharacterized ABC-type transport system, ATPase; E=3e-32 PFAM: PF00006; ATP synthase alpha/beta family, n; E=0.092 PF00485; Phosphoribulokinase / Uridine kin; E=0.42 PF00005; ABC transporter; E=1.2e-54; ABC transporter ATP-binding protein complement(3786198..3787082) Rhodopirellula baltica SH 1 1793993 NP_867653.1 CDS RB7135 NC_005027.1 3787082 3787972 R PMID: 10984043 best DB hits: BLAST: pir:G71718; hypothetical protein RP096 - Rickettsia prowazekii; E=4e-38 pir:E70331; conserved hypothetical protein aq_355 - Aquifex aeolicus; E=6e-37 pir:S74989; hypothetical protein slr1045 - Synechocystis sp. (strain; E=5e-35 COG: RP096; COG0767 Permease component of an ABC-transporter; E=3e-39 PFAM: PF02405; Domain of unknown function DUF140; E=4.8e-79; ABC transporter permease complement(3787082..3787972) Rhodopirellula baltica SH 1 1790169 NP_867654.1 CDS RB7136 NC_005027.1 3787932 3788138 D hypothetical protein 3787932..3788138 Rhodopirellula baltica SH 1 1795076 NP_867655.1 CDS RB7137 NC_005027.1 3788086 3788256 D hypothetical protein 3788086..3788256 Rhodopirellula baltica SH 1 1795966 NP_867656.1 CDS RB7138 NC_005027.1 3788253 3790112 R PMID: 10731132 best DB hits: BLAST: gb:AAF56315.1; (AE003748) CG13625 gene product [Drosophila; E=0.27; hypothetical protein complement(3788253..3790112) Rhodopirellula baltica SH 1 1796950 NP_867657.1 CDS RB7144 NC_005027.1 3790286 3791179 D PMID: 9384377 best DB hits: BLAST: pir:A70081; conserved hypothetical protein yxkH - Bacillus subtilis; E=2e-10 pir:A82350; conserved hypothetical protein VC0239 [imported] -; E=6e-09 pir:D82751; conserved hypothetical protein XF0878 [imported] -; E=2e-08 COG: BS_yxkH; COG0726 Predicted xylanase/chitin deacetylase; E=2e-11 PFAM: PF01522; Polysaccharide deacetylase; E=0.036; xylanase/chitin deacetylase 3790286..3791179 Rhodopirellula baltica SH 1 1794033 NP_867658.1 CDS RB7146 NC_005027.1 3791176 3792408 D PMID: 10360571 best DB hits: BLAST: pir:E72354; probable hexosyltransferase (EC 2.4.1.-) TM0622 -; E=2e-24 gb:AAD50490.1; AF172324_8 (AF172324) WbnE [Escherichia coli]; E=5e-19 pir:E70036; capsular polysaccharide biosynthesis homolog yveP -; E=1e-18 COG: TM0622; COG0438 Predicted glycosyltransferases; E=2e-25 PFAM: PF00534; Glycosyl transferases group 1; E=1.8e-41; hexosyltransferase 3791176..3792408 Rhodopirellula baltica SH 1 1795403 NP_867659.1 CDS RB7147 NC_005027.1 3792422 3793027 D PMID: 10984043 best DB hits: BLAST: pir:B83329; probable acyltransferase PA2537 [imported] - Pseudomonas; E=1e-38 gb:AAK04085.1; (AE006236) unknown [Pasteurella multocida]; E=3e-33 pir:A82139; conserved hypothetical protein VC1937 [imported] -; E=3e-13 COG: PA2537; COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; E=1e-39 PFAM: PF01553; Acyltransferase; E=6.5e-16; acyltransferase 3792422..3793027 Rhodopirellula baltica SH 1 1790344 NP_867660.1 CDS RB7149 NC_005027.1 3793138 3793926 D signal peptide 3793138..3793926 Rhodopirellula baltica SH 1 1795048 NP_867661.1 CDS RB7151 NC_005027.1 3793943 3795199 R hypothetical protein complement(3793943..3795199) Rhodopirellula baltica SH 1 1796236 NP_867662.1 CDS RB7152 NC_005027.1 3795199 3796536 R PMID: 8843436 best DB hits: BLAST: pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=5e-09 embl:CAB94634.1; (AL359215) secreted glycosyl hydrolase.; E=3e-07 PFAM: PF01302; CAP-Gly domain; E=0.33; secreted glycosyl hydrolase complement(3795199..3796536) Rhodopirellula baltica SH 1 1796659 NP_867663.1 CDS RB7157 NC_005027.1 3796569 3797810 R best DB hits: BLAST: swissprot:Q50695; YM67_MYCTU HYPOTHETICAL 46.1 KDA PROTEIN RV2267C; E=3e-72 pir:B70675; hypothetical protein Rv3529c - Mycobacterium; E=0.001 pir:T31307; type I fatty acid synthase homolog - Cryptosporidium; E=0.17; hypothetical protein complement(3796569..3797810) Rhodopirellula baltica SH 1 1793996 NP_867664.1 CDS RB7161 NC_005027.1 3798000 3798320 D best DB hits: BLAST: pir:D75036; hypothetical protein PAB3319 - Pyrococcus abyssi (strain; E=3e-24 pir:C71127; hypothetical protein PHS025 - Pyrococcus horikoshii; E=1e-17 gb:AAB90424.1; (AE001047) A. fulgidus predicted coding region; E=9e-17 COG: PAB3319; COG1694 Predicted pyrophosphatase; E=3e-25; hypothetical protein 3798000..3798320 Rhodopirellula baltica SH 1 1796259 NP_867665.1 CDS RB7162 NC_005027.1 3798275 3800659 D hypothetical protein 3798275..3800659 Rhodopirellula baltica SH 1 1796409 NP_867666.1 CDS RB7166 NC_005027.1 3800705 3801643 D PMID: 9389475 best DB hits: BLAST: pir:S74476; ABC-type transport protein slr1113 - Synechocystis sp.; E=3e-48 pir:S76626; ABC-type transport protein sll0489 - Synechocystis sp.; E=2e-42 gb:AAB90107.1; (AE001025) ABC transporter ATP-binding protein; E=2e-40 COG: slr1113; COG1131 ABC-type multidrug transport system, ATPase; E=2e-49 BH1054_2; COG0842 Permease component of an ABC-transporter; E=6e-41 PA3672; COG1131 ABC-type multidrug transport system, ATPase; E=2e-39 PFAM: PF00005; ABC transporter; E=9.2e-45; ABC transporter ATP-binding protein 3800705..3801643 Rhodopirellula baltica SH 1 1796544 NP_867667.1 CDS fabZ NC_005027.1 3801693 3802277 D PMID: 7806516 best DB hits: BLAST: gb:AAK04875.1; AE006311_6 (AE006311); E=3e-11 pir:D70065; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase; E=5e-11 gb:AAF98278.1; AF197933_8 (AF197933) beta-hydroxyacyl-ACP; E=9e-11 COG: BS_ywpB; COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier; E=5e-12 PFAM: PF01377; Thioester dehydrase; E=6e-11; hydroxymyristoyl-(acyl carrier protein) dehydratase 3801693..3802277 Rhodopirellula baltica SH 1 1795979 NP_867668.1 CDS acpP NC_005027.1 3802304 3802693 D PMID: 1556094 best DB hits: BLAST: gb:AAC35700.1; (AF041468) acyl carrier protein [Guillardia; E=2e-06 pir:C41609; acyl carrier protein - Cryptomonas sp. chloroplast; E=3e-06 swissprot:P20804; ACP_SYNY3 ACYL CARRIER PROTEIN (ACP) -----; E=1e-05 COG: ssl2084; COG0236 Acyl carrier protein; E=1e-06 PFAM: PF00550; Phosphopantetheine attachment site; E=3.6e-07; acyl carrier protein 3802304..3802693 Rhodopirellula baltica SH 1 1791193 NP_867669.1 CDS fabZ NC_005027.1 3802650 3803231 D PMID: 7806516 best DB hits: BLAST: ddbj:BAB07454.1; (AP001519) hydroxymyristoyl-(acyl carrier; E=4e-09 pir:A70305; (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase; E=5e-09 pir:H71826; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase; E=7e-09 COG: BH3735; COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier; E=4e-10 PFAM: PF01377; Thioester dehydrase; E=0.00031; hydroxymyristoyl-(acyl carrier protein) dehydratase 3802650..3803231 Rhodopirellula baltica SH 1 1795258 NP_867670.1 CDS fabF NC_005027.1 3803238 3804527 D PMID: 7768872 best DB hits: BLAST: ddbj:BAB06601.1; (AP001517) 3-oxoacyl-(acyl-carrier protein); E=4e-93 pir:G69842; 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); E=5e-91 pir:S77464; 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); E=6e-88 COG: BH2882; COG0304 3-oxoacyl-(acyl-carrier-protein) synthase I; E=4e-94 PFAM: PF00109; Beta-ketoacyl synthase, N-ter; E=6.3e-46 PF02801; Beta-ketoacyl synthase, C-ter; E=5.1e-73; 3-oxoacyl-ACP synthase 3803238..3804527 Rhodopirellula baltica SH 1 1790882 NP_867671.1 CDS RB7172 NC_005027.1 3804503 3804709 D hypothetical protein 3804503..3804709 Rhodopirellula baltica SH 1 1790702 NP_867672.1 CDS RB7173 NC_005027.1 3804665 3805858 R PMID: 2198286 best DB hits: BLAST: gb:AAD47627.1; (AF153713) octylprenyl diphosphate synthase-like; E=6e-40 pir:C83075; octaprenyl-diphosphate synthase PA4569 [imported] -; E=8e-40 ddbj:BAA22867.1; (AB001997) solanesyl diphosphate synthase; E=7e-37 COG: PA4569; COG0142 Geranylgeranyl pyrophosphate synthase; E=7e-41 PFAM: PF00348; Polyprenyl synthetase; E=1.4e-49; polyprenyl synthetase complement(3804665..3805858) Rhodopirellula baltica SH 1 1792562 NP_867673.1 CDS MoaC NC_005027.1 3805958 3806569 R PMID: 8361352 best DB hits: BLAST: pir:T46857; molybdenum cofactor biosynthesis protein C [imported] -; E=4e-23 swissprot:P30747; MOAC_ECOLI MOLYBDENUM COFACTOR BIOSYNTHESIS; E=8e-23 pdb:1EKR; A Chain A, Moac Protein From E. Coli; E=1e-22 COG: moaC; COG0315 Molybdenum cofactor biosynthesis enzyme; E=8e-24 PFAM: PF01967; MoaC family; E=4.4e-71; molybdenum cofactor biosynthesis protein C complement(3805958..3806569) Rhodopirellula baltica SH 1 1792527 NP_867674.1 CDS RB7176 NC_005027.1 3806643 3806783 R hypothetical protein complement(3806643..3806783) Rhodopirellula baltica SH 1 1796654 NP_867675.1 CDS RB7177 NC_005027.1 3806784 3806891 R hypothetical protein complement(3806784..3806891) Rhodopirellula baltica SH 1 1789906 NP_867676.1 CDS RB7178 NC_005027.1 3806924 3807061 D hypothetical protein 3806924..3807061 Rhodopirellula baltica SH 1 1795779 NP_867677.1 CDS RB7180 NC_005027.1 3807031 3807345 R hypothetical protein complement(3807031..3807345) Rhodopirellula baltica SH 1 1793091 NP_867678.1 CDS RB7184 NC_005027.1 3807517 3808089 D best DB hits: BLAST: gb:AAD12184.1; (U57900) utilizing regulatory protein tutC; E=4e-04 pir:S76529; hypothetical protein - Synechocystis sp. (strain PCC; E=0.002 embl:CAB88489.1; (AL353816) two-component systen; E=0.003 COG: sll0396; COG0745 Response regulators consisting of a CheY-like; E=2e-04 BB0419_1; COG0784 CheY-like receiver domains; E=8e-04 slr0115; COG0745 Response regulators consisting of a CheY-like; E=8e-04 PFAM: PF00072; Response regulator receiver do; E=0.027; two-component regulatory protein 3807517..3808089 Rhodopirellula baltica SH 1 1792446 NP_867679.1 CDS RB7185 NC_005027.1 3808134 3808352 R hypothetical protein complement(3808134..3808352) Rhodopirellula baltica SH 1 1795399 NP_867680.1 CDS RB7186 NC_005027.1 3808152 3808364 D hypothetical protein 3808152..3808364 Rhodopirellula baltica SH 1 1797189 NP_867681.1 CDS RB7188 NC_005027.1 3808328 3808534 D hypothetical protein 3808328..3808534 Rhodopirellula baltica SH 1 1795429 NP_867682.1 CDS RB7190 NC_005027.1 3808531 3810435 D PMID: 10360571 best DB hits: BLAST: pir:C72374; hypothetical protein TM0467 - Thermotoga maritima; E=3e-16 embl:CAB56681.1; (AL121596) hypothetical protein SCF51A.29c; E=2e-14 embl:CAC01561.1; (AL391039) conserved hypothetical protein; E=4e-14 COG: TM0467; COG2208 Serine phosphatase RsbU, regulator of sigma subunit; E=3e-17 Rv1827; COG1716 FHA-domain-containing proteins; E=1e-09 slr1860_2; COG2208 Serine phosphatase RsbU, regulator of sigma; E=4e-09 PFAM: PF00498; FHA domain; E=1.4e-20 PF01590; GAF domain; E=3.5e-17; regulatory protein 3808531..3810435 Rhodopirellula baltica SH 1 1792042 NP_867683.1 CDS RB7193 NC_005027.1 3810464 3811585 D PMID: 9477341 best DB hits: BLAST: pir:T04014; hypothetical protein F17A8.20 - Arabidopsis thaliana; E=4e-45 pir:T14319; protein AX110P - carrot ----- ddbj: BAA03455.1; E=2e-35 embl:CAB55380.1; (AL117263) oxidoreductase [Leishmania; E=6e-35 COG: BH3843; COG0673 Predicted dehydrogenases and related proteins; E=2e-26 PFAM: PF01408; Oxidoreductase, NAD-bin; E=0.0035 PF02894; Oxidoreductase, C-termi; E=0.11; oxidoreductase 3810464..3811585 Rhodopirellula baltica SH 1 1795094 NP_867684.1 CDS RB7194 NC_005027.1 3811643 3812563 R hypothetical protein complement(3811643..3812563) Rhodopirellula baltica SH 1 1791487 NP_867685.1 CDS RB7195 NC_005027.1 3812570 3812842 R hypothetical protein complement(3812570..3812842) Rhodopirellula baltica SH 1 1793104 NP_867686.1 CDS RB7196 NC_005027.1 3812895 3813479 D PMID: 8905231 best DB hits: BLAST: pir:S74786; hypothetical protein slr1083 - Synechocystis sp. (strain; E=3e-16 embl:CAA77141.1; (Y18353) hypothetical protein [Thermus; E=2e-14 embl:CAA71549.1; (Y10525) arg-ORF1 [Thermus thermophilus]; E=2e-14; hypothetical protein 3812895..3813479 Rhodopirellula baltica SH 1 1795992 NP_867687.1 CDS RB7198 NC_005027.1 3813552 3813956 D PMID: 8905231 best DB hits: BLAST: pir:S74550; hypothetical protein slr0240 - Synechocystis sp. (strain; E=9e-07 swissprot:O07127; YPTY_LACSK HYPOTHETICAL 16.5 KD PROTEIN IN PTSI; E=3e-04 swissprot:Q47839; COPY_ENTHR COPAB ATPASES METAL-FIST TYPE; E=0.052; hypothetical protein 3813552..3813956 Rhodopirellula baltica SH 1 1790170 NP_867688.1 CDS RB7200 NC_005027.1 3813928 3817935 D PMID: 3040663 PMID: 3260234 PMID: 2404938 best DB hits: BLAST: swissprot:P12287; BLAR_BACLI REGULATORY PROTEIN BLAR1 -----; E=1e-12 pir:I39942; penicillinase antirepressor penJ - Bacillus; E=1e-11 swissprot:P26597; MECR_STAEP METHICILLIN RESISTANCE MECR1 PROTEIN; E=6e-05 PFAM: PF02687; Predicted permease; E=0.51; penicillin resistance regulatory protein 3813928..3817935 Rhodopirellula baltica SH 1 1794048 NP_867689.1 CDS RB7201 NC_005027.1 3817957 3819441 R PMID: 3515318 PMID: 6330676 best DB hits: BLAST: swissprot:P07028; UVRC_ECOLI EXCINUCLEASE ABC SUBUNIT C; E=5e-20 ddbj:BAA15733.1; (D90832) Excinuclease ABC subunit C.; E=5e-20 pir:G81845; excinuclease ABC subunit C NMA1540 [imported] -; E=6e-20 COG: NMB1326; COG0322 Nuclease subunit of the excinuclease complex; E=2e-20 PFAM: PF01541; Endo/excinuclease amino terminal; E=1.1e-10 PF02151; UvrB/uvrC motif; E=0.00034; exinuclease ABC subunit C complement(3817957..3819441) Rhodopirellula baltica SH 1 1796219 NP_867690.1 CDS RB7203 NC_005027.1 3819614 3820057 D hypothetical protein 3819614..3820057 Rhodopirellula baltica SH 1 1796274 NP_867691.1 CDS RB7205 NC_005027.1 3820027 3821178 D PMID: 12024217; hypothetical protein 3820027..3821178 Rhodopirellula baltica SH 1 1793057 NP_867692.1 CDS thiC NC_005027.1 3821302 3822627 D required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 3821302..3822627 Rhodopirellula baltica SH 1 1794897 NP_867693.1 CDS RB7207 NC_005027.1 3822537 3822896 D hypothetical protein 3822537..3822896 Rhodopirellula baltica SH 1 1791491 NP_867694.1 CDS RB7208 NC_005027.1 3822824 3823360 D best DB hits: PFAM: PF02151; UvrB/uvrC motif; E=5.6e-08; hypothetical protein 3822824..3823360 Rhodopirellula baltica SH 1 1796688 NP_867695.1 CDS RB7209 NC_005027.1 3823406 3824188 D signal peptide 3823406..3824188 Rhodopirellula baltica SH 1 1790054 NP_867696.1 CDS phoU NC_005027.1 3824196 3824885 R PMID: 98196666 PMID: 9537320 best DB hits: BLAST: swissprot:O67053; PHOU_AQUAE PHOSPHATE TRANSPORT SYSTEM PROTEIN; E=1e-30 swissprot:Q51547; PHOU_PSEAE PHOSPHATE TRANSPORT SYSTEM PROTEIN; E=6e-23 swissprot:Q9Z410; PHOU_PSEPU PHOSPHATE TRANSPORT SYSTEM PROTEIN; E=4e-22 COG: aq_906; COG0704 Phosphate uptake regulator; E=1e-31; phosphate transporter PhoU complement(3824196..3824885) Rhodopirellula baltica SH 1 1792457 NP_867697.1 CDS pstB NC_005027.1 3824962 3825810 R PMID: 96337999 PMID: 8688087 best DB hits: BLAST: swissprot:Q58418; PSTB_METJA PROBABLE PHOSPHATE TRANSPORT; E=2e-84 swissprot:P07655; PSTB_ECOLI PHOSPHATE TRANSPORT ATP-BINDING; E=3e-82 ddbj:BAA22864.1; (D89963) peripheral membrane protein; E=6e-81 COG: MJ1012; COG1117 ABC-type phosphate transport system, ATPase; E=2e-85 pstB; COG1117 ABC-type phosphate transport system, ATPase component; E=3e-83 PA5366; COG1117 ABC-type phosphate transport system, ATPase; E=7e-82 PFAM: PF00005; ABC transporter; E=3.1e-55; phosphate ABC transporter ATP-binding protein complement(3824962..3825810) Rhodopirellula baltica SH 1 1795872 NP_867698.1 CDS pstA NC_005027.1 3825820 3827088 R PMID: 99411980 best DB hits: BLAST: ddbj:BAB06711.1; (AP001517) phosphate ABC transporter (permease); E=1e-26 gb:AAB89888.1; (AE001010) phosphate ABC transporter, permease; E=1e-25 pir:D82504; phosphate ABC transporter, permease VCA0072; E=6e-17 COG: BH2992; COG0581 ABC-type phosphate transport system, permease; E=9e-28 MTH1729; COG0573 ABC-type phosphate transport system, permease; E=1e-16 sll0682; COG0581 ABC-type phosphate transport system, permease; E=4e-16 PFAM: PF00060; Ligand-gated ion channel; E=0.035 PF00528; Binding-protein-dependent transpor; E=1.1e-15; phosphate ABC transporter (permease) complement(3825820..3827088) Rhodopirellula baltica SH 1 1790688 NP_867699.1 CDS pstC NC_005027.1 3827123 3828070 R PMID: 99411980 best DB hits: BLAST: ddbj:BAB06712.1; (AP001517) phosphate ABC transporter (permease); E=2e-59 gb:AAG18997.1; (AE004999) phosphate ABC transporter permease; E=4e-48 gb:AAB89889.1; (AE001010) phosphate ABC transporter, permease; E=1e-46 COG: BH2993; COG0573 ABC-type phosphate transport system, permease; E=2e-60 VCA0072; COG0581 ABC-type phosphate transport system, permease; E=4e-22 HI1382; COG0573 ABC-type phosphate transport system, permease; E=6e-22 PFAM: PF00528; Binding-protein-dependent tran; E=4.3e-11; phosphate ABC transporter (permease) complement(3827123..3828070) Rhodopirellula baltica SH 1 1795137 NP_867700.1 CDS sphX NC_005027.1 3828184 3829116 R PMID: 95075296 PMID: 7741855 best DB hits: BLAST: swissprot:P39665; SPHX_SYNP7 SPHX PROTEIN PRECURSOR ----- pir:; E=9e-59 swissprot:Q55200; SPHX_SYNY3 SPHX PROTEIN HOMOLOG PRECURSOR; E=4e-56 gb:AAB89890.1; (AE001010) phosphate ABC transporter, periplasmic; E=3e-53 COG: sll0679; COG0226 ABC-type phosphate transport system, periplasmic; E=4e-57 PFAM: PF01449; Phosphate-binding protein; E=2.2e-64; phosphate ABC transporter, periplasmic phosphate-binding protein complement(3828184..3829116) Rhodopirellula baltica SH 1 1796467 NP_867701.1 CDS RB7217 NC_005027.1 3829178 3829492 R hypothetical protein complement(3829178..3829492) Rhodopirellula baltica SH 1 1790007 NP_867702.1 CDS RB7219 NC_005027.1 3829476 3829730 R hypothetical protein complement(3829476..3829730) Rhodopirellula baltica SH 1 1790595 NP_867703.1 CDS cstA NC_005027.1 3829745 3831649 R PMID: 99411980 best DB hits: BLAST: ddbj:BAB05512.1; (AP001513) carbon starvation-induced protein; E=3e-82 swissprot:O67304; CSTA_AQUAE CARBON STARVATION PROTEIN A HOMOLOG; E=5e-65 pir:E75032; carbon starvation protein A homolog PAB1554 [similarity]; E=1e-53 COG: BH1793; COG1966 Carbon starvation protein, predicted membrane; E=3e-83 yjiY; COG1966 Carbon starvation protein, predicted membrane protein; E=2e-47 jhp1095; COG1966 Carbon starvation protein, predicted membrane; E=3e-47 PFAM: PF02554; Carbon starvation protein CstA; E=2.2e-104; carbon starvation-induced protein complement(3829745..3831649) Rhodopirellula baltica SH 1 1790568 NP_867704.1 CDS RB7221 NC_005027.1 3831646 3832041 R hypothetical protein complement(3831646..3832041) Rhodopirellula baltica SH 1 1795522 NP_867705.1 CDS trx NC_005027.1 3832051 3833184 D best DB hits: BLAST: gb:AAB64789.1; (U28372) Similar to Thioredoxin reductase (Swiss; E=2e-76 swissprot:P51978; TRXB_NEUCR THIOREDOXIN REDUCTASE ----- pir:; E=5e-75 gb:AAB68856.1; (U00059) Yhr106wp [Saccharomyces cerevisiae]; E=2e-74 COG: YDR353w; COG0492 Thioredoxin reductase/alkyl hydroperoxide reductase; E=1e-77 VNG1259G; COG0492 Thioredoxin reductase/alkyl hydroperoxide; E=5e-53 BS_trxB; COG0492 Thioredoxin reductase/alkyl hydroperoxide reductase; E=4e-48 PFAM: PF02032; Phytoene dehydrogenase related; E=0.056 PF00070; Pyridine nucleotide-disulphide; E=3.1e-09; thioredoxin reductase 3832051..3833184 Rhodopirellula baltica SH 1 1795754 NP_867706.1 CDS RB7224 NC_005027.1 3833201 3833392 D hypothetical protein 3833201..3833392 Rhodopirellula baltica SH 1 1790424 NP_867707.1 CDS RB7225 NC_005027.1 3833484 3834713 R signal peptide complement(3833484..3834713) Rhodopirellula baltica SH 1 1791832 NP_867708.1 CDS RB7228 NC_005027.1 3834777 3836258 R hypothetical protein complement(3834777..3836258) Rhodopirellula baltica SH 1 1796252 NP_867709.1 CDS RB7229 NC_005027.1 3836255 3839446 R signal peptide complement(3836255..3839446) Rhodopirellula baltica SH 1 1794867 NP_867710.1 CDS RB7232 NC_005027.1 3839521 3840168 R best DB hits: BLAST: pir:G69192; ABC transporter (glutamine transport ATP-binding; E=5e-39 pir:A82184; ABC transporter ATP-binding protein VC1568 [imported] -; E=5e-38 pir:H72342; ABC transporter ATP-binding protein - Thermotoga; E=6e-38 COG: MTH696; COG1136 ABC-type (unclassified) transport system, ATPase; E=5e-40 PFAM: PF00005; ABC transporter; E=6.5e-58; glutamine ABC transporter ATP-binding protein complement(3839521..3840168) Rhodopirellula baltica SH 1 1793036 NP_867711.1 CDS RB7233 NC_005027.1 3840182 3840385 D hypothetical protein 3840182..3840385 Rhodopirellula baltica SH 1 1793220 NP_867712.1 CDS RB7235 NC_005027.1 3840505 3841299 D signal peptide 3840505..3841299 Rhodopirellula baltica SH 1 1791262 NP_867713.1 CDS mutS NC_005027.1 3841348 3844023 D This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 3841348..3844023 Rhodopirellula baltica SH 1 1790590 NP_867714.1 CDS RB7238 NC_005027.1 3844063 3845838 R hypothetical protein complement(3844063..3845838) Rhodopirellula baltica SH 1 1790712 NP_867715.1 CDS RB7240 NC_005027.1 3845897 3849013 D best DB hits: BLAST: gb:AAD51954.1; (AF170528) glycoprotein IIb; GPIIb [Oryctolagus; E=0.85; hypothetical protein 3845897..3849013 Rhodopirellula baltica SH 1 1797076 NP_867716.1 CDS RB7243 NC_005027.1 3849010 3849603 D best DB hits: BLAST: gb:AAB40278.1; (U82664) hypothetical protein [Escherichia coli]; E=6e-04; hypothetical protein 3849010..3849603 Rhodopirellula baltica SH 1 1790186 NP_867717.1 CDS ppiB NC_005027.1 3849148 3849579 R PMID: 9317025 best DB hits: BLAST: pir:H82708; peptidyl-prolyl cis-trans isomerase XF1212 [imported] -; E=7e-34 swissprot:O66105; PPIB_TREPA PROBABLE PEPTIDYL-PROLYL CIS-TRANS; E=8e-34 pir:E75543; peptidylprolyl isomerase (EC 5.2.1.8) DR0237; E=1e-30 COG: XF1212; COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) -; E=7e-35 PFAM: PF00160; Cyclophilin type peptidyl-proly; E=1.1e-67; peptidylprolyl isomerase complement(3849148..3849579) Rhodopirellula baltica SH 1 1792847 NP_867718.1 CDS RB7245 NC_005027.1 3849661 3850356 R hypothetical protein complement(3849661..3850356) Rhodopirellula baltica SH 1 1794373 NP_867719.1 CDS RB7246 NC_005027.1 3850393 3850545 D hypothetical protein 3850393..3850545 Rhodopirellula baltica SH 1 1796126 NP_867720.1 CDS glnII NC_005027.1 3850538 3851638 D PMID: 2575672 PMID: 1357539 best DB hits: BLAST: swissprot:P04772; GLN2_BRAJA GLUTAMINE SYNTHETASE II; E=1e-103 swissprot:Q02154; GLN2_RHILP GLUTAMINE SYNTHETASE II; E=1e-99 swissprot:P45626; GLN2_RHIME GLUTAMINE SYNTHETASE II; E=9e-97 COG: YPR035w; COG0174 Glutamine synthase; E=5e-83 PFAM: PF00120; Glutamine synthetase; E=3.6e-133; glutamine synthetase II 3850538..3851638 Rhodopirellula baltica SH 1 1796405 NP_867721.1 CDS RB7248 NC_005027.1 3851674 3851874 D hypothetical protein 3851674..3851874 Rhodopirellula baltica SH 1 1796054 NP_867722.1 CDS RB7249 NC_005027.1 3851887 3852075 D signal peptide 3851887..3852075 Rhodopirellula baltica SH 1 1793249 NP_867723.1 CDS RB7251 NC_005027.1 3852199 3853488 R best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide complement(3852199..3853488) Rhodopirellula baltica SH 1 1795297 NP_867724.1 CDS RB7253 NC_005027.1 3853668 3853847 D hypothetical protein 3853668..3853847 Rhodopirellula baltica SH 1 1792949 NP_867725.1 CDS RB7254 NC_005027.1 3853826 3855910 D PMID: 10801787 best DB hits: BLAST: gb:AAF70456.1; AF221952_1 (AF221952) mu-protocadherin [Rattus; E=0.027 gb:AAF46574.1; (AE003450) CG2908 gene product [Drosophila; E=0.041 gb:AAG16897.1; AF182040_1 (AF182040) LAG protein [Mus musculus]; E=0.29; mu-protocadherin 3853826..3855910 Rhodopirellula baltica SH 1 1790623 NP_867726.1 CDS ileS NC_005027.1 3855873 3859514 D PMID: 97000351 best DB hits: BLAST: pir:T34946; probable isoleucyl-tRNA synthetase - Streptomyces; E=0.0 pir:C81552; isoleucyl-tRNA synthetase CP0665 [imported] -; E=0.0 swissprot:Q9Z972; SYI_CHLPN ISOLEUCYL-TRNA SYNTHETASE; E=0.0 COG: CPn0109; COG0060 Isoleucyl-tRNA synthetase; E=0.0 PFAM: PF00133; tRNA synthetases class I (I, L, M; E=1.8e-132; isoleucyl-tRNA synthetase 3855873..3859514 Rhodopirellula baltica SH 1 1791528 NP_867727.1 CDS pur3 NC_005027.1 3859511 3860110 D PMID: 95004650 best DB hits: BLAST: embl:CAA52779.2; (X74767) phosphoribosylglycinamide; E=1e-25 swissprot:P52422; PUR3_ARATH PHOSPHORIBOSYLGLYCINAMIDE; E=1e-25 pir:T11574; phosphoribosylglycinamide formyltransferase (EC 2.1.2.2); E=2e-25 COG: aq_857; COG0299 Folate-dependent phosphoribosylglycinamide; E=1e-23 VC1992; COG0788 Formyltetrahydrofolate hydrolase; E=9e-12 Cj0187c; COG0299 Folate-dependent phosphoribosylglycinamide; E=4e-11 PFAM: PF00551; Formyl transferase; E=2.9e-41; phosphoribosylglycinamide formyltransferase 3859511..3860110 Rhodopirellula baltica SH 1 1790694 NP_867728.1 CDS RB7262 NC_005027.1 3860241 3860393 D hypothetical protein 3860241..3860393 Rhodopirellula baltica SH 1 1792328 NP_867729.1 CDS RB7263 NC_005027.1 3860323 3862392 D PMID: 98196666 best DB hits: BLAST: pir:D70370; hypothetical protein aq_808 - Aquifex aeolicus -----; E=1e-05 PFAM: PF00430; ATP synthase B/B' CF(0); E=0.87; hypothetical protein 3860323..3862392 Rhodopirellula baltica SH 1 1795287 NP_867730.1 CDS RB7267 NC_005027.1 3862389 3864095 D signal peptide 3862389..3864095 Rhodopirellula baltica SH 1 1796191 NP_867731.1 CDS RB7271 NC_005027.1 3864352 3864549 R signal peptide complement(3864352..3864549) Rhodopirellula baltica SH 1 1793777 NP_867732.1 CDS RB7273 NC_005027.1 3864417 3864770 D hypothetical protein 3864417..3864770 Rhodopirellula baltica SH 1 1791435 NP_867733.1 CDS ectB NC_005027.1 3864816 3866180 D catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde; diaminobutyrate--2-oxoglutarate aminotransferase 3864816..3866180 Rhodopirellula baltica SH 1 1792137 NP_867734.1 CDS RB7276 NC_005027.1 3866177 3868927 D PMID: 20392447 best DB hits: BLAST: embl:CAC01604.1; (AJ269505) peptide synthetase [Anabaena sp. 90]; E=4e-91 embl:CAC11137.1; (AJ250581) NikP1 protein [Streptomyces tendae]; E=9e-91 gb:AAF17281.1; (AF204805) NosD [Nostoc sp. GSV224]; E=4e-89 COG: PA2424_3; COG1020 Non-ribosomal peptide synthetase modules and related; E=9e-85 BS_ppsC_1; COG1020 Non-ribosomal peptide synthetase modules and; E=5e-83 BS_dhbF; COG1020 Non-ribosomal peptide synthetase modules and related; E=2e-81 PFAM: PF00501; AMP-binding enzyme; E=2.2e-131 PF00550; Phosphopantetheine attachment; E=3.1e-21 PF00561; alpha/beta hydrolase fold; E=0.22; peptide synthetase 3866177..3868927 Rhodopirellula baltica SH 1 1792236 NP_867735.1 CDS RB7277 NC_005027.1 3868924 3869907 D best DB hits: BLAST: pir:T45719; hypothetical protein F1P2.140 - Arabidopsis thaliana; E=0.014 pir:G82643; conserved hypothetical protein XF1745 [imported] -; E=0.023 pir:T45716; hypothetical protein F1P2.110 - Arabidopsis thaliana; E=0.072 COG: XF1745; COG1073 Hydrolases of the alpha/beta superfamily; E=0.002; hypothetical protein 3868924..3869907 Rhodopirellula baltica SH 1 1795184 NP_867736.1 CDS RB7279 NC_005027.1 3870019 3870309 D hypothetical protein 3870019..3870309 Rhodopirellula baltica SH 1 1791323 NP_867737.1 CDS RB7280 NC_005027.1 3870457 3870762 D hypothetical protein 3870457..3870762 Rhodopirellula baltica SH 1 1793806 NP_867738.1 CDS RB7283 NC_005027.1 3870834 3871508 D signal peptide 3870834..3871508 Rhodopirellula baltica SH 1 1796448 NP_867739.1 CDS RB7284 NC_005027.1 3871505 3871639 D hypothetical protein 3871505..3871639 Rhodopirellula baltica SH 1 1794506 NP_867740.1 CDS htrB NC_005027.1 3871636 3872637 D PMID: 20365717 PMID: 10910347 best DB hits: BLAST: pir:E82847; lipid A biosynthesis lauroyl acyltransferase XF0104; E=8e-07 pir:A81318; probable lipid A biosynthesis lauroyl acyltransferase; E=2e-06 gb:AAG43974.1; AF215659_2 (AF215659) acyltransferase; E=1e-05 COG: XF0104; COG1560 Lauroyl/myristoyl acyltransferase involved in lipid; E=8e-08 RP718; COG1560 Lauroyl/myristoyl acyltransferase involved in lipid A; E=4e-04 CPn0098; COG1560 Lauroyl/myristoyl acyltransferase involved in lipid; E=0.005; lipid A biosynthesis lauroyl acyltransferase 3871636..3872637 Rhodopirellula baltica SH 1 1795590 NP_867741.1 CDS RB7287 NC_005027.1 3872677 3873726 R PMID: 11214968 best DB hits: BLAST: pir:C72369; hypothetical protein TM0484 - Thermotoga maritima; E=6e-08 ddbj:BAB06401.1; (AP001516) thiamine biosynthesis [Bacillus; E=0.009 pir:H72008; ABC transporter permease - Chlamydophila pneumoniae; E=0.42 COG: TM0484; COG0715 ABC-type nitrate/sulfonate/taurine/bicarbonate; E=6e-09; ABC transporter permease complement(3872677..3873726) Rhodopirellula baltica SH 1 1791546 NP_867742.1 CDS RB7288 NC_005027.1 3873723 3874538 R best DB hits: BLAST: gb:AAK03349.1; (AE006165) unknown [Pasteurella multocida]; E=1e-19 pir:F83207; probable permease of ABC transporter PA3512 [imported] -; E=2e-19 ddbj:BAB06400.1; (AP001516) ABC transporter (permease) [Bacillus; E=6e-19 COG: PA3512; COG0600 ABC-type nitrate/sulfonate/taurine/bicarbonate; E=2e-20 PA5095; COG1174 ABC-type proline/glycine betaine transport systems,; E=1e-09 CT854_1; COG0600 ABC-type nitrate/sulfonate/taurine/bicarbonate; E=2e-09 PFAM: PF00528; Binding-protein-dependent transpor; E=0.003; ABC transporter permease complement(3873723..3874538) Rhodopirellula baltica SH 1 1791985 NP_867743.1 CDS cysA NC_005027.1 3874535 3875434 R PMID: 90264334 PMID: 2188958 best DB hits: BLAST: swissprot:P16676; CYSA_ECOLI SULFATE TRANSPORT ATP-BINDING PROTEIN; E=2e-33 gb:AAG57540.1; AE005472_7 (AE005472) ATP-binding component of; E=2e-33 ddbj:BAA21795.1; (AB000100) malK-like protein [Synechococcus sp.]; E=7e-33 COG: cysA; COG1118 ABC-type sulfate/molybdate transport systems, ATPase; E=1e-34 NMB0879; COG1118 ABC-type sulfate/molybdate transport systems,; E=6e-33 VC0541; COG1118 ABC-type sulfate/molybdate transport systems, ATPase; E=8e-33 PFAM: PF00071; Ras family; E=0.11 PF00004; ATPase associated with var; E=0.012 PF00005; ABC transporter; E=4.2e-47; sulfate ABC transport ATP-binding protein complement(3874535..3875434) Rhodopirellula baltica SH 1 1793257 NP_867744.1 CDS RB7290 NC_005027.1 3875447 3875566 R hypothetical protein complement(3875447..3875566) Rhodopirellula baltica SH 1 1792823 NP_867745.1 CDS RB7292 NC_005027.1 3875577 3876347 D PMID: 98332770 best DB hits: BLAST: pir:A71318; conserved hypothetical protein TP0489 - syphilis; E=9e-05 gb:AAB90300.1; (AE001039) conserved hypothetical protein; E=1e-04 pir:S74614; hypothetical protein sll1036 - Synechocystis sp. (strain; E=0.001 COG: TP0489; COG1235 Metal-dependent hydrolases of the beta-lactamase; E=8e-06 AF0939; COG1234 Metal-dependent hydrolases of the beta-lactamase; E=1e-05 sll1036; COG1235 Metal-dependent hydrolases of the beta-lactamase; E=1e-04; hypothetical protein 3875577..3876347 Rhodopirellula baltica SH 1 1791304 NP_867746.1 CDS gdh NC_005027.1 3876391 3877239 R PMID: 20479972 best DB hits: BLAST: embl:CAC11337.1; (AL445063) probable glucose 1-dehydrogenase; E=5e-28 ddbj:BAB20935.2; (D85817) ORF [Staphylococcus aureus]; E=2e-27 ddbj:BAB06210.1; (AP001515) 3-oxoacyl-(acyl-carrier protein); E=2e-27 COG: Ta0191; COG1028 Dehydrogenases with different specificities (related; E=5e-29 BS_ycdF; COG1028 Dehydrogenases with different specificities; E=3e-27 yohF; COG1028 Dehydrogenases with different specificities (related; E=5e-26 PFAM: PF02882; Tetrahydrofolate dehydrogenase/; E=0.28 PF00106; short chain dehydrogenase; E=2.2e-53 PF00678; Short chain dehydrogenase/reduc; E=8.9e-10; glucose 1-dehydrogenase complement(3876391..3877239) Rhodopirellula baltica SH 1 1793500 NP_867747.1 CDS RB7296 NC_005027.1 3877224 3877472 D hypothetical protein 3877224..3877472 Rhodopirellula baltica SH 1 1796116 NP_867748.1 CDS RB7297 NC_005027.1 3877465 3878073 D PMID: 20406833 best DB hits: BLAST: pir:D82096; hypothetical protein VC2280 [imported] - Vibrio cholerae; E=1e-25 pir:C82997; hypothetical protein PA5196 [imported] - Pseudomonas; E=6e-13 pir:B82234; hypothetical protein VC1162 [imported] - Vibrio cholerae; E=3e-07; hypothetical protein 3877465..3878073 Rhodopirellula baltica SH 1 1791754 NP_867749.1 CDS RB7298 NC_005027.1 3878094 3878213 R hypothetical protein complement(3878094..3878213) Rhodopirellula baltica SH 1 1796419 NP_867750.1 CDS rimK NC_005027.1 3878200 3879417 D PMID: 20437337 best DB hits: BLAST: pir:D82997; ribosomal protein S6 modification protein PA5197; E=3e-76 pir:E82096; ribosomal protein S6 modification protein VC2281; E=2e-74 swissprot:P17116; RIMK_ECOLI RIBOSOMAL PROTEIN S6 MODIFICATION; E=1e-60 COG: PA5197; COG0189 Glutathione synthase/Ribosomal protein S6; E=3e-77 rimK; COG0189 Glutathione synthase/Ribosomal protein S6 modification; E=1e-61 HI1531; COG0189 Glutathione synthase/Ribosomal protein S6; E=2e-50 PFAM: PF02080; Potassium channel; E=3.8e-10; ribosomal protein S6 modification protein 3878200..3879417 Rhodopirellula baltica SH 1 1791140 NP_867751.1 CDS lpxK NC_005027.1 3879390 3880487 R PMID: 9268317 best DB hits: BLAST: pir:E83274; tetraacyldisaccharide 4*-kinase PA2981 [imported] -; E=4e-25 pir:C82146; probable tetraacyldisaccharide 4'-kinase (EC 2.7.1.130); E=2e-23 pir:C70443; conserved hypothetical protein aq_1656 - Aquifex; E=2e-22 COG: PA2981; COG1663 Lipid A biosynthesis protein LpxK,; E=3e-26 sll0572; COG2403 Uncharacterized ACR; E=0.002 PFAM: PF02606; Tetraacyldisaccharide-1-P 4'-kinase; E=1.6e-13; tetraacyldisaccharide 4-kinase complement(3879390..3880487) Rhodopirellula baltica SH 1 1795126 NP_867752.1 CDS RB7301 NC_005027.1 3880484 3883120 R PMID: 97000351 best DB hits: BLAST: embl:CAB88936.1; (AL353863) helicase [Streptomyces; E=3e-43 swissprot:Q10701; HELY_MYCTU HELICASE HELY ----- pir:; E=5e-43 embl:CAA22943.1; (AL035310) helicase [Mycobacterium; E=2e-41 COG: Rv2092c; COG0513 Superfamily II DNA and RNA helicases; E=5e-44 Ta0835; COG1204 Predicted helicases; E=9e-28 YLR398c; COG0513 Superfamily II DNA and RNA helicases; E=4e-26 PFAM: PF00004; ATPase associated with vari; E=0.0005 PF01695; IstB-like ATP binding protein; E=0.0061 PF00270; DEAD/DEAH box helicase; E=1.2e-29; helicase complement(3880484..3883120) Rhodopirellula baltica SH 1 1792323 NP_867753.1 CDS RB7303 NC_005027.1 3883041 3883526 D hypothetical protein 3883041..3883526 Rhodopirellula baltica SH 1 1791995 NP_867754.1 CDS livK NC_005027.1 3883565 3884809 D PMID: 97404404 best DB hits: BLAST: pir:T03460; probable leucineisoleucine/valine-binding protein; E=1e-36 pir:H75444; branched-chain amino acid ABC transporter, periplasmic; E=4e-04 pir:G75579; branched-chain amino acid ABC transporter, periplasmic; E=9e-04 COG: DR1038; COG0683 Periplasmic leucine/isoleucine/valine-binding; E=4e-05; leucine/isoleucine/valine-binding protein precursor 3883565..3884809 Rhodopirellula baltica SH 1 1790794 NP_867755.1 CDS RB7308 NC_005027.1 3884802 3887642 D PMID: 20406833 best DB hits: BLAST: pir:H83285; probable two-component sensor PA2882 [imported] -; E=2e-36 pir:F83324; probable two-component sensor PA2571 [imported] -; E=3e-36 pir:D82244; sensory box sensor histidine kinase VC1084 [imported] -; E=7e-34 COG: PA2882; COG0642 Sensory transduction histidine kinases; E=2e-37 PFAM: PF00785; PAC motif; E=5.1e-05 PF00512; His Kinase A (phosphoacceptor); E=0.0012 PF02518; Histidine kinase-, DNA gyrase B; E=5.2e-32; sensory box sensor histidine kinase 3884802..3887642 Rhodopirellula baltica SH 1 1793106 NP_867756.1 CDS RB7309 NC_005027.1 3887699 3891646 R hypothetical protein complement(3887699..3891646) Rhodopirellula baltica SH 1 1793728 NP_867757.1 CDS RB7312 NC_005027.1 3891704 3891868 R hypothetical protein complement(3891704..3891868) Rhodopirellula baltica SH 1 1791807 NP_867758.1 CDS RB7313 NC_005027.1 3891942 3892097 R hypothetical protein complement(3891942..3892097) Rhodopirellula baltica SH 1 1795766 NP_867759.1 CDS rbsB NC_005027.1 3892096 3893412 D PMID: 97000351 PMID: 8843436 best DB hits: BLAST: embl:CAB66286.1; (AL136519) bifunctional carbohydrate binding and; E=2e-20 gb:AAK03409.1; (AE006170) unknown [Pasteurella multocida]; E=4e-20 pir:A72417; sugar ABC transporter, periplasmic sugar-binding protein; E=3e-19 COG: TM0114; COG1879 Periplasmic sugar-binding proteins; E=3e-20 PFAM: PF00532; Periplasmic binding proteins; E=0.038; bifunctional carbohydrate binding and transport protein 3892096..3893412 Rhodopirellula baltica SH 1 1796472 NP_867760.1 CDS RB7316 NC_005027.1 3893409 3893522 D hypothetical protein 3893409..3893522 Rhodopirellula baltica SH 1 1790270 NP_867761.1 CDS deaD NC_005027.1 3893519 3894877 D PMID: 99411980 best DB hits: BLAST: ddbj:BAB06103.1; (AP001515) ATP-dependent RNA helicase [Bacillus; E=3e-85 pir:D69772; ATP-dependent RNA helicase homolog ydbR - Bacillus; E=2e-81 gb:AAD20136.1; (AF091502) autoaggregation-mediating protein; E=2e-79 COG: BH2384; COG0513 Superfamily II DNA and RNA helicases; E=3e-86 PFAM: PF00270; DEAD/DEAH box helicase; E=5.5e-71 PF00271; Helicase conserved C-terminal doma; E=1.5e-31; ATP-dependent RNA helicase 3893519..3894877 Rhodopirellula baltica SH 1 1795329 NP_867762.1 CDS RB7318 NC_005027.1 3894884 3895264 R hypothetical protein complement(3894884..3895264) Rhodopirellula baltica SH 1 1795269 NP_867763.1 CDS RB7319 NC_005027.1 3895261 3895491 R hypothetical protein complement(3895261..3895491) Rhodopirellula baltica SH 1 1793913 NP_867764.1 CDS RB7321 NC_005027.1 3895351 3913824 D best DB hits: BLAST: ddbj:BAB10333.1; (AB016872) gene_id:K21P3.2~unknown protein; E=0.089 PFAM: PF00028; Cadherin domain; E=0.14 PF00797; N-acetyltransferase; E=0.3 PF00404; Dockerin type I repeat; E=0.045; hypothetical protein 3895351..3913824 Rhodopirellula baltica SH 1 1793545 NP_867765.1 CDS RB7341 NC_005027.1 3913925 3936541 D PMID: 93125117 PMID: 1479886 PMID: 7891560 best DB hits: BLAST: pir:S61441; surface-associated protein cshA precursor - Streptococcus; E=0.006 PFAM: PF00404; Dockerin type I repeat; E=0.039; surface-associated protein cshA precursor 3913925..3936541 Rhodopirellula baltica SH 1 1792145 NP_867766.1 CDS proA NC_005027.1 3936698 3938002 D PMID: 20437337 best DB hits: BLAST: pir:C83147; gamma-glutamyl phosphate reductase PA4007 [imported] -; E=8e-97 swissprot:O67166; PROA_AQUAE GAMMA-GLUTAMYL PHOSPHATE REDUCTASE; E=1e-96 gb:AAK05706.1; AE006391_5 (AE006391) gamma-glutamyl phosphate; E=4e-96 COG: PA4007; COG0014 Gamma-glutamyl phosphate reductase; E=8e-98 VC2033_1; COG1012 NAD-dependent aldehyde dehydrogenases; E=0.001 PFAM: PF00171; Aldehyde dehydrogenase; E=0.0046; gamma-glutamyl phosphate reductase 3936698..3938002 Rhodopirellula baltica SH 1 1796185 NP_867767.1 CDS fliM NC_005027.1 3938010 3939296 D PMID: 96345631 PMID: 8755894 best DB hits: BLAST: swissprot:P74927; FLIM_TREPA FLAGELLAR MOTOR SWITCH PROTEIN FLIM; E=7e-47 swissprot:Q57511; FLIM_BORBU FLAGELLAR MOTOR SWITCH PROTEIN FLIM; E=5e-46 ddbj:BAB06165.1; (AP001515) flagellar motor switch protein; E=3e-44 COG: TP0721; COG1868 Flagellar motor switch protein; E=7e-48 PFAM: PF02154; Flagellar motor switch protein FliM; E=1.3e-68 PF01052; Surface presentation of antigens (S; E=0.19; flagellar motor switch protein fliM 3938010..3939296 Rhodopirellula baltica SH 1 1793056 NP_867768.1 CDS RB7361 NC_005027.1 3939365 3939496 R hypothetical protein complement(3939365..3939496) Rhodopirellula baltica SH 1 1791870 NP_867769.1 CDS RB7362 NC_005027.1 3939501 3939758 R PMID: 99303335 best DB hits: BLAST: gb:AAD28578.1; AF121341_2 (AF121341) response regulator; E=0.69; response regulator CelR2 complement(3939501..3939758) Rhodopirellula baltica SH 1 1791891 NP_867770.1 CDS RB7363 NC_005027.1 3939802 3940212 D hypothetical protein 3939802..3940212 Rhodopirellula baltica SH 1 1792904 NP_867771.1 CDS RB7364 NC_005027.1 3940103 3941347 D signal peptide 3940103..3941347 Rhodopirellula baltica SH 1 1795067 NP_867772.1 CDS degP NC_005027.1 3941421 3943328 D PMID: 99287316 best DB hits: BLAST: pir:F72359; periplasmic serine proteinase Do (EC 3.4.21.-) -; E=6e-26 pir:B81728; serine proteinase, HtrADegQ/DegS family TC0210; E=6e-25 swissprot:P18584; DEGP_CHLTR PROBABLE SERINE PROTEASE DO-LIKE; E=7e-25 COG: TM0571; COG0265 Trypsin-like serine proteases, typically; E=5e-27 CT823; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=6e-26 Cj1228c; COG0265 Trypsin-like serine proteases, typically; E=8e-26 PFAM: PF00089; Trypsin; E=1.7e-09 PF00595; PDZ domain (Also known as DHR or GLG; E=0.0017; periplasmic serine proteinase DO 3941421..3943328 Rhodopirellula baltica SH 1 1793384 NP_867773.1 CDS degP NC_005027.1 3943271 3944404 D PMID: 20150255 best DB hits: BLAST: pir:B81728; serine proteinase, HtrADegQ/DegS family TC0210; E=1e-16 swissprot:P18584; DEGP_CHLTR PROBABLE SERINE PROTEASE DO-LIKE; E=2e-16 swissprot:Q9Z6T0; DEGP_CHLPN PROBABLE SERINE PROTEASE DO-LIKE; E=1e-15 COG: CT823; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=2e-17 CPn0979; COG0265 Trypsin-like serine proteases, typically; E=1e-16 RP124; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=3e-08 PFAM: PF00595; PDZ domain (Also known as DHR or GL; E=1.4e-09; serine protease 3943271..3944404 Rhodopirellula baltica SH 1 1796672 NP_867774.1 CDS degP NC_005027.1 3944401 3946470 D PMID: 21145866 best DB hits: BLAST: gb:AAK02818.1; (AE006110) HtrA [Pasteurella multocida]; E=4e-23 swissprot:P45129; HTOA_HAEIN PROBABLE PERIPLASMIC SERINE PROTEASE; E=1e-21 gb:AAC38202.1; (AF018151) HtrA [Haemophilus influenzae]; E=2e-21 COG: HI1259; COG0265 Trypsin-like serine proteases, typically; E=1e-22 htrA; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=2e-17 NMB0532; COG0265 Trypsin-like serine proteases, typically; E=2e-17 PFAM: PF00595; PDZ domain (Also known as DHR or GLG; E=8.4e-09; HtrA family serine protease 3944401..3946470 Rhodopirellula baltica SH 1 1796058 NP_867775.1 CDS RB7374 NC_005027.1 3946584 3947570 D PMID: 12101309 best DB hits: BLAST: pir:S76547; hypothetical protein - Synechocystis sp. (strain PCC; E=0.020 pir:C71559; probable outer membrane leader peptide CT073 - Chlamydia; E=0.27 pir:A81713; conserved hypothetical protein TC0345 [imported] -; E=0.41; hypothetical protein 3946584..3947570 Rhodopirellula baltica SH 1 1791396 NP_867776.1 CDS pepT NC_005027.1 3947593 3948831 R catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T complement(3947593..3948831) Rhodopirellula baltica SH 1 1796328 NP_867777.1 CDS RB7376 NC_005027.1 3948828 3949460 R PMID: 10567266 best DB hits: BLAST: gb:AAF12632.1; AE001826_101 (AE001826) hypothetical protein; E=0.29; hypothetical protein complement(3948828..3949460) Rhodopirellula baltica SH 1 1791433 NP_867778.1 CDS RB7381 NC_005027.1 3949595 3950326 R hypothetical protein complement(3949595..3950326) Rhodopirellula baltica SH 1 1792230 NP_867779.1 CDS RB7382 NC_005027.1 3950426 3951508 R PMID: 11214968; hypothetical protein complement(3950426..3951508) Rhodopirellula baltica SH 1 1793001 NP_867780.1 CDS RB7383 NC_005027.1 3951505 3951717 R signal peptide complement(3951505..3951717) Rhodopirellula baltica SH 1 1795148 NP_867781.1 CDS sprE NC_005027.1 3951653 3952438 R PMID: 98044033 best DB hits: BLAST: pir:E70007; sepiapterin reductase homolog yueD - Bacillus subtilis; E=2e-09 pir:B70407; alcohol dehydrogenase - Aquifex aeolicus ----- gb:; E=3e-09 gb:AAF48896.1; (AE003510) CG7322 gene product [Drosophila; E=5e-08 COG: BS_yueD; COG1028 Dehydrogenases with different specificities; E=2e-10 XF0145; COG0300 Short-chain dehydrogenases of various substrate; E=2e-07 YIR035c; COG1028 Dehydrogenases with different specificities; E=3e-07 PFAM: PF00106; short chain dehydrogenase; E=2.7e-12; sepiapterin reductase complement(3951653..3952438) Rhodopirellula baltica SH 1 1793292 NP_867782.1 CDS RB7386 NC_005027.1 3952464 3952583 R hypothetical protein complement(3952464..3952583) Rhodopirellula baltica SH 1 1793204 NP_867783.1 CDS y4qJ NC_005027.1 3952745 3953593 D PMID: 9163424 best DB hits: BLAST: swissprot:P55632; Y4QK_RHISN INTEGRASERECOMBINASE Y4QK; E=7e-25 swissprot:P55429; Y4EF_RHISN INTEGRASERECOMBINASE Y4EF; E=5e-24 prf:2115270D; integrase [Weeksella zoohelcum]; E=4e-18 COG: PAB0255; COG0582 Integrase; E=1e-15 PFAM: PF00589; Phage integrase; E=2.6e-19; integrase/recombinase y4qk 3952745..3953593 Rhodopirellula baltica SH 1 1793567 NP_867784.1 CDS y4qJ NC_005027.1 3953590 3954717 D PMID: 9163424 best DB hits: BLAST: swissprot:P55631; Y4QJ_RHISN TRANSPOSASE Y4QJ -----; E=7e-39 prf:2115270C; transposase [Weeksella zoohelcum]; E=6e-35 pir:S23782; transposase tnpA (insertion sequence IS91) - Escherichia; E=5e-14; transposase y4qj 3953590..3954717 Rhodopirellula baltica SH 1 1794008 NP_867785.1 CDS RB7390 NC_005027.1 3954342 3954968 D hypothetical protein 3954342..3954968 Rhodopirellula baltica SH 1 1790636 NP_867786.1 CDS RB7392 NC_005027.1 3955080 3955364 R hypothetical protein complement(3955080..3955364) Rhodopirellula baltica SH 1 1794170 NP_867787.1 CDS RB7393 NC_005027.1 3955353 3955553 D hypothetical protein 3955353..3955553 Rhodopirellula baltica SH 1 1792784 NP_867788.1 CDS RB7394 NC_005027.1 3955527 3955937 R hypothetical protein complement(3955527..3955937) Rhodopirellula baltica SH 1 1793890 NP_867789.1 CDS RB7395 NC_005027.1 3955956 3956351 D best DB hits: BLAST: swissprot:P08047; SP1_HUMAN TRANSCRIPTION FACTOR SP1 -----; E=0.76; transcription factor SP1 3955956..3956351 Rhodopirellula baltica SH 1 1793591 NP_867790.1 CDS RB7397 NC_005027.1 3956438 3956551 R hypothetical protein complement(3956438..3956551) Rhodopirellula baltica SH 1 1795408 NP_867791.1 CDS RB7398 NC_005027.1 3956615 3957253 R best DB hits: PFAM: PF00903; Glyoxalase/Bleomycin resistance pr; E=0.0062; hypothetical protein complement(3956615..3957253) Rhodopirellula baltica SH 1 1791009 NP_867792.1 CDS y4qK NC_005027.1 3957300 3958685 R PMID: 97305956 PMID: 9163424 best DB hits: BLAST: swissprot:P55632; Y4QK_RHISN INTEGRASERECOMBINASE Y4QK; E=6e-37 prf:2115270D; integrase [Weeksella zoohelcum]; E=1e-35 swissprot:P55429; Y4EF_RHISN INTEGRASERECOMBINASE Y4EF; E=2e-33 COG: MTH893; COG0582 Integrase; E=1e-31 PFAM: PF02899; Phage integrase, N-terminal S; E=0.0062 PF00589; Phage integrase; E=4.2e-40; integrase/recombinase Y4QK complement(3957300..3958685) Rhodopirellula baltica SH 1 1791585 NP_867793.1 CDS RB7401 NC_005027.1 3958756 3959001 D hypothetical protein 3958756..3959001 Rhodopirellula baltica SH 1 1794668 NP_867794.1 CDS RB7402 NC_005027.1 3959074 3959751 D hypothetical protein 3959074..3959751 Rhodopirellula baltica SH 1 1797166 NP_867795.1 CDS RB7404 NC_005027.1 3959805 3960737 R PMID: 98416126 best DB hits: BLAST: pir:T44684; hypothetical protein Cbi [imported] - Bacillus; E=6e-22 ddbj:BAB05215.1; (AP001512) BH1496~unknown conserved protein; E=2e-19 pir:S75947; hypothetical protein - Synechocystis sp. (strain PCC; E=3e-19 COG: BH1496; COG2138 Uncharacterized ACR; E=2e-20; hypothetical protein complement(3959805..3960737) Rhodopirellula baltica SH 1 1792849 NP_867796.1 CDS RB7406 NC_005027.1 3960764 3961156 R signal peptide complement(3960764..3961156) Rhodopirellula baltica SH 1 1790535 NP_867797.1 CDS ctpA NC_005027.1 3961365 3962852 R PMID: 98196666 best DB hits: BLAST: pir:F70369; carboxyl-terminal proteinase - Aquifex aeolicus -----; E=4e-49 swissprot:Q44879; CTPA_BARBA CARBOXY-TERMINAL PROCESSING PROTEASE; E=7e-49 pir:B83005; probable carboxyl-terminal proteinase PA5134 [imported]; E=7e-47 COG: aq_797; COG0793 Periplasmic protease; E=3e-50 PFAM: PF00595; PDZ domain (Also known as DHR or GLG; E=0.0011; carboxyl-terminal proteinase complement(3961365..3962852) Rhodopirellula baltica SH 1 1795722 NP_867798.1 CDS RB7409 NC_005027.1 3962837 3963070 R hypothetical protein complement(3962837..3963070) Rhodopirellula baltica SH 1 1792800 NP_867799.1 CDS RB7410 NC_005027.1 3963019 3964356 R best DB hits: BLAST: embl:CAB37946.1; (AJ133131) histidine kinase (PhoR1); E=2e-43 swissprot:P35164; RESE_BACSU SENSOR PROTEIN RESE ----- pir:; E=7e-40 embl:CAB64973.1; (AJ012050) VicK protein [Enterococcus faecalis]; E=1e-38 COG: BH4026; COG0642 Sensory transduction histidine kinases; E=2e-39 PFAM: PF00989; PAS domain; E=0.0015 PF00512; His Kinase A (phosphoacceptor) doma; E=9.2e-20 PF02518; Histidine kinase-, DNA gyrase B-, p; E=7.3e-38; histidine kinase (PhoR1) complement(3963019..3964356) Rhodopirellula baltica SH 1 1790403 NP_867800.1 CDS RB7411 NC_005027.1 3964353 3964529 R hypothetical protein complement(3964353..3964529) Rhodopirellula baltica SH 1 1796468 NP_867801.1 CDS RB7412 NC_005027.1 3964518 3964904 D hypothetical protein 3964518..3964904 Rhodopirellula baltica SH 1 1790961 NP_867802.1 CDS RB7414 NC_005027.1 3964937 3965263 R hypothetical protein complement(3964937..3965263) Rhodopirellula baltica SH 1 1797216 NP_867803.1 CDS RB7415 NC_005027.1 3965167 3969372 D hypothetical protein 3965167..3969372 Rhodopirellula baltica SH 1 1792284 NP_867804.1 CDS RB7418 NC_005027.1 3969369 3979892 D best DB hits: PFAM: PF01433; Peptidase M1; E=0.23 PF01542; Hepatitis C virus core protei; E=0.54 PF00034; Cytochrome c; E=0.002; hypothetical protein 3969369..3979892 Rhodopirellula baltica SH 1 1796201 NP_867805.1 CDS nifS NC_005027.1 3979889 3981148 D PMID: 99411980 best DB hits: BLAST: pir:G69051; nifS protein - Methanobacterium thermoautotrophicum; E=8e-37 ddbj:BAB07775.1; (AP001520) aminotransferase required for NAD; E=1e-34 pir:F70019; nifS protein homolog yurW - Bacillus subtilis -----; E=4e-27 COG: MTH1389; COG0520 Selenocysteine lyase; E=8e-38 aq_739; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; E=1e-20 BH3469; COG0520 Selenocysteine lyase; E=5e-20 PFAM: PF00266; Aminotransferase class-V; E=1.4e-19; aminotransferase NifS- NifS-like protein 3979889..3981148 Rhodopirellula baltica SH 1 1794098 NP_867806.1 CDS nadA NC_005027.1 3981262 3982491 D 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 3981262..3982491 Rhodopirellula baltica SH 1 1791472 NP_867807.1 CDS RB7428 NC_005027.1 3982578 3982964 D PMID: 7542800 best DB hits: BLAST: swissprot:P45019; YGDD_HAEIN HYPOTHETICAL PROTEIN HI1073 -----; E=6e-10 pir:C83599; conserved hypothetical protein PA0379 [imported] -; E=2e-09 embl:CAB63338.1; (AL032631) Y106G6H.8 [Caenorhabditis elegans]; E=3e-09 COG: HI1073; COG2363 Uncharacterized small membrane protein; E=6e-11; hypothetical protein 3982578..3982964 Rhodopirellula baltica SH 1 1790429 NP_867808.1 CDS pyrB NC_005027.1 3982983 3984014 D PMID: 97000351 best DB hits: BLAST: embl:CAB93367.1; (AL357523) aspartate carbamoyltransferase; E=4e-67 swissprot:P74163; PYRB_SYNY3 ASPARTATE CARBAMOYLTRANSFERASE; E=6e-64 swissprot:Q59711; PYRB_PSEPU ASPARTATE CARBAMOYLTRANSFERASE; E=5e-63 COG: slr1476; COG0540 Aspartate carbamoyltransferase, catalytic chain; E=6e-65 PFAM: PF02729; Aspartate/ornithine carbamoylt; E=1.1e-44 PF01229; Glycosyl hydrolases family 39; E=0.23 PF00185; Aspartate/ornithine carbamoylt; E=7.1e-18; aspartate carbamoyltransferase 3982983..3984014 Rhodopirellula baltica SH 1 1794870 NP_867809.1 CDS pyrC NC_005027.1 3983957 3985327 D PMID: 97000351 PMID: 7516791 best DB hits: BLAST: embl:CAB93366.1; (AL357523) dihydroorotase [Streptomyces; E=2e-61 swissprot:P71809; PYRC_MYCTU DIHYDROOROTASE (DHOASE) -----; E=2e-54 swissprot:Q59712; PYRX_PSEPU DIHYDROOROTASE-LIKE PROTEIN; E=5e-54 COG: Rv1381; COG0044 Dihydroorotase; E=2e-55 PFAM: PF00744; Dihydroorotase-like; E=5.8e-12 PF02612; N-acetylglucosamine-6-phosphat; E=0.25 PF00744; Dihydroorotase-like; E=1.5e-33; dihydroorotase 3983957..3985327 Rhodopirellula baltica SH 1 1792269 NP_867810.1 CDS rnpA NC_005027.1 3985327 3985767 D PMID: 9628904 PMID: 99356711 PMID: 10427704 PMID: 20512582 PMID: 11058132 best DB hits: BLAST: swissprot:Q9RCA4; RNPA_BACHD RIBONUCLEASE P PROTEIN COMPONENT; E=3e-07 swissprot:Q9Z6X2; RNPA_CHLPN RIBONUCLEASE P PROTEIN COMPONENT; E=3e-06 pir:JQ1214; ribonuclease P (EC 3.1.26.5) protein component rnpA -; E=5e-06 COG: BH4065; COG0594 RNase P protein component; E=3e-08 PFAM: PF00825; Ribonuclease P; E=2.6e-21; ribonuclease P protein component 3985327..3985767 Rhodopirellula baltica SH 1 1792417 NP_867811.1 CDS RB7433 NC_005027.1 3985750 3986793 R best DB hits: BLAST: pir:F82509; conserved hypothetical protein VCA0040 [imported] -; E=6e-37 pir:H69160; hypothetical protein MTH465 - Methanobacterium; E=5e-26 gb:AAG19472.1; (AE005039) Vng1069c [Halobacterium sp. NRC-1]; E=2e-19 COG: VCA0040; COG2035 Predicted membrane protein; E=6e-38; hypothetical protein complement(3985750..3986793) Rhodopirellula baltica SH 1 1792272 NP_867812.1 CDS RB7434 NC_005027.1 3986759 3986899 D hypothetical protein 3986759..3986899 Rhodopirellula baltica SH 1 1794626 NP_867813.1 CDS bacA NC_005027.1 3986915 3987688 D PMID: 8389741 best DB hits: BLAST: gb:AAG03365.1; (AF024666) BacA [Corynebacterium striatum]; E=2e-26 gb:AAG58191.1; AE005535_3 (AE005535) bacitracin resistance; E=7e-26 swissprot:P31054; BACA_ECOLI BACITRACIN RESISTANCE PROTEIN; E=8e-26 COG: bacA; COG1968 Uncharacterized ACR, bacitracin resistance protein; E=7e-27 MTH1429; COG1968 Uncharacterized ACR, bacitracin resistance; E=2e-06 PFAM: PF02673; Bacitracin resistance protein BacA; E=0.005; bacitracin resistance protein (BacA) 3986915..3987688 Rhodopirellula baltica SH 1 1791742 NP_867814.1 CDS lexA NC_005027.1 3987953 3988672 D PMID: 1657879 PMID: 8969214 PMID: 9555905 best DB hits: BLAST: embl:CAA12169.1; (AJ224870) LexA protein [Streptomyces; E=2e-17 swissprot:P31080; LEXA_BACSU LEXA REPRESSOR (SOS REGULATORY; E=8e-17 pir:T35123; SOS response regulator lexA - Streptomyces coelicolor; E=1e-16 COG: BS_lexA; COG1974 SOS-response transcriptional repressors; E=8e-18 lexA; COG1974 SOS-response transcriptional repressors (RecA-mediated; E=2e-14 VC0092; COG1974 SOS-response transcriptional repressors; E=3e-13 PFAM: PF01726; LexA DNA binding domain; E=5.5e-33 PF00717; Peptidase S24; E=0.0016; LexA protein 3987953..3988672 Rhodopirellula baltica SH 1 1793041 NP_867815.1 CDS RB7439 NC_005027.1 3988692 3990002 R best DB hits: PFAM: PF00461; Signal peptidase I; E=0.0034; signal peptidase complement(3988692..3990002) Rhodopirellula baltica SH 1 1791913 NP_867816.1 CDS RB7440 NC_005027.1 3990113 3990535 D best DB hits: BLAST: gb:AAF18102.1; AF204400_2 (AF204400) FrgB [Myxococcus xanthus]; E=0.13 ddbj:BAB07745.1; (AP001520) two-component sensor histidine kinase; E=0.83 PFAM: PF02518; Histidine kinase-, DNA gyrase B; E=0.00025; two-component sensor histidine kinase 3990113..3990535 Rhodopirellula baltica SH 1 1791960 NP_867817.1 CDS flgB NC_005027.1 3990532 3991098 D PMID: 20437337 PMID: 1905667 best DB hits: BLAST: pir:C83510; flagellar basal-body rod protein FlgB PA1077; E=0.002 gb:AAD19729.1; (AF124349) flagellar basal-body rod protein; E=0.020 gb:AAF14367.1; AF133240_1 (AF133240) flagellar proximal rod; E=0.034 COG: PA1077; COG1815 Flagellar basal body protein; E=1e-04; flagellar basal-body rod protein FlgB 3990532..3991098 Rhodopirellula baltica SH 1 1790633 NP_867818.1 CDS flgC NC_005027.1 3991134 3991565 D PMID: 2129540 PMID: 2404955 PMID: 11677608 best DB hits: BLAST: swissprot:Q57466; FLGC_BORBU FLAGELLAR BASAL-BODY ROD PROTEIN FLGC; E=2e-18 gb:AAC45656.1; (U82214) FlgC [Proteus mirabilis]; E=4e-18 swissprot:P16438; FLGC_SALTY FLAGELLAR BASAL-BODY ROD PROTEIN FLGC; E=1e-17 COG: BB0293; COG1558 Flagellar basal body rod protein; E=2e-19 PFAM: PF00460; Flagella basal body rod protein; E=0.001; flagellar basal body rod protein FlgC 3991134..3991565 Rhodopirellula baltica SH 1 1795014 NP_867819.1 CDS fliE NC_005027.1 3991601 3992020 D PMID: 1905667 best DB hits: BLAST: pir:G72263; flagellar hook-basal body complex protein FliE -; E=7e-05 swissprot:O67242; FLIE_AQUAE FLAGELLAR HOOK-BASAL BODY COMPLEX; E=1e-04 pir:E64714; flagellar hook-basal body complex protein - Helicobacter; E=0.002 COG: TM1366; COG1677 Flagellar hook-basal body protein; E=7e-06 PFAM: PF02049; Flagellar hook-basal body complex pr; E=1.9e-12; flagellar hook-basal body complex protein FliE 3991601..3992020 Rhodopirellula baltica SH 1 1790479 NP_867820.1 CDS fliF NC_005027.1 3992031 3993668 D PMID: 20115548 PMID: 10648530 best DB hits: BLAST: gb:AAD15920.1; (AF069392) polar flagellar M-ring protein FliF; E=6e-04 swissprot:Q53151; FLIF_RHOSH FLAGELLAR M-RING PROTEIN -----; E=0.001 swissprot:O67241; FLIF_AQUAE FLAGELLAR M-RING PROTEIN -----; E=0.002 COG: aq_1182; COG1766 Flagellar biosynthesis/type III secretory pathway; E=2e-04 PFAM: PF01514; Secretory protein of YscJ/FliF fa; E=0.00027; polar flagellar M-ring protein FliF 3992031..3993668 Rhodopirellula baltica SH 1 1796859 NP_867821.1 CDS RB7446 NC_005027.1 3993693 3994460 R signal peptide complement(3993693..3994460) Rhodopirellula baltica SH 1 1797195 NP_867822.1 CDS RB7447 NC_005027.1 3993813 3994457 D signal peptide 3993813..3994457 Rhodopirellula baltica SH 1 1790257 NP_867823.1 CDS RB7451 NC_005027.1 3994530 3994706 D hypothetical protein 3994530..3994706 Rhodopirellula baltica SH 1 1794452 NP_867824.1 CDS RB7452 NC_005027.1 3994713 3995225 D PMID: 98282232 best DB hits: BLAST: gb:AAF23370.1; (AF178219) MMSET type II [Homo sapiens]; E=5e-12 ddbj:BAA83042.1; (AB029013) KIAA1090 protein [Homo sapiens]; E=5e-12 gb:AAK00344.1; AF330040_1 (AF330040) IL-5 promoter; E=5e-12 COG: YHR119w; COG2940 Proteins containing SET domain; E=3e-06 PFAM: PF00856; SET domain; E=5.6e-16; hypothetical protein 3994713..3995225 Rhodopirellula baltica SH 1 1790816 NP_867825.1 CDS nifS NC_005027.1 3995366 3996511 D PMID: 10930739 PMID: 2553733 best DB hits: BLAST: gb:AAG01802.1; AF276772_1 (AF276772) cysteine desulfurase NifS; E=4e-53 swissprot:P12623; NIFS_ANASP NIFS PROTEIN ----- pir: C34443; E=2e-50 swissprot:Q43884; NIFS_ANAAZ NIFS PROTEIN ----- gb: AAA87249.1; E=3e-50 COG: yfhO; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; E=3e-51 PFAM: PF00266; Aminotransferase class-V; E=7.9e-47; cysteine desulfurase 3995366..3996511 Rhodopirellula baltica SH 1 1792351 NP_867826.1 CDS RB7454 NC_005027.1 3996496 3996714 R hypothetical protein complement(3996496..3996714) Rhodopirellula baltica SH 1 1791791 NP_867827.1 CDS RB7455 NC_005027.1 3996761 3999277 R PMID: 20196006 best DB hits: BLAST: gb:AAF57876.1; (AE003803) CG6564 gene product [Drosophila; E=0.010 embl:CAA96576.1; (Z72495) ZP2 [Carassius auratus]; E=0.47; hypothetical protein complement(3996761..3999277) Rhodopirellula baltica SH 1 1796380 NP_867828.1 CDS RB7460 NC_005027.1 3999258 3999599 R hypothetical protein complement(3999258..3999599) Rhodopirellula baltica SH 1 1792420 NP_867829.1 CDS RB7461 NC_005027.1 3999634 4001478 D best DB hits: BLAST: gb:AAA98756.1; (L29642) sensor kinase [Pseudomonas fluorescens]; E=2e-07 pir:S42745; nitrogen assimilation regulatory protein ntrC -; E=8e-07 swissprot:P45671; NTRC_AZOBR NITROGEN ASSIMILATION REGULATORY; E=4e-06 COG: VCA0142; COG2204 AAA superfamily ATPases with N-terminal receiver; E=7e-07 BB0570; COG0784 CheY-like receiver domains; E=6e-06 Rv0981; COG0745 Response regulators consisting of a CheY-like; E=9e-06 PFAM: PF01590; GAF domain; E=6.1e-16 PF00072; Response regulator receiver doma; E=7.9e-12; sensor kinase 3999634..4001478 Rhodopirellula baltica SH 1 1793365 NP_867830.1 CDS RB7464 NC_005027.1 4001480 4001614 R hypothetical protein complement(4001480..4001614) Rhodopirellula baltica SH 1 1796229 NP_867831.1 CDS sir NC_005027.1 4001633 4003504 R hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide; sulfite reductase subunit beta complement(4001633..4003504) Rhodopirellula baltica SH 1 1791725 NP_867832.1 CDS folD NC_005027.1 4003464 4004447 D PMID: 8485162 best DB hits: BLAST: ddbj:BAB06503.1; (AP001516) methylenetetrahydrofolate; E=8e-74 swissprot:P54382; FOLD_BACSU FOLD BIFUNCTIONAL PROTEIN [INCLUDES:; E=2e-70 gb:AAF07929.1; AF186073_2 (AF186073) NMDMC isoform A [Drosophila; E=3e-70 COG: BH2784; COG0190 5,10-methylene-tetrahydrofolate dehydrogenase; E=8e-75 PFAM: PF00763; Tetrahydrofolate dehydrogenase/; E=4.3e-68 PF01262; Alanine dehydrogenase/pyridine; E=0.71 PF02882; Tetrahydrofolate dehydrogenase/; E=1.1e-101; 5,20-methylene-tetrahyrdofolate dehydrogenase (NADP+) / methylentetrahydrofolate cyclohydrolase 4003464..4004447 Rhodopirellula baltica SH 1 1796167 NP_867833.1 CDS RB7469 NC_005027.1 4004558 4006096 R PMID: 91151356 PMID: 91151356 PMID: 92235856 best DB hits: BLAST: pir:S21801; myosin heavy chain, neuronal [similarity] - rat; E=0.047 gb:AAD01409.1; (AF007557) Mrp22 [Streptococcus pyogenes]; E=0.082 pir:S57834; fcrA protein precursor - Streptococcus pyogenes -----; E=0.15; hypothetical protein complement(4004558..4006096) Rhodopirellula baltica SH 1 1797161 NP_867834.1 CDS RB7471 NC_005027.1 4006083 4006361 R hypothetical protein complement(4006083..4006361) Rhodopirellula baltica SH 1 1791274 NP_867835.1 CDS RB7472 NC_005027.1 4006340 4009093 D hypothetical protein 4006340..4009093 Rhodopirellula baltica SH 1 1792633 NP_867836.1 CDS rpfC NC_005027.1 4009223 4011820 R best DB hits: BLAST: pir:S75525; sensory transduction histidine kinase sll1228 -; E=3e-62 pir:S75136; sensory transduction histidine kinase slr2104 -; E=5e-60 pir:H82211; sensory box sensor histidine kinaseresponse regulator; E=1e-58 COG: VC1349_2; COG0642 Sensory transduction histidine kinases; E=9e-60 PFAM: PF00989; PAS domain; E=0.025 PF00785; PAC motif; E=0.012 PF00989; PAS domain; E=7.5e-05; sensory transduction histidine kinase complement(4009223..4011820) Rhodopirellula baltica SH 1 1796660 NP_867837.1 CDS RB7475 NC_005027.1 4011889 4012086 D hypothetical protein 4011889..4012086 Rhodopirellula baltica SH 1 1796402 NP_867838.1 CDS RB7476 NC_005027.1 4012092 4013264 R signal peptide complement(4012092..4013264) Rhodopirellula baltica SH 1 1791210 NP_867839.1 CDS RB7479 NC_005027.1 4013334 4013702 D hypothetical protein 4013334..4013702 Rhodopirellula baltica SH 1 1793380 NP_867840.1 CDS arsA NC_005027.1 4013745 4015334 D PMID: 7910580 PMID: 1572648 best DB hits: BLAST: embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=2e-44 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=2e-44 pdb:1E2S; P Chain P, Crystal Structure Of An Arylsulfatase A; E=2e-43 COG: aslA; COG3119 Arylsulfatase A and related enzymes; E=2e-27 PFAM: PF00884; Sulfatase; E=1.7e-47 PF01920; KE2 family protein; E=0.32; arylsulphatase A 4013745..4015334 Rhodopirellula baltica SH 1 1791672 NP_867841.1 CDS rfbE NC_005027.1 4015443 4016498 R PMID: 96125720 PMID: 97158136 PMID: 2793833 best DB hits: BLAST: gb:AAB48319.1; (U29691) CDP-tyvelose epimerase [Yersinia; E=2e-29 swissprot:P14169; RFBE_SALTI CDP-TYVELOSE-2-EPIMERASE -----; E=3e-27 pir:B33604; rfbE protein - Salmonella sp; E=7e-26 COG: HI0873; COG1088 dTDP-D-glucose 4,6-dehydratase; E=5e-19 BH3649; COG0451 Nucleoside-diphosphate-sugar epimerases; E=1e-14 PH0414; COG1088 dTDP-D-glucose 4,6-dehydratase; E=1e-14 PFAM: PF01370; NAD dependent epimerase/dehydratase; E=0.0012; CDP-tyvelose epimerase complement(4015443..4016498) Rhodopirellula baltica SH 1 1796006 NP_867842.1 CDS RB7484 NC_005027.1 4016511 4016675 R hypothetical protein complement(4016511..4016675) Rhodopirellula baltica SH 1 1794933 NP_867843.1 CDS RB7486 NC_005027.1 4016672 4017064 R hypothetical protein complement(4016672..4017064) Rhodopirellula baltica SH 1 1795768 NP_867844.1 CDS hydH NC_005027.1 4017110 4017949 D PMID: 2666400 best DB hits: BLAST: swissprot:P14377; HYDH_ECOLI SENSOR PROTEIN HYDH ----- pir:; E=5e-19 gb:AAG59200.1; AE005632_1 (AE005632) sensor kinase for HydG,; E=6e-18 swissprot:P07168; VIRA_AGRT6 WIDE HOST RANGE VIRA PROTEIN (WHR; E=6e-18 COG: hydH; COG0642 Sensory transduction histidine kinases; E=5e-20 PFAM: PF00512; His Kinase A (phosphoacceptor) doma; E=1.1e-06 PF02518; Histidine kinase-, DNA gyrase B-, p; E=4e-35; sensor protein HYDH 4017110..4017949 Rhodopirellula baltica SH 1 1794096 NP_867845.1 CDS RB7491 NC_005027.1 4018102 4018983 D PMID: 99402746 PMID: 10473412 best DB hits: BLAST: ddbj:BAA20094.1; (D78338) L-proline 4-hydroxylase; E=1e-10 gb:AAF54534.2; (AE003688) CG14688 gene product [Drosophila; E=3e-07 ddbj:BAA75924.1; (D73371) epoxidase subunit A [Penicillium; E=3e-06; L-proline 4-hydroxylase 4018102..4018983 Rhodopirellula baltica SH 1 1793494 NP_867846.1 CDS RB7494 NC_005027.1 4019046 4020083 D best DB hits: BLAST: pir:B75025; NADH-dependent dyhydrogenase related protein PAB1139 -; E=2e-11 pir:E71201; probable glucose-fructose oxidoreductase - Pyrococcus; E=8e-10 gb:AAC01706.1; (AF040570) unknown [Amycolatopsis mediterranei]; E=2e-09 COG: PAB1139; COG0673 Predicted dehydrogenases and related proteins; E=2e-12 PFAM: PF01408; Oxidoreductase, NAD-bin; E=3.2e-10 PF02894; Oxidoreductase, C-termi; E=3.4e-05; NADH-dependent dyhydrogenase related protein 4019046..4020083 Rhodopirellula baltica SH 1 1794939 NP_867847.1 CDS RB7495 NC_005027.1 4020151 4029972 R PMID: 11932238 best DB hits: BLAST: gb:AAD38597.1; AF145622_1 (AF145622) BcDNA.GH04245 [Drosophila; E=6e-08 gb:AAG22339.1; (AE003787) Ogt gene product [alt 3] [Drosophila; E=6e-08 swissprot:P56558; OGT1_RAT UDP-N-ACETYLGLUCOSAMINE--PEPTIDE; E=9e-08 COG: MTH72; COG0457 TPR-repeat-containing proteins; E=9e-07 PFAM: PF00515; TPR Domain; E=0.017 PF00671; Iron/Ascorbate oxidoreductase; E=0.67 PF00515; TPR Domain; E=0.21; hypothetical protein complement(4020151..4029972) Rhodopirellula baltica SH 1 1795764 NP_867848.1 CDS moxR NC_005027.1 4030069 4031112 D PMID: 98065943 PMID: 9403685 PMID: 8997703 best DB hits: BLAST: pir:H70121; methanol dehydrogenase regulator (moxR) homolog - Lyme; E=2e-65 embl:CAA65298.1; (X96434) moxR [Borrelia burgdorferi] -----; E=3e-63 pir:C83106; conserved hypothetical protein PA4322 [imported] -; E=1e-61 COG: BB0176; COG0714 MoxR-like ATPases; E=2e-66 PFAM: PF00004; ATPase associated with; E=1.1e-05 PF02223; Thymidylate kinase; E=0.47 PF01078; Magnesium chelatase, subunit; E=3.9e-08; methanol dehydrogenase regulator (moxR)-like protein 4030069..4031112 Rhodopirellula baltica SH 1 1795421 NP_867849.1 CDS RB7501 NC_005027.1 4031109 4032011 D PMID: 97061201 best DB hits: BLAST: pir:S75346; hypothetical protein slr2013 - Synechocystis sp. (strain; E=3e-11 pir:D83106; hypothetical protein PA4323 [imported] - Pseudomonas; E=1e-10 embl:CAB90930.1; (AL355774) lipoprotein [Streptomyces; E=1e-09 COG: slr2013; COG1721 Uncharacterized ACR; E=3e-12 PFAM: PF01882; Protein of unknown function DUF58; E=2.5e-18; hypothetical protein 4031109..4032011 Rhodopirellula baltica SH 1 1794246 NP_867850.1 CDS RB7502 NC_005027.1 4032015 4033937 D PMID: 11932238; hypothetical protein 4032015..4033937 Rhodopirellula baltica SH 1 1791489 NP_867851.1 CDS RB7503 NC_005027.1 4033904 4036606 D PMID: 11932238 PMID: 96127529 PMID: 8590279 best DB hits: BLAST: swissprot:Q55874; Y103_SYNY3 HYPOTHETICAL 45.8 KD PROTEIN SLL0103; E=5e-12 gb:AAF13350.1; AF121336_1 (AF121336) unknown [Eufolliculina; E=4e-11 embl:CAB75310.1; (AL139164) lipoprotein [Streptomyces; E=1e-10 COG: sll0103; COG2304 Protein containing von Willebrand factor (vWF) type; E=5e-13 yfbK; COG2304 Protein containing von Willebrand factor (vWF) type A; E=2e-09 DRA0331; COG2304 Protein containing von Willebrand factor (vWF) type; E=0.003 PFAM: PF00092; von Willebrand factor type A domain; E=0.024; chloride channel 4033904..4036606 Rhodopirellula baltica SH 1 1790733 NP_867852.1 CDS RB7507 NC_005027.1 4036748 4038313 D PMID: 93211444; hypothetical protein 4036748..4038313 Rhodopirellula baltica SH 1 1791500 NP_867853.1 CDS RB7509 NC_005027.1 4038376 4039899 R signal peptide complement(4038376..4039899) Rhodopirellula baltica SH 1 1794175 NP_867854.1 CDS RB7510 NC_005027.1 4039899 4041125 R PMID: 94281248 PMID: 8011666 PMID: 97419514 PMID: 9274029 best DB hits: BLAST: swissprot:P40407; YBBC_BACSU HYPOTHETICAL 46.0 KDA PROTEIN IN; E=6e-75 ddbj:BAB04393.1; (AP001509) BH0674~unknown conserved protein; E=3e-71 pir:G81651; conserved hypothetical protein TC0894 [imported] -; E=5e-47; hypothetical protein complement(4039899..4041125) Rhodopirellula baltica SH 1 1796316 NP_867855.1 CDS RB7512 NC_005027.1 4041167 4042690 R PMID: 97000351 PMID: 8559252 best DB hits: BLAST: embl:CAC16517.1; (AL450223) integral membrane transport; E=3e-41 pir:A82432; sodiumsolute symporter VCA0667 [imported] - Vibrio; E=4e-26 pir:S75887; hypothetical protein - Synechocystis sp. (strain PCC; E=2e-25 COG: VCA0667; COG0591 Na+/proline, Na+/panthothenate symporters and; E=4e-27 yidK; COG0591 Na+/proline, Na+/panthothenate symporters and related; E=2e-06 PA0287; COG0591 Na+/proline, Na+/panthothenate symporters and; E=2e-06 PFAM: PF00474; Sodium:solute symporter family; E=1.6e-20; integral membrane transport protein complement(4041167..4042690) Rhodopirellula baltica SH 1 1791196 NP_867856.1 CDS murQ NC_005027.1 4042826 4043734 D catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid-6-phosphate etherase 4042826..4043734 Rhodopirellula baltica SH 1 1792933 NP_867857.1 CDS RB7515 NC_005027.1 4043608 4044696 D best DB hits: BLAST: gb:AAF19757.1; AC009917_16 (AC009917) F26G16.16 [Arabidopsis; E=7e-24 embl:CAB71200.1; (AL138538) kinase [Streptomyces; E=6e-20 gb:AAF55174.1; (AE003708) CG6218 gene product [Drosophila; E=8e-12 COG: Ta0122; COG2971 Uncharacterized BCR; E=2e-06; N-acetylglucosamine kinase 4043608..4044696 Rhodopirellula baltica SH 1 1794021 NP_867858.1 CDS RB7517 NC_005027.1 4044716 4045426 R hypothetical protein complement(4044716..4045426) Rhodopirellula baltica SH 1 1792401 NP_867859.1 CDS RB7518 NC_005027.1 4045551 4045736 R hypothetical protein complement(4045551..4045736) Rhodopirellula baltica SH 1 1791630 NP_867860.1 CDS RB7521 NC_005027.1 4045790 4047814 D best DB hits: PFAM: PF01841; Transglutaminase-like superfam; E=0.039; signal peptide 4045790..4047814 Rhodopirellula baltica SH 1 1795139 NP_867861.1 CDS RB7522 NC_005027.1 4047815 4047928 D hypothetical protein 4047815..4047928 Rhodopirellula baltica SH 1 1790106 NP_867862.1 CDS RB7523 NC_005027.1 4047925 4048074 D hypothetical protein 4047925..4048074 Rhodopirellula baltica SH 1 1790925 NP_867863.1 CDS RB7525 NC_005027.1 4048085 4048930 R PMID: 2250030; signal peptide complement(4048085..4048930) Rhodopirellula baltica SH 1 1793418 NP_867864.1 CDS RB7530 NC_005027.1 4049005 4049298 R hypothetical protein complement(4049005..4049298) Rhodopirellula baltica SH 1 1796213 NP_867865.1 CDS RB7531 NC_005027.1 4049347 4049706 R hypothetical protein complement(4049347..4049706) Rhodopirellula baltica SH 1 1795166 NP_867866.1 CDS RB7532 NC_005027.1 4049364 4049582 D hypothetical protein 4049364..4049582 Rhodopirellula baltica SH 1 1792798 NP_867867.1 CDS RB7533 NC_005027.1 4049600 4049971 D PMID: 11930014; hypothetical protein 4049600..4049971 Rhodopirellula baltica SH 1 1794690 NP_867868.1 CDS RB7535 NC_005027.1 4050024 4050434 D hypothetical protein 4050024..4050434 Rhodopirellula baltica SH 1 1791716 NP_867869.1 CDS RB7538 NC_005027.1 4050553 4052556 D PMID: 20406833 best DB hits: BLAST: pir:A82284; conserved hypothetical protein VC0762 [imported] -; E=0.029 pir:T29127; hypothetical protein SC1F2.18 - Streptomyces coelicolor; E=0.18 pir:H69064; serinethreonine protein kinase related protein -; E=0.49 COG: VC0762; COG1520 Uncharacterized proteins of WD40-like repeat family; E=0.003 PFAM: PF01011; PQQ enzyme repeat; E=0.054; hypothetical protein 4050553..4052556 Rhodopirellula baltica SH 1 1793623 NP_867870.1 CDS RB7540 NC_005027.1 4052562 4052732 D hypothetical protein 4052562..4052732 Rhodopirellula baltica SH 1 1790103 NP_867871.1 CDS RB7541 NC_005027.1 4052699 4054777 D PMID: 98037514 best DB hits: BLAST: pir:H69064; serinethreonine protein kinase related protein -; E=0.16; serine/threonine protein kinase related protein 4052699..4054777 Rhodopirellula baltica SH 1 1795250 NP_867872.1 CDS RB7542 NC_005027.1 4054857 4054997 D hypothetical protein 4054857..4054997 Rhodopirellula baltica SH 1 1796724 NP_867873.1 CDS RB7544 NC_005027.1 4054985 4055206 R hypothetical protein complement(4054985..4055206) Rhodopirellula baltica SH 1 1796745 NP_867874.1 CDS RB7545 NC_005027.1 4055149 4055379 D hypothetical protein 4055149..4055379 Rhodopirellula baltica SH 1 1795794 NP_867875.1 CDS metF NC_005027.1 4055403 4056287 R PMID: 99215588 PMID: 6356036 best DB hits: BLAST: swissprot:O67422; METF_AQUAE 5,10-METHYLENETETRAHYDROFOLATE; E=1e-57 pir:T47821; methylenetetrahydrofolate reductase MTHFR1 - Arabidopsis; E=6e-50 gb:AAD51733.1; AF174486_1 (AF174486) methylenetetrahydrofolate; E=6e-48 COG: aq_1429; COG0685 5,10-methylenetetrahydrofolate reductase; E=1e-58 PFAM: PF02219; Methylenetetrahydrofolate reductase; E=2.9e-97; 5,10-methylenetetrahydrofolate reductase complement(4055403..4056287) Rhodopirellula baltica SH 1 1792219 NP_867876.1 CDS RB7547 NC_005027.1 4056333 4056542 D hypothetical protein 4056333..4056542 Rhodopirellula baltica SH 1 1790806 NP_867877.1 CDS RB7548 NC_005027.1 4056682 4057539 R PMID: 98007868 PMID: 99047670 best DB hits: BLAST: gb:AAF01812.1; AF187532_8 (AF187532) SnoK [Streptomyces nogalater]; E=1e-09 gb:AAD50521.1; (U25130) syringomycin biosynthesis enzyme 2; E=1e-09 gb:AAC71711.1; (AF061267) alpha-ketoglutarate-dependent; E=1e-07; syringomycin biosynthesis enzyme 2 complement(4056682..4057539) Rhodopirellula baltica SH 1 1790142 NP_867878.1 CDS RB7549 NC_005027.1 4057545 4057727 D hypothetical protein 4057545..4057727 Rhodopirellula baltica SH 1 1796051 NP_867879.1 CDS RB7550 NC_005027.1 4057734 4058303 D hypothetical protein 4057734..4058303 Rhodopirellula baltica SH 1 1791161 NP_867880.1 CDS RB7554 NC_005027.1 4058314 4058751 D PMID: 11823852; signal peptide 4058314..4058751 Rhodopirellula baltica SH 1 1793046 NP_867881.1 CDS RB7555 NC_005027.1 4058409 4058948 D hypothetical protein 4058409..4058948 Rhodopirellula baltica SH 1 1790067 NP_867882.1 CDS RB7557 NC_005027.1 4058936 4059919 D best DB hits: BLAST: swissprot:P70960; YWMC_BACSU HYPOTHETICAL 24.5 KDA PROTEIN IN; E=3e-05 embl:CAB75310.1; (AL139164) lipoprotein [Streptomyces; E=4e-05 swissprot:Q55874; Y103_SYNY3 HYPOTHETICAL 45.8 KD PROTEIN SLL0103; E=6e-05 COG: BS_ywmC; COG2304 Protein containing von Willebrand factor (vWF) type; E=3e-06 VCA0172; COG3035 Uncharacterized BCR; E=3e-05 PFAM: PF00092; von Willebrand factor type A domain; E=0.013; hypothetical protein 4058936..4059919 Rhodopirellula baltica SH 1 1792366 NP_867883.1 CDS RB7559 NC_005027.1 4059970 4060392 D transporter 4059970..4060392 Rhodopirellula baltica SH 1 1793867 NP_867884.1 CDS GALNS NC_005027.1 4060394 4061986 R PMID: 1755850 PMID: 8001980 PMID: 1522213 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=1e-31 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=4e-30 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=8e-28 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=3e-26 PFAM: PF00884; Sulfatase; E=7.7e-45; N-acetylgalactosamine 6-sulfate sulfatase (GALNS) complement(4060394..4061986) Rhodopirellula baltica SH 1 1791001 NP_867885.1 CDS RB7562 NC_005027.1 4062057 4062959 R PMID: 97288094 best DB hits: BLAST: pir:B75555; probable lipaseesterase - Deinococcus radiodurans; E=1e-14 pir:B70961; probable esterase - Mycobacterium tuberculosis (strain; E=1e-13 pir:H70731; probable esterase - Mycobacterium tuberculosis (strain; E=2e-08 COG: DR0133; COG0657 Acetyl esterase; E=1e-15 APE2441; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; E=1e-04 Rv1399c; COG0657 Acetyl esterase; E=0.001; lipase/esterase complement(4062057..4062959) Rhodopirellula baltica SH 1 1791469 NP_867886.1 CDS RB7563 NC_005027.1 4062975 4063148 R hypothetical protein complement(4062975..4063148) Rhodopirellula baltica SH 1 1795453 NP_867887.1 CDS cefD NC_005027.1 4063124 4064311 D PMID: 8437592 best DB hits: BLAST: swissprot:Q03046; CEFD_NOCLA ISOPENICILLIN N EPIMERASE -----; E=8e-34 ddbj:BAA96579.1; (AP002480) ESTs AU091298(C61241),C28476(C61241); E=2e-31 swissprot:P18549; CEFD_STRCL ISOPENICILLIN N EPIMERASE -----; E=6e-31 COG: csdB; COG0520 Selenocysteine lyase; E=3e-15 VC0748; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; E=1e-07 XF1473; COG0520 Selenocysteine lyase; E=2e-07 PFAM: PF00266; Aminotransferase class-V; E=1.3e-12; isopenicillin N-epimerase 4063124..4064311 Rhodopirellula baltica SH 1 1793263 NP_867888.1 CDS RB7565 NC_005027.1 4064351 4065637 R PMID: 11743193; hypothetical protein complement(4064351..4065637) Rhodopirellula baltica SH 1 1790699 NP_867889.1 CDS RB7566 NC_005027.1 4065613 4065720 R hypothetical protein complement(4065613..4065720) Rhodopirellula baltica SH 1 1796360 NP_867890.1 CDS RB7567 NC_005027.1 4065664 4065873 D hypothetical protein 4065664..4065873 Rhodopirellula baltica SH 1 1794712 NP_867891.1 CDS RB7568 NC_005027.1 4065680 4065898 R hypothetical protein complement(4065680..4065898) Rhodopirellula baltica SH 1 1792384 NP_867892.1 CDS mutM NC_005027.1 4065806 4066708 D PMID: 96102858 best DB hits: BLAST: swissprot:P55044; FPG_NEIMB FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE; E=2e-29 swissprot:P95744; FPG_SYNEN FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE; E=6e-29 prf:2204218A; formamidopyrimidine-DNA glycosylase [Neisseria; E=7e-28 COG: NMB1295; COG0266 Formamidopyrimidine-DNA glycosylase; E=2e-30 PFAM: PF01149; Formamidopyrimidine-DNA glycos; E=6.4e-14; formamidopyrimidine-DNA glycosylase 4065806..4066708 Rhodopirellula baltica SH 1 1792312 NP_867893.1 CDS pfkA NC_005027.1 4066752 4068164 R PMID: 99287316 best DB hits: BLAST: pir:G72396; 6-phosphofructokinase, pyrophosphate-dependent -; E=1e-36 pir:S54978; 6-phosphofructokinase (EC 2.7.1.11),; E=9e-32 gb:AAA85791.1; (U11733) pyrophosphate-dependent; E=1e-31 COG: TM0289; COG0205 6-phosphofructokinase; E=1e-37 PFAM: PF00365; Phosphofructokinase; E=0.0021; 6-phosphofructokinase complement(4066752..4068164) Rhodopirellula baltica SH 1 1796374 NP_867894.1 CDS RB7574 NC_005027.1 4068298 4069113 R PMID: 11889109 best DB hits: BLAST: pir:F64553; hypothetical protein HP0270 - Helicobacter pylori; E=6e-07 pir:F71953; hypothetical protein jhp0255 - Helicobacter pylori; E=6e-07 swissprot:Q9ZE57; Y090_RICPR HYPOTHETICAL PROTEIN RP090 -----; E=8e-07 COG: jhp0255; COG2121 Uncharacterized BCR; E=6e-08 PFAM: PF01553; Acyltransferase; E=0.068; hypothetical protein complement(4068298..4069113) Rhodopirellula baltica SH 1 1790525 NP_867895.1 CDS RB7577 NC_005027.1 4069269 4070366 R hypothetical protein complement(4069269..4070366) Rhodopirellula baltica SH 1 1795983 NP_867896.1 CDS csrA NC_005027.1 4070466 4071035 D PMID: 11727819 best DB hits: BLAST: gb:AAG40471.1; (AF216382) global regulator [Legionella; E=4e-10 gb:AAK03372.1; (AE006168) CsrA [Pasteurella multocida]; E=8e-09 swissprot:Q9WY93; CSRA_THEMA CARBON STORAGE REGULATOR HOMOLOG; E=6e-08 COG: TM0251; COG1551 Carbon storage regulator (could also regulate; E=6e-09 PFAM: PF02599; Carbon storage regulator; E=2.5e-19; global regulator 4070466..4071035 Rhodopirellula baltica SH 1 1789981 NP_867897.1 CDS atoC NC_005027.1 4071162 4072619 D PMID: 8346225 best DB hits: BLAST: swissprot:Q06065; ATOC_ECOLI ACETOACETATE METABOLISM REGULATORY; E=2e-88 pir:F71315; probable response regulatory protein (atoC) - syphilis; E=6e-87 gb:AAF18103.1; AF204400_3 (AF204400) FrgC [Myxococcus xanthus]; E=5e-82 COG: atoC; COG2204 AAA superfamily ATPases with N-terminal receiver; E=2e-89 PFAM: PF00072; Response regulator receiver doma; E=3.9e-32 PF00005; ABC transporter; E=0.86 PF00004; ATPase associated with va; E=5.1e-06; acetoacetate metabolism regulatory protein ATOC 4071162..4072619 Rhodopirellula baltica SH 1 1790281 NP_867898.1 CDS thiD NC_005027.1 4072588 4073415 D PMID: 10075431 best DB hits: BLAST: pir:E71057; probable thiamin biosynthesis protein - Pyrococcus; E=4e-45 pir:C75087; hydroxymethylpyrimidine phosphate kinase (thid) PAB1646; E=2e-44 pir:F75613; phosphomethylpyrimidine kinase - Deinococcus radiodurans; E=5e-43 COG: PH1155_1; COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine; E=4e-46 thiD; COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; E=3e-42 NMB1616; COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine; E=3e-41 PFAM: PF01031; Dynamin central region; E=0.41 PF00294; pfkB family carbohydrate kinase; E=7.7e-08; thiamin biosynthesis protein 4072588..4073415 Rhodopirellula baltica SH 1 1795978 NP_867899.1 CDS RB7581 NC_005027.1 4073449 4074489 R hypothetical protein complement(4073449..4074489) Rhodopirellula baltica SH 1 1797187 NP_867900.1 CDS lplA NC_005027.1 4074530 4075372 R PMID: 99411980 PMID: 99184645 PMID: 99356711 PMID: 99209008 PMID: 99184646 PMID: 20263314 best DB hits: BLAST: ddbj:BAB06531.1; (AP001516) lipoate protein ligase [Bacillus; E=3e-24 pir:D69959; conserved hypothetical protein yqhM - Bacillus subtilis; E=8e-22 pir:C72462; hypothetical protein APE2342 - Aeropyrum pernix (strain; E=8e-17 COG: BH2812; COG0095 Lipoate-protein ligase A; E=3e-25 PFAM: PF02539; Lipoate-protein ligase A; E=1.4e-11; lipoate protein ligase complement(4074530..4075372) Rhodopirellula baltica SH 1 1797171 NP_867901.1 CDS yqhK NC_005027.1 4075369 4076871 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 complement(4075369..4076871) Rhodopirellula baltica SH 1 1795707 NP_867902.1 CDS yqhJ NC_005027.1 4076905 4078350 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 complement(4076905..4078350) Rhodopirellula baltica SH 1 1792846 NP_867903.1 CDS gcvH NC_005027.1 4078313 4078711 R PMID: 1802033 PMID: 8375392 PMID: 8219277 best DB hits: BLAST: swissprot:Q9WY55; GCSH_THEMA PROBABLE GLYCINE CLEAVAGE SYSTEM H; E=6e-15 swissprot:P23884; GCSH_ECOLI GLYCINE CLEAVAGE SYSTEM H PROTEIN; E=3e-14 gb:AAC61829.1; (AC004667) glycine decarboxylase complex H-protein; E=3e-14 COG: TM0212; COG0509 Glycine cleavage system H protein (lipoate-binding); E=6e-16 VNG1605G; COG0509 Glycine cleavage system H protein; E=4e-14 VCA0277; COG0509 Glycine cleavage system H protein (lipoate-binding); E=8e-14 PFAM: PF01597; Glycine cleavage H-protein; E=9.4e-39; glycine cleavage system H protein complement(4078313..4078711) Rhodopirellula baltica SH 1 1792961 NP_867904.1 CDS gcvT NC_005027.1 4078815 4079981 R PMID: 8165246 best DB hits: BLAST: swissprot:O86567; GCST_STRCO PROBABLE AMINOMETHYLTRANSFERASE; E=6e-67 swissprot:P54378; GCST_BACSU PROBABLE AMINOMETHYLTRANSFERASE; E=1e-61 swissprot:Q9K934; GCST_BACHD PROBABLE AMINOMETHYLTRANSFERASE; E=2e-59 COG: BS_yqhI; COG0404 Glycine cleavage system T protein; E=1e-62 PFAM: PF01571; Glycine cleavage T-protein (aminomet; E=7.5e-102; aminotransferase-glycine cleavage system T protein complement(4078815..4079981) Rhodopirellula baltica SH 1 1797157 NP_867905.1 CDS RB7589 NC_005027.1 4079978 4080238 R hypothetical protein complement(4079978..4080238) Rhodopirellula baltica SH 1 1792701 NP_867906.1 CDS RB7590 NC_005027.1 4080204 4083185 R PMID: 96178988 best DB hits: BLAST: pir:D75377; probable proteinase - Deinococcus radiodurans (strain; E=1e-172 gb:AAC98910.1; (AF028721) protease [Rhodothermus sp. 'ITI 518']; E=5e-37 pir:C82309; probable insulinase-type proteinase VC0554 [imported] -; E=2e-36 COG: DR1598; COG0612 Predicted Zn-dependent peptidases; E=1e-173 PFAM: PF00675; Insulinase (Peptidase M; E=3e-15; proteinase complement(4080204..4083185) Rhodopirellula baltica SH 1 1796553 NP_867907.1 CDS RB7592 NC_005027.1 4083050 4083712 D best DB hits: BLAST: embl:CAA09913.1; (AJ012090) ferredoxin [Xanthobacter sp. Py2]; E=7e-06 pir:B83424; assimilatory nitrite reductase small subunit PA1780; E=8e-06 gb:AAD46364.1; AF161183_4 (AF161183) PrnD [Burkholderia cepacia]; E=3e-04 COG: PA1780; COG2146 Ferredoxin subunits of nitrite reductase and; E=8e-07 PFAM: PF00355; Rieske [2Fe-2S] domain; E=1.7e-15; ferredoxin 4083050..4083712 Rhodopirellula baltica SH 1 1795197 NP_867908.1 CDS RB7594 NC_005027.1 4083655 4083975 R hypothetical protein complement(4083655..4083975) Rhodopirellula baltica SH 1 1796744 NP_867909.1 CDS RB7596 NC_005027.1 4084008 4084535 D hypothetical protein 4084008..4084535 Rhodopirellula baltica SH 1 1791197 NP_867910.1 CDS marR NC_005027.1 4084525 4084977 D best DB hits: BLAST: pir:C82396; transcriptional regulator MarR family VCA0955 [imported] -; E=3e-04 embl:CAB95985.1; (AL360034) MarR-family regulatory; E=4e-04 gb:AAD05186.1; (AF110185) unknown [Burkholderia pseudomallei]; E=8e-04 COG: VCA0955; COG1846 Transcriptional regulators; E=3e-05 PFAM: PF01047; MarR family; E=5.2e-13; MarR family transcriptional regulator 4084525..4084977 Rhodopirellula baltica SH 1 1791434 NP_867911.1 CDS RB7598 NC_005027.1 4084913 4086382 D PMID: 92267380 best DB hits: BLAST: pir:JC1118; alkyl sulfatase (EC 3.1.6.-) - Pseudomonas sp -----; E=2e-61 pir:G83552; probable beta-lactamase PA0740 [imported] - Pseudomonas; E=3e-48 embl:CAA99186.1; (Z74906) ORF YOL164w [Saccharomyces cerevisiae]; E=4e-43 COG: PA0740; COG2015 Alkyl sulfatase and related hydrolases; E=2e-49 aq_1798; COG0491 Zn-dependent hydrolases, including glyoxylases; E=2e-07 PFAM: PF00753; Metallo-beta-lactamase superfamil; E=5.2e-32 PF02151; UvrB/uvrC motif; E=0.24; alkyl sulfatase or beta-lactamase 4084913..4086382 Rhodopirellula baltica SH 1 1789938 NP_867912.1 CDS RB7599 NC_005027.1 4086379 4086498 R hypothetical protein complement(4086379..4086498) Rhodopirellula baltica SH 1 1797180 NP_867913.1 CDS gltX NC_005027.1 4086470 4088107 R PMID: 1541262 best DB hits: BLAST: swissprot:O86528; SYE_STRCO GLUTAMYL-TRNA SYNTHETASE; E=4e-74 ddbj:BAB03828.1; (AP001507) glutamyl-tRNA synthetase [Bacillus; E=2e-65 swissprot:Q9X172; SYE1_THEMA GLUTAMYL-TRNA SYNTHETASE 1; E=3e-65 COG: BH0109; COG0008 Glutamyl- and glutaminyl-tRNA synthetases; E=2e-66 PFAM: PF00749; tRNA synthetases class I (E and; E=1.3e-102; glutamyl-tRNA synthetase complement(4086470..4088107) Rhodopirellula baltica SH 1 1791060 NP_867914.1 CDS RB7601 NC_005027.1 4088110 4088460 R hypothetical protein complement(4088110..4088460) Rhodopirellula baltica SH 1 1795620 NP_867915.1 CDS RB7603 NC_005027.1 4088560 4091070 R best DB hits: BLAST: pir:T23334; hypothetical protein K04H8.3 - Caenorhabditis elegans; E=0.53 PFAM: PF02321; Outer membrane efflux protein; E=0.0021; hypothetical protein complement(4088560..4091070) Rhodopirellula baltica SH 1 1791928 NP_867916.1 CDS RB7607 NC_005027.1 4090995 4091456 D hypothetical protein 4090995..4091456 Rhodopirellula baltica SH 1 1796914 NP_867917.1 CDS RB7610 NC_005027.1 4091594 4092859 D PMID: 98044033 best DB hits: BLAST: pir:C69985; probable DNA-dependent DNA polymerase beta chain yshC -; E=0.23 ddbj:BAB06826.1; (AP001517) DNA-dependent DNA polymerase beta; E=0.41 PFAM: PF02231; PHP domain N-terminal region; E=0.00015; DNA-dependent DNA polymerase beta chain yshC 4091594..4092859 Rhodopirellula baltica SH 1 1794888 NP_867918.1 CDS RB7612 NC_005027.1 4092907 4093317 D hypothetical protein 4092907..4093317 Rhodopirellula baltica SH 1 1792274 NP_867919.1 CDS RB7613 NC_005027.1 4093418 4093558 R hypothetical protein complement(4093418..4093558) Rhodopirellula baltica SH 1 1790410 NP_867920.2 CDS RB7615 NC_005027.1 4093593 4094009 R PMID: 2828880 best DB hits: BLAST: pir:A65018; hypothetical protein b2434 - Escherichia coli (strain; E=2e-19 gb:AAG57552.1; AE005473_7 (AE005473) Z3699 gene product; E=3e-19 pir:F82455; probable acetyltransferase VCA0470 [imported] - Vibrio; E=3e-10 COG: ypeA; COG0456 Acetyltransferases; E=2e-20 VNG1215G; COG0454 Histone acetyltransferase HPA2 and related; E=1e-04 PA4534; COG0456 Acetyltransferases; E=1e-04 PFAM: PF00583; Acetyltransferase (GNAT) family; E=1.7e-26; acetyltransferase complement(4093593..4094009) Rhodopirellula baltica SH 1 1792963 NP_867921.1 CDS RB7616 NC_005027.1 4094087 4094752 R PMID: 99120557 best DB hits: BLAST: pir:G71971; hypothetical protein jhp0125 - Helicobacter pylori; E=9e-04 pir:T36430; hypothetical protein SCF43A.07 - Streptomyces coelicolor; E=0.002 pir:A64537; hypothetical protein HP0137 - Helicobacter pylori; E=0.003 COG: jhp0125; COG1556 Uncharacterized ACR; E=8e-05 APE0258; COG1139 Uncharacterized conserved protein containing a; E=0.007 ykgG; COG1556 Uncharacterized ACR; E=0.009 PFAM: PF02589; Uncharacterized ACR, YkgG family COG; E=2.3e-07; hypothetical protein complement(4094087..4094752) Rhodopirellula baltica SH 1 1793485 NP_867922.1 CDS RB7618 NC_005027.1 4094692 4096143 R PMID: 97426617 PMID: 9278503 best DB hits: BLAST: swissprot:P77536; YKGF_ECOLI HYPOTHETICAL 53.1 KD PROTEIN IN; E=5e-89 gb:AAG54641.1; AE005208_9 (AE005208) orf, hypothetical protein; E=9e-89 pir:T36429; probable iron-sulfur protein SCF43A.06 [similarity] -; E=1e-86 COG: ykgF; COG1139 Uncharacterized conserved protein containing a; E=5e-90 AF0506; COG0247 Fe-S oxidoreductases; E=2e-05 PFAM: PF00037; 4Fe-4S binding domain; E=0.43; electron transport protein ykgF- 4Fe-4S containing oxidoreductase complement(4094692..4096143) Rhodopirellula baltica SH 1 1791107 NP_867923.1 CDS RB7619 NC_005027.1 4096174 4097010 R best DB hits: BLAST: pir:T36428; hypothetical protein SCF43A.05 - Streptomyces coelicolor; E=3e-48 ddbj:BAB05551.1; (AP001513) glycolate oxidase [Bacillus; E=1e-39 pir:H75337; fumarate reductase-related protein - Deinococcus; E=7e-39 COG: BH1832; COG0247 Fe-S oxidoreductases; E=1e-40 MJ0863; COG2048 Heterodisulfide reductase subunit B; E=1e-05 MJ0092_2; COG0247 Fe-S oxidoreductases; E=7e-05 PFAM: PF02754; Domain of unknown function (DUF224); E=9.2e-10; Fe-S oxidoreductase complement(4096174..4097010) Rhodopirellula baltica SH 1 1796737 NP_867924.1 CDS RB7620 NC_005027.1 4096965 4097114 R hypothetical protein complement(4096965..4097114) Rhodopirellula baltica SH 1 1795053 NP_867925.1 CDS RB7621 NC_005027.1 4097160 4098164 D best DB hits: BLAST: swissprot:Q57699; FER5_METJA FERREDOXIN MJ0251 -----; E=8e-10 pir:B72286; ferredoxin - Thermotoga maritima (strain MSB8) -----; E=9e-09 pir:B72206; ferredoxin - Thermotoga maritima (strain MSB8) -----; E=1e-05 COG: MJ0251; COG1146 Ferredoxin 3; E=7e-11 TM1292; COG1149 MinD superfamily P-loop ATPase containing an; E=0.002 AF0427; COG1146 Ferredoxin 3; E=0.004 PFAM: PF00037; 4Fe-4S binding domain; E=0.0025; Fe-S oxidoreductase 4097160..4098164 Rhodopirellula baltica SH 1 1795464 NP_867926.2 CDS fumC NC_005027.1 4098290 4099714 R class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase complement(4098290..4099714) Rhodopirellula baltica SH 1 1794399 NP_867927.1 CDS idnT NC_005027.1 4099907 4101862 D PMID: 9658018 best DB hits: BLAST: swissprot:P39344; IDNT_ECOLI GNT-II SYSTEM L-IDONATE TRANSPORTER; E=1e-14 ddbj:BAA83912.1; (AB024550) GNTP [Bacillus halodurans] -----; E=1e-14 swissprot:Q9ZIJ1; GNUT_PSEAE GLUCONATE PERMEASE ----- pir:; E=4e-12 COG: BH0805; COG2610 H+/gluconate symporter and related permeases; E=1e-15 PFAM: PF02447; GntP family permease; E=2.5e-34; Gnt-II system L-idonate transporter 4099907..4101862 Rhodopirellula baltica SH 1 1792191 NP_867928.1 CDS RB7626 NC_005027.1 4101843 4102148 R hypothetical protein complement(4101843..4102148) Rhodopirellula baltica SH 1 1794150 NP_867929.1 CDS RB7627 NC_005027.1 4102093 4103661 R best DB hits: BLAST: gb:AAF34762.1; AF228345_1 (AF228345) unknown [Listeria; E=6e-93 ddbj:BAB06097.1; (AP001515) BH2378~unknown conserved protein; E=2e-91 pir:F69884; conserved hypothetical protein ymdA - Bacillus subtilis; E=1e-89 COG: BH2378; COG1418 Predicted HD superfamily hydrolase; E=2e-92 PFAM: PF00261; Tropomyosin; E=0.57 PF00013; KH domain; E=6.3e-07 PF01966; HD domain; E=3.4e-21; signal transduction protein complement(4102093..4103661) Rhodopirellula baltica SH 1 1796060 NP_867930.1 CDS RB7628 NC_005027.1 4103661 4104029 R hypothetical protein complement(4103661..4104029) Rhodopirellula baltica SH 1 1792213 NP_867931.1 CDS mesJ NC_005027.1 4103944 4105137 D PMID: 99061957 best DB hits: BLAST: pir:T31465; cell cycle protein homolog mesJ - Heliobacillus mobilis; E=1e-31 swissprot:Q9WZ48; Y579_THEMA HYPOTHETICAL PROTEIN TM0579 -----; E=7e-24 pir:F75424; probable cell cycle protein MesJcytosine; E=2e-21 COG: TM0579; COG0037 Predicted ATPase of the PP-loop superfamily; E=6e-25 mesJ; COG0037 Predicted ATPase of the PP-loop superfamily implicated; E=1e-17 TP0373; COG0037 Predicted ATPase of the PP-loop superfamily; E=6e-17 PFAM: PF01171; Uncharacterized protein family UPF00; E=0.044; cell cycle protein homolog mesJ 4103944..4105137 Rhodopirellula baltica SH 1 1791699 NP_867932.1 CDS RB7631 NC_005027.1 4105185 4105418 D hypothetical protein 4105185..4105418 Rhodopirellula baltica SH 1 1793395 NP_867933.1 CDS RB7632 NC_005027.1 4105304 4105450 R hypothetical protein complement(4105304..4105450) Rhodopirellula baltica SH 1 1793724 NP_867934.1 CDS natA NC_005027.1 4105449 4106270 D best DB hits: BLAST: pir:C69049; ABC transporter (ATP-binding protein) - Methanobacterium; E=5e-47 swissprot:P46903; NATA_BACSU ATP-BINDING TRANSPORT PROTEIN NATA; E=2e-46 pir:F82572; sodium ABC transporter ATP-binding protein XF2329; E=5e-46 COG: MTH1370; COG1131 ABC-type multidrug transport system, ATPase; E=5e-48 PFAM: PF02223; Thymidylate kinase; E=0.42 PF00005; ABC transporter; E=1.6e-61; sodium ABC transporter ATP-binding protein 4105449..4106270 Rhodopirellula baltica SH 1 1795352 NP_867935.1 CDS natB NC_005027.1 4106267 4108588 D best DB hits: BLAST: pir:A75459; sodium extrusion protein NatB - Deinococcus radiodurans; E=2e-15 swissprot:P46904; NATB_BACSU PROTEIN NATB ----- pir: B69666; E=1e-10 ddbj:BAA22237.1; (AB000617) NatB [Bacillus subtilis]; E=5e-05 COG: DR0926; COG1668 ATP-dependent Na+ efflux pump membrane component; E=1e-16 BS_ydiL; COG1266 Predicted metal-dependent membrane protease; E=1e-04 PFAM: PF02517; CAAX amino terminal protease; E=1.1e-19; sodium extrusion protein NatB 4106267..4108588 Rhodopirellula baltica SH 1 1792399 NP_867936.1 CDS RB7637 NC_005027.1 4108602 4110038 R hypothetical protein complement(4108602..4110038) Rhodopirellula baltica SH 1 1792220 NP_867937.1 CDS RB7638 NC_005027.1 4109953 4110333 D hypothetical protein 4109953..4110333 Rhodopirellula baltica SH 1 1791697 NP_867938.1 CDS RB7641 NC_005027.1 4110356 4110484 R hypothetical protein complement(4110356..4110484) Rhodopirellula baltica SH 1 1796509 NP_867939.1 CDS RB7643 NC_005027.1 4110498 4111352 R best DB hits: BLAST: pir:S74796; hypothetical protein sll1020 - Synechocystis sp. (strain; E=2e-34 pir:A75176; dolichyl-phosphate mannose synthase related protein; E=1e-20 pir:D71038; hypothetical protein PH1596 - Pyrococcus horikoshii; E=2e-19 COG: sll1020; COG0463 Glycosyltransferases involved in cell wall; E=2e-35 PFAM: PF00535; Glycosyl transferase; E=1.3e-41; dolichyl-phosphate hexose synthase complement(4110498..4111352) Rhodopirellula baltica SH 1 1794864 NP_867940.1 CDS RB7645 NC_005027.1 4111483 4111716 R hypothetical protein complement(4111483..4111716) Rhodopirellula baltica SH 1 1790956 NP_867941.1 CDS RB7646 NC_005027.1 4111735 4111923 D hypothetical protein 4111735..4111923 Rhodopirellula baltica SH 1 1795277 NP_867942.1 CDS RB7647 NC_005027.1 4111931 4112152 D hypothetical protein 4111931..4112152 Rhodopirellula baltica SH 1 1793064 NP_867943.1 CDS RB7648 NC_005027.1 4112085 4112402 R hypothetical protein complement(4112085..4112402) Rhodopirellula baltica SH 1 1791673 NP_867944.1 CDS RB7649 NC_005027.1 4112093 4112386 R hypothetical protein complement(4112093..4112386) Rhodopirellula baltica SH 1 1796663 NP_867945.1 CDS RB7651 NC_005027.1 4112383 4112517 R hypothetical protein complement(4112383..4112517) Rhodopirellula baltica SH 1 1794943 NP_867946.1 CDS mdh NC_005027.1 4112505 4113452 D PMID: 8661927 PMID: 3133356 best DB hits: BLAST: swissprot:P80040; MDH_CHLAU MALATE DEHYDROGENASE ----- embl:; E=3e-86 swissprot:Q9X4K8; MDH_BACTC MALATE DEHYDROGENASE ----- gb:; E=1e-83 swissprot:Q59202; MDH_BACIS MALATE DEHYDROGENASE ----- pir:; E=1e-83 COG: BH3158; COG0039 Malate/lactate dehydrogenases; E=3e-81 PFAM: PF00984; UDP-glucose/GDP-mannose dehydro; E=0.28 PF00056; lactate/malate dehydrogenase, N; E=1.3e-43 PF02866; lactate/malate dehydrogenase, a; E=1.5e-41; malate dehydrogenase 4112505..4113452 Rhodopirellula baltica SH 1 1794536 NP_867947.1 CDS RB7655 NC_005027.1 4113482 4113631 R hypothetical protein complement(4113482..4113631) Rhodopirellula baltica SH 1 1795461 NP_867948.1 CDS RB7658 NC_005027.1 4113652 4114290 D best DB hits: PFAM: PF02432; Fimbrial, major and minor subuni; E=0.17; signal peptide 4113652..4114290 Rhodopirellula baltica SH 1 1796330 NP_867949.1 CDS hisC NC_005027.1 4114441 4115529 D PMID: 1400209 best DB hits: BLAST: swissprot:P73807; HIS8_SYNY3 HISTIDINOL-PHOSPHATE AMINOTRANSFERASE; E=1e-56 swissprot:P45358; HIS8_ACEXY HISTIDINOL-PHOSPHATE AMINOTRANSFERASE; E=2e-52 gb:AAK00147.1; AF222753_2 (AF222753) aminotransferase; E=2e-43 COG: sll1958; COG0079 Histidinol-phosphate aminotransferase/Tyrosine; E=1e-57 PFAM: PF00155; Aminotransferase class-I; E=5.1e-06 PF00222; Aminotransferase class-II; E=1.3e-17; histidinol-phosphate aminotransferase 4114441..4115529 Rhodopirellula baltica SH 1 1794036 NP_867950.1 CDS hisBD NC_005027.1 4115526 4116134 D best DB hits: BLAST: ddbj:BAB07300.1; (AP001519) imidazoleglycerol-phosphate; E=3e-49 swissprot:O33564; HIS7_RHOSH IMIDAZOLEGLYCEROL-PHOSPHATE; E=1e-48 swissprot:P34047; HIS7_ARATH IMIDAZOLEGLYCEROL-PHOSPHATE; E=2e-48 COG: BH3581; COG0131 Imidazoleglycerol-phosphate dehydratase; E=3e-50 PFAM: PF00475; Imidazoleglycerol-phosphate dehydrat; E=7e-96; imidazoleglycerol-phosphate dehydratase 4115526..4116134 Rhodopirellula baltica SH 1 1791326 NP_867951.1 CDS RB7663 NC_005027.1 4116230 4116733 R best DB hits: BLAST: swissprot:O83845; Y875_TREPA HYPOTHETICAL PROTEIN TP0875 -----; E=1e-09 pir:H72229; conserved hypothetical protein - Thermotoga maritima; E=2e-08 ddbj:BAB04264.1; (AP001508) BH0545~unknown conserved protein; E=1e-05 COG: TP0875; COG0802 Predicted ATPase or kinase; E=1e-10 PFAM: PF02367; Uncharacterised P-loop hydrolase UPF; E=3.9e-22; hypothetical protein complement(4116230..4116733) Rhodopirellula baltica SH 1 1794269 NP_867952.1 CDS RB7665 NC_005027.1 4116710 4116979 D hypothetical protein 4116710..4116979 Rhodopirellula baltica SH 1 1792018 NP_867953.1 CDS RB7666 NC_005027.1 4116766 4116984 R hypothetical protein complement(4116766..4116984) Rhodopirellula baltica SH 1 1790580 NP_867954.1 CDS RB7667 NC_005027.1 4116981 4117097 R hypothetical protein complement(4116981..4117097) Rhodopirellula baltica SH 1 1796431 NP_867955.1 CDS RB7668 NC_005027.1 4117114 4117797 D PMID: 8547819 best DB hits: BLAST: swissprot:P45458; MASY_SOYBN MALATE SYNTHASE, GLYOXYSOMAL (MS); E=0.60; malate synthase 4117114..4117797 Rhodopirellula baltica SH 1 1793508 NP_867956.1 CDS RB7672 NC_005027.1 4117946 4119253 D hypothetical protein 4117946..4119253 Rhodopirellula baltica SH 1 1797159 NP_867957.1 CDS RB7673 NC_005027.1 4119234 4120808 R best DB hits: BLAST: ddbj:BAB05075.1; (AP001511) BH1356~unknown conserved protein; E=1e-25 swissprot:P54465; YQEZ_BACSU HYPOTHETICAL 46.5 KD PROTEIN IN; E=6e-22 gb:AAB89465.1; (AE000979) nodulation protein NfeD (nfeD); E=8e-04 COG: BH1356_1; COG1030 Periplasmic serine proteases (ClpP class); E=1e-17 BH1356_2; COG1585 Membrane protein implicated in regulation of; E=1e-07 AF1781_1; COG1030 Periplasmic serine proteases (ClpP class); E=7e-05 PFAM: PF01957; Protein of unknown function DUF107; E=0.53; periplasmatic serine protease complement(4119234..4120808) Rhodopirellula baltica SH 1 1791542 NP_867958.1 CDS trkH NC_005027.1 4120780 4122597 R PMID: 7896723 best DB hits: BLAST: gb:AAB90400.1; (AE001046) TRK potassium uptake system protein; E=8e-61 pir:G82037; potassium uptake protein TrkH VC2756 [imported] - Vibrio; E=4e-49 swissprot:P44843; TRKH_HAEIN TRK SYSTEM POTASSIUM UPTAKE PROTEIN; E=1e-46 COG: AF0839; COG0168 Trk-type K+ transport systems, membrane components; E=8e-62 NMB0661_2; COG0168 Trk-type K+ transport systems, membrane; E=1e-36 PA3210; COG0168 Trk-type K+ transport systems, membrane components; E=1e-36 PFAM: PF02386; Sodium transport protein; E=1.1e-54; TRK potassium uptake system protein (trkH) complement(4120780..4122597) Rhodopirellula baltica SH 1 1796023 NP_867959.1 CDS pcxB NC_005027.1 4122659 4123339 R PMID: 8407791 best DB hits: BLAST: pir:E83626; protocatechuate 3,4-dioxygenase, beta subunit PA0153; E=1e-14 pir:T35018; protocatechuate 3,4-dioxygenase beta chain -; E=1e-14 gb:AAF65837.1; AF253466_3 (AF253466) protocatechuate; E=3e-14 PFAM: PF00652; QXW lectin repeat; E=0.28 PF00775; Dioxygenase; E=3.6e-18; protocatechuate 3,4-dioxygenase subunit beta complement(4122659..4123339) Rhodopirellula baltica SH 1 1796397 NP_867960.1 CDS RB7681 NC_005027.1 4123209 4123523 R hypothetical protein complement(4123209..4123523) Rhodopirellula baltica SH 1 1790716 NP_867961.1 CDS RB7682 NC_005027.1 4123608 4125095 D hypothetical protein 4123608..4125095 Rhodopirellula baltica SH 1 1792964 NP_867962.1 CDS RB7684 NC_005027.1 4125274 4125573 D hypothetical protein 4125274..4125573 Rhodopirellula baltica SH 1 1795878 NP_867963.1 CDS RB7685 NC_005027.1 4125633 4126799 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein 4125633..4126799 Rhodopirellula baltica SH 1 1793332 NP_867964.1 CDS RB7688 NC_005027.1 4126912 4127307 D hypothetical protein 4126912..4127307 Rhodopirellula baltica SH 1 1796486 NP_867965.1 CDS RB7689 NC_005027.1 4127213 4127620 D signal peptide 4127213..4127620 Rhodopirellula baltica SH 1 1796981 NP_867966.1 CDS RB7692 NC_005027.1 4127641 4128903 D PMID: 8063110 PMID: 8195067 PMID: 9808046 PMID: 11372197 best DB hits: BLAST: gb:AAD05531.1; (AF083240) c-type cytochrome precursor [Shewanella; E=0.74 swissprot:Q57142; C554_NITEU CYTOCHROME C-554 PRECURSOR (C554); E=0.84; c-type cytochrome precursor- periplasmic heme binding protein 4127641..4128903 Rhodopirellula baltica SH 1 1794804 NP_867967.1 CDS RB7694 NC_005027.1 4128786 4130045 D hypothetical protein 4128786..4130045 Rhodopirellula baltica SH 1 1791056 NP_867968.1 CDS RB7698 NC_005027.1 4130042 4131289 D best DB hits: BLAST: ddbj:BAB05140.1; (AP001512) BH1421~unknown conserved protein; E=0.16; hypothetical protein 4130042..4131289 Rhodopirellula baltica SH 1 1793886 NP_867969.1 CDS RB7700 NC_005027.1 4131286 4131441 R hypothetical protein complement(4131286..4131441) Rhodopirellula baltica SH 1 1796445 NP_867970.1 CDS RB7701 NC_005027.1 4131412 4131519 D hypothetical protein 4131412..4131519 Rhodopirellula baltica SH 1 1795674 NP_867971.1 CDS RB7702 NC_005027.1 4131608 4131814 D hypothetical protein 4131608..4131814 Rhodopirellula baltica SH 1 1790920 NP_867972.1 CDS RB7703 NC_005027.1 4131842 4132138 D hypothetical protein 4131842..4132138 Rhodopirellula baltica SH 1 1795439 NP_867973.1 CDS moaB NC_005027.1 4132107 4132631 R PMID: 8361352 best DB hits: BLAST: pir:H69658; molybdopterin precursor biosynthesis moaB - Bacillus; E=9e-25 ddbj:BAB06741.1; (AP001517) molybdopterin precursor biosynthesis; E=4e-22 gb:AAG20033.1; (AE005084) molybdenum cofactor biosynthesis; E=7e-21 COG: BS_moaB; COG0521 Molybdopterin biosynthesis enzymes; E=9e-26 PFAM: PF00994; Molybdenum cofactor biosynthesi; E=0.062; molybdopterin precursor biosynthesis moaB complement(4132107..4132631) Rhodopirellula baltica SH 1 1796354 NP_867974.1 CDS ptfA NC_005027.1 4132628 4134397 R PMID: 20175229 best DB hits: BLAST: ddbj:BAB03332.1; (AB035450) fructose specific permease; E=3e-07 pir:H69626; PTS fructose-specific enzyme IIBC component fruA -; E=5e-07 pir:B81941; probable regulatory protein NMA0946 [imported] -; E=9e-07 COG: BS_fruA_1; COG1762 Phosphotransferase system; E=5e-08 TP0755; COG1762 Phosphotransferase system mannitol/fructose-specific; E=6e-07 VC1826_1; COG1762 Phosphotransferase system; E=8e-07; fructose specific permease complement(4132628..4134397) Rhodopirellula baltica SH 1 1794143 NP_867975.1 CDS RB7709 NC_005027.1 4134343 4134747 R hypothetical protein complement(4134343..4134747) Rhodopirellula baltica SH 1 1792863 NP_867976.1 CDS RB7710 NC_005027.1 4134606 4134917 R hypothetical protein complement(4134606..4134917) Rhodopirellula baltica SH 1 1797190 NP_867977.1 CDS RB7711 NC_005027.1 4134709 4134894 D hypothetical protein 4134709..4134894 Rhodopirellula baltica SH 1 1795955 NP_867978.1 CDS RB7712 NC_005027.1 4134885 4135025 D hypothetical protein 4134885..4135025 Rhodopirellula baltica SH 1 1791895 NP_867979.1 CDS RB7713 NC_005027.1 4134987 4135688 R signal peptide complement(4134987..4135688) Rhodopirellula baltica SH 1 1791372 NP_867980.1 CDS RB7714 NC_005027.1 4135754 4135918 R hypothetical protein complement(4135754..4135918) Rhodopirellula baltica SH 1 1796436 NP_867981.1 CDS RB7716 NC_005027.1 4135891 4136097 D hypothetical protein 4135891..4136097 Rhodopirellula baltica SH 1 1792229 NP_867982.1 CDS RB7717 NC_005027.1 4136155 4136316 D hypothetical protein 4136155..4136316 Rhodopirellula baltica SH 1 1796333 NP_867983.1 CDS RB7718 NC_005027.1 4136242 4136418 R hypothetical protein complement(4136242..4136418) Rhodopirellula baltica SH 1 1796715 NP_867984.1 CDS RB7722 NC_005027.1 4136415 4137251 R hypothetical protein complement(4136415..4137251) Rhodopirellula baltica SH 1 1790162 NP_867985.1 CDS RB7723 NC_005027.1 4137186 4137386 D hypothetical protein 4137186..4137386 Rhodopirellula baltica SH 1 1795100 NP_867986.1 CDS RB7726 NC_005027.1 4137563 4138534 R hypothetical protein complement(4137563..4138534) Rhodopirellula baltica SH 1 1796571 NP_867987.1 CDS RB7727 NC_005027.1 4138569 4138811 D hypothetical protein 4138569..4138811 Rhodopirellula baltica SH 1 1797192 NP_867988.1 CDS RB7728 NC_005027.1 4138779 4139270 R signal peptide complement(4138779..4139270) Rhodopirellula baltica SH 1 1790219 NP_867989.1 CDS RB7729 NC_005027.1 4139239 4139523 R hypothetical protein complement(4139239..4139523) Rhodopirellula baltica SH 1 1796575 NP_867990.1 CDS RB7730 NC_005027.1 4139598 4140044 R hypothetical protein complement(4139598..4140044) Rhodopirellula baltica SH 1 1790361 NP_867991.1 CDS RB7731 NC_005027.1 4140162 4140488 R hypothetical protein complement(4140162..4140488) Rhodopirellula baltica SH 1 1792950 NP_867992.1 CDS RB7733 NC_005027.1 4140525 4140734 R hypothetical protein complement(4140525..4140734) Rhodopirellula baltica SH 1 1790906 NP_867993.1 CDS RB7734 NC_005027.1 4140699 4142543 D hypothetical protein 4140699..4142543 Rhodopirellula baltica SH 1 1790896 NP_867994.1 CDS RB7736 NC_005027.1 4142604 4142771 R hypothetical protein complement(4142604..4142771) Rhodopirellula baltica SH 1 1792876 NP_867995.1 CDS RB7737 NC_005027.1 4142861 4143112 R hypothetical protein complement(4142861..4143112) Rhodopirellula baltica SH 1 1793830 NP_867996.1 CDS RB7739 NC_005027.1 4143120 4144664 R hypothetical protein complement(4143120..4144664) Rhodopirellula baltica SH 1 1791744 NP_867997.1 CDS RB7741 NC_005027.1 4144689 4144817 D hypothetical protein 4144689..4144817 Rhodopirellula baltica SH 1 1793219 NP_867998.1 CDS RB7742 NC_005027.1 4144793 4145209 R hypothetical protein complement(4144793..4145209) Rhodopirellula baltica SH 1 1793145 NP_867999.1 CDS RB7743 NC_005027.1 4145254 4146072 R PMID: 20175755 best DB hits: BLAST: embl:CAB72079.1; (AJ391284) hypothetical protein [Neisseria; E=0.028 pir:D81191; hypothetical protein NMB0509 [imported] - Neisseria; E=0.028; hypothetical protein complement(4145254..4146072) Rhodopirellula baltica SH 1 1794664 NP_868000.1 CDS RB7744 NC_005027.1 4146120 4146569 R hypothetical protein complement(4146120..4146569) Rhodopirellula baltica SH 1 1790113 NP_868001.1 CDS prtB NC_005027.1 4146480 4149623 D PMID: 11158351 best DB hits: BLAST: ddbj:BAA36466.1; (AB015053) serine protease homologue; E=1e-19 gb:AAF80995.1; (AF216702) PrtB [Pseudomonas fluorescens]; E=5e-19 pir:JC5568; serine proteinase h1 (EC 3.4.-.-) precursor - Serratia; E=4e-18 COG: PA3535_1; COG1404 Subtilisin-like serine proteases; E=3e-10 PFAM: PF02223; Thymidylate kinase; E=0.27; serine protease homologue- secreted serine protease 4146480..4149623 Rhodopirellula baltica SH 1 1795970 NP_868002.1 CDS RB7746 NC_005027.1 4149694 4150269 R best DB hits: BLAST: pir:B70535; probable sulfatase (EC 3.1.6.-) atsD - Mycobacterium; E=7e-11 pir:E70533; probable sulfatase (EC 3.1.6.-) atsB - Mycobacterium; E=4e-08 pir:B70643; probable sulfatase (EC 3.1.6.-) atsA - Mycobacterium; E=0.22 COG: Rv0663; COG3119 Arylsulfatase A and related enzymes; E=7e-12; sulfatase atsD complement(4149694..4150269) Rhodopirellula baltica SH 1 1796279 NP_868003.1 CDS RB7747 NC_005027.1 4150256 4150549 D hypothetical protein 4150256..4150549 Rhodopirellula baltica SH 1 1790998 NP_868004.1 CDS RB7748 NC_005027.1 4150491 4150715 D hypothetical protein 4150491..4150715 Rhodopirellula baltica SH 1 1793859 NP_868005.1 CDS RB7749 NC_005027.1 4150677 4150979 R hypothetical protein complement(4150677..4150979) Rhodopirellula baltica SH 1 1794619 NP_868006.1 CDS RB7750 NC_005027.1 4151023 4152765 R PMID: 20365717 best DB hits: BLAST: pir:H82841; conserved hypothetical protein XF0161 [imported] -; E=1e-06 gb:AAB48483.1; (U87814) PEST phosphatase interacting protein [Mus; E=0.060 embl:CAB99171.1; (AL390189) related to transport protein USO1; E=0.15; hypothetical protein complement(4151023..4152765) Rhodopirellula baltica SH 1 1793872 NP_868007.1 CDS RB7752 NC_005027.1 4152765 4153019 R hypothetical protein complement(4152765..4153019) Rhodopirellula baltica SH 1 1790977 NP_868008.1 CDS RB7753 NC_005027.1 4153022 4153987 R hypothetical protein complement(4153022..4153987) Rhodopirellula baltica SH 1 1793808 NP_868009.1 CDS RB7754 NC_005027.1 4154033 4154398 R PMID: 7642487 best DB hits: BLAST: pir:E72348; conserved hypothetical protein - Thermotoga maritima; E=0.001 ddbj:BAB05844.1; (AP001514) transcriptional regulator of; E=0.006 swissprot:P06533; SINR_BACSU SINR PROTEIN ----- pir: B25159; E=0.010 COG: TM0656; COG1396 Predicted transcriptional regulators; E=1e-04 PFAM: PF01381; Helix-turn-helix; E=1.2e-07; transcriptional regulator complement(4154033..4154398) Rhodopirellula baltica SH 1 1791937 NP_868010.1 CDS RB7755 NC_005027.1 4154446 4154631 D hypothetical protein 4154446..4154631 Rhodopirellula baltica SH 1 1791731 NP_868011.1 CDS RB7756 NC_005027.1 4154488 4154712 R hypothetical protein complement(4154488..4154712) Rhodopirellula baltica SH 1 1790194 NP_868012.1 CDS RB7757 NC_005027.1 4154809 4155177 R PMID: 21101824 best DB hits: BLAST: gb:AAG60904.1; AF322013_23 (AF322013) ID479 [Bradyrhizobium; E=2e-04; hypothetical protein complement(4154809..4155177) Rhodopirellula baltica SH 1 1792297 NP_868013.1 CDS RB7759 NC_005027.1 4155419 4156051 D hypothetical protein 4155419..4156051 Rhodopirellula baltica SH 1 1793397 NP_868014.1 CDS RB7760 NC_005027.1 4155488 4156900 R hypothetical protein complement(4155488..4156900) Rhodopirellula baltica SH 1 1796117 NP_868015.1 CDS RB7762 NC_005027.1 4156869 4159847 R PMID: 11157235 PMID: 10347025 PMID: 10966413 best DB hits: BLAST: ddbj:BAB21059.1; (AB037178) xanthan lyase [Bacillus sp. GL1]; E=5e-08 gb:AAG24953.1; AF242413_1 (AF242413) XalA [Paenibacillus; E=3e-07 gb:AAG42262.1; AF318176_1 (AF318176) xanthan lyase XalB; E=0.003; xanthan lyase complement(4156869..4159847) Rhodopirellula baltica SH 1 1790313 NP_868016.1 CDS RB7765 NC_005027.1 4160044 4160757 R best DB hits: BLAST: pir:T32623; hypothetical protein F42A6.9 - Caenorhabditis elegans; E=0.39; hypothetical protein complement(4160044..4160757) Rhodopirellula baltica SH 1 1792434 NP_868017.1 CDS GALNS NC_005027.1 4160901 4162406 R PMID: 8020961 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=9e-25 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=2e-23 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=4e-23 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=1e-21 PFAM: PF00884; Sulfatase; E=3.8e-39; N-acetylgalactosamine 6-sulfate sulfatase (GALNS) complement(4160901..4162406) Rhodopirellula baltica SH 1 1790019 NP_868018.1 CDS RB7771 NC_005027.1 4162365 4162472 D hypothetical protein 4162365..4162472 Rhodopirellula baltica SH 1 1796342 NP_868019.1 CDS atsA NC_005027.1 4162474 4164597 D PMID: 7744061 best DB hits: BLAST: swissprot:P51691; ARS_PSEAE ARYLSULFATASE (ARYL-SULFATE; E=2e-61 pir:S69336; arylsulfatase (EC 3.1.6.1) - Pseudomonas aeruginosa; E=2e-60 pir:E70533; probable sulfatase (EC 3.1.6.-) atsB - Mycobacterium; E=7e-53 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=2e-62 PFAM: PF00884; Sulfatase; E=3.2e-77; arylsulfatase 4162474..4164597 Rhodopirellula baltica SH 1 1795777 NP_868020.1 CDS RB7773 NC_005027.1 4164594 4167062 D PMID: 97000351 best DB hits: BLAST: embl:CAB62685.1; (AL133422) membrane protein.; E=6e-12 pir:A49911; NADH oxidase (hydrogen peroxide-forming) (EC 1.6.-.-) -; E=0.008 swissprot:P26829; DHNA_BACSP NADH DEHYDROGENASE (ALKYL; E=0.024 PFAM: PF01134; Glucose inhibited division prote; E=1.1e-05 PF00070; Pyridine nucleotide-disulphide o; E=1.1e-05 PF02032; Phytoene dehydrogenase related e; E=0.43; NADH-dependant oxidoreductase 4164594..4167062 Rhodopirellula baltica SH 1 1796608 NP_868021.1 CDS RB7775 NC_005027.1 4165560 4167398 R PMID: 20363099 best DB hits: BLAST: ddbj:BAB01977.1; (AP002065) gene_id:T31J18.6~pir F71651~similar; E=0.23; hypothetical protein complement(4165560..4167398) Rhodopirellula baltica SH 1 1793190 NP_868022.1 CDS nosR NC_005027.1 4167044 4168843 D PMID: 20416234 best DB hits: BLAST: embl:CAB53350.1; (AJ010260) NosR protein [Paracoccus; E=0.001 gb:AAD09156.1; (AF047429) regulatory protein NosR [Achromobacter; E=0.001 embl:CAC03728.1; (AJ297529) RnfG protein [Pseudomonas stutzeri; E=0.094; NosR regulatory protein 4167044..4168843 Rhodopirellula baltica SH 1 1795187 NP_868023.1 CDS cyaA NC_005027.1 4168833 4170992 R PMID: 9523018 PMID: 8418825 best DB hits: BLAST: swissprot:P40137; CYAA_STIAU ADENYLATE CYCLASE 1 (ATP; E=8e-24 pir:S74929; adenylate cyclase (EC 4.6.1.1) - Synechocystis sp.; E=1e-23 ddbj:BAA13997.1; (D89622) adenylate cyclase [Anabaena sp.]; E=4e-23 COG: sll0646; COG2114 Adenylate cyclase, family 3 (some proteins contain; E=1e-24 slr1991_2; COG2114 Adenylate cyclase, family 3 (some proteins; E=3e-08 Rv1625c; COG2114 Adenylate cyclase, family 3 (some proteins contain; E=4e-08 PFAM: PF00211; Adenylate and Guanylate cyclase; E=2.7e-39; adenylate cyclase complement(4168833..4170992) Rhodopirellula baltica SH 1 1795376 NP_868024.1 CDS RB7785 NC_005027.1 4170800 4171828 R PMID: 20150912 PMID: 97000351 best DB hits: BLAST: pir:B81402; hypothetical protein Cj0554 [imported] - Campylobacter; E=4e-57 embl:CAB56667.1; (AL121596) hypothetical protein SCF51A.15c; E=4e-54; hypothetical protein complement(4170800..4171828) Rhodopirellula baltica SH 1 1793152 NP_868025.1 CDS RB7786 NC_005027.1 4171854 4172318 R hypothetical protein complement(4171854..4172318) Rhodopirellula baltica SH 1 1796550 NP_868026.1 CDS RB7789 NC_005027.1 4172308 4173246 D PMID: 8921895 best DB hits: BLAST: swissprot:P44677; TOLB_HAEIN TOLB PROTEIN PRECURSOR ----- pir:; E=0.67 pir:JC5213; tolB protein - Haemophilus influenzae ----- gb:; E=0.72; tolB protein [precursor] 4172308..4173246 Rhodopirellula baltica SH 1 1792802 NP_868027.1 CDS RB7790 NC_005027.1 4173233 4173502 D hypothetical protein 4173233..4173502 Rhodopirellula baltica SH 1 1791135 NP_868028.1 CDS RB7791 NC_005027.1 4173444 4175045 D PMID: 12024217; hypothetical protein 4173444..4175045 Rhodopirellula baltica SH 1 1790336 NP_868029.1 CDS RB7792 NC_005027.1 4173508 4174068 R signal peptide complement(4173508..4174068) Rhodopirellula baltica SH 1 1796302 NP_868030.1 CDS nccH NC_005027.1 4175197 4175742 D PMID: 7961470 best DB hits: BLAST: swissprot:Q44583; NCCH_ALCXX RNA POLYMERASE SIGMA FACTOR NCCH; E=6e-07 pir:H82073; RNA polymerase sigma-E factor VC2467 [imported] - Vibrio; E=3e-06 embl:CAB55345.1; (AJ010584) ECF sigma factor [Streptomyces; E=2e-05 COG: VC2467; COG1595 DNA-directed RNA polymerase specialized sigma; E=3e-07 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=9.7e-11; RNA polymerase sigma factor nccH 4175197..4175742 Rhodopirellula baltica SH 1 1795164 NP_868031.1 CDS pkn NC_005027.1 4175770 4178583 D PMID: 7774814 best DB hits: BLAST: embl:CAB94054.1; (AL358672) serinethreonine-protein; E=3e-29 pir:T35491; probable serinethreonine-specific protein kinase pkaF -; E=1e-25 gb:AAF79944.1; AF233851_2 (AF233851) eukaryotic-type; E=1e-25 COG: Rv0015c; COG0515 Serine/threonine protein kinases; E=3e-26 PFAM: PF00069; Protein kinase domain; E=7.1e-37; serine/threonine-protein kinase 4175770..4178583 Rhodopirellula baltica SH 1 1797214 NP_868032.1 CDS RB7799 NC_005027.1 4178548 4178730 R hypothetical protein complement(4178548..4178730) Rhodopirellula baltica SH 1 1792005 NP_868033.1 CDS RB7800 NC_005027.1 4178948 4179349 R PMID: 11759840; hypothetical protein complement(4178948..4179349) Rhodopirellula baltica SH 1 1797212 NP_868034.1 CDS RB7801 NC_005027.1 4179441 4180505 R hypothetical protein complement(4179441..4180505) Rhodopirellula baltica SH 1 1795772 NP_868035.1 CDS uroD NC_005027.1 4180502 4182523 R best DB hits: BLAST: pir:D75432; uroporphyrinogen decarboxylase - Deinococcus radiodurans; E=2e-74 swissprot:Q9RV96; DCUP_DEIRA UROPORPHYRINOGEN DECARBOXYLASE; E=2e-74 swissprot:O69861; DCUP_STRCO UROPORPHYRINOGEN DECARBOXYLASE; E=1e-73 COG: DR1133; COG0407 Uroporphyrinogen-III decarboxylase; E=2e-75 Rv0260c_1; COG1587 Uroporphyrinogen-III synthase; E=7e-12 PFAM: PF02602; Uroporphyrinogen-III synthase HemD; E=4.3e-13 PF01208; Uroporphyrinogen decarboxylase (URO-; E=5.6e-144; uroporphyrinogen III synthase, uroporhyrinogen decarboxylase complement(4180502..4182523) Rhodopirellula baltica SH 1 1797152 NP_868036.1 CDS RB7807 NC_005027.1 4182504 4183319 D best DB hits: BLAST: pir:B69997; conserved hypothetical protein ytmQ - Bacillus subtilis; E=1e-15 pir:G82761; conserved hypothetical protein XF0784 [imported] -; E=3e-15 gb:AAK04847.1; AE006308_7 (AE006308) HYPOTHETICAL PROTEIN; E=1e-14 COG: BS_ytmQ; COG0220 Predicted S-adenosylmethionine-dependent; E=1e-16 PFAM: PF02390; methyltransferase; E=2e-41; methyltransferase 4182504..4183319 Rhodopirellula baltica SH 1 1794343 NP_868037.1 CDS RB7812 NC_005027.1 4183621 4184409 R PMID: 98263372 best DB hits: BLAST: pir:B83395; probable enoyl-CoA hydrataseisomerase PA2013 [imported]; E=4e-17 pir:D72628; probable 3-hydroxybutyryl-CoA dehydratase APE1484 -; E=7e-16 gb:AAC24330.1; (AF029714) PhaB [Pseudomonas putida]; E=3e-14 COG: PA2013; COG1024 Enoyl-CoA hydratase/carnithine racemase; E=4e-18 PFAM: PF00378; Enoyl-CoA hydratase/isomerase; E=5.7e-27; enoyl-CoA hydratase complement(4183621..4184409) Rhodopirellula baltica SH 1 1792973 NP_868038.1 CDS RB7813 NC_005027.1 4184462 4185385 R PMID: 20437337 best DB hits: BLAST: pir:D83184; conserved hypothetical protein PA3683 [imported] -; E=4e-42 pir:E82234; conserved hypothetical protein VC1165 [imported] -; E=9e-42 swissprot:P37348; YECE_ECOLI HYPOTHETICAL 31.5 KD PROTEIN IN; E=1e-39 COG: PA3683; COG1801 Uncharacterized ACR; E=4e-43 PFAM: PF01904; Protein of unknown function D; E=1.6e-11; hypothetical protein complement(4184462..4185385) Rhodopirellula baltica SH 1 1791401 NP_868039.1 CDS RB7815 NC_005027.1 4185351 4185758 D hypothetical protein 4185351..4185758 Rhodopirellula baltica SH 1 1791943 NP_868040.1 CDS rpsL NC_005027.1 4185730 4186095 D interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 4185730..4186095 Rhodopirellula baltica SH 1 1791885 NP_868041.1 CDS rpsG NC_005027.1 4186170 4186643 D binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 4186170..4186643 Rhodopirellula baltica SH 1 1792604 NP_868042.1 CDS fusA NC_005027.1 4186706 4188880 D PMID: 8070396 PMID: 11054294 best DB hits: BLAST: embl:CAB81852.1; (AL161691) elongation factor G [Streptomyces; E=1e-147 swissprot:O66428; EFG_AQUAE ELONGATION FACTOR G (EF-G) -----; E=1e-145 swissprot:P38525; EFG_THEMA ELONGATION FACTOR G (EF-G) -----; E=1e-145 COG: aq_001; COG0480 Translation elongation and release factors (GTPases); E=1e-146 jhp1118; COG0480 Translation elongation and release factors; E=1e-139 BH0131; COG0480 Translation elongation and release factors (GTPases); E=1e-138 PFAM: PF01894; Uncharacterised protein family UPF; E=0.082 PF00009; Elongation factor Tu family; E=3.4e-123 PF00679; Elongation factor G C-terminus; E=1.2e-42; elongation factor G 4186706..4188880 Rhodopirellula baltica SH 1 1792103 NP_868043.1 CDS RB7822 NC_005027.1 4189064 4189612 R PMID: 20406833 best DB hits: BLAST: pir:G82206; hypothetical protein VC1375 [imported] - Vibrio cholerae; E=9e-09; hypothetical protein complement(4189064..4189612) Rhodopirellula baltica SH 1 1790153 NP_868044.1 CDS RB7823 NC_005027.1 4189704 4191209 R PMID: 8907187 PMID: 10029535 best DB hits: BLAST: pir:D70479; probable transaminase (EC 2.6.1.-) aspC2 [similarity] -; E=1e-111 pir:E83056; probable aminotransferase PA4715 [imported] -; E=1e-100 swissprot:P77434; YFDZ_ECOLI HYPOTHETICAL AMINOTRANSFERASE YFDZ; E=4e-97 COG: aq_2094; COG0436 PLP-dependent aminotransferases; E=1e-112 PFAM: PF00155; Aminotransferase class-I; E=7.9e-34; transaminase complement(4189704..4191209) Rhodopirellula baltica SH 1 1796383 NP_868045.1 CDS RB7824 NC_005027.1 4191139 4191699 R hypothetical protein complement(4191139..4191699) Rhodopirellula baltica SH 1 1793448 NP_868046.1 CDS RB7825 NC_005027.1 4191369 4191662 R hypothetical protein complement(4191369..4191662) Rhodopirellula baltica SH 1 1795509 NP_868047.1 CDS RB7826 NC_005027.1 4191725 4191901 R hypothetical protein complement(4191725..4191901) Rhodopirellula baltica SH 1 1791445 NP_868048.1 CDS RB7827 NC_005027.1 4191785 4191946 D hypothetical protein 4191785..4191946 Rhodopirellula baltica SH 1 1791457 NP_868049.1 CDS RB7828 NC_005027.1 4191915 4192037 R hypothetical protein complement(4191915..4192037) Rhodopirellula baltica SH 1 1790463 NP_868050.1 CDS rpsJ NC_005027.1 4192031 4192357 D PMID: 7037196 PMID: 3892488 PMID: 7007073 best DB hits: BLAST: swissprot:P44378; RS10_HAEIN 30S RIBOSOMAL PROTEIN S10 -----; E=2e-26 pir:E81234; 30S ribosomal protein S10 NMB0140 [imported] - Neisseria; E=4e-25 swissprot:P48851; RS10_NEIGO 30S RIBOSOMAL PROTEIN S10 -----; E=6e-25 COG: HI0776; COG0051 Ribosomal protein S10; E=2e-27 PFAM: PF00338; Ribosomal protein S10p/S20e; E=2.8e-41; 30S ribosomal protein S10 4192031..4192357 Rhodopirellula baltica SH 1 1796618 NP_868051.1 CDS RB7832 NC_005027.1 4192499 4192651 D hypothetical protein 4192499..4192651 Rhodopirellula baltica SH 1 1796224 NP_868052.1 CDS rplC NC_005027.1 4192692 4193378 D PMID: 3892488 PMID: 365579 best DB hits: BLAST: swissprot:P52860; RL3_THETH 50S RIBOSOMAL PROTEIN L3 -----; E=1e-47 embl:CAB82070.1; (AL161803) 50S ribosomal protein L3; E=7e-45 swissprot:P73320; RL3_SYNY3 50S RIBOSOMAL PROTEIN L3 -----; E=3e-42 COG: Rv0701; COG0087 Ribosomal protein L3; E=4e-43 PFAM: PF00297; Ribosomal protein L3; E=2.7e-71; 50S ribosomal protein L3 4192692..4193378 Rhodopirellula baltica SH 1 1796223 NP_868053.1 CDS rplD NC_005027.1 4193390 4194058 D L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 4193390..4194058 Rhodopirellula baltica SH 1 1795927 NP_868054.1 CDS rplW NC_005027.1 4194060 4194383 D PMID: 8790600 best DB hits: BLAST: swissprot:P55839; RL23_ACTAC 50S RIBOSOMAL PROTEIN L23 -----; E=1e-12 gb:AAK03497.1; (AE006177) RpL23 [Pasteurella multocida]; E=2e-12 pir:C83116; 50S ribosomal protein L23 PA4261 [imported] -; E=3e-12 COG: PA4261; COG0089 Ribosomal protein L23; E=3e-13 PFAM: PF00276; Ribosomal protein L23; E=6.9e-27; 50S ribosomal protein L23 4194060..4194383 Rhodopirellula baltica SH 1 1791061 NP_868055.1 CDS rplB NC_005027.1 4194481 4195341 D one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 4194481..4195341 Rhodopirellula baltica SH 1 1790365 NP_868056.1 CDS rpsS NC_005027.1 4195376 4195645 D PMID: 3892488 PMID: 348496 PMID: 10094780 best DB hits: BLAST: pir:B82059; ribosomal protein S19 VC2592 [imported] - Vibrio; E=2e-23 swissprot:P02375; RS19_ECOLI 30S RIBOSOMAL PROTEIN S19 -----; E=2e-23 swissprot:P44385; RS19_HAEIN 30S RIBOSOMAL PROTEIN S19 -----; E=5e-23 COG: VC2592; COG0185 Ribosomal protein S19; E=2e-24 PFAM: PF00203; Ribosomal protein S19; E=3.7e-42; ribosomal protein S19 4195376..4195645 Rhodopirellula baltica SH 1 1796411 NP_868057.1 CDS rplV NC_005027.1 4195706 4196065 D PMID: 3892488 PMID: 7007072 best DB hits: BLAST: pir:E81231; 50S ribosomal protein L22 NMB0147 [imported] - Neisseria; E=2e-17 swissprot:P02423; RL22_ECOLI 50S RIBOSOMAL PROTEIN L22 -----; E=9e-16 pir:A82059; ribosomal protein L22 VC2591 [imported] - Vibrio; E=3e-14 COG: NMB0147; COG0091 Ribosomal protein L22; E=2e-18 PFAM: PF00237; Ribosomal protein L22p/L17e; E=2.2e-31; 50S ribosomal protein L22 4195706..4196065 Rhodopirellula baltica SH 1 1796088 NP_868058.1 CDS rpsC NC_005027.1 4196161 4196871 D PMID: 2222862 best DB hits: BLAST: swissprot:Q9Z9K8; RS3_BACHD 30S RIBOSOMAL PROTEIN S3 -----; E=4e-50 swissprot:O66437; RS3_AQUAE 30S RIBOSOMAL PROTEIN S3 -----; E=6e-50 pir:A81665; ribosomal protein S3 TC0809 [imported] - Chlamydia; E=1e-49 COG: BH0140; COG0092 Ribosomal protein S3; E=4e-51 PFAM: PF00417; Ribosomal protein S3, N-termin; E=1.2e-28 PF00013; KH domain; E=0.014 PF00189; Ribosomal protein S3, C-termin; E=4.1e-43; 30S ribosomal protein S3 4196161..4196871 Rhodopirellula baltica SH 1 1791085 NP_868059.1 CDS rplP NC_005027.1 4196810 4197226 D located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 4196810..4197226 Rhodopirellula baltica SH 1 1795271 NP_868060.1 CDS rpmC NC_005027.1 4197405 4197623 D PMID: 4018095 best DB hits: BLAST: embl:CAB82078.1; (AL161803) 50S ribosomal protein L29; E=3e-04 swissprot:O32989; RL29_MYCLE 50S RIBOSOMAL PROTEIN L29 -----; E=4e-04 swissprot:P95057; RL29_MYCTU 50S RIBOSOMAL PROTEIN L29 -----; E=0.002 COG: Rv0709; COG0255 Ribosomal protein L29; E=2e-04 PFAM: PF00831; Ribosomal L29 protein; E=2e-14; 50S ribosomal protein L29 4197405..4197623 Rhodopirellula baltica SH 1 1796457 NP_868061.1 CDS rpsQ NC_005027.1 4197700 4198026 D PMID: 344065 best DB hits: BLAST: swissprot:P02373; RS17_ECOLI 30S RIBOSOMAL PROTEIN S17 -----; E=1e-14 pir:E82058; ribosomal protein S17 VC2587 [imported] - Vibrio; E=2e-13 swissprot:P46175; RS17_BUCAK 30S RIBOSOMAL PROTEIN S17 -----; E=2e-13 COG: rpsQ; COG0186 Ribosomal protein S17; E=1e-15 PFAM: PF00366; Ribosomal protein S17; E=5.2e-27; 30S ribosomal protein S17 4197700..4198026 Rhodopirellula baltica SH 1 1790861 NP_868062.1 CDS rplN NC_005027.1 4198081 4198449 D PMID: 2508062 PMID: 4018095 PMID: 8805509 best DB hits: BLAST: swissprot:P95062; RL14_MYCTU 50S RIBOSOMAL PROTEIN L14 -----; E=5e-32 swissprot:O32993; RL14_MYCLE 50S RIBOSOMAL PROTEIN L14 -----; E=5e-32 swissprot:Q9Z9K4; RL14_BACHD 50S RIBOSOMAL PROTEIN L14 -----; E=2e-31 COG: Rv0714; COG0093 Ribosomal protein L14; E=2e-32 PFAM: PF00238; Ribosomal protein L14p/L23e; E=2.6e-73; 50S ribosomal protein L14 4198081..4198449 Rhodopirellula baltica SH 1 1795442 NP_868063.1 CDS rplX NC_005027.1 4198529 4198876 D PMID: 4018095 best DB hits: BLAST: swissprot:Q9Z9K3; RL24_BACHD 50S RIBOSOMAL PROTEIN L24 -----; E=5e-15 swissprot:P04455; RL24_BACST 50S RIBOSOMAL PROTEIN L24 -----; E=4e-14 swissprot:P12876; RL24_BACSU 50S RIBOSOMAL PROTEIN L24 (BL23) (12; E=9e-14 COG: BH0145; COG0198 Ribosomal protein L24; E=5e-16 PFAM: PF00467; KOW motif; E=4.2e-18; 50S ribosomal protein L24 4198529..4198876 Rhodopirellula baltica SH 1 1793822 NP_868064.1 CDS rplE NC_005027.1 4198935 4199525 D part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 4198935..4199525 Rhodopirellula baltica SH 1 1797206 NP_868065.1 CDS rpsN NC_005027.1 4199624 4199809 D best DB hits: BLAST: swissprot:Q9Z9K1; RS14_BACHD 30S RIBOSOMAL PROTEIN S14 -----; E=2e-09 swissprot:P24320; RS14_THETH 30S RIBOSOMAL PROTEIN S14 -----; E=8e-10 pir:S15440; ribosomal protein S14 - Thermus aquaticus (strain; E=9e-10 COG: CPn0937; COG0199 Ribosomal protein S14; E=2e-06 PFAM: PF00253; Ribosomal protein S14p/S29e; E=2.1e-27; 30 S ribosomal protein S14 4199624..4199809 Rhodopirellula baltica SH 1 1792611 NP_868066.1 CDS rpsH NC_005027.1 4199839 4200240 D PMID: 6806564 best DB hits: BLAST: swissprot:Q9Z9K0; RS8_BACHD 30S RIBOSOMAL PROTEIN S8 -----; E=2e-31 swissprot:P12879; RS8_BACSU 30S RIBOSOMAL PROTEIN S8 (BS8) -----; E=1e-30 pir:G69699; ribosomal protein S8 - Bacillus subtilis ----- ddbj:; E=4e-30 COG: BH0148; COG0096 Ribosomal protein S8; E=2e-32 PFAM: PF00410; Ribosomal protein S8; E=1.9e-63; 30S ribosomal protein S8 4199839..4200240 Rhodopirellula baltica SH 1 1794278 NP_868067.1 CDS rplF NC_005027.1 4200306 4200851 D ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 4200306..4200851 Rhodopirellula baltica SH 1 1789933 NP_868068.1 CDS rplR NC_005027.1 4200854 4201303 D PMID: 3542562 best DB hits: BLAST: swissprot:Q9ZAE3; RL18_THEMA 50S RIBOSOMAL PROTEIN L18 -----; E=4e-21 embl:CAA79793.1; (Z21677) ribosomal protein L18 [Thermotoga; E=4e-20 swissprot:O24704; RL18_SYNP6 50S RIBOSOMAL PROTEIN L18 -----; E=1e-19 COG: TM1484; COG0256 Ribosomal protein L18; E=4e-22 PFAM: PF00861; Ribosomal L18p/L5e family; E=3.7e-41; 50S ribosomal protein L18 4200854..4201303 Rhodopirellula baltica SH 1 1791241 NP_868069.1 CDS rpsE NC_005027.1 4201351 4201884 D PMID: 6806564 PMID: 6363400 best DB hits: BLAST: swissprot:P21467; RS5_BACSU 30S RIBOSOMAL PROTEIN S5 (BS5) -----; E=1e-31 swissprot:Q9Z9J7; RS5_BACHD 30S RIBOSOMAL PROTEIN S5 -----; E=1e-31 pir:A81233; 30s ribosomal protein S5 NMB0159 [imported] - Neisseria; E=3e-31 COG: BS_rpsE; COG0098 Ribosomal protein S5; E=9e-33 PFAM: PF00333; Ribosomal protein S5; E=1.7e-62; 30S ribosomal protein S5 4201351..4201884 Rhodopirellula baltica SH 1 1793350 NP_868070.1 CDS rplO NC_005027.1 4202048 4202542 D PMID: 4018095 best DB hits: BLAST: swissprot:O67561; RL15_AQUAE 50S RIBOSOMAL PROTEIN L15 -----; E=3e-27 swissprot:Q9X1J0; RL15_THEMA 50S RIBOSOMAL PROTEIN L15 -----; E=1e-25 swissprot:O83237; RL15_TREPA 50S RIBOSOMAL PROTEIN L15 -----; E=1e-23 COG: aq_1642; COG0200 Ribosomal protein L15; E=3e-28 PFAM: PF01305; Ribosomal protein L15 amino te; E=5.2e-35 PF00256; Ribosomal protein L15; E=1.8e-19; 50S ribosomal protein L15 4202048..4202542 Rhodopirellula baltica SH 1 1794317 NP_868071.1 CDS secY NC_005027.1 4202820 4204214 D forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 4202820..4204214 Rhodopirellula baltica SH 1 1793997 NP_868072.1 CDS adk NC_005027.1 4204183 4204806 D PMID: 9300823 PMID: 1554691 PMID: 9715904 best DB hits: BLAST: swissprot:O24706; KAD_SYNP6 ADENYLATE KINASE (ATP-AMP; E=3e-26 swissprot:P43414; KAD_STRCO ADENYLATE KINASE (ATP-AMP; E=3e-26 swissprot:P27142; KAD_BACST ADENYLATE KINASE (ATP-AMP; E=8e-26 COG: Rv0733; COG0563 Adenylate kinase and related kinases; E=3e-26 PFAM: PF02223; Thymidylate kinase; E=0.27 PF01202; Shikimate kinase; E=0.041 PF01712; Deoxynucleoside kinase; E=0.27; adenylate kinase 4204183..4204806 Rhodopirellula baltica SH 1 1796540 NP_868073.1 CDS RB7868 NC_005027.1 4204869 4205570 R PMID: 97061201 best DB hits: BLAST: pir:S75290; hypothetical protein sll1289 - Synechocystis sp. (strain; E=3e-20 pir:G70687; hypothetical protein Rv1732c - Mycobacterium; E=1e-17 gb:AAF87891.1; AC015447_1 (AC015447) Hypothetical protein; E=1e-15 COG: sll1289; COG0526 Thiol-disulfide isomerase and thioredoxins; E=3e-21; hypothetical protein complement(4204869..4205570) Rhodopirellula baltica SH 1 1796269 NP_868074.1 CDS RB7869 NC_005027.1 4205582 4206676 R PMID: 8098033 best DB hits: BLAST: pir:D81057; GDSL lipase NMB1674 [imported] -; E=4e-13 gb:AAG54851.1; AE005230_11 (AE005230) acyl-CoA thioesterase I; E=9e-11 swissprot:P29679; TESA_ECOLI ACYL-COA THIOESTERASE I PRECURSOR; E=2e-10 COG: NMB1674; COG2755 Lysophospholipase L1 and related esterases; E=3e-14 PFAM: PF00657; Lipase/Acylhydrolase with GDSL-li; E=0.59; GDSL lipase complement(4205582..4206676) Rhodopirellula baltica SH 1 1790322 NP_868075.1 CDS RB7871 NC_005027.1 4206608 4208176 D PMID: 12004073; signal peptide 4206608..4208176 Rhodopirellula baltica SH 1 1790373 NP_868076.1 CDS arsA NC_005027.1 4208176 4209654 D PMID: 7910580 PMID: 1572648 best DB hits: BLAST: gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=4e-58 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=4e-58 pdb:1E2S; P Chain P, Crystal Structure Of An Arylsulfatase A; E=4e-57 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=5e-25 PFAM: PF00884; Sulfatase; E=3.3e-84; arylsulfatase 4208176..4209654 Rhodopirellula baltica SH 1 1796341 NP_868077.1 CDS GALNS NC_005027.1 4209807 4211261 D PMID: 20164110 best DB hits: BLAST: gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=2e-35 ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=6e-35 gb:AAF30402.1; AF109924_1 (AF109924) sulfatase 1 precursor [Helix; E=2e-30 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=2e-26 PA0924; COG3083 Predicted hydrolase of alkaline phosphatase; E=0.002 PFAM: PF00884; Sulfatase; E=3.3e-51; N-acetylgalactosamine-6-sulfatase 4209807..4211261 Rhodopirellula baltica SH 1 1792161 NP_868078.1 CDS RB7881 NC_005027.1 4211388 4211615 R hypothetical protein complement(4211388..4211615) Rhodopirellula baltica SH 1 1796506 NP_868079.1 CDS mutL NC_005027.1 4211572 4213689 D PMID: 8760914 best DB hits: BLAST: pir:C81860; DNA mismatch repair protein NMA1655 [imported] -; E=8e-97 pir:B81084; mismatch repair protein MutL NMB1442 [imported] -; E=6e-95 ddbj:BAB06087.1; (AP001515) DNA mismatch repair protein [Bacillus; E=1e-85 COG: NMB1442; COG0323 DNA mismatch repair enzyme (predicted ATPase); E=6e-96 PFAM: PF02518; Histidine kinase-, DNA gyrase; E=0.00053 PF01119; DNA mismatch repair protein; E=8.5e-57; DNA mismatch repair protein 4211572..4213689 Rhodopirellula baltica SH 1 1791498 NP_868080.1 CDS pdxA NC_005027.1 4213686 4214741 D PMID: 2670894 best DB hits: BLAST: pir:H70373; pyridoxal phosphate biosynthetic protein PdxA - Aquifex; E=3e-45 pir:S77070; pyridoxal phosphate biosynthetic protein pdxA -; E=1e-44 pir:A83572; pyridoxal phosphate biosynthetic protein PdxA PA0593; E=2e-43 COG: aq_852; COG1995 Pyridoxin biosynthesis protein of unknown function; E=3e-46; pyridoxal phosphate biosynthetic protein PdxA 4213686..4214741 Rhodopirellula baltica SH 1 1796393 NP_868081.1 CDS RB7886 NC_005027.1 4214726 4216519 D hypothetical protein 4214726..4216519 Rhodopirellula baltica SH 1 1796529 NP_868082.1 CDS tufA NC_005027.1 4217484 4218680 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 4217484..4218680 Rhodopirellula baltica SH 1 1794559 NP_868083.1 CDS secE NC_005027.1 4218945 4219403 D best DB hits: PFAM: PF00584; SecE/Sec61-gamma subunits of protein; E=2.2e-07; SecE protein 4218945..4219403 Rhodopirellula baltica SH 1 1791409 NP_868084.1 CDS nusG NC_005027.1 4219400 4220077 D PMID: 2137819 PMID: 1532577 PMID: 7505669 PMID: 8422985 best DB hits: BLAST: gb:AAK03828.1; (AE006211) NusG [Pasteurella multocida]; E=3e-27 pir:A82338; transcription antitermination protein NusG VC0323; E=6e-26 gb:AAF33495.1; (AF170176) 99% identity over 181 amino acids with; E=8e-25 COG: VC0323; COG0250 Transcription antiterminator; E=6e-27 PFAM: PF02357; Transcription termination facto; E=2.9e-10 PF00467; KOW motif; E=0.37; transcription antiterminator NusG 4219400..4220077 Rhodopirellula baltica SH 1 1796168 NP_868085.1 CDS rplK NC_005027.1 4220226 4220651 D PMID: 8181706 PMID: 7715599 PMID: 9731302 best DB hits: BLAST: ddbj:BAB03838.1; (AP001507) 50S ribosomal protein L11 [Bacillus; E=5e-37 swissprot:P36254; RL11_STACA 50S RIBOSOMAL PROTEIN L11 -----; E=1e-36 swissprot:O06443; RL11_STAAU 50S RIBOSOMAL PROTEIN L11 -----; E=1e-36 COG: BH0119; COG0080 Ribosomal protein L11; E=5e-38 PFAM: PF00298; Ribosomal protein L11; E=1.4e-62; 50S ribosomal protein L11 4220226..4220651 Rhodopirellula baltica SH 1 1792618 NP_868086.1 CDS msrB NC_005027.1 4220692 4221276 R PMID: 97426617 PMID: 9278503 best DB hits: BLAST: swissprot:P39903; YEAA_ECOLI HYPOTHETICAL 15.5 KDA PROTEIN IN; E=5e-32 gb:AAG51964.1; AC024260_2 (AC024260) transcriptional regulator,; E=3e-31 ddbj:BAA15575.1; (D90821) F44E2.6 protein [Escherichia coli]; E=4e-30 COG: yeaA; COG0229 Conserved domain frequently associated with peptide; E=5e-33 HI1455_2; COG0229 Conserved domain frequently associated with; E=3e-29 BS_yppQ; COG0229 Conserved domain frequently associated with peptide; E=2e-28 PFAM: PF01641; Domain of unknown function DUF25; E=4.7e-66; peptide methionine sulfoxide reductase complement(4220692..4221276) Rhodopirellula baltica SH 1 1795135 NP_868087.1 CDS RB7901 NC_005027.1 4221293 4221613 R hypothetical protein complement(4221293..4221613) Rhodopirellula baltica SH 1 1791567 NP_868088.1 CDS RB7902 NC_005027.1 4221555 4221755 D hypothetical protein 4221555..4221755 Rhodopirellula baltica SH 1 1795577 NP_868089.1 CDS RB7903 NC_005027.1 4221689 4222915 D PMID: 97221617 best DB hits: BLAST: gb:AAK03847.1; (AE006213) unknown [Pasteurella multocida]; E=2e-43 pir:E70943; probable ABC-type sugar transport protein -; E=1e-42 embl:CAB77334.1; (AL160331) ABC transporter ATP-binding protein; E=1e-42 COG: Rv2038c; COG1130 ABC-type sugar/spermidine/putrescine transport; E=9e-44 PA0280; COG1118 ABC-type sulfate/molybdate transport systems, ATPase; E=5e-41 BH1140; COG1130 ABC-type sugar/spermidine/putrescine transport; E=5e-41 PFAM: PF00071; Ras family; E=0.056 PF00005; ABC transporter; E=8.4e-47; ABC transporter 4221689..4222915 Rhodopirellula baltica SH 1 1794514 NP_868090.1 CDS RB7906 NC_005027.1 4222930 4223628 D best DB hits: BLAST: pir:B82738; conserved hypothetical protein XF0979 [imported] -; E=2e-14 pir:G81234; conserved hypothetical protein NMB0122 [imported] -; E=3e-14 pir:A82360; conserved hypothetical protein VC0146 [imported] -; E=9e-14 COG: XF0979; COG0742 N6-adenine-specific methylase; E=2e-15 PAB1237; COG1092 Predicted SAM-dependent methyltransferases; E=7e-04 RP545; COG0742 N6-adenine-specific methylase; E=0.006; hypothetical protein 4222930..4223628 Rhodopirellula baltica SH 1 1794448 NP_868091.1 CDS RB7907 NC_005027.1 4223603 4224445 R PMID: 8445654 best DB hits: BLAST: pir:C75472; probable lipase - Deinococcus radiodurans (strain R1); E=2e-17 pir:E70914; probable lipO protein - Mycobacterium tuberculosis; E=3e-07 pir:H70731; probable esterase - Mycobacterium tuberculosis (strain; E=4e-07 COG: DR0821_2; COG0657 Acetyl esterase; E=2e-17 DR0415; COG2272 Carboxylesterase type B; E=0.002 VCA0490; COG0657 Acetyl esterase; E=0.005 PFAM: PF00326; Prolyl oligopeptidase; E=0.00023 PF00135; Carboxylesterase; E=2.4e-05; lipase complement(4223603..4224445) Rhodopirellula baltica SH 1 1792242 NP_868092.1 CDS RB7909 NC_005027.1 4224502 4225494 R signal peptide complement(4224502..4225494) Rhodopirellula baltica SH 1 1790909 NP_868093.1 CDS RB7911 NC_005027.1 4225623 4226849 R best DB hits: BLAST: pir:T35287; probable secreted proteinase - Streptomyces coelicolor; E=3e-10 gb:AAK02818.1; (AE006110) HtrA [Pasteurella multocida]; E=2e-08 pir:S47170; hypothetical protein 34K - Mycobacterium; E=3e-08 COG: VNG0226G; COG0265 Trypsin-like serine proteases, typically; E=9e-09 htrA; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=2e-08 aq_1450; COG0265 Trypsin-like serine proteases, typically; E=5e-08 PFAM: PF00089; Trypsin; E=0.038; secreted proteinase complement(4225623..4226849) Rhodopirellula baltica SH 1 1796324 NP_868094.1 CDS RB7912 NC_005027.1 4226932 4227861 R best DB hits: PFAM: PF02236; Viral DNA-binding protein; E=0.73; signal peptide complement(4226932..4227861) Rhodopirellula baltica SH 1 1791426 NP_868095.1 CDS RB7914 NC_005027.1 4227877 4228476 R signal peptide complement(4227877..4228476) Rhodopirellula baltica SH 1 1797198 NP_868096.1 CDS RB7913 NC_005027.1 4227877 4228083 R hypothetical protein complement(4227877..4228083) Rhodopirellula baltica SH 1 1796272 NP_868097.1 CDS RB7915 NC_005027.1 4228108 4228539 D signal peptide 4228108..4228539 Rhodopirellula baltica SH 1 1794718 NP_868098.1 CDS RB7916 NC_005027.1 4228608 4229396 D hypothetical protein 4228608..4229396 Rhodopirellula baltica SH 1 1792606 NP_868099.1 CDS ppkA NC_005027.1 4229437 4231818 R PMID: 7883195 best DB hits: BLAST: gb:AAD03499.2; (AF035395) serinethreonine protein kinase PpkA; E=6e-16 pir:D83637; serinethreonine protein kinase PpkA PA0074 [imported] -; E=1e-15 pir:T36502; serinethreonine protein kinase - Streptomyces; E=2e-11 COG: PA0074; COG0515 Serine/threonine protein kinases; E=1e-16 PFAM: PF00069; Protein kinase domain; E=1e-08; serine/threonine protein kinase PpkA complement(4229437..4231818) Rhodopirellula baltica SH 1 1792200 NP_868100.1 CDS sig NC_005027.1 4231813 4232499 D PMID: 20372644 best DB hits: BLAST: ddbj:BAB08177.1; (AB039273) ECF sigma factor AdsA [Streptomyces; E=2e-05 pir:T36271; probable RNA polymerase sigma factor - Streptomyces; E=2e-04 embl:CAB55345.1; (AJ010584) ECF sigma factor [Streptomyces; E=2e-04 COG: Rv3414c; COG1595 DNA-directed RNA polymerase specialized sigma; E=3e-05 TM0902; COG1191 DNA-directed RNA polymerase specialized sigma; E=3e-04 BS_sigH; COG1595 DNA-directed RNA polymerase specialized sigma; E=0.008 PFAM: PF00140; Sigma-70 factor; E=3.2e-05; ECF sigma factor AdsA 4231813..4232499 Rhodopirellula baltica SH 1 1791332 NP_868101.1 CDS RB7926 NC_005027.1 4232595 4233323 D best DB hits: PFAM: PF00009; Elongation factor Tu family; E=0.29; hypothetical protein 4232595..4233323 Rhodopirellula baltica SH 1 1790594 NP_868102.1 CDS pknB NC_005027.1 4233448 4236582 D PMID: 99426839 best DB hits: BLAST: embl:CAA10713.1; (AJ132604) hypothetical protein [Lactococcus; E=1e-38 gb:AAK05985.1; AE006418_5 (AE006418) serinethreonine protein; E=8e-38 gb:AAD42851.1; AF159689_3 (AF159689) serinethreonine kinase PKN3; E=2e-37 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=3e-38 PFAM: PF01610; Transposase; E=0.64 PF00069; Protein kinase domain; E=7.4e-61; serine/threonine protein kinase 4233448..4236582 Rhodopirellula baltica SH 1 1795874 NP_868103.1 CDS RB7929 NC_005027.1 4236583 4236810 D hypothetical protein 4236583..4236810 Rhodopirellula baltica SH 1 1792599 NP_868104.1 CDS RB7931 NC_005027.1 4236807 4237280 D hypothetical protein 4236807..4237280 Rhodopirellula baltica SH 1 1793576 NP_868105.1 CDS RB7935 NC_005027.1 4237340 4237720 R signal peptide complement(4237340..4237720) Rhodopirellula baltica SH 1 1791026 NP_868106.1 CDS RB7937 NC_005027.1 4237684 4237809 R hypothetical protein complement(4237684..4237809) Rhodopirellula baltica SH 1 1790890 NP_868107.1 CDS RB7938 NC_005027.1 4237919 4238386 R hypothetical protein complement(4237919..4238386) Rhodopirellula baltica SH 1 1796694 NP_868108.1 CDS RB7939 NC_005027.1 4238296 4238613 D hypothetical protein 4238296..4238613 Rhodopirellula baltica SH 1 1795798 NP_868109.1 CDS dcp NC_005027.1 4238703 4240943 R PMID: 1537804 best DB hits: BLAST: swissprot:P27236; DCP_SALTY PEPTIDYL-DIPEPTIDASE DCP (DIPEPTIDYL; E=1e-109 pir:E82620; peptidyl-dipeptidase XF1944 [imported] - Xylella; E=1e-107 gb:AAG56224.1; AE005351_3 (AE005351) dipeptidyl carboxypeptidase; E=1e-106 COG: XF1944; COG0339 Zn-dependent oligopeptidases; E=1e-108 PFAM: PF01432; Peptidase M3; E=1.9e-122; peptidyl-dipeptidase DCP complement(4238703..4240943) Rhodopirellula baltica SH 1 1792875 NP_868110.1 CDS cysN NC_005027.1 4240892 4242835 R in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from EScherichia coli involved in cysteine biosynthesis; bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase complement(4240892..4242835) Rhodopirellula baltica SH 1 1791533 NP_868111.1 CDS cysD NC_005027.1 4242979 4243890 R with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 complement(4242979..4243890) Rhodopirellula baltica SH 1 1792402 NP_868112.1 CDS gidB NC_005027.1 4243996 4244691 R PMID: 98295987 PMID: 9634230 best DB hits: BLAST: swissprot:O53597; GIDB_MYCTU GLUCOSE INHIBITED DIVISION PROTEIN B; E=2e-15 swissprot:Q50203; GIDB_MYCLE GLUCOSE INHIBITED DIVISION PROTEIN B; E=9e-15 pir:C82950; glucose inhibited division protein B PA5564 [imported] -; E=1e-14 COG: Rv3919c; COG0357 Predicted S-adenosylmethionine-dependent; E=2e-16 PFAM: PF02527; Glucose inhibited division protein; E=1.5e-26; glucose inhibited division protein B (GidB) complement(4243996..4244691) Rhodopirellula baltica SH 1 1792870 NP_868113.1 CDS RB7947 NC_005027.1 4244889 4246172 R PMID: 9083067 PMID: 97238870 best DB hits: BLAST: gb:AAF26789.1; AC016829_13 (AC016829) O-linked GlcNAc; E=2e-09 gb:AAA62535.1; (U21320) contains TPR domain-like repeats; E=2e-08 gb:AAB63465.1; (U77412) O-linked GlcNAc transferase; E=2e-08 COG: sll0886; COG0457 TPR-repeat-containing proteins; E=2e-07 PFAM: PF00515; TPR Domain; E=0.025; O-linked GlcNAc transferase complement(4244889..4246172) Rhodopirellula baltica SH 1 1794359 NP_868114.1 CDS RB7950 NC_005027.1 4246162 4246314 D best DB hits: PFAM: PF02522; Aminoglycoside 3-N-acetyltrans; E=0.66; hypothetical protein 4246162..4246314 Rhodopirellula baltica SH 1 1795134 NP_868115.1 CDS RB7951 NC_005027.1 4246311 4246565 D hypothetical protein 4246311..4246565 Rhodopirellula baltica SH 1 1796241 NP_868116.1 CDS RB7955 NC_005027.1 4246743 4247114 R hypothetical protein complement(4246743..4247114) Rhodopirellula baltica SH 1 1795528 NP_868117.1 CDS topA NC_005027.1 4247111 4249921 R PMID: 8921893 best DB hits: BLAST: swissprot:Q9X909; TOP1_STRCO DNA TOPOISOMERASE I (OMEGA-PROTEIN); E=0.0 pir:G75403; DNA topoisomerase I - Deinococcus radiodurans (strain; E=0.0 swissprot:Q59567; TOP1_MYCTU DNA TOPOISOMERASE I (OMEGA-PROTEIN); E=0.0 COG: DR1374_1; COG0550 Topoisomerase IA; E=1e-170 PFAM: PF01751; Toprim domain; E=3.1e-39 PF01131; DNA topoisomerase; E=4e-164; DNA topoisomerase I complement(4247111..4249921) Rhodopirellula baltica SH 1 1796543 NP_868118.1 CDS uvrA NC_005027.1 4249943 4256578 R PMID: 8675016 best DB hits: BLAST: swissprot:P94972; UVRA_MYCTU EXCINUCLEASE ABC SUBUNIT A -----; E=0.0 swissprot:Q56242; UVRA_THETH EXCINUCLEASE ABC SUBUNIT A -----; E=0.0 swissprot:Q9Z507; UVRA_STRCO EXCINUCLEASE ABC SUBUNIT A -----; E=0.0 COG: Rv1638; COG0178 Excinuclease ATPase subunit; E=0.0 PFAM: PF00005; ABC transporter; E=0.033 PF01583; Adenylylsulfate kinase; E=0.026 PF00005; ABC transporter; E=5e-12; exinuclease ABC subunit A complement(4249943..4256578) Rhodopirellula baltica SH 1 1795769 NP_868119.1 CDS yacI NC_005027.1 4256632 4257723 R PMID: 7819288 PMID: 9671698 best DB hits: BLAST: ddbj:BAB03821.1; (AP001507) creatine kinase [Bacillus halodurans]; E=1e-66 swissprot:P37570; YACI_BACSU HYPOTHETICAL 41.1 KD PROTEIN IN; E=2e-65 gb:AAC44445.1; (U40604) ORF3; 39 kDa protein [Listeria; E=8e-56 PFAM: PF00217; ATP:guanido phosphotransferase; E=0.0053; ATP:guanido phosphotransferase complement(4256632..4257723) Rhodopirellula baltica SH 1 1794846 NP_868120.1 CDS yacH NC_005027.1 4257720 4258241 R best DB hits: BLAST: ddbj:BAA90847.1; (AB031211) YacH [Bacillus halodurans] -----; E=2e-08 swissprot:P37569; YACH_BACSU HYPOTHETICAL 21.0 KD PROTEIN IN; E=5e-08 gb:AAC44444.1; (U40604) ORF2; 19 kDa protein [Listeria; E=2e-05 PFAM: PF02151; UvrB/uvrC motif; E=4.7e-08; hypothetical protein complement(4257720..4258241) Rhodopirellula baltica SH 1 1791849 NP_868121.1 CDS RB7965 NC_005027.1 4258303 4258464 D hypothetical protein 4258303..4258464 Rhodopirellula baltica SH 1 1794141 NP_868122.1 CDS trpE NC_005027.1 4258474 4260117 D PMID: 2732211 best DB hits: BLAST: swissprot:P14953; TRPE_CLOTM ANTHRANILATE SYNTHASE COMPONENT I; E=1e-112 swissprot:P21689; TRPE_PSESS ANTHRANILATE SYNTHASE COMPONENT I; E=1e-104 pir:A39128; anthranilate synthase (EC 4.1.3.27) component I; E=1e-104 COG: PA0609; COG0147 Anthranilate/para-aminobenzoate synthases component; E=1e-103 VNG0384G; COG0147 Anthranilate/para-aminobenzoate synthases; E=2e-66 VC1174; COG0147 Anthranilate/para-aminobenzoate synthases component; E=1e-64 PFAM: PF00425; chorismate binding enzyme; E=2e-166; anthranilate synthase component I 4258474..4260117 Rhodopirellula baltica SH 1 1791269 NP_868123.1 CDS RB7970 NC_005027.1 4260248 4260739 D best DB hits: BLAST: pir:F64973; hypothetical protein b2071 - Escherichia coli (strain; E=1e-08 pir:D81118; conserved hypothetical protein ankyrin-related protein; E=8e-08 pir:C81903; hypothetical protein NMA1343 [imported] - Neisseria; E=1e-04; hypothetical protein 4260248..4260739 Rhodopirellula baltica SH 1 1797199 NP_868124.1 CDS cycA NC_005027.1 4261285 4265451 R PMID: 97428333 PMID: 2986626 PMID: 9281430 PMID: 11152119 best DB hits: BLAST: pir:A83363; probable cytochrome c precursor PA2266 [imported] -; E=5e-09 pir:E83075; probable cytochrome c PA4571 [imported] - Pseudomonas; E=7e-07 pir:CCTW5T; cytochrome c552 [validated] - Thermus aquaticus; E=9e-07 COG: PA2266; COG2010 Cytochrome c, mono- and diheme variants; E=5e-10 PFAM: PF00034; Cytochrome c; E=0.042; cytochrome c precursor complement(4261285..4265451) Rhodopirellula baltica SH 1 1797209 NP_868125.1 CDS RB7978 NC_005027.1 4265473 4265817 D hypothetical protein 4265473..4265817 Rhodopirellula baltica SH 1 1790680 NP_868126.1 CDS RB7980 NC_005027.1 4265869 4266462 D hypothetical protein 4265869..4266462 Rhodopirellula baltica SH 1 1791224 NP_868127.1 CDS RB7983 NC_005027.1 4266520 4267023 R hypothetical protein complement(4266520..4267023) Rhodopirellula baltica SH 1 1797184 NP_868128.1 CDS RB7984 NC_005027.1 4267183 4267290 D hypothetical protein 4267183..4267290 Rhodopirellula baltica SH 1 1789915 NP_868129.1 CDS ansA NC_005027.1 4267280 4268695 D PMID: 1391778 best DB hits: BLAST: swissprot:P30364; ASPG_LUPAN L-ASPARAGINASE (L-ASPARAGINE; E=3e-62 swissprot:Q9ZSD6; ASPG_LUPLU L-ASPARAGINASE (L-ASPARAGINE; E=3e-62 swissprot:P50288; ASPG_LUPAL L-ASPARAGINASE (L-ASPARAGINE; E=5e-62 COG: ybiK; COG1446 Asparaginase; E=2e-56 PFAM: PF02530; Porin subfamily; E=0.047 PF01112; Asparaginase; E=1.9e-57; L-asparaginase 4267280..4268695 Rhodopirellula baltica SH 1 1795703 NP_868130.1 CDS RB7987 NC_005027.1 4268647 4269756 D hypothetical protein 4268647..4269756 Rhodopirellula baltica SH 1 1795175 NP_868131.1 CDS RB7989 NC_005027.1 4269708 4271909 D hypothetical protein 4269708..4271909 Rhodopirellula baltica SH 1 1796714 NP_868132.1 CDS RB7991 NC_005027.1 4271954 4273435 D PMID: 11743194; signal peptide 4271954..4273435 Rhodopirellula baltica SH 1 1796421 NP_868133.1 CDS arsA NC_005027.1 4273470 4275440 R PMID: 20164110 PMID: 7910580 PMID: 1572648 best DB hits: BLAST: pir:E64903; arylsulfatase homolog b1498 - Escherichia coli -----; E=2e-39 swissprot:P77318; YDEN_ECOLI SULFATASE YDEN PRECURSOR; E=2e-39 gb:AAG56270.1; AE005355_4 (AE005355) sulfatase; E=2e-39 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=2e-40 PFAM: PF00884; Sulfatase; E=1.1e-59; arylsulfatase complement(4273470..4275440) Rhodopirellula baltica SH 1 1789941 NP_868134.1 CDS RB7998 NC_005027.1 4275399 4276436 D hypothetical protein 4275399..4276436 Rhodopirellula baltica SH 1 1793123 NP_868135.1 CDS RB7999 NC_005027.1 4276441 4277514 D best DB hits: PFAM: PF00573; Ribosomal protein L4/L1 family; E=0.0042; hypothetical protein 4276441..4277514 Rhodopirellula baltica SH 1 1791069 NP_868136.1 CDS RB8001 NC_005027.1 4276849 4277541 R signal peptide complement(4276849..4277541) Rhodopirellula baltica SH 1 1791465 NP_868137.1 CDS GALNS NC_005027.1 4277579 4279036 D PMID: 8020961 PMID: 1755850 PMID: 8001980 PMID: 1522213 best DB hits: BLAST: gb:AAF49287.1; (AE003522) CG7402 gene product [Drosophila; E=2e-38 gb:AAF49302.1; (AE003522) CG5584 gene product [Drosophila; E=2e-37 ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=2e-35 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=2e-31 PFAM: PF00884; Sulfatase; E=2.4e-44; N-acetylgalactosamine 6-sulfate sulfatase (GALNS) 4277579..4279036 Rhodopirellula baltica SH 1 1791361 NP_868138.1 CDS RB8008 NC_005027.1 4279356 4280558 D PMID: hofG PMID: hopG best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; general secretion pathway protein G 4279356..4280558 Rhodopirellula baltica SH 1 1795165 NP_868139.1 CDS RB8010 NC_005027.1 4280574 4280861 D signal peptide 4280574..4280861 Rhodopirellula baltica SH 1 1797210 NP_868140.1 CDS RB8011 NC_005027.1 4281114 4282298 R hypothetical protein complement(4281114..4282298) Rhodopirellula baltica SH 1 1791882 NP_868141.1 CDS RB8012 NC_005027.1 4282280 4282669 R hypothetical protein complement(4282280..4282669) Rhodopirellula baltica SH 1 1796125 NP_868142.1 CDS RB8014 NC_005027.1 4282620 4282802 R hypothetical protein complement(4282620..4282802) Rhodopirellula baltica SH 1 1795249 NP_868143.1 CDS ncx NC_005027.1 4282805 4284103 D PMID: 11294880 best DB hits: BLAST: gb:AAG12988.1; AF169257_1 (AF169257) sodiumcalcium exchanger; E=4e-08 ref:XP_009649.1; sodium calcium exchanger [Homo sapiens]; E=4e-08 gb:AAG60049.1; AF314821_1 (AF314821) K+-dependent NaCa exchanger; E=4e-08 COG: MTH1155; COG0530 Ca2+/Na+ antiporter; E=0.002 PFAM: PF01699; Sodium/calcium exchanger protei; E=4.9e-05; sodium/calcium exchanger antiporter 4282805..4284103 Rhodopirellula baltica SH 1 1797205 NP_868144.1 CDS RB8018 NC_005027.1 4284304 4286895 D hypothetical protein 4284304..4286895 Rhodopirellula baltica SH 1 1796888 NP_868145.1 CDS RB8019 NC_005027.1 4284682 4285233 R PMID: 98295987 best DB hits: BLAST: pir:A70985; probable polyketide synthase - Mycobacterium; E=0.69; polyketide synthase complement(4284682..4285233) Rhodopirellula baltica SH 1 1792545 NP_868146.1 CDS RB8022 NC_005027.1 4286892 4288223 D signal peptide 4286892..4288223 Rhodopirellula baltica SH 1 1790387 NP_868147.1 CDS RB8026 NC_005027.1 4288220 4289278 D best DB hits: BLAST: pir:E82768; conserved hypothetical protein XF0752 [imported] -; E=4e-30 pir:A82381; conserved hypothetical protein VCA1077 [imported] -; E=1e-26 gb:AAF47337.1; (AE003467) CG7049 gene product [Drosophila; E=5e-19 COG: XF0752_2; COG1262 Uncharacterized BCR; E=9e-30; hypothetical protein 4288220..4289278 Rhodopirellula baltica SH 1 1790608 NP_868148.1 CDS RB8027 NC_005027.1 4289305 4290003 D hypothetical protein 4289305..4290003 Rhodopirellula baltica SH 1 1796078 NP_868149.1 CDS pknB NC_005027.1 4289867 4291702 D PMID: 99426839 best DB hits: BLAST: gb:AAF80365.1; AF159160_1 (AF159160) serinethreonine kinase Pkn10; E=6e-50 swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=3e-46 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=7e-44 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=7e-45 PFAM: PF00069; Protein kinase domain; E=1.6e-64; serine/threonine kinase Pkn10 4289867..4291702 Rhodopirellula baltica SH 1 1797208 NP_868150.1 CDS fabG NC_005027.1 4291888 4292625 R catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(4291888..4292625) Rhodopirellula baltica SH 1 1796735 NP_868151.1 CDS GALNS NC_005027.1 4292674 4294116 D PMID: 1755850 PMID: 8001980 PMID: 1522213 PMID: 7668283 PMID: 7795586 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=4e-24 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=4e-23 gb:AAF58475.1; (AE003821) CG8646 gene product [Drosophila; E=1e-22 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=1e-14 PFAM: PF00884; Sulfatase; E=9.4e-37; N-acetylgalactosamine 6-sulfate sulfatase (GALNS) 4292674..4294116 Rhodopirellula baltica SH 1 1794975 NP_868152.1 CDS ybhE NC_005027.1 4294183 4295373 R best DB hits: BLAST: swissprot:O34499; YKGB_BACSU HYPOTHETICAL 38.4 KDA PROTEIN IN; E=1e-43 embl:CAB66198.1; (AL136502) hypothetical protein SCF43.09.; E=1e-31 embl:CAC13069.1; (AL445503) secreted protein; E=6e-31 COG: BS_ykgB; COG2706 3-carboxymuconate cyclase; E=1e-44; 3-carboxymuconate cyclase complement(4294183..4295373) Rhodopirellula baltica SH 1 1794498 NP_868153.1 CDS RB8034 NC_005027.1 4295344 4295787 D hypothetical protein 4295344..4295787 Rhodopirellula baltica SH 1 1792418 NP_868154.1 CDS trkA NC_005027.1 4295792 4297138 D involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane component 4295792..4297138 Rhodopirellula baltica SH 1 1796331 NP_868155.1 CDS serB NC_005027.1 4296997 4298454 D PMID: 2997734 best DB hits: BLAST: pir:C83025; probable phosphoserine phosphatase PA4960 [imported] -; E=1e-108 pir:E70860; probable serB2 protein - Mycobacterium tuberculosis; E=1e-60 pir:T36772; probable phosphoserine phosphatase - Streptomyces; E=1e-57 COG: PA4960_2; COG0560 Phosphoserine phosphatase; E=5e-70 PA4960_1; COG2716 ACT domain-containing protein; E=3e-31 jhp0597; COG0560 Phosphoserine phosphatase; E=6e-26 PFAM: PF01842; ACT domain; E=0.052 PF00702; haloacid dehalogenase-like hy; E=3.6e-26; phosphoserine phosphatase 4296997..4298454 Rhodopirellula baltica SH 1 1797162 NP_868156.1 CDS OPLAH NC_005027.1 4298294 4302439 D PMID: 8943290 best DB hits: BLAST: pir:E70627; hypothetical protein Rv0266c - Mycobacterium tuberculosis; E=0.0 pir:S77037; hypothetical protein slr0697 - Synechocystis sp. (strain; E=0.0 swissprot:P97608; OPLA_RAT 5-OXOPROLINASE (5-OXO-L-PROLINASE); E=1e-153 COG: Rv0266c_1; COG0145 N-methylhydaintoinase A; E=2e-99 slr0697_2; COG0146 N-methylhydaintoinase B; E=9e-85 YKL215c_1; COG0145 N-methylhydaintoinase A; E=6e-73 PFAM: PF01968; Hydantoinase/oxoprolinase; E=0.00018 PF02538; Hydantoinase B/oxoprolinase; E=1.7e-167; 5-oxoprolinase 4298294..4302439 Rhodopirellula baltica SH 1 1790060 NP_868157.1 CDS RB8039 NC_005027.1 4302446 4307233 R best DB hits: PFAM: PF01011; PQQ enzyme repeat; E=0.48 PF00515; TPR Domain; E=0.0026 PF01011; PQQ enzyme repeat; E=0.16; oxidoreductase complement(4302446..4307233) Rhodopirellula baltica SH 1 1791994 NP_868158.1 CDS devC NC_005027.1 4307428 4308630 R PMID: 98230330 best DB hits: BLAST: embl:CAA67986.1; (X99672) devC [Anabaena sp.]; E=2e-57 embl:CAA05976.1; (AJ003195) membrane spanning subunit [Anabaena; E=7e-57 pir:S76812; hypothetical protein - Synechocystis sp. (strain PCC; E=4e-53 COG: Rv0072; COG0577 Predicted permease; E=0.008 PFAM: PF02687; Predicted permease; E=5.7e-12; exporter subunit devC- ABC transporter family protein complement(4307428..4308630) Rhodopirellula baltica SH 1 1792663 NP_868159.1 CDS nrdR NC_005027.1 4308630 4309100 R PMID: 1406588 best DB hits: BLAST: pir:G82098; conserved hypothetical protein VC2272 [imported] -; E=4e-30 swissprot:P25538; YBAD_ECOLI HYPOTHETICAL 17.2 KD PROTEIN IN; E=2e-28 pir:E72221; conserved hypothetical protein - Thermotoga maritima; E=4e-28 COG: VC2272; COG1327 Predicted transcriptional regulator, consists of a; E=4e-31 PFAM: PF02644; Uncharacterized BCR, COG1327; E=5.2e-62; NrdR family transcriptional regulator complement(4308630..4309100) Rhodopirellula baltica SH 1 1796497 NP_868160.1 CDS RB8050 NC_005027.1 4309175 4309393 R hypothetical protein complement(4309175..4309393) Rhodopirellula baltica SH 1 1791691 NP_868161.1 CDS RB8052 NC_005027.1 4309427 4310107 D PMID: 98295987 best DB hits: BLAST: pir:G70979; hypothetical protein Rv3278c - Mycobacterium; E=0.59 PFAM: PF01944; Integral membrane protein DUF95; E=0.0077; hypothetical protein 4309427..4310107 Rhodopirellula baltica SH 1 1790362 NP_868162.1 CDS RB8054 NC_005027.1 4310110 4310499 D PMID: 2509712 best DB hits: BLAST: swissprot:P18746; ZO26_XENLA OOCYTE ZINC FINGER PROTEIN XLCOF26; E=0.84; hypothetical protein 4310110..4310499 Rhodopirellula baltica SH 1 1797196 NP_868163.1 CDS RB8055 NC_005027.1 4310613 4311851 R signal peptide complement(4310613..4311851) Rhodopirellula baltica SH 1 1790309 NP_868164.1 CDS RB8056 NC_005027.1 4311931 4313712 R hypothetical protein complement(4311931..4313712) Rhodopirellula baltica SH 1 1793629 NP_868165.1 CDS RB8059 NC_005027.1 4313654 4314058 D hypothetical protein 4313654..4314058 Rhodopirellula baltica SH 1 1792405 NP_868166.1 CDS spoU NC_005027.1 4314080 4314925 R PMID: 7590303 PMID: 2987648 best DB hits: BLAST: gb:AAF73591.1; (AE002337) spoU rRNA methylase; E=2e-27 pir:C72066; rRNA methylase - Chlamydophila pneumoniae (strain; E=5e-27 pir:A75448; rRNA methylase - Deinococcus radiodurans (strain R1); E=2e-26 COG: CPn0530; COG0566 rRNA methylases; E=5e-28 PFAM: PF00588; SpoU rRNA Methylase; E=4.7e-24; spoU rRNA methylase complement(4314080..4314925) Rhodopirellula baltica SH 1 1791677 NP_868167.1 CDS RB8061 NC_005027.1 4314897 4316168 D PMID: 97426617 best DB hits: BLAST: pir:C65084; hypothetical protein b2981 - Escherichia coli (strain; E=9e-35; hypothetical protein 4314897..4316168 Rhodopirellula baltica SH 1 1791773 NP_868168.1 CDS yoaA NC_005027.1 4316165 4318267 D PMID: 92332449 best DB hits: BLAST: pir:E82133; ATP-dependent helicase, DinG family VC1990 [imported] -; E=4e-87 swissprot:P76257; YOAA_ECOLI PROBABLE ATP-DEPENDENT HELICASE YOAA; E=2e-84 gb:AAG56797.1; AE005403_8 (AE005403) enzyme [Escherichia; E=5e-84 COG: VC1990; COG1199 Rad3-related DNA helicases; E=4e-88 PFAM: PF00270; DEAD/DEAH box helicase; E=0.00011 PF00271; Helicase conserved C-terminal; E=0.5; ATP-dependent helicase DinG 4316165..4318267 Rhodopirellula baltica SH 1 1795953 NP_868169.1 CDS RB8064 NC_005027.1 4318222 4318440 R hypothetical protein complement(4318222..4318440) Rhodopirellula baltica SH 1 1796665 NP_868170.1 CDS RB8065 NC_005027.1 4318424 4318540 R hypothetical protein complement(4318424..4318540) Rhodopirellula baltica SH 1 1796218 NP_868171.1 CDS RB8066 NC_005027.1 4318519 4318635 R hypothetical protein complement(4318519..4318635) Rhodopirellula baltica SH 1 1796175 NP_868172.1 CDS RB8067 NC_005027.1 4318645 4318842 R hypothetical protein complement(4318645..4318842) Rhodopirellula baltica SH 1 1791203 NP_868173.1 CDS RB8068 NC_005027.1 4318894 4319541 D signal peptide 4318894..4319541 Rhodopirellula baltica SH 1 1794754 NP_868174.1 CDS RB8070 NC_005027.1 4319538 4319717 D hypothetical protein 4319538..4319717 Rhodopirellula baltica SH 1 1794102 NP_868175.1 CDS RB8071 NC_005027.1 4319838 4322033 D PMID: 2808524 PMID: 8276898 PMID: 2497103 best DB hits: BLAST: swissprot:P13395; SPCA_DROME SPECTRIN ALPHA CHAIN ----- pir:; E=0.46 gb:AAF47569.1; (AE003472) alpha-Spec gene product [alt 2]; E=0.46; spectrin alpha chain 4319838..4322033 Rhodopirellula baltica SH 1 1790323 NP_868176.1 CDS abf2 NC_005027.1 4322176 4323276 D PMID: 20125575 best DB hits: BLAST: ddbj:BAB05586.1; (AP001513) BH1867~unknown conserved protein; E=1e-23 pir:B59296; alpha-L-arabinofuranosidase II [validated] -; E=6e-19 embl:CAB89837.1; (AJ242516) hypothetical protein [Salmonella; E=1e-18; alpha-L-arabinofuranosidase 4322176..4323276 Rhodopirellula baltica SH 1 1790665 NP_868177.1 CDS RB8076 NC_005027.1 4323454 4323975 D PMID: 11466286 best DB hits: BLAST: embl:CAB93380.1; (AL357523) hypothetical protein [Streptomyces; E=1e-12 swissprot:Q52673; YQGF_RHOCA HYPOTHETICAL 17.1 KDA PROTEIN -----; E=4e-12 swissprot:Q9ZDJ8; Y330_RICPR HYPOTHETICAL PROTEIN RP330 -----; E=2e-11 COG: RP330; COG0816 Predicted endonuclease involved in recombination; E=2e-12; an endonuclease 4323454..4323975 Rhodopirellula baltica SH 1 1791550 NP_868178.1 CDS RB8077 NC_005027.1 4324046 4325737 D signal peptide 4324046..4325737 Rhodopirellula baltica SH 1 1791996 NP_868179.1 CDS arsA NC_005027.1 4325750 4327261 D PMID: 7910580 PMID: 1572648 best DB hits: BLAST: swissprot:P50428; ARSA_MOUSE ARYLSULFATASE A PRECURSOR (ASA); E=1e-56 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=4e-55 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=4e-55 COG: aslA; COG3119 Arylsulfatase A and related enzymes; E=2e-31 PFAM: PF00884; Sulfatase; E=1.6e-47; arylsulfatase 4325750..4327261 Rhodopirellula baltica SH 1 1790876 NP_868180.1 CDS RB8079 NC_005027.1 4327230 4327388 R hypothetical protein complement(4327230..4327388) Rhodopirellula baltica SH 1 1790912 NP_868181.1 CDS hisA NC_005027.1 4327385 4328146 R PMID: 2664449 best DB hits: BLAST: swissprot:P74561; HIS4_SYNY3; E=3e-56 pir:A83003; phosphoribosylformimino-5-aminoimidazole carboxamide; E=5e-49 gb:AAF05093.1; AF150930_2 (AF150930) phosphoribosyl; E=2e-46 COG: slr0652; COG0106 Phosphoribosylformimino-5-aminoimidazole; E=3e-57 PA5141; COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide; E=5e-50 NMB0629; COG0106 Phosphoribosylformimino-5-aminoimidazole; E=6e-44 PFAM: PF00977; Histidine biosynthesis protein; E=4.7e-70; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase complement(4327385..4328146) Rhodopirellula baltica SH 1 1792914 NP_868182.1 CDS RB8082 NC_005027.1 4328116 4329816 D best DB hits: BLAST: pir:S75597; hypothetical protein slr1343 - Synechocystis sp. (strain; E=6e-94 gb:AAG19190.1; (AE005016) Vng0705c [Halobacterium sp. NRC-1]; E=2e-91 pir:G82413; conserved hypothetical protein VCA0809 [imported] -; E=2e-83 COG: slr1343; COG3046 Deoxyribodipyrimidine photolyase-related proteins; E=6e-95; a deoxyribodipyrimidine photolyase-like protein 4328116..4329816 Rhodopirellula baltica SH 1 1790843 NP_868183.1 CDS RB8084 NC_005027.1 4329890 4330006 R hypothetical protein complement(4329890..4330006) Rhodopirellula baltica SH 1 1796435 NP_868184.1 CDS RB8085 NC_005027.1 4330030 4331517 D PMID: 11705915 best DB hits: BLAST: gb:AAG31169.1; (AF314961) unknown [Salmonella typhimurium]; E=0.70 PFAM: PF01011; PQQ enzyme repeat; E=0.017; PQQ repeat-containing protein 4330030..4331517 Rhodopirellula baltica SH 1 1790607 NP_868185.1 CDS RB8089 NC_005027.1 4331518 4332285 R signal peptide complement(4331518..4332285) Rhodopirellula baltica SH 1 1791032 NP_868186.1 CDS RB8091 NC_005027.1 4332254 4334476 R PMID: 20039618 best DB hits: BLAST: ddbj:BAA86452.1; (AB032964) KIAA1138 protein [Homo sapiens]; E=0.74; hypothetical protein complement(4332254..4334476) Rhodopirellula baltica SH 1 1796070 NP_868187.1 CDS RB8093 NC_005027.1 4334451 4335641 R signal peptide complement(4334451..4335641) Rhodopirellula baltica SH 1 1796319 NP_868188.1 CDS RB8095 NC_005027.1 4335638 4335838 R hypothetical protein complement(4335638..4335838) Rhodopirellula baltica SH 1 1792600 NP_868189.1 CDS RB8096 NC_005027.1 4335851 4337122 R best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.86; signal peptide complement(4335851..4337122) Rhodopirellula baltica SH 1 1793938 NP_868190.1 CDS RB8098 NC_005027.1 4337119 4337334 R hypothetical protein complement(4337119..4337334) Rhodopirellula baltica SH 1 1796539 NP_868191.1 CDS RB8100 NC_005027.1 4337464 4337715 D hypothetical protein 4337464..4337715 Rhodopirellula baltica SH 1 1791354 NP_868192.1 CDS RB8101 NC_005027.1 4337684 4337875 D hypothetical protein 4337684..4337875 Rhodopirellula baltica SH 1 1792955 NP_868193.1 CDS RB8102 NC_005027.1 4337885 4339048 R PMID: 1588814 PMID: 1309616 best DB hits: BLAST: pir:E83258; general secretion pathway protein G PA3101 [imported]; E=0.063 gb:AAC83358.1; (AF092918) outer membrane secretion protein T; E=0.069 gb:AAC79845.1; (AF089753) cellulose-binding protein CbpC; E=0.24 COG: PA3101; COG2165 General secretory pathway proteins G and H and; E=0.006 PFAM: PF02361; Cobalt transport protein; E=0.11 PF00114; Pilin (bacterial filament); E=0.011; general secretion pathway protein G complement(4337885..4339048) Rhodopirellula baltica SH 1 1796493 NP_868194.1 CDS RB8103 NC_005027.1 4338942 4339313 D hypothetical protein 4338942..4339313 Rhodopirellula baltica SH 1 1794762 NP_868195.1 CDS RB8107 NC_005027.1 4339329 4340276 D hypothetical protein 4339329..4340276 Rhodopirellula baltica SH 1 1790221 NP_868196.1 CDS RB8108 NC_005027.1 4340324 4343143 R hypothetical protein complement(4340324..4343143) Rhodopirellula baltica SH 1 1794016 NP_868197.1 CDS RB8113 NC_005027.1 4343127 4344044 R PMID: 1924314 PMID: 8088782 best DB hits: BLAST: pir:T36523; probable ABC-type transport system ATP-binding protein -; E=4e-37 pir:C72303; ABC transporter ATP-binding protein - Thermotoga; E=6e-34 gb:AAF81232.1; (AF263012) ABC transporter ATP binding protein; E=9e-33 COG: TM1028; COG1131 ABC-type multidrug transport system, ATPase; E=5e-35 PFAM: PF00005; ABC transporter; E=5e-43; ABC transporter ATP-binding protein complement(4343127..4344044) Rhodopirellula baltica SH 1 1796403 NP_868198.1 CDS gntR NC_005027.1 4344172 4344669 R best DB hits: BLAST: pir:G69999; transcriptional regulator GntR related protein ytrA -; E=4e-13 pir:D72336; transcriptional regulator, GntR family - Thermotoga; E=9e-13 gb:AAC62421.1; (AF084104) hypothetical protein [Bacillus firmus]; E=1e-08 COG: BS_ytrA; COG1725 Predicted transcriptional regulators; E=4e-14 BH1940; COG1167 Transcriptional regulators containing a; E=3e-06 BH1164; COG1725 Predicted transcriptional regulators; E=5e-06 PFAM: PF00392; Bacterial regulatory proteins, gntR; E=0.0001; GntR family transcriptional regulator complement(4344172..4344669) Rhodopirellula baltica SH 1 1793939 NP_868199.1 CDS RB8117 NC_005027.1 4344626 4346503 D best DB hits: BLAST: ddbj:BAB06996.1; (AP001518) spore cortex protein [Bacillus; E=0.022 COG: BH3277; COG2244 Membrane protein involved in the export of O-antigen; E=0.002 PFAM: PF01943; Polysaccharide biosynthesis pro; E=0.05; spore cortex protein- membrane protein involved in the export of O-antigen and teichoic acid 4344626..4346503 Rhodopirellula baltica SH 1 1795362 NP_868200.1 CDS RB8119 NC_005027.1 4346427 4346855 D hypothetical protein 4346427..4346855 Rhodopirellula baltica SH 1 1796399 NP_868201.1 CDS fabZ NC_005027.1 4346827 4347360 D PMID: 7806516 best DB hits: BLAST: gb:AAF98278.1; AF197933_8 (AF197933) beta-hydroxyacyl-ACP; E=2e-14 gb:AAK04875.1; AE006311_6 (AE006311); E=3e-14 pir:C82731; (3r)-hydroxymyristoyl ACP dehydrase XF1044 [imported] -; E=6e-14 COG: XF1044; COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier; E=6e-15 PFAM: PF01377; Thioester dehydrase; E=2.1e-18 PF01575; MaoC like domain; E=0.0056; beta-hydroxyacyl-ACP dehydratase 4346827..4347360 Rhodopirellula baltica SH 1 1795859 NP_868202.1 CDS fabI NC_005027.1 4347357 4348190 D PMID: 20138198 best DB hits: BLAST: gb:AAF05840.1; AF197058_1 (AF197058) trans-2-enoyl-ACP reductase; E=6e-31 ddbj:BAB06562.1; (AP001516) enoyl-[acyl-carrier protein]; E=5e-29 gb:AAD04184.1; (L10036) unknown [Nostoc sp. PCC 7120]; E=2e-28 COG: BH2843; COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH); E=5e-30 TM0441; COG1028 Dehydrogenases with different specificities (related; E=1e-09 BS_yfhR; COG1028 Dehydrogenases with different specificities; E=1e-06 PFAM: PF00678; Short chain dehydrogenase/redu; E=7.1e-05; trans-2-enoyl-ACP reductase 4347357..4348190 Rhodopirellula baltica SH 1 1794186 NP_868203.1 CDS ilvE NC_005027.1 4348269 4349126 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 4348269..4349126 Rhodopirellula baltica SH 1 1791693 NP_868204.1 CDS RB8127 NC_005027.1 4349191 4349979 D hypothetical protein 4349191..4349979 Rhodopirellula baltica SH 1 1791532 NP_868205.1 CDS RB8132 NC_005027.1 4349972 4350505 D hypothetical protein 4349972..4350505 Rhodopirellula baltica SH 1 1793388 NP_868206.1 CDS RB8134 NC_005027.1 4350477 4351796 D PMID: 93188700 best DB hits: BLAST: embl:CAA19102.1; (AL023591) hypothetical protein MLCB1259.27; E=1e-95 swissprot:Q50739; YP59_MYCTU HYPOTHETICAL 47.5 KDA PROTEIN RV2559C; E=2e-91 embl:CAB93386.1; (AL357523) conserved ATPGTP binding protein; E=2e-90 COG: Rv2559c; COG2256 Uncharacterized ATPase related to the helicase; E=2e-92 ycaJ; COG2256 Uncharacterized ATPase related to the helicase subunit; E=4e-86 HI1590; COG2256 Uncharacterized ATPase related to the helicase; E=1e-85 PFAM: PF01057; Parvovirus non-structural pro; E=0.099 PF00910; RNA helicase; E=0.0011 PF00004; ATPase associated with; E=7.6e-20; recombination factor protein RarA 4350477..4351796 Rhodopirellula baltica SH 1 1796443 NP_868207.1 CDS RB8137 NC_005027.1 4351882 4352109 R hypothetical protein complement(4351882..4352109) Rhodopirellula baltica SH 1 1796388 NP_868208.1 CDS RB8138 NC_005027.1 4351960 4352187 D hypothetical protein 4351960..4352187 Rhodopirellula baltica SH 1 1791467 NP_868209.1 CDS RB8140 NC_005027.1 4352189 4353931 R best DB hits: BLAST: pir:T47011; hypothetical protein [imported] - Yersinia pestis; E=0.020 embl:CAB58305.1; (AL121854) hypothetical protein SCJ33.06c; E=0.11 pir:E69891; cytochrome c biogenesis protein CycX homolog homolog; E=0.28; hypothetical protein complement(4352189..4353931) Rhodopirellula baltica SH 1 1793211 NP_868210.1 CDS RB8143 NC_005027.1 4353961 4354179 R hypothetical protein complement(4353961..4354179) Rhodopirellula baltica SH 1 1797151 NP_868211.1 CDS RB8144 NC_005027.1 4354191 4354622 R hypothetical protein complement(4354191..4354622) Rhodopirellula baltica SH 1 1796430 NP_868212.1 CDS RB8146 NC_005027.1 4354667 4355122 R hypothetical protein complement(4354667..4355122) Rhodopirellula baltica SH 1 1796281 NP_868213.1 CDS csrA NC_005027.1 4355339 4355551 D PMID: 8393005 PMID: 7751274 PMID: 9211896 best DB hits: BLAST: ddbj:BAB07336.1; (AP001519) carbon storage regulator [Bacillus; E=2e-07 swissprot:O83663; CSRA_TREPA CARBON STORAGE REGULATOR HOMOLOG; E=5e-07 swissprot:P44879; CSRA_HAEIN CARBON STORAGE REGULATOR HOMOLOG; E=6e-06 COG: BH3617; COG1551 Carbon storage regulator (could also regulate; E=2e-08 PFAM: PF02599; Carbon storage regulator; E=8.9e-27; carbon storage regulator 4355339..4355551 Rhodopirellula baltica SH 1 1791005 NP_868214.1 CDS RB8150 NC_005027.1 4356002 4357339 R signal peptide complement(4356002..4357339) Rhodopirellula baltica SH 1 1797168 NP_868215.1 CDS RB8152 NC_005027.1 4357496 4357870 D best DB hits: BLAST: pir:C75577; conserved hypothetical protein - Deinococcus radiodurans; E=1e-13 pir:E70324; conserved hypothetical protein aq_268 - Aquifex aeolicus; E=3e-07 swissprot:P44675; YFHP_HAEIN HYPOTHETICAL PROTEIN HI0379 -----; E=2e-04 COG: DRA0242; COG1959 Predicted transcriptional regulator; E=1e-14 PFAM: PF02082; Uncharacterized protein family UPF00; E=6.3e-10; a transcriptional regulator 4357496..4357870 Rhodopirellula baltica SH 1 1790505 NP_868216.1 CDS RB8153 NC_005027.1 4357932 4359392 R PMID: 8168477 PMID: 10360571 best DB hits: BLAST: swissprot:P56727; Y929_THEMA HYPOTHETICAL PROTEIN TM0929 -----; E=1e-09 embl:CAA57668.1; (X82178) orf1 [Thermotoga maritima]; E=0.34 gb:AAA65436.1; (U24145) orf1; upstream of ferrodoxin; Method:; E=0.34; hypothetical protein complement(4357932..4359392) Rhodopirellula baltica SH 1 1792725 NP_868217.1 CDS RB8157 NC_005027.1 4359389 4360483 R PMID: 99287316 best DB hits: BLAST: pir:B72315; conserved hypothetical protein - Thermotoga maritima; E=1e-25 pir:T35221; probable ATPGTP binding protein - Streptomyces; E=5e-15 pir:A75429; conserved hypothetical protein - Deinococcus radiodurans; E=1e-07 COG: TM0930; COG0714 MoxR-like ATPases; E=1e-26; hypothetical protein complement(4359389..4360483) Rhodopirellula baltica SH 1 1790988 NP_868218.1 CDS RB8158 NC_005027.1 4360522 4361223 R hypothetical protein complement(4360522..4361223) Rhodopirellula baltica SH 1 1796556 NP_868219.1 CDS exoA NC_005027.1 4361220 4361990 R PMID: 1708495 best DB hits: BLAST: swissprot:P37454; EXOA_BACSU EXODEOXYRIBONUCLEASE ----- pir:; E=7e-78 pir:F64710; exodeoxyribonuclease - Helicobacter pylori (strain; E=3e-72 pir:C71809; exodeoxyribonuclease - Helicobacter pylori (strain J99); E=2e-71 COG: BS_exoA; COG0708 Exonuclease III; E=7e-79 PFAM: PF01181; Deoxyribonuclease I (DNase I); E=0.25 PF01260; AP endonuclease 1; E=2e-108; exodeoxyribonuclease complement(4361220..4361990) Rhodopirellula baltica SH 1 1790191 NP_868220.1 CDS RB8163 NC_005027.1 4361987 4362685 R best DB hits: BLAST: pir:F75496; conserved hypothetical protein - Deinococcus radiodurans; E=1e-63 gb:AAG19057.1; (AE005004) Vng0533h [Halobacterium sp. NRC-1]; E=5e-34 embl:CAB93731.1; (AL357613) hypothetical protein SC5F8.03c.; E=9e-30 COG: DR0625; COG2013 Uncharacterized ACR; E=1e-64; hypothetical protein complement(4361987..4362685) Rhodopirellula baltica SH 1 1790232 NP_868221.1 CDS RB8165 NC_005027.1 4362702 4362863 R hypothetical protein complement(4362702..4362863) Rhodopirellula baltica SH 1 1796382 NP_868222.1 CDS RB8167 NC_005027.1 4362882 4365650 D best DB hits: BLAST: pir:G71299; conserved hypothetical protein TP0648 - syphilis; E=0.027 pir:S49376; hypothetical protein 3 - Pseudomonas aeruginosa -----; E=0.11 pir:F69210; conserved hypothetical protein MTH83 - Methanobacterium; E=0.20 COG: TP0648; COG0457 TPR-repeat-containing proteins; E=0.003 PFAM: PF00515; TPR Domain; E=0.0036; hypothetical protein 4362882..4365650 Rhodopirellula baltica SH 1 1794460 NP_868223.1 CDS RB8171 NC_005027.1 4365647 4366831 D PMID: 11259647; hypothetical protein 4365647..4366831 Rhodopirellula baltica SH 1 1795897 NP_868224.1 CDS moxR NC_005027.1 4366881 4367900 D best DB hits: BLAST: pir:C83106; conserved hypothetical protein PA4322 [imported] -; E=2e-61 pir:G71146; hypothetical protein PH0385 - Pyrococcus horikoshii; E=1e-60 pir:H82493; MoxR-related protein VCA0175 [imported] - Vibrio; E=2e-60 COG: PA4322; COG0714 MoxR-like ATPases; E=2e-62 PFAM: PF00004; ATPase associated with; E=0.0029 PF01078; Magnesium chelatase, subunit; E=1.7e-06; MoxR-related protein 4366881..4367900 Rhodopirellula baltica SH 1 1796400 NP_868225.1 CDS RB8174 NC_005027.1 4367851 4368960 D best DB hits: BLAST: swissprot:P71761; YE80_MYCTU HYPOTHETICAL 34.3 KDA PROTEIN RV1480; E=2e-17 pir:G82493; conserved hypothetical protein VCA0174 [imported] -; E=1e-12 pir:H83261; hypothetical protein PA3071 [imported] - Pseudomonas; E=2e-12 COG: Rv1480; COG1721 Uncharacterized ACR; E=1e-18 PFAM: PF01882; Protein of unknown function DUF58; E=8.4e-16; hypothetical protein 4367851..4368960 Rhodopirellula baltica SH 1 1796415 NP_868226.1 CDS RB8176 NC_005027.1 4368957 4371071 D PMID: 2450046 PMID: 2446322 PMID: 2462430 PMID: 3663330 PMID: 2476436 PMID: 1384548 best DB hits: BLAST: swissprot:P19823; ITH2_HUMAN INTER-ALPHA-TRYPSIN INHIBITOR HEAVY; E=0.69 ref:XP_011910.1; similar to inter-alpha (globulin) inhibitor, H2; E=0.69; inter-alpha-trypsin inhibitor heavy chain H2 [precursor] 4368957..4371071 Rhodopirellula baltica SH 1 1796049 NP_868227.1 CDS RB8177 NC_005027.1 4371052 4375008 D hypothetical protein 4371052..4375008 Rhodopirellula baltica SH 1 1796096 NP_868228.1 CDS RB8181 NC_005027.1 4375005 4377428 D best DB hits: PFAM: PF00672; HAMP domain; E=0.22; hypothetical protein 4375005..4377428 Rhodopirellula baltica SH 1 1791627 NP_868229.1 CDS RB8186 NC_005027.1 4377386 4378576 D signal peptide 4377386..4378576 Rhodopirellula baltica SH 1 1793549 NP_868230.1 CDS RB8188 NC_005027.1 4378573 4379352 D best DB hits: BLAST: gb:AAG54864.1; AE005231_11 (AE005231) glyoxylate-induced protein; E=9e-21 gb:AAG59852.1; AF284750_1 (AF284750) HT036-ISO [Homo sapiens]; E=1e-20 swissprot:Q44015; YGB4_ALCEU HYPOTHETICAL 28.3 KDA PROTEIN IN GBD; E=1e-20 COG: gip; COG1082 Predicted endonucleases; E=3e-21; glyoxylate-induced protein 4378573..4379352 Rhodopirellula baltica SH 1 1790711 NP_868231.1 CDS deaD NC_005027.1 4379339 4382134 R PMID: 8056751 best DB hits: BLAST: pir:G82830; ATP-dependent RNA helicase XF0252 [imported] - Xylella; E=1e-151 swissprot:Q11039; DEAD_MYCTU COLD-SHOCK DEAD-BOX PROTEIN A HOMOLOG; E=1e-128 pir:JX0314; DEAD box protein - Klebsiella pneumoniae ----- gb:; E=1e-128 COG: XF0252; COG0513 Superfamily II DNA and RNA helicases; E=1e-152 PFAM: PF00270; DEAD/DEAH box helicase; E=9.2e-70 PF00271; Helicase conserved C-terminal doma; E=7.8e-35; ATP-dependent RNA helicase complement(4379339..4382134) Rhodopirellula baltica SH 1 1796998 NP_868232.1 CDS RB8191 NC_005027.1 4382096 4382314 D hypothetical protein 4382096..4382314 Rhodopirellula baltica SH 1 1791497 NP_868233.1 CDS RB8192 NC_005027.1 4382297 4382404 R hypothetical protein complement(4382297..4382404) Rhodopirellula baltica SH 1 1793116 NP_868234.1 CDS RB8193 NC_005027.1 4382501 4382656 D hypothetical protein 4382501..4382656 Rhodopirellula baltica SH 1 1795975 NP_868235.1 CDS RB8194 NC_005027.1 4382684 4383916 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein 4382684..4383916 Rhodopirellula baltica SH 1 1796050 NP_868236.1 CDS RB8195 NC_005027.1 4383964 4384356 R hypothetical protein complement(4383964..4384356) Rhodopirellula baltica SH 1 1792385 NP_868237.1 CDS RB8199 NC_005027.1 4384410 4385729 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.0077; hypothetical protein 4384410..4385729 Rhodopirellula baltica SH 1 1790918 NP_868238.1 CDS RB8202 NC_005027.1 4385820 4386506 R PMID: 8407798 best DB hits: BLAST: swissprot:P50619; YMAB_BACSU HYPOTHETICAL 23.4 KD PROTEIN IN; E=1e-17 pir:G72261; conserved hypothetical protein - Thermotoga maritima; E=9e-13; hypothetical protein complement(4385820..4386506) Rhodopirellula baltica SH 1 1791201 NP_868239.1 CDS mpg NC_005027.1 4386548 4387249 R PMID: 95134354 best DB hits: BLAST: embl:CAA52615.1; (X74509) N-methylpurine-DNA glycosirase (MPG); E=9e-26 pdb:1F4R; A Chain A, Crystal Structure Of The Human Aag Dna Repair; E=3e-22 gb:AAA58369.1; (M71215) alkyl-N-purine-DNA glycosylasee [Homo; E=5e-22 COG: APE2247; COG2094 3-methyladenine DNA glycosylase; E=8e-18 PFAM: PF02245; Methylpurine-DNA glycosylase (M; E=2.2e-44; N-methylpurine-DNA glycosirase (MPG) complement(4386548..4387249) Rhodopirellula baltica SH 1 1795043 NP_868240.1 CDS trzA NC_005027.1 4387234 4388472 D PMID: 7592318 best DB hits: BLAST: ddbj:BAB05411.1; (AP001512) BH1692~unknown conserved protein in; E=1e-18 swissprot:Q9RW45; Y824_DEIRA HYPOTHETICAL PROTEIN DR0824 -----; E=1e-16 swissprot:O27549; YF05_METTH HYPOTHETICAL PROTEIN MTH1505 -----; E=5e-16 COG: BH1692; COG0402 Cytosine deaminase and related metal-dependent; E=1e-19 PFAM: PF00744; Dihydroorotase-like; E=0.025 PF01979; Adenine deaminase; E=0.099 PF00962; Adenosine/AMP deaminase; E=0.05; chlorohydrolase 4387234..4388472 Rhodopirellula baltica SH 1 1796547 NP_868241.1 CDS RB8209 NC_005027.1 4388391 4389188 R best DB hits: PFAM: PF02517; CAAX amino terminal protease; E=0.1; hypothetical protein complement(4388391..4389188) Rhodopirellula baltica SH 1 1795423 NP_868242.1 CDS RB8210 NC_005027.1 4389198 4391078 R PMID: 1349418 best DB hits: BLAST: ddbj:BAB04170.1; (AP001508) lantibiotic mersacidin transporter; E=5e-21 swissprot:P45861; YWJA_BACSU HYPOTHETICAL ABC TRANSPORTER; E=7e-21 ddbj:BAB04845.1; (AP001511) ABC transporter (ATP-binding protein); E=5e-20 COG: BH0451; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain; E=5e-22 BS_ywjA; COG1132 ABC-type multidrug/protein/lipid transport system,; E=6e-22 VCA1084; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain; E=2e-17 PFAM: PF00005; ABC transporter; E=0.024; lantibiotic mersacidin transporter system complement(4389198..4391078) Rhodopirellula baltica SH 1 1790026 NP_868243.1 CDS RB8214 NC_005027.1 4391179 4392948 R best DB hits: BLAST: pir:S76926; hypothetical protein - Synechocystis sp. (strain PCC; E=1e-06 gb:AAC36156.1; (AF003632) PilI [Myxococcus xanthus]; E=0.016 COG: sll1107; COG1277 Permease component of an ABC-transporter; E=9e-08; membrane bound transporter complement(4391179..4392948) Rhodopirellula baltica SH 1 1791931 NP_868244.1 CDS RB8217 NC_005027.1 4393113 4393709 R PMID: 11997336 best DB hits: BLAST: pir:H72201; conserved hypothetical protein - Thermotoga maritima; E=1e-14 pir:A70337; hypothetical protein aq_408 - Aquifex aeolicus -----; E=1e-08; hypothetical protein complement(4393113..4393709) Rhodopirellula baltica SH 1 1792505 NP_868245.1 CDS aspC NC_005027.1 4393980 4395161 D PMID: 8907187 PMID: 10029535 best DB hits: BLAST: ddbj:BAB07069.1; (AP001518) aspartate aminotransferase [Bacillus; E=2e-59 embl:CAC11669.1; (AL445064) probable aspartate aminotransferase; E=9e-55 pir:G69119; probable aspartate transaminase (EC 2.6.1.1) MTH1894; E=2e-54 COG: BH3350; COG0436 PLP-dependent aminotransferases; E=2e-60 PFAM: PF01041; DegT/DnrJ/EryC1/StrS family; E=1.5e-05 PF01053; Cys/Met metabolism PLP-depend; E=5.4e-05 PF00222; Aminotransferase class-II; E=0.28; aspartate aminotransferase 4393980..4395161 Rhodopirellula baltica SH 1 1794701 NP_868246.1 CDS RB8221 NC_005027.1 4395234 4396553 D PMID: 7704274 best DB hits: BLAST: ddbj:BAB06322.1; (AP001516) O-acetylhomoserine sulfhydrylase; E=1e-123 pir:D72324; O-acetylhomoserine sulfhydrylase - Thermotoga maritima; E=1e-114 pir:T40463; O-acetylhomoserine (thiol)-lyase (EC 4.2.99.10) -; E=1e-110 COG: BH2603; COG2873 O-acetylhomoserine sulfhydrylase; E=1e-124 DR0921; COG0626 Cystathionine beta-lyases/cystathionine; E=7e-63 PFAM: PF01053; Cys/Met metabolism PLP-depend; E=6.3e-204; O-acetylhomoserine sulfhydrylase 4395234..4396553 Rhodopirellula baltica SH 1 1796787 NP_868247.1 CDS metX NC_005027.1 4396604 4398475 D PMID: 9209059 best DB hits: BLAST: swissprot:P57714; METX_PSEAE HOMOSERINE O-ACETYLTRANSFERASE; E=1e-83 swissprot:P94891; METX_LEPME HOMOSERINE O-ACETYLTRANSFERASE; E=7e-78 swissprot:Q9JZQ5; METX_NEIMB HOMOSERINE O-ACETYLTRANSFERASE; E=1e-77 COG: PA0390; COG2021 Homoserine acetyltransferase; E=1e-84 PA0389; COG0500 SAM-dependent methyltransferases; E=2e-26 MTH1820; COG2021 Homoserine acetyltransferase; E=8e-14 PFAM: PF00561; alpha/beta hydrolase fold; E=6.7e-07; homoserine O-acetyltransferase 4396604..4398475 Rhodopirellula baltica SH 1 1789924 NP_868248.1 CDS RB8223 NC_005027.1 4398527 4399759 R best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein complement(4398527..4399759) Rhodopirellula baltica SH 1 1793493 NP_868249.1 CDS RB8226 NC_005027.1 4399783 4400097 R signal peptide complement(4399783..4400097) Rhodopirellula baltica SH 1 1796455 NP_868250.1 CDS RB8227 NC_005027.1 4400186 4400365 R hypothetical protein complement(4400186..4400365) Rhodopirellula baltica SH 1 1792928 NP_868251.1 CDS RB8228 NC_005027.1 4400412 4401449 R signal peptide complement(4400412..4401449) Rhodopirellula baltica SH 1 1791936 NP_868252.1 CDS RB8229 NC_005027.1 4401422 4401721 D hypothetical protein 4401422..4401721 Rhodopirellula baltica SH 1 1795600 NP_868253.1 CDS ilvH NC_005027.1 4401779 4402291 D PMID: 98037514 best DB hits: BLAST: pir:A69115; hypothetical protein MTH1854 - Methanobacterium; E=4e-13 pir:D69083; hypothetical protein MTH162 - Methanobacterium; E=4e-09 gb:AAB89585.1; (AE000988) acetolactate synthase, small subunit,; E=5e-07 PFAM: PF01842; ACT domain; E=0.0014; acetolactate synthase small regulatory subunit 4401779..4402291 Rhodopirellula baltica SH 1 1793718 NP_868254.1 CDS hemH NC_005027.1 4402467 4403522 D protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 4402467..4403522 Rhodopirellula baltica SH 1 1796504 NP_868255.1 CDS RB8234 NC_005027.1 4403418 4404629 R signal peptide complement(4403418..4404629) Rhodopirellula baltica SH 1 1791504 NP_868256.1 CDS RB8236 NC_005027.1 4403595 4403942 D hypothetical protein 4403595..4403942 Rhodopirellula baltica SH 1 1794515 NP_868257.1 CDS prdX2 NC_005027.1 4403997 4404593 D PMID: 9115640 best DB hits: BLAST: ref:XP_009063.1; TR00071480_p [Homo sapiens]; E=2e-62 swissprot:Q61171; PDX2_MOUSE PEROXIREDOXIN 2 (THIOREDOXIN; E=3e-62 swissprot:P32119; PDX2_HUMAN PEROXIREDOXIN 2 (THIOREDOXIN; E=4e-62 COG: PA0848; COG0450 Thiol - alkyl hydroperoxide reductases; E=4e-60 PFAM: PF00578; AhpC/TSA family; E=1e-71; peroxiredoxin 2 4403997..4404593 Rhodopirellula baltica SH 1 1789908 NP_868258.1 CDS RB8239 NC_005027.1 4404615 4405322 D hypothetical protein 4404615..4405322 Rhodopirellula baltica SH 1 1793596 NP_868259.1 CDS RB8240 NC_005027.1 4405428 4407911 D PMID: 9804807 best DB hits: BLAST: swissprot:P44973; 60IM_HAEIN 60 KDA INNER-MEMBRANE PROTEIN HOMOLOG; E=7e-31 gb:AAG58902.1; AE005601_8 (AE005601) 60 KD inner-membrane protein; E=4e-30 swissprot:P25714; 60IM_ECOLI 60 KDA INNER-MEMBRANE PROTEIN -----; E=4e-30 COG: HI1001; COG0706 Preprotein translocase subunit YidC; E=6e-32 PFAM: PF00595; PDZ domain (Also known as DHR or GLG; E=5.2e-06 PF02096; 60Kd inner membrane protein; E=2.8e-49; hypothetical protein 4405428..4407911 Rhodopirellula baltica SH 1 1790126 NP_868260.1 CDS RB8243 NC_005027.1 4407852 4408184 R hypothetical protein complement(4407852..4408184) Rhodopirellula baltica SH 1 1793391 NP_868261.1 CDS RB8245 NC_005027.1 4408205 4408444 R hypothetical protein complement(4408205..4408444) Rhodopirellula baltica SH 1 1795180 NP_868262.1 CDS RB8246 NC_005027.1 4408441 4409241 R best DB hits: BLAST: embl:CAB59607.1; (AL132662) transmembrane protein; E=6e-08 pir:G83504; hypothetical protein PA1139 [imported] - Pseudomonas; E=6e-06 pir:T35659; probable transmembrane protein - Streptomyces coelicolor; E=2e-05 COG: PA1139; COG2340 Uncharacterized protein with SCP/PR1 domains; E=6e-07; transmembrane protein complement(4408441..4409241) Rhodopirellula baltica SH 1 1796325 NP_868263.1 CDS RB8247 NC_005027.1 4409183 4409386 R hypothetical protein complement(4409183..4409386) Rhodopirellula baltica SH 1 1792896 NP_868264.1 CDS RB8248 NC_005027.1 4409395 4410156 D PMID: 11571162 PMID: 89125597 best DB hits: BLAST: embl:CAA98652.1; (Z74134) ORF YDL086w [Saccharomyces cerevisiae]; E=2e-36 gb:AAC69477.1; (AF087482) dienelactone hydrolase [Pseudomonas; E=3e-09 ddbj:BAA74533.1; (AB019032) dienelactone hydrolase [Ralstonia; E=1e-08 COG: YDL086w; COG0412 Dienelactone hydrolase and related enzymes; E=2e-37 PFAM: PF01738; Dienelactone hydrolase; E=4.2e-05; carboxymethylenebutenolidase 4409395..4410156 Rhodopirellula baltica SH 1 1796158 NP_868265.1 CDS aspS NC_005027.1 4410353 4412131 D PMID: 2129559 PMID: 1944398 PMID: 10562565 PMID: 10873442 best DB hits: BLAST: swissprot:O32038; SYD_BACSU ASPARTYL-TRNA SYNTHETASE; E=1e-165 ddbj:BAB04971.1; (AP001511) aspartyl-tRNA synthetase [Bacillus; E=1e-161 swissprot:O67589; SYD_AQUAE ASPARTYL-TRNA SYNTHETASE; E=1e-157 COG: BS_aspS; COG0173 Aspartyl-tRNA synthetase; E=1e-166 PFAM: PF01336; OB-fold nucleic acid binding dom; E=2.2e-11 PF00152; tRNA synthetases class II (D, K; E=8.2e-21 PF01409; tRNA synthetases class II (F); E=0.69; aspartyl-tRNA synthetase 4410353..4412131 Rhodopirellula baltica SH 1 1790492 NP_868266.1 CDS RB8254 NC_005027.1 4412322 4414511 D PMID: 9308174 best DB hits: BLAST: gb:AAB89635.1; (AE000991) cationic amino acid transporter (cat-1); E=3e-38 gb:AAG20879.1; (AE005155) cationic amino acid transporter; Cat2; E=1e-29 gb:AAG18789.1; (AE004983) cationic amino acid transporter; Cat1; E=6e-21 COG: AF1612_1; COG0531 Amino acid transporters; E=2e-32 PA5097; COG1113 Gamma-aminobutyrate and related permeases; E=4e-12 BS_ykbA; COG0531 Amino acid transporters; E=8e-12 PFAM: PF00324; Amino acid permease; E=2e-08; cationic amino acid transporter (cat-1) 4412322..4414511 Rhodopirellula baltica SH 1 1793312 NP_868267.1 CDS RB8257 NC_005027.1 4414523 4414690 R hypothetical protein complement(4414523..4414690) Rhodopirellula baltica SH 1 1793524 NP_868268.1 CDS RB8258 NC_005027.1 4414716 4415126 D hypothetical protein 4414716..4415126 Rhodopirellula baltica SH 1 1796881 NP_868269.1 CDS RB8260 NC_005027.1 4415068 4415394 R PMID: 20150255 best DB hits: BLAST: pir:H72072; conserved hypothetical protein CP0257 [imported] -; E=2e-10 pir:F81677; conserved hypothetical protein TC0667 [imported] -; E=4e-10 pir:B71520; hypothetical protein CT388 - Chlamydia trachomatis; E=6e-10 COG: CPn0497; COG1872 Uncharacterized ACR; E=2e-11 PFAM: PF02594; Uncharacterized ACR, YggU family COG; E=4.7e-22; hypothetical protein complement(4415068..4415394) Rhodopirellula baltica SH 1 1796600 NP_868270.1 CDS putA NC_005027.1 4415391 4419104 R PMID: 96062224 best DB hits: BLAST: pir:H64526; proline dehydrogenase (EC 1.5.99.8); E=0.0 pir:B71980; proline dehydrogenase (EC 1.5.99.8); E=0.0 pir:C81297; proline dehydrogenase (EC 1.5.99.8); E=1e-180 COG: jhp0048_2; COG1012 NAD-dependent aldehyde dehydrogenases; E=1e-123 Cj1503c_1; COG0506 Proline dehydrogenase; E=2e-56 sll1561_2; COG1012 NAD-dependent aldehyde dehydrogenases; E=1e-51 PFAM: PF01619; Proline dehydrogenase; E=2e-36 PF00171; Aldehyde dehydrogenase; E=0.0014; proline dehydrogenase complement(4415391..4419104) Rhodopirellula baltica SH 1 1790663 NP_868271.1 CDS RB8265 NC_005027.1 4419178 4419603 D best DB hits: BLAST: swissprot:O67466; YE94_AQUAE HYPOTHETICAL PROTEIN AQ_1494 -----; E=3e-12 pir:B75463; conserved hypothetical protein - Deinococcus radiodurans; E=4e-10 pir:I39564; hypothetical protein 6 gbd-region [imported] -; E=1e-08 COG: aq_1494; COG0824 Predicted thioesterase; E=3e-13; thioesterase 4419178..4419603 Rhodopirellula baltica SH 1 1793460 NP_868272.1 CDS RB8266 NC_005027.1 4419639 4420688 D best DB hits: BLAST: gb:AAK03329.1; (AE006164) unknown [Pasteurella multocida]; E=1e-04 swissprot:Q58707; YD11_METJA HYPOTHETICAL PROTEIN MJ1311 -----; E=2e-04 pir:S47803; hypothetical 33.7K protein (avtA-selB intergenic region); E=0.002 COG: MJ1311; COG1082 Predicted endonucleases; E=2e-05; hypothetical protein 4419639..4420688 Rhodopirellula baltica SH 1 1796122 NP_868273.1 CDS RB8268 NC_005027.1 4420685 4421662 D best DB hits: BLAST: swissprot:P73460; YB44_SYNY3 HYPOTHETICAL 34.4 KDA PROTEIN SLL1144; E=2e-40 swissprot:Q9WZX6; Y872_THEMA HYPOTHETICAL PROTEIN TM0872 -----; E=7e-40 gb:AAK02218.1; (AE006048) unknown [Pasteurella multocida]; E=4e-38 COG: sll1144; COG0275 Predicted S-adenosylmethionine-dependent; E=2e-41 PFAM: PF01795; MraW methylase; E=2e-100; methyltransferase 4420685..4421662 Rhodopirellula baltica SH 1 1796491 NP_868274.1 CDS RB8271 NC_005027.1 4421746 4422867 R hypothetical protein complement(4421746..4422867) Rhodopirellula baltica SH 1 1791752 NP_868275.1 CDS RB8274 NC_005027.1 4422882 4424753 D PMID: 8346225 PMID: 9097040 best DB hits: BLAST: swissprot:Q06067; ATOS_ECOLI SENSOR PROTEIN ATOS ----- pir:; E=2e-17 gb:AAD47419.1; AF100457_2 (AF100457) histidine kinase [Myxococcus; E=2e-16 ddbj:BAB04255.1; (AP001508) two-component sensor histidine kinase; E=3e-14 COG: atoS_3; COG0642 Sensory transduction histidine kinases; E=2e-18 Rv1827; COG1716 FHA-domain-containing proteins; E=1e-08 PA2882; COG0642 Sensory transduction histidine kinases; E=2e-08 PFAM: PF00498; FHA domain; E=3.2e-19 PF01590; GAF domain; E=4.8e-18 PF00512; His Kinase A (phosphoacceptor) doma; E=6.6e-07; sensor protein atoS 4422882..4424753 Rhodopirellula baltica SH 1 1796700 NP_868276.1 CDS RB8275 NC_005027.1 4424760 4424897 R hypothetical protein complement(4424760..4424897) Rhodopirellula baltica SH 1 1797174 NP_868277.1 CDS RB8278 NC_005027.1 4424907 4425257 R hypothetical protein complement(4424907..4425257) Rhodopirellula baltica SH 1 1793254 NP_868278.1 CDS RB8279 NC_005027.1 4425128 4425343 D hypothetical protein 4425128..4425343 Rhodopirellula baltica SH 1 1791717 NP_868279.1 CDS RB8280 NC_005027.1 4425318 4425707 D PMID: 11759840; hypothetical protein 4425318..4425707 Rhodopirellula baltica SH 1 1795032 NP_868280.1 CDS RB8281 NC_005027.1 4425696 4425938 R hypothetical protein complement(4425696..4425938) Rhodopirellula baltica SH 1 1797172 NP_868281.1 CDS RB8282 NC_005027.1 4426169 4427014 R hypothetical protein complement(4426169..4427014) Rhodopirellula baltica SH 1 1791750 NP_868282.1 CDS RB8284 NC_005027.1 4427175 4428167 R PMID: 98196666 best DB hits: BLAST: pir:F70440; conserved hypothetical protein aq_1630 - Aquifex; E=3e-18 pir:D71323; conserved hypothetical protein TP0436 - syphilis; E=3e-18 pir:F69999; conserved hypothetical protein ytqI - Bacillus subtilis; E=1e-16 COG: aq_1630; COG0618 Exopolyphosphatase-related proteins; E=3e-19 PFAM: PF01368; DHH family; E=2.4e-12 PF02272; DHHA1 domain; E=2.2e-06; a phopsphoesterase or an exonuclease complement(4427175..4428167) Rhodopirellula baltica SH 1 1792531 NP_868283.1 CDS ribF NC_005027.1 4428183 4429154 R PMID: 7772835 PMID: 3023344 best DB hits: BLAST: pir:T35984; probable riboflavin kinase (FAD synthetase) -; E=3e-46 pir:C83077; riboflavin kinaseFAD synthase PA4561 [imported] -; E=4e-42 pir:C82293; riboflavin kinaseFMN adenylyltransferase VC0681; E=2e-41 COG: PA4561; COG0196 FAD synthase; E=4e-43 PFAM: PF01687; Riboflavin kinase / FAD synthetase; E=3.3e-32; riboflavin kinase (FAD synthetase) complement(4428183..4429154) Rhodopirellula baltica SH 1 1789926 NP_868284.1 CDS RB8287 NC_005027.1 4429273 4430187 R PMID: 20406833 best DB hits: BLAST: pir:H82489; conserved hypothetical protein VCA0191 [imported] -; E=2e-23 pir:G81111; conserved hypothetical protein NMB1197, NMB1159; E=4e-21 pir:C72317; conserved hypothetical protein - Thermotoga maritima; E=9e-21 COG: VCA0191_2; COG0063 Predicted sugar kinase; E=8e-24 PFAM: PF01256; Uncharacterized protein family UPF00; E=3.6e-40; sugar kinase complement(4429273..4430187) Rhodopirellula baltica SH 1 1790502 NP_868285.1 CDS RB8290 NC_005027.1 4430350 4431591 D PMID: 8170937 best DB hits: BLAST: pir:S76018; hypothetical protein - Synechocystis sp. (strain PCC; E=2e-61 swissprot:Q58752; YD57_METJA POTASSIUM CHANNEL PROTEIN; E=1e-36 swissprot:Q57604; Y13B_METJA POTASSIUM CHANNEL PROTEIN; E=2e-34 COG: sll0536; COG1226 Kef-type K+ transport systems, predicted; E=1e-62 MJ1357; COG1226 Kef-type K+ transport systems, predicted NAD-binding; E=1e-37 MJ0138.1; COG1226 Kef-type K+ transport systems, predicted; E=2e-35 PFAM: PF00520; Ion transport protein; E=0.45 PF02254; KTN NAD-binding domain; E=5.2e-39 PF02080; Potassium channel; E=2.2e-09; potassium channel 4430350..4431591 Rhodopirellula baltica SH 1 1793764 NP_868286.1 CDS purE NC_005027.1 4431605 4432453 R PMID: 98049343 PMID: 8809759 best DB hits: BLAST: gb:AAB89969.1; (AE001016) conserved hypothetical protein; E=4e-29 pir:S76797; hypothetical protein - Synechocystis sp. (strain PCC; E=7e-28 gb:AAD29318.1; AF117208_1 (AF117208) circadian phase modifier; E=2e-24 COG: AF1275; COG1691 NCAIR mutase (PurE)-related proteins; E=4e-30; phosphoribosylcarboxyaminoimidazole mutase (purE) complement(4431605..4432453) Rhodopirellula baltica SH 1 1793455 NP_868287.1 CDS argG NC_005027.1 4432457 4433791 D PMID: 20158877 PMID: 90046714 PMID: 3174461 best DB hits: BLAST: pir:H72210; argininosuccinate synthase - Thermotoga maritima (strain; E=2e-97 pir:D75490; arginosuccinate synthase - Deinococcus radiodurans; E=3e-96 pir:C83204; argininosuccinate synthase PA3525 [imported] -; E=2e-87 COG: TM1780; COG0137 Argininosuccinate synthase; E=2e-98 PFAM: PF00764; Arginosuccinate synthase; E=2e-190; argininosuccinate synthase 4432457..4433791 Rhodopirellula baltica SH 1 1795790 NP_868288.1 CDS RB8295 NC_005027.1 4433907 4434830 R hypothetical protein complement(4433907..4434830) Rhodopirellula baltica SH 1 1792512 NP_868289.1 CDS dtd NC_005027.1 4434814 4435359 D hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 4434814..4435359 Rhodopirellula baltica SH 1 1797179 NP_868290.1 CDS RB8301 NC_005027.1 4435384 4436412 R hypothetical protein complement(4435384..4436412) Rhodopirellula baltica SH 1 1796359 NP_868291.1 CDS RB8306 NC_005027.1 4436602 4437399 D PMID: 2542219 best DB hits: PFAM: PF02674; Colicin V production protein; E=8.4e-14; colicin V biosynthesis protein 4436602..4437399 Rhodopirellula baltica SH 1 1791081 NP_868292.1 CDS RB8309 NC_005027.1 4437354 4437554 D hypothetical protein 4437354..4437554 Rhodopirellula baltica SH 1 1796160 NP_868293.1 CDS accA NC_005027.1 4437695 4438654 R best DB hits: BLAST: gb:AAK02376.1; (AE006064) AccA [Pasteurella multocida]; E=4e-72 swissprot:P43872; ACCA_HAEIN ACETYL-COENZYME A CARBOXYLASE; E=6e-72 ddbj:BAA77860.1; (D83536) Acetyl-CoA carboxylase (EC 6.4.1.2),; E=1e-68 COG: HI0406; COG0825 Acetyl-CoA carboxylase alpha subunit; E=5e-73; acetylCoA-carboxylase complement(4437695..4438654) Rhodopirellula baltica SH 1 1794220 NP_868294.1 CDS RB8311 NC_005027.1 4438658 4439752 R PMID: 7774814 best DB hits: BLAST: pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=2e-27 pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=1e-26 pir:T36501; probable serinethreonine protein kinase - Streptomyces; E=2e-26 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=1e-28 PFAM: PF00069; Protein kinase domain; E=3e-39; protein kinase yloP complement(4438658..4439752) Rhodopirellula baltica SH 1 1791335 NP_868295.1 CDS RB8313 NC_005027.1 4439844 4441088 R PMID: 10531250 best DB hits: BLAST: gb:AAD50490.1; AF172324_8 (AF172324) WbnE [Escherichia coli]; E=7e-21 pir:C70036; capsular polysaccharide biosynthesis homolog yveN -; E=2e-19 pir:T35514; probable glycosyl transferase - Streptomyces coelicolor; E=2e-17 COG: BS_yveN; COG0438 Predicted glycosyltransferases; E=2e-20 PFAM: PF00534; Glycosyl transferases group 1; E=9.5e-43; glycosyl transferase (WbnE) complement(4439844..4441088) Rhodopirellula baltica SH 1 1796226 NP_868296.1 CDS whiG NC_005027.1 4441097 4441915 R PMID: 2507166 PMID: 94259284 best DB hits: BLAST: pir:S29615; whiG protein - Streptoverticillium griseocarneum -----; E=5e-44 gb:AAB41960.1; (U58281) sporulation sigma factor [Streptomyces; E=9e-44 prf:2013252A; RNA polymerase:SUBUNIT=sigma factor [Streptomyces; E=1e-43 COG: TP0709; COG1191 DNA-directed RNA polymerase specialized sigma; E=8e-41 fliA; COG1191 DNA-directed RNA polymerase specialized sigma subunit; E=2e-38 BS_sigD; COG1191 DNA-directed RNA polymerase specialized sigma; E=7e-34 PFAM: PF01399; PCI domain; E=0.026 PF00140; Sigma-70 factor; E=1.3e-59; RNA polymerase sigma factor whiG complement(4441097..4441915) Rhodopirellula baltica SH 1 1796695 NP_868297.1 CDS RB8318 NC_005027.1 4442037 4442318 R hypothetical protein complement(4442037..4442318) Rhodopirellula baltica SH 1 1791106 NP_868298.1 CDS RB8319 NC_005027.1 4442308 4442421 R hypothetical protein complement(4442308..4442421) Rhodopirellula baltica SH 1 1794937 NP_868299.1 CDS flhF NC_005027.1 4442485 4443879 R PMID: 1447978 best DB hits: BLAST: pir:B72319; flagellar biosynthesis protein FlhF - Thermotoga; E=9e-32 ddbj:BAB06156.1; (AP001515) flagella-associated protein [Bacillus; E=3e-22 swissprot:Q01960; FLHF_BACSU FLAGELLAR BIOSYNTHESIS PROTEIN FLHF; E=2e-21 COG: TM0907; COG1419 Flagellar GTP-binding protein; E=8e-33 AF0622; COG0541 Signal recognition particle GTPase; E=3e-09 PFAM: PF00005; ABC transporter; E=0.018 PF00931; NB-ARC domain; E=0.2 PF00004; ATPase associated with va; E=0.13; flagellar biosynthesis protein FlhF complement(4442485..4443879) Rhodopirellula baltica SH 1 1792132 NP_868300.1 CDS flhA NC_005027.1 4443876 4445939 R PMID: 8097015 best DB hits: BLAST: ddbj:BAB06157.1; (AP001515) flagella-associated protein [Bacillus; E=1e-119 pir:C72319; flagellar biosynthesis protein FlhA - Thermotoga; E=1e-115 swissprot:P35620; FLHA_BACSU FLAGELLAR BIOSYNTHESIS PROTEIN FLHA; E=1e-114 COG: BH2438; COG1298 Flagellar biosynthesis/type III secretory pathway; E=1e-120 PFAM: PF00771; FHIPEP family; E=1.6e-261; flagella-associated protein complement(4443876..4445939) Rhodopirellula baltica SH 1 1794984 NP_868301.1 CDS RB8324 NC_005027.1 4445997 4446113 R hypothetical protein complement(4445997..4446113) Rhodopirellula baltica SH 1 1796208 NP_868302.1 CDS RB8325 NC_005027.1 4446139 4447029 R hypothetical protein complement(4446139..4447029) Rhodopirellula baltica SH 1 1796257 NP_868303.1 CDS pknB NC_005027.1 4447147 4449489 R PMID: 1835671 best DB hits: BLAST: swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=2e-35 pir:T36501; probable serinethreonine protein kinase - Streptomyces; E=2e-34 embl:CAB94054.1; (AL358672) serinethreonine-protein; E=4e-34 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=2e-33 PFAM: PF00069; Protein kinase domain; E=3e-52 PF00191; Annexin; E=0.78; serine/threonine-protein kinase pknB complement(4447147..4449489) Rhodopirellula baltica SH 1 1793502 NP_868304.1 CDS RB8327 NC_005027.1 4449338 4449607 R hypothetical protein complement(4449338..4449607) Rhodopirellula baltica SH 1 1795196 NP_868305.1 CDS RB8328 NC_005027.1 4449636 4450601 D PMID: 97158661 best DB hits: BLAST: gb:AAB68787.1; (U97022) orf; similar to the Staphylococcus aureus; E=6e-35 gb:AAK06020.1; AE006422_9 (AE006422) HYPOTHETICAL PROTEIN; E=2e-29 ddbj:BAB04894.1; (AP001511) CMP-binding protein [Bacillus; E=1e-28 PFAM: PF01336; OB-fold nucleic acid binding domain; E=1.4e-05 PF01966; HD domain; E=1.1e-10; CMP-binding protein 4449636..4450601 Rhodopirellula baltica SH 1 1790885 NP_868306.1 CDS RB8329 NC_005027.1 4450583 4451335 D best DB hits: BLAST: pir:E83522; conserved hypothetical protein PA0976 [imported] -; E=6e-63 embl:CAB50783.1; (X74218) hypothetical protein [Pseudomonas; E=3e-62 pir:B82628; transcriptional regulator XF1858 [imported] - Xylella; E=1e-60 COG: PA0976; COG0603 Predicted ATPase (PP-loop superfamily), confers; E=6e-64 XF0999; COG0137 Argininosuccinate synthase; E=3e-04 PFAM: PF02568; Thiamine biosynthesis protein; E=0.087 PF00733; Asparagine synthase; E=0.26 PF00764; Arginosuccinate synthase; E=0.00022; transcriptional regulator 4450583..4451335 Rhodopirellula baltica SH 1 1793235 NP_868307.1 CDS RB8332 NC_005027.1 4451457 4451813 R hypothetical protein complement(4451457..4451813) Rhodopirellula baltica SH 1 1793110 NP_868308.1 CDS RB8333 NC_005027.1 4451489 4451839 D best DB hits: BLAST: embl:CAB77251.1; (AJ249487) accumulation-associated protein; E=0.75; hypothetical protein 4451489..4451839 Rhodopirellula baltica SH 1 1791586 NP_868309.1 CDS RB8335 NC_005027.1 4451919 4452278 D hypothetical protein 4451919..4452278 Rhodopirellula baltica SH 1 1791746 NP_868310.1 CDS RB8337 NC_005027.1 4452448 4454547 R hypothetical protein complement(4452448..4454547) Rhodopirellula baltica SH 1 1792918 NP_868311.1 CDS RB8342 NC_005027.1 4454565 4454696 R hypothetical protein complement(4454565..4454696) Rhodopirellula baltica SH 1 1796488 NP_868312.1 CDS purB NC_005027.1 4454677 4456134 D Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 4454677..4456134 Rhodopirellula baltica SH 1 1796353 NP_868313.1 CDS RB8344 NC_005027.1 4456118 4456243 D hypothetical protein 4456118..4456243 Rhodopirellula baltica SH 1 1790337 NP_868314.1 CDS RB8345 NC_005027.1 4456240 4457583 R best DB hits: BLAST: gb:AAD19720.1; (AF124349) unknown [Zymomonas mobilis]; E=0.54 PFAM: PF00076; RNA recognition motif. (a.k.a. RRM,; E=0.54; hypothetical protein complement(4456240..4457583) Rhodopirellula baltica SH 1 1796633 NP_868315.1 CDS RB8348 NC_005027.1 4457580 4457780 R hypothetical protein complement(4457580..4457780) Rhodopirellula baltica SH 1 1796703 NP_868316.1 CDS RB8350 NC_005027.1 4457938 4459383 R hypothetical protein complement(4457938..4459383) Rhodopirellula baltica SH 1 1796577 NP_868317.1 CDS RB8353 NC_005027.1 4459374 4459622 D hypothetical protein 4459374..4459622 Rhodopirellula baltica SH 1 1795867 NP_868318.1 CDS RB8355 NC_005027.1 4459577 4459735 D hypothetical protein 4459577..4459735 Rhodopirellula baltica SH 1 1792968 NP_868319.1 CDS RB8356 NC_005027.1 4459802 4460011 D hypothetical protein 4459802..4460011 Rhodopirellula baltica SH 1 1790351 NP_868320.1 CDS RB8357 NC_005027.1 4460004 4460174 R hypothetical protein complement(4460004..4460174) Rhodopirellula baltica SH 1 1793900 NP_868321.1 CDS gatC NC_005027.1 4460178 4460453 D PMID: 9342321 best DB hits: BLAST: ddbj:BAB04384.1; (AP001509) glutamyl-tRNA (Gln); E=2e-13 swissprot:O67904; GATC_AQUAE GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE; E=6e-11 swissprot:O06492; GATC_BACSU GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE; E=7e-10 COG: BH0665; COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit; E=2e-14 BS_yerL; COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C; E=8e-11 PA4482; COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit; E=2e-08 PFAM: PF02686; Glu-tRNAGln amidotransferase C su; E=3e-15; glutamyl-tRNA (Gln) amidotransferase subunit C 4460178..4460453 Rhodopirellula baltica SH 1 1795213 NP_868322.1 CDS RB8361 NC_005027.1 4460580 4460726 D hypothetical protein 4460580..4460726 Rhodopirellula baltica SH 1 1795112 NP_868323.1 CDS Pph1 NC_005027.1 4460687 4462144 R PMID: 11298281 best DB hits: BLAST: gb:AAF81068.1; AF223364_3 (AF223364) protein phosphatase 1; E=9e-32 pir:E71538; hypothetical protein CT259 - Chlamydia trachomatis; E=4e-28 pir:H75265; conserved hypothetical protein - Deinococcus radiodurans; E=5e-28 COG: CT259; COG0631 Protein serine/threonine phosphatases; E=4e-29 PFAM: PF00481; Protein phosphatase 2C; E=4.9e-09; protein phosphatase 1 complement(4460687..4462144) Rhodopirellula baltica SH 1 1796410 NP_868324.1 CDS pepT NC_005027.1 4462387 4463592 R PMID: 8978088 best DB hits: BLAST: pir:B82211; peptidase, M20A family VC1343 [imported] - Vibrio; E=1e-34 swissprot:P54542; YQJE_BACSU HYPOTHETICAL 39.7 KD PROTEIN IN; E=2e-32 ddbj:BAB05188.1; (AP001512) BH1469~unknown conserved protein; E=7e-32 COG: VC1343; COG2195 Di- and tripeptidases; E=1e-35 PA5390; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate; E=5e-07 HI1348; COG2195 Di- and tripeptidases; E=5e-06 PFAM: PF01546; Peptidase M20/M25/M40; E=6.8e-20; M20A family peptidase complement(4462387..4463592) Rhodopirellula baltica SH 1 1792976 NP_868325.1 CDS RB8365 NC_005027.1 4463631 4463903 R signal peptide complement(4463631..4463903) Rhodopirellula baltica SH 1 1791574 NP_868326.1 CDS RB8367 NC_005027.1 4463905 4464057 D hypothetical protein 4463905..4464057 Rhodopirellula baltica SH 1 1792178 NP_868327.1 CDS RB8368 NC_005027.1 4464030 4465001 R best DB hits: BLAST: pir:F82221; conserved hypothetical protein VC1259 [imported] -; E=7e-86 pir:D83539; conserved hypothetical protein PA0858 [imported] -; E=4e-81 pir:G75436; conserved hypothetical protein - Deinococcus radiodurans; E=2e-67 COG: VC1259; COG1054 Uncharacterized enzyme related to sulfurtransferases; E=6e-87 sll0765; COG1054 Uncharacterized enzyme related to; E=5e-67 RP125; COG1054 Uncharacterized enzyme related to sulfurtransferases; E=2e-49 PFAM: PF00581; Rhodanese-like domain; E=1.5e-17; hypothetical protein complement(4464030..4465001) Rhodopirellula baltica SH 1 1794927 NP_868328.1 CDS RB8370 NC_005027.1 4465020 4467089 R best DB hits: PFAM: PF00602; Influenza RNA-dependent RNA poly; E=0.35; hypothetical protein complement(4465020..4467089) Rhodopirellula baltica SH 1 1795783 NP_868329.1 CDS guaA NC_005027.1 4467164 4468927 D contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 4467164..4468927 Rhodopirellula baltica SH 1 1794086 NP_868330.1 CDS RB8375 NC_005027.1 4469120 4470799 D ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein 4469120..4470799 Rhodopirellula baltica SH 1 1790461 NP_868331.1 CDS RB8376 NC_005027.1 4470886 4471233 D hypothetical protein 4470886..4471233 Rhodopirellula baltica SH 1 1794023 NP_868332.1 CDS RB8378 NC_005027.1 4471241 4475557 D hypothetical protein 4471241..4475557 Rhodopirellula baltica SH 1 1796549 NP_868333.1 CDS RB8381 NC_005027.1 4475559 4475819 D hypothetical protein 4475559..4475819 Rhodopirellula baltica SH 1 1796026 NP_868334.1 CDS glgP NC_005027.1 4475978 4478470 D PMID: 7916624 PMID: 2424788 best DB hits: BLAST: pir:S77252; phosphorylase (EC 2.4.1.1) 2 - Synechocystis sp. (strain; E=0.0 swissprot:P73511; PHSG_SYNY3 GLYCOGEN PHOSPHORYLASE ----- pir:; E=0.0 gb:AAD30476.1; AF124787_1 (AF124787) muscle glycogen phosphorylase; E=0.0 COG: slr1367; COG0058 Glucan phosphorylase; E=0.0 PFAM: PF00343; Carbohydrate phosphorylase; E=0; phosphorylase 2 4475978..4478470 Rhodopirellula baltica SH 1 1794815 NP_868335.1 CDS insA NC_005027.1 4478623 4479924 D best DB hits: BLAST: gb:AAD45539.1; U70376_1 (U70376) InsA [Streptomyces netropsis]; E=5e-33 gb:AAG60893.1; AF322013_12 (AF322013) ID460 [Bradyrhizobium; E=8e-33 ddbj:BAA19966.1; (D63923) transposase [Acetobacter pasteurianus]; E=1e-26; InsA (transposase) 4478623..4479924 Rhodopirellula baltica SH 1 1794287 NP_868336.1 CDS RB8385 NC_005027.1 4479935 4480087 D hypothetical protein 4479935..4480087 Rhodopirellula baltica SH 1 1795321 NP_868337.1 CDS RB8387 NC_005027.1 4480229 4480744 R hypothetical protein complement(4480229..4480744) Rhodopirellula baltica SH 1 1795364 NP_868338.1 CDS RB8388 NC_005027.1 4480960 4481880 R PMID: 11481431; hypothetical protein complement(4480960..4481880) Rhodopirellula baltica SH 1 1796499 NP_868339.1 CDS RB8389 NC_005027.1 4481915 4484734 R hypothetical protein complement(4481915..4484734) Rhodopirellula baltica SH 1 1791796 NP_868340.1 CDS RB8394 NC_005027.1 4484815 4485939 R hypothetical protein complement(4484815..4485939) Rhodopirellula baltica SH 1 1793302 NP_868341.1 CDS deaD NC_005027.1 4486129 4487310 R PMID: 8472961 PMID: 7836307 PMID: 10452953 PMID: 1901561 best DB hits: BLAST: embl:CAB52498.1; (AJ131519) DEAH-family helicase; E=1e-11 swissprot:P24125; V51K_BPL79 51.5 KD PROTEIN ----- pir: JU0445; E=5e-10 embl:CAB63670.1; (AJ251789) hypothetical protein [Lactobacillus; E=1e-08 COG: VC0812_2; COG1061 DNA or RNA helicases of superfamily II; E=1e-08 DR1624; COG0513 Superfamily II DNA and RNA helicases; E=5e-04 PFAM: PF00270; DEAD/DEAH box helicase; E=0.024 PF00271; Helicase conserved C-terminal doma; E=5.5e-07; DEAH-family helicase complement(4486129..4487310) Rhodopirellula baltica SH 1 1796372 NP_868342.1 CDS uvrB NC_005027.1 4487470 4489596 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(4487470..4489596) Rhodopirellula baltica SH 1 1796164 NP_868343.1 CDS tdk NC_005027.1 4489679 4490314 D catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 4489679..4490314 Rhodopirellula baltica SH 1 1792189 NP_868344.1 CDS rnr NC_005027.1 4490393 4492687 D PMID: 9603904 best DB hits: BLAST: ddbj:BAB07272.1; (AP001519) ribonuclease R [Bacillus halodurans]; E=6e-88 swissprot:O32231; RNR_BACSU RIBONUCLEASE R (RNASE R) (VACB PROTEIN; E=8e-84 gb:AAK05040.1; AE006328_8 (AE006328) ribonuclease [Lactococcus; E=3e-76 COG: BH3553_1; COG0557 Exoribonucleases; E=1e-76 PFAM: PF00773; RNB-like protein; E=2e-87 PF00575; S1 RNA binding domain; E=3.2e-08; ribonuclease R 4490393..4492687 Rhodopirellula baltica SH 1 1797213 NP_868345.1 CDS cobT NC_005027.1 4492899 4493618 D Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 4492899..4493618 Rhodopirellula baltica SH 1 1794882 NP_868346.1 CDS RB8406 NC_005027.1 4493600 4494673 R hypothetical protein complement(4493600..4494673) Rhodopirellula baltica SH 1 1797147 NP_868347.1 CDS RB8407 NC_005027.1 4494700 4495545 R best DB hits: BLAST: pir:T37061; probable secreted protein - Streptomyces coelicolor; E=2e-27 pir:T35483; hypothetical protein SC6C5.12c SC6C5.12c - Streptomyces; E=2e-16 pir:T35506; hypothetical protein SC6E10.19c - Streptomyces; E=9e-11 COG: DR2293; COG3021 Uncharacterized BCR; E=7e-04 PFAM: PF01260; AP endonuclease 1; E=0.88; hypothetical protein complement(4494700..4495545) Rhodopirellula baltica SH 1 1795605 NP_868348.1 CDS RB8409 NC_005027.1 4495547 4495840 D hypothetical protein 4495547..4495840 Rhodopirellula baltica SH 1 1790101 NP_868349.1 CDS RB8410 NC_005027.1 4495746 4496063 D best DB hits: BLAST: embl:CAB57873.1; (AJ132579) coat protein readthrough [Oat golden; E=0.10 embl:CAB57874.1; (AJ132579) coat protein [Oat golden stripe; E=0.10; hypothetical protein 4495746..4496063 Rhodopirellula baltica SH 1 1789970 NP_868350.1 CDS RB8411 NC_005027.1 4496092 4497180 D best DB hits: BLAST: pir:H83475; probable transcriptional regulator PA1359 [imported] -; E=0.067 embl:CAA64677.1; (X95394) aldehyde dehydrogenase-like protein; E=0.52 COG: PA1359; COG1396 Predicted transcriptional regulators; E=0.006 PFAM: PF01381; Helix-turn-helix; E=7.3e-11; transcriptional regulator 4496092..4497180 Rhodopirellula baltica SH 1 1795153 NP_868351.1 CDS RB8414 NC_005027.1 4497128 4498204 R hypothetical protein complement(4497128..4498204) Rhodopirellula baltica SH 1 1796291 NP_868352.1 CDS RB8415 NC_005027.1 4498132 4498758 R best DB hits: PFAM: PF00583; Acetyltransferase (GNAT) family; E=0.72; hypothetical protein complement(4498132..4498758) Rhodopirellula baltica SH 1 1794322 NP_868353.1 CDS RB8417 NC_005027.1 4498883 4498999 D hypothetical protein 4498883..4498999 Rhodopirellula baltica SH 1 1790847 NP_868354.1 CDS priA NC_005027.1 4498986 4501421 R PMID: 9086272 best DB hits: BLAST: swissprot:P94461; PRIA_BACSU PRIMOSOMAL PROTEIN N' (REPLICATION; E=1e-130 embl:CAA71348.1; (Y10304) priA [Bacillus subtilis]; E=1e-123 swissprot:P74397; PRIA_SYNY3 PRIMOSOMAL PROTEIN N' (REPLICATION; E=1e-112 COG: BS_priA; COG1198 Primosomal protein N' (replication factor Y) -; E=1e-131 PFAM: PF00005; ABC transporter; E=0.66 PF01443; Viral (Superfamily 1) RNA hel; E=0.33 PF00271; Helicase conserved C-terminal; E=7.8e-09; primosomal protein N complement(4498986..4501421) Rhodopirellula baltica SH 1 1792559 NP_868355.1 CDS RB8420 NC_005027.1 4501382 4501843 D hypothetical protein 4501382..4501843 Rhodopirellula baltica SH 1 1794407 NP_868356.1 CDS RB8421 NC_005027.1 4501840 4502310 D signal peptide 4501840..4502310 Rhodopirellula baltica SH 1 1791235 NP_868357.1 CDS RB8422 NC_005027.1 4502270 4502428 D hypothetical protein 4502270..4502428 Rhodopirellula baltica SH 1 1794264 NP_868358.1 CDS atsG NC_005027.1 4502421 4504376 R PMID: 9634230 best DB hits: BLAST: pir:F70837; probable sulfatase (EC 3.1.6.-) atsG - Mycobacterium; E=1e-40 gb:AAF55607.1; (AE003724) CG14291 gene product [Drosophila; E=1e-20 gb:AAF29467.1; (AF156255) N-sulfoglucosamine sulfohydrolase [Mus; E=3e-20 COG: Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=1e-41 BH1718; COG1413 Phycocyanin alpha-subunit phycocyanobilin lyase and; E=0.010 PFAM: PF00884; Sulfatase; E=5.2e-22; sulfatase atsG complement(4502421..4504376) Rhodopirellula baltica SH 1 1791047 NP_868359.1 CDS mntH NC_005027.1 4504479 4505753 R PMID: 10844693 PMID: 10712688 best DB hits: BLAST: pir:T44945; hypothetical protein 6 [imported] - Natronobacterium; E=1e-48 swissprot:Q9RPF3; MNT1_PSEAE MANGANESE TRANSPORT PROTEIN MNTH1; E=1e-18 pir:B83105; probable transport protein PA4334 [imported] -; E=1e-18 COG: PA4334; COG1914 Mn2+ and Fe2+ transporters of the NRAMP family; E=1e-19 PFAM: PF01566; Natural resistance-associated macrop; E=0.00026; manganese transport protein mntH1 complement(4504479..4505753) Rhodopirellula baltica SH 1 1794417 NP_868360.1 CDS RB8432 NC_005027.1 4505767 4506624 D best DB hits: BLAST: pir:F70844; probable fusion protein - Mycobacterium tuberculosis; E=1e-07 embl:CAC04235.1; (AL391515) conserved hypothetical protein; E=2e-04 pir:E83611; conserved hypothetical protein PA0269 [imported] -; E=0.020 COG: Rv3327_2; COG2128 Uncharacterized ACR; E=1e-08; fusion protein 4505767..4506624 Rhodopirellula baltica SH 1 1792052 NP_868361.1 CDS RB8434 NC_005027.1 4506660 4506869 D hypothetical protein 4506660..4506869 Rhodopirellula baltica SH 1 1796818 NP_868362.1 CDS cti NC_005027.1 4506842 4509907 D PMID: 98027367 best DB hits: BLAST: embl:CAA04438.1; (AJ000978) cistrans isomerase [Pseudomonas; E=0.030 gb:AAD41252.1; AF110738_2 (AF110738) Cti [Pseudomonas putida]; E=0.030 gb:AAD41255.1; AF110739_2 (AF110739) Cti [Pseudomonas putida]; E=0.030; cis/trans isomerase 4506842..4509907 Rhodopirellula baltica SH 1 1793066 NP_868363.1 CDS RB8440 NC_005027.1 4509914 4511311 D best DB hits: BLAST: gb:AAK03766.1; (AE006204) unknown [Pasteurella multocida]; E=0.72; hypothetical protein 4509914..4511311 Rhodopirellula baltica SH 1 1792214 NP_868364.1 CDS RB8441 NC_005027.1 4511315 4514038 R PMID: 87307953 best DB hits: BLAST: pir:I39942; penicillinase antirepressor penJ - Bacillus; E=1e-07 swissprot:P12287; BLAR_BACLI REGULATORY PROTEIN BLAR1 -----; E=2e-07; penicillinase antirepressor penJ complement(4511315..4514038) Rhodopirellula baltica SH 1 1795305 NP_868365.1 CDS RB8445 NC_005027.1 4514050 4514475 R best DB hits: BLAST: pir:S74550; hypothetical protein slr0240 - Synechocystis sp. (strain; E=2e-07 swissprot:Q47839; COPY_ENTHR COPAB ATPASES METAL-FIST TYPE; E=0.047 swissprot:O07127; YPTY_LACSK HYPOTHETICAL 16.5 KD PROTEIN IN PTSI; E=0.13; hypothetical protein complement(4514050..4514475) Rhodopirellula baltica SH 1 1797070 NP_868366.1 CDS RB8448 NC_005027.1 4514588 4514986 D hypothetical protein 4514588..4514986 Rhodopirellula baltica SH 1 1790616 NP_868367.1 CDS RB8450 NC_005027.1 4514838 4516724 D best DB hits: BLAST: pir:S75290; hypothetical protein sll1289 - Synechocystis sp. (strain; E=0.007 pir:G70687; hypothetical protein Rv1732c - Mycobacterium; E=0.037 ddbj:BAB05296.1; (AP001512) cytochrome c biogenesis (thioredoxin); E=0.53 COG: sll1289; COG0526 Thiol-disulfide isomerase and thioredoxins; E=7e-04; hypothetical protein 4514838..4516724 Rhodopirellula baltica SH 1 1795567 NP_868368.1 CDS nadD NC_005027.1 4516833 4517477 D PMID: 10894752 best DB hits: BLAST: swissprot:O66452; NADD_AQUAE PROBABLE NICOTINATE-NUCLEOTIDE; E=2e-23 swissprot:P52085; NADD_ECOLI NICOTINATE-NUCLEOTIDE; E=7e-23 gb:AAG54973.1; AE005243_2 (AE005243) orf, hypothetical protein; E=1e-22 COG: aq_036; COG1057 Nicotinic acid mononucleotide adenylyltransferase; E=2e-24; nicotinate-nucleotide adenylyltransferase 4516833..4517477 Rhodopirellula baltica SH 1 1791133 NP_868369.1 CDS RB8456 NC_005027.1 4517483 4518115 D best DB hits: BLAST: swissprot:P72873; Y925_SYNY3 HYPOTHETICAL 23.0 KD PROTEIN sll0925; E=3e-25 gb:AAC26156.1; (AF035751) hypothetical protein [Synechococcus sp.; E=2e-24 swissprot:P72821; YC90_SYNY3 HYPOTHETICAL 21.6 KD PROTEIN SLR1290; E=5e-24; hypothetical protein 4517483..4518115 Rhodopirellula baltica SH 1 1791240 NP_868370.1 CDS RB8457 NC_005027.1 4518117 4518458 R hypothetical protein complement(4518117..4518458) Rhodopirellula baltica SH 1 1796332 NP_868371.1 CDS rpsR NC_005027.1 4518496 4518663 D PMID: 6806564 best DB hits: BLAST: swissprot:P21475; RS18_BACSU 30S RIBOSOMAL PROTEIN S18 (BS21); E=1e-08 pir:S66013; ribosomal protein S18 (rpsR) - Bacillus subtilis; E=1e-08 pir:R3BS18; ribosomal protein S18 - Bacillus stearothermophilus; E=1e-08 COG: BS_rpsR; COG0238 Ribosomal protein S18; E=1e-09 PFAM: PF01084; Ribosomal protein S18; E=2e-16; 30S ribosomal protein S18 4518496..4518663 Rhodopirellula baltica SH 1 1791242 NP_868372.1 CDS RB8462 NC_005027.1 4518681 4519142 D PMID: 9837940 best DB hits: BLAST: ddbj:BAB05718.1; (AP001514) 4-hydroxybenzoyl-CoA thioesterase; E=3e-07 swissprot:O67466; YE94_AQUAE HYPOTHETICAL PROTEIN AQ_1494 -----; E=6e-06 pir:B83525; conserved hypothetical protein PA0968 [imported] -; E=7e-06 COG: BH1999; COG0824 Predicted thioesterase; E=3e-08; 4-hydroxybenzoyl-CoA thioesterase 4518681..4519142 Rhodopirellula baltica SH 1 1793163 NP_868373.1 CDS RB8463 NC_005027.1 4519130 4519675 R hypothetical protein complement(4519130..4519675) Rhodopirellula baltica SH 1 1792677 NP_868374.1 CDS RB8464 NC_005027.1 4519151 4519621 D hypothetical protein 4519151..4519621 Rhodopirellula baltica SH 1 1790833 NP_868375.1 CDS fur NC_005027.1 4519682 4520236 R PMID: 8083178 PMID: 7590316 PMID: 9765558 best DB hits: BLAST: pir:B70423; transcriptional regulator FurR family - Aquifex aeolicus; E=2e-15 swissprot:P48796; FUR_CAMJE FERRIC UPTAKE REGULATION PROTEIN; E=7e-13 swissprot:Q51008; FUR_NEIGO FERRIC UPTAKE REGULATION PROTEIN; E=8e-13 COG: aq_1418; COG0735 Fe2+/Zn2+ uptake regulation proteins; E=2e-16 PFAM: PF01475; Ferric uptake regulator family; E=1.5e-22; FurR family transcriptional regulator complement(4519682..4520236) Rhodopirellula baltica SH 1 1795678 NP_868376.1 CDS csyQ NC_005027.1 4520533 4520799 R best DB hits: BLAST: swissprot:P46726; CYSQ_MYCLE CYSQ PROTEIN HOMOLOG ----- pir:; E=0.66; 3'-phosphoadenosine 5'-phosphosulfate 3'-phosphatase complement(4520533..4520799) Rhodopirellula baltica SH 1 1790968 NP_868377.1 CDS odc NC_005027.1 4520779 4521975 D PMID: 20528325 best DB hits: BLAST: ddbj:BAA24923.1; (AB011029) lysineornithine decarboxylase; E=5e-59 ddbj:BAA83427.1; (AB031066) ornithine decarboxylase [Nicotiana; E=1e-46 pir:T03035; ornithine decarboxylase (EC 4.1.1.17) - common tobacco; E=1e-46 COG: aq_728; COG0019 Diaminopimelate decarboxylase; E=8e-44 PFAM: PF02784; Pyridoxal-dependent decarboxy; E=4e-55 PF00278; Pyridoxal-dependent decarboxy; E=1.8e-17; lysine/ornithine decarboxylase 4520779..4521975 Rhodopirellula baltica SH 1 1790335 NP_868378.1 CDS cht1 NC_005027.1 4521990 4523444 D best DB hits: BLAST: gb:AAG36945.1; (AF276872) sodium and chloride-dependent; E=8e-26 embl:CAC03719.1; (AJ401467) high affinity choline transporter; E=1e-25 ddbj:BAA90484.1; (AB030947) high-affinity choline transporter; E=2e-25 COG: PA1418; COG0591 Na+/proline, Na+/panthothenate symporters and; E=7e-20 panF; COG0591 Na+/proline, Na+/panthothenate symporters and related; E=3e-10 PFAM: PF00474; Sodium:solute symporter family; E=4.5e-05; high affinity choline transporter 4521990..4523444 Rhodopirellula baltica SH 1 1794679 NP_868379.1 CDS RB8473 NC_005027.1 4523410 4523535 D hypothetical protein 4523410..4523535 Rhodopirellula baltica SH 1 1797153 NP_868380.1 CDS RB8474 NC_005027.1 4523554 4524096 R hypothetical protein complement(4523554..4524096) Rhodopirellula baltica SH 1 1794510 NP_868381.1 CDS ppiC NC_005027.1 4524113 4524394 R PMID: 7925971 PMID: 8163020 best DB hits: BLAST: pir:C83123; peptidyl-prolyl cis-trans isomerase C2 PA4176; E=5e-28 gb:AAG33124.1; AF247689_1 (AF247689) parvulin; E=1e-22 gb:AAG33121.1; AF247686_1 (AF247686) parvulin; E=1e-22 COG: PA4176; COG0760 Parvulin-like peptidyl-prolyl isomerase; E=6e-29 PFAM: PF00639; PPIC-type PPIASE domain.; E=3.1e-24; peptidyl-prolyl cis-trans isomerase C2 complement(4524113..4524394) Rhodopirellula baltica SH 1 1791852 NP_868382.1 CDS RB8478 NC_005027.1 4524334 4524759 R hypothetical protein complement(4524334..4524759) Rhodopirellula baltica SH 1 1794267 NP_868383.1 CDS RB8479 NC_005027.1 4524840 4526150 D signal peptide 4524840..4526150 Rhodopirellula baltica SH 1 1790645 NP_868384.1 CDS psd NC_005027.1 4526206 4527162 D PMID: 3042771 PMID: 2406271 PMID: 1495415 best DB hits: BLAST: pir:F72029; phosphatidylserine decarboxylase (EC 4.1.1.65) precursor; E=3e-65 pir:D81745; probable phosphatidylserine decarboxylase (EC 4.1.1.65); E=7e-65 pir:E71482; phosphatidylserine decarboxylase (EC 4.1.1.65) precursor; E=9e-61 COG: CPn0839; COG0688 Phosphatidylserine decarboxylase; E=3e-66 PFAM: PF02666; Phosphatidylserine decarboxyla; E=1.9e-61; phosphatidylserine decarboxylase precursor 4526206..4527162 Rhodopirellula baltica SH 1 1796425 NP_868385.1 CDS RB8484 NC_005027.1 4527287 4527634 D best DB hits: BLAST: pir:T35585; hypothetical protein SC6G4.34 - Streptomyces coelicolor; E=4e-08 embl:CAB88460.1; (AL353815) hypothetical protein SCD6.31c; E=8e-05 pir:C83475; hypothetical protein PA1354 [imported] - Pseudomonas; E=0.002; hypothetical protein 4527287..4527634 Rhodopirellula baltica SH 1 1794456 NP_868386.1 CDS RB8485 NC_005027.1 4527631 4528884 D best DB hits: BLAST: pir:T35586; hypothetical protein SC6G4.35 SC6G4.35 - Streptomyces; E=2e-47 pir:G83477; probable sigma-70 factor, ECF subfamily PA1351; E=8e-45 swissprot:Q52997; YDNY_RHIME HYPOTHETICAL 47.0 KDA PROTEIN IN DNAA; E=1e-35 COG: PA1351_1; COG1595 DNA-directed RNA polymerase specialized sigma; E=2e-17; ECF subfamily RNA polymerase sigma-70 factor 4527631..4528884 Rhodopirellula baltica SH 1 1793965 NP_868387.1 CDS RB8487 NC_005027.1 4528983 4530158 R signal peptide complement(4528983..4530158) Rhodopirellula baltica SH 1 1795214 NP_868388.1 CDS RB8490 NC_005027.1 4530305 4530841 D hypothetical protein 4530305..4530841 Rhodopirellula baltica SH 1 1794079 NP_868389.1 CDS sigW NC_005027.1 4530812 4531447 R PMID: 8432708 best DB hits: BLAST: swissprot:Q45585; SIGW_BACSU RNA POLYMERASE SIGMA FACTOR SIGW; E=3e-23 gb:AAF18265.1; U22895_1 (U22895) alternative sigma factor AlgU; E=6e-18 ddbj:BAB03982.1; (AP001507) RNA polymerase ECF-type sigma factor; E=2e-17 COG: BS_sigW; COG1595 DNA-directed RNA polymerase specialized sigma; E=3e-24 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=9.9e-15; RNA polymerase sigma factor sigW complement(4530812..4531447) Rhodopirellula baltica SH 1 1797163 NP_868390.1 CDS RB8494 NC_005027.1 4531481 4532854 R best DB hits: BLAST: pir:A75321; prepilin peptidase, type IV - Deinococcus radiodurans; E=4e-16 swissprot:P72640; LEP4_SYNY3 TYPE 4 PREPILIN-LIKE PROTEINS LEADER; E=3e-15 ddbj:BAA83726.1; (AB017809) prepilin peptidase [Escherichia coli]; E=3e-14 COG: DR2065; COG1989 Signal peptidase, cleaves prepilin-like proteins; E=4e-17 PFAM: PF01478; Type III leader peptidase famil; E=8.9e-28; prepilin peptidase, type IV complement(4531481..4532854) Rhodopirellula baltica SH 1 1793093 NP_868391.1 CDS phr NC_005027.1 4532893 4534416 D PMID: 7813451 PMID: 2668276 best DB hits: BLAST: swissprot:P12769; PHR_METTH DEOXYRIBODIPYRIMIDINE PHOTOLYASE (DNA; E=3e-58 gb:AAF81696.1; AF246697_1 (AF246697) CPD-photolyase [Fowlpox; E=1e-54 swissprot:P34205; PHR_CARAU DEOXYRIBODIPYRIMIDINE PHOTOLYASE (DNA; E=6e-54 COG: MTH904; COG0415 Deoxyribodipyrimidine photolyase; E=3e-59 PFAM: PF00875; DNA photolyase; E=0.0034; deoxyribodipyrimidine photolyase 4532893..4534416 Rhodopirellula baltica SH 1 1791360 NP_868392.1 CDS RB8499 NC_005027.1 4534503 4535069 R hypothetical protein complement(4534503..4535069) Rhodopirellula baltica SH 1 1790044 NP_868393.1 CDS RB8500 NC_005027.1 4535044 4535367 R hypothetical protein complement(4535044..4535367) Rhodopirellula baltica SH 1 1796084 NP_868394.1 CDS RB8501 NC_005027.1 4535391 4536536 D PMID: 99397451 best DB hits: BLAST: ddbj:BAB09588.1; (AB018118) gene_id:MRI1.6~pir D64592~similar to; E=5e-46 gb:AAG35309.1; AF274868_1 (AF274868) sialidase NanB [Pasteurella; E=0.050 pir:D64592; hypothetical protein HP0580 - Helicobacter pylori; E=0.42 PFAM: PF02012; BNR repeat; E=0.88; hypothetical protein 4535391..4536536 Rhodopirellula baltica SH 1 1790886 NP_868395.1 CDS RB8503 NC_005027.1 4536479 4536637 R hypothetical protein complement(4536479..4536637) Rhodopirellula baltica SH 1 1792589 NP_868396.1 CDS RB8504 NC_005027.1 4536661 4536996 R hypothetical protein complement(4536661..4536996) Rhodopirellula baltica SH 1 1795787 NP_868397.1 CDS RB8505 NC_005027.1 4537127 4538446 R best DB hits: BLAST: pir:H69064; serinethreonine protein kinase related protein -; E=4e-04 swissprot:P77774; YFGL_ECOLI HYPOTHETICAL 41.9 KD PROTEIN IN; E=0.004 gb:AAG20856.1; (AE005154) Vng6189h [Halobacterium sp. NRC-1]; E=0.007 COG: MTH1485; COG1520 Uncharacterized proteins of WD40-like repeat family; E=4e-05 PFAM: PF01011; PQQ enzyme repeat; E=0.03; serine/threonine protein kinase related protein complement(4537127..4538446) Rhodopirellula baltica SH 1 1791926 NP_868398.1 CDS RB8507 NC_005027.1 4538454 4538720 R hypothetical protein complement(4538454..4538720) Rhodopirellula baltica SH 1 1791822 NP_868399.1 CDS RB8509 NC_005027.1 4538651 4539046 D hypothetical protein 4538651..4539046 Rhodopirellula baltica SH 1 1790987 NP_868400.1 CDS hom NC_005027.1 4539096 4540442 R PMID: 1333566 best DB hits: BLAST: pir:F69031; homoserine dehydrogenase (EC 1.1.1.3) - Methanobacterium; E=4e-81 gb:AAF21129.1; L78665_3 (L78665) homoserine dehydrogenase; E=2e-80 swissprot:P29365; DHOM_PSEAE HOMOSERINE DEHYDROGENASE (HDH); E=1e-77 COG: MTH1232; COG0460 Homoserine dehydrogenase; E=4e-82 PFAM: PF02737; 3-hydroxyacyl-CoA dehydrogenase; E=0.85 PF02254; KTN NAD-binding domain; E=0.19 PF01408; Oxidoreductase, NAD-bind; E=0.73; homoserine dehydrogenase complement(4539096..4540442) Rhodopirellula baltica SH 1 1791846 NP_868401.1 CDS RB8511 NC_005027.1 4540419 4540760 D hypothetical protein 4540419..4540760 Rhodopirellula baltica SH 1 1790604 NP_868402.1 CDS RB8512 NC_005027.1 4540573 4540812 R hypothetical protein complement(4540573..4540812) Rhodopirellula baltica SH 1 1797191 NP_868403.1 CDS RB8513 NC_005027.1 4540912 4541316 D hypothetical protein 4540912..4541316 Rhodopirellula baltica SH 1 1795120 NP_868404.1 CDS yqjH NC_005027.1 4541316 4542917 D best DB hits: BLAST: swissprot:P54545; YQJH_BACSU HYPOTHETICAL 47.0 KD PROTEIN IN; E=0.15 PFAM: PF00817; impB/mucB/samB family; E=0.87; hypothetical protein 4541316..4542917 Rhodopirellula baltica SH 1 1792828 NP_868405.1 CDS RB8516 NC_005027.1 4542940 4545015 R PMID: 10984043 best DB hits: BLAST: pir:D83024; probable secretion protein PA4974 [imported] -; E=0.28 pir:A82540; outer membrane export factor XF2586 [imported] - Xylella; E=0.31 pir:B83071; hypothetical protein PA4592 [imported] - Pseudomonas; E=0.45 PFAM: PF02321; Outer membrane efflux protein; E=8.2e-07; secretion protein complement(4542940..4545015) Rhodopirellula baltica SH 1 1790803 NP_868406.1 CDS RB8518 NC_005027.1 4543984 4545096 D best DB hits: PFAM: PF00559; Retroviral Vif (Viral infectivity) p; E=0.47; signal peptide 4543984..4545096 Rhodopirellula baltica SH 1 1793998 NP_868407.1 CDS RB8519 NC_005027.1 4545120 4546163 R hypothetical protein complement(4545120..4546163) Rhodopirellula baltica SH 1 1796085 NP_868408.1 CDS RB8520 NC_005027.1 4546045 4546170 D hypothetical protein 4546045..4546170 Rhodopirellula baltica SH 1 1795507 NP_868409.1 CDS RB8522 NC_005027.1 4546213 4547121 D best DB hits: BLAST: embl:CAB76071.1; (AL157953) rRNA methylase [Streptomyces; E=1e-22 swissprot:Q10543; Y881_MYCTU HYPOTHETICAL TRNARRNA; E=7e-18 pir:C82904; rRNA methylase UU327 [imported] - Ureaplasma urealyticum; E=3e-14 COG: Rv0881; COG0566 rRNA methylases; E=7e-19 PFAM: PF00588; SpoU rRNA Methylase; E=2.6e-26; rRNA methylase 4546213..4547121 Rhodopirellula baltica SH 1 1796407 NP_868410.1 CDS lcfA NC_005027.1 4547108 4548595 D PMID: 8969504 best DB hits: BLAST: pir:E71667; 2-acylglycerophosphoethanolamine acyltransferase (aas); E=6e-18 gb:AAG19674.1; (AE005055) Vng1339c [Halobacterium sp. NRC-1]; E=5e-17 pir:A69831; probable acid--CoA ligase (EC 6.2.1.-) yhfL [similarity]; E=8e-17 COG: RP620_3; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases; E=5e-19 VNG1339C; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid; E=5e-18 BS_yhfL; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases; E=7e-18 PFAM: PF00501; AMP-binding enzyme; E=1.3e-08 PF01781; Ribosomal L38e protein family; E=0.56; 2-acylglycerophosphoethanolamine acyltransferase (aas) 4547108..4548595 Rhodopirellula baltica SH 1 1791499 NP_868411.1 CDS RB8526 NC_005027.1 4548811 4549104 R hypothetical protein complement(4548811..4549104) Rhodopirellula baltica SH 1 1793973 NP_868412.1 CDS RB8527 NC_005027.1 4549097 4550089 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein 4549097..4550089 Rhodopirellula baltica SH 1 1793118 NP_868413.1 CDS RB8528 NC_005027.1 4550184 4550294 D hypothetical protein 4550184..4550294 Rhodopirellula baltica SH 1 1792315 NP_868414.1 CDS RB8529 NC_005027.1 4550288 4550716 D signal peptide 4550288..4550716 Rhodopirellula baltica SH 1 1793071 NP_868415.1 CDS RB8530 NC_005027.1 4550725 4550886 R best DB hits: BLAST: pir:D64585; cag pathogenicity island protein cag5 - Helicobacter; E=0.63 pir:F71927; cag island protein, DNA transfer protein - Helicobacter; E=0.63 gb:AAF80195.1; AF282852_5 (AF282852) Cag-beta [Helicobacter; E=0.63; cag pathogenicity island protein cag5 complement(4550725..4550886) Rhodopirellula baltica SH 1 1796063 NP_868416.1 CDS tatC NC_005027.1 4550911 4552125 R PMID: 9649434 PMID: 9546395 best DB hits: BLAST: swissprot:O05523; YDIJ_BACSU HYPOTHETICAL 29.1 KDA PROTEIN IN; E=4e-18 swissprot:Q9ZM59; TATC_HELPJ SEC-INDEPENDENT PROTEIN TRANSLOCASE; E=6e-18 swissprot:Q9ZCG6; TATC_RICPR SEC-INDEPENDENT PROTEIN TRANSLOCASE; E=7e-18 COG: BS_ydiJ; COG0805 Sec-independent protein secretion pathway component; E=4e-19 VNG2267G; COG0805 Sec-independent protein secretion pathway; E=9e-06 PFAM: PF00902; MttB family UPF0032; E=4.5e-35; Sec-independent protein translocase tatC-like protein complement(4550911..4552125) Rhodopirellula baltica SH 1 1795812 NP_868417.1 CDS pfpI NC_005027.1 4552172 4552762 D best DB hits: BLAST: pir:H75163; intracellular proteinase (pfpi) PAB0311 - Pyrococcus; E=1e-30 pir:F72722; hypothetical protein APE0319 - Aeropyrum pernix (strain; E=4e-30 gb:AAB89965.1; (AE001016) intracellular protease (pfpI); E=2e-29 COG: PAB0311; COG0693 intracellular protease/amidase; E=1e-31 PFAM: PF01965; ThiJ/PfpI family; E=1.1e-39; intracellular proteinase pfpI 4552172..4552762 Rhodopirellula baltica SH 1 1790653 NP_868418.1 CDS RB8534 NC_005027.1 4552802 4552930 D hypothetical protein 4552802..4552930 Rhodopirellula baltica SH 1 1794195 NP_868419.1 CDS RB8535 NC_005027.1 4552942 4553163 R hypothetical protein complement(4552942..4553163) Rhodopirellula baltica SH 1 1795259 NP_868420.1 CDS RB8536 NC_005027.1 4553098 4554066 D hypothetical protein 4553098..4554066 Rhodopirellula baltica SH 1 1796928 NP_868421.1 CDS RB8538 NC_005027.1 4554117 4554302 R hypothetical protein complement(4554117..4554302) Rhodopirellula baltica SH 1 1794724 NP_868422.1 CDS argA NC_005027.1 4554349 4554768 D best DB hits: BLAST: pir:A70418; conserved hypothetical protein aq_1359 - Aquifex; E=2e-08 pir:H75488; conserved hypothetical protein - Deinococcus radiodurans; E=5e-08 pir:B81033; N-acetylglutamate synthase NMB1876 [imported] -; E=9e-07 COG: aq_1359; COG1246 N-acetylglutamate synthase and related; E=2e-09 PFAM: PF00583; Acetyltransferase (GNAT) family; E=6e-15; N-acetylglutamate synthase 4554349..4554768 Rhodopirellula baltica SH 1 1791940 NP_868423.1 CDS celM NC_005027.1 4554758 4555831 D best DB hits: BLAST: pir:E75542; probable endoglucanase - Deinococcus radiodurans (strain; E=6e-48 gb:AAG19796.1; (AE005064) endoglucanase; CelM [Halobacterium sp.; E=2e-47 pir:A69157; endo-1,4-beta-glucanase - Methanobacterium; E=8e-47 COG: DR0229; COG1363 Cellulase M and related proteins; E=6e-49; endoglucanase 4554758..4555831 Rhodopirellula baltica SH 1 1791642 NP_868424.1 CDS pyrH NC_005027.1 4556001 4557038 R PMID: 9576794 best DB hits: BLAST: swissprot:O04905; UMPK_ARATH URIDYLATE KINASE (UK) (URIDINE; E=1e-30 pir:T47842; URIDYLATE KINASE-like protein - Arabidopsis thaliana; E=9e-30 gb:AAB27365.1; UMP kinase [Saccharomyces cerevisiae, Peptide, 204; E=1e-29 COG: YKL024c; COG0563 Adenylate kinase and related kinases; E=1e-30 PFAM: PF00406; Adenylate kinase; E=2.6e-39; uridylate kinase complement(4556001..4557038) Rhodopirellula baltica SH 1 1796439 NP_868425.1 CDS alaS NC_005027.1 4557105 4559942 R PMID: 7005898 PMID: 7025207 PMID: 6256345 best DB hits: BLAST: pir:H83533; alanyl-tRNA synthetase PA0903 [imported] - Pseudomonas; E=1e-132 swissprot:O67323; SYA_AQUAE ALANYL-TRNA SYNTHETASE (ALANINE--TRNA; E=1e-130 pir:F75289; alanyl-tRNA synthetase - Deinococcus radiodurans (strain; E=1e-129 COG: PA0903; COG0013 Alanyl-tRNA synthetase; E=1e-133 PFAM: PF01411; tRNA synthetases class II (A); E=2.8e-255 PF02272; DHHA1 domain; E=5.4e-20; alanyl-tRNA synthetase complement(4557105..4559942) Rhodopirellula baltica SH 1 1791568 NP_868426.1 CDS RB8546 NC_005027.1 4559942 4560166 R hypothetical protein complement(4559942..4560166) Rhodopirellula baltica SH 1 1795733 NP_868427.1 CDS RB8547 NC_005027.1 4560165 4561271 D best DB hits: BLAST: pir:F65012; hypothetical protein b2385 - Escherichia coli (strain; E=1e-55 gb:AAG57511.1; AE005469_11 (AE005469) peptidase; E=1e-53 pir:D75419; proline dipeptidase - Deinococcus radiodurans (strain; E=1e-49 COG: ypdF; COG0006 Xaa-Pro aminopeptidase; E=1e-56 PFAM: PF00557; metallopeptidase M24; E=2.9e-50; peptidase 4560165..4561271 Rhodopirellula baltica SH 1 1794684 NP_868428.1 CDS accB NC_005027.1 4561336 4561863 D PMID: 7592499 best DB hits: BLAST: pir:H69580; acetyl-CoA carboxylase (biotin carboxyl carrier subunit); E=1e-18 gb:AAB00182.1; (U36245) biotin carboxyl carrier protein [Bacillus; E=1e-17 swissprot:P49786; BCCP_BACSU BIOTIN CARBOXYL CARRIER PROTEIN OF; E=1e-17 COG: BS_accB; COG0511 Biotin carboxyl carrier protein of acetyl-CoA; E=1e-19 PFAM: PF00364; Biotin-requiring enzyme; E=1.5e-25; acetyl-CoA carboxylase (biotin carboxyl carrier subunit) accB 4561336..4561863 Rhodopirellula baltica SH 1 1792160 NP_868429.1 CDS accC NC_005027.1 4561867 4563219 D PMID: 8102363 best DB hits: BLAST: gb:AAB88214.1; (U59234) biotin carboxylase [Synechococcus sp. PCC; E=1e-139 swissprot:Q06862; ACCC_ANASP BIOTIN CARBOXYLASE (A SUBUNIT OF; E=1e-138 pir:S74380; biotin carboxylase accC - Synechocystis sp. (strain PCC; E=1e-136 COG: sll0053; COG0439 Biotin carboxylase; E=1e-137 PFAM: PF00289; Carbamoyl-phosphate synthase L; E=5.1e-48 PF02786; Carbamoyl-phosphate synthase L; E=1.4e-100 PF02785; Biotin carboxylase C-terminal; E=2.7e-58; biotin carboxylase 4561867..4563219 Rhodopirellula baltica SH 1 1790969 NP_868430.1 CDS hpnA NC_005027.1 4563289 4564425 D best DB hits: BLAST: embl:CAA04730.1; (AJ001401) HpnA protein [Zymomonas mobilis]; E=3e-17 swissprot:P73212; DFRA_SYNY3 DIHYDROFLAVONOL-4-REDUCTASE; E=1e-13 pir:C83067; hypothetical protein PA4631 [imported] - Pseudomonas; E=3e-12 COG: slr1706; COG0451 Nucleoside-diphosphate-sugar epimerases; E=1e-14 PFAM: PF01370; NAD dependent epimerase/dehydra; E=0.51 PF01073; 3-beta hydroxysteroid dehydroge; E=1.6e-06; HpnA protein 4563289..4564425 Rhodopirellula baltica SH 1 1791119 NP_868431.1 CDS RB8552 NC_005027.1 4564021 4564509 R signal peptide complement(4564021..4564509) Rhodopirellula baltica SH 1 1794386 NP_868432.1 CDS sigW NC_005027.1 4564556 4565191 D best DB hits: BLAST: embl:CAC17654.1; (AL450450) ECF sigma factor; E=0.003 ddbj:BAB03982.1; (AP001507) RNA polymerase ECF-type sigma; E=0.005 swissprot:Q45585; SIGW_BACSU RNA POLYMERASE SIGMA FACTOR SIGW; E=0.005 COG: BH0263; COG1595 DNA-directed RNA polymerase specialized sigma; E=4e-04 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=5.2e-10; ECF sigma factor 4564556..4565191 Rhodopirellula baltica SH 1 1796357 NP_868433.1 CDS pkn2 NC_005027.1 4565184 4566725 D PMID: 7774814 best DB hits: BLAST: pir:B70936; probable serinethreonine-specific protein kinase (EC; E=3e-31 embl:CAA18685.1; (AL022602) serinethreonine protein; E=5e-31 ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=6e-30 COG: Rv2176; COG0515 Serine/threonine protein kinases; E=3e-32 PFAM: PF00069; Protein kinase domain; E=1.2e-49; serine/threonine-specific protein kinase 2 4565184..4566725 Rhodopirellula baltica SH 1 1793675 NP_868434.1 CDS RB8557 NC_005027.1 4566722 4568275 D best DB hits: BLAST: pir:G82380; hypothetical protein VCA1075 [imported] - Vibrio; E=0.50; hypothetical protein 4566722..4568275 Rhodopirellula baltica SH 1 1793972 NP_868435.1 CDS RB8559 NC_005027.1 4568305 4568877 R signal peptide complement(4568305..4568877) Rhodopirellula baltica SH 1 1795056 NP_868436.1 CDS RB8561 NC_005027.1 4568962 4570281 R hypothetical protein complement(4568962..4570281) Rhodopirellula baltica SH 1 1796068 NP_868437.1 CDS pgm NC_005027.1 4570281 4571912 R catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase complement(4570281..4571912) Rhodopirellula baltica SH 1 1792126 NP_868438.1 CDS glbN NC_005027.1 4572043 4572426 R PMID: 10500158 PMID: 10636862 best DB hits: BLAST: swissprot:Q10784; GLBN_MYCTU HEMOGLOBIN HBN ----- pir: C70761; E=2e-18 gb:AAA29446.2; (M57542) hemoglobin major component [Paramecium; E=3e-09 swissprot:P15160; GLB_PARCA MYOGLOBIN (HEMOGLOBIN) ----- pir:; E=2e-08 COG: Rv1542c; COG2346 Hemoglobin-like proteins; E=2e-19 PFAM: PF01152; Protozoan/cyanobacterial globin; E=5.3e-25; hemoglobin-like protein HbN complement(4572043..4572426) Rhodopirellula baltica SH 1 1793507 NP_868439.1 CDS iolI NC_005027.1 4572448 4573365 R PMID: 7952181 best DB hits: BLAST: swissprot:P42419; IOLI_BACSU IOLI PROTEIN ----- pir: A69646; E=0.026 COG: BS_iolI; COG1082 Predicted endonucleases; E=0.002; xylose isomerase complement(4572448..4573365) Rhodopirellula baltica SH 1 1792956 NP_868440.1 CDS RB8568 NC_005027.1 4573453 4575297 R hypothetical protein complement(4573453..4575297) Rhodopirellula baltica SH 1 1792881 NP_868441.1 CDS RB8572 NC_005027.1 4575518 4575709 R hypothetical protein complement(4575518..4575709) Rhodopirellula baltica SH 1 1796310 NP_868442.1 CDS RB8573 NC_005027.1 4575565 4575681 R hypothetical protein complement(4575565..4575681) Rhodopirellula baltica SH 1 1795448 NP_868443.1 CDS RB8574 NC_005027.1 4575727 4576830 R best DB hits: BLAST: pir:E75284; conserved hypothetical protein - Deinococcus radiodurans; E=1e-36 gb:AAK05795.1; AE006400_5 (AE006400) conserved hypothetical; E=1e-35 pir:T50502; hypothetical protein T22D6.110 - Arabidopsis thaliana; E=7e-34 COG: DR2359; COG2957 Peptidylarginine deiminase and related enzymes; E=1e-37; peptidylarginine deiminase or related enzyme complement(4575727..4576830) Rhodopirellula baltica SH 1 1790551 NP_868444.1 CDS RB8576 NC_005027.1 4576842 4577132 R hypothetical protein complement(4576842..4577132) Rhodopirellula baltica SH 1 1797164 NP_868445.1 CDS RB8580 NC_005027.1 4577393 4577734 D best DB hits: BLAST: pir:B53373; hypothetical protein 1 (rpoN 3' region) - Pseudomonas; E=0.004 pir:G82065; probable sigma-54 modulation protein VC2530 [imported]; E=0.005 swissprot:P17160; RP5M_AZOVI PROBABLE SIGMA(54) MODULATION; E=0.007 COG: VC2530; COG1544 Ribosome-associated protein Y (PSrp-1); E=5e-04 PFAM: PF02482; Sigma 54 modulation protein / S; E=0.0074; sigma-54 modulation protein 4577393..4577734 Rhodopirellula baltica SH 1 1790217 NP_868446.1 CDS fruA NC_005027.1 4577819 4578298 D best DB hits: BLAST: ddbj:BAB04547.1; (AP001510) PTS system, fructose-specific enzyme; E=6e-19 gb:AAK05057.1; AE006330_5 (AE006330) fructose-specific PTS system; E=9e-18 ddbj:BAB03332.1; (AB035450) fructose specific permease; E=1e-16 COG: BH0828_1; COG1762 Phosphotransferase system; E=3e-19 TP0085; COG1762 Phosphotransferase system mannitol/fructose-specific; E=5e-16 NMB0736; COG1762 Phosphotransferase system; E=7e-14 PFAM: PF00359; Phosphoenolpyruvate-dependent suga; E=3.6e-13; PTS system, fructose-specific enzyme II, BC component 4577819..4578298 Rhodopirellula baltica SH 1 1796260 NP_868447.1 CDS ptsH NC_005027.1 4578438 4578785 D PMID: 9172326 best DB hits: BLAST: swissprot:O83598; PTHP_TREPA PHOSPHOCARRIER PROTEIN HPR; E=8e-11 pir:D69607; catabolite repression protein crh [validated] -; E=1e-09 embl:CAB10076.1; (Z97203) histidine containing protein; E=2e-09 COG: TP0589; COG1925 Phosphotransferase system, HPr-related proteins; E=9e-12 PFAM: PF00381; PTS HPr component phosphorylation si; E=5.8e-25; phosphocarrier protein HPr 4578438..4578785 Rhodopirellula baltica SH 1 1795816 NP_868448.1 CDS RB8590 NC_005027.1 4578825 4579148 D hypothetical protein 4578825..4579148 Rhodopirellula baltica SH 1 1791315 NP_868449.1 CDS ptsI NC_005027.1 4579130 4580950 D PMID: 7670643 best DB hits: BLAST: swissprot:P42014; PT1_BACST PHOSPHOENOLPYRUVATE-PROTEIN; E=1e-108 swissprot:O83018; PT1_BACSP PHOSPHOENOLPYRUVATE-PROTEIN; E=1e-108 ddbj:BAB06792.1; (AP001517) PTS system, enzyme I [Bacillus; E=1e-106 COG: BH3073; COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI; E=1e-107 PFAM: PF00391; PEP-utilizing enzyme, mobile; E=4e-21 PF02896; PEP-utilizing enzyme, TIM bar; E=1.4e-115; phosphoenolpyruvate-protein phosphotransferase 4579130..4580950 Rhodopirellula baltica SH 1 1792147 NP_868450.1 CDS RB8592 NC_005027.1 4580947 4581648 D best DB hits: BLAST: pir:S77440; hypothetical protein sll1084 - Synechocystis sp. (strain; E=2e-14 embl:CAB75381.1; (AL139298) hypothetical protein SCC88.11c; E=6e-09 pir:E72374; hypothetical protein - Thermotoga maritima (strain; E=4e-05 COG: sll1084; COG1032 Fe-S oxidoreductases family 2; E=2e-15 PFAM: PF02474; Nodulation protein A (NodA); E=0.78; hypothetical protein 4580947..4581648 Rhodopirellula baltica SH 1 1796570 NP_868451.1 CDS RB8594 NC_005027.1 4581645 4581770 D hypothetical protein 4581645..4581770 Rhodopirellula baltica SH 1 1796392 NP_868452.1 CDS rne NC_005027.1 4581760 4583364 D PMID: 2011493 PMID: 8415644 PMID: 11328869 best DB hits: BLAST: pir:B82538; ribonuclease E XF2607 [imported] - Xylella fastidiosa; E=1e-100 pir:H83273; ribonuclease E PA2976 [imported] - Pseudomonas; E=7e-97 gb:AAK03075.1; (AE006138) Rne [Pasteurella multocida]; E=2e-95 COG: XF2607; COG1530 Ribonucleases G and E; E=1e-101 PFAM: PF00575; S1 RNA binding domain; E=3.6e-07; ribonuclease E 4581760..4583364 Rhodopirellula baltica SH 1 1794293 NP_868453.1 CDS mdsA NC_005027.1 4583361 4584935 D PMID: 10809675 best DB hits: BLAST: gb:AAF72520.1; AF248951_1 (AF248951) mucin-desulfating sulfatase; E=2e-56 pir:T44602; phosphonate monoester hydrolase (EC 3.1.3.-) PEH; E=3e-30 pir:F83354; probable sulfatase PA2333 [imported] - Pseudomonas; E=1e-26 COG: PA2333; COG3119 Arylsulfatase A and related enzymes; E=9e-28 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=9e-08 VC2600; COG3083 Predicted hydrolase of alkaline phosphatase; E=9e-07 PFAM: PF00884; Sulfatase; E=2.6e-65; mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase) 4583361..4584935 Rhodopirellula baltica SH 1 1795226 NP_868454.1 CDS GALNS NC_005027.1 4584856 4586307 D PMID: 9634230 best DB hits: BLAST: gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=8e-20 ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=3e-18 pir:F70837; probable sulfatase (EC 3.1.6.-) atsG - Mycobacterium; E=2e-15 COG: Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=2e-16 BS_yvgJ; COG1368 Phosphoglycerol transferase and related proteins,; E=0.001 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=0.002 PFAM: PF01663; Type I phosphodiesterase / nucle; E=0.89 PF00884; Sulfatase; E=7.3e-28; sulfatase atsG 4584856..4586307 Rhodopirellula baltica SH 1 1790287 NP_868455.1 CDS fdhF NC_005027.1 4586329 4588524 D PMID: 2941757 PMID: 2211698 PMID: 9036855 best DB hits: BLAST: gb:AAC44462.1; (U60056) CbbBc [Ralstonia eutropha]; E=7e-98 pir:T35749; probable formate dehydrogenase - Streptomyces coelicolor; E=8e-96 pir:A82998; probable oxidoreductase PA5181 [imported] - Pseudomonas; E=7e-93 COG: PA5181; COG0243 Anaerobic dehydrogenases, typically; E=6e-94 MTH1552; COG3383 Uncharacterized anaerobic dehydrogenase; E=9e-45 PH1353; COG0243 Anaerobic dehydrogenases, typically; E=7e-38 PFAM: PF00384; Molybdopterin oxidoreductases; E=2e-36 PF01568; Molydopterin dinucleotide bin; E=1.7e-08; formate dehydrogenase-like protein 4586329..4588524 Rhodopirellula baltica SH 1 1792482 NP_868456.1 CDS RB8599 NC_005027.1 4588490 4588870 R hypothetical protein complement(4588490..4588870) Rhodopirellula baltica SH 1 1797165 NP_868457.1 CDS RB8601 NC_005027.1 4588912 4590165 D signal peptide 4588912..4590165 Rhodopirellula baltica SH 1 1796246 NP_868458.1 CDS ccsA NC_005027.1 4590203 4593886 D PMID: 7610180 PMID: 8617725 best DB hits: BLAST: pir:D81040; cytochrome c-type biogenesis protein, probable NMB1803; E=2e-18 pir:B81986; probable membrane protein NMA0660 [imported] - Neisseria; E=2e-18 pir:H71862; probable cytochrome C-type biogenesis protein -; E=7e-17 COG: NMB1803; COG0755 Cytochrome c-type biogenesis protein (heme exporter; E=2e-19 APE2274; COG1138 Cytochrome c biogenesis factor; E=5e-04 NMB1804; COG1333 ResB protein required for cytochrome c biosynthesis; E=0.002 PFAM: PF02590; Uncharacterized ACR, COG1576; E=0.15 PF01578; Cytochrome C assembly protein; E=0.036; cytochrome c-type biogenesis protein 4590203..4593886 Rhodopirellula baltica SH 1 1791526 NP_868459.1 CDS RB8611 NC_005027.1 4593970 4594224 D hypothetical protein 4593970..4594224 Rhodopirellula baltica SH 1 1796574 NP_868460.1 CDS ubiG NC_005027.1 4594213 4595094 R PMID: 1479344 best DB hits: BLAST: pir:C83249; 3-demethylubiquinone-9 3-methyltransferase PA3171; E=0.004 swissprot:P08442; YAT1_SYNP6 ATP SYNTHASE SUBUNITS REGION ORF 1; E=0.055 pir:S76629; hypothetical protein - Synechocystis sp. (strain PCC; E=0.19 COG: PA3171; COG2227; E=3e-04; 3-demethylubiquinone-9 3-methyltransferase complement(4594213..4595094) Rhodopirellula baltica SH 1 1791835 NP_868461.1 CDS pfaS NC_005027.1 4595082 4595960 R PMID: 10548741 best DB hits: BLAST: gb:AAB89983.1; (AE001017) phosphoribosylformylglycinamidine; E=2e-33 ddbj:BAA20816.1; (AB002359) KIAA0361 [Homo sapiens]; E=2e-26 swissprot:O15067; PUR4_HUMAN PHOSPHORIBOSYLFORMYLGLYCINAMIDINE; E=2e-26 COG: AF1260; COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase,; E=1e-34 NMB1996_2; COG0047 Phosphoribosylformylglycinamidine (FGAM); E=3e-22 HI0752_2; COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase,; E=1e-20; phosphoribosylformylglycinamidine synthase I (purQ) complement(4595082..4595960) Rhodopirellula baltica SH 1 1793224 NP_868462.1 CDS RB8615 NC_005027.1 4595974 4598340 D best DB hits: BLAST: pir:E69869; thioredoxin related protein ykvV - Bacillus subtilis; E=1e-07 pir:E69891; cytochrome c biogenesis protein CycX homolog homolog; E=4e-07 swissprot:P43221; TLPA_BRAJA THIOL:DISULFIDE INTERCHANGE PROTEIN; E=3e-06 COG: BS_ykvV; COG0526 Thiol-disulfide isomerase and thioredoxins; E=9e-09 PFAM: PF02369; Bacterial Ig-like domain (group 1); E=0.033; thioredoxin related protein ykvV 4595974..4598340 Rhodopirellula baltica SH 1 1795773 NP_868463.1 CDS RB8622 NC_005027.1 4598321 4599388 D hypothetical protein 4598321..4599388 Rhodopirellula baltica SH 1 1796312 NP_868464.1 CDS RB8625 NC_005027.1 4599385 4599855 D signal peptide 4599385..4599855 Rhodopirellula baltica SH 1 1792186 NP_868465.1 CDS RB8628 NC_005027.1 4599960 4600265 D hypothetical protein 4599960..4600265 Rhodopirellula baltica SH 1 1796053 NP_868466.1 CDS RB8629 NC_005027.1 4600323 4600619 D best DB hits: BLAST: pir:B70403; hypothetical protein aq_1194 - Aquifex aeolicus -----; E=0.009 swissprot:P72821; YC90_SYNY3 HYPOTHETICAL 21.6 KD PROTEIN SLR1290; E=0.013 pir:T34610; hypothetical protein SC10A7.07 - Streptomyces coelicolor; E=0.069; hypothetical protein 4600323..4600619 Rhodopirellula baltica SH 1 1796740 NP_868467.1 CDS RB8630 NC_005027.1 4600763 4601035 D hypothetical protein 4600763..4601035 Rhodopirellula baltica SH 1 1796723 NP_868468.1 CDS argD NC_005027.1 4601126 4602520 D PMID: 2199330 best DB hits: BLAST: swissprot:Q58131; ARGD_METJA ACETYLORNITHINE AMINOTRANSFERASE; E=2e-23 swissprot:P30268; YKAB_BACFI PROBABLE AMINOTRANSFERASE IN KATA; E=3e-19 embl:CAC11216.1; (AL445063) L-2,; E=5e-19 COG: MJ0721; COG0160 PLP-dependent aminotransferases; E=2e-24 PFAM: PF00202; Aminotransferase class-III; E=1.7e-39; acetylornithine aminotransferase 4601126..4602520 Rhodopirellula baltica SH 1 1794792 NP_868469.1 CDS RB8634 NC_005027.1 4602560 4602715 D hypothetical protein 4602560..4602715 Rhodopirellula baltica SH 1 1791411 NP_868470.1 CDS ykuE NC_005027.1 4602649 4603914 R best DB hits: BLAST: pir:B69865; probable phosphoesterase (EC 3.1.-.-) ykuE - Bacillus; E=1e-16 gb:AAB08594.1; (U70214) hypothetical [Escherichia coli]; E=1e-15 pir:D64740; probable phosphoesterase (EC 3.1.-.-) yaeI - Escherichia; E=1e-15 COG: BS_ykuE; COG1408 Predicted phosphohydrolases; E=1e-17 PFAM: PF02549; DNA repair exonuclease; E=0.12; phosphoesterase ykuE complement(4602649..4603914) Rhodopirellula baltica SH 1 1796449 NP_868471.1 CDS sixA NC_005027.1 4603872 4604477 R best DB hits: BLAST: pir:T36773; hypothetical protein SCI28.03c - Streptomyces coelicolor; E=2e-12 pir:T49094; hypothetical protein F4F15.260 - Arabidopsis thaliana; E=5e-12 swissprot:Q11043; YC76_MYCTU HYPOTHETICAL 16.5 KDA PROTEIN RV1276C; E=3e-08 COG: Rv1276c; COG2062 Phosphohistidine phosphatase SixA; E=3e-09 slr1124; COG0406 Phosphoglycerate mutase/fructose-2,6-bisphosphatase; E=0.001 Cj1002c; COG2062 Phosphohistidine phosphatase SixA; E=0.002 PFAM: PF00300; Phosphoglycerate mutase; E=0.013; phosphohistidine phosphatase complement(4603872..4604477) Rhodopirellula baltica SH 1 1796440 NP_868472.1 CDS RB8639 NC_005027.1 4604495 4605874 D best DB hits: BLAST: gb:AAG20856.1; (AE005154) Vng6189h [Halobacterium sp. NRC-1]; E=5e-05 pir:H69064; serinethreonine protein kinase related protein -; E=0.005 pir:C82804; conserved hypothetical protein XF0464 [imported] -; E=0.053 COG: MTH1485; COG1520 Uncharacterized proteins of WD40-like repeat family; E=5e-04 PFAM: PF01011; PQQ enzyme repeat; E=0.27; hypothetical protein 4604495..4605874 Rhodopirellula baltica SH 1 1794423 NP_868473.1 CDS RB8641 NC_005027.1 4605970 4606248 D hypothetical protein 4605970..4606248 Rhodopirellula baltica SH 1 1790299 NP_868474.1 CDS RB8644 NC_005027.1 4606349 4606828 D best DB hits: BLAST: gb:AAF29108.1; AF161493_1 (AF161493) HSPC144 [Homo sapiens]; E=7e-35 gb:AAG43118.1; AF059619_1 (AF059619) My005 protein [Homo sapiens]; E=7e-35 pir:C82610; conserved hypothetical protein XF2014 [imported] -; E=3e-31 COG: XF2014; COG2947 Uncharacterized BCR; E=3e-32; hypothetical protein 4606349..4606828 Rhodopirellula baltica SH 1 1790652 NP_868475.1 CDS RB8646 NC_005027.1 4606868 4607347 R hypothetical protein complement(4606868..4607347) Rhodopirellula baltica SH 1 1792778 NP_868476.1 CDS RB8648 NC_005027.1 4607282 4607563 D hypothetical protein 4607282..4607563 Rhodopirellula baltica SH 1 1797188 NP_868477.1 CDS cypH NC_005027.1 4607622 4608245 D PMID: 8694762 best DB hits: BLAST: pir:T02489; peptidylprolyl isomerase (EC 5.2.1.8) F23F1.12 -; E=2e-55 pir:T50837; cyclophilin CYP5 [imported] - Arabidopsis thaliana; E=3e-55 pir:T50838; cyclophilin ROC7 [imported] - Arabidopsis thaliana; E=1e-53 COG: slr1251; COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) -; E=6e-54 PFAM: PF00160; Cyclophilin type peptidyl-proly; E=1.4e-105; peptidylprolyl isomerase 4607622..4608245 Rhodopirellula baltica SH 1 1790188 NP_868478.1 CDS RB8651 NC_005027.1 4608494 4609975 D best DB hits: BLAST: pir:S75346; hypothetical protein slr2013 - Synechocystis sp. (strain; E=2e-34 pir:D83106; hypothetical protein PA4323 [imported] - Pseudomonas; E=3e-33 ddbj:BAB04451.1; (AP001509) BH0732~unknown conserved protein in; E=9e-31 COG: slr2013; COG1721 Uncharacterized ACR; E=2e-35 PFAM: PF01882; Protein of unknown function DUF; E=5.3e-19; hypothetical protein 4608494..4609975 Rhodopirellula baltica SH 1 1795556 NP_868479.1 CDS RB8652 NC_005027.1 4609979 4610365 D hypothetical protein 4609979..4610365 Rhodopirellula baltica SH 1 1795982 NP_868480.1 CDS RB8669 NC_005027.1 4614557 4614670 D hypothetical protein 4614557..4614670 Rhodopirellula baltica SH 1 1795242 NP_868481.1 CDS RB8670 NC_005027.1 4614842 4614985 D hypothetical protein 4614842..4614985 Rhodopirellula baltica SH 1 1792947 NP_868482.1 CDS RB8672 NC_005027.1 4615354 4615710 R hypothetical protein complement(4615354..4615710) Rhodopirellula baltica SH 1 1793385 NP_868483.1 CDS RB8674 NC_005027.1 4615595 4617571 D best DB hits: BLAST: pir:H71366; probable thioredoxin - syphilis spirochete ----- gb:; E=2e-11 gb:AAD00775.1; (U95250) thioredoxin [Treponema pallidum]; E=2e-11 ddbj:BAB06587.1; (AP001516) thioldisulfide interchange protein; E=7e-09 COG: TP0100; COG0526 Thiol-disulfide isomerase and thioredoxins; E=2e-12 XF2174; COG3118 Thioredoxin domain-containing protein; E=7e-07 XF1990; COG0526 Thiol-disulfide isomerase and thioredoxins; E=1e-06 PFAM: PF00085; Thioredoxin; E=0.34; thioredoxin 4615595..4617571 Rhodopirellula baltica SH 1 1796619 NP_868484.1 CDS RB8677 NC_005027.1 4617669 4618556 R best DB hits: BLAST: pir:S76850; hypothetical protein - Synechocystis sp. (strain PCC; E=0.56; hypothetical protein complement(4617669..4618556) Rhodopirellula baltica SH 1 1792253 NP_868485.1 CDS RB8679 NC_005027.1 4618580 4620013 R best DB hits: BLAST: gb:AAF23289.1; AC016661_14 (AC016661) oxidoreductase; E=1e-52 gb:AAG19065.1; (AE005005) Vng0542c [Halobacterium sp. NRC-1]; E=2e-45 pir:C75327; oxidoreductase, FAD-binding - Deinococcus radiodurans; E=2e-41 COG: VNG0542C; COG1233 Phytoene dehydrogenase and related proteins; E=2e-46 PFAM: PF00070; Pyridine nucleotide-disulphide; E=0.041 PF01593; Flavin containing amine oxidase; E=2.5e-05 PF01494; FAD binding domain; E=0.0013; oxidoreductase complement(4618580..4620013) Rhodopirellula baltica SH 1 1793311 NP_868486.1 CDS RB8680 NC_005027.1 4620010 4621476 R best DB hits: BLAST: ddbj:BAA33615.1; (AB012956) unknown [Vibrio cholerae]; E=6e-99 pir:F82345; conserved hypothetical protein VC0264 [imported] -; E=9e-96 gb:AAD54657.1; AF090685_1 (AF090685) hypothetical protein [Vibrio; E=7e-67 COG: VC0264; COG1236 Predicted exonuclease of the beta-lactamase fold; E=9e-97 MJ1236; COG1782 Predicted metal-dependent RNase, consists of a; E=4e-39 MJ0162; COG1236 Predicted exonuclease of the beta-lactamase fold; E=1e-26 PFAM: PF00753; Metallo-beta-lactamase superfami; E=9.3e-07; cleavage and polyadenylation specifity factor-related protein complement(4620010..4621476) Rhodopirellula baltica SH 1 1790252 NP_868487.1 CDS RB8681 NC_005027.1 4621513 4621959 D hypothetical protein 4621513..4621959 Rhodopirellula baltica SH 1 1791881 NP_868488.1 CDS RB8683 NC_005027.1 4621902 4622102 D hypothetical protein 4621902..4622102 Rhodopirellula baltica SH 1 1792054 NP_868489.1 CDS RB8684 NC_005027.1 4622113 4623192 D best DB hits: BLAST: gb:AAG20046.1; (AE005084) Vng1839h [Halobacterium sp. NRC-1]; E=3e-46 embl:CAC11174.1; (AL445063) hypothetical protein [Thermoplasma; E=3e-40 pir:E72334; conserved hypothetical protein - Thermotoga maritima; E=6e-29 COG: VNG1839H; COG3367 Uncharacterized ACR; E=3e-47; hypothetical protein 4622113..4623192 Rhodopirellula baltica SH 1 1796362 NP_868490.1 CDS ykfB NC_005027.1 4623156 4624238 D PMID: 2583528 best DB hits: BLAST: gb:AAG20045.1; (AE005084) chloromuconate cycloisomerase; YkfB1; E=3e-38 pir:H64881; hypothetical protein b1325 - Escherichia coli -----; E=1e-24 swissprot:P51981; YCJG_ECOLI HYPOTHETICAL 34.7 KD PROTEIN IN; E=8e-24 COG: VNG1837G; COG1441 O-succinylbenzoate synthase and related enzymes; E=3e-39 PFAM: PF02746; Mandelate racemase / muconate lacton; E=0.00038 PF01188; Mandelate racemase / muconate lacton; E=9.6e-23; chloromuconate cycloisomerase YkfB1 4623156..4624238 Rhodopirellula baltica SH 1 1796966 NP_868491.1 CDS RB8687 NC_005027.1 4624297 4626705 D best DB hits: BLAST: pir:A83422; hypothetical protein PA1797 [imported] - Pseudomonas; E=4e-34 pir:G75201; probable beta-lactamase (EC 3.5.2.6) PAB0087 -; E=3e-29 gb:AAF86053.1; AF210139_1 (AF210139) fmtA-like protein; E=4e-28 COG: PA1797; COG1680 Beta-lactamase class C and other penicillin binding; E=3e-35 ddpX; COG2173 D-alanyl-D-alanine dipeptidase; E=6e-16 Rv0399c; COG1680 Beta-lactamase class C and other penicillin binding; E=6e-14 PFAM: PF01427; D-ala-D-ala dipeptidase; E=3.1e-32; beta-lactamase 4624297..4626705 Rhodopirellula baltica SH 1 1794235 NP_868492.1 CDS RB8689 NC_005027.1 4626753 4626875 R hypothetical protein complement(4626753..4626875) Rhodopirellula baltica SH 1 1797177 NP_868493.1 CDS RB8690 NC_005027.1 4626859 4628703 R best DB hits: PFAM: PF02774; Semialdehyde dehydrogenase, d; E=0.16; hypothetical protein complement(4626859..4628703) Rhodopirellula baltica SH 1 1792804 NP_868494.1 CDS RB8693 NC_005027.1 4628700 4629695 R best DB hits: BLAST: gb:AAF81232.1; (AF263012) ABC transporter ATP binding protein; E=4e-31 pir:C72303; ABC transporter ATP-binding protein - Thermotoga; E=5e-29 pir:T36523; probable ABC-type transport system ATP-binding protein -; E=1e-28 COG: TM1028; COG1131 ABC-type multidrug transport system, ATPase; E=5e-30 PFAM: PF00005; ABC transporter; E=4.5e-39; ABC transporter ATP binding protein complement(4628700..4629695) Rhodopirellula baltica SH 1 1793504 NP_868495.1 CDS RB8695 NC_005027.1 4629692 4630087 R PMID: 7612925 best DB hits: BLAST: pir:G69999; transcriptional regulator GntR related protein ytrA -; E=7e-17 swissprot:P54590; YHCF_BACSU HYPOTHETICAL TRANSCRIPTIONAL; E=1e-11 pir:D72336; transcriptional regulator, GntR family - Thermotoga; E=5e-11 COG: BS_ytrA; COG1725 Predicted transcriptional regulators; E=7e-18 PA0268; COG1167 Transcriptional regulators containing a; E=1e-08 BH1940; COG1167 Transcriptional regulators containing a DNA-binding; E=1e-08 PFAM: PF01047; MarR family; E=0.01 PF00392; Bacterial regulatory proteins, gntR; E=5.7e-17; GntR family transcriptional regulator complement(4629692..4630087) Rhodopirellula baltica SH 1 1795784 NP_868496.1 CDS RB8697 NC_005027.1 4630111 4630281 R hypothetical protein complement(4630111..4630281) Rhodopirellula baltica SH 1 1792093 NP_868497.1 CDS RB8700 NC_005027.1 4630224 4630400 D hypothetical protein 4630224..4630400 Rhodopirellula baltica SH 1 1792752 NP_868498.1 CDS sigH NC_005027.1 4630397 4630999 D PMID: 99328972 best DB hits: BLAST: gb:AAD41810.1; AF144091_4 (AF144091) sigma factor SigH; E=7e-06 pir:H75550; RNA polymerase sigma-E factor - Deinococcus radiodurans; E=3e-05 swissprot:O05843; RPOE_MYCTU RNA POLYMERASE SIGMA-E FACTOR; E=8e-05 COG: DR0180; COG1595 DNA-directed RNA polymerase specialized sigma; E=3e-06 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=0.0092; sigma factor SigH 4630397..4630999 Rhodopirellula baltica SH 1 1791887 NP_868499.1 CDS RB8703 NC_005027.1 4630992 4631468 D hypothetical protein 4630992..4631468 Rhodopirellula baltica SH 1 1793124 NP_868500.1 CDS RB8704 NC_005027.1 4631375 4632673 D hypothetical protein 4631375..4632673 Rhodopirellula baltica SH 1 1793802 NP_868501.1 CDS pilC NC_005027.1 4632670 4633758 D PMID: 95369727 PMID: 1971619 best DB hits: BLAST: pir:A82078; type IV pilin biogenesis protein PilC VC2425 [imported]; E=8e-09 gb:AAB65806.1; (U17138) FimO [Dichelobacter nodosus]; E=3e-06 swissprot:P22609; PILC_PSEAE FIMBRIAL ASSEMBLY PROTEIN PILC; E=2e-05 COG: VC2425; COG1459 General secretory pathway protein F; E=7e-10 PFAM: PF00482; Bacterial type II secretion syst; E=8.1e-08; type IV pilin biogenesis protein PilC 4632670..4633758 Rhodopirellula baltica SH 1 1796557 NP_868502.1 CDS tapC NC_005027.1 4633755 4634828 D PMID: 8820654 best DB hits: BLAST: gb:AAC23568.1; (AF059249) type IV pilus assembly protein TapC; E=2e-04 swissprot:P45793; TAPC_AERHY TYPE IV PILUS ASSEMBLY PROTEIN TAPC; E=5e-04 pir:S77585; pilus assembly protein pilG - Neisseria gonorrhoeae; E=0.036 PFAM: PF00482; Bacterial type II secretion system; E=0.0045; type IV pilus assembly protein TapC 4633755..4634828 Rhodopirellula baltica SH 1 1796869 NP_868503.1 CDS RB8713 NC_005027.1 4634825 4635253 D hypothetical protein 4634825..4635253 Rhodopirellula baltica SH 1 1793696 NP_868504.1 CDS RB8715 NC_005027.1 4635250 4635789 D hypothetical protein 4635250..4635789 Rhodopirellula baltica SH 1 1791150 NP_868505.1 CDS RB8717 NC_005027.1 4635786 4636415 D hypothetical protein 4635786..4636415 Rhodopirellula baltica SH 1 1795026 NP_868506.1 CDS RB8718 NC_005027.1 4636447 4637355 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 4636447..4637355 Rhodopirellula baltica SH 1 1791921 NP_868507.1 CDS RB8722 NC_005027.1 4637352 4638119 D hypothetical protein 4637352..4638119 Rhodopirellula baltica SH 1 1796010 NP_868508.1 CDS RB8723 NC_005027.1 4638077 4638301 D hypothetical protein 4638077..4638301 Rhodopirellula baltica SH 1 1795609 NP_868509.1 CDS rpmG NC_005027.1 4638301 4638465 D PMID: 9403685 best DB hits: BLAST: swissprot:O51357; RL33_BORBU 50S RIBOSOMAL PROTEIN L33 -----; E=0.32 PFAM: PF00471; Ribosomal protein L33; E=0.00011; 50S ribosomal protein L33 4638301..4638465 Rhodopirellula baltica SH 1 1791473 NP_868510.1 CDS recJ NC_005027.1 4638505 4640304 D PMID: 1987126 PMID: 2649886 best DB hits: BLAST: ddbj:BAB04959.1; (AP001511) single-strand DNA-specific; E=5e-91 pir:H69980; single-strand DNA-specific exonuclease homolog yrvE -; E=3e-88 pir:D72062; single-stranded-DNA-specific exonuclease RecJ CP0187; E=3e-73 COG: BH1240_1; COG0608 Single-stranded DNA-specific exonuclease; E=5e-92 PFAM: PF01368; DHH family; E=3e-41 PF02272; DHHA1 domain; E=0.00061; single-strand DNA-specific exonuclease 4638505..4640304 Rhodopirellula baltica SH 1 1795070 NP_868511.1 CDS RB8728 NC_005027.1 4640698 4641507 D Converts D-mannonate to D-mannuronate; D-mannonate oxidoreductase 4640698..4641507 Rhodopirellula baltica SH 1 1796343 NP_868512.1 CDS kdgK NC_005027.1 4641652 4642728 D PMID: 8157608 best DB hits: BLAST: pir:G72422; 2-keto-3-deoxygluconate kinase - Thermotoga maritima; E=1e-15 embl:CAB61818.1; (AL133236) sugar kinase [Streptomyces; E=2e-08 pir:D83362; probable 2-ketogluconate kinase PA2261 [imported] -; E=2e-06 COG: TM0067; COG0524 Sugar kinases, ribokinase; E=1e-16 PFAM: PF00294; pfkB family carbohydrate kinase; E=3.8e-10; 2-keto-3-deoxygluconate kinase 4641652..4642728 Rhodopirellula baltica SH 1 1790601 NP_868513.1 CDS RB8734 NC_005027.1 4642725 4643033 R hypothetical protein complement(4642725..4643033) Rhodopirellula baltica SH 1 1790877 NP_868514.1 CDS RB8736 NC_005027.1 4643049 4643357 R hypothetical protein complement(4643049..4643357) Rhodopirellula baltica SH 1 1796541 NP_868515.1 CDS RB8738 NC_005027.1 4643329 4643880 R hypothetical protein complement(4643329..4643880) Rhodopirellula baltica SH 1 1796338 NP_868516.1 CDS RB8739 NC_005027.1 4643832 4644191 D hypothetical protein 4643832..4644191 Rhodopirellula baltica SH 1 1796429 NP_868517.1 CDS RB8740 NC_005027.1 4644150 4644689 R hypothetical protein complement(4644150..4644689) Rhodopirellula baltica SH 1 1791437 NP_868518.1 CDS aroH NC_005027.1 4644447 4644920 D PMID: 2105742 PMID: 8046752 best DB hits: BLAST: ddbj:BAB05377.1; (AP001512) chorismate mutase [Bacillus; E=6e-26 gb:AAD33790.1; AF139534_1 (AF139534) chorismate mutase [Bacillus; E=5e-25 swissprot:P19080; CHMU_BACSU CHORISMATE MUTASE (CM) ----- pir:; E=1e-22; chorismate mutase 4644447..4644920 Rhodopirellula baltica SH 1 1793950 NP_868519.1 CDS RB8742 NC_005027.1 4644874 4645908 D hypothetical protein 4644874..4645908 Rhodopirellula baltica SH 1 1792202 NP_868520.1 CDS RB8745 NC_005027.1 4645847 4647718 D PMID: 2722750 best DB hits: BLAST: swissprot:P12626; ANFA_AZOVI NITROGEN FIXATION PROTEIN ANFA; E=1e-64 pir:A48291; ornithine decarboxylase inhibitor - Escherichia coli; E=7e-61 swissprot:Q06065; ATOC_ECOLI ACETOACETATE METABOLISM REGULATORY; E=7e-61 COG: atoC; COG2204 AAA superfamily ATPases with N-terminal receiver; E=7e-62 ygeV_3; COG1221 NtrC family transcriptional regulators, ATPase; E=3e-61 TP0519; COG2204 AAA superfamily ATPases with N-terminal receiver; E=8e-60 PFAM: PF00498; FHA domain; E=1.4e-16 PF00158; Sigma-54 interaction domain; E=1.6e-129 PF02001; Protein of unknown function DUF134; E=0.73; nitrogen fixation protein anfA (sigma-54 dependendent transcriptional regulator 4645847..4647718 Rhodopirellula baltica SH 1 1796387 NP_868521.1 CDS RB8746 NC_005027.1 4647715 4648155 D hypothetical protein 4647715..4648155 Rhodopirellula baltica SH 1 1793967 NP_868522.1 CDS dfp NC_005027.1 4648152 4648808 D best DB hits: BLAST: ddbj:BAB06229.1; (AP001515) flavoprotein [Bacillus halodurans]; E=2e-26 swissprot:P44953; DFP_HAEIN DNAPANTOTHENATE METABOLISM; E=2e-26 pir:B82982; DNApantothenate metabolism flavoprotein PA5320; E=5e-25 COG: BH2510; COG0452 Flavoprotein involved in pantothenate metabolism; E=2e-27; flavoprotein 4648152..4648808 Rhodopirellula baltica SH 1 1796157 NP_868523.1 CDS pyrD NC_005027.1 4648815 4649732 D PMID: 1709162 PMID: 10545205 best DB hits: BLAST: ddbj:BAB06253.1; (AP001515) dihydroorotate dehydrogenase; E=6e-68 swissprot:P25996; PYRD_BACSU DIHYDROOROTATE DEHYDROGENASE,; E=3e-67 swissprot:P46539; PYRD_BACCL DIHYDROOROTATE DEHYDROGENASE,; E=2e-65 COG: BH2534; COG0167 Dihydroorotate dehydrogenase; E=6e-69 PFAM: PF00977; Histidine biosynthesis protein; E=0.004 PF01180; Dihydroorotate dehydrogenase; E=4.3e-82; dihydroorotate dehydrogenase 4648815..4649732 Rhodopirellula baltica SH 1 1796542 NP_868524.1 CDS RB8749 NC_005027.1 4649739 4649927 R hypothetical protein complement(4649739..4649927) Rhodopirellula baltica SH 1 1793280 NP_868525.1 CDS RB8750 NC_005027.1 4649932 4651029 R signal peptide complement(4649932..4651029) Rhodopirellula baltica SH 1 1796077 NP_868526.1 CDS RB8752 NC_005027.1 4651227 4652345 R hypothetical protein complement(4651227..4652345) Rhodopirellula baltica SH 1 1795391 NP_868527.1 CDS batD NC_005027.1 4652356 4655331 R PMID: 99232513 best DB hits: BLAST: gb:AAD30861.1; AF116251_4 (AF116251) BatD [Bacteroides fragilis]; E=2e-10 gb:AAD30862.1; AF116251_5 (AF116251) BatE [Bacteroides fragilis]; E=4e-04 embl:CAA76834.1; (Y17720) SPINDLY protein [Petunia x hybrida]; E=0.59 PFAM: PF00515; TPR Domain; E=4e-07; hypothetical protein complement(4652356..4655331) Rhodopirellula baltica SH 1 1791661 NP_868528.1 CDS batB NC_005027.1 4655325 4657568 R PMID: 99232513 best DB hits: BLAST: gb:AAD30859.1; AF116251_2 (AF116251) BatB [Bacteroides fragilis]; E=5e-25 gb:AAD30858.1; AF116251_1 (AF116251) BatA [Bacteroides fragilis]; E=8e-15 pir:E70121; hypothetical protein BB0173 - Lyme disease spirochete; E=1e-09 COG: BB0173; COG3035 Uncharacterized BCR; E=1e-10 yfbK; COG2304 Protein containing von Willebrand factor (vWF) type A; E=0.003 APE0605; COG3035 Uncharacterized BCR; E=0.006 PFAM: PF00092; von Willebrand factor type A domain; E=6e-05; BatB complement(4655325..4657568) Rhodopirellula baltica SH 1 1793262 NP_868529.1 CDS batA NC_005027.1 4657463 4658536 R PMID: 99232513 best DB hits: BLAST: gb:AAD30858.1; AF116251_1 (AF116251) BatA [Bacteroides fragilis]; E=3e-38 pir:E82493; conserved hypothetical protein VCA0172 [imported] -; E=8e-29 pir:B83262; hypothetical protein PA3073 [imported] - Pseudomonas; E=4e-23 COG: VCA0172; COG3035 Uncharacterized BCR; E=8e-30 PFAM: PF00092; von Willebrand factor type A do; E=0.00041; BatA complement(4657463..4658536) Rhodopirellula baltica SH 1 1794890 NP_868530.1 CDS RB8764 NC_005027.1 4658533 4659579 R hypothetical protein complement(4658533..4659579) Rhodopirellula baltica SH 1 1796456 NP_868531.1 CDS RB8767 NC_005027.1 4659576 4660451 R best DB hits: BLAST: pir:G70121; conserved hypothetical protein BB0175 - Lyme disease; E=7e-30 swissprot:P71761; YE80_MYCTU HYPOTHETICAL 34.3 KDA PROTEIN RV1480; E=7e-27 pir:H83261; hypothetical protein PA3071 [imported] - Pseudomonas; E=3e-26 COG: BB0175; COG1721 Uncharacterized ACR; E=7e-31 PFAM: PF01882; Protein of unknown function DUF58; E=4.2e-38; hypothetical protein complement(4659576..4660451) Rhodopirellula baltica SH 1 1795902 NP_868532.1 CDS RB8768 NC_005027.1 4660455 4661498 R best DB hits: BLAST: pir:G83261; conserved hypothetical protein PA3070 [imported] -; E=9e-66 pir:H82493; MoxR-related protein VCA0175 [imported] - Vibrio; E=2e-65 pir:B70874; probable moxR protein - Mycobacterium tuberculosis; E=4e-63 COG: PA3070; COG0714 MoxR-like ATPases; E=9e-67 PFAM: PF01078; Magnesium chelatase, subunit Chl; E=1e-06; moxR-type regulator complement(4660455..4661498) Rhodopirellula baltica SH 1 1792612 NP_868533.1 CDS RB8770 NC_005027.1 4661775 4663367 R best DB hits: BLAST: gb:AAG20870.1; (AE005155) Vng6208c [Halobacterium sp. NRC-1]; E=7e-05 pir:E75514; B-cell receptor associated protein-related protein -; E=0.016 COG: DR0482; COG0330 Membrane protease subunits, stomatin/prohibitin; E=0.002; hypothetical protein complement(4661775..4663367) Rhodopirellula baltica SH 1 1794522 NP_868534.1 CDS RB8773 NC_005027.1 4663364 4665094 R best DB hits: BLAST: gb:AAG20870.1; (AE005155) Vng6208c [Halobacterium sp. NRC-1]; E=3e-04 pir:E75514; B-cell receptor associated protein-related protein -; E=8e-04 pir:S75156; hypothetical protein slr1768 - Synechocystis sp. (strain; E=8e-04 COG: DR0482; COG0330 Membrane protease subunits, stomatin/prohibitin; E=8e-05; hypothetical protein complement(4663364..4665094) Rhodopirellula baltica SH 1 1793081 NP_868535.1 CDS RB8774 NC_005027.1 4665122 4665250 R hypothetical protein complement(4665122..4665250) Rhodopirellula baltica SH 1 1794901 NP_868536.1 CDS RB8775 NC_005027.1 4665252 4665497 R hypothetical protein complement(4665252..4665497) Rhodopirellula baltica SH 1 1795546 NP_868537.1 CDS RB8776 NC_005027.1 4665512 4665772 D hypothetical protein 4665512..4665772 Rhodopirellula baltica SH 1 1796263 NP_868538.1 CDS rho NC_005027.1 4665826 4667160 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 4665826..4667160 Rhodopirellula baltica SH 1 1797201 NP_868539.1 CDS sdaA NC_005027.1 4667344 4668846 D PMID: 2504697 best DB hits: BLAST: pir:B83341; L-serine dehydratase PA2443 [imported] - Pseudomonas; E=1e-141 pir:D82974; L-serine dehydratase PA5379 [imported] - Pseudomonas; E=1e-127 swissprot:O86564; SDHL_STRCO L-SERINE DEHYDRATASE (L-SERINE; E=1e-126 COG: PA2443; COG1760 L-serine deaminase; E=1e-142; L-serine dehydratase 4667344..4668846 Rhodopirellula baltica SH 1 1796451 NP_868540.1 CDS RB8780 NC_005027.1 4668909 4669028 R hypothetical protein complement(4668909..4669028) Rhodopirellula baltica SH 1 1794987 NP_868541.1 CDS RB8781 NC_005027.1 4669001 4670116 D best DB hits: BLAST: embl:CAC14937.1; (AL449216) oxidoreductase [Streptomyces; E=8e-20 swissprot:P49305; YMO1_RHIME HYPOTHETICAL 36.4 KD PROTEIN IN; E=1e-12 ddbj:BAB04429.1; (AP001509) BH0710~unknown conserved protein; E=3e-11 COG: BH0710; COG0673 Predicted dehydrogenases and related proteins; E=3e-12 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=2.3e-26; NADH-dependent oxidoreductase 4669001..4670116 Rhodopirellula baltica SH 1 1795962 NP_868542.1 CDS RB8783 NC_005027.1 4670203 4671168 R best DB hits: BLAST: pir:T48821; hypothetical protein 68B2.50 [imported] - Neurospora; E=7e-21 pir:T37061; probable secreted protein - Streptomyces coelicolor; E=1e-05 pir:S71925; angel protein - fruit fly (Drosophila melanogaster); E=0.001; hypothetical protein complement(4670203..4671168) Rhodopirellula baltica SH 1 1790020 NP_868543.1 CDS fucI NC_005027.1 4671165 4672793 R best DB hits: BLAST: pir:H72393; hypothetical protein TM0307 - Thermotoga maritima; E=3e-12 COG: TM0307; COG2407 L-fucose isomerase and related proteins; E=3e-13; L-fucose isomerase complement(4671165..4672793) Rhodopirellula baltica SH 1 1792331 NP_868544.1 CDS araB NC_005027.1 4672814 4674508 R catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; ribulokinase complement(4672814..4674508) Rhodopirellula baltica SH 1 1797149 NP_868545.1 CDS RB8789 NC_005027.1 4674623 4677007 R best DB hits: BLAST: pir:T35497; hypothetical protein SC6E10.10 - Streptomyces coelicolor; E=0.14 gb:AAG54838.1; AE005229_1 (AE005229) RTX family exoprotein; E=0.87; hypothetical protein complement(4674623..4677007) Rhodopirellula baltica SH 1 1795704 NP_868546.1 CDS yidR NC_005027.1 4677023 4678378 R best DB hits: BLAST: swissprot:P31455; YIDR_ECOLI HYPOTHETICAL 46.4 KD PROTEIN IN; E=5e-86 gb:AAA62041.1; (L10328) f416 [Escherichia coli]; E=3e-85 gb:AAG58891.1; AE005600_9 (AE005600) orf, hypothetical protein; E=3e-85 COG: RP302; COG0823 Periplasmic component of the Tol biopolymer transport; E=0.004 PFAM: PF02039; Adrenomedullin; E=0.72; hypothetical protein complement(4677023..4678378) Rhodopirellula baltica SH 1 1792620 NP_868547.1 CDS RB8796 NC_005027.1 4678582 4679277 D best DB hits: BLAST: pir:T36491; probable gntR-family transcriptional regulator -; E=1e-12 pir:T34672; probable gntR family transcriptional regulator -; E=2e-10 pir:B83545; probable transcriptional regulator PA0797 [imported] -; E=3e-10 COG: PA0797; COG1802 Transcriptional regulators; E=3e-11 DR1905; COG2186 Transcriptional regulators; E=2e-07 VC1335; COG1802 Transcriptional regulators; E=2e-07 PFAM: PF00392; Bacterial regulatory proteins, gntR; E=3.7e-09; GntR family transcriptional regulator 4678582..4679277 Rhodopirellula baltica SH 1 1791319 NP_868548.1 CDS RB8797 NC_005027.1 4679244 4680872 R PMID: 9329364 best DB hits: BLAST: pir:S75887; hypothetical protein - Synechocystis sp. (strain PCC; E=3e-31 embl:CAC16517.1; (AL450223) integral membrane transport; E=1e-27 gb:AAF57192.1; (AE003779) CG2187 gene product [Drosophila; E=6e-27 COG: sll1087; COG0591 Na+/proline, Na+/panthothenate symporters and; E=3e-32 yidK; COG0591 Na+/proline, Na+/panthothenate symporters and related; E=3e-06 PAB0609; COG0591 Na+/proline, Na+/panthothenate symporters and; E=1e-04 PFAM: PF00474; Sodium:solute symporter family; E=1.5e-11; sodium iodide symporter complement(4679244..4680872) Rhodopirellula baltica SH 1 1794611 NP_868549.1 CDS dapA NC_005027.1 4680869 4681828 R PMID: 8098035 best DB hits: BLAST: gb:AAG18989.1; (AE004999) dihydrodipicolinate synthase; DapA; E=2e-23 swissprot:P75682; YAGE_ECOLI HYPOTHETICAL 33.3 KD PROTEIN IN; E=6e-19 pir:S56523; dihydrodipicolinate synthase homolog yjhH - Escherichia; E=1e-18 COG: VNG0444G; COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate; E=2e-24 PFAM: PF00701; Dihydrodipicolinate synthetase famil; E=1.6e-46; dihydrodipicolinate synthase DapA complement(4680869..4681828) Rhodopirellula baltica SH 1 1796434 NP_868550.1 CDS RB8799 NC_005027.1 4681977 4683413 R best DB hits: BLAST: ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=6e-11 ddbj:BAB05884.1; (AP001514) BH2165~unknown conserved protein; E=7e-11 pir:T34927; probable oxidoreductase - Streptomyces coelicolor; E=8e-11 COG: BH1248; COG0673 Predicted dehydrogenases and related proteins; E=6e-12 PFAM: PF01408; Oxidoreductase, NAD-bin; E=9.9e-20; NADH-dependent dyhydrogenase complement(4681977..4683413) Rhodopirellula baltica SH 1 1796074 NP_868551.1 CDS RB8803 NC_005027.1 4683497 4684438 R hypothetical protein complement(4683497..4684438) Rhodopirellula baltica SH 1 1791377 NP_868552.1 CDS RB8806 NC_005027.1 4684515 4685042 D best DB hits: BLAST: embl:CAC12079.1; (AL445066) conserved hypothetical protein; E=2e-11 swissprot:Q58668; YC72_METJA HYPOTHETICAL PROTEIN MJ1272 -----; E=1e-10 swissprot:O27296; YC28_METTH HYPOTHETICAL PROTEIN MTH1228 -----; E=2e-10 COG: Ta0950; COG0720 6-pyruvoyl-tetrahydropterin synthase; E=1e-12 PFAM: PF01242; 6-pyruvoyl tetrahydropterin synthas; E=0.0016 PF01945; Domain of unknown function; E=0.87; 6-pyruvoyl tetrahydrobiopterin synthase 4684515..4685042 Rhodopirellula baltica SH 1 1795973 NP_868553.1 CDS RB8807 NC_005027.1 4685078 4686313 R best DB hits: BLAST: ddbj:BAB05084.1; (AP001511) BH1365~unknown conserved protein in; E=1e-17 pir:G81831; probable integral membrane protein NMA2020 [imported] -; E=1e-16 pir:F81195; conserved hypothetical protein NMB0465 [imported] -; E=1e-16 COG: BH1365; COG2928 Uncharacterized BCR; E=1e-18; hypothetical protein complement(4685078..4686313) Rhodopirellula baltica SH 1 1791041 NP_868554.1 CDS RB8812 NC_005027.1 4686310 4687218 R best DB hits: BLAST: pir:D83584; probable phosphoribosyl transferase PA0489 [imported] -; E=1e-05 gb:AAD29646.1; AF124757_6 (AF124757) competence protein F; E=2e-05 pir:H82042; ComF-related protein VC2719 [imported] - Vibrio cholerae; E=0.50 COG: PA0489; COG1040 Predicted amidophosphoribosyltransferases; E=1e-06 PFAM: PF00156; Phosphoribosyl transferase domai; E=0.00076; phosphoribosyl transferase complement(4686310..4687218) Rhodopirellula baltica SH 1 1795181 NP_868555.1 CDS RB8813 NC_005027.1 4687305 4687445 D hypothetical protein 4687305..4687445 Rhodopirellula baltica SH 1 1792088 NP_868556.1 CDS RB8814 NC_005027.1 4687433 4687669 D hypothetical protein 4687433..4687669 Rhodopirellula baltica SH 1 1793713 NP_868557.1 CDS RB8815 NC_005027.1 4687740 4687955 R hypothetical protein complement(4687740..4687955) Rhodopirellula baltica SH 1 1796551 NP_868558.1 CDS sigW NC_005027.1 4688029 4688784 D PMID: 8432708 PMID: 7961421 best DB hits: BLAST: swissprot:Q45585; SIGW_BACSU RNA POLYMERASE SIGMA FACTOR SIGW; E=1e-15 ddbj:BAB03982.1; (AP001507) RNA polymerase ECF-type sigma factor; E=5e-13 gb:AAF18265.1; U22895_1 (U22895) alternative sigma factor AlgU; E=3e-10 COG: BS_sigW; COG1595 DNA-directed RNA polymerase specialized sigma; E=1e-16 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=2.9e-11; RNA polymerase sigma factor sigW 4688029..4688784 Rhodopirellula baltica SH 1 1794112 NP_868559.1 CDS RB8818 NC_005027.1 4688839 4689021 R hypothetical protein complement(4688839..4689021) Rhodopirellula baltica SH 1 1790725 NP_868560.1 CDS RB8819 NC_005027.1 4689011 4689157 R hypothetical protein complement(4689011..4689157) Rhodopirellula baltica SH 1 1790247 NP_868561.1 CDS RB8820 NC_005027.1 4689239 4690069 D best DB hits: BLAST: pir:S75136; sensory transduction histidine kinase slr2104 -; E=5e-05 swissprot:P39663; SPHR_SYNP7 ALKALINE PHOSPHATASE SYNTHESIS; E=8e-05 ddbj:BAB09274.1; (AB011485) histidine kinase-like protein; E=1e-04 COG: slr2104_4; COG0784 CheY-like receiver domains; E=4e-06 VC0719; COG0745 Response regulators consisting of a CheY-like; E=2e-05 slr1042; COG0784 CheY-like receiver domains; E=5e-05 PFAM: PF02599; Carbon storage regulator; E=0.2 PF00072; Response regulator receiver d; E=1.7e-10; sensory transduction histidine kinase 4689239..4690069 Rhodopirellula baltica SH 1 1794482 NP_868562.1 CDS RB8821 NC_005027.1 4690159 4690344 D hypothetical protein 4690159..4690344 Rhodopirellula baltica SH 1 1797042 NP_868563.1 CDS xynE NC_005027.1 4690285 4691280 R PMID: 3139632 PMID: 7664125 best DB hits: BLAST: swissprot:Q10614; YC88_MYCTU HYPOTHETICAL 49.6 KDA PROTEIN RV1288; E=2e-08 pir:S58235; endo-1,4-beta-xylanase (EC 3.2.1.8) 1 precursor -; E=2e-07 embl:CAB93667.1; (AJ272430) endoxylanase [Ruminococcus; E=4e-07 COG: yieL; COG2382 Enterochelin esterase and related enzymes; E=0.001; endo-1,4-beta-xylanase 1 precursor complement(4690285..4691280) Rhodopirellula baltica SH 1 1795661 NP_868564.1 CDS RB8824 NC_005027.1 4691280 4691843 D PMID: 9000374 best DB hits: BLAST: swissprot:P78594; FCA1_CANAL CYTOSINE DEAMINASE (CYTOSINE; E=9e-32 gb:AAC13409.1; (U55193) cytosine deaminase [Saccharomyces; E=8e-30 gb:AAG33626.1; AF312392_1 (AF312392) cytosine deaminase-uracil; E=8e-30 COG: YPR062w; COG0590 Cytosine/adenosine deaminases; E=8e-31 PFAM: PF00383; Cytidine and deoxycytidylate de; E=6.1e-24; cytosine deaminase 4691280..4691843 Rhodopirellula baltica SH 1 1795000 NP_868565.1 CDS RB8825 NC_005027.1 4691834 4692952 R PMID: 8445726 best DB hits: BLAST: ddbj:BAA92557.1; (AB037740) KIAA1319 protein [Homo sapiens]; E=0.030 gb:AAF74498.1; AF263462_1 (AF263462) cingulin [Homo sapiens]; E=0.030 embl:CAC14945.1; (AL132825) dJ756N5.1 (Myosin heavy chain protein; E=0.047; transmembrane protein complement(4691834..4692952) Rhodopirellula baltica SH 1 1791784 NP_868566.1 CDS RB8827 NC_005027.1 4693062 4694819 R best DB hits: BLAST: pir:H69086; ABC transporter - Methanobacterium thermoautotrophicum; E=3e-56 swissprot:Q46189; YHG1_CLOPA HYPOTHETICAL PROTEIN IN HYDROGENASE 1; E=3e-52 ddbj:BAB06427.1; (AP001516) ABC transporter [Bacillus halodurans]; E=3e-51 COG: MTH1645; COG0661 Predicted unusual protein kinase; E=3e-57; ABC transporter complement(4693062..4694819) Rhodopirellula baltica SH 1 1791628 NP_868567.1 CDS RB8828 NC_005027.1 4694777 4696435 D PMID: 8590279 best DB hits: BLAST: swissprot:P55660; Y4TF_RHISN PROBABLE AMINO-ACID ABC TRANSPORTER; E=0.095; amino-acid ABC transporter permease Y4TF 4694777..4696435 Rhodopirellula baltica SH 1 1793129 NP_868568.1 CDS RB8833 NC_005027.1 4696475 4697428 D best DB hits: BLAST: embl:CAA86969.1; (Z46881) unknown [Saccharomyces cerevisiae]; E=0.22 PFAM: PF02535; ZIP Zinc transporter; E=0.23; hypothetical protein 4696475..4697428 Rhodopirellula baltica SH 1 1794339 NP_868569.1 CDS czcD NC_005027.1 4697452 4698447 D PMID: 2678100 best DB hits: BLAST: pir:G72363; cation efflux system protein - Thermotoga maritima; E=4e-37 pir:H71078; probable cation efflux system protein czcD - Pyrococcus; E=4e-37 pir:C83595; probable cation efflux system protein PA0397 [imported]; E=9e-37 COG: TM0538; COG1230 Co/Zn/Cd efflux system component; E=4e-38 Rv2025c; COG0053 Predicted Co/Zn/Cd cation transporters; E=2e-10 PA1297; COG1230 Co/Zn/Cd efflux system component; E=4e-10 PFAM: PF01545; Cation efflux family; E=1.7e-65; cation efflux system protein 4697452..4698447 Rhodopirellula baltica SH 1 1790698 NP_868570.1 CDS RB8835 NC_005027.1 4698524 4700386 D best DB hits: BLAST: embl:CAB99170.1; (AL390188) secreted alkaline; E=0.003 embl:CAC18240.1; (AL451018) conserved hypothetical protein; E=0.004 ddbj:BAA06483.1; (D30808) unknown [Bacillus subtilis]; E=0.10 PFAM: PF02908; Purple acid phosphatase, N-term; E=0.89 PF00041; Fibronectin type III domain; E=0.42; secreted alkaline phosphatase (fragment) 4698524..4700386 Rhodopirellula baltica SH 1 1795761 NP_868571.1 CDS RB8838 NC_005027.1 4700391 4701458 R best DB hits: BLAST: pir:T09933; nucleotide pyrophosphatase homolog T16L4.210 -; E=5e-04 pir:T33724; hypothetical protein - Zymomonas mobilis ----- gb:; E=0.001 pir:B82537; phosphodiesterase-nucleotide pyrophosphatase precursor; E=0.019 PFAM: PF01676; Metalloenzyme superfamily; E=0.0082; nucleotide pyrophosphatase-like protein complement(4700391..4701458) Rhodopirellula baltica SH 1 1794504 NP_868572.1 CDS RB8840 NC_005027.1 4701445 4701729 D PMID: 9395090 best DB hits: BLAST: pir:G72240; hypothetical protein TM1564 - Thermotoga maritima; E=3e-04 embl:CAA58988.1; (X84195) acylphosphatase [Homo sapiens]; E=9e-04 swissprot:P00818; ACYM_HORSE ACYLPHOSPHATASE, MUSCLE TYPE; E=0.001 COG: TM1564; COG1254 Acylphosphatases; E=3e-05 PFAM: PF00708; Acylphosphatase; E=0.02; acylphosphatase 4701445..4701729 Rhodopirellula baltica SH 1 1793033 NP_868573.1 CDS gyrA NC_005027.1 4701844 4704855 R PMID: 2987847 best DB hits: BLAST: swissprot:P05653; GYRA_BACSU DNA GYRASE SUBUNIT A ----- pir:; E=0.0 swissprot:P48372; GYRA_PSEAE DNA GYRASE SUBUNIT A ----- pir:; E=0.0 gb:AAC34892.1; (AF085683) DNA gyrase A subunit [Methylovorus sp.; E=0.0 COG: BS_gyrA; COG0188 DNA gyrase (topoisomerase II) A subunit; E=0.0 PFAM: PF00521; DNA gyrase/topoisomerase IV, su; E=1.3e-246; DNA gyrase subunit A complement(4701844..4704855) Rhodopirellula baltica SH 1 1791260 NP_868574.1 CDS RB8843 NC_005027.1 4705018 4706850 D best DB hits: BLAST: embl:CAA72104.1; (Y11218) stage V sporulation protein K [Bacillus; E=1e-49 swissprot:O69733; Y2G8_MYCTU HYPOTHETICAL 62.4 KDA PROTEIN RV3868; E=1e-49 embl:CAB96009.1; (AL360055) hypothetical protein [Streptomyces; E=2e-49 COG: Rv3868; COG0464 ATPases of the AAA+ class; E=1e-50 slr0156; COG0542 ATPases with chaperone activity, ATP-binding domain; E=7e-05 AF0477; COG0464 ATPases of the AAA+ class; E=0.006 PFAM: PF00004; ATPase associated with va; E=8.9e-22; stage V sporulation protein K 4705018..4706850 Rhodopirellula baltica SH 1 1793103 NP_868575.1 CDS RB8846 NC_005027.1 4706923 4707834 R hypothetical protein complement(4706923..4707834) Rhodopirellula baltica SH 1 1795404 NP_868576.1 CDS ubiE NC_005027.1 4707844 4708572 R best DB hits: BLAST: gb:AAK03770.1; (AE006205) UbiE [Pasteurella multocida]; E=0.011 embl:CAB86120.1; (AL163003) spermidine synthase; E=0.050 pir:G83392; hypothetical protein PA2034 [imported] - Pseudomonas; E=0.098; ubiquinone/menaquinone biosynthesis methyltransferase UbiE complement(4707844..4708572) Rhodopirellula baltica SH 1 1791322 NP_868577.1 CDS RB8849 NC_005027.1 4708527 4709513 R hypothetical protein complement(4708527..4709513) Rhodopirellula baltica SH 1 1795934 NP_868578.1 CDS hpaG NC_005027.1 4709464 4710327 R PMID: 8550403 best DB hits: BLAST: embl:CAC24092.1; (AL512982) hypothetical [Sulfolobus; E=1e-48 embl:CAB55723.1; (AL117387) hypothetical protein SCF41.20c; E=3e-18 pir:T45421; probable 2-hydroxyhepta-2,4-diene-1,7- dioate isomaerase; E=1e-10 COG: Rv2993c; COG0179 2-keto-4-pentenoate; E=2e-11 PFAM: PF01557; Fumarylacetoacetate (FAA) hydro; E=0.0074; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase complement(4709464..4710327) Rhodopirellula baltica SH 1 1797156 NP_868579.1 CDS chsA NC_005027.1 4710412 4711515 R PMID: 8108524 best DB hits: BLAST: pir:C75587; probable chalcone synthase - Deinococcus radiodurans; E=5e-46 pir:A75315; probable chalcone synthase - Deinococcus radiodurans; E=3e-35 gb:AAD43969.1; AF121274_1 (AF121274) chalcone synthase; E=1e-33 COG: DRA0326; COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III; E=5e-47 PFAM: PF00195; Chalcone and stilbene synthas; E=1.3e-28 PF02797; Chalcone and stilbene synthas; E=2.9e-25; chalcone synthase complement(4710412..4711515) Rhodopirellula baltica SH 1 1796774 NP_868580.1 CDS RB8854 NC_005027.1 4711512 4712861 R best DB hits: BLAST: pir:D70549; hypothetical protein Rv0561c - Mycobacterium; E=0.12 PFAM: PF02737; 3-hydroxyacyl-CoA dehydrogenase; E=0.26 PF01494; FAD binding domain; E=0.039 PF00070; Pyridine nucleotide-disulphide; E=2.9e-09; FAD-containing oxidoreductase complement(4711512..4712861) Rhodopirellula baltica SH 1 1792314 NP_868581.1 CDS RB8857 NC_005027.1 4712858 4713613 R best DB hits: BLAST: pir:D75587; hypothetical protein - Deinococcus radiodurans (strain; E=5e-04 pir:F75277; ubiquinonemenaquinone biosynthesis methyltransferase -; E=0.11 COG: DRA0327; COG0500 SAM-dependent methyltransferases; E=5e-05; hypothetical protein complement(4712858..4713613) Rhodopirellula baltica SH 1 1795568 NP_868582.1 CDS ldhA NC_005027.1 4713610 4714608 R Catalyzes the reduction of sulfopyruvate to (R)-sulfolactate much more efficiently than the reverse reaction. Also catalyzes the reduction of oxaloacetate, alpha-ketoglutarate, and to a much lower extent, KHTCA, but not pyruvate. Involved in the biosynthes; D-lactate dehydrogenase complement(4713610..4714608) Rhodopirellula baltica SH 1 1791660 NP_868583.1 CDS lgt NC_005027.1 4714690 4716168 R PMID: 7896715 best DB hits: BLAST: swissprot:P72846; LGT_SYNY3 PROBABLE PROLIPOPROTEIN DIACYLGLYCERYL; E=4e-07 pir:G70324; prolipoprotein diacylglyceryl transferase - Aquifex; E=3e-06 pir:D75473; prolipoprotein diacylglyceryl transferase - Deinococcus; E=8e-06 COG: sll1187; COG0682 Prolipoprotein diacylglyceryltransferase; E=4e-08 PFAM: PF01790; Prolipoprotein diacylglyceryl transf; E=7e-23; prolipoprotein diacylglyceryl transferase complement(4714690..4716168) Rhodopirellula baltica SH 1 1795106 NP_868584.1 CDS RB8863 NC_005027.1 4716340 4716639 R signal peptide complement(4716340..4716639) Rhodopirellula baltica SH 1 1790155 NP_868585.1 CDS RB8864 NC_005027.1 4716455 4716658 D signal peptide 4716455..4716658 Rhodopirellula baltica SH 1 1795640 NP_868586.1 CDS RB8865 NC_005027.1 4716709 4716891 R hypothetical protein complement(4716709..4716891) Rhodopirellula baltica SH 1 1791658 NP_868587.1 CDS RB8866 NC_005027.1 4716964 4718301 D best DB hits: BLAST: pir:T44513; hypothetical protein 5P [imported] - Plesiomonas; E=3e-21 gb:AAG17422.1; AF285971_6 (AF285971) WbgV [Shigella sonnei]; E=4e-21 gb:AAA84874.1; (U34305) ORF6; Method: conceptual translation; E=4e-14; hypothetical protein 4716964..4718301 Rhodopirellula baltica SH 1 1797200 NP_868588.1 CDS RB8870 NC_005027.1 4718340 4719470 D best DB hits: BLAST: swissprot:Q9RVM9; MRP_DEIRA MRP PROTEIN HOMOLOG ----- pir:; E=1e-60 pir:B82576; polysaccharide export protein XF2301 [imported] -; E=3e-56 pir:A64114; probable ATPase mrp - Haemophilus influenzae (strain Rd; E=2e-53 COG: XF2301; COG0489 ATPases involved in chromosome partitioning; E=3e-57 PFAM: PF02374; Anion-transporting ATPase; E=0.097 PF01209; ubiE/COQ5 methyltransferase f; E=0.6 PF00991; ParA family ATPase; E=0.041; Mrp protein homolog- chromosome partitioning ATPase 4718340..4719470 Rhodopirellula baltica SH 1 1792732 NP_868589.1 CDS fabG NC_005027.1 4719525 4720280 D PMID: 8759840 best DB hits: BLAST: pir:H75014; 3-oxoacyl-[acyl-carrier-protein] reductase PAB1085 -; E=6e-34 swissprot:P16543; DHK2_STRVN GRANATICIN POLYKETIDE SYNTHASE; E=9e-33 gb:AAC44307.1; (U59433) 3-ketoacyl-acyl carrier protein reductase; E=2e-30 COG: PAB1085; COG1028 Dehydrogenases with different specificities; E=6e-35 BH2491; COG1028 Dehydrogenases with different specificities (related; E=3e-31 BS_fabG; COG1028 Dehydrogenases with different specificities; E=3e-31 PFAM: PF00106; short chain dehydrogenase; E=1.1e-62; 3-oxoacyl-ACP reductase 4719525..4720280 Rhodopirellula baltica SH 1 1796356 NP_868590.1 CDS glpF NC_005027.1 4720343 4721158 D PMID: 8436953 best DB hits: BLAST: swissprot:Q9X1E3; GLPF_THEMA PROBABLE GLYCEROL UPTAKE FACILITATOR; E=3e-37 swissprot:P18156; GLPF_BACSU GLYCEROL UPTAKE FACILITATOR PROTEIN; E=4e-33 ddbj:BAB04811.1; (AP001510) glycerol uptake facilitator [Bacillus; E=5e-33 COG: TM1429; COG0580 Glycerol uptake facilitator and related permeases; E=3e-38 PFAM: PF00230; Major intrinsic protein; E=6.1e-57; glycerol uptake facilitator protein 4720343..4721158 Rhodopirellula baltica SH 1 1792765 NP_868591.1 CDS RB8873 NC_005027.1 4721200 4723605 R PMID: 7984107 best DB hits: BLAST: pir:S75136; sensory transduction histidine kinase slr2104 -; E=2e-56 pir:S75525; sensory transduction histidine kinase sll1228 -; E=4e-50 pir:E82198; sensor histidine kinaseresponse regulator VC1445; E=5e-46 COG: VC1349_2; COG0642 Sensory transduction histidine kinases; E=2e-43 PFAM: PF00785; PAC motif; E=0.00017 PF00512; His Kinase A (phosphoacceptor; E=1.1e-25 PF02518; Histidine kinase-, DNA gyrase; E=8.9e-44; sensory transduction histidine kinase complement(4721200..4723605) Rhodopirellula baltica SH 1 1796038 NP_868592.1 CDS RB8876 NC_005027.1 4723629 4723892 D hypothetical protein 4723629..4723892 Rhodopirellula baltica SH 1 1792929 NP_868593.1 CDS RB8877 NC_005027.1 4723713 4723982 R hypothetical protein complement(4723713..4723982) Rhodopirellula baltica SH 1 1793586 NP_868594.1 CDS yniI NC_005027.1 4724071 4725009 D best DB hits: BLAST: gb:AAK05448.1; AE006367_4 (AE006367) HYPOTHETICAL PROTEIN; E=3e-10 pir:C69789; hypothetical protein ydjG - Bacillus subtilis -----; E=3e-09 ddbj:BAB05525.1; (AP001513) BH1806~unknown conserved protein; E=5e-09; hypothetical protein 4724071..4725009 Rhodopirellula baltica SH 1 1790072 NP_868595.1 CDS ydjG NC_005027.1 4724951 4725979 D best DB hits: BLAST: pir:C69789; hypothetical protein ydjG - Bacillus subtilis -----; E=2e-07 embl:CAA76859.1; (Y17797) hypothetical protein [Enterococcus; E=2e-07 gb:AAK05448.1; AE006367_4 (AE006367) HYPOTHETICAL PROTEIN; E=8e-04; hypothetical protein 4724951..4725979 Rhodopirellula baltica SH 1 1796193 NP_868596.1 CDS RB8881 NC_005027.1 4726013 4726480 R hypothetical protein complement(4726013..4726480) Rhodopirellula baltica SH 1 1795233 NP_868597.1 CDS pilE1 NC_005027.1 4726461 4727510 R PMID: 1906968 best DB hits: BLAST: pir:S22102; fimbrial protein MS11-C3MS11-G2 precursor - Neisseria; E=0.57 pir:S22103; fimbrial protein MS11-E1MS11-F3 precursor - Neisseria; E=0.57 pir:S22104; fimbrial protein MS11-E3 precursor - Neisseria; E=0.57 PFAM: PF00114; Pilin (bacterial filament); E=0.42; fimbrial protein MS11-C3/MS11-G2 precursor complement(4726461..4727510) Rhodopirellula baltica SH 1 1794531 NP_868598.1 CDS RB8884 NC_005027.1 4727666 4727878 D hypothetical protein 4727666..4727878 Rhodopirellula baltica SH 1 1796606 NP_868599.1 CDS RB8885 NC_005027.1 4727875 4729392 R best DB hits: BLAST: pir:T34690; hypothetical protein SC1B5.12c SC1B5.12c - Streptomyces; E=2e-63 ddbj:BAB07623.1; (AP001520) BH3904~unknown conserved protein in; E=7e-54 pir:T36920; hypothetical protein SCI7.24c - Streptomyces coelicolor; E=4e-48 COG: BH3904; COG3211 Predicted phosphatase; E=7e-55; phosphatase complement(4727875..4729392) Rhodopirellula baltica SH 1 1793794 NP_868600.1 CDS RB8886 NC_005027.1 4729323 4729475 R hypothetical protein complement(4729323..4729475) Rhodopirellula baltica SH 1 1795677 NP_868601.1 CDS RB8888 NC_005027.1 4729500 4729718 R hypothetical protein complement(4729500..4729718) Rhodopirellula baltica SH 1 1793443 NP_868602.1 CDS phoD NC_005027.1 4729717 4731300 D PMID: 8760916 PMID: 25878 best DB hits: BLAST: swissprot:P42251; PPBD_BACSU ALKALINE PHOSPHATASE D PRECURSOR; E=1e-124 ddbj:BAA06483.1; (D30808) unknown [Bacillus subtilis]; E=1e-110 pir:T50595; probable alkaline phosphatase [imported] - Streptomyces; E=1e-103; alkaline phosphatase 4729717..4731300 Rhodopirellula baltica SH 1 1794345 NP_868603.1 CDS RB8890 NC_005027.1 4731429 4731620 R hypothetical protein complement(4731429..4731620) Rhodopirellula baltica SH 1 1792974 NP_868604.1 CDS RB8891 NC_005027.1 4731627 4731824 R hypothetical protein complement(4731627..4731824) Rhodopirellula baltica SH 1 1790679 NP_868605.1 CDS RB8892 NC_005027.1 4731727 4735809 D best DB hits: BLAST: pir:A83363; probable cytochrome c precursor PA2266 [imported] -; E=6e-09 pir:B81167; cytochrome c552 NMB0717 precursor [similarity] - Neisseria; E=7e-09 pir:F83631; cytochrome c oxidase, subunit II PA0105 [imported] -; E=2e-08 COG: PA2266; COG2010 Cytochrome c, mono- and diheme variants; E=6e-10; cytochrome c precursor 4731727..4735809 Rhodopirellula baltica SH 1 1790543 NP_868606.1 CDS nanH NC_005027.1 4736087 4737343 D PMID: 8093075 best DB hits: BLAST: ddbj:BAA05853.1; (D28493) neuraminidase precursor [Bacteroides; E=4e-90 pir:JC2500; exo-alpha-sialidase (EC 3.2.1.18) precursor -; E=8e-89 swissprot:P31206; NANH_BACFR SIALIDASE (NEURAMINIDASE) -----; E=2e-68 PFAM: PF02012; BNR repeat; E=0.038; neuraminidase precursor 4736087..4737343 Rhodopirellula baltica SH 1 1795974 NP_868607.1 CDS RB8898 NC_005027.1 4737468 4738433 D best DB hits: BLAST: pir:E82335; hypothetical protein VC0334 [imported] - Vibrio cholerae; E=3e-58 PFAM: PF02272; DHHA1 domain; E=0.84; hypothetical protein 4737468..4738433 Rhodopirellula baltica SH 1 1791456 NP_868608.1 CDS RB8900 NC_005027.1 4738478 4738645 D hypothetical protein 4738478..4738645 Rhodopirellula baltica SH 1 1792658 NP_868609.1 CDS RB8901 NC_005027.1 4738703 4740295 D best DB hits: BLAST: pir:S75223; hypothetical protein sll1835 - Synechocystis sp. (strain; E=0.16; hypothetical protein 4738703..4740295 Rhodopirellula baltica SH 1 1794973 NP_868610.1 CDS RB8902 NC_005027.1 4740226 4740474 R hypothetical protein complement(4740226..4740474) Rhodopirellula baltica SH 1 1790692 NP_868611.1 CDS RB8903 NC_005027.1 4740607 4740744 R hypothetical protein complement(4740607..4740744) Rhodopirellula baltica SH 1 1795942 NP_868612.1 CDS tyv NC_005027.1 4740862 4741962 D PMID: 8541300 PMID: 9004408 best DB hits: BLAST: gb:AAB48319.1; (U29691) CDP-tyvelose epimerase [Yersinia; E=5e-14 pir:B33604; rfbE protein - Salmonella sp; E=1e-11 swissprot:P14169; RFBE_SALTI CDP-TYVELOSE-2-EPIMERASE -----; E=1e-11 COG: PAB1299; COG0451 Nucleoside-diphosphate-sugar epimerases; E=3e-09 PAB0785; COG1088 dTDP-D-glucose 4,6-dehydratase; E=7e-08 PH1742; COG0451 Nucleoside-diphosphate-sugar epimerases; E=2e-07 PFAM: PF01370; NAD dependent epimerase/dehydratase; E=2.5e-05; CDP-tyvelose epimerase 4740862..4741962 Rhodopirellula baltica SH 1 1796176 NP_868613.1 CDS RB8905 NC_005027.1 4742073 4742894 D best DB hits: BLAST: embl:CAC15463.1; (AJ294477) polyprenol phosphate; E=6e-18 pir:B70945; hypothetical protein Rv2051c - Mycobacterium; E=2e-16 embl:CAB11300.1; (Z98604) hypothetical protein MLCB2052.02; E=2e-14 COG: Rv2051c_2; COG0463 Glycosyltransferases involved in cell wall; E=6e-17 PFAM: PF00535; Glycosyl transferase; E=4.6e-17; polyprenol phosphate mannosyl transferase 1 (Ppm1) 4742073..4742894 Rhodopirellula baltica SH 1 1791893 NP_868614.1 CDS RB8908 NC_005027.1 4743202 4743357 D hypothetical protein 4743202..4743357 Rhodopirellula baltica SH 1 1791687 NP_868615.1 CDS RB8909 NC_005027.1 4743469 4745151 D best DB hits: BLAST: ddbj:BAB05126.1; (AP001511) BH1407~unknown conserved protein; E=2e-60 pir:H71283; conserved hypothetical integral membrane protein TP0771; E=1e-47 embl:CAC27413.1; (AJ307315) membrane protein; E=4e-47 COG: BH1407; COG1283 Na+/phosphate symporter; E=2e-61 PFAM: PF02690; Na+/Pi-cotransporter; E=1.4e-26; Na/phosphate symporter 4743469..4745151 Rhodopirellula baltica SH 1 1795444 NP_868616.1 CDS RB8910 NC_005027.1 4745087 4745500 D hypothetical protein 4745087..4745500 Rhodopirellula baltica SH 1 1790305 NP_868617.1 CDS trpF NC_005027.1 4745692 4746429 R PMID: 96003619 PMID: 97309356 best DB hits: BLAST: pdb:1DL3; A Chain A, Crystal Structure Of Mutually Generated; E=2e-19 swissprot:Q56320; TRPF_THEMA N-(5'-PHOSPHORIBOSYL)ANTHRANILATE; E=5e-19 pir:E81935; probable phosphoribosylanthranilate isomerase (EC; E=6e-18 COG: TM0139; COG0135 Phosphoribosylanthranilate isomerase; E=5e-20 PFAM: PF00697; N-(5'phosphoribosyl)anthranilate (PR; E=7.3e-41; N-(5'-phosphoribosyl)anthranilate isomerase complement(4745692..4746429) Rhodopirellula baltica SH 1 1793793 NP_868618.1 CDS RB8914 NC_005027.1 4746481 4747422 D hypothetical protein 4746481..4747422 Rhodopirellula baltica SH 1 1792067 NP_868619.1 CDS RB8917 NC_005027.1 4747435 4747659 D hypothetical protein 4747435..4747659 Rhodopirellula baltica SH 1 1795586 NP_868620.1 CDS lueS NC_005027.1 4747666 4750518 D PMID: 1317842 best DB hits: BLAST: ddbj:BAB17162.1; (AP002868) leucyl-tRNA synthetase; E=0.0 embl:CAB77903.1; (AL161500) leucyl tRNA synthetase; E=0.0 gb:AAK04914.1; AE006315_3 (AE006315) leucyl-tRNA synthetase (EC; E=0.0 COG: TP0586; COG0495 Leucyl-tRNA synthetase; E=0.0 PFAM: PF00133; tRNA synthetases class I (I, L; E=1.4e-39; leucyl-tRNA synthetase 4747666..4750518 Rhodopirellula baltica SH 1 1795825 NP_868621.1 CDS RB8921 NC_005027.1 4750749 4751930 R best DB hits: BLAST: embl:CAB69781.1; (AL137187) membrane protein; E=2e-18 pir:T36253; probable membrane protein - Streptomyces coelicolor; E=1e-16 pir:T21781; hypothetical protein F35E2.6 - Caenorhabditis elegans; E=4e-06 COG: BS_yrhL; COG1835 Predicted acyltransferases; E=1e-05; membrane protein- a lipopolysaccharide biosynthesis acyltransferase complement(4750749..4751930) Rhodopirellula baltica SH 1 1796853 NP_868622.1 CDS RB8923 NC_005027.1 4751924 4752370 D hypothetical protein 4751924..4752370 Rhodopirellula baltica SH 1 1789903 NP_868623.2 CDS bcpC NC_005027.1 4752367 4753608 D catalyzes the interconversion of 3-phosphoglycerate and 2-phosphoglycerate; this enzyme does not require the cofactor 2,3-bisphosphoglycerate as a phosphate donor; BPG-independent PGAM; aPGAM; cofactor-independent phosphoglycerate mutase 4752367..4753608 Rhodopirellula baltica SH 1 1790801 NP_868624.1 CDS ask NC_005027.1 4753687 4755474 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; aspartate kinase 4753687..4755474 Rhodopirellula baltica SH 1 1790510 NP_868625.1 CDS pbrT NC_005027.1 4755670 4757094 R PMID: 21429239 best DB hits: BLAST: embl:CAC28871.1; (AJ278984) PbrT protein [Ralstonia; E=2e-05 pir:B82990; hypothetical protein PA5248 [imported] - Pseudomonas; E=0.15 PFAM: PF00034; Cytochrome c; E=0.04; PbrT protein- c-type cytochrome complement(4755670..4757094) Rhodopirellula baltica SH 1 1796361 NP_868626.1 CDS RB8928 NC_005027.1 4757129 4758355 R best DB hits: BLAST: pir:S74905; hypothetical protein slr2060 - Synechocystis sp. (strain; E=4e-10 ddbj:BAB05354.1; (AP001512) BH1635~unknown conserved protein; E=0.004 gb:AAF73599.1; (AE002342) 1-acyl-sn-glycerol-3-phosphate; E=0.004 COG: BH1635; COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; E=4e-04 PFAM: PF01553; Acyltransferase; E=2.7e-09; 1-acyl-sn-glycerol-3-phosphate acyltransferase complement(4757129..4758355) Rhodopirellula baltica SH 1 1796969 NP_868627.1 CDS RB8929 NC_005027.1 4758352 4759884 R PMID: 1835671 best DB hits: BLAST: pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=3e-44 pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=2e-42 swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=7e-42 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=3e-45 PFAM: PF01740; STAS domain; E=0.19 PF00069; Protein kinase domain; E=7.3e-58; protein kinase yloP- serine/threonine protein kinase complement(4758352..4759884) Rhodopirellula baltica SH 1 1792193 NP_868628.1 CDS RB8930 NC_005027.1 4759922 4760098 D hypothetical protein 4759922..4760098 Rhodopirellula baltica SH 1 1792411 NP_868629.1 CDS RB8932 NC_005027.1 4760145 4760954 D best DB hits: BLAST: ddbj:BAA84086.1; (AB032065) hypothetical protein [Streptomyces; E=3e-15 embl:CAB61872.1; (AL133252) hypothetical protein SCE46.21; E=7e-14 gb:AAC15821.1; (U44977) unknown [Prochlorococcus marinus]; E=7e-13 COG: sll1095; COG3222 Uncharacterized BCR; E=5e-08; hypothetical protein 4760145..4760954 Rhodopirellula baltica SH 1 1795589 NP_868630.1 CDS RB8935 NC_005027.1 4760956 4762170 D PMID: 8682785 best DB hits: BLAST: swissprot:P33642; Y9E8_PSEAE PROBABLE D-AMINO ACID OXIDASE PA4548; E=5e-27 ddbj:BAB05760.1; (AP001514) BH2041~unknown conserved protein; E=6e-26 gb:AAB39269.1; (L48934) homolgous to D-amino acid dehydrogenase; E=1e-25 COG: PA4548; COG0665 Glycine/D-amino acid oxidases (deaminating); E=5e-28 PFAM: PF01494; FAD binding domain; E=0.022 PF02254; KTN NAD-binding domain; E=0.00026 PF00070; Pyridine nucleotide-disulphide; E=0.00011; D-amino acid oxidase 4760956..4762170 Rhodopirellula baltica SH 1 1793643 NP_868631.1 CDS noxA NC_005027.1 4762195 4763877 R best DB hits: BLAST: pir:B82434; probable NADH oxidase VCA0644 [imported] - Vibrio; E=1e-102 gb:AAK04884.1; AE006312_4 (AE006312) NADH oxidase [Lactococcus; E=3e-99 gb:AAB90837.1; (AE001077) NADH oxidase (noxA-3) [Archaeoglobus; E=2e-75 COG: VCA0644_1; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; E=5e-87 BH0613; COG1251 NAD(P)H-nitrite reductase; E=1e-18 PFAM: PF01266; D-amino acid oxidase; E=0.47 PF02032; Phytoene dehydrogenase related; E=0.14 PF00070; Pyridine nucleotide-disulphide; E=8.8e-72; NADH oxidase complement(4762195..4763877) Rhodopirellula baltica SH 1 1792835 NP_868632.1 CDS RB8939 NC_005027.1 4763963 4764310 D PMID: 8231807 PMID: 9457888 best DB hits: BLAST: pir:B70850; probable transcriptional regulator Rv0081 - Mycobacterium; E=7e-07 pir:D82766; transcriptional regulator ArsR family XF0767 [imported] -; E=1e-06 pir:E70585; probable transcriptional regulator Rv2358 - Mycobacterium; E=4e-06 COG: Rv0081; COG0640 Predicted transcriptional regulators; E=7e-08 PFAM: PF01022; Bacterial regulatory protein, arsR f; E=1.8e-18; transcriptional regulator 4763963..4764310 Rhodopirellula baltica SH 1 1790984 NP_868633.1 CDS RB8941 NC_005027.1 4764387 4766054 D PMID: 96118391 PMID: 20363527 best DB hits: BLAST: pir:S27619; ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.-) -; E=2e-65 pir:S27612; ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.-) -; E=6e-61 pdb:1EYY; A Chain A, Crystal Structure Of The Nadp+ Dependent; E=5e-54 COG: PA2217; COG1012 NAD-dependent aldehyde dehydrogenases; E=4e-54 PFAM: PF00171; Aldehyde dehydrogenase; E=3.5e-08; ketoglutarate semialdehyde dehydrogenase 4764387..4766054 Rhodopirellula baltica SH 1 1795116 NP_868634.1 CDS RB8943 NC_005027.1 4766175 4766504 R hypothetical protein complement(4766175..4766504) Rhodopirellula baltica SH 1 1794026 NP_868635.1 CDS RB8945 NC_005027.1 4766541 4767818 D hypothetical protein 4766541..4767818 Rhodopirellula baltica SH 1 1794146 NP_868636.1 CDS RB8947 NC_005027.1 4767992 4774183 D best DB hits: PFAM: PF02058; Guanylin precursor; E=0.81; hypothetical protein 4767992..4774183 Rhodopirellula baltica SH 1 1796546 NP_868637.1 CDS RB8957 NC_005027.1 4774288 4775019 D hypothetical protein 4774288..4775019 Rhodopirellula baltica SH 1 1796651 NP_868638.1 CDS RB8959 NC_005027.1 4775133 4777121 R signal peptide complement(4775133..4777121) Rhodopirellula baltica SH 1 1790599 NP_868639.1 CDS RB8964 NC_005027.1 4777134 4777445 R hypothetical protein complement(4777134..4777445) Rhodopirellula baltica SH 1 1793330 NP_868640.1 CDS RB8965 NC_005027.1 4777180 4777473 D hypothetical protein 4777180..4777473 Rhodopirellula baltica SH 1 1791685 NP_868641.1 CDS groEL NC_005027.1 4777493 4779475 D PMID: 8097179 best DB hits: BLAST: swissprot:O67943; CH60_AQUAE 60 KDA CHAPERONIN (PROTEIN CPN60); E=1e-160 swissprot:P35471; CH63_RHIME 60 KDA CHAPERONIN C (PROTEIN CPN60 C); E=1e-159 swissprot:P45746; CH60_THETH 60 KDA CHAPERONIN (PROTEIN CPN60); E=1e-159 COG: aq_2200; COG0459 Chaperonin GroEL (HSP60 family); E=1e-161 PFAM: PF00118; TCP-1/cpn60 chaperonin family; E=3.3e-207; molecular chaperone GroEL 4777493..4779475 Rhodopirellula baltica SH 1 1791503 NP_868642.1 CDS groES NC_005027.1 4779554 4779859 D PMID: 7913076 PMID: 9387235 best DB hits: BLAST: swissprot:P40172; CH10_STRCO 10 KDA CHAPERONIN (PROTEIN CPN10); E=1e-23 swissprot:P26195; CH10_LEGMI 10 KD CHAPERONIN (PROTEIN CPN10); E=5e-22 swissprot:Q07200; CH10_BACST 10 KD CHAPERONIN (PROTEIN CPN10); E=6e-22 COG: BS_groES; COG0234 Co-chaperonin GroES (HSP10); E=1e-22 PFAM: PF00166; Chaperonin 10 Kd subunit; E=5.4e-52; molecular chaperone GroES 4779554..4779859 Rhodopirellula baltica SH 1 1790059 NP_868643.1 CDS groEL NC_005027.1 4779905 4781527 D PMID: 8097179 best DB hits: BLAST: swissprot:P35471; CH63_RHIME 60 KDA CHAPERONIN C (PROTEIN CPN60 C); E=1e-163 gb:AAF64160.1; AF239163_2 (AF239163) GroEL [Rhizobium; E=1e-163 swissprot:P77829; CH61_BRAJA 60 KD CHAPERONIN 1 (PROTEIN CPN60 1); E=1e-162 COG: TM0506; COG0459 Chaperonin GroEL (HSP60 family); E=1e-163 PFAM: PF00118; TCP-1/cpn60 chaperonin family; E=4.9e-226; molecular chaperone GroEL 4779905..4781527 Rhodopirellula baltica SH 1 1796490 NP_868644.1 CDS dnaJ NC_005027.1 4781697 4782872 D PMID: 9061015 best DB hits: BLAST: pir:A83052; DnaJ protein PA4760 [imported] - Pseudomonas aeruginosa; E=6e-83 swissprot:Q9ZFC5; DNAJ_METSS CHAPERONE PROTEIN DNAJ ----- gb:; E=3e-81 gb:AAG54315.1; AE005178_5 (AE005178) chaperone with DnaK; heat; E=1e-80 COG: PA4760; COG0484 Molecular chaperones (contain C-terminal Zn finger; E=5e-84 PFAM: PF00226; DnaJ domain; E=2.8e-32 PF00684; DnaJ central domain (4 repeats); E=1.3e-22 PF01556; DnaJ C terminal region; E=7e-58; molecular chaperone DnaJ 4781697..4782872 Rhodopirellula baltica SH 1 1795644 NP_868645.1 CDS grpE NC_005027.1 4782869 4783471 D PMID: 10024539 PMID: 2108432 PMID: 1339421 best DB hits: BLAST: swissprot:Q9ZCT4; GRPE_RICPR GRPE PROTEIN (HSP-70 COFACTOR); E=3e-19 swissprot:P95333; GRPS_MYXXA GRPS PROTEIN ----- gb: AAC64204.1; E=2e-18 gb:AAC72386.1; (AF098635) chaperone GrpE type 1 [Nicotiana; E=3e-18 COG: RP629; COG0576 Molecular chaperone GrpE (heat shock protein); E=3e-20 PFAM: PF01025; GrpE; E=1e-49; molecular chaperone GrpE 4782869..4783471 Rhodopirellula baltica SH 1 1797169 NP_868646.1 CDS RB8975 NC_005027.1 4783556 4783888 R signal peptide complement(4783556..4783888) Rhodopirellula baltica SH 1 1793412 NP_868647.1 CDS RB8976 NC_005027.1 4783568 4783846 D best DB hits: BLAST: pir:F72411; conserved hypothetical protein - Thermotoga maritima; E=3e-08 embl:CAB90971.1; (AL355832) hypothetical protein SCE22.04; E=6e-07 pir:B70601; hypothetical protein Rv0991c - Mycobacterium; E=2e-06 COG: TM0144; COG2331 Uncharacterized BCR; E=3e-09; hypothetical protein 4783568..4783846 Rhodopirellula baltica SH 1 1792901 NP_868648.1 CDS RB8978 NC_005027.1 4783977 4784783 D best DB hits: BLAST: pir:E83520; conserved hypothetical protein PA1012 [imported] -; E=4e-34 embl:CAB65404.1; (AJ012052) YycJ protein [Staphylococcus aureus]; E=3e-28 embl:CAB64977.1; (AJ012050) YycJ protein [Enterococcus faecalis]; E=2e-27 COG: PA1012; COG1235 Metal-dependent hydrolases of the beta-lactamase; E=4e-35 PAB0518; COG1237 Metal-dependent hydrolases of the beta-lactamase; E=0.005 BS_yqgX; COG0491 Zn-dependent hydrolases, including glyoxylases; E=0.007 PFAM: PF00753; Metallo-beta-lactamase superfamil; E=6.5e-14; metal-dependent hydrolase 4783977..4784783 Rhodopirellula baltica SH 1 1794157 NP_868649.1 CDS RB8979 NC_005027.1 4785013 4786671 D PMID: 2504697 PMID: 8436113 best DB hits: BLAST: swissprot:O34607; SDHA_BACSU PROBABLE L-SERINE DEHYDRATASE, ALPHA; E=1e-26 ddbj:BAB06215.1; (AP001515) L-serine dehydratase alpha subunit; E=9e-26 gb:AAK04929.1; AE006316_10 (AE006316) alpha-subuni L-serine; E=5e-25 COG: BS_ylpA; COG1760 L-serine deaminase; E=1e-27; L-serine dehydratase, alpha chain 4785013..4786671 Rhodopirellula baltica SH 1 1793599 NP_868650.1 CDS RB8980 NC_005027.1 4786833 4788689 R hypothetical protein complement(4786833..4788689) Rhodopirellula baltica SH 1 1796511 NP_868651.1 CDS moxR NC_005027.1 4788960 4790000 D best DB hits: BLAST: pir:G71146; hypothetical protein PH0385 - Pyrococcus horikoshii; E=3e-58 pir:C83106; conserved hypothetical protein PA4322 [imported] -; E=2e-56 pir:D75008; methanol dehydrogenase regulatory protein (moxr-2); E=3e-56 COG: PH0385; COG0714 MoxR-like ATPases; E=2e-59 PFAM: PF00004; ATPase associated with v; E=0.23 PF01078; Magnesium chelatase, subunit Ch; E=1.9e-12; moxR-like transcriptional regulator protein 4788960..4790000 Rhodopirellula baltica SH 1 1797167 NP_868652.1 CDS RB8985 NC_005027.1 4790156 4790524 D best DB hits: BLAST: pir:A81035; conserved hypothetical protein NMB1852 [imported] -; E=2e-18 gb:AAC78448.1; (AF029361) similar to E. coli ORF, encoded by; E=7e-18 gb:AAC78450.1; (AF029362) similar to E. coli ORF, encoded by; E=2e-17 COG: NMB1852; COG2852 Uncharacterized BCR; E=2e-19; hypothetical protein 4790156..4790524 Rhodopirellula baltica SH 1 1789943 NP_868653.1 CDS RB8987 NC_005027.1 4790710 4790856 R hypothetical protein complement(4790710..4790856) Rhodopirellula baltica SH 1 1794463 NP_868654.1 CDS RB8988 NC_005027.1 4790886 4791797 D best DB hits: BLAST: pir:G70121; conserved hypothetical protein BB0175 - Lyme disease; E=2e-13 swissprot:P71761; YE80_MYCTU HYPOTHETICAL 34.3 KDA PROTEIN RV1480; E=1e-12 pir:D83106; hypothetical protein PA4323 [imported] - Pseudomonas; E=2e-11 COG: BB0175; COG1721 Uncharacterized ACR; E=2e-14 PFAM: PF01882; Protein of unknown function DUF; E=6.5e-23; hypothetical protein 4790886..4791797 Rhodopirellula baltica SH 1 1796466 NP_868655.1 CDS RB8992 NC_005027.1 4791794 4793851 D hypothetical protein 4791794..4793851 Rhodopirellula baltica SH 1 1792511 NP_868656.1 CDS RB8999 NC_005027.1 4793791 4796112 D PMID: 11214968; transmembrane protein 4793791..4796112 Rhodopirellula baltica SH 1 1794803 NP_868657.1 CDS RB9000 NC_005027.1 4794141 4794812 R signal peptide complement(4794141..4794812) Rhodopirellula baltica SH 1 1790107 NP_868658.1 CDS RB9002 NC_005027.1 4796028 4799393 D hypothetical protein 4796028..4799393 Rhodopirellula baltica SH 1 1793043 NP_868659.1 CDS RB9009 NC_005027.1 4799393 4800166 D signal peptide 4799393..4800166 Rhodopirellula baltica SH 1 1791330 NP_868660.1 CDS RB9010 NC_005027.1 4800154 4800963 D signal peptide 4800154..4800963 Rhodopirellula baltica SH 1 1795075 NP_868661.1 CDS RB9011 NC_005027.1 4800960 4802027 D PMID: 92104976 best DB hits: BLAST: pir:A43300; squalene-hopene cyclase (EC 5.4.99.-) - Alicyclobacillus; E=0.089; squalene-hopene cyclase 4800960..4802027 Rhodopirellula baltica SH 1 1791588 NP_868662.1 CDS cycX NC_005027.1 4801715 4804966 D best DB hits: BLAST: pir:F75549; cytochrome c biogenesis protein CycX homolog DR0189; E=1e-15 pir:E69891; cytochrome c biogenesis protein CycX homolog homolog yneN; E=9e-14 swissprot:P35160; RESA_BACSU RESA PROTEIN ----- pir: S45556; E=2e-13 COG: DR0189; COG0526 Thiol-disulfide isomerase and thioredoxins; E=1e-16 PFAM: PF00578; AhpC/TSA family; E=0.072 PF00085; Thioredoxin; E=9.1e-07; cytochrome c biogenesis protein CycX-like protein 4801715..4804966 Rhodopirellula baltica SH 1 1796041 NP_868663.1 CDS RB9013 NC_005027.1 4802188 4802682 R signal peptide complement(4802188..4802682) Rhodopirellula baltica SH 1 1797193 NP_868664.1 CDS RB9015 NC_005027.1 4804993 4805181 D signal peptide 4804993..4805181 Rhodopirellula baltica SH 1 1793259 NP_868665.1 CDS RB9017 NC_005027.1 4805225 4805806 D best DB hits: BLAST: pir:C82583; RNA polymerase sigma-H factor XF2239 [imported] -; E=0.001 embl:CAC01348.1; (AL390975) ECF-subfamily sigma factor; E=0.018 gb:AAC45221.1; (U87307) extracytoplasmic function alternative; E=0.030 COG: XF2239; COG1595 DNA-directed RNA polymerase specialized sigma; E=1e-04 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=0.016 PF00196; Bacterial regulatory proteins,; E=0.13; RNA polymerase sigma-H factor 4805225..4805806 Rhodopirellula baltica SH 1 1796072 NP_868666.1 CDS pknB NC_005027.1 4805803 4807269 D PMID: 7774814 best DB hits: BLAST: swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=4e-41 ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=2e-38 pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=4e-38 COG: BH2504_1; COG0515 Serine/threonine protein kinases; E=2e-39 PFAM: PF00069; Protein kinase domain; E=5.1e-52; serine/threonine-protein kinase pknB 4805803..4807269 Rhodopirellula baltica SH 1 1795387 NP_868667.1 CDS RB9020 NC_005027.1 4807486 4808631 D signal peptide 4807486..4808631 Rhodopirellula baltica SH 1 1790678 NP_868668.1 CDS RB9022 NC_005027.1 4808543 4808899 D hypothetical protein 4808543..4808899 Rhodopirellula baltica SH 1 1790676 NP_868669.1 CDS RB9023 NC_005027.1 4808850 4809074 D hypothetical protein 4808850..4809074 Rhodopirellula baltica SH 1 1792567 NP_868670.1 CDS RB9024 NC_005027.1 4809050 4809190 R hypothetical protein complement(4809050..4809190) Rhodopirellula baltica SH 1 1796061 NP_868671.1 CDS RB9026 NC_005027.1 4809363 4810784 R best DB hits: BLAST: swissprot:O05389; YRBE_BACSU HYPOTHETICAL 37.8 KDA PROTEIN IN; E=2e-08 swissprot:P40332; YISS_BACSU HYPOTHETICAL 37.5 KD PROTEIN IN; E=1e-07 ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=1e-06 COG: BS_yrbE; COG0673 Predicted dehydrogenases and related proteins; E=2e-09 PFAM: PF01408; Oxidoreductase, NAD-bin; E=3.2e-25; NADH-dependent dyhydrogenase complement(4809363..4810784) Rhodopirellula baltica SH 1 1796040 NP_868672.1 CDS RB9029 NC_005027.1 4810823 4813102 D PMID: 10571076 best DB hits: BLAST: embl:CAB08809.1; (Z95398) unknown [Mycobacterium leprae]; E=1e-152 pir:C70838; probable zinc metalloproteinase Rv0198c - Mycobacterium; E=1e-150 ddbj:BAA24495.1; (AB010440) PepO [Porphyromonas gingivalis]; E=1e-142 PFAM: PF01447; Thermolysin metallopeptidase, c; E=0.64 PF01431; Peptidase M13; E=1.3e-88; zinc metalloproteinase 4810823..4813102 Rhodopirellula baltica SH 1 1796826 NP_868673.1 CDS RB9030 NC_005027.1 4813245 4815728 D hypothetical protein 4813245..4815728 Rhodopirellula baltica SH 1 1795655 NP_868674.1 CDS RB9032 NC_005027.1 4815824 4818418 R hypothetical protein complement(4815824..4818418) Rhodopirellula baltica SH 1 1795820 NP_868675.1 CDS RB9034 NC_005027.1 4818355 4821450 D best DB hits: PFAM: PF00515; TPR Domain; E=0.008; hypothetical protein 4818355..4821450 Rhodopirellula baltica SH 1 1790405 NP_868676.1 CDS RB9037 NC_005027.1 4821537 4822571 D best DB hits: BLAST: gb:AAF46853.2; (AE003457) CG4554 gene product [Drosophila; E=0.55 PFAM: PF00515; TPR Domain; E=0.5; hypothetical protein 4821537..4822571 Rhodopirellula baltica SH 1 1795559 NP_868677.1 CDS RB9038 NC_005027.1 4822642 4823103 R hypothetical protein complement(4822642..4823103) Rhodopirellula baltica SH 1 1796404 NP_868678.1 CDS RB9039 NC_005027.1 4823138 4824610 R sulfatase complement(4823138..4824610) Rhodopirellula baltica SH 1 1790708 NP_868679.1 CDS RB9042 NC_005027.1 4824607 4827714 R hypothetical protein complement(4824607..4827714) Rhodopirellula baltica SH 1 1796323 NP_868680.1 CDS RB9047 NC_005027.1 4828072 4829721 D hypothetical protein 4828072..4829721 Rhodopirellula baltica SH 1 1796348 NP_868681.1 CDS RB9050 NC_005027.1 4829676 4829846 R hypothetical protein complement(4829676..4829846) Rhodopirellula baltica SH 1 1795144 NP_868682.1 CDS RB9053 NC_005027.1 4830021 4834586 D best DB hits: BLAST: pir:F69009; probable membrane protein MTH1074 - Methanobacterium; E=1e-19 pir:T28679; fibrinogen-binding protein homolog - Staphylococcus aureus; E=0.008 pir:B75556; hypothetical protein - Deinococcus radiodurans (strain R1); E=0.059 PFAM: PF01345; Domain of unknown function DUF11; E=0.14; hypothetical protein 4830021..4834586 Rhodopirellula baltica SH 1 1795257 NP_868683.1 CDS RB9057 NC_005027.1 4834562 4834849 R best DB hits: BLAST: gb:AAB91043.1; (AE001093) conserved hypothetical protein; E=0.84; hypothetical protein complement(4834562..4834849) Rhodopirellula baltica SH 1 1790606 NP_868684.1 CDS RB9058 NC_005027.1 4834725 4834922 R best DB hits: BLAST: embl:CAB88963.1; (AL353864) DNA-binding protein.; E=0.38; DNA-binding protein complement(4834725..4834922) Rhodopirellula baltica SH 1 1790104 NP_868685.1 CDS RB9063 NC_005027.1 4835065 4836423 D signal peptide 4835065..4836423 Rhodopirellula baltica SH 1 1791648 NP_868686.1 CDS RB9066 NC_005027.1 4836501 4839587 D best DB hits: BLAST: gb:AAG54838.1; AE005229_1 (AE005229) RTX family exoprotein; E=0.005 swissprot:Q99144; PEX5_YARLI PEROXISOMAL TARGETING SIGNAL RECEPTOR; E=0.056 pir:A72220; conserved hypothetical protein - Thermotoga maritima; E=0.084 COG: TM1695; COG0457 TPR-repeat-containing proteins; E=0.008 PFAM: PF00515; TPR Domain; E=0.28 PF01839; FG-GAP repeat; E=0.0027; RTX family protein exoprotein 4836501..4839587 Rhodopirellula baltica SH 1 1793300 NP_868687.1 CDS RB9067 NC_005027.1 4839661 4839834 D signal peptide 4839661..4839834 Rhodopirellula baltica SH 1 1793883 NP_868688.1 CDS RB9068 NC_005027.1 4839822 4840145 R signal peptide complement(4839822..4840145) Rhodopirellula baltica SH 1 1792524 NP_868689.1 CDS RB9070 NC_005027.1 4840267 4841496 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 4840267..4841496 Rhodopirellula baltica SH 1 1792085 NP_868690.1 CDS RB9072 NC_005027.1 4841493 4841639 R hypothetical protein complement(4841493..4841639) Rhodopirellula baltica SH 1 1794388 NP_868691.1 CDS RB9073 NC_005027.1 4841676 4844801 D best DB hits: PFAM: PF00515; TPR Domain; E=0.83; hypothetical protein 4841676..4844801 Rhodopirellula baltica SH 1 1797181 NP_868692.1 CDS RB9075 NC_005027.1 4844694 4844849 R hypothetical protein complement(4844694..4844849) Rhodopirellula baltica SH 1 1793223 NP_868693.1 CDS ybiT NC_005027.1 4844854 4846761 R best DB hits: BLAST: swissprot:P75790; YBIT_ECOLI HYPOTHETICAL ABC TRANSPORTER; E=1e-60 pir:D83399; probable ATP-binding component of ABC transporter PA1964; E=2e-60 swissprot:O05519; YDIF_BACSU HYPOTHETICAL ABC TRANSPORTER; E=2e-60 COG: ybiT; COG0488 ATPase components of ABC transporters with duplicated; E=1e-61 PA1964; COG0488 ATPase components of ABC transporters with; E=2e-61 yheS; COG0488 ATPase components of ABC transporters with duplicated; E=2e-52 PFAM: PF00005; ABC transporter; E=4.7e-40 PF00006; ATP synthase alpha/beta family; E=0.83 PF00005; ABC transporter; E=8.7e-34; ABC transporter ATP-binding protein complement(4844854..4846761) Rhodopirellula baltica SH 1 1794820 NP_868694.1 CDS sucA NC_005027.1 4846881 4849790 D SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 4846881..4849790 Rhodopirellula baltica SH 1 1790256 NP_868695.1 CDS RB9079 NC_005027.1 4849845 4850678 R hypothetical protein complement(4849845..4850678) Rhodopirellula baltica SH 1 1795011 NP_868696.1 CDS RB9080 NC_005027.1 4850732 4851769 R best DB hits: BLAST: pir:F83600; conserved hypothetical protein PA0368 [imported] -; E=6e-21 gb:AAG24650.1; (AF193866) unknown [Alcanivorax borkumensis]; E=8e-17 pir:F81794; conserved hypothetical protein NMA2211 [imported] -; E=1e-16 COG: PA0368; COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold; E=5e-22 NMB0276; COG0429 Predicted hydrolase of the alpha/beta-hydrolase; E=3e-17 VC2610; COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold; E=7e-15 PFAM: PF00561; alpha/beta hydrolase fold; E=0.0028; hydrolase complement(4850732..4851769) Rhodopirellula baltica SH 1 1794704 NP_868697.1 CDS RB9083 NC_005027.1 4851788 4852357 D best DB hits: BLAST: swissprot:O66967; Y768_AQUAE HYPOTHETICAL PROTEIN AQ_768 -----; E=1e-17 swissprot:O26683; Y583_METTH HYPOTHETICAL PROTEIN MTH583 -----; E=7e-17 swissprot:Q58963; YF68_METJA HYPOTHETICAL PROTEIN MJ1568 -----; E=1e-14 COG: aq_768; COG1514 2'-5' RNA ligase; E=1e-18 PFAM: PF02834; 2',5' RNA ligase; E=4.1e-11; 2'-5' RNA ligase 4851788..4852357 Rhodopirellula baltica SH 1 1795435 NP_868698.1 CDS RB9084 NC_005027.1 4852354 4853430 D PMID: 1885539 best DB hits: BLAST: ddbj:BAB04267.1; (AP001508) glycoprotein endopeptidase [Bacillus; E=3e-64 swissprot:O05518; GCP_BACSU PROBABLE O-SIALOGLYCOPROTEIN; E=4e-62 gb:AAK03322.1; (AE006163) Gcp [Pasteurella multocida]; E=1e-61 COG: BH0548; COG0533 Metal-dependent proteases with possible chaperone; E=3e-65 PFAM: PF00814; Glycoprotease; E=1.8e-113; glycoprotein endopeptidase 4852354..4853430 Rhodopirellula baltica SH 1 1790707 NP_868699.1 CDS RB9087 NC_005027.1 4853477 4854022 D PMID: 21595285; hypothetical protein 4853477..4854022 Rhodopirellula baltica SH 1 1796062 NP_868700.1 CDS pgl NC_005027.1 4854131 4854832 R PMID: 9020051 best DB hits: BLAST: swissprot:P46016; 6PGL_ANASP 6-PHOSPHOGLUCONOLACTONASE (6PGL); E=5e-36 pir:S76814; hypothetical protein - Synechocystis sp. (strain PCC; E=8e-31 swissprot:P74618; 6PGL_SYNY3 6-PHOSPHOGLUCONOLACTONASE (6PGL); E=8e-31 COG: sll1479; COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate; E=8e-32 PFAM: PF00256; Ribosomal protein L15; E=0.018; 6-phosphogluconolactonase complement(4854131..4854832) Rhodopirellula baltica SH 1 1790093 NP_868701.1 CDS panB NC_005027.1 4854896 4855705 R PMID: 10223988 best DB hits: BLAST: pir:T50554; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC; E=2e-47 swissprot:Q10505; PANB_MYCTU 3-METHYL-2-OXOBUTANOATE; E=1e-46 pir:T50565; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC; E=1e-45 COG: Rv2225; COG0413 Ketopantoate hydroxymethyltransferase; E=1e-47 PFAM: PF02548; Ketopantoate hydroxymethyltra; E=3.6e-110; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(4854896..4855705) Rhodopirellula baltica SH 1 1796458 NP_868702.1 CDS atsA NC_005027.1 4855732 4857735 R PMID: 8020961 PMID: 7744061 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=2e-35 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=5e-35 pir:S69336; arylsulfatase (EC 3.1.6.1) - Pseudomonas aeruginosa; E=6e-33 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=4e-33 PFAM: PF00884; Sulfatase; E=1.8e-50; N-acetylgalactosamine 6-sulfatase (GALNS) complement(4855732..4857735) Rhodopirellula baltica SH 1 1796287 NP_868703.1 CDS hasC NC_005027.1 4857876 4858808 D PMID: 7499387 best DB hits: BLAST: pir:A75096; UTP--glucose-1-phosphate uridylyltransferase (EC; E=3e-20 gb:AAD32398.1; AAD32398 (AF065404) pXO1-94 [Bacillus anthracis]; E=4e-19 swissprot:Q54713; HASC_STRPY UTP--GLUCOSE-1-PHOSPHATE; E=2e-17 COG: PAB0771; COG1210 UDP-glucose pyrophosphorylase; E=3e-21 PAB0784; COG1209 dTDP-glucose pyrophosphorylase; E=3e-04 PFAM: PF00483; Nucleotidyl transferase; E=0.014; UTP-glucose-1-phosphate uridylyltransferase 4857876..4858808 Rhodopirellula baltica SH 1 1796748 NP_868704.1 CDS RB9096 NC_005027.1 4858808 4862176 D PMID: 8666250 best DB hits: BLAST: swissprot:Q43772; UDPG_HORVU UTP--GLUCOSE-1-PHOSPHATE; E=3e-04 swissprot:P57751; UDPG_ARATH UTP--GLUCOSE-1-PHOSPHATE; E=0.001 swissprot:O64459; UDPG_PYRPY UTP--GLUCOSE-1-PHOSPHATE; E=0.001; UTP-glucose-1-phosphate uridylyltransferase 4858808..4862176 Rhodopirellula baltica SH 1 1796256 NP_868705.1 CDS RB9100 NC_005027.1 4862220 4863167 R hypothetical protein complement(4862220..4863167) Rhodopirellula baltica SH 1 1793896 NP_868706.1 CDS RB9101 NC_005027.1 4863130 4863681 R best DB hits: BLAST: pir:E82631; conserved hypothetical protein XF1840 [imported] -; E=4e-08 pir:F81836; probable periplasmic protein NMA1457 [imported] -; E=7e-08 pir:D81130; conserved hypothetical protein NMB1030 [imported] -; E=1e-07 COG: XF1840; COG2353 Uncharacterized BCR; E=4e-09; hypothetical protein complement(4863130..4863681) Rhodopirellula baltica SH 1 1796845 NP_868707.1 CDS clpB NC_005027.1 4863850 4866549 R PMID: 8759846 best DB hits: BLAST: swissprot:P74361; CLPB_SYNY3 CLPB PROTEIN ----- pir: S76197; E=0.0 gb:AAK03788.1; (AE006206) ClpB [Pasteurella multocida]; E=0.0 swissprot:P53533; CLPB_SYNP7 CLPB PROTEIN ----- gb: AAB09631.1; E=0.0 COG: slr1641; COG0542 ATPases with chaperone activity, ATP-binding domain; E=0.0 PFAM: PF02861; Clp amino terminal domain; E=1.1e-07 PF02421; Ferrous iron transport protein; E=0.54 PF00004; ATPase associated with v; E=6e-14; ClpB protein complement(4863850..4866549) Rhodopirellula baltica SH 1 1791231 NP_868708.1 CDS RB9104 NC_005027.1 4866559 4866696 R hypothetical protein complement(4866559..4866696) Rhodopirellula baltica SH 1 1796442 NP_868709.1 CDS dnaK NC_005027.1 4866720 4868834 R PMID: 9061015 best DB hits: BLAST: ddbj:BAA19796.1; (D78133) DnaK protein [Rhodopseudomonas sp.]; E=0.0 gb:AAK00145.1; AF222752_1 (AF222752) heat shock protein; E=0.0 swissprot:P28608; DNAK_BORBU DNAK PROTEIN (HEAT SHOCK PROTEIN 70); E=0.0 COG: BB0518; COG0443 Molecular chaperone; E=0.0 PFAM: PF00012; Hsp70 protein; E=0; molecular chaperone DnaK complement(4866720..4868834) Rhodopirellula baltica SH 1 1797178 NP_868710.1 CDS pheA NC_005027.1 4868997 4870088 D PMID: 1919506 best DB hits: BLAST: swissprot:O67085; PHEA_AQUAE P-PROTEIN [INCLUDES: CHORISMATE; E=2e-40 swissprot:P27603; PHEA_PSEST P-PROTEIN [INCLUDES: CHORISMATE; E=8e-40 gb:AAD47360.1; AF038578_3 (AF038578) chorismate mutaseprephenate; E=1e-38 COG: aq_951_2; COG0077 Prephenate dehydratase; E=9e-40 PFAM: PF00800; Prephenate dehydratase; E=4.5e-50 PF01842; ACT domain; E=3.1e-09; P-protein (PheA) 4868997..4870088 Rhodopirellula baltica SH 1 1793458 NP_868711.1 CDS moxR NC_005027.1 4870326 4871405 R PMID: 8997703 best DB hits: BLAST: pir:H82493; MoxR-related protein VCA0175 [imported] - Vibrio; E=4e-67 pir:C75037; methanol dehydrogenase regulatory protein (moxr-3); E=3e-65 pir:G71146; hypothetical protein PH0385 - Pyrococcus horikoshii; E=6e-65 COG: VCA0175; COG0714 MoxR-like ATPases; E=4e-68 PFAM: PF00004; ATPase associated with; E=0.00052 PF01078; Magnesium chelatase, subunit; E=0.00014; MoxR-related protein complement(4870326..4871405) Rhodopirellula baltica SH 1 1795795 NP_868712.1 CDS gyrB NC_005027.1 4871365 4874058 R PMID: 2170947 PMID: 2540413 best DB hits: BLAST: swissprot:O84193; GYRB_CHLTR DNA GYRASE SUBUNIT B ----- pir:; E=1e-154 gb:AAC33551.1; (AF044267) gyrase subunit B [Chlamydia; E=1e-153 swissprot:P13364; GYRB_PSEPU DNA GYRASE SUBUNIT B ----- pir:; E=1e-141 COG: CT190; COG0187 DNA gyrase (topoisomerase II) B subunit; E=1e-155 PFAM: PF02518; Histidine kinase-, DNA gyrase B; E=2.2e-17 PF00204; DNA topoisomerase II (N-termina; E=6.5e-78 PF00750; tRNA synthetases class I (R); E=0.49; DNA gyrase subunit B complement(4871365..4874058) Rhodopirellula baltica SH 1 1795730 NP_868713.1 CDS RB9110 NC_005027.1 4874173 4875924 R best DB hits: BLAST: pir:H69064; serinethreonine protein kinase related protein -; E=0.037 embl:CAB57415.1; (AL121746) hypothetical protein SCF73.10c; E=0.075 COG: MTH1485; COG1520 Uncharacterized proteins of WD40-like repeat family; E=0.003 PFAM: PF01011; PQQ enzyme repeat; E=0.25; serine/threonine protein kinase related protein complement(4874173..4875924) Rhodopirellula baltica SH 1 1791475 NP_868714.1 CDS RB9112 NC_005027.1 4875751 4876041 D best DB hits: BLAST: pir:E83275; thymidylate kinase PA2962 [imported] - Pseudomonas; E=0.27; thymidylate kinase 4875751..4876041 Rhodopirellula baltica SH 1 1791950 NP_868715.1 CDS pfpI NC_005027.1 4876026 4876598 D best DB hits: BLAST: pir:A83103; conserved hypothetical protein PA4336 [imported] -; E=3e-62 gb:AAF26988.1; AC018363_33 (AC018363) unknown protein [Arabidopsis; E=2e-55 gb:AAD56430.1; AF158699_2 (AF158699) unknown [Burkholderia; E=1e-51 COG: PA4336; COG0693 intracellular protease/amidase; E=3e-63 PAB1200; COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase,; E=5e-04 Cj0899c; COG0693 intracellular protease/amidase; E=5e-04 PFAM: PF01965; ThiJ/PfpI family; E=2.5e-45; intracellular proteinase 4876026..4876598 Rhodopirellula baltica SH 1 1793787 NP_868716.1 CDS RB9114 NC_005027.1 4876598 4878172 D hypothetical protein 4876598..4878172 Rhodopirellula baltica SH 1 1796895 NP_868717.1 CDS RB9115 NC_005027.1 4878182 4878685 D best DB hits: BLAST: pir:A82306; conserved hypothetical protein VC0580 [imported] -; E=1e-05 swissprot:Q10819; YS98_MYCTU HYPOTHETICAL 14.2 KDA PROTEIN RV2898C; E=8e-04 pir:H83091; conserved hypothetical protein PA4424 [imported] -; E=0.001 COG: VC0580; COG0792 Predicted endonuclease distantly related to archaeal; E=1e-06 Rv2898c; COG0792 Predicted endonuclease distantly related to; E=8e-05 PA4424; COG0792 Predicted endonuclease distantly related to archaeal; E=1e-04 PFAM: PF02021; Uncharacterised protein family; E=1.4e-18; endonuclease 4878182..4878685 Rhodopirellula baltica SH 1 1793579 NP_868718.1 CDS argE NC_005027.1 4878718 4879983 R PMID: 99047594 best DB hits: BLAST: pir:B82973; probable peptidic bond hydrolase PA5390 [imported] -; E=2e-32 gb:AAC82366.1; (AF055904) acetylornithine deacetylase; ArgE; E=3e-31 gb:AAK03201.1; (AE006153) ArgE [Pasteurella multocida]; E=8e-27 COG: PA5390; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate; E=2e-33 BS_argE; COG0624 Acetylornithine; E=8e-12 AF0904; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate; E=1e-10 PFAM: PF01546; Peptidase M20/M25/M40; E=0.12; acetylornithine deacetylase ArgE complement(4878718..4879983) Rhodopirellula baltica SH 1 1793892 NP_868719.1 CDS ykoK NC_005027.1 4879893 4881428 D best DB hits: BLAST: ddbj:BAA75383.1; (AB013374) Ykok [Bacillus halodurans]; E=5e-38 ddbj:BAB04230.1; (AP001508) magnesium (Mg2+) transporter; E=5e-38 pir:B81018; magnesium transporter NMB1999 [imported] - Neisseria; E=2e-37 COG: BH0511; COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain); E=5e-39 PFAM: PF00571; CBS domain; E=0.081 PF01769; Divalent cation transporter; E=7.3e-28; magnesium transporter Ykok 4879893..4881428 Rhodopirellula baltica SH 1 1796838 NP_868720.1 CDS RB9120 NC_005027.1 4881482 4885273 R best DB hits: BLAST: pir:T36406; hypothetical protein SCF34.07 - Streptomyces coelicolor; E=1e-06 pir:F75417; L-sorbosone dehydrogenase - Deinococcus radiodurans; E=7e-04 pir:C75617; probable oxidoreductase - Deinococcus radiodurans; E=0.022 COG: DR1257; COG2133 Glucose/sorbosone dehydrogenases; E=7e-05 PFAM: PF02837; Glycosyl hydrolases family 2,; E=0.00037 PF00034; Cytochrome c; E=0.0092; hypothetical protein complement(4881482..4885273) Rhodopirellula baltica SH 1 1792503 NP_868721.1 CDS RB9126 NC_005027.1 4885253 4885417 D hypothetical protein 4885253..4885417 Rhodopirellula baltica SH 1 1795332 NP_868722.1 CDS RB9128 NC_005027.1 4885396 4886001 R hypothetical protein complement(4885396..4886001) Rhodopirellula baltica SH 1 1792848 NP_868723.1 CDS RB9130 NC_005027.1 4886018 4886818 R hypothetical protein complement(4886018..4886818) Rhodopirellula baltica SH 1 1790815 NP_868724.1 CDS RB9132 NC_005027.1 4886727 4888004 D best DB hits: BLAST: swissprot:P55480; Y4HM_RHISN HYPOTHETICAL PROTEIN Y4HM PRECURSOR; E=7e-52 pir:D69803; hypothetical protein yfiI - Bacillus subtilis -----; E=7e-49 pir:T34927; probable oxidoreductase - Streptomyces coelicolor; E=1e-21 COG: BS_yfiI; COG0673 Predicted dehydrogenases and related proteins; E=7e-50 PFAM: PF01408; Oxidoreductase, NAD-bin; E=6.1e-30 PF02894; Oxidoreductase, C-termi; E=2.5e-09; hypothetical protein 4886727..4888004 Rhodopirellula baltica SH 1 1793756 NP_868725.1 CDS ispD NC_005027.1 4888021 4888752 D PMID: 10518523 PMID: 11427897 best DB hits: BLAST: swissprot:Q06755; ISPD_BACSU; E=2e-32 pir:S66119; conserved hypothetical protein yacM - Bacillus subtilis; E=7e-32 swissprot:Q9KGF8; ISPD_BACHD; E=4e-28 COG: BS_yacM; COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; E=7e-33 PFAM: PF01128; Uncharacterized protein family UPF00; E=4.2e-63; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 4888021..4888752 Rhodopirellula baltica SH 1 1794108 NP_868726.1 CDS tyrS NC_005027.1 4888731 4890047 D PMID: 3011073 best DB hits: BLAST: swissprot:P04077; SYY_BACCA TYROSYL-TRNA SYNTHETASE; E=1e-104 swissprot:P00952; SYY_BACST TYROSYL-TRNA SYNTHETASE; E=1e-104 swissprot:P22326; SYY1_BACSU TYROSYL-TRNA SYNTHETASE 1; E=1e-98 COG: BS_tyrS; COG0162 Tyrosyl-tRNA synthetase; E=1e-99 PFAM: PF00579; tRNA synthetases class I (W and; E=2.3e-107; tyrosyl-tRNA synthetase 4888731..4890047 Rhodopirellula baltica SH 1 1797176 NP_868727.1 CDS xlnC NC_005027.1 4890050 4891843 D PMID: 8917072 best DB hits: BLAST: pir:T05214; hypothetical protein F17I5.50 - Arabidopsis thaliana; E=1e-14 pir:T00624; endo-1,4-beta-xylanase homolog T27I1.7 - Arabidopsis; E=6e-14 ddbj:BAA88262.1; (AB008015) similar to xylan endohydrolase; E=1e-12; endo-1,4-beta-xylanase 4890050..4891843 Rhodopirellula baltica SH 1 1792422 NP_868728.1 CDS rsmC NC_005027.1 4891836 4892876 D PMID: 9873033 best DB hits: BLAST: pir:E72640; hypothetical protein APE0557 - Aeropyrum pernix (strain; E=7e-07 embl:CAC22834.1; (AL512963) hypothetical [Sulfolobus; E=5e-06 swissprot:P37872; YBXB_BACSU HYPOTHETICAL 22.5 KDA PROTEIN IN; E=9e-06 COG: APE0557; COG0116 Predicted N6-adenine-specific DNA methylases; E=7e-08 BS_ybxB; COG2813 16S RNA G1207 methylase RsmC; E=9e-07 MTH1918; COG2263 Predicted RNA methylase; E=0.004; ribosomal RNA small subunit methyltransferase C 4891836..4892876 Rhodopirellula baltica SH 1 1790773 NP_868729.1 CDS titin NC_005027.1 4892884 4893279 D best DB hits: BLAST: embl:CAA62188.1; (X90568) Protein sequence and annotation; E=0.25 pir:I38344; titin, cardiac muscle [validated] - human; E=0.25; titin 4892884..4893279 Rhodopirellula baltica SH 1 1791505 NP_868730.1 CDS RB9143 NC_005027.1 4893247 4893513 R hypothetical protein complement(4893247..4893513) Rhodopirellula baltica SH 1 1790196 NP_868731.1 CDS RB9144 NC_005027.1 4893346 4893798 D hypothetical protein 4893346..4893798 Rhodopirellula baltica SH 1 1790952 NP_868732.1 CDS RB9146 NC_005027.1 4893681 4895339 R best DB hits: BLAST: pir:A72314; hypothetical protein TM0950 - Thermotoga maritima; E=0.001; hypothetical protein complement(4893681..4895339) Rhodopirellula baltica SH 1 1792423 NP_868733.1 CDS RB9149 NC_005027.1 4895461 4895574 R hypothetical protein complement(4895461..4895574) Rhodopirellula baltica SH 1 1790457 NP_868734.1 CDS RB9151 NC_005027.1 4895546 4895821 D hypothetical protein 4895546..4895821 Rhodopirellula baltica SH 1 1791886 NP_868735.1 CDS RB9155 NC_005027.1 4895920 4896042 R hypothetical protein complement(4895920..4896042) Rhodopirellula baltica SH 1 1795069 NP_868736.1 CDS RB9156 NC_005027.1 4896072 4899233 D best DB hits: BLAST: pir:B70374; conserved hypothetical protein aq_854 - Aquifex aeolicus; E=2e-04 pir:H71261; conserved hypothetical protein TP0954 - syphilis; E=0.21 gb:AAF26789.1; AC016829_13 (AC016829) O-linked GlcNAc; E=0.44 COG: aq_854; COG0457 TPR-repeat-containing proteins; E=2e-05 PFAM: PF00515; TPR Domain; E=0.14; hypothetical protein 4896072..4899233 Rhodopirellula baltica SH 1 1791281 NP_868737.1 CDS RB9157 NC_005027.1 4899277 4899549 R signal peptide complement(4899277..4899549) Rhodopirellula baltica SH 1 1797175 NP_868738.1 CDS RB9159 NC_005027.1 4899546 4900523 R hypothetical protein complement(4899546..4900523) Rhodopirellula baltica SH 1 1795945 NP_868739.1 CDS RB9160 NC_005027.1 4900491 4900847 D hypothetical protein 4900491..4900847 Rhodopirellula baltica SH 1 1796082 NP_868740.1 CDS RB9161 NC_005027.1 4900858 4901631 R metallopeptidase complement(4900858..4901631) Rhodopirellula baltica SH 1 1791876 NP_868741.1 CDS RB9164 NC_005027.1 4901660 4903453 R best DB hits: BLAST: pir:G70687; hypothetical protein Rv1732c - Mycobacterium; E=5e-13 pir:S75290; hypothetical protein sll1289 - Synechocystis sp. (strain; E=6e-11 gb:AAG19194.1; (AE005016) Vng0711c [Halobacterium sp. NRC-1]; E=1e-10 COG: Rv1732c; COG0526 Thiol-disulfide isomerase and thioredoxins; E=5e-14 DR2242; COG0450 Thiol - alkyl hydroperoxide reductases; E=4e-06 BS_yneN; COG0526 Thiol-disulfide isomerase and thioredoxins; E=5e-06 PFAM: PF00578; AhpC/TSA family; E=0.00037 PF00255; Glutathione peroxidase; E=0.77; thiol-disulfide isomerase complement(4901660..4903453) Rhodopirellula baltica SH 1 1791171 NP_868742.1 CDS RB9167 NC_005027.1 4903417 4903614 R hypothetical protein complement(4903417..4903614) Rhodopirellula baltica SH 1 1796384 NP_868743.1 CDS RB9168 NC_005027.1 4903635 4904627 R PMID: 10531250 best DB hits: BLAST: pir:G70415; nucleotide sugar epimerase - Aquifex aeolicus -----; E=5e-90 ddbj:BAB07428.1; (AP001519) nucleotide sugar epimerase; E=6e-57 gb:AAD50494.1; AF172324_12 (AF172324) WbnF [Escherichia coli]; E=2e-55 COG: aq_1335; COG0451 Nucleoside-diphosphate-sugar epimerases; E=5e-91 XF0255; COG1088 dTDP-D-glucose 4,6-dehydratase; E=1e-23 PA1384; COG1087 UDP-glucose 4-epimerase; E=1e-23 PFAM: PF00106; short chain dehydrogenase; E=0.16 PF01370; NAD dependent epimerase/dehydratase; E=8.9e-98; nucleotide sugar epimerase complement(4903635..4904627) Rhodopirellula baltica SH 1 1796626 NP_868744.1 CDS wecB NC_005027.1 4904739 4905881 D PMID: 8226648 best DB hits: BLAST: pir:A82264; UDP-N-acetylglucosamine 2-epimerase VC0917 [imported] -; E=1e-106 pir:T44828; probable UDP-N-acetylglucosamine 2-epimerase (EC; E=1e-101 swissprot:P27828; WECB_ECOLI UDP-N-ACETYLGLUCOSAMINE 2-EPIMERASE; E=1e-101 COG: VC0917; COG0381 UDP-N-acetylglucosamine 2-epimerase; E=1e-107 PFAM: PF02350; UDP-N-acetylglucosamine 2-epimera; E=1.7e-162; UDP-N-acetylglucosamine 2-epimerase 4904739..4905881 Rhodopirellula baltica SH 1 1793574 NP_868745.1 CDS RB9170 NC_005027.1 4905872 4907278 R signal peptide complement(4905872..4907278) Rhodopirellula baltica SH 1 1794451 NP_868746.1 CDS RB9174 NC_005027.1 4907485 4908450 R best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein complement(4907485..4908450) Rhodopirellula baltica SH 1 1789987 NP_868747.1 CDS RB9176 NC_005027.1 4908466 4908651 D hypothetical protein 4908466..4908651 Rhodopirellula baltica SH 1 1792159 NP_868748.1 CDS RB9180 NC_005027.1 4908835 4910352 D signal peptide 4908835..4910352 Rhodopirellula baltica SH 1 1790635 NP_868749.1 CDS exoF NC_005027.1 4910352 4912637 D PMID: 8439670 best DB hits: BLAST: pir:F70345; polysaccharide biosynthesis protein - Aquifex aeolicus; E=2e-07 pir:S70958; otnA protein - Vibrio cholerae ----- embl:; E=1e-06 swissprot:Q02728; EXOF_RHIME EXOPOLYSACCHARIDE PRODUCTION PROTEIN; E=3e-05 COG: aq_505; COG1596 Periplasmic protein involved in polysaccharide; E=2e-08 yccZ; COG1596 Periplasmic protein involved in polysaccharide export; E=1e-05 PA2234; COG1596 Periplasmic protein involved in polysaccharide; E=0.001 PFAM: PF00159; Pancreatic hormone peptide; E=0.82; polysaccharide biosynthesis protein 4910352..4912637 Rhodopirellula baltica SH 1 1796162 NP_868750.1 CDS lysA NC_005027.1 4912719 4914002 D PMID: 6350601 best DB hits: BLAST: gb:AAK05382.1; AE006360_11 (AE006360) diaminopimelate; E=1e-106 swissprot:P31851; TABA_PSESZ TABA PROTEIN ----- pir: S27649; E=6e-92 swissprot:O27390; DCDA_METTH DIAMINOPIMELATE DECARBOXYLASE (DAP; E=7e-59 COG: MTH1335; COG0019 Diaminopimelate decarboxylase; E=7e-60 PFAM: PF02784; Pyridoxal-dependent decarboxy; E=3.1e-40 PF00278; Pyridoxal-dependent decarboxy; E=1.4e-29; diaminopimelate decarboxylase 4912719..4914002 Rhodopirellula baltica SH 1 1796712 NP_868751.1 CDS RB9190 NC_005027.1 4914039 4914437 D best DB hits: BLAST: pir:E75319; ferredoxin - Deinococcus radiodurans (strain R1) -----; E=2e-18 pir:C83272; Na+-translocating NADH:quinone oxidoreductase, subunit; E=0.002 gb:AAD03987.1; (AF079317) xylene monooxygenase electron transfer; E=0.005 COG: DR2075; COG0633 Ferredoxin; E=2e-19 PA2994; COG2871 Na+-transporting NADH:ubiquinone oxidoreductase beta; E=2e-04 CPn0883; COG2871 Na+-transporting NADH:ubiquinone oxidoreductase; E=0.001 PFAM: PF00111; 2Fe-2S iron-sulfur cluster binding d; E=2.6e-05; ferredoxin 4914039..4914437 Rhodopirellula baltica SH 1 1790544 NP_868752.1 CDS RB9191 NC_005027.1 4914516 4914653 D hypothetical protein 4914516..4914653 Rhodopirellula baltica SH 1 1791671 NP_868753.1 CDS arsA NC_005027.1 4914631 4916001 R PMID: 7910580 PMID: 1572648 best DB hits: BLAST: embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=2e-27 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=2e-27 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=7e-27 COG: aslA; COG3119 Arylsulfatase A and related enzymes; E=9e-22 PFAM: PF00884; Sulfatase; E=1.5e-55; arylsulphatase A complement(4914631..4916001) Rhodopirellula baltica SH 1 1791531 NP_868754.1 CDS RB9195 NC_005027.1 4916023 4916592 R hypothetical protein complement(4916023..4916592) Rhodopirellula baltica SH 1 1795388 NP_868755.1 CDS RB9196 NC_005027.1 4916635 4917975 D best DB hits: BLAST: pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=1e-05 embl:CAB94634.1; (AL359215) secreted glycosyl hydrolase.; E=1e-04; secreted glycosyl hydrolase 4916635..4917975 Rhodopirellula baltica SH 1 1797207 NP_868756.1 CDS RB9197 NC_005027.1 4918018 4918140 D hypothetical protein 4918018..4918140 Rhodopirellula baltica SH 1 1791632 NP_868757.1 CDS RB9198 NC_005027.1 4918032 4918208 D hypothetical protein 4918032..4918208 Rhodopirellula baltica SH 1 1792390 NP_868758.1 CDS RB9199 NC_005027.1 4918120 4918323 R hypothetical protein complement(4918120..4918323) Rhodopirellula baltica SH 1 1794936 NP_868759.1 CDS nagD NC_005027.1 4918369 4919220 R PMID: 97000351 PMID: 99411980 PMID: 2668691 PMID: 2190615 best DB hits: BLAST: embl:CAB65573.1; (AL136058) probable; E=1e-51 ddbj:BAB07147.1; (AP001518) p-nitrophenyl phosphatase [Bacillus; E=4e-43 swissprot:P15302; NAGD_ECOLI NAGD PROTEIN ----- pir: B64802; E=6e-42 COG: BH3428; COG0647 Predicted sugar phosphatases of the HAD superfamily; E=4e-44 VNG0719G; COG0647 Predicted sugar phosphatases of the HAD; E=7e-31 BH1074; COG0647 Predicted sugar phosphatases of the HAD superfamily; E=2e-24 PFAM: PF00702; haloacid dehalogenase-like hydr; E=2.9e-14; N-acetylglucosamine-6-phoshatase or p-nitrophenyl phosphatase complement(4918369..4919220) Rhodopirellula baltica SH 1 1791522 NP_868760.1 CDS RB9201 NC_005027.1 4919456 4925596 R best DB hits: BLAST: pir:E72310; hypothetical protein - Thermotoga maritima (strain MSB8); E=8e-06 pir:F83085; conserved hypothetical protein PA4489 [imported] -; E=9e-06 ddbj:BAA12317.1; (D84339) murinoglobulin [Cavia porcellus]; E=9e-05 COG: TM0984; COG2373 Large extracellular alpha-helical protein; E=8e-07; hypothetical protein complement(4919456..4925596) Rhodopirellula baltica SH 1 1792720 NP_868761.1 CDS RB9208 NC_005027.1 4925661 4926506 D PMID: 9163424 best DB hits: BLAST: swissprot:P55478; Y4HK_RHISN HYPOTHETICAL 25.4 KD PROTEIN Y4HK; E=8e-07 gb:AAG60981.1; AF322013_100 (AF322013) ID687 [Bradyrhizobium; E=2e-04 PFAM: PF02056; Family 4 glycosyl hydrolase; E=0.31 PF01925; Domain of unknown function DUF8; E=0.00091; hypothetical protein 4925661..4926506 Rhodopirellula baltica SH 1 1795813 NP_868762.1 CDS nifS NC_005027.1 4926525 4927712 R PMID: 8663056 PMID: 10600118 PMID: iscS best DB hits: BLAST: pir:E81852; NifS-like aminotranfserase NMA1594 [imported] -; E=1e-63 gb:AAF62329.1; (AE002486) nifS protein [Neisseria meningitidis; E=9e-63 pir:A71652; iron-sulfur cofactor synthesis protein RP486 -; E=1e-60 COG: NMB1379; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; E=8e-64 PFAM: PF00266; Aminotransferase class-V; E=3.4e-70; NifS-like aminotranfserase- cysteine desulfurase complement(4926525..4927712) Rhodopirellula baltica SH 1 1793265 NP_868763.1 CDS dnl1 NC_005027.1 4927739 4928980 R PMID: 9469931 best DB hits: BLAST: swissprot:P00639; DRN1_BOVIN DEOXYRIBONUCLEASE I PRECURSOR (DNASE; E=6e-11 pdb:3DNI; Deoxyribonuclease I (Dnase I) (E.C.3.1.21.1) -----; E=6e-11 pdb:1ATN; D Chain D, Deoxyribonuclease I Complex With Actin; E=9e-11 PFAM: PF01181; Deoxyribonuclease I (DNase I); E=0.053; deoxyribonuclease I precursor (DNase I) complement(4927739..4928980) Rhodopirellula baltica SH 1 1794843 NP_868764.1 CDS sucB NC_005027.1 4929311 4930618 D PMID: 9823893 best DB hits: BLAST: swissprot:Q9ZDY4; ODO2_RICPR DIHYDROLIPOAMIDE SUCCINYLTRANSFERASE; E=4e-93 pir:S42875; dihydrolipoamide S-succinyltransferase (EC 2.3.1.61) -; E=7e-92 swissprot:P52993; ODO2_ALCEU DIHYDROLIPOAMIDE SUCCINYLTRANSFERASE; E=7e-92 COG: RP179; COG0508 Dihydrolipoamide acyltransferases; E=4e-94 PFAM: PF00364; Biotin-requiring enzyme; E=5e-17 PF02817; e3 binding domain; E=1.8e-14 PF00198; 2-oxo acid dehydrogenases acylt; E=2.2e-96; dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex 4929311..4930618 Rhodopirellula baltica SH 1 1791478 NP_868765.1 CDS ank2 NC_005027.1 4930706 4931395 R PMID: 1830053 best DB hits: BLAST: ddbj:BAA86537.1; (AB033049) KIAA1223 protein [Homo sapiens]; E=5e-12 gb:AAF56803.1; (AE003766) CG10011 gene product [Drosophila; E=5e-12 pir:T25412; hypothetical protein T28D6.4 - Caenorhabditis elegans; E=1e-11 COG: XF1640; COG0666 Ankyrin repeat proteins; E=2e-07 PFAM: PF00023; Ank repeat; E=0.00059; ankyrin repeat-containing protein complement(4930706..4931395) Rhodopirellula baltica SH 1 1790227 NP_868766.1 CDS RB9218 NC_005027.1 4931428 4932162 R best DB hits: BLAST: pir:F70418; conserved hypothetical protein aq_1365 - Aquifex; E=9e-24 embl:CAB94036.1; (AL358652) conserved hypothetical protein; E=6e-21 gb:AAB90387.1; (AE001045) conserved hypothetical protein; E=6e-19 COG: aq_1365_1; COG0062 Uncharacterized ACR; E=5e-22; hypothetical protein complement(4931428..4932162) Rhodopirellula baltica SH 1 1795178 NP_868767.1 CDS RB9220 NC_005027.1 4932047 4932877 R hypothetical protein complement(4932047..4932877) Rhodopirellula baltica SH 1 1792916 NP_868768.1 CDS mucD NC_005027.1 4932617 4934044 D PMID: 11761711 PMID: 8606151 best DB hits: BLAST: gb:AAK01318.1; (AF190580) MucD [Pseudomonas syringae pv.; E=0.010 gb:AAB01513.1; (U30799) MucD [Azotobacter vinelandii]; E=0.087 pir:F83550; serine proteinase MucD precursor PA0766 [imported] -; E=0.50 PFAM: PF00595; PDZ domain (Also known as DHR or; E=7.1e-05; MucD- a secreted serine proteinase 4932617..4934044 Rhodopirellula baltica SH 1 1795290 NP_868769.1 CDS RB9226 NC_005027.1 4934175 4934600 R hypothetical protein complement(4934175..4934600) Rhodopirellula baltica SH 1 1790765 NP_868770.1 CDS RB9227 NC_005027.1 4934332 4934649 R PMID: 9990318 best DB hits: BLAST: swissprot:P39405; FHUF_ECOLI FERRIC IRON REDUCTase FHUF; E=0.82 gb:AAG59550.1; AE005668_5 (AE005668) orf, hypothetical protein; E=0.85; ferric iron reductase fhuF complement(4934332..4934649) Rhodopirellula baltica SH 1 1796447 NP_868771.1 CDS RB9228 NC_005027.1 4934679 4936592 D hypothetical protein 4934679..4936592 Rhodopirellula baltica SH 1 1794274 NP_868772.1 CDS RB9230 NC_005027.1 4936673 4936996 D hypothetical protein 4936673..4936996 Rhodopirellula baltica SH 1 1795788 NP_868773.1 CDS RB9231 NC_005027.1 4936679 4937008 R hypothetical protein complement(4936679..4937008) Rhodopirellula baltica SH 1 1795952 NP_868774.1 CDS RB9232 NC_005027.1 4937011 4937940 D best DB hits: BLAST: embl:CAB93418.1; (AL357524) transposase [Streptomyces; E=0.60; transposase 4937011..4937940 Rhodopirellula baltica SH 1 1796453 NP_868775.1 CDS RB9233 NC_005027.1 4938001 4938246 D signal peptide 4938001..4938246 Rhodopirellula baltica SH 1 1791584 NP_868776.1 CDS noeI NC_005027.1 4938435 4939232 D PMID: 9163424 best DB hits: BLAST: swissprot:P55473; NOEI_RHISN NODULATION PROTEIN NOEI ----- gb:; E=0.004 gb:AAF67136.1; AF228683_3 (AF228683) nodulation protein NoeI; E=0.006 pir:S73065; u0002kb protein - Mycobacterium tuberculosis -----; E=0.014 COG: sll1456; COG0500 SAM-dependent methyltransferases; E=0.003; nodulation protein noeI- methyltransferase 4938435..4939232 Rhodopirellula baltica SH 1 1791530 NP_868777.1 CDS RB9236 NC_005027.1 4939229 4939393 D hypothetical protein 4939229..4939393 Rhodopirellula baltica SH 1 1795160 NP_868778.1 CDS RB9237 NC_005027.1 4939360 4940193 D PMID: 20127862 PMID: 10350455 best DB hits: BLAST: pir:B81318; probable two-domain glycosyltransferase Cj1135; E=1e-20 gb:AAF34140.1; (AF167344) glycosyltransferase [Campylobacter; E=2e-13 gb:AAG43975.1; AF215659_3 (AF215659) glycosyltransferase; E=2e-13 COG: Cj1135; COG0463 Glycosyltransferases involved in cell wall; E=1e-21 aq_1407; COG1215 Glycosyltransferases, probably involved in cell; E=0.010 PFAM: PF00535; Glycosyl transferase; E=2.8e-19; glycosyltransferase 4939360..4940193 Rhodopirellula baltica SH 1 1796545 NP_868779.1 CDS fucT2 NC_005027.1 4940193 4941143 D PMID: 10377135 PMID: 99195826 PMID: 7721792 best DB hits: BLAST: pir:T44328; hypothetical protein wblA [imported] - Vibrio cholerae; E=7e-32 gb:AAD40713.1; AF048749_9 (AF048749) fucosyl transferase; E=1e-18 gb:AAD29863.1; (AF093828) alpha-1,2-fucosyltransferase; E=2e-18 PFAM: PF01531; Glycosyl transferase 1; E=2.2e-16; fucosyl transferase 4940193..4941143 Rhodopirellula baltica SH 1 1790375 NP_868780.1 CDS RB9239 NC_005027.1 4941209 4941904 D best DB hits: BLAST: pir:D70714; hypothetical protein Rv1513 - Mycobacterium tuberculosis; E=2e-04 pir:S73065; u0002kb protein - Mycobacterium tuberculosis -----; E=0.021 embl:CAA11577.1; (AJ223833) gsc [Mycobacterium avium subsp.; E=0.080; hypothetical protein 4941209..4941904 Rhodopirellula baltica SH 1 1790433 NP_868781.1 CDS RB9241 NC_005027.1 4941959 4942762 D best DB hits: BLAST: pir:E83602; hypothetical protein PA0343 [imported] - Pseudomonas; E=4e-07 pir:C82785; hypothetical protein XF0607 [imported] - Xylella; E=0.17 gb:AAF86398.1; AF235504_19 (AF235504) FkbM [Streptomyces; E=0.73; hypothetical protein 4941959..4942762 Rhodopirellula baltica SH 1 1791016 NP_868782.1 CDS RB9243 NC_005027.1 4942873 4943853 R best DB hits: PFAM: PF01668; SmpB protein; E=0.84 PF00535; Glycosyl transferase; E=0.029; glycosyltransferase complement(4942873..4943853) Rhodopirellula baltica SH 1 1792991 NP_868783.1 CDS waaQ NC_005027.1 4944047 4945117 R PMID: 11371519 PMID: 97315213 best DB hits: BLAST: gb:AAD37767.1; AF146532_7 (AF146532) heptosyl III; E=9e-13 gb:AAK03386.1; (AE006169) OpsX [Pasteurella multocida]; E=3e-07 embl:CAA07672.1; (AJ007747) heptosyltransferase; E=5e-07 COG: HI0261; COG0859 ADP-heptose:LPS heptosyltransferase; E=3e-07 PFAM: PF01075; Glycosyltransferase 9 (; E=6.9e-06; heptosyl III transferase complement(4944047..4945117) Rhodopirellula baltica SH 1 1791609 NP_868784.1 CDS RB9249 NC_005027.1 4945139 4947571 R hypothetical protein complement(4945139..4947571) Rhodopirellula baltica SH 1 1792091 NP_868785.1 CDS gidA NC_005027.1 4947533 4949536 D GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 4947533..4949536 Rhodopirellula baltica SH 1 1792294 NP_868786.1 CDS RB9256 NC_005027.1 4949533 4950621 D best DB hits: BLAST: pir:C83451; conserved hypothetical protein PA1563 [imported] -; E=0.089 pir:A82768; conserved hypothetical protein XF0748 [imported] -; E=0.11 COG: PA1563; COG2933 Predicted SAM-dependent methyltransferase; E=0.008; SAM-depedent methyltransferase 4949533..4950621 Rhodopirellula baltica SH 1 1795073 NP_868787.1 CDS RB9260 NC_005027.1 4951242 4952522 D PMID: 9884231 best DB hits: BLAST: embl:CAA06650.1; (AJ005645) sdrc [Staphylococcus aureus]; E=0.21; SD repeat-containing protein 4951242..4952522 Rhodopirellula baltica SH 1 1796288 NP_868788.1 CDS RB9261 NC_005027.1 4952589 4953827 D best DB hits: BLAST: ddbj:BAA37082.1; (AB022095) ORF2 [Streptomyces griseus]; E=5e-45 embl:CAC04221.1; (AL391515) conserved hypothetical protein; E=9e-35 pir:G69070; coenzyme F390 synthetase I - Methanobacterium; E=0.004 COG: MTH1528; COG1541 Coenzyme F390 synthetase; E=4e-04 PFAM: PF00031; Cystatin domain; E=0.0015; hypothetical protein 4952589..4953827 Rhodopirellula baltica SH 1 1790092 NP_868789.1 CDS RB9262 NC_005027.1 4953841 4955331 D best DB hits: BLAST: embl:CAC04220.1; (AL391515) conserved hypothetical protein; E=1e-21 ddbj:BAA37083.1; (AB022095) ORF3 [Streptomyces griseus]; E=8e-13 pir:E70961; hypothetical protein Rv0223c - Mycobacterium; E=4e-06 COG: Rv0223c; COG1012 NAD-dependent aldehyde dehydrogenases; E=3e-07 PFAM: PF00171; Aldehyde dehydrogenase; E=0.21; NAD-dependent aldehyde dehydrogenase 4953841..4955331 Rhodopirellula baltica SH 1 1793730 NP_868790.1 CDS RB9266 NC_005027.1 4955344 4955742 D hypothetical protein 4955344..4955742 Rhodopirellula baltica SH 1 1795799 NP_868791.1 CDS flbD NC_005027.1 4955675 4955920 D best DB hits: BLAST: pir:A72347; hypothetical protein TM0675 - Thermotoga maritima; E=1e-08 ddbj:BAB06167.1; (AP001515) BH2448~unknown conserved protein in; E=4e-05 pir:B70135; flagellar protein (flbD) homolog - Lyme disease; E=3e-04 COG: TM0675; COG1582 Uncharacterized protein, possibly involved in; E=1e-09; flagellar protein (flbD)-like protein 4955675..4955920 Rhodopirellula baltica SH 1 1797154 NP_868792.1 CDS pomA NC_005027.1 4955939 4956700 D PMID: 99254111 best DB hits: BLAST: swissprot:P46826; YTXD_BACME HYPOTHETICAL 29.3 KD PROTEIN IN CCPA; E=9e-35 swissprot:O06873; POMA_VIBAL CHEMOTAXIS POMA PROTEIN -----; E=2e-31 gb:AAD15904.1; (AF069391) sodium-driven polar flagellar protein; E=3e-31 COG: BS_ytxD; COG1291 Flagellar motor component; E=5e-32 PFAM: PF01618; MotA/TolQ/ExbB proton channel famil; E=0.0002; chemotaxis pomA protein 4955939..4956700 Rhodopirellula baltica SH 1 1794107 NP_868793.1 CDS motB NC_005027.1 4956700 4957455 D PMID: 7934817 PMID: 9387221 PMID: 1447140 best DB hits: BLAST: swissprot:P39064; YTXE_BACSU HYPOTHETICAL 27.6 KD PROTEIN IN ACUC; E=2e-10 gb:AAB94398.1; (U91841) MotB homolog [Bacillus firmus]; E=3e-09 ddbj:BAB06958.1; (AP001518) BH3239~unknown conserved protein; E=2e-07 COG: BS_ytxE; COG1360 Flagellar motor protein; E=2e-11 PA0973; COG2885 Outer membrane protein and related; E=5e-05 PFAM: PF00691; OmpA family; E=1.4e-11; MotB-like protein 4956700..4957455 Rhodopirellula baltica SH 1 1793200 NP_868794.1 CDS RB9273 NC_005027.1 4957465 4958022 D PMID: 10368162 best DB hits: BLAST: gb:AAC05584.1; (AF006075) dihydrolipoamide acetyltransferase; E=0.090 swissprot:O31550; ACOC_BACSU DIHYDROLIPOAMIDE ACETYLTRANSFERASE; E=0.090 COG: BS_acoC; COG0508 Dihydrolipoamide acyltransferases; E=0.009; dihydrolipoamide acetyltransferase 4957465..4958022 Rhodopirellula baltica SH 1 1794148 NP_868795.1 CDS fliN NC_005027.1 4958039 4958464 D PMID: 2656645 PMID: 2651416 best DB hits: BLAST: swissprot:P35539; FLIN_ERWCA FLAGELLAR MOTOR SWITCH PROTEIN FLIN; E=5e-16 swissprot:P24073; FLIY_BACSU FLAGELLAR MOTOR SWITCH PROTEIN FLIY; E=8e-16 swissprot:P26419; FLIN_SALTY FLAGELLAR MOTOR SWITCH PROTEIN FLIN; E=2e-15 COG: BS_fliY_2; COG1886 Flagellar motor switch/type III secretory pathway; E=6e-17 PFAM: PF01052; Surface presentation of antigens (SP; E=2.5e-25; flagellar motor switch protein fliN (fragment) 4958039..4958464 Rhodopirellula baltica SH 1 1793904 NP_868796.1 CDS RB9276 NC_005027.1 4958461 4959162 D best DB hits: BLAST: swissprot:P49080; AKH2_MAIZE BIFUNCTIONAL ASPARTOKINASEHOMOSERINE; E=0.43; bifunctional aspartokinase/homoserine dehydrogenase 2 4958461..4959162 Rhodopirellula baltica SH 1 1794631 NP_868797.1 CDS phr NC_005027.1 4959131 4961644 R PMID: 7813451 PMID: 2668276 best DB hits: BLAST: pir:A83065; hypothetical protein PA4657 [imported] - Pseudomonas; E=4e-47 swissprot:P12769; PHR_METTH DEOXYRIBODIPYRIMIDINE PHOTOLYASE (DNA; E=6e-41 swissprot:P34205; PHR_CARAU DEOXYRIBODIPYRIMIDINE PHOTOLYASE (DNA; E=4e-37 COG: PA4657; COG3380 Predicted NAD/FAD-dependent oxidoreductase; E=3e-48 MTH904; COG0415 Deoxyribodipyrimidine photolyase; E=5e-42 sll1135; COG3380 Predicted NAD/FAD-dependent oxidoreductase; E=1e-21 PFAM: PF00875; DNA photolyase; E=6.3e-06 PF02254; KTN NAD-binding domain; E=0.19 PF01266; D-amino acid oxidase; E=0.0088; deoxyribodipyrimidine photolyase complement(4959131..4961644) Rhodopirellula baltica SH 1 1795049 NP_868798.1 CDS pds NC_005027.1 4961732 4963150 R PMID: 97227932 PMID: 1594600 best DB hits: BLAST: pir:T35402; probable phytoene dehydrogenase - Streptomyces; E=7e-25 pir:T10701; probable phytoene dehydrogenase (EC 1.3.-.-) - green; E=3e-18 embl:CAA60479.1; (X86783) Phytoene desaturase [Haematococcus; E=1e-15 COG: slr1254; COG3349 Uncharacterized ACR; E=5e-14 PFAM: PF01593; Flavin containing amine oxidase; E=0.51 PF01494; FAD binding domain; E=0.00029 PF01266; D-amino acid oxidase; E=0.019; phytoene dehydrogenase complement(4961732..4963150) Rhodopirellula baltica SH 1 1794582 NP_868799.1 CDS crtB NC_005027.1 4963147 4964157 R PMID: 1537409 best DB hits: BLAST: pir:T35400; probable phytoene synthase - Streptomyces coelicolor; E=5e-25 pir:A81118; phytoene synthase, probable NMB1130, NMB1168 [imported]; E=3e-21 swissprot:P37269; CRTB_SYNP7 PHYTOENE SYNTHASE ----- pir:; E=5e-21 COG: NMB1130; COG1562 Phytoene/squalene synthetase; E=3e-22 PFAM: PF00494; Squalene/phytoene synthase; E=0.0026; phytoene synthase complement(4963147..4964157) Rhodopirellula baltica SH 1 1792814 NP_868800.1 CDS ctrB NC_005027.1 4964154 4965053 R PMID: 20175755 PMID: 1537409 best DB hits: BLAST: pir:H81074; phytoene synthase-related protein NMB1521 [imported] -; E=6e-38 pir:D81868; probable transferase NMA1721 [imported] - Neisseria; E=2e-37 pir:T35399; probable phytoene synthase - Streptomyces coelicolor; E=2e-25 COG: NMB1521; COG1562 Phytoene/squalene synthetase; E=5e-39 PFAM: PF00494; Squalene/phytoene synthase; E=2.8e-23; phytoene synthase complement(4964154..4965053) Rhodopirellula baltica SH 1 1792722 NP_868801.1 CDS lytB NC_005027.1 4965373 4966332 D PMID: 11818558 best DB hits: BLAST: pir:G83076; LytB protein PA4557 [imported] - Pseudomonas aeruginosa; E=4e-81 gb:AAD55804.1; (AF027189) LytB [Acinetobacter sp. BD413]; E=1e-80 pir:G82293; lytB protein VC0685 [imported] - Vibrio cholerae (group; E=7e-77 COG: PA4557; COG0761 Penicillin tolerance protein; E=4e-82 PFAM: PF02401; LytB protein; E=2.4e-132; LytB protein 4965373..4966332 Rhodopirellula baltica SH 1 1796398 NP_868802.1 CDS RB9289 NC_005027.1 4966456 4969701 R best DB hits: BLAST: ddbj:BAA91540.1; (AK001182) unnamed protein product [Homo sapiens]; E=9e-08 embl:CAB98267.1; (AJ276171) ASPIC [Homo sapiens]; E=1e-07 embl:CAB98268.1; (AJ276171) ASPIC [Homo sapiens] ----- embl:; E=1e-07 COG: nfrA; COG0457 TPR-repeat-containing proteins; E=0.002; hypothetical protein complement(4966456..4969701) Rhodopirellula baltica SH 1 1794622 NP_868803.1 CDS glgX NC_005027.1 4969727 4971928 R PMID: 97061201 PMID: 10333591 PMID: 10669803 best DB hits: BLAST: pir:S77094; glycogen operon protein (EC 3.2.1.-) glgX-2 -; E=1e-149 pir:S74546; glycogen operon protein (EC 3.2.1.-) glgX-1 -; E=1e-139 embl:CAB92884.1; (AL356932) glycogen debranching enzyme.; E=1e-136 COG: slr1857; COG1523 Pullulanase and related glycosidases; E=1e-151 DR0464; COG0296 1,4-alpha-glucan branching enzyme; E=3e-17 DR0405; COG1523 Pullulanase and related glycosidases; E=3e-12 PFAM: PF02922; Isoamylase N-terminal domain; E=1.3e-22 PF00128; Alpha amylase, catalytic domain; E=9.7e-21; glycogen operon protein glgX-2 complement(4969727..4971928) Rhodopirellula baltica SH 1 1791423 NP_868804.1 CDS RB9294 NC_005027.1 4972084 4972386 R hypothetical protein complement(4972084..4972386) Rhodopirellula baltica SH 1 1793847 NP_868805.1 CDS RB9296 NC_005027.1 4972307 4972768 D hypothetical protein 4972307..4972768 Rhodopirellula baltica SH 1 1797215 NP_868806.1 CDS RB9298 NC_005027.1 4972886 4973878 R best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein complement(4972886..4973878) Rhodopirellula baltica SH 1 1794184 NP_868807.1 CDS RB9301 NC_005027.1 4974088 4974270 R hypothetical protein complement(4974088..4974270) Rhodopirellula baltica SH 1 1795579 NP_868808.1 CDS rpmE NC_005027.1 4974378 4974623 D PMID: 339950 best DB hits: BLAST: pir:C81433; 50S ribosomal protein L31 Cj0155c [imported] -; E=2e-17 swissprot:O66075; RL31_TREPA 50S RIBOSOMAL PROTEIN L31 -----; E=9e-17 swissprot:P45834; RL31_MYCLE 50S RIBOSOMAL PROTEIN L31 -----; E=5e-16 COG: Cj0155c; COG0254 Ribosomal protein L31; E=2e-18 PFAM: PF01197; Ribosomal protein L31; E=1.6e-37; 50S ribosomal protein L31 4974378..4974623 Rhodopirellula baltica SH 1 1796982 NP_868809.1 CDS prfA NC_005027.1 4974620 4975702 D PMID: 9353933 PMID: 8662205 best DB hits: BLAST: swissprot:P45872; RF1_BACSU PEPTIDE CHAIN RELEASE FACTOR 1 (RF-1); E=1e-80 swissprot:P43917; RF1_HAEIN PEPTIDE CHAIN RELEASE FACTOR 1 (RF-1); E=2e-79 gb:AAK02639.1; (AE006091) PrfA [Pasteurella multocida]; E=6e-79 COG: BS_prfA; COG0216 Protein chain release factor A; E=1e-81 PFAM: PF00472; Peptidyl-tRNA hydrolase domain; E=2.2e-66; peptide chain release factor 1 4974620..4975702 Rhodopirellula baltica SH 1 1796091 NP_868810.1 CDS hemK NC_005027.1 4975706 4976596 D PMID: 11805295 best DB hits: BLAST: pir:A82109; hemK protein VC2178 [imported] - Vibrio cholerae (group; E=4e-33 ddbj:BAB07493.1; (AP001519) protoporphyrinogen oxidase [Bacillus; E=7e-33 swissprot:P45873; HEMK_BACSU HEMK PROTEIN HOMOLOG ----- pir:; E=8e-32 COG: VC2178; COG2890 Predicted rRNA or tRNA methylase; E=4e-34 PFAM: PF02390; methyltransferase; E=0.19; hemK protein 4975706..4976596 Rhodopirellula baltica SH 1 1795947 NP_868811.1 CDS RB9307 NC_005027.1 4976727 4976945 D hypothetical protein 4976727..4976945 Rhodopirellula baltica SH 1 1791652 NP_868812.1 CDS RB9308 NC_005027.1 4976960 4978849 R best DB hits: PFAM: PF02321; Outer membrane efflux protein; E=5.8e-06; hypothetical protein complement(4976960..4978849) Rhodopirellula baltica SH 1 1795245 NP_868813.1 CDS RB9310 NC_005027.1 4978793 4979035 D hypothetical protein 4978793..4979035 Rhodopirellula baltica SH 1 1790334 NP_868814.1 CDS RB9311 NC_005027.1 4979077 4980462 D best DB hits: PFAM: PF00364; Biotin-requiring enzyme; E=0.13 PF02749; Quinolinate phosphoribosyl tran; E=0.19; hypothetical protein 4979077..4980462 Rhodopirellula baltica SH 1 1792718 NP_868815.1 CDS RB9313 NC_005027.1 4980456 4981586 D PMID: 11004187 best DB hits: BLAST: swissprot:P77239; YLCD_ECOLI HYPOTHETICAL 44.3 KDA PROTEIN IN; E=0.003 gb:AAG54907.1; AE005237_3 (AE005237) resistance protein; E=0.003 pir:A72386; conserved hypothetical protein - Thermotoga maritima; E=0.037 COG: ylcD; COG0845 Membrane-fusion protein; E=3e-04 PFAM: PF00364; Biotin-requiring enzyme; E=0.0042 PF00529; HlyD family secretion protein; E=0.005 PF00364; Biotin-requiring enzyme; E=0.0068; copper efflux system protein cusB (precursor) 4980456..4981586 Rhodopirellula baltica SH 1 1793845 NP_868816.1 CDS RB9315 NC_005027.1 4981583 4983793 D best DB hits: BLAST: pir:G82300; conserved hypothetical protein VC0628 [imported] -; E=0.002 pir:F70091; hypothetical protein yydH - Bacillus subtilis -----; E=0.14 pir:D70385; hypothetical protein aq_986 - Aquifex aeolicus -----; E=0.31 COG: VC0628; COG0845 Membrane-fusion protein; E=2e-04 PFAM: PF02163; Sterol-regulatory element bindi; E=6.4e-05; hypothetical protein 4981583..4983793 Rhodopirellula baltica SH 1 1796298 NP_868817.1 CDS RB9317 NC_005027.1 4983811 4989579 R PMID: 99000809 PMID: 97000351 best DB hits: BLAST: pir:G71532; probable threoninetyrosine-specific protein kinase (EC; E=4e-30 gb:AAF73573.1; (AE002326) serinethreonine protein kinase; E=3e-27 embl:CAB45034.1; (AL078635) WD-repeat containing protein; E=3e-26 COG: CT301_1; COG0515 Serine/threonine protein kinases; E=3e-31 sll0163; COG2319 WD40 repeat protein; E=1e-19 Rv1266c; COG0515 Serine/threonine protein kinases; E=1e-19 PFAM: PF00069; Protein kinase domain; E=1.1e-26 PF00400; WD domain, G-beta repeat; E=7.5e-06; threonine/tyrosine-specific protein kinase complement(4983811..4989579) Rhodopirellula baltica SH 1 1791527 NP_868818.1 CDS RB9320 NC_005027.1 4989569 4992178 R best DB hits: PFAM: PF00956; Nucleosome assembly protein (NAP); E=0.78; hypothetical protein complement(4989569..4992178) Rhodopirellula baltica SH 1 1792543 NP_868819.1 CDS RB9322 NC_005027.1 4992331 4992459 R hypothetical protein complement(4992331..4992459) Rhodopirellula baltica SH 1 1796913 NP_868820.1 CDS RB9324 NC_005027.1 4992474 4993277 D signal peptide 4992474..4993277 Rhodopirellula baltica SH 1 1797155 NP_868821.1 CDS RB9326 NC_005027.1 4993426 4994358 D PMID: 20222556 best DB hits: BLAST: pir:H81856; hypothetical protein NMA1628 [imported] - Neisseria; E=1e-17 pir:C81085; conserved hypothetical protein NMB1417 [imported] -; E=4e-17 embl:CAC01390.1; (AJ131360) WlaX protein [Campylobacter jejuni]; E=7e-17 COG: NMB1417; COG3298 Predicted 3'-5' exonuclease related to the; E=4e-18; hypothetical protein 4993426..4994358 Rhodopirellula baltica SH 1 1796069 NP_868822.1 CDS RB9327 NC_005027.1 4994375 4995406 D hypothetical protein 4994375..4995406 Rhodopirellula baltica SH 1 1792322 NP_868823.1 CDS RB9329 NC_005027.1 4995491 4996729 D best DB hits: BLAST: embl:CAB45034.1; (AL078635) WD-repeat containing protein; E=1e-12 swissprot:Q00808; HET1_PODAN VEGETATIBLE INCOMPATIBILITY PROTEIN; E=5e-12 gb:AAG40737.1; AF299085_1 (AF299085) Bap1 [Myxococcus xanthus]; E=3e-09 COG: slr0143_2; COG2319 WD40 repeat protein; E=2e-09 PFAM: PF00400; WD domain, G-beta repeat; E=0.87; hypothetical protein 4995491..4996729 Rhodopirellula baltica SH 1 1794783 NP_868824.1 CDS RB9330 NC_005027.1 4996801 5002071 D PMID: 99098700 PMID: 98261511 best DB hits: BLAST: pir:T28679; fibrinogen-binding protein homolog - Staphylococcus aureus; E=9e-46 gb:AAF72509.1; AF245041_1 (AF245041) cell-surface adhesin; E=1e-37 embl:CAB75732.1; (Y18653) bone sialoprotein-binding protein; E=6e-24; fibrinogen-binding protein 4996801..5002071 Rhodopirellula baltica SH 1 1794468 NP_868825.1 CDS RB9337 NC_005027.1 5002119 5002295 D hypothetical protein 5002119..5002295 Rhodopirellula baltica SH 1 1790074 NP_868826.1 CDS fae NC_005027.1 5002305 5002853 D PMID: 11073907 PMID: 9651254 best DB hits: BLAST: pir:D69063; conserved hypothetical protein MTH1474 -; E=2e-16 gb:AAB89943.1; (AE001014) D-arabino 3-hexulose 6-phosphate; E=7e-13 gb:AAG32954.1; (AF032114) formaldehyde-activating enzyme; E=3e-10 COG: MTH1474_1; COG1795 Uncharacterized archaeal domain; E=1e-17; formaldehyde-activating enzyme 5002305..5002853 Rhodopirellula baltica SH 1 1795811 NP_868827.1 CDS cpcE NC_005027.1 5002928 5003644 R PMID: 9882677 best DB hits: BLAST: pir:S74670; hypothetical protein sll1663 - Synechocystis sp. (strain; E=0.069 pir:D69108; phycocyanin alpha phycocyanobilin lyase CpcE -; E=0.20 pir:F83358; hypothetical protein PA2293 [imported] - Pseudomonas; E=0.35 COG: sll1663; COG1413 Phycocyanin alpha-subunit phycocyanobilin lyase and; E=0.007; phycocyanin alpha phycocyanobilin lyase CpcE complement(5002928..5003644) Rhodopirellula baltica SH 1 1791346 NP_868828.1 CDS RB9342 NC_005027.1 5003578 5003808 D hypothetical protein 5003578..5003808 Rhodopirellula baltica SH 1 1793695 NP_868829.1 CDS RB9343 NC_005027.1 5003789 5003968 D hypothetical protein 5003789..5003968 Rhodopirellula baltica SH 1 1791229 NP_868830.1 CDS RB9344 NC_005027.1 5003979 5008139 D best DB hits: BLAST: pir:D83545; probable helicase PA0799 [imported] - Pseudomonas; E=2e-96 embl:CAA67095.1; (X98455) SNF [Bacillus cereus]; E=8e-90 embl:CAB60181.1; (AL132824) helicase [Streptomyces; E=1e-86 COG: PA0799; COG0553 Superfamily II DNA/RNA helicases, SNF2 family; E=2e-97 PFAM: PF02561; Flagellar protein FliS; E=0.63 PF02156; Glycosyl hydrolase 26; E=0.62 PF00176; SNF2 and others N-terminal dom; E=1.5e-71; SWF/SNF family helicase 5003979..5008139 Rhodopirellula baltica SH 1 1790517 NP_868831.1 CDS RB9345 NC_005027.1 5008092 5008376 R hypothetical protein complement(5008092..5008376) Rhodopirellula baltica SH 1 1794926 NP_868832.1 CDS RB9346 NC_005027.1 5008335 5008550 D hypothetical protein 5008335..5008550 Rhodopirellula baltica SH 1 1795960 NP_868833.1 CDS RB9347 NC_005027.1 5008394 5008600 R hypothetical protein complement(5008394..5008600) Rhodopirellula baltica SH 1 1790009 NP_868834.1 CDS RB9348 NC_005027.1 5008536 5008826 R hypothetical protein complement(5008536..5008826) Rhodopirellula baltica SH 1 1796187 NP_868835.1 CDS RB9349 NC_005027.1 5008812 5009219 D hypothetical protein 5008812..5009219 Rhodopirellula baltica SH 1 1796645 NP_868836.1 CDS RB9350 NC_005027.1 5009312 5011513 R hypothetical protein complement(5009312..5011513) Rhodopirellula baltica SH 1 1791493 NP_868837.1 CDS RB9351 NC_005027.1 5011447 5011785 D hypothetical protein 5011447..5011785 Rhodopirellula baltica SH 1 1796081 NP_868838.1 CDS RB9352 NC_005027.1 5011516 5011746 R PMID: 2585490 best DB hits: BLAST: embl:CAA35604.1; (X17591) HsdS polypeptide, part of CfrA family; E=0.17 pir:NDECAS; type I site-specific deoxyribonuclease (EC 3.1.21.3); E=0.17 swissprot:P19705; T1SE_ECOLI TYPE I RESTRICTION ENZYME ECOEI; E=0.17; polypeptide HsdS complement(5011516..5011746) Rhodopirellula baltica SH 1 1797186 NP_868839.1 CDS RB9353 NC_005027.1 5011753 5011917 R PMID: 7607524 best DB hits: BLAST: swissprot:P50196; MTE8_ECOLI MODIFICATION METHYLASE ECO47II; E=0.004 swissprot:P55393; Y4CK_RHISN REPLICATION PROTEIN A; E=0.35; modification methylase- transcriptional regulator complement(5011753..5011917) Rhodopirellula baltica SH 1 1796653 NP_868840.1 CDS RB9354 NC_005027.1 5011855 5012406 D hypothetical protein 5011855..5012406 Rhodopirellula baltica SH 1 1792438 NP_868841.1 CDS RB9356 NC_005027.1 5012382 5012771 R hypothetical protein complement(5012382..5012771) Rhodopirellula baltica SH 1 1797217 NP_868842.1 CDS rtcA NC_005027.1 5012956 5014053 R catalyzes the conversion of terminal3'-phosphate of RNA to the 2',3'-cyclicphosphodiester; RNA 3'-terminal-phosphate cyclase complement(5012956..5014053) Rhodopirellula baltica SH 1 1792216 NP_868843.1 CDS rtcB NC_005027.1 5014031 5015563 R PMID: 9738023 best DB hits: BLAST: pir:E72265; conserved hypothetical protein - Thermotoga maritima; E=1e-45 gb:AAB90372.1; (AE001044) conserved hypothetical protein; E=3e-43 pir:B69080; conserved hypothetical protein MTH1597 -; E=2e-40 COG: TM1357; COG1690 Uncharacterized ACR; E=1e-46 PFAM: PF01139; Uncharacterized protein family UPF00; E=3e-38 PF00367; phosphotransferase system, EIIB; E=0.44; hypothetical protein complement(5014031..5015563) Rhodopirellula baltica SH 1 1796390 NP_868844.1 CDS rtcR NC_005027.1 5015748 5017364 D PMID: 9738023 best DB hits: BLAST: pir:C83074; transcriptional regulator RtcR PA4581 [imported] -; E=1e-163 swissprot:P38035; RTCR_ECOLI transcriptional regulator; E=1e-162 gb:AAA58220.1; (U18997) ORF_o532 [Escherichia coli]; E=1e-161 COG: rtcR_2; COG1221 NtrC family transcriptional regulators, ATPase; E=1e-111 atoC; COG2204 AAA superfamily ATPases with N-terminal receiver; E=8e-38 aq_218_2; COG1221 NtrC family transcriptional regulators, ATPase; E=3e-37 PFAM: PF00004; ATPase associated with variou; E=0.29 PF00158; Sigma-54 interaction domain; E=4e-84; transcriptional regulator RtcR 5015748..5017364 Rhodopirellula baltica SH 1 1792806 NP_868845.1 CDS RB9365 NC_005027.1 5017351 5017809 D hypothetical protein 5017351..5017809 Rhodopirellula baltica SH 1 1795668 NP_868846.1 CDS RB9366 NC_005027.1 5017918 5018946 R best DB hits: BLAST: swissprot:P39879; YK26_PSEAE HYPOTHETICAL PROTEIN PA2026 -----; E=7e-06 gb:AAG57528.1; AE005471_5 (AE005471) cytochrome oxidase; E=0.004 ddbj:BAA16281.1; (D90870) similar to [SwissProt Accession Number; E=0.015 COG: PA2026; COG0385 Predicted Na+-dependent transporter; E=7e-07; sodium-dependent transporter complement(5017918..5018946) Rhodopirellula baltica SH 1 1796641 NP_868847.1 CDS lolI NC_005027.1 5018952 5019971 R PMID: 7952181 best DB hits: BLAST: swissprot:P42419; IOLI_BACSU IOLI PROTEIN ----- pir: A69646; E=3e-12 ddbj:BAB06034.1; (AP001515) myo-inositol catabolism [Bacillus; E=1e-08 pir:D83615; hypothetical protein PA0242 [imported] - Pseudomonas; E=1e-05 COG: BS_iolI; COG1082 Predicted endonucleases; E=3e-13; xylose isomerase complement(5018952..5019971) Rhodopirellula baltica SH 1 1791519 NP_868848.1 CDS RB9369 NC_005027.1 5020156 5020713 R hypothetical protein complement(5020156..5020713) Rhodopirellula baltica SH 1 1795344 NP_868849.1 CDS hisH NC_005027.1 5020746 5021363 R PMID: 3062174 PMID: 8494895 PMID: 11551184 best DB hits: BLAST: swissprot:O66943; HIS5_AQUAE AMIDOTRANSFERASE HISH ----- pir:; E=9e-37 gb:AAA81252.1; (U30821) glutamine amidotransferase [Cyanophora; E=7e-34 swissprot:O27568; HIS5_METTH AMIDOTRANSFERASE HISH ----- pir:; E=3e-33 COG: aq_732; COG0118 Glutamine amidotransferase; E=9e-38 PFAM: PF00117; Glutamine amidotransferase class-I; E=8.1e-34; amidotransferase hisH complement(5020746..5021363) Rhodopirellula baltica SH 1 1790178 NP_868850.1 CDS recQ NC_005027.1 5021612 5023600 R PMID: 3027506 PMID: 2164680 best DB hits: BLAST: gb:AAK05906.1; AE006411_1 (AE006411) ATP-dependent DNA helicase; E=9e-60 pir:E83226; ATP-dependent DNA helicase RecQ PA3344 [imported] -; E=4e-58 pir:G75413; DNA helicase RecQ - Deinococcus radiodurans (strain R1); E=1e-56 COG: PA3344; COG0514 Superfamily II DNA helicase; E=4e-59 YPL119c; COG0513 Superfamily II DNA and RNA helicases; E=5e-12 PFAM: PF00270; DEAD/DEAH box helicase; E=1e-32 PF00271; Helicase conserved C-terminal d; E=3.8e-26; ATP-dependent DNA helicase RecQ complement(5021612..5023600) Rhodopirellula baltica SH 1 1796797 NP_868851.1 CDS RB9376 NC_005027.1 5023619 5029102 R PMID: 9441671 best DB hits: BLAST: pir:T30213; G-cadherin - sea urchin (Lytechinus variegatus) -----; E=9e-17 ddbj:BAA84069.1; (AB028498) Flamingo [Drosophila melanogaster]; E=5e-14 gb:AAF02618.1; AF172329_1 (AF172329) starry night protein; E=5e-14 PFAM: PF00028; Cadherin domain; E=7.1e-08; G-cadherin complement(5023619..5029102) Rhodopirellula baltica SH 1 1793651 NP_868852.1 CDS RB9380 NC_005027.1 5029125 5029487 R hypothetical protein complement(5029125..5029487) Rhodopirellula baltica SH 1 1791485 NP_868853.1 CDS htrA NC_005027.1 5029471 5030859 D PMID: 8576051 best DB hits: BLAST: swissprot:P18584; DEGP_CHLTR PROBABLE SERINE PROTEASE DO-LIKE; E=2e-39 pir:B81728; serine proteinase, HtrADegQ/DegS family TC0210; E=4e-39 swissprot:Q9Z6T0; DEGP_CHLPN PROBABLE SERINE PROTEASE DO-LIKE; E=2e-36 COG: CT823; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=2e-40 CPn0979; COG0265 Trypsin-like serine proteases, typically; E=2e-37 degQ; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=4e-31 PFAM: PF00089; Trypsin; E=3.9e-17 PF00595; PDZ domain (Also known as DHR or GLG; E=1.5e-07; serine protease do-like [precursor] 5029471..5030859 Rhodopirellula baltica SH 1 1797183 NP_868854.1 CDS rbsC NC_005027.1 5030902 5032212 R PMID: 11337471 PMID: 7921236 best DB hits: BLAST: gb:AAK05734.1; AE006394_4 (AE006394) ribose ABC transporter; E=1e-16 pir:G72416; sugar ABC transporter, permease - Thermotoga; E=3e-16 pir:B69690; ribose ABC transporter (permease) rbsC - Bacillus; E=3e-16 COG: TM0112; COG1172 Ribose/xylose/arabinose/galactoside ABC-type; E=3e-17 rbsC; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport; E=2e-14 VCA0129; COG1172 Ribose/xylose/arabinose/galactoside ABC-type; E=3e-14 PFAM: PF02653; Branched-chain amino acid transp; E=6e-09; ribose ABC transporter permease complement(5030902..5032212) Rhodopirellula baltica SH 1 1795841 NP_868855.1 CDS rbsA NC_005027.1 5032209 5033732 R PMID: 3011793 PMID: 3086314 best DB hits: BLAST: gb:AAG59288.1; AE005642_7 (AE005642) ATP-binding protein; E=8e-88 ddbj:BAB06041.1; (AP001515) sugar ABC transporter (ATP-binding; E=1e-86 ddbj:BAB07449.1; (AP001519) ribose ABC transporter (ATP-binding; E=2e-86 COG: BH2322; COG1129 ABC-type sugar (aldose) transport system, ATPase; E=1e-87 PFAM: PF00005; ABC transporter; E=2.1e-51; ribose ABC transporter ATP-binding protein complement(5032209..5033732) Rhodopirellula baltica SH 1 1795786 NP_868856.1 CDS fixW NC_005027.1 5033729 5034937 R PMID: 2555670 PMID: 2137818 best DB hits: BLAST: swissprot:P14312; FIXW_RHILE FIXW PROTEIN ----- pir: JQ0313; E=7e-12 swissprot:P36893; HELX_RHOCA THIOL:DISULFIDE INTERCHANGE PROTEIN; E=1e-08 pir:C70314; thiol-disulfide interchange protein tlpA [imported] -; E=3e-05 COG: aq_152; COG0526 Thiol-disulfide isomerase and thioredoxins; E=3e-06 PFAM: PF00085; Thioredoxin; E=4.6e-05; FixW protein complement(5033729..5034937) Rhodopirellula baltica SH 1 1789965 NP_868857.1 CDS RB9388 NC_005027.1 5034987 5035370 D hypothetical protein 5034987..5035370 Rhodopirellula baltica SH 1 1789959 NP_868858.1 CDS RB9389 NC_005027.1 5034998 5035390 R hypothetical protein complement(5034998..5035390) Rhodopirellula baltica SH 1 1795637 NP_868859.1 CDS RB9390 NC_005027.1 5035453 5038491 D PMID: 11823852 best DB hits: PFAM: PF00263; Bacterial type II and III secretion; E=0.68; signal peptide 5035453..5038491 Rhodopirellula baltica SH 1 1791180 NP_868860.1 CDS RB9392 NC_005027.1 5037580 5038107 R signal peptide complement(5037580..5038107) Rhodopirellula baltica SH 1 1795633 NP_868861.1 CDS RB9395 NC_005027.1 5038491 5041415 D best DB hits: BLAST: swissprot:O54101; MMLB_STRCO MEMBRANE PROTEIN SC10A5.10C; E=2e-29 swissprot:P96706; YDGH_BACSU MEMBRANE PROTEIN YDGH; E=3e-17 swissprot:Q53902; MMLA_STRCO MEMBRANE PROTEIN ACTII-3; E=1e-15 COG: BS_ydgH; COG2409 Predicted transporters; E=3e-18 AF0459; COG1033 Membrane proteins related to SecD/SecF; E=3e-07 BS_ydfJ; COG2409 Predicted transporters; E=3e-07; membrane protein- transporter 5038491..5041415 Rhodopirellula baltica SH 1 1792353 NP_868862.1 CDS RB9399 NC_005027.1 5041464 5041676 D signal peptide 5041464..5041676 Rhodopirellula baltica SH 1 1790610 NP_868863.1 CDS miaB NC_005027.1 5041673 5043112 D PMID: 20042346 best DB hits: BLAST: swissprot:Q57163; YLEA_HAEIN HYPOTHETICAL PROTEIN HI0019 -----; E=2e-87 gb:AAK03085.1; (AE006140) unknown [Pasteurella multocida]; E=3e-85 pir:C81034; conserved hypothetical protein NMB1866 [imported] -; E=3e-85 COG: HI0019; COG0621 Fe-S oxidoreductases family 1; E=2e-88 PFAM: PF00919; Uncharacterized protein family UPF00; E=1e-42; MiaB protein- tRNA-thiotransferase 5041673..5043112 Rhodopirellula baltica SH 1 1792437 NP_868864.1 CDS RB9402 NC_005027.1 5043252 5044550 D PMID: 9634230 best DB hits: BLAST: pir:A75264; hypothetical protein - Deinococcus radiodurans (strain; E=2e-36 gb:AAF78805.1; (U33883) mitochondrial processing peptidase-like; E=1e-35 swissprot:O86835; YA12_STRCO HYPOTHETICAL ZINC PROTEASE SC9A10.02; E=7e-26 COG: DR2516; COG0612 Predicted Zn-dependent peptidases; E=2e-37; zinc protease 5043252..5044550 Rhodopirellula baltica SH 1 1794713 NP_868865.1 CDS RB9404 NC_005027.1 5044547 5045809 D best DB hits: BLAST: swissprot:O33324; YR82_MYCTU HYPOTHETICAL ZINC PROTEASE RV2782C; E=3e-47 swissprot:O32965; YR82_MYCLE HYPOTHETICAL ZINC PROTEASE MLCB22.26C; E=7e-44 pir:H75263; probable zinc proteinase - Deinococcus radiodurans; E=9e-43 COG: Rv2782c; COG0612 Predicted Zn-dependent peptidases; E=3e-48 PFAM: PF00675; Insulinase (Peptidase M1; E=4.8e-38; zinc protease 5044547..5045809 Rhodopirellula baltica SH 1 1792671 NP_868866.1 CDS RB9405 NC_005027.1 5045817 5047787 D hypothetical protein 5045817..5047787 Rhodopirellula baltica SH 1 1790031 NP_868867.1 CDS RB9409 NC_005027.1 5047798 5048169 R hypothetical protein complement(5047798..5048169) Rhodopirellula baltica SH 1 1796473 NP_868868.1 CDS RB9410 NC_005027.1 5048166 5048582 R hypothetical protein complement(5048166..5048582) Rhodopirellula baltica SH 1 1796243 NP_868869.1 CDS RB9411 NC_005027.1 5048517 5049893 D PMID: 20002534 PMID: 20225833 best DB hits: BLAST: gb:AAD38020.1; AF148127_1 (AF148127) transposase [Porphyromonas; E=2e-13 ddbj:BAA83477.1; (AB009361) transposase [Porphyromonas; E=3e-13 ddbj:BAA92234.1; (AB031551) transposase [Bacillus subtilis]; E=4e-10 COG: BH0691; COG3385 Predicted transposase; E=4e-10 PFAM: PF01609; Transposase (IS4 family); E=6.2e-08; transposase 5048517..5049893 Rhodopirellula baltica SH 1 1796625 NP_868870.1 CDS RB9412 NC_005027.1 5049820 5050239 D signal peptide 5049820..5050239 Rhodopirellula baltica SH 1 1794852 NP_868871.1 CDS RB9414 NC_005027.1 5050290 5050445 R hypothetical protein complement(5050290..5050445) Rhodopirellula baltica SH 1 1789974 NP_868872.1 CDS RB9415 NC_005027.1 5050419 5050529 D hypothetical protein 5050419..5050529 Rhodopirellula baltica SH 1 1796139 NP_868873.1 CDS RB9417 NC_005027.1 5050621 5050932 D hypothetical protein 5050621..5050932 Rhodopirellula baltica SH 1 1794947 NP_868874.1 CDS RB9418 NC_005027.1 5051079 5053283 R best DB hits: BLAST: swissprot:Q9R6X3; PHYB_ANASP CYANOBACTERIAL PHYTOCHROME B -----; E=5e-32 gb:AAB89763.1; (AE001000) signal-transducing histidine kinase; E=7e-28 pir:C75276; sensory box sensor histidine kinase - Deinococcus; E=5e-25 COG: DR2419_2; COG0642 Sensory transduction histidine kinases; E=5e-26 PFAM: PF00989; PAS domain; E=1.5e-06 PF00785; PAC motif; E=0.00034 PF00512; His Kinase A (phosphoacceptor) doma; E=1.3e-11; signal-transducing histidine kinase complement(5051079..5053283) Rhodopirellula baltica SH 1 1792623 NP_868875.1 CDS msaB NC_005027.1 5053377 5055368 R PMID: 8094880 PMID: 9575204 PMID: 11546864 best DB hits: BLAST: pir:G69815; ABC transporter (ATP-binding protein) homolog ygaD -; E=7e-74 ddbj:BAB04660.1; (AP001510) ABC transporter (ATP-binding protein); E=3e-66 swissprot:P27299; MSBA_ECOLI PROBABLE TRANSPORT ATP-BINDING; E=6e-65 COG: BS_ygaD; COG1132 ABC-type multidrug/protein/lipid transport system,; E=7e-75 PFAM: PF00664; ABC transporter transmembrane re; E=1.7e-13 PF01583; Adenylylsulfate kinase; E=0.7 PF01202; Shikimate kinase; E=0.27; ABC transporter ATP-binding protein complement(5053377..5055368) Rhodopirellula baltica SH 1 1790234 NP_868876.1 CDS RB9421 NC_005027.1 5055426 5057453 R best DB hits: BLAST: embl:CAB75310.1; (AL139164) lipoprotein [Streptomyces; E=0.011; lipoprotein complement(5055426..5057453) Rhodopirellula baltica SH 1 1796391 NP_868877.1 CDS RB9423 NC_005027.1 5056635 5057219 D PMID: 1629228 best DB hits: BLAST: gb:AAG22814.1; (AF299248) talin [Drosophila melanogaster]; E=0.78; talin 5056635..5057219 Rhodopirellula baltica SH 1 1793499 NP_868878.1 CDS RB9424 NC_005027.1 5057450 5058616 R best DB hits: BLAST: pir:G70121; conserved hypothetical protein BB0175 - Lyme disease; E=4e-10 pir:G82493; conserved hypothetical protein VCA0174 [imported] -; E=6e-09 swissprot:P71761; YE80_MYCTU HYPOTHETICAL 34.3 KDA PROTEIN RV1480; E=1e-08 COG: BB0175; COG1721 Uncharacterized ACR; E=3e-11 PFAM: PF01882; Protein of unknown function DUF58; E=3.1e-15; hypothetical protein complement(5057450..5058616) Rhodopirellula baltica SH 1 1795524 NP_868879.1 CDS RB9427 NC_005027.1 5058620 5060074 D best DB hits: BLAST: pir:T47637; hypothetical protein T5N23.140 - Arabidopsis thaliana; E=5e-20 swissprot:Q55874; Y103_SYNY3 HYPOTHETICAL 45.8 KD PROTEIN SLL0103; E=2e-18 swissprot:P76481; YFBK_ECOLI HYPOTHETICAL 63.6 KD PROTEIN IN; E=3e-18 COG: sll0103; COG2304 Protein containing von Willebrand factor (vWF) type; E=2e-19 yfbK; COG2304 Protein containing von Willebrand factor (vWF) type A; E=3e-19 PFAM: PF00092; von Willebrand factor type A domain; E=4.8e-06; hypothetical protein 5058620..5060074 Rhodopirellula baltica SH 1 1793908 NP_868880.1 CDS RB9428 NC_005027.1 5060081 5061778 D best DB hits: BLAST: embl:CAB64973.1; (AJ012050) VicK protein [Enterococcus faecalis]; E=2e-15 pir:C72228; sensor histidine kinase HpkA - Thermotoga maritima; E=5e-15 ddbj:BAB05664.1; (AP001513) two-component sensor histidine kinase; E=5e-15 COG: TM1654_2; COG0642 Sensory transduction histidine kinases; E=5e-16 PFAM: PF00193; Extracellular link domain; E=0.19 PF00512; His Kinase A (phosphoacceptor) doma; E=2.9e-16 PF02518; Histidine kinase-, DNA gyrase B-, p; E=6.3e-27; two-component sensor histidine kinase VicK 5060081..5061778 Rhodopirellula baltica SH 1 1794527 NP_868881.1 CDS cheY NC_005027.1 5061763 5062482 D PMID: 1454550 best DB hits: BLAST: embl:CAB90891.1; (AL355753) two-component system response; E=4e-40 swissprot:P37478; YYCF_BACSU HYPOTHETICAL 27.2 KD SENSORY; E=5e-40 gb:AAD10263.1; (AF036966) response regulator; E=9e-40 COG: BS_yycF; COG0745 Response regulators consisting of a CheY-like; E=5e-41 ompR; COG0745 Response regulators consisting of a CheY-like receiver; E=8e-37 TM1655; COG0745 Response regulators consisting of a CheY-like; E=7e-36 PFAM: PF00072; Response regulator receiver doma; E=3.9e-38 PF00486; Transcriptional regulatory prote; E=4.2e-23; two-component system response regulator 5061763..5062482 Rhodopirellula baltica SH 1 1790910 NP_868882.1 CDS RB9432 NC_005027.1 5062464 5063273 D signal peptide 5062464..5063273 Rhodopirellula baltica SH 1 1796422 NP_868883.1 CDS RB9433 NC_005027.1 5063294 5063998 R best DB hits: BLAST: pir:S76975; hypothetical protein - Synechocystis sp. (strain PCC; E=1e-10 pir:S74748; hypothetical protein slr0981 - Synechocystis sp. (strain; E=2e-08 pir:B70303; hypothetical protein aq_037 - Aquifex aeolicus -----; E=4e-08; hypothetical protein complement(5063294..5063998) Rhodopirellula baltica SH 1 1796363 NP_868884.1 CDS RB9434 NC_005027.1 5064002 5064139 R hypothetical protein complement(5064002..5064139) Rhodopirellula baltica SH 1 1794858 NP_868885.1 CDS pkn2 NC_005027.1 5064117 5067209 R PMID: 7774814 best DB hits: BLAST: embl:CAB94054.1; (AL358672) serinethreonine-protein; E=9e-43 swissprot:P54736; PKN2_MYXXA SERINETHREONINE-PROTEIN KINASE PKN2; E=4e-39 swissprot:Q10697; PKNJ_MYCTU PROBABLE SERINETHREONINE-PROTEIN; E=2e-38 COG: Rv2088; COG0515 Serine/threonine protein kinases; E=2e-39 PFAM: PF00069; Protein kinase domain; E=1.6e-54; serine/threonine-protein kinase complement(5064117..5067209) Rhodopirellula baltica SH 1 1797170 NP_868886.1 CDS sigY NC_005027.1 5067290 5067919 D best DB hits: BLAST: ddbj:BAB05334.1; (AP001512) RNA polymerase sigma factor Y; E=5e-04 swissprot:Q44583; NCCH_ALCXX RNA POLYMERASE SIGMA FACTOR NCCH; E=6e-04 embl:CAB55345.1; (AJ010584) ECF sigma factor [Streptomyces; E=6e-04 COG: BH1615; COG1595 DNA-directed RNA polymerase specialized sigma; E=4e-05 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=2.8e-10 PF00140; Sigma-70 factor; E=0.11; RNA polymerase sigma factor Y 5067290..5067919 Rhodopirellula baltica SH 1 1794045 NP_868887.1 CDS RB9438 NC_005027.1 5067945 5069423 R best DB hits: BLAST: pir:T36423; probable large, multifunctional secreted protein -; E=4e-50 embl:CAB45032.1; (AL078635) large multi-functional; E=6e-45; large, multifunctional secreted protein complement(5067945..5069423) Rhodopirellula baltica SH 1 1796420 NP_868888.1 CDS RB9439 NC_005027.1 5069490 5073116 R best DB hits: BLAST: embl:CAB58265.1; (AL121849) multi-domain protein; E=6e-33 embl:CAB45032.1; (AL078635) large multi-functional; E=1e-32 pir:T36423; probable large, multifunctional secreted protein -; E=1e-06 PFAM: PF00034; Cytochrome c; E=0.023; large multi-functional protein complement(5069490..5073116) Rhodopirellula baltica SH 1 1796275 NP_868889.1 CDS RB9442 NC_005027.1 5073113 5074930 R hypothetical protein complement(5073113..5074930) Rhodopirellula baltica SH 1 1796207 NP_868890.1 CDS RB9445 NC_005027.1 5074872 5075621 D best DB hits: BLAST: embl:CAB89030.1; (AL353870) integral membrane protein.; E=6e-17; hypothetical protein 5074872..5075621 Rhodopirellula baltica SH 1 1795576 NP_868891.1 CDS RB9447 NC_005027.1 5075664 5076218 D best DB hits: BLAST: pir:S75593; hypothetical protein slr1340 - Synechocystis sp. (strain; E=3e-27 swissprot:P08457; STA_STRLA STREPTOTHRICIN ACETYLTRANSFERASE; E=2e-05 pir:JN0662; nourseothricin acetyltransferase (EC 2.3.1.-) -; E=3e-04 COG: slr1340; COG0454 Histone acetyltransferase HPA2 and related; E=3e-28 MTH1284; COG0456 Acetyltransferases; E=0.001 AF0521; COG0454 Histone acetyltransferase HPA2 and related; E=0.001 PFAM: PF00583; Acetyltransferase (GNAT) family; E=1.7e-20; hypothetical protein 5075664..5076218 Rhodopirellula baltica SH 1 1796087 NP_868892.1 CDS RB9448 NC_005027.1 5076267 5076614 D best DB hits: BLAST: pir:C82978; conserved hypothetical protein PA5333 [imported] -; E=1e-12 pir:S74932; hypothetical protein slr0686 - Synechocystis sp. (strain; E=1e-08 COG: PA5333; COG3296 Uncharacterized BCR; E=1e-13; hypothetical protein 5076267..5076614 Rhodopirellula baltica SH 1 1795698 NP_868893.1 CDS RB9450 NC_005027.1 5076581 5076739 D hypothetical protein 5076581..5076739 Rhodopirellula baltica SH 1 1791370 NP_868894.1 CDS RB9460 NC_005027.1 5078621 5078860 R best DB hits: BLAST: gb:AAF79368.1; AC007887_27 (AC007887) F15O4.40 [Arabidopsis; E=0.77; hypothetical protein complement(5078621..5078860) Rhodopirellula baltica SH 1 1795782 NP_868895.1 CDS RB9462 NC_005027.1 5078876 5079106 R hypothetical protein complement(5078876..5079106) Rhodopirellula baltica SH 1 1796482 NP_868896.1 CDS RB9463 NC_005027.1 5079098 5080984 D best DB hits: BLAST: pir:H69181; hypothetical protein MTH616 - Methanobacterium; E=4e-31 pir:H69125; hypothetical protein MTH210 - Methanobacterium; E=2e-30 gb:AAF35993.1; AC005836_5 (AC005836) 26S Protease Regulatory; E=0.42 COG: MTH616; COG0606 Predicted ATPases; E=4e-32 PFAM: PF00004; ATPase associated with variou; E=0.039; hypothetical protein 5079098..5080984 Rhodopirellula baltica SH 1 1797073 NP_868897.1 CDS RB9469 NC_005027.1 5081396 5082625 D best DB hits: PFAM: PF01040; UbiA prenyltransferase; E=0.14; hypothetical protein 5081396..5082625 Rhodopirellula baltica SH 1 1796438 NP_868898.1 CDS ppk NC_005027.1 5082460 5085018 D catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 5082460..5085018 Rhodopirellula baltica SH 1 1791366 NP_868899.1 CDS RB9472 NC_005027.1 5085031 5085393 D hypothetical protein 5085031..5085393 Rhodopirellula baltica SH 1 1795446 NP_868900.1 CDS RB9474 NC_005027.1 5085390 5087720 D signal peptide 5085390..5087720 Rhodopirellula baltica SH 1 1796227 NP_868901.1 CDS RB9477 NC_005027.1 5087717 5088817 D best DB hits: BLAST: pir:S74476; ABC-type transport protein slr1113 - Synechocystis sp.; E=2e-46 pir:H71008; probable ATP-binding transport protein - Pyrococcus; E=2e-41 pir:E75122; hypothetical protein PAB1845 - Pyrococcus abyssi (strain; E=2e-40 COG: slr1113; COG1131 ABC-type multidrug transport system, ATPase; E=2e-47 ybhF; COG1131 ABC-type multidrug transport system, ATPase component; E=1e-33 TM1403; COG1131 ABC-type multidrug transport system, ATPase; E=2e-33 PFAM: PF00005; ABC transporter; E=5e-40; ABC-type transport protein 5087717..5088817 Rhodopirellula baltica SH 1 1794092 NP_868902.1 CDS RB9478 NC_005027.1 5088814 5089818 D best DB hits: BLAST: pir:F81850; conserved hypothetical protein NMA1579 [imported] -; E=1e-66 pir:D81090; conserved hypothetical protein NMB1367 [imported] -; E=3e-66 pir:A82195; conserved hypothetical protein VC1488 [imported] -; E=1e-65 COG: NMB1367; COG1092 Predicted SAM-dependent methyltransferases; E=3e-67; methyltransferase 5088814..5089818 Rhodopirellula baltica SH 1 1792163 NP_868903.1 CDS RB9480 NC_005027.1 5089839 5090633 R hypothetical protein complement(5089839..5090633) Rhodopirellula baltica SH 1 1792598 NP_868904.1 CDS RB9481 NC_005027.1 5090691 5090858 R hypothetical protein complement(5090691..5090858) Rhodopirellula baltica SH 1 1794945 NP_868905.1 CDS RB9482 NC_005027.1 5090809 5092401 D best DB hits: BLAST: pir:G71008; hypothetical protein PH1365 - Pyrococcus horikoshii; E=0.58 pir:F75122; hypothetical protein PAB1844 - Pyrococcus abyssi (strain; E=0.72; hypothetical protein 5090809..5092401 Rhodopirellula baltica SH 1 1795680 NP_868906.1 CDS RB9484 NC_005027.1 5092452 5094011 R best DB hits: BLAST: gb:AAF87925.1; AF163841_2 (AF163841) unknown [Myxococcus xanthus]; E=9e-51 swissprot:Q50722; YY03_MYCTU HYPOTHETICAL 57.9 KDA PROTEIN RV3403C; E=0.031 PFAM: PF00070; Pyridine nucleotide-disulphide oxid; E=4.7e-05; hypothetical protein complement(5092452..5094011) Rhodopirellula baltica SH 1 1794994 NP_868907.1 CDS RB9485 NC_005027.1 5094035 5094190 R hypothetical protein complement(5094035..5094190) Rhodopirellula baltica SH 1 1797148 NP_868908.1 CDS RB9486 NC_005027.1 5094163 5094687 D PMID: 8384293 best DB hits: BLAST: gb:AAB87745.1; (U89914) hypothetical 16.1 kDa transcriptional; E=8e-10 pir:G69867; transcriptional regulator MarR family homolog ykvE -; E=6e-06 pir:A82692; transcriptional regulator MarR family XF1354 [imported] -; E=1e-05 COG: BS_ykvE; COG1846 Transcriptional regulators; E=6e-07 PFAM: PF01047; MarR family; E=3.1e-20; hypothetical protein 5094163..5094687 Rhodopirellula baltica SH 1 1797197 NP_868909.1 CDS RB9488 NC_005027.1 5094757 5096388 D PMID: 11549181 best DB hits: BLAST: gb:AAF82075.1; AF232751_3 (AF232751) unknown protein; E=1e-22 gb:AAB89642.1; (AE000991) conserved hypothetical protein; E=1e-10 gb:AAB89643.1; (AE000991) A. fulgidus predicted coding region; E=8e-05 COG: yeiH; COG2855 Uncharacterized membrane protein; E=2e-04 PFAM: PF00065; Neurotransmitter-gated ion-channel; E=0.36; hypothetical protein 5094757..5096388 Rhodopirellula baltica SH 1 1796460 NP_868910.1 CDS RB9491 NC_005027.1 5096385 5096651 D signal peptide 5096385..5096651 Rhodopirellula baltica SH 1 1796433 NP_868911.1 CDS RB9493 NC_005027.1 5096754 5097221 D best DB hits: BLAST: pir:G83613; probable acetyltransferase PA0249 [imported] -; E=7e-20 pir:S41381; hypothetical protein - Pseudomonas aeruginosa -----; E=5e-16 swissprot:P37664; YIAC_ECOLI HYPOTHETICAL 17.1 KDA PROTEIN IN; E=2e-13 COG: PA0249; COG0454 Histone acetyltransferase HPA2 and related; E=6e-21 Rv3420c; COG0456 Acetyltransferases; E=0.006 PFAM: PF00583; Acetyltransferase (GNAT) family; E=4.2e-21; acetyltransferase 5096754..5097221 Rhodopirellula baltica SH 1 1796042 NP_868912.1 CDS RB9494 NC_005027.1 5097275 5098132 R best DB hits: BLAST: pir:B83343; hypothetical protein PA2418 [imported] - Pseudomonas; E=2e-88 embl:CAC08479.1; (AL392189) possible chromosome condensation; E=8e-42 pir:B83239; conserved hypothetical protein PA3240 [imported] -; E=2e-38 COG: PA2418; COG1741 Uncharacterized BCR; E=2e-89 PFAM: PF02678; Uncharacterized BCR, YhhW family COG; E=6.7e-09; hypothetical protein complement(5097275..5098132) Rhodopirellula baltica SH 1 1796052 NP_868913.1 CDS RB9495 NC_005027.1 5098332 5098523 R hypothetical protein complement(5098332..5098523) Rhodopirellula baltica SH 1 1793520 NP_868914.1 CDS RB9496 NC_005027.1 5098535 5099059 D hypothetical protein 5098535..5099059 Rhodopirellula baltica SH 1 1793356 NP_868915.1 CDS arsA NC_005027.1 5099139 5100695 D PMID: 10336424 best DB hits: BLAST: gb:AAF04318.1; (AF065159) arylsulfatase [Bradyrhizobium; E=1e-59 gb:AAG58993.1; AE005611_3 (AE005611) arylsulfatase [Escherichia; E=5e-45 swissprot:P25549; ASLA_ECOLI ARYLSULFATASE (ARYL-SULFATE; E=5e-45 COG: aslA; COG3119 Arylsulfatase A and related enzymes; E=4e-46 yejM; COG3083 Predicted hydrolase of alkaline phosphatase; E=0.001 PFAM: PF00884; Sulfatase; E=5.8e-75; arylsulfatase 5099139..5100695 Rhodopirellula baltica SH 1 1793462 NP_868916.1 CDS moxR NC_005027.1 5100826 5101953 D PMID: 1657871 best DB hits: BLAST: pir:H82493; MoxR-related protein VCA0175 [imported] - Vibrio; E=1e-87 pir:G83261; conserved hypothetical protein PA3070 [imported] -; E=2e-87 pir:H70121; methanol dehydrogenase regulator (moxR) homolog - Lyme; E=3e-69 COG: VCA0175; COG0714 MoxR-like ATPases; E=9e-89 PFAM: PF01078; Magnesium chelatase, subunit Chl; E=6.9e-08; MoxR-related protein 5100826..5101953 Rhodopirellula baltica SH 1 1792721 NP_868917.1 CDS RB9500 NC_005027.1 5101960 5102925 D best DB hits: BLAST: pir:H83261; hypothetical protein PA3071 [imported] - Pseudomonas; E=2e-35 pir:G82493; conserved hypothetical protein VCA0174 [imported] -; E=6e-30 pir:D83106; hypothetical protein PA4323 [imported] - Pseudomonas; E=1e-11 COG: PA3071; COG1721 Uncharacterized ACR; E=2e-36 PFAM: PF01882; Protein of unknown function DUF58; E=2.4e-18; hypothetical protein 5101960..5102925 Rhodopirellula baltica SH 1 1791747 NP_868918.1 CDS RB9501 NC_005027.1 5102922 5103431 D hypothetical protein 5102922..5103431 Rhodopirellula baltica SH 1 1792603 NP_868919.1 CDS RB9502 NC_005027.1 5103356 5104462 D best DB hits: BLAST: pir:E82493; conserved hypothetical protein VCA0172 [imported] -; E=7e-49 pir:B83262; hypothetical protein PA3073 [imported] - Pseudomonas; E=3e-44 gb:AAD30858.1; AF116251_1 (AF116251) BatA [Bacteroides fragilis]; E=6e-23 COG: VCA0172; COG3035 Uncharacterized BCR; E=7e-50; hypothetical protein 5103356..5104462 Rhodopirellula baltica SH 1 1795085 NP_868920.1 CDS RB9504 NC_005027.1 5104459 5105412 D best DB hits: BLAST: pir:D82493; conserved hypothetical protein VCA0171 [imported] -; E=9e-11 pir:C83262; hypothetical protein PA3074 [imported] - Pseudomonas; E=4e-10 gb:AAD30859.1; AF116251_2 (AF116251) BatB [Bacteroides fragilis]; E=0.046 COG: VCA0171_1; COG3035 Uncharacterized BCR; E=2e-12; hypothetical protein 5104459..5105412 Rhodopirellula baltica SH 1 1793143 NP_868921.1 CDS RB9505 NC_005027.1 5105412 5106041 D best DB hits: BLAST: pir:D82493; conserved hypothetical protein VCA0171 [imported] -; E=4e-12 pir:C83262; hypothetical protein PA3074 [imported] - Pseudomonas; E=9e-06 pir:S74853; hypothetical protein sll0837 - Synechocystis sp. (strain; E=0.059 COG: VCA0171_2; COG0457 TPR-repeat-containing proteins; E=2e-10 PFAM: PF00515; TPR Domain; E=1.3e-05; hypothetical protein 5105412..5106041 Rhodopirellula baltica SH 1 1790408 NP_868922.1 CDS RB9506 NC_005027.1 5106038 5107351 D best DB hits: BLAST: pir:D83262; hypothetical protein PA3075 [imported] - Pseudomonas; E=1e-18; hypothetical protein 5106038..5107351 Rhodopirellula baltica SH 1 1792569 NP_868923.1 CDS RB9508 NC_005027.1 5107377 5108834 R best DB hits: BLAST: pir:S77346; hypothetical protein slr1841 - Synechocystis sp. (strain; E=0.64; hypothetical protein complement(5107377..5108834) Rhodopirellula baltica SH 1 1789945 NP_868924.1 CDS RB9512 NC_005027.1 5108992 5109963 D signal peptide 5108992..5109963 Rhodopirellula baltica SH 1 1790453 NP_868925.1 CDS RB9513 NC_005027.1 5109960 5111885 D PMID: 1501644 best DB hits: BLAST: gb:AAF70456.1; AF221952_1 (AF221952) mu-protocadherin [Rattus; E=5e-08 gb:AAF45927.1; (AE003430) CG15570 gene product [Drosophila; E=3e-07 embl:CAC16087.1; (AJ289697) zona pellucida protein 1 [Gallus; E=5e-07 COG: VC1711; COG1032 Fe-S oxidoreductases family 2; E=6e-04; mu-protocadherin- cell-suface protein 5109960..5111885 Rhodopirellula baltica SH 1 1792157 NP_868926.1 CDS RB9518 NC_005027.1 5111918 5112856 D signal peptide 5111918..5112856 Rhodopirellula baltica SH 1 1792786 NP_868927.1 CDS RB9520 NC_005027.1 5112897 5114495 R PMID: 12024217; hypothetical protein complement(5112897..5114495) Rhodopirellula baltica SH 1 1796599 NP_868928.1 CDS RB9522 NC_005027.1 5114655 5115068 D best DB hits: BLAST: swissprot:P37684; YIAW_ECOLI HYPOTHETICAL 12.4 KD PROTEIN IN; E=0.006 swissprot:P32108; YIBI_ECOLI HYPOTHETICAL 13.9 KD PROTEIN IN; E=0.019 gb:AAG58742.1; AE005586_7 (AE005586) orf, hypothetical protein; E=0.019; hypothetical protein 5114655..5115068 Rhodopirellula baltica SH 1 1797182 NP_868929.1 CDS RB9526 NC_005027.1 5115178 5116371 D best DB hits: BLAST: pir:H82507; conserved hypothetical protein VCA0047 [imported] -; E=1e-42 swissprot:P32107; YIBH_ECOLI HYPOTHETICAL 42.0 KD PROTEIN IN; E=2e-27 swissprot:P37683; YIAV_ECOLI HYPOTHETICAL 41.8 KD PROTEIN IN; E=2e-23 COG: VCA0047; COG1566 Multidrug resistance efflux pump; E=1e-43 ybhG; COG0845 Membrane-fusion protein; E=2e-08 PA1237; COG1566 Multidrug resistance efflux pump; E=5e-08 PFAM: PF00529; HlyD family secretion protein; E=3.2e-10; multidrug resistance efflux pump 5115178..5116371 Rhodopirellula baltica SH 1 1796412 NP_868930.1 CDS RB9527 NC_005027.1 5116407 5117846 D signal peptide 5116407..5117846 Rhodopirellula baltica SH 1 1792631 NP_868931.1 CDS RB9528 NC_005027.1 5117274 5117864 R hypothetical protein complement(5117274..5117864) Rhodopirellula baltica SH 1 1796446 NP_868932.1 CDS RB9529 NC_005027.1 5117956 5118297 D hypothetical protein 5117956..5118297 Rhodopirellula baltica SH 1 1796552 NP_868933.1 CDS aslA NC_005027.1 5118294 5119910 R PMID: 10336424 best DB hits: BLAST: swissprot:P25549; ASLA_ECOLI ARYLSULFATASE (ARYL-SULFATE; E=4e-62 gb:AAG58993.1; AE005611_3 (AE005611) arylsulfatase [Escherichia; E=6e-62 gb:AAC32036.1; (M90498) arylsulfatase [Escherichia coli]; E=1e-54 COG: aslA; COG3119 Arylsulfatase A and related enzymes; E=4e-63 PFAM: PF00884; Sulfatase; E=3.6e-42; arylsulfatase complement(5118294..5119910) Rhodopirellula baltica SH 1 1794581 NP_868934.1 CDS RB9532 NC_005027.1 5119929 5120243 D hypothetical protein 5119929..5120243 Rhodopirellula baltica SH 1 1795948 NP_868935.1 CDS cls NC_005027.1 5120240 5121715 D PMID: 9370333 PMID: 1663113 best DB hits: BLAST: gb:AAB60128.1; (U24202) cardiolipin synthase [Escherichia coli]; E=2e-68 swissprot:P31071; CLS_ECOLI CARDIOLIPIN SYNTHETASE (CARDIOLIPIN; E=4e-68 gb:AAB60144.1; (U24204) cardiolipin synthase [Escherichia coli]; E=7e-68 COG: cls; COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiol; E=3e-69 VC1670; COG1502; E=2e-64 PFAM: PF00614; Phospholipase D. Active site motif; E=0.016; cardiolipin synthase 5120240..5121715 Rhodopirellula baltica SH 1 1795463 NP_868936.1 CDS ykbA NC_005027.1 5121750 5123204 D PMID: http://us.expasy.org/cgi-bin/niceprot.pl?Q9WVR6 best DB hits: BLAST: pir:B69855; amino acid permease homolog ykbA - Bacillus subtilis; E=4e-13 swissprot:Q9WVR6; LAT2_RAT LARGE NEUTRAL AMINO ACIDS TRANSPORTER; E=2e-11 embl:CAB69072.1; (Y19022) LAT2 protein [Mus musculus]; E=3e-11 COG: BS_ykbA; COG0531 Amino acid transporters; E=4e-14; amino acid permease 5121750..5123204 Rhodopirellula baltica SH 1 1793501 NP_868937.1 CDS RB9536 NC_005027.1 5123259 5123963 R best DB hits: BLAST: pir:S76625; hypothetical protein - Synechocystis sp. (strain PCC; E=1e-13 pir:A83553; hypothetical protein PA0742 [imported] - Pseudomonas; E=3e-06 swissprot:P06549; LCTB_BACCA LCTB PROTEIN ----- pir: A25748; E=0.007 COG: PA0742; COG1226 Kef-type K+ transport systems, predicted NAD-binding; E=3e-07; hypothetical protein complement(5123259..5123963) Rhodopirellula baltica SH 1 1796379 NP_868938.1 CDS RB9540 NC_005027.1 5124085 5124243 R hypothetical protein complement(5124085..5124243) Rhodopirellula baltica SH 1 1794027 NP_868939.1 CDS mexE NC_005027.1 5124210 5125622 D PMID: 8196548 best DB hits: BLAST: pir:E83335; RND multidrug efflux membrane fusion protein MexE; E=9e-33 pir:T30829; hypothetical protein mexE - Pseudomonas aeruginosa; E=1e-31 embl:CAC14594.1; (AJ252200) membrane fusion protein; E=1e-21 COG: PA2493; COG0845 Membrane-fusion protein; E=9e-34 PFAM: PF00364; Biotin-requiring enzyme; E=0.31 PF00529; HlyD family secretion protein; E=5.5e-13; RND multidrug efflux membrane fusion protein MexE precursor 5124210..5125622 Rhodopirellula baltica SH 1 1793546 NP_868940.1 CDS mexF NC_005027.1 5125626 5128739 D best DB hits: BLAST: pir:F83335; RND multidrug efflux transporter MexF PA2494 [imported] -; E=0.0 pir:T30830; hypothetical protein mexF - Pseudomonas aeruginosa -----; E=0.0 pir:T43024; ceoB protein - Burkholderia cepacia ----- gb:; E=0.0 COG: PA2494; COG0841 Cation/multidrug efflux pump; E=0.0 PFAM: PF00873; AcrB/AcrD/AcrF family; E=0; RND multidrug efflux transporter MexF 5125626..5128739 Rhodopirellula baltica SH 1 1792872 NP_868941.1 CDS RB9543 NC_005027.1 5128796 5129950 R best DB hits: BLAST: embl:CAB83202.1; (AJ277117) membrane protein; E=6e-21 pir:S47693; hypothetical 38.5K protein (ftsy-nika intergenic region); E=2e-18 gb:AAG58583.1; AE005570_10 (AE005570) orf, hypothetical protein; E=3e-18 COG: yhhT; COG0628 Predicted permease; E=2e-19 PFAM: PF01594; Domain of unknown function DUF20; E=5e-05; membrane protein- a permease complement(5128796..5129950) Rhodopirellula baltica SH 1 1790617 NP_868942.1 CDS RB9544 NC_005027.1 5129925 5130128 D hypothetical protein 5129925..5130128 Rhodopirellula baltica SH 1 1794719 NP_868943.1 CDS RB9546 NC_005027.1 5130161 5130991 R best DB hits: BLAST: pir:F72424; hypothetical protein - Thermotoga maritima (strain MSB8); E=8e-27 gb:AAK03442.1; (AE006173) unknown [Pasteurella multocida]; E=8e-09 swissprot:P10478; XYNZ_CLOTM ENDO-1,4-BETA-XYLANASE Z PRECURSOR; E=1e-07 COG: TM0033; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; E=7e-28 PFAM: PF00561; alpha/beta hydrolase fold; E=0.033 PF01738; Dienelactone hydrolase; E=0.00013 PF02230; Phospholipase/Carboxylesterase; E=0.012; a hydrolase complement(5130161..5130991) Rhodopirellula baltica SH 1 1795608 NP_868944.1 CDS RB9547 NC_005027.1 5131031 5131201 R hypothetical protein complement(5131031..5131201) Rhodopirellula baltica SH 1 1796355 NP_868945.1 CDS RB9549 NC_005027.1 5131295 5134444 D PMID: 8244397 PMID: 8325651 PMID: 20233298 best DB hits: BLAST: gb:AAA37880.1; (L07921) iduronate sulfatase [Mus musculus]; E=6e-34 gb:AAF30402.1; AF109924_1 (AF109924) sulfatase 1 precursor [Helix; E=9e-33 gb:AAF49287.1; (AE003522) CG7402 gene product [Drosophila; E=3e-31 COG: PA0031; COG3119 Arylsulfatase A and related enzymes; E=2e-28 PFAM: PF00884; Sulfatase; E=1.7e-25; iduronate-sulfatase (partial) and sulfatase 1 precursor 5131295..5134444 Rhodopirellula baltica SH 1 1795535 NP_868946.1 CDS RB9550 NC_005027.1 5134564 5135298 R PMID: 11823852; hypothetical protein complement(5134564..5135298) Rhodopirellula baltica SH 1 1796918 NP_868947.1 CDS arsA NC_005027.1 5135358 5137139 R PMID: 9464374 best DB hits: BLAST: gb:AAD51849.1; AF178758_5 (AF178758) ArsA [Sinorhizobium sp. As4]; E=1e-162 swissprot:O50593; ARSA_ACIMU ARSENICAL PUMP-DRIVING ATPASE; E=1e-148 swissprot:P52145; ARA2_ECOLI ARSENICAL PUMP-DRIVING ATPASE; E=1e-147 COG: MJ1142; COG0003 Arsenite transporting ATPase; E=6e-22 PA1462; COG1192 ATPases involved in chromosome partitioning; E=4e-04 PFAM: PF01583; Adenylylsulfate kinase; E=0.42 PF00142; 4Fe-4S iron sulfur cluster bi; E=0.31 PF01695; IstB-like ATP binding protein; E=0.025; ArsA-catalytic subunit of arsenic oxyanion-translocating ATPase complement(5135358..5137139) Rhodopirellula baltica SH 1 1795681 NP_868948.1 CDS arsD NC_005027.1 5137202 5137570 R PMID: 9464374 best DB hits: BLAST: ddbj:BAA24821.1; (AB004659) ArsD [Acidiphilium multivorum]; E=7e-21 swissprot:P46003; ARD1_ECOLI ARSENICAL RESISTANCE OPERON; E=2e-20 gb:AAF89639.1; AF168737_2 (AF168737) ArsD [Klebsiella oxytoca]; E=3e-20; ArsD repressor protein complement(5137202..5137570) Rhodopirellula baltica SH 1 1790552 NP_868949.1 CDS RB9556 NC_005027.1 5137602 5137772 R hypothetical protein complement(5137602..5137772) Rhodopirellula baltica SH 1 1792854 NP_868950.1 CDS RB9557 NC_005027.1 5137783 5140833 R hypothetical protein complement(5137783..5140833) Rhodopirellula baltica SH 1 1790414 NP_868951.1 CDS sigE NC_005027.1 5140686 5141429 D PMID: 9139909 best DB hits: BLAST: gb:AAC45219.1; (U87308) extracytoplasmic function alternative; E=7e-05 pir:H70507; probable sigE protein - Mycobacterium tuberculosis; E=1e-04 gb:AAC45221.1; (U87307) extracytoplasmic function alternative; E=4e-04 COG: Rv1221; COG1595 DNA-directed RNA polymerase specialized sigma; E=1e-05 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=3.2e-06; extracytoplasmic function alternative sigma factor 5140686..5141429 Rhodopirellula baltica SH 1 1794736 NP_868952.1 CDS RB9563 NC_005027.1 5141426 5142799 D hypothetical protein 5141426..5142799 Rhodopirellula baltica SH 1 1794270 NP_868953.1 CDS RB9565 NC_005027.1 5142812 5143795 R best DB hits: BLAST: embl:CAA96346.1; (Z71679) ORF YNR064c [Saccharomyces cerevisiae]; E=3e-59 embl:CAB56721.1; (AL121600) hydrolase [Streptomyces; E=1e-53 embl:CAB56691.1; (AL121596) hydrolase [Streptomyces; E=6e-30 COG: YNR064c; COG0596 Predicted hydrolases or acyltransferases; E=3e-60 Rv2296; COG0596 Predicted hydrolases or acyltransferases (alpha/beta; E=1e-15 BS_yugF; COG0596 Predicted hydrolases or acyltransferases; E=2e-15 PFAM: PF00561; alpha/beta hydrolase fold; E=7.1e-28; hydrolase complement(5142812..5143795) Rhodopirellula baltica SH 1 1792616 NP_868954.1 CDS RB9566 NC_005027.1 5143784 5143894 D signal peptide 5143784..5143894 Rhodopirellula baltica SH 1 1792871 NP_868955.1 CDS RB9567 NC_005027.1 5143904 5144374 R best DB hits: BLAST: pir:C82971; conserved hypothetical protein PA5395 [imported] -; E=1e-46 pir:S77029; hypothetical protein sll0781 - Synechocystis sp. (strain; E=1e-42 embl:CAC14336.1; (AL445945) conserved hypothetical protein; E=3e-36; hypothetical protein complement(5143904..5144374) Rhodopirellula baltica SH 1 1796684 NP_868956.1 CDS mip NC_005027.1 5144424 5145056 R PMID: 8007818 best DB hits: BLAST: gb:AAB31024.1; (S71704) Mip=24 kda macrophage infectivity; E=3e-32 pir:D83354; hypothetical protein PA2331 [imported] - Pseudomonas; E=8e-14 pir:B81134; macrophage infectivity potentiator-related protein; E=1e-13 COG: PA2331; COG2128 Uncharacterized ACR; E=7e-15 PA0565; COG0599 Uncharacterized ACR, homolog of; E=0.002 PFAM: PF02627; Carboxymuconolactone decarboxylase; E=1e-06; hypothetical protein complement(5144424..5145056) Rhodopirellula baltica SH 1 1796159 NP_868957.1 CDS hyfR NC_005027.1 5145205 5146848 D best DB hits: BLAST: swissprot:P71229; HYFR_ECOLI HYDROGENASE-4 TRANSCRIPTIONAL; E=1e-83 pir:B65025; hypothetical protein b2491 - Escherichia coli (strain; E=1e-83 ddbj:BAA16380.1; (D90878) FORMATE HYDROGENLYASE TRANSCRIPTIONAL; E=1e-83 COG: hyfR_2; COG1221 NtrC family transcriptional regulators, ATPase; E=2e-77 hydG; COG2204 AAA superfamily ATPases with N-terminal receiver; E=4e-66 aq_1792_2; COG1221 NtrC family transcriptional regulators, ATPase; E=8e-66 PFAM: PF01590; GAF domain; E=9.9e-11 PF00158; Sigma-54 interaction domain; E=2.1e-138; hydrogenase-4 transcriptional activator 5145205..5146848 Rhodopirellula baltica SH 1 1793400 NP_868958.1 CDS RB9572 NC_005027.1 5146973 5149477 D PMID: 7574579 best DB hits: BLAST: pir:F75417; L-sorbosone dehydrogenase - Deinococcus radiodurans; E=8e-06 swissprot:Q44091; SNDH_ACELI L-SORBOSONE DEHYDROGENASE (SNDH); E=0.20 COG: DR1257; COG2133 Glucose/sorbosone dehydrogenases; E=8e-07 PFAM: PF01436; NHL repeat; E=0.028; L-sorbosone dehydrogenase 5146973..5149477 Rhodopirellula baltica SH 1 1791062 NP_868959.1 CDS fabG NC_005027.1 5149549 5150355 R best DB hits: BLAST: swissprot:Q9X248; FABG_THEMA 3-OXOACYL-[ACYL-CARRIER PROTEIN]; E=7e-33 pir:E81695; 3-oxoacyl-(acyl carrier protein) reductase TC0508; E=3e-29 swissprot:P38004; FABG_CHLTR 3-OXOACYL-[ACYL-CARRIER PROTEIN]; E=2e-28 COG: TM1724; COG1028 Dehydrogenases with different specificities (related; E=7e-34 CPn0296; COG1028 Dehydrogenases with different specificities; E=3e-28 BH2491; COG1028 Dehydrogenases with different specificities (related; E=4e-27 PFAM: PF00106; short chain dehydrogenase; E=3.1e-58 PF00678; Short chain dehydrogenase/reduct; E=3.5e-06; 3-oxoacyl-ACP reductase complement(5149549..5150355) Rhodopirellula baltica SH 1 1793322 NP_868960.1 CDS RB9577 NC_005027.1 5150346 5150501 R hypothetical protein complement(5150346..5150501) Rhodopirellula baltica SH 1 1789952 NP_868961.1 CDS RB9578 NC_005027.1 5150392 5150592 D hypothetical protein 5150392..5150592 Rhodopirellula baltica SH 1 1796009 NP_868962.1 CDS RB9581 NC_005027.1 5150535 5150921 R best DB hits: BLAST: swissprot:P37486; YYBR_BACSU HYPOTHETICAL 14.7 KDA PROTEIN IN; E=3e-25 ddbj:BAA19363.1; (AB001488) FUNCTION UNKNOWN, SIMILAR PRODUCT IN; E=3e-25 swissprot:P96673; YDEP_BACSU HYPOTHETICAL 15.2 KDA PROTEIN IN; E=3e-25 COG: BS_yybR; COG1733 Predicted transcriptional regulators; E=3e-26 PFAM: PF01638; Protein of unknown function DUF24; E=1.9e-44; cinnamoyl ester hydrolase- a transcriptional regulator complement(5150535..5150921) Rhodopirellula baltica SH 1 1796675 NP_868963.1 CDS RB9584 NC_005027.1 5151075 5152061 D best DB hits: BLAST: embl:CAA04767.1; (AJ001445) ripening-induced protein [Fragaria; E=6e-31 pir:T10824; auxin-induced protein (clone MII-3) - mung bean -----; E=3e-29 swissprot:Q9ZUC1; QORL_ARATH QUINONE OXIDOREDUCTASE-LIKE PROTEIN; E=9e-27 COG: PA1137; COG0604 NADPH:quinone reductase and related Zn-dependent; E=2e-24 PA5427; COG1064 Zn-dependent alcohol dehydrogenases; E=4e-10 VNG1821G; COG0604 NADPH:quinone reductase and related Zn-dependent; E=5e-10 PFAM: PF00107; Zinc-binding dehydrogenases; E=2.8e-68; ripening-induced protein- Zn-containing oxidoreductase 5151075..5152061 Rhodopirellula baltica SH 1 1791223 NP_868964.1 CDS RB9585 NC_005027.1 5152143 5153129 D best DB hits: BLAST: pir:E83496; hypothetical protein PA1186 [imported] - Pseudomonas; E=8e-50 embl:CAB76875.1; (AL159139) hypothetical protein SCL6.10; E=2e-12 swissprot:P71557; Y953_MYCTU HYPOTHETICAL 30.9 KDA PROTEIN RV0953C; E=7e-08 COG: PA1186; COG2141 Coenzyme F420-dependent N5,N10-methylene; E=8e-51 PFAM: PF00296; Bacterial luciferase; E=0.86; coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase 5152143..5153129 Rhodopirellula baltica SH 1 1792231 NP_868965.1 CDS RB9586 NC_005027.1 5153129 5153929 D best DB hits: BLAST: ddbj:BAB03618.1; (AP002522) contains ESTs; E=3e-20 pir:S42651; hypothetical protein - rape ----- embl: CAB58175.1; E=1e-19 pir:T02520; hypothetical protein F13M22.4 - Arabidopsis thaliana; E=2e-18 COG: Rv0068; COG1028 Dehydrogenases with different specificities (related; E=8e-17 VNG0479G; COG1028 Dehydrogenases with different specificities; E=1e-15 XF2716; COG1028 Dehydrogenases with different specificities (related; E=1e-15 PFAM: PF00106; short chain dehydrogenase; E=4.1e-22; oxidoreductase 5153129..5153929 Rhodopirellula baltica SH 1 1792004 NP_868966.1 CDS RB9587 NC_005027.1 5153993 5155975 D PMID: 11932238; hypothetical protein 5153993..5155975 Rhodopirellula baltica SH 1 1790547 NP_868967.1 CDS RB9588 NC_005027.1 5156015 5156821 R best DB hits: BLAST: embl:CAB62700.1; (AL133422) hypothetical protein SCM1.42c; E=7e-34 gb:AAF12648.1; AE001826_117 (AE001826) hypothetical protein; E=4e-33; hypothetical protein complement(5156015..5156821) Rhodopirellula baltica SH 1 1792601 NP_868968.1 CDS RB9591 NC_005027.1 5156987 5157931 D best DB hits: BLAST: pir:T36867; hypothetical protein SCI51.04 - Streptomyces coelicolor; E=3e-50 pir:T36868; hypothetical protein SCI51.05c - Streptomyces coelicolor; E=7e-07 pir:D83072; conserved hypothetical protein PA4584 [imported] -; E=2e-05; hypothetical protein 5156987..5157931 Rhodopirellula baltica SH 1 1794728 NP_868969.1 CDS RB9592 NC_005027.1 5157928 5158737 D best DB hits: BLAST: pir:T36868; hypothetical protein SCI51.05c - Streptomyces coelicolor; E=6e-54 swissprot:Q60312; Y002_METJA HYPOTHETICAL PROTEIN MJ0002 -----; E=1e-13 pir:T36867; hypothetical protein SCI51.04 - Streptomyces coelicolor; E=9e-07; hypothetical protein 5157928..5158737 Rhodopirellula baltica SH 1 1792075 NP_868970.1 CDS butB NC_005027.1 5158697 5161153 D PMID: 7522196 best DB hits: BLAST: swissprot:P35824; SLAP_BACCI S-LAYER RELATED PROTEIN PRECURSOR; E=4e-04 PFAM: PF02368; Bacterial Ig-like domain (group 2; E=0.013; S-layer related protein [precursor] 5158697..5161153 Rhodopirellula baltica SH 1 1795844 NP_868971.1 CDS RB9598 NC_005027.1 5161160 5162500 D hypothetical protein 5161160..5162500 Rhodopirellula baltica SH 1 1791703 NP_868972.1 CDS RB9599 NC_005027.1 5161286 5162521 R hypothetical protein complement(5161286..5162521) Rhodopirellula baltica SH 1 1794225 NP_868973.1 CDS RB9600 NC_005027.1 5162500 5164209 D best DB hits: BLAST: pir:A75582; serine proteinase, subtilase - Deinococcus; E=0.064 COG: DRA0283; COG1404 Subtilisin-like serine proteases; E=0.006; serine proteinase 5162500..5164209 Rhodopirellula baltica SH 1 1796075 NP_868974.1 CDS RB9604 NC_005027.1 5164206 5167013 D PMID: 7557402 best DB hits: BLAST: swissprot:Q00808; HET1_PODAN VEGETATIBLE INCOMPATIBILITY PROTEIN; E=3e-21 pir:T41075; hypothetical WD-repeat protein - fission yeast; E=9e-17 embl:CAA04998.1; (AJ001774) vanadium chloroperoxidase [Anabaena; E=2e-16 COG: YCR084c; COG2319 WD40 repeat protein; E=9e-14 PFAM: PF00400; WD domain, G-beta repeat; E=0.058; vegetatible incompatibility protein HET-E1 5164206..5167013 Rhodopirellula baltica SH 1 1791035 NP_868975.1 CDS RB9606 NC_005027.1 5167135 5168976 D PMID: 8335689 best DB hits: BLAST: embl:CAA84826.1; (Z35768) ORF YBL007c [Saccharomyces cerevisiae]; E=0.67; cytoskeleton assembly control protein SLA1- secreted or membrane associated protein 5167135..5168976 Rhodopirellula baltica SH 1 1792263 NP_868976.1 CDS acrA1 NC_005027.1 5169123 5170628 D best DB hits: BLAST: pir:F70974; probable acrA1 protein - Mycobacterium tuberculosis; E=4e-15 gb:AAG31130.1; AF299336_7 (AF299336) MxcG [Stigmatella aurantiaca]; E=6e-12 pir:T37054; hypothetical protein SCJ21.05 - Streptomyces coelicolor; E=7e-10 COG: Rv3391_1; COG0451 Nucleoside-diphosphate-sugar epimerases; E=4e-16 PA4078_2; COG3320 Epimerase domains of multifunctional non-ribosomal; E=2e-04 PFAM: PF01073; 3-beta hydroxysteroid dehydro; E=0.7; AcrA1 protein 5169123..5170628 Rhodopirellula baltica SH 1 1796146 NP_868977.1 CDS RB9611 NC_005027.1 5170773 5172827 R best DB hits: BLAST: pir:C81187; ABC transporter ATP-binding protein NMB0549 [imported]; E=3e-97 pir:C81916; probable ABC transporter ATP-binding protein NMA0729; E=8e-96 gb:AAG55261.1; AE005269_5 (AE005269) ATP-binding; E=7e-94 COG: BS_yknY; COG1136 ABC-type (unclassified) transport system, ATPase; E=1e-56 NMB0549_2; COG0577 Predicted permease; E=5e-46 PFAM: PF00735; Cell division protein; E=0.7 PF00005; ABC transporter; E=3e-64 PF02687; Predicted permease; E=0.2; ABC transporter ATP-binding protein complement(5170773..5172827) Rhodopirellula baltica SH 1 1796635 NP_868978.1 CDS syrD NC_005027.1 5172824 5174467 R PMID: 8231810 best DB hits: BLAST: swissprot:P33951; SYRD_PSESY ATP-BINDING PROTEIN SYRD -----; E=8e-65 pir:G83345; pyoverdine biosynthesis protein PvdE PA2397 [imported] -; E=8e-65 pir:S54001; pyoverdine synthetase E - Pseudomonas aeruginosa -----; E=9e-64 COG: PA2397; COG1132 ABC-type multidrug/protein/lipid transport system,; E=8e-66 APE1253; COG1136 ABC-type (unclassified) transport system, ATPase; E=2e-09 XF1081; COG1132 ABC-type multidrug/protein/lipid transport system,; E=2e-07 PFAM: PF00664; ABC transporter transmembrane; E=0.25 PF00470; RecF protein; E=0.13 PF02223; Thymidylate kinase; E=0.0054; ATP-binding protein syrD-ATP binding protein of ABC-type transporter complement(5172824..5174467) Rhodopirellula baltica SH 1 1795843 NP_868979.1 CDS RB9613 NC_005027.1 5174489 5174650 R hypothetical protein complement(5174489..5174650) Rhodopirellula baltica SH 1 1796389 NP_868980.1 CDS sur1 NC_005027.1 5174663 5175448 R best DB hits: BLAST: swissprot:Q10323; YD6B_SCHPO HYPOTHETICAL 42.2 KD PROTEIN; E=1e-28 pir:T38533; similar to S. cerevisiae sur1 protein - fission yeast; E=4e-27 gb:AAB68308.1; (U39205) Sur1p [Saccharomyces cerevisiae]; E=8e-26; surface protein Sur1 complement(5174663..5175448) Rhodopirellula baltica SH 1 1790357 NP_868981.1 CDS mtfB NC_005027.1 5175471 5176667 R PMID: 8162191 PMID: 7536735 best DB hits: BLAST: pir:I76776; Mannosyltransferase (EC 5.-.-.-) B - Escherichia coli; E=2e-26 gb:AAF04384.1; AF189151_7 (AF189151) WbdB; mannosyl transferase B; E=2e-26 gb:AAC38771.1; (AF010182) glycosyltransferase WbpY [Pseudomonas; E=3e-21 COG: PA5448; COG0438 Predicted glycosyltransferases; E=3e-22 PFAM: PF00534; Glycosyl transferases group 1; E=2.1e-24; mannosyltransferase complement(5175471..5176667) Rhodopirellula baltica SH 1 1795455 NP_868982.1 CDS RB9619 NC_005027.1 5176761 5177939 R hypothetical protein complement(5176761..5177939) Rhodopirellula baltica SH 1 1791524 NP_868983.1 CDS RB9620 NC_005027.1 5177920 5179596 R hypothetical protein complement(5177920..5179596) Rhodopirellula baltica SH 1 1792150 NP_868984.1 CDS RB9623 NC_005027.1 5179518 5180189 R best DB hits: BLAST: embl:CAA69119.1; (Y07786) sugar transferase [Vibrio cholerae]; E=3e-13 ddbj:BAA33603.1; (AB012956) probable glycosyl transferase [Vibrio; E=3e-13 pir:T44330; glycosyl transferase homolog [imported] - Vibrio; E=3e-12 COG: BH3661; COG0463 Glycosyltransferases involved in cell wall; E=7e-13 RP339; COG0463 Glycosyltransferases involved in cell wall biogenesis; E=5e-10 HI0868; COG0463 Glycosyltransferases involved in cell wall; E=4e-09 PFAM: PF00535; Glycosyl transferase; E=1.9e-44; sugar transferase- a glycosyl transferase complement(5179518..5180189) Rhodopirellula baltica SH 1 1791956 NP_868985.1 CDS RB9624 NC_005027.1 5180186 5181259 R hypothetical protein complement(5180186..5181259) Rhodopirellula baltica SH 1 1796039 NP_868986.1 CDS RB9625 NC_005027.1 5181277 5181714 R hypothetical protein complement(5181277..5181714) Rhodopirellula baltica SH 1 1794730 NP_868987.1 CDS RB9626 NC_005027.1 5181753 5181959 D hypothetical protein 5181753..5181959 Rhodopirellula baltica SH 1 1789999 NP_868988.1 CDS mtfA NC_005027.1 5181911 5183374 D best DB hits: BLAST: pir:S74764; hypothetical protein slr1063 - Synechocystis sp. (strain; E=2e-10 gb:AAB91182.1; (AE001103) mannosyltransferase A (mtfA); E=3e-10 pir:S77338; LPS glycosyltransferase icsA - Synechocystis sp. (strain; E=0.004 COG: AF0045; COG0438 Predicted glycosyltransferases; E=3e-11 PFAM: PF00534; Glycosyl transferases group 1; E=9.2e-10; mannosyltransferase 5181911..5183374 Rhodopirellula baltica SH 1 1793933 NP_868989.1 CDS desC NC_005027.1 5183393 5184385 R PMID: 9106218 best DB hits: BLAST: gb:AAB61353.1; (U36390) delta-9 desaturase [Synechococcus sp. PCC; E=2e-39 pir:S75765; stearoyl-CoA desaturase (EC 1.14.99.5) 1 - Synechocystis; E=1e-36 pir:S57643; stearoyl-CoA desaturase (EC 1.14.99.5) - Synechococcus; E=2e-36 COG: sll0541; COG1398 Fatty-acid desaturase; E=1e-37 PFAM: PF01069; Fatty acid desaturase; E=7.5e-32; delta-9 desaturase complement(5183393..5184385) Rhodopirellula baltica SH 1 1793053 NP_868990.1 CDS RB9631 NC_005027.1 5184595 5185926 R best DB hits: BLAST: gb:AAF15891.2; AF204805_1 (AF204805) NosA [Nostoc sp. GSV224]; E=0.19 PFAM: PF00668; Condensation domain; E=0.00055; hypothetical protein complement(5184595..5185926) Rhodopirellula baltica SH 1 1791142 NP_868991.1 CDS RB9635 NC_005027.1 5185973 5187031 R hypothetical protein complement(5185973..5187031) Rhodopirellula baltica SH 1 1792686 NP_868992.1 CDS RB9637 NC_005027.1 5187058 5188608 D best DB hits: BLAST: pir:B75096; glycosyl transferase PAB0772 - Pyrococcus abyssi (strain; E=8e-23 gb:AAC44786.1; (U70729) MigA [Pseudomonas aeruginosa]; E=2e-22 pir:B83557; probable glycosyl transferase PA0705 [imported] -; E=2e-22 COG: PAB0772; COG0463 Glycosyltransferases involved in cell wall; E=7e-24 RP339; COG0463 Glycosyltransferases involved in cell wall biogenesis; E=2e-17 PA5000; COG0463 Glycosyltransferases involved in cell wall; E=3e-17 PFAM: PF00535; Glycosyl transferase; E=3.7e-41; glycosyl transferase 5187058..5188608 Rhodopirellula baltica SH 1 1796329 NP_868993.1 CDS RB9640 NC_005027.1 5188617 5189891 R best DB hits: BLAST: embl:CAC11705.1; (AL445064) hypothetical protein [Thermoplasma; E=5e-14 pir:S75560; ceramide glucosyltransferase - Synechocystis sp. (strain; E=2e-11 ddbj:BAA09451.1; (D50840) ceramide glucosyltransferase [Homo; E=0.004 COG: Ta0565; COG1215 Glycosyltransferases, probably involved in cell wall; E=5e-15 slr0813; COG1215 Glycosyltransferases, probably involved in cell; E=2e-12 PFAM: PF00535; Glycosyl transferase; E=0.014; ceramide glucosyltransferase complement(5188617..5189891) Rhodopirellula baltica SH 1 1792198 NP_868994.1 CDS RB9641 NC_005027.1 5189877 5190098 D hypothetical protein 5189877..5190098 Rhodopirellula baltica SH 1 1796572 NP_868995.1 CDS RB9642 NC_005027.1 5190092 5190214 D hypothetical protein 5190092..5190214 Rhodopirellula baltica SH 1 1794540 NP_868996.1 CDS RB9643 NC_005027.1 5190264 5191526 D best DB hits: BLAST: gb:AAK03081.1; (AE006139) unknown [Pasteurella multocida]; E=8e-11 gb:AAG55260.1; AE005269_4 (AE005269) membrane protein; E=5e-10 pir:F64826; probable membrane protein b0878 - Escherichia coli; E=1e-09 COG: ybjY; COG0845 Membrane-fusion protein; E=1e-10 VC1410; COG1566 Multidrug resistance efflux pump; E=6e-06 NMB0548; COG0845 Membrane-fusion protein; E=1e-05 PFAM: PF00529; HlyD family secretion protein; E=7.9e-05; hypothetical protein 5190264..5191526 Rhodopirellula baltica SH 1 1796059 NP_868997.1 CDS aprF NC_005027.1 5191659 5193572 R PMID: 11222613 best DB hits: BLAST: gb:AAF87592.1; AF286062_5 (AF286062) AprF [Pseudomonas; E=0.29 gb:AAF01330.1; (AF188365) outer membrane protein [Pseudomonas; E=0.64 PFAM: PF02321; Outer membrane efflux protein; E=2.3e-05; AprF- outer membrane efflux protein or secreted alkaline phosphatase complement(5191659..5193572) Rhodopirellula baltica SH 1 1796171 NP_868998.1 CDS RB9648 NC_005027.1 5193858 5195090 R best DB hits: BLAST: embl:CAC11705.1; (AL445064) hypothetical protein [Thermoplasma; E=9e-09 pir:S75560; ceramide glucosyltransferase - Synechocystis sp. (strain; E=3e-08 ddbj:BAA09451.1; (D50840) ceramide glucosyltransferase [Homo; E=7e-05 COG: Ta0565; COG1215 Glycosyltransferases, probably involved in cell wall; E=8e-10 slr0813; COG1215 Glycosyltransferases, probably involved in cell; E=3e-09 sll1004; COG0463 Glycosyltransferases involved in cell wall; E=4e-05 PFAM: PF00535; Glycosyl transferase; E=2e-07; ceramide glucosyltransferase complement(5193858..5195090) Rhodopirellula baltica SH 1 1796358 NP_868999.1 CDS RB9650 NC_005027.1 5195258 5196670 R PMID: 8020961 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=5e-38 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=4e-37 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=4e-37 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=6e-29 TM1703; COG1368 Phosphoglycerol transferase and related proteins,; E=2e-04 VNG1337C; COG3119 Arylsulfatase A and related enzymes; E=8e-04 PFAM: PF00884; Sulfatase; E=5.7e-53; N-acetylgalactosamine 6-sulfatase (GALNS) complement(5195258..5196670) Rhodopirellula baltica SH 1 1794358 NP_869000.1 CDS RB9651 NC_005027.1 5196643 5198277 R PMID: 97078679 PMID: 8662838 PMID: 10464298 PMID: 8918804 best DB hits: BLAST: embl:CAA67214.1; (X98625) sialic acid-specific 9-O-acetylesterase; E=3e-37 gb:AAB07813.1; (U40408) sialic-acid O-acetylesterase [Mus; E=6e-37 pir:T46250; hypothetical protein DKFZp761A051.1 - human (fragment); E=1e-34; sialic acid-specific 9-O-acetylesterase complement(5196643..5198277) Rhodopirellula baltica SH 1 1791225 NP_869001.1 CDS RB9653 NC_005027.1 5198245 5198721 D hypothetical protein 5198245..5198721 Rhodopirellula baltica SH 1 1794949 NP_869002.1 CDS pta NC_005027.1 5198833 5200932 D catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase 5198833..5200932 Rhodopirellula baltica SH 1 1797146 NP_869003.1 CDS ackA NC_005027.1 5200863 5202038 D PMID: 10074080 best DB hits: BLAST: swissprot:O52594; ACKA_CLOTM ACETATE KINASE (ACETOKINASE) -----; E=7e-71 swissprot:Q9WYB1; ACKA_THEMA ACETATE KINASE (ACETOKINASE) -----; E=2e-68 swissprot:P38502; ACKA_METTE ACETATE KINASE (ACETOKINASE) -----; E=5e-66 COG: TM0274; COG0282 Acetate kinase; E=2e-69 PFAM: PF00871; Acetokinase; E=3.3e-06; acetate kinase 5200863..5202038 Rhodopirellula baltica SH 1 1796441 NP_869004.1 CDS RB9657 NC_005027.1 5202179 5203258 D best DB hits: BLAST: embl:CAC18708.1; (AL451182) aldoketoreductase; E=9e-18 embl:CAA74709.1; (Y14332) dTDP-4-keto-L-6-deoxy-hexose; E=6e-17 ddbj:BAB04730.1; (AP001510) oxidoreductase [Bacillus halodurans]; E=2e-15 COG: BH1011; COG0667 Predicted oxidoreductases (related to aryl-alcohol; E=2e-16 Ta0027; COG0656 Aldo/keto reductases, related to diketogulonate; E=3e-12 BS_iolS; COG0667 Predicted oxidoreductases (related to aryl-alcohol; E=4e-12 PFAM: PF00248; Aldo/keto reductase; E=1.6e-13; dTDP-4-keto-L-6-deoxy-hexose 2,3-reductase- a NADP-dependent oxidoreductase 5202179..5203258 Rhodopirellula baltica SH 1 1793717 NP_869005.1 CDS RB9658 NC_005027.1 5203305 5203856 R best DB hits: BLAST: pir:D82155; hypothetical protein VC1816 [imported] - Vibrio cholerae; E=1e-16 ddbj:BAA89380.1; (AB025342) ORF6 [Moritella marina]; E=2e-15 pir:G75556; hypothetical protein - Deinococcus radiodurans (strain; E=2e-13 COG: DR0127; COG0666 Ankyrin repeat proteins; E=2e-14; hypothetical protein complement(5203305..5203856) Rhodopirellula baltica SH 1 1792899 NP_869006.1 CDS RB9659 NC_005027.1 5203888 5204784 R best DB hits: BLAST: gb:AAG58178.1; AE005533_11 (AE005533) orf, hypothetical protein; E=1e-59 swissprot:P24197; YGID_ECOLI HYPOTHETICAL 29.9 KD PROTEIN IN; E=6e-59 pir:S22362; hypothetical protein C - Escherichia coli ----- gb:; E=1e-54 COG: ygiD; COG3384 Uncharacterized protein; E=6e-60; hypothetical protein complement(5203888..5204784) Rhodopirellula baltica SH 1 1790874 NP_869007.1 CDS RB9660 NC_005027.1 5204810 5205271 R best DB hits: BLAST: ddbj:BAB05804.1; (AP001514) BH2085~unknown [Bacillus halodurans]; E=5e-19; membrane associated or secreted protein complement(5204810..5205271) Rhodopirellula baltica SH 1 1793324 NP_869008.1 CDS araC NC_005027.1 5205359 5206723 D best DB hits: BLAST: pir:T35901; probable araC family transcriptional regulator -; E=1e-17 swissprot:Q03320; ARAL_STRAT ARAC-LIKE TRANSCRIPTION; E=2e-16 swissprot:P35319; ARAL_STRLI ARAC-LIKE TRANSCRIPTION; E=2e-15 COG: ykgD; COG2207 AraC-type DNA-binding domain-containing proteins; E=2e-12 VCA1018_1; COG2169 Adenosine deaminase; E=3e-05 VCA1074; COG2207 AraC-type DNA-binding domain-containing proteins; E=3e-05 PFAM: PF00440; Bacterial regulatory proteins, tetR; E=0.37 PF00165; Bacterial regulatory helix-turn-heli; E=3.5e-25 PF01047; MarR family; E=0.25; AraC family transcriptional regulator 5205359..5206723 Rhodopirellula baltica SH 1 1792355 NP_869009.1 CDS RB9664 NC_005027.1 5206898 5209192 D PMID: 8830057 best DB hits: BLAST: gb:AAD05198.1; (U43163) inter-alpha-trypsin inhibitor family; E=3e-24 ddbj:BAA07602.1; (D38595) inter-alpha-trypsin inhibitor family; E=4e-24 ddbj:BAA07536.1; (D38535) PK-120 precursor [Homo sapiens]; E=8e-24 COG: sll0103; COG2304 Protein containing von Willebrand factor (vWF) type; E=1e-04 PFAM: PF02138; Beige/BEACH domain; E=0.089 PF00092; von Willebrand factor type A domain; E=0.084; inter-alpha-trypsin inhibitor domain-containing protein 5206898..5209192 Rhodopirellula baltica SH 1 1796205 NP_869010.1 CDS RB9666 NC_005027.1 5209189 5209872 D best DB hits: PFAM: PF01694; Rhomboid family; E=0.038; hypothetical protein 5209189..5209872 Rhodopirellula baltica SH 1 1794438 NP_869011.1 CDS RB9668 NC_005027.1 5209887 5210069 R hypothetical protein complement(5209887..5210069) Rhodopirellula baltica SH 1 1796395 NP_869012.1 CDS RB9669 NC_005027.1 5210092 5210265 R hypothetical protein complement(5210092..5210265) Rhodopirellula baltica SH 1 1790827 NP_869013.1 CDS RB9670 NC_005027.1 5210290 5211006 R best DB hits: BLAST: pir:E81971; hypothetical protein NMA0532 [imported] - Neisseria; E=0.079 pir:G81862; conserved hypothetical protein NMA1675 [imported] -; E=0.079 pir:F81882; hypothetical protein NMA1155 [imported] - Neisseria; E=0.17; hypothetical protein complement(5210290..5211006) Rhodopirellula baltica SH 1 1790994 NP_869014.1 CDS RB9673 NC_005027.1 5211126 5211281 D hypothetical protein 5211126..5211281 Rhodopirellula baltica SH 1 1792227 NP_869015.1 CDS pepX NC_005027.1 5211283 5213163 D catalyzes the removal of N-terminal dipeptides when proline is the penultimate residue; x-prolyl-dipeptidyl aminopeptidase 5211283..5213163 Rhodopirellula baltica SH 1 1792056 NP_869016.1 CDS RB9676 NC_005027.1 5213215 5214558 R signal peptide complement(5213215..5214558) Rhodopirellula baltica SH 1 1795743 NP_869017.1 CDS RB9679 NC_005027.1 5214695 5216233 D best DB hits: BLAST: gb:AAG54525.1; AE005198_6 (AE005198) Z0256 gene product; E=2e-16 pir:D83634; hypothetical protein PA0079 [imported] - Pseudomonas; E=3e-16 pir:E82499; hypothetical protein VCA0114 [imported] - Vibrio; E=2e-14; hypothetical protein 5214695..5216233 Rhodopirellula baltica SH 1 1795943 NP_869018.1 CDS RB9684 NC_005027.1 5216230 5216877 D best DB hits: BLAST: pir:F83350; hypothetical protein PA2362 [imported] - Pseudomonas; E=3e-05 pir:G83437; hypothetical protein PA1668 [imported] - Pseudomonas; E=0.006; hypothetical protein 5216230..5216877 Rhodopirellula baltica SH 1 1794967 NP_869019.1 CDS RB9685 NC_005027.1 5216911 5218644 D best DB hits: BLAST: embl:CAC05884.1; (AL391754) penicillin-binding protein; E=0.22; hypothetical protein 5216911..5218644 Rhodopirellula baltica SH 1 1792007 NP_869020.1 CDS RB9687 NC_005027.1 5218795 5219868 D best DB hits: BLAST: pir:G83634; hypothetical protein PA0082 [imported] - Pseudomonas; E=1e-34 pir:D83350; hypothetical protein PA2360 [imported] - Pseudomonas; E=3e-10; hypothetical protein 5218795..5219868 Rhodopirellula baltica SH 1 1796609 NP_869021.1 CDS RB9689 NC_005027.1 5219934 5220461 D best DB hits: BLAST: pir:H83634; conserved hypothetical protein PA0083 [imported] -; E=2e-54 gb:AAB92577.1; (AF037441) 19.5 kDa protein [Edwardsiella; E=7e-29 pir:A83351; conserved hypothetical protein PA2365 [imported] -; E=8e-28; hypothetical protein 5219934..5220461 Rhodopirellula baltica SH 1 1794609 NP_869022.1 CDS RB9690 NC_005027.1 5220509 5222011 D best DB hits: BLAST: pir:A83635; conserved hypothetical protein PA0084 [imported] -; E=0.0 gb:AAB92576.1; (AF037441) 54.5 kDa protein [Edwardsiella; E=1e-110 pir:B83351; conserved hypothetical protein PA2366 [imported] -; E=1e-109; hypothetical protein 5220509..5222011 Rhodopirellula baltica SH 1 1790063 NP_869023.1 CDS RB9692 NC_005027.1 5222065 5222544 D best DB hits: BLAST: pir:A83349; hypothetical protein PA2367 [imported] - Pseudomonas; E=9e-13 gb:AAB92575.1; (AF037441) 17.8 kDa protein [Edwardsiella; E=0.006 COG: PA2367; COG3157 Hemolysin-coregulated protein (uncharacterized); E=9e-14; hypothetical protein 5222065..5222544 Rhodopirellula baltica SH 1 1789939 NP_869024.1 CDS RB9693 NC_005027.1 5222556 5223110 D best DB hits: BLAST: pir:D83635; hypothetical protein PA0087 [imported] - Pseudomonas; E=6e-06 gb:AAB92574.1; (AF037441) 18.8 kDa protein [Edwardsiella; E=1e-04; hypothetical protein 5222556..5223110 Rhodopirellula baltica SH 1 1790135 NP_869025.1 CDS RB9696 NC_005027.1 5223290 5225191 D best DB hits: BLAST: pir:E83635; hypothetical protein PA0088 [imported] - Pseudomonas; E=1e-139 pir:C83349; hypothetical protein PA2369 [imported] - Pseudomonas; E=2e-61 pir:A82499; hypothetical protein VCA0110 [imported] - Vibrio; E=3e-40; hypothetical protein 5223290..5225191 Rhodopirellula baltica SH 1 1796579 NP_869026.1 CDS RB9698 NC_005027.1 5225279 5226328 D best DB hits: BLAST: pir:F83635; hypothetical protein PA0089 [imported] - Pseudomonas; E=4e-31 pir:D83349; hypothetical protein PA2370 [imported] - Pseudomonas; E=1e-05 gb:AAG54528.1; AE005198_9 (AE005198) Z0259 gene product; E=0.001; hypothetical protein 5225279..5226328 Rhodopirellula baltica SH 1 1790459 NP_869027.1 CDS RB9699 NC_005027.1 5226252 5228345 D best DB hits: BLAST: pir:H83635; conserved hypothetical protein PA0091 [imported] -; E=1e-104 pir:D83633; conserved hypothetical protein PA0095 [imported] -; E=1e-101 pir:G83310; conserved hypothetical protein PA2685 [imported] -; E=5e-97; hypothetical protein 5226252..5228345 Rhodopirellula baltica SH 1 1796177 NP_869028.1 CDS RB9700 NC_005027.1 5228428 5229342 D hypothetical protein 5228428..5229342 Rhodopirellula baltica SH 1 1795368 NP_869029.1 CDS RB9702 NC_005027.1 5229342 5229632 D best DB hits: BLAST: pir:H83542; hypothetical protein PA0824 [imported] - Pseudomonas; E=0.042 pir:F82478; hypothetical protein VCA0284 [imported] - Vibrio; E=0.18 gb:AAG54900.1; AE005236_1 (AE005236) Z0705 gene product; E=0.36; hypothetical protein 5229342..5229632 Rhodopirellula baltica SH 1 1793473 NP_869030.1 CDS RB9704 NC_005027.1 5229636 5234027 D hypothetical protein 5229636..5234027 Rhodopirellula baltica SH 1 1793245 NP_869031.1 CDS RB9707 NC_005027.1 5234044 5234844 D hypothetical protein 5234044..5234844 Rhodopirellula baltica SH 1 1796648 NP_869032.1 CDS RB9710 NC_005027.1 5235132 5240027 R best DB hits: PFAM: PF02869; Eukaryotic initiation factor 5A hypu; E=0.64 PF00092; von Willebrand factor type A domain; E=0.00092; hypothetical protein complement(5235132..5240027) Rhodopirellula baltica SH 1 1793970 NP_869033.1 CDS RB9713 NC_005027.1 5240049 5243297 R best DB hits: BLAST: pir:T36423; probable large, multifunctional secreted protein -; E=8e-23 embl:CAB45032.1; (AL078635) large multi-functional protein; E=2e-22 pir:C75617; probable oxidoreductase - Deinococcus radiodurans; E=0.40 PFAM: PF01436; NHL repeat; E=0.1; large, multifunctional secreted protein complement(5240049..5243297) Rhodopirellula baltica SH 1 1796017 NP_869034.1 CDS RB9717 NC_005027.1 5243612 5243833 R hypothetical protein complement(5243612..5243833) Rhodopirellula baltica SH 1 1796381 NP_869035.1 CDS RB9720 NC_005027.1 5243888 5244346 D hypothetical protein 5243888..5244346 Rhodopirellula baltica SH 1 1795781 NP_869036.1 CDS RB9722 NC_005027.1 5244321 5246186 R best DB hits: BLAST: swissprot:O67293; YC50_AQUAE HYPOTHETICAL PROTEIN AQ_1250 -----; E=2e-09 swissprot:Q9Z729; Y877_CHLPN HYPOTHETICAL PROTEIN CPN0877CP0992; E=2e-07 swissprot:O26373; Y273_METTH HYPOTHETICAL PROTEIN MTH273 -----; E=4e-07 COG: aq_1250; COG1881 Phospholipid-binding protein; E=2e-10; phospholipid-binding protein complement(5244321..5246186) Rhodopirellula baltica SH 1 1797158 NP_869037.1 CDS RB9724 NC_005027.1 5246183 5246920 R signal peptide complement(5246183..5246920) Rhodopirellula baltica SH 1 1791459 NP_869038.1 CDS RB9725 NC_005027.1 5246921 5247988 R hypothetical protein complement(5246921..5247988) Rhodopirellula baltica SH 1 1792041 NP_869039.1 CDS rfaY NC_005027.1 5247985 5248503 R PMID: 8052622 best DB hits: BLAST: swissprot:P46358; RFAY_XANCP PROBABLE RNA POLYMERASE SIGMA FACTOR; E=5e-05 swissprot:P37978; CNRH_ALCEU RNA POLYMERASE SIGMA FACTOR CNRH; E=9e-04 pir:C69826; RNA polymerase ECF-type sigma factor homolog yhdM -; E=0.001 COG: BS_yhdM; COG1595 DNA-directed RNA polymerase specialized sigma; E=1e-04 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=4.8e-07; RNA polymerase sigma factor rfaY complement(5247985..5248503) Rhodopirellula baltica SH 1 1791336 NP_869040.1 CDS RB9731 NC_005027.1 5248458 5248703 D hypothetical protein 5248458..5248703 Rhodopirellula baltica SH 1 1793647 NP_869041.1 CDS RB9732 NC_005027.1 5248700 5250529 D best DB hits: BLAST: pir:B82698; gluconolactonase precursor XF1297 [imported] - Xylella; E=4e-05 embl:CAB59581.1; (AL132662) possible gluconolactonase precursor; E=0.028 pir:B83340; hypothetical protein PA2451 [imported] - Pseudomonas; E=0.036 COG: XF1297; COG3386 Uncharacterized protein; E=4e-06 PA2451; COG2382 Enterochelin esterase and related enzymes; E=0.003; gluconolactonase 5248700..5250529 Rhodopirellula baltica SH 1 1794651 NP_869042.1 CDS RB9736 NC_005027.1 5250678 5250788 R hypothetical protein complement(5250678..5250788) Rhodopirellula baltica SH 1 1794658 NP_869043.1 CDS RB9737 NC_005027.1 5250930 5251292 D hypothetical protein 5250930..5251292 Rhodopirellula baltica SH 1 1794959 NP_869044.1 CDS RB9739 NC_005027.1 5251375 5251554 D hypothetical protein 5251375..5251554 Rhodopirellula baltica SH 1 1791559 NP_869045.1 CDS RB9740 NC_005027.1 5251409 5251600 R hypothetical protein complement(5251409..5251600) Rhodopirellula baltica SH 1 1796554 NP_869046.1 CDS RB9742 NC_005027.1 5251548 5252279 R hypothetical protein complement(5251548..5252279) Rhodopirellula baltica SH 1 1796417 NP_869047.1 CDS RB9744 NC_005027.1 5252292 5252417 R hypothetical protein complement(5252292..5252417) Rhodopirellula baltica SH 1 1797160 NP_869048.1 CDS pknB NC_005027.1 5252442 5254412 D best DB hits: BLAST: ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=1e-33 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=1e-32 pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=1e-32 COG: BH2504_1; COG0515 Serine/threonine protein kinases; E=1e-34 PFAM: PF00069; Protein kinase domain; E=2.6e-53; serine/threonine protein kinase 5252442..5254412 Rhodopirellula baltica SH 1 1792339 NP_869049.1 CDS RB9747 NC_005027.1 5254530 5254748 D hypothetical protein 5254530..5254748 Rhodopirellula baltica SH 1 1791991 NP_869050.1 CDS RB9748 NC_005027.1 5254745 5255845 D catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 5254745..5255845 Rhodopirellula baltica SH 1 1791612 NP_869051.1 CDS RB9751 NC_005027.1 5255923 5256858 D signal peptide 5255923..5256858 Rhodopirellula baltica SH 1 1796738 NP_869052.1 CDS RB9752 NC_005027.1 5256855 5257259 R hypothetical protein complement(5256855..5257259) Rhodopirellula baltica SH 1 1791190 NP_869053.1 CDS arsA NC_005027.1 5257623 5259401 R PMID: 7910580 PMID: 1572648 best DB hits: BLAST: pdb:1E2S; P Chain P, Crystal Structure Of An Arylsulfatase A; E=5e-34 pdb:1AUK; Human Arylsulfatase A; E=6e-34 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=7e-34 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=9e-32 TM1703; COG1368 Phosphoglycerol transferase and related proteins,; E=0.008 PFAM: PF00884; Sulfatase; E=4.8e-55; arylsulfatase complement(5257623..5259401) Rhodopirellula baltica SH 1 1796692 NP_869054.1 CDS RB9757 NC_005027.1 5259412 5259519 R hypothetical protein complement(5259412..5259519) Rhodopirellula baltica SH 1 1792237 NP_869055.1 CDS RB9758 NC_005027.1 5259536 5259928 R hypothetical protein complement(5259536..5259928) Rhodopirellula baltica SH 1 1796386 NP_869056.1 CDS RB9761 NC_005027.1 5260004 5260363 D signal peptide 5260004..5260363 Rhodopirellula baltica SH 1 1794335 NP_869057.1 CDS RB9765 NC_005027.1 5260845 5263346 R PMID: 11544236 best DB hits: BLAST: gb:AAK02042.1; AF261825_11 (AF261825) hypothetical protein; E=2e-97 PFAM: PF02662; Methyl-viologen-reducing hydrogenase; E=0.091; subtilisin proteinase-like protein complement(5260845..5263346) Rhodopirellula baltica SH 1 1795319 NP_869058.1 CDS RB9766 NC_005027.1 5263361 5264383 R PMID: 11544236 best DB hits: BLAST: gb:AAK02043.1; AF261825_12 (AF261825) ATPase [Salmonella; E=3e-67 swissprot:P55530; Y4KL_RHISN HYPOTHETICAL 37.6 KD AAA-FAMILY; E=2e-41 gb:AAA64864.1; (U23723) orf300 [Escherichia coli]; E=9e-32 COG: HP1069; COG0465 ATP-dependent Zn proteases; E=4e-24 AF0477; COG0464 ATPases of the AAA+ class; E=3e-23 Cj1116c; COG0465 ATP-dependent Zn proteases; E=5e-22 PFAM: PF00406; Adenylate kinase; E=0.57 PF00071; Ras family; E=0.09 PF01202; Shikimate kinase; E=0.028; ATPase complement(5263361..5264383) Rhodopirellula baltica SH 1 1790079 NP_869059.1 CDS RB9767 NC_005027.1 5264348 5264641 D hypothetical protein 5264348..5264641 Rhodopirellula baltica SH 1 1796217 NP_869060.1 CDS RB9768 NC_005027.1 5264812 5264970 R hypothetical protein complement(5264812..5264970) Rhodopirellula baltica SH 1 1791374 NP_869061.1 CDS RB9769 NC_005027.1 5264970 5265335 R best DB hits: BLAST: pir:F83457; hypothetical protein PA1506 [imported] - Pseudomonas; E=9e-13 COG: PA1506; COG0394 Protein-tyrosine-phosphatase; E=9e-14 PFAM: PF01451; Low molecular weight phosphotyrosine; E=0.00019; phosphotyrosine protein phosphatase complement(5264970..5265335) Rhodopirellula baltica SH 1 1795671 NP_869062.1 CDS RB9771 NC_005027.1 5265332 5265928 R best DB hits: BLAST: embl:CAB76298.1; (AL158057) hypothetical protein SC10G8.25c.; E=8e-33 pir:A82207; conserved hypothetical protein VC1377 [imported] -; E=2e-12 pir:E83447; hypothetical protein PA1575 [imported] - Pseudomonas; E=5e-10 PFAM: PF00929; Exonuclease; E=1.8e-09; exonuclease complement(5265332..5265928) Rhodopirellula baltica SH 1 1796080 NP_869063.1 CDS RB9772 NC_005027.1 5265889 5266926 D PMID: 11759840; hypothetical protein 5265889..5266926 Rhodopirellula baltica SH 1 1795221 NP_869064.1 CDS RB9774 NC_005027.1 5267010 5267189 R hypothetical protein complement(5267010..5267189) Rhodopirellula baltica SH 1 1793915 NP_869065.1 CDS RB9779 NC_005027.1 5267553 5268920 D hypothetical protein 5267553..5268920 Rhodopirellula baltica SH 1 1795617 NP_869066.1 CDS RB9782 NC_005027.1 5268914 5269594 R signal peptide complement(5268914..5269594) Rhodopirellula baltica SH 1 1791934 NP_869067.1 CDS RB9784 NC_005027.1 5269555 5270166 R hypothetical protein complement(5269555..5270166) Rhodopirellula baltica SH 1 1790417 NP_869068.1 CDS RB9786 NC_005027.1 5270205 5270645 R hypothetical protein complement(5270205..5270645) Rhodopirellula baltica SH 1 1791638 NP_869069.1 CDS RB9787 NC_005027.1 5270719 5270904 R hypothetical protein complement(5270719..5270904) Rhodopirellula baltica SH 1 1790133 NP_869070.1 CDS RB9788 NC_005027.1 5270809 5271042 D hypothetical protein 5270809..5271042 Rhodopirellula baltica SH 1 1791030 NP_869071.1 CDS RB9790 NC_005027.1 5271138 5271476 R PMID: 2307677 best DB hits: BLAST: swissprot:P32084; YHIT_SYNP7 HYPOTHETICAL 12.4 KD HIT-LIKE PROTEIN; E=5e-34 pir:A35350; protein kinase C inhibitor - bovine; E=8e-34 gb:AAA18398.1; (U09407) protein kinase C inhibitor; E=8e-34 COG: slr1234; COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and; E=6e-33 ycfF; COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other; E=9e-26 XF1810; COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and; E=1e-21 PFAM: PF01230; HIT family; E=6e-59; protein kinase C inhibitor complement(5271138..5271476) Rhodopirellula baltica SH 1 1795720 NP_869072.1 CDS radC NC_005027.1 5271583 5272542 D PMID: 1741263 best DB hits: BLAST: ddbj:BAB06751.1; (AP001517) DNA repair protein [Bacillus; E=6e-32 swissprot:Q02170; RADC_BACSU DNA REPAIR PROTEIN RADC HOMOLOG; E=9e-32 swissprot:Q9X1P3; RADC_THEMA DNA REPAIR PROTEIN RADC HOMOLOG; E=1e-30 COG: BH3032; COG2003 DNA repair proteins; E=5e-33; DNA repair protein 5271583..5272542 Rhodopirellula baltica SH 1 1792948 NP_869073.1 CDS RB9792 NC_005027.1 5272603 5272740 D hypothetical protein 5272603..5272740 Rhodopirellula baltica SH 1 1791594 NP_869074.1 CDS RB9793 NC_005027.1 5272850 5273041 R hypothetical protein complement(5272850..5273041) Rhodopirellula baltica SH 1 1794924 NP_869075.1 CDS glnB NC_005027.1 5273274 5273591 R PMID: 7590157 PMID: 9733647 best DB hits: BLAST: swissprot:Q10960; GLNB_MYCTU NITROGEN REGULATORY PROTEIN P-II; E=5e-16 swissprot:O30794; GLNB_NOSPU NITROGEN REGULATORY PROTEIN P-II (PII; E=4e-15 swissprot:P80016; GLNB_SYNP7 NITROGEN REGULATORY PROTEIN P-II (PII; E=5e-15 COG: Rv2919c; COG0347 Nitrogen regulatory protein PII; E=5e-17 PFAM: PF00543; Nitrogen regulatory protein P-II; E=1.2e-10; nitrogen regulatory protein P-II complement(5273274..5273591) Rhodopirellula baltica SH 1 1796336 NP_869076.1 CDS asd NC_005027.1 5273623 5274642 R best DB hits: BLAST: swissprot:O67716; DHAS_AQUAE ASPARTATE-SEMIALDEHYDE DEHYDROGENASE; E=1e-78 swissprot:Q04797; DHAS_BACSU ASPARTATE-SEMIALDEHYDE DEHYDROGENASE; E=4e-78 pir:D46665; aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) -; E=9e-78 COG: aq_1866; COG0136 Aspartate-semialdehyde dehydrogenase; E=1e-79 PFAM: PF01118; Semialdehyde dehydrogenase, N; E=9.5e-36 PF02774; Semialdehyde dehydrogenase, d; E=5.2e-65; aspartate-semialdehyde dehydrogenase complement(5273623..5274642) Rhodopirellula baltica SH 1 1796322 NP_869077.1 CDS RB9797 NC_005027.1 5274691 5275002 R hypothetical protein complement(5274691..5275002) Rhodopirellula baltica SH 1 1796558 NP_869078.1 CDS RB9798 NC_005027.1 5275172 5276314 R hypothetical protein complement(5275172..5276314) Rhodopirellula baltica SH 1 1793131 NP_869079.1 CDS RB9800 NC_005027.1 5276364 5276618 R hypothetical protein complement(5276364..5276618) Rhodopirellula baltica SH 1 1795479 NP_869080.1 CDS RB9801 NC_005027.1 5276520 5276741 D hypothetical protein 5276520..5276741 Rhodopirellula baltica SH 1 1796413 NP_869081.1 CDS RB9805 NC_005027.1 5276839 5280519 D PMID: 8426613 best DB hits: BLAST: gb:AAA70381.1; (L05069) circumsporozoite protein [Plasmodium; E=0.15 pir:A41156; circumsporozoite protein - Plasmodium vivax (isolate; E=0.35 embl:CAB58111.1; (AL121806) prediction=(method:''genefinder'',; E=0.48; circumsporozoite protein- membrane associated protein 5276839..5280519 Rhodopirellula baltica SH 1 1793548 NP_869082.1 CDS RB9806 NC_005027.1 5280590 5281087 D signal peptide 5280590..5281087 Rhodopirellula baltica SH 1 1795865 NP_869083.1 CDS comM NC_005027.1 5281208 5282749 D PMID: 9457884 best DB hits: BLAST: pir:S75721; hypothetical protein slr0904 - Synechocystis sp. (strain; E=1e-117 pir:G72368; comM protein - Thermotoga maritima (strain MSB8) -----; E=1e-113 pir:C75370; Mg(2+) chelatase - Deinococcus; E=1e-111 COG: slr0904; COG0606 Predicted ATPases; E=1e-118 BH3051; COG1067 Predicted ATP-dependent protease; ATPase domain; E=7e-06 MTH556; COG1239 Mg-chelatase subunit ChlI; E=5e-04 PFAM: PF01078; Magnesium chelatase, subunit; E=1.2e-10 PF01202; Shikimate kinase; E=0.29 PF01695; IstB-like ATP binding protein; E=0.57; comM protein 5281208..5282749 Rhodopirellula baltica SH 1 1792217 NP_869084.1 CDS RB9809 NC_005027.1 5282685 5283128 R hypothetical protein complement(5282685..5283128) Rhodopirellula baltica SH 1 1793937 NP_869085.1 CDS RB9810 NC_005027.1 5283122 5284438 D best DB hits: BLAST: gb:AAD38020.1; AF148127_1 (AF148127) transposase [Porphyromonas; E=2e-13 ddbj:BAA83477.1; (AB009361) transposase [Porphyromonas; E=3e-13 ddbj:BAA92234.1; (AB031551) transposase [Bacillus subtilis]; E=4e-10 COG: BH0691; COG3385 Predicted transposase; E=4e-10 PFAM: PF01609; Transposase (IS4 family); E=6.2e-08; transposase 5283122..5284438 Rhodopirellula baltica SH 1 1790514 NP_869086.1 CDS RB9811 NC_005027.1 5284365 5284673 D hypothetical protein 5284365..5284673 Rhodopirellula baltica SH 1 1791808 NP_869087.1 CDS RB9813 NC_005027.1 5284638 5285123 R best DB hits: BLAST: pir:T00198; vp80 protein - Leucania separata nuclear polyhedrosis; E=0.39; hypothetical protein complement(5284638..5285123) Rhodopirellula baltica SH 1 1793891 NP_869088.1 CDS RB9817 NC_005027.1 5285340 5288765 R hypothetical protein complement(5285340..5288765) Rhodopirellula baltica SH 1 1792100 NP_869089.1 CDS RB9821 NC_005027.1 5288732 5289274 R best DB hits: BLAST: pir:B82065; conserved hypothetical protein VC2524 [imported] -; E=9e-28 embl:CAC12689.1; (AJ272115) hypothetical protein [Thauera; E=6e-26 pir:B83087; conserved hypothetical protein PA4458 [imported] -; E=7e-26 COG: VC2524; COG1778 Uncharacterized proteins of HAD superfamily,; E=8e-29 APE0766; COG0561 Predicted hydrolases of the HAD superfamily; E=6e-05; hypothetical protein complement(5288732..5289274) Rhodopirellula baltica SH 1 1796401 NP_869090.1 CDS RB9823 NC_005027.1 5289276 5290535 R best DB hits: BLAST: swissprot:O67500; YF46_AQUAE HYPOTHETICAL PROTEIN AQ_1546 -----; E=3e-47 swissprot:P45313; YRBH_HAEIN HYPOTHETICAL PROTEIN HI1678 -----; E=2e-46 gb:AAK02609.1; (AE006087) KpsF [Pasteurella multocida]; E=3e-43 COG: aq_1546_1; COG0794 Predicted sugar phosphate isomerase involved in; E=7e-37 APE1838; COG0517 CBS domains; E=2e-08 PFAM: PF01380; SIS domain; E=1.1e-28 PF00571; CBS domain; E=0.059; hypothetical protein complement(5289276..5290535) Rhodopirellula baltica SH 1 1794381 NP_869091.1 CDS RB9826 NC_005027.1 5290549 5291328 R best DB hits: BLAST: pir:G83105; hypothetical protein PA4318 [imported] - Pseudomonas; E=2e-12 ddbj:BAB04453.1; (AP001509) BH0734~unknown conserved protein; E=3e-04 pir:S74573; hypothetical protein slr0254 - Synechocystis sp. (strain; E=4e-04 COG: PA4318; COG1714 Uncharacterized membrane protein/domain; E=2e-13; hypothetical protein complement(5290549..5291328) Rhodopirellula baltica SH 1 1796385 NP_869092.1 CDS RB9828 NC_005027.1 5291466 5293130 D best DB hits: BLAST: gb:AAK02765.1; (AE006104) unknown [Pasteurella multocida]; E=0.006 gb:AAD41078.1; AF141204_1 (AF141204) Nramp2 [Arabidopsis thaliana]; E=0.014 gb:AAG52643.1; AC079677_7 (AC079677) stress response protein; E=0.014 COG: NMB1426; COG1914 Mn2+ and Fe2+ transporters of the NRAMP family; E=0.002 BS_ycsG; COG0591 Na+/proline, Na+/panthothenate symporters and; E=0.008; transmembrane Mn(2+) transporter 5291466..5293130 Rhodopirellula baltica SH 1 1796573 NP_869093.1 CDS RB9830 NC_005027.1 5293111 5293341 R hypothetical protein complement(5293111..5293341) Rhodopirellula baltica SH 1 1795208 NP_869094.1 CDS RB9832 NC_005027.1 5293371 5294813 R best DB hits: BLAST: pir:E71082; probable phospho-sugar mutase 2 - Pyrococcus horikoshii; E=1e-60 pir:H75104; phosphomannomutase (pmm) PAB0819 - Pyrococcus abyssi; E=7e-58 gb:AAB90779.1; (AE001073) phosphomannomutase (pmm) [Archaeoglobus; E=5e-53 COG: PH0923; COG1109 Phosphomannomutase; E=1e-61 PFAM: PF02878; Phosphoglucomutase/phosphomannomu; E=4.1e-29 PF02879; Phosphoglucomutase/phosphomannomu; E=1.2e-15 PF02880; Phosphoglucomutase/phosphomannomu; E=0.00028; phosphomannomutase (pmm) complement(5293371..5294813) Rhodopirellula baltica SH 1 1795397 NP_869095.1 CDS fwdA NC_005027.1 5294812 5296632 D PMID: 9651254 PMID: 10215859 PMID: 10848995 PMID: 11073907 best DB hits: BLAST: gb:AAG32950.1; (AF032114) formylmethanofuran; E=6e-98 pir:S57456; formylmethanofuran dehydrogenase (EC 1.2.99.5); E=8e-72 pir:G69074; formylmethanofuran dehydrogenase (EC 1.2.99.5); E=3e-71 COG: MTH1557; COG1229 Formylmethanofuran dehydrogenase subunit A; E=3e-72 PFAM: PF02612; N-acetylglucosamine-6-phosphat; E=0.0077; formylmethanofuran dehydrogenase subunit A 5294812..5296632 Rhodopirellula baltica SH 1 1793558 NP_869096.1 CDS ffsA NC_005027.1 5296625 5297629 D catalyzes the transfer of a formyl group from formylmethanofuran to tetrahydromethanopterin tetrahydromethanopterin; formylmethanofuran--tetrahydromethanopterin formyltransferase 5296625..5297629 Rhodopirellula baltica SH 1 1794930 NP_869097.1 CDS fwdC NC_005027.1 5297626 5298417 D PMID: 8575452 best DB hits: BLAST: gb:AAB89324.1; (AE000970) tungsten formylmethanofuran; E=2e-17 pir:T45154; probable formylmethanofuran dehydrogenase (EC 1.2.99.5); E=3e-17 swissprot:Q59579; FWDC_METTM TUNGSTEN-CONTAINING; E=2e-14 COG: AF1931; COG2218 Formylmethanofuran dehydrogenase subunit C; E=2e-18 TM0394; COG0070 Glutamate synthetase domain 3; E=2e-06 MJ0658; COG2218 Formylmethanofuran dehydrogenase subunit C; E=0.001 PFAM: PF01493; Domain of unknown function DUF14; E=1.3e-06; tungsten formylmethanofuran dehydrogenase, subunit C (fwdC) 5297626..5298417 Rhodopirellula baltica SH 1 1796313 NP_869098.1 CDS RB9838 NC_005027.1 5298462 5298938 R hypothetical protein complement(5298462..5298938) Rhodopirellula baltica SH 1 1791496 NP_869099.1 CDS RB9839 NC_005027.1 5299011 5299172 R hypothetical protein complement(5299011..5299172) Rhodopirellula baltica SH 1 1796428 NP_869100.1 CDS comE NC_005027.1 5299200 5301809 D PMID: 7968523 best DB hits: BLAST: pir:B75346; probable competence protein ComECRec2 - Deinococcus; E=2e-19 ddbj:BAA12454.1; (D84432) ComEC [Bacillus subtilis] -----; E=3e-19 swissprot:P39695; CME3_BACSU COME OPERON PROTEIN 3 ----- pir:; E=1e-18 COG: DR1854_2; COG2333 Predicted hydrolases of metallo-beta-lactamase; E=3e-16 BH1335_1; COG0658 Predicted multitransmembrane, metal-binding; E=5e-13 PA2984_2; COG2333 Predicted hydrolases of metallo-beta-lactamase; E=5e-09 PFAM: PF00753; Metallo-beta-lactamase superfamil; E=1.5e-07; competence protein ComEC 5299200..5301809 Rhodopirellula baltica SH 1 1796681 NP_869101.1 CDS RB9844 NC_005027.1 5301844 5302797 D hypothetical protein 5301844..5302797 Rhodopirellula baltica SH 1 1794903 NP_869102.1 CDS hemA NC_005027.1 5302794 5304074 D PMID: 2110138 best DB hits: BLAST: swissprot:P16618; HEM1_BACSU GLUTAMYL-TRNA REDUCTASE (GLUTR); E=4e-56 swissprot:P42807; HEM1_PSEAE GLUTAMYL-TRNA REDUCTASE (GLUTR); E=1e-54 ddbj:BAB06767.1; (AP001517) glutamyl-tRNA reductase [Bacillus; E=8e-53 COG: BS_hemA; COG0373 Glutamyl-tRNA reductase; E=4e-57 PFAM: PF01089; Delta 1-pyrroline-5-carboxyla; E=0.55 PF01408; Oxidoreductase, NAD-bi; E=4.2e-05 PF01488; Shikimate / quinate 5-dehydro; E=7.6e-05; glutamyl-tRNA reductase 5302794..5304074 Rhodopirellula baltica SH 1 1796251 NP_869103.1 CDS RB9849 NC_005027.1 5304088 5304933 D best DB hits: BLAST: pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=3e-04; hypothetical protein 5304088..5304933 Rhodopirellula baltica SH 1 1796064 NP_869104.1 CDS cnrH NC_005027.1 5304982 5305653 D PMID: 8052622 best DB hits: BLAST: swissprot:P37978; CNRH_ALCEU RNA POLYMERASE SIGMA FACTOR CNRH; E=5e-04 pir:G83282; probable sigma-70 factor, ECF subfamily PA2896; E=0.008 pir:S74832; transcription initiation factor sigma E sll0856 -; E=0.055 COG: PA2896; COG1595 DNA-directed RNA polymerase specialized sigma; E=8e-04 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=0.028 PF00140; Sigma-70 factor; E=0.028; RNA polymerase sigma factor cnrH 5304982..5305653 Rhodopirellula baltica SH 1 1792130 NP_869105.1 CDS pknB NC_005027.1 5305661 5307355 D best DB hits: BLAST: pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=4e-44 swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=5e-44 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=3e-43 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=3e-44 PFAM: PF00069; Protein kinase domain; E=2.2e-48; serine/threonine protein kinase 5305661..5307355 Rhodopirellula baltica SH 1 1795770 NP_869106.1 CDS RB9855 NC_005027.1 5307599 5308990 R best DB hits: BLAST: pir:E71127; hypothetical protein PH0786 - Pyrococcus horikoshii; E=0.013 pir:T32472; hypothetical protein F08F1.7 - Caenorhabditis elegans; E=0.87 PFAM: PF02366; Dolichyl-phosphate-mannose-prote; E=0.00021; transmembrane protein complement(5307599..5308990) Rhodopirellula baltica SH 1 1793880 NP_869107.1 CDS metH NC_005027.1 5308914 5312654 R one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase complement(5308914..5312654) Rhodopirellula baltica SH 1 1791598 NP_869108.1 CDS RB9858 NC_005027.1 5312605 5312790 D hypothetical protein 5312605..5312790 Rhodopirellula baltica SH 1 1795433 NP_869109.1 CDS RB9859 NC_005027.1 5312651 5312860 R hypothetical protein complement(5312651..5312860) Rhodopirellula baltica SH 1 1796092 NP_869110.1 CDS RB9860 NC_005027.1 5312803 5313810 D best DB hits: BLAST: embl:CAC01649.1; (AL391072) conserved hypothetical protein; E=2e-34 embl:CAB55712.1; (AL117387) hypothetical protein SCF41.09; E=2e-29 swissprot:P55567; Y4MH_RHISN HYPOTHETICAL 33.9 KD PROTEIN Y4MH; E=2e-15; hypothetical protein 5312803..5313810 Rhodopirellula baltica SH 1 1796508 NP_869111.1 CDS RB9861 NC_005027.1 5313829 5314125 D hypothetical protein 5313829..5314125 Rhodopirellula baltica SH 1 1796437 NP_869112.1 CDS RB9863 NC_005027.1 5314129 5314242 D hypothetical protein 5314129..5314242 Rhodopirellula baltica SH 1 1793159 NP_869113.1 CDS RB9867 NC_005027.1 5314345 5314974 R hypothetical protein complement(5314345..5314974) Rhodopirellula baltica SH 1 1793090 NP_869114.1 CDS ilvC NC_005027.1 5314979 5315983 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(5314979..5315983) Rhodopirellula baltica SH 1 1790269 NP_869115.1 CDS ilvN NC_005027.1 5316045 5316629 R PMID: 6308579 PMID: 1851954 best DB hits: BLAST: swissprot:O27492; ILVH_METTH PROBABLE ACETOLACTATE SYNTHASE SMALL; E=1e-27 pir:S74358; acetolactate synthase ilvN - Synechocystis sp. (strain; E=5e-27 gb:AAB89532.1; (AE000985) acetolactate synthase, small subunit; E=9e-27 COG: MTH1443; COG0440 Acetolactate synthase, small subunit; E=9e-29 PFAM: PF01842; ACT domain; E=1.1e-18; acetolactate synthase small subunit complement(5316045..5316629) Rhodopirellula baltica SH 1 1791592 NP_869116.1 CDS RB9872 NC_005027.1 5316692 5316895 D hypothetical protein 5316692..5316895 Rhodopirellula baltica SH 1 1795169 NP_869117.1 CDS ypuG NC_005027.1 5316908 5317711 D best DB hits: BLAST: swissprot:P35154; YPUG_BACSU HYPOTHETICAL 29.6 KD PROTEIN IN; E=4e-18 ddbj:BAB05279.1; (AP001512) BH1560~unknown conserved protein; E=3e-14 pir:D81075; conserved hypothetical protein NMB1504 [imported] -; E=3e-13 COG: BS_ypuG; COG1354 Uncharacterized ACR; E=4e-19 PFAM: PF02616; Uncharacterized ACR, COG1354; E=1.1e-14; hypothetical protein 5316908..5317711 Rhodopirellula baltica SH 1 1795842 NP_869118.1 CDS RB9875 NC_005027.1 5317708 5318550 D best DB hits: BLAST: gb:AAG52354.1; AC011765_6 (AC011765) unknown protein; E=2e-36 gb:AAD55271.1; AC008263_2 (AC008263) ESTs gb AA067482 and gb; E=4e-34 gb:AAD25827.1; AC006951_6 (AC006951) hypothetical protein; E=1e-29 COG: TM0864; COG1234 Metal-dependent hydrolases of the beta-lactamase; E=8e-06 PFAM: PF02112; cAMP phosphodiesterases class-; E=0.25 PF00753; Metallo-beta-lactamase superfa; E=0.036; hypothetical protein 5317708..5318550 Rhodopirellula baltica SH 1 1795018 NP_869119.1 CDS hemN NC_005027.1 5318552 5319721 D PMID: 8757728 best DB hits: BLAST: ddbj:BAB05062.1; (AP001511) coproporphyrinogen III oxidase; E=7e-49 pir:B69640; coproporphyrinogen oxidase (EC 1.3.3.3) III,; E=4e-47 swissprot:P54304; HEMN_BACSU PROBABLE OXYGEN-INDEPENDENT; E=5e-47 COG: BH1343; COG0635 Coproporphyrinogen III oxidase and related FeS; E=7e-50 PFAM: PF02473; Oxygen-independent Coproporphy; E=2.7e-17; coproporphyrinogen III oxidase 5318552..5319721 Rhodopirellula baltica SH 1 1791246 NP_869120.1 CDS RB9877 NC_005027.1 5319678 5319887 D hypothetical protein 5319678..5319887 Rhodopirellula baltica SH 1 1795061 NP_869121.1 CDS RB9878 NC_005027.1 5319838 5320185 D hypothetical protein 5319838..5320185 Rhodopirellula baltica SH 1 1790493 NP_869122.1 CDS RB9879 NC_005027.1 5320131 5320868 R best DB hits: BLAST: pir:C83489; probable transcriptional regulator PA1261 [imported] -; E=6e-26 pir:H83309; probable transcriptional regulator PA2696 [imported] -; E=8e-14 ddbj:BAB04708.1; (AP001510) transcriptional regulator (AraCXylS; E=1e-11 COG: PA1261; COG2207 AraC-type DNA-binding domain-containing proteins; E=5e-27 PFAM: PF00989; PAS domain; E=0.18 PF00165; Bacterial regulatory helix-turn-heli; E=7.6e-24; transcriptional regulator complement(5320131..5320868) Rhodopirellula baltica SH 1 1796043 NP_869123.1 CDS pam NC_005027.1 5320852 5322111 D PMID: 3153462 best DB hits: BLAST: gb:AAF58870.1; (AE003831) CG12130 gene product [Drosophila; E=0.033 ddbj:BAA06104.1; (D29625) precursor peptide [Equus caballus]; E=0.041 pir:T25723; hypothetical protein F21F3.1 - Caenorhabditis elegans; E=0.14; peptidylglycine monooxygenase 5320852..5322111 Rhodopirellula baltica SH 1 1791810 NP_869124.1 CDS RB9884 NC_005027.1 5322182 5325406 D best DB hits: BLAST: gb:AAF24999.1; (AF141320) endo-inulinase [Pseudomonas mucidolens]; E=0.45; endo-inulinase 5322182..5325406 Rhodopirellula baltica SH 1 1795119 NP_869125.1 CDS RB9886 NC_005027.1 5325468 5327039 D sulfatase 5325468..5327039 Rhodopirellula baltica SH 1 1795045 NP_869126.1 CDS yjlD NC_005027.1 5327180 5328352 D best DB hits: BLAST: pir:S74947; hypothetical protein slr1591 - Synechocystis sp. (strain; E=1e-43 pir:F83079; NADH dehydrogenase PA4538 [imported] - Pseudomonas; E=9e-08 gb:AAK06224.1; AE006441_2 (AE006441) NADH oxidase [Lactococcus; E=1e-07 COG: slr1591; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; E=1e-44 PA4538; COG1252 NADH dehydrogenase, FAD-containing subunit; E=9e-09 Ta1129; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; E=6e-07 PFAM: PF02411; MerT mercuric transport prote; E=0.58 PF01266; D-amino acid oxidase; E=0.097 PF00070; Pyridine nucleotide-disulphid; E=4.6e-14; NADH dehydrogenase 5327180..5328352 Rhodopirellula baltica SH 1 1793256 NP_869127.1 CDS cydA NC_005027.1 5328390 5329865 D PMID: 2843510 best DB hits: BLAST: pir:F72119; cytochrome oxidase chain I - Chlamydophila pneumoniae; E=3e-89 pir:A81721; cytochrome D ubiquinol oxidase, chain I TC0281; E=7e-86 pir:F71567; probable cytochrome oxidase chain I - Chlamydia; E=2e-85 COG: CPn0102; COG1271 Cytochrome bd-type quinol oxidase, subunit 1; E=3e-90 PFAM: PF01654; Bacterial Cytochrome Ubiquinol Ox; E=1.3e-170; cytochrome oxidase chain I 5328390..5329865 Rhodopirellula baltica SH 1 1795785 NP_869128.1 CDS cydB NC_005027.1 5329862 5330890 D PMID: 2843510 best DB hits: BLAST: gb:AAG01153.1; AF284438_4 (AF284438) cytochrome d oxidase subunit; E=3e-51 pir:H70417; cytochrome oxidase d subunit II - Aquifex aeolicus; E=1e-49 pir:G72119; cytochrome D ubiquinol oxidase, chain II CP0671; E=2e-47 COG: aq_1358; COG1294 Cytochrome bd-type quinol oxidase, subunit 2; E=9e-51 PFAM: PF02322; Cytochrome oxidase subunit II; E=4.7e-139; cytochrome d oxidase subunit 5329862..5330890 Rhodopirellula baltica SH 1 1794567 NP_869129.1 CDS RB9895 NC_005027.1 5330911 5333682 R signal peptide complement(5330911..5333682) Rhodopirellula baltica SH 1 1795518 NP_869130.1 CDS RB9897 NC_005027.1 5333549 5333773 R hypothetical protein complement(5333549..5333773) Rhodopirellula baltica SH 1 1790741 NP_869131.1 CDS RB9898 NC_005027.1 5333967 5334593 D PMID: 8626329 best DB hits: BLAST: embl:CAC11607.1; (AL445064) probable intracellular proteinase I; E=2e-33 pir:F72722; hypothetical protein APE0319 - Aeropyrum pernix (strain; E=4e-27 gb:AAB89965.1; (AE001016) intracellular protease (pfpI); E=3e-20 COG: Ta0465; COG0693 intracellular protease/amidase; E=2e-34 PFAM: PF01965; ThiJ/PfpI family; E=3.6e-26; intracellular proteinase I 5333967..5334593 Rhodopirellula baltica SH 1 1796973 NP_869132.1 CDS RB9900 NC_005027.1 5334744 5335766 R signal peptide complement(5334744..5335766) Rhodopirellula baltica SH 1 1796734 NP_869133.1 CDS RB9902 NC_005027.1 5335763 5336299 R chaperonine complement(5335763..5336299) Rhodopirellula baltica SH 1 1795124 NP_869134.1 CDS RB9903 NC_005027.1 5336312 5337100 R hypothetical protein complement(5336312..5337100) Rhodopirellula baltica SH 1 1796280 NP_869135.1 CDS RB9904 NC_005027.1 5337111 5337344 R hypothetical protein complement(5337111..5337344) Rhodopirellula baltica SH 1 1796463 NP_869136.1 CDS RB9905 NC_005027.1 5337287 5338162 D best DB hits: BLAST: pir:S35005; probable transposase - Acetobacter xylinus insertion; E=5e-56 gb:AAD47597.1; AF144038_1 (AF144038) transposase; E=1e-55 pir:S77171; transposase sll1710 - Synechocystis sp. (strain PCC; E=4e-55 COG: sll1710; COG3293 Predicted transposase; E=3e-56 PFAM: PF01511; Transposase; E=9e-35 PF01675; Transposase; E=2.1e-31; transposase 5337287..5338162 Rhodopirellula baltica SH 1 1796365 NP_869137.1 CDS RB9907 NC_005027.1 5338185 5339486 D best DB hits: BLAST: gb:AAD45539.1; U70376_1 (U70376) InsA [Streptomyces netropsis]; E=5e-33 gb:AAG60893.1; AF322013_12 (AF322013) ID460 [Bradyrhizobium; E=8e-33 ddbj:BAA19966.1; (D63923) transposase [Acetobacter pasteurianus]; E=1e-26; InsA (transposase) 5338185..5339486 Rhodopirellula baltica SH 1 1790102 NP_869138.1 CDS RB9908 NC_005027.1 5339497 5339649 D hypothetical protein 5339497..5339649 Rhodopirellula baltica SH 1 1793638 NP_869139.1 CDS RB9909 NC_005027.1 5339539 5339913 R hypothetical protein complement(5339539..5339913) Rhodopirellula baltica SH 1 1791927 NP_869140.1 CDS RB9911 NC_005027.1 5340153 5342036 R PMID: 3139632 PMID: 7664125 best DB hits: BLAST: gb:AAA90913.1; (U33060) endo-1,4-beta-xylanase [Thermotoga sp.]; E=2e-33 pir:B72423; endo-1,4-beta-xylanase B - Thermotoga maritima (strain; E=3e-33 swissprot:Q60041; XYNB_THENE ENDO-1,4-BETA-XYLANASE B PRECURSOR; E=2e-31 PFAM: PF00331; Glycosyl hydrolase 10; E=0.05; endo-1,4-beta-xylanase complement(5340153..5342036) Rhodopirellula baltica SH 1 1796450 NP_869141.1 CDS RB9913 NC_005027.1 5341978 5342994 R signal peptide complement(5341978..5342994) Rhodopirellula baltica SH 1 1794880 NP_869142.1 CDS rplI NC_005027.1 5343249 5343782 R PMID: 3528756 best DB hits: BLAST: pir:C82333; ribosomal protein L9 VC0369 [imported] - Vibrio cholerae; E=2e-23 pir:B82543; 50S ribosomal protein L9 XF2559 [imported] - Xylella; E=9e-20 swissprot:P02418; RL9_ECOLI 50S RIBOSOMAL PROTEIN L9 -----; E=4e-19 COG: VC0369; COG0359 Ribosomal protein L9; E=2e-24 PFAM: PF01281; Ribosomal protein L9; E=1.1e-39; ribosomal protein L9 complement(5343249..5343782) Rhodopirellula baltica SH 1 1795727 NP_869143.1 CDS ssb NC_005027.1 5343861 5344370 R PMID: 6270666 PMID: 6384214 best DB hits: BLAST: swissprot:O83101; SSB_TREPA SINGLE-STRAND BINDING PROTEIN (SSB); E=7e-23 embl:CAA76674.1; (Y17166) single strand DNA binding protein; E=1e-19 pir:B81310; single-strand DNA binding protein Cj1071 [imported] -; E=1e-19 COG: TP0062; COG0629 Single-stranded DNA-binding protein; E=7e-24 PFAM: PF00436; Single-strand binding protein family; E=1.7e-48; single-strand binding protein complement(5343861..5344370) Rhodopirellula baltica SH 1 1795538 NP_869144.1 CDS RB9918 NC_005027.1 5344369 5344872 D hypothetical protein 5344369..5344872 Rhodopirellula baltica SH 1 1795375 NP_869145.1 CDS rpsF NC_005027.1 5344405 5344827 R PMID: 3528756 best DB hits: BLAST: embl:CAA76675.1; (Y17166) ribosomal protein S6 [Campylobacter; E=3e-06 swissprot:Q9ZAH3; RS6_CAMJE 30S RIBOSOMAL PROTEIN S6 -----; E=4e-06 swissprot:P56013; RS6_HELPY 30S RIBOSOMAL PROTEIN S6 -----; E=8e-06 COG: Cj1070; COG0360 Ribosomal protein S6; E=4e-07 PFAM: PF01250; Ribosomal protein S6; E=1.3e-13; ribosomal protein S6 complement(5344405..5344827) Rhodopirellula baltica SH 1 1796857 NP_869146.1 CDS pth NC_005027.1 5344869 5345441 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(5344869..5345441) Rhodopirellula baltica SH 1 1793404 NP_869147.1 CDS rplY NC_005027.1 5345438 5346076 R best DB hits: BLAST: swissprot:P14194; CTC_BACSU GENERAL STRESS PROTEIN CTC -----; E=4e-18 pir:S05373; ctc protein - Bacillus subtilis (fragment) -----; E=1e-17 ddbj:BAB03786.1; (AP001507) 50S ribosomal protein L25 [Bacillus; E=1e-16 COG: BS_ctc; COG1825 Ribosomal protein L25 (general stress protein Ctc); E=4e-19 PFAM: PF01386; Ribosomal L25p family; E=6.1e-20; 50S ribosomal protein L25 complement(5345438..5346076) Rhodopirellula baltica SH 1 1797218 NP_869148.1 CDS RB9926 NC_005027.1 5346254 5347174 R best DB hits: BLAST: ddbj:BAB10440.1; (AB009055) pyruvate kinase [Arabidopsis; E=0.25; pyruvate kinase-hypothetical secreted or membrane associated protein complement(5346254..5347174) Rhodopirellula baltica SH 1 1796055 NP_869149.1 CDS clpX NC_005027.1 5347256 5348656 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(5347256..5348656) Rhodopirellula baltica SH 1 1796267 NP_869150.1 CDS RB9930 NC_005027.1 5348975 5349331 R best DB hits: PFAM: PF01537; Herpesvirus glycoprotein D; E=0.22; signal peptide complement(5348975..5349331) Rhodopirellula baltica SH 1 1797211 NP_869151.1 CDS RB9932 NC_005027.1 5349475 5350425 R best DB hits: BLAST: pir:T34932; hypothetical protein SC3F9.10 SC3F9.10 - Streptomyces; E=5e-06 pir:T36189; probable isomerase - Streptomyces coelicolor -----; E=0.001; hypothetical protein complement(5349475..5350425) Rhodopirellula baltica SH 1 1791728 NP_869152.1 CDS RB9936 NC_005027.1 5350464 5350640 D hypothetical protein 5350464..5350640 Rhodopirellula baltica SH 1 1797150 NP_869153.1 CDS RB9937 NC_005027.1 5350651 5352162 D best DB hits: BLAST: pir:H82133; conserved hypothetical protein VC1966 [imported] -; E=1e-23 pir:F81867; probable integral membrane protein NMA1715 [imported] -; E=4e-22 pir:B81074; transporter, probable NMB1515 [imported] - Neisseria; E=1e-21 COG: VC1966_1; COG0477 Permeases of the major facilitator superfamily; E=1e-22; transporter 5350651..5352162 Rhodopirellula baltica SH 1 1795170 NP_869154.1 CDS RB9941 NC_005027.1 5352096 5352302 R hypothetical protein complement(5352096..5352302) Rhodopirellula baltica SH 1 1796644 NP_869155.1 CDS RB9942 NC_005027.1 5352324 5353916 R best DB hits: BLAST: swissprot:O05979; Y789_RICPR HYPOTHETICAL PROTEIN RP789 -----; E=9e-51 embl:CAA72463.1; (Y11779) hypothetical protein [Rickettsia; E=6e-37 gb:AAK02458.1; (AE006073) unknown [Pasteurella multocida]; E=5e-35 COG: RP789_1; COG0500 SAM-dependent methyltransferases; E=8e-47; SAM-dependent methyltransferase complement(5352324..5353916) Rhodopirellula baltica SH 1 1791127 NP_869156.1 CDS cnt1 NC_005027.1 5353964 5355271 D PMID: 8027026 best DB hits: BLAST: gb:AAD52151.1; AF132298_1 (AF132298) broadly selective; E=3e-54 gb:AAK03376.1; (AE006168) unknown [Pasteurella multocida]; E=6e-54 swissprot:Q62674; CNT1_RAT SODIUMNUCLEOSIDE COTRANSPORTER 1; E=2e-53 COG: BH1446; COG1972 Nucleoside permease; E=2e-53 PFAM: PF01773; Na+ dependent nucleoside tran; E=1.1e-142; broadly selective sodium/nucleoside transporter hfCNT 5353964..5355271 Rhodopirellula baltica SH 1 1791583 NP_869157.1 CDS RB9945 NC_005027.1 5355360 5356313 D signal peptide 5355360..5356313 Rhodopirellula baltica SH 1 1790830 NP_869158.1 CDS RB9948 NC_005027.1 5356736 5357236 R hypothetical protein complement(5356736..5357236) Rhodopirellula baltica SH 1 1794279 NP_869159.1 CDS RB9950 NC_005027.1 5357353 5359563 R best DB hits: BLAST: embl:CAB66476.1; (AL136541) hypothetical protein [Homo sapiens]; E=0.31 embl:CAA62913.1; (X91803) sodium-calcium exchanger; E=0.43 PFAM: PF00404; Dockerin type I repeat; E=0.19; hypothetical protein complement(5357353..5359563) Rhodopirellula baltica SH 1 1794283 NP_869160.1 CDS surE NC_005027.1 5359676 5360476 R PMID: 7928962 best DB hits: BLAST: pir:F82311; survival protein SurE VC0531 [imported] - Vibrio; E=2e-37 gb:AAD51394.1; AF117715_3 (AF117715) survival protein homolog; E=8e-35 swissprot:O67004; SURE_AQUAE STATIONARY-PHASE SURVIVAL PROTEIN; E=5e-34 COG: VC0531; COG0496 Survival protein, predicted acid phosphatase; E=2e-38 PFAM: PF01975; Survival protein SurE; E=3.1e-64; survival protein SurE complement(5359676..5360476) Rhodopirellula baltica SH 1 1794676 NP_869161.1 CDS RB9953 NC_005027.1 5360489 5362111 R best DB hits: BLAST: pir:D82536; conserved hypothetical protein XF2619 [imported] -; E=1e-140 pir:T49917; hypothetical protein T24H18.200 - Arabidopsis thaliana; E=1e-100 swissprot:P77649; YDIU_ECOLI HYPOTHETICAL 54.4 KD PROTEIN IN; E=2e-82 COG: XF2619; COG0397 Uncharacterized ACR; E=1e-141 PFAM: PF02696; Uncharacterized ACR, YdiU/UPF0061; E=5e-63; hypothetical protein complement(5360489..5362111) Rhodopirellula baltica SH 1 1794100 NP_869162.1 CDS RB9955 NC_005027.1 5362247 5363605 R best DB hits: PFAM: PF01676; Metalloenzyme superfamily; E=0.78; hypothetical protein complement(5362247..5363605) Rhodopirellula baltica SH 1 1796452 NP_869163.1 CDS RB9957 NC_005027.1 5363607 5366096 R signal peptide complement(5363607..5366096) Rhodopirellula baltica SH 1 1789948 NP_869164.1 CDS RB9959 NC_005027.1 5366220 5366417 R hypothetical protein complement(5366220..5366417) Rhodopirellula baltica SH 1 1796198 NP_869165.1 CDS RB9960 NC_005027.1 5366418 5367416 D signal peptide 5366418..5367416 Rhodopirellula baltica SH 1 1790784 NP_869166.1 CDS RB9964 NC_005027.1 5367674 5368651 R hypothetical protein complement(5367674..5368651) Rhodopirellula baltica SH 1 1795015 NP_869167.1 CDS RB9966 NC_005027.1 5368655 5370040 R best DB hits: BLAST: pir:C72330; astBchuR-related protein - Thermotoga maritima (strain; E=1e-30 gb:AAB89245.1; (AE000964) heme biosynthesis protein (nirJ-2); E=2e-14 pir:H72545; probable coenzyme PQQ synthesis protein APE1652 -; E=4e-10 COG: TM0824; COG0535 Predicted Fe-S oxidoreductases; E=1e-31 AF2006; COG2896 Molybdenum cofactor biosynthesis enzyme; E=0.002 MJ0907; COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); E=0.004 PFAM: PF01444; moaA / nifB / pqqE family; E=0.00043; hypothetical protein complement(5368655..5370040) Rhodopirellula baltica SH 1 1794642 NP_869168.1 CDS RB9969 NC_005027.1 5370020 5370340 D hypothetical protein 5370020..5370340 Rhodopirellula baltica SH 1 1792404 NP_869169.1 CDS RB9971 NC_005027.1 5370350 5371720 D best DB hits: BLAST: ddbj:BAB05884.1; (AP001514) BH2165~unknown conserved protein; E=3e-11 ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=1e-09 gb:AAC23913.1; (AF039207) NADH-dependent dehydrogenase homolog; E=2e-09 COG: BH2165; COG0673 Predicted dehydrogenases and related proteins; E=3e-12 PFAM: PF01408; Oxidoreductase, NAD-bin; E=3.7e-23; NADH-dependent dyhydrogenase 5370350..5371720 Rhodopirellula baltica SH 1 1793676 NP_869170.1 CDS RB9973 NC_005027.1 5371844 5373487 R PMID: 11259647; hypothetical protein complement(5371844..5373487) Rhodopirellula baltica SH 1 1791799 NP_869171.1 CDS RB9977 NC_005027.1 5373768 5375321 D hypothetical protein 5373768..5375321 Rhodopirellula baltica SH 1 1794217 NP_869172.1 CDS RB9979 NC_005027.1 5375015 5377234 D PMID: 10517319 best DB hits: BLAST: gb:AAF35250.1; AF227632_1 (AF227632) mismatch binding protein Mus3; E 4e-12 pir:T41262; mutS family DNA mismatch repair protein - fission yeast; E 3e-11 gb:AAB57798.1; (AF001535) AGAA.3 [Arabidopsis thaliana]; E=5e-11 COG: VC0535; COG0249 MutS-like ATPases involved in mismatch repair,; E=5e-12 BU429; COG0249 MutS-like ATPases involved in mismatch repair, family; E=6e-12 XF1716; COG0249 MutS-like ATPases involved in mismatch repair,; E=1e-10 PFAM: PF00488; DNA mismatch repair proteins, mutS f; E=0.0026; mismatch binding protein 5375015..5377234 Rhodopirellula baltica SH 1 1792317 NP_869173.1 CDS RB9981 NC_005027.1 5377256 5377441 R hypothetical protein complement(5377256..5377441) Rhodopirellula baltica SH 1 1796406 NP_869174.1 CDS RB9982 NC_005027.1 5377468 5378649 D best DB hits: BLAST: embl:CAC24034.1; (AL512980) ORF-c34_017 [Sulfolobus solfataricus]; E=1e-11 pir:H69216; 3-chlorobenzoate-3,4-dioxygenase dyhydrogenase related; E=3e-10 pir:T36464; probable oxidoreductase - Streptomyces coelicolor; E=2e-09 COG: MTH875; COG0673 Predicted dehydrogenases and related proteins; E=3e-11 PFAM: PF01408; Oxidoreductase, NAD-bin; E=1.1e-09 PF02894; Oxidoreductase, C-termi; E=0.0018; 3-chlorobenzoate-3,4-dioxygenase dyhydrogenase related protein 5377468..5378649 Rhodopirellula baltica SH 1 1790355 NP_869175.1 CDS pmi NC_005027.1 5378777 5379757 R PMID: 8293960 best DB hits: BLAST: pir:B75598; probable mannose-6-phosphate isomerase - Deinococcus; E=7e-43 pir:H69848; mannose-6-phosphate isomerase homolog yjdE - Bacillus; E=5e-39 ddbj:BAA75351.1; (AB011838) mannnose-6 phospate isomelase; E=8e-39 COG: DRA0048; COG1482 Phosphomannose isomerase; E=7e-44 PFAM: PF01238; Phosphomannose isomerase type I; E=0.0026; mannose-6-phosphate isomerase complement(5378777..5379757) Rhodopirellula baltica SH 1 1790036 NP_869176.1 CDS RB9985 NC_005027.1 5379828 5380382 R hypothetical protein complement(5379828..5380382) Rhodopirellula baltica SH 1 1795804 NP_869177.1 CDS RB9986 NC_005027.1 5380379 5380717 R hypothetical protein complement(5380379..5380717) Rhodopirellula baltica SH 1 1796375 NP_869178.1 CDS RB9989 NC_005027.1 5380734 5381816 R hypothetical protein complement(5380734..5381816) Rhodopirellula baltica SH 1 1794740 NP_869179.1 CDS RB9990 NC_005027.1 5381822 5381983 D hypothetical protein 5381822..5381983 Rhodopirellula baltica SH 1 1790243 NP_869180.1 CDS RB9992 NC_005027.1 5382085 5383545 R best DB hits: BLAST: pir:C75316; conserved hypothetical protein - Deinococcus radiodurans; E=1e-63 gb:AAG19052.1; (AE005004) Vng0525c [Halobacterium sp. NRC-1]; E=1e-47 pir:B72260; conserved hypothetical protein - Thermotoga maritima; E=2e-46 COG: DR2101; COG0719 Predicted membrane components of an uncharacterized; E=1e-64 VNG0525C; COG0719 Predicted membrane components of an; E=1e-48 TM1369; COG0719 Predicted membrane components of an uncharacterized; E=2e-47 PFAM: PF02291; Transcription initiation factor IID,; E=0.53 PF01458; Uncharacterized protein family (UPF0; E=2.1e-67; iron-regulated ABC transporter complement(5382085..5383545) Rhodopirellula baltica SH 1 1794871 NP_869181.1 CDS RB9995 NC_005027.1 5383639 5385045 R best DB hits: BLAST: ddbj:BAB07186.1; (AP001518) BH3467~unknown conserved protein; E=1e-174 pir:T35997; conserved hypothetical protein SCC22.07c - Streptomyces; E=1e-174 pir:D70019; conserved hypothetical protein yurU - Bacillus subtilis; E=1e-171 COG: BH3467; COG0719 Predicted membrane components of an uncharacterized; E=1e-175 VNG0525C; COG0719 Predicted membrane components of an; E=1e-135 TP0612; COG0719 Predicted membrane components of an uncharacterized; E=1e-132 PFAM: PF01458; Uncharacterized protein family (UPF0; E=8.2e-125; iron-regulated ABC transporter complement(5383639..5385045) Rhodopirellula baltica SH 1 1791821 NP_869182.1 CDS RB9998 NC_005027.1 5385104 5385937 R best DB hits: BLAST: pir:B70872; probable ABC-type transporter ATP-binding protein -; E=3e-68 swissprot:P80866; V296_BACSU VEGETATIVE PROTEIN 296 (VEG296); E=4e-66 ddbj:BAB07190.1; (AP001518) ABC transporter (ATP-binding protein); E=1e-64 COG: Rv1463; COG0396 Iron-regulated ABC transporter ATPase subunit SufC; E=3e-69 PFAM: PF00005; ABC transporter; E=9.6e-30; ABC transporter ATP-binding protein complement(5385104..5385937) Rhodopirellula baltica SH 1 1797185 NP_869183.1 CDS RB9999 NC_005027.1 5385983 5386828 R best DB hits: BLAST: pir:D82048; conserved hypothetical protein VC2666 [imported] -; E=7e-06 ddbj:BAB07148.1; (AP001518) BH3429~unknown conserved protein in; E=0.001 pir:S72759; hypothetical protein B1496_C2_188 - Mycobacterium leprae; E=0.004 COG: VC2666; COG2345 Predicted transcriptional regulator; E=7e-07 PFAM: PF01037; AsnC family; E=0.23; transcriptional regulator complement(5385983..5386828) Rhodopirellula baltica SH 1 1793381 NP_869184.1 CDS gcd NC_005027.1 5387011 5388126 D PMID: 8436115 PMID: 2803257 best DB hits: BLAST: gb:AAG18991.1; (AE004999) glucose dehydrogenase; Gcd; E=2e-27 pir:T44937; glucose 1-dehydrogenase (EC 1.1.1.47) [imported] -; E=1e-25 pir:S29788; glucose 1-dehydrogenase (EC 1.1.1.47) - Thermoplasma; E=3e-13 COG: VNG0446G; COG1063 Threonine dehydrogenase and related Zn-dependent; E=2e-28 YDL168w; COG1062 Zn-dependent alcohol dehydrogenases, class III; E=0.003 XF1727; COG1063 Threonine dehydrogenase and related Zn-dependent; E=0.005 PFAM: PF00107; Zinc-binding dehydrogenases; E=3.1e-22; glucose dehydrogenase Gcd 5387011..5388126 Rhodopirellula baltica SH 1 1794151 NP_869185.1 CDS serA NC_005027.1 5388110 5389189 D best DB hits: BLAST: gb:AAG19748.1; (AE005060) phosphoglycerate dehydrogenase; SerA2; E=4e-30 swissprot:P45637; YPRA_CORGL HYPOTHETICAL 33.0 KD PROTEIN IN; E=2e-28 pir:T35826; probable dehydrogenase - Streptomyces coelicolor -----; E=5e-26 COG: VNG1437G; COG0111 Phosphoglycerate dehydrogenase and related; E=3e-31 PA2263; COG1052 Lactate dehydrogenase and related dehydrogenases; E=2e-25 MTH970; COG0111 Phosphoglycerate dehydrogenase and related; E=3e-25 PFAM: PF02826; D-isomer specific 2-hydroxyacid; E=3.8e-62; phosphoglycerate dehydrogenase SerA2- NAD-dependent 2-hydroxyacid dehydrogenase 5388110..5389189 Rhodopirellula baltica SH 1 1796418 NP_869186.1 CDS RB10005 NC_005027.1 5389186 5389419 D hypothetical protein 5389186..5389419 Rhodopirellula baltica SH 1 1794213 NP_869187.1 CDS pdxH NC_005027.1 5389524 5390195 R PMID: 1356963 PMID: 7860596 PMID: 9693059 PMID: 10903950 PMID: 1453690 best DB hits: BLAST: ddbj:BAA97018.1; (AB024032) contains similarity to pyridoxamine; E=3e-50 embl:CAB95898.1; (AL359988) pyridoxamine oxidase; E=5e-50 pir:F83513; pyridoxine 5'-phosphate oxidase PA1049 [imported] -; E=1e-49 COG: PA1049; COG0259 Pyridoxamine phosphate oxidase; E=1e-50 PFAM: PF01243; Pyridoxamine 5'-phosphate oxi; E=4.2e-107; pyridoxamine oxidase complement(5389524..5390195) Rhodopirellula baltica SH 1 1796073 NP_869188.1 CDS RB10007 NC_005027.1 5390130 5391071 D best DB hits: BLAST: gb:AAF97283.1; AC010164_5 (AC010164) Unknown protein [Arabidopsis; E=0.087 pir:B82584; transcriptional regulator XF2228 [imported] - Xylella; E=0.32 pir:T10016; hypothetical protein - Mycobacterium leprae -----; E=0.64; hypothetical protein 5390130..5391071 Rhodopirellula baltica SH 1 1792406 NP_869189.1 CDS cspG NC_005027.1 5391076 5391459 D PMID: 8631696 best DB hits: BLAST: swissprot:P77605; CSPI_ECOLI COLD SHOCK-LIKE PROTEIN CSPI; E=0.27 embl:CAA72682.1; (Y11932) cspB [Salmonella typhimurium]; E=0.31 swissprot:Q47130; CSPG_ECOLI COLD SHOCK-LIKE PROTEIN CSPG; E=0.36 PFAM: PF00313; 'Cold-shock' DNA-binding domain; E=6.7e-05; cold shock-like protein cspI 5391076..5391459 Rhodopirellula baltica SH 1 1796396 NP_869190.1 CDS RB10010 NC_005027.1 5391460 5393982 R signal peptide complement(5391460..5393982) Rhodopirellula baltica SH 1 1796339 NP_869191.1 CDS RB10014 NC_005027.1 5393973 5395577 R best DB hits: PFAM: PF01676; Metalloenzyme superfamily; E=0.19; hypothetical protein complement(5393973..5395577) Rhodopirellula baltica SH 1 1794326 NP_869192.1 CDS RB10018 NC_005027.1 5395605 5396468 D hypothetical protein 5395605..5396468 Rhodopirellula baltica SH 1 1796212 NP_869193.1 CDS RB10019 NC_005027.1 5396392 5396559 D hypothetical protein 5396392..5396559 Rhodopirellula baltica SH 1 1792044 NP_869194.1 CDS RB10020 NC_005027.1 5396594 5396788 R hypothetical protein complement(5396594..5396788) Rhodopirellula baltica SH 1 1792554 NP_869195.1 CDS RB10021 NC_005027.1 5396777 5396923 D hypothetical protein 5396777..5396923 Rhodopirellula baltica SH 1 1791582 NP_869196.1 CDS RB10022 NC_005027.1 5396916 5397413 D hypothetical protein 5396916..5397413 Rhodopirellula baltica SH 1 1791951 NP_869197.1 CDS RB10023 NC_005027.1 5397477 5398001 D hypothetical protein 5397477..5398001 Rhodopirellula baltica SH 1 1796334 NP_869198.1 CDS RB10024 NC_005027.1 5397998 5398270 R hypothetical protein complement(5397998..5398270) Rhodopirellula baltica SH 1 1792494 NP_869199.1 CDS RB10025 NC_005027.1 5398325 5399254 R best DB hits: BLAST: pir:D83031; conserved hypothetical protein PA4926 [imported] -; E=4e-49 swissprot:Q50652; YP69_MYCTU HYPOTHETICAL 34.4 KDA PROTEIN RV2569C; E=2e-32 embl:CAA19100.1; (AL023591) hypothetical protein MLCB1259.25; E=4e-32 COG: PA4926; COG1305 transglutaminases, cysteine; E=4e-50 PFAM: PF01841; Transglutaminase-like superfam; E=1.6e-20; protease complement(5398325..5399254) Rhodopirellula baltica SH 1 1797202 NP_869200.1 CDS RB10026 NC_005027.1 5399251 5401902 R best DB hits: BLAST: pir:E83031; conserved hypothetical protein PA4927 [imported] -; E=1e-107 embl:CAA17945.1; (AL022118) hypothetical protein MLCB1913.13; E=1e-94 swissprot:Q50654; YP67_MYCTU HYPOTHETICAL 95.4 KDA PROTEIN RV2567; E=4e-88 COG: PA4927_1; COG2308 Uncharacterized BCR; E=4e-78 PA4927_2; COG2307 Uncharacterized BCR; E=4e-23; hypothetical protein complement(5399251..5401902) Rhodopirellula baltica SH 1 1792174 NP_869201.1 CDS RB10027 NC_005027.1 5402078 5405425 R best DB hits: BLAST: pir:B70729; hypothetical protein Rv2566 - Mycobacterium tuberculosis; E=0.0 gb:AAD10833.1; (U49838) 72.2 KDa protein [Mycobacterium leprae]; E=1e-174 embl:CAA17944.1; (AL022118) hypothetical protein MLCB1913.12; E=1e-110 COG: Rv2566_1; COG1305 transglutaminases, cysteine; E=6e-81 PFAM: PF01841; Transglutaminase-like superfam; E=2.7e-17; protease complement(5402078..5405425) Rhodopirellula baltica SH 1 1790829 NP_869202.1 CDS RB10028 NC_005027.1 5405422 5406468 R best DB hits: BLAST: pir:S74601; hypothetical protein sll1039 - Synechocystis sp. (strain; E=2e-67 gb:AAC08422.1; (AF054525) hypothetical protein [Synechococcus sp.; E=1e-61 pir:B75323; conserved hypothetical protein - Deinococcus radiodurans; E=1e-35 COG: sll1039; COG2307 Uncharacterized BCR; E=2e-68; hypothetical protein complement(5405422..5406468) Rhodopirellula baltica SH 1 1796186 NP_869203.1 CDS RB10030 NC_005027.1 5406484 5408100 R best DB hits: BLAST: swissprot:Q55587; Y335_SYNY3 HYPOTHETICAL 53.7 KDA PROTEIN SLL0335; E=1e-169 gb:AAC08421.1; (AF054525) hypothetical protein [Synechococcus sp.; E=1e-160 pir:C83429; conserved hypothetical protein PA1730 [imported] -; E=1e-135 COG: sll0335; COG2308 Uncharacterized BCR; E=1e-170; hypothetical protein complement(5406484..5408100) Rhodopirellula baltica SH 1 1790823 NP_869204.1 CDS RB10032 NC_005027.1 5408110 5408328 R signal peptide complement(5408110..5408328) Rhodopirellula baltica SH 1 1792926 NP_869205.1 CDS RB10033 NC_005027.1 5408291 5409271 R hypothetical protein complement(5408291..5409271) Rhodopirellula baltica SH 1 1791149 NP_869206.1 CDS RB10035 NC_005027.1 5409226 5410980 D best DB hits: BLAST: gb:AAG31169.1; (AF314961) unknown [Salmonella typhimurium]; E=0.23 pir:C82804; conserved hypothetical protein XF0464 [imported] -; E=0.79 PFAM: PF01011; PQQ enzyme repeat; E=0.016; membrane bound PQQ-employing oxidoreductase 5409226..5410980 Rhodopirellula baltica SH 1 1792841 NP_869207.1 CDS RB10036 NC_005027.1 5410896 5411729 D best DB hits: BLAST: embl:CAA77139.1; (Y18353) hypothetical protein [Thermus; E=2e-29 swissprot:P42981; YPJG_BACSU HYPOTHETICAL 24.8 KD PROTEIN IN; E=1e-24 ddbj:BAB05401.1; (AP001512) BH1682~unknown conserved protein; E=3e-23 COG: DR2363a; COG2120 Uncharacterized proteins, LmbE homologs; E=9e-32 PFAM: PF02585; Uncharacterized LmbE-like protein, C; E=4.6e-12; hypothetical protein 5410896..5411729 Rhodopirellula baltica SH 1 1790024 NP_869208.1 CDS RB10038 NC_005027.1 5411815 5413245 D hypothetical protein 5411815..5413245 Rhodopirellula baltica SH 1 1790205 NP_869209.1 CDS RB10039 NC_005027.1 5413242 5414639 R best DB hits: BLAST: gb:AAF31458.1; (AF223393) HRNT1 [Homo sapiens]; E=0.31 pir:B70374; conserved hypothetical protein aq_854 - Aquifex aeolicus; E=0.47 pir:A72220; conserved hypothetical protein - Thermotoga maritima; E=0.11 COG: PA5257; COG3071 Uncharacterized enzyme of heme biosynthesis; E=0.007 PFAM: PF00515; TPR Domain; E=2.9e-05; hypothetical protein complement(5413242..5414639) Rhodopirellula baltica SH 1 1791367 NP_869210.1 CDS mtrA NC_005027.1 5414632 5415855 R best DB hits: BLAST: gb:AAD05531.1; (AF083240) c-type cytochrome precursor [Shewanella; E=1e-04 gb:AAD05534.1; (AF083240) deca-heme c-type cytochrome [Shewanella; E=0.001; c-type cytochrome precursor complement(5414632..5415855) Rhodopirellula baltica SH 1 1796507 NP_869211.1 CDS RB10042 NC_005027.1 5415822 5416031 D signal peptide 5415822..5416031 Rhodopirellula baltica SH 1 1791930 NP_869212.1 CDS RB10043 NC_005027.1 5415836 5416018 R signal peptide complement(5415836..5416018) Rhodopirellula baltica SH 1 1795088 NP_869213.1 CDS RB10044 NC_005027.1 5416038 5416154 D hypothetical protein 5416038..5416154 Rhodopirellula baltica SH 1 1795815 NP_869214.1 CDS RB10045 NC_005027.1 5416167 5417477 R best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein complement(5416167..5417477) Rhodopirellula baltica SH 1 1795749 NP_869215.1 CDS RB10046 NC_005027.1 5417577 5417801 R hypothetical protein complement(5417577..5417801) Rhodopirellula baltica SH 1 1796020 NP_869216.1 CDS RB10047 NC_005027.1 5417619 5417843 D hypothetical protein 5417619..5417843 Rhodopirellula baltica SH 1 1794410 NP_869217.1 CDS RB10048 NC_005027.1 5417850 5419478 R PMID: 97078679 best DB hits: BLAST: embl:CAA67214.1; (X98625) sialic acid-specific 9-O-acetylesterase; E=1e-32 gb:AAB07813.1; (U40408) sialic-acid O-acetylesterase [Mus; E=2e-32 gb:AAD55976.1; (AF156856) cytosolic sialic acid; E=2e-29; sialic acid-specific 9-O-acetylesterase complement(5417850..5419478) Rhodopirellula baltica SH 1 1793803 NP_869218.1 CDS RB10049 NC_005027.1 5419507 5420160 D PMID: 8052622 best DB hits: BLAST: gb:AAF18265.1; U22895_1 (U22895) alternative sigma factor AlgU; E=2e-04 gb:AAF01335.1; AF190580_1 (AF190580) alternate sigma factor AlgT; E=8e-04 gb:AAC98488.1; (AF049107) ECF sigma factor RpoE1; E=0.001 COG: PA0762; COG1595 DNA-directed RNA polymerase specialized sigma; E=3e-04 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=3.1e-05 PF00140; Sigma-70 factor; E=0.6; alternative sigma factor AlgU 5419507..5420160 Rhodopirellula baltica SH 1 1790446 NP_869219.1 CDS RB10051 NC_005027.1 5420157 5423789 D hypothetical protein 5420157..5423789 Rhodopirellula baltica SH 1 1795993 NP_869220.1 CDS RB10053 NC_005027.1 5423854 5425344 D hypothetical protein 5423854..5425344 Rhodopirellula baltica SH 1 1796454 NP_869221.1 CDS RB10055 NC_005027.1 5425334 5426716 R best DB hits: BLAST: gb:AAC46093.1; (U81973) Cap5J [Staphylococcus aureus]; E=0.32; Cap5J protein- transmembraneprotein complement(5425334..5426716) Rhodopirellula baltica SH 1 1795818 NP_869222.1 CDS RB10060 NC_005027.1 5426810 5427139 D best DB hits: BLAST: pir:A70799; probable transcriptional regulator Rv3744 -; E=4e-07 pir:A75601; transcription repressor SmtB - Deinococcus radiodurans; E=8e-07 swissprot:P37374; CADF_STAAU CADMIUM EFFLUX SYSTEM ACCESSORY; E=1e-06 COG: Rv3744; COG0640 Predicted transcriptional regulators; E=5e-08 PFAM: PF01022; Bacterial regulatory protein, arsR f; E=3.5e-19; transcriptional regulator 5426810..5427139 Rhodopirellula baltica SH 1 1793453 NP_869223.1 CDS RB10061 NC_005027.1 5427236 5428342 D best DB hits: BLAST: ddbj:BAB04085.1; (AP001508) BH0366~unknown conserved protein in; E=1e-09 embl:CAC28817.1; (AL513466) conserved hypothetical protein; E=7e-08 pir:D82449; conserved hypothetical protein VCA0527 [imported] -; E=3e-07 COG: BH0366; COG0523 GTPases (G3E family); E=9e-11 sll1079; COG0378 Urease/hydrogenase-associated predicted GTPases; E=0.004 CT418; COG0536 Predicted GTPase; E=0.004 PFAM: PF01443; Viral (Superfamily 1) RNA hel; E=0.53 PF01583; Adenylylsulfate kinase; E=0.7 PF02223; Thymidylate kinase; E=0.0067; hypothetical protein 5427236..5428342 Rhodopirellula baltica SH 1 1794214 NP_869224.1 CDS RB10062 NC_005027.1 5428367 5429641 R catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate; hydroxyglutarate oxidase complement(5428367..5429641) Rhodopirellula baltica SH 1 1796285 NP_869225.1 CDS RB10065 NC_005027.1 5429784 5431103 D best DB hits: BLAST: ddbj:BAA82692.1; (AB013492) ORF14 [Bacillus halodurans] -----; E=4e-20 pir:D83132; hypothetical protein PA4108 [imported] - Pseudomonas; E=4e-17 pir:E71268; conserved hypothetical protein TP0912 - syphilis; E=4e-15 COG: BH0008; COG2206 HD-GYP domain; E=4e-21; phosphohydrolase involved in signal transduction 5429784..5431103 Rhodopirellula baltica SH 1 1794629 NP_869226.1 CDS RB10067 NC_005027.1 5431121 5433625 R hypothetical protein complement(5431121..5433625) Rhodopirellula baltica SH 1 1792139 NP_869227.1 CDS RB10069 NC_005027.1 5433573 5434046 R lipoprotein complement(5433573..5434046) Rhodopirellula baltica SH 1 1792495 NP_869228.1 CDS RB10074 NC_005027.1 5434250 5435071 R best DB hits: BLAST: pir:G69742; hypothetical protein ybaJ - Bacillus subtilis -----; E=7e-13 pir:E83313; conserved hypothetical protein PA2650 [imported] -; E=9e-12 pir:S76919; hypothetical protein - Synechocystis sp. (strain PCC; E=6e-04 COG: BS_ybaJ; COG0500 SAM-dependent methyltransferases; E=7e-14 XF2471; COG2227; E=0.004; SAM-dependent methyltransferase complement(5434250..5435071) Rhodopirellula baltica SH 1 1794512 NP_869229.1 CDS RB10075 NC_005027.1 5435202 5436659 D hypothetical protein 5435202..5436659 Rhodopirellula baltica SH 1 1793488 NP_869230.1 CDS RB10077 NC_005027.1 5436817 5437083 D lipoprotein 5436817..5437083 Rhodopirellula baltica SH 1 1796548 NP_869231.1 CDS RB10078 NC_005027.1 5437154 5439220 R best DB hits: BLAST: pir:G82627; hypothetical protein XF1887 [imported] - Xylella; E=1e-40 PFAM: PF00949; Flavivirus helicase (NS3); E=0.44 PF00089; Trypsin; E=0.59 PF00571; CBS domain; E=0.31; hypothetical protein complement(5437154..5439220) Rhodopirellula baltica SH 1 1796555 NP_869232.1 CDS RB10081 NC_005027.1 5439311 5441353 R best DB hits: BLAST: pir:G69815; ABC transporter (ATP-binding protein) homolog ygaD -; E=6e-66 gb:AAG49002.1; (AY013246) ABC transporter [Hordeum; E=4e-63 pir:A75590; ABC transporter ATP-binding protein - Deinococcus; E=6e-63 COG: BS_ygaD; COG1132 ABC-type multidrug/protein/lipid transport system,; E=6e-67 PFAM: PF00664; ABC transporter transmembrane re; E=8.5e-30 PF02463; SMC domain N terminal domain; E=0.53 PF01202; Shikimate kinase; E=0.019; ABC transporter ATP-binding protein complement(5439311..5441353) Rhodopirellula baltica SH 1 1794357 NP_869233.1 CDS RB10085 NC_005027.1 5441648 5442409 D hypothetical protein 5441648..5442409 Rhodopirellula baltica SH 1 1791388 NP_869234.2 CDS RB10088 NC_005027.1 5442529 5443422 D best DB hits: BLAST: ddbj:BAB07544.1; (AP001520) BH3825~unknown conserved protein; E=7e-27 swissprot:P39645; YWFI_BACSU HYPOTHETICAL 29.5 KD PROTEIN IN; E=5e-24 gb:AAG20186.1; (AE005095) Vng2021c [Halobacterium sp. NRC-1]; E=7e-24 COG: BH3825; COG3253 Uncharacterized ACR; E=7e-28; heme peroxidase 5442529..5443422 Rhodopirellula baltica SH 1 1794706 NP_869235.1 CDS RB10089 NC_005027.1 5443485 5444303 R best DB hits: BLAST: embl:CAB66289.1; (AL136519) hypothetical protein SCC57A.21c.; E=3e-19 swissprot:P42419; IOLI_BACSU IOLI PROTEIN ----- pir: A69646; E=4e-07 ddbj:BAB06034.1; (AP001515) myo-inositol catabolism [Bacillus; E=1e-06 COG: BS_iolI; COG1082 Predicted endonucleases; E=4e-08 PFAM: PF01542; Hepatitis C virus core protei; E=0.23; hypothetical protein complement(5443485..5444303) Rhodopirellula baltica SH 1 1794523 NP_869236.1 CDS RB10092 NC_005027.1 5444432 5445460 D best DB hits: BLAST: ref:XP_002773.1; CGI-105 protein [Homo sapiens]; E=4e-56 gb:AAD34100.1; AF151863_1 (AF151863) CGI-105 protein [Homo; E=6e-56 gb:AAF55945.1; (AE003737) CG6028 gene product [Drosophila; E=3e-54 COG: BH2000; COG0179 2-keto-4-pentenoate; E=1e-45 PFAM: PF01557; Fumarylacetoacetate (FAA) hydro; E=5.1e-83; 2-keto-4-pentenoate hydratase 5444432..5445460 Rhodopirellula baltica SH 1 1791617 NP_869237.1 CDS RB10096 NC_005027.1 5445866 5446891 R best DB hits: BLAST: gb:AAC09305.1; (AF047044) transposase [Nostoc sp. PCC; E=2e-41 pir:A32816; hypothetical protein, 33K - Pseudomonas atlantica; E=7e-35 pir:B81886; probable transposase NMA1185 [imported] - Neisseria; E=1e-30 PFAM: PF01548; Transposase; E=2.2e-05 PF02371; Transposase IS116/IS110/IS902; E=1.3e-25; transposase complement(5445866..5446891) Rhodopirellula baltica SH 1 1792241 NP_869238.1 CDS RB10097 NC_005027.1 5446658 5447284 D hypothetical protein 5446658..5447284 Rhodopirellula baltica SH 1 1796802 NP_869239.1 CDS RB10098 NC_005027.1 5447310 5447453 D hypothetical protein 5447310..5447453 Rhodopirellula baltica SH 1 1794083 NP_869240.1 CDS RB10099 NC_005027.1 5447566 5448546 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein 5447566..5448546 Rhodopirellula baltica SH 1 1794847 NP_869241.1 CDS RB10100 NC_005027.1 5448543 5449025 D lipoprotein 5448543..5449025 Rhodopirellula baltica SH 1 1791211 NP_869242.1 CDS RB10103 NC_005027.1 5449143 5450834 D PMID: 10888605 best DB hits: BLAST: gb:AAF81717.1; AF252281_1 (AF252281) Kelch-like 1 protein [Mus; E=2e-09 gb:AAD39007.1; AF156857_1 (AF156857) actin-binding protein [Homo; E=3e-09 gb:AAK00278.1; AF285178_1 (AF285178) actin-binding protein MIPP; E=3e-08 COG: HI0148; COG3055 Uncharacterized BCR; E=9e-06 PFAM: PF01344; Kelch motif; E=0.0021; hypothetical protein 5449143..5450834 Rhodopirellula baltica SH 1 1793128 NP_869243.1 CDS RB10105 NC_005027.1 5450855 5451202 R hypothetical protein complement(5450855..5451202) Rhodopirellula baltica SH 1 1793060 NP_869244.1 CDS cutA NC_005027.1 5451244 5451624 R best DB hits: BLAST: gb:AAF48350.1; (AE003495) CG11590 gene product [Drosophila; E=7e-12 gb:AAB89277.1; (AE000966) periplasmic divalent cation tolerance; E=2e-11 pir:C69068; divalent cation tolerance protein - Methanobacterium; E=2e-11 COG: AF1978; COG1324 Uncharacterized protein involved in tolerance to; E=2e-12; periplasmic divalent cation tolerance protein (cutA) complement(5451244..5451624) Rhodopirellula baltica SH 1 1790819 NP_869245.1 CDS RB10107 NC_005027.1 5451724 5451876 R hypothetical protein complement(5451724..5451876) Rhodopirellula baltica SH 1 1796459 NP_869246.1 CDS dnaN NC_005027.1 5451913 5453247 D PMID: 2540413 best DB hits: BLAST: swissprot:P13455; DP3B_PSEPU DNA POLYMERASE III, BETA CHAIN; E=1e-31 pir:C81713; DNA polymerase III, beta chain TC0347 [imported] -; E=1e-29 pir:E71559; probable DNA pol III (beta chain) - Chlamydia; E=1e-29 COG: CT075; COG0592 DNA polymerase III beta subunit; E=1e-30 PFAM: PF00712; DNA polymerase III beta subun; E=7.1e-16 PF02767; DNA polymerase III beta subun; E=2.4e-12 PF02768; DNA polymerase III beta subun; E=1e-10; DNA polymerase III, beta chain 5451913..5453247 Rhodopirellula baltica SH 1 1796408 NP_869247.1 CDS RB10109 NC_005027.1 5453244 5453639 D best DB hits: BLAST: pir:D72328; hypothetical protein - Thermotoga maritima (strain MSB8); E=0.18; hypothetical protein 5453244..5453639 Rhodopirellula baltica SH 1 1796612 NP_869248.1 CDS hisF NC_005027.1 5453942 5454730 D PMID: 2664449 PMID: 3062174 PMID: 8494895 best DB hits: BLAST: swissprot:P26721; HIS6_AZOBR HISF PROTEIN (CYCLASE) ----- pir:; E=6e-87 swissprot:O66567; HIS6_AQUAE HISF PROTEIN (CYCLASE) ----- pir:; E=1e-84 pir:H83002; imidazoleglycerol-phosphate synthase, cyclase subunit; E=2e-84 COG: aq_181; COG0107 Imidazoleglycerol-phosphate synthase; E=1e-85 PFAM: PF01791; Deoxyribose-phosphate aldolase; E=0.43 PF00977; Histidine biosynthesis protein; E=1.9e-135; imidazole glycerol phosphate synthase subunit HisF 5453942..5454730 Rhodopirellula baltica SH 1 1794677 NP_869249.1 CDS purH NC_005027.1 5454845 5456416 D PMID: 3036807 best DB hits: BLAST: swissprot:P12048; PUR9_BACSU BIFUNCTIONAL PURINE BIOSYNTHESIS; E=1e-125 ddbj:BAB04352.1; (AP001509); E=1e-124 gb:AAF33520.1; (AF170176) Salmonella typhimurium; E=1e-118 COG: BS_purH; COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only; E=1e-126 purH; COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP; E=1e-119 HI0887; COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only; E=1e-118 PFAM: PF02142; MGS-like domain; E=2.2e-46 PF01808; AICARFT/IMPCHase bienzyme; E=1.3e-113; bifunctional purine biosynthesis protein purH 5454845..5456416 Rhodopirellula baltica SH 1 1795643 NP_869250.1 CDS trpC NC_005027.1 5456435 5457214 D PMID: 1896020 PMID: 7007653 PMID: 6355484 best DB hits: BLAST: swissprot:P26938; TRPC_AZOBR INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE; E=6e-55 swissprot:P94327; TRPC_BRAJA INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE; E=3e-52 swissprot:Q9ZFA7; TRPC_RHOSH INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE; E=2e-51 COG: XF0213; COG0134 Indole-3-glycerol phosphate synthase; E=5e-51 PFAM: PF00218; Indole-3-glycerol phosphate synthase; E=2.6e-111; indole-3-glycerol phosphate synthase 5456435..5457214 Rhodopirellula baltica SH 1 1794165 NP_869251.1 CDS RB10115 NC_005027.1 5457222 5457395 D hypothetical protein 5457222..5457395 Rhodopirellula baltica SH 1 1794000 NP_869252.1 CDS arsA NC_005027.1 5457531 5459000 D PMID: 7910580 PMID: 1572648 best DB hits: BLAST: embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=4e-61 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=4e-61 pdb:1E2S; P Chain P, Crystal Structure Of An Arylsulfatase A; E=4e-60 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=5e-33 PFAM: PF00884; Sulfatase; E=3.7e-106; arylsulfatase 5457531..5459000 Rhodopirellula baltica SH 1 1795188 NP_869253.1 CDS atsG NC_005027.1 5458976 5460400 D PMID: 10950929 PMID: 7910580 best DB hits: BLAST: pir:F70837; probable sulfatase (EC 3.1.6.-) atsG - Mycobacterium; E=9e-28 gb:AAG41945.1; AF304053_1 (AF304053) heparan N-sulfatase [Mus; E=5e-25 gb:AAF29467.1; (AF156255) N-sulfoglucosamine sulfohydrolase [Mus; E=6e-25 COG: Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=8e-29 TM1703; COG1368 Phosphoglycerol transferase and related proteins,; E=0.008 PFAM: PF00884; Sulfatase; E=4e-22; sulfatase atsG 5458976..5460400 Rhodopirellula baltica SH 1 1793085 NP_869254.1 CDS pknB NC_005027.1 5460423 5462723 R best DB hits: BLAST: swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=9e-38 pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=3e-37 ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=7e-37 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=2e-38 PFAM: PF00069; Protein kinase domain; E=2.1e-52; serine/threonine-protein kinase pknB complement(5460423..5462723) Rhodopirellula baltica SH 1 1796394 NP_869255.1 CDS rpoE NC_005027.1 5462708 5463364 R PMID: 7768826 PMID: 7889934 PMID: 7889935 best DB hits: BLAST: pir:H82073; RNA polymerase sigma-E factor VC2467 [imported] - Vibrio; E=1e-05 swissprot:P44790; RPOE_HAEIN RNA POLYMERASE SIGMA-E FACTOR; E=9e-05 pir:C82583; RNA polymerase sigma-H factor XF2239 [imported] -; E=3e-04 COG: VC2467; COG1595 DNA-directed RNA polymerase specialized sigma; E=1e-06 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=0.0054 PF00140; Sigma-70 factor; E=2.7e-05; RNA polymerase sigma-E factor complement(5462708..5463364) Rhodopirellula baltica SH 1 1792873 NP_869256.1 CDS RB10123 NC_005027.1 5463443 5463661 D hypothetical protein 5463443..5463661 Rhodopirellula baltica SH 1 1792123 NP_869257.1 CDS RB10124 NC_005027.1 5463645 5465093 D best DB hits: BLAST: pir:A82580; polyvinylalcohol dehydrogenase XF2259 [imported] -; E=0.003 pir:H69064; serinethreonine protein kinase related protein -; E=0.013 pir:C83171; conserved hypothetical protein PA3800 [imported] -; E=0.14 COG: XF2259; COG1520 Uncharacterized proteins of WD40-like repeat family; E=3e-04 PFAM: PF01011; PQQ enzyme repeat; E=0.0033; polyvinylalcohol dehydrogenase 5463645..5465093 Rhodopirellula baltica SH 1 1795900 NP_869258.1 CDS RB10125 NC_005027.1 5465077 5465187 D hypothetical protein 5465077..5465187 Rhodopirellula baltica SH 1 1792014 NP_869259.1 CDS RB10126 NC_005027.1 5465210 5465341 D hypothetical protein 5465210..5465341 Rhodopirellula baltica SH 1 1794440 NP_869260.1 CDS RB10127 NC_005027.1 5465320 5466726 R PMID: 8700860 PMID: 3399393 best DB hits: BLAST: gb:AAC59865.1; (U37373) up-regulated by thyroid hormone in; E=9e-60 ddbj:BAB14717.1; (AK023902) unnamed protein product [Homo; E=6e-59 pir:A58519; hypothetical 345 protein - Streptomyces coelicolor; E=5e-42 COG: slr1608; COG2133 Glucose/sorbosone dehydrogenases; E=1e-22; protein up-regulated by thyroid hormone- PQQ-dependent glucose dehydrogenase complement(5465320..5466726) Rhodopirellula baltica SH 1 1796874 NP_869261.1 CDS mip NC_005027.1 5466713 5467429 R PMID: 9350870 PMID: 2925252 PMID: 1379319 PMID: 7516906 best DB hits: BLAST: gb:AAC45700.1; (U92214) macrophage infectivity potentiator; E=4e-36 gb:AAC45696.1; (U92229) macrophage infectivity potentiator; E=4e-35 gb:AAC45668.1; (U91606) macrophage infectivity potentiator; E=5e-35 COG: PA3262; COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1; E=1e-33 PFAM: PF01346; Domain amino terminal to FKBP-type p; E=7.4e-14 PF00254; FKBP-type peptidyl-prolyl cis-trans; E=2e-48; macrophage infectivity potentiator complement(5466713..5467429) Rhodopirellula baltica SH 1 1796086 NP_869262.1 CDS pknH NC_005027.1 5467814 5468908 R best DB hits: BLAST: swissprot:Q11053; PKNH_MYCTU PROBABLE SERINETHREONINE-PROTEIN; E=3e-35 embl:CAB94054.1; (AL358672) serinethreonine-protein; E=1e-34 embl:CAA10713.1; (AJ132604) hypothetical protein [Lactococcus; E=2e-33 COG: Rv1266c; COG0515 Serine/threonine protein kinases; E=3e-36 PFAM: PF00069; Protein kinase domain; E=7.6e-54; serine/threonine-protein kinase pknH complement(5467814..5468908) Rhodopirellula baltica SH 1 1790901 NP_869263.1 CDS RB10134 NC_005027.1 5468929 5469243 R best DB hits: BLAST: gb:AAK05177.1; AE006340_10 (AE006340) 50S ribosomal protein L21; E=4e-10 pir:F82920; ribosomal protein L21 UU212 [imported] - Ureaplasma; E=3e-11 gb:AAC35614.1; (AF041468) ribosomal protein L21 [Guillardia; E=3e-10 COG: Rv2442c; COG0261 Ribosomal protein L21; E=3e-07 PFAM: PF00829; Ribosomal prokaryotic L21 prot; E=2.2e-36; 50S ribosomal protein L21 complement(5468929..5469243) Rhodopirellula baltica SH 1 1791130 NP_869264.1 CDS RB10135 NC_005027.1 5469167 5469418 R hypothetical protein complement(5469167..5469418) Rhodopirellula baltica SH 1 1790083 NP_869265.1 CDS RB10136 NC_005027.1 5469419 5469577 D hypothetical protein 5469419..5469577 Rhodopirellula baltica SH 1 1789972 NP_869266.1 CDS RB10137 NC_005027.1 5469551 5469772 R hypothetical protein complement(5469551..5469772) Rhodopirellula baltica SH 1 1796130 NP_869267.1 CDS RB10138 NC_005027.1 5469878 5470681 R best DB hits: BLAST: pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=0.018; membrane lipoprotein complement(5469878..5470681) Rhodopirellula baltica SH 1 1791566 NP_869268.1 CDS RB10139 NC_005027.1 5470782 5471021 R hypothetical protein complement(5470782..5471021) Rhodopirellula baltica SH 1 1796471 NP_869269.1 CDS RB10140 NC_005027.1 5471107 5472927 D best DB hits: BLAST: pir:B82127; sulfate permease VC2031 [imported] -; E=1e-89 pir:G83325; probable sulfate transporter PA2563 [imported] -; E=5e-53 ddbj:BAB04133.1; (AP001508) sulfate permease [Bacillus; E=1e-51 COG: VC2031; COG0659 Sulfate permease and related transporters (MFS; E=1e-90 PFAM: PF00916; Sulfate transporter family; E=9.5e-12 PF00955; HCO3- transporter family; E=0.86 PF00916; Sulfate transporter family; E=4.5e-54; sulfate permease 5471107..5472927 Rhodopirellula baltica SH 1 1796261 NP_869270.1 CDS RB10141 NC_005027.1 5472900 5473064 R hypothetical protein complement(5472900..5473064) Rhodopirellula baltica SH 1 1790456 NP_869271.1 CDS RB10142 NC_005027.1 5473137 5474159 D signal peptide 5473137..5474159 Rhodopirellula baltica SH 1 1797204 NP_869272.1 CDS RB10144 NC_005027.1 5474239 5475198 D PMID: 1909424 best DB hits: BLAST: swissprot:P26223; XYNB_BUTFI ENDO-1,4-BETA-XYLANASE B (XYLANASE B); E=2e-18 prf:1718306A; xylanase [Butyrivibrio fibrisolvens]; E=2e-18 gb:AAK04528.1; AE006280_4 (AE006280) sugar hydrolase [Lactococcus; E=1e-17 COG: DR0821_2; COG0657 Acetyl esterase; E=6e-06 DR0165; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; E=0.004 PFAM: PF01738; Dienelactone hydrolase; E=0.81 PF00561; alpha/beta hydrolase fold; E=0.0016; endo-1,4-beta-xylanase B 5474239..5475198 Rhodopirellula baltica SH 1 1796089 NP_869273.1 CDS RB10145 NC_005027.1 5475236 5476630 R signal peptide complement(5475236..5476630) Rhodopirellula baltica SH 1 1797064 NP_869274.1 CDS RB10146 NC_005027.1 5476557 5476874 R hypothetical protein complement(5476557..5476874) Rhodopirellula baltica SH 1 1792655 NP_869275.1 CDS RB10148 NC_005027.1 5476994 5477758 R signal peptide complement(5476994..5477758) Rhodopirellula baltica SH 1 1794333 NP_869276.1 CDS 1959133 NC_005027.1 5477832 5487368 R best DB hits: BLAST: swissprot:P33450; FAT_DROME CADHERIN-RELATED TUMOR SUPPRESSOR; E=0.68 pir:IJFFTM; cadherin-related tumor suppressor precursor - fruit fly; E=0.68 gb:AAF51036.1; (AE003577) ft gene product [Drosophila melanogaster]; E=0.68 PFAM: PF00028; Cadherin domain; E=0.014 PF00801; PKD domain; E=0.0048 PF02101; Ocular albinism type 1 protei; E=0.26; cadherin-related protein complement(5477832..5487368) Rhodopirellula baltica SH 1 1792413 NP_869277.1 CDS RB10157 NC_005027.1 5487365 5487658 R hypothetical protein complement(5487365..5487658) Rhodopirellula baltica SH 1 1793864 NP_869278.1 CDS RB10159 NC_005027.1 5487643 5489772 D best DB hits: PFAM: PF00404; Dockerin type I repeat; E=0.039; dockerin repeat-containing protein 5487643..5489772 Rhodopirellula baltica SH 1 1793528 NP_869279.1 CDS pknB NC_005027.1 5489812 5493105 R PMID: 835671 best DB hits: BLAST: swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=3e-34 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=5e-33 pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=9e-32 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=5e-34 PFAM: PF00069; Protein kinase domain; E=1.3e-46 PF00400; WD domain, G-beta repeat; E=0.00029; serine/threonine-protein kinase pknB complement(5489812..5493105) Rhodopirellula baltica SH 1 1794698 NP_869280.1 CDS RB10164 NC_005027.1 5493115 5493693 R PMID: 12024217 best DB hits: BLAST: pir:T02748; hypothetical protein R31180_1 - human ----- gb:; E=0.38; sigma factor complement(5493115..5493693) Rhodopirellula baltica SH 1 1795457 NP_869281.1 CDS RB10165 NC_005027.1 5493761 5496907 R PMID: 7836292 best DB hits: BLAST: gb:AAA65703.1; (U12976) polyhydroxyalkanoate depolymerase; E=0.16 swissprot:P52090; PHA1_PSELE POLY(3-HYDROXYALKANOATE) DEPOLYMERASE; E=0.53 PFAM: PF01841; Transglutaminase-like superfam; E=0.00014; polyhydroxyalkanoate depolymerase complement(5493761..5496907) Rhodopirellula baltica SH 1 1795437 NP_869282.1 CDS RB10167 NC_005027.1 5496917 5497096 R hypothetical protein complement(5496917..5497096) Rhodopirellula baltica SH 1 1795236 NP_869283.1 CDS RB10168 NC_005027.1 5497002 5497235 R hypothetical protein complement(5497002..5497235) Rhodopirellula baltica SH 1 1795157 NP_869284.1 CDS cysM NC_005027.1 5497260 5498231 D PMID: 2188958 best DB hits: BLAST: swissprot:P16703; CYSM_ECOLI CYSTEINE SYNTHASE B (O-ACETYLSERINE; E=1e-30 pir:D82758; cysteine synthase XF0831 [imported] - Xylella fastidiosa; E=1e-30 swissprot:P95230; CYSK_MYCTU CYSTEINE SYNTHASE A (O-ACETYLSERINE; E=2e-30 COG: cysM; COG0031 Cysteine synthase; E=1e-31 PFAM: PF00291; Pyridoxal-phosphate dependent enzyme; E=5.9e-51; cysteine synthase B 5497260..5498231 Rhodopirellula baltica SH 1 1792293 NP_869285.1 CDS RB10172 NC_005027.1 5498330 5499799 R PMID: 9369242 best DB hits: BLAST: gb:AAA64636.1; (U07235) aldehyde dehydrogenase [Mus musculus]; E=1e-163 gb:AAA51693.1; (M20456) aldehyde dehydrogenase [Homo sapiens]; E=1e-163 pir:DEHUE2; aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) 2 precursor,; E=1e-162 COG: BH0539; COG1012 NAD-dependent aldehyde dehydrogenases; E=1e-156 PFAM: PF00171; Aldehyde dehydrogenase; E=1.5e-240; aldehyde dehydrogenase complement(5498330..5499799) Rhodopirellula baltica SH 1 1796569 NP_869286.1 CDS RB10175 NC_005027.1 5499953 5501080 R best DB hits: BLAST: pir:E83192; hypothetical protein PA3615 [imported] - Pseudomonas; E=2e-63 embl:CAC01341.1; (AL390975) hypothetical protein [Streptomyces; E=8e-33 pir:C81216; conserved hypothetical protein NMB0283 [imported] -; E=5e-29 COG: PA3615; COG1611 Predicted Rossmann fold nucleotide-binding protein; E=2e-64; hypothetical protein complement(5499953..5501080) Rhodopirellula baltica SH 1 1790836 NP_869287.1 CDS RB10176 NC_005027.1 5500977 5501195 R hypothetical protein complement(5500977..5501195) Rhodopirellula baltica SH 1 1791390 NP_869288.1 CDS RB10177 NC_005027.1 5501183 5502373 D best DB hits: BLAST: pir:A72312; conserved hypothetical protein - Thermotoga maritima; E=4e-47 pir:S74581; hypothetical protein slr1411 - Synechocystis sp. (strain; E=1e-41 pir:E69014; hypothetical protein MTH1109 - Methanobacterium; E=6e-37 COG: TM0964; COG1641 Uncharacterized ACR; E=4e-48 PFAM: PF01969; Protein of unknown function DUF111; E=6.1e-89; hypothetical protein 5501183..5502373 Rhodopirellula baltica SH 1 1796067 NP_869289.1 CDS RB10178 NC_005027.1 5502418 5502570 D hypothetical protein 5502418..5502570 Rhodopirellula baltica SH 1 1790484 NP_869290.1 CDS RB10179 NC_005027.1 5502594 5503865 D hypothetical protein 5502594..5503865 Rhodopirellula baltica SH 1 1797173 NP_869291.1 CDS RB10180 NC_005027.1 5503948 5505756 D best DB hits: BLAST: ddbj:BAB06575.1; (AP001516) peptidase [Bacillus halodurans]; E=1e-133 pir:T44581; thimet oligopeptidase (EC 3.4.24.15) [imported] -; E=1e-133 swissprot:O31605; PEPF_BACSU OLIGOENDOPEPTIDASE F HOMOLOG -----; E=1e-133 COG: BH2856; COG1164 Oligoendopeptidase F; E=1e-134 PFAM: PF01432; Peptidase M3; E=2.5e-94; peptidase 5503948..5505756 Rhodopirellula baltica SH 1 1792923 NP_869292.1 CDS rbsA NC_005027.1 5505633 5507300 D PMID: 7921236 best DB hits: BLAST: swissprot:P36947; RBSA_BACSU RIBOSE TRANSPORT ATP-BINDING PROTEIN; E=4e-92 embl:CAB66285.1; (AL136519) ABC transporter protein, ATP binding; E=2e-90 gb:AAK05735.1; AE006394_5 (AE006394) ribose ABC transporter ATP; E=1e-89 COG: BS_rbsA; COG1129 ABC-type sugar (aldose) transport system, ATPase; E=4e-93 PFAM: PF02239; Cytochrome D1 heme domain; E=0.31 PF00005; ABC transporter; E=3e-50; ribose transport ATP-binding protein rbsA 5505633..5507300 Rhodopirellula baltica SH 1 1796056 NP_869293.1 CDS RB10182 NC_005027.1 5507302 5507613 R hypothetical protein complement(5507302..5507613) Rhodopirellula baltica SH 1 1796970 NP_869294.1 CDS RB10184 NC_005027.1 5507610 5507891 R hypothetical protein complement(5507610..5507891) Rhodopirellula baltica SH 1 1795326 NP_869295.1 CDS upp NC_005027.1 5508081 5508716 R PMID: 7798145 best DB hits: BLAST: ddbj:BAB07483.1; (AP001519) uracil phosphoribosyltransferase; E=8e-45 pir:T48896; uracil phosphoribosyltransferase (EC 2.4.2.9) upp; E=3e-43 swissprot:P39149; UPP_BACSU URACIL PHOSPHORIBOSYLTRANSFERASE (UMP; E=8e-42 COG: BH3764; COG0035 Uracil phosphoribosyltransferase; E=7e-46 PFAM: PF00156; Phosphoribosyl transferase doma; E=6.1e-05; uracil phosphoribosyltransferase complement(5508081..5508716) Rhodopirellula baltica SH 1 1794735 NP_869296.1 CDS pyrC NC_005027.1 5508840 5510252 R Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase complement(5508840..5510252) Rhodopirellula baltica SH 1 1792783 NP_869297.1 CDS RB10194 NC_005027.1 5510280 5510453 R hypothetical protein complement(5510280..5510453) Rhodopirellula baltica SH 1 1790025 NP_869298.1 CDS RB10195 NC_005027.1 5510484 5511278 R best DB hits: BLAST: pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=0.004 embl:CAB94634.1; (AL359215) secreted glycosyl hydrolase.; E=0.013 ddbj:BAB04428.1; (AP001509) BH0709~unknown conserved protein in; E=0.39; hypothetical protein complement(5510484..5511278) Rhodopirellula baltica SH 1 1796911 NP_869299.1 CDS RB10196 NC_005027.1 5511281 5512591 R best DB hits: BLAST: pir:S76571; hypothetical protein - Synechocystis sp. (strain PCC; E=1e-06 pir:C72255; hypothetical protein - Thermotoga maritima (strain MSB8); E=5e-05 swissprot:P38527; RHO_THEMA TRANSCRIPTION TERMINATION FACTOR RHO; E=0.71 COG: sll0185; COG3330 Uncharacterized BCR; E=1e-07; hypothetical protein complement(5511281..5512591) Rhodopirellula baltica SH 1 1796464 NP_869300.1 CDS RB10199 NC_005027.1 5512584 5512721 R hypothetical protein complement(5512584..5512721) Rhodopirellula baltica SH 1 1796432 NP_869301.1 CDS RB10200 NC_005027.1 5512786 5513028 R hypothetical protein complement(5512786..5513028) Rhodopirellula baltica SH 1 1791494 NP_869302.1 CDS RB10202 NC_005027.1 5512988 5513224 D hypothetical protein 5512988..5513224 Rhodopirellula baltica SH 1 1792628 NP_869303.1 CDS RB10204 NC_005027.1 5513405 5513851 D hypothetical protein 5513405..5513851 Rhodopirellula baltica SH 1 1796352 NP_869304.1 CDS atpB NC_005027.1 5513878 5514927 D PMID: 2902844 best DB hits: BLAST: swissprot:P15012; ATP6_RHORU ATP SYNTHASE A CHAIN (PROTEIN 6); E=3e-09 gb:AAD12651.1; (U02970) H(+)-transporting ATPase [Prototheca; E=1e-08 gb:AAF24787.1; U17009_19 (U17009) ATP synthase F0 subunit 6; E=6e-08 COG: XF1149; COG0356 F0F1-type ATP synthase a subunit; E=5e-07 PFAM: PF00119; ATP synthase A chain; E=3.3e-12; protein ATP synthase A chain 5513878..5514927 Rhodopirellula baltica SH 1 1790743 NP_869305.1 CDS RB10208 NC_005027.1 5514957 5515097 D hypothetical protein 5514957..5515097 Rhodopirellula baltica SH 1 1796925 NP_869306.1 CDS atpE NC_005027.1 5515135 5515467 D PMID: 1448623 PMID: 1328152 best DB hits: BLAST: pir:I39786; H+-transporting ATP synthase (EC 3.6.1.34) C chain -; E=0.076 pir:JN0362; H+-transporting ATP synthase (EC 3.6.1.34) lipid-binding; E=0.36 swissprot:P26682; ATPL_ENTHR ATP SYNTHASE C CHAIN (LIPID-BINDING; E=0.38 PFAM: PF00137; ATP synthase subunit C; E=7.6e-07; H+-transporting ATP synthase C chain 5515135..5515467 Rhodopirellula baltica SH 1 1790923 NP_869307.1 CDS atpF NC_005027.1 5515421 5516206 D PMID: 2521483 best DB hits: BLAST: swissprot:P20601; ATPF_BACME ATP SYNTHASE B CHAIN ----- pir:; E=7e-12 ddbj:BAB07477.1; (AP001519) ATP synthase subunit b [Bacillus; E=7e-11 gb:AAF22494.1; AF098522_4 (AF098522) F1F0-ATPase subunit b; E=1e-09 COG: BH3758; COG0711 F0F1-type ATP synthase b subunit; E=6e-12 PFAM: PF00430; ATP synthase B/B' CF(0); E=1.7e-28; protein ATP synthase B chain 5515421..5516206 Rhodopirellula baltica SH 1 1791780 NP_869308.1 CDS atpD NC_005027.1 5516217 5516900 D PMID: 8363578 best DB hits: BLAST: ddbj:BAA23685.1; (AB006151) proton-translocating ATPase, delta; E=7e-14 gb:AAC64903.1; (AF008185) oligomycin sensitivity conferring; E=2e-12 pir:S36964; H+-transporting ATP synthase (EC 3.6.1.34) delta chain -; E=3e-12 COG: sll1325; COG0712 F0F1-type ATP synthase delta subunit (mitochondrial; E=6e-13 Rv1307_2; COG0712 F0F1-type ATP synthase delta subunit; E=6e-05 HI0482; COG0712 F0F1-type ATP synthase delta subunit (mitochondrial; E=6e-04 PFAM: PF00213; ATP synthase delta (OSCP) subunit; E=1e-33; ATP synthase subunit delta 5516217..5516900 Rhodopirellula baltica SH 1 1794931 NP_869309.1 CDS atpA NC_005027.1 5516975 5518498 D produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha 5516975..5518498 Rhodopirellula baltica SH 1 1793842 NP_869310.1 CDS atpG NC_005027.1 5518520 5519410 D PMID: 1833620,7961438 best DB hits: BLAST: gb:AAG48362.1; AF330160_9 (AF330160) ATP synthase gamma subunit; E=1e-33 pir:C69592; H+-transporting ATP synthase (EC 3.6.1.34) gamma chain -; E=1e-33 swissprot:P37810; ATPG_BACSU ATP SYNTHASE GAMMA CHAIN -----; E=4e-33 COG: BS_atpG; COG0224 F0F1-type ATP synthase gamma subunit; E=1e-34 PFAM: PF00231; ATP synthase; E=2.7e-85; ATP synthase gamma subunit 5518520..5519410 Rhodopirellula baltica SH 1 1796003 NP_869311.1 CDS atpB NC_005027.1 5519560 5520999 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta 5519560..5520999 Rhodopirellula baltica SH 1 1792043 NP_869312.1 CDS atpE NC_005027.1 5521003 5521389 D PMID: 2878921 PMID: 1533602 best DB hits: BLAST: gb:AAC35683.1; (AF041468) ATP synthase CF1 subunit e [Guillardia; E=8e-10 gb:AAF13019.1; AF022186_193 (AF022186) unknown; ATP synthase CF1; E=1e-09 swissprot:P06542; ATPE_ANASP ATP SYNTHASE EPSILON CHAIN -----; E=3e-09 COG: slr1330; COG0355 F0F1-type ATP synthase epsilon subunit; E=2e-06 atpC; COG0355 F0F1-type ATP synthase epsilon subunit (mitochondrial; E=0.008 PFAM: PF02823; ATP synthase, Delta/Epsilon cha; E=2.3e-16; ATP synthase CF1 subunit e 5521003..5521389 Rhodopirellula baltica SH 1 1793344 NP_869313.1 CDS RB10220 NC_005027.1 5521409 5521615 R hypothetical protein complement(5521409..5521615) Rhodopirellula baltica SH 1 1796705 NP_869314.1 CDS RB10221 NC_005027.1 5521594 5522802 D PMID: 8905231 best DB hits: BLAST: pir:S76765; hypothetical protein - Synechocystis sp. (strain PCC; E=2e-12 pir:T51140; disease resistance protein RPS4 [imported] - Arabidopsis; E=0.13 pir:T51141; disease resistance protein rps4 [imported] - Arabidopsis; E=0.13; disease resistance protein 5521594..5522802 Rhodopirellula baltica SH 1 1790332 NP_869315.1 CDS RB10223 NC_005027.1 5522883 5523362 D hypothetical protein 5522883..5523362 Rhodopirellula baltica SH 1 1795572 NP_869316.1 CDS RB10224 NC_005027.1 5523429 5524040 D hypothetical protein 5523429..5524040 Rhodopirellula baltica SH 1 1791604 NP_869317.1 CDS RB10226 NC_005027.1 5524018 5525178 D PMID: 9687406 best DB hits: BLAST: embl:CAB61226.1; (Y17305) hypothetical protein [Bacillus; E=0.13; hypothetical protein 5524018..5525178 Rhodopirellula baltica SH 1 1794992 NP_869318.1 CDS hofB NC_005027.1 5525241 5526581 R PMID: 9537320 best DB hits: BLAST: pir:B70428; general secretion pathway protein E - Aquifex aeolicus; E=7e-21 pir:C75333; general secretion pathway protein E - Deinococcus; E=6e-19 pir:C83313; probable type II secretion protein PA2677 [imported] -; E=1e-18 COG: aq_1474; COG2804 Predicted ATPases involved in pili biogenesis, PilB; E=6e-22 PFAM: PF00437; Bacterial type II secretion system p; E=0.00098; general secretion pathway protein E complement(5525241..5526581) Rhodopirellula baltica SH 1 1796444 NP_869319.1 CDS pilT NC_005027.1 5526582 5527784 R PMID: 8100347 PMID: 1676385 best DB hits: BLAST: pir:F82321; twitching motility protein PilT VC0462 [imported] -; E=2e-65 pir:C70365; twitching motility protein PilT - Aquifex aeolicus; E=1e-63 swissprot:P24559; PILT_PSEAE TWITCHING MOBILITY PROTEIN -----; E=3e-61 COG: VC0462; COG2805 Predicted ATPases involved in pili biogenesis, PilT; E=1e-66 XF1517; COG2804 Predicted ATPases involved in pili biogenesis, PilB; E=2e-22 PFAM: PF00155; Aminotransferase class-I; E=0.3 PF00448; SRP54-type protein, GTPase do; E=0.32 PF00437; Bacterial type II secretion s; E=1.5e-34; twitching motility protein PilT complement(5526582..5527784) Rhodopirellula baltica SH 1 1792510 NP_869320.1 CDS pyn NC_005027.1 5528046 5529317 D PMID: 8987664 PMID: 9817849 PMID: 8987664 best DB hits: BLAST: pdb:1BRW; B Chain B, The Crystal Structure Of Pyrimidine; E=3e-70 swissprot:P77836; PDP_BACST PYRIMIDINE-NUCLEOSIDE PHOSPHORYLASE; E=3e-69 swissprot:O53366; DEOA_MYCTU THYMIDINE PHOSPHORYLASE (TDRPASE); E=1e-68 COG: Rv3314c; COG0213 Thymidine phosphorylase; E=1e-69 PFAM: PF02885; Glycosyl transferase,; E=1.4e-15 PF00591; Glycosyl transferase,; E=6.1e-39; pyrimidine-nucleoside phosphorylase (PYNP) 5528046..5529317 Rhodopirellula baltica SH 1 1796184 NP_869321.1 CDS yidJ NC_005027.1 5529398 5530981 D PMID: 10336424 best DB hits: BLAST: gb:AAG58881.1; AE005599_13 (AE005599) sulfatase; E=5e-29 swissprot:P31447; YIDJ_ECOLI SULFATASE YIDJ -----; E=1e-28 pir:E83642; choline sulfatase PA0031 [imported] - Pseudomonas; E=1e-27 COG: yidJ; COG3119 Arylsulfatase A and related enzymes; E=1e-29 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=9e-06 VNG1337C; COG3119 Arylsulfatase A and related enzymes; E=2e-04 PFAM: PF00884; Sulfatase; E=9.3e-36; sulfatase yidj 5529398..5530981 Rhodopirellula baltica SH 1 1794699 NP_869322.1 CDS RB10235 NC_005027.1 5531205 5531750 D best DB hits: BLAST: pir:G83172; hypothetical protein PA3783 [imported] - Pseudomonas; E=9e-28 pir:G69776; conserved hypothetical protein yddQ - Bacillus subtilis; E=9e-15 ddbj:BAB11178.1; (AB007648) gene_id:MKD15.9~pir C72413~similar to; E=2e-13 COG: PA3783; COG1335 Amidases related to nicotinamidase; E=9e-29 TM0133; COG1535 2,3-Dihydro-2,3 dihydroxybenzoate synthase; E=2e-06 AF2151; COG1335 Amidases related to nicotinamidase; E=2e-06 PFAM: PF00857; Isochorismatase; E=5.7e-11; hydrolase 5531205..5531750 Rhodopirellula baltica SH 1 1796202 NP_869323.1 CDS RB10238 NC_005027.1 5531834 5533567 D hypothetical protein 5531834..5533567 Rhodopirellula baltica SH 1 1791917 NP_869324.1 CDS RB10240 NC_005027.1 5533582 5535099 D hypothetical protein 5533582..5535099 Rhodopirellula baltica SH 1 1797194 NP_869325.1 CDS dnaJ NC_005027.1 5535126 5536118 R PMID: 8016869 PMID: 9276481 best DB hits: BLAST: embl:CAA10745.1; (AJ132708) DnaJ1 protein [Anabaena sp.]; E=1e-39 swissprot:P50027; DNJH_SYNY3 DNAJ-LIKE PROTEIN SLR0093 -----; E=1e-39 embl:CAA10739.1; (AJ132704) DnaJ1 protein [Anabaena variabilis]; E=2e-39 COG: slr0093; COG2214 Molecular chaperones, DnaJ class; E=9e-41 TP0217; COG0484 Molecular chaperones (contain C-terminal Zn finger; E=2e-27 XF2233; COG2214 Molecular chaperones, DnaJ class; E=1e-26 PFAM: PF00226; DnaJ domain; E=3.6e-37 PF01556; DnaJ C terminal region; E=0.48; DnaJ1 protein complement(5535126..5536118) Rhodopirellula baltica SH 1 1795013 NP_869326.1 CDS RB10243 NC_005027.1 5536144 5537874 D hypothetical protein 5536144..5537874 Rhodopirellula baltica SH 1 1795110 NP_869327.1 CDS dhlA NC_005027.1 5537951 5538937 D PMID: 3398051 PMID: 2026135 PMID: 8515812 best DB hits: BLAST: pir:C82615; haloalkane dehalogenase XF1965 [imported] - Xylella; E=2e-36 swissprot:Q50600; YJ33_MYCTU HYPOTHETICAL 32.2 KDA PROTEIN RV1833C; E=3e-23 pdb:1BEZ; Haloalkane Dehalogenase Mutant With Trp 175 Replaced; E=3e-19 COG: XF1965; COG0596 Predicted hydrolases or acyltransferases (alpha/beta; E=2e-37 Rv1833c; COG0596 Predicted hydrolases or acyltransferases; E=3e-24 Rv2579; COG0596 Predicted hydrolases or acyltransferases (alpha/beta; E=1e-16 PFAM: PF00561; alpha/beta hydrolase fold; E=3.5e-20; haloalkane dehalogenase 5537951..5538937 Rhodopirellula baltica SH 1 1794013 NP_869328.1 CDS RB10246 NC_005027.1 5538891 5539841 D PMID: 9651254 PMID: 10215859 PMID: 10848995 PMID: 11073907 best DB hits: BLAST: gb:AAG32953.1; (AF032114) unknown [Methylobacterium extorquens]; E=2e-21 pir:D69199; conserved hypothetical protein MTH743 - Methanobacterium; E=6e-18 swissprot:Q57680; Y227_METJA HYPOTHETICAL PROTEIN MJ0227 -----; E=2e-16 COG: MTH743; COG1767 Uncharacterized ACR; E=5e-19 PFAM: PF01874; CitG family; E=1.9e-07; hypothetical protein 5538891..5539841 Rhodopirellula baltica SH 1 1793654 NP_869329.1 CDS htrA NC_005027.1 5539851 5541332 R PMID: 9371463 best DB hits: BLAST: pir:D69109; serine proteinase HtrA - Methanobacterium; E=0.014 embl:CAA72164.1; (Y11304) ORF E0 [Rhodobacter capsulatus]; E=0.018 gb:AAF87931.1; AF163841_10 (AF163841) serine protease; E=0.041 COG: MTH1813; COG0265 Trypsin-like serine proteases, typically; E=0.001 PFAM: PF00595; PDZ domain (Also known as DHR; E=0.0018; serine proteinase HtrA complement(5539851..5541332) Rhodopirellula baltica SH 1 1790577 NP_869330.1 CDS RB10252 NC_005027.1 5541386 5542546 D best DB hits: BLAST: embl:CAA51674.1; (X73149) Nourseothricin acetyltransferase; E=0.069 gb:AAD47630.1; AF156670_1 (AF156670) nourseothricin; E=0.069 pir:E69786; ribosomal-protein-alanine N-acetyltransfer homolog ydiD; E=0.081 COG: BS_ydiD; COG0456 Acetyltransferases; E=0.008 PFAM: PF00583; Acetyltransferase (GNAT) family; E=7.9e-11; nourseothricin acetyltransferase 5541386..5542546 Rhodopirellula baltica SH 1 1793026 NP_869331.1 CDS RB10255 NC_005027.1 5542656 5543669 D PMID: 10952301 best DB hits: BLAST: pir:A82318; conserved hypothetical protein VC0480 [imported] -; E=1e-37 swissprot:O52401; YGGB_EDWIC HYPOTHETICAL 30.6 KDA PROTEIN IN; E=2e-36 pir:B83096; conserved hypothetical protein PA4394 [imported] -; E=2e-31 COG: VC0480; COG0668 Small-conductance mechanosensitive channel; E=1e-38 HI0195.1; COG3264 Small-conductance mechanosensitive channel; E=2e-12 APE1441; COG0668 Small-conductance mechanosensitive channel; E=4e-12 PFAM: PF00924; Uncharacterized protein family UPF00; E=2.7e-52; mechanosensitive ion channel MscS 5542656..5543669 Rhodopirellula baltica SH 1 1793436 NP_869332.1 CDS RB10256 NC_005027.1 5543753 5544559 D hypothetical protein 5543753..5544559 Rhodopirellula baltica SH 1 1792905 NP_869333.1 CDS surE NC_005027.1 5544584 5545453 D catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 5544584..5545453 Rhodopirellula baltica SH 1 1790571 NP_869334.1 CDS csrA NC_005027.1 5545719 5545964 R PMID: 9211896 best DB hits: BLAST: swissprot:Q9WY93; CSRA_THEMA CARBON STORAGE REGULATOR HOMOLOG; E=8e-08 swissprot:P44879; CSRA_HAEIN CARBON STORAGE REGULATOR HOMOLOG; E=1e-07 gb:AAK03372.1; (AE006168) CsrA [Pasteurella multocida]; E=2e-07 COG: TM0251; COG1551 Carbon storage regulator (could also regulate; E=1e-08 PFAM: PF02599; Carbon storage regulator; E=3.6e-16; CsrA_thema carbon storage regulator-like protein complement(5545719..5545964) Rhodopirellula baltica SH 1 1797203 NP_869335.1 CDS RB10263 NC_005027.1 5546162 5546338 R hypothetical protein complement(5546162..5546338) Rhodopirellula baltica SH 1 1792037 NP_869336.1 CDS eIF-2B NC_005027.1 5546370 5547440 R PMID: 10360571 PMID: 9384377 best DB hits: BLAST: swissprot:Q9X013; E2B_THEMA TRANSLATION INITIATION FACTOR; E=4e-73 swissprot:O31662; E2B_BACSU TRANSLATION INITIATION FACTOR; E=1e-68 swissprot:P74497; E2B_SYNY3 TRANSLATION INITIATION FACTOR; E=4e-68 COG: TM0911; COG0182 Translation initiation factor eIF-2B alpha subunit; E=4e-74 aq_2114_2; COG0182 Translation initiation factor eIF-2B alpha; E=5e-59 PH0702; COG0182 Translation initiation factor eIF-2B alpha subunit; E=8e-58 PFAM: PF01144; Coenzyme A transferase; E=0.17 PF01008; Initiation factor 2 subunit family; E=3.7e-112; translation initiation factor eIF-2B complement(5546370..5547440) Rhodopirellula baltica SH 1 1791626 NP_869337.1 CDS RB10266 NC_005027.1 5547471 5549033 R best DB hits: BLAST: ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=7e-09 gb:AAC23913.1; (AF039207) NADH-dependent dehydrogenase homolog; E=3e-07 swissprot:Q54728; YJHC_STRPN HYPOTHETICAL PROTEIN IN NANB 3'REGION; E=5e-06 COG: BH1248; COG0673 Predicted dehydrogenases and related proteins; E=7e-10 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=4.4e-17; NADH-dependent dehydrogenase complement(5547471..5549033) Rhodopirellula baltica SH 1 1794612 NP_869338.1 CDS RB10269 NC_005027.1 5549332 5550216 R best DB hits: BLAST: embl:CAB61608.1; (AL133210) hypothetical protein SCG11A.27c; E=2e-48 embl:CAA98817.1; (Z74285) ORF YDL237w [Saccharomyces cerevisiae]; E=6e-09 gb:AAF40431.1; (AF234680) activity-dependent neuroprotective; E=0.80; secreted protein complement(5549332..5550216) Rhodopirellula baltica SH 1 1795977 NP_869339.1 CDS crtI NC_005027.1 5550356 5551969 R PMID: 8467787 PMID: 7588751 PMID: 8021167 best DB hits: BLAST: pir:S43324; zeta-carotene desaturase - Anabaena sp. (strain PCC; E=2e-82 swissprot:Q02861; CRTI_MYXXA PHYTOENE DEHYDROGENASE (PHYTOENE; E=5e-78 pir:T31463; probable diapophytoene dehydrogenase crtN -; E=5e-67 COG: VNG1684G; COG1233 Phytoene dehydrogenase and related proteins; E=7e-60 PFAM: PF01266; D-amino acid oxidase; E=0.0003 PF01494; FAD binding domain; E=9.7e-07 PF01946; Thi4 family; E=0.0015; phytoene dehydrogenase complement(5550356..5551969) Rhodopirellula baltica SH 1 1794770 NP_869340.1 CDS rnH NC_005027.1 5552071 5552547 R PMID: 1698262 PMID: 1311386 PMID: 6296074 best DB hits: BLAST: pdb:1RBR; Ribonuclease H (E.C.3.1.26.4) Mutant With His 62; E=1e-36 pdb:1RBT; Ribonuclease H (E.C.3.1.26.4) Mutant With Lys 95; E=2e-36 pdb:1RBV; Ribonuclease H (E.C.3.1.26.4) Mutant With Lys 95; E=9e-36 COG: rnhA; COG0328 Ribonuclease HI; E=1e-36 PFAM: PF00075; RNase H; E=9.5e-48; ribonuclease H complement(5552071..5552547) Rhodopirellula baltica SH 1 1791018 NP_869341.1 CDS RB10272 NC_005027.1 5552651 5553475 R best DB hits: BLAST: pir:B82680; pteridine reductase 1 XF1457 [imported] - Xylella; E=4e-27 swissprot:P50161; VER1_ASPPA VERSICOLORIN REDUCTASE (VER-1); E=8e-23 swissprot:Q08632; SDR1_PICAB SHORT-CHAIN TYPE; E=9e-22 COG: XF1457; COG1028 Dehydrogenases with different specificities (related; E=4e-28 PAB1085; COG1028 Dehydrogenases with different specificities; E=1e-20 BH1511; COG1028 Dehydrogenases with different specificities (related; E=2e-19 PFAM: PF00106; short chain dehydrogenase; E=3.1e-32 PF00678; Short chain dehydrogenase/reduct; E=0.0013; pteridine reductase 1 complement(5552651..5553475) Rhodopirellula baltica SH 1 1793516 NP_869342.1 CDS bioB NC_005027.1 5553477 5554556 R catalyzes the formation of biotin from dethiobiotin and sulfur 2 S-adenosyl-L-methionine; biotin synthase complement(5553477..5554556) Rhodopirellula baltica SH 1 1794717 NP_869343.1 CDS RB10276 NC_005027.1 5554594 5555310 R hypothetical protein complement(5554594..5555310) Rhodopirellula baltica SH 1 1790659 NP_869344.1 CDS pykA NC_005027.1 5555414 5556844 D PMID: 9387221 best DB hits: BLAST: ddbj:BAB06882.1; (AP001517) pyruvate kinase [Bacillus halodurans]; E=4e-82 swissprot:P80885; KPYK_BACSU PYRUVATE KINASE (PK) (VEGETATIVE; E=6e-80 swissprot:P51181; KPYK_BACLI PYRUVATE KINASE (PK) ----- pir:; E=1e-79 COG: BH3163_1; COG0469 Pyruvate kinase; E=4e-83 PFAM: PF00478; IMP dehydrogenase / GMP reductase C; E=0.0006 PF00224; Pyruvate kinase, barrel domain; E=9.5e-124 PF02887; Pyruvate kinase, alpha/beta domain; E=1.3e-06; pyruvate kinase 5555414..5556844 Rhodopirellula baltica SH 1 1790317 NP_869345.1 CDS hsp20 NC_005027.1 5557118 5557573 D PMID: 1863771 PMID: 10452954 best DB hits: BLAST: pir:A75436; heat shock protein, HSP20 family - Deinococcus; E=3e-20 pir:F82582; low molecular weight heat shock protein XF2234; E=4e-16 pir:D72385; heat shock protein, class I - Thermotoga maritima; E=2e-15 COG: DR1114; COG0071 Molecular chaperone (small heat shock protein); E=3e-21 PFAM: PF00011; Hsp20/alpha crystallin family; E=3.8e-22; heat shock protein 20 5557118..5557573 Rhodopirellula baltica SH 1 1790048 NP_869346.1 CDS hsp20 NC_005027.1 5557737 5558060 D PMID: 8423161 PMID: 8226695 best DB hits: BLAST: pir:F82582; low molecular weight heat shock protein XF2234; E=1e-11 swissprot:Q06823; SP21_STIAU SPORE PROTEIN SP21 ----- pir:; E=3e-11 embl:CAB99442.1; (AJ276218) HspA protein [Stigmatella aurantiaca]; E=3e-11 COG: XF2234; COG0071 Molecular chaperone (small heat shock protein); E=1e-12 PFAM: PF00011; Hsp20/alpha crystallin family; E=1.1e-20; heat shock protein SP21 5557737..5558060 Rhodopirellula baltica SH 1 1791888 NP_869347.1 CDS RB10286 NC_005027.1 5558011 5558157 R hypothetical protein complement(5558011..5558157) Rhodopirellula baltica SH 1 1796978 NP_869348.1 CDS RB10287 NC_005027.1 5558161 5559072 R PMID: 11481431 best DB hits: BLAST: pir:T36903; probable dihydropicolinate synthase - Streptomyces; E=0.41 gb:AAG18989.1; (AE004999) dihydrodipicolinate synthase; DapA; E=0.42; dihydropicolinate synthase complement(5558161..5559072) Rhodopirellula baltica SH 1 1796174 NP_869349.1 CDS RB10290 NC_005027.1 5559203 5559631 R hypothetical protein complement(5559203..5559631) Rhodopirellula baltica SH 1 1797144 NP_869350.1 CDS RB10292 NC_005027.1 5559646 5561391 D PMID: 10656583; signal peptide 5559646..5561391 Rhodopirellula baltica SH 1 1794776 NP_869351.1 CDS mtdA NC_005027.1 5561501 5562427 R PMID: 8144463 PMID: 9765566 PMID: 11297742 best DB hits: BLAST: swissprot:P55818; MTDA_METEX METHYLENETETRAHYDROFOLATE; E=2e-53 gb:AAD55895.1; AF139593_2 (AF139593) methylene; E=2e-18 gb:AAC27020.1; (AF032114) methylene tetrahydromethanopterin; E=3e-16 PFAM: PF02254; KTN NAD-binding domain; E=0.021 PF00106; short chain dehydrogenase; E=0.00046; MtdA bifunctional protein complement(5561501..5562427) Rhodopirellula baltica SH 1 1797143 NP_869352.1 CDS fae NC_005027.1 5562491 5563081 R best DB hits: BLAST: gb:AAB89943.1; (AE001014) D-arabino 3-hexulose 6-phosphate; E=4e-41 pir:D69063; conserved hypothetical protein MTH1474 -; E=2e-40 gb:AAG32954.1; (AF032114) formaldehyde-activating enzyme; E=1e-37 COG: AF1305_1; COG1795 Uncharacterized archaeal domain; E=4e-42; D-arabino 3-hexulose 6-phosphate formaldehyde lyase (hps-2) complement(5562491..5563081) Rhodopirellula baltica SH 1 1797097 NP_869353.1 CDS RB10299 NC_005027.1 5563036 5564403 D PMID: 9651254 PMID: 10215859 PMID: 10848995 PMID: 11073907 best DB hits: BLAST: gb:AAC27021.1; (AF032114) unknown [Methylobacterium extorquens]; E=0.029 embl:CAB92281.1; (AL356595) hypothetical protein [Streptomyces; E=0.43 pir:C83094; D-alanine--D-alanine ligase PA4410 [imported] -; E=0.62 PFAM: PF00826; Ribosomal L10; E=0.66; hypothetical protein 5563036..5564403 Rhodopirellula baltica SH 1 1796108 NP_869354.1 CDS RB10300 NC_005027.1 5564392 5567523 R best DB hits: BLAST: gb:AAG19252.1; (AE005021) plastocyanin homology; Pcy; E=0.67; signal peptide complement(5564392..5567523) Rhodopirellula baltica SH 1 1797142 NP_869355.1 CDS RB10305 NC_005027.1 5567639 5567959 D PMID: 11474104; hypothetical protein 5567639..5567959 Rhodopirellula baltica SH 1 1797141 NP_869356.1 CDS gly1 NC_005027.1 5568000 5569049 D PMID: 9464392 best DB hits: BLAST: pir:T03500; hypothetical protein - Rhodobacter capsulatus -----; E=1e-70 ddbj:BAA24794.1; (AB001577) low specificity L-threonine aldolase; E=5e-61 gb:AAD42401.1; AF157493_9 (AF157493) low specificity L-threonine; E=2e-59 COG: PA5413; COG2008 Threonine aldolase; E=9e-59; low specificity L-threonine aldolase 5568000..5569049 Rhodopirellula baltica SH 1 1797140 NP_869357.1 CDS RB10308 NC_005027.1 5569131 5570057 D PMID: 9823893 PMID: 10984043 best DB hits: BLAST: pir:A71678; probable response regulatory protein RP237 - Rickettsia; E=2e-21 pir:A82428; sensory boxGGDEF family protein VCA0697 [imported] -; E=6e-21 pir:E83183; probable two-component response regulator PA3702; E=1e-20 COG: VCA0697_3; COG2199 Diguanylate cyclase/phosphodiesterase domain 1; E=6e-22 PFAM: PF00072; Response regulator receiver doma; E=5.4e-17 PF00990; GGDEF domain; E=7.2e-44; response regulatory protein 5569131..5570057 Rhodopirellula baltica SH 1 1797139 NP_869358.1 CDS xylE NC_005027.1 5570064 5571518 R PMID: 9647823 PMID: 9076741 best DB hits: BLAST: ddbj:BAA31873.1; (AB009593) xylose transporter [Tetragenococcus; E=1e-67 embl:CAA96096.1; (Z71474) xylose permease [Bacillus megaterium]; E=5e-60 swissprot:P09098; XYLE_ECOLI D-XYLOSE-PROTON SYMPORTER (D-XYLOSE; E=2e-57 COG: xylE; COG0477 Permeases of the major facilitator superfamily; E=2e-58 PFAM: PF00083; Sugar (and other) transporter; E=1.2e-118; xylose transporter complement(5570064..5571518) Rhodopirellula baltica SH 1 1797138 NP_869359.1 CDS nuoM NC_005027.1 5571523 5572980 R PMID: 7690854 best DB hits: BLAST: pir:H81796; NADH dehydrogenase (ubiquinone) (EC 1.6.5.3) chain M; E=1e-15 pir:E81220; NADH dehydrogenase I, M chain NMB0258 [imported] -; E=4e-15 swissprot:Q9ZCG0; NUOM_RICPR NADH DEHYDROGENASE I CHAIN M; E=3e-14 COG: NMB0258; COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); E=4e-16 PH1431; COG0651 Formate hydrogenlyase subunit 3; E=6e-13 HP1272; COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); E=3e-12 PFAM: PF00361; NADH-Ubiquinone/plastoquinone (co; E=2e-07; NADH dehydrogenase (ubiquinone) chain M complement(5571523..5572980) Rhodopirellula baltica SH 1 1797137 NP_869360.1 CDS ndhF NC_005027.1 5572993 5574402 R PMID: 3035337 best DB hits: BLAST: gb:AAG09461.1; AF217811_11 (AF217811) NADH subunit 5 [Tupaia; E=3e-29 swissprot:P50368; NU5M_SCHCO NADH-UBIQUINONE OXIDOREDUCTASE CHAIN; E=4e-29 embl:CAA50887.1; (X72004) NADH-ubiquinone oxidoreductase subunit; E=1e-28 COG: slr0844; COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L); E=3e-29 PAB1402; COG0651 Formate hydrogenlyase subunit 3; E=4e-17 sll1732; COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L); E=1e-16 PFAM: PF00662; NADH-Ubiquinone oxidoreductase; E=0.41 PF00361; NADH-Ubiquinone/plastoquinone (; E=1.2e-36; NADH subunit 5 complement(5572993..5574402) Rhodopirellula baltica SH 1 1797136 NP_869361.1 CDS RB10314 NC_005027.1 5574399 5577620 R PMID: 9537320 best DB hits: BLAST: pir:G70374; hypothetical protein aq_863 - Aquifex aeolicus -----; E=6e-49 pir:H82182; conserved hypothetical protein VC1582 [imported] - Vibrio; E=8e-46 pir:E69745; hypothetical protein ybcD - Bacillus subtilis -----; E=1e-39 COG: aq_863; COG3002 Uncharacterized BCR; E=6e-50 PFAM: PF02873; UDP-N-acetylenolpyruvoylglucosamine; E=0.038; hypothetical protein complement(5574399..5577620) Rhodopirellula baltica SH 1 1797130 NP_869362.1 CDS RB10319 NC_005027.1 5577574 5577771 D hypothetical protein 5577574..5577771 Rhodopirellula baltica SH 1 1797129 NP_869363.1 CDS RB10322 NC_005027.1 5577911 5579290 D PMID: 10086841 PMID: 10086842 PMID: 10192928 best DB hits: BLAST: ddbj:BAB05639.1; (AP001513) two-component sensor histidine kinase; E=5e-22 swissprot:Q06067; ATOS_ECOLI SENSOR PROTEIN ATOS ----- pir:; E=1e-21 pir:S70528; sensor protein pilS - Myxococcus xanthus ----- gb:; E=2e-21 COG: BH1920; COG0642 Sensory transduction histidine kinases; E=5e-23 PFAM: PF00785; PAC motif; E=0.099 PF00512; His Kinase A (phosphoacceptor) doma; E=7.9e-10 PF02518; Histidine kinase-, DNA gyrase B-, p; E=1.1e-33; two-component sensor histidine kinase 5577911..5579290 Rhodopirellula baltica SH 1 1797133 NP_869364.1 CDS atoC NC_005027.1 5579287 5580654 D PMID: 9278503 PMID: 9097040 PMID: 8346225 best DB hits: BLAST: swissprot:Q06065; ATOC_ECOLI ACETOACETATE METABOLISM REGULATORY; E=6e-93 pir:F71315; probable response regulatory protein (atoC) - syphilis; E=7e-93 gb:AAF33506.1; (AF170176) Salmonella typhimurium transcriptional; E=3e-89 COG: atoC; COG2204 AAA superfamily ATPases with N-terminal receiver; E=5e-94 PFAM: PF00072; Response regulator receiver doma; E=1.5e-34 PF00158; Sigma-54 interaction domain; E=1.2e-133; acetoacetate metabolism regulatory protein atoC 5579287..5580654 Rhodopirellula baltica SH 1 1797132 NP_869365.1 CDS RB10324 NC_005027.1 5580658 5580846 D hypothetical protein 5580658..5580846 Rhodopirellula baltica SH 1 1797083 NP_869366.1 CDS RB10326 NC_005027.1 5580833 5582599 D best DB hits: BLAST: pir:D83631; probable sulfate transporter PA0103 [imported] -; E=6e-41 pir:B70979; hypothetical protein Rv3273 - Mycobacterium tuberculosis; E=2e-37 pir:T36683; probable integral membrane protein - Streptomyces; E=7e-31 COG: PA0103; COG0659 Sulfate permease and related transporters (MFS; E=6e-42 PFAM: PF00916; Sulfate transporter family; E=5.9e-11; sulfate transporter 5580833..5582599 Rhodopirellula baltica SH 1 1797131 NP_869367.1 CDS sui1 NC_005027.1 5582627 5583010 D best DB hits: BLAST: swissprot:O26118; SUI1_METTH PROTEIN TRANSLATION FACTOR SUI1; E=2e-09 swissprot:Q57902; SUI1_METJA PROTEIN TRANSLATION FACTOR SUI1; E=5e-09 pir:H72542; hypothetical protein APE1629 - Aeropyrum pernix (strain; E=7e-09 COG: MTH10; COG0023 Translation initiation factor (SUI1); E=2e-10 PFAM: PF01253; Translation initiation factor SUI1; E=1.8e-12; protein translation factor SUI1-like protein 5582627..5583010 Rhodopirellula baltica SH 1 1797098 NP_869368.1 CDS RB10328 NC_005027.1 5582992 5583675 R PMID: 10567266 PMID: 10086841 best DB hits: BLAST: pir:H75538; conserved hypothetical protein - Deinococcus radiodurans; E=1e-17 ddbj:BAB05098.1; (AP001511) BH1379~unknown conserved protein; E=4e-13 swissprot:P54471; YQFN_BACSU HYPOTHETICAL 23.7 KD PROTEIN IN; E=3e-12 COG: DR0276; COG2384 Predicted SAM-dependent methyltransferase; E=1e-18; SAM-dependent methyltransferase complement(5582992..5583675) Rhodopirellula baltica SH 1 1797125 NP_869369.1 CDS RB10329 NC_005027.1 5583682 5584935 R best DB hits: BLAST: pir:T36501; probable serinethreonine protein kinase - Streptomyces; E=2e-32 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=4e-32 swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=5e-31 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=4e-33 PA5360; COG0745 Response regulators consisting of a CheY-like; E=9e-17 VC0622_4; COG0784 CheY-like receiver domains; E=2e-16 PFAM: PF00072; Response regulator receiver doma; E=6e-29 PF00069; Protein kinase domain; E=6.7e-52; serine/threonine protein kinase complement(5583682..5584935) Rhodopirellula baltica SH 1 1797124 NP_869370.1 CDS RB10330 NC_005027.1 5584932 5587514 R best DB hits: BLAST: pir:S75136; sensory transduction histidine kinase slr2104 -; E=3e-69 pir:E83443; probable sensorresponse regulator hybrid PA1611; E=2e-56 pir:H83132; probable sensorresponse regulator hybrid PA4112; E=1e-52 COG: PA4982; COG0642 Sensory transduction histidine kinases; E=4e-49 PFAM: PF00512; His Kinase A (phosphoacceptor) d; E=1.3e-22 PF02518; Histidine kinase-, DNA gyrase B-; E=8e-46 PF00072; Response regulator receiver doma; E=6.2e-33; sensory transduction histidine kinase complement(5584932..5587514) Rhodopirellula baltica SH 1 1797145 NP_869371.1 CDS RB10332 NC_005027.1 5587518 5587892 R hypothetical protein complement(5587518..5587892) Rhodopirellula baltica SH 1 1797096 NP_869372.1 CDS RB10333 NC_005027.1 5587906 5589567 R best DB hits: BLAST: pir:T42076; protein kinase homolog - Streptomyces coelicolor -----; E=5e-18 pir:T42077; protein kinase homolog - Streptomyces coelicolor -----; E=1e-16 pir:T35491; probable serinethreonine-specific protein kinase pkaF -; E=1e-16 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=3e-15 PFAM: PF00069; Protein kinase domain; E=3.2e-06; protein kinase-like protein complement(5587906..5589567) Rhodopirellula baltica SH 1 1790245 NP_869373.1 CDS uppS NC_005027.1 5589648 5590382 R PMID: 9882662 best DB hits: BLAST: swissprot:O31751; UPPS_BACSU UNDECAPRENYL PYROPHOSPHATE SYNTHETASE; E=4e-51 pir:F82099; undecaprenyl diphosphate synthase VC2256 [imported] -; E=3e-50 gb:AAB08603.1; (U70214) hypothetical protein [Escherichia coli]; E=3e-50 COG: BS_yluA; COG0020 Undecaprenyl pyrophosphate synthase; E=4e-52 PFAM: PF01255; undecaprenyl diphosph; E=2.1e-100; undecaprenyl pyrophosphate synthetase complement(5589648..5590382) Rhodopirellula baltica SH 1 1792561 NP_869374.1 CDS flbA NC_005027.1 5590379 5591839 R PMID: 9748431 PMID: 1699845 best DB hits: BLAST: swissprot:P21296; FLBA_CAUCR FLBA PROTEIN ----- gb: AAC62523.1; E=2e-19 swissprot:P56558; OGT1_RAT UDP-N-ACETYLGLUCOSAMINE--PEPTIDE; E=5e-11 embl:CAA76834.1; (Y17720) SPINDLY protein [Petunia x hybrida]; E=8e-11 COG: aq_2197; COG0457 TPR-repeat-containing proteins; E=2e-09 PFAM: PF00515; TPR Domain; E=5.6e-07; FlbA protein complement(5590379..5591839) Rhodopirellula baltica SH 1 1793449 NP_869375.1 CDS rpdD NC_005027.1 5591839 5593398 R PMID: 2110143 best DB hits: BLAST: swissprot:P56835; RPSD_CHLMU RNA POLYMERASE SIGMA FACTOR RPOD; E=5e-80 swissprot:P18333; RPSD_CHLTR RNA POLYMERASE SIGMA FACTOR RPOD; E=6e-80 pir:RNCW7H; transcription initiation factor sigma 70 - Chlamydia; E=6e-80 COG: CT615; COG0568 DNA-directed RNA polymerase sigma subunits; E=6e-81 PFAM: PF00140; Sigma-70 factor; E=6.7e-109; RNA polymerase sigma factor rpoD complement(5591839..5593398) Rhodopirellula baltica SH 1 1794158 NP_869376.1 CDS RB10341 NC_005027.1 5593416 5593601 D hypothetical protein 5593416..5593601 Rhodopirellula baltica SH 1 1793527 NP_869377.1 CDS RB10342 NC_005027.1 5593621 5593929 R hypothetical protein complement(5593621..5593929) Rhodopirellula baltica SH 1 1796761 NP_869378.1 CDS RB10343 NC_005027.1 5593898 5594059 D hypothetical protein 5593898..5594059 Rhodopirellula baltica SH 1 1795327 NP_869379.1 CDS RB10344 NC_005027.1 5594195 5594752 D hypothetical protein 5594195..5594752 Rhodopirellula baltica SH 1 1796822 NP_869380.1 CDS RB10345 NC_005027.1 5594718 5594879 D hypothetical protein 5594718..5594879 Rhodopirellula baltica SH 1 1790523 NP_869381.1 CDS RB10346 NC_005027.1 5594855 5595682 R best DB hits: BLAST: gb:AAK04327.1; AE006260_10 (AE006260) HYPOTHETICAL PROTEIN; E=0.003 gb:AAC68678.1; (AF079762) N,N-dimethyltransferase [Streptomyces; E=0.052 pir:G75136; menaquinone biosynthesis methlytransferase related; E=0.13; N,N-dimethyltransferase complement(5594855..5595682) Rhodopirellula baltica SH 1 1793564 NP_869382.1 CDS RB10347 NC_005027.1 5595704 5596258 R hypothetical protein complement(5595704..5596258) Rhodopirellula baltica SH 1 1793469 NP_869383.1 CDS RB10350 NC_005027.1 5596387 5596878 R best DB hits: BLAST: pir:H82154; conserved hypothetical protein VC1812 [imported] -; E=6e-04 gb:AAF87148.1; AC002423_13 (AC002423) T23E23.25 [Arabidopsis; E=0.20 COG: VC1812; COG3011 Uncharacterized BCR; E=6e-05; hypothetical protein complement(5596387..5596878) Rhodopirellula baltica SH 1 1790393 NP_869384.1 CDS RB10354 NC_005027.1 5597086 5598849 D hypothetical protein 5597086..5598849 Rhodopirellula baltica SH 1 1795295 NP_869385.1 CDS RB10357 NC_005027.1 5598846 5599451 D hypothetical protein 5598846..5599451 Rhodopirellula baltica SH 1 1790078 NP_869386.1 CDS RB10358 NC_005027.1 5599427 5600203 R hypothetical protein complement(5599427..5600203) Rhodopirellula baltica SH 1 1792049 NP_869387.1 CDS RB10359 NC_005027.1 5600459 5601301 D best DB hits: BLAST: pir:F83592; conserved hypothetical protein PA0419 [imported] -; E=2e-13 gb:AAK03952.1; (AE006224) unknown [Pasteurella multocida]; E=4e-12 pir:A65080; hypothetical protein in endA-gshB intergenic region -; E=1e-10 COG: PA0419; COG1385 Uncharacterized BCR; E=2e-14; hypothetical protein 5600459..5601301 Rhodopirellula baltica SH 1 1793289 NP_869388.1 CDS RB10361 NC_005027.1 5601276 5601440 D hypothetical protein 5601276..5601440 Rhodopirellula baltica SH 1 1796106 NP_869389.1 CDS RB10362 NC_005027.1 5601298 5601540 D hypothetical protein 5601298..5601540 Rhodopirellula baltica SH 1 1792299 NP_869390.1 CDS RB10364 NC_005027.1 5601572 5602762 D best DB hits: BLAST: pir:H69181; hypothetical protein MTH616 - Methanobacterium; E=5e-30 pir:H69125; hypothetical protein MTH210 - Methanobacterium; E=2e-29 gb:AAC48226.1; (AF006826) N-ethylmaleimide-sensitive fusion; E=0.21 COG: MTH616; COG0606 Predicted ATPases; E=5e-31 PFAM: PF00004; ATPase associated with variou; E=1.9e-06 PF01202; Shikimate kinase; E=0.31; ATPase with chaperone activity 5601572..5602762 Rhodopirellula baltica SH 1 1792824 NP_869391.1 CDS RB10367 NC_005027.1 5602851 5606144 D best DB hits: BLAST: pir:C70986; probable serinethreonine protein kinase (EC 2.7.1.-) -; E=1e-17 embl:CAB66178.1; (AL136500) probable serinethreonine protein; E=1e-15 swissprot:Q10697; PKNJ_MYCTU PROBABLE SERINETHREONINE-PROTEIN; E=6e-15 COG: Rv1746; COG0515 Serine/threonine protein kinases; E=1e-18 PFAM: PF00069; Protein kinase domain; E=3.8e-28; serine/threonine protein kinase 5602851..5606144 Rhodopirellula baltica SH 1 1790899 NP_869392.1 CDS RB10370 NC_005027.1 5606187 5606867 R PMID: 8969498 best DB hits: BLAST: swissprot:P54607; YHCW_BACSU HYPOTHETICAL 24.7 KD PROTEIN IN; E=6e-15 ref:XP_010289.2; DNA segment, numerous copies, expressed probes; E=9e-14 gb:AAA58622.1; (M86934) Gene from Xp22.3 which escapes; E=4e-13 COG: BS_yhcW; COG0637 Predicted phosphatase/phosphohexomutase; E=6e-16 gph; COG0546 Predicted phosphatases; E=6e-08 PA2067; COG0637 Predicted phosphatase/phosphohexomutase; E=8e-08 PFAM: PF00702; haloacid dehalogenase-like hydrolas; E=2.1e-26; phosphatase complement(5606187..5606867) Rhodopirellula baltica SH 1 1791399 NP_869393.1 CDS RB10372 NC_005027.1 5606864 5609191 R PMID: 10688204 best DB hits: BLAST: pir:B81282; probable integral membrane protein Cj1373 [imported] -; E=5e-09 COG: Cj1373; COG1033 Membrane proteins related to SecD/SecF; E=5e-10; hypothetical protein complement(5606864..5609191) Rhodopirellula baltica SH 1 1792638 NP_869394.1 CDS lspA NC_005027.1 5609188 5609916 R PMID: 10984043 PMID: 2121716 best DB hits: BLAST: pir:A83077; prolipoprotein signal peptidase PA4559 [imported] -; E=3e-05 swissprot:P17942; LSPA_PSEFL LIPOPROTEIN SIGNAL PEPTIDASE; E=3e-04 embl:CAA11250.1; (AJ223309) SPase II [Myxococcus xanthus]; E=5e-04 COG: PA4559; COG0597 Lipoprotein signal peptidase; E=3e-06 PFAM: PF01252; Signal peptidase (SPase) II; E=0.043; prolipoprotein signal peptidase complement(5609188..5609916) Rhodopirellula baltica SH 1 1793690 NP_869395.1 CDS trxA NC_005027.1 5610063 5610497 R PMID: 2137818 PMID: 3280308 best DB hits: BLAST: swissprot:P08058; THIO_RHOSH THIOREDOXIN (TRX) ----- pir:; E=8e-17 swissprot:P43785; THIO_HAEIN THIOREDOXIN (TRX) ----- pir:; E=2e-14 swissprot:P00275; THI1_CORNE THIOREDOXIN C-1 ----- pir: TXFK; E=1e-13 COG: HI0084; COG0526 Thiol-disulfide isomerase and thioredoxins; E=2e-15 XF2174; COG3118 Thioredoxin domain-containing protein; E=2e-10 PA5240; COG0526 Thiol-disulfide isomerase and thioredoxins; E=2e-10 PFAM: PF00085; Thioredoxin; E=1.1e-24; thioredoxin complement(5610063..5610497) Rhodopirellula baltica SH 1 1794395 NP_869396.1 CDS RB10380 NC_005027.1 5610680 5611582 R hypothetical protein complement(5610680..5611582) Rhodopirellula baltica SH 1 1790208 NP_869397.1 CDS RB10384 NC_005027.1 5611884 5612174 R hypothetical protein complement(5611884..5612174) Rhodopirellula baltica SH 1 1795386 NP_869398.1 CDS RB10385 NC_005027.1 5612201 5612452 R hypothetical protein complement(5612201..5612452) Rhodopirellula baltica SH 1 1793379 NP_869399.1 CDS RB10386 NC_005027.1 5612453 5613286 D best DB hits: PFAM: PF01090; Ribosomal protein S19e; E=0.077; signal peptide 5612453..5613286 Rhodopirellula baltica SH 1 1794869 NP_869400.1 CDS RB10388 NC_005027.1 5613357 5615438 D best DB hits: BLAST: ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=4e-28 pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=1e-27 embl:CAA73979.1; (Y13639) protein kinase [Staphylococcus aureus]; E=5e-27 COG: BH2504_1; COG0515 Serine/threonine protein kinases; E=3e-29 PFAM: PF00069; Protein kinase domain; E=4.6e-52; serine/threonine protein kinase 5613357..5615438 Rhodopirellula baltica SH 1 1795293 NP_869401.1 CDS RB10391 NC_005027.1 5615419 5616087 D hypothetical protein 5615419..5616087 Rhodopirellula baltica SH 1 1793133 NP_869402.1 CDS upK NC_005027.1 5616195 5619110 R best DB hits: BLAST: embl:CAC20842.1; (AJ250467) receptor protein kinase [Pinus; E=6e-04 pir:T10659; probable serinethreonine-specific protein kinase (EC; E=0.019 embl:CAB95344.1; (AL359782) possible adenylate cyclase; E=0.081; receptor protein kinase complement(5616195..5619110) Rhodopirellula baltica SH 1 1794647 NP_869403.1 CDS smuG1 NC_005027.1 5619254 5620012 R PMID: 10074426 best DB hits: BLAST: ddbj:BAA91571.1; (AK001235) unnamed protein product [Homo; E=3e-51 gb:AAD17300.1; (AF125181) single-strand selective monofunctional; E=1e-50 gb:AAF55400.1; (AE003716) CG5285 gene product [Drosophila; E=5e-33; single-strand selective monofunctional uracil DNA glycosylase complement(5619254..5620012) Rhodopirellula baltica SH 1 1794371 NP_869404.1 CDS RB10396 NC_005027.1 5620009 5620857 R membrane associated protein complement(5620009..5620857) Rhodopirellula baltica SH 1 1794636 NP_869405.1 CDS RB10397 NC_005027.1 5620781 5621725 R hypothetical protein complement(5620781..5621725) Rhodopirellula baltica SH 1 1793378 NP_869406.1 CDS ftsA NC_005027.1 5621773 5623224 D best DB hits: BLAST: gb:AAB89578.1; (AE000988) coenzyme F390 synthetase (ftsA-2); E=6e-37 pir:A69082; coenzyme F390 synthetase III - Methanobacterium; E=2e-36 pir:B69115; coenzyme F390 synthetase II - Methanobacterium; E=7e-36 COG: AF1671; COG1541 Coenzyme F390 synthetase; E=6e-38; coenzyme F390 synthetase (ftsA-2) 5621773..5623224 Rhodopirellula baltica SH 1 1794286 NP_869407.1 CDS RB10399 NC_005027.1 5623215 5623460 R hypothetical protein complement(5623215..5623460) Rhodopirellula baltica SH 1 1790932 NP_869408.1 CDS RB10401 NC_005027.1 5623435 5625792 D PMID: 8606192 PMID: 9045821 best DB hits: BLAST: gb:AAB49431.1; (U73374) Cap8B [Staphylococcus aureus]; E=6e-19 gb:AAC46085.1; (U81973) Cap5B [Staphylococcus aureus]; E=1e-18 ddbj:BAB07387.1; (AP001519) capsular polysaccharide biosynthesis; E=2e-18 COG: BH3668; COG0489 ATPases involved in chromosome partitioning; E=2e-19 MJ0547; COG0455 ATPases involved in chromosome partitioning; E=1e-04 PFAM: PF00142; 4Fe-4S iron sulfur cluster bindin; E=0.68; type 8 capsule gene Cap8B 5623435..5625792 Rhodopirellula baltica SH 1 1795542 NP_869409.1 CDS RB10404 NC_005027.1 5625926 5627350 R best DB hits: BLAST: pir:F70345; polysaccharide biosynthesis protein - Aquifex aeolicus; E=0.16; polysaccharide biosynthesis protein complement(5625926..5627350) Rhodopirellula baltica SH 1 1794625 NP_869410.1 CDS RB10406 NC_005027.1 5627316 5628203 R signal peptide complement(5627316..5628203) Rhodopirellula baltica SH 1 1792038 NP_869411.1 CDS RB10409 NC_005027.1 5628235 5628600 D hypothetical protein 5628235..5628600 Rhodopirellula baltica SH 1 1793201 NP_869412.1 CDS RB10410 NC_005027.1 5628807 5630213 D hypothetical protein 5628807..5630213 Rhodopirellula baltica SH 1 1796813 NP_869413.1 CDS RB10412 NC_005027.1 5630210 5630386 D hypothetical protein 5630210..5630386 Rhodopirellula baltica SH 1 1793592 NP_869414.1 CDS RB10413 NC_005027.1 5630383 5634441 R best DB hits: BLAST: gb:AAB89163.1; (AE000959) conserved hypothetical protein; E=6e-09 PFAM: PF00082; Subtilase; E=5e-12; hypothetical protein complement(5630383..5634441) Rhodopirellula baltica SH 1 1792832 NP_869415.1 CDS xynB NC_005027.1 5634693 5639387 D PMID: 9294005 best DB hits: BLAST: embl:CAA72323.1; (Y11564) xylanase [Rhodothermus marinus]; E=2e-06 embl:CAA60868.1; (X87417) xylanase [Rhodothermus marinus]; E=2e-06 pir:B72423; endo-1,4-beta-xylanase B - Thermotoga maritima (strain; E=4e-06 COG: sll0656_1; COG3204 Uncharacterized BCR; E=6e-06 XF0845; COG1472 Beta-glucosidase-related glycosidases; E=0.008 PFAM: PF00404; Dockerin type I repeat; E=0.49 PF02369; Bacterial Ig-like domain (group 1); E=0.16; xylanase 5634693..5639387 Rhodopirellula baltica SH 1 1793051 NP_869416.1 CDS RB10419 NC_005027.1 5639384 5639506 R hypothetical protein complement(5639384..5639506) Rhodopirellula baltica SH 1 1790422 NP_869417.1 CDS RB10420 NC_005027.1 5639547 5640638 D hypothetical protein 5639547..5640638 Rhodopirellula baltica SH 1 1790212 NP_869418.1 CDS RB10423 NC_005027.1 5640680 5646919 D PMID: 9406417 best DB hits: BLAST: pir:T18266; cycloinulo-oligosaccharide fructanotransferase (EC; E=4e-05 gb:AAG47946.1; AF222787_1 (AF222787) cycloinulo-oligosaccharide; E=5e-04 pir:E82410; hypothetical protein VCA0849 [imported] - Vibrio cholerae; E=0.016 PFAM: PF00801; PKD domain; E=0.36 PF00404; Dockerin type I repeat; E=0.17; cycloinulo-oligosaccharide fructanotransferase 5640680..5646919 Rhodopirellula baltica SH 1 1790490 NP_869419.1 CDS RB10427 NC_005027.1 5646882 5647025 R hypothetical protein complement(5646882..5647025) Rhodopirellula baltica SH 1 1791428 NP_869420.1 CDS RB10428 NC_005027.1 5647066 5648352 R best DB hits: BLAST: gb:AAC44056.1; (U51197) unknown [Sphingomonas sp. S88]; E=1e-12 pir:H75097; polysaccharide biosynthesis related protein PAB0783 -; E=4e-05 COG: PAB0783; COG2244 Membrane protein involved in the export of; E=3e-06 PFAM: PF01943; Polysaccharide biosynthesis pro; E=0.02; polysaccharide biosynthesis related protein complement(5647066..5648352) Rhodopirellula baltica SH 1 1791549 NP_869421.1 CDS RB10430 NC_005027.1 5648519 5649511 R PMID: 11481431; hypothetical protein complement(5648519..5649511) Rhodopirellula baltica SH 1 1796809 NP_869422.1 CDS RB10431 NC_005027.1 5649426 5650397 R hypothetical protein complement(5649426..5650397) Rhodopirellula baltica SH 1 1793563 NP_869423.1 CDS RB10433 NC_005027.1 5650421 5651746 R hypothetical protein complement(5650421..5651746) Rhodopirellula baltica SH 1 1796899 NP_869424.1 CDS RB10434 NC_005027.1 5651763 5652902 R best DB hits: BLAST: pir:A75597; mannosyltransferase - Deinococcus radiodurans (strain; E=3e-34 pir:I76776; Mannosyltransferase (EC 5.-.-.-) B - Escherichia coli; E=1e-27 gb:AAF04384.1; AF189151_7 (AF189151) WbdB; mannosyl transferase B; E=1e-27 COG: DRA0039; COG0438 Predicted glycosyltransferases; E=3e-35 PFAM: PF00534; Glycosyl transferases group 1; E=3.4e-29; mannosyltransferase complement(5651763..5652902) Rhodopirellula baltica SH 1 1795204 NP_869425.1 CDS RB10436 NC_005027.1 5652865 5654064 R PMID: 10978535 best DB hits: BLAST: pir:S22620; hypothetical protein 18.9 - Salmonella choleraesuis; E=7e-55 ddbj:BAB03210.1; (AB046360) glycosyltransferase; E=4e-53 ddbj:BAA94399.1; (AB041266) mannosyl transferase [Actinobacillus; E=2e-52 COG: DRA0040; COG0438 Predicted glycosyltransferases; E=1e-50 PFAM: PF00534; Glycosyl transferases group 1; E=2.4e-29; mannosyl transferase complement(5652865..5654064) Rhodopirellula baltica SH 1 1792152 NP_869426.1 CDS amsG NC_005027.1 5654134 5655714 R PMID: 7596293 best DB hits: BLAST: swissprot:Q57491; Y872_HAEIN HYPOTHETICAL SUGAR TRANSFERASE HI0872; E=3e-56 swissprot:Q46628; AMSG_ERWAM UDP-GALACTOSE-LIPID CARRIER; E=5e-56 pir:S61891; undecaprenyl-phosphate galactosephosphotransferase (EC; E=5e-56 COG: HI0872; COG2148 Sugar transferases involved in lipopolysaccharide; E=2e-57 PFAM: PF00895; ATP synthase 8; E=0.37 PF02397; Bacterial sugar transferase; E=3.6e-89; UDP-galactose-lipid carrier transferase complement(5654134..5655714) Rhodopirellula baltica SH 1 1795193 NP_869427.1 CDS RB10440 NC_005027.1 5655693 5655842 D hypothetical protein 5655693..5655842 Rhodopirellula baltica SH 1 1795856 NP_869428.1 CDS RB10441 NC_005027.1 5655913 5656026 D hypothetical protein 5655913..5656026 Rhodopirellula baltica SH 1 1795289 NP_869429.1 CDS RB10442 NC_005027.1 5656076 5657962 R best DB hits: BLAST: swissprot:P42349; YC42_SYNY3 HYPOTHETICAL METHYLTRANSFERASE; E=1e-97 swissprot:Q55914; Y309_SYNY3 HYPOTHETICAL METHYLTRANSFERASE; E=2e-28 swissprot:O58549; Y819_PYRHO HYPOTHETICAL METHYLTRANSFERASE PH0819; E=3e-18 COG: sll1242; COG1032 Fe-S oxidoreductases family 2; E=9e-99; methyltransferase or Fe-S oxidoreductase complement(5656076..5657962) Rhodopirellula baltica SH 1 1790615 NP_869430.1 CDS RB10445 NC_005027.1 5658105 5658269 D hypothetical protein 5658105..5658269 Rhodopirellula baltica SH 1 1791109 NP_869431.1 CDS RB10446 NC_005027.1 5658266 5667091 D best DB hits: BLAST: ddbj:BAA89384.1; (AB025342) ORF10 [Moritella marina]; E=3e-37 pir:T30185; hypothetical protein 7 - Shewanella sp ----- gb:; E=3e-36 pir:T37057; probable multi-domain beta keto-acyl synthase -; E=8e-35 COG: DR1945; COG0331 (acyl-carrier-protein) S-malonyltransferase; E=3e-17 Rv3391_1; COG0451 Nucleoside-diphosphate-sugar epimerases; E=2e-14 BH2492; COG0331 (acyl-carrier-protein) S-malonyltransferase; E=2e-13 PFAM: PF00109; Beta-ketoacyl synthase, N-ter; E=7.7e-09 PF02801; Beta-ketoacyl synthase, C-ter; E=7.6e-61 PF00109; Beta-ketoacyl synthase, N-ter; E=3.6e-21; beta keto-acyl synthase 5658266..5667091 Rhodopirellula baltica SH 1 1792868 NP_869432.1 CDS RB10451 NC_005027.1 5667095 5668255 D best DB hits: BLAST: pir:G70946; probable dioxygenase (EC 1.14.-.-) Rieske iron-sulfur; E=3e-18 pir:T14542; choline monooxygenase - beet ----- gb: AAB80954.1; E=2e-15 pir:G83331; anthranilate dioxygenase large subunit PA2512 [imported]; E=4e-14 COG: Rv3161c; COG2146 Ferredoxin subunits of nitrite reductase and; E=3e-19 PFAM: PF00355; Rieske [2Fe-2S] domain; E=1.8e-21; dioxygenase Rieske iron-sulfur component 5667095..5668255 Rhodopirellula baltica SH 1 1791695 NP_869433.1 CDS chcA NC_005027.1 5668248 5669045 D PMID: 8955309 PMID: 10973220 best DB hits: BLAST: gb:AAC44655.1; (U72144) 1-cyclohexenylcarbonyl CoA reductase; E=4e-40 pir:B69802; glucose 1-dehydrogenase homolog yfhR - Bacillus subtilis; E=4e-37 ddbj:BAB04657.1; (AP001510) glucose 1-dehydrogenase [Bacillus; E=2e-34 COG: BS_yfhR; COG1028 Dehydrogenases with different specificities; E=4e-38 BH0938; COG1028 Dehydrogenases with different specificities (related; E=2e-35 BS_fabG; COG1028 Dehydrogenases with different specificities; E=3e-26 PFAM: PF00106; short chain dehydrogenase; E=8.7e-45 PF00678; Short chain dehydrogenase/reduct; E=0.0016; 1-cyclohexenylcarbonyl CoA reductase 5668248..5669045 Rhodopirellula baltica SH 1 1793193 NP_869434.1 CDS RB10456 NC_005027.1 5669104 5670384 D hypothetical protein 5669104..5670384 Rhodopirellula baltica SH 1 1796843 NP_869435.1 CDS grp NC_005027.1 5670510 5671130 R PMID: 7541909 best DB hits: BLAST: ddbj:BAA08402.1; (D49424) RNA-binding protein [Anabaena; E=4e-16 pir:S58673; RNA-binding protein RbpC - Anabaena variabilis; E=4e-16 pir:S77263; RNA-binding protein ssr1480 - Synechocystis sp. (strain; E=1e-15 COG: ssr1480; COG0724 RNA-binding proteins (RRM domain); E=1e-16 PFAM: PF00076; RNA recognition motif. (a.k.a. RRM,; E=2.9e-31; RNA-binding protein complement(5670510..5671130) Rhodopirellula baltica SH 1 1790095 NP_869436.1 CDS hemY NC_005027.1 5671227 5672684 R PMID: 1459957 PMID: 8288631 best DB hits: BLAST: ddbj:BAB04923.1; (AP001511) protoporphyrinogen IX and; E=2e-46 swissprot:P32397; PPOX_BACSU PROTOPORPHYRINOGEN OXIDASE (PPO); E=9e-41 swissprot:P56601; PPOX_MYXXA PROTOPORPHYRINOGEN OXIDASE (PPO); E=8e-39 COG: BH1204; COG1232 Protoporphyrinogen oxidase; E=1e-47 PFAM: PF01494; FAD binding domain; E=0.64 PF01266; D-amino acid oxidase; E=0.00034 PF00221; Phenylalanine and histidine amm; E=0.39; protoporphyrinogen oxidase complement(5671227..5672684) Rhodopirellula baltica SH 1 1792944 NP_869437.1 CDS RB10460 NC_005027.1 5672698 5674119 R hypothetical protein complement(5672698..5674119) Rhodopirellula baltica SH 1 1790934 NP_869438.1 CDS RB10462 NC_005027.1 5674183 5674386 D hypothetical protein 5674183..5674386 Rhodopirellula baltica SH 1 1791244 NP_869439.1 CDS fpr NC_005027.1 5674394 5675368 D PMID: 8449868 PMID: 7961651 PMID: 9149148 best DB hits: BLAST: swissprot:P28861; FENR_ECOLI FERREDOXIN--NADP REDUCTASE (FNR); E=3e-10 pdb:1FDR; Flavodoxin Reductase From E. Coli; E=3e-10 pir:F82624; ferredoxin-NADP reductase XF1889 [imported] - Xylella; E=5e-10 COG: fpr; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases); E=3e-11 slr1643; COG0369 Sulfite reductase flavoprotein subunit; E=0.005 PFAM: PF00970; Oxidoreductase FAD-binding doma; E=0.015 PF00175; Oxidoreductase FAD/NAD-binding; E=1.2e-06; ferredoxin-NADP reductase 5674394..5675368 Rhodopirellula baltica SH 1 1795191 NP_869440.1 CDS glgC NC_005027.1 5675439 5676728 D catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 5675439..5676728 Rhodopirellula baltica SH 1 1793134 NP_869441.1 CDS fabZ NC_005027.1 5676890 5677426 R PMID: 7806516 best DB hits: BLAST: gb:AAF98278.1; AF197933_8 (AF197933) beta-hydroxyacyl-ACP; E=1e-05 pir:H81661; (3R)-hydroxymyristol-(acyl carrier protein) dehydratase; E=4e-05 pir:B33171; hypothetical 17K protein (lpxA 5' region) - Escherichia; E=5e-05 COG: fabZ; COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier; E=5e-06 PFAM: PF01377; Thioester dehydrase; E=1.3e-15; beta-hydroxyacyl-ACP dehydratase complement(5676890..5677426) Rhodopirellula baltica SH 1 1790559 NP_869442.1 CDS infA NC_005027.1 5677614 5677835 R PMID: 3037488 PMID: 1909328 best DB hits: BLAST: pir:A70121; probable translation initiation factor IF-1 - Lyme; E=1e-20 swissprot:O83135; IF1_TREPA TRANSLATION INITIATION FACTOR IF-1; E=3e-20 swissprot:O51191; IF1_BORBU TRANSLATION INITIATION FACTOR IF-1; E=3e-20 COG: BB0169; COG0361 Translation initiation factor IF-1; E=1e-21 PFAM: PF00575; S1 RNA binding domain; E=1.1e-07; translation initiation factor IF-1 complement(5677614..5677835) Rhodopirellula baltica SH 1 1792594 NP_869443.1 CDS rpsI NC_005027.1 5677848 5678261 R PMID: 3884974 PMID: 1091515 best DB hits: BLAST: swissprot:P02363; RS9_ECOLI 30S RIBOSOMAL PROTEIN S9 -----; E=1e-22 gb:AAK02605.1; (AE006087) RpS9 [Pasteurella multocida]; E=5e-22 pir:C82308; ribosomal protein S9 VC0571 [imported] - Vibrio cholerae; E=2e-21 COG: rpsI; COG0103 Ribosomal protein S9; E=1e-23 PFAM: PF00380; Ribosomal protein S9/S16; E=7.2e-51; 30S ribosomal protein S9 complement(5677848..5678261) Rhodopirellula baltica SH 1 1791252 NP_869444.1 CDS rplM NC_005027.1 5678304 5678759 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(5678304..5678759) Rhodopirellula baltica SH 1 1793989 NP_869445.1 CDS RB10472 NC_005027.1 5678887 5679453 R hypothetical protein complement(5678887..5679453) Rhodopirellula baltica SH 1 1790760 NP_869446.1 CDS RB10473 NC_005027.1 5679433 5681868 D best DB hits: BLAST: pir:D71687; alkaline proteinase secretion protein apre (aprE) RP314; E=0.032 pir:E82263; conserved hypothetical protein VC0913 [imported] -; E=0.053 gb:AAK03081.1; (AE006139) unknown [Pasteurella multocida]; E=0.13 COG: RP314; COG0845 Membrane-fusion protein; E=0.003 PFAM: PF01590; GAF domain; E=0.00029 PF00364; Biotin-requiring enzyme; E=0.0022; alkaline protease secretion protein AprE 5679433..5681868 Rhodopirellula baltica SH 1 1790004 NP_869447.1 CDS RB10478 NC_005027.1 5681878 5682843 D best DB hits: BLAST: pir:E82436; AcrAAcrE family protein VCA0639 [imported] - Vibrio; E=7e-04 pir:C70415; cation efflux system (czcB-like) - Aquifex aeolicus; E=0.040 pir:D83099; probable RND efflux membrane fusion protein precursor; E=0.50 COG: VCA0639; COG0845 Membrane-fusion protein; E=6e-05 PFAM: PF00364; Biotin-requiring enzyme; E=0.0048 PF00529; HlyD family secretion protein; E=0.0018; AcrA/AcrE family protein 5681878..5682843 Rhodopirellula baltica SH 1 1795682 NP_869448.1 CDS RB10479 NC_005027.1 5682921 5685158 D best DB hits: BLAST: pir:F70091; hypothetical protein yydH - Bacillus subtilis -----; E=2e-06 pir:H70326; hypothetical protein aq_294 - Aquifex aeolicus -----; E=0.29 PFAM: PF02163; Sterol-regulatory element bindi; E=0.039; hypothetical protein 5682921..5685158 Rhodopirellula baltica SH 1 1793435 NP_869449.1 CDS RB10481 NC_005027.1 5685184 5685432 D hypothetical protein 5685184..5685432 Rhodopirellula baltica SH 1 1790767 NP_869450.1 CDS RB10483 NC_005027.1 5685437 5685838 D hypothetical protein 5685437..5685838 Rhodopirellula baltica SH 1 1793774 NP_869451.1 CDS recQ NC_005027.1 5685979 5688987 D PMID: 3027506 PMID: 3027506 best DB hits: BLAST: gb:AAA24517.1; (M30198) recQ [Escherichia coli]; E=2e-78 gb:AAA67618.1; (M87049) DNA-dependent ATPase, DNA helicase; E=2e-78 pir:BVECRQ; DNA helicase recQ - Escherichia coli (strain K-12); E=2e-78 COG: recQ; COG0514 Superfamily II DNA helicase; E=2e-79 PFAM: PF00270; DEAD/DEAH box helicase; E=2.7e-39 PF00271; Helicase conserved C-terminal doma; E=2.1e-28; hypothetical protein 5685979..5688987 Rhodopirellula baltica SH 1 1794693 NP_869452.1 CDS RB10488 NC_005027.1 5689099 5691714 R PMID: 20572072 best DB hits: BLAST: pir:S75136; sensory transduction histidine kinase slr2104 -; E=3e-67 pir:E83443; probable sensorresponse regulator hybrid PA1611; E=2e-64 pir:H82211; sensory box sensor histidine kinaseresponse regulator; E=8e-61 COG: VC1349_2; COG0642 Sensory transduction histidine kinases; E=7e-62 PFAM: PF00785; PAC motif; E=0.00076 PF00512; His Kinase A (phosphoacceptor) d; E=1.6e-28 PF02518; Histidine kinase-, DNA gyrase B-; E=1.6e-42; sensory transduction histidine kinase- sensory histidine kinase / response regulator hybrid complement(5689099..5691714) Rhodopirellula baltica SH 1 1792857 NP_869453.1 CDS cheY NC_005027.1 5691635 5692624 R best DB hits: BLAST: pir:G82805; two-component system, regulatory protein XF0450; E=5e-09 swissprot:P43501; PILH_PSEAE PILH PROTEIN ----- pir: S40035; E=3e-08 pir:F82618; chemotaxis-related protein kinase XF1952 [imported] -; E=6e-08 COG: XF0450; COG0784 CheY-like receiver domains; E=5e-10 PA2798; COG2204 AAA superfamily ATPases with N-terminal receiver; E=6e-08 BH1910_1; COG0784 CheY-like receiver domains; E=2e-07 PFAM: PF00072; Response regulator receiver doma; E=5.7e-25; two-component system regulatory protein complement(5691635..5692624) Rhodopirellula baltica SH 1 1790035 NP_869454.1 CDS RB10494 NC_005027.1 5692652 5693962 D best DB hits: BLAST: gb:AAC15080.1; (L37087) HrmA [Nostoc sp.]; E=5e-25 pir:E72377; conserved hypothetical protein - Thermotoga maritima; E=5e-23; hypothetical protein 5692652..5693962 Rhodopirellula baltica SH 1 1791578 NP_869455.1 CDS RB10497 NC_005027.1 5693999 5695177 R hypothetical protein complement(5693999..5695177) Rhodopirellula baltica SH 1 1790756 NP_869456.1 CDS pgk NC_005027.1 5695422 5696615 D PMID: 8021172 best DB hits: BLAST: swissprot:P40924; PGK_BACSU PHOSPHOGLYCERATE KINASE ----- pir:; E=3e-96 swissprot:O52632; PGK_CLOAB PHOSPHOGLYCERATE KINASE ----- gb:; E=4e-96 swissprot:P29409; PGKH_SPIOL PHOSPHOGLYCERATE KINASE, CHLOROPLAST; E=2e-93 COG: BS_pgk; COG0126 3-phosphoglycerate kinase; E=3e-97 PFAM: PF00162; Phosphoglycerate kinase; E=8.3e-186; phosphoglycerate kinase 5695422..5696615 Rhodopirellula baltica SH 1 1793877 NP_869457.1 CDS RB10501 NC_005027.1 5696612 5696818 D hypothetical protein 5696612..5696818 Rhodopirellula baltica SH 1 1792844 NP_869458.1 CDS RB10503 NC_005027.1 5696901 5698274 D best DB hits: BLAST: pir:B72359; lipopolysaccharide biosynthesis protein BplA -; E=7e-09 ddbj:BAB05939.1; (AP001514) dehydrogenase [Bacillus halodurans]; E=2e-07 gb:AAC23913.1; (AF039207) NADH-dependent dehydrogenase homolog; E=2e-06 COG: TM0585; COG0673 Predicted dehydrogenases and related proteins; E=7e-10 PFAM: PF01118; Semialdehyde dehydrogenase, NA; E=0.37 PF01408; Oxidoreductase, NAD-bin; E=6e-09 PF02894; Oxidoreductase, C-termi; E=0.52; lipopolysaccharide biosynthesis protein BplA- NADH-dependent oxidoreductase 5696901..5698274 Rhodopirellula baltica SH 1 1790423 NP_869459.1 CDS RB10507 NC_005027.1 5698496 5700433 D PMID: 8955399 best DB hits: BLAST: gb:AAC44671.1; (U66897) alpha-glucosidase [Bacteroides; E=4e-42 PFAM: PF01729; Quinolinate phosphoribosyl transfera; E=0.71; alpha-glucosidase 5698496..5700433 Rhodopirellula baltica SH 1 1791293 NP_869460.1 CDS cinA NC_005027.1 5700449 5700982 R best DB hits: BLAST: pir:F83378; hypothetical protein PA2141 [imported] - Pseudomonas; E=7e-08 pir:B82935; conserved hypothetical UU083 [imported] - Ureaplasma; E=9e-08 pir:G71875; hypothetical protein jhp0886 - Helicobacter pylori; E=2e-07 COG: PA2141; COG1546 Uncharacterized protein (competence- and; E=7e-09 PFAM: PF02464; Competence-damaged protein; E=8.7e-13; related to competence-damage inducible protein complement(5700449..5700982) Rhodopirellula baltica SH 1 1791200 NP_869461.1 CDS cmk NC_005027.1 5700979 5701668 R PMID: 9126287 best DB hits: BLAST: swissprot:Q49885; KCY_MYCLE CYTIDYLATE KINASE (CK) (CYTIDINE; E=2e-30 swissprot:Q9RC80; KCY_BACHD CYTIDYLATE KINASE (CK) (CYTIDINE; E=5e-30 pir:S75604; pantothenate synthetase panC - Synechocystis sp. (strain; E=3e-29 COG: BH1634; COG0283 Cytidylate kinase; E=5e-31 PFAM: PF02223; Thymidylate kinase; E=0.42 PF00485; Phosphoribulokinase / Uridine; E=0.094 PF01202; Shikimate kinase; E=3.5e-05; cytidylate kinase complement(5700979..5701668) Rhodopirellula baltica SH 1 1792565 NP_869462.1 CDS RB10512 NC_005027.1 5701665 5704376 R best DB hits: BLAST: pir:A75496; conserved hypothetical protein - Deinococcus radiodurans; E=1e-12 pir:F83287; hypothetical protein PA2873 [imported] - Pseudomonas; E=8e-11 pir:F70464; hypothetical protein aq_1912 - Aquifex aeolicus -----; E=1e-10 COG: DR0620_2; COG1305 transglutaminases, cysteine; E=2e-13 PFAM: PF01841; Transglutaminase-like superfam; E=3e-17; transmembrane protein complement(5701665..5704376) Rhodopirellula baltica SH 1 1794247 NP_869463.1 CDS RB10515 NC_005027.1 5704327 5705595 R best DB hits: BLAST: pir:H71125; hypothetical protein PH0774 - Pyrococcus horikoshii; E=6e-06 pir:T34965; probable membrane protein - Streptomyces coelicolor; E=7e-05 pir:A75012; conserved hypothetical protein PAB1277 - Pyrococcus; E=1e-04 COG: PH0774; COG1721 Uncharacterized ACR; E=5e-07 PFAM: PF01882; Protein of unknown function DUF58; E=5.4e-20; hypothetical protein complement(5704327..5705595) Rhodopirellula baltica SH 1 1796800 NP_869464.1 CDS yeaC NC_005027.1 5705602 5706546 R best DB hits: BLAST: pir:C69791; methanol dehydrogenase regulation homolog yeaC -; E=4e-73 ddbj:BAB04323.1; (AP001509) methanol dehydrogenase regulatory; E=6e-73 pir:S75782; methanol dehydrogenase regulatory protein -; E=3e-70 COG: BS_yeaC; COG0714 MoxR-like ATPases; E=4e-74 PFAM: PF00004; ATPase associated with; E=5.2e-06 PF01078; Magnesium chelatase, subunit; E=3.4e-13; methanol dehydrogenase regulation homolog yeaC complement(5705602..5706546) Rhodopirellula baltica SH 1 1794429 NP_869465.1 CDS RB10518 NC_005027.1 5706651 5706881 R hypothetical protein complement(5706651..5706881) Rhodopirellula baltica SH 1 1790483 NP_869466.1 CDS dprA NC_005027.1 5706831 5708198 D best DB hits: BLAST: pir:F81236; DNA processing chain A NMB0116 [imported] - Neisseria; E=5e-47 pir:C82009; DprA homolog NMA0158 [imported] - Neisseria meningitidis; E=4e-46 pir:G82369; smf protein VC0048 [imported] - Vibrio cholerae (group; E=8e-44 COG: NMB0116; COG0758 Predicted Rossmann-fold nucleotide-binding protein; E=5e-48 PFAM: PF00633; Helix-hairpin-helix motif.; E=0.15 PF02481; SMF family; E=2.4e-83; DNA processing chain A 5706831..5708198 Rhodopirellula baltica SH 1 1793985 NP_869467.1 CDS RB10521 NC_005027.1 5708182 5708343 D hypothetical protein 5708182..5708343 Rhodopirellula baltica SH 1 1793708 NP_869468.1 CDS RB10524 NC_005027.1 5708488 5712261 D best DB hits: BLAST: pir:D82995; conserved hypothetical protein PA5201 [imported] -; E=9e-17 pir:T35268; probable transcription accessory protein - Streptomyces; E=3e-16 gb:AAK03532.1; (AE006181) unknown [Pasteurella multocida]; E=3e-15 COG: PA5201; COG2183 Predicted RNA binding protein, contains S1 domain; E=8e-18 PFAM: PF00575; S1 RNA binding domain; E=7.3e-15; RNA-binding protein 5708488..5712261 Rhodopirellula baltica SH 1 1793701 NP_869469.1 CDS RB10530 NC_005027.1 5712258 5712755 D hypothetical protein 5712258..5712755 Rhodopirellula baltica SH 1 1793583 NP_869470.1 CDS RB10531 NC_005027.1 5712827 5712958 D hypothetical protein 5712827..5712958 Rhodopirellula baltica SH 1 1794801 NP_869471.1 CDS sun NC_005027.1 5712955 5714478 R best DB hits: BLAST: pir:A82193; Sunnucleolar protein family protein VC1502 [imported] -; E=3e-23 gb:AAG56825.1; AE005406_4 (AE005406) nucleolar proteins; E=2e-21 pir:C64945; probable rRNA methylase yebU - Escherichia coli -----; E=5e-21 COG: yebU_1; COG0144 tRNA and rRNA cytosine-C5-methylases; E=5e-22 PFAM: PF01189; NOL1/NOP2/sun family; E=1.1e-24; Sun/nucleolar protein family protein- tRNA and rRNA cytosine-C5-methylase complement(5712955..5714478) Rhodopirellula baltica SH 1 1790893 NP_869472.1 CDS RB10535 NC_005027.1 5714475 5714810 R hypothetical protein complement(5714475..5714810) Rhodopirellula baltica SH 1 1791898 NP_869473.1 CDS spoVG NC_005027.1 5714785 5715492 R PMID: http://us.expasy.org/cgi-bin/niceprot.pl?P28016 best DB hits: BLAST: ddbj:BAB03783.1; (AP001507) stage V sporulation protein G; E=3e-11 swissprot:P28016; SP5G_BACME STAGE V SPORULATION PROTEIN G -----; E=8e-10 swissprot:P28015; SP5G_BACSU STAGE V SPORULATION PROTEIN G -----; E=1e-09 COG: BH0064; COG2088 Uncharacterized protein, involved in the regulation; E=3e-12 BS_spoVG; COG2088 Uncharacterized protein, involved in the; E=1e-10 AF1778; COG2088 Uncharacterized protein, involved in the regulation; E=3e-05; stage V sporulation protein G- protein involved in regulation of septum location complement(5714785..5715492) Rhodopirellula baltica SH 1 1790058 NP_869474.1 CDS ispE NC_005027.1 5715502 5716491 R best DB hits: BLAST: swissprot:Q9KGK0; ISPE_BACHD; E=2e-13 swissprot:Q9RR89; ISPE_DEIRA; E=1e-12 swissprot:O05596; ISPE_MYCTU; E=2e-10 COG: BH0061; COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol; E=2e-14 ychB; COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate; E=2e-05 TM1383; COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol; E=2e-04; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase complement(5715502..5716491) Rhodopirellula baltica SH 1 1794233 NP_869475.1 CDS RB10538 NC_005027.1 5716496 5717476 R best DB hits: BLAST: pir:E70410; hypothetical protein aq_1276 - Aquifex aeolicus -----; E=2e-15 gb:AAA96792.1; (U51683) ORF9; hypothetical protein [Brucella; E=4e-14 pir:G71632; hypothetical protein RP730 - Rickettsia prowazekii; E=8e-12; hypothetical protein complement(5716496..5717476) Rhodopirellula baltica SH 1 1790528 NP_869476.1 CDS lpdX NC_005027.1 5717509 5718741 R PMID: 1987124 PMID: 1602961 PMID: 1429432 PMID: 8444173 PMID: 8366125 best DB hits: BLAST: pir:F72094; UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine; E=4e-46 swissprot:O24991; LPXD_HELPY UDP-3-O-[3-HYDROXYMYRISTOYL]; E=1e-43 gb:AAC45422.1; (U79481); E=7e-43 COG: CPn0302; COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine; E=4e-47 lpxA; COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine; E=1e-13 NMB0178; COG1043 Acyl-[acyl carrier; E=2e-12 PFAM: PF00132; Bacterial transferase hexapeptide (f; E=0.0016; UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase complement(5717509..5718741) Rhodopirellula baltica SH 1 1795827 NP_869477.1 CDS RB10541 NC_005027.1 5718795 5719784 D best DB hits: BLAST: gb:AAF26789.1; AC016829_13 (AC016829) O-linked GlcNAc; E=1e-05 swissprot:P56558; OGT1_RAT UDP-N-ACETYLGLUCOSAMINE--PEPTIDE; E=3e-05 gb:AAF31458.1; (AF223393) HRNT1 [Homo sapiens]; E=3e-05 COG: TP0468; COG0457 TPR-repeat-containing proteins; E=7e-04 PFAM: PF00515; TPR Domain; E=0.00012; TPR repeat-containing O-linked GlcNAc transferase 5718795..5719784 Rhodopirellula baltica SH 1 1790376 NP_869478.1 CDS glyS NC_005027.1 5719900 5721576 D Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase 5719900..5721576 Rhodopirellula baltica SH 1 1790482 NP_869479.1 CDS RB10548 NC_005027.1 5721577 5721732 D hypothetical protein 5721577..5721732 Rhodopirellula baltica SH 1 1790742 NP_869480.1 CDS RB10549 NC_005027.1 5721750 5722643 R best DB hits: BLAST: pir:G83242; hypothetical protein PA3219 [imported] - Pseudomonas; E=6e-35 COG: PA3219; COG2908 Uncharacterized BCR; E=5e-36; hypothetical protein complement(5721750..5722643) Rhodopirellula baltica SH 1 1789962 NP_869481.1 CDS RB10551 NC_005027.1 5722722 5722991 D hypothetical protein 5722722..5722991 Rhodopirellula baltica SH 1 1795256 NP_869482.1 CDS RB10552 NC_005027.1 5722904 5723086 D hypothetical protein 5722904..5723086 Rhodopirellula baltica SH 1 1791245 NP_869483.1 CDS sdhC NC_005027.1 5723185 5724069 D PMID: 3086287 PMID: 3027051 PMID: 3036777 best DB hits: BLAST: swissprot:P08064; DHSC_BACSU SUCCINATE DEHYDROGENASE CYTOCHROME; E=2e-23 embl:CAA69871.1; (Y08563) succinate dehydrogenase subunit C; E=6e-20 ddbj:BAB06812.1; (AP001517) succinate dehydrogenase cytochrome; E=1e-19 COG: BS_sdhC; COG2009 Succinate dehydrogenase/fumarate reductase; E=2e-24; succinate dehydrogenase cytochrome B-558 subunit 5723185..5724069 Rhodopirellula baltica SH 1 1791719 NP_869484.1 CDS sdhA NC_005027.1 5724111 5726120 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 5724111..5726120 Rhodopirellula baltica SH 1 1794180 NP_869485.1 CDS sdhB NC_005027.1 5726209 5727063 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 5726209..5727063 Rhodopirellula baltica SH 1 1790667 NP_869486.1 CDS RB10556 NC_005027.1 5727064 5727468 D signal peptide 5727064..5727468 Rhodopirellula baltica SH 1 1793244 NP_869487.1 CDS RB10558 NC_005027.1 5727501 5729066 R best DB hits: BLAST: ddbj:BAA95412.1; (AB036744) This protein has 3 calmodulin-like; E=0.002 ddbj:BAB03079.1; (AP001313) calmodulin-like protein [Arabidopsis; E=0.016 pir:A31797; Spec-related protein (clone LpS1) - sea urchin; E=0.032 PFAM: PF00036; EF hand; E=0.096; calmodulin-like membrane associated Ca(2+)-binding protein complement(5727501..5729066) Rhodopirellula baltica SH 1 1790723 NP_869488.1 CDS RB10560 NC_005027.1 5729063 5731867 R best DB hits: PFAM: PF00263; Bacterial type II and III secretio; E=0.066; GSP protein complement(5729063..5731867) Rhodopirellula baltica SH 1 1795366 NP_869489.1 CDS RB10563 NC_005027.1 5732009 5732605 D hypothetical protein 5732009..5732605 Rhodopirellula baltica SH 1 1793192 NP_869490.1 CDS gntP NC_005027.1 5732695 5734146 R PMID: 3020045 best DB hits: BLAST: ddbj:BAA83912.1; (AB024550) GNTP [Bacillus halodurans] -----; E=3e-28 gb:AAK03824.1; (AE006211) GntP [Pasteurella multocida]; E=4e-28 swissprot:Q9Z670; GNTP_ZYMMO GLUCONATE PERMEASE ----- gb:; E=6e-26 COG: BH0805; COG2610 H+/gluconate symporter and related permeases; E=3e-29 PFAM: PF02447; GntP family permease; E=1.7e-49; gluconate permease gntP complement(5732695..5734146) Rhodopirellula baltica SH 1 1792444 NP_869491.1 CDS ate1 NC_005027.1 5734191 5734994 R Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase complement(5734191..5734994) Rhodopirellula baltica SH 1 1790032 NP_869492.1 CDS RB10569 NC_005027.1 5735008 5736174 R hypothetical protein complement(5735008..5736174) Rhodopirellula baltica SH 1 1793935 NP_869493.1 CDS RB10570 NC_005027.1 5736125 5736859 R hypothetical protein complement(5736125..5736859) Rhodopirellula baltica SH 1 1791771 NP_869494.1 CDS RB10573 NC_005027.1 5736845 5737138 D hypothetical protein 5736845..5737138 Rhodopirellula baltica SH 1 1793873 NP_869495.1 CDS RB10574 NC_005027.1 5737148 5738278 R hypothetical protein complement(5737148..5738278) Rhodopirellula baltica SH 1 1794737 NP_869496.1 CDS RB10576 NC_005027.1 5738298 5738786 D hypothetical protein 5738298..5738786 Rhodopirellula baltica SH 1 1790497 NP_869497.1 CDS RB10579 NC_005027.1 5738949 5739254 R signal peptide complement(5738949..5739254) Rhodopirellula baltica SH 1 1790116 NP_869498.1 CDS RB10580 NC_005027.1 5739063 5739272 D signal peptide 5739063..5739272 Rhodopirellula baltica SH 1 1796771 NP_869499.1 CDS RB10581 NC_005027.1 5739353 5740507 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein 5739353..5740507 Rhodopirellula baltica SH 1 1795317 NP_869500.1 CDS RB10583 NC_005027.1 5740602 5743778 D best DB hits: BLAST: pir:B70374; conserved hypothetical protein aq_854 - Aquifex aeolicus; E=1e-05 ddbj:BAA91540.1; (AK001182) unnamed protein product [Homo; E=0.12 embl:CAB98267.1; (AJ276171) ASPIC [Homo sapiens]; E=0.12 COG: aq_854; COG0457 TPR-repeat-containing proteins; E=1e-06 PFAM: PF00515; TPR Domain; E=0.059; TPR repeat-containing protein 5740602..5743778 Rhodopirellula baltica SH 1 1791327 NP_869501.1 CDS pepQ NC_005027.1 5743888 5745102 D best DB hits: BLAST: gb:AAG19595.1; (AE005049) X-pro aminopeptidase homolog; PepQ2; E=1e-43 gb:AAB89220.1; (AE000962) X-pro aminopeptidase (pepQ); E=3e-16 swissprot:Q10698; YK89_MYCTU PROBABLE DIPEPTIDASE RV2089C -----; E=4e-16 COG: VNG1233G; COG0006 Xaa-Pro aminopeptidase; E=1e-44 PFAM: PF00557; metallopeptidase M24; E=0.3; X-pro aminopeptidase PepQ2 5743888..5745102 Rhodopirellula baltica SH 1 1792756 NP_869502.1 CDS RB10587 NC_005027.1 5745087 5745764 D best DB hits: BLAST: pir:F75129; hypothetical protein PAB0562 - Pyrococcus abyssi (strain; E=4e-07 embl:CAC23276.1; (AL512965) hypothetical [Sulfolobus; E=1e-05 pir:A69108; probable phosphoesterase (EC 3.1.-.-) MTH1803 -; E=2e-04 COG: PAB0562; COG1407 Predicted ICC-like phosphoesterases; E=3e-08; phosphoesterase 5745087..5745764 Rhodopirellula baltica SH 1 1790215 NP_869503.1 CDS RB10589 NC_005027.1 5745783 5745971 D hypothetical protein 5745783..5745971 Rhodopirellula baltica SH 1 1794650 NP_869504.1 CDS RB10590 NC_005027.1 5745968 5747566 D PMID: 10368134 best DB hits: BLAST: swissprot:P75920; MDOC_ECOLI GLUCANS BIOSYNTHESIS PROTEIN MDOC; E=2e-10 gb:AAG55793.1; AE005315_7 (AE005315) orf, hypothetical protein; E=2e-09 embl:CAB77037.1; (AJ245997) hypothetical protein [Xanthomonas; E=0.003 PFAM: PF00023; Ank repeat; E=1e-05; glucans biosynthesis protein mdoC- transmembrane protein 5745968..5747566 Rhodopirellula baltica SH 1 1793360 NP_869505.1 CDS pfk NC_005027.1 5747563 5748924 R catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate; pyrophosphate--fructose-6-phosphate 1-phosphotransferase complement(5747563..5748924) Rhodopirellula baltica SH 1 1795007 NP_869506.1 CDS pyc NC_005027.1 5749128 5752628 R biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase complement(5749128..5752628) Rhodopirellula baltica SH 1 1794607 NP_869507.1 CDS RB10593 NC_005027.1 5752771 5753001 R hypothetical protein complement(5752771..5753001) Rhodopirellula baltica SH 1 1792690 NP_869508.1 CDS RB10595 NC_005027.1 5752935 5755793 R best DB hits: BLAST: pir:T49425; hypothetical protein B17C10.60 [imported] - Neurospora; E=0.0 embl:CAA87818.1; (Z47815) unknown [Saccharomyces cerevisiae]; E=0.0 embl:CAA96728.1; (Z72549) ORF YGL027c [Saccharomyces cerevisiae]; E=7e-06 PFAM: PF00452; Apoptosis regulator proteins, B; E=0.0068; hypothetical protein complement(5752935..5755793) Rhodopirellula baltica SH 1 1794467 NP_869509.1 CDS RB10596 NC_005027.1 5755604 5756743 R hypothetical protein complement(5755604..5756743) Rhodopirellula baltica SH 1 1795023 NP_869510.1 CDS arsB NC_005027.1 5756796 5758457 R PMID: 20233298 best DB hits: BLAST: gb:AAF30402.1; AF109924_1 (AF109924) sulfatase 1 precursor [Helix; E=8e-37 gb:AAF49287.1; (AE003522) CG7402 gene product [Drosophila; E=2e-29 gb:AAA51779.1; (M32373) arylsulfatase B precursor [Homo sapiens]; E=3e-29 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=6e-26 PFAM: PF00884; Sulfatase; E=2e-35; sulfatase 1 precursor complement(5756796..5758457) Rhodopirellula baltica SH 1 1794777 NP_869511.1 CDS RB10601 NC_005027.1 5758512 5758793 R hypothetical protein complement(5758512..5758793) Rhodopirellula baltica SH 1 1796974 NP_869512.1 CDS RB10603 NC_005027.1 5758745 5759563 D best DB hits: BLAST: embl:CAB94996.1; (AJ278464) annexin A11 [Homo sapiens]; E=0.20 ref:XP_005688.1; annexin XI [Homo sapiens]; E=0.56; signal peptide 5758745..5759563 Rhodopirellula baltica SH 1 1796915 NP_869513.1 CDS RB10607 NC_005027.1 5759537 5759926 R hypothetical protein complement(5759537..5759926) Rhodopirellula baltica SH 1 1793239 NP_869514.1 CDS RB10608 NC_005027.1 5759903 5761276 D PMID: 11292750 best DB hits: BLAST: swissprot:P03835; YI41_ECOLI INSERTION ELEMENT IS4 HYPOTHETICAL; E=0.030 embl:CAA57483.1; (X81894) ORF [Enterobacter agglomerans]; E=0.064 COG: yi41; COG3385 Predicted transposase; E=0.003; transposase insG for insertion sequence element IS4 5759903..5761276 Rhodopirellula baltica SH 1 1793346 NP_869515.1 CDS RB10612 NC_005027.1 5761454 5762932 D PMID: 8244397 PMID: 8325651 best DB hits: BLAST: gb:AAA16877.1; (L13329) iduronate-2-sulfatase [Homo sapiens]; E=1e-39 gb:AAB33747.1; iduronate-2-sulfatase, IDS {EC 3.1.6.13} [human,; E=6e-39 gb:AAA37880.1; (L07921) iduronate sulfatase [Mus musculus]; E=6e-37 COG: PA0031; COG3119 Arylsulfatase A and related enzymes; E=2e-28 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=1e-08 VNG0061C; COG3119 Arylsulfatase A and related enzymes; E=2e-08 PFAM: PF00884; Sulfatase; E=5.7e-22; iduronate-2-sulfatase 5761454..5762932 Rhodopirellula baltica SH 1 1792439 NP_869516.1 CDS RB10614 NC_005027.1 5763239 5764348 R PMID: 11157937 PMID: 11481430 best DB hits: BLAST: swissprot:Q9R9N0; LPSD_RHIME LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS; E=4e-17 swissprot:Q9R9N1; LPSE_RHIME LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS; E=2e-16 ddbj:BAB07431.1; (AP001519) BH3712~unknown conserved protein; E=3e-14 COG: DR0713; COG0438 Predicted glycosyltransferases; E=3e-17 PFAM: PF00534; Glycosyl transferases group 1; E=1e-30; lipopolysaccharide core biosynthesis glycosyl transferase lpsD complement(5763239..5764348) Rhodopirellula baltica SH 1 1791901 NP_869517.1 CDS RB10616 NC_005027.1 5764381 5766285 R PMID: 9278503 PMID: 3038546 best DB hits: BLAST: ddbj:BAB04209.1; (AP001508) altronate hydrolase [Bacillus; E=6e-65 gb:AAG58224.1; AE005539_1 (AE005539) altronate hydrolase; E=2e-64 swissprot:P42604; UXAA_ECOLI ALTRONATE HYDROLASE (ALTRONIC ACID; E=2e-63 COG: BH0490; COG2721 Altronate dehydratase; E=6e-66; altronate hydrolase complement(5764381..5766285) Rhodopirellula baltica SH 1 1790875 NP_869518.1 CDS sucC NC_005027.1 5766160 5767401 D PMID: 3002435 PMID: 8144675 best DB hits: BLAST: ddbj:BAB06189.1; (AP001515) succinyl-CoA synthetase (beta; E=1e-101 swissprot:P80886; SUCC_BACSU SUCCINYL-COA SYNTHETASE BETA CHAIN; E=5e-99 pir:H82120; succinyl-CoA synthase, beta chain VC2085 [imported] -; E=8e-91 COG: BH2470; COG0045 Succinyl-CoA synthetase beta subunit; E=1e-102 PFAM: PF02222; ATP-grasp domain; E=1.7e-37 PF00549; CoA-ligase; E=1.3e-66; succinyl-CoA synthetase subunit beta 5766160..5767401 Rhodopirellula baltica SH 1 1795467 NP_869519.1 CDS sucD NC_005027.1 5767521 5768393 D PMID: 3002435 PMID: 2548486 PMID: 8144675 best DB hits: BLAST: embl:CAA54877.1; (X77919) succinyl-CoA synthetase alpha; E=3e-91 swissprot:P53591; SUCD_COXBU SUCCINYL-COA SYNTHETASE ALPHA CHAIN; E=5e-91 swissprot:P07459; SUCD_ECOLI SUCCINYL-COA SYNTHETASE ALPHA CHAIN; E=5e-90 COG: sucD; COG0074 succinyl-CoA synthetase subunit alpha; E=5e-91 PFAM: PF00549; CoA-ligase; E=4.1e-64; succinyl-CoA synthetase subunit alpha 5767521..5768393 Rhodopirellula baltica SH 1 1791861 NP_869520.1 CDS RB10620 NC_005027.1 5768412 5768561 R hypothetical protein complement(5768412..5768561) Rhodopirellula baltica SH 1 1794398 NP_869521.1 CDS RB10621 NC_005027.1 5768572 5768916 R hypothetical protein complement(5768572..5768916) Rhodopirellula baltica SH 1 1793140 NP_869522.1 CDS RB10623 NC_005027.1 5768958 5769140 R hypothetical protein complement(5768958..5769140) Rhodopirellula baltica SH 1 1795351 NP_869523.1 CDS groES NC_005027.1 5769148 5769429 D PMID: 98386497 best DB hits: BLAST: gb:AAC36499.1; (U45241) GroESHSP10 homolog [Lawsonia; E=1e-21 ddbj:BAA19726.1; (D88802) groES [Bacillus subtilis] -----; E=2e-21 swissprot:P26210; CH10_BACP3 10 KD CHAPERONIN (PROTEIN CPN10); E=4e-21 COG: BS_groES; COG0234 Co-chaperonin GroES (HSP10); E=2e-22 PFAM: PF00166; Chaperonin 10 Kd subunit; E=6.3e-47; molecular chaperone GroES 5769148..5769429 Rhodopirellula baltica SH 1 1790905 NP_869524.1 CDS groEL NC_005027.1 5769500 5771119 D PMID: 8808920 best DB hits: BLAST: gb:AAD37976.1; AF145252_2 (AF145252) heat shock protein GroEL; E=1e-165 swissprot:P77829; CH61_BRAJA 60 KD CHAPERONIN 1 (PROTEIN CPN60 1); E=1e-165 gb:AAC36500.1; (U45241) GroELHSP60 homolog [Lawsonia; E=1e-162 COG: CPn0134; COG0459 Chaperonin GroEL (HSP60 family); E=1e-162 PFAM: PF00118; TCP-1/cpn60 chaperonin family; E=3.5e-219; molecular chaperone GroEL 5769500..5771119 Rhodopirellula baltica SH 1 1794215 NP_869525.1 CDS RB10630 NC_005027.1 5771116 5771277 D hypothetical protein 5771116..5771277 Rhodopirellula baltica SH 1 1793839 NP_869526.1 CDS RB10631 NC_005027.1 5771311 5772474 D PMID: 11258796 old EC_number=1.14.1.- best DB hits: BLAST: pir:G70946; probable dioxygenase (EC 1.14.-.-) Rieske iron-sulfur; E=4e-17 ddbj:BAA15597.1; (D90823) Benzene 1,2-dioxygenase a subunit (EC; E=2e-15 swissprot:P76253; YEAW_ECOLI DIOXYGENASE ALPHA SUBUNIT; E=2e-15 COG: Rv3161c; COG2146 Ferredoxin subunits of nitrite reductase and; E=3e-18 PFAM: PF00355; Rieske [2Fe-2S] domain; E=4.6e-17; dioxygenase alpha subunit yeaW 5771311..5772474 Rhodopirellula baltica SH 1 1790867 NP_869527.1 CDS RB10634 NC_005027.1 5772471 5773010 D hypothetical protein 5772471..5773010 Rhodopirellula baltica SH 1 1792935 NP_869528.1 CDS RB10637 NC_005027.1 5772967 5773164 D hypothetical protein 5772967..5773164 Rhodopirellula baltica SH 1 1794185 NP_869529.2 CDS rpsB NC_005027.1 5773547 5774329 D one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 5773547..5774329 Rhodopirellula baltica SH 1 1791027 NP_869530.1 CDS tsf NC_005027.1 5774380 5775360 D EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 5774380..5775360 Rhodopirellula baltica SH 1 1792379 NP_869531.1 CDS RB10641 NC_005027.1 5775513 5776442 R best DB hits: BLAST: ddbj:BAB10039.1; (AB007727) Rab geranylgeranyltransferase, beta; E=5e-05 swissprot:P41992; PFTB_CAEEL PROBABLE PROTEIN FARNESYLTRANSFERASE; E=7e-05 swissprot:Q04903; PFTB_PEA PROTEIN FARNESYLTRANSFERASE BETA; E=0.005 PFAM: PF00432; Prenyltransferase and squalene ox; E=1.4e-08; beta-subunit of geranylgeranyltransferase or farnesyltransferase complement(5775513..5776442) Rhodopirellula baltica SH 1 1794991 NP_869532.1 CDS flgK NC_005027.1 5776444 5778198 R PMID: 8158647 best DB hits: BLAST: pir:A81293; probable flagellar hook-associated protein Cj1466; E=8e-31 pir:G71853; flagellar hook-associated protein 1 (hap1) -; E=9e-29 gb:AAG61142.1; (AF333079) flagellar hook-associated protein 1; E=2e-28 COG: Cj1466; COG1256 Flagellar hook-associated protein; E=8e-32 PFAM: PF00460; Flagella basal body rod protein; E=7.7e-08; flagellar hook-associated protein complement(5776444..5778198) Rhodopirellula baltica SH 1 1791272 NP_869533.1 CDS RB10648 NC_005027.1 5778228 5779160 R hypothetical protein complement(5778228..5779160) Rhodopirellula baltica SH 1 1792609 NP_869534.1 CDS trpB NC_005027.1 5779234 5780457 D catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 5779234..5780457 Rhodopirellula baltica SH 1 1794752 NP_869535.1 CDS RB10652 NC_005027.1 5780554 5781579 D PMID: 10660060 best DB hits: BLAST: gb:AAD55584.1; (AF077869) C-methyltransferase [Streptomyces; E=4e-09 gb:AAG15232.1; AF288602_4 (AF288602) CrtF [Chloroflexus; E=4e-07 pir:T34921; probable methyltransferase - Streptomyces coelicolor; E=2e-06 COG: Rv0089; COG0500 SAM-dependent methyltransferases; E=7e-04 DR2405; COG2226 Methylase involved in ubiquinone/menaquinone; E=0.002; C-methyltransferase 5780554..5781579 Rhodopirellula baltica SH 1 1793005 NP_869536.1 CDS nifS NC_005027.1 5781576 5782817 D best DB hits: BLAST: gb:AAK05889.1; AE006408_13 (AE006408) conserved hypothetical; E=2e-16 pir:A72506; probable tRNA splicing protein SPL1 APE2023 - Aeropyrum; E=3e-17 pir:F65063; hypothetical protein b2810 - Escherichia coli (strain; E=8e-18 COG: BB0084; COG0520 Selenocysteine lyase; E=2e-13 yfhO; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; E=1e-14 BS_ycbU; COG0520 Selenocysteine lyase; E=2e-15 PFAM: PF00266; Aminotransferase class-V; E=1.5e-05; nifS protein 5781576..5782817 Rhodopirellula baltica SH 1 1796808 NP_869537.1 CDS coaD NC_005027.1 5782824 5783363 D PMID: 10480925 PMID: 10205156 best DB hits: BLAST: swissprot:Q9WZK0; COAD_THEMA PHOSPHOPANTETHEINE; E=1e-27 ddbj:BAB06308.1; (AP001516) pantetheine-phosphate; E=1e-27 swissprot:Q55235; COAD_SYNP7 PHOSPHOPANTETHEINE; E=1e-27 COG: TM0741; COG0669 Phosphopantetheine adenylyltransferase; E=1e-28 VNG0301C; COG1056 Nicotinamide mononucleotide adenylyltransferase; E=0.003 aq_1368; COG0615 Predicted cytidylyltransferases; E=0.005 PFAM: PF01467; Cytidylyltransferase; E=3.7e-32; phosphopantetheine adenylyltransferase 5782824..5783363 Rhodopirellula baltica SH 1 1793588 NP_869538.1 CDS RB10655 NC_005027.1 5783360 5784292 D best DB hits: BLAST: pir:G83352; transcriptional regulator MtlR PA2337 [imported] -; E=1e-09 pir:S52856; AraC-like protein - Azorhizobium caulinodans -----; E=1e-08 gb:AAF43900.1; (U20115) adpA-like protein [Mycobacterium; E=2e-08 COG: PA2337; COG2207 AraC-type DNA-binding domain-containing proteins; E=1e-10 BS_adaA; COG2169 Adenosine deaminase; E=1e-05 araC; COG2207 AraC-type DNA-binding domain-containing proteins; E=1e-05 PFAM: PF00165; Bacterial regulatory helix-turn-heli; E=1.4e-21; transcriptional regulator 5783360..5784292 Rhodopirellula baltica SH 1 1795302 NP_869539.1 CDS RB10656 NC_005027.1 5784251 5784517 R hypothetical protein complement(5784251..5784517) Rhodopirellula baltica SH 1 1792118 NP_869540.1 CDS RB10657 NC_005027.1 5784704 5784823 R hypothetical protein complement(5784704..5784823) Rhodopirellula baltica SH 1 1792999 NP_869541.1 CDS yahN NC_005027.1 5784820 5788650 R best DB hits: BLAST: pir:H69818; conserved hypothetical protein yhaN - Bacillus subtilis; E=2e-07 ddbj:BAB05865.1; (AP001514) BH2146~unknown conserved protein; E=0.002 pir:S56387; hypothetical protein f1107 - Escherichia coli -----; E=0.004 COG: BH2146; COG1511 Predicted membrane protein; E=2e-04 yjeP; COG3264 Small-conductance mechanosensitive channel; E=4e-04 PFAM: PF00005; ABC transporter; E=0.1; hypothetical protein complement(5784820..5788650) Rhodopirellula baltica SH 1 1794183 NP_869542.1 CDS RB10663 NC_005027.1 5788593 5789888 R best DB hits: BLAST: pir:A69819; probable phosphoesterase (EC 3.1.-.-) yhaO - Bacillus; E=3e-31 pir:E75103; DNA repair protein rad32 (rad32) PAB0811 - Pyrococcus; E=6e-07 gb:AAG60901.1; AF322013_20 (AF322013) ID473 [Bradyrhizobium; E=1e-05 COG: BS_yhaO; COG0420 DNA repair exonuclease; E=3e-32 PFAM: PF02549; DNA repair exonuclease; E=5.9e-18; phosphoesterase yhaO- DNA repair exonuclease complement(5788593..5789888) Rhodopirellula baltica SH 1 1790189 NP_869543.1 CDS RB10665 NC_005027.1 5789912 5790514 D best DB hits: BLAST: ddbj:BAB03764.1; (AP001507) signal peptidase-like protein; E=0.87; hypothetical protein 5789912..5790514 Rhodopirellula baltica SH 1 1790971 NP_869544.1 CDS RB10666 NC_005027.1 5790485 5796394 R best DB hits: BLAST: pir:F69009; probable membrane protein MTH1074 - Methanobacterium; E=1e-114 embl:CAA48444.1; (X68367) ORF5' [Methanobacterium; E=9e-18 pir:S30585; hypothetical protein 5 - Methanobacterium thermoformicicum; E=6e-17 PFAM: PF01345; Domain of unknown function DUF11; E=0.007; hypothetical protein complement(5790485..5796394) Rhodopirellula baltica SH 1 1790495 NP_869545.1 CDS RB10668 NC_005027.1 5796352 5796528 R hypothetical protein complement(5796352..5796528) Rhodopirellula baltica SH 1 1790939 NP_869546.1 CDS RB10670 NC_005027.1 5796491 5798362 R best DB hits: BLAST: pir:B83531; hypothetical protein PA0924 [imported] - Pseudomonas; E=1e-12 pir:D82055; conserved hypothetical protein VC2600 [imported] -; E=7e-06 gb:AAK03767.1; (AE006205) unknown [Pasteurella multocida]; E=0.12 COG: PA0924; COG3083 Predicted hydrolase of alkaline phosphatase; E=1e-13; hypothetical protein complement(5796491..5798362) Rhodopirellula baltica SH 1 1793101 NP_869547.1 CDS RB10672 NC_005027.1 5798359 5798598 R hypothetical protein complement(5798359..5798598) Rhodopirellula baltica SH 1 1793628 NP_869548.1 CDS RB10673 NC_005027.1 5798531 5799907 R best DB hits: BLAST: pir:S22614; hypothetical protein - Salmonella choleraesuis -----; E=9e-25; transmembrane protein complement(5798531..5799907) Rhodopirellula baltica SH 1 1790749 NP_869549.1 CDS RB10674 NC_005027.1 5799904 5800080 R hypothetical protein complement(5799904..5800080) Rhodopirellula baltica SH 1 1794675 NP_869550.1 CDS RB10675 NC_005027.1 5800168 5802507 R hypothetical protein complement(5800168..5802507) Rhodopirellula baltica SH 1 1794621 NP_869551.1 CDS RB10678 NC_005027.1 5802466 5802816 D hypothetical protein 5802466..5802816 Rhodopirellula baltica SH 1 1796110 NP_869552.1 CDS RB10679 NC_005027.1 5802930 5804603 D best DB hits: BLAST: pir:S00715; hypothetical protein - Calothrix sp ----- embl:; E=0.64; signal peptide 5802930..5804603 Rhodopirellula baltica SH 1 1796796 NP_869553.1 CDS RB10680 NC_005027.1 5804628 5806019 R best DB hits: PFAM: PF00534; Glycosyl transferases group 1; E=0.001; hypothetical protein complement(5804628..5806019) Rhodopirellula baltica SH 1 1794261 NP_869554.1 CDS RB10682 NC_005027.1 5805998 5807422 R signal peptide complement(5805998..5807422) Rhodopirellula baltica SH 1 1792700 NP_869555.1 CDS RB10683 NC_005027.1 5806079 5807173 D best DB hits: BLAST: gb:AAK03171.1; (AE006150) unknown [Pasteurella multocida]; E=4e-48 embl:CAB63312.1; (AL133471) hypothetical protein SCC82.03c; E=5e-48 swissprot:P45672; NIR3_AZOBR NIFR3-LIKE PROTEIN ----- pir:; E=1e-46 COG: BH0097; COG0042 Predicted TIM-barrel enzymes, possibly; E=2e-47 yhdG; COG0042 Predicted TIM-barrel enzymes, possibly dehydrogenases,; E=1e-42 RP011; COG0042 Predicted TIM-barrel enzymes, possibly; E=3e-41 PFAM: PF01207; Uncharacterized protein family UPF00; E=3.3e-79; hypothetical protein 5806079..5807173 Rhodopirellula baltica SH 1 1793018 NP_869556.1 CDS RB10686 NC_005027.1 5807477 5807791 D PMID: 12024217; hypothetical protein 5807477..5807791 Rhodopirellula baltica SH 1 1795331 NP_869557.1 CDS RB10687 NC_005027.1 5807486 5807884 R hypothetical protein complement(5807486..5807884) Rhodopirellula baltica SH 1 1795583 NP_869558.1 CDS RB10688 NC_005027.1 5807769 5807960 D hypothetical protein 5807769..5807960 Rhodopirellula baltica SH 1 1792264 NP_869559.1 CDS RB10689 NC_005027.1 5807950 5808207 R hypothetical protein complement(5807950..5808207) Rhodopirellula baltica SH 1 1790049 NP_869560.1 CDS RB10690 NC_005027.1 5808255 5809544 R best DB hits: BLAST: pir:T34936; hypothetical protein SC3F9.14 SC3F9.14 - Streptomyces; E=3e-83 pir:T36185; hypothetical protein SCE29.06c - Streptomyces coelicolor; E=2e-73 pir:B82537; phosphodiesterase-nucleotide pyrophosphatase precursor; E=0.094 COG: XF2599; COG1524 Uncharacterized proteins of the AP superfamily; E=0.009 PFAM: PF01663; Type I phosphodiesterase / nucle; E=0.18; hypothetical protein complement(5808255..5809544) Rhodopirellula baltica SH 1 1794105 NP_869561.1 CDS dagA NC_005027.1 5809698 5811395 D PMID: 1447975 best DB hits: BLAST: embl:CAC01597.1; (AL391041) amino acid transport; E=1e-90 gb:AAF12563.1; AE001826_32 (AE001826) Na(+)-linked D-alanine; E=5e-81 ddbj:BAB07752.1; (AP001520) amino acid transporter [Bacillus; E=4e-46 COG: DRB0133; COG1115 Na+/alanine symporter; E=4e-82 PFAM: PF02497; Arterivirus glycoprotein; E=0.45 PF00746; Gram positive anchor; E=0.031 PF01235; Sodium:alanine symporter fami; E=5.2e-96; Na(+)-linked D-alanine glycine permease 5809698..5811395 Rhodopirellula baltica SH 1 1789909 NP_869562.1 CDS RB10696 NC_005027.1 5811856 5812854 D hypothetical protein 5811856..5812854 Rhodopirellula baltica SH 1 1794173 NP_869563.1 CDS RB10697 NC_005027.1 5811978 5812436 R signal peptide complement(5811978..5812436) Rhodopirellula baltica SH 1 1790358 NP_869564.1 CDS RB10698 NC_005027.1 5812573 5813025 R hypothetical protein complement(5812573..5813025) Rhodopirellula baltica SH 1 1793370 NP_869565.1 CDS RB10699 NC_005027.1 5812882 5813082 D hypothetical protein 5812882..5813082 Rhodopirellula baltica SH 1 1794952 NP_869566.1 CDS tolQ NC_005027.1 5813102 5813809 D PMID: 8921895 best DB hits: BLAST: gb:AAK03054.1; (AE006136) TolQ [Pasteurella multocida]; E=3e-10 swissprot:P43768; TOLQ_HAEIN TOLQ PROTEIN ----- pir: I64064; E=7e-09 pir:PC4258; tolQ protein - Haemophilus influenzae (fragment) -----; E=2e-08 COG: HI0385; COG0811 Biopolymer transport proteins; E=7e-10 PFAM: PF01618; MotA/TolQ/ExbB proton channel famil; E=1.4e-18; TolQ 5813102..5813809 Rhodopirellula baltica SH 1 1793479 NP_869567.1 CDS RB10702 NC_005027.1 5813809 5814297 D PMID: 9781885 best DB hits: BLAST: pir:E82726; conserved hypothetical protein XF1080 [imported] -; E=0.007 swissprot:Q9ZHV9; EXD2_VIBCH BIOPOLYMER TRANSPORT EXBD2 PROTEIN; E=0.043 pir:B82858; biopolymer transport ExbD1 protein XF0011 [imported] -; E=0.16 COG: XF1080; COG0848 Biopolymer transport protein; E=7e-04 PFAM: PF02472; Biopolymer transport protein ExbD/To; E=5.3e-06; biopolymer transport exbD2 protein 5813809..5814297 Rhodopirellula baltica SH 1 1793595 NP_869568.1 CDS exbD NC_005027.1 5814372 5815151 D PMID: 9140974 best DB hits: BLAST: embl:CAB50919.1; (AJ243354) hypothetical protein [Pseudomonas; E=4e-05 pir:F83274; conserved hypothetical protein PA2982 [imported] -; E=7e-05 swissprot:O06434; EXBD_NEIGO BIOPOLYMER TRANSPORT EXBD PROTEIN; E=0.001 COG: PA2982; COG0848 Biopolymer transport protein; E=7e-06 PFAM: PF02472; Biopolymer transport protein ExbD/; E=8.9e-08; biopolymer transport exbD protein 5814372..5815151 Rhodopirellula baltica SH 1 1794720 NP_869569.1 CDS RB10706 NC_005027.1 5815264 5818653 D best DB hits: BLAST: pir:H69064; serinethreonine protein kinase related protein -; E=0.045 COG: MTH1485; COG1520 Uncharacterized proteins of WD40-like repeat family; E=0.004 PFAM: PF01011; PQQ enzyme repeat; E=0.009; serine/threonine protein kinase related protein- PQQ-dependent oxidoreductase 5815264..5818653 Rhodopirellula baltica SH 1 1791214 NP_869570.1 CDS RB10709 NC_005027.1 5818659 5821040 D best DB hits: BLAST: ddbj:BAA15142.1; (D90789) Periplasmic dipeptide transport protein; E=0.15 swissprot:P76128; YDDS_ECOLI BINDING PROTEIN YDDS; E=0.15 gb:AAG56282.1; AE005357_2 (AE005357) hemin-binding; E=0.15; periplasmic dipeptide transport protein precursor (dipeptide-binding protein) (DBP)- secreted, membrane associated or paryphoplasmic protein 5818659..5821040 Rhodopirellula baltica SH 1 1791124 NP_869571.1 CDS RB10710 NC_005027.1 5821022 5822908 D signal peptide 5821022..5822908 Rhodopirellula baltica SH 1 1793135 NP_869572.1 CDS ligA NC_005027.1 5822909 5825029 R PMID: 10407164 PMID: 10368271 best DB hits: BLAST: swissprot:O87703; DNLJ_BACST DNA LIGASE (POLYDEOXYRIBONUCLEOTIDE; E=1e-135 swissprot:O31498; DNLJ_BACSU DNA LIGASE (POLYDEOXYRIBONUCLEOTIDE; E=1e-135 swissprot:P15042; DNLJ_ECOLI DNA LIGASE (POLYDEOXYRIBONUCLEOTIDE; E=1e-133 COG: BS_yerG; COG0272 NAD-dependent DNA ligase (contains BRCT domain type; E=1e-136 lig; COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); E=1e-134 BH0649; COG0272 NAD-dependent DNA ligase (contains BRCT domain type; E=1e-134 PFAM: PF01653; NAD-dependent DNA ligase; E=4.3e-103 PF00633; Helix-hairpin-helix motif.; E=0.3 PF00533; BRCA1 C Terminus (BRCT) domain; E=9.8e-16; DNA ligase complement(5822909..5825029) Rhodopirellula baltica SH 1 1794855 NP_869573.1 CDS RB10712 NC_005027.1 5824976 5825230 D hypothetical protein 5824976..5825230 Rhodopirellula baltica SH 1 1794827 NP_869574.1 CDS RB10714 NC_005027.1 5825271 5825528 R signal peptide complement(5825271..5825528) Rhodopirellula baltica SH 1 1792714 NP_869575.1 CDS RB10716 NC_005027.1 5825657 5827027 R PMID: 11932238 best DB hits: BLAST: pir:C82804; conserved hypothetical protein XF0464 [imported] -; E=0.10 swissprot:Q9Z4J7; EXAA_PSEAE QUINOPROTEIN ETHANOL DEHYDROGENASE; E=0.29 pdb:1FLG; A Chain A, Crystal Structure Of The Quinoprotein Ethanol; E=0.29 COG: XF0464; COG1520 Uncharacterized proteins of WD40-like repeat family; E=0.009 PFAM: PF01011; PQQ enzyme repeat; E=0.0088; PQQ-dependent dehydrogenase complement(5825657..5827027) Rhodopirellula baltica SH 1 1790848 NP_869576.1 CDS RB10719 NC_005027.1 5827069 5827251 R hypothetical protein complement(5827069..5827251) Rhodopirellula baltica SH 1 1790289 NP_869577.1 CDS RB10721 NC_005027.1 5827264 5830629 D best DB hits: BLAST: pir:S56387; hypothetical protein f1107 - Escherichia coli -----; E=9e-35 swissprot:P39285; YJEP_ECOLI HYPOTHETICAL 123.8 KD PROTEIN IN; E=2e-34 gb:AAG59358.1; AE005649_3 (AE005649) periplasmic binding; E=2e-34 COG: yjeP; COG3264 Small-conductance mechanosensitive channel; E=2e-35 PA1408_2; COG0668 Small-conductance mechanosensitive channel; E=2e-15 PFAM: PF00924; Uncharacterized protein famil; E=2.9e-36; transmembrane channel protein 5827264..5830629 Rhodopirellula baltica SH 1 1795427 NP_869578.1 CDS RB10727 NC_005027.1 5830775 5831605 D PMID: 97094642 best DB hits: BLAST: ddbj:BAB05909.1; (AP001514) manganese-containing catalase; E=3e-62 swissprot:P80878; GS80_BACSU GENERAL STRESS PROTEIN 80 (GSP80); E=1e-61 pir:C69854; conserved hypothetical protein yjqC - Bacillus subtilis; E=2e-56; manganese-containing catalase 5830775..5831605 Rhodopirellula baltica SH 1 1793416 NP_869579.1 CDS RB10728 NC_005027.1 5831649 5832047 D signal peptide 5831649..5832047 Rhodopirellula baltica SH 1 1796887 NP_869580.1 CDS RB10729 NC_005027.1 5832028 5832246 D hypothetical protein 5832028..5832246 Rhodopirellula baltica SH 1 1794497 NP_869581.1 CDS RB10730 NC_005027.1 5832453 5832590 D hypothetical protein 5832453..5832590 Rhodopirellula baltica SH 1 1792395 NP_869582.1 CDS RB10731 NC_005027.1 5832569 5832682 D hypothetical protein 5832569..5832682 Rhodopirellula baltica SH 1 1792673 NP_869583.1 CDS fdh NC_005027.1 5832679 5833848 D PMID: 7926692 best DB hits: BLAST: swissprot:P47734; FADH_METMR GLUTATHIONE-DEPENDENT FORMALDEHYDE; E=1e-160 pir:A75593; alcohol dehydrogenase, zinc-containing - Deinococcus; E=1e-113 pir:B83373; probable alcohol dehydrogenase (Zn-dependent) PA2188; E=7e-84 COG: DRA0005; COG1063 Threonine dehydrogenase and related Zn-dependent; E=1e-114 sll0990; COG1062 Zn-dependent alcohol dehydrogenases, class III; E=7e-20 PFAM: PF00107; Zinc-binding dehydrogenases; E=3e-74; glutathione-dependent formaldehyde dehydrogenase 5832679..5833848 Rhodopirellula baltica SH 1 1795573 NP_869584.1 CDS RB10734 NC_005027.1 5833947 5834780 D signal peptide 5833947..5834780 Rhodopirellula baltica SH 1 1790075 NP_869585.1 CDS RB10735 NC_005027.1 5834722 5835720 D hypothetical protein 5834722..5835720 Rhodopirellula baltica SH 1 1795933 NP_869586.1 CDS RB10736 NC_005027.1 5835783 5835983 R hypothetical protein complement(5835783..5835983) Rhodopirellula baltica SH 1 1793149 NP_869587.1 CDS RB10740 NC_005027.1 5836025 5836372 R hypothetical protein complement(5836025..5836372) Rhodopirellula baltica SH 1 1793088 NP_869588.1 CDS RB10741 NC_005027.1 5836327 5836653 R hypothetical protein complement(5836327..5836653) Rhodopirellula baltica SH 1 1790154 NP_869589.1 CDS RB10742 NC_005027.1 5836632 5836955 R hypothetical protein complement(5836632..5836955) Rhodopirellula baltica SH 1 1795931 NP_869590.1 CDS RB10743 NC_005027.1 5836648 5836938 D hypothetical protein 5836648..5836938 Rhodopirellula baltica SH 1 1794308 NP_869591.1 CDS RB10745 NC_005027.1 5837016 5837183 D hypothetical protein 5837016..5837183 Rhodopirellula baltica SH 1 1793000 NP_869592.1 CDS RB10746 NC_005027.1 5837169 5838017 R hypothetical protein complement(5837169..5838017) Rhodopirellula baltica SH 1 1792983 NP_869593.1 CDS RB10749 NC_005027.1 5838000 5838227 D hypothetical protein 5838000..5838227 Rhodopirellula baltica SH 1 1793414 NP_869594.1 CDS RB10750 NC_005027.1 5838326 5838454 R hypothetical protein complement(5838326..5838454) Rhodopirellula baltica SH 1 1792975 NP_869595.1 CDS RB10751 NC_005027.1 5838430 5838561 D hypothetical protein 5838430..5838561 Rhodopirellula baltica SH 1 1790500 NP_869596.1 CDS RB10752 NC_005027.1 5838612 5838740 R hypothetical protein complement(5838612..5838740) Rhodopirellula baltica SH 1 1793940 NP_869597.1 CDS RB10753 NC_005027.1 5838793 5839371 D hypothetical protein 5838793..5839371 Rhodopirellula baltica SH 1 1793988 NP_869598.1 CDS RB10754 NC_005027.1 5839301 5839483 D hypothetical protein 5839301..5839483 Rhodopirellula baltica SH 1 1794606 NP_869599.1 CDS RB10755 NC_005027.1 5839451 5839576 R hypothetical protein complement(5839451..5839576) Rhodopirellula baltica SH 1 1794862 NP_869600.1 CDS RB10757 NC_005027.1 5839548 5842730 R hypothetical protein complement(5839548..5842730) Rhodopirellula baltica SH 1 1790184 NP_869601.1 CDS RB10761 NC_005027.1 5842631 5844493 R hypothetical protein complement(5842631..5844493) Rhodopirellula baltica SH 1 1794329 NP_869602.1 CDS RB10763 NC_005027.1 5844490 5844687 R hypothetical protein complement(5844490..5844687) Rhodopirellula baltica SH 1 1796864 NP_869603.1 CDS RB10764 NC_005027.1 5844684 5845271 R hypothetical protein complement(5844684..5845271) Rhodopirellula baltica SH 1 1793016 NP_869604.1 CDS RB10766 NC_005027.1 5844819 5845508 D hypothetical protein 5844819..5845508 Rhodopirellula baltica SH 1 1791108 NP_869605.1 CDS hsdS NC_005027.1 5845264 5846916 R PMID: 2642743 best DB hits: BLAST: swissprot:P19705; T1SE_ECOLI TYPE I RESTRICTION ENZYME ECOEI; E=5e-22 swissprot:P05719; T1SK_ECOLI TYPE I RESTRICTION ENZYME ECOKI; E=2e-18 swissprot:P06990; T1SB_ECOLI TYPE I RESTRICTION ENZYME ECOBI; E=1e-16 COG: hsdS; COG0732 Restriction endonuclease S subunits; E=1e-19 PFAM: PF01420; Type I restriction modification D; E=4.3e-18; type I restriction enzyme EcoEI specificity protein complement(5845264..5846916) Rhodopirellula baltica SH 1 1793710 NP_869606.1 CDS hsdM NC_005027.1 5846913 5848436 R PMID: 1409708 PMID: 3025838 best DB hits: BLAST: swissprot:P07989; T1M_SALPO TYPE I RESTRICTION ENZYME STYSPI M; E=1e-135 gb:AAA23985.1; (L02508) restriction-modification enzyme type I M; E=1e-134 swissprot:P08957; T1MK_ECOLI TYPE I RESTRICTION ENZYME ECOKI M; E=1e-134 COG: hsdM; COG0286 Type I restriction-modification system; E=1e-135 PFAM: PF02506; Type I restriction modification s; E=0.00016 PF02384; N-6 DNA Methylase; E=7.2e-40; type I restriction enzyme StySPI M protein complement(5846913..5848436) Rhodopirellula baltica SH 1 1790327 NP_869607.1 CDS hsdR NC_005027.1 5848458 5851874 R restriction endonuclease; the EcoKI enzyme recognizes 5'-AACN(6)GTGC-3'; subunit R is required for both nuclease and ATPase activities; type I restriction enzyme EcoKI subunit R complement(5848458..5851874) Rhodopirellula baltica SH 1 1791501 NP_869608.1 CDS RB10772 NC_005027.1 5851969 5852352 D hypothetical protein 5851969..5852352 Rhodopirellula baltica SH 1 1796923 NP_869609.1 CDS RB10774 NC_005027.1 5852378 5852968 D hypothetical protein 5852378..5852968 Rhodopirellula baltica SH 1 1790832 NP_869610.1 CDS RB10775 NC_005027.1 5852981 5853157 D hypothetical protein 5852981..5853157 Rhodopirellula baltica SH 1 1795886 NP_869611.1 CDS RB10776 NC_005027.1 5853194 5853529 R hypothetical protein complement(5853194..5853529) Rhodopirellula baltica SH 1 1790156 NP_869612.1 CDS RB10778 NC_005027.1 5853522 5855129 R best DB hits: BLAST: embl:CAC08270.1; (AL392146) ATP-binding protein; E=4e-28; ATP-binding protein complement(5853522..5855129) Rhodopirellula baltica SH 1 1795588 NP_869613.1 CDS RB10780 NC_005027.1 5855126 5855425 R hypothetical protein complement(5855126..5855425) Rhodopirellula baltica SH 1 1790979 NP_869614.1 CDS RB10783 NC_005027.1 5855472 5856872 R hypothetical protein complement(5855472..5856872) Rhodopirellula baltica SH 1 1790458 NP_869615.1 CDS RB10785 NC_005027.1 5857037 5858326 R best DB hits: PFAM: PF00589; Phage integrase; E=0.063; hypothetical protein complement(5857037..5858326) Rhodopirellula baltica SH 1 1795303 NP_869616.1 CDS RB10787 NC_005027.1 5858568 5860031 R best DB hits: BLAST: pir:A72236; hypothetical protein TM1585 - Thermotoga maritima; E=8e-33 pir:B71162; hypothetical protein PH0495 - Pyrococcus horikoshii; E=6e-30 swissprot:Q44472; TUD4_AGRVI HYDROXYPYRUVATE REDUCTASE; E=5e-29 COG: TM1585; COG2379 glycerate kinase; E=8e-34; glycerate kinase complement(5858568..5860031) Rhodopirellula baltica SH 1 1795300 NP_869617.1 CDS RB10789 NC_005027.1 5859980 5860573 R best DB hits: BLAST: pir:S75290; hypothetical protein sll1289 - Synechocystis sp. (strain; E=2e-50 pir:G70687; hypothetical protein Rv1732c - Mycobacterium; E=2e-41 gb:AAF87891.1; AC015447_1 (AC015447) Hypothetical protein; E=3e-37 COG: sll1289; COG0526 Thiol-disulfide isomerase and thioredoxins; E=2e-51 Rv2521; COG1225 Peroxiredoxins; E=4e-06 NMB1958; COG0526 Thiol-disulfide isomerase and thioredoxins; E=0.004 PFAM: PF00578; AhpC/TSA family; E=0.0023; alkyl hydroperoxide reductase complement(5859980..5860573) Rhodopirellula baltica SH 1 1795596 NP_869618.1 CDS fabI NC_005027.1 5860620 5861519 R PMID: 8075395 PMID: 8953047 PMID: 10493822 best DB hits: BLAST: gb:AAD04184.1; (L10036) unknown [Nostoc sp. PCC 7120]; E=2e-60 swissprot:Q05069; FABI_ANASP ENOYL-[ACYL-CARRIER-PROTEIN]; E=2e-60 pir:H81284; probable enoyl-[acyl-carrier-protein] reductase [NADH]; E=1e-55 COG: Cj1400c; COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH); E=9e-57 BH1511; COG1028 Dehydrogenases with different specificities (related; E=2e-16 BS_yhdF; COG1028 Dehydrogenases with different specificities; E=2e-15 PFAM: PF00106; short chain dehydrogenase; E=0.019 PF00678; Short chain dehydrogenase/reduct; E=2.3e-07; enoyl-ACP reductase complement(5860620..5861519) Rhodopirellula baltica SH 1 1794774 NP_869619.1 CDS RB10793 NC_005027.1 5861653 5863617 D best DB hits: BLAST: pir:C83055; probable two-component response regulator PA4726; E=2e-58 gb:AAG59807.1; AF305914_2 (AF305914) HydG [Klebsiella oxytoca]; E=2e-58 pir:T08624; probable NtrC-type response regulator - Eubacterium; E=3e-58 COG: PA4726; COG2204 AAA superfamily ATPases with N-terminal receiver; E=2e-59 PA2359; COG1221 NtrC family transcriptional regulators, ATPase; E=2e-58 VC1926; COG2204 AAA superfamily ATPases with N-terminal receiver; E=2e-57 PFAM: PF01590; GAF domain; E=1.1e-13 PF00158; Sigma-54 interaction domain; E=1e-128; two-component response regulator 5861653..5863617 Rhodopirellula baltica SH 1 1793308 NP_869620.1 CDS RB10797 NC_005027.1 5863798 5864613 D best DB hits: BLAST: pir:A71552; probable lysophospholipase esterase - Chlamydia; E=4e-08 pir:F81704; serine esterase, probable TC0413 [imported] - Chlamydia; E=6e-08 pir:D72098; serine esterase, probable CP0488 [imported] -; E=1e-06 COG: CT136; COG0400 Predicted esterase; E=4e-09 PFAM: PF02230; Phospholipase/Carboxylesterase; E=0.68; lysophospholipase esterase 5863798..5864613 Rhodopirellula baltica SH 1 1790758 NP_869621.1 CDS RB10799 NC_005027.1 5864610 5867177 D hypothetical protein 5864610..5867177 Rhodopirellula baltica SH 1 1790295 NP_869622.1 CDS RB10801 NC_005027.1 5867012 5869543 D best DB hits: BLAST: embl:CAB37418.1; (AJ224978) ORF 245 [Salmonella typhimurium]; E=0.002 gb:AAG31761.1; (AF282268) unknown [Salmonella enterica serovar; E=0.23; transmembrane protein 5867012..5869543 Rhodopirellula baltica SH 1 1790818 NP_869623.1 CDS RB10805 NC_005027.1 5869621 5870781 D PMID: 88038383 best DB hits: BLAST: swissprot:Q09669; ADHF_SCHPO IRON ALCOHOL DEHYDROGENASE; E=5e-46 gb:AAD43989.1; U59485_16 (U59485) AttL [Agrobacterium tumefaciens]; E=5e-45 gb:AAG58733.1; AE005585_7 (AE005585) oxidoreductase; E=6e-42 COG: yiaY; COG1454 Alcohol dehydrogenase IV; E=3e-42 PFAM: PF00465; Iron-containing alcohol dehydrogenas; E=3.3e-58; iron alcohol dehydrogenase 5869621..5870781 Rhodopirellula baltica SH 1 1794353 NP_869624.1 CDS RB10806 NC_005027.1 5870789 5871349 D hypothetical protein 5870789..5871349 Rhodopirellula baltica SH 1 1792865 NP_869625.1 CDS RB10808 NC_005027.1 5871407 5871757 R hypothetical protein complement(5871407..5871757) Rhodopirellula baltica SH 1 1790515 NP_869626.1 CDS RB10810 NC_005027.1 5871764 5872048 R hypothetical protein complement(5871764..5872048) Rhodopirellula baltica SH 1 1796860 NP_869627.1 CDS RB10814 NC_005027.1 5872089 5873717 R signal peptide complement(5872089..5873717) Rhodopirellula baltica SH 1 1794641 NP_869628.1 CDS holB NC_005027.1 5873941 5875071 R best DB hits: BLAST: pir:C75278; DNA polymerase III, taugamma subunit - Deinococcus; E=2e-23 gb:AAB82595.1; (AF025391) DNA polymerase III holoenzyme tau; E=4e-22 pir:A70460; DNA polymerase III gamma subunit - Aquifex aeolicus; E=9e-21 COG: DR2410; COG2812 DNA polymerase III, gamma/tau subunits; E=2e-24 NMB0769; COG0470 ATPase involved in DNA replication; E=1e-19 Cj1157; COG2812 DNA polymerase III, gamma/tau subunits; E=4e-18 PFAM: PF00448; SRP54-type protein, GTPase domain; E=0.64 PF00004; ATPase associated with vario; E=0.0033; DNA polymerase III, tau/gamma subunit complement(5873941..5875071) Rhodopirellula baltica SH 1 1795278 NP_869629.1 CDS rpiB NC_005027.1 5875075 5875548 R PMID: 8576032 best DB hits: BLAST: ddbj:BAB07486.1; (AP001519) ribose 5-phosphate epimerase (pentose; E=3e-30 pir:H70397; ribose 5-phosphate isomerase B - Aquifex aeolicus; E=9e-29 embl:CAA07515.1; (AJ007446) hypothetical protein [Thermotoga; E=7e-27 COG: BH3767; COG0698 Ribose 5-phosphate isomerase RpiB; E=2e-31 PFAM: PF02502; Ribose/Galactose Isomerase; E=1.1e-35; ribose 5-phosphate epimerase (pentose phosphate) complement(5875075..5875548) Rhodopirellula baltica SH 1 1793250 NP_869630.1 CDS RB10818 NC_005027.1 5875552 5876937 R PMID: 7798145 best DB hits: BLAST: swissprot:P39155; YWLE_BACSU LOW MOLECULAR WEIGHT; E=1e-13 swissprot:Q45408; EPSP_BURSO PROBABLE LOW MOLECULAR WEIGHT; E=3e-10 ddbj:BAB07488.1; (AP001519) protein-tyrosine-phosphatase; E=1e-09 COG: BS_ywlE; COG0394 Protein-tyrosine-phosphatase; E=1e-14 VC1079; COG0009 translation factor (SUA5); E=2e-06 BH2998; COG0394 Protein-tyrosine-phosphatase; E=8e-05 PFAM: PF01300; SUA5/yciO/yrdC family; E=0.14 PF01451; Low molecular weight phosphoty; E=2.2e-28; low molecular weight protein-tyrosine-phosphatase ywlE complement(5875552..5876937) Rhodopirellula baltica SH 1 1795541 NP_869631.1 CDS RB10820 NC_005027.1 5876924 5877973 D best DB hits: BLAST: swissprot:Q03601; YMB4_CAEEL HYPOTHETICAL 109.1 KDA PROTEIN; E=6e-23 ddbj:BAA83343.1; (AB030912) RING finger protein HAC1 [Mus; E=8e-16 gb:AAC17997.1; (AF036255) RING finger protein [Rattus norvegicus]; E=1e-15 PFAM: PF01436; NHL repeat; E=0.00042; ring finger protein HAC1 5876924..5877973 Rhodopirellula baltica SH 1 1790409 NP_869632.1 CDS RB10821 NC_005027.1 5877977 5878132 D hypothetical protein 5877977..5878132 Rhodopirellula baltica SH 1 1791101 NP_869633.1 CDS RB10823 NC_005027.1 5878083 5878859 R signal peptide complement(5878083..5878859) Rhodopirellula baltica SH 1 1793539 NP_869634.1 CDS RB10824 NC_005027.1 5878877 5878999 D hypothetical protein 5878877..5878999 Rhodopirellula baltica SH 1 1790752 NP_869635.1 CDS RB10825 NC_005027.1 5878996 5879280 D hypothetical protein 5878996..5879280 Rhodopirellula baltica SH 1 1795639 NP_869636.1 CDS clpP NC_005027.1 5879229 5879912 D PMID: 9383193 best DB hits: BLAST: gb:AAD31002.1; AF127082_1 (AF127082) ATP-dependent protease; E=2e-52 swissprot:Q60107; CLPP_YEREN ATP-DEPENDENT CLP PROTEASE; E=1e-48 swissprot:Q9WZF9; CLPP_THEMA ATP-DEPENDENT CLP PROTEASE; E=1e-48 COG: TM0695; COG0740 Protease subunit of ATP-dependent Clp proteases; E=1e-49 PFAM: PF00574; Clp protease; E=5e-76; ATP-dependent Clp protease proteolytic subunit 5879229..5879912 Rhodopirellula baltica SH 1 1791253 NP_869637.1 CDS clpP NC_005027.1 5879971 5880558 D PMID: 10360571 best DB hits: BLAST: swissprot:Q9WZF9; CLPP_THEMA ATP-DEPENDENT CLP PROTEASE; E=7e-69 swissprot:Q60107; CLPP_YEREN ATP-DEPENDENT CLP PROTEASE; E=5e-68 ddbj:BAA94668.1; (AB033628) serine protease subunit [Salmonella; E=9e-68 COG: TM0695; COG0740 Protease subunit of ATP-dependent Clp proteases; E=7e-70 PFAM: PF00378; Enoyl-CoA hydratase/isomerase fa; E=0.064 PF00574; Clp protease; E=1.5e-111; ATP-dependent Clp protease proteolytic subunit 5879971..5880558 Rhodopirellula baltica SH 1 1791513 NP_869638.1 CDS RB10832 NC_005027.1 5880714 5880980 D hypothetical protein 5880714..5880980 Rhodopirellula baltica SH 1 1793205 NP_869639.1 CDS argH NC_005027.1 5881054 5883036 R PMID: 2121708 PMID: 10984043 best DB hits: BLAST: pir:B81175; argininosuccinate lyase NMB0637 [imported] - Neisseria; E=1e-110 pir:C81930; probable argininosuccinate lyase (EC 4.3.2.1) NMA0847; E=1e-110 swissprot:P50987; ARLY_PSEAE ARGININOSUCCINATE LYASE; E=1e-107 COG: NMB0637; COG0165 Argininosuccinate lyase; E=1e-111 PAB0829; COG0015 Adenylosuccinate lyase; E=5e-14 PFAM: PF00206; Lyase; E=3.2e-82; argininosuccinate lyase complement(5881054..5883036) Rhodopirellula baltica SH 1 1793620 NP_869640.1 CDS RB10835 NC_005027.1 5882524 5885532 D best DB hits: BLAST: gb:AAG17720.1; AF286114_1 (AF286114) PAK-like protein kinase; E=0.82; hypothetical protein 5882524..5885532 Rhodopirellula baltica SH 1 1793765 NP_869641.1 CDS RB10839 NC_005027.1 5885632 5887179 R best DB hits: BLAST: pir:T36293; probable serinethreonine protein kinase - Streptomyces; E=0.15 gb:AAG20933.1; (AE005160) Vng6297c [Halobacterium sp. NRC-1]; E=0.24 pir:C82804; conserved hypothetical protein XF0464 [imported] -; E=0.56 PFAM: PF01011; PQQ enzyme repeat; E=0.045; serine/threonine protein kinase complement(5885632..5887179) Rhodopirellula baltica SH 1 1794986 NP_869642.1 CDS celD NC_005027.1 5887124 5888455 D PMID: 7860585 best DB hits: BLAST: pir:I39710; cellulose biosynthesis protein celD - Agrobacterium; E=4e-05 embl:CAB92279.1; (AL356595) hypothetical protein [Streptomyces; E=0.001 PFAM: PF02572; ATP:corrinoid adenosyltransfer; E=0.094; cellulose biosynthesis protein celD 5887124..5888455 Rhodopirellula baltica SH 1 1791173 NP_869643.1 CDS RB10844 NC_005027.1 5888421 5889197 D best DB hits: PFAM: PF00583; Acetyltransferase (GNAT) family; E=2.3e-12; signal peptide 5888421..5889197 Rhodopirellula baltica SH 1 1790532 NP_869644.1 CDS RB10845 NC_005027.1 5889180 5890121 R hypothetical protein complement(5889180..5890121) Rhodopirellula baltica SH 1 1790130 NP_869645.1 CDS RB10848 NC_005027.1 5890118 5890996 R hypothetical protein complement(5890118..5890996) Rhodopirellula baltica SH 1 1791779 NP_869646.1 CDS RB10851 NC_005027.1 5890993 5891601 R hypothetical protein complement(5890993..5891601) Rhodopirellula baltica SH 1 1793624 NP_869647.1 CDS gatB NC_005027.1 5891768 5893261 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B complement(5891768..5893261) Rhodopirellula baltica SH 1 1795561 NP_869648.1 CDS RB10853 NC_005027.1 5893328 5894194 R PMID: 9389475 best DB hits: BLAST: gb:AAB89497.1; (AE000982) lysophospholipase [Archaeoglobus; E=2e-10 pir:D69998; lysophospholipase homolog ytpA - Bacillus subtilis; E=1e-05 embl:CAA64113.1; (X94355) M5L [Cowpox virus] ----- embl:; E=2e-05 COG: AF1753; COG2267 Lysophospholipase; E=2e-11 PFAM: PF00561; alpha/beta hydrolase fold; E=6.7e-09; lysophospholipase complement(5893328..5894194) Rhodopirellula baltica SH 1 1794610 NP_869649.1 CDS RB10855 NC_005027.1 5894191 5895378 R PMID: 8990288 best DB hits: BLAST: pir:H69855; chloromuconate cycloisomerase homolog ykfB - Bacillus; E=7e-22 pir:T51250; chloromuconate cycloisomerase homolog ykfB [imported] -; E=3e-19 ddbj:BAB06725.1; (AP001517) muconate cycloisomerase [Bacillus; E=3e-19 COG: BS_ykfB; COG1441 O-succinylbenzoate synthase and related enzymes; E=6e-23 PFAM: PF01188; Mandelate racemase / muconate; E=3.6e-27; muconate cycloisomerase I complement(5894191..5895378) Rhodopirellula baltica SH 1 1795309 NP_869650.1 CDS RB10858 NC_005027.1 5895365 5896372 R PMID: 10984043 best DB hits: BLAST: pir:H83099; probable oxidoreductase PA4361 [imported] - Pseudomonas; E=3e-24 pir:T34919; oxidoreductase - Streptomyces coelicolor ----- embl:; E=3e-18 pir:E82632; NAD(P)H steroid dehydrogenase XF1825 [imported] -; E=9e-16 COG: PA4361; COG0451 Nucleoside-diphosphate-sugar epimerases; E=3e-25 slr0836; COG1088 dTDP-D-glucose 4,6-dehydratase; E=6e-04 Rv3784; COG0451 Nucleoside-diphosphate-sugar epimerases; E=0.004 PFAM: PF00106; short chain dehydrogenase; E=0.0018 PF01073; 3-beta hydroxysteroid dehydro; E=4.1e-08 PF01370; NAD dependent epimerase/dehyd; E=1.7e-06; oxidoreductase complement(5895365..5896372) Rhodopirellula baltica SH 1 1794297 NP_869651.1 CDS RB10860 NC_005027.1 5896538 5896828 R hypothetical protein complement(5896538..5896828) Rhodopirellula baltica SH 1 1792632 NP_869652.1 CDS RB10861 NC_005027.1 5896851 5896991 D hypothetical protein 5896851..5896991 Rhodopirellula baltica SH 1 1791573 NP_869653.1 CDS RB10862 NC_005027.1 5896997 5898142 D PMID: 8316082 best DB hits: BLAST: swissprot:Q07833; WAPA_BACSU WALL-ASSOCIATED PROTEIN PRECURSOR; E=4e-09 pir:JS0625; rhsD protein - Escherichia coli ----- gb: AAA24544.1; E=1e-08 swissprot:P16919; RHSD_ECOLI RHSD PROTEIN PRECURSOR ----- pir:; E=1e-08 COG: BS_wapA; COG3209 Rhs family protein; E=4e-10; wall-associated protein 5896997..5898142 Rhodopirellula baltica SH 1 1794828 NP_869654.1 CDS RB10864 NC_005027.1 5898139 5899083 D hypothetical protein 5898139..5899083 Rhodopirellula baltica SH 1 1795601 NP_869655.1 CDS RB10866 NC_005027.1 5899043 5899291 R hypothetical protein complement(5899043..5899291) Rhodopirellula baltica SH 1 1791696 NP_869656.1 CDS RB10867 NC_005027.1 5899359 5899982 D signal peptide 5899359..5899982 Rhodopirellula baltica SH 1 1791049 NP_869657.1 CDS RB10868 NC_005027.1 5899920 5900330 R hypothetical protein complement(5899920..5900330) Rhodopirellula baltica SH 1 1794558 NP_869658.1 CDS RB10871 NC_005027.1 5900233 5900871 R hypothetical protein complement(5900233..5900871) Rhodopirellula baltica SH 1 1794590 NP_869659.1 CDS RB10874 NC_005027.1 5900865 5901032 R hypothetical protein complement(5900865..5901032) Rhodopirellula baltica SH 1 1793924 NP_869660.1 CDS RB10875 NC_005027.1 5901043 5901192 R hypothetical protein complement(5901043..5901192) Rhodopirellula baltica SH 1 1795367 NP_869661.1 CDS uvrA NC_005027.1 5901251 5903770 R PMID: 12000953 best DB hits: BLAST: swissprot:Q9Z507; UVRA_STRCO EXCINUCLEASE ABC SUBUNIT A -----; E=1e-132 swissprot:O34863; UVRA_BACSU EXCINUCLEASE ABC SUBUNIT A -----; E=1e-131 swissprot:Q56242; UVRA_THETH EXCINUCLEASE ABC SUBUNIT A -----; E=1e-130 COG: BS_uvrA; COG0178 Excinuclease ATPase subunit; E=1e-132 PFAM: PF01443; Viral (Superfamily 1) RNA hel; E=0.46 PF00005; ABC transporter; E=0.2; excinuclease ABC subunit A complement(5901251..5903770) Rhodopirellula baltica SH 1 1792808 NP_869662.1 CDS RB10877 NC_005027.1 5903767 5905128 R best DB hits: PFAM: PF02517; CAAX amino terminal protease; E=0.2; hypothetical protein complement(5903767..5905128) Rhodopirellula baltica SH 1 1790440 NP_869663.1 CDS pgsA NC_005027.1 5905125 5905859 R PMID: 7750561 best DB hits: BLAST: ddbj:BAB06105.1; (AP001515) phosphatidylglycerophosphate synthase; E=7e-20 pir:I39950; pgsA protein - Bacillus subtilis ----- ddbj:; E=5e-16 swissprot:P46322; PGSA_BACSU; E=5e-15 COG: BH2386; COG0558 Phosphatidylglycerophosphate synthase; E=7e-21 PFAM: PF01066; CDP-alcohol phosphatidyltrans; E=1.1e-21; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(5905125..5905859) Rhodopirellula baltica SH 1 1790674 NP_869664.1 CDS RB10880 NC_005027.1 5905907 5907340 R PMID: 9537320 best DB hits: BLAST: swissprot:O67016; Y849_AQUAE HYPOTHETICAL PROTEIN AQ_849 -----; E=1e-87 swissprot:Q55803; Y082_SYNY3 HYPOTHETICAL 49.4 KD PROTEIN SLR0082; E=4e-84 swissprot:P75802; YLIG_ECOLI HYPOTHETICAL 49.6 KDA PROTEIN IN; E=1e-76 COG: aq_849; COG0621 Fe-S oxidoreductases family 1; E=9e-89 PFAM: PF00919; Uncharacterized protein family UPF00; E=3.2e-35; 2-methylthioadenine synthetase complement(5905907..5907340) Rhodopirellula baltica SH 1 1791553 NP_869665.1 CDS RB10881 NC_005027.1 5907337 5907645 R hypothetical protein complement(5907337..5907645) Rhodopirellula baltica SH 1 1793210 NP_869666.1 CDS lysS NC_005027.1 5907588 5909228 D best DB hits: BLAST: swissprot:Q53638; SYK_STAAU LYSYL-TRNA SYNTHETASE (LYSINE--TRNA; E=1e-116 swissprot:P37477; SYK_BACSU LYSYL-TRNA SYNTHETASE (LYSINE--TRNA; E=1e-114 swissprot:Q9KGG4; SYK_BACHD LYSYL-TRNA SYNTHETASE (LYSINE--TRNA; E=1e-111 COG: BS_lysS; COG1190 Lysyl-tRNA synthetase class II; E=1e-115 PFAM: PF01336; OB-fold nucleic acid binding dom; E=5.9e-12 PF01409; tRNA synthetases class II (F); E=0.46 PF00152; tRNA synthetases class II (D, K; E=7e-136; lysyl-tRNA synthetase 5907588..5909228 Rhodopirellula baltica SH 1 1796815 NP_869667.1 CDS RB10884 NC_005027.1 5909299 5909517 R hypothetical protein complement(5909299..5909517) Rhodopirellula baltica SH 1 1793306 NP_869668.1 CDS RB10886 NC_005027.1 5909525 5909932 R signal peptide complement(5909525..5909932) Rhodopirellula baltica SH 1 1789897 NP_869669.1 CDS RB10887 NC_005027.1 5909943 5911772 R PMID: 9163424 best DB hits: BLAST: swissprot:P74178; YB78_SYNY3 HYPOTHETICAL 69.1 KD PROTEIN SLL1178; E=1e-175 gb:AAK00162.1; AF222753_17 (AF222753) nodulation protein NolO; E=8e-78 swissprot:P55474; NOLO_RHISN NODULATION PROTEIN NOLNO -----; E=1e-76 COG: sll1178; COG2192 Predicted carbamoyl transferase, NodU family; E=1e-176 PFAM: PF02543; Carbamoyltransferase; E=4.4e-130; carbamyltransferase BlmD complement(5909943..5911772) Rhodopirellula baltica SH 1 1790282 NP_869670.1 CDS RB10890 NC_005027.1 5911782 5912018 R hypothetical protein complement(5911782..5912018) Rhodopirellula baltica SH 1 1795711 NP_869671.1 CDS RB10891 NC_005027.1 5911978 5912151 D hypothetical protein 5911978..5912151 Rhodopirellula baltica SH 1 1790076 NP_869672.1 CDS RB10892 NC_005027.1 5912176 5914878 D PMID: 8590279 best DB hits: BLAST: swissprot:P54148; Y537_SYNY3 AMMONIUM TRANSPORTER SLL0537; E=9e-88 swissprot:P54147; Y108_SYNY3 AMMONIUM TRANSPORTER SLL0108; E=1e-70 gb:AAB89503.1; (AE000982) ammonium transporter (amt-2); E=2e-66 COG: sll0537; COG0004 Ammonia permeases; E=8e-89 VC1084; COG0642 Sensory transduction histidine kinases; E=2e-33 MTH661; COG0004 Ammonia permeases; E=1e-32 PFAM: PF00909; Ammonium Transporter Family; E=1.9e-133 PF00512; His Kinase A (phosphoacceptor; E=6.1e-05 PF02518; Histidine kinase-, DNA gyrase; E=3.7e-25; ammonium transporter 5912176..5914878 Rhodopirellula baltica SH 1 1796892 NP_869673.1 CDS RB10893 NC_005027.1 5914894 5915067 D hypothetical protein 5914894..5915067 Rhodopirellula baltica SH 1 1794301 NP_869674.1 CDS thrC NC_005027.1 5915024 5916394 R PMID: 8706836 best DB hits: BLAST: pir:S71362; threonine synthase (EC 4.2.99.2) precursor - Arabidopsis; E=1e-126 pir:T08545; threonine synthase (EC 4.2.99.2) precursor - Arabidopsis; E=1e-126 gb:AAF74984.1; AF082894_1 (AF082894) threonine synthase [Solanum; E=1e-125 COG: MJ1465; COG0498 Threonine synthase; E=7e-58 PFAM: PF00291; Pyridoxal-phosphate dependent enzyme; E=2.1e-62; threonine synthase complement(5915024..5916394) Rhodopirellula baltica SH 1 1794204 NP_869675.1 CDS RB10895 NC_005027.1 5916348 5917151 D hypothetical protein 5916348..5917151 Rhodopirellula baltica SH 1 1796862 NP_869676.1 CDS RB10896 NC_005027.1 5916555 5917040 R signal peptide complement(5916555..5917040) Rhodopirellula baltica SH 1 1795936 NP_869677.1 CDS RB10898 NC_005027.1 5917309 5918409 D PMID: 10360571 best DB hits: BLAST: pir:A72417; sugar ABC transporter, periplasmic sugar-binding protein; E=2e-17 ddbj:BAB07559.1; (AP001520) sugar ABC transporter (sugar-binding; E=3e-15 ddbj:BAB07167.1; (AP001518) sugar ABC transporter (sugar-binding; E=4e-09 COG: TM0114; COG1879 Periplasmic sugar-binding proteins; E=2e-18; sugar ABC transporter, periplasmic sugar-binding protein 5917309..5918409 Rhodopirellula baltica SH 1 1792644 NP_869678.1 CDS RB10902 NC_005027.1 5918562 5918819 D hypothetical protein 5918562..5918819 Rhodopirellula baltica SH 1 1793268 NP_869679.1 CDS RB10905 NC_005027.1 5918945 5919703 R PMID: 9679194 best DB hits: BLAST: pir:H71040; probable phosphoesterase (EC 3.1.-.-) PH1616 -; E=1e-26 swissprot:Q58322; Y912_METJA HYPOTHETICAL PROTEIN MJ0912 -----; E=8e-25 pir:A75174; hypothetical protein PAB1999 - Pyrococcus abyssi (strain; E=2e-24 COG: PH1616; COG0639 Diadenosine tetraphosphatase and related; E=1e-27; phosphoesterase complement(5918945..5919703) Rhodopirellula baltica SH 1 1796101 NP_869680.1 CDS RB10907 NC_005027.1 5919708 5920466 R best DB hits: BLAST: swissprot:Q58322; Y912_METJA HYPOTHETICAL PROTEIN MJ0912 -----; E=7e-31 pir:H71040; probable phosphoesterase (EC 3.1.-.-) PH1616 -; E=2e-26 pir:A75174; hypothetical protein PAB1999 - Pyrococcus abyssi (strain; E=4e-25 COG: MJ0912; COG0639 Diadenosine tetraphosphatase and related; E=7e-32 PFAM: PF01143; Uncharacterized phosphoesterase fami; E=0.086; phosphoesterase complement(5919708..5920466) Rhodopirellula baltica SH 1 1792389 NP_869681.1 CDS RB10909 NC_005027.1 5920575 5921378 D hypothetical protein 5920575..5921378 Rhodopirellula baltica SH 1 1790970 NP_869682.1 CDS RB10911 NC_005027.1 5921462 5923135 R best DB hits: BLAST: gb:AAA96788.1; (U51683) OMP1 precursor [Brucella abortus]; E=1e-14 pir:C70412; outer membrane protein - Aquifex aeolicus ----- gb:; E=5e-12 pir:H83190; probable outer membrane protein PA3648 [imported] -; E=1e-10 COG: aq_1300; COG0729 Predicted outer membrane protein; E=5e-13 PFAM: PF01103; Bacterial surface antigen; E=0.00093; hypothetical protein complement(5921462..5923135) Rhodopirellula baltica SH 1 1791070 NP_869683.1 CDS RB10916 NC_005027.1 5923132 5924643 R PMID: 9403685 best DB hits: BLAST: pir:B70199; outer membrane protein homolog - Lyme disease spirochete; E=6e-17 pir:C70412; outer membrane protein - Aquifex aeolicus ----- gb:; E=3e-16 gb:AAA96788.1; (U51683) OMP1 precursor [Brucella abortus]; E=2e-15 COG: BB0795; COG0729 Predicted outer membrane protein; E=6e-18 PFAM: PF01103; Bacterial surface antigen; E=1.3e-16; hypothetical protein complement(5923132..5924643) Rhodopirellula baltica SH 1 1794794 NP_869684.1 CDS RB10919 NC_005027.1 5924636 5924824 D hypothetical protein 5924636..5924824 Rhodopirellula baltica SH 1 1790073 NP_869685.1 CDS RB10920 NC_005027.1 5924859 5925719 R hypothetical protein complement(5924859..5925719) Rhodopirellula baltica SH 1 1792556 NP_869686.1 CDS RB10921 NC_005027.1 5925810 5926664 R PMID: 9163424 best DB hits: BLAST: swissprot:P55607; Y4OV_RHISN HYPOTHETICAL 30.2 KD PROTEIN Y4OV; E=8e-81 ddbj:BAB10918.1; (AB013389) gene_id:K1F13.7~similar to unknown; E=6e-75 gb:AAG60875.1; AF322012_180 (AF322013) ID407 [Bradyrhizobium; E=2e-29 PFAM: PF01884; PcrB family; E=0.34; transcriptional regulator Y4PA complement(5925810..5926664) Rhodopirellula baltica SH 1 1793611 NP_869687.1 CDS RB10922 NC_005027.1 5926686 5927933 R best DB hits: BLAST: swissprot:P55606; Y4OU_RHISN HYPOTHETICAL PROTEIN Y4OU PRECURSOR; E=3e-85 ddbj:BAB10918.1; (AB013389) gene_id:K1F13.7~similar to unknown; E=1e-80; hypothetical protein complement(5926686..5927933) Rhodopirellula baltica SH 1 1792369 NP_869688.1 CDS RB10923 NC_005027.1 5927928 5928035 D hypothetical protein 5927928..5928035 Rhodopirellula baltica SH 1 1795506 NP_869689.1 CDS RB10924 NC_005027.1 5928118 5933337 R PMID: 8497190 best DB hits: BLAST: swissprot:Q02998; YH19_RHOCA HYPOTHETICAL 104.1 KD PROTEIN IN HYPE; E=2e-90 pir:H83132; probable sensorresponse regulator hybrid PA4112; E=7e-67 pir:S75136; sensory transduction histidine kinase slr2104 -; E=4e-64 COG: VC1349_2; COG0642 Sensory transduction histidine kinases; E=2e-49 PFAM: PF01339; CheB methylesterase; E=1.5e-09 PF01739; CheR methyltransferase; E=7e-68 PF00989; PAS domain; E=1.2e-05; sensor/response regulator hybrid complement(5928118..5933337) Rhodopirellula baltica SH 1 1792630 NP_869690.1 CDS RB10926 NC_005027.1 5933431 5933547 R hypothetical protein complement(5933431..5933547) Rhodopirellula baltica SH 1 1791152 NP_869691.1 CDS RB10927 NC_005027.1 5933490 5933741 D hypothetical protein 5933490..5933741 Rhodopirellula baltica SH 1 1790081 NP_869692.1 CDS RB10929 NC_005027.1 5933631 5933993 R hypothetical protein complement(5933631..5933993) Rhodopirellula baltica SH 1 1794406 NP_869693.1 CDS RB10931 NC_005027.1 5933742 5933906 D hypothetical protein 5933742..5933906 Rhodopirellula baltica SH 1 1793472 NP_869694.1 CDS RB10932 NC_005027.1 5933872 5934069 D signal peptide 5933872..5934069 Rhodopirellula baltica SH 1 1792812 NP_869695.1 CDS RB10934 NC_005027.1 5934135 5934341 D best DB hits: BLAST: pir:F83054; conserved hypothetical protein PA4738 [imported] -; E=1e-05 swissprot:P32691; YJBJ_ECOLI PROTEIN YJBJ ----- pir: D65212; E=2e-05 embl:CAB98302.2; (AL390114) probable 8.3 Kd protein in dinf-qor; E=0.032 COG: PA4738; COG3237 Uncharacterized BCR; E=1e-06; hypothetical protein 5934135..5934341 Rhodopirellula baltica SH 1 1791355 NP_869696.1 CDS RB10936 NC_005027.1 5934348 5934518 D hypothetical protein 5934348..5934518 Rhodopirellula baltica SH 1 1795905 NP_869697.1 CDS RB10937 NC_005027.1 5934376 5934561 R hypothetical protein complement(5934376..5934561) Rhodopirellula baltica SH 1 1791003 NP_869698.1 CDS RB10939 NC_005027.1 5934628 5934816 D PMID: 10567266 best DB hits: BLAST: pir:H75351; conserved hypothetical protein - Deinococcus radiodurans; E=3e-06 gb:AAG20306.1; (AE005104) Vng2170h [Halobacterium sp. NRC-1]; E=0.81 COG: DR1804; COG1396 Predicted transcriptional regulators; E=3e-07; transcriptional regulator 5934628..5934816 Rhodopirellula baltica SH 1 1793426 NP_869699.1 CDS RB10940 NC_005027.1 5934856 5935407 D PMID: 11248100 best DB hits: BLAST: gb:AAK03637.1; (AE006192) unknown [Pasteurella multocida]; E=7e-25 gb:AAG50796.1; AC074309_13 (AC074309) unknown protein [Arabidopsis; E=0.009 pir:T36821; hypothetical protein SCI35.08c - Streptomyces coelicolor; E=0.15 PFAM: PF00583; Acetyltransferase (GNAT) family; E=6.2e-09; acetyltransferase 5934856..5935407 Rhodopirellula baltica SH 1 1792313 NP_869700.1 CDS ogt NC_005027.1 5935417 5937012 R PMID: 9083067 best DB hits: BLAST: swissprot:P56558; OGT1_RAT UDP-N-ACETYLGLUCOSAMINE--PEPTIDE; E=9e-05 gb:AAF31458.1; (AF223393) HRNT1 [Homo sapiens]; E=9e-05 gb:AAA62535.1; (U21320) contains TPR domain-like repeats; E=0.003 PFAM: PF00515; TPR Domain; E=0.00017; TPR repeat-containing protein complement(5935417..5937012) Rhodopirellula baltica SH 1 1794370 NP_869701.1 CDS RB10944 NC_005027.1 5937047 5937241 R hypothetical protein complement(5937047..5937241) Rhodopirellula baltica SH 1 1793202 NP_869702.1 CDS RB10945 NC_005027.1 5937215 5938453 D hypothetical protein 5937215..5938453 Rhodopirellula baltica SH 1 1793743 NP_869703.1 CDS RB10948 NC_005027.1 5938575 5939036 D best DB hits: BLAST: pir:T30321; hypothetical protein - Lactococcus lactis plasmid; E=0.015; hypothetical protein 5938575..5939036 Rhodopirellula baltica SH 1 1793614 NP_869704.1 CDS RB10950 NC_005027.1 5939124 5939825 D signal peptide 5939124..5939825 Rhodopirellula baltica SH 1 1794960 NP_869705.1 CDS RB10951 NC_005027.1 5939927 5940232 R hypothetical protein complement(5939927..5940232) Rhodopirellula baltica SH 1 1795285 NP_869706.1 CDS RB10954 NC_005027.1 5940318 5940749 R hypothetical protein complement(5940318..5940749) Rhodopirellula baltica SH 1 1795405 NP_869707.1 CDS RB10956 NC_005027.1 5940336 5940689 D hypothetical protein 5940336..5940689 Rhodopirellula baltica SH 1 1794090 NP_869708.1 CDS RB10957 NC_005027.1 5940708 5941007 D best DB hits: BLAST: pir:F75258; hypothetical protein - Deinococcus radiodurans (strain; E=3e-16 pir:T35249; hypothetical protein SC5F2A.07 - Streptomyces coelicolor; E=4e-04; hypothetical protein 5940708..5941007 Rhodopirellula baltica SH 1 1794832 NP_869709.1 CDS RB10958 NC_005027.1 5941015 5941491 D best DB hits: PFAM: PF01226; Formate/nitrite transporter; E=0.8; hypothetical protein 5941015..5941491 Rhodopirellula baltica SH 1 1795266 NP_869710.1 CDS RB10960 NC_005027.1 5941602 5942021 D best DB hits: BLAST: pir:D75324; hypothetical protein - Deinococcus radiodurans (strain; E=7e-14 pir:C83546; hypothetical protein PA0806 [imported] - Pseudomonas; E=9e-11 embl:CAB92195.1; (AL356592) membrane protein.; E=0.13; transmembrane protein 5941602..5942021 Rhodopirellula baltica SH 1 1794063 NP_869711.1 CDS gufA NC_005027.1 5942116 5942730 D best DB hits: BLAST: pir:C70127; gufA protein homolog - Lyme disease spirochete -----; E=2e-05 pir:T29905; hypothetical protein F59A3.4 - Caenorhabditis elegans; E=0.002 pir:E75052; gufA protein homolog PAB1443 - Pyrococcus abyssi (strain; E=0.027 COG: BB0219; COG0428 Predicted divalent heavy-metal cations transporter; E=2e-06; divalent heavy-metal cations transporter 5942116..5942730 Rhodopirellula baltica SH 1 1790198 NP_869712.1 CDS RB10966 NC_005027.1 5942752 5942934 R best DB hits: BLAST: ddbj:BAA95845.1; (AP002070) Similar to Arabidopsis thaliana low; E=0.053 gb:AAF26091.1; AC012393_17 (AC012393) low temperature and salt; E=0.069 gb:AAF26090.1; AC012393_16 (AC012393) low temperature and salt; E=0.088 PFAM: PF01679; Uncharacterized protein family UPF00; E=1.8e-13; signal peptide complement(5942752..5942934) Rhodopirellula baltica SH 1 1791234 NP_869713.1 CDS RB10967 NC_005027.1 5943015 5944040 R best DB hits: BLAST: embl:CAB62729.1; (AL133423) oxidoreductase [Streptomyces; E=1e-81 gb:AAG19273.1; (AE005023) quinone oxidoreductase; YfmJ; E=1e-77 pir:A69813; quinone oxidoreductase homolog yfmJ - Bacillus subtilis; E=6e-76 COG: VNG0815G; COG2130 NADP-dependent oxidoreductases; E=1e-78 PA5234; COG0604 NADPH:quinone reductase and related Zn-dependent; E=5e-10 Ta0841; COG1064 Zn-dependent alcohol dehydrogenases; E=2e-05 PFAM: PF00022; Actin; E=0.28 PF00107; Zinc-binding dehydrogenases; E=7.7e-37; oxidoreductase complement(5943015..5944040) Rhodopirellula baltica SH 1 1791470 NP_869714.1 CDS gabD NC_005027.1 5944044 5945417 R PMID: 8297211 best DB hits: BLAST: swissprot:O32507; GABD_DEIRA SUCCINATE-SEMIALDEHYDE DEHYDROGENASE; E=1e-118 gb:AAD19405.1; (AF102543) succinic semialdehyde dehydrogenase; E=1e-111 swissprot:Q55585; GABD_SYNY3 PROBABLE SUCCINATE-SEMIALDEHYDE; E=1e-107 COG: DRA0343; COG1012 NAD-dependent aldehyde dehydrogenases; E=1e-119 PFAM: PF00171; Aldehyde dehydrogenase; E=2.7e-118; succinate-semialdehyde dehydrogenase [NADP+] complement(5944044..5945417) Rhodopirellula baltica SH 1 1793698 NP_869715.1 CDS dltE NC_005027.1 5945495 5946406 R best DB hits: BLAST: pir:H83564; probable short-chain dehydrogenase PA0658 [imported] -; E=1e-42 pir:E70761; probable ketoacyl reductase - Mycobacterium tuberculosis; E=8e-38 gb:AAK03000.1; (AE006130) unknown [Pasteurella multocida]; E=4e-34 COG: PA0658; COG0300 Short-chain dehydrogenases of various substrate; E=1e-43 Rv1050; COG1028 Dehydrogenases with different specificities (related; E=5e-23 YMR226c; COG0300 Short-chain dehydrogenases of various substrate; E=2e-22 PFAM: PF00106; short chain dehydrogenase; E=1.6e-45; short-chain dehydrogenase complement(5945495..5946406) Rhodopirellula baltica SH 1 1793612 NP_869716.1 CDS RB10973 NC_005027.1 5946410 5946523 R hypothetical protein complement(5946410..5946523) Rhodopirellula baltica SH 1 1793164 NP_869717.1 CDS RB10974 NC_005027.1 5946559 5947263 D hypothetical protein 5946559..5947263 Rhodopirellula baltica SH 1 1792705 NP_869718.1 CDS sugE NC_005027.1 5947515 5947883 D PMID: 8096175 best DB hits: BLAST: pir:S36340; sugE protein - Escherichia coli ----- embl:; E=6e-17 gb:AAG59349.1; AE005648_11 (AE005648) suppresses groEL, may be; E=4e-16 pir:S56376; sugES protein - Escherichia coli ----- gb:; E=6e-16 COG: sugE; COG2076 Membrane transporters of cations and cationic drugs; E=6e-17 NMB0393; COG2076 Membrane transporters of cations and cationic; E=6e-04 BH0840; COG2076 Membrane transporters of cations and cationic drugs; E=0.004 PFAM: PF00893; Integral membrane protein DUF7; E=3e-37; sugE protein- transmembrane protein 5947515..5947883 Rhodopirellula baltica SH 1 1790240 NP_869719.1 CDS RB10979 NC_005027.1 5947956 5948414 R best DB hits: BLAST: pir:S62728; transposase - phage D3112 ----- embl: CAA60956.1; E=0.69; hypothetical protein complement(5947956..5948414) Rhodopirellula baltica SH 1 1794069 NP_869720.1 CDS RB10980 NC_005027.1 5948527 5948844 R hypothetical protein complement(5948527..5948844) Rhodopirellula baltica SH 1 1790850 NP_869721.1 CDS mtrC NC_005027.1 5948851 5950653 D PMID: 8196548 best DB hits: BLAST: swissprot:P43505; MTRC_NEIGO MEMBRANE FUSION PROTEIN MTRC; E=3e-07 pir:S40252; MtrC protein - Neisseria gonorrhoeae ----- pir:; E=4e-07 pir:H81825; membrane fusion protein NMA1970 [imported] - Neisseria; E=1e-06 COG: NMB1716; COG0845 Membrane-fusion protein; E=1e-07 PA2430; COG1566 Multidrug resistance efflux pump; E=5e-05 PA4599; COG0845 Membrane-fusion protein; E=6e-04 PFAM: PF00529; HlyD family secretion protein; E=0.061; membrane fusion protein mtrC 5948851..5950653 Rhodopirellula baltica SH 1 1794155 NP_869722.1 CDS acrD NC_005027.1 5950650 5953997 D best DB hits: BLAST: pir:B83627; probable RND efflux transporter PA0158 [imported] -; E=9e-84 pir:F82829; acriflavin resistance protein XF0243 [imported] - Xylella; E=1e-81 pir:B82604; cation efflux system protein XF2083 [imported] - Xylella; E=6e-77 COG: PA0158; COG0841 Cation/multidrug efflux pump; E=8e-85 PFAM: PF00873; AcrB/AcrD/AcrF family; E=8.1e-17; RND efflux transporter 5950650..5953997 Rhodopirellula baltica SH 1 1790123 NP_869723.1 CDS RB10985 NC_005027.1 5954010 5954633 R best DB hits: BLAST: ddbj:BAB06554.1; (AP001516) BH2835~unknown conserved protein; E=5e-27 swissprot:P54168; YPGQ_BACSU HYPOTHETICAL 23.1 KD PROTEIN IN; E=7e-22 gb:AAK04163.1; AE006245_2 (AE006245) conserved hypothetical; E=6e-17 COG: BH2835; COG1418 Predicted HD superfamily hydrolase; E=5e-28 AF1423; COG1078 HD superfamily phosphohydrolases; E=0.002 PFAM: PF01966; HD domain; E=3.6e-12; hypothetical protein complement(5954010..5954633) Rhodopirellula baltica SH 1 1791595 NP_869724.1 CDS RB10987 NC_005027.1 5954713 5955597 D best DB hits: BLAST: ddbj:BAB04002.1; (AP001508) BH0283~unknown conserved protein; E=2e-62 pir:E83199; conserved hypothetical protein PA3578 [imported] -; E=3e-55 pir:A83301; hypothetical protein PA2770 [imported] - Pseudomonas; E=8e-52 COG: BH0283; COG0384 Predicted epimerase, PhzC/PhzF homolog; E=2e-63 PFAM: PF02567; Phenazine biosynthesis-like pro; E=1.5e-27 PF01678; Diaminopimelate epimerase; E=0.53; hypothetical protein 5954713..5955597 Rhodopirellula baltica SH 1 1792920 NP_869725.1 CDS RB10989 NC_005027.1 5955627 5956076 D PMID: 9835490 best DB hits: BLAST: embl:CAA08848.1; (AJ009820) hypothetical protein [Salmonella; E=2e-16 gb:AAG17708.1; AF282595_4 (AF282595) unknown [Klebsiella; E=2e-16 pir:S74655; hypothetical protein sll1671 - Synechocystis sp. (strain; E=2e-15 COG: sll1671; COG0454 Histone acetyltransferase HPA2 and related; E=2e-16 PFAM: PF00583; Acetyltransferase (GNAT) family; E=3.9e-17; acetyltransferase 5955627..5956076 Rhodopirellula baltica SH 1 1790691 NP_869726.1 CDS RB10991 NC_005027.1 5956313 5956789 D best DB hits: BLAST: pir:T36405; probable marR-family transcriptional regulator -; E=2e-04 gb:AAG00065.1; (U18133) CbaR [Comamonas testosteroni]; E=8e-04 pir:T29126; hypothetical protein SC1F2.17 - Streptomyces coelicolor; E=0.002 COG: XF0216; COG1846 Transcriptional regulators; E=4e-04 PFAM: PF01047; MarR family; E=2.9e-14; MarR family transcriptional regulator 5956313..5956789 Rhodopirellula baltica SH 1 1793478 NP_869727.1 CDS RB10992 NC_005027.1 5956746 5956949 R hypothetical protein complement(5956746..5956949) Rhodopirellula baltica SH 1 1793866 NP_869728.1 CDS sigG NC_005027.1 5956958 5957677 D best DB hits: BLAST: gb:AAD42769.1; AF121849_1 (AF121849) SigG [Synechococcus sp. PCC; E=9e-12 pir:S77368; transcription initiation factor sigma E slr1545 -; E=1e-11 pir:C82583; RNA polymerase sigma-H factor XF2239 [imported] -; E=1e-08 COG: slr1545; COG1595 DNA-directed RNA polymerase specialized sigma; E=1e-12 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=0.00072 PF00140; Sigma-70 factor; E=0.028; RNA-polymerase sigma-E factor 5956958..5957677 Rhodopirellula baltica SH 1 1795234 NP_869729.1 CDS RB10995 NC_005027.1 5957741 5960086 D best DB hits: BLAST: pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=8e-35 ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=4e-34 pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=9e-34 COG: BH2504_1; COG0515 Serine/threonine protein kinases; E=3e-35 PFAM: PF00069; Protein kinase domain; E=5.1e-31; serine/threonine protein kinase 5957741..5960086 Rhodopirellula baltica SH 1 1796924 NP_869730.1 CDS RB10996 NC_005027.1 5960143 5961429 D best DB hits: BLAST: gb:AAD39269.1; AC007203_1 (AC007203) UDP-glucose:sterol; E=9e-62 embl:CAB06082.1; (Z83833) UDP-glucose:sterol glucosyltransferase; E=9e-59 gb:AAF27006.1; AC016827_17 (AC016827) UDP-glucose:sterol; E=9e-59 COG: YLR189c_2; COG1819 Glycosyl transferases, related to; E=4e-51; UDP-glucose:sterol glucosyltransferase 5960143..5961429 Rhodopirellula baltica SH 1 1790324 NP_869731.1 CDS RB10998 NC_005027.1 5961422 5961580 D hypothetical protein 5961422..5961580 Rhodopirellula baltica SH 1 1792693 NP_869732.1 CDS cft NC_005027.1 5961577 5963355 D PMID: 11157277 best DB hits: BLAST: gb:AAG47946.1; AF222787_1 (AF222787) cycloinulo-oligosaccharide; E=2e-04 pir:T35944; probable beta-galactosidase - Streptomyces coelicolor; E=5e-04 pir:T18266; cycloinulo-oligosaccharide fructanotransferase (EC; E=0.030 PFAM: PF02012; BNR repeat; E=0.23; cycloinulo-oligosaccharide fructanotransferase 5961577..5963355 Rhodopirellula baltica SH 1 1794643 NP_869733.1 CDS RB11000 NC_005027.1 5963380 5964054 R signal peptide complement(5963380..5964054) Rhodopirellula baltica SH 1 1793195 NP_869734.1 CDS RB11001 NC_005027.1 5964047 5964931 R hypothetical protein complement(5964047..5964931) Rhodopirellula baltica SH 1 1795557 NP_869735.1 CDS celP NC_005027.1 5964938 5966887 R best DB hits: BLAST: embl:CAB76936.1; (AJ275974) cellulosomal protein; E=6e-11 swissprot:Q45535; COTH_BACSU INNER SPORE COAT PROTEIN H -----; E=0.77; hypothetical protein complement(5964938..5966887) Rhodopirellula baltica SH 1 1789916 NP_869736.1 CDS RB11008 NC_005027.1 5967078 5968262 D best DB hits: BLAST: ddbj:BAB10498.1; (AB013391) cycloartenol synthase [Arabidopsis; E=0.18; cycloartenol synthase 5967078..5968262 Rhodopirellula baltica SH 1 1792755 NP_869737.1 CDS piuB NC_005027.1 5969036 5969752 R PMID: 8633080 best DB hits: BLAST: gb:AAC06216.1; (AF051690) iron-uptake factor [Pseudomonas; E=5e-17 pir:C83081; probable oxidoreductase PA4513 [imported] - Pseudomonas; E=5e-17 pir:B82329; sulfite reductase (NADPH) flavoprotein alpha-component; E=3e-10 COG: PA4513_2; COG0369 Sulfite reductase flavoprotein subunit; E=7e-17 VC0002; COG0716 Flavodoxins; E=2e-05 PFAM: PF00258; Flavodoxin; E=4.7e-29; iron-uptake factor- FMN-dependent oxidoreductase complement(5969036..5969752) Rhodopirellula baltica SH 1 1794315 NP_869738.1 CDS RB11010 NC_005027.1 5969749 5970585 R PMID: 20365717 best DB hits: BLAST: pir:E82786; hypothetical protein XF0595 [imported] - Xylella; E=2e-63 pir:A81079; conserved hypothetical protein NMB1475 [imported] -; E=0.33 pir:A81864; probable NMA1686 [imported] - Neisseria meningitidis; E=0.79; hypothetical protein complement(5969749..5970585) Rhodopirellula baltica SH 1 1790300 NP_869739.1 CDS RB11011 NC_005027.1 5970582 5971127 R PMID: 20365717 best DB hits: BLAST: pir:F82786; conserved hypothetical protein XF0596 [imported] -; E=4e-45 pir:G75353; hypothetical protein - Deinococcus radiodurans (strain; E=3e-08; hypothetical protein complement(5970582..5971127) Rhodopirellula baltica SH 1 1792652 NP_869740.1 CDS RB11013 NC_005027.1 5971146 5971802 R PMID: 20365717 best DB hits: BLAST: pir:G82786; conserved hypothetical protein XF0597 [imported] -; E=2e-46 gb:AAG02156.1; AF212041_12 (AF212041) plasmolipin [Zymomonas; E=1e-20 pir:F75353; hypothetical protein - Deinococcus radiodurans (strain; E=1e-09 COG: XF0597; COG3295 Uncharacterized BCR; E=2e-47; hypothetical protein complement(5971146..5971802) Rhodopirellula baltica SH 1 1793105 NP_869741.1 CDS RB11015 NC_005027.1 5971828 5972916 R best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide complement(5971828..5972916) Rhodopirellula baltica SH 1 1791417 NP_869742.1 CDS RB11016 NC_005027.1 5973102 5974211 R best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide complement(5973102..5974211) Rhodopirellula baltica SH 1 1795280 NP_869743.1 CDS RB11019 NC_005027.1 5974141 5974374 R hypothetical protein complement(5974141..5974374) Rhodopirellula baltica SH 1 1795462 NP_869744.1 CDS RB11021 NC_005027.1 5974498 5975385 R PMID: 8843436 best DB hits: BLAST: embl:CAC10293.1; (AL442629) ABC transport system ATP; E=3e-49 embl:CAB81857.1; (AL161691) ABC-transporter ATP-binding; E=6e-48 embl:CAB89461.1; (AL354048) ABC transporter ATP-binding; E=5e-47 COG: AF1469; COG1136 ABC-type (unclassified) transport system, ATPase; E=3e-47 PFAM: PF00485; Phosphoribulokinase / Uridine; E=0.21 PF00005; ABC transporter; E=2.1e-56; ABC transport system ATP binding protein complement(5974498..5975385) Rhodopirellula baltica SH 1 1793706 NP_869745.1 CDS RB11023 NC_005027.1 5975424 5975603 R hypothetical protein complement(5975424..5975603) Rhodopirellula baltica SH 1 1790727 NP_869746.1 CDS fes NC_005027.1 5975602 5977248 D PMID: 11694506 best DB hits: BLAST: pir:B83340; hypothetical protein PA2451 [imported] - Pseudomonas; E=2e-32 swissprot:O51900; FES_ERWCH ENTEROCHELIN ESTERASE (FERRIC; E=6e-20 gb:AAC46181.1; (U97227) ferric enterochelin esterase homolog; E=2e-18 COG: PA2451; COG2382 Enterochelin esterase and related enzymes; E=2e-33; enterochelin esterase 5975602..5977248 Rhodopirellula baltica SH 1 1793369 NP_869747.1 CDS RB11027 NC_005027.1 5977270 5980077 R PMID: 8843436 best DB hits: BLAST: embl:CAC09551.1; (AL442120) ABC transport system; E=1e-06 pir:G70821; hypothetical protein Rv0987 - Mycobacterium tuberculosis; E=0.005 ddbj:BAB06840.1; (AP001517) BH3121~unknown conserved protein; E=0.011 COG: Rv0987_1; COG0577 Predicted permease; E=8e-04 PFAM: PF02687; Predicted permease; E=3.3e-13; ABC transporter complement(5977270..5980077) Rhodopirellula baltica SH 1 1794408 NP_869748.1 CDS RB11030 NC_005027.1 5980074 5980829 R PMID: 9389475 best DB hits: BLAST: gb:AAB89781.1; (AE001001) ABC transporter ATP-binding protein; E=2e-46 embl:CAB89461.1; (AL354048) ABC transporter ATP-binding; E=2e-45 embl:CAC10293.1; (AL442629) ABC transport system ATP; E=3e-45 COG: AF1469; COG1136 ABC-type (unclassified) transport system, ATPase; E=2e-47 PFAM: PF01580; FtsK/SpoIIIE family; E=0.7 PF00485; Phosphoribulokinase / Uridine ki; E=0.21 PF00005; ABC transporter; E=7.9e-61; ABC transporter ATP-binding protein complement(5980074..5980829) Rhodopirellula baltica SH 1 1791748 NP_869749.1 CDS RB11031 NC_005027.1 5980865 5981053 D hypothetical protein 5980865..5981053 Rhodopirellula baltica SH 1 1792373 NP_869750.1 CDS RB11033 NC_005027.1 5981108 5984020 D PMID: 8843436 best DB hits: BLAST: embl:CAB89462.1; (AL354048) ABC transporter integral; E=2e-16 embl:CAC09551.1; (AL442120) ABC transport system; E=2e-11 embl:CAB62838.1; (AL133443) hypothetical protein L5529.07; E=3e-04 COG: AF1017; COG0577 Predicted permease; E=3e-05 PFAM: PF02687; Predicted permease; E=2.3e-12; ABC transporter integral membrane protein 5981108..5984020 Rhodopirellula baltica SH 1 1793862 NP_869751.1 CDS ntrC NC_005027.1 5984197 5985609 R PMID: 7602583 PMID: 7827089 PMID: 10512705 PMID: 10622255 best DB hits: BLAST: pir:E83006; two-component response regulator NtrC PA5125 [imported]; E=9e-89 swissprot:P41789; NTRC_SALTY NITROGEN REGULATION PROTEIN NR(I); E=1e-85 gb:AAG59057.1; AE005617_6 (AE005617) response regulator for gln; E=2e-85 COG: PA5125; COG2204 AAA superfamily ATPases with N-terminal receiver; E=8e-90 PFAM: PF00072; Response regulator receiver doma; E=1e-31 PF00158; Sigma-54 interaction domain; E=2.1e-114; nitrogen regulation protein NR(I) complement(5984197..5985609) Rhodopirellula baltica SH 1 1795547 NP_869752.1 CDS ntrB NC_005027.1 5985617 5987098 R PMID: 7553451 best DB hits: BLAST: pir:A82630; two-component system, sensor protein XF1849 [imported] -; E=1e-11 pir:S35265; ntrB protein - Azospirillum brasilense ----- embl:; E=1e-11 swissprot:P45670; NTRB_AZOBR NITROGEN REGULATION PROTEIN NTRB; E=3e-11 COG: XF1849; COG0642 Sensory transduction histidine kinases; E=1e-12 PFAM: PF00672; HAMP domain; E=9.9e-11 PF00512; His Kinase A (phosphoacceptor) doma; E=0.00015 PF02518; Histidine kinase-, DNA gyrase B-, p; E=4.8e-20; nitrogen regulation protein ntrB complement(5985617..5987098) Rhodopirellula baltica SH 1 1792731 NP_869753.1 CDS RB11041 NC_005027.1 5987234 5988283 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 5987234..5988283 Rhodopirellula baltica SH 1 1794787 NP_869754.1 CDS RB11043 NC_005027.1 5988389 5989402 D PMID: 9734815 best DB hits: BLAST: ddbj:BAB09005.1; (AB012239) gene_id:K11J9.14~unknown protein; E=0.63 PFAM: PF00036; EF hand; E=0.00096; hypothetical protein 5988389..5989402 Rhodopirellula baltica SH 1 1791535 NP_869755.1 CDS RB11047 NC_005027.1 5989573 5990562 R PMID: 10984043 best DB hits: BLAST: pir:G83341; hypothetical protein PA2428 [imported] - Pseudomonas; E=1e-102 gb:AAB09718.1; (U12891) ORF1 [Pseudomonas aeruginosa]; E=1e-101 pir:B82287; conserved hypothetical protein VC0728 [imported] -; E=2e-81 COG: PA2428; COG2326 Uncharacterized BCR; E=1e-103; hypothetical protein complement(5989573..5990562) Rhodopirellula baltica SH 1 1790954 NP_869756.1 CDS RB11049 NC_005027.1 5990489 5990713 R hypothetical protein complement(5990489..5990713) Rhodopirellula baltica SH 1 1795679 NP_869757.1 CDS nptA NC_005027.1 5990726 5991910 R PMID: 7478940 best DB hits: BLAST: pir:D82295; nptA protein VC0676 [imported] - Vibrio cholerae (group; E=9e-73 gb:AAC42026.1; (L33878) renal cortical Na+Pi co-transporter [Mus; E=1e-18 gb:AAC52361.1; (U22465) NaPi-cotransporter [Mus musculus]; E=1e-18 COG: VC0676; COG1283 Na+/phosphate symporter; E=9e-74 PFAM: PF02659; Domain of unknown function DUF; E=0.051 PF02690; Na+/Pi-cotransporter; E=2.8e-96; nptA protein complement(5990726..5991910) Rhodopirellula baltica SH 1 1794324 NP_869758.1 CDS RB11052 NC_005027.1 5991855 5992130 R PMID: 9634230 best DB hits: BLAST: pir:E70933; hypothetical protein Rv0574c - Mycobacterium; E=0.88; hypothetical protein complement(5991855..5992130) Rhodopirellula baltica SH 1 1794548 NP_869759.1 CDS RB11055 NC_005027.1 5992248 5994449 R PMID: 10470850 best DB hits: BLAST: ddbj:BAB09588.1; (AB018118) gene_id:MRI1.6~pir D64592~similar to; E=7e-09 pir:G83627; probable nucleoside hydrolase PA0143 [imported] -; E=0.010 COG: PA0143; COG1957 Inosine-uridine nucleoside N-ribohydrolase; E=0.001 PFAM: PF01156; Inosine-uridine preferring nucle; E=0.022 PF02012; BNR repeat; E=0.32; hypothetical protein complement(5992248..5994449) Rhodopirellula baltica SH 1 1791068 NP_869760.1 CDS RB11060 NC_005027.1 5994448 5994648 D hypothetical protein 5994448..5994648 Rhodopirellula baltica SH 1 1791307 NP_869761.1 CDS RB11062 NC_005027.1 5994714 5995358 R hypothetical protein complement(5994714..5995358) Rhodopirellula baltica SH 1 1791239 NP_869762.1 CDS sul1 NC_005027.1 5995455 5997761 R PMID: 10984043 best DB hits: BLAST: pir:B70979; hypothetical protein Rv3273 - Mycobacterium tuberculosis; E=2e-36 pir:D83631; probable sulfate transporter PA0103 [imported] -; E=3e-31 ddbj:BAB20551.1; (AB040415) Mig5 [Salmonella enterica serovar; E=9e-24 COG: PA0103; COG0659 Sulfate permease and related transporters (MFS; E=2e-32 DR2238; COG0288 Carbonic anhydrase; E=2e-24 slr0096; COG0659 Sulfate permease and related transporters (MFS; E=4e-15 PFAM: PF00916; Sulfate transporter family; E=1.5e-39 PF00484; Carbonic anhydrase; E=5.9e-12 PF02878; Phosphoglucomutase/phosphomann; E=0.17; sulfate transporter complement(5995455..5997761) Rhodopirellula baltica SH 1 1793837 NP_869763.1 CDS RB11065 NC_005027.1 5997794 5998018 D hypothetical protein 5997794..5998018 Rhodopirellula baltica SH 1 1795220 NP_869764.1 CDS RB11067 NC_005027.1 5998015 5998308 R signal peptide complement(5998015..5998308) Rhodopirellula baltica SH 1 1796830 NP_869765.1 CDS nhaP NC_005027.1 5998517 6000286 R the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter complement(5998517..6000286) Rhodopirellula baltica SH 1 1790931 NP_869766.1 CDS RB11070 NC_005027.1 6000321 6000479 D hypothetical protein 6000321..6000479 Rhodopirellula baltica SH 1 1792267 NP_869767.1 CDS acrB NC_005027.1 6000550 6003768 R PMID: 8905231 PMID: 8407802 PMID: 7651136 best DB hits: BLAST: pir:F83335; RND multidrug efflux transporter MexF PA2494 [imported] -; E=0.0 pir:T30830; hypothetical protein mexF - Pseudomonas aeruginosa -----; E=0.0 pir:D83206; probable RND efflux transporter PA3522 [imported] -; E=0.0 COG: PA2494; COG0841 Cation/multidrug efflux pump; E=0.0 PFAM: PF00873; AcrB/AcrD/AcrF family; E=0; acriflavine resistance protein B complement(6000550..6003768) Rhodopirellula baltica SH 1 1795564 NP_869768.1 CDS acrA NC_005027.1 6003705 6005108 R PMID: 10984043 best DB hits: BLAST: pir:E83335; RND multidrug efflux membrane fusion protein MexE; E=1e-54 pir:T30829; hypothetical protein mexE - Pseudomonas aeruginosa; E=1e-52 pir:E83206; probable RND efflux membrane fusion protein precursor; E=2e-42 COG: PA2493; COG0845 Membrane-fusion protein; E=1e-55 PFAM: PF00364; Biotin-requiring enzyme; E=0.0006 PF00529; HlyD family secretion protein; E=4e-20; acriflavin resistance protein A complement(6003705..6005108) Rhodopirellula baltica SH 1 1793909 NP_869769.1 CDS marR NC_005027.1 6005224 6005727 R PMID: 11473263 PMID: 9068629 best DB hits: BLAST: pir:A82692; transcriptional regulator MarR family XF1354 [imported] -; E=1e-04 embl:CAB95985.1; (AL360034) MarR-family regulatory; E=2e-04 gb:AAB87745.1; (U89914) hypothetical 16.1 kDa transcriptional; E=2e-04 COG: XF1354; COG1846 Transcriptional regulators; E=1e-05 PFAM: PF01047; MarR family; E=9.8e-17; MarR family transcriptional regulator complement(6005224..6005727) Rhodopirellula baltica SH 1 1793209 NP_869770.1 CDS RB11077 NC_005027.1 6005904 6006371 R PMID: 10761919 best DB hits: BLAST: pir:D81775; conserved hypothetical protein NMA2048 [imported] -; E=3e-17 pir:F81198; conserved hypothetical protein NMB0437 [imported] -; E=4e-17 gb:AAC61685.1; (AF052517) CDG1D [Acetobacter xylinus]; E=1e-15 COG: NMB0437; COG1959 Predicted transcriptional regulator; E=4e-18 PFAM: PF02082; Uncharacterized protein family UPF00; E=1.3e-33; hypothetical protein complement(6005904..6006371) Rhodopirellula baltica SH 1 1794998 NP_869771.1 CDS RB11079 NC_005027.1 6006388 6006543 D hypothetical protein 6006388..6006543 Rhodopirellula baltica SH 1 1792146 NP_869772.1 CDS RB11080 NC_005027.1 6006413 6006592 D hypothetical protein 6006413..6006592 Rhodopirellula baltica SH 1 1791507 NP_869773.1 CDS RB11081 NC_005027.1 6006629 6007093 D hypothetical protein 6006629..6007093 Rhodopirellula baltica SH 1 1796878 NP_869774.1 CDS RB11082 NC_005027.1 6007033 6007371 R hypothetical protein complement(6007033..6007371) Rhodopirellula baltica SH 1 1793476 NP_869775.1 CDS RB11084 NC_005027.1 6007384 6010278 D PMID: 9384377 best DB hits: BLAST: pir:F69688; response regulator aspartate phosphatase rapC - Bacillus; E=0.79; response regulator aspartate phosphatase rapC 6007384..6010278 Rhodopirellula baltica SH 1 1794856 NP_869776.1 CDS RB11088 NC_005027.1 6010268 6012115 D best DB hits: BLAST: ddbj:BAA91540.1; (AK001182) unnamed protein product [Homo; E=0.027 embl:CAB98267.1; (AJ276171) ASPIC [Homo sapiens]; E=0.027 embl:CAB98268.1; (AJ276171) ASPIC [Homo sapiens] ----- embl:; E=0.027; hypothetical protein 6010268..6012115 Rhodopirellula baltica SH 1 1796893 NP_869777.1 CDS cyaA NC_005027.1 6012230 6013378 R PMID: 10952301 best DB hits: BLAST: pir:T17197; adenylate cyclase homolog - Spirulina platensis -----; E=5e-17 pir:G82244; response regulator VC1087 [imported] - Vibrio cholerae; E=1e-15 ddbj:BAA14000.1; (D89625) adenylate cyclase [Anabaena sp.]; E=6e-14 COG: VC1087_1; COG0784 CheY-like receiver domains; E=2e-16 PA2881; COG2204 AAA superfamily ATPases with N-terminal receiver; E=2e-12 VC1086_1; COG0784 CheY-like receiver domains; E=4e-11 PFAM: PF00072; Response regulator receiver doma; E=8e-19; adenylate cyclase complement(6012230..6013378) Rhodopirellula baltica SH 1 1794583 NP_869778.1 CDS RB11091 NC_005027.1 6013416 6015725 R PMID: 9045826 PMID: 10564511 best DB hits: BLAST: pir:F83324; probable two-component sensor PA2571 [imported] -; E=5e-36 pir:D82244; sensory box sensor histidine kinase VC1084 [imported] -; E=1e-35 pir:C82425; sensor histide kinase VCA0719 [imported] - Vibrio; E=2e-34 COG: PA2571; COG0642 Sensory transduction histidine kinases; E=5e-37 PFAM: PF00989; PAS domain; E=1.1e-06 PF00512; His Kinase A (phosphoacceptor) doma; E=0.001 PF02518; Histidine kinase-, DNA gyrase B-, p; E=2.9e-30; two-component sensor complement(6013416..6015725) Rhodopirellula baltica SH 1 1793741 NP_869779.1 CDS RB11095 NC_005027.1 6015744 6016727 R hypothetical protein complement(6015744..6016727) Rhodopirellula baltica SH 1 1789929 NP_869780.1 CDS RB11099 NC_005027.1 6016757 6017959 D PMID: 20365717 best DB hits: BLAST: pir:A82699; conserved hypothetical protein XF1304 [imported] -; E=4e-20 pir:T39090; probable integral membrane protein - fission yeast; E=1e-09 embl:CAB62252.1; (Y18559) hypothetical protein [Pichia farinosa]; E=2e-08 COG: XF1304; COG3163 Uncharacterized ACR; E=4e-21 BH0081; COG2966 Uncharacterized BCR; E=1e-06 MTH749; COG3163 Uncharacterized ACR; E=2e-04; hypothetical protein 6016757..6017959 Rhodopirellula baltica SH 1 1791179 NP_869781.1 CDS RB11100 NC_005027.1 6017989 6018402 R Transcriptional regulator that represses the manganese transporter MntH when manganese is present; manganese transport regulator MntR complement(6017989..6018402) Rhodopirellula baltica SH 1 1791481 NP_869782.1 CDS RB11101 NC_005027.1 6018615 6019805 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 6018615..6019805 Rhodopirellula baltica SH 1 1792698 NP_869783.1 CDS RB11104 NC_005027.1 6019790 6020155 D hypothetical protein 6019790..6020155 Rhodopirellula baltica SH 1 1795701 NP_869784.1 CDS RB11105 NC_005027.1 6020182 6021042 R best DB hits: BLAST: pir:T37061; probable secreted protein - Streptomyces coelicolor; E=8e-19 pir:T35483; hypothetical protein SC6C5.12c SC6C5.12c - Streptomyces; E=2e-15 ddbj:BAB15080.1; (AK025164) unnamed protein product [Homo; E=7e-12 COG: VC2238; COG3021 Uncharacterized BCR; E=0.001 PFAM: PF01260; AP endonuclease 1; E=0.8; hypothetical protein complement(6020182..6021042) Rhodopirellula baltica SH 1 1791955 NP_869785.1 CDS RB11107 NC_005027.1 6021425 6022102 D PMID: 8905231 best DB hits: BLAST: pir:S77018; hypothetical protein sll0788 - Synechocystis sp. (strain; E=0.12; hypothetical protein 6021425..6022102 Rhodopirellula baltica SH 1 1794608 NP_869786.1 CDS RB11109 NC_005027.1 6022268 6022597 R hypothetical protein complement(6022268..6022597) Rhodopirellula baltica SH 1 1795911 NP_869787.1 CDS RB11110 NC_005027.1 6022600 6023529 D PMID: 11759840 best DB hits: BLAST: embl:CAB93418.1; (AL357524) transposase [Streptomyces; E=0.60; transposase 6022600..6023529 Rhodopirellula baltica SH 1 1792585 NP_869788.1 CDS csaA NC_005027.1 6023806 6024144 R PMID: 10984043 best DB hits: BLAST: pir:A83243; CsaA protein PA3221 [imported] - Pseudomonas aeruginosa; E=9e-25 ddbj:BAB05504.1; (AP001513) chaperonin involved in protein; E=2e-23 swissprot:P37584; CSAA_BACSU CSAA PROTEIN ----- pir: E69607; E=7e-23 COG: PA3221; COG0073 EMAP domain; E=9e-26 PFAM: PF01588; tRNA binding domain; E=4.9e-17; CsaA protein complement(6023806..6024144) Rhodopirellula baltica SH 1 1793964 NP_869789.1 CDS RB11114 NC_005027.1 6024283 6024474 D hypothetical protein 6024283..6024474 Rhodopirellula baltica SH 1 1791078 NP_869790.1 CDS RB11115 NC_005027.1 6024483 6024632 R hypothetical protein complement(6024483..6024632) Rhodopirellula baltica SH 1 1790119 NP_869791.1 CDS aslA NC_005027.1 6024657 6026306 D PMID: 7744061 best DB hits: BLAST: pir:S69336; arylsulfatase (EC 3.1.6.1) - Pseudomonas aeruginosa; E=8e-74 swissprot:P51691; ARS_PSEAE ARYLSULFATASE (ARYL-SULFATE; E=5e-73 gb:AAF71377.1; AF262990_2 (AF262990) arylsulfatase [Klebsiella; E=3e-65 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=5e-74 PFAM: PF00884; Sulfatase; E=2.3e-45 PF00505; HMG (high mobility group) box; E=0.84 PF00884; Sulfatase; E=5.5e-54; arylsulfatase 6024657..6026306 Rhodopirellula baltica SH 1 1793186 NP_869792.1 CDS RB11118 NC_005027.1 6026407 6027564 R PMID: 11016950 best DB hits: BLAST: gb:AAG20045.1; (AE005084) chloromuconate cycloisomerase; YkfB1; E=8e-48 gb:AAF28135.1; AF153317_32 (AF153317) YcjG [Shigella dysenteriae]; E=6e-28 swissprot:P51981; YCJG_ECOLI HYPOTHETICAL 34.7 KD PROTEIN IN; E=1e-27 COG: VNG1837G; COG1441 O-succinylbenzoate synthase and related enzymes; E=8e-49 PFAM: PF02746; Mandelate racemase / muconate; E=1.3e-09 PF01188; Mandelate racemase / muconate; E=4.9e-21; chloromuconate cycloisomerase YkfB1 complement(6026407..6027564) Rhodopirellula baltica SH 1 1792319 NP_869793.1 CDS RB11119 NC_005027.1 6027561 6028775 R PMID: 1587462 PMID: 1551459 best DB hits: BLAST: swissprot:P39043; DPP6_BACSH DIPEPTIDYL-PEPTIDASE VI (DPP VI); E=2e-19 pir:A69856; polysugar degrading enzyme homolog ykfC - Bacillus; E=6e-14 ddbj:BAB06726.1; (AP001517) polysugar degrading enzyme; E=7e-14 COG: BS_ykfC; COG0791 Cell wall-associated hydrolases; E=6e-15 BH3007; COG0791 Cell wall-associated hydrolases (invasion-associated; E=6e-15 DR1325_2; COG0791 Cell wall-associated hydrolases; E=2e-12 PFAM: PF00877; NLP/P60 family; E=4.2e-24; pipeptidyl-peptidase VI complement(6027561..6028775) Rhodopirellula baltica SH 1 1793215 NP_869794.1 CDS RB11121 NC_005027.1 6028836 6029543 D hypothetical protein 6028836..6029543 Rhodopirellula baltica SH 1 1791770 NP_869795.1 CDS RB11122 NC_005027.1 6029516 6029755 R hypothetical protein complement(6029516..6029755) Rhodopirellula baltica SH 1 1794404 NP_869796.1 CDS aslA NC_005027.1 6029771 6031246 R PMID: 8020961 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=3e-31 pir:S07089; arylsulfatase (EC 3.1.6.1) - sea urchin (Lytechinus; E=9e-29 swissprot:P14000; ARS_HEMPU ARYLSULFATASE PRECURSOR (ARYL-SULFATE; E=9e-29 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=2e-27 PFAM: PF00884; Sulfatase; E=1.6e-44; N-acetylgalactosamine 6-sulfate sulfatase (GALNS) complement(6029771..6031246) Rhodopirellula baltica SH 1 1793136 NP_869797.1 CDS ids NC_005027.1 6031401 6033116 R PMID: 8325651 best DB hits: BLAST: gb:AAA37880.1; (L07921) iduronate sulfatase [Mus musculus]; E=1e-55 gb:AAA16877.1; (L13329) iduronate-2-sulfatase [Homo sapiens]; E=5e-53 gb:AAB33747.1; iduronate-2-sulfatase, IDS {EC 3.1.6.13} [human,; E=2e-52 COG: PA0031; COG3119 Arylsulfatase A and related enzymes; E=8e-36 BS_yfnI; COG1368 Phosphoglycerol transferase and related proteins,; E=4e-05 VC2600; COG3083 Predicted hydrolase of alkaline phosphatase; E=5e-05 PFAM: PF00884; Sulfatase; E=8.7e-22; iduronate-2-sulfatase complement(6031401..6033116) Rhodopirellula baltica SH 1 1790348 NP_869798.1 CDS RB11130 NC_005027.1 6033077 6033415 D hypothetical protein 6033077..6033415 Rhodopirellula baltica SH 1 1791167 NP_869799.1 CDS RB11131 NC_005027.1 6033307 6035646 D PMID: 7488183 best DB hits: BLAST: pir:JC4397; peroxinectin precursor - signal crayfish ----- embl:; E=2e-65 gb:AAC94959.1; (U68724) polysomal ribonuclease 1 [Xenopus laevis]; E=5e-65 embl:CAA43114.1; (X60703) peroxidase [Mus musculus]; E=8e-65 PFAM: PF00404; Dockerin type I repeat; E=0.11 PF00141; Peroxidase; E=7.8e-06; peroxinectin precursor 6033307..6035646 Rhodopirellula baltica SH 1 1790654 NP_869800.1 CDS RB11132 NC_005027.1 6035845 6036210 R hypothetical protein complement(6035845..6036210) Rhodopirellula baltica SH 1 1791103 NP_869801.1 CDS RB11133 NC_005027.1 6036170 6038077 D PMID: 10964925 PMID: 7657606 best DB hits: BLAST: gb:AAF47255.1; (AE003464) CG4859 gene product [Drosophila; E=3e-18 gb:AAG33131.1; AF271666_1 (AF271666) matrix metalloproteinase 1; E=3e-18 embl:CAA78248.1; (Z12604) stromelysin-3 [Mus musculus]; E=8e-16 PFAM: PF00404; Dockerin type I repeat; E=0.0079; matrix metalloproteinase 1 6036170..6038077 Rhodopirellula baltica SH 1 1790862 NP_869802.1 CDS rpoE NC_005027.1 6038191 6038868 D PMID: 11248100 PMID: 7768826 PMID: 7889934 best DB hits: BLAST: gb:AAK03873.1; (AE006215) RpoE [Pasteurella multocida]; E=7e-07 swissprot:P44790; RPOE_HAEIN RNA POLYMERASE SIGMA-E FACTOR; E=2e-06 pir:H82073; RNA polymerase sigma-E factor VC2467 [imported] - Vibrio; E=5e-06 COG: HI0628; COG1595 DNA-directed RNA polymerase specialized sigma; E=2e-07 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=0.4; RNA polymerase sigma-E factor 6038191..6038868 Rhodopirellula baltica SH 1 1793763 NP_869803.1 CDS RB11136 NC_005027.1 6038799 6041537 D PMID: 1835671 best DB hits: BLAST: pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=1e-31 embl:CAA10713.1; (AJ132604) hypothetical protein [Lactococcus; E=1e-31 pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=3e-31 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=3e-32 PFAM: PF00069; Protein kinase domain; E=9.9e-29 PF00515; TPR Domain; E=0.0026; serine/threonine protein kinase 6038799..6041537 Rhodopirellula baltica SH 1 1794178 NP_869804.1 CDS RB11137 NC_005027.1 6041524 6042972 D hypothetical protein 6041524..6042972 Rhodopirellula baltica SH 1 1795543 NP_869805.1 CDS RB11142 NC_005027.1 6043192 6044637 D best DB hits: PFAM: PF01011; PQQ enzyme repeat; E=0.34; signal peptide 6043192..6044637 Rhodopirellula baltica SH 1 1794403 NP_869806.1 CDS RB11145 NC_005027.1 6044594 6044779 R hypothetical protein complement(6044594..6044779) Rhodopirellula baltica SH 1 1792749 NP_869807.1 CDS RB11146 NC_005027.1 6044754 6045629 D PMID: 97000351 PMID: 2380986 best DB hits: BLAST: embl:CAB92202.1; (AL356592) hydrolase. [Streptomyces; E=2e-33 pir:D70881; hypothetical protein Rv2765 - Mycobacterium tuberculosis; E=3e-29 embl:CAC04055.1; (AL391406) hydrolase (dienelactone; E=9e-23 COG: Rv2765; COG0412 Dienelactone hydrolase and related enzymes; E=3e-30 PFAM: PF02277; Phosphoribosyltransferase; E=0.45 PF00561; alpha/beta hydrolase fold; E=0.6 PF01738; Dienelactone hydrolase; E=2e-34; hydrolase 6044754..6045629 Rhodopirellula baltica SH 1 1794979 NP_869808.1 CDS arsC NC_005027.1 6045769 6046419 D PMID: 10567266 PMID: 9537360 PMID: 8003493 best DB hits: BLAST: pir:F75607; arsenate reductase - Deinococcus radiodurans (strain R1); E=1e-04 swissprot:P45947; ARSC_BACSU ARSENATE REDUCTASE (ARSENICAL PUMP; E=0.001 pir:B70360; arsenate reductase - Aquifex aeolicus ----- gb:; E=0.014 COG: DRA0123; COG0394 Protein-tyrosine-phosphatase; E=1e-05; arsenate reductase 6045769..6046419 Rhodopirellula baltica SH 1 1790810 NP_869809.1 CDS RB11149 NC_005027.1 6046601 6046921 R hypothetical protein complement(6046601..6046921) Rhodopirellula baltica SH 1 1793475 NP_869810.1 CDS RB11150 NC_005027.1 6046862 6048019 D PMID: 10515912 best DB hits: BLAST: pir:D83102; xenobiotic reductase PA4356 [imported] - Pseudomonas; E=5e-92 ddbj:BAA88211.1; (AB025798) NAD(P)H-dependent 2-cyclohexen-1-one; E=1e-91 gb:AAF02539.1; AF154062_1 (AF154062) xenobiotic reductase B; E=1e-87 COG: PA4356; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme; E=4e-93 nemA; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family; E=2e-73 PA2932; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme; E=3e-70 PFAM: PF00724; NADH:flavin oxidoreductase / NAD; E=5.6e-98; xenobiotic reductase B 6046862..6048019 Rhodopirellula baltica SH 1 1791563 NP_869811.1 CDS yjgB NC_005027.1 6048095 6049105 D PMID: 87304248 PMID: 92277668 best DB hits: BLAST: pir:S76928; probable aryl alcohol dehydrogenase (EC 1.1.1.-) -; E=1e-94 pir:S56495; probable aryl alcohol dehydrogenase (EC 1.1.1.-) yjgB -; E=6e-71 swissprot:P27250; YJGB_ECOLI HYPOTHETICAL ZINC-TYPE ALCOHOL; E=6e-71 COG: slr1192; COG1064 Zn-dependent alcohol dehydrogenases; E=9e-96 PFAM: PF00899; ThiF family; E=0.48 PF02826; D-isomer specific 2-hydroxyacid; E=0.48 PF00107; Zinc-binding dehydrogenases; E=5.9e-85; zinc-type alcohol dehydrogenase 6048095..6049105 Rhodopirellula baltica SH 1 1794769 NP_869812.1 CDS czcA NC_005027.1 6049159 6052266 R PMID: 2678100 best DB hits: BLAST: pir:H82300; probable multidrug resistance protein VC0629 [imported] -; E=3e-51 pir:S76433; cation efflux system protein czcA-2 - Synechocystis sp.; E=4e-42 pir:G64595; acriflavine resistance protein - Helicobacter pylori; E=4e-41 COG: VC0629; COG0841 Cation/multidrug efflux pump; E=3e-52 PFAM: PF00873; AcrB/AcrD/AcrF family; E=1e-43; multidrug resistance protein complement(6049159..6052266) Rhodopirellula baltica SH 1 1794595 NP_869813.1 CDS RB11154 NC_005027.1 6052263 6053573 R PMID: 10984043 best DB hits: BLAST: pir:A83330; probable RND efflux membrane fusion protein precursor; E=2e-06 gb:AAG57137.1; AE005434_1 (AE005434) membrane protein; E=2e-06 ddbj:BAA15928.1; (D90845) Membrane fusion protein MtrC precursor.; E=4e-06 COG: PA2528; COG0845 Membrane-fusion protein; E=2e-07 PA3892; COG1566 Multidrug resistance efflux pump; E=1e-05 VC0628; COG0845 Membrane-fusion protein; E=4e-05 PFAM: PF00529; HlyD family secretion protein; E=4.2e-07; RND efflux membrane fusion protein precursor complement(6052263..6053573) Rhodopirellula baltica SH 1 1796098 NP_869814.1 CDS ibeB NC_005027.1 6053518 6055002 R PMID: 10225861 best DB hits: BLAST: pir:A83347; probable outer membrane protein PA2391 [imported] -; E=1e-24 pir:F83329; probable outer membrane lipoprotein precursor PA2525; E=2e-23 gb:AAD05185.1; (AF110185) unknown [Burkholderia pseudomallei]; E=4e-23 COG: PA2391; COG1538 Outer membrane protein; E=1e-25 PFAM: PF02321; Outer membrane efflux protein; E=1.3e-18; hypothetical protein complement(6053518..6055002) Rhodopirellula baltica SH 1 1794427 NP_869815.1 CDS RB11156 NC_005027.1 6055022 6056074 R PMID: 1729216 PMID: 9532806 PMID: 2253626 PMID: 9295270 best DB hits: BLAST: pir:T35404; probable squalene-hopene cyclase - Streptomyces; E=1e-04 pir:A43300; squalene-hopene cyclase (EC 5.4.99.-) - Alicyclobacillus; E=0.008 gb:AAA75452.1; (M73834) squalene-hopene-cyclase [Alicyclobacillus; E=0.008 PFAM: PF01264; Chorismate synthase; E=0.74 PF00432; Prenyltransferase and squalen; E=0.00015; squalene-hopene cyclase complement(6055022..6056074) Rhodopirellula baltica SH 1 1795283 NP_869816.1 CDS arsC NC_005027.1 6056146 6056496 R PMID: 8674982 best DB hits: BLAST: pir:C81247; arsenate reductase NMB0005 [imported] - Neisseria; E=8e-26 gb:AAG57605.1; AE005479_3 (AE005479) oxidoreductase; E=6e-25 swissprot:P76569; YFGD_ECOLI PROTEIN YFGD ----- pir: F65025; E=6e-25 COG: NMB0005; COG1393 Arsenate reductase and related proteins,; E=8e-27 yfgD; COG1393 Arsenate reductase and related proteins, glutaredoxin; E=7e-26 VC2165; COG1393 Arsenate reductase and related proteins,; E=3e-25; arsenate reductase complement(6056146..6056496) Rhodopirellula baltica SH 1 1790697 NP_869817.1 CDS RB11160 NC_005027.1 6056587 6057378 R PMID: 11337471 best DB hits: BLAST: gb:AAK04894.1; AE006313_1 (AE006313) HYPOTHETICAL PROTEIN; E=0.051 pir:T02333; hypothetical protein F13P17.29 - Arabidopsis thaliana; E=0.093 pir:T34378; hypothetical protein T25G12.7 - Caenorhabditis elegans; E=0.095 PFAM: PF01118; Semialdehyde dehydrogenase, NA; E=0.095; hypothetical protein complement(6056587..6057378) Rhodopirellula baltica SH 1 1793406 NP_869818.1 CDS RB11162 NC_005027.1 6057379 6059295 R hypothetical protein complement(6057379..6059295) Rhodopirellula baltica SH 1 1793139 NP_869819.1 CDS nrfA NC_005027.1 6059348 6060913 R PMID: 20138370 best DB hits: BLAST: pir:B81280; probable periplasmic cytochrome C Cj1357c [imported] -; E=1e-50 embl:CAB53160.1; (AJ245540) catalytic subunit of cytochrome c; E=5e-42 embl:CAB37320.1; (AJ133037) cytochrome c nitrite reductase; E=5e-37 COG: Cj1357c; COG3303 Nitrite reductase, periplasmic cytochrome c subunit; E=9e-52 PFAM: PF02335; Cytochrome c552; E=0.032; catalytic subunit of cytochrome c nitrite reductase complement(6059348..6060913) Rhodopirellula baltica SH 1 1790892 NP_869820.1 CDS nrfC NC_005027.1 6060983 6061519 R PMID: 20138370 best DB hits: BLAST: pir:C81280; probable periplasmic cytochrome C Cj1358c [imported] -; E=1e-21 embl:CAB53159.1; (AJ245540) small subunit of cytochrome c nitrite; E=1e-18 pir:A82138; cytochrome c-type protein YecK VC1951 [imported] -; E=1e-05 COG: Cj1358c; COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme; E=1e-22; small subunit of cytochrome c nitrite reductase complement(6060983..6061519) Rhodopirellula baltica SH 1 1793689 NP_869821.1 CDS moaB NC_005027.1 6061728 6062177 R PMID: 20086437 best DB hits: BLAST: pir:S76179; hypothetical protein - Synechocystis sp. (strain PCC; E=3e-04 embl:CAA76284.1; (Y16560) MPT-synthase sulfurylase [Synechococcus; E=4e-04 gb:AAF33130.1; AF196567_6 (AF196567) sulfurylase; E=0.003 COG: sll1536_2; COG0607 Rhodanese-related sulfurtransferases; E=3e-05 PFAM: PF00581; Rhodanese-like domain; E=2.8e-06; MPT-synthase sulfurylase complement(6061728..6062177) Rhodopirellula baltica SH 1 1794749 NP_869822.1 CDS RB11169 NC_005027.1 6062211 6062405 D hypothetical protein 6062211..6062405 Rhodopirellula baltica SH 1 1792817 NP_869823.1 CDS merR NC_005027.1 6062402 6063142 D PMID: 10567266 best DB hits: BLAST: pir:D75273; transcriptional regulator, MerR family - Deinococcus; E=9e-08 embl:CAB61592.1; (AL133210) DNA polymerase III beta; E=1e-05 embl:CAB88450.1; (AL353815) merR-family transcriptional; E=1e-05 COG: DR2448; COG0789 Predicted transcriptional regulators; E=8e-09; MerR family transcriptional regulator 6062402..6063142 Rhodopirellula baltica SH 1 1794044 NP_869824.1 CDS RB11173 NC_005027.1 6063194 6063586 D PMID: 9679194 best DB hits: BLAST: pir:F71051; hypothetical protein PH1109 - Pyrococcus horikoshii; E=3e-12 pir:H72254; conserved hypothetical protein - Thermotoga maritima; E=6e-12 pir:F75091; hypothetical protein PAB1624 - Pyrococcus abyssi (strain; E=8e-12 COG: PH1109; COG1832 Uncharacterized ACR; E=3e-13 AF0932; COG1042 Acyl-CoA synthetase (NDP forming); E=8e-11 Ta1005; COG1832 Uncharacterized ACR; E=2e-09 PFAM: PF02629; Uncharacterized ACR, COG1832; E=4e-13; hypothetical protein 6063194..6063586 Rhodopirellula baltica SH 1 1790573 NP_869825.1 CDS RB11174 NC_005027.1 6063637 6065046 R PMID: 10567266 best DB hits: BLAST: pir:E75584; conserved hypothetical protein - Deinococcus radiodurans; E=2e-54 ddbj:BAA86645.1; (AB033763) hypothetical protein [Staphylococcus; E=4e-45 pir:T44111; conserved hypothetical protein [imported] -; E=2e-33 COG: DRA0304_1; COG0491 Zn-dependent hydrolases, including glyoxylases; E=5e-42 MTH1096; COG0607 Rhodanese-related sulfurtransferases; E=6e-17 BS_yrkH; COG0491 Zn-dependent hydrolases, including glyoxylases; E=2e-16 PFAM: PF00753; Metallo-beta-lactamase superfamil; E=6.1e-25 PF00581; Rhodanese-like domain; E=0.0017; hypothetical protein complement(6063637..6065046) Rhodopirellula baltica SH 1 1792467 NP_869826.1 CDS RB11176 NC_005027.1 6065144 6065605 R PMID: 20365717 best DB hits: BLAST: pir:E82766; conserved hypothetical protein XF0768 [imported] -; E=2e-09 pir:C81827; hypothetical protein NMA1982 [imported] - Neisseria; E=8e-04 pir:F81048; conserved hypothetical protein NMB1727 [imported] -; E=0.001; hypothetical protein complement(6065144..6065605) Rhodopirellula baltica SH 1 1796904 NP_869827.1 CDS RB11177 NC_005027.1 6065633 6065842 D hypothetical protein 6065633..6065842 Rhodopirellula baltica SH 1 1794070 NP_869828.1 CDS uspA NC_005027.1 6065843 6066880 D PMID: 8688087 best DB hits: BLAST: swissprot:Q57951; Y531_METJA HYPOTHETICAL PROTEIN MJ0531 -----; E=4e-10 ddbj:BAB03102.1; (AP002040) gene_id:MEC18.3~unknown protein; E=2e-08 pir:A69220; conserved hypothetical protein MTH898 - Methanobacterium; E=2e-08 COG: MJ0531; COG0589 Universal stress protein UspA and related; E=4e-11 PFAM: PF00582; Universal stress protein family; E=3.9e-11; universal stress protein 6065843..6066880 Rhodopirellula baltica SH 1 1793338 NP_869829.1 CDS RB11181 NC_005027.1 6067002 6067109 D signal peptide 6067002..6067109 Rhodopirellula baltica SH 1 1792491 NP_869830.1 CDS uspA NC_005027.1 6067293 6068240 R PMID: 9371463 best DB hits: BLAST: pir:A69220; conserved hypothetical protein MTH898 - Methanobacterium; E=1e-07 gb:AAD46412.1; AF096262_1 (AF096262) ER6 protein [Lycopersicon; E=1e-05 gb:AAK04173.1; AE006246_3 (AE006246) conserved hypothetical; E=2e-05 COG: MTH898; COG0589 Universal stress protein UspA and related; E=1e-08 PFAM: PF00582; Universal stress protein family; E=4e-11; hypothetical protein complement(6067293..6068240) Rhodopirellula baltica SH 1 1794363 NP_869831.1 CDS RB11184 NC_005027.1 6068316 6068441 R signal peptide complement(6068316..6068441) Rhodopirellula baltica SH 1 1793668 NP_869832.1 CDS uspA NC_005027.1 6068431 6069342 R PMID: 8905231 best DB hits: BLAST: swissprot:P74148; YD88_SYNY3 HYPOTHETICAL 17.3 KD PROTEIN SLL1388; E=2e-05 gb:AAG20091.1; (AE005088) Vng1898c [Halobacterium sp. NRC-1]; E=5e-05 swissprot:Q57951; Y531_METJA HYPOTHETICAL PROTEIN MJ0531 -----; E=7e-04 COG: sll1388; COG0589 Universal stress protein UspA and related; E=2e-06 PFAM: PF00582; Universal stress protein family; E=0.04; universal stress protein complement(6068431..6069342) Rhodopirellula baltica SH 1 1792757 NP_869833.1 CDS sasR NC_005027.1 6069339 6070814 R best DB hits: BLAST: gb:AAG45333.1; AF273214_1 (AF273214) SasR [Myxococcus xanthus]; E=3e-83 swissprot:Q06065; ATOC_ECOLI ACETOACETATE METABOLISM REGULATORY; E=1e-81 gb:AAC28085.1; (AF100457) response regulator [Myxococcus xanthus]; E=5e-80 COG: atoC; COG2204 AAA superfamily ATPases with N-terminal receiver; E=1e-82 PFAM: PF00072; Response regulator receiver doma; E=2.7e-32 PF00158; Sigma-54 interaction domain; E=1.1e-119; NtrC-like response regulator SasR complement(6069339..6070814) Rhodopirellula baltica SH 1 1790150 NP_869834.1 CDS RB11190 NC_005027.1 6070940 6071212 R hypothetical protein complement(6070940..6071212) Rhodopirellula baltica SH 1 1795920 NP_869835.1 CDS hydH NC_005027.1 6071180 6072646 D PMID: 2666400 PMID: 11243806 best DB hits: BLAST: gb:AAG59806.1; AF305914_1 (AF305914) HydH [Klebsiella oxytoca]; E=2e-23 gb:AAG09417.1; AF180147_9 (AF180147) bZIP histidine kinase TobS; E=5e-23 embl:CAB43735.1; (Y18245) bZIP histidine kinase [Pseudomonas; E=6e-23 COG: BH1920; COG0642 Sensory transduction histidine kinases; E=2e-22 PFAM: PF00072; Response regulator receiver doma; E=1.2e-21 PF00989; PAS domain; E=1e-08 PF00785; PAC motif; E=0.053; sensor kinase of the HydH/G two-component system 6071180..6072646 Rhodopirellula baltica SH 1 1793674 NP_869836.1 CDS phnA NC_005027.1 6072695 6073078 R PMID: 2155230 best DB hits: BLAST: pir:A83631; conserved hypothetical protein PA0128 [imported] -; E=2e-34 swissprot:P16680; PHNA_ECOLI PHNA PROTEIN ----- pir: B35718; E=5e-29 pir:F82023; PhnA protein homolog NMA0283 [imported] - Neisseria; E=3e-27 COG: PA0128; COG2824 Uncharacterized Zn-ribbon-containing protein; E=2e-35 phnA; COG2824 Uncharacterized Zn-ribbon-containing protein involved; E=5e-30 NMB0037; COG2824 Uncharacterized Zn-ribbon-containing protein; E=2e-27; PhnA protein complement(6072695..6073078) Rhodopirellula baltica SH 1 1793038 NP_869837.1 CDS RB11195 NC_005027.1 6073112 6074515 D best DB hits: PFAM: PF01485; IBR domain; E=0.38; hypothetical protein 6073112..6074515 Rhodopirellula baltica SH 1 1793875 NP_869838.1 CDS RB11199 NC_005027.1 6073532 6074206 R best DB hits: BLAST: gb:AAD21990.1; (AF110998) DNA-directed DNA polymerase [snow goose; E=0.70 gb:AAD21980.1; (AF110996) DNA-directed DNA polymerase [snow goose; E=0.75 gb:AAD21985.1; (AF110997) DNA-directed DNA polymerase [snow goose; E=0.75; DNA-directed DNA polymerase complement(6073532..6074206) Rhodopirellula baltica SH 1 1792473 NP_869839.1 CDS rcp1 NC_005027.1 6074761 6075201 R PMID: 7699720 PMID: 9278513 best DB hits: BLAST: embl:CAB62661.1; (AL133422) hypothetical protein SCM1.03c.; E=8e-33 pir:D75276; response regulator - Deinococcus radiodurans (strain R1); E=1e-31 swissprot:Q55169; RCP1_SYNY3 RESPONSE REGULATOR RCP1 -----; E=1e-25 COG: DR2420; COG0784 CheY-like receiver domains; E=1e-32 slr0115; COG0745 Response regulators consisting of a CheY-like; E=2e-09 sll0039; COG0784 CheY-like receiver domains; E=6e-09 PFAM: PF00072; Response regulator receiver doma; E=6.5e-19; response regulator rcp1 complement(6074761..6075201) Rhodopirellula baltica SH 1 1795913 NP_869840.1 CDS cph1 NC_005027.1 6075155 6076903 R PMID: 10567266 best DB hits: BLAST: pir:C75276; sensory box sensor histidine kinase - Deinococcus; E=8e-45 swissprot:Q55168; PHY1_SYNY3 PHYTOCHROME-LIKE PROTEIN CPH1; E=1e-41 embl:CAB62662.1; (AL133422) two-component sensor; E=2e-41 COG: DR2419_2; COG0642 Sensory transduction histidine kinases; E=8e-46 PFAM: PF00512; His Kinase A (phosphoacceptor) doma; E=1e-12 PF02518; Histidine kinase-, DNA gyrase B-, p; E=3.5e-35; light-regulated histidine kinase 1 complement(6075155..6076903) Rhodopirellula baltica SH 1 1793407 NP_869841.1 CDS RB11204 NC_005027.1 6076852 6077364 R hypothetical protein complement(6076852..6077364) Rhodopirellula baltica SH 1 1794483 NP_869842.1 CDS merA NC_005027.1 6077380 6078903 R Enables the enzymatic reduction of mercuric ions to elemental mercury; mercuric reductase complement(6077380..6078903) Rhodopirellula baltica SH 1 1793593 NP_869843.1 CDS RB11207 NC_005027.1 6078964 6080580 R PMID: 8590279 best DB hits: BLAST: swissprot:Q55909; Y305_SYNY3 HYPOTHETICAL 22.2 KD PROTEIN SLR0305; E=2e-40 gb:AAB72174.1; (AF000657) unknown protein [Arabidopsis thaliana]; E=3e-33 gb:AAC72122.1; (AC005278) F15K9.14 [Arabidopsis thaliana]; E=1e-27 COG: slr0305; COG0398 Uncharacterized ACR; E=2e-41 aq_2066; COG1238 Uncharacterized membrane protein; E=7e-04 BS_yhjE; COG0398 Uncharacterized ACR; E=8e-04; hypothetical protein complement(6078964..6080580) Rhodopirellula baltica SH 1 1793943 NP_869844.1 CDS RB11208 NC_005027.1 6080584 6081078 D hypothetical protein 6080584..6081078 Rhodopirellula baltica SH 1 1791634 NP_869845.1 CDS RB11209 NC_005027.1 6080603 6080914 D hypothetical protein 6080603..6080914 Rhodopirellula baltica SH 1 1790347 NP_869846.1 CDS RB11210 NC_005027.1 6080653 6080955 R hypothetical protein complement(6080653..6080955) Rhodopirellula baltica SH 1 1795349 NP_869847.1 CDS yjhQ NC_005027.1 6081008 6081550 D PMID: 9175471 PMID: 9727486 best DB hits: BLAST: gb:AAK04154.1; AE006244_3 (AE006244) HYPOTHETICAL PROTEIN; E=2e-12 pir:B82297; probable acetyltransferase VC0655 [imported] - Vibrio; E=7e-12 pir:H83557; hypothetical protein PA0711 [imported] - Pseudomonas; E=2e-11 COG: VC0655; COG3153 Predicted acetyltransferase; E=7e-13 PFAM: PF00583; Acetyltransferase (GNAT) family; E=1.1e-16; acetyltransferase yjhQ 6081008..6081550 Rhodopirellula baltica SH 1 1793325 NP_869848.1 CDS RB11216 NC_005027.1 6081689 6081943 D PMID: 2106913 PMID: 3932661 PMID: 2506358 PMID: 2600971 best DB hits: BLAST: embl:CAC04216.1; (AL391515) ferredoxin [Streptomyces coelicolor; E=3e-16 embl:CAC05765.1; (AL391751) ferredoxin [Streptomyces; E=6e-16 swissprot:P13279; FER_STRGR FERREDOXIN ----- pir: S08287; E=2e-15 COG: Rv1177; COG1146 Ferredoxin 3; E=7e-16 VC1512; COG0437 Fe-S-cluster-containing hydrogenase components 1; E=5e-05 Rv0886_1; COG1146 Ferredoxin 3; E=2e-04 PFAM: PF00037; 4Fe-4S binding domain; E=1.9e-07; ferredoxin 6081689..6081943 Rhodopirellula baltica SH 1 1794971 NP_869849.1 CDS RB11217 NC_005027.1 6081958 6083022 R PMID: 11315111 best DB hits: BLAST: gb:AAB89527.1; (AE000984) dinitrogenase reductase activating; E=8e-11 pir:JC4745; ADP-ribosyl-nitrogenase hydrolase (EC 3.2.2.24) - rice; E=1e-06 pir:I39752; ADP-ribosyl-nitrogenase hydrolase (EC 3.2.2.24) -; E=1e-06 COG: AF1724; COG1397 ADP-ribosylglycohydrolase; E=7e-12; dinitrogenase reductase activating glycohydrolase (draG) complement(6081958..6083022) Rhodopirellula baltica SH 1 1795879 NP_869850.1 CDS RB11219 NC_005027.1 6083086 6083640 R PMID: 9915792 best DB hits: BLAST: swissprot:Q9ZBX9; KPTA_STRCO PROBABLE RNA 2'-PHOSPHOTRANSFERASE; E=3e-42 swissprot:Q9I778; KPTA_PSEAE PROBABLE RNA 2'-PHOSPHOTRANSFERASE; E=5e-42 pir:S56556; hypothetical 24.6K protein (iadA-mcrD intergenic region); E=1e-41 COG: PA0054; COG1859 Uncharacterized ACR; E=4e-43 PFAM: PF01885; Domain of unknown function DUF60; E=9.2e-62; RNA 2-phosphotransferase complement(6083086..6083640) Rhodopirellula baltica SH 1 1794695 NP_869851.1 CDS RB11221 NC_005027.1 6083673 6084044 R hypothetical protein complement(6083673..6084044) Rhodopirellula baltica SH 1 1790865 NP_869852.1 CDS RB11222 NC_005027.1 6084059 6084187 R hypothetical protein complement(6084059..6084187) Rhodopirellula baltica SH 1 1792553 NP_869853.1 CDS arsR NC_005027.1 6084224 6084586 D PMID: 8451191 PMID: 8506147 best DB hits: BLAST: pir:E70585; probable transcriptional regulator Rv2358 - Mycobacterium; E=4e-07 pir:B70850; probable transcriptional regulator Rv0081 - Mycobacterium; E=5e-07 gb:AAG02351.1; AF210249_10 (AF210249) metal-dependent regulatory; E=1e-06 COG: Rv2358; COG0640 Predicted transcriptional regulators; E=4e-08 PFAM: PF01022; Bacterial regulatory protein, arsR f; E=1.3e-13; metal-dependent regulatory protein 6084224..6084586 Rhodopirellula baltica SH 1 1791605 NP_869854.1 CDS RB11225 NC_005027.1 6084698 6085243 D PMID: 9733650 PMID: 8702871 best DB hits: BLAST: swissprot:P73801; YC61_SYNY3 HYPOTHETICAL 19.1 KD PROTEIN SLR1261; E=5e-25 embl:CAB62750.1; (AL133424) hypothetical protein SCF56.05; E=6e-17 swissprot:P55734; YGAP_ECOLI HYPOTHETICAL 18.6 KD PROTEIN IN; E=2e-14 COG: slr1261; COG0607 Rhodanese-related sulfurtransferases; E=5e-26 PFAM: PF00581; Rhodanese-like domain; E=2.1e-15; hypothetical protein 6084698..6085243 Rhodopirellula baltica SH 1 1791011 NP_869855.1 CDS RB11226 NC_005027.1 6085171 6086055 D best DB hits: BLAST: pir:H83213; hypothetical protein PA3457 [imported] - Pseudomonas; E=1e-08 pir:S74895; hypothetical protein slr1262 - Synechocystis sp. (strain; E=4e-08 pir:H70015; hypothetical protein yunE - Bacillus subtilis -----; E=2e-04 COG: PA3457; COG0730 Predicted permeases; E=1e-09 PFAM: PF01925; Domain of unknown function DUF81; E=3.5e-12; hypothetical protein 6085171..6086055 Rhodopirellula baltica SH 1 1790574 NP_869856.1 CDS RB11227 NC_005027.1 6086085 6087509 D PMID: 7588620 best DB hits: BLAST: ddbj:BAA86645.1; (AB033763) hypothetical protein [Staphylococcus; E=9e-94 pir:E75584; conserved hypothetical protein - Deinococcus radiodurans; E=3e-90 pir:T44111; conserved hypothetical protein [imported] -; E=2e-76 COG: DRA0304_1; COG0491 Zn-dependent hydrolases, including glyoxylases; E=3e-63 DRA0304_2; COG0607 Rhodanese-related sulfurtransferases; E=2e-22 BS_yrkH; COG0491 Zn-dependent hydrolases, including glyoxylases; E=2e-17 PFAM: PF00753; Metallo-beta-lactamase superfamil; E=7.1e-27 PF00581; Rhodanese-like domain; E=0.02; hypothetical protein 6086085..6087509 Rhodopirellula baltica SH 1 1791422 NP_869857.1 CDS RB11228 NC_005027.1 6087471 6087599 R hypothetical protein complement(6087471..6087599) Rhodopirellula baltica SH 1 1791458 NP_869858.1 CDS bfr NC_005027.1 6087671 6088150 D PMID: 2276500 PMID: 1904771 PMID: 8695634 PMID: 8526846 PMID: 7664064 PMID: 7559480 best DB hits: BLAST: swissprot:Q59738; BFR_RHOCA BACTERIOFERRITIN (BFR) ----- embl:; E=9e-22 swissprot:P49944; BFR_BRUME BACTERIOFERRITIN (BFR) ----- pir:; E=4e-21 pir:H82810; bacterioferritin XF0395 [imported] - Xylella fastidiosa; E=7e-19 COG: XF0395; COG2193 Bacterioferritin (cytochrome b1); E=7e-20 BS_yhjR; COG1633 Uncharacterized ACR; E=0.004 AF0832; COG1592 Rubrerythrin; E=0.009 PFAM: PF01334; Bacterioferritin; E=9.1e-39; bacterioferritin 6087671..6088150 Rhodopirellula baltica SH 1 1790770 NP_869859.1 CDS RB11231 NC_005027.1 6088214 6089386 D best DB hits: BLAST: gb:AAB90342.1; (AE001041) A. fulgidus predicted coding region; E=0.001 COG: AF0913; COG1416 Uncharacterized ACR; E=1e-04 PFAM: PF01406; tRNA synthetases class I (C); E=0.52; hypothetical protein 6088214..6089386 Rhodopirellula baltica SH 1 1790781 NP_869860.1 CDS RB11233 NC_005027.1 6089453 6090340 R hypothetical protein complement(6089453..6090340) Rhodopirellula baltica SH 1 1793411 NP_869861.1 CDS RB11235 NC_005027.1 6090398 6090991 D hypothetical protein 6090398..6090991 Rhodopirellula baltica SH 1 1791217 NP_869862.1 CDS RB11236 NC_005027.1 6091005 6091187 D hypothetical protein 6091005..6091187 Rhodopirellula baltica SH 1 1794948 NP_869863.1 CDS czcB NC_005027.1 6091324 6092547 D PMID: 2249654 PMID: 2184029 best DB hits: BLAST: gb:AAG09628.1; (AY007258) CztB [Pseudomonas fluorescens]; E=6e-17 pir:F83330; RND divalent metal cation efflux membrane fusion protein; E=2e-15 embl:CAB56470.1; (Y14018) czrB protein [Pseudomonas aeruginosa]; E=2e-14 COG: PA2521; COG0845 Membrane-fusion protein; E=1e-16 PFAM: PF00364; Biotin-requiring enzyme; E=4.2e-05 PF00529; HlyD family secretion protein; E=0.37; cobalt-zinc-cadmium resistance protein 6091324..6092547 Rhodopirellula baltica SH 1 1793157 NP_869864.1 CDS czcA NC_005027.1 6092544 6095705 D PMID: 8829543 best DB hits: BLAST: swissprot:P94177; CZCA_ALCSP CATION EFFLUX SYSTEM PROTEIN CZCA; E=0.0 pir:A33830; cation efflux system membrane protein czcA - Alcaligenes; E=0.0 swissprot:P13511; CZCA_ALCEU COBALT-ZINC-CADMIUM RESISTANCE PROTEIN; E=0.0 COG: PA2520; COG0841 Cation/multidrug efflux pump; E=0.0 PFAM: PF00804; Syntaxin; E=0.39 PF00873; AcrB/AcrD/AcrF family; E=0; cation efflux system protein CZCA 6092544..6095705 Rhodopirellula baltica SH 1 1793231 NP_869865.1 CDS sigE NC_005027.1 6095778 6096383 D PMID: 3052291 PMID: 8052622 best DB hits: BLAST: embl:CAC01348.1; (AL390975) ECF-subfamily sigma factor; E=9e-08 gb:AAC45221.1; (U87307) extracytoplasmic function alternative; E=1e-04 embl:CAC17654.1; (AL450450) ECF sigma factor; E=1e-04 COG: Rv1221; COG1595 DNA-directed RNA polymerase specialized sigma; E=6e-05 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=3.3e-10; extracytoplasmic function alternative sigma factor 6095778..6096383 Rhodopirellula baltica SH 1 1794208 NP_869866.1 CDS RB11244 NC_005027.1 6096365 6098935 D PMID: 1956325 PMID: 1835513 PMID: 3291115 best DB hits: BLAST: ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=1e-44 pir:T36501; probable serinethreonine protein kinase - Streptomyces; E=7e-43 pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=3e-42 COG: BH2504_1; COG0515 Serine/threonine protein kinases; E=1e-45 PFAM: PF00069; Protein kinase domain; E=2.2e-50; serine/threonine protein kinase 6096365..6098935 Rhodopirellula baltica SH 1 1793518 NP_869867.1 CDS RB11245 NC_005027.1 6098965 6099126 R hypothetical protein complement(6098965..6099126) Rhodopirellula baltica SH 1 1796829 NP_869868.1 CDS RB11247 NC_005027.1 6099130 6100293 R PMID: 2229036 PMID: 3762694 PMID: 1542576 best DB hits: BLAST: pir:B83548; hypothetical protein PA0787 [imported] - Pseudomonas; E=2e-96 gb:AAG45955.1; AF282921_1 (AF282921) RecF protein; E=7e-35 gb:AAB90237.1; (AE001034) A. fulgidus predicted coding region; E=0.005 PFAM: PF00005; ABC transporter; E=0.0014 PF00470; RecF protein; E=0.34 PF02463; SMC domain N terminal domain; E=0.11; RecF protein complement(6099130..6100293) Rhodopirellula baltica SH 1 1794798 NP_869869.1 CDS RB11248 NC_005027.1 6100290 6101252 R best DB hits: BLAST: pir:T37506; protein-S-isoprenylcysteine O-methyltransferase (EC; E=0.095; protein-S-isoprenylcysteine methyltransferase complement(6100290..6101252) Rhodopirellula baltica SH 1 1790693 NP_869870.1 CDS RB11249 NC_005027.1 6101311 6102588 R best DB hits: BLAST: swissprot:P29679; TESA_ECOLI ACYL-COA THIOESTERASE I PRECURSOR; E=0.28 gb:AAB40248.1; (U82664) acyl-coA thioesterase I precursor; E=0.28 gb:AAG54851.1; AE005230_11 (AE005230) acyl-CoA thioesterase I; E=0.32; acyl-CoA thioesterase complement(6101311..6102588) Rhodopirellula baltica SH 1 1792375 NP_869871.1 CDS cypX NC_005027.1 6102783 6104327 D PMID: 20411542 best DB hits: BLAST: pir:T06288; probable cytochrome P450 T9E8.50 - Arabidopsis thaliana; E=5e-14 ddbj:BAA31438.1; (AB010393) ALK6 [Yarrowia lipolytica]; E=3e-13 pir:C81286; probable cytochrome P450 Cj1411c [imported] -; E=5e-13 COG: Cj1411c; COG2124 Cytochrome P450; E=4e-14 PFAM: PF00067; Cytochrome P450; E=1e-20; cytochrome P450 T9E850 6102783..6104327 Rhodopirellula baltica SH 1 1793430 NP_869872.1 CDS pgsA NC_005027.1 6104491 6105171 R PMID: 8576035 PMID: 3031032 best DB hits: BLAST: prf:2206391A; phosphatidylglycerophosphate synthase [Rhodobacter; E=2e-04 gb:AAG44472.1; AF241784_1 (AF241784) CAPTase-iso [Homo sapiens]; E=7e-04 swissprot:Q50611; PGSA_MYCTU ; E=0.004 COG: Rv1822; COG0558 Phosphatidylglycerophosphate synthase; E=4e-04 PFAM: PF01066; CDP-alcohol phosphatidyltrans; E=0.00012; phosphatidylglycerophosphate synthase complement(6104491..6105171) Rhodopirellula baltica SH 1 1793233 NP_869873.1 CDS RB11255 NC_005027.1 6105168 6106130 R PMID: 2995359 PMID: 8557688 best DB hits: BLAST: gb:AAG56370.1; AE005365_4 (AE005365) phosphatidate; E=4e-24 swissprot:P76091; YNBB_ECOLI HYPOTHETICAL 33.1 KD PROTEIN IN; E=3e-22 pir:H82138; probable phosphatidate cytidylyltransferase VC1936; E=5e-22 COG: ynbB; COG0575 CDP-diglyceride synthetase; E=3e-23 PFAM: PF01148; Phosphatidate cytidylyltransfe; E=4.9e-16; phosphatidate cytidylyltransferase complement(6105168..6106130) Rhodopirellula baltica SH 1 1792124 NP_869874.1 CDS RB11258 NC_005027.1 6106127 6106840 R best DB hits: BLAST: pir:C82165; conserved hypothetical protein VC1723 [imported] -; E=6e-12 swissprot:P71772; YE91_MYCTU HYPOTHETICAL 26.6 KDA PROTEIN RV1491C; E=8e-07 pir:B71448; hypothetical protein - Arabidopsis thaliana -----; E=1e-04 COG: VC1723; COG0398 Uncharacterized ACR; E=5e-13; hypothetical protein complement(6106127..6106840) Rhodopirellula baltica SH 1 1792557 NP_869875.1 CDS dksA NC_005027.1 6106837 6107202 R PMID: 2180916 best DB hits: BLAST: pir:E81429; dksA-like protein Cj0125c [imported] - Campylobacter; E=1e-09 pir:D71366; probable dnaK suppressor - syphilis spirochete -----; E=2e-06 pir:T35472; hypothetical protein SC6C5.01 SC6C5.01 - Streptomyces; E=8e-06 COG: Cj0125c; COG1734 DnaK suppressor protein; E=2e-10 PFAM: PF01258; Prokaryotic dksA/traR C4-type zi; E=3.2e-10; dnaK (dksA-like) supressor protein complement(6106837..6107202) Rhodopirellula baltica SH 1 1791029 NP_869876.1 CDS RB11262 NC_005027.1 6107307 6108302 R best DB hits: BLAST: pir:D83268; conserved hypothetical protein PA3023 [imported] -; E=6e-20 swissprot:P76407; YEGS_ECOLI HYPOTHETICAL 32.0 KDA PROTEIN IN; E=9e-14 gb:AAG57146.1; AE005435_4 (AE005435) orf, hypothetical protein; E=3e-13 COG: PA3023; COG1597 Uncharacterized ACR; E=6e-21 PFAM: PF00781; Diacylglycerol kinase catalyti; E=0.0004; hypothetical protein complement(6107307..6108302) Rhodopirellula baltica SH 1 1792696 NP_869877.1 CDS cpdA NC_005027.1 6108475 6109389 D best DB hits: BLAST: pir:C69097; 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17); E=8e-16 pir:A70360; 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17); E=7e-13 pir:F69104; 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17); E=2e-11 COG: MTH1722; COG1409 Predicted phosphohydrolases; E=8e-17 APE0113; COG0420 DNA repair exonuclease; E=0.001 HI0399; COG1409 Predicted phosphohydrolases; E=0.001 PFAM: PF02549; DNA repair exonuclease; E=4.2e-06; 3',5'-cyclic-nucleotide phosphodiesterase 6108475..6109389 Rhodopirellula baltica SH 1 1793214 NP_869878.1 CDS RB11268 NC_005027.1 6109475 6109768 R hypothetical protein complement(6109475..6109768) Rhodopirellula baltica SH 1 1795607 NP_869879.1 CDS RB11269 NC_005027.1 6109738 6110583 D PMID: 10984043 best DB hits: BLAST: pir:A83334; hypothetical protein PA2481 [imported] - Pseudomonas; E=4e-27 pir:E83075; probable cytochrome c PA4571 [imported] - Pseudomonas; E=8e-27 pir:D81360; cytochrome C Cj0874c [imported] - Campylobacter jejuni; E=8e-23 COG: PA2481; COG3258 Cytochrome c; E=4e-28; cytochrome c 6109738..6110583 Rhodopirellula baltica SH 1 1795416 NP_869880.1 CDS RB11271 NC_005027.1 6110602 6110868 D hypothetical protein 6110602..6110868 Rhodopirellula baltica SH 1 1793363 NP_869881.1 CDS bcr NC_005027.1 6110901 6112127 D PMID: 8486276 best DB hits: BLAST: gb:AAD03845.1; (AF079317) unknown [Sphingomonas aromaticivorans]; E=2e-33 pir:T50593; probable membrane transport protein [imported] -; E=4e-24 pir:H83198; probable MFS transporter PA3573 [imported] - Pseudomonas; E=1e-20 COG: PA3573; COG0477 Permeases of the major facilitator superfamily; E=1e-21 PFAM: PF00083; Sugar (and other) transporter; E=1.9e-13; bicyclomycin resistance protein 6110901..6112127 Rhodopirellula baltica SH 1 1795002 NP_869882.1 CDS RB11276 NC_005027.1 6112296 6115085 D signal peptide 6112296..6115085 Rhodopirellula baltica SH 1 1795673 NP_869883.1 CDS RB11279 NC_005027.1 6115040 6116548 D best DB hits: BLAST: gb:AAK03766.1; (AE006204) unknown [Pasteurella multocida]; E=0.63; related to sulfatase 6115040..6116548 Rhodopirellula baltica SH 1 1790182 NP_869884.1 CDS RB11280 NC_005027.1 6116562 6116975 R hypothetical protein complement(6116562..6116975) Rhodopirellula baltica SH 1 1792743 NP_869885.1 CDS RB11282 NC_005027.1 6116951 6117670 D signal peptide 6116951..6117670 Rhodopirellula baltica SH 1 1793608 NP_869886.1 CDS RB11283 NC_005027.1 6117649 6117804 R hypothetical protein complement(6117649..6117804) Rhodopirellula baltica SH 1 1795914 NP_869887.1 CDS RB11284 NC_005027.1 6117762 6117917 D hypothetical protein 6117762..6117917 Rhodopirellula baltica SH 1 1793237 NP_869888.1 CDS tspO NC_005027.1 6117961 6118356 D PMID: 11097914 best DB hits: BLAST: pir:G69987; hypothetical protein ytaB - Bacillus subtilis -----; E=3e-08 gb:AAF01195.1; AF179401_4 (AF179401) TspO [Sinorhizobium meliloti]; E=2e-07 pir:A57438; tryptophan-rich sensory protein [similarity] -; E=4e-04 PFAM: PF01061; ABC-2 type transporter; E=0.09; TspO/MBR family protein 6117961..6118356 Rhodopirellula baltica SH 1 1795660 NP_869889.1 CDS RB11287 NC_005027.1 6118405 6118632 D hypothetical protein 6118405..6118632 Rhodopirellula baltica SH 1 1795508 NP_869890.1 CDS RB11288 NC_005027.1 6118710 6119525 D PMID: 11466286 best DB hits: BLAST: pir:F75526; hypothetical protein - Deinococcus radiodurans (strain; E=0.012; hypothetical protein 6118710..6119525 Rhodopirellula baltica SH 1 1795925 NP_869891.1 CDS RB11289 NC_005027.1 6119539 6120036 D hypothetical protein 6119539..6120036 Rhodopirellula baltica SH 1 1795575 NP_869892.1 CDS RB11291 NC_005027.1 6120208 6120648 D best DB hits: BLAST: embl:CAB92104.1; (AL356334) hypothetical protein SCD69.03; E=0.001 pir:D70567; hypothetical protein Rv3471c - Mycobacterium; E=0.006 pir:A64502; hypothetical protein MJ1618 - Methanococcus jannaschii; E=0.052 COG: Rv3471c; COG0662 Mannose-6-phosphate isomerase; E=6e-04; mannose-6-phosphate isomerase 6120208..6120648 Rhodopirellula baltica SH 1 1791961 NP_869893.1 CDS RB11292 NC_005027.1 6120684 6120881 R hypothetical protein complement(6120684..6120881) Rhodopirellula baltica SH 1 1794323 NP_869894.1 CDS RB11293 NC_005027.1 6120889 6121182 R hypothetical protein complement(6120889..6121182) Rhodopirellula baltica SH 1 1794866 NP_869895.1 CDS RB11294 NC_005027.1 6121139 6124990 D PMID: 9282737 PMID: 1971619 best DB hits: BLAST: pir:C75333; general secretion pathway protein E - Deinococcus; E=2e-04 pir:A72329; general secretion pathway protein E - Thermotoga; E=0.002 swissprot:P31599; NFRB_ECOLI BACTERIOPHAGE N4 ADSORPTION PROTEIN B; E=0.014 COG: DR1964; COG2804 Predicted ATPases involved in pili biogenesis, PilB; E=2e-05; general secretion pathway protein E 6121139..6124990 Rhodopirellula baltica SH 1 1796965 NP_869896.1 CDS RB11296 NC_005027.1 6124961 6125170 R hypothetical protein complement(6124961..6125170) Rhodopirellula baltica SH 1 1794657 NP_869897.1 CDS RB11298 NC_005027.1 6125177 6125308 D hypothetical protein 6125177..6125308 Rhodopirellula baltica SH 1 1793012 NP_869898.1 CDS RB11299 NC_005027.1 6125286 6125429 R hypothetical protein complement(6125286..6125429) Rhodopirellula baltica SH 1 1793162 NP_869899.1 CDS RB11300 NC_005027.1 6125444 6125599 R hypothetical protein complement(6125444..6125599) Rhodopirellula baltica SH 1 1793098 NP_869900.1 CDS RB11301 NC_005027.1 6125647 6127269 D signal peptide 6125647..6127269 Rhodopirellula baltica SH 1 1794207 NP_869901.1 CDS RB11303 NC_005027.1 6127205 6128599 R best DB hits: BLAST: gb:AAG18661.1; (AE004971) Vng0021h [Halobacterium sp. NRC-1]; E=4e-23 gb:AAG18694.1; (AE004974) Vng0056h [Halobacterium sp. NRC-1]; E=4e-21 pir:T44318; transposase homolog [imported] - Vibrio cholerae -----; E=3e-16; transposase-like protein complement(6127205..6128599) Rhodopirellula baltica SH 1 1792622 NP_869902.1 CDS RB11305 NC_005027.1 6128704 6129624 D best DB hits: PFAM: PF02424; ApbE family; E=0.71; signal peptide 6128704..6129624 Rhodopirellula baltica SH 1 1792268 NP_869903.1 CDS RB11307 NC_005027.1 6129599 6129709 D hypothetical protein 6129599..6129709 Rhodopirellula baltica SH 1 1793931 NP_869904.1 CDS RB11308 NC_005027.1 6129721 6129960 R hypothetical protein complement(6129721..6129960) Rhodopirellula baltica SH 1 1793154 NP_869905.1 CDS RB11309 NC_005027.1 6130032 6130220 D hypothetical protein 6130032..6130220 Rhodopirellula baltica SH 1 1792829 NP_869906.1 CDS RB11310 NC_005027.1 6130268 6130516 D hypothetical protein 6130268..6130516 Rhodopirellula baltica SH 1 1794966 NP_869907.1 CDS RB11311 NC_005027.1 6130297 6130482 D hypothetical protein 6130297..6130482 Rhodopirellula baltica SH 1 1792250 NP_869908.1 CDS RB11312 NC_005027.1 6130479 6131645 D hypothetical protein 6130479..6131645 Rhodopirellula baltica SH 1 1790359 NP_869909.1 CDS lexA NC_005027.1 6131652 6132548 R PMID: 8076591 best DB hits: BLAST: embl:CAB54047.1; (AJ245436) hypothetical protein, 21.8 kD; E=4e-27 swissprot:P50361; Y4HQ_RHISN HYPOTHETICAL 21.7 KD PROTEIN Y4HQ; E=5e-25 pir:S19103; hypothetical protein 3 - Agrobacterium rhizogenes; E=1e-19 COG: BS_lexA; COG1974 SOS-response transcriptional repressors; E=5e-06 PFAM: PF00325; Bacterial regulatory proteins,; E=4.2e-05 PF01325; Iron dependent repressor, N-te; E=0.00013 PF01047; MarR family; E=0.00032; lexA repressor complement(6131652..6132548) Rhodopirellula baltica SH 1 1794848 NP_869910.1 CDS RB11314 NC_005027.1 6132840 6133748 R hypothetical protein complement(6132840..6133748) Rhodopirellula baltica SH 1 1793282 NP_869911.1 CDS RB11316 NC_005027.1 6133854 6134246 D hypothetical protein 6133854..6134246 Rhodopirellula baltica SH 1 1790718 NP_869912.1 CDS RB11318 NC_005027.1 6134344 6134589 R hypothetical protein complement(6134344..6134589) Rhodopirellula baltica SH 1 1790061 NP_869913.1 CDS RB11319 NC_005027.1 6134657 6136312 R best DB hits: BLAST: gb:AAC53043.1; (U86137) telomerase-1 [Mus musculus]; E=2e-08 gb:AAB51690.1; (U89282) telomerase component 1 [Rattus; E=3e-06 gb:AAC51107.1; (U86136) telomerase-associated protein TP-1 [Homo; E=6e-06; telomerase-1 complement(6134657..6136312) Rhodopirellula baltica SH 1 1793615 NP_869914.1 CDS RB11320 NC_005027.1 6136339 6138507 R hypothetical protein complement(6136339..6138507) Rhodopirellula baltica SH 1 1791342 NP_869915.1 CDS afsR-g NC_005027.1 6138517 6141957 R PMID: 10517581 best DB hits: BLAST: ddbj:BAA83790.1; (AB025225) AfsR-g [Streptomyces griseus]; E=2e-05 embl:CAB72409.1; (AL138978) AfsR-like regulator; E=9e-04 swissprot:P25941; AFSR_STRCO REGULATORY PROTEIN AFSR -----; E=0.003 PFAM: PF00293; MutT-like domain; E=2.9e-06 PF00515; TPR Domain; E=0.28; regulatory protein afsR complement(6138517..6141957) Rhodopirellula baltica SH 1 1792909 NP_869916.1 CDS RB11323 NC_005027.1 6142000 6142431 R hypothetical protein complement(6142000..6142431) Rhodopirellula baltica SH 1 1790487 NP_869917.1 CDS RB11325 NC_005027.1 6142392 6142535 R hypothetical protein complement(6142392..6142535) Rhodopirellula baltica SH 1 1795476 NP_869918.1 CDS iuvY NC_005027.1 6142717 6143733 D PMID: 10588699 PMID: 9556617 best DB hits: BLAST: swissprot:P05827; ILVY_ECOLI TRANSCRIPTIONAL ACTIVATOR PROTEIN; E=1e-05 pir:S30671; ilvC activator - Escherichia coli; E=1e-05 gb:AAG58968.1; AE005608_9 (AE005608) positive regulator for ilvC; E=1e-05 COG: ilvY; COG0583 Transcriptional regulator; E=9e-07 PFAM: PF00126; Bacterial regulatory helix-turn-heli; E=6.1e-15; transcriptional activator protein ilvY 6142717..6143733 Rhodopirellula baltica SH 1 1795560 NP_869919.1 CDS RB11329 NC_005027.1 6143730 6144254 D hypothetical protein 6143730..6144254 Rhodopirellula baltica SH 1 1790121 NP_869920.1 CDS RB11331 NC_005027.1 6144227 6146656 D PMID: 2046548 PMID: 8412700 best DB hits: BLAST: pir:T35377; probable membrane protein - Streptomyces coelicolor; E=4e-08 pir:S76244; hypothetical protein - Synechocystis sp. (strain PCC; E=6e-06 pir:S76018; hypothetical protein - Synechocystis sp. (strain PCC; E=3e-04 COG: sll0261; COG1226 Kef-type K+ transport systems, predicted; E=6e-07 DR2336; COG1226 Kef-type K+ transport systems, predicted NAD-binding; E=4e-04 MJ0138.1; COG1226 Kef-type K+ transport systems, predicted; E=7e-04 PFAM: PF01408; Oxidoreductase, NAD-bind; E=0.0037 PF02254; KTN NAD-binding domain; E=3.8e-13; glutathione-regulated potassium-efflux system protein KefB 6144227..6146656 Rhodopirellula baltica SH 1 1792285 NP_869921.1 CDS RB11334 NC_005027.1 6146708 6152407 D PMID: 3291115 best DB hits: BLAST: gb:AAF73695.1; (AE002226) serinethreonine-protein kinase; E=1e-35 pir:G71532; probable threoninetyrosine-specific protein kinase (EC; E=8e-34 pir:C72120; st protein kinase - Chlamydophila pneumoniae (strain; E=5e-33 COG: CT301_1; COG0515 Serine/threonine protein kinases; E=8e-35 PFAM: PF00069; Protein kinase domain; E=2.6e-37 PF00400; WD domain, G-beta repeat; E=0.013 PF00515; TPR Domain; E=0.0067; serine/threonine-protein kinase 6146708..6152407 Rhodopirellula baltica SH 1 1796844 NP_869922.1 CDS RB11336 NC_005027.1 6152404 6152517 D hypothetical protein 6152404..6152517 Rhodopirellula baltica SH 1 1791775 NP_869923.1 CDS RB11337 NC_005027.1 6152514 6153383 D PMID: 8041625 best DB hits: BLAST: pir:S35005; probable transposase - Acetobacter xylinus insertion; E=9e-21 pir:S35004; probable transposase - Acetobacter xylinus insertion; E=4e-20 gb:AAD47597.1; AF144038_1 (AF144038) transposase; E=2e-18 COG: sll1716; COG3293 Predicted transposase; E=2e-13 PFAM: PF01511; Transposase; E=1.2e-09 PF01675; Transposase; E=2.5e-05; transposase 6152514..6153383 Rhodopirellula baltica SH 1 1794212 NP_869924.1 CDS RB11339 NC_005027.1 6153422 6153820 R hypothetical protein complement(6153422..6153820) Rhodopirellula baltica SH 1 1791100 NP_869925.1 CDS RB11340 NC_005027.1 6153930 6154139 D hypothetical protein 6153930..6154139 Rhodopirellula baltica SH 1 1792460 NP_869926.1 CDS RB11341 NC_005027.1 6154153 6154359 R hypothetical protein complement(6154153..6154359) Rhodopirellula baltica SH 1 1792934 NP_869927.1 CDS RB11342 NC_005027.1 6154311 6154655 R hypothetical protein complement(6154311..6154655) Rhodopirellula baltica SH 1 1794680 NP_869928.1 CDS RB11343 NC_005027.1 6154696 6154977 D hypothetical protein 6154696..6154977 Rhodopirellula baltica SH 1 1794425 NP_869929.1 CDS RB11345 NC_005027.1 6155013 6155240 R hypothetical protein complement(6155013..6155240) Rhodopirellula baltica SH 1 1790643 NP_869930.1 CDS RB11348 NC_005027.1 6155237 6155692 R hypothetical protein complement(6155237..6155692) Rhodopirellula baltica SH 1 1796820 NP_869931.1 CDS RB11352 NC_005027.1 6155689 6156546 R best DB hits: BLAST: pir:A81289; hypothetical protein Cj1433c [imported] - Campylobacter; E=6e-07 pir:E71020; hypothetical protein PH1458 - Pyrococcus horikoshii; E=0.017 gb:AAD45550.1; U70376_15 (U70376) SpcY [Streptomyces netropsis]; E=0.061 COG: PH1458; COG1964 Predicted Fe-S oxidoreductases; E=0.002; hypothetical protein complement(6155689..6156546) Rhodopirellula baltica SH 1 1792741 NP_869932.1 CDS RB11354 NC_005027.1 6156470 6157495 R hypothetical protein complement(6156470..6157495) Rhodopirellula baltica SH 1 1792669 NP_869933.1 CDS RB11356 NC_005027.1 6157486 6158199 R PMID: 7515051 best DB hits: BLAST: gb:AAA39802.1; (L30104) N-acetylgalactosaminyltransferase [Mus; E=2e-06 PFAM: PF00535; Glycosyl transferase; E=1.6e-06; N-acetylgalactosaminyltransferase complement(6157486..6158199) Rhodopirellula baltica SH 1 1793008 NP_869934.1 CDS RB11360 NC_005027.1 6158192 6158557 R hypothetical protein complement(6158192..6158557) Rhodopirellula baltica SH 1 1790527 NP_869935.1 CDS RB11363 NC_005027.1 6158661 6159398 R hypothetical protein complement(6158661..6159398) Rhodopirellula baltica SH 1 1792058 NP_869936.1 CDS RB11366 NC_005027.1 6159395 6159943 R PMID: 3119860 best DB hits: BLAST: pir:F70829; probable transcriptional regulator Rv0474 - Mycobacterium; E=0.015 embl:CAC04034.1; (AL391406) DNA-binding protein; E=0.10 pir:S25724; hypothetical protein 1 (phbC 5' region) - Rhodococcus; E=0.12 COG: Rv0474; COG1396 Predicted transcriptional regulators; E=0.001 PFAM: PF01381; Helix-turn-helix; E=2.9e-13; transcriptional regulator complement(6159395..6159943) Rhodopirellula baltica SH 1 1790621 NP_869937.1 CDS RB11367 NC_005027.1 6160080 6163904 R best DB hits: PFAM: PF00515; TPR Domain; E=0.017; hypothetical protein complement(6160080..6163904) Rhodopirellula baltica SH 1 1791143 NP_869938.1 CDS RB11370 NC_005027.1 6163939 6164295 R best DB hits: BLAST: embl:CAC04034.1; (AL391406) DNA-binding protein; E=0.048 pir:S25724; hypothetical protein 1 (phbC 5' region) - Rhodococcus; E=0.048 ddbj:BAB07268.1; (AP001519) immunity repressor protein; E=0.057 COG: BH3549; COG1396 Predicted transcriptional regulators; E=0.006 PFAM: PF01381; Helix-turn-helix; E=3.5e-10; hypothetical protein complement(6163939..6164295) Rhodopirellula baltica SH 1 1790799 NP_869939.1 CDS hsdR NC_005027.1 6164292 6167747 R PMID: 8921897 best DB hits: BLAST: gb:AAK03625.1; (AE006191) HsdR [Pasteurella multocida]; E=9e-56 pir:C81302; probable type I site-specific deoxyribonuclease (EC; E=1e-54 pir:JC5216; type I site-specific deoxyribonuclease (EC 3.1.21.3) Hsd; E=1e-52 COG: Cj1549c; COG0610 Restriction enzymes type I helicase subunits and; E=1e-55 PFAM: PF01911; Ribosomal LX protein; E=0.84; hypothetical protein complement(6164292..6167747) Rhodopirellula baltica SH 1 1795251 NP_869940.1 CDS RB11373 NC_005027.1 6167856 6168689 R hypothetical protein complement(6167856..6168689) Rhodopirellula baltica SH 1 1792734 NP_869941.1 CDS yma NC_005027.1 6168686 6169522 R best DB hits: BLAST: gb:AAB91575.2; (AF242881) yma [Agrobacterium tumefaciens]; E=2e-32; hypothetical protein complement(6168686..6169522) Rhodopirellula baltica SH 1 1796795 NP_869942.1 CDS hsdS NC_005027.1 6169519 6170754 R PMID: 2585490 PMID: 9837717 best DB hits: BLAST: gb:AAC37110.1; (L77118) M. jannaschii predicted coding region; E=3e-12 swissprot:Q58615; YC18_METJA HYPOTHETICAL PROTEIN MJ1218 -----; E=3e-12 embl:CAA35604.1; (X17591) HsdS polypeptide, part of CfrA family; E=1e-06 COG: MJECL41; COG0732 Restriction endonuclease S subunits; E=3e-13 PFAM: PF01420; Type I restriction modification; E=0.00019; polypeptide HsdS complement(6169519..6170754) Rhodopirellula baltica SH 1 1795616 NP_869943.1 CDS RB11379 NC_005027.1 6170751 6172913 R PMID: 8921897 best DB hits: BLAST: pir:D82522; type I restriction-modification system DNA methylase; E=4e-58 gb:AAC37111.1; (L77118) type I restriction enyzme ECOR1243 I M; E=4e-56 embl:CAA68057.1; (X99719) Sty SBLI [Salmonella enterica]; E=1e-54 COG: XF2742; COG0286 Type I restriction-modification system; E=4e-59 PFAM: PF02506; Type I restriction modification s; E=1e-34 PF02384; N-6 DNA Methylase; E=4.3e-10; type I restriction-modification system DNA methylase complement(6170751..6172913) Rhodopirellula baltica SH 1 1793856 NP_869944.1 CDS RB11381 NC_005027.1 6173105 6174142 D hypothetical protein 6173105..6174142 Rhodopirellula baltica SH 1 1792953 NP_869945.1 CDS RB11383 NC_005027.1 6174244 6175965 D best DB hits: PFAM: PF00140; Sigma-70 factor; E=0.0029; hypothetical protein 6174244..6175965 Rhodopirellula baltica SH 1 1794190 NP_869946.1 CDS RB11386 NC_005027.1 6175940 6176116 R hypothetical protein complement(6175940..6176116) Rhodopirellula baltica SH 1 1793466 NP_869947.1 CDS RB11387 NC_005027.1 6176099 6176473 D PMID: 10567266 best DB hits: BLAST: pir:D75324; hypothetical protein - Deinococcus radiodurans (strain; E=6e-15 pir:C83546; hypothetical protein PA0806 [imported] - Pseudomonas; E=2e-11 embl:CAB92195.1; (AL356592) membrane protein.; E=0.005; hypothetical protein 6176099..6176473 Rhodopirellula baltica SH 1 1791933 NP_869948.1 CDS RB11388 NC_005027.1 6176533 6176658 D hypothetical protein 6176533..6176658 Rhodopirellula baltica SH 1 1793571 NP_869949.1 CDS RB11389 NC_005027.1 6176641 6176823 R hypothetical protein complement(6176641..6176823) Rhodopirellula baltica SH 1 1794084 NP_869950.1 CDS RB11390 NC_005027.1 6176780 6176995 D hypothetical protein 6176780..6176995 Rhodopirellula baltica SH 1 1790937 NP_869951.1 CDS RB11391 NC_005027.1 6177102 6177239 D hypothetical protein 6177102..6177239 Rhodopirellula baltica SH 1 1796788 NP_869952.1 CDS RB11392 NC_005027.1 6177208 6177654 D hypothetical protein 6177208..6177654 Rhodopirellula baltica SH 1 1795634 NP_869953.1 CDS RB11393 NC_005027.1 6177651 6177926 D hypothetical protein 6177651..6177926 Rhodopirellula baltica SH 1 1795689 NP_869954.1 CDS RB11395 NC_005027.1 6178039 6178434 D PMID: 9384377 best DB hits: BLAST: pir:G69987; hypothetical protein ytaB - Bacillus subtilis -----; E=2e-08 gb:AAF01195.1; AF179401_4 (AF179401) TspO [Sinorhizobium meliloti]; E=8e-08 pir:A57438; tryptophan-rich sensory protein [similarity] -; E=9e-05 PFAM: PF01061; ABC-2 type transporter; E=0.13; hypothetical protein 6178039..6178434 Rhodopirellula baltica SH 1 1790275 NP_869955.1 CDS RB11396 NC_005027.1 6178445 6178555 D hypothetical protein 6178445..6178555 Rhodopirellula baltica SH 1 1793953 NP_869956.1 CDS RB11397 NC_005027.1 6178540 6179163 D PMID: 9371463 best DB hits: BLAST: pir:B69020; hypothetical protein MTH115 - Methanobacterium; E=2e-17 gb:AAD32774.1; AC007661_11 (AC007661) unknown protein [Arabidopsis; E=4e-09 ddbj:BAA96146.1; (AP002092) ESTs; E=3e-07; hypothetical protein 6178540..6179163 Rhodopirellula baltica SH 1 1793682 NP_869957.1 CDS RB11399 NC_005027.1 6179167 6179565 D PMID: 8905231 best DB hits: BLAST: pir:S75732; hypothetical protein slr0919 - Synechocystis sp. (strain; E=1e-14 ddbj:BAB10296.1; (AB026650) gene_id:MPF21.11~pir S75732~similar; E=3e-13 pir:H82154; conserved hypothetical protein VC1812 [imported] -; E=6e-07 COG: slr0919; COG3011 Uncharacterized BCR; E=1e-15; hypothetical protein 6179167..6179565 Rhodopirellula baltica SH 1 1792265 NP_869958.1 CDS RB11401 NC_005027.1 6179585 6182800 R PMID: 97000351 best DB hits: BLAST: embl:CAB65593.1; (AL136058) helicase [Streptomyces; E=0.0 pir:H82276; helicase-related protein VC0812 [imported] - Vibrio; E=1e-64 gb:AAB64767.1; (U32517) Ydr332wp [Saccharomyces cerevisiae]; E=4e-21 COG: VC0812_2; COG1061 DNA or RNA helicases of superfamily II; E=1e-57 hsdR; COG0610 Restriction enzymes type I helicase subunits and; E=9e-06 PH0210; COG1061 DNA or RNA helicases of superfamily II; E=7e-05 PFAM: PF00270; DEAD/DEAH box helicase; E=0.00054 PF00271; Helicase conserved C-terminal doma; E=7.7e-14; helicase complement(6179585..6182800) Rhodopirellula baltica SH 1 1791440 NP_869959.1 CDS RB11403 NC_005027.1 6182791 6183744 R best DB hits: PFAM: PF01549; Domain of unknown function DUF18; E=0.1; hypothetical protein complement(6182791..6183744) Rhodopirellula baltica SH 1 1791587 NP_869960.1 CDS RB11405 NC_005027.1 6183795 6184535 R best DB hits: BLAST: embl:CAA07132.1; (AJ006589) gp7 [Bacteriophage phi-C31]; E=0.66; hypothetical protein complement(6183795..6184535) Rhodopirellula baltica SH 1 1791797 NP_869961.1 CDS hsdR NC_005027.1 6184457 6186298 D PMID: 8412658 best DB hits: BLAST: swissprot:Q07736; T1RA_ECOLI TYPE I RESTRICTION ENZYME ECOAI R; E=3e-33 gb:AAG59531.1; AE005666_3 (AE005666) restriction; E=3e-33 swissprot:P08956; T1RK_ECOLI TYPE I RESTRICTION ENZYME ECOKI R; E=4e-29 COG: hsdR; COG0610 Restriction enzymes type I helicase subunits and; E=4e-30 YDR332w; COG1061 DNA or RNA helicases of superfamily II; E=2e-09 MJECL40; COG0610 Restriction enzymes type I helicase subunits and; E=0.001 PFAM: PF00270; DEAD/DEAH box helicase; E=0.14 PF00271; Helicase conserved C-terminal doma; E=0.6; type I restriction enzyme EcoAI R protein 6184457..6186298 Rhodopirellula baltica SH 1 1795152 NP_869962.1 CDS RB11408 NC_005027.1 6186295 6186735 D hypothetical protein 6186295..6186735 Rhodopirellula baltica SH 1 1792337 NP_869963.1 CDS hsdM NC_005027.1 6186739 6187794 D PMID: 8412658 best DB hits: BLAST: swissprot:Q47282; T1ME_ECOLI TYPE I RESTRICTION ENZYME ECOEI M; E=4e-13 gb:AAG59530.1; AE005666_2 (AE005666) restriction; E=1e-12 pir:A47200; EcoA system protein M - Escherichia coli ----- gb:; E=2e-12 COG: Rv2756c; COG0286 Type I restriction-modification system; E=4e-10 PFAM: PF02506; Type I restriction modification s; E=3.3e-06; type I restriction enzyme M protein 6186739..6187794 Rhodopirellula baltica SH 1 1794401 NP_869964.1 CDS hsdS NC_005027.1 6187922 6189079 D PMID: 6304321 best DB hits: BLAST: embl:CAA10700.1; (AJ132566) HsdS protein [Escherichia coli]; E=5e-13 swissprot:P06990; T1SB_ECOLI TYPE I RESTRICTION ENZYME ECOBI; E=2e-10 gb:AAG18734.1; (AE004978) type I restriction modification enzyme,; E=4e-09 COG: VNG0107G; COG0732 Restriction endonuclease S subunits; E=4e-10 PFAM: PF01420; Type I restriction modification D; E=3.3e-06; Type I restriction enzyme EcoBI specificity protein 6187922..6189079 Rhodopirellula baltica SH 1 1792717 NP_869965.1 CDS RB11415 NC_005027.1 6189076 6190896 D PMID: 4515613 PMID: 354508 PMID: 6221115 best DB hits: BLAST: gb:AAA96561.1; (J02459) ea59 (525) [bacteriophage lambda]; E=5e-05 pir:S49559; phage Hau3 resistance protein - Streptomyces lividans; E=2e-04 gb:AAK02366.1; (AE006063) unknown [Pasteurella multocida]; E=0.014 PFAM: PF02463; SMC domain N terminal domain; E=0.039; hypothetical protein 6189076..6190896 Rhodopirellula baltica SH 1 1793659 NP_869966.1 CDS RB11416 NC_005027.1 6190901 6191992 D PMID: 12003951 best DB hits: BLAST: gb:AAK02367.1; (AE006063) unknown [Pasteurella multocida]; E=0.049 gb:AAA96560.1; (J02459) ea31 (296) [bacteriophage lambda]; E=0.19; hypothetical protein 6190901..6191992 Rhodopirellula baltica SH 1 1791168 NP_869967.1 CDS arr1 NC_005027.1 6192077 6192388 R PMID: 7929436 best DB hits: BLAST: swissprot:P51486; ARR1_CALVI PHOSRESTIN II (ARRESTIN A) (ARRESTIN; E=0.15 swissprot:P15372; ARRA_DROME PHOSRESTIN II (ARRESTIN A) (ARRESTIN; E=0.89; phosrestin complement(6192077..6192388) Rhodopirellula baltica SH 1 1796814 NP_869968.1 CDS nfi NC_005027.1 6192385 6192909 R PMID: 20365717 best DB hits: BLAST: pir:E75309; conserved hypothetical protein - Deinococcus radiodurans; E=2e-34 pir:T35251; probable endonuclease - Streptomyces coelicolor -----; E=3e-04 pir:A82625; endonuclease V (deoxyinosine 3'endonuclease) XF1892; E=0.005 COG: DR2162; COG1515 Deoxyinosine 3'endonuclease (endonuclease V); E=2e-35; endonuclease V complement(6192385..6192909) Rhodopirellula baltica SH 1 1790763 NP_869969.1 CDS RB11420 NC_005027.1 6192938 6193786 R hypothetical protein complement(6192938..6193786) Rhodopirellula baltica SH 1 1790071 NP_869970.1 CDS rsr NC_005027.1 6193880 6195538 R PMID: 10567266 PMID: 10766734 best DB hits: BLAST: swissprot:Q9RUW8; RO60_DEIRA 60-KDA SS-ARO RIBONUCLEOPROTEIN; E=2e-17 gb:AAC53142.1; (U66843) Mus musculus 60kDa SS-ARo; E=1e-11 pir:T36919; hypothetical protein SCI7.23c - Streptomyces coelicolor; E=1e-11; 60-kDa SS-A/Ro ribonucleoprotein complement(6193880..6195538) Rhodopirellula baltica SH 1 1793464 NP_869971.1 CDS RB11424 NC_005027.1 6195656 6196132 D hypothetical protein 6195656..6196132 Rhodopirellula baltica SH 1 1792593 NP_869972.1 CDS RB11427 NC_005027.1 6196136 6196417 D hypothetical protein 6196136..6196417 Rhodopirellula baltica SH 1 1795192 NP_869973.1 CDS RB11429 NC_005027.1 6196478 6196591 D hypothetical protein 6196478..6196591 Rhodopirellula baltica SH 1 1792583 NP_869974.1 CDS RB11431 NC_005027.1 6196640 6196948 R hypothetical protein complement(6196640..6196948) Rhodopirellula baltica SH 1 1793253 NP_869975.1 CDS RB11432 NC_005027.1 6196988 6197188 R hypothetical protein complement(6196988..6197188) Rhodopirellula baltica SH 1 1792552 NP_869976.1 CDS RB11434 NC_005027.1 6197233 6197442 R hypothetical protein complement(6197233..6197442) Rhodopirellula baltica SH 1 1792365 NP_869977.1 CDS RB11436 NC_005027.1 6197429 6197707 R hypothetical protein complement(6197429..6197707) Rhodopirellula baltica SH 1 1794433 NP_869978.1 CDS RB11438 NC_005027.1 6197762 6197926 R best DB hits: BLAST: swissprot:P06979; YECA_ECOLI HYPOTHETICAL 25.0 KD PROTEIN IN; E=5e-05 gb:AAG56897.1; AE005412_7 (AE005412) orf, hypothetical protein; E=5e-05 pir:G82437; SecA-related protein VCA0628 [imported] - Vibrio; E=1e-04 COG: yecA; COG3318 Predicted metal-binding protein related to the; E=4e-06 ychJ; COG3012 Uncharacterized BCR; E=4e-04 secA; COG0653 Preprotein translocase subunit SecA (ATPase, RNA; E=8e-04 PFAM: PF02810; SEC-C motif; E=2.2e-06; Zn-binding protein complement(6197762..6197926) Rhodopirellula baltica SH 1 1794580 NP_869979.1 CDS RB11439 NC_005027.1 6197993 6198274 D hypothetical protein 6197993..6198274 Rhodopirellula baltica SH 1 1794040 NP_869980.1 CDS RB11446 NC_005027.1 6199492 6199833 D hypothetical protein 6199492..6199833 Rhodopirellula baltica SH 1 1790789 NP_869981.1 CDS RB11450 NC_005027.1 6200046 6200228 D hypothetical protein 6200046..6200228 Rhodopirellula baltica SH 1 1792879 NP_869982.1 CDS RB11452 NC_005027.1 6200405 6200599 R hypothetical protein complement(6200405..6200599) Rhodopirellula baltica SH 1 1793716 NP_869983.1 CDS RB11461 NC_005027.1 6202404 6202862 R hypothetical protein complement(6202404..6202862) Rhodopirellula baltica SH 1 1792930 NP_869984.1 CDS RB11462 NC_005027.1 6202949 6203338 D best DB hits: BLAST: pir:F75091; hypothetical protein PAB1624 - Pyrococcus abyssi (strain; E=1e-12 pir:F71051; hypothetical protein PH1109 - Pyrococcus horikoshii; E=7e-12 pir:H72254; conserved hypothetical protein - Thermotoga maritima; E=2e-11 COG: PAB1624; COG1832 Uncharacterized ACR; E=1e-13 AF0932; COG1042 Acyl-CoA synthetase (NDP forming); E=2e-11 yccU; COG1832 Uncharacterized ACR; E=3e-09 PFAM: PF02629; Uncharacterized ACR, COG1832; E=9.2e-17; hypothetical protein 6202949..6203338 Rhodopirellula baltica SH 1 1795895 NP_869985.1 CDS RB11463 NC_005027.1 6203375 6204886 R best DB hits: PFAM: PF01011; PQQ enzyme repeat; E=0.39; hypothetical protein complement(6203375..6204886) Rhodopirellula baltica SH 1 1790394 NP_869986.1 CDS RB11468 NC_005027.1 6204918 6205637 R hypothetical protein complement(6204918..6205637) Rhodopirellula baltica SH 1 1794584 NP_869987.1 CDS RB11469 NC_005027.1 6205661 6205771 D hypothetical protein 6205661..6205771 Rhodopirellula baltica SH 1 1790134 NP_869988.1 CDS RB11470 NC_005027.1 6205748 6207751 R best DB hits: BLAST: swissprot:O26373; Y273_METTH HYPOTHETICAL PROTEIN MTH273 -----; E=2e-10 swissprot:O67293; YC50_AQUAE HYPOTHETICAL PROTEIN AQ_1250 -----; E=3e-08 swissprot:O58984; YC69_PYRHO HYPOTHETICAL PROTEIN PH1269 -----; E=7e-06 COG: MTH273; COG1881 Phospholipid-binding protein; E=2e-11; phospholipid-binding protein complement(6205748..6207751) Rhodopirellula baltica SH 1 1793590 NP_869989.1 CDS RB11471 NC_005027.1 6207748 6208881 R best DB hits: BLAST: pir:T05344; hypothetical protein F8B4.40 - Arabidopsis thaliana; E=0.79; hypothetical protein complement(6207748..6208881) Rhodopirellula baltica SH 1 1794674 NP_869990.1 CDS RB11473 NC_005027.1 6208842 6209513 R best DB hits: PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=2.9e-07; hypothetical protein complement(6208842..6209513) Rhodopirellula baltica SH 1 1794230 NP_869991.1 CDS RB11475 NC_005027.1 6209468 6209641 D hypothetical protein 6209468..6209641 Rhodopirellula baltica SH 1 1791446 NP_869992.1 CDS RB11476 NC_005027.1 6209611 6210201 D PMID: 7610040 best DB hits: BLAST: swissprot:P39368; YJHQ_ECOLI HYPOTHETICAL 20.0 KDA PROTEIN IN; E=6e-21 pir:B82297; probable acetyltransferase VC0655 [imported] - Vibrio; E=7e-13 gb:AAK04154.1; AE006244_3 (AE006244) HYPOTHETICAL PROTEIN; E=6e-10 COG: yjhQ; COG3153 Predicted acetyltransferase; E=6e-22 PFAM: PF00583; Acetyltransferase (GNAT) family; E=2.2e-10; acetyltransferase 6209611..6210201 Rhodopirellula baltica SH 1 1795282 NP_869993.1 CDS RB11478 NC_005027.1 6210389 6210799 D hypothetical protein 6210389..6210799 Rhodopirellula baltica SH 1 1794384 NP_869994.1 CDS RB11480 NC_005027.1 6210741 6211241 D PMID: 8521301 best DB hits: BLAST: pir:C82396; transcriptional regulator MarR family VCA0955 [imported] -; E=2e-04 gb:AAD05186.1; (AF110185) unknown [Burkholderia pseudomallei]; E=4e-04 pir:F82675; transcriptional regulator MarREmrR family XF1490; E=7e-04 COG: VCA0955; COG1846 Transcriptional regulators; E=2e-05 PFAM: PF01047; MarR family; E=7.4e-09; MarR family transcriptional regulator 6210741..6211241 Rhodopirellula baltica SH 1 1794432 NP_869995.1 CDS RB11482 NC_005027.1 6211246 6212610 D PMID: 92267380 PMID: 96067120 best DB hits: BLAST: pir:JC1118; alkyl sulfatase (EC 3.1.6.-) - Pseudomonas sp -----; E=1e-60 pir:G83552; probable beta-lactamase PA0740 [imported] - Pseudomonas; E=2e-47 embl:CAA99186.1; (Z74906) ORF YOL164w [Saccharomyces cerevisiae]; E=2e-42 COG: PA0740; COG2015 Alkyl sulfatase and related hydrolases; E=2e-48 aq_1798; COG0491 Zn-dependent hydrolases, including glyoxylases; E=4e-10 PFAM: PF00753; Metallo-beta-lactamase superfamil; E=2.1e-27 PF02151; UvrB/uvrC motif; E=0.2 PF01656; Cobyrinic acid a,c-diamide syntha; E=0.44; alkyl sulfatase or beta-lactamase 6211246..6212610 Rhodopirellula baltica SH 1 1791055 NP_869996.1 CDS RB11484 NC_005027.1 6212611 6212742 R hypothetical protein complement(6212611..6212742) Rhodopirellula baltica SH 1 1795261 NP_869997.1 CDS RB11485 NC_005027.1 6212721 6213389 D hypothetical protein 6212721..6213389 Rhodopirellula baltica SH 1 1791202 NP_869998.1 CDS RB11487 NC_005027.1 6213464 6213889 D PMID: 10984043 best DB hits: BLAST: pir:H83235; hypothetical protein PA3281 [imported] - Pseudomonas; E=0.002 gb:AAK02297.1; (AE006055) unknown [Pasteurella multocida]; E=0.005 pir:E83286; conserved hypothetical protein PA2864 [imported] -; E=0.062 COG: PA2864; COG2259 Predicted membrane protein; E=0.006; hypothetical protein 6213464..6213889 Rhodopirellula baltica SH 1 1796910 NP_869999.1 CDS RB11488 NC_005027.1 6213893 6214690 D member of a large family of NAD or NADP-dependent oxidoreductases; paralogs occur in many bacteria; short chain dehydrogenase 6213893..6214690 Rhodopirellula baltica SH 1 1794239 NP_870000.1 CDS RB11489 NC_005027.1 6214769 6215521 D PMID: 8698519 PMID: 97000351 best DB hits: BLAST: embl:CAB59476.1; (AL132648) hypothetical protein SCI41.06; E=1e-31 swissprot:Q56743; VIUB_VIBVU VULNIBACTIN UTILIZATION PROTEIN VIUB; E=5e-31 swissprot:Q56646; VIUB_VIBCH VIBRIOBACTIN UTILIZATION PROTEIN VIUB; E=9e-30 COG: VC2210; COG2375 Siderophore-interacting protein; E=9e-31; vulnibactin utilization protein VIUB 6214769..6215521 Rhodopirellula baltica SH 1 1794275 NP_870001.1 CDS RB11490 NC_005027.1 6215558 6216103 D PMID: 11248100 best DB hits: BLAST: gb:AAK04020.1; (AE006230) unknown [Pasteurella multocida]; E=0.010; transmembrane protein 6215558..6216103 Rhodopirellula baltica SH 1 1792674 NP_870002.1 CDS RB11492 NC_005027.1 6216103 6216390 D hypothetical protein 6216103..6216390 Rhodopirellula baltica SH 1 1795473 NP_870003.1 CDS RB11493 NC_005027.1 6216432 6216587 R hypothetical protein complement(6216432..6216587) Rhodopirellula baltica SH 1 1794316 NP_870004.1 CDS RB11494 NC_005027.1 6216550 6217431 D PMID: 10086841 PMID: 10086842 PMID: 10192928 best DB hits: BLAST: ddbj:BAB04024.1; (AP001508) BH0305~unknown conserved protein in; E=4e-31 gb:AAG59409.1; AE005653_10 (AE005653) oxidoreductase; E=2e-23 swissprot:P39315; YTFG_ECOLI HYPOTHETICAL 29.7 KD PROTEIN IN; E=4e-23 COG: BH0305; COG0702 Predicted nucleoside-diphosphate-sugar epimerases; E=3e-32 PFAM: PF01073; 3-beta hydroxysteroid dehydrogenase; E=0.023; hypothetical protein 6216550..6217431 Rhodopirellula baltica SH 1 1790174 NP_870005.1 CDS RB11496 NC_005027.1 6217440 6217643 D hypothetical protein 6217440..6217643 Rhodopirellula baltica SH 1 1790745 NP_870006.1 CDS RB11497 NC_005027.1 6217712 6218449 D PMID: 8905231 best DB hits: BLAST: pir:S74850; hypothetical protein slr0865 - Synechocystis sp. (strain; E=4e-24 pir:F70793; hypothetical protein Rv3701c - Mycobacterium; E=5e-23 embl:CAC02633.1; (AL390114) possible hypothetical 35.4 Kd protein; E=3e-22; hypothetical protein 6217712..6218449 Rhodopirellula baltica SH 1 1795286 NP_870007.1 CDS RB11498 NC_005027.1 6218361 6219701 D PMID: 97000351 best DB hits: BLAST: embl:CAB62702.1; (AL133422) hypothetical protein SCM1.44.; E=4e-37 pir:H70793; hypothetical protein Rv3703c - Mycobacterium; E=3e-24 pir:S74705; hypothetical protein slr1303 - Synechocystis sp. (strain; E=3e-21 COG: Rv3703c; COG1262 Uncharacterized BCR; E=3e-25; hypothetical protein 6218361..6219701 Rhodopirellula baltica SH 1 1792939 NP_870008.1 CDS RB11502 NC_005027.1 6219763 6221100 D PMID: 92267380 best DB hits: BLAST: pir:JC1118; alkyl sulfatase (EC 3.1.6.-) - Pseudomonas sp -----; E=3e-54 gb:AAG59281.1; AE005641_6 (AE005641) orf, hypothetical protein; E=4e-41 gb:AAC43177.1; (U00006) matches PS00743: Beta-lactamases class B; E=8e-41 COG: yjcS; COG2015 Alkyl sulfatase and related hydrolases; E=8e-42 aq_974; COG0491 Zn-dependent hydrolases, including glyoxylases; E=0.002 PFAM: PF00753; Metallo-beta-lactamase superf; E=1.2e-29; alkyl sulfatase or beta-lactamase 6219763..6221100 Rhodopirellula baltica SH 1 1791680 NP_870009.1 CDS RB11504 NC_005027.1 6221067 6221285 R hypothetical protein complement(6221067..6221285) Rhodopirellula baltica SH 1 1792767 NP_870010.1 CDS RB11505 NC_005027.1 6221230 6221829 R PMID: 8905231 best DB hits: BLAST: pir:S76701; hypothetical protein - Synechocystis sp. (strain PCC; E=1e-11 pir:T04873; hypothetical protein F28A21.220 - Arabidopsis thaliana; E=5e-10 gb:AAD34060.1; AF151823_1 (AF151823) CGI-65 protein [Homo sapiens]; E=1e-07 COG: sll0096; COG0702 Predicted nucleoside-diphosphate-sugar epimerases; E=1e-12; hypothetical protein complement(6221230..6221829) Rhodopirellula baltica SH 1 1791761 NP_870011.1 CDS RB11506 NC_005027.1 6221923 6222135 R PMID: 1732207 PMID: 8547259 best DB hits: BLAST: swissprot:P45418; YKDK_ERWCH HYPOTHETICAL 8.1 KD PROTEIN IN KDGK; E=3e-06 pir:H81078; 4-oxalocrotonate tautomerase, probable NMB1474; E=8e-06 gb:AAG42543.1; (AY013584) isomerase [Sinorhizobium; E=2e-04 COG: NMB1474; COG1942 Uncharacterized protein, 4-oxalocrotonate; E=8e-07 PFAM: PF01361; Tautomerase enzyme; E=1.2e-06; 4-oxalocrotonate tautomerase complement(6221923..6222135) Rhodopirellula baltica SH 1 1791369 NP_870012.1 CDS RB11509 NC_005027.1 6222153 6222488 R hypothetical protein complement(6222153..6222488) Rhodopirellula baltica SH 1 1790454 NP_870013.1 CDS RB11510 NC_005027.1 6222485 6223285 R PMID: 1435734 best DB hits: BLAST: ddbj:BAB05504.1; (AP001513) chaperonin involved in protein; E=5e-21 swissprot:P37584; CSAA_BACSU CSAA PROTEIN ----- pir: E69607; E=1e-20 pir:A83243; CsaA protein PA3221 [imported] - Pseudomonas aeruginosa; E=1e-20 COG: BH1785; COG0073 EMAP domain; E=5e-22 PFAM: PF01588; tRNA binding domain; E=2.3e-13; chaperonin involved in protein secretion (CsaA protein) complement(6222485..6223285) Rhodopirellula baltica SH 1 1792738 NP_870014.1 CDS RB11512 NC_005027.1 6223454 6224287 D PMID: 8586283 best DB hits: BLAST: ddbj:BAB04002.1; (AP001508) BH0283~unknown conserved protein; E=5e-62 pir:E83199; conserved hypothetical protein PA3578 [imported] -; E=1e-57 pir:A83301; hypothetical protein PA2770 [imported] - Pseudomonas; E=3e-56 COG: BH0283; COG0384 Predicted epimerase, PhzC/PhzF homolog; E=5e-63 PFAM: PF02567; Phenazine biosynthesis-like protein; E=7.7e-27; phenazine biosynthesis protein PhzF 6223454..6224287 Rhodopirellula baltica SH 1 1793286 NP_870015.1 CDS RB11515 NC_005027.1 6224420 6224644 D PMID: 10952301 best DB hits: BLAST: pir:H82471; hypothetical protein VCA0329 VCA0298 VCA0343; E=1e-09; hypothetical protein 6224420..6224644 Rhodopirellula baltica SH 1 1793187 NP_870016.1 CDS RB11516 NC_005027.1 6224708 6225331 R PMID: 9868367 best DB hits: BLAST: ddbj:BAB06554.1; (AP001516) BH2835~unknown conserved protein; E=7e-30 gb:AAK04163.1; AE006245_2 (AE006245) conserved hypothetical; E=5e-26 swissprot:P54168; YPGQ_BACSU HYPOTHETICAL 23.1 KD PROTEIN IN; E=8e-26 COG: BH2835; COG1418 Predicted HD superfamily hydrolase; E=7e-31 PFAM: PF01966; HD domain; E=2e-14; hypothetical protein complement(6224708..6225331) Rhodopirellula baltica SH 1 1795219 NP_870017.1 CDS RB11518 NC_005027.1 6225316 6226065 R PMID: 10217496 best DB hits: BLAST: embl:CAB40581.1; (AJ010128) DNA alkylation repair enzyme; E=0.079 gb:AAK06230.1; AE006441_8 (AE006441) UNKNOWN PROTEIN [Lactococcus; E=0.13; DNA alkylation repair protein complement(6225316..6226065) Rhodopirellula baltica SH 1 1796763 NP_870018.1 CDS RB11519 NC_005027.1 6226043 6226288 R hypothetical protein complement(6226043..6226288) Rhodopirellula baltica SH 1 1793677 NP_870019.1 CDS RB11521 NC_005027.1 6226331 6226438 R hypothetical protein complement(6226331..6226438) Rhodopirellula baltica SH 1 1792407 NP_870020.1 CDS RB11522 NC_005027.1 6226435 6226890 R hypothetical protein complement(6226435..6226890) Rhodopirellula baltica SH 1 1794755 NP_870021.1 CDS RB11524 NC_005027.1 6226887 6227744 R PMID: 10688204 best DB hits: BLAST: pir:A81289; hypothetical protein Cj1433c [imported] - Campylobacter; E=2e-07 pir:E71020; hypothetical protein PH1458 - Pyrococcus horikoshii; E=5e-04 gb:AAD45550.1; U70376_15 (U70376) SpcY [Streptomyces netropsis]; E=0.077 COG: PH1458; COG1964 Predicted Fe-S oxidoreductases; E=5e-05; Fe-S oxidoreductase complement(6226887..6227744) Rhodopirellula baltica SH 1 1792403 NP_870022.1 CDS RB11525 NC_005027.1 6227668 6228693 R hypothetical protein complement(6227668..6228693) Rhodopirellula baltica SH 1 1790553 NP_870023.1 CDS RB11527 NC_005027.1 6228684 6229397 R PMID: 7515051 best DB hits: BLAST: gb:AAA39802.1; (L30104) N-acetylgalactosaminyltransferase [Mus; E=2e-06 PFAM: PF00535; Glycosyl transferase; E=6.9e-07; N-acetylgalactosaminyltransferase complement(6228684..6229397) Rhodopirellula baltica SH 1 1795632 NP_870024.1 CDS RB11529 NC_005027.1 6229390 6230154 R PMID: 1601877 best DB hits: BLAST: gb:AAA35516.1; (M83651) beta-1,4; E=6e-07 ddbj:BAA04632.1; (D17809) beta-4N-acetylgalactosaminyltransferase; E=2e-06 gb:AAA39802.1; (L30104) N-acetylgalactosaminyltransferase [Mus; E=2e-06 COG: BS_yveT; COG0463 Glycosyltransferases involved in cell wall; E=0.003 PFAM: PF00535; Glycosyl transferase; E=5.2e-08; beta-1,4 N-acetylgalactosaminyltransferase complement(6229390..6230154) Rhodopirellula baltica SH 1 1795916 NP_870025.1 CDS RB11533 NC_005027.1 6230151 6231488 R PMID: 9477341 best DB hits: BLAST: embl:CAC00604.2; (AL359776) hypothetical protein L5649.08; E=3e-07 pir:T20368; hypothetical protein D2045.9 - Caenorhabditis elegans; E=0.064 gb:AAD51367.1; AF177203_1 (AF177203) cerebral cell adhesion; E=0.26; hypothetical protein complement(6230151..6231488) Rhodopirellula baltica SH 1 1792490 NP_870026.1 CDS RB11537 NC_005027.1 6231499 6232071 R hypothetical protein complement(6231499..6232071) Rhodopirellula baltica SH 1 1790566 NP_870027.1 CDS RB11539 NC_005027.1 6232054 6232716 D hypothetical protein 6232054..6232716 Rhodopirellula baltica SH 1 1791804 NP_870028.1 CDS RB11540 NC_005027.1 6232068 6234077 R signal peptide complement(6232068..6234077) Rhodopirellula baltica SH 1 1793582 NP_870029.1 CDS RB11542 NC_005027.1 6232741 6233466 D hypothetical protein 6232741..6233466 Rhodopirellula baltica SH 1 1791897 NP_870030.1 CDS RB11543 NC_005027.1 6233896 6234465 D hypothetical protein 6233896..6234465 Rhodopirellula baltica SH 1 1793609 NP_870031.1 CDS RB11545 NC_005027.1 6234584 6235075 R signal peptide complement(6234584..6235075) Rhodopirellula baltica SH 1 1790639 NP_870032.1 CDS RB11548 NC_005027.1 6235200 6236972 R signal peptide complement(6235200..6236972) Rhodopirellula baltica SH 1 1794059 NP_870033.1 CDS drga NC_005027.1 6237028 6237633 R PMID: 9654132 PMID: 8905231 best DB hits: BLAST: pir:S75047; drgA protein - Synechocystis sp. (strain PCC 6803); E=3e-60 swissprot:Q55233; DRGA_SYNY3 DRGA PROTEIN ----- gb: AAA91952.1; E=7e-56 pir:E82996; probable nitroreductase PA5190 [imported] - Pseudomonas; E=7e-41 COG: slr1719; COG0778 Nitroreductase; E=3e-61 PFAM: PF00881; Nitroreductase; E=1.3e-44; drgA protein complement(6237028..6237633) Rhodopirellula baltica SH 1 1791284 NP_870034.1 CDS RB11551 NC_005027.1 6237704 6237922 R hypothetical protein complement(6237704..6237922) Rhodopirellula baltica SH 1 1790519 NP_870035.1 CDS RB11553 NC_005027.1 6238060 6238770 R hypothetical protein complement(6238060..6238770) Rhodopirellula baltica SH 1 1795276 NP_870036.1 CDS RB11559 NC_005027.1 6238803 6240191 D PMID: 8905231 best DB hits: BLAST: pir:S75116; squalene-hopene-cyclase - Synechocystis sp. (strain PCC; E=0.16; squalene-hopene-cyclase 6238803..6240191 Rhodopirellula baltica SH 1 1795422 NP_870037.1 CDS RB11563 NC_005027.1 6240630 6241703 D PMID: 1924314 best DB hits: BLAST: ddbj:BAB04773.1; (AP001510) transposase (08)ABC transporter; E=2e-53 ddbj:BAA83955.1; (AB024563) YFIL [Bacillus halodurans]; E=1e-52 ddbj:BAB05817.1; (AP001514) ABC transporter (ATP-binding protein); E=9e-52 COG: BH1054_2; COG0842 Permease component of an ABC-transporter; E=8e-54 BH2098; COG1131 ABC-type multidrug transport system, ATPase; E=8e-53 ybhF; COG1131 ABC-type multidrug transport system, ATPase component; E=5e-35 PFAM: PF00005; ABC transporter; E=2.1e-54; ABC-type multidrug transport system, ATPase component 6240630..6241703 Rhodopirellula baltica SH 1 1792162 NP_870038.1 CDS RB11564 NC_005027.1 6241706 6243034 D PMID: 9384377 best DB hits: BLAST: pir:H69803; ABC transporter (ATP-binding protein) homolog yfiM -; E=1e-05 ddbj:BAA83956.1; (AB024563) YFIM [Bacillus halodurans]; E=0.83 ddbj:BAB04774.1; (AP001510) BH1055~unknown conserved protein; E=0.83 COG: BS_yfiM; COG0842 Permease component of an ABC-transporter; E=1e-06; ABC transporter permease 6241706..6243034 Rhodopirellula baltica SH 1 1790675 NP_870039.1 CDS RB11566 NC_005027.1 6243111 6243698 D hypothetical protein 6243111..6243698 Rhodopirellula baltica SH 1 1792908 NP_870040.1 CDS RB11569 NC_005027.1 6243814 6244071 R hypothetical protein complement(6243814..6244071) Rhodopirellula baltica SH 1 1795252 NP_870041.1 CDS RB11573 NC_005027.1 6244084 6244758 R hypothetical protein complement(6244084..6244758) Rhodopirellula baltica SH 1 1793336 NP_870042.1 CDS RB11575 NC_005027.1 6244601 6245650 D best DB hits: PFAM: PF00432; Prenyltransferase and squalene ox; E=0.0052; hypothetical protein 6244601..6245650 Rhodopirellula baltica SH 1 1790338 NP_870043.1 CDS RB11578 NC_005027.1 6245659 6246465 D hypothetical protein 6245659..6246465 Rhodopirellula baltica SH 1 1789960 NP_870044.1 CDS dnaA NC_005027.1 6246565 6247827 R PMID: 2987847 PMID: 7584024 PMID: 2846289 best DB hits: BLAST: swissprot:P49994; DNAA_STAAU CHROMOSOMAL REPLICATION INITIATOR; E=1e-29 swissprot:P05648; DNAA_BACSU CHROMOSOMAL REPLICATION INITIATOR; E=4e-29 swissprot:P35887; DNAA_CAUCR CHROMOSOMAL REPLICATION INITIATOR; E=1e-28 COG: BS_dnaA; COG0593 ATPase involved in DNA replication initiation; E=4e-30 PFAM: PF00004; ATPase associated with variou; E=0.00043 PF00308; Bacterial dnaA protein; E=2e-48; chromosome replication initiator DnaA complement(6246565..6247827) Rhodopirellula baltica SH 1 1790917 NP_870045.1 CDS RB11582 NC_005027.1 6247852 6249048 R PMID: 10908675 PMID: 7496536 PMID: 8482384 best DB hits: BLAST: pir:A71960; probable nitrogenase cofactor synthesis protein nifS -; E=1e-50 pir:D64547; iron-sulfur cofactor synthesis protein - Helicobacter; E=2e-50 swissprot:Q43884; NIFS_ANAAZ NIFS PROTEIN ----- gb: AAA87249.1; E=6e-49 COG: jhp0206; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; E=1e-51 PFAM: PF00266; Aminotransferase class-V; E=1.6e-60; cysteine desulfurase complement(6247852..6249048) Rhodopirellula baltica SH 1 1791875 NP_870046.1 CDS RB11585 NC_005027.1 6249045 6249698 R hypothetical protein complement(6249045..6249698) Rhodopirellula baltica SH 1 1791460 NP_870047.1 CDS RB11587 NC_005027.1 6249757 6251379 D PMID: 10086841 best DB hits: BLAST: ddbj:BAB05280.1; (AP001512) BH1561~unknown conserved protein; E=4e-19 pir:B83247; hypothetical protein PA3197 [imported] - Pseudomonas; E=3e-17 pir:S72956; hypothetical protein - Mycobacterium leprae -----; E=4e-16 COG: BH1561; COG1386 Predicted transcriptional regulator containing the; E=4e-20 NMB0739_2; COG1386 Predicted transcriptional regulator containing; E=1e-05; transcriptional regulator 6249757..6251379 Rhodopirellula baltica SH 1 1795426 NP_870048.1 CDS RB11589 NC_005027.1 6250897 6251607 R transmembrane protein complement(6250897..6251607) Rhodopirellula baltica SH 1 1792608 NP_870049.1 CDS RB11593 NC_005027.1 6251620 6251835 R hypothetical protein complement(6251620..6251835) Rhodopirellula baltica SH 1 1793432 NP_870050.1 CDS RB11594 NC_005027.1 6251792 6252298 D PMID: 7699720 best DB hits: BLAST: ddbj:BAB05983.1; (AP001514) two-component response regulator; E=2e-09 gb:AAF12879.1; AF022186_1 (AF022186) unknown [Cyanidium caldarium]; E=5e-09 gb:AAD47845.1; AF171076_1 (AF171076) probable CheY1 protein; E=6e-09 COG: BH2264; COG0745 Response regulators consisting of a CheY-like; E=2e-10 VCA1096; COG0784 CheY-like receiver domains; E=6e-10 HP1365; COG0745 Response regulators consisting of a CheY-like; E=1e-09 PFAM: PF00072; Response regulator receiver doma; E=6.6e-17; two-component response regulator 6251792..6252298 Rhodopirellula baltica SH 1 1793664 NP_870051.1 CDS RB11595 NC_005027.1 6252371 6254134 D PMID: 1944223 best DB hits: BLAST: pir:C75333; general secretion pathway protein E - Deinococcus; E=6e-98 pir:E72032; general secretion pathway protein E CP1055 [imported] -; E=4e-89 pir:D71499; probable gen. secretion protein E - Chlamydia; E=1e-88 COG: DR1964; COG2804 Predicted ATPases involved in pili biogenesis, PilB; E=5e-99 PFAM: PF00437; Bacterial type II secretion system p; E=1.3e-138; general secretion pathway protein E 6252371..6254134 Rhodopirellula baltica SH 1 1790561 NP_870052.1 CDS RB11597 NC_005027.1 6254216 6255379 D PMID: 1640836 best DB hits: BLAST: pir:A75344; pilin biogenesis protein - Deinococcus radiodurans; E=4e-35 swissprot:P45793; TAPC_AERHY TYPE IV PILUS ASSEMBLY PROTEIN TAPC; E=2e-33 gb:AAC23568.1; (AF059249) type IV pilus assembly protein TapC; E=8e-33 COG: DR1863; COG1459 General secretory pathway protein F; E=3e-36 PFAM: PF00482; Bacterial type II secretion system p; E=2e-53; general secretion pathway protein F 6254216..6255379 Rhodopirellula baltica SH 1 1791381 NP_870053.1 CDS RB11598 NC_005027.1 6255376 6255735 D PMID: 10086841 best DB hits: BLAST: ddbj:BAB06546.1; (AP001516) exogenous DNA-binding protein; E=0.008 pir:T45730; peroxidase-like protein - Arabidopsis thaliana -----; E=0.46; exogenous DNA-binding protein 6255376..6255735 Rhodopirellula baltica SH 1 1791739 NP_870054.1 CDS RB11599 NC_005027.1 6255736 6256485 R hypothetical protein complement(6255736..6256485) Rhodopirellula baltica SH 1 1793495 NP_870055.1 CDS RB11601 NC_005027.1 6256500 6256712 D hypothetical protein 6256500..6256712 Rhodopirellula baltica SH 1 1792770 NP_870056.1 CDS RB11603 NC_005027.1 6256722 6256835 D hypothetical protein 6256722..6256835 Rhodopirellula baltica SH 1 1796794 NP_870057.1 CDS RB11604 NC_005027.1 6256871 6258829 R PMID: 11406410 PMID: 1574005 best DB hits: BLAST: pir:E83529; sensorresponse regulator hybrid PA0928 [imported] -; E=6e-47 pir:B82427; sensor protein TorS VCA0709 [imported] - Vibrio cholerae; E=1e-45 gb:AAF04854.1; AF197912_1 (AF197912) histidine protein kinase; E=8e-44 COG: PA0928; COG0642 Sensory transduction histidine kinases; E=6e-48 PFAM: PF00672; HAMP domain; E=3.8e-12 PF00512; His Kinase A (phosphoacceptor); E=2.4e-25 PF02518; Histidine kinase-, DNA gyrase; E=6.4e-40; sensory transduction histidine kinase complement(6256871..6258829) Rhodopirellula baltica SH 1 1790731 NP_870058.1 CDS RB11607 NC_005027.1 6258999 6260507 D best DB hits: BLAST: pir:T37781; probable cytoskeleton assembly control protein - fission; E=0.023 embl:CAA84826.1; (Z35768) ORF YBL007c [Saccharomyces cerevisiae]; E=0.037 pir:T50995; related to cytoskeleton assembly control protein SLA1; E=0.17; cytoskeleton assembly control protein 6258999..6260507 Rhodopirellula baltica SH 1 1792891 NP_870059.1 CDS RB11612 NC_005027.1 6260470 6260715 R hypothetical protein complement(6260470..6260715) Rhodopirellula baltica SH 1 1793984 NP_870060.1 CDS RB11615 NC_005027.1 6261140 6262327 D best DB hits: PFAM: PF00589; Phage integrase; E=4.9e-07; hypothetical protein 6261140..6262327 Rhodopirellula baltica SH 1 1794378 NP_870061.1 CDS RB11616 NC_005027.1 6262452 6262622 R hypothetical protein complement(6262452..6262622) Rhodopirellula baltica SH 1 1789949 NP_870062.1 CDS RB11617 NC_005027.1 6262796 6263689 R hypothetical protein complement(6262796..6263689) Rhodopirellula baltica SH 1 1791266 NP_870063.1 CDS RB11618 NC_005027.1 6263708 6265366 D PMID: 8412658 PMID: 9440532 best DB hits: BLAST: gb:AAG59530.1; AE005666_2 (AE005666) restriction; E=2e-32 swissprot:Q47282; T1ME_ECOLI TYPE I RESTRICTION ENZYME ECOEI M; E=2e-32 pir:A47200; EcoA system protein M - Escherichia coli ----- gb:; E=1e-31 COG: hsdM; COG0286 Type I restriction-modification system; E=3e-19 PFAM: PF02506; Type I restriction modification s; E=6.9e-10 PF02384; N-6 DNA Methylase; E=3.2e-16; type I restriction enzyme M protein 6263708..6265366 Rhodopirellula baltica SH 1 1792307 NP_870064.1 CDS RB11619 NC_005027.1 6265363 6266544 D PMID: 6304321 best DB hits: BLAST: gb:AAG18734.1; (AE004978) type I restriction modification enzyme,; E=6e-23 swissprot:P06990; T1SB_ECOLI TYPE I RESTRICTION ENZYME ECOBI; E=8e-16 pir:B64316; restriction modification system S chain homolog -; E=2e-12 COG: VNG0107G; COG0732 Restriction endonuclease S subunits; E=6e-24 PFAM: PF01420; Type I restriction modification; E=1.6e-10; type I restriction modification enzyme, S subunit 6265363..6266544 Rhodopirellula baltica SH 1 1792001 NP_870065.1 CDS RB11622 NC_005027.1 6266567 6269980 D PMID: 8412658 best DB hits: BLAST: gb:AAG59531.1; AE005666_3 (AE005666) restriction; E=5e-31 swissprot:Q07736; T1RA_ECOLI TYPE I RESTRICTION ENZYME ECOAI R; E=6e-31 swissprot:P08956; T1RK_ECOLI TYPE I RESTRICTION ENZYME ECOKI R; E=1e-30 COG: hsdR; COG0610 Restriction enzymes type I helicase subunits and; E=1e-31 VC0812_2; COG1061 DNA or RNA helicases of superfamily II; E=9e-13 MJECL40; COG0610 Restriction enzymes type I helicase subunits and; E=3e-05 PFAM: PF00270; DEAD/DEAH box helicase; E=1.5e-06 PF00271; Helicase conserved C-terminal doma; E=0.00061; type I restriction enzyme, R protein 6266567..6269980 Rhodopirellula baltica SH 1 1795209 NP_870066.1 CDS RB11624 NC_005027.1 6269998 6271044 D hypothetical protein 6269998..6271044 Rhodopirellula baltica SH 1 1792183 NP_870067.1 CDS RB11626 NC_005027.1 6271177 6272688 R PMID: 8051008 best DB hits: BLAST: pir:G69754; hypothetical protein yccF - Bacillus subtilis -----; E=0.030 ddbj:BAB07325.1; (AP001519) preprotein translocase subunit; E=0.082 pir:E81368; preprotein translocase SECA chain Cj0942c [imported] -; E=0.16 COG: BS_yccF; COG3318 Predicted metal-binding protein related to the; E=0.003 BH3606; COG0653 Preprotein translocase subunit SecA (ATPase, RNA; E=0.008 PFAM: PF02810; SEC-C motif; E=1.9e-08; preprotein translocase SecA chain complement(6271177..6272688) Rhodopirellula baltica SH 1 1792257 NP_870068.1 CDS RB11627 NC_005027.1 6272877 6273080 R hypothetical protein complement(6272877..6273080) Rhodopirellula baltica SH 1 1790642 NP_870069.1 CDS RB11628 NC_005027.1 6273215 6273466 R hypothetical protein complement(6273215..6273466) Rhodopirellula baltica SH 1 1790099 NP_870070.1 CDS RB11629 NC_005027.1 6273457 6273624 R hypothetical protein complement(6273457..6273624) Rhodopirellula baltica SH 1 1795702 NP_870071.1 CDS RB11631 NC_005027.1 6273726 6274040 D PMID: 8576032 best DB hits: PFAM: PF01418; Helix-turn-helix domain, rpiR; E=0.00028 PF01381; Helix-turn-helix; E=0.27; hypothetical protein 6273726..6274040 Rhodopirellula baltica SH 1 1795194 NP_870072.1 CDS RB11633 NC_005027.1 6274043 6274366 D hypothetical protein 6274043..6274366 Rhodopirellula baltica SH 1 1793413 NP_870073.1 CDS strR NC_005027.1 6274366 6275235 D PMID: 3118332 best DB hits: BLAST: swissprot:P08076; STRR_STRGR STREPTOMYCIN BIOSYNTHESIS OPERON; E=5e-04 pir:C26674; streptomycin resistance hypothetical protein I -; E=0.032 embl:CAB45047.1; (AL078635) transcriptional regulator; E=0.12; streptomycin biosynthesis operon regulatory protein 6274366..6275235 Rhodopirellula baltica SH 1 1792689 NP_870074.1 CDS RB11636 NC_005027.1 6275232 6275447 R hypothetical protein complement(6275232..6275447) Rhodopirellula baltica SH 1 1794379 NP_870075.1 CDS RB11637 NC_005027.1 6275480 6276829 D hypothetical protein 6275480..6276829 Rhodopirellula baltica SH 1 1795619 NP_870076.1 CDS RB11638 NC_005027.1 6276815 6276943 R hypothetical protein complement(6276815..6276943) Rhodopirellula baltica SH 1 1789983 NP_870077.1 CDS RB11639 NC_005027.1 6276931 6277122 D hypothetical protein 6276931..6277122 Rhodopirellula baltica SH 1 1790564 NP_870078.1 CDS RB11640 NC_005027.1 6277277 6277447 R hypothetical protein complement(6277277..6277447) Rhodopirellula baltica SH 1 1794632 NP_870079.1 CDS RB11641 NC_005027.1 6277621 6278514 R hypothetical protein complement(6277621..6278514) Rhodopirellula baltica SH 1 1794964 NP_870080.1 CDS RB11642 NC_005027.1 6278533 6280191 D PMID: 8412658 best DB hits: BLAST: gb:AAG59530.1; AE005666_2 (AE005666) restriction; E=1e-32 swissprot:Q47282; T1ME_ECOLI TYPE I RESTRICTION ENZYME ECOEI M; E=5e-32 pir:A47200; EcoA system protein M - Escherichia coli ----- gb:; E=5e-32 COG: hsdM; COG0286 Type I restriction-modification system; E=1e-19 PFAM: PF02506; Type I restriction modification s; E=7e-11 PF02384; N-6 DNA Methylase; E=1.9e-15; type I restriction enzym, M protein 6278533..6280191 Rhodopirellula baltica SH 1 1790986 NP_870081.1 CDS hsdS NC_005027.1 6280188 6281357 D PMID: 6304321 best DB hits: BLAST: pir:B64316; restriction modification system S chain homolog -; E=8e-25 pir:G82522; type I restriction-modification system specificity; E=3e-22 pir:C82823; type I restriction-modification system specificity; E=4e-22 COG: MJ0130m; COG0732 Restriction endonuclease S subunits; E=8e-26 PFAM: PF01420; Type I restriction modification D; E=2.6e-32; restriction modification system S chain-like protein 6280188..6281357 Rhodopirellula baltica SH 1 1795471 NP_870082.1 CDS RB11644 NC_005027.1 6281254 6282816 R PMID: 10545495 best DB hits: BLAST: gb:AAF63384.1; (AF245277) kinesin Unc104KIF1a homolog; E=0.024 swissprot:P08799; MYS2_DICDI MYOSIN II HEAVY CHAIN, NON MUSCLE; E=0.12 swissprot:P50533; XCPE_XENLA CHROMOSOME ASSEMBLY PROTEIN XCAP-E; E=0.14; kinesin Unc104/KIF1a-like protein complement(6281254..6282816) Rhodopirellula baltica SH 1 1793375 NP_870083.1 CDS RB11647 NC_005027.1 6282925 6283401 D hypothetical protein 6282925..6283401 Rhodopirellula baltica SH 1 1796920 NP_870084.1 CDS RB11649 NC_005027.1 6283377 6283484 D hypothetical protein 6283377..6283484 Rhodopirellula baltica SH 1 1791564 NP_870085.1 CDS RB11650 NC_005027.1 6283604 6284983 R PMID: 10086841 best DB hits: BLAST: gb:AAC23913.1; (AF039207) NADH-dependent dehydrogenase homolog; E=6e-10 gb:AAG09709.1; AF218837_4 (AF218837) unknown [Pasteurella; E=3e-09 ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=4e-09 COG: BH1248; COG0673 Predicted dehydrogenases and related proteins; E=4e-10 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=2.1e-18; NADH-dependent deydrogenase complement(6283604..6284983) Rhodopirellula baltica SH 1 1795330 NP_870086.1 CDS RB11652 NC_005027.1 6285093 6286004 R signal peptide complement(6285093..6286004) Rhodopirellula baltica SH 1 1795700 NP_870087.1 CDS RB11654 NC_005027.1 6286299 6287549 R PMID: 10984043 best DB hits: BLAST: swissprot:Q09296; YQO6_CAEEL HYPOTHETICAL 55.9 KD PROTEIN EEED8.6; E=3e-08 pir:H83290; conserved hypothetical protein PA2831 [imported] -; E=7e-07 pir:T33157; hypothetical protein F56H1.5 - Caenorhabditis elegans; E=9e-07 COG: PA2831; COG2866 Predicted carboxypeptidase; E=7e-08; carboxypeptidase complement(6286299..6287549) Rhodopirellula baltica SH 1 1794154 NP_870088.1 CDS RB11660 NC_005027.1 6288092 6290338 D PMID: 9371463 best DB hits: BLAST: pir:H69064; serinethreonine protein kinase related protein -; E=0.001 pir:T26310; hypothetical protein W09D6.1 - Caenorhabditis elegans; E=0.64 COG: MTH1485; COG1520 Uncharacterized proteins of WD40-like repeat family; E=1e-04 PFAM: PF01011; PQQ enzyme repeat; E=0.047; serine/threonine protein kinase related protein 6288092..6290338 Rhodopirellula baltica SH 1 1795650 NP_870089.1 CDS RB11662 NC_005027.1 6290362 6290469 D hypothetical protein 6290362..6290469 Rhodopirellula baltica SH 1 1790891 NP_870090.1 CDS RB11663 NC_005027.1 6290653 6292005 D PMID: 9294455 best DB hits: BLAST: embl:CAB61680.1; (AL133213) transmembrane transport; E=6e-11 pir:T47026; hypothetical protein [imported] - Yersinia pestis; E=4e-08 swissprot:P46333; CSBC_BACSU PROBABLE METABOLITE TRANSPORT PROTEIN; E=2e-07 COG: BS_yxcC; COG0477 Permeases of the major facilitator superfamily; E=2e-08 PFAM: PF00083; Sugar (and other) transporter; E=2.7e-13; transmembrane transport protein 6290653..6292005 Rhodopirellula baltica SH 1 1790235 NP_870091.1 CDS RB11664 NC_005027.1 6292018 6292128 D hypothetical protein 6292018..6292128 Rhodopirellula baltica SH 1 1793852 NP_870092.1 CDS RB11665 NC_005027.1 6292134 6292613 R hypothetical protein complement(6292134..6292613) Rhodopirellula baltica SH 1 1792522 NP_870093.1 CDS RB11667 NC_005027.1 6292707 6293231 R hypothetical protein complement(6292707..6293231) Rhodopirellula baltica SH 1 1796905 NP_870094.1 CDS RB11668 NC_005027.1 6293213 6294166 D PMID: 3595559 best DB hits: BLAST: gb:AAF13178.1; AF181079_1 (AF181079) sensor kinase homolog; E=2e-28 pir:D83491; probable sensorresponse regulator hybrid PA1243; E=4e-28 gb:AAG00949.1; AF273679_3 (AF273679) FixL [Rhizobium etli]; E=3e-27 COG: PA1243; COG0642 Sensory transduction histidine kinases; E=4e-29 PFAM: PF00512; His Kinase A (phosphoacceptor) doma; E=5.2e-12 PF02518; Histidine kinase-, DNA gyrase B-, p; E=3.1e-28; sensor kinase-like protein 6293213..6294166 Rhodopirellula baltica SH 1 1792946 NP_870095.1 CDS atoC NC_005027.1 6294163 6295608 D PMID: 8346225 best DB hits: BLAST: swissprot:Q06065; ATOC_ECOLI ACETOACETATE METABOLISM REGULATORY; E=5e-91 swissprot:P03029; NTRC_KLEPN NITROGEN ASSIMILATION REGULATORY; E=4e-90 embl:CAA26473.1; (X02617) pot. ntrC gene product (aa 1-469); E=8e-90 COG: atoC; COG2204 AAA superfamily ATPases with N-terminal receiver; E=4e-92 PFAM: PF00072; Response regulator receiver doma; E=2.3e-29 PF00158; Sigma-54 interaction domain; E=5.1e-128; cetoacetate metabolism regulatory protein atoC 6294163..6295608 Rhodopirellula baltica SH 1 1793968 NP_870096.1 CDS RB11670 NC_005027.1 6295656 6296792 D PMID: 2974033 best DB hits: BLAST: pir:A75265; ferric enterobactin esterase-related protein -; E=0.002 COG: DR2506; COG2382 Enterochelin esterase and related enzymes; E=2e-04; ferric enterobactin esterase-related protein FeS 6295656..6296792 Rhodopirellula baltica SH 1 1795926 NP_870097.1 CDS RB11671 NC_005027.1 6296756 6296929 D hypothetical protein 6296756..6296929 Rhodopirellula baltica SH 1 1790395 NP_870098.1 CDS RB11672 NC_005027.1 6297076 6297429 D hypothetical protein 6297076..6297429 Rhodopirellula baltica SH 1 1792070 NP_870099.1 CDS lepA NC_005027.1 6297457 6299253 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(6297457..6299253) Rhodopirellula baltica SH 1 1793327 NP_870100.1 CDS RB11674 NC_005027.1 6299390 6300109 D hypothetical protein 6299390..6300109 Rhodopirellula baltica SH 1 1795881 NP_870101.1 CDS RB11675 NC_005027.1 6299494 6300012 D signal peptide 6299494..6300012 Rhodopirellula baltica SH 1 1794064 NP_870102.1 CDS RB11676 NC_005027.1 6299509 6300075 R hypothetical protein complement(6299509..6300075) Rhodopirellula baltica SH 1 1791733 NP_870103.1 CDS RB11677 NC_005027.1 6300078 6300221 R hypothetical protein complement(6300078..6300221) Rhodopirellula baltica SH 1 1790288 NP_870104.1 CDS RB11678 NC_005027.1 6300187 6300366 D hypothetical protein 6300187..6300366 Rhodopirellula baltica SH 1 1794237 NP_870105.1 CDS RB11679 NC_005027.1 6300368 6300523 D hypothetical protein 6300368..6300523 Rhodopirellula baltica SH 1 1789923 NP_870106.1 CDS RB11680 NC_005027.1 6300456 6300635 R hypothetical protein complement(6300456..6300635) Rhodopirellula baltica SH 1 1790402 NP_870107.1 CDS RB11681 NC_005027.1 6300601 6300780 D hypothetical protein 6300601..6300780 Rhodopirellula baltica SH 1 1790941 NP_870108.1 CDS RB11682 NC_005027.1 6300763 6300903 R hypothetical protein complement(6300763..6300903) Rhodopirellula baltica SH 1 1795855 NP_870109.1 CDS RB11683 NC_005027.1 6300897 6301049 R hypothetical protein complement(6300897..6301049) Rhodopirellula baltica SH 1 1792536 NP_870110.1 CDS RB11685 NC_005027.1 6301077 6301256 R hypothetical protein complement(6301077..6301256) Rhodopirellula baltica SH 1 1792456 NP_870111.1 CDS RB11686 NC_005027.1 6301222 6301401 D hypothetical protein 6301222..6301401 Rhodopirellula baltica SH 1 1791362 NP_870112.1 CDS RB11687 NC_005027.1 6301412 6301528 D hypothetical protein 6301412..6301528 Rhodopirellula baltica SH 1 1796812 NP_870113.1 CDS kdtA NC_005027.1 6301529 6302842 R PMID: 2033061 PMID: 1447141 best DB hits: BLAST: gb:AAC16417.1; (AF026386) WaaA [Salmonella typhimurium]; E=4e-53 gb:AAC69691.1; (AF019747) Kdo transferase WaaA [Escherichia coli]; E=9e-52 swissprot:P23282; KDTA_ECOLI 3-DEOXY-D-MANNO-OCTULOSONIC-ACID; E=1e-51 COG: kdtA; COG1519 3-Deoxy-D-manno-octulosonic-acid transferase; E=9e-53; 3-deoxy-D-manno-octulosonic-acid transferase complement(6301529..6302842) Rhodopirellula baltica SH 1 1795675 NP_870114.1 CDS SecA NC_005027.1 6302988 6306704 R functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA complement(6302988..6306704) Rhodopirellula baltica SH 1 1790695 NP_870115.1 CDS RB11693 NC_005027.1 6306775 6307680 R PMID: 10653753 best DB hits: BLAST: embl:CAB72937.1; (AJ243321) hypothetical protein [Lactobacillus; E=7e-27 embl:CAB88179.1; (AL352972) hypothetical protein SCC30.09c; E=1e-25 gb:AAF45006.1; AE003406_211 (AE003416) symbol=anon-35F36A; E=5e-23 COG: Cj0705; COG0327 Uncharacterized ACR; E=2e-16 PFAM: PF01784; Domain of unknown function DUF34; E=8.3e-47; hypothetical protein complement(6306775..6307680) Rhodopirellula baltica SH 1 1794281 NP_870116.1 CDS RB11698 NC_005027.1 6307780 6308550 R PMID: 8905231 best DB hits: BLAST: swissprot:Q04737; Y751_SYNY3 HYPOTHETICAL 27.8 KD PROTEIN SLR0751; E=0.29 ddbj:BAA76764.1; (AB023137) KIAA0920 protein [Homo sapiens]; E=0.73; hypothetical protein complement(6307780..6308550) Rhodopirellula baltica SH 1 1793748 NP_870117.1 CDS RB11701 NC_005027.1 6308278 6310983 D TPR repeat-containing protein 6308278..6310983 Rhodopirellula baltica SH 1 1790339 NP_870118.1 CDS RB11703 NC_005027.1 6311093 6311251 D hypothetical protein 6311093..6311251 Rhodopirellula baltica SH 1 1792500 NP_870119.1 CDS RB11704 NC_005027.1 6311224 6311406 D hypothetical protein 6311224..6311406 Rhodopirellula baltica SH 1 1794144 NP_870120.1 CDS RB11706 NC_005027.1 6311407 6312933 D PMID: 3057437 best DB hits: BLAST: pir:F72359; periplasmic serine proteinase Do (EC 3.4.21.-) -; E=9e-41 pir:F81329; serine proteinase (proteinase DO) (EC 3.4.21.-) Cj1228c; E=2e-40 embl:CAA57948.1; (X82628) serine protease [Campylobacter jejuni]; E=2e-40 COG: TM0571; COG0265 Trypsin-like serine proteases, typically; E=8e-42 CT823; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=2e-40 PA0766; COG0265 Trypsin-like serine proteases, typically; E=5e-40 PFAM: PF00089; Trypsin; E=3.8e-20 PF00595; PDZ domain (Also known as DHR or GLG; E=4.9e-06; periplasmic serine proteinase Do 6311407..6312933 Rhodopirellula baltica SH 1 1791688 NP_870121.1 CDS RB11707 NC_005027.1 6312937 6313188 D hypothetical protein 6312937..6313188 Rhodopirellula baltica SH 1 1795218 NP_870122.1 CDS RB11708 NC_005027.1 6313240 6313833 D PMID: 10360571 best DB hits: BLAST: pir:C72318; hypothetical protein - Thermotoga maritima (strain MSB8); E=7e-04; hypothetical protein 6313240..6313833 Rhodopirellula baltica SH 1 1796832 NP_870123.1 CDS RB11712 NC_005027.1 6313833 6315776 D PMID: 7908117 best DB hits: BLAST: pir:C72027; swisnf family helicase_2 - Chlamydophila pneumoniae; E=1e-50 gb:AAC71234.1; (U39681) ATP-dependent RNA helicase, ; E=4e-50 ddbj:BAA99057.1; (AP002548) SWISNF family helicase_2; E=5e-50 COG: CPn0849; COG0553 Superfamily II DNA/RNA helicases, SNF2 family; E=1e-51 PFAM: PF01102; Glycophorin A; E=0.41 PF00176; SNF2 and others N-terminal doma; E=6.4e-34 PF00271; Helicase conserved C-terminal d; E=1e-17; SWF/SNF family helicase 6313833..6315776 Rhodopirellula baltica SH 1 1795489 NP_870124.1 CDS RB11716 NC_005027.1 6315714 6315938 R hypothetical protein complement(6315714..6315938) Rhodopirellula baltica SH 1 1790690 NP_870125.1 CDS RB11718 NC_005027.1 6315877 6316194 R hypothetical protein complement(6315877..6316194) Rhodopirellula baltica SH 1 1792470 NP_870126.1 CDS RB11720 NC_005027.1 6316234 6317028 D hypothetical protein 6316234..6317028 Rhodopirellula baltica SH 1 1794159 NP_870127.1 CDS RB11722 NC_005027.1 6317037 6318065 D PMID: 9734811 PMID: 95299934 PMID: 9262406 best DB hits: BLAST: ddbj:BAA31647.1; (AB014572) KIAA0672 protein [Homo sapiens]; E=0.007 pir:T12533; hypothetical protein DKFZp434B034.1 - human (fragment); E=0.010; hypothetical protein 6317037..6318065 Rhodopirellula baltica SH 1 1794875 NP_870128.1 CDS RB11726 NC_005027.1 6318144 6318821 D hypothetical protein 6318144..6318821 Rhodopirellula baltica SH 1 1795659 NP_870129.1 CDS RB11728 NC_005027.1 6318857 6319744 D PMID: 8905231 PMID: 10561547 best DB hits: BLAST: swissprot:P73599; YD04_SYNY3 HYPOTHETICAL 32.8 KDA PROTEIN SLL1304; E=1e-25 swissprot:O50580; DT3E_PSECI D-TAGATOSE 3-EPIMERASE -----; E=2e-25 swissprot:Q9WYP7; Y416_THEMA HYPOTHETICAL PROTEIN TM0416 -----; E=3e-14 COG: sll1304; COG1082 Predicted endonucleases; E=1e-26; tagatose 3-epimerase 6318857..6319744 Rhodopirellula baltica SH 1 1790294 NP_870130.1 CDS RB11729 NC_005027.1 6319752 6320009 R hypothetical protein complement(6319752..6320009) Rhodopirellula baltica SH 1 1790785 NP_870131.1 CDS RB11730 NC_005027.1 6320023 6320817 D PMID: 10984043 best DB hits: BLAST: pir:F83604; hypothetical protein PA0339 [imported] - Pseudomonas; E=1e-10 ddbj:BAB05446.1; (AP001512) BH1727~unknown conserved protein in; E=5e-08 swissprot:P54797; T10_MOUSE SERTHR-RICH PROTEIN T10 IN DGCR; E=6e-07 COG: PA0339; COG3332 Uncharacterized ACR; E=1e-11; hypothetical protein 6320023..6320817 Rhodopirellula baltica SH 1 1793357 NP_870132.1 CDS RB11731 NC_005027.1 6320896 6321063 R hypothetical protein complement(6320896..6321063) Rhodopirellula baltica SH 1 1790425 NP_870133.1 CDS RB11732 NC_005027.1 6321170 6321625 R hypothetical protein complement(6321170..6321625) Rhodopirellula baltica SH 1 1792475 NP_870134.1 CDS RB11736 NC_005027.1 6321668 6322957 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein 6321668..6322957 Rhodopirellula baltica SH 1 1794640 NP_870135.1 CDS RB11738 NC_005027.1 6322967 6323086 R hypothetical protein complement(6322967..6323086) Rhodopirellula baltica SH 1 1790264 NP_870136.1 CDS RB11739 NC_005027.1 6323080 6323274 D hypothetical protein 6323080..6323274 Rhodopirellula baltica SH 1 1794234 NP_870137.1 CDS RB11742 NC_005027.1 6323302 6326160 D best DB hits: PFAM: PF02030; Hypothetical mycoplasma lipopro; E=0.82; signal peptide 6323302..6326160 Rhodopirellula baltica SH 1 1793463 NP_870138.1 CDS RB11746 NC_005027.1 6326162 6327673 D sulfatase 6326162..6327673 Rhodopirellula baltica SH 1 1794318 NP_870139.1 CDS RB11748 NC_005027.1 6327844 6328017 D hypothetical protein 6327844..6328017 Rhodopirellula baltica SH 1 1790366 NP_870140.1 CDS RB11749 NC_005027.1 6328064 6328354 D PMID: 2824781 best DB hits: BLAST: gb:AAG58100.1; AE005527_3 (AE005527) unknown protein encoded by; E=0.002 gb:AAG53987.1; AF327445_1 (AF327445) transposase A; E=0.003 gb:AAF28119.1; AF153317_15 (AF153317) InsA [Shigella; E=0.007 COG: PA1937; COG2963 Transposase; E=0.004 PFAM: PF01381; Helix-turn-helix; E=0.53 PF01527; Transposase; E=6.1e-18; transposase A 6328064..6328354 Rhodopirellula baltica SH 1 1794282 NP_870141.1 CDS RB11750 NC_005027.1 6328357 6329235 D PMID: 1482189 PMID: 11337471 PMID: 1482192 best DB hits: BLAST: gb:AAA88919.1; (U13013) ORFB [Leptospira interrogans]; E=3e-47 gb:AAA88916.1; (U13012) ORFB [Leptospira interrogans]; E=1e-46 gb:AAC05649.1; (AF038931) probable transposase-related protein; E=1e-45 COG: DRB0019.2; COG2801 transposase; E=1e-35 PFAM: PF00665; Integrase core domain; E=4.8e-40; transposase 6328357..6329235 Rhodopirellula baltica SH 1 1794205 NP_870142.1 CDS RB11751 NC_005027.1 6329316 6329819 D hypothetical protein 6329316..6329819 Rhodopirellula baltica SH 1 1792176 NP_870143.1 CDS RB11752 NC_005027.1 6329394 6329918 R hypothetical protein complement(6329394..6329918) Rhodopirellula baltica SH 1 1791352 NP_870144.1 CDS rrmA NC_005027.1 6329915 6330736 R PMID: 9440525 best DB hits: BLAST: swissprot:P36999; RRMA_ECOLI RIBOSOMAL RNA LARGE SUBUNIT; E=2e-21 gb:AAG56811.1; AE005405_2 (AE005405) enzyme [Escherichia; E=1e-20 pir:F83500; rRNA methyltransferase PA1161 [imported] - Pseudomonas; E=4e-20 COG: rrmA; COG0500 SAM-dependent methyltransferases; E=2e-22; ribosomal RNA large subunit methyltransferase A complement(6329915..6330736) Rhodopirellula baltica SH 1 1792724 NP_870145.1 CDS RB11757 NC_005027.1 6330717 6330992 D hypothetical protein 6330717..6330992 Rhodopirellula baltica SH 1 1792477 NP_870146.1 CDS RB11758 NC_005027.1 6330939 6331238 R hypothetical protein complement(6330939..6331238) Rhodopirellula baltica SH 1 1793552 NP_870147.1 CDS RB11759 NC_005027.1 6331315 6331512 R hypothetical protein complement(6331315..6331512) Rhodopirellula baltica SH 1 1793424 NP_870148.1 CDS RB11760 NC_005027.1 6331527 6331922 D hypothetical protein 6331527..6331922 Rhodopirellula baltica SH 1 1790985 NP_870149.1 CDS strI NC_005027.1 6331874 6333352 R PMID: 1654502 best DB hits: BLAST: swissprot:P09400; STRI_STRGR STREPTOMYCIN BIOSYNTHESIS PROTEIN; E=7e-09 ddbj:BAB05939.1; (AP001514) dehydrogenase [Bacillus halodurans]; E=5e-06 swissprot:P40332; YISS_BACSU HYPOTHETICAL 37.5 KD PROTEIN IN; E=0.014 COG: BH2220; COG0673 Predicted dehydrogenases and related proteins; E=4e-07 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=1.4e-05; streptomycin biosynthesis protein strI complement(6331874..6333352) Rhodopirellula baltica SH 1 1792996 NP_870150.1 CDS RB11765 NC_005027.1 6333558 6334091 D hypothetical protein 6333558..6334091 Rhodopirellula baltica SH 1 1794552 NP_870151.1 CDS RB11766 NC_005027.1 6334355 6334744 D hypothetical protein 6334355..6334744 Rhodopirellula baltica SH 1 1792839 NP_870152.1 CDS RB11767 NC_005027.1 6334763 6334939 D hypothetical protein 6334763..6334939 Rhodopirellula baltica SH 1 1792581 NP_870153.1 CDS RB11768 NC_005027.1 6334808 6334939 D hypothetical protein 6334808..6334939 Rhodopirellula baltica SH 1 1789991 NP_870154.1 CDS RB11769 NC_005027.1 6335006 6359527 D PMID: 98010624 best DB hits: BLAST: pir:T08615; aggregation factor core protein MAFp3, isoform C -; E=1e-12 pir:T08617; aggregation factor core protein MAFp3, isoform E -; E=4e-12 pir:T08614; aggregation factor core protein MAFp3, isoform B -; E=5e-08 PFAM: PF00028; Cadherin domain; E=1.6e-12; aggregation factor core protein MAFp3, isoform C 6335006..6359527 Rhodopirellula baltica SH 1 1791353 NP_870155.1 CDS RB11796 NC_005027.1 6359561 6360256 D signal peptide 6359561..6360256 Rhodopirellula baltica SH 1 1795929 NP_870156.1 CDS RB11798 NC_005027.1 6360319 6360450 D hypothetical protein 6360319..6360450 Rhodopirellula baltica SH 1 1794954 NP_870157.1 CDS RB11799 NC_005027.1 6360641 6361474 D PMID: 9739094 PMID: 1625703 PMID: 10567266 best DB hits: BLAST: pir:B75578; zinc metalloendopeptidase, leishmanolysin family -; E=8e-12 gb:AAB97895.1; (AF037165) major surface glycoprotein [Leishmania; E=0.007 gb:AAB97896.1; (AF037166) major surface glycoprotein [Leishmania; E=0.007 PFAM: PF01457; Leishmanolysin; E=0.063; zinc metalloendopeptidase 6360641..6361474 Rhodopirellula baltica SH 1 1795346 NP_870158.1 CDS RB11801 NC_005027.1 6361471 6361782 D hypothetical protein 6361471..6361782 Rhodopirellula baltica SH 1 1794292 NP_870159.1 CDS RB11802 NC_005027.1 6361950 6362240 D PMID: 2824781 best DB hits: BLAST: gb:AAG58100.1; AE005527_3 (AE005527) unknown protein encoded by; E=0.002 gb:AAG53987.1; AF327445_1 (AF327445) transposase A; E=0.003 gb:AAF28119.1; AF153317_15 (AF153317) InsA [Shigella; E=0.007 COG: PA1937; COG2963 Transposase; E=0.004 PFAM: PF01381; Helix-turn-helix; E=0.53 PF01527; Transposase; E=6.1e-18; transposase A 6361950..6362240 Rhodopirellula baltica SH 1 1791105 NP_870160.1 CDS RB11803 NC_005027.1 6362243 6363121 D PMID: 1482189 PMID: 11337471 PMID: 1482192 best DB hits: BLAST: gb:AAA88919.1; (U13013) ORFB [Leptospira interrogans]; E=3e-47 gb:AAA88916.1; (U13012) ORFB [Leptospira interrogans]; E=1e-46 gb:AAC05649.1; (AF038931) probable transposase-related protein; E=1e-45 COG: DRB0019.2; COG2801 transposase; E=1e-35 PFAM: PF00665; Integrase core domain; E=4.8e-40; transposase 6362243..6363121 Rhodopirellula baltica SH 1 1796823 NP_870161.1 CDS RB11804 NC_005027.1 6363139 6363537 R hypothetical protein complement(6363139..6363537) Rhodopirellula baltica SH 1 1795893 NP_870162.1 CDS RB11805 NC_005027.1 6363530 6363715 R hypothetical protein complement(6363530..6363715) Rhodopirellula baltica SH 1 1792363 NP_870163.1 CDS RB11807 NC_005027.1 6363652 6364356 D signal peptide 6363652..6364356 Rhodopirellula baltica SH 1 1793916 NP_870164.1 CDS RB11810 NC_005027.1 6364437 6364685 R hypothetical protein complement(6364437..6364685) Rhodopirellula baltica SH 1 1793243 NP_870165.1 CDS RB11811 NC_005027.1 6364750 6365883 D PMID: 20365717 best DB hits: BLAST: pir:E83347; hypothetical protein PA2395 [imported] - Pseudomonas; E=2e-20 pir:E82768; conserved hypothetical protein XF0752 [imported] -; E=5e-20 pir:A82381; conserved hypothetical protein VCA1077 [imported] -; E=2e-14 COG: PA2395; COG1262 Uncharacterized BCR; E=2e-21; hypothetical protein 6364750..6365883 Rhodopirellula baltica SH 1 1793722 NP_870166.1 CDS RB11812 NC_005027.1 6365918 6366334 D hypothetical protein 6365918..6366334 Rhodopirellula baltica SH 1 1790439 NP_870167.1 CDS RB11813 NC_005027.1 6366331 6366573 D hypothetical protein 6366331..6366573 Rhodopirellula baltica SH 1 1796908 NP_870168.1 CDS RB11816 NC_005027.1 6366592 6366729 D hypothetical protein 6366592..6366729 Rhodopirellula baltica SH 1 1793617 NP_870169.1 CDS spoIIIE NC_005027.1 6366714 6369527 R PMID: 3129532 PMID: 2507870 PMID: 8160014 best DB hits: BLAST: swissprot:P21458; SP3E_BACSU STAGE III SPORULATION PROTEIN E; E=1e-108 pir:C69999; DNA translocase stage III sporulation homolog ytpT -; E=1e-106 swissprot:P45264; FTSK_HAEIN CELL DIVISION PROTEIN FTSK HOMOLOG; E=1e-105 COG: BS_spoIIIE; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related; E=1e-109 ftsK; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; E=6e-97 CT739; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related; E=6e-97 PFAM: PF01580; FtsK/SpoIIIE family; E=9.7e-66; stage III sporulation protein E complement(6366714..6369527) Rhodopirellula baltica SH 1 1791213 NP_870170.1 CDS guaB NC_005027.1 6369826 6371445 D PMID: 9537320 best DB hits: BLAST: swissprot:O67820; IMDH_AQUAE INOSINE-5'-MONOPHOSPHATE; E=1e-144 ddbj:BAB03739.1; (AP001507) inositol-monophosphate dehydrogenase; E=1e-140 pir:JC7305; IMP dehydrogenase (EC 1.1.1.205) - Bacillus cereus; E=1e-134 COG: Ta0219; COG0516 IMP dehydrogenase/GMP reductase; E=1e-112 PFAM: PF01574; IMP dehydrogenase / GMP reduc; E=4.3e-49 PF00571; CBS domain; E=2.5e-08 PF01070; FMN-dependent dehydrogenase; E=0.00039; inosine-5'-monophosphate dehydrogenase 6369826..6371445 Rhodopirellula baltica SH 1 1795246 NP_870171.1 CDS RB11823 NC_005027.1 6371378 6373282 D signal peptide 6371378..6373282 Rhodopirellula baltica SH 1 1791216 NP_870172.1 CDS RB11826 NC_005027.1 6373298 6373600 D hypothetical protein 6373298..6373600 Rhodopirellula baltica SH 1 1794561 NP_870173.1 CDS RB11827 NC_005027.1 6373669 6373818 D hypothetical protein 6373669..6373818 Rhodopirellula baltica SH 1 1791840 NP_870174.1 CDS RB11828 NC_005027.1 6373827 6375767 D best DB hits: BLAST: gb:AAF51529.1; (AE003590) CG18326 gene product [Drosophila; E=0.32; transmembrane protein 6373827..6375767 Rhodopirellula baltica SH 1 1794042 NP_870175.1 CDS RB11831 NC_005027.1 6375848 6376720 R hypothetical protein complement(6375848..6376720) Rhodopirellula baltica SH 1 1792262 NP_870176.1 CDS ndk NC_005027.1 6376760 6377218 R PMID: 9371463 PMID: 12001234 best DB hits: BLAST: gb:AAB90470.1; (AE001051) nucleoside diphosphate kinase (ndk); E=1e-36 swissprot:O26358; NDK_METTH NUCLEOSIDE DIPHOSPHATE KINASE (NDK); E=1e-35 pir:D75044; nucleoside diphosphate kinase (ndk) PAB1489 - Pyrococcus; E=2e-35 COG: AF0767; COG0105 Nucleoside diphosphate kinase; E=1e-37 PFAM: PF00334; Nucleoside diphosphate kinases; E=3.4e-61; nucleoside diphosphate kinase (NDK) complement(6376760..6377218) Rhodopirellula baltica SH 1 1796861 NP_870177.1 CDS RB11837 NC_005027.1 6377295 6377732 R signal peptide complement(6377295..6377732) Rhodopirellula baltica SH 1 1792882 NP_870178.1 CDS RB11839 NC_005027.1 6377722 6378222 R PMID: 10984043 best DB hits: BLAST: pir:A83254; hypothetical protein PA3130 [imported] - Pseudomonas; E=5e-08 swissprot:P77712; YBAW_ECOLI HYPOTHETICAL 15.1 KD PROTEIN IN; E=0.43 gb:AAG54793.1; AE005223_8 (AE005223) orf, hypothetical protein; E=0.46 COG: PA3130; COG0824 Predicted thioesterase; E=5e-09; hypothetical protein complement(6377722..6378222) Rhodopirellula baltica SH 1 1792306 NP_870179.1 CDS RB11843 NC_005027.1 6378311 6378565 R best DB hits: BLAST: pir:T16283; hypothetical protein F35H10.10 - Caenorhabditis elegans; E=0.58 gb:AAB51198.1; (U70870) CELF35-1 [Caenorhabditis elegans]; E=0.58; hypothetical protein complement(6378311..6378565) Rhodopirellula baltica SH 1 1793440 NP_870180.1 CDS RB11844 NC_005027.1 6378510 6378794 D hypothetical protein 6378510..6378794 Rhodopirellula baltica SH 1 1794216 NP_870181.1 CDS RB11845 NC_005027.1 6378812 6379072 R hypothetical protein complement(6378812..6379072) Rhodopirellula baltica SH 1 1790183 NP_870182.1 CDS RB11846 NC_005027.1 6379060 6379323 R hypothetical protein complement(6379060..6379323) Rhodopirellula baltica SH 1 1794705 NP_870183.1 CDS msrA NC_005027.1 6379337 6380068 D PMID: 10567266 best DB hits: BLAST: swissprot:Q9RTB6; MSRA_DEIRA PEPTIDE METHIONINE SULFOXIDE; E=3e-53 embl:CAC23591.1; (AL512971) peptide methionine sulfoxide; E=3e-45 gb:AAG19555.1; (AE005045) peptide methionine sulfoxide reductase; E=5e-43 COG: DR1849; COG0225 Peptide methionine sulfoxide reductase; E=3e-54 PFAM: PF01625; Peptide methionine sulfoxide reducta; E=5.8e-84; peptide methionine sulfoxide reductase 6379337..6380068 Rhodopirellula baltica SH 1 1794193 NP_870184.1 CDS RB11848 NC_005027.1 6380126 6381418 D hypothetical protein 6380126..6381418 Rhodopirellula baltica SH 1 1793742 NP_870185.1 CDS hofF NC_005027.1 6381415 6382455 D PMID: 1640836 PMID: 93174466 best DB hits: BLAST: gb:AAC70103.1; (AF074613) type II secretion protein [Escherichia; E=3e-15 pir:C82327; MSHA biogenesis protein MshG VC0406 [imported] - Vibrio; E=9e-15 gb:AAA96018.1; (U35009) MshG [Vibrio cholerae]; E=3e-13 COG: VC0406; COG1459 General secretory pathway protein F; E=8e-16 PFAM: PF00482; Bacterial type II secretion system p; E=3.4e-05; general secretion pathway protein F 6381415..6382455 Rhodopirellula baltica SH 1 1795328 NP_870186.1 CDS folE NC_005027.1 6382501 6383190 D PMID: 1551827 PMID: 95352066 best DB hits: BLAST: swissprot:P19465; GCH1_BACSU GTP CYCLOHYDROLASE I (GTP-CH-I); E=1e-59 ddbj:BAB05365.1; (AP001512) GTP cyclohydrolase I [Bacillus; E=1e-57 swissprot:O06273; GCH1_MYCTU GTP CYCLOHYDROLASE I (GTP-CH-I); E=4e-53 COG: BS_mtrA; COG0302 GTP cyclohydrolase I; E=1e-60 PFAM: PF01227; GTP cyclohydrolase I; E=2.3e-110; GTP cyclohydrolase I 6382501..6383190 Rhodopirellula baltica SH 1 1793560 NP_870187.1 CDS RB11854 NC_005027.1 6383171 6383404 R hypothetical protein complement(6383171..6383404) Rhodopirellula baltica SH 1 1795488 NP_870188.1 CDS RB11855 NC_005027.1 6383460 6383765 R hypothetical protein complement(6383460..6383765) Rhodopirellula baltica SH 1 1794354 NP_870189.1 CDS RB11856 NC_005027.1 6383865 6385799 R PMID: 7934828 best DB hits: BLAST: swissprot:P39599; YWCA_BACSU HYPOTHETICAL 55.0 KD PROTEIN IN; E=3e-34 pir:F83241; probable sodium:solute symporter PA3234 [imported] -; E=1e-33 gb:AAK01502.1; (AF241171) amino acid transport protein; E=3e-32 COG: BS_ywcA; COG0591 Na+/proline, Na+/panthothenate symporters and; E=3e-35 yjcG; COG0591 Na+/proline, Na+/panthothenate symporters and related; E=7e-33 XF2251; COG0591 Na+/proline, Na+/panthothenate symporters and; E=2e-30 PFAM: PF00474; Sodium:solute symporter famil; E=3.8e-37; symporter ywcA complement(6383865..6385799) Rhodopirellula baltica SH 1 1791577 NP_870190.1 CDS RB11857 NC_005027.1 6385796 6386101 R hypothetical protein complement(6385796..6386101) Rhodopirellula baltica SH 1 1793470 NP_870191.1 CDS phnP NC_005027.1 6386309 6387160 R PMID: 9403685 PMID: 1840580 best DB hits: BLAST: pir:D70166; phnP protein (phnP) homolog - Lyme disease spirochete; E=3e-47 pir:E71649; hypothetical protein RP869 - Rickettsia prowazekii; E=2e-35 ddbj:BAB02903.1; (AB028610) hydrolase-like protein [Arabidopsis; E=1e-31 COG: BB0533; COG1235 Metal-dependent hydrolases of the beta-lactamase; E=2e-48 PFAM: PF00753; Metallo-beta-lactamase superfamil; E=1.1e-06; phnP protein homolog- hydrolase complement(6386309..6387160) Rhodopirellula baltica SH 1 1790858 NP_870192.1 CDS RB11862 NC_005027.1 6387157 6387327 R hypothetical protein complement(6387157..6387327) Rhodopirellula baltica SH 1 1791271 NP_870193.1 CDS recA NC_005027.1 6387411 6388538 R catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A complement(6387411..6388538) Rhodopirellula baltica SH 1 1794458 NP_870194.1 CDS RB11867 NC_005027.1 6388765 6388905 D hypothetical protein 6388765..6388905 Rhodopirellula baltica SH 1 1791597 NP_870195.1 CDS RB11868 NC_005027.1 6388940 6389680 R hypothetical protein complement(6388940..6389680) Rhodopirellula baltica SH 1 1796841 NP_870196.1 CDS RB11869 NC_005027.1 6389743 6389886 R hypothetical protein complement(6389743..6389886) Rhodopirellula baltica SH 1 1793496 NP_870197.1 CDS RB11870 NC_005027.1 6389978 6391042 D PMID: 10984043 best DB hits: BLAST: pir:F83601; hypothetical protein PA0356 [imported] - Pseudomonas; E=3e-15 pir:H82508; conserved hypothetical protein VCA0034 [imported] -; E=3e-11 pir:G72324; hypothetical protein - Thermotoga maritima (strain MSB8); E=1e-10 COG: PA0356; COG1639 Uncharacterized BCR; E=3e-16; hypothetical protein 6389978..6391042 Rhodopirellula baltica SH 1 1793437 NP_870198.1 CDS RB11875 NC_005027.1 6391049 6392338 D hypothetical protein 6391049..6392338 Rhodopirellula baltica SH 1 1790127 NP_870199.1 CDS dsbB NC_005027.1 6392375 6395116 D PMID: 7628442 PMID: 7542800 best DB hits: BLAST: pir:H72034; thiol-disulfide interchange protein dsbD [imported] -; E=7e-48 pir:G81503; thiol-disulfide interchange protein DSbD homolog CP1086; E=7e-48 pir:C81653; probable thiol-disulfide interchange protein dsbD; E=8e-47 COG: CPn0786; COG0526 Thiol-disulfide isomerase and thioredoxins; E=6e-49 BH1194; COG0785 Cytochrome c biogenesis protein; E=0.002; thiol:disulfide interchange protein DsbD 6392375..6395116 Rhodopirellula baltica SH 1 1792519 NP_870200.1 CDS trmE NC_005027.1 6395113 6396510 D in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 6395113..6396510 Rhodopirellula baltica SH 1 1796906 NP_870201.1 CDS msrA NC_005027.1 6396598 6397104 D this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 6396598..6397104 Rhodopirellula baltica SH 1 1790982 NP_870202.1 CDS RB11879 NC_005027.1 6397196 6398572 R PMID: 3057437 PMID: 10761919 best DB hits: BLAST: pir:B81914; probable periplasmic serine proteinase (EC 3.4.21.-); E=2e-47 gb:AAK01318.1; (AF190580) MucD [Pseudomonas syringae pv.; E=8e-47 pir:F83550; serine proteinase MucD precursor PA0766 [imported] -; E=1e-46 COG: NMB0532; COG0265 Trypsin-like serine proteases, typically; E=6e-48 RP124; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=7e-45 CPn0979; COG0265 Trypsin-like serine proteases, typically; E=3e-44 PFAM: PF00089; Trypsin; E=1.9e-16 PF00595; PDZ domain (Also known as DHR or GL; E=3.1e-09; periplasmic serine proteinase complement(6397196..6398572) Rhodopirellula baltica SH 1 1790253 NP_870203.1 CDS cdd NC_005027.1 6398667 6399167 D PMID: 2526291 PMID: 8969508 PMID: 9384377 best DB hits: BLAST: pir:PC1224; cytidine deaminase (EC 3.5.4.5) - human (fragment); E=3e-25 gb:AAD15828.1; (AF061658) cytidine deaminase [Homo sapiens]; E=3e-25 embl:CAB51906.1; (AJ237978) cytidine deaminase [Bacillus; E=6e-25 COG: BS_cdd; COG0295 Cytidine deaminase; E=8e-26 PFAM: PF00383; Cytidine and deoxycytidylate de; E=1.3e-23; cytidine deaminase 6398667..6399167 Rhodopirellula baltica SH 1 1792509 NP_870204.1 CDS RB11884 NC_005027.1 6399411 6400817 R hypothetical protein complement(6399411..6400817) Rhodopirellula baltica SH 1 1794054 NP_870205.1 CDS RB11886 NC_005027.1 6400881 6403682 R signal peptide complement(6400881..6403682) Rhodopirellula baltica SH 1 1791268 NP_870206.1 CDS RB11891 NC_005027.1 6403762 6405420 R PMID: 10984043 best DB hits: BLAST: pir:G83561; hypothetical protein PA0670 [imported] - Pseudomonas; E=4e-07; hypothetical protein complement(6403762..6405420) Rhodopirellula baltica SH 1 1793191 NP_870207.1 CDS RB11894 NC_005027.1 6405719 6407104 R PMID: 10984043 best DB hits: BLAST: pir:H83561; hypothetical protein PA0671 [imported] - Pseudomonas; E=5e-05; hypothetical protein complement(6405719..6407104) Rhodopirellula baltica SH 1 1792960 NP_870208.1 CDS RB11897 NC_005027.1 6407046 6407807 D hypothetical protein 6407046..6407807 Rhodopirellula baltica SH 1 1794300 NP_870209.1 CDS RB11898 NC_005027.1 6407203 6407562 D PMID: 11679669 best DB hits: PFAM: PF02370; M protein repeat; E=0.41; hypothetical protein 6407203..6407562 Rhodopirellula baltica SH 1 1796865 NP_870210.1 CDS RB11900 NC_005027.1 6407547 6407867 R hypothetical protein complement(6407547..6407867) Rhodopirellula baltica SH 1 1790086 NP_870211.1 CDS RB11902 NC_005027.1 6407792 6408118 D best DB hits: BLAST: swissprot:P49453; CENC_SHEEP CENTROMERE PROTEIN C (CENP-C); E=0.84; hypothetical protein 6407792..6408118 Rhodopirellula baltica SH 1 1795544 NP_870212.1 CDS RB11904 NC_005027.1 6408267 6409175 D hypothetical protein 6408267..6409175 Rhodopirellula baltica SH 1 1793006 NP_870213.1 CDS RB11906 NC_005027.1 6409273 6409737 D PMID: 11078650 best DB hits: BLAST: gb:AAF64052.1; AF242367_1 (AF242367) hypothetical; E=1e-10 embl:CAA63806.1; (X93605) hypothetical protein [Zymomonas; E=4e-08 pir:D72219; conserved hypothetical protein - Thermotoga maritima; E=5e-07 COG: TM1720; COG0454 Histone acetyltransferase HPA2 and related; E=4e-08 PFAM: PF00583; Acetyltransferase (GNAT) family; E=4.9e-11; acetyltransferase 6409273..6409737 Rhodopirellula baltica SH 1 1795395 NP_870214.1 CDS RB11907 NC_005027.1 6409724 6410200 D best DB hits: BLAST: gb:AAF00629.1; AC009540_6 (AC009540) unknown protein [Arabidopsis; E=1e-04 gb:AAF61443.1; AF139187_1 (AF139187) root border cell-specific; E=5e-04 pir:E83098; hypothetical protein PA4388 [imported] - Pseudomonas; E=0.020 COG: PA4388; COG0748 Uncharacterized BCR; E=0.002; hypothetical protein 6409724..6410200 Rhodopirellula baltica SH 1 1796877 NP_870215.1 CDS RB11909 NC_005027.1 6410157 6410663 D best DB hits: PFAM: PF01330; RuvA N terminal domain; E=0.83; hypothetical protein 6410157..6410663 Rhodopirellula baltica SH 1 1795383 NP_870216.1 CDS moxR NC_005027.1 6410718 6411734 D PMID: 1657871 PMID: 10086841 best DB hits: BLAST: pir:H72289; hypothetical protein TM1132 - Thermotoga maritima; E=5e-70 ddbj:BAB04323.1; (AP001509) methanol dehydrogenase regulatory; E=4e-69 pir:S75782; methanol dehydrogenase regulatory protein -; E=3e-67 COG: TM1132; COG0714 MoxR-like ATPases; E=5e-71 PFAM: PF00004; ATPase associated with va; E=0.00074 PF01506; Hepatitis C virus non-structural; E=0.69 PF01078; Magnesium chelatase, subunit Chl; E=8.1e-11; methanol dehydrogenase regulatory protein 6410718..6411734 Rhodopirellula baltica SH 1 1790166 NP_870217.1 CDS RB11914 NC_005027.1 6411706 6413076 D best DB hits: BLAST: pir:A75012; conserved hypothetical protein PAB1277 - Pyrococcus; E=2e-04 pir:S75346; hypothetical protein slr2013 - Synechocystis sp. (strain; E=0.001 pir:H71125; hypothetical protein PH0774 - Pyrococcus horikoshii; E=0.014 COG: PAB1277; COG1721 Uncharacterized ACR; E=2e-05 PFAM: PF01882; Protein of unknown function DUF58; E=2e-08; hypothetical protein 6411706..6413076 Rhodopirellula baltica SH 1 1793779 NP_870218.1 CDS RB11916 NC_005027.1 6413073 6415331 D PMID: 99009353 PMID: 10086841 best DB hits: BLAST: pir:F70464; hypothetical protein aq_1912 - Aquifex aeolicus -----; E=1e-13 ddbj:BAB04325.1; (AP001509) BH0606~unknown conserved protein; E=4e-10 pir:F83287; hypothetical protein PA2873 [imported] - Pseudomonas; E=3e-07 COG: aq_1912; COG1305 transglutaminases, cysteine; E=1e-14 PFAM: PF01841; Transglutaminase-like superfam; E=7e-11; protease 6413073..6415331 Rhodopirellula baltica SH 1 1792069 NP_870219.1 CDS RB11918 NC_005027.1 6415297 6415701 R best DB hits: BLAST: pir:E81162; conserved hypothetical protein NMB0742 [imported] -; E=0.034 pir:B81942; hypothetical protein NMA0955 [imported] - Neisseria; E=0.034 gb:AAG23848.1; (AF129396) unknown [Pseudomonas resinovorans]; E=0.11; hypothetical protein complement(6415297..6415701) Rhodopirellula baltica SH 1 1790729 NP_870220.1 CDS ilvD NC_005027.1 6415698 6417713 R PMID: 8325851 PMID: 7771772 best DB hits: BLAST: swissprot:P77596; YAGF_ECOLI HYPOTHETICAL 69.4 KD PROTEIN IN; E=0.0 swissprot:P39358; YJHG_ECOLI HYPOTHETICAL 70.0 KD PROTEIN IN; E=0.0 pir:S56522; hypothetical protein f655 - Escherichia coli -----; E=0.0 COG: yagF; COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; E=0.0 MJ1276; COG0129 Dihydroxyacid dehydratase/phosphogluconate; E=5e-48 ilvD; COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; E=2e-34 PFAM: PF00920; Dehydratase; E=3.6e-208; hypothetical protein complement(6415698..6417713) Rhodopirellula baltica SH 1 1796836 NP_870221.1 CDS RB11920 NC_005027.1 6417694 6418443 R PMID: 10086841 best DB hits: BLAST: ddbj:BAB04716.1; (AP001510) BH0997~unknown conserved protein; E=2e-44 ddbj:BAB05396.1; (AP001512) BH1677~unknown conserved protein; E=2e-41 pir:F70011; hypothetical protein yugP - Bacillus subtilis -----; E=8e-39 COG: BH0997; COG2738 Predicted Zn-dependent protease; E=2e-45; Zn-dependent protease complement(6417694..6418443) Rhodopirellula baltica SH 1 1790762 NP_870222.1 CDS RB11922 NC_005027.1 6418585 6419037 R PMID: 10086841 best DB hits: BLAST: ddbj:BAB06330.1; (AP001516) BH2611~unknown conserved protein; E=4e-08 pir:F69930; conserved hypothetical protein yozB - Bacillus subtilis; E=1e-07 swissprot:Q04453; YCT1_BACFI HYPOTHETICAL 21.0 KD PROTEIN IN CTAF; E=8e-07 COG: BH2611; COG2322 Predicted membrane protein; E=4e-09; hypothetical protein complement(6418585..6419037) Rhodopirellula baltica SH 1 1793199 NP_870223.1 CDS RB11923 NC_005027.1 6419041 6419736 R PMID: 1944230 PMID: 7592491 best DB hits: BLAST: ddbj:BAB07054.1; (AP001518) BH3335~unknown conserved protein; E=6e-19 swissprot:P54178; YPMQ_BACSU HYPOTHETICAL 21.6 KDA PROTEIN IN ILVA; E=1e-12 ddbj:BAB06623.1; (AP001517) BH2904~unknown conserved protein; E=2e-12 COG: BH3335; COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in; E=6e-20 BH2868; COG0526 Thiol-disulfide isomerase and thioredoxins; E=1e-04 DR1886; COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in; E=2e-04 PFAM: PF02630; SCO1/SenC; E=1.7e-14; hypothetical protein complement(6419041..6419736) Rhodopirellula baltica SH 1 1795392 NP_870224.1 CDS RB11925 NC_005027.1 6419855 6420085 D hypothetical protein 6419855..6420085 Rhodopirellula baltica SH 1 1792785 NP_870225.1 CDS RB11927 NC_005027.1 6420067 6421170 D PMID: 10567266 best DB hits: BLAST: pir:H70731; probable esterase - Mycobacterium tuberculosis (strain; E=2e-18 pir:B70961; probable esterase - Mycobacterium tuberculosis (strain; E=5e-18 pir:B75555; probable lipaseesterase - Deinococcus radiodurans; E=5e-16 COG: Rv2284; COG0657 Acetyl esterase; E=2e-19 APE2441; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; E=7e-05 BS_pnbA; COG2272 Carboxylesterase type B; E=1e-04; lipase/esterase 6420067..6421170 Rhodopirellula baltica SH 1 1794784 NP_870226.1 CDS RB11928 NC_005027.1 6421182 6422414 R hypothetical protein complement(6421182..6422414) Rhodopirellula baltica SH 1 1793481 NP_870227.1 CDS RB11929 NC_005027.1 6422447 6423328 R PMID: 9371463 PMID: 1924314 best DB hits: BLAST: pir:B69012; probable membrane protein MTH1092 - Methanobacterium; E=7e-22 gb:AAB89369.1; (AE000972) daunorubicin resistance membrane; E=5e-14 pir:D75108; daunorubicin resistance membrane protein (drrb) PAB1924; E=9e-14 COG: MTH1092; COG0842 Permease component of an ABC-transporter; E=6e-23; hypothetical protein complement(6422447..6423328) Rhodopirellula baltica SH 1 1790369 NP_870228.1 CDS RB11930 NC_005027.1 6423325 6424299 R PMID: 8843436 best DB hits: BLAST: embl:CAC08315.1; (AL392149) ABC transport system; E=7e-48 pir:C69012; ABC transporter (ATP-binding, daunorubicin resistance) -; E=7e-44 pir:S32908; hypothetical protein 4 - Streptomyces antibioticus; E=4e-43 COG: MTH1093; COG1131 ABC-type multidrug transport system, ATPase; E=7e-45 BH1054_2; COG0842 Permease component of an ABC-transporter; E=7e-34 ybhF; COG1131 ABC-type multidrug transport system, ATPase component; E=9e-34 PFAM: PF01078; Magnesium chelatase, subunit Ch; E=0.047 PF00005; ABC transporter; E=8.8e-55; ABC transporter ATP-binding protein complement(6423325..6424299) Rhodopirellula baltica SH 1 1795868 NP_870229.1 CDS cyoE NC_005027.1 6424310 6425479 R PMID: 8253713 PMID: 9537320 best DB hits: BLAST: gb:AAH00060.1; AAH00060 (BC000060) Unknown (protein for MGC:2077); E=9e-25 gb:AAF52915.1; (AE003628) CG5037 gene product [Drosophila; E=2e-24 gb:AAA21148.1; (U09466) heme A:farnesyltransferase [Homo sapiens]; E=4e-24 COG: YPL172c; COG0109 Polyprenyltransferase (cytochrome oxidase assembly; E=9e-23 VNG0666G_2; COG0109 Polyprenyltransferase (cytochrome oxidase; E=8e-11 AF2036; COG0109 Polyprenyltransferase (cytochrome oxidase assembly; E=4e-09 PFAM: PF01943; Polysaccharide biosynthesis pro; E=0.44 PF01040; UbiA prenyltransferase; E=1.5e-31; protoheme IX farnesyltransferase complement(6424310..6425479) Rhodopirellula baltica SH 1 1795491 NP_870230.1 CDS RB11934 NC_005027.1 6425493 6426563 R PMID: 8905231 best DB hits: BLAST: pir:S75621; hypothetical protein sll1898 - Synechocystis sp. (strain; E=7e-06 pir:D70314; heme O oxygenase - Aquifex aeolicus ----- gb:; E=0.14 COG: sll1898; COG1612 Uncharacterized protein required for cytochrome; E=7e-07 PFAM: PF02628; Cytochrome oxidase assembly protei; E=0.0068; hypothetical protein complement(6425493..6426563) Rhodopirellula baltica SH 1 1794223 NP_870231.1 CDS RB11936 NC_005027.1 6426560 6426736 R signal peptide complement(6426560..6426736) Rhodopirellula baltica SH 1 1790989 NP_870232.1 CDS pbrT NC_005027.1 6426733 6428166 R PMID: 21429239 best DB hits: BLAST: embl:CAC28871.1; (AJ278984) PbrT protein [Ralstonia; E=0.003 pir:B82990; hypothetical protein PA5248 [imported] - Pseudomonas; E=0.017 swissprot:Q04441; COX2_BACFI CYTOCHROME C OXIDASE POLYPEPTIDE II; E=0.74 COG: PA5248_1; COG2010 Cytochrome c, mono- and diheme variants; E=0.003 PFAM: PF00034; Cytochrome c; E=0.23; cytochrome c complement(6426733..6428166) Rhodopirellula baltica SH 1 1794160 NP_870233.1 CDS RB11938 NC_005027.1 6427959 6428474 R hypothetical protein complement(6427959..6428474) Rhodopirellula baltica SH 1 1796850 NP_870234.1 CDS RB11939 NC_005027.1 6428116 6428586 D hypothetical protein 6428116..6428586 Rhodopirellula baltica SH 1 1792815 NP_870235.1 CDS RB11941 NC_005027.1 6428692 6429975 R PMID: 8905231 best DB hits: BLAST: pir:A75561; conserved hypothetical protein - Deinococcus radiodurans; E=6e-16 embl:CAA66627.1; (X97985) ORF4 [Staphylococcus aureus]; E=1e-13 pir:S76793; hypothetical protein - Synechocystis sp. (strain PCC; E=3e-11 COG: DR0089; COG0463 Glycosyltransferases involved in cell wall; E=6e-17 MTH548; COG0784 CheY-like receiver domains; E=1e-06 PAB1246; COG1215 Glycosyltransferases, probably involved in cell; E=2e-06 PFAM: PF00535; Glycosyl transferase; E=3.5e-23; glycosyl transferase complement(6428692..6429975) Rhodopirellula baltica SH 1 1793189 NP_870236.1 CDS RB11942 NC_005027.1 6429924 6430775 R PMID: 7588751 best DB hits: BLAST: pir:S68196; hypothetical protein 9 - Myxococcus xanthus -----; E=5e-06 PFAM: PF01553; Acyltransferase; E=0.013; acyltransferase complement(6429924..6430775) Rhodopirellula baltica SH 1 1795915 NP_870237.1 CDS RB11943 NC_005027.1 6430772 6432376 R PMID: 7588751 PMID: 2263648 best DB hits: BLAST: swissprot:P54979; CRTJ_MYXXA PHYTOENE DEHYDROGENASE (PHYTOENE; E=2e-50 embl:CAA66626.1; (X97985) ORF3 [Staphylococcus aureus]; E=2e-48 pir:T31463; probable diapophytoene dehydrogenase crtN -; E=9e-47 COG: VNG1684G; COG1233 Phytoene dehydrogenase and related proteins; E=4e-41 PFAM: PF01266; D-amino acid oxidase; E=7.4e-05 PF01494; FAD binding domain; E=1.7e-06 PF02254; KTN NAD-binding domain; E=0.026; phytoene dehydrogenase complement(6430772..6432376) Rhodopirellula baltica SH 1 1793957 NP_870238.1 CDS RB11945 NC_005027.1 6432441 6434111 R PMID: 7934828 PMID: 9384377 PMID: 89229122 best DB hits: BLAST: pir:T03560; probable aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) -; E=1e-31 pir:D83600; probable aldehyde dehydrogenase PA0366 [imported] -; E=3e-31 gb:AAG20575.1; (AE005128) aldehyde dehydrogenase (retinol); AldY1; E=5e-31 COG: PA0366; COG1012 NAD-dependent aldehyde dehydrogenases; E=3e-32 PFAM: PF00171; Aldehyde dehydrogenase; E=2.5e-20; aldehyde dehydrogenase complement(6432441..6434111) Rhodopirellula baltica SH 1 1792360 NP_870239.1 CDS RB11946 NC_005027.1 6433969 6434574 D best DB hits: BLAST: ddbj:BAB13707.1; (AB040150) thermophilic NAD(P)H-flavin; E=2e-18 pir:B72384; bacterioferritin comigratory proteinNADH dehydrogenase; E=5e-08 swissprot:O26223; Y120_METTH NADH DEHYDROGENASENAD(P)H; E=0.003 COG: TM0386_2; COG0778 Nitroreductase; E=5e-09 PFAM: PF00881; Nitroreductase; E=3.3e-13; NAD(P)H-flavin oxidoreductase 6433969..6434574 Rhodopirellula baltica SH 1 1791765 NP_870240.1 CDS atoC NC_005027.1 6434543 6435730 D PMID: 9278503 PMID: 9097040 PMID: 8346225 best DB hits: BLAST: pir:F71315; probable response regulatory protein (atoC) - syphilis; E=1e-60 swissprot:P09570; NIFA_AZOVI NIF-SPECIFIC REGULATORY PROTEIN; E=2e-60 pir:A48291; ornithine decarboxylase inhibitor - Escherichia coli; E=3e-60 COG: TP0519; COG2204 AAA superfamily ATPases with N-terminal receiver; E=1e-61 aq_218_2; COG1221 NtrC family transcriptional regulators, ATPase; E=2e-59 hydG; COG2204 AAA superfamily ATPases with N-terminal receiver; E=9e-58 PFAM: PF00004; ATPase associated with variou; E=0.0057 PF00158; Sigma-54 interaction domain; E=6.7e-136; acetoacetate metabolism regulatory protein atoC 6434543..6435730 Rhodopirellula baltica SH 1 1794550 NP_870241.1 CDS RB11948 NC_005027.1 6435752 6437896 R PMID: 97000351 best DB hits: BLAST: ddbj:BAB21059.1; (AB037178) xanthan lyase [Bacillus sp. GL1]; E=2e-08 embl:CAB62685.1; (AL133422) membrane protein.; E=3e-08 embl:CAB62757.1; (AL133424) secreted protein; E=8e-08 PFAM: PF00070; Pyridine nucleotide-disulphide; E=0.00038; secreted protein- xanthan lyase related complement(6435752..6437896) Rhodopirellula baltica SH 1 1793428 NP_870242.1 CDS RB11951 NC_005027.1 6437923 6438510 D hypothetical protein 6437923..6438510 Rhodopirellula baltica SH 1 1792251 NP_870243.1 CDS RB11952 NC_005027.1 6438043 6438438 R signal peptide complement(6438043..6438438) Rhodopirellula baltica SH 1 1792476 NP_870244.1 CDS RB11955 NC_005027.1 6438513 6442016 R PMID: 11410353 PMID: 11856348 PMID: 8969512 PMID: 11234002 best DB hits: BLAST: pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=1e-44 swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=9e-44 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=1e-42 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=1e-45 PFAM: PF00069; Protein kinase domain; E=9.2e-49; serine/threonine-protein kinase pknB complement(6438513..6442016) Rhodopirellula baltica SH 1 1793020 NP_870245.1 CDS RB11958 NC_005027.1 6442110 6443018 R PMID: 10567266 best DB hits: BLAST: embl:CAB93400.1; (AL357524) conserved hypothetical protein; E=2e-41 pir:C75447; conserved hypothetical protein - Deinococcus radiodurans; E=2e-38 ddbj:BAB06408.1; (AP001516) BH2689~unknown conserved protein in; E=1e-29 COG: DR1011; COG2107 Predicted periplasmic solute-binding protein; E=1e-39 PFAM: PF02642; Uncharacterized ACR, COG2107; E=5.8e-43; hypothetical protein complement(6442110..6443018) Rhodopirellula baltica SH 1 1795311 NP_870246.1 CDS dapB NC_005027.1 6443097 6443939 R PMID: 8990304 PMID: 7893645 best DB hits: BLAST: swissprot:Q52419; DAPB_PSESZ DIHYDRODIPICOLINATE REDUCTASE (DHPR); E=7e-46 pir:C82080; dihydrodipicolinate reductase VC2391 [imported] - Vibrio; E=2e-44 swissprot:P38103; DAPB_PSEAE DIHYDRODIPICOLINATE REDUCTASE (DHPR); E=4e-43 COG: VC2391; COG0289 Dihydrodipicolinate reductase; E=2e-45 PFAM: PF01113; Dihydrodipicolinate reductase; E=2e-45; dihydrodipicolinate reductase complement(6443097..6443939) Rhodopirellula baltica SH 1 1792298 NP_870247.1 CDS RB11960 NC_005027.1 6443943 6444077 D hypothetical protein 6443943..6444077 Rhodopirellula baltica SH 1 1791889 NP_870248.1 CDS RB11961 NC_005027.1 6444074 6444778 D PMID: 10360571 PMID: 95286482 best DB hits: BLAST: gb:AAG18338.1; AF268317_1 (AF268317) ComE [Neisseria gonorrhoeae]; E=2e-06 pir:F72301; comEA protein-related protein - Thermotoga maritima; E=2e-06 embl:CAB44958.1; (AJ242837) ComEA protein [Neisseria; E=3e-06 COG: TM1052; COG1555 DNA uptake protein and related DNA-binding proteins; E=2e-07 slr0197_2; COG1555 DNA uptake protein and related DNA-binding; E=7e-05 VC1917; COG1555 DNA uptake protein and related DNA-binding proteins; E=1e-04 PFAM: PF00633; Helix-hairpin-helix motif.; E=0.4; competence protein ComEA 6444074..6444778 Rhodopirellula baltica SH 1 1790400 NP_870249.1 CDS RB11964 NC_005027.1 6444840 6445160 D PMID: 98263372 best DB hits: BLAST: embl:CAC11346.1; (AL445063) conserved hypothetical protein; E=4e-14 pir:F72369; conserved hypothetical protein - Thermotoga maritima; E=1e-12 pir:A71457; hypothetical protein PH0311 - Pyrococcus horikoshii; E=5e-12 COG: Ta0200; COG2151 aromatic ring hydroxylating enzyme; E=4e-15 slr0067; COG0489 ATPases involved in chromosome partitioning; E=0.007 PFAM: PF01883; Domain of unknown function DUF59; E=1.4e-19; component of ring hydroxylating complex 6444840..6445160 Rhodopirellula baltica SH 1 1792893 NP_870250.1 CDS tesB NC_005027.1 6445166 6445558 D PMID: 10876240 PMID: 3294803 PMID: 9278503 PMID: 8905232 PMID: 11206551 PMID: 11258796 PMID: 10493123 best DB hits: BLAST: swissprot:P08999; YBGC_ECOLI 15.6 KDA PROTEIN IN CYDB-TOLQ; E=2e-11 pir:D82152; conserved hypothetical protein VC1840 [imported] -; E=4e-11 gb:AAK03055.1; (AE006136) unknown [Pasteurella multocida]; E=8e-11 COG: ybgC; COG0824 Predicted thioesterase; E=2e-12; acyl-CoA thioesterase 6445166..6445558 Rhodopirellula baltica SH 1 1790967 NP_870251.1 CDS RB11969 NC_005027.1 6445572 6446717 D PMID: 9389475 best DB hits: BLAST: pir:D69211; conserved hypothetical protein MTH835 - Methanobacterium; E=4e-09 pir:G64401; hypothetical protein MJ0815 - Methanococcus jannaschii; E=7e-06 gb:AAB90178.1; (AE001029) conserved hypothetical protein; E=5e-05 COG: MTH835; COG1821 Predicted ATP-utilizing enzymes of ATP-grasp; E=4e-10 PFAM: PF02655; Domain of unknown function DU; E=5.6e-08; hypothetical protein 6445572..6446717 Rhodopirellula baltica SH 1 1792586 NP_870252.1 CDS RB11973 NC_005027.1 6446722 6447543 R hypothetical protein complement(6446722..6447543) Rhodopirellula baltica SH 1 1790018 NP_870253.1 CDS RB11975 NC_005027.1 6447801 6455216 D PMID: 10662695 PMID: 10649995 best DB hits: BLAST: gb:AAF26921.1; AF210843_18 (AF210843) polyketide synthase [Sorangium; E=0.0 gb:AAF26923.1; AF210843_20 (AF210843) polyketide synthase [Sorangium; E=0.0 gb:AAF62883.1; AF217189_6 (AF217189) epoD [Sorangium cellulosum]; E=0.0 COG: BS_fabD; COG0331 (acyl-carrier-protein) S-malonyltransferase; E=7e-31 PA2965; COG0304 3-oxoacyl-(acyl-carrier-protein) synthase I; E=3e-28 PA5234; COG0604 NADPH:quinone reductase and related Zn-dependent; E=2e-27 PFAM: PF00108; Thiolase, N-terminal domain; E=7.3e-07 PF00109; Beta-ketoacyl synthase, N-ter; E=1e-125 PF02801; Beta-ketoacyl synthase, C-ter; E=2.5e-77; polyketide synthase 6447801..6455216 Rhodopirellula baltica SH 1 1792688 NP_870254.1 CDS RB11976 NC_005027.1 6455283 6455996 R PMID: 10984043 best DB hits: BLAST: pir:B83500; probable two-component response regulator PA1157; E=3e-51 pir:F82213; DNA-binding response regulator VC1320 [imported] -; E=4e-41 pir:C83420; probable two-component response regulator PA1799; E=3e-39 COG: PA1157; COG0745 Response regulators consisting of a CheY-like; E=3e-52 rstA; COG0745 Response regulators consisting of a CheY-like receiver; E=5e-34 BS_yclJ; COG0745 Response regulators consisting of a CheY-like; E=8e-34 PFAM: PF00072; Response regulator receiver doma; E=4e-27 PF00486; Transcriptional regulatory prote; E=2.7e-17; two-component response regulator complement(6455283..6455996) Rhodopirellula baltica SH 1 1795672 NP_870255.1 CDS RB11977 NC_005027.1 6455958 6456548 D ATP-binding protein 6455958..6456548 Rhodopirellula baltica SH 1 1792667 NP_870256.1 CDS RB11978 NC_005027.1 6456627 6459272 R PMID: 10984043 best DB hits: BLAST: pir:B83340; hypothetical protein PA2451 [imported] - Pseudomonas; E=3e-11 swissprot:Q01578; GNL_ZYMMO GLUCONOLACTONASE PRECURSOR; E=2e-07 swissprot:P10478; XYNZ_CLOTM ENDO-1,4-BETA-XYLANASE Z PRECURSOR; E=4e-06 COG: PA2451; COG2382 Enterochelin esterase and related enzymes; E=3e-12 BS_ybbA; COG2819 Predicted hydrolase of the alpha/beta superfamily; E=0.001 fes; COG2382 Enterochelin esterase and related enzymes; E=0.002; hydrolase complement(6456627..6459272) Rhodopirellula baltica SH 1 1792576 NP_870257.1 CDS RB11981 NC_005027.1 6459460 6460413 D PMID: 11058132 best DB hits: BLAST: pir:F75516; hypothetical protein - Deinococcus radiodurans (strain; E=8e-44 ddbj:BAB07122.1; (AP001518) ABC transporter (substrate-binding; E=1e-15 gb:AAG18895.1; (AE004992) Vng0316c [Halobacterium sp. NRC-1]; E=1e-15 COG: DR0462; COG0614 ABC-type Fe3+-siderophores transport systems,; E=7e-45 PFAM: PF01497; Periplasmic binding protein; E=0.18; ABC transporter substrate-binding protein 6459460..6460413 Rhodopirellula baltica SH 1 1796807 NP_870258.1 CDS RB11982 NC_005027.1 6460440 6460583 D hypothetical protein 6460440..6460583 Rhodopirellula baltica SH 1 1790251 NP_870259.1 CDS hisI NC_005027.1 6460591 6460971 R PMID: 8201624 best DB hits: BLAST: swissprot:Q43925; HIS3_AZOCH PHOSPHORIBOSYL-AMP CYCLOHYDROLASE; E=3e-28 pir:E83011; phosphoribosyl-AMP cyclohydrolase PA5066 [imported] -; E=5e-28 swissprot:O26347; HIS3_METTH PHOSPHORIBOSYL-AMP CYCLOHYDROLASE; E=7e-25 COG: PA5066; COG0139 Phosphoribosyl-AMP cyclohydrolase; E=5e-29 PFAM: PF01502; Phosphoribosyl-AMP cyclohydrolase; E=2.5e-43; phosphoribosyl-AMP cyclohydrolase complement(6460591..6460971) Rhodopirellula baltica SH 1 1792702 NP_870260.1 CDS RB11985 NC_005027.1 6460980 6461987 R PMID: 11058132 PMID: 7602590 PMID: 1420281 best DB hits: BLAST: ddbj:BAB04654.1; (AP001510) quinone oxidoreductase [Bacillus; E=2e-43 embl:CAB65629.1; (AL136149) oxidoreductase.; E=1e-31 swissprot:P11415; QOR_CAVPO QUINONE OXIDOREDUCTASE (NADPH:QUINONE; E=3e-31 COG: BH0935; COG0604 NADPH:quinone reductase and related Zn-dependent; E=2e-44 PA5427; COG1064 Zn-dependent alcohol dehydrogenases; E=6e-15 BH0738; COG0604 NADPH:quinone reductase and related Zn-dependent; E=5e-14 PFAM: PF00106; short chain dehydrogenase; E=0.46 PF00107; Zinc-binding dehydrogenases; E=1.6e-79; quinone oxidoreductase complement(6460980..6461987) Rhodopirellula baltica SH 1 1794240 NP_870261.1 CDS RB11986 NC_005027.1 6462064 6465612 R PMID: 10762268 best DB hits: BLAST: gb:AAF04854.1; AF197912_1 (AF197912) histidine protein kinase; E=3e-57 pir:E83212; probable sensorresponse regulator hybrid PA3462; E=4e-56 pir:H83132; probable sensorresponse regulator hybrid PA4112; E=8e-51 COG: PA3462; COG0642 Sensory transduction histidine kinases; E=3e-57 PFAM: PF00989; PAS domain; E=3.5e-07 PF00512; His Kinase A (phosphoacceptor; E=2.5e-21 PF02518; Histidine kinase-, DNA gyrase; E=6.8e-39; histidine protein kinase homolog GacS complement(6462064..6465612) Rhodopirellula baltica SH 1 1790887 NP_870262.1 CDS RB11988 NC_005027.1 6465521 6468163 R PMID: 11410353 PMID: 11856348 PMID: 8969512 PMID: 11234002 best DB hits: BLAST: swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=2e-33 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=3e-33 swissprot:Q11053; PKNH_MYCTU PROBABLE SERINETHREONINE-PROTEIN; E=7e-29 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=3e-34 PFAM: PF00069; Protein kinase domain; E=6.5e-41; serine/threonine-protein kinase pknB complement(6465521..6468163) Rhodopirellula baltica SH 1 1790485 NP_870263.1 CDS RB11990 NC_005027.1 6468160 6468810 R best DB hits: PFAM: PF00140; Sigma-70 factor; E=0.0091 PF00196; Bacterial regulatory proteins, l; E=0.0013; sigma factor complement(6468160..6468810) Rhodopirellula baltica SH 1 1794056 NP_870264.1 CDS RB11991 NC_005027.1 6468817 6469734 R PMID: 10567266 PMID: 7678591 PMID: 7934817 best DB hits: BLAST: swissprot:P28606; YGLA_SYNP2 HYPOTHETICAL 34.1 KD PROTEIN IN GLNA; E=5e-60 embl:CAA78368.1; (Z13965) Portion of hypothetical protein; E=5e-60 embl:CAA78369.1; (Z13965) Portion of hypothetical protein; E=2e-54 COG: DR0833; COG0123 Deacetylases, including yeast histone deacetylase; E=3e-51 PFAM: PF00850; Histone deacetylase; E=1.2e-50; histone deacetylase complement(6468817..6469734) Rhodopirellula baltica SH 1 1792466 NP_870265.1 CDS RB11992 NC_005027.1 6469784 6470401 D hypothetical protein 6469784..6470401 Rhodopirellula baltica SH 1 1792747 NP_870266.1 CDS RB11993 NC_005027.1 6469886 6470458 R hypothetical protein complement(6469886..6470458) Rhodopirellula baltica SH 1 1793138 NP_870267.1 CDS RB11994 NC_005027.1 6470459 6472660 D PMID: 9384377 best DB hits: BLAST: pir:B69988; hypothetical protein ytaP - Bacillus subtilis -----; E=0.20; hypothetical protein 6470459..6472660 Rhodopirellula baltica SH 1 1795151 NP_870268.1 CDS RB11998 NC_005027.1 6472803 6474041 R best DB hits: BLAST: pir:E82768; conserved hypothetical protein XF0752 [imported] -; E=3e-13 pir:A82381; conserved hypothetical protein VCA1077 [imported] -; E=1e-10 pir:E83347; hypothetical protein PA2395 [imported] - Pseudomonas; E=4e-10 COG: XF0752_2; COG1262 Uncharacterized BCR; E=1e-13; transcriptional regulator complement(6472803..6474041) Rhodopirellula baltica SH 1 1793525 NP_870269.1 CDS RB12002 NC_005027.1 6474153 6474959 R PMID: 8905231 best DB hits: BLAST: pir:F72334; conserved hypothetical protein - Thermotoga maritima; E=2e-16 pir:H75400; conserved hypothetical protein - Deinococcus radiodurans; E=6e-12 pir:S75046; hypothetical protein slr1718 - Synechocystis sp. (strain; E=3e-11 COG: TM0797; COG2045 Uncharacterized ACR; E=2e-17; hypothetical protein complement(6474153..6474959) Rhodopirellula baltica SH 1 1792595 NP_870270.1 CDS RB12005 NC_005027.1 6475013 6475396 R hypothetical protein complement(6475013..6475396) Rhodopirellula baltica SH 1 1793681 NP_870271.1 CDS RB12006 NC_005027.1 6475429 6476454 D PMID: 9849958 best DB hits: BLAST: gb:AAG59625.1; (AF301417) GU1 [Trypanosoma brucei]; E=2e-08 gb:AAF82144.1; AC034256_8 (AC034256) Contains similarity to F-box; E=1e-06 gb:AAC77910.1; (AF061443) G protein-coupled receptor LGR4 [Rattus; E=6e-05; G protein-coupled receptor LGR4 6475429..6476454 Rhodopirellula baltica SH 1 1795348 NP_870272.1 CDS phr NC_005027.1 6476467 6478047 R PMID: 8905231 PMID: 86083177 PMID: 90243674 best DB hits: BLAST: pir:S74805; DNA photolyase - Synechocystis sp. (strain PCC 6803); E=1e-121 pir:B82155; deoxyribodipyrimidine photolyase VC1814 [imported] -; E=5e-66 pir:E83062; deoxyribodipyrimidine photolyase PA4660 [imported] -; E=4e-49 COG: sll1629; COG0415 Deoxyribodipyrimidine photolyase; E=1e-123 PFAM: PF00875; DNA photolyase; E=4.8e-86; DNA photolyase complement(6476467..6478047) Rhodopirellula baltica SH 1 1790469 NP_870273.1 CDS RB12009 NC_005027.1 6477951 6479495 R hypothetical protein complement(6477951..6479495) Rhodopirellula baltica SH 1 1792125 NP_870274.1 CDS xylB NC_005027.1 6479639 6481168 D PMID: 9495747 best DB hits: BLAST: gb:AAC46146.1; (AF001974) xylulose kinase; XylB; E=1e-108 swissprot:P39211; XYLB_BACSU XYLULOSE KINASE (XYLULOKINASE); E=4e-79 ddbj:BAB06475.1; (AP001516) xylose kinase [Bacillus halodurans]; E=5e-76 COG: BS_xylB; COG1070 Sugar (pentulose and hexulose) kinases; E=4e-80 PAB2406; COG0554 Glycerol kinase; E=2e-31 APE0017; COG1070 Sugar (pentulose and hexulose) kinases; E=1e-27 PFAM: PF00370; FGGY family of carbohydrate kinas; E=6e-96 PF02782; FGGY family of carbohydrate kinas; E=7.6e-63; xylulose kinase 6479639..6481168 Rhodopirellula baltica SH 1 1790620 NP_870275.1 CDS proB NC_005027.1 6481165 6482334 D catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 6481165..6482334 Rhodopirellula baltica SH 1 1792471 NP_870276.1 CDS RB12015 NC_005027.1 6482423 6483388 R hypothetical protein complement(6482423..6483388) Rhodopirellula baltica SH 1 1793188 NP_870277.1 CDS RB12019 NC_005027.1 6483600 6484598 D PMID: 10984043 PMID: 9560382 best DB hits: BLAST: pir:T35322; hypothetical protein SC5H1.06c - Streptomyces coelicolor; E=1e-20 swissprot:P46336; IOLS_BACSU IOLS PROTEIN (VEGETATIVE PROTEIN 147); E=5e-18 pir:C83506; probable oxidoreductase PA1127 [imported] - Pseudomonas; E=9e-18 COG: BS_iolS; COG0667 Predicted oxidoreductases (related to aryl-alcohol; E=5e-19 Ta0027; COG0656 Aldo/keto reductases, related to diketogulonate; E=5e-07 PFAM: PF00248; Aldo/keto reductase; E=9e-24; oxidoreductase 6483600..6484598 Rhodopirellula baltica SH 1 1793461 NP_870278.1 CDS RB12020 NC_005027.1 6484562 6484672 R hypothetical protein complement(6484562..6484672) Rhodopirellula baltica SH 1 1792338 NP_870279.1 CDS RB12021 NC_005027.1 6484770 6485018 R hypothetical protein complement(6484770..6485018) Rhodopirellula baltica SH 1 1796967 NP_870280.1 CDS RB12022 NC_005027.1 6485015 6486337 R hypothetical protein complement(6485015..6486337) Rhodopirellula baltica SH 1 1793657 NP_870281.1 CDS RB12024 NC_005027.1 6486334 6489477 R best DB hits: PFAM: PF00034; Cytochrome c; E=0.15; signal peptide complement(6486334..6489477) Rhodopirellula baltica SH 1 1794227 NP_870282.1 CDS RB12030 NC_005027.1 6489580 6490374 D hypothetical protein 6489580..6490374 Rhodopirellula baltica SH 1 1795200 NP_870283.1 CDS RB12031 NC_005027.1 6490359 6490799 R hypothetical protein complement(6490359..6490799) Rhodopirellula baltica SH 1 1795343 NP_870284.1 CDS RB12035 NC_005027.1 6490966 6492021 D hypothetical protein 6490966..6492021 Rhodopirellula baltica SH 1 1796972 NP_870285.1 CDS RB12038 NC_005027.1 6492138 6493271 D best DB hits: BLAST: ddbj:BAB04429.1; (AP001509) BH0710~unknown conserved protein; E=8e-91 pir:T34927; probable oxidoreductase - Streptomyces coelicolor; E=5e-84 embl:CAB88965.1; (AL353864) oxidoreductase.; E=3e-46 COG: BH0710; COG0673 Predicted dehydrogenases and related proteins; E=7e-92 PFAM: PF01408; Oxidoreductase, NAD-bin; E=7e-36 PF02894; Oxidoreductase, C-termi; E=6.8e-06; hypothetical protein 6492138..6493271 Rhodopirellula baltica SH 1 1792555 NP_870286.1 CDS glcD NC_005027.1 6493268 6494713 D PMID: 8606183 PMID: 11283302 best DB hits: BLAST: pir:E82977; glycolate oxidase subunit GlcD PA5355 [imported] -; E=1e-102 pir:S74338; glycolate oxidase chain glcD - Synechocystis sp. (strain; E=1e-101 swissprot:P52075; GLCD_ECOLI GLYCOLATE OXIDASE SUBUNIT GLCD; E=1e-99 COG: PA5355; COG0277 FAD/FMN-containing dehydrogenases; E=1e-103 PFAM: PF01565; FAD binding domain; E=2.7e-55 PF02913; FAD linked oxidases, C-terminal; E=7.9e-53; glycolate oxidase subunit GlcD 6493268..6494713 Rhodopirellula baltica SH 1 1794786 NP_870287.1 CDS glcE NC_005027.1 6494706 6495938 D PMID: 8606183 best DB hits: BLAST: pir:H65083; glycolate oxidase subunits GlcE and GlcF - Escherichia; E=6e-23 swissprot:P52073; GLCE_ECOLI GLYCOLATE OXIDASE SUBUNIT GLCE; E=6e-23 pir:D82977; glycolate oxidase subunit GlcE PA5354 [imported] -; E=1e-22 COG: glcF_1; COG0277 FAD/FMN-containing dehydrogenases; E=6e-24 PFAM: PF01565; FAD binding domain; E=6.6e-19; glycolate oxidase subunits GlcE and GlcF 6494706..6495938 Rhodopirellula baltica SH 1 1792982 NP_870288.1 CDS glcF NC_005027.1 6495935 6497269 D PMID: 8606183 best DB hits: BLAST: pir:G75361; glycolate oxidase, iron-sulfur subunit - Deinococcus; E=1e-101 pir:S75231; (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) - Synechocystis; E=3e-62 ddbj:BAB05854.1; (AP001514) glycolate oxidase iron-sulfur subunit; E=2e-58 COG: DR1730; COG0247 Fe-S oxidoreductases; E=1e-102 PFAM: PF00037; 4Fe-4S binding domain; E=0.21 PF02754; Domain of unknown function (DUF2; E=4.9e-07; glycolate oxidase, iron-sulfur subunit 6495935..6497269 Rhodopirellula baltica SH 1 1794605 NP_870289.1 CDS RB12043 NC_005027.1 6497277 6497681 D hypothetical protein 6497277..6497681 Rhodopirellula baltica SH 1 1796883 NP_870290.1 CDS RB12046 NC_005027.1 6497841 6497996 D hypothetical protein 6497841..6497996 Rhodopirellula baltica SH 1 1793575 NP_870291.1 CDS RB12047 NC_005027.1 6497993 6499450 D PMID: 8037924 PMID: 9278503 PMID: 8905232 PMID: 1931833 best DB hits: BLAST: swissprot:P25888; RHLE_ECOLI ATP-DEPENDENT RNA HELICASE; E=5e-78 gb:AAG55168.1; AE005260_7 (AE005260) ATP-dependent RNA; E=5e-78 pir:D83591; probable ATP-dependent RNA helicase PA0428 [imported] -; E=8e-77 COG: rhlE; COG0513 Superfamily II DNA and RNA helicases; E=4e-79 PFAM: PF00270; DEAD/DEAH box helicase; E=5.5e-70 PF02776; Thiamine pyrophosphate enzyme,; E=0.21 PF00271; Helicase conserved C-terminal d; E=3.5e-36; ATP-dependent RNA helicase rhlE 6497993..6499450 Rhodopirellula baltica SH 1 1795217 NP_870292.1 CDS RB12048 NC_005027.1 6499453 6502215 R best DB hits: BLAST: pir:T49412; hypothetical protein B1D4.270 [imported] - Neurospora; E=0.89 PFAM: PF00432; Prenyltransferase and squalene ox; E=0.026; hypothetical protein complement(6499453..6502215) Rhodopirellula baltica SH 1 1794313 NP_870293.1 CDS RB12053 NC_005027.1 6502199 6502558 R PMID: 10984043 PMID: 1644779 PMID: 2670903 best DB hits: BLAST: pir:F83274; conserved hypothetical protein PA2982 [imported] -; E=3e-04 embl:CAB50919.1; (AJ243354) hypothetical protein [Pseudomonas; E=7e-04 pir:S74451; hypothetical protein sll1405 - Synechocystis sp. (strain; E=0.001 COG: PA2982; COG0848 Biopolymer transport protein; E=3e-05 PFAM: PF02472; Biopolymer transport protein ExbD/To; E=1.6e-12; export protein ExbD complement(6502199..6502558) Rhodopirellula baltica SH 1 1794634 NP_870294.1 CDS RB12055 NC_005027.1 6502628 6503587 R PMID: 10984043 best DB hits: BLAST: pir:G83274; probable tolQ-type transport protein PA2983 [imported] -; E=6e-07 pir:G70470; TolQ homolog - Aquifex aeolicus ----- gb:; E=3e-05 pir:D82726; conserved hypothetical protein XF1079 [imported] -; E=7e-04 COG: PA2983; COG0811 Biopolymer transport proteins; E=6e-08 PFAM: PF01618; MotA/TolQ/ExbB proton channel famil; E=6.7e-17; tolQ-type transport protein complement(6502628..6503587) Rhodopirellula baltica SH 1 1793531 NP_870295.1 CDS RB12056 NC_005027.1 6503584 6506925 R PMID: 10192388 best DB hits: BLAST: pir:T39943; hypothetical protein SPBC23E6.09 - fission yeast; E=2e-04 pir:C72048; tpr repeats-ct683 hypothetical protein - Chlamydophila; E=0.006 swissprot:P42810; YAG7_PSEAE HYPOTHETICAL PROTEIN PA4667 -----; E=0.24 COG: CPn0693; COG0457 TPR-repeat-containing proteins; E=6e-04 PFAM: PF00515; TPR Domain; E=0.0018 PF00903; Glyoxalase/Bleomycin resistance; E=0.85 PF00515; TPR Domain; E=0.52; hypothetical protein complement(6503584..6506925) Rhodopirellula baltica SH 1 1796105 NP_870296.1 CDS RB12060 NC_005027.1 6506977 6507405 R hypothetical protein complement(6506977..6507405) Rhodopirellula baltica SH 1 1793172 NP_870297.1 CDS pyrG NC_005027.1 6507444 6509099 R CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(6507444..6509099) Rhodopirellula baltica SH 1 1795494 NP_870298.1 CDS RB12064 NC_005027.1 6509306 6509911 R best DB hits: BLAST: pir:T07014; phosphoglycerate kinase (EC 2.7.2.3) precursor,; E=0.68; hypothetical protein complement(6509306..6509911) Rhodopirellula baltica SH 1 1794228 NP_870299.1 CDS RB12065 NC_005027.1 6509803 6510318 R hypothetical protein complement(6509803..6510318) Rhodopirellula baltica SH 1 1793447 NP_870300.1 CDS RB12066 NC_005027.1 6510147 6510554 D hypothetical protein 6510147..6510554 Rhodopirellula baltica SH 1 1790613 NP_870301.1 CDS RB12067 NC_005027.1 6510236 6510559 D hypothetical protein 6510236..6510559 Rhodopirellula baltica SH 1 1794767 NP_870302.1 CDS RB12068 NC_005027.1 6510594 6512255 R PMID: 8063104 PMID: 8635757 PMID: 12000953 best DB hits: BLAST: gb:AAB89850.1; (AE001008) conserved hypothetical protein; E=2e-06 swissprot:P54741; AFSK_STRCO SERINETHREONINE PROTEIN KINASE AFSK; E=1e-05 embl:CAB88430.1; (AL353815) serinethreonine protein kinase; E=1e-05 COG: AF1399; COG1520 Uncharacterized proteins of WD40-like repeat family; E=1e-07 PFAM: PF01011; PQQ enzyme repeat; E=0.00048; serine/threonine protein kinase afsK complement(6510594..6512255) Rhodopirellula baltica SH 1 1793747 NP_870303.1 CDS RB12071 NC_005027.1 6512255 6512866 D hypothetical protein 6512255..6512866 Rhodopirellula baltica SH 1 1792542 NP_870304.1 CDS RB12072 NC_005027.1 6512863 6512973 D hypothetical protein 6512863..6512973 Rhodopirellula baltica SH 1 1790556 NP_870305.1 CDS RB12073 NC_005027.1 6513066 6513974 R PMID: 10984043 best DB hits: BLAST: pir:A83457; conserved hypothetical protein PA1501 [imported] -; E=1e-17 pir:D83577; conserved hypothetical protein PA0550 [imported] -; E=8e-13 gb:AAG54864.1; AE005231_11 (AE005231) glyoxylate-induced protein; E=5e-12 COG: PA1501; COG1082 Predicted endonucleases; E=1e-18; hypothetical protein complement(6513066..6513974) Rhodopirellula baltica SH 1 1794003 NP_870306.1 CDS RB12075 NC_005027.1 6513960 6514211 D hypothetical protein 6513960..6514211 Rhodopirellula baltica SH 1 1790945 NP_870307.1 CDS RB12076 NC_005027.1 6514171 6515541 R keratin complement(6514171..6515541) Rhodopirellula baltica SH 1 1793826 NP_870308.1 CDS RB12079 NC_005027.1 6515568 6515732 D hypothetical protein 6515568..6515732 Rhodopirellula baltica SH 1 1792247 NP_870309.1 CDS RB12080 NC_005027.1 6515753 6517231 R PMID: 1860862 PMID: 9278503 PMID: 11206551 PMID: 11258796 PMID: 7928962 PMID: 8208244 PMID: 8132457 best DB hits: BLAST: swissprot:P24206; PIMT_ECOLI PROTEIN-L-ISOASPARTATE; E=7e-39 pir:G82311; protein-L-isoaspartate O-methyltransferase VC0532; E=3e-38 swissprot:P45683; PIMT_PSEAE PROTEIN-L-ISOASPARTATE; E=9e-36 COG: pcm; COG2518 Protein-L-isoaspartate carboxylmethyltransferase; E=7e-40 PFAM: PF00398; Ribosomal RNA adenine dimethyl; E=0.12 PF01135; Protein-L-isoaspartate(D-aspar; E=6.1e-63; protein-L-isoaspartate O-methyltransferase complement(6515753..6517231) Rhodopirellula baltica SH 1 1790650 NP_870310.1 CDS RB12081 NC_005027.1 6517228 6518865 R PMID: 8380170 PMID: 9278503 PMID: 9205837 PMID: 11206551 PMID: 11258796 PMID: 8212131 best DB hits: BLAST: pir:S76869; hypothetical protein - Synechocystis sp. (strain PCC; E=2e-32 pir:C75615; exopolyphosphatase - Deinococcus radiodurans (strain R1); E=2e-27 swissprot:P29014; PPX_ECOLI EXOPOLYPHOSPHATASE (METAPHOSPHATASE); E=4e-27 COG: sll1546; COG0248 Exopolyphosphatase; E=2e-33 PFAM: PF02541; Ppx/GppA phosphatase; E=6e-15 PF01966; HD domain; E=0.084; exopolyphosphatase complement(6517228..6518865) Rhodopirellula baltica SH 1 1792212 NP_870311.1 CDS RB12082 NC_005027.1 6518874 6519608 R PMID: 11466286 best DB hits: BLAST: pir:A75406; hydrolase - Deinococcus radiodurans (strain R1) -----; E=0.048 gb:AAG59075.1; AE005619_8 (AE005619) phosphatase; E=0.11 pir:S40829; hypothetical 23.5K protein (glnA-fdhE intergenic region); E=0.12 COG: DR1344; COG1011 Predicted hydrolases of the HAD superfamily; E=0.005 PFAM: PF00702; haloacid dehalogenase-like hydrolas; E=0.72; hydrolase- phosphatase or haloacid dehydrogenase complement(6518874..6519608) Rhodopirellula baltica SH 1 1794420 NP_870312.1 CDS RB12084 NC_005027.1 6519572 6520429 R hypothetical protein complement(6519572..6520429) Rhodopirellula baltica SH 1 1794311 NP_870313.1 CDS RB12086 NC_005027.1 6520422 6520637 D hypothetical protein 6520422..6520637 Rhodopirellula baltica SH 1 1790064 NP_870314.1 CDS ilvD NC_005027.1 6520558 6522321 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 6520558..6522321 Rhodopirellula baltica SH 1 1792707 NP_870315.1 CDS RB12088 NC_005027.1 6522441 6522755 R hypothetical protein complement(6522441..6522755) Rhodopirellula baltica SH 1 1794244 NP_870316.1 CDS RB12089 NC_005027.1 6522897 6524414 R PMID: 8244397 PMID: 8325651 best DB hits: BLAST: gb:AAA16877.1; (L13329) iduronate-2-sulfatase [Homo sapiens]; E=7e-51 gb:AAB33747.1; iduronate-2-sulfatase, IDS {EC 3.1.6.13} [human,; E=3e-50 gb:AAA37880.1; (L07921) iduronate sulfatase [Mus musculus]; E=1e-47 COG: PA0031; COG3119 Arylsulfatase A and related enzymes; E=3e-35 BS_yfnI; COG1368 Phosphoglycerol transferase and related proteins,; E=9e-04 PA0924; COG3083 Predicted hydrolase of alkaline phosphatase; E=0.004 PFAM: PF00884; Sulfatase; E=2e-22; iduronate-2-sulfatase complement(6522897..6524414) Rhodopirellula baltica SH 1 1793234 NP_870317.1 CDS RB12092 NC_005027.1 6524631 6526481 R PMID: 94292193 best DB hits: BLAST: gb:AAF30402.1; AF109924_1 (AF109924) sulfatase 1 precursor [Helix; E=1e-36 ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=6e-36 embl:CAA34667.1; (X16679) arylsulfatase [Hemicentrotus; E=4e-32 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=2e-28 PFAM: PF00884; Sulfatase; E=8.4e-49; N-acetylgalactosamine 6-sulfate sulfatase (GALNS) complement(6524631..6526481) Rhodopirellula baltica SH 1 1792647 NP_870318.1 CDS RB12097 NC_005027.1 6526718 6529564 D signal peptide 6526718..6529564 Rhodopirellula baltica SH 1 1794277 NP_870319.1 CDS RB12102 NC_005027.1 6529595 6531028 D hypothetical protein 6529595..6531028 Rhodopirellula baltica SH 1 1794560 NP_870320.1 CDS RB12104 NC_005027.1 6531127 6531540 D best DB hits: BLAST: pir:T05663; hypothetical protein F22I13.120 - Arabidopsis thaliana; E=0.65; hypothetical protein 6531127..6531540 Rhodopirellula baltica SH 1 1790889 NP_870321.1 CDS pepA NC_005027.1 6531471 6532994 R PMID: 9864319 PMID: 10984043 best DB hits: BLAST: swissprot:O67868; AMPA_AQUAE PROBABLE CYTOSOL AMINOPEPTIDASE; E=6e-73 pir:F82843; aminopeptidase AI XF0138 [imported] - Xylella; E=3e-70 swissprot:O68822; AMPA_PSEAE CYTOSOL AMINOPEPTIDASE (LEUCINE; E=1e-67 COG: aq_2099; COG0260 Leucyl aminopeptidase; E=5e-74 PFAM: PF00883; Cytosol aminopeptidase; E=1.7e-148; cytosol aminopeptidase complement(6531471..6532994) Rhodopirellula baltica SH 1 1795715 NP_870322.1 CDS RB12108 NC_005027.1 6533049 6534506 R PMID: 9665876 PMID: 8346225 best DB hits: BLAST: ddbj:BAB06667.1; (AP001517) two-component response regulator in; E=2e-87 pir:F71315; probable response regulatory protein (atoC) - syphilis; E=1e-85 gb:AAF33506.1; (AF170176) Salmonella typhimurium transcriptional; E=5e-83 COG: BH2948; COG2204 AAA superfamily ATPases with N-terminal receiver; E=2e-88 aq_218_2; COG1221 NtrC family transcriptional regulators, ATPase; E=1e-66 CT468; COG2204 AAA superfamily ATPases with N-terminal receiver; E=5e-66 PFAM: PF00072; Response regulator receiver doma; E=1.2e-32 PF00158; Sigma-54 interaction domain; E=1.7e-122; response regulatory protein (atoC) complement(6533049..6534506) Rhodopirellula baltica SH 1 1794387 NP_870323.1 CDS RB12110 NC_005027.1 6534622 6534792 R hypothetical protein complement(6534622..6534792) Rhodopirellula baltica SH 1 1796103 NP_870324.1 CDS RB12112 NC_005027.1 6534940 6536790 R best DB hits: BLAST: pir:T50995; related to cytoskeleton assembly control protein SLA1; E=6e-07 pir:T37781; probable cytoskeleton assembly control protein - fission; E=5e-05 embl:CAA84826.1; (Z35768) ORF YBL007c [Saccharomyces cerevisiae]; E=0.18; cytoskeleton assembly control protein SLA1 complement(6534940..6536790) Rhodopirellula baltica SH 1 1793174 NP_870325.1 CDS carB NC_005027.1 6536791 6540042 R PMID: 8905231 PMID: 6308632 best DB hits: BLAST: swissprot:P00968; CARB_ECOLI CARBAMOYL-PHOSPHATE SYNTHASE LARGE; E=0.0 pir:S76557; carbamoyl-phosphate synthase (glutamine-hydrolyzing) (EC; E=0.0 gb:AAG10606.1; AC008030_6 (AC008030) carbamoyl phosphate synthetase; E=0.0 COG: AF1274; COG0458 Carbamoylphosphate synthase large subunit (split gene; E=0.0 carB; COG0458 Carbamoylphosphate synthase large subunit (split gene in; E=0.0 BU144; COG0458 Carbamoylphosphate synthase large subunit (split gene; E=0.0 PFAM: PF00289; Carbamoyl-phosphate synthase L; E=2.9e-53 PF02222; ATP-grasp domain; E=0.38 PF02786; Carbamoyl-phosphate synthase L; E=3.6e-108; carbamoyl-phosphate synthase (glutamine-hydrolyzing) large chain complement(6536791..6540042) Rhodopirellula baltica SH 1 1796855 NP_870326.1 CDS RB12114 NC_005027.1 6539927 6540259 R hypothetical protein complement(6539927..6540259) Rhodopirellula baltica SH 1 1793442 NP_870327.1 CDS dnaQ NC_005027.1 6540281 6541348 R 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon complement(6540281..6541348) Rhodopirellula baltica SH 1 1793795 NP_870328.1 CDS RB12117 NC_005027.1 6541425 6541811 D hypothetical protein 6541425..6541811 Rhodopirellula baltica SH 1 1795901 NP_870329.1 CDS RB12118 NC_005027.1 6541757 6543253 R best DB hits: PFAM: PF01319; Cholesterol oxidase; E=0.23; hypothetical protein complement(6541757..6543253) Rhodopirellula baltica SH 1 1792712 NP_870330.1 CDS RB12124 NC_005027.1 6543314 6545887 R best DB hits: BLAST: gb:AAF73802.1; AF154033_1 (AF154033) surface protein PspC; E=0.82; signal peptide complement(6543314..6545887) Rhodopirellula baltica SH 1 1794743 NP_870331.1 CDS RB12129 NC_005027.1 6545870 6548362 D PMID: 9634230 PMID: 6353409 best DB hits: BLAST: swissprot:O06200; SYT_MYCTU THREONYL-TRNA SYNTHETASE; E=1e-124 pir:F83303; threonyl-tRNA synthetase PA2744 [imported] - Pseudomonas; E=8e-81 swissprot:O67583; SYT_AQUAE THREONYL-TRNA SYNTHETASE; E=2e-80 COG: Rv2614c; COG0441 Threonyl-tRNA synthetase; E=1e-125 PFAM: PF02824; TGS domain; E=2.6e-07 PF00587; tRNA synthetase class II (G, H,; E=7.8e-85; threonyl-tRNA synthetase 6545870..6548362 Rhodopirellula baltica SH 1 1795004 NP_870332.1 CDS RB12131 NC_005027.1 6548396 6548635 D hypothetical protein 6548396..6548635 Rhodopirellula baltica SH 1 1794372 NP_870333.1 CDS RB12132 NC_005027.1 6548550 6548702 R hypothetical protein complement(6548550..6548702) Rhodopirellula baltica SH 1 1793082 NP_870334.1 CDS dapE NC_005027.1 6548699 6550105 R PMID: 1644752 PMID: 1644751 best DB hits: BLAST: pir:E75324; ArgEDapE/Acy1 family protein - Deinococcus radiodurans; E=1e-114 ddbj:BAB07594.1; (AP001520) BH3875~unknown conserved protein in; E=1e-103 embl:CAC01315.1; (AL390968) peptidase [Streptomyces; E=5e-82 COG: DR2025; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate; E=1e-115 YFR044c; COG0624 Acetylornithine; E=2e-65 DR2017; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate; E=7e-46 PFAM: PF01546; Peptidase M20/M25/M40; E=2e-48; ArgE/DapE/Acy1 family protein complement(6548699..6550105) Rhodopirellula baltica SH 1 1790863 NP_870335.1 CDS RB12137 NC_005027.1 6550288 6550638 D PMID: 10952301 best DB hits: BLAST: swissprot:Q9KSW3; YB43_VIBCH HYPOTHETICAL PROTEIN VC1143 -----; E=2e-07 swissprot:Q9I0L7; YQ21_PSEAE HYPOTHETICAL PROTEIN PA2621; E=2e-04 swissprot:P75832; YLJA_ECOLI PROTEIN YLJA ----- pir: A64827; E=9e-04 COG: VC1143; COG2127 Uncharacterized ACR; E=2e-08 PFAM: PF02617; Uncharacterized ACR, COG2127; E=1.6e-08; hypothetical protein 6550288..6550638 Rhodopirellula baltica SH 1 1791064 NP_870336.1 CDS RB12138 NC_005027.1 6550672 6551958 D PMID: 10086841 best DB hits: BLAST: ddbj:BAB05070.1; (AP001511) BH1351~unknown conserved protein; E=4e-78 swissprot:P54462; YQEV_BACSU HYPOTHETICAL 51.7 KD PROTEIN IN; E=3e-75 pir:G81594; conserved hypothetical protein CP0277 [imported] -; E=3e-67 COG: BH1351; COG0621 Fe-S oxidoreductases family 1; E=3e-79 PFAM: PF00919; Uncharacterized protein famil; E=3.3e-29 PF02143; Radical activating enzyme; E=0.53; hypothetical protein 6550672..6551958 Rhodopirellula baltica SH 1 1792986 NP_870337.1 CDS RB12139 NC_005027.1 6551955 6552308 D best DB hits: BLAST: gb:AAG21389.1; AF302051_3 (AF302051) unknown [Bacillus; E=4e-15 ddbj:BAB07716.1; (AP001520) BH3997~unknown conserved protein in; E=6e-15 pir:C83047; conserved hypothetical protein PA4789 [imported] -; E=1e-12 COG: BH3997; COG1694 Predicted pyrophosphatase; E=6e-16; hypothetical protein 6551955..6552308 Rhodopirellula baltica SH 1 1793054 NP_870338.1 CDS RB12142 NC_005027.1 6552539 6552850 D hypothetical protein 6552539..6552850 Rhodopirellula baltica SH 1 1793781 NP_870339.1 CDS RB12144 NC_005027.1 6552826 6553137 R hypothetical protein complement(6552826..6553137) Rhodopirellula baltica SH 1 1791297 NP_870340.1 CDS RB12145 NC_005027.1 6553176 6554285 R PMID: 11058132 PMID: 3045084 best DB hits: BLAST: ddbj:BAB05138.1; (AP001512) molybdopterin biosynthesis [Bacillus; E=4e-58 pir:E69845; thiamin biosynthesis homolog yjbU - Bacillus subtilis; E=3e-57 pir:F69659; molybdopterin biosynthesis protein moeB - Bacillus; E=1e-50 COG: BH1419; COG0476 Dinucleotide-utilizing enzymes involved in; E=4e-59 PFAM: PF02254; KTN NAD-binding domain; E=0.29 PF00899; ThiF family; E=1e-46; molybdopterin biosynthesis protein MoeB complement(6553176..6554285) Rhodopirellula baltica SH 1 1791017 NP_870341.1 CDS prc NC_005027.1 6554674 6556800 R PMID: 10984043 PMID: 1729701 best DB hits: BLAST: pir:C83238; periplasmic tail-specific proteinase PA3257 [imported] -; E=5e-91 pir:F82634; tail-specific proteinase XF1823 [imported] - Xylella; E=5e-87 gb:AAK02353.1; (AE006061) Prc [Pasteurella multocida]; E=3e-75 COG: PA3257; COG0793 Periplasmic protease; E=4e-92 PFAM: PF00595; PDZ domain (Also known as DHR or GLG; E=1.1e-09 PF02692; Interphotoreceptor retinoid-binding; E=0.78; periplasmic tail-specific proteinase complement(6554674..6556800) Rhodopirellula baltica SH 1 1792539 NP_870342.1 CDS RB12150 NC_005027.1 6556901 6557062 D hypothetical protein 6556901..6557062 Rhodopirellula baltica SH 1 1793206 NP_870343.1 CDS RB12151 NC_005027.1 6557051 6557587 R best DB hits: BLAST: ddbj:BAB18046.1; (AB033991) BtrG [Bacillus circulans]; E=0.10; hypothetical protein complement(6557051..6557587) Rhodopirellula baltica SH 1 1794394 NP_870344.1 CDS RB12152 NC_005027.1 6557588 6557737 R hypothetical protein complement(6557588..6557737) Rhodopirellula baltica SH 1 1794757 NP_870345.1 CDS RB12153 NC_005027.1 6557715 6557966 R hypothetical protein complement(6557715..6557966) Rhodopirellula baltica SH 1 1792358 NP_870346.1 CDS RB12155 NC_005027.1 6557988 6561179 D signal peptide 6557988..6561179 Rhodopirellula baltica SH 1 1791033 NP_870347.1 CDS RB12159 NC_005027.1 6561122 6562663 D hypothetical protein 6561122..6562663 Rhodopirellula baltica SH 1 1794312 NP_870348.1 CDS trxA NC_005027.1 6562778 6563104 R PMID: 1379743 PMID: 3891733 PMID: 6099324 best DB hits: BLAST: swissprot:P00274; THIO_ECOLI THIOREDOXIN 1 (TRX1) (TRX) -----; E=3e-26 gb:AAG58975.1; AE005609_7 (AE005609) thioredoxin 1 [Escherichia; E=3e-26 pdb:2TRX; A Chain A, Thioredoxin ----- pdb: 2TRX B Chain B,; E=3e-26 COG: trxA; COG0526 Thiol-disulfide isomerase and thioredoxins; E=3e-27 PFAM: PF02114; Phosducin; E=0.01 PF00085; Thioredoxin; E=3.3e-47; thioredoxin complement(6562778..6563104) Rhodopirellula baltica SH 1 1793645 NP_870349.1 CDS RB12164 NC_005027.1 6563352 6564185 R PMID: 9389475 PMID: 93015679 best DB hits: BLAST: gb:AAB89052.1; (AE000953) mutator protein MutT, ; E=2e-04 swissprot:Q23236; YPAI_CAEEL HYPOTHETICAL 21.3 KD PROTEIN Y38A8.1; E=2e-04 ddbj:BAB05000.1; (AP001511) BH1281~unknown conserved protein in; E=6e-04 COG: AF2200; COG0494 NTP pyrophosphohydrolases including oxidative damage; E=2e-05 sll1054; COG0494 NTP pyrophosphohydrolases including oxidative; E=0.005 mutT; COG0494 NTP pyrophosphohydrolases including oxidative damage; E=0.007 PFAM: PF00293; MutT-like domain; E=7.1e-16; mutator protein MutT complement(6563352..6564185) Rhodopirellula baltica SH 1 1792296 NP_870350.1 CDS RB12167 NC_005027.1 6564302 6565081 R hypothetical protein complement(6564302..6565081) Rhodopirellula baltica SH 1 1793805 NP_870351.1 CDS RB12168 NC_005027.1 6565221 6565736 R hypothetical protein complement(6565221..6565736) Rhodopirellula baltica SH 1 1791301 NP_870352.1 CDS RB12172 NC_005027.1 6565829 6566260 R hypothetical protein complement(6565829..6566260) Rhodopirellula baltica SH 1 1794202 NP_870353.1 CDS flgI NC_005027.1 6566298 6567437 R PMID: 7921252 best DB hits: BLAST: pir:E81292; flagellar P-ring protein Cj1462 [imported] -; E=5e-16 pir:G72242; flagellar P-ring protein - Thermotoga maritima (strain; E=2e-11 pir:A71957; flagellar P-ring protein - Helicobacter pylori (strain; E=3e-11 COG: Cj1462; COG1706 Flagellar basal-body P-ring protein; E=5e-17 PFAM: PF02119; Flagellar P-ring protein; E=0.00098; flagellar P-ring protein complement(6566298..6567437) Rhodopirellula baltica SH 1 1794206 NP_870354.1 CDS flgH NC_005027.1 6567437 6568342 R PMID: 2211524 PMID: 9161424 PMID: 7921252 best DB hits: BLAST: pir:A83511; flagellar L-ring protein precursor FlgH PA1083; E=2e-08 swissprot:O67609; FLGH_AQUAE FLAGELLAR L-RING PROTEIN PRECURSOR; E=6e-08 gb:AAG29750.1; AF205139_2 (AF205139) flagellar L-ring protein; E=3e-06 COG: PA1083; COG2063 Flagellar basal body L-ring protein; E=2e-09 PFAM: PF02107; Flagellar L-ring protein; E=7.9e-15; flagellar L-ring protein precursor FlgH complement(6567437..6568342) Rhodopirellula baltica SH 1 1790879 NP_870355.1 CDS RB12178 NC_005027.1 6568324 6569757 R PMID: 10832645 best DB hits: BLAST: pir:C83227; hypothetical protein PA3350 [imported] - Pseudomonas; E=4e-04 gb:AAA97472.1; (U51896) LfgA [Vibrio parahaemolyticus]; E=0.012 COG: PA3350; COG1261 Flagellar basal body P-ring biosynthesis protein; E=4e-05; flagellar basal body P-ring biosynthesis protein FlgA complement(6568324..6569757) Rhodopirellula baltica SH 1 1795472 NP_870356.1 CDS flgG NC_005027.1 6569761 6570567 R PMID: 2129540 best DB hits: BLAST: pir:C70372; flagellar hook basal body protein flgG - Aquifex; E=3e-55 pir:A64718; flagellar basal body rod protein flgG - Helicobacter; E=2e-51 pir:F71801; flagellar basal-body rod protein (distal rod protein) -; E=4e-51 COG: aq_834; COG1749 Flagellar basal body and hook proteins; E=2e-56 PFAM: PF00460; Flagella basal body rod protein; E=4.1e-13; flagellar hook basal body protein flgG complement(6569761..6570567) Rhodopirellula baltica SH 1 1791228 NP_870357.1 CDS flgF NC_005027.1 6570608 6571429 R PMID: 10411267 best DB hits: BLAST: gb:AAB71784.1; (U95165) FlgF [Agrobacterium tumefaciens]; E=1e-17 ddbj:BAB06168.1; (AP001515) flagellar hook protein [Bacillus; E=1e-16 swissprot:Q06171; FLGF_CAUCR FLAGELLAR BASAL-BODY ROD PROTEIN FLGF; E=3e-16 COG: BH2449; COG1749 Flagellar basal body and hook proteins; E=1e-17 PFAM: PF00460; Flagella basal body rod protein; E=0.00036; FlgF complement(6570608..6571429) Rhodopirellula baltica SH 1 1791356 NP_870358.1 CDS RB12183 NC_005027.1 6571799 6573556 R PMID: 10984043 best DB hits: BLAST: pir:F82960; hypothetical protein PA5487 [imported] - Pseudomonas; E=8e-27 pir:A71678; probable response regulatory protein RP237 - Rickettsia; E=7e-22 pir:C83247; hypothetical protein PA3177 [imported] - Pseudomonas; E=2e-21 COG: PA5487; COG2199 Diguanylate cyclase/phosphodiesterase domain 1; E=8e-28 PFAM: PF00990; GGDEF domain; E=2.8e-45; hypothetical protein complement(6571799..6573556) Rhodopirellula baltica SH 1 1796786 NP_870359.1 CDS RB12188 NC_005027.1 6573557 6573865 D hypothetical protein 6573557..6573865 Rhodopirellula baltica SH 1 1789973 NP_870360.1 CDS RB12189 NC_005027.1 6573875 6574369 D hypothetical protein 6573875..6574369 Rhodopirellula baltica SH 1 1789944 NP_870361.1 CDS RB12190 NC_005027.1 6574386 6574535 D hypothetical protein 6574386..6574535 Rhodopirellula baltica SH 1 1794475 NP_870362.1 CDS RB12191 NC_005027.1 6574497 6575870 R best DB hits: BLAST: pir:T16625; asparagine synthase (glutamine-hydrolyzing) (EC 6.3.5.4); E=0.030 gb:AAC25799.1; (AF022973) Contains similarity to Pfam domain:; E=0.29 ddbj:BAB05227.1; (AP001512) asparagine synthetase [Bacillus; E=0.39 PFAM: PF00733; Asparagine synthase; E=0.75; asparagine synthase complement(6574497..6575870) Rhodopirellula baltica SH 1 1792558 NP_870363.1 CDS RB12193 NC_005027.1 6575867 6575977 R hypothetical protein complement(6575867..6575977) Rhodopirellula baltica SH 1 1790136 NP_870364.1 CDS hemH NC_005027.1 6575974 6576972 R catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(6575974..6576972) Rhodopirellula baltica SH 1 1793161 NP_870365.1 CDS RB12196 NC_005027.1 6576929 6577078 R hypothetical protein complement(6576929..6577078) Rhodopirellula baltica SH 1 1792746 NP_870366.1 CDS infC NC_005027.1 6577129 6577659 R PMID: 9784136 PMID: 1457399 best DB hits: BLAST: pir:A71465; probable translation initiation factor IF-3 - Chlamydia; E=3e-28 swissprot:O84840; IF3_CHLTR TRANSLATION INITIATION FACTOR IF-3; E=4e-27 pir:C81727; translation initiation factor 3 TC0221 [imported] -; E=7e-27 COG: CT833; COG0290 Translation initiation factor IF3; E=3e-29 PFAM: PF00707; Translation initiation factor IF-3; E=1.4e-74; translation initiation factor IF-3 complement(6577129..6577659) Rhodopirellula baltica SH 1 1795211 NP_870367.1 CDS RB12199 NC_005027.1 6577614 6577778 D hypothetical protein 6577614..6577778 Rhodopirellula baltica SH 1 1793829 NP_870368.1 CDS RB12200 NC_005027.1 6577800 6577955 R hypothetical protein complement(6577800..6577955) Rhodopirellula baltica SH 1 1790597 NP_870369.1 CDS RB12201 NC_005027.1 6577952 6578161 R best DB hits: BLAST: embl:CAB71199.1; (AL138538) sugar hydrolase; E=0.77; hypothetical protein complement(6577952..6578161) Rhodopirellula baltica SH 1 1793483 NP_870370.1 CDS RB12202 NC_005027.1 6578185 6579810 R PMID: 9082984 best DB hits: BLAST: swissprot:P55636; Y4RC_RHISN INTEGRASERECOMBINASE Y4RC; E=1e-04 pir:D72312; integrase-recombinase - Thermotoga maritima; E=2e-04 gb:AAF64651.1; AF200320_1 (AF200320) IntA [Bradyrhizobium; E=3e-04 COG: TM0967; COG0582 Integrase; E=2e-05 PFAM: PF00589; Phage integrase; E=4.8e-15; integrase-recombinase complement(6578185..6579810) Rhodopirellula baltica SH 1 1793854 NP_870371.1 CDS RB12204 NC_005027.1 6579810 6580163 R hypothetical protein complement(6579810..6580163) Rhodopirellula baltica SH 1 1794294 NP_870372.1 CDS RB12205 NC_005027.1 6580225 6580875 R best DB hits: PFAM: PF01381; Helix-turn-helix; E=8.3e-05; hypothetical protein complement(6580225..6580875) Rhodopirellula baltica SH 1 1794678 NP_870373.1 CDS RB12206 NC_005027.1 6580879 6581034 R hypothetical protein complement(6580879..6581034) Rhodopirellula baltica SH 1 1790467 NP_870374.1 CDS RB12208 NC_005027.1 6581058 6581447 D hypothetical protein 6581058..6581447 Rhodopirellula baltica SH 1 1793297 NP_870375.1 CDS RB12209 NC_005027.1 6581329 6581661 R PMID: 11226165 best DB hits: BLAST: swissprot:Q57615; Y151_METJA HYPOTHETICAL TRANSCRIPTIONAL; E=0.77 PFAM: PF00356; Bacterial regulatory proteins,; E=0.089 PF01325; Iron dependent repressor, N-te; E=0.048; transcriptional regulator complement(6581329..6581661) Rhodopirellula baltica SH 1 1794781 NP_870376.1 CDS dnaB NC_005027.1 6581658 6582578 R PMID: 6323420 best DB hits: BLAST: pir:E83029; replicative DNA helicase PA4931 [imported] - Pseudomonas; E=6e-04 swissprot:Q9ZJM5; DNAB_HELPJ REPLICATIVE DNA HELICASE -----; E=0.002 gb:AAK00231.1; AF229444_1 (AF229444) replicative DNA helicase DnaB; E=0.003 COG: PA4931; COG0305 Replicative DNA helicase; E=6e-05 PFAM: PF00772; DnaB-like helicase; E=4.3e-05; replicative DNA helicase complement(6581658..6582578) Rhodopirellula baltica SH 1 1793648 NP_870377.1 CDS RB12213 NC_005027.1 6582575 6583543 R hypothetical protein complement(6582575..6583543) Rhodopirellula baltica SH 1 1796793 NP_870378.1 CDS RB12214 NC_005027.1 6583543 6584118 R hypothetical protein complement(6583543..6584118) Rhodopirellula baltica SH 1 1795418 NP_870379.1 CDS RB12215 NC_005027.1 6584102 6584611 R hypothetical protein complement(6584102..6584611) Rhodopirellula baltica SH 1 1793821 NP_870380.1 CDS RB12217 NC_005027.1 6584735 6584932 R hypothetical protein complement(6584735..6584932) Rhodopirellula baltica SH 1 1795760 NP_870381.1 CDS RB12219 NC_005027.1 6584993 6586411 R hypothetical protein complement(6584993..6586411) Rhodopirellula baltica SH 1 1792501 NP_870382.1 CDS RB12220 NC_005027.1 6586512 6587027 R hypothetical protein complement(6586512..6587027) Rhodopirellula baltica SH 1 1796856 NP_870383.1 CDS RB12221 NC_005027.1 6586973 6587167 R hypothetical protein complement(6586973..6587167) Rhodopirellula baltica SH 1 1791305 NP_870384.1 CDS RB12223 NC_005027.1 6587469 6588230 D hypothetical protein 6587469..6588230 Rhodopirellula baltica SH 1 1795490 NP_870385.1 CDS RB12227 NC_005027.1 6588366 6588806 R best DB hits: BLAST: pir:T35737; probable integral membrane protein - Streptomyces; E=0.006; hypothetical protein complement(6588366..6588806) Rhodopirellula baltica SH 1 1789936 NP_870386.1 CDS RB12229 NC_005027.1 6588840 6589403 R hypothetical protein complement(6588840..6589403) Rhodopirellula baltica SH 1 1791286 NP_870387.1 CDS RB12231 NC_005027.1 6589721 6590035 R hypothetical protein complement(6589721..6590035) Rhodopirellula baltica SH 1 1790397 NP_870388.1 CDS RB12232 NC_005027.1 6590023 6590160 D hypothetical protein 6590023..6590160 Rhodopirellula baltica SH 1 1794556 NP_870389.1 CDS RB12233 NC_005027.1 6590157 6590510 D hypothetical protein 6590157..6590510 Rhodopirellula baltica SH 1 1791998 NP_870390.1 CDS RB12234 NC_005027.1 6590661 6590993 R hypothetical protein complement(6590661..6590993) Rhodopirellula baltica SH 1 1791463 NP_870391.1 CDS RB12236 NC_005027.1 6590935 6591546 D hypothetical protein 6590935..6591546 Rhodopirellula baltica SH 1 1789971 NP_870392.1 CDS osmY NC_005027.1 6591383 6593143 D PMID: 1317380 best DB hits: BLAST: swissprot:P27291; OSMY_ECOLI OSMOTICALLY INDUCIBLE PROTEIN Y; E=4e-05 gb:AAG59556.1; AE005668_11 (AE005668) hyperosmotically inducible; E=8e-05 gb:AAD56642.1; AF178441_1 (AF178441) Smc22-1 [Sinorhizobium; E=2e-04 COG: osmY; COG2823 Predicted periplasmic or secreted lipoprotein; E=4e-06; osmotically inducible protein Y 6591383..6593143 Rhodopirellula baltica SH 1 1793963 NP_870393.1 CDS RB12239 NC_005027.1 6593334 6594635 D PMID: 9043130 best DB hits: BLAST: gb:AAD45539.1; U70376_1 (U70376) InsA [Streptomyces netropsis]; E=5e-33 gb:AAG60893.1; AF322013_12 (AF322013) ID460 [Bradyrhizobium; E=8e-33 ddbj:BAA19966.1; (D63923) transposase [Acetobacter pasteurianus]; E=1e-26; transposase 6593334..6594635 Rhodopirellula baltica SH 1 1793151 NP_870394.1 CDS RB12240 NC_005027.1 6594646 6594798 D hypothetical protein 6594646..6594798 Rhodopirellula baltica SH 1 1792520 NP_870395.1 CDS RB12241 NC_005027.1 6594886 6596139 R best DB hits: BLAST: pdb:1DBO; A Chain A, Crystal Structure Of Chondroitinase B -----; E=0.049; chondroitinase B complement(6594886..6596139) Rhodopirellula baltica SH 1 1793736 NP_870396.1 CDS RB12243 NC_005027.1 6596256 6596423 D hypothetical protein 6596256..6596423 Rhodopirellula baltica SH 1 1792775 NP_870397.1 CDS RB12245 NC_005027.1 6596420 6596815 D hypothetical protein 6596420..6596815 Rhodopirellula baltica SH 1 1794989 NP_870398.1 CDS RB12247 NC_005027.1 6596824 6597048 R best DB hits: BLAST: gb:AAG19657.1; (AE005054) Vng1314h [Halobacterium sp. NRC-1]; E=3e-12; hypothetical protein complement(6596824..6597048) Rhodopirellula baltica SH 1 1794319 NP_870399.1 CDS RB12250 NC_005027.1 6597248 6597562 D PMID: 10952301 best DB hits: BLAST: pir:H82471; hypothetical protein VCA0329 VCA0298 VCA0343; E=4e-11; hypothetical protein 6597248..6597562 Rhodopirellula baltica SH 1 1791098 NP_870400.1 CDS RB12251 NC_005027.1 6597559 6599262 R PMID: 7768826 best DB hits: BLAST: swissprot:P46358; RFAY_XANCP PROBABLE RNA POLYMERASE SIGMA FACTOR; E=2e-22 ddbj:BAB03982.1; (AP001507) RNA polymerase ECF-type sigma factor; E=7e-15 swissprot:Q45585; SIGW_BACSU RNA POLYMERASE SIGMA FACTOR SIGW; E=4e-14 COG: BH0263; COG1595 DNA-directed RNA polymerase specialized sigma; E=6e-16 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=6.8e-12; RNA polymerase ECF-type sigma factor complement(6597559..6599262) Rhodopirellula baltica SH 1 1789937 NP_870401.1 CDS RB12255 NC_005027.1 6599415 6599696 R hypothetical protein complement(6599415..6599696) Rhodopirellula baltica SH 1 1795425 NP_870402.1 CDS RB12256 NC_005027.1 6599656 6600402 R best DB hits: BLAST: pir:S32217; hypothetical protein 2 - Bacillus megaterium -----; E=4e-16 pir:A82542; conserved hypothetical protein XF2574 [imported] -; E=5e-14 pir:D75404; phosphatidylglycerophosphatase B-related protein -; E=4e-13 COG: XF2574; COG0671 Membrane-associated phospholipid phosphatase; E=5e-15 PFAM: PF01569; PAP2 superfamily; E=1.4e-30; membrane-associated phospholipid phosphatase complement(6599656..6600402) Rhodopirellula baltica SH 1 1794797 NP_870403.1 CDS RB12260 NC_005027.1 6600532 6600777 R signal peptide complement(6600532..6600777) Rhodopirellula baltica SH 1 1791782 NP_870404.1 CDS fhp NC_005027.1 6600710 6601963 D flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine; nitric oxide dioxygenase 6600710..6601963 Rhodopirellula baltica SH 1 1794152 NP_870405.1 CDS RB12264 NC_005027.1 6602070 6602405 D PMID: 9371463 best DB hits: BLAST: pir:D69060; hypothetical protein MTH1452 - Methanobacterium; E=5e-12 gb:AAG09974.1; AF248038_3 (AF248038) unknown [Streptococcus; E=5e-10 pir:D70381; hypothetical protein aq_943 - Aquifex aeolicus -----; E=0.017 COG: MTH1452; COG1917 Uncharacterized ACR, double-stranded beta-helix; E=5e-13; hypothetical protein 6602070..6602405 Rhodopirellula baltica SH 1 1792993 NP_870406.1 CDS RB12265 NC_005027.1 6602402 6602530 R hypothetical protein complement(6602402..6602530) Rhodopirellula baltica SH 1 1796871 NP_870407.1 CDS RB12266 NC_005027.1 6602558 6602755 D hypothetical protein 6602558..6602755 Rhodopirellula baltica SH 1 1791416 NP_870408.1 CDS RB12267 NC_005027.1 6602697 6602951 D PMID: 8824840 best DB hits: BLAST: pir:JC4545; hypothetical 7.9k protein - Barophilic bacterium; E=4e-18 ddbj:BAA11902.1; (D83386) ORF1 [Shewanella violacea]; E=3e-17 ddbj:BAA25109.1; (D88194) pressure-regulated ORF1 [Mariana; E=0.006; pressure-regulated protein 6602697..6602951 Rhodopirellula baltica SH 1 1790386 NP_870409.1 CDS RB12268 NC_005027.1 6602929 6603069 R hypothetical protein complement(6602929..6603069) Rhodopirellula baltica SH 1 1794761 NP_870410.1 CDS RB12269 NC_005027.1 6603109 6603225 R hypothetical protein complement(6603109..6603225) Rhodopirellula baltica SH 1 1793434 NP_870411.1 CDS RB12271 NC_005027.1 6603241 6604980 D signal peptide 6603241..6604980 Rhodopirellula baltica SH 1 1791275 NP_870412.1 CDS RB12276 NC_005027.1 6605112 6605444 D PMID: 11759840 best DB hits: BLAST: gb:AAC04411.1; (AF047657) F37B4.8 gene product [Caenorhabditis; E=0.22; hypothetical protein 6605112..6605444 Rhodopirellula baltica SH 1 1792059 NP_870413.1 CDS RB12278 NC_005027.1 6605390 6605548 D hypothetical protein 6605390..6605548 Rhodopirellula baltica SH 1 1794763 NP_870414.1 CDS RB12279 NC_005027.1 6605545 6606558 R PMID: 11296222 best DB hits: BLAST: pir:S76700; hypothetical protein - Synechocystis sp. (strain PCC; E=1e-41 pir:F75546; conserved hypothetical protein - Deinococcus radiodurans; E=3e-09 gb:AAG19543.1; (AE005044) Vng1164c [Halobacterium sp. NRC-1]; E=9e-08 COG: slr0109; COG0668 Small-conductance mechanosensitive channel; E=9e-43 PA5022; COG3264 Small-conductance mechanosensitive channel; E=2e-05 TP0822; COG0668 Small-conductance mechanosensitive channel; E=3e-05 PFAM: PF00924; Uncharacterized protein family UPF00; E=2.1e-24; small-conductance mechanosensitive channel complement(6605545..6606558) Rhodopirellula baltica SH 1 1792661 NP_870415.1 CDS RB12281 NC_005027.1 6606519 6607739 R hypothetical protein complement(6606519..6607739) Rhodopirellula baltica SH 1 1792665 NP_870416.1 CDS RB12282 NC_005027.1 6607884 6609191 R best DB hits: BLAST: embl:CAB83202.1; (AJ277117) membrane protein; E=4e-35 pir:H82825; transport protein XF0281 [imported] - Xylella fastidiosa; E=8e-26 swissprot:O34472; YRRI_BACSU HYPOTHETICAL 39.6 KDA PROTEIN IN; E=2e-13 COG: XF0281; COG0628 Predicted permease; E=7e-27 PFAM: PF01594; Domain of unknown function DUF20; E=0.3; permease complement(6607884..6609191) Rhodopirellula baltica SH 1 1794249 NP_870417.1 CDS RB12283 NC_005027.1 6609220 6609378 D hypothetical protein 6609220..6609378 Rhodopirellula baltica SH 1 1792858 NP_870418.1 CDS RB12285 NC_005027.1 6609391 6610065 D PMID: 10484179 best DB hits: BLAST: ddbj:BAB05775.1; (AP001514) BH2056~unknown conserved protein in; E=1e-12 pir:T45542; hypothetical protein [imported] - Klebsiella pneumoniae; E=1e-08 gb:AAG10237.1; AF201699_2 (AF201699) phospholipid; E=6e-05 COG: BH2056; COG0030 Dimethyladenosine transferase (rRNA methylation); E=1e-13 Rv2622; COG0500 SAM-dependent methyltransferases; E=6e-04; dimethyladenosine transferase (rRNA methylation) 6609391..6610065 Rhodopirellula baltica SH 1 1795630 NP_870419.1 CDS RB12286 NC_005027.1 6610120 6610293 R hypothetical protein complement(6610120..6610293) Rhodopirellula baltica SH 1 1790266 NP_870420.1 CDS RB12287 NC_005027.1 6610364 6611110 D best DB hits: PFAM: PF00339; Arrestin (or S-antigen), N-terminal; E=0.73; signal peptide 6610364..6611110 Rhodopirellula baltica SH 1 1791091 NP_870421.1 CDS RB12289 NC_005027.1 6611074 6611199 R hypothetical protein complement(6611074..6611199) Rhodopirellula baltica SH 1 1793949 NP_870422.1 CDS pntB NC_005027.1 6611214 6612575 R PMID: 3525165 PMID: 1633824 best DB hits: BLAST: prf:2102322C; energy-transducing nicotinamide nucleotide; E=5e-91 pir:T18520; transhydrogenase homolog 7B2 - Eimeria tenella -----; E=1e-88 pir:A81885; probable NAD(P)+ transhydrogenase (B-specific) (EC; E=1e-87 COG: NMB0978; COG1282 NAD/NADP transhydrogenase beta subunit; E=6e-88 PFAM: PF02233; NAD(P) transhydrogenase beta subunit; E=1.1e-206; NAD(P) transhydrogenase subunit beta complement(6611214..6612575) Rhodopirellula baltica SH 1 1795469 NP_870423.1 CDS RB12291 NC_005027.1 6612572 6612871 R PMID: 3525165 PMID: 1633824 best DB hits: BLAST: pir:G70618; probable pntAB protein - Mycobacterium tuberculosis; E=1e-09 pir:S77433; NAD(P)+ transhydrogenase (B-specific) (EC 1.6.1.1) alpha; E=2e-08 prf:2102322B; energy-transducing nicotinamide nucleotide; E=7e-07 COG: Rv0156; COG3288 NAD/NADP transhydrogenase alpha subunit; E=1e-10; NAD(P) transhydrogenase subunit alpha complement(6612572..6612871) Rhodopirellula baltica SH 1 1791575 NP_870424.1 CDS pntA NC_005027.1 6612905 6614041 R PMID: 3525165 PMID: 1633824 best DB hits: BLAST: prf:2102322A; energy-transducing nicotinamide nucleotide; E=8e-76 pir:S77433; NAD(P)+ transhydrogenase (B-specific) (EC 1.6.1.1) alpha; E=9e-74 gb:AAK00588.1; (AY026033) pyridine nucleotide transhydrogenase; E=1e-72 COG: slr1239; COG3288 NAD/NADP transhydrogenase alpha subunit; E=9e-75 BH2329; COG0686 Alanine dehydrogenase; E=4e-26 PFAM: PF01266; D-amino acid oxidase; E=0.05 PF00070; Pyridine nucleotide-disulphide oxid; E=0.00011 PF01262; Alanine dehydrogenase/pyridine nucl; E=5.4e-89; NAD(P) transhydrogenase subunit alpha complement(6612905..6614041) Rhodopirellula baltica SH 1 1789934 NP_870425.1 CDS RB12295 NC_005027.1 6614190 6614450 D hypothetical protein 6614190..6614450 Rhodopirellula baltica SH 1 1793269 NP_870426.1 CDS RB12296 NC_005027.1 6614403 6615422 R PMID: 2583128 best DB hits: BLAST: pir:F75374; probable ketoacyl reductase - Deinococcus radiodurans; E=4e-49 gb:AAF18286.1; (AF088897) oxidoreductase; orf4 [Zymomonas; E=5e-25 swissprot:P37694; HETN_ANASP KETOACYL REDUCTASE HETN -----; E=2e-22 COG: DR1620; COG1028 Dehydrogenases with different specificities (related; E=4e-50 slr0315; COG1028 Dehydrogenases with different specificities; E=5e-21 PA1537; COG1028 Dehydrogenases with different specificities (related; E=8e-21 PFAM: PF00106; short chain dehydrogenase; E=3.2e-61; ketoacyl reductase complement(6614403..6615422) Rhodopirellula baltica SH 1 1793683 NP_870427.1 CDS RB12297 NC_005027.1 6615598 6616107 D hypothetical protein 6615598..6616107 Rhodopirellula baltica SH 1 1796901 NP_870428.1 CDS RB12301 NC_005027.1 6616214 6616765 D PMID: 9371463 best DB hits: BLAST: pir:D69230; hypothetical protein MTH974 - Methanobacterium; E=0.81; hypothetical protein 6616214..6616765 Rhodopirellula baltica SH 1 1792499 NP_870429.1 CDS RB12303 NC_005027.1 6616882 6618759 R best DB hits: BLAST: pir:H69064; serinethreonine protein kinase related protein -; E=3e-04 gb:AAG20856.1; (AE005154) Vng6189h [Halobacterium sp. NRC-1]; E=0.007 gb:AAF16758.1; AC010155_11 (AC010155) F3M18.23 [Arabidopsis; E=0.014 COG: MTH1485; COG1520 Uncharacterized proteins of WD40-like repeat family; E=3e-05 PFAM: PF01011; PQQ enzyme repeat; E=0.0074; serine/threonine protein kinase related protein complement(6616882..6618759) Rhodopirellula baltica SH 1 1794181 NP_870430.1 CDS RB12305 NC_005027.1 6618856 6620247 R PMID: 10048488 best DB hits: BLAST: ddbj:BAB10826.1; (AB016892) receptor protein kinase-like protein; E=0.011 embl:CAB51834.1; (AJ243961) contains eukaryotic protein kinase; E=0.057 gb:AAG50525.1; AC084221_7 (AC084221) hypothetical protein; E=0.28; receptor protein kinase-like protein complement(6618856..6620247) Rhodopirellula baltica SH 1 1793952 NP_870431.1 CDS RB12310 NC_005027.1 6620454 6622730 R PMID: 1835671 PMID: 7768349 best DB hits: BLAST: swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=2e-35 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=2e-35 pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=1e-32 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=2e-36 PFAM: PF00069; Protein kinase domain; E=8.9e-53; serine/threonine-protein kinase complement(6620454..6622730) Rhodopirellula baltica SH 1 1795325 NP_870432.1 CDS RB12312 NC_005027.1 6622715 6622885 R hypothetical protein complement(6622715..6622885) Rhodopirellula baltica SH 1 1792709 NP_870433.1 CDS RB12313 NC_005027.1 6622846 6623412 R PMID: 11936079 PMID: 3052291 best DB hits: BLAST: embl:CAB72200.1; (AL138851) RNA polymerase sigma factor; E=0.060 PFAM: PF00196; Bacterial regulatory proteins; E=0.59; extracytoplasmic sigma factor ECF complement(6622846..6623412) Rhodopirellula baltica SH 1 1795669 NP_870434.1 CDS RB12314 NC_005027.1 6623400 6623609 R hypothetical protein complement(6623400..6623609) Rhodopirellula baltica SH 1 1796867 NP_870435.1 CDS maa NC_005027.1 6623653 6624207 D PMID: 1856235 best DB hits: BLAST: ddbj:BAB06720.1; (AP001517) maltose transacetylase (maltose; E=3e-44 swissprot:P37515; MAA_BACSU PROBABLE MALTOSE O-ACETYLTRANSFERASE; E=1e-43 swissprot:P77791; MAA_ECOLI MALTOSE O-ACETYLTRANSFERASE (MALTOSE; E=3e-40 COG: BH3001; COG0110 Acetyltransferases (the isoleucine patch; E=3e-45 ylaD; COG0110 Acetyltransferases (the isoleucine patch superfamily); E=3e-41 YJL218w; COG0110 Acetyltransferases (the isoleucine patch; E=3e-34 PFAM: PF00132; Bacterial transferase hexapeptide (f; E=0.62; maltose O-acetyltransferase 6623653..6624207 Rhodopirellula baltica SH 1 1795885 NP_870436.1 CDS RB12316 NC_005027.1 6624359 6625243 R best DB hits: BLAST: pir:A70081; conserved hypothetical protein yxkH - Bacillus subtilis; E=0.24 gb:AAK00156.1; AF222753_11 (AF222753) nodulation; E=0.50 pir:T50960; related to nodulation protein nodB [imported] -; E=0.69 PFAM: PF01522; Polysaccharide deacetylase; E=0.0074; chitooligosaccharide deacetylase complement(6624359..6625243) Rhodopirellula baltica SH 1 1792777 NP_870437.1 CDS RB12317 NC_005027.1 6625234 6625413 D hypothetical protein 6625234..6625413 Rhodopirellula baltica SH 1 1793673 NP_870438.1 CDS RB12318 NC_005027.1 6625398 6625565 R hypothetical protein complement(6625398..6625565) Rhodopirellula baltica SH 1 1791096 NP_870439.1 CDS RB12319 NC_005027.1 6625514 6626077 R hypothetical protein complement(6625514..6626077) Rhodopirellula baltica SH 1 1795335 NP_870440.1 CDS RB12320 NC_005027.1 6625565 6625924 D signal peptide 6625565..6625924 Rhodopirellula baltica SH 1 1793084 NP_870441.1 CDS RB12321 NC_005027.1 6626069 6626974 D hypothetical protein 6626069..6626974 Rhodopirellula baltica SH 1 1794597 NP_870442.1 CDS RB12323 NC_005027.1 6627001 6627747 D PMID: 10567266 best DB hits: BLAST: pir:F75410; conserved hypothetical protein - Deinococcus radiodurans; E=0.084; hypothetical protein 6627001..6627747 Rhodopirellula baltica SH 1 1790638 NP_870443.1 CDS RB12324 NC_005027.1 6627713 6627901 R hypothetical protein complement(6627713..6627901) Rhodopirellula baltica SH 1 1794773 NP_870444.1 CDS RB12325 NC_005027.1 6627940 6629529 D PMID: 7910580 best DB hits: BLAST: swissprot:P50428; ARSA_MOUSE ARYLSULFATASE A PRECURSOR (ASA); E=7e-41 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=1e-40 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=1e-40 COG: aslA; COG3119 Arylsulfatase A and related enzymes; E=3e-26 PFAM: PF00884; Sulfatase; E=4.1e-39; arylsulfatase 6627940..6629529 Rhodopirellula baltica SH 1 1793734 NP_870445.1 CDS RB12326 NC_005027.1 6629618 6631774 D PMID: 11406410 best DB hits: BLAST: gb:AAA98756.1; (L29642) sensor kinase [Pseudomonas fluorescens]; E=2e-45 pir:F83153; probable two-component sensor PA3946 [imported] -; E=3e-36 pir:E83265; probable two-component sensor PA3044 [imported] -; E=2e-35 COG: PA3044; COG0642 Sensory transduction histidine kinases; E=2e-36 PFAM: PF01590; GAF domain; E=3.2e-20 PF00989; PAS domain; E=1.2e-07 PF00512; His Kinase A (phosphoacceptor) d; E=4.8e-16; sensory histidine protein kinase 6629618..6631774 Rhodopirellula baltica SH 1 1792750 NP_870446.1 CDS pepT2 NC_005027.1 6631858 6633918 R PMID: 8639691 best DB hits: BLAST: swissprot:Q63424; PET2_RAT OLIGOPEPTIDE TRANSPORTER, KIDNEY; E=4e-47 prf:2113198A; Hpeptide cotransporter [Homo sapiens]; E=7e-47 gb:AAF66614.1; AF142441_1 (AF142441) H+oligopeptide symporter; E=1e-46 COG: YKR093w; COG3104 Dipeptide/tripeptide permease; E=2e-24 PFAM: PF00854; POT family; E=6.4e-42; oligopeptide transporter, kidney isoform complement(6631858..6633918) Rhodopirellula baltica SH 1 1793153 NP_870447.1 CDS RB12328 NC_005027.1 6633929 6634276 D hypothetical protein 6633929..6634276 Rhodopirellula baltica SH 1 1796143 NP_870448.1 CDS RB12329 NC_005027.1 6634234 6634566 D hypothetical protein 6634234..6634566 Rhodopirellula baltica SH 1 1793666 NP_870449.1 CDS RB12331 NC_005027.1 6634742 6635035 D hypothetical protein 6634742..6635035 Rhodopirellula baltica SH 1 1794557 NP_870450.1 CDS RB12333 NC_005027.1 6635037 6635258 R hypothetical protein complement(6635037..6635258) Rhodopirellula baltica SH 1 1790576 NP_870451.1 CDS RB12334 NC_005027.1 6635356 6636156 R best DB hits: BLAST: gb:AAB90905.1; (AE001082) conserved hypothetical protein; E=4e-06 embl:CAB59505.1; (AL132648) hypothetical protein SCI41.35c; E=6e-05 pir:A69209; conserved hypothetical protein MTH816 - Methanobacterium; E=0.001 COG: AF0332_1; COG1994 Zn-dependent proteases; E=6e-06; Zn-dependent protease complement(6635356..6636156) Rhodopirellula baltica SH 1 1796842 NP_870452.1 CDS RB12337 NC_005027.1 6636309 6638588 R PMID: 8370677 best DB hits: BLAST: pir:B75267; prolyl endopeptidase - Deinococcus radiodurans (strain; E=0.0 gb:AAD34991.1; (AF143951) prolyl endopeptidase [Aeromonas; E=1e-173 gb:AAF02211.1; (AF065429) prolyl endopeptidase [Aeromonas; E=1e-173 COG: DR2503; COG1505 Serine proteases of the peptidase S9A; E=0.0 PA1304; COG1770 Protease II (serine protease PtrB); E=7e-45 NMB1877; COG1505 Serine proteases of the peptidase S9A; E=2e-38 PFAM: PF02897; Prolyl oligopeptidase, N-termi; E=2.7e-149 PF00326; Prolyl oligopeptidase; E=2.6e-40; prolyl endopeptidase complement(6636309..6638588) Rhodopirellula baltica SH 1 1791314 NP_870453.1 CDS RB12338 NC_005027.1 6638649 6639182 R hypothetical protein complement(6638649..6639182) Rhodopirellula baltica SH 1 1789930 NP_870454.1 CDS RB12340 NC_005027.1 6639175 6640056 R hypothetical protein complement(6639175..6640056) Rhodopirellula baltica SH 1 1793176 NP_870455.1 CDS RB12342 NC_005027.1 6640053 6640721 R hypothetical protein complement(6640053..6640721) Rhodopirellula baltica SH 1 1793423 NP_870456.1 CDS RB12343 NC_005027.1 6640732 6642447 R PMID: 1368718 best DB hits: BLAST: swissprot:P76041; SUCP_ECOLI SUCROSE PHOSPHORYLASE; E=1e-123 pir:H64879; probable membrane protein b1309 - Escherichia coli; E=1e-123 ddbj:BAA14878.1; (D90768) Sucrose phosphorylase (EC 2.4.1.7); E=1e-121 COG: ycjM; COG0366 Glycosidases; E=1e-124 PFAM: PF00128; Alpha amylase, catalytic domain; E=0.0025; sucrose phosphorylase complement(6640732..6642447) Rhodopirellula baltica SH 1 1795265 NP_870457.1 CDS RB12344 NC_005027.1 6642444 6643721 R best DB hits: BLAST: pir:G72278; hypothetical protein - Thermotoga maritima (strain MSB8); E=5e-43 ddbj:BAA25653.1; (AB005901) deduced glucosyltransferase; E=1e-07 pir:F64500; probable hexosyltransferase (EC 2.4.1.-) MJ1607 -; E=7e-05 COG: TM1230; COG0438 Predicted glycosyltransferases; E=5e-44 PFAM: PF02843; Phosphoribosylglycinamide syn; E=0.45 PF00534; Glycosyl transferases group 1; E=0.018; glycosyltransferase complement(6642444..6643721) Rhodopirellula baltica SH 1 1793373 NP_870458.1 CDS RB12347 NC_005027.1 6643767 6644741 R PMID: 7826004 best DB hits: BLAST: pir:G75522; hydrolase, CbbYCbbZ/GpH/YieH family - Deinococcus; E=0.045 swissprot:Q94915; REG2_DROME RHYTHMICALLY EXPRESSED GENE 2 PROTEIN; E=0.14 pir:E75169; hypothetical protein PAB2019 - Pyrococcus abyssi (strain; E=0.15 COG: DR0414; COG1011 Predicted hydrolases of the HAD superfamily; E=0.004 PFAM: PF00702; haloacid dehalogenase-like hydrolas; E=2e-07; hydrolase complement(6643767..6644741) Rhodopirellula baltica SH 1 1793607 NP_870459.1 CDS fxsA NC_005027.1 6644738 6645520 R PMID: 10497016 PMID: 11932238 best DB hits: BLAST: pir:E82044; fxsA protein VC2696 [imported] - Vibrio cholerae (group; E=0.013 ddbj:BAB06881.1; (AP001517) BH3162~unknown conserved protein; E=0.14 pir:C70004; conserved hypothetical protein ytzA - Bacillus subtilis; E=0.84 COG: VC2696; COG3030 Uncharacterized ACR; E=0.001; inner membrane protein FxsA complement(6644738..6645520) Rhodopirellula baltica SH 1 1797094 NP_870460.1 CDS RB12351 NC_005027.1 6645317 6649282 D PMID: 1646017 best DB hits: BLAST: embl:CAA57910.1; (X82563) c-type cytochrome [Synechocystis sp.]; E=0.77 PFAM: PF00034; Cytochrome c; E=5.6e-05; cytochrome C 6645317..6649282 Rhodopirellula baltica SH 1 1792629 NP_870461.1 CDS fliN NC_005027.1 6649396 6649830 R PMID: 2651416 best DB hits: BLAST: swissprot:P35539; FLIN_ERWCA FLAGELLAR MOTOR SWITCH PROTEIN FLIN; E=2e-04 swissprot:P15070; FLIN_ECOLI FLAGELLAR MOTOR SWITCH PROTEIN FLIN; E=5e-04 swissprot:P26419; FLIN_SALTY FLAGELLAR MOTOR SWITCH PROTEIN FLIN; E=5e-04 COG: TM0680a; COG1886 Flagellar motor switch/type III secretory pathway; E=2e-06 PFAM: PF01052; Surface presentation of antigens (SP; E=2.3e-07; flagellar motor switch protein fliN [fragment] complement(6649396..6649830) Rhodopirellula baltica SH 1 1793377 NP_870462.1 CDS RB12359 NC_005027.1 6649876 6650223 R hypothetical protein complement(6649876..6650223) Rhodopirellula baltica SH 1 1794825 NP_870463.1 CDS RB12360 NC_005027.1 6650263 6651828 R PMID: 3112519 PMID: 2117666 best DB hits: BLAST: pir:A27286; levanase (EC 3.2.1.65) precursor - Bacillus subtilis; E=3e-54 swissprot:P05656; SACC_BACSU LEVANASE PRECURSOR; E=3e-54 prf:1404371A; levanase [Bacillus subtilis]; E=3e-54 COG: BS_sacC; COG1621 Beta-fructosidases (levanase/invertase); E=3e-55 PFAM: PF00251; Glycosyl hydrolases family 32; E=4.6e-10 PF02012; BNR repeat; E=0.81 PF00251; Glycosyl hydrolases family 32; E=3.1e-15; levanase precursor complement(6650263..6651828) Rhodopirellula baltica SH 1 1793438 NP_870464.1 CDS RB12361 NC_005027.1 6651815 6652870 D PMID: 1850730 best DB hits: BLAST: swissprot:Q55480; YZ37_SYNY3 HYPOTHETICAL SUGAR KINASE SLR0537; E=5e-55 gb:AAG10458.1; AF279106_20 (AF279106) predicted ribokinase; E=1e-42 gb:AAK00437.1; AC060755_7 (AC060755) adenosine kinase; E=1e-40 COG: slr0537; COG0524 Sugar kinases, ribokinase; E=4e-56 PFAM: PF00294; pfkB family carbohydrate kinase; E=2.7e-54; ribokinase sugar kinase 6651815..6652870 Rhodopirellula baltica SH 1 1793368 NP_870465.1 CDS RB12362 NC_005027.1 6652962 6653786 R best DB hits: BLAST: pir:S74867; hypothetical protein sll1159 - Synechocystis sp. (strain; E=2e-23 pir:T36936; hypothetical protein SCJ1.03c - Streptomyces coelicolor; E=1e-17 pir:E72332; thioredoxin peroxidase (EC 1.11.1.-) TM0780 [similarity]; E=1e-05 COG: sll1159; COG1225 Peroxiredoxins; E=2e-24 DR2242; COG0450 Thiol - alkyl hydroperoxide reductases; E=4e-04 bcp; COG1225 Peroxiredoxins; E=4e-04; peroxiredoxin complement(6652962..6653786) Rhodopirellula baltica SH 1 1792305 NP_870466.1 CDS pcrA NC_005027.1 6653839 6656202 R PMID: 8419285 best DB hits: BLAST: gb:AAK05218.1; AE006344_7 (AE006344) ATP-dependent helicase PcrA; E=1e-131 swissprot:Q53727; PCRA_STAAU ATP-DEPENDENT DNA HELICASE PCRA; E=1e-127 swissprot:Q9S3Q0; PCRA_LEUCI ATP-DEPENDENT DNA HELICASE PCRA; E=1e-127 COG: BS_yerF; COG0210 Superfamily I DNA and RNA helicases; E=1e-127 PFAM: PF00580; UvrD/REP helicase; E=2.4e-177; ATP-dependent DNA helicase complement(6653839..6656202) Rhodopirellula baltica SH 1 1792614 NP_870467.1 CDS RB12367 NC_005027.1 6656322 6658331 R best DB hits: PFAM: PF00428; 60s Acidic ribosomal protein; E=0.77; hypothetical protein complement(6656322..6658331) Rhodopirellula baltica SH 1 1794829 NP_870468.1 CDS RB12371 NC_005027.1 6658301 6658555 D hypothetical protein 6658301..6658555 Rhodopirellula baltica SH 1 1790808 NP_870469.1 CDS RB12372 NC_005027.1 6658702 6659430 D PMID: 7889934 best DB hits: BLAST: ddbj:BAB03982.1; (AP001507) RNA polymerase ECF-type sigma factor; E=4e-15 swissprot:Q45585; SIGW_BACSU RNA POLYMERASE SIGMA FACTOR SIGW; E=3e-13 swissprot:Q06198; RPSH_PSEAE RNA POLYMERASE SIGMA-H FACTOR; E=1e-11 COG: BH0263; COG1595 DNA-directed RNA polymerase specialized sigma; E=4e-16 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=5.4e-10 PF00140; Sigma-70 factor; E=0.53; RNA polymerase ECF-type sigma factor 6658702..6659430 Rhodopirellula baltica SH 1 1794037 NP_870470.1 CDS RB12375 NC_005027.1 6659741 6661081 D best DB hits: PFAM: PF02728; Copper amine oxidase, N3 doma; E=0.86; hypothetical protein 6659741..6661081 Rhodopirellula baltica SH 1 1792736 NP_870471.1 CDS ksgA NC_005027.1 6661109 6661963 R PMID: 3122846 best DB hits: BLAST: swissprot:P37468; KSGA_BACSU DIMETHYLADENOSINE TRANSFERASE; E=5e-39 ddbj:BAB03776.1; (AP001507) dimethyladenosine transferase; E=3e-38 gb:AAK04788.1; AE006302_6 (AE006302) kasugamycin; E=8e-38 COG: BS_ksgA; COG0030 Dimethyladenosine transferase (rRNA methylation); E=4e-40 PFAM: PF00398; Ribosomal RNA adenine dimethylases; E=4.9e-50; dimethyladenosine transferase complement(6661109..6661963) Rhodopirellula baltica SH 1 1794377 NP_870472.2 CDS ribE NC_005027.1 6662086 6662760 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(6662086..6662760) Rhodopirellula baltica SH 1 1796846 NP_870473.1 CDS eno NC_005027.1 6662966 6664252 D PMID: 8021172 best DB hits: BLAST: ddbj:BAB07275.1; (AP001519) enolase (2-phosphoglycerate; E=1e-144 pir:A41835; phosphopyruvate hydratase (EC 4.2.1.11) - Bacillus; E=1e-139 swissprot:P37869; ENO_BACSU ENOLASE (2-PHOSPHOGLYCERATE; E=1e-139 COG: BH3556; COG0148 Enolase; E=1e-145 PFAM: PF00113; Enol-ase; E=7e-245; enolase 6662966..6664252 Rhodopirellula baltica SH 1 1794203 NP_870474.1 CDS RB12382 NC_005027.1 6664210 6664485 R hypothetical protein complement(6664210..6664485) Rhodopirellula baltica SH 1 1790148 NP_870475.1 CDS RB12383 NC_005027.1 6664501 6664767 R hypothetical protein complement(6664501..6664767) Rhodopirellula baltica SH 1 1794368 NP_870476.1 CDS RB12385 NC_005027.1 6664867 6665670 D hypothetical protein 6664867..6665670 Rhodopirellula baltica SH 1 1792591 NP_870477.1 CDS RB12386 NC_005027.1 6665667 6665852 D hypothetical protein 6665667..6665852 Rhodopirellula baltica SH 1 1790277 NP_870478.1 CDS RB12387 NC_005027.1 6665742 6665894 R hypothetical protein complement(6665742..6665894) Rhodopirellula baltica SH 1 1792287 NP_870479.1 CDS RB12388 NC_005027.1 6665905 6667206 R best DB hits: BLAST: gb:AAD45539.1; U70376_1 (U70376) InsA [Streptomyces netropsis]; E=5e-33 gb:AAG60893.1; AF322013_12 (AF322013) ID460 [Bradyrhizobium; E=8e-33 ddbj:BAA19966.1; (D63923) transposase [Acetobacter pasteurianus]; E=1e-26; transposase complement(6665905..6667206) Rhodopirellula baltica SH 1 1791238 NP_870480.1 CDS RB12390 NC_005027.1 6667344 6668063 R signal peptide complement(6667344..6668063) Rhodopirellula baltica SH 1 1795705 NP_870481.1 CDS RB12391 NC_005027.1 6668003 6668407 R hypothetical protein complement(6668003..6668407) Rhodopirellula baltica SH 1 1794818 NP_870482.1 CDS RB12392 NC_005027.1 6668436 6668543 R hypothetical protein complement(6668436..6668543) Rhodopirellula baltica SH 1 1793772 NP_870483.1 CDS RB12393 NC_005027.1 6668555 6670561 R best DB hits: BLAST: gb:AAD05531.1; (AF083240) c-type cytochrome precursor [Shewanella; E=0.013; c-type cytochrome precursor complement(6668555..6670561) Rhodopirellula baltica SH 1 1793650 NP_870484.1 CDS RB12395 NC_005027.1 6670572 6670730 R hypothetical protein complement(6670572..6670730) Rhodopirellula baltica SH 1 1793981 NP_870485.1 CDS RB12396 NC_005027.1 6670697 6670870 R hypothetical protein complement(6670697..6670870) Rhodopirellula baltica SH 1 1796919 NP_870486.1 CDS RB12398 NC_005027.1 6670928 6672013 R hypothetical protein complement(6670928..6672013) Rhodopirellula baltica SH 1 1795322 NP_870487.1 CDS RB12400 NC_005027.1 6672196 6673551 R best DB hits: BLAST: pir:G70414; conserved hypothetical protein aq_1327 - Aquifex; E=1e-08 pir:G72297; conserved hypothetical protein - Thermotoga maritima; E=5e-08 pir:T34718; probable integral membrane protein - Streptomyces; E=9e-07 COG: aq_1327; COG0705 Uncharacterized membrane protein (homolog of; E=1e-09 PFAM: PF01694; Rhomboid family; E=3.1e-12; hypothetical protein complement(6672196..6673551) Rhodopirellula baltica SH 1 1794375 NP_870488.1 CDS RB12403 NC_005027.1 6673562 6673741 R hypothetical protein complement(6673562..6673741) Rhodopirellula baltica SH 1 1790012 NP_870489.1 CDS RB12404 NC_005027.1 6673728 6674021 R hypothetical protein complement(6673728..6674021) Rhodopirellula baltica SH 1 1791291 NP_870490.1 CDS nupG NC_005027.1 6674037 6675587 D PMID: 3311747 best DB hits: BLAST: gb:AAG57155.1; AE005436_2 (AE005436) nucleoside permease; E=5e-53 swissprot:P76417; YEGT_ECOLI NUCLEOSIDE TRANSPORTER YEGT; E=8e-53 pir:C65082; nucleoside-transporting protein nupG - Escherichia coli; E=6e-30 COG: yegT; COG0477 Permeases of the major facilitator superfamily; E=7e-54; nucleoside-transport system protein 6674037..6675587 Rhodopirellula baltica SH 1 1791004 NP_870491.1 CDS RB12407 NC_005027.1 6675588 6675797 R hypothetical protein complement(6675588..6675797) Rhodopirellula baltica SH 1 1795889 NP_870492.1 CDS RB12408 NC_005027.1 6675635 6675814 D hypothetical protein 6675635..6675814 Rhodopirellula baltica SH 1 1795545 NP_870493.1 CDS RB12409 NC_005027.1 6675757 6678855 D PMID: 10216867 best DB hits: BLAST: gb:AAD30859.1; AF116251_2 (AF116251) BatB [Bacteroides fragilis]; E=0.007; hypothetical protein 6675757..6678855 Rhodopirellula baltica SH 1 1795691 NP_870494.1 CDS RB12414 NC_005027.1 6678852 6679049 D signal peptide 6678852..6679049 Rhodopirellula baltica SH 1 1792919 NP_870495.1 CDS RB12415 NC_005027.1 6679150 6679572 R PMID: 10484179 best DB hits: BLAST: gb:AAG18715.1; (AE004976) Vng0080h [Halobacterium sp. NRC-1]; E=2e-04 ddbj:BAB07426.1; (AP001519) acetobutylicum phosphotransbutyrylase; E=0.005; hypothetical protein complement(6679150..6679572) Rhodopirellula baltica SH 1 1790629 NP_870496.1 CDS RB12416 NC_005027.1 6679578 6680456 D signal peptide 6679578..6680456 Rhodopirellula baltica SH 1 1792932 NP_870497.1 CDS RB12419 NC_005027.1 6680453 6680932 D PMID: 1567863 best DB hits: BLAST: pir:S20974; hypothetical protein 178 - Escherichia coli; E=4e-34 swissprot:P30134; YFHC_ECOLI HYPOTHETICAL 20.0 KD PROTEIN IN; E=4e-34 gb:AAG57673.1; AE005486_4 (AE005486) deaminase; E=4e-34 COG: yfhC; COG0590 Cytosine/adenosine deaminases; E=4e-35 PFAM: PF00383; Cytidine and deoxycytidylate de; E=1.7e-37; cytosine deaminase 6680453..6680932 Rhodopirellula baltica SH 1 1793180 NP_870498.1 CDS RB12421 NC_005027.1 6680963 6682504 D PMID: 2065652 PMID: 1905979 best DB hits: BLAST: gb:AAF82144.1; AC034256_8 (AC034256) Contains similarity to F-box; E=3e-15 gb:AAG17034.1; AF187980_1 (AF187980) Partner of Paired [Drosophila; E=8e-09 embl:CAB95333.1; (AL359782) possible adenylate cyclase; E=2e-06; adenylate cyclase 6680963..6682504 Rhodopirellula baltica SH 1 1795850 NP_870499.1 CDS RB12422 NC_005027.1 6682504 6683076 D PMID: 12004073; hypothetical protein 6682504..6683076 Rhodopirellula baltica SH 1 1792694 NP_870500.1 CDS RB12424 NC_005027.1 6683073 6684026 D PMID: 1550672 best DB hits: BLAST: pir:A82682; ion transporter XF1426 [imported] - Xylella fastidiosa; E=1e-48 pir:E75470; probable ion transporter - Deinococcus radiodurans; E=5e-42 pir:B83459; probable potassium channel PA1496 [imported] -; E=1e-36 COG: XF1426; COG1226 Kef-type K+ transport systems, predicted NAD-binding; E=1e-49 APE0955; COG1226 Kef-type K+ transport systems, predicted; E=7e-09 BH3340; COG1226 Kef-type K+ transport systems, predicted NAD-binding; E=4e-05 PFAM: PF01145; SPFH domain / Band 7 family; E=0.42 PF00520; Ion transport protein; E=5.1e-21; potassium channel 6683073..6684026 Rhodopirellula baltica SH 1 1792546 NP_870501.1 CDS RB12426 NC_005027.1 6684059 6684472 D hypothetical protein 6684059..6684472 Rhodopirellula baltica SH 1 1791251 NP_870502.1 CDS RB12427 NC_005027.1 6684475 6684645 R hypothetical protein complement(6684475..6684645) Rhodopirellula baltica SH 1 1793261 NP_870503.1 CDS RB12428 NC_005027.1 6684618 6685586 R PMID: 9537320 best DB hits: BLAST: pir:B70374; conserved hypothetical protein aq_854 - Aquifex aeolicus; E=0.20 pir:E69078; conserved hypothetical protein MTH1585 -; E=0.34 ddbj:BAB05388.1; (AP001512) BH1669~unknown conserved protein; E=0.58 PFAM: PF00515; TPR Domain; E=0.15; hypothetical protein complement(6684618..6685586) Rhodopirellula baltica SH 1 1792758 NP_870504.1 CDS RB12429 NC_005027.1 6685569 6686255 D hypothetical protein 6685569..6686255 Rhodopirellula baltica SH 1 1789966 NP_870505.1 CDS RB12431 NC_005027.1 6686283 6687857 R PMID: [EscherichiacoliO157:H7] best DB hits: BLAST: gb:AAF32278.1; (AF211192) SULF1 [Drosophila melanogaster]; E=7e-13 gb:AAG58881.1; AE005599_13 (AE005599) sulfatase; E=1e-12 gb:AAF55296.1; (AE003712) Sulf1 gene product [Drosophila; E=8e-12 COG: PA0031; COG3119 Arylsulfatase A and related enzymes; E=3e-12 PFAM: PF00884; Sulfatase; E=5.6e-14; sulfatase complement(6686283..6687857) Rhodopirellula baltica SH 1 1796768 NP_870506.1 CDS RB12432 NC_005027.1 6687862 6689526 R PMID: 7910580 best DB hits: BLAST: swissprot:P50428; ARSA_MOUSE ARYLSULFATASE A PRECURSOR (ASA); E=5e-36 gb:AAC27821.1; (AF013158) arylsulfatase [Heliocidaris; E=7e-36 embl:CAA34667.1; (X16679) arylsulfatase [Hemicentrotus; E=1e-35 COG: aslA; COG3119 Arylsulfatase A and related enzymes; E=8e-28 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=0.001 VNG1337C; COG3119 Arylsulfatase A and related enzymes; E=0.004 PFAM: PF00884; Sulfatase; E=2.2e-39; arylsulfatase complement(6687862..6689526) Rhodopirellula baltica SH 1 1789969 NP_870507.1 CDS ogt NC_005027.1 6689629 6691671 R PMID: 9083067 best DB hits: BLAST: gb:AAF55179.1; (AE003708) CG5038 gene product [Drosophila; E=5e-28 swissprot:P56558; OGT1_RAT UDP-N-ACETYLGLUCOSAMINE--PEPTIDE; E=3e-27 gb:AAD38597.1; AF145622_1 (AF145622) BcDNA.GH04245 [Drosophila; E=2e-25 COG: MTH83; COG0457 TPR-repeat-containing proteins; E=2e-20 PFAM: PF00515; TPR Domain; E=6.4e-07; O-GlcNAc transferase complement(6689629..6691671) Rhodopirellula baltica SH 1 1794813 NP_870508.1 CDS mntB NC_005027.1 6691668 6693116 R PMID: 7743991 best DB hits: BLAST: pir:E69992; conserved hypothetical protein ytgD - Bacillus subtilis; E=3e-41 ddbj:BAB05109.1; (AP001511) BH1390~unknown conserved protein in; E=2e-32 gb:AAD56938.1; AF180520_3 (AF180520) integral membrane protein; E=3e-28 COG: BS_ytgD; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease; E=3e-42 Rv2788; COG1321 Mn-dependent transcriptional regulator; E=3e-10 BH1395; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease; E=5e-10 PFAM: PF00950; ABC 3 transport family; E=1.1e-17 PF02742; Iron dependent repressor, metal; E=2.9e-10; manganese ABC transporter permease complement(6691668..6693116) Rhodopirellula baltica SH 1 1794586 NP_870509.1 CDS mntB NC_005027.1 6693113 6694447 R PMID: 7743991 best DB hits: BLAST: pir:D69992; ABC transporter (membrane protein) homolog ytgC -; E=8e-45 pir:B71357; probable ABC transporter, permease (troC) -; E=5e-22 pir:A72089; integral membrane protein - Chlamydophila pneumoniae; E=4e-21 COG: BS_ytgC; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease; E=8e-46 CPn0347_2; COG1321 Mn-dependent transcriptional regulator; E=2e-07 TM0125; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease; E=3e-07 PFAM: PF00950; ABC 3 transport family; E=1.6e-72 PF02742; Iron dependent repressor, metal; E=1.6e-07; manganese ABC transporter permease complement(6693113..6694447) Rhodopirellula baltica SH 1 1791749 NP_870510.1 CDS mntA NC_005027.1 6694447 6695289 R PMID: 7743991 best DB hits: BLAST: pir:C69992; ABC transporter (ATP-binding protein) homolog ytgB -; E=3e-73 pir:A71357; probable ABC transporter ATP-binding protein (troB) -; E=1e-70 pir:T45470; ATP-binding ABC transport protein [imported] -; E=9e-58 COG: BS_ytgB; COG1121 ABC-type Mn/Zn transport systems, ATPase component; E=3e-74 BS_yfmF; COG1120 ABC-type cobalamin/Fe3+-siderophores transport; E=8e-24 PH1653; COG1121 ABC-type Mn/Zn transport systems, ATPase component; E=5e-23 PFAM: PF02463; SMC domain N terminal domain; E=0.17 PF00005; ABC transporter; E=7.9e-50; manganese transport system ATP-binding protein complement(6694447..6695289) Rhodopirellula baltica SH 1 1793600 NP_870511.1 CDS RB12439 NC_005027.1 6695437 6695571 R hypothetical protein complement(6695437..6695571) Rhodopirellula baltica SH 1 1792753 NP_870512.1 CDS mtsA NC_005027.1 6695599 6696699 R PMID: 7743991 best DB hits: BLAST: pir:B69992; ABC transporter (membrane protein) homolog ytgA -; E=7e-66 pdb:1TOA; A Chain A, Periplasmic Zinc Binding Protein Troa From; E=3e-50 gb:AAA92353.1; (U16363) Tromp1 [Treponema pallidum]; E=3e-50 COG: BS_ytgA; COG0803 ABC-type Mn/Zn transport system, periplasmic; E=7e-67 PFAM: PF01297; Periplasmic solute binding prot; E=3.6e-103; manganese ABC transporter substrate binding protein complement(6695599..6696699) Rhodopirellula baltica SH 1 1790406 NP_870513.1 CDS nudF NC_005027.1 6696666 6697445 R PMID: 9694840 best DB hits: BLAST: pir:G69041; mutator MutT protein - Methanobacterium; E=3e-07 swissprot:Q58549; ADPP_METJA ADP-RIBOSE PYROPHOSPHATASE; E=9e-07 embl:CAC12694.1; (AJ272115) hypothetical protein [Thauera; E=2e-06 COG: MTH1315; COG1051 ADP-ribose pyrophosphatase; E=3e-08 BH1893; COG0494 NTP pyrophosphohydrolases including oxidative damage; E=3e-07 VC0331; COG2816 NTP pyrophosphohydrolases containing a Zn-finger,; E=3e-06 PFAM: PF01165; Ribosomal protein S21; E=0.52 PF00293; MutT-like domain; E=1e-25; ADP-ribose pyrophosphatase complement(6696666..6697445) Rhodopirellula baltica SH 1 1791237 NP_870514.1 CDS RB12442 NC_005027.1 6697442 6698977 R hypothetical protein complement(6697442..6698977) Rhodopirellula baltica SH 1 1796898 NP_870515.1 CDS RB12444 NC_005027.1 6698983 6699558 D hypothetical protein 6698983..6699558 Rhodopirellula baltica SH 1 1793410 NP_870516.1 CDS tmk NC_005027.1 6699486 6700223 D PMID: 2017365 best DB hits: BLAST: pir:T36663; protein kinase, transmembrane - Streptomyces coelicolor; E=8e-28 pir:B81173; thymidylate kinase NMB0670 [imported] - Neisseria; E=1e-27 pir:H81932; probable dTMP kinase (EC 2.7.4.9) NMA0869 [imported] -; E=3e-27 COG: NMB0670; COG0125 Thymidylate kinase; E=1e-28 PFAM: PF02223; Thymidylate kinase; E=1.3e-62; thymidylate kinase 6699486..6700223 Rhodopirellula baltica SH 1 1795298 NP_870517.1 CDS RB12447 NC_005027.1 6700272 6700583 D hypothetical protein 6700272..6700583 Rhodopirellula baltica SH 1 1793932 NP_870518.1 CDS RB12449 NC_005027.1 6700689 6701000 R signal peptide complement(6700689..6701000) Rhodopirellula baltica SH 1 1794413 NP_870519.1 CDS RB12450 NC_005027.1 6701097 6701561 R signal peptide complement(6701097..6701561) Rhodopirellula baltica SH 1 1789975 NP_870520.1 CDS RB12451 NC_005027.1 6701635 6702552 R hypothetical protein complement(6701635..6702552) Rhodopirellula baltica SH 1 1791125 NP_870521.1 CDS RB12452 NC_005027.1 6702485 6702946 R hypothetical protein complement(6702485..6702946) Rhodopirellula baltica SH 1 1793707 NP_870522.1 CDS RB12454 NC_005027.1 6703048 6703647 R hypothetical protein complement(6703048..6703647) Rhodopirellula baltica SH 1 1792820 NP_870523.1 CDS RB12455 NC_005027.1 6703744 6704238 R hypothetical protein complement(6703744..6704238) Rhodopirellula baltica SH 1 1795019 NP_870524.1 CDS RB12456 NC_005027.1 6704266 6704664 R PMID: 8132648 best DB hits: BLAST: pir:B53522; 20k cyclophilin - Toxoplasma gondii (fragment) -----; E=0.056; cyclophilin complement(6704266..6704664) Rhodopirellula baltica SH 1 1792913 NP_870525.1 CDS RB12458 NC_005027.1 6704719 6704976 D hypothetical protein 6704719..6704976 Rhodopirellula baltica SH 1 1793022 NP_870526.1 CDS RB12459 NC_005027.1 6705119 6706069 R PMID: 8300537 best DB hits: BLAST: pir:D82385; mannitol operon repressor VCA1047 [imported] - Vibrio; E=6e-04 gb:AAD45387.1; AF166095_3 (AF166095) mtl operon repressor; E=0.12 swissprot:P36563; MTLR_ECOLI MANNITOL OPERON REPRESSOR (MANNITOL; E=0.28; mannitol operon repressor complement(6705119..6706069) Rhodopirellula baltica SH 1 1794733 NP_870527.1 CDS RB12460 NC_005027.1 6706103 6707170 R hypothetical protein complement(6706103..6707170) Rhodopirellula baltica SH 1 1795260 NP_870528.1 CDS RB12461 NC_005027.1 6707206 6708942 R best DB hits: PFAM: PF02205; WH2 motif; E=0.86; signal peptide complement(6707206..6708942) Rhodopirellula baltica SH 1 1796894 NP_870529.1 CDS RB12464 NC_005027.1 6709081 6710172 R PMID: 10952301 best DB hits: BLAST: pir:C82490; probable potassium channel protein VCA0194 [imported] -; E=0.039 COG: VCA0194; COG1226 Kef-type K+ transport systems, predicted; E=0.004; potassium channel protein complement(6709081..6710172) Rhodopirellula baltica SH 1 1792656 NP_870530.1 CDS RB12468 NC_005027.1 6710136 6712169 R best DB hits: PFAM: PF00520; Ion transport protein; E=1.8e-05 PF01578; Cytochrome C assembly protein; E=0.81; signal peptide complement(6710136..6712169) Rhodopirellula baltica SH 1 1792377 NP_870531.1 CDS RB12471 NC_005027.1 6712185 6712442 R hypothetical protein complement(6712185..6712442) Rhodopirellula baltica SH 1 1796840 NP_870532.1 CDS RB12473 NC_005027.1 6712524 6712706 D hypothetical protein 6712524..6712706 Rhodopirellula baltica SH 1 1792254 NP_870533.1 CDS RB12475 NC_005027.1 6712706 6715966 D hypothetical protein 6712706..6715966 Rhodopirellula baltica SH 1 1796792 NP_870534.1 CDS RB12477 NC_005027.1 6716008 6717072 D hypothetical protein 6716008..6717072 Rhodopirellula baltica SH 1 1796816 NP_870535.1 CDS RB12479 NC_005027.1 6716985 6717557 R hypothetical protein complement(6716985..6717557) Rhodopirellula baltica SH 1 1792605 NP_870536.1 CDS ribA NC_005027.1 6717554 6718774 R PMID: 9297088 best DB hits: BLAST: ddbj:BAB05275.1; (AP001512) GTP cyclohydrolase II 3,; E=1e-106 swissprot:P51695; GCH2_BACAM RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBA; E=1e-103 swissprot:P17620; GCH2_BACSU RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBA; E=1e-103 COG: BH1556_2; COG0807 GTP cyclohydrolase II; E=7e-51 BH1556_1; COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase; E=2e-48 ribA; COG0807 GTP cyclohydrolase II; E=2e-48 PFAM: PF00926; 3,4-dihydroxy-2-butanone 4-ph; E=5.7e-83 PF00925; GTP cyclohydrolase II; E=2.5e-89; riboflavin biosynthesis protein RibA complement(6717554..6718774) Rhodopirellula baltica SH 1 1792440 NP_870537.1 CDS RB12482 NC_005027.1 6718870 6720036 D PMID: 1907455 best DB hits: BLAST: pir:B75555; probable lipaseesterase - Deinococcus radiodurans; E=1e-19 pdb:1EVQ; A Chain A, The Crystal Structure Of The Thermophilic; E=6e-12 pir:H70731; probable esterase - Mycobacterium tuberculosis (strain; E=5e-11 COG: DR0133; COG0657 Acetyl esterase; E=1e-20 XF2260; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; E=1e-04 aes; COG0657 Acetyl esterase; E=5e-04; lipase/esterase 6718870..6720036 Rhodopirellula baltica SH 1 1795288 NP_870538.1 CDS RB12484 NC_005027.1 6720078 6721052 R best DB hits: PFAM: PF00892; Integral membrane protein DUF6; E=0.67; hypothetical protein complement(6720078..6721052) Rhodopirellula baltica SH 1 1794602 NP_870539.1 CDS RB12485 NC_005027.1 6720957 6721193 D hypothetical protein 6720957..6721193 Rhodopirellula baltica SH 1 1791432 NP_870540.1 CDS RB12486 NC_005027.1 6721197 6722753 D PMID: 7768349 best DB hits: BLAST: pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=4e-44 pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=4e-40 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=2e-39 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=4e-45 PFAM: PF00069; Protein kinase domain; E=1.7e-55; serine/threonine protein kinase 6721197..6722753 Rhodopirellula baltica SH 1 1790045 NP_870541.1 CDS RB12487 NC_005027.1 6722743 6724590 R hypothetical protein complement(6722743..6724590) Rhodopirellula baltica SH 1 1792742 NP_870542.1 CDS RB12489 NC_005027.1 6724867 6725928 D best DB hits: PFAM: PF02537; CrcB-like protein; E=0.22; signal peptide 6724867..6725928 Rhodopirellula baltica SH 1 1795511 NP_870543.1 CDS RB12492 NC_005027.1 6725922 6726260 R hypothetical protein complement(6725922..6726260) Rhodopirellula baltica SH 1 1794076 NP_870544.1 CDS fliK NC_005027.1 6726361 6728091 R PMID: 1828465 best DB hits: BLAST: ddbj:BAB06171.1; (AP001515) BH2452~unknown conserved protein; E=0.067 pir:T14405; small GTP-binding protein rab-1 - turnip ----- gb:; E=0.076 swissprot:P23451; FLIK_BACSU PROBABLE FLAGELLAR HOOK-LENGTH; E=0.082 COG: BH2452; COG3144 Flagellar hook-length control protein; E=0.006; flagellar hook-length control protein FliK complement(6726361..6728091) Rhodopirellula baltica SH 1 1790216 NP_870545.1 CDS RB12497 NC_005027.1 6728092 6728742 R best DB hits: PFAM: PF02895; Signal transducing histidine kin; E=0.61; hypothetical protein complement(6728092..6728742) Rhodopirellula baltica SH 1 1796848 NP_870546.1 CDS fliJ NC_005027.1 6728739 6729221 R PMID: 1904439 best DB hits: BLAST: swissprot:P20487; FLIJ_BACSU FLAGELLAR FLIJ PROTEIN (CHEMOTAXIS; E=0.012 COG: BS_fliJ; COG2882 Flagellar biosynthesis chaperone; E=0.001; flagellar FliJ protein complement(6728739..6729221) Rhodopirellula baltica SH 1 1790509 NP_870547.1 CDS fliI NC_005027.1 6729263 6730666 R PMID: 1828465 best DB hits: BLAST: pir:D72404; flagellum-specific ATP synthase - Thermotoga maritima; E=1e-108 ddbj:BAB06174.1; (AP001515) flagellar-specific ATP synthase; E=1e-106 swissprot:P23445; FLII_BACSU FLAGELLUM-SPECIFIC ATP SYNTHASE; E=1e-103 COG: TM0218; COG1157 Flagellar biosynthesis/type III secretory pathway; E=1e-109 atpD; COG0055 F0F1-type ATP synthase beta subunit; E=2e-37 PFAM: PF00005; ABC transporter; E=0.024 PF00006; ATP synthase alpha/beta family,; E=4e-131; flagellum-specific ATP synthase complement(6729263..6730666) Rhodopirellula baltica SH 1 1793258 NP_870548.1 CDS RB12501 NC_005027.1 6730663 6731535 R best DB hits: PFAM: PF02361; Cobalt transport protein; E=0.17; hypothetical protein complement(6730663..6731535) Rhodopirellula baltica SH 1 1792684 NP_870549.1 CDS fliG NC_005027.1 6731537 6732844 R PMID: 10440379 best DB hits: BLAST: swissprot:Q9WY63; FLIG_THEMA FLAGELLAR MOTOR SWITCH PROTEIN FLIG; E=7e-08 pir:G71328; probable flagellar motor switch protein (fliG-2) -; E=6e-07 gb:AAF35852.1; AF220006_1 (AF220006) lateral flagellar motor; E=2e-06 COG: TM0220; COG1536 Flagellar motor switch protein; E=7e-09; flagellar motor switch protein FliG complement(6731537..6732844) Rhodopirellula baltica SH 1 1793415 NP_870550.1 CDS RB12504 NC_005027.1 6732841 6733089 R hypothetical protein complement(6732841..6733089) Rhodopirellula baltica SH 1 1791880 NP_870551.1 CDS RB12506 NC_005027.1 6733068 6733505 D PMID: 9266669 best DB hits: BLAST: ddbj:BAB05255.1; (AP001512) anti-sigma F factor antagonist (stage; E=0.003 pir:S75220; hypothetical protein slr1912 - Synechocystis sp. (strain; E=0.024 COG: BH1536; COG1366 Anti-anti-sigma regulatory factor (antagonist of; E=3e-04 PFAM: PF01740; STAS domain; E=4.9e-06; anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 6733068..6733505 Rhodopirellula baltica SH 1 1791759 NP_870552.1 CDS RB12509 NC_005027.1 6733502 6734209 D PMID: 1528845 best DB hits: BLAST: pir:T30898; receptor-like histidine kinase - Rhodococcus erythropolis; E=6e-08 pir:T28694; hypothetical protein - Streptomyces coelicolor -----; E=1e-07 pir:T28655; receptor-like histidine kinase BpdS - Rhodococcus sp; E=2e-07 COG: narQ; COG0642 Sensory transduction histidine kinases; E=2e-08 PFAM: PF02518; Histidine kinase-, DNA gyrase B-, p; E=1.9e-05; two-component sensor histidine kinase 6733502..6734209 Rhodopirellula baltica SH 1 1793966 NP_870553.1 CDS aroG NC_005027.1 6734262 6735314 R catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase complement(6734262..6735314) Rhodopirellula baltica SH 1 1794166 NP_870554.1 CDS RB12511 NC_005027.1 6735460 6736584 R PMID: 11016950 best DB hits: BLAST: gb:AAG18715.1; (AE004976) Vng0080h [Halobacterium sp. NRC-1]; E=0.018; hypothetical protein complement(6735460..6736584) Rhodopirellula baltica SH 1 1792400 NP_870555.1 CDS flgE NC_005027.1 6736607 6739042 R PMID: 10368149 best DB hits: BLAST: gb:AAD24206.1; AF049342_4 (AF049342) flagellar hook protein FlgE; E=8e-22 gb:AAA61738.1; (U19712) flagellar hook polypeptide [Borrelia; E=1e-21 gb:AAA91361.1; (U12870) flagellar distal rod protein [Borrelia; E=3e-21 COG: BB0283; COG1749 Flagellar basal body and hook proteins; E=5e-22 PFAM: PF00460; Flagella basal body rod protein; E=3.7e-10; flagellar hook protein FlgE complement(6736607..6739042) Rhodopirellula baltica SH 1 1793825 NP_870556.1 CDS flgD NC_005027.1 6739123 6739617 R PMID: 8049271 best DB hits: BLAST: gb:AAG25963.1; AF300968_5 (AF300968) FlgD [Sinorhizobium meliloti]; E=2e-05 gb:AAF14369.1; AF133240_3 (AF133240) flagellar scaffolding protein; E=3e-05 gb:AAA97475.1; (U51896) LfgD [Vibrio parahaemolyticus]; E=4e-05 COG: PA1079; COG1843 Flagellar hook capping protein; E=8e-06; basal-body rod modification protein FlgD complement(6739123..6739617) Rhodopirellula baltica SH 1 1790957 NP_870557.1 CDS RB12516 NC_005027.1 6739496 6741055 D hypothetical protein 6739496..6741055 Rhodopirellula baltica SH 1 1791554 NP_870558.1 CDS RB12518 NC_005027.1 6741089 6743266 D hypothetical protein 6741089..6743266 Rhodopirellula baltica SH 1 1790915 NP_870559.1 CDS RB12519 NC_005027.1 6743233 6744330 D signal peptide 6743233..6744330 Rhodopirellula baltica SH 1 1796100 NP_870560.1 CDS RB12521 NC_005027.1 6744279 6746459 D best DB hits: PFAM: PF02163; Sterol-regulatory element bindi; E=0.78 PF00364; Biotin-requiring enzyme; E=0.21 PF00358; phosphoenolpyruvate-dependent s; E=0.42; hypothetical protein 6744279..6746459 Rhodopirellula baltica SH 1 1795697 NP_870561.1 CDS RB12524 NC_005027.1 6746493 6747125 D best DB hits: BLAST: gb:AAG51290.1; AC027035_13 (AC027035) unknown protein [Arabidopsis; E=3e-08 gb:AAG51209.1; AC051630_6 (AC051630) peptide chain release factor,; E=1e-07 gb:AAF53262.1; (AE003639) CG5705 gene product [Drosophila; E=0.20; peptide chain release factor 6746493..6747125 Rhodopirellula baltica SH 1 1792859 NP_870562.1 CDS RB12526 NC_005027.1 6747132 6747902 D PMID: 10382966 best DB hits: BLAST: pir:G70414; conserved hypothetical protein aq_1327 - Aquifex; E=1e-30 pir:G72297; conserved hypothetical protein - Thermotoga maritima; E=1e-28 pir:T34718; probable integral membrane protein - Streptomyces; E=2e-26 COG: aq_1327; COG0705 Uncharacterized membrane protein (homolog of; E=1e-31 PFAM: PF01694; Rhomboid family; E=3e-30; hypothetical protein 6747132..6747902 Rhodopirellula baltica SH 1 1792938 NP_870563.1 CDS RB12528 NC_005027.1 6747917 6748945 D hypothetical protein 6747917..6748945 Rhodopirellula baltica SH 1 1796828 NP_870564.1 CDS RB12532 NC_005027.1 6749031 6750248 D PMID: 9634230 best DB hits: BLAST: swissprot:Q50644; YP77_MYCTU HYPOTHETICAL 57.3 KDA PROTEIN RV2577; E=9e-08 gb:AAF47971.1; (AE003484) CG1637 gene product [alt 1] [Drosophila; E=9e-06 gb:AAF47969.1; (AE003484) CG1637 gene product [alt 3] [Drosophila; E=6e-04 PFAM: PF02908; Purple acid phosphatase, N-ter; E=0.013 PF02227; Purple acid phosphatase; E=8.7e-08; phosphatase 6749031..6750248 Rhodopirellula baltica SH 1 1793242 NP_870565.1 CDS RB12533 NC_005027.1 6750299 6751594 D signal peptide 6750299..6751594 Rhodopirellula baltica SH 1 1790179 NP_870566.1 CDS RB12534 NC_005027.1 6751597 6754128 D signal peptide 6751597..6754128 Rhodopirellula baltica SH 1 1791866 NP_870567.1 CDS RB12537 NC_005027.1 6754144 6754302 D hypothetical protein 6754144..6754302 Rhodopirellula baltica SH 1 1795338 NP_870568.1 CDS RB12538 NC_005027.1 6754353 6756758 D signal peptide 6754353..6756758 Rhodopirellula baltica SH 1 1791394 NP_870569.1 CDS RB12541 NC_005027.1 6756939 6758414 D best DB hits: BLAST: swissprot:Q10801; DIPZ_MYCTU DIPZ PROTEIN ----- pir: E70923; E=3e-04 pir:E69891; cytochrome c biogenesis protein CycX homolog homolog; E=3e-04 pir:F75549; cytochrome c biogenesis protein CycX homolog DR0189; E=8e-04 COG: BS_yneN; COG0526 Thiol-disulfide isomerase and thioredoxins; E=3e-05 PFAM: PF00085; Thioredoxin; E=0.13; thioredoxin 6756939..6758414 Rhodopirellula baltica SH 1 1792670 NP_870570.1 CDS RB12543 NC_005027.1 6758519 6759514 R hypothetical protein complement(6758519..6759514) Rhodopirellula baltica SH 1 1793271 NP_870571.1 CDS RB12544 NC_005027.1 6759511 6761082 R best DB hits: BLAST: gb:AAB69633.1; (U82513) random slug cDNA25 protein [Dictyostelium; E=0.012; hypothetical protein complement(6759511..6761082) Rhodopirellula baltica SH 1 1794299 NP_870572.1 CDS RB12549 NC_005027.1 6761150 6762505 R best DB hits: BLAST: ddbj:BAB05490.1; (AP001513) BH1771~unknown conserved protein; E=3e-96 swissprot:P50840; YPSC_BACSU HYPOTHETICAL 43.5 KD PROTEIN IN; E=8e-88 gb:AAK05749.1; AE006395_9 (AE006395) HYPOTHETICAL PROTEIN; E=8e-72 COG: BH1771; COG0116 Predicted N6-adenine-specific DNA methylases; E=3e-97 PFAM: PF01170; Uncharacterized protein family UP; E=5.4e-113; N-6 adenine-specific DNA methylase complement(6761150..6762505) Rhodopirellula baltica SH 1 1794809 NP_870573.1 CDS RB12550 NC_005027.1 6762534 6762725 R hypothetical protein complement(6762534..6762725) Rhodopirellula baltica SH 1 1795431 NP_870574.1 CDS scd NC_005027.1 6762717 6763907 D PMID: 7929259 best DB hits: BLAST: ddbj:BAA03434.1; (D14581) fatty-acid desaturase [Anabaena; E=3e-44 gb:AAB61353.1; (U36390) delta-9 desaturase [Synechococcus sp. PCC; E=2e-42 gb:AAD00699.1; (U90417) delta 9 acyl-lipid fatty acid desaturase; E=4e-42 COG: sll0541; COG1398 Fatty-acid desaturase; E=7e-43 PFAM: PF01069; Fatty acid desaturase; E=1e-19; fatty-acid desaturase 6762717..6763907 Rhodopirellula baltica SH 1 1795336 NP_870575.1 CDS RB12554 NC_005027.1 6764163 6764378 D hypothetical protein 6764163..6764378 Rhodopirellula baltica SH 1 1794099 NP_870576.1 CDS RB12556 NC_005027.1 6764463 6765644 R PMID: 8843436 best DB hits: BLAST: embl:CAB56131.1; (AL117669) hypothetical protein [Streptomyces; E=1e-22 pir:T35709; hypothetical protein SC7H1.14 SC7H1.14 - Streptomyces; E=6e-16 pir:S13421; polymeric globin alpha - brine shrimp (fragment) -----; E=0.087; hypothetical protein complement(6764463..6765644) Rhodopirellula baltica SH 1 1790775 NP_870577.1 CDS RB12557 NC_005027.1 6765659 6765784 R hypothetical protein complement(6765659..6765784) Rhodopirellula baltica SH 1 1795693 NP_870578.1 CDS RB12558 NC_005027.1 6765837 6766604 D hypothetical protein 6765837..6766604 Rhodopirellula baltica SH 1 1795384 NP_870579.1 CDS nagA NC_005027.1 6766660 6767877 R PMID: 2668691 PMID: 2190615 best DB hits: BLAST: pir:C70845; probable nagA protein - Mycobacterium tuberculosis; E=2e-33 gb:AAK05433.1; AE006366_2 (AE006366); E=1e-32 gb:AAG58267.1; AE005542_9 (AE005542) ; E=2e-32 COG: Rv3332; COG1820 N-acetylglucosamine-6-phosphate deacetylase; E=2e-34 Ta1060; COG0402 Cytosine deaminase and related metal-dependent; E=0.001 yicP; COG1001 Adenine deaminase; E=0.002 PFAM: PF01979; Adenine deaminase; E=0.071 PF01685; Chlorohydrolase; E=0.002 PF01979; Adenine deaminase; E=8.9e-07; N-acetylglucosamine-6-phosphate deacetylase complement(6766660..6767877) Rhodopirellula baltica SH 1 1796095 NP_870580.1 CDS adh NC_005027.1 6767970 6769232 D PMID: 2001402 best DB hits: BLAST: swissprot:P28036; DHET_ACEPO ALCOHOL DEHYDROGENASE [ACCEPTOR]; E=0.003 gb:AAB89850.1; (AE001008) conserved hypothetical protein; E=0.003 swissprot:Q44002; DHET_ACEEU ALCOHOL DEHYDROGENASE [ACCEPTOR]; E=0.004 COG: AF1399; COG1520 Uncharacterized proteins of WD40-like repeat family; E=3e-04 PFAM: PF01011; PQQ enzyme repeat; E=5.5e-05; alcohol dehydrogenase 6767970..6769232 Rhodopirellula baltica SH 1 1792468 NP_870581.1 CDS RB12564 NC_005027.1 6769320 6770612 D best DB hits: BLAST: gb:AAC23913.1; (AF039207) NADH-dependent dehydrogenase homolog; E=1e-09 swissprot:O05389; YRBE_BACSU HYPOTHETICAL 37.8 KDA PROTEIN IN; E=6e-09 pir:D72381; dehydrogenase - Thermotoga maritima (strain MSB8); E=3e-07 COG: BS_yrbE; COG0673 Predicted dehydrogenases and related proteins; E=5e-10 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=3.4e-16; NADH-dependent dehydrogenase-like protein 6769320..6770612 Rhodopirellula baltica SH 1 1794285 NP_870582.1 CDS RB12566 NC_005027.1 6770624 6772111 R best DB hits: PFAM: PF00884; Sulfatase; E=0.63; sulfatase complement(6770624..6772111) Rhodopirellula baltica SH 1 1792233 NP_870583.1 CDS RB12567 NC_005027.1 6772108 6774933 R best DB hits: PFAM: PF02704; Gibberellin regulated protein; E=0.082 PF00034; Cytochrome c; E=0.79; hypothetical protein complement(6772108..6774933) Rhodopirellula baltica SH 1 1791599 NP_870584.1 CDS RB12570 NC_005027.1 6774854 6775450 D hypothetical protein 6774854..6775450 Rhodopirellula baltica SH 1 1791320 NP_870585.1 CDS RB12571 NC_005027.1 6775435 6776475 R PMID: 10567266 best DB hits: BLAST: pir:E75266; GGDEF family protein - Deinococcus radiodurans (strain; E=2e-27 gb:AAA87378.1; (L42554) pleD gene product [Caulobacter; E=2e-25 gb:AAD28578.1; AF121341_2 (AF121341) response regulator; E=3e-25 COG: DR2498; COG2199 Diguanylate cyclase/phosphodiesterase domain 1; E=2e-28 TM1594; COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF); E=7e-21 yddV_2; COG2199 Diguanylate cyclase/phosphodiesterase domain 1; E=9e-21 PFAM: PF00897; Orbivirus inner capsid protein VP7; E=0.89 PF00498; FHA domain; E=1.3e-19 PF00990; GGDEF domain; E=3.2e-60; GGDEF family protein complement(6775435..6776475) Rhodopirellula baltica SH 1 1796831 NP_870586.1 CDS RB12572 NC_005027.1 6776472 6778910 R PMID: 7768349 best DB hits: BLAST: pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=1e-32 gb:AAF73695.1; (AE002226) serinethreonine-protein kinase; E=3e-32 embl:CAA10713.1; (AJ132604) hypothetical protein [Lactococcus; E=1e-31 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=1e-33 PFAM: PF00069; Protein kinase domain; E=2.1e-33 PF00515; TPR Domain; E=0.017; serine/threonine-protein kinase complement(6776472..6778910) Rhodopirellula baltica SH 1 1793807 NP_870587.1 CDS RB12576 NC_005027.1 6778873 6779115 D hypothetical protein 6778873..6779115 Rhodopirellula baltica SH 1 1794799 NP_870588.1 CDS efp NC_005027.1 6779119 6779886 D translation elongation factor EF-P 6779119..6779886 Rhodopirellula baltica SH 1 1794970 NP_870589.1 CDS RB12580 NC_005027.1 6779930 6780121 R hypothetical protein complement(6779930..6780121) Rhodopirellula baltica SH 1 1793086 NP_870590.1 CDS RB12581 NC_005027.1 6780073 6780597 R hypothetical protein complement(6780073..6780597) Rhodopirellula baltica SH 1 1790793 NP_870591.1 CDS RB12583 NC_005027.1 6780591 6780791 D signal peptide 6780591..6780791 Rhodopirellula baltica SH 1 1792791 NP_870592.1 CDS RB12586 NC_005027.1 6780825 6781466 D hypothetical protein 6780825..6781466 Rhodopirellula baltica SH 1 1794200 NP_870593.1 CDS RB12588 NC_005027.1 6781485 6782735 R signal peptide complement(6781485..6782735) Rhodopirellula baltica SH 1 1791080 NP_870594.1 CDS RB12590 NC_005027.1 6782844 6784265 R PMID: 11157937 best DB hits: BLAST: swissprot:Q46638; AMSK_ERWAM AMYLOVORAN BIOSYNTHESIS PROTEIN AMSK; E=9e-14 ddbj:BAB07095.1; (AP001518) lipopolysaccharide biosynthesis; E=1e-13 pir:A82265; probable polysaccharide biosynthesis protein VC0925; E=3e-13 COG: BH3376; COG0438 Predicted glycosyltransferases; E=1e-14 PFAM: PF00534; Glycosyl transferases group 1; E=1.3e-32; hexosyltransferase complement(6782844..6784265) Rhodopirellula baltica SH 1 1790418 NP_870595.1 CDS RB12596 NC_005027.1 6784272 6784457 R hypothetical protein complement(6784272..6784457) Rhodopirellula baltica SH 1 1792728 NP_870596.1 CDS leuB NC_005027.1 6784428 6785555 D PMID: 3547331 best DB hits: BLAST: ddbj:BAB06776.1; (AP001517) 3-isopropylmalate dehydrogenase; E=1e-102 swissprot:P05645; LEU3_BACSU 3-ISOPROPYLMALATE DEHYDROGENASE; E=1e-101 pir:A26522; 3-isopropylmalate dehydrogenase (EC 1.1.1.85) - Bacillus; E=1e-100 COG: BH3057; COG0473 Isocitrate/isopropylmalate dehydrogenase; E=1e-103 PFAM: PF00180; Isocitrate and isopropylmalate dehyd; E=5.4e-201; 3-isopropylmalate dehydrogenase 6784428..6785555 Rhodopirellula baltica SH 1 1794330 NP_870597.1 CDS cdsA NC_005027.1 6785640 6786605 D PMID: 2995358 PMID: 2995359 best DB hits: BLAST: gb:AAK04086.1; (AE006236) unknown [Pasteurella multocida]; E=7e-53 pir:A83329; probable phosphatidate cytidylyltransferase PA2536; E=2e-51 pir:H82138; probable phosphatidate cytidylyltransferase VC1936; E=2e-32 COG: PA2536; COG0575 CDP-diglyceride synthetase; E=2e-52 PFAM: PF01148; Phosphatidate cytidylyltransf; E=5.5e-08; phosphatidate cytidylyltransferase 6785640..6786605 Rhodopirellula baltica SH 1 1795847 NP_870598.1 CDS RB12599 NC_005027.1 6786668 6787201 D PMID: 10567266 best DB hits: BLAST: pir:A75455; hypothetical protein - Deinococcus radiodurans (strain; E=2e-16 ddbj:BAB13746.1; (AB032601) azoreductase [Bacillus sp. OY1-2]; E=2e-05 gb:AAD13563.1; (AF080235) reductase homolog [Streptomyces; E=5e-04 COG: BH2050; COG0431 Predicted flavoprotein; E=6e-05; flavoprotein 6786668..6787201 Rhodopirellula baltica SH 1 1796854 NP_870599.1 CDS wecG NC_005027.1 6787357 6788190 R PMID: 8905231 best DB hits: BLAST: pir:S74482; UDP-N-acetyl-D-mannosaminuronic acid transferase rffM-1; E=6e-44 pir:C82265; UDP-N-acetyl-D-mannosamine transferase VC0927 [imported]; E=2e-20 gb:AAC78668.1; (AF094575) N-acetyl-mannosamine; E=1e-15 COG: slr1118; COG1922 Teichoic acid biosynthesis proteins; E=5e-45; UDP-N-acetyl-D-mannosaminuronic acid transferase complement(6787357..6788190) Rhodopirellula baltica SH 1 1794442 NP_870600.1 CDS RB12602 NC_005027.1 6788187 6789167 R best DB hits: BLAST: pir:T35588; probable secreted protein - Streptomyces coelicolor; E=0.24 ddbj:BAB05636.1; (AP001513) chitooligosaccharide deacetylase; E=0.63 PFAM: PF01522; Polysaccharide deacetylase; E=0.00027; chitooligosaccharide deacetylase complement(6788187..6789167) Rhodopirellula baltica SH 1 1796873 NP_870601.1 CDS RB12604 NC_005027.1 6789164 6790570 R best DB hits: BLAST: gb:AAF14309.1; (U45308) SqdX [Synechococcus sp. PCC 7942]; E=0.009 pir:T34839; probable hexosyltransferase (EC 2.4.1.-) SC2G5.06; E=0.031 pir:T35514; probable glycosyl transferase - Streptomyces coelicolor; E=0.072; hexosyltransferase complement(6789164..6790570) Rhodopirellula baltica SH 1 1792560 NP_870602.1 CDS RB12606 NC_005027.1 6790580 6791866 R PMID: 99184998 best DB hits: BLAST: gb:AAD24451.1; AF118389_8 (AF118389) Cps2E [Streptococcus suis]; E=4e-34 pir:S75572; glucosyltransferase - Synechocystis sp. (strain PCC; E=1e-33 pir:JC5726; phosphate-prenyl glycosyl-1-phosphate transferase (EC; E=9e-33 COG: slr0820; COG2148 Sugar transferases involved in lipopolysaccharide; E=9e-35 PFAM: PF02397; Bacterial sugar transferase; E=3.6e-52; Cps2E complement(6790580..6791866) Rhodopirellula baltica SH 1 1795381 NP_870603.1 CDS RB12608 NC_005027.1 6791928 6793742 R PMID: 10984043 best DB hits: BLAST: pir:D83367; hypothetical protein PA2235 [imported] - Pseudomonas; E=0.002 swissprot:P33698; EXOP_RHIME SUCCINOGLYCAN BIOSYNTHESIS TRANSPORT; E=0.010 pir:S37031; probable succinoglycan transport protein exoP -; E=0.021 COG: PA2235; COG3206 Uncharacterized protein involved in; E=2e-04; hypothetical protein complement(6791928..6793742) Rhodopirellula baltica SH 1 1792890 NP_870604.1 CDS RB12610 NC_005027.1 6793700 6793957 D hypothetical protein 6793700..6793957 Rhodopirellula baltica SH 1 1792733 NP_870605.1 CDS RB12611 NC_005027.1 6793964 6794791 D best DB hits: BLAST: pir:S75267; hypothetical protein slr1039 - Synechocystis sp. (strain; E=5e-07 swissprot:P46326; YXBB_BACSU HYPOTHETICAL 28.2 KDA PROTEIN IN; E=7e-06 gb:AAG29793.1; AF235050_16 (AF235050) methyltransferase; E=0.005 COG: slr1039; COG0500 SAM-dependent methyltransferases; E=5e-08 VC1257; COG2227; E=9e-04 BH2331; COG0500 SAM-dependent methyltransferases; E=0.001; methyltransferase 6793964..6794791 Rhodopirellula baltica SH 1 1796111 NP_870606.1 CDS RB12612 NC_005027.1 6794730 6794969 D hypothetical protein 6794730..6794969 Rhodopirellula baltica SH 1 1790350 NP_870607.1 CDS thyA NC_005027.1 6794945 6795739 D ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 6794945..6795739 Rhodopirellula baltica SH 1 1793491 NP_870608.1 CDS folA NC_005027.1 6795837 6796424 D PMID: 320005 best DB hits: BLAST: gb:AAD56934.1; AF180145_26 (AF180145) dihydrofolate reductase; E=1e-23 swissprot:P12833; DYR3_SALTY DIHYDROFOLATE REDUCTASE TYPE III; E=5e-22 pir:G82322; dihydrofolate reductase VC0440 [imported] - Vibrio; E=1e-20 COG: VC0440; COG0262 Dihydrofolate reductase; E=1e-21 PFAM: PF00186; Dihydrofolate reductase; E=2.9e-40; dihydrofolate reductase 6795837..6796424 Rhodopirellula baltica SH 1 1790628 NP_870609.1 CDS RB12621 NC_005027.1 6796604 6796861 R hypothetical protein complement(6796604..6796861) Rhodopirellula baltica SH 1 1791325 NP_870610.1 CDS rpsM NC_005027.1 6796904 6797287 D located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 6796904..6797287 Rhodopirellula baltica SH 1 1791316 NP_870611.1 CDS rpsK NC_005027.1 6797354 6797737 D located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 6797354..6797737 Rhodopirellula baltica SH 1 1792692 NP_870612.1 CDS rpoA NC_005027.1 6797797 6798792 D catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 6797797..6798792 Rhodopirellula baltica SH 1 1793080 NP_870613.1 CDS rplQ NC_005027.1 6798878 6799510 D PMID: 2989779 PMID: 10094780 best DB hits: BLAST: swissprot:Q9Z9H5; RL17_THETH 50S RIBOSOMAL PROTEIN L17 -----; E=7e-11 pir:B75313; ribosomal protein L17 - Deinococcus radiodurans (strain; E=3e-09 swissprot:Q9ZCT0; RL17_RICPR 50S RIBOSOMAL PROTEIN L17 -----; E=3e-09 COG: DR2129; COG0203 Ribosomal protein L17; E=2e-10 PFAM: PF01196; Ribosomal protein L17; E=4.2e-06; 50S ribosomal protein L17 6798878..6799510 Rhodopirellula baltica SH 1 1793823 NP_870614.1 CDS RB12629 NC_005027.1 6799598 6799726 R hypothetical protein complement(6799598..6799726) Rhodopirellula baltica SH 1 1792523 NP_870615.1 CDS RB12630 NC_005027.1 6799678 6800712 D signal peptide 6799678..6800712 Rhodopirellula baltica SH 1 1793320 NP_870616.1 CDS RB12631 NC_005027.1 6800639 6802222 D best DB hits: PFAM: PF00327; Ribosomal protein L30p/L7e; E=0.19; signal peptide 6800639..6802222 Rhodopirellula baltica SH 1 1791194 NP_870617.1 CDS RB12633 NC_005027.1 6802219 6803169 D PMID: 10751411 best DB hits: BLAST: gb:AAD48846.1; AF168362_1 (AF168362) protein associating with; E=3e-05 gb:AAF56739.2; (AE003762) CG12879 gene product [Drosophila; E=4e-05 pir:T15138; hypothetical protein T28F2.4 - Caenorhabditis elegans; E=5e-04 COG: NMB1786; COG2850 Uncharacterized ACR; E=0.007 PFAM: PF02373; jmjC domain; E=0.018; protein associating with small stress protein PASS1 6802219..6803169 Rhodopirellula baltica SH 1 1791351 NP_870618.1 CDS RB12634 NC_005027.1 6803224 6803694 R signal peptide complement(6803224..6803694) Rhodopirellula baltica SH 1 1793298 NP_870619.1 CDS acc NC_005027.1 6803801 6805087 R PMID: 7592499 best DB hits: BLAST: pir:A57710; acetyl-CoA carboxylase (EC 6.4.1.2) - wheat -----; E=2e-05 prf:2208491A; Ac-CoA carboxylase [Triticum aestivum]; E=2e-05 pir:T09538; acetyl-CoA carboxylase (EC 6.4.1.2) - alfalfa -----; E=3e-05 COG: PA0494; COG0439 Biotin carboxylase; E=2e-04 carB; COG0458 Carbamoylphosphate synthase large subunit (split gene; E=0.001 DR0668; COG0458 Carbamoylphosphate synthase large subunit (split; E=0.002 PFAM: PF02786; Carbamoyl-phosphate synthase L ch; E=0.49; acetyl-CoA carboxylase complement(6803801..6805087) Rhodopirellula baltica SH 1 1793334 NP_870620.1 CDS apbA NC_005027.1 6805084 6806130 R PMID: 9488683 best DB hits: BLAST: swissprot:O50098; APBA_PYRHO PROBABLE 2-DEHYDROPANTOATE; E=5e-09 embl:CAB04765.1; (Z82004) ORF12(1) [Rhodococcus erythropolis]; E=2e-08 pir:T35004; probable oxidoreductase - Streptomyces coelicolor; E=5e-06 COG: PH1390; COG1893 Ketopantoate reductase; E=5e-10 PFAM: PF02558; Ketopantoate reductase PanE/ApbA; E=0.00046; 2-dehydropantoate 2-reductase complement(6805084..6806130) Rhodopirellula baltica SH 1 1795880 NP_870621.1 CDS RB12639 NC_005027.1 6806127 6806249 R hypothetical protein complement(6806127..6806249) Rhodopirellula baltica SH 1 1791324 NP_870622.1 CDS RB12640 NC_005027.1 6806299 6807978 R PMID: 11538549 best DB hits: BLAST: gb:AAD32141.1; AF123503_1 (AF123503) Nt-gh3 deduced protein; E=6e-16 pir:T00515; hypothetical protein T20D16.20 - Arabidopsis thaliana; E=1e-15 ddbj:BAA97524.1; (AB026634) auxin-responsive-like protein; E=1e-14; auxin-responsive-like protein complement(6806299..6807978) Rhodopirellula baltica SH 1 1792659 NP_870623.1 CDS RB12643 NC_005027.1 6807977 6808588 D hypothetical protein 6807977..6808588 Rhodopirellula baltica SH 1 1794409 NP_870624.1 CDS RB12645 NC_005027.1 6808336 6808707 R hypothetical protein complement(6808336..6808707) Rhodopirellula baltica SH 1 1790379 NP_870625.1 CDS RB12646 NC_005027.1 6808846 6810339 R PMID: 8282725 best DB hits: BLAST: embl:CAB54579.1; (AJ006397) histidine kinase [Streptococcus; E=2e-10 gb:AAG59311.1; AE005644_5 (AE005644) sensor protein for basR; E=6e-10 pir:E83212; probable sensorresponse regulator hybrid PA3462; E=3e-09 COG: PA3462; COG0642 Sensory transduction histidine kinases; E=3e-10 PFAM: PF00512; His Kinase A (phosphoacceptor); E=2.1e-10 PF02518; Histidine kinase-, DNA gyrase B; E=6.2e-15; histidine kinase complement(6808846..6810339) Rhodopirellula baltica SH 1 1790881 NP_870626.1 CDS RB12648 NC_005027.1 6810287 6810496 D hypothetical protein 6810287..6810496 Rhodopirellula baltica SH 1 1790849 NP_870627.1 CDS RB12649 NC_005027.1 6810538 6810876 R hypothetical protein complement(6810538..6810876) Rhodopirellula baltica SH 1 1793011 NP_870628.1 CDS glmS NC_005027.1 6810910 6812694 D PMID: 7476196 best DB hits: BLAST: embl:CAB87226.1; (AL163641) glucosamine-fructose-6-phosphate; E=1e-135 pir:T44486; glutamine--fructose-6-phosphate transaminase; E=1e-133 gb:AAF09884.1; AE001891_3 (AE001891); E=1e-132 COG: DR0302; COG0449 Glucosamine 6-phosphate synthetase, contains; E=1e-133 PFAM: PF00310; Glutamine amidotransferases class-II; E=2.1e-65 PF01380; SIS domain; E=2.2e-39; glucosamine-fructose-6-phosphate aminotransferase 6810910..6812694 Rhodopirellula baltica SH 1 1792792 NP_870629.1 CDS RB12653 NC_005027.1 6812798 6813016 D hypothetical protein 6812798..6813016 Rhodopirellula baltica SH 1 1792538 NP_870630.1 CDS leuA NC_005027.1 6813143 6814678 D dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 6813143..6814678 Rhodopirellula baltica SH 1 1791848 NP_870631.1 CDS leuD NC_005027.1 6814851 6815441 D PMID: 2993799 best DB hits: BLAST: ddbj:BAB06774.1; (AP001517) 3-isopropylmalate dehydratase small; E=3e-60 pir:E81128; 3-isopropylmalate dehydratase, small chain NMB1034; E=2e-58 pir:C81836; probable 3-isopropylmalate dehydratase (EC 4.2.1.33); E=5e-58 COG: BH3055; COG0066 3-isopropylmalate dehydratase small subunit; E=3e-61 PFAM: PF00694; Aconitase C-terminal domain; E=5e-62; 3-isopropylmalate dehydratase small subunit 6814851..6815441 Rhodopirellula baltica SH 1 1795393 NP_870632.1 CDS RB12660 NC_005027.1 6815630 6816235 D signal peptide 6815630..6816235 Rhodopirellula baltica SH 1 1793208 NP_870633.1 CDS pyrF NC_005027.1 6816342 6817250 D PMID: 8787418 best DB hits: BLAST: swissprot:P96076; DCOP_THETH OROTIDINE 5'-PHOSPHATE DECARBOXYLASE; E=3e-38 pir:G75302; orotidine 5'-phosphate decarboxylase - Deinococcus; E=5e-35 gb:AAG19923.1; (AE005076) orotidine-5'-monophosphate (Ura3); PyrF; E=4e-33 COG: DR2200_2; COG0284 Orotidine-5'-phosphate decarboxylase; E=1e-35; orotidine 5-phosphate decarboxylase 6816342..6817250 Rhodopirellula baltica SH 1 1790129 NP_870634.1 CDS RB12662 NC_005027.1 6817193 6817408 D hypothetical protein 6817193..6817408 Rhodopirellula baltica SH 1 1792175 NP_870635.1 CDS RB12663 NC_005027.1 6817409 6817711 D hypothetical protein 6817409..6817711 Rhodopirellula baltica SH 1 1794362 NP_870636.1 CDS RB12664 NC_005027.1 6817708 6818412 D hypothetical protein 6817708..6818412 Rhodopirellula baltica SH 1 1790944 NP_870637.1 CDS RB12666 NC_005027.1 6818273 6821890 D best DB hits: BLAST: gb:AAB91057.1; (AE001094) molybdopterin oxidoreductase, iron-sulfur; E=5e-29 gb:AAG19285.1; (AE005024) molybdopterin oxidoreductase; HmoA; E=3e-26 gb:AAB90738.1; (AE001069) molybdopterin oxidoreductase, iron-sulfur; E=1e-24 COG: AF0175; COG0437 Fe-S-cluster-containing hydrogenase components 1; E=5e-30 PFAM: PF01568; Molydopterin dinucleotide bin; E=0.018 PF00037; 4Fe-4S binding domain; E=0.15; molybdopterin oxidoreductase, iron-sulfur binding subunit 6818273..6821890 Rhodopirellula baltica SH 1 1790307 NP_870638.1 CDS RB12668 NC_005027.1 6820061 6821848 R hypothetical protein complement(6820061..6821848) Rhodopirellula baltica SH 1 1790291 NP_870639.1 CDS RB12669 NC_005027.1 6821952 6823373 D best DB hits: BLAST: gb:AAB91058.1; (AE001094) molybdopterin oxidoreductase, membrane; E=5e-06 pir:T50876; hypothetical membrane protein [imported] - Rubrivivax; E=7e-06 gb:AAG19286.1; (AE005024) molybdopterin oxidoreductase; Moz; E=0.019; molybdopterin oxidoreductase, membrane subunit 6821952..6823373 Rhodopirellula baltica SH 1 1793812 NP_870640.1 CDS RB12673 NC_005027.1 6823458 6824990 D hypothetical protein 6823458..6824990 Rhodopirellula baltica SH 1 1794968 NP_870641.1 CDS RB12676 NC_005027.1 6825025 6826353 D best DB hits: PFAM: PF01473; cell wall binding repea; E=0.31 PF02326; YMF19 hypothetical plant mitocho; E=0.59; signal peptide 6825025..6826353 Rhodopirellula baltica SH 1 1793838 NP_870642.1 CDS RB12677 NC_005027.1 6826426 6826722 D signal peptide 6826426..6826722 Rhodopirellula baltica SH 1 1790066 NP_870643.1 CDS RB12679 NC_005027.1 6826760 6827779 D best DB hits: BLAST: embl:CAC08530.1; (AJ249578) hypothetical protein [Rhodothermus; E=1e-39 pir:A70488; hypothetical protein aq_2189 - Aquifex aeolicus -----; E=1e-18 ddbj:BAA06975.1; (D32217) ORF3 [Desulfovibrio vulgaris]; E=1e-09 COG: aq_2189; COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in; E=1e-19; hypothetical protein 6826760..6827779 Rhodopirellula baltica SH 1 1792374 NP_870644.1 CDS RB12680 NC_005027.1 6827752 6827877 D hypothetical protein 6827752..6827877 Rhodopirellula baltica SH 1 1792739 NP_870645.1 CDS ctaC NC_005027.1 6827847 6829028 D PMID: 7678007 best DB hits: BLAST: embl:CAC08531.1; (AJ249578) cytochrome oxidase subunit II; E=1e-53 swissprot:Q04441; COX2_BACFI CYTOCHROME C OXIDASE POLYPEPTIDE II; E=2e-18 pir:A23711; cytochrome-c oxidase (EC 1.9.3.1) chain IIc precursor -; E=4e-13 COG: slr1136; COG1622 Heme/copper-type cytochrome/quinol oxidases,; E=2e-10 PFAM: PF00116; Cytochrome C oxidase subunit II,; E=5.6e-05 PF00034; Cytochrome c; E=1.5e-05; cytochrome oxidase subunit II 6827847..6829028 Rhodopirellula baltica SH 1 1795474 NP_870646.1 CDS ctaD NC_005027.1 6829129 6830871 D PMID: 20576172 best DB hits: BLAST: embl:CAC08532.1; (AJ249578) cytochrome oxidase subunit I; E=1e-146 ddbj:BAA06976.1; (D32217) cytochrome c oxidase-like protein; E=1e-122 swissprot:Q06473; COX1_SYNY3 CYTOCHROME C OXIDASE POLYPEPTIDE I; E=3e-99 COG: slr1137; COG0843 Heme/copper-type cytochrome/quinol oxidases,; E=1e-100 RP405; COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit; E=3e-93 BS_ctaD; COG0843 Heme/copper-type cytochrome/quinol oxidases,; E=4e-91 PFAM: PF00115; Cytochrome C and Quinol oxidase pol; E=8.3e-185; cytochrome oxidase subunit I 6829129..6830871 Rhodopirellula baltica SH 1 1796798 NP_870647.1 CDS RB12684 NC_005027.1 6830874 6831038 R hypothetical protein complement(6830874..6831038) Rhodopirellula baltica SH 1 1792676 NP_870648.1 CDS ctaE NC_005027.1 6831007 6832302 D PMID: 20576172 best DB hits: BLAST: embl:CAC08533.1; (AJ249578) cytochrome oxidase subunit III; E=3e-27 embl:CAA98149.1; (Z73914) ORF175 protein [Pseudomonas stutzeri]; E=2e-08 gb:AAG34379.1; AF197466_2 (AF197466) NirO [Pseudomonas; E=3e-08 COG: APE0793_2; COG1845 Heme/copper-type cytochrome/quinol oxidase,; E=5e-08 slr2083; COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit; E=8e-08 VNG0662G; COG1845 Heme/copper-type cytochrome/quinol oxidase,; E=2e-06; cytochrome oxidase subunit III 6831007..6832302 Rhodopirellula baltica SH 1 1790526 NP_870649.1 CDS ctaF NC_005027.1 6832365 6832757 D PMID: 7678007 best DB hits: BLAST: embl:CAC08534.1; (AJ249578) cytochrome oxidase subunit IV; E=0.025; cytochrome oxidase subunit IV 6832365..6832757 Rhodopirellula baltica SH 1 1791385 NP_870650.1 CDS RB12689 NC_005027.1 6833004 6833324 D signal peptide 6833004..6833324 Rhodopirellula baltica SH 1 1792972 NP_870651.1 CDS kpsU NC_005027.1 6833336 6834088 R CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase complement(6833336..6834088) Rhodopirellula baltica SH 1 1793177 NP_870652.1 CDS RB12691 NC_005027.1 6834085 6834264 R hypothetical protein complement(6834085..6834264) Rhodopirellula baltica SH 1 1793252 NP_870653.1 CDS RB12692 NC_005027.1 6834241 6836013 D best DB hits: BLAST: ddbj:BAB05232.1; (AP001512) BH1513~unknown conserved protein in; E=3e-36 pir:S76103; hypothetical protein - Synechocystis sp. (strain PCC; E=8e-35 COG: BH1513; COG2252 Permeases; E=2e-37; permease 6834241..6836013 Rhodopirellula baltica SH 1 1790766 NP_870654.1 CDS RB12693 NC_005027.1 6836007 6836192 R hypothetical protein complement(6836007..6836192) Rhodopirellula baltica SH 1 1794082 NP_870655.1 CDS RB12694 NC_005027.1 6836147 6837178 R PMID: 7768349 best DB hits: BLAST: pir:T42076; protein kinase homolog - Streptomyces coelicolor -----; E=2e-12 gb:AAG48248.1; AF282407_1 (AF282407) p70 ribosomal protein S6; E=2e-12 gb:AAF22219.1; AF141378_1 (AF141378) protein kinase PK4 [Zea mays]; E=2e-12 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=2e-12 PFAM: PF01636; Aminoglycoside phosphotransferas; E=0.093 PF00069; Protein kinase domain; E=6.3e-17 PF00285; Citrate synthase; E=0.22; serine/threonine kinase complement(6836147..6837178) Rhodopirellula baltica SH 1 1793451 NP_870656.1 CDS RB12696 NC_005027.1 6837183 6837380 D hypothetical protein 6837183..6837380 Rhodopirellula baltica SH 1 1794302 NP_870657.1 CDS RB12697 NC_005027.1 6837436 6842547 D best DB hits: BLAST: embl:CAC19834.1; (AJ401093) hypothetical protein [Actinomyces; E=0.065 ddbj:BAB10333.1; (AB016872) gene_id:K21P3.2~unknown protein; E=0.081 pir:T28679; fibrinogen-binding protein homolog - Staphylococcus; E=0.26 PFAM: PF00404; Dockerin type I repeat; E=0.01; adhesin 6837436..6842547 Rhodopirellula baltica SH 1 1789914 NP_870658.1 CDS RB12700 NC_005027.1 6842722 6844113 R signal peptide complement(6842722..6844113) Rhodopirellula baltica SH 1 1790022 NP_870659.1 CDS RB12702 NC_005027.1 6844083 6844877 R signal peptide complement(6844083..6844877) Rhodopirellula baltica SH 1 1795971 NP_870660.1 CDS RB12705 NC_005027.1 6844874 6845134 R hypothetical protein complement(6844874..6845134) Rhodopirellula baltica SH 1 1794745 NP_870661.1 CDS RB12707 NC_005027.1 6845145 6846587 R hypothetical protein complement(6845145..6846587) Rhodopirellula baltica SH 1 1792514 NP_870662.1 CDS RB12710 NC_005027.1 6846593 6846703 D hypothetical protein 6846593..6846703 Rhodopirellula baltica SH 1 1792245 NP_870663.1 CDS RB12711 NC_005027.1 6846807 6848021 D hypothetical protein 6846807..6848021 Rhodopirellula baltica SH 1 1795337 NP_870664.1 CDS RB12713 NC_005027.1 6848021 6849088 D PMID: 11759840 best DB hits: PFAM: PF01040; UbiA prenyltransferase; E=2.4e-11; signal peptide 6848021..6849088 Rhodopirellula baltica SH 1 1790703 NP_870665.1 CDS RB12716 NC_005027.1 6849115 6849459 R hypothetical protein complement(6849115..6849459) Rhodopirellula baltica SH 1 1791206 NP_870666.1 CDS RB12718 NC_005027.1 6849432 6850577 D PMID: 10910347 best DB hits: BLAST: gb:AAK00328.1; AF320250_1 (AF320250) YmdA [Lactobacillus; E=0.029 pir:F82689; tRNA adenylyltransferase XF1362 [imported] - Xylella; E=0.044 pir:D71218; hypothetical protein PH0007 - Pyrococcus horikoshii; E=0.054 COG: XF1362; COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; E=0.004 PH0007; COG2413 Uncharacterized ACR; E=0.005 PFAM: PF01966; HD domain; E=0.0033; tRNA adenylyltransferase 6849432..6850577 Rhodopirellula baltica SH 1 1793013 NP_870667.1 CDS RB12720 NC_005027.1 6850620 6856325 R PMID: 10607664 best DB hits: BLAST: gb:AAB94071.1; (AF022226) mannan-binding lectin; collectin; E=0.004 swissprot:P49259; PA2R_BOVIN 180 KD SECRETORY PHOSPHOLIPASE A2; E=0.10 gb:AAA48719.1; (J04028) proteoglycan core protein [Gallus gallus]; E=0.11 PFAM: PF00059; Lectin C-type domain; E=0.0043; mannan-binding protein MBP (lectin) complement(6850620..6856325) Rhodopirellula baltica SH 1 1793653 NP_870668.1 CDS RB12724 NC_005027.1 6856415 6858241 R PMID: 1542567 best DB hits: BLAST: pir:H65118; hypothetical adenine-specific methylase in fis- envR; E=4e-29 swissprot:P28638; YHDJ_ECOLI HYPOTHETICAL ADENINE-SPECIFIC; E=4e-29 gb:AAG58390.1; AE005554_1 (AE005554) methyltransferase; E=6e-29 COG: yhdJ; COG0863 Adenine-specific DNA methylase; E=4e-30 jhp1284; COG2189 Adenine specific DNA methylase Mod; E=2e-09 jhp0248; COG0863 Adenine-specific DNA methylase; E=1e-07 PFAM: PF01555; DNA methylase; E=2e-41; adenine-specific methyltransferase complement(6856415..6858241) Rhodopirellula baltica SH 1 1792936 NP_870669.1 CDS RB12727 NC_005027.1 6858259 6860301 R PMID: 9501997 best DB hits: BLAST: ddbj:BAB10033.1; (AB007727) contains similarity to unknown; E=0.18; hypothetical protein complement(6858259..6860301) Rhodopirellula baltica SH 1 1792300 NP_870670.1 CDS RB12730 NC_005027.1 6860259 6860840 R PMID: 9139909 best DB hits: BLAST: gb:AAC45221.1; (U87307) extracytoplasmic function alternative; E=5e-08 gb:AAC45219.1; (U87308) extracytoplasmic function alternative; E=1e-06 pir:H70507; probable sigE protein - Mycobacterium tuberculosis; E=7e-06 COG: Rv1221; COG1595 DNA-directed RNA polymerase specialized sigma; E=7e-07 Rv3286c; COG1191 DNA-directed RNA polymerase specialized sigma; E=2e-04 slr1545; COG1595 DNA-directed RNA polymerase specialized sigma; E=2e-04 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=6e-06 PF00140; Sigma-70 factor; E=0.019; ECF subfamily RNA polymerase sigma-70 factor complement(6860259..6860840) Rhodopirellula baltica SH 1 1794790 NP_870671.1 CDS RB12732 NC_005027.1 6860800 6862068 R PMID: 12024217; hypothetical protein complement(6860800..6862068) Rhodopirellula baltica SH 1 1792683 NP_870672.1 CDS RB12734 NC_005027.1 6862186 6863889 R signal peptide complement(6862186..6863889) Rhodopirellula baltica SH 1 1793004 NP_870673.1 CDS RB12737 NC_005027.1 6863917 6864114 D hypothetical protein 6863917..6864114 Rhodopirellula baltica SH 1 1795908 NP_870674.1 CDS RB12739 NC_005027.1 6864106 6864276 R hypothetical protein complement(6864106..6864276) Rhodopirellula baltica SH 1 1793492 NP_870675.1 CDS gnl NC_005027.1 6864364 6865551 R PMID: 1482681 best DB hits: BLAST: swissprot:Q01578; GNL_ZYMMO GLUCONOLACTONASE PRECURSOR; E=1e-54 gb:AAK03332.1; (AE006164) unknown [Pasteurella multocida]; E=1e-39 pir:B82698; gluconolactonase precursor XF1297 [imported] - Xylella; E=3e-39 COG: XF1297; COG3386 Uncharacterized protein; E=3e-40; gluconolactonase [precursor] complement(6864364..6865551) Rhodopirellula baltica SH 1 1791740 NP_870676.1 CDS RB12741 NC_005027.1 6865612 6868329 R hypothetical protein complement(6865612..6868329) Rhodopirellula baltica SH 1 1794176 NP_870677.1 CDS RB12744 NC_005027.1 6868320 6868430 R hypothetical protein complement(6868320..6868430) Rhodopirellula baltica SH 1 1794826 NP_870678.1 CDS purM NC_005027.1 6868433 6869674 D catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 6868433..6869674 Rhodopirellula baltica SH 1 1792852 NP_870679.1 CDS mutM NC_005027.1 6869843 6870727 D PMID: 7704272 best DB hits: BLAST: swissprot:O53191; YO64_MYCTU DNA GLYCOSYLASE RV2464C; E=6e-55 embl:CAC10002.1; (AL442143) DNA repair hydrolase; E=6e-46 swissprot:P95744; FPG_SYNEN FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE; E=1e-14 COG: Rv2464c; COG0266 Formamidopyrimidine-DNA glycosylase; E=2e-55 PFAM: PF01149; Formamidopyrimidine-DNA glycos; E=4.3e-40; formamidopyrimidine-DNA glycosylase 6869843..6870727 Rhodopirellula baltica SH 1 1795345 NP_870680.1 CDS RB12747 NC_005027.1 6870758 6870919 D hypothetical protein 6870758..6870919 Rhodopirellula baltica SH 1 1794519 NP_870681.1 CDS RB12749 NC_005027.1 6870941 6871765 R hypothetical protein complement(6870941..6871765) Rhodopirellula baltica SH 1 1791903 NP_870682.1 CDS RB12748 NC_005027.1 6870944 6871483 D hypothetical protein 6870944..6871483 Rhodopirellula baltica SH 1 1796805 NP_870683.1 CDS RB12751 NC_005027.1 6871720 6872103 D hypothetical protein 6871720..6872103 Rhodopirellula baltica SH 1 1793331 NP_870684.1 CDS degP NC_005027.1 6871994 6873523 D PMID: 2180903 best DB hits: BLAST: pir:F83550; serine proteinase MucD precursor PA0766 [imported] -; E=1e-50 swissprot:Q44597; DEGP_BRUAB PROBABLE SERINE PROTEASE DO-LIKE; E=9e-47 gb:AAK01318.1; (AF190580) MucD [Pseudomonas syringae pv.; E=2e-46 COG: PA0766; COG0265 Trypsin-like serine proteases, typically; E=1e-51 htrA; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=9e-44 aq_1450; COG0265 Trypsin-like serine proteases, typically; E=2e-43 PFAM: PF00089; Trypsin; E=1.8e-14 PF00595; PDZ domain (Also known as DHR or GLG; E=1.4e-10; serine proteinase 6871994..6873523 Rhodopirellula baltica SH 1 1795505 NP_870685.1 CDS RB12755 NC_005027.1 6873726 6874088 R hypothetical protein complement(6873726..6874088) Rhodopirellula baltica SH 1 1791400 NP_870686.1 CDS leuA NC_005027.1 6873997 6875685 R PMID: 6171647 best DB hits: BLAST: ddbj:BAB06777.1; (AP001517) 2-isopropylmalate synthase [Bacillus; E=1e-133 pir:A75045; 2-isopropylmalate synthase (leua-1) PAB0890 - Pyrococcus; E=1e-131 pir:F75391; 2-isopropylmalate synthase - Deinococcus radiodurans; E=1e-131 COG: BH3058; COG0119 Isopropylmalate/homocitrate/citramalate synthases; E=1e-134 PFAM: PF00682; HMGL-like; E=1.7e-127; 2-isopropylmalate synthase complement(6873997..6875685) Rhodopirellula baltica SH 1 1793294 NP_870687.1 CDS RB12758 NC_005027.1 6875827 6875946 D hypothetical protein 6875827..6875946 Rhodopirellula baltica SH 1 1794808 NP_870688.1 CDS RB12759 NC_005027.1 6876167 6876916 R hypothetical protein complement(6876167..6876916) Rhodopirellula baltica SH 1 1794953 NP_870689.1 CDS RB12760 NC_005027.1 6876908 6877060 D hypothetical protein 6876908..6877060 Rhodopirellula baltica SH 1 1794414 NP_870690.1 CDS RB12761 NC_005027.1 6877026 6877190 D hypothetical protein 6877026..6877190 Rhodopirellula baltica SH 1 1794366 NP_870691.1 CDS nrdA NC_005027.1 6877208 6880330 D catalyzes the reduction of ribonucleotides to deoxyribonucleotides; the rate-limiting step in dNTP synthesis; vitamin B12-dependent ribonucleotide reductase 6877208..6880330 Rhodopirellula baltica SH 1 1793559 NP_870692.1 CDS RB12766 NC_005027.1 6880940 6882055 D PMID: 11557134 best DB hits: BLAST: pir:C82181; conserved hypothetical protein VC1592 [imported] -; E=2e-15 pir:G70332; conserved hypothetical protein aq_367 - Aquifex aeolicus; E=6e-15 pir:D83238; hypothetical protein PA3258 [imported] - Pseudomonas; E=2e-13 COG: VC1592; COG2200 Diguanylate cyclase/phosphodiesterase domain 2 (EAL); E=1e-16 aq_367_3; COG2200 Diguanylate cyclase/phosphodiesterase domain 2; E=6e-16 VC1641; COG2200 Diguanylate cyclase/phosphodiesterase domain 2 (EAL); E=2e-09 PFAM: PF00498; FHA domain; E=6.6e-15 PF00563; Domain of unknown function 2; E=3.1e-07; hypothetical protein 6880940..6882055 Rhodopirellula baltica SH 1 1796884 NP_870693.1 CDS pilB NC_005027.1 6882231 6884336 D PMID: 1971619 PMID: 1944223 best DB hits: BLAST: pir:E72032; general secretion pathway protein E CP1055 [imported] -; E=6e-91 embl:CAA70956.1; (Y09824) etpE [Escherichia coli]; E=2e-93 gb:AAC70102.1; (AF074613) type II secretion protein [Escherichia; E=6e-94 COG: slr0063; COG2804 Predicted ATPases involved in pili biogenesis, PilB; E=1e-81 PFAM: PF00004; ATPase associated with variou; E=0.0009 PF00005; ABC transporter; E=0.074 PF00448; SRP54-type protein, GTPase domain; E=0.01; type IV fimbrial assembly protein PilB 6882231..6884336 Rhodopirellula baltica SH 1 1796806 NP_870694.1 CDS RB12770 NC_005027.1 6884306 6884806 R hypothetical protein complement(6884306..6884806) Rhodopirellula baltica SH 1 1793480 NP_870695.1 CDS RB12771 NC_005027.1 6884361 6884558 D hypothetical protein 6884361..6884558 Rhodopirellula baltica SH 1 1791972 NP_870696.1 CDS pilT NC_005027.1 6884826 6885932 D PMID: 1676385 best DB hits: BLAST: pir:C70365; twitching motility protein PilT - Aquifex aeolicus; E=7e-81 pir:B75333; twitching mobility protein - Deinococcus radiodurans; E=9e-81 embl:CAB56295.1; (AJ249385) twitching motility protein; E=2e-77 COG: aq_745; COG2805 Predicted ATPases involved in pili biogenesis, PilT; E=6e-82 TM0837; COG2804 Predicted ATPases involved in pili biogenesis, PilB; E=4e-27 PFAM: PF00437; Bacterial type II secretion syst; E=0.18 PF02283; Cobinamide kinase / cobinamide p; E=0.86 PF00437; Bacterial type II secretion syst; E=1.5e-51; twitching motility protein PilT 6884826..6885932 Rhodopirellula baltica SH 1 1794654 NP_870697.1 CDS pilB NC_005027.1 6885973 6887763 D PMID: 1971619 best DB hits: BLAST: pir:C75333; general secretion pathway protein E - Deinococcus; E=1e-105 pir:B70469; type IV pilus assembly protein TapB - Aquifex aeolicus; E=1e-104 swissprot:P45792; TAPB_AERHY TYPE IV PILUS ASSEMBLY PROTEIN TAPB; E=1e-100 COG: DR1964; COG2804 Predicted ATPases involved in pili biogenesis, PilB; E=1e-107 PFAM: PF00005; ABC transporter; E=0.27 PF00448; SRP54-type protein, GTPase doma; E=0.01 PF00004; ATPase associated with v; E=0.0029; type IV fimbrial assembly protein PilB 6885973..6887763 Rhodopirellula baltica SH 1 1795695 NP_870698.1 CDS RB12778 NC_005027.1 6887872 6888231 D crystal structure of protein from Xanthomonas shows pentameric toroidal structure; physiological function is unknown; hypothetical protein 6887872..6888231 Rhodopirellula baltica SH 1 1790441 NP_870699.1 CDS pilC NC_005027.1 6888383 6889822 D PMID: 1971619 best DB hits: BLAST: pir:A75344; pilin biogenesis protein - Deinococcus radiodurans; E=7e-48 swissprot:P22609; PILC_PSEAE FIMBRIAL ASSEMBLY PROTEIN PILC; E=7e-44 pir:C83078; still frameshift type 4 fimbrial biogenesis protein PilC; E=3e-41 COG: DR1863; COG1459 General secretory pathway protein F; E=6e-49 PFAM: PF00482; Bacterial type II secretion system p; E=1.2e-68; type IV fimbrial assembly protein PilC 6888383..6889822 Rhodopirellula baltica SH 1 1794972 NP_870700.1 CDS RB12782 NC_005027.1 6889819 6889986 R hypothetical protein complement(6889819..6889986) Rhodopirellula baltica SH 1 1793179 NP_870701.1 CDS RB12783 NC_005027.1 6889970 6891277 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.62; hypothetical protein 6889970..6891277 Rhodopirellula baltica SH 1 1795909 NP_870702.1 CDS RB12785 NC_005027.1 6891325 6892548 D signal peptide 6891325..6892548 Rhodopirellula baltica SH 1 1796896 NP_870703.1 CDS RB12786 NC_005027.1 6892551 6893792 D best DB hits: PFAM: PF02501; Bacterial type II secretion system p; E=0.41 PF00114; Pilin (bacterial filament); E=0.025; hypothetical protein 6892551..6893792 Rhodopirellula baltica SH 1 1795891 NP_870704.1 CDS RB12787 NC_005027.1 6893792 6895354 D signal peptide 6893792..6895354 Rhodopirellula baltica SH 1 1792827 NP_870705.1 CDS RB12790 NC_005027.1 6895351 6902541 D best DB hits: PFAM: PF01537; Herpesvirus glycoprotein D; E=0.038; hypothetical protein 6895351..6902541 Rhodopirellula baltica SH 1 1792580 NP_870706.1 CDS RB12795 NC_005027.1 6902552 6904978 D best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.53; signal peptide 6902552..6904978 Rhodopirellula baltica SH 1 1791329 NP_870707.1 CDS RB12797 NC_005027.1 6905009 6905182 D hypothetical protein 6905009..6905182 Rhodopirellula baltica SH 1 1794817 NP_870708.1 CDS polA NC_005027.1 6905179 6908262 R PMID: 6276402 best DB hits: BLAST: gb:AAD28505.1; AF121780_1 (AF121780) DNA polymerase I [Rhodothermus; E=1e-166 swissprot:P43741; DPO1_HAEIN DNA POLYMERASE I (POL I) ----- pir:; E=1e-165 gb:AAC98908.1; (AF028719) DNA polymerase type I [Rhodothermus sp.; E=1e-164 COG: HI0856_2; COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase; E=1e-122 jhp1363_2; COG0749 DNA polymerase I - 3'-5' exonuclease and; E=1e-55 RP776_1; COG0258 5'-3' exonuclease (including N-terminal domain of; E=3e-46 PFAM: PF02739; 5'-3' exonuclease, N-terminal; E=1e-62 PF01367; 5'-3' exonuclease, C-terminal; E=2e-37 PF01612; 3'-5' exonuclease; E=2.5e-47; DNA polymerase I complement(6905179..6908262) Rhodopirellula baltica SH 1 1795863 NP_870709.1 CDS RB12800 NC_005027.1 6908240 6908710 D hypothetical protein 6908240..6908710 Rhodopirellula baltica SH 1 1795688 NP_870710.1 CDS RB12802 NC_005027.1 6908746 6908985 D hypothetical protein 6908746..6908985 Rhodopirellula baltica SH 1 1792941 NP_870711.1 CDS RB12803 NC_005027.1 6908939 6909112 R hypothetical protein complement(6908939..6909112) Rhodopirellula baltica SH 1 1795468 NP_870712.1 CDS RB12804 NC_005027.1 6909137 6910618 D PMID: 9851916 best DB hits: BLAST: gb:AAF60367.1; (AC006607) Hypothetical protein C09E7.a; E=0.015 gb:AAF60369.1; (AC006607) Hypothetical protein C09E7.c; E=0.20 gb:AAF17230.1; AF126020_1 (AF126020) B-cell receptor-associated; E=0.47; hypothetical protein 6909137..6910618 Rhodopirellula baltica SH 1 1792478 NP_870713.1 CDS RB12806 NC_005027.1 6910548 6911165 R hypothetical protein complement(6910548..6911165) Rhodopirellula baltica SH 1 1792572 NP_870714.1 CDS RB12808 NC_005027.1 6911241 6912350 R signal peptide complement(6911241..6912350) Rhodopirellula baltica SH 1 1789918 NP_870715.1 CDS RB12810 NC_005027.1 6912339 6912542 D hypothetical protein 6912339..6912542 Rhodopirellula baltica SH 1 1792521 NP_870716.1 CDS RB12811 NC_005027.1 6912580 6912792 R hypothetical protein complement(6912580..6912792) Rhodopirellula baltica SH 1 1794376 NP_870717.1 CDS fabH NC_005027.1 6912793 6914016 R FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase complement(6912793..6914016) Rhodopirellula baltica SH 1 1795598 NP_870718.1 CDS RB12813 NC_005027.1 6913968 6914183 R hypothetical protein complement(6913968..6914183) Rhodopirellula baltica SH 1 1791175 NP_870719.1 CDS RB12814 NC_005027.1 6914337 6914528 R hypothetical protein complement(6914337..6914528) Rhodopirellula baltica SH 1 1793762 NP_870720.1 CDS RB12815 NC_005027.1 6914525 6914656 R hypothetical protein complement(6914525..6914656) Rhodopirellula baltica SH 1 1795699 NP_870721.1 CDS guaA NC_005027.1 6914710 6915483 D PMID: 3298209 best DB hits: BLAST: pir:E70885; hypothetical protein Rv2859c - Mycobacterium; E=2e-24 pir:C83609; probable glutamine amidotransferase PA0297 [imported] -; E=1e-19 pir:T36850; hypothetical protein SCI35.37 - Streptomyces coelicolor; E=1e-17 COG: Rv2859c; COG2071 Predicted glutamine amidotransferases; E=2e-25 PFAM: PF00117; Glutamine amidotransferase class-I; E=8.7e-05; glutamine amidotransferase 6914710..6915483 Rhodopirellula baltica SH 1 1794789 NP_870722.1 CDS RB12818 NC_005027.1 6915498 6915989 R hypothetical protein complement(6915498..6915989) Rhodopirellula baltica SH 1 1790499 NP_870723.1 CDS RB12820 NC_005027.1 6915996 6916142 R hypothetical protein complement(6915996..6916142) Rhodopirellula baltica SH 1 1793828 NP_870724.1 CDS rplS NC_005027.1 6916205 6916558 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(6916205..6916558) Rhodopirellula baltica SH 1 1793770 NP_870725.1 CDS trmD NC_005027.1 6916578 6917306 R PMID: 6357787 PMID: 6337136 best DB hits: BLAST: ddbj:BAB06198.1; (AP001515) tRNA methyltransferase [Bacillus; E=8e-56 swissprot:O31741; TRMD_BACSU TRNA (GUANINE-N1)-METHYLTRANSFERASE; E=3e-54 gb:AAK05662.1; AE006387_5 (AE006387) tRNA methyltransferase; E=7e-54 COG: BH2479; COG0336 tRNA-(guanine-N1)-methyltransferase; E=8e-57 PFAM: PF01746; tRNA (Guanine-1)-methyltransferas; E=2.7e-101; tRNA (guanine-N(1))-methyltransferase complement(6916578..6917306) Rhodopirellula baltica SH 1 1790914 NP_870726.1 CDS rpsP NC_005027.1 6917303 6917743 R PMID: 6357787 PMID: 8730873 best DB hits: BLAST: pir:T05282; ribosomal protein S16, organellar - Arabidopsis; E=3e-15 gb:AAK05667.1; AE006387_10 (AE006387) 30S ribosomal protein S16; E=7e-14 ddbj:BAA97024.1; (AB024035) 30S ribosomal protein S16; E=1e-13 COG: BH2483; COG0228 Ribosomal protein S16; E=2e-14 PFAM: PF00886; Ribosomal protein S16; E=1.8e-20; 30S ribosomal protein S16 complement(6917303..6917743) Rhodopirellula baltica SH 1 1793446 NP_870727.1 CDS ffh NC_005027.1 6917834 6919309 R PMID: 6357787 PMID: 1279430 best DB hits: BLAST: pir:F72236; signal recognition particle protein - Thermotoga; E=2e-87 ddbj:BAB06203.1; (AP001515) signal recognition particle [Bacillus; E=2e-85 gb:AAF69242.1; AF173880_5 (AF173880) signal recognition particle; E=3e-84 COG: TM1565; COG0541 Signal recognition particle GTPase; E=2e-88 PFAM: PF02881; SRP54-type protein, helical b; E=8.8e-21 PF02223; Thymidylate kinase; E=0.33 PF00485; Phosphoribulokinase / Uridine; E=0.03; signal recognition particle protein complement(6917834..6919309) Rhodopirellula baltica SH 1 1795912 NP_870728.1 CDS RB12827 NC_005027.1 6919361 6919729 R signal peptide complement(6919361..6919729) Rhodopirellula baltica SH 1 1795003 NP_870729.1 CDS RB12829 NC_005027.1 6919813 6920292 D hypothetical protein 6919813..6920292 Rhodopirellula baltica SH 1 1793980 NP_870730.1 CDS RB12830 NC_005027.1 6920200 6920508 R hypothetical protein complement(6920200..6920508) Rhodopirellula baltica SH 1 1792816 NP_870731.1 CDS RB12831 NC_005027.1 6920532 6921326 R PMID: 8813763 best DB hits: BLAST: pir:G69148; dolichyl-phosphate mannose synthase related protein 1 -; E=2e-19 pir:D69148; dolichyl-phosphate mannose synthase related protein 2 -; E=5e-18 embl:CAB61668.1; (AL133213) glycosyl transferase.; E=7e-18 COG: MTH377; COG0463 Glycosyltransferases involved in cell wall; E=2e-20 PFAM: PF00535; Glycosyl transferase; E=1.8e-23; dolichyl-phosphate mannose synthase complement(6920532..6921326) Rhodopirellula baltica SH 1 1792760 NP_870732.1 CDS RB12833 NC_005027.1 6921305 6921634 D hypothetical protein 6921305..6921634 Rhodopirellula baltica SH 1 1794260 NP_870733.1 CDS RB12836 NC_005027.1 6921619 6921735 D hypothetical protein 6921619..6921735 Rhodopirellula baltica SH 1 1795882 NP_870734.1 CDS RB12837 NC_005027.1 6921732 6921929 D hypothetical protein 6921732..6921929 Rhodopirellula baltica SH 1 1790498 NP_870735.1 CDS rplA NC_005027.1 6921934 6922611 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 6921934..6922611 Rhodopirellula baltica SH 1 1794830 NP_870736.1 CDS rplJ NC_005027.1 6922785 6923309 D PMID: 8969501 best DB hits: BLAST: pir:T01743; ribosomal protein L10, chloroplast - common tobacco; E=3e-08 swissprot:P42923; RL10_BACSU 50S RIBOSOMAL PROTEIN L10 (BL5) (COLD; E=3e-08 gb:AAK05367.1; AE006359_5 (AE006359) 50S ribosomal protein L10; E=8e-08 COG: BS_rplJ; COG0244 Ribosomal protein L10; E=3e-09; 50S ribosomal protein L10 6922785..6923309 Rhodopirellula baltica SH 1 1793863 NP_870737.1 CDS rplL NC_005027.1 6923401 6923823 D PMID: 10488095 best DB hits: BLAST: pir:S30199; ribosomal protein L12.1 precursor, chloroplast - rye; E=3e-09 embl:CAA44226.1; (X62368) ribosomal protein L12-1a [Nicotiana; E=2e-08 prf:0601198A; polymerase beta,RNA [Escherichia coli]; E=4e-08 COG: aq_1937; COG0222 Ribosomal protein L7/L12; E=3e-07 PFAM: PF00542; Ribosomal protein L7/L12 C-term; E=4.6e-28; 50S ribosomal protein L7/L12 6923401..6923823 Rhodopirellula baltica SH 1 1790938 NP_870738.1 CDS RB12843 NC_005027.1 6923880 6923996 R hypothetical protein complement(6923880..6923996) Rhodopirellula baltica SH 1 1795696 NP_870739.1 CDS RB12844 NC_005027.1 6924096 6925124 D hypothetical protein 6924096..6925124 Rhodopirellula baltica SH 1 1794805 NP_870740.1 CDS RB12847 NC_005027.1 6925127 6925516 R hypothetical protein complement(6925127..6925516) Rhodopirellula baltica SH 1 1795921 NP_870741.1 CDS RB12850 NC_005027.1 6925624 6926553 R PMID: 11759840 best DB hits: BLAST: embl:CAB93418.1; (AL357524) transposase [Streptomyces; E=0.60; transposase complement(6925624..6926553) Rhodopirellula baltica SH 1 1793554 NP_870742.1 CDS RB12851 NC_005027.1 6926556 6926885 D hypothetical protein 6926556..6926885 Rhodopirellula baltica SH 1 1793288 NP_870743.1 CDS RB12853 NC_005027.1 6926870 6926998 R hypothetical protein complement(6926870..6926998) Rhodopirellula baltica SH 1 1794365 NP_870744.1 CDS fmt NC_005027.1 6927002 6928009 R PMID: 1624424 PMID: 8432722 best DB hits: BLAST: swissprot:P23882; FMT_ECOLI METHIONYL-TRNA FORMYLTRANSFERASE; E=1e-44 gb:AAG58409.1; AE005556_2 (AE005556); E=3e-44 pdb:2FMT; A Chain A, Methionyl-Trnafmet Formyltransferase; E=6e-44 COG: fmt; COG0223 Methionyl-tRNA formyltransferase; E=1e-45 PFAM: PF00551; Formyl transferase; E=6e-35 PF02911; Formyl transferase, C-terminal; E=6.3e-29; methionyl-tRNA formyltransferase complement(6927002..6928009) Rhodopirellula baltica SH 1 1794854 NP_870745.1 CDS def NC_005027.1 6927987 6928592 R PMID: 8112305 best DB hits: BLAST: gb:AAG33972.1; (AF250958) peptide deformylase-like protein; E=4e-31 gb:AAG33980.1; AF269165_1 (AF269165) peptide deformylase; E=6e-31 pir:T48639; hypothetical protein T15N1.150 - Arabidopsis thaliana; E=1e-30 COG: PA0019; COG0242 N-formylmethionyl-tRNA deformylase; E=1e-26 PFAM: PF01327; Polypeptide deformylase; E=1.2e-59; peptide deformylase complement(6927987..6928592) Rhodopirellula baltica SH 1 1793749 NP_870746.1 CDS oppF NC_005027.1 6928649 6929710 R PMID: 1738314 PMID: 9097039 best DB hits: BLAST: embl:CAC05751.1; (AL391751) peptide transport system; E=6e-96 ddbj:BAB07364.1; (AP001519) oligopeptide ABC transporter; E=1e-92 pir:B72424; oligopeptide ABC transporter ATP-binding protein -; E=3e-90 COG: BH3645; COG1124 ABC-type dipeptide/oligopeptide/nickel transport; E=1e-93 VNG2526G; COG1123 ATPase components of uncharacterized ABC-type; E=3e-84 BH0027; COG1124 ABC-type dipeptide/oligopeptide/nickel transport; E=3e-84 PFAM: PF00485; Phosphoribulokinase / Uridine; E=0.17 PF00004; ATPase associated with; E=0.029 PF00006; ATP synthase alpha/beta famil; E=0.25; oligopeptide transport ATP-binding protein OppF complement(6928649..6929710) Rhodopirellula baltica SH 1 1793692 NP_870747.1 CDS oppD NC_005027.1 6929686 6930771 R PMID: 1738314 PMID: 1901616 best DB hits: BLAST: gb:AAG22037.1; AF305387_4 (AF305387) OppD [Bacillus thuringiensis]; E=2e-95 pir:H75380; peptide ABC transporter ATP-binding protein -; E=8e-93 gb:AAA62691.1; (M57689) sporulation protein [Bacillus subtilis]; E=1e-92 COG: DR1568; COG0444 ABC-type dipeptide/oligopeptide/nickel transport; E=7e-94 Rv1281c; COG1123 ATPase components of uncharacterized ABC-type; E=5e-80 TM1064; COG0444 ABC-type dipeptide/oligopeptide/nickel transport; E=1e-78 PFAM: PF01580; FtsK/SpoIIIE family; E=0.62 PF00005; ABC transporter; E=2.3e-63; oligopeptide transport ATP-binding protein OppD complement(6929686..6930771) Rhodopirellula baltica SH 1 1795687 NP_870748.1 CDS oppC NC_005027.1 6930768 6932003 R PMID: 1738314 PMID: 1901616 best DB hits: BLAST: pir:D82242; oligopeptide ABC transporter, permease VC1093; E=4e-50 swissprot:P45053; OPPC_HAEIN OLIGOPEPTIDE TRANSPORT SYSTEM; E=1e-46 pir:D70141; oligopeptide ABC transporter, permease (oppC-1); E=5e-46 COG: VC1093; COG1173 ABC-type dipeptide/oligopeptide/nickel transport; E=4e-51 PFAM: PF00528; Binding-protein-dependent transpor; E=9.1e-10; oligopeptide transport system permease OppC complement(6930768..6932003) Rhodopirellula baltica SH 1 1794594 NP_870749.1 CDS oppB NC_005027.1 6932000 6932929 R PMID: 1738314 PMID: 2187863 best DB hits: BLAST: ddbj:BAA14776.1; (D90763) Oligopeptide transport system permease; E=8e-56 swissprot:P31132; OPPB_ECOLI OLIGOPEPTIDE TRANSPORT SYSTEM; E=1e-55 pir:B38447; oligopeptide permease oppB homolog - Bacillus subtilis; E=2e-55 COG: oppB; COG0601 ABC-type dipeptide/oligopeptide/nickel transport; E=1e-56 PFAM: PF00528; Binding-protein-dependent transpor; E=0.00032; oligopeptide transport system permease OppB complement(6932000..6932929) Rhodopirellula baltica SH 1 1795631 NP_870750.1 CDS oppA NC_005027.1 6932926 6934893 R PMID: 1738314 PMID: 1901616 best DB hits: BLAST: swissprot:P24141; OPPA_BACSU OLIGOPEPTIDE-BINDING PROTEIN OPPA; E=1e-60 pir:A38447; oligopeptide ABC transport system substrate-binding; E=1e-60 embl:CAB96044.1; (AJ250012) surface antigen [Borrelia afzelii]; E=6e-60 COG: BS_oppA; COG0747 ABC-type dipeptide/oligopeptide/nickel transport; E=1e-61 PFAM: PF00496; Bacterial extracellular solute-bind; E=1.3e-13; oligopeptide-binding protein OppA complement(6932926..6934893) Rhodopirellula baltica SH 1 1794382 NP_870751.1 CDS RB12863 NC_005027.1 6934850 6935002 D hypothetical protein 6934850..6935002 Rhodopirellula baltica SH 1 1793606 NP_870752.1 CDS aspC NC_005027.1 6935038 6936231 R catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase complement(6935038..6936231) Rhodopirellula baltica SH 1 1794985 NP_870753.1 CDS RB12866 NC_005027.1 6936276 6937397 D PMID: 8905231 best DB hits: BLAST: swissprot:P73079; YK42_SYNY3 HYPOTHETICAL 31.9 KD PROTEIN SLR2042; E=5e-19 pir:B83141; conserved hypothetical protein PA4030 [imported] -; E=3e-13 pir:C64962; probable membrane protein b1976 - Escherichia coli; E=5e-08 COG: slr2042; COG3228 Uncharacterized BCR; E=5e-20 TP0379; COG0653 Preprotein translocase subunit SecA (ATPase, RNA; E=0.001 yecA; COG3318 Predicted metal-binding protein related to the; E=0.002 PFAM: PF02810; SEC-C motif; E=5.3e-08; hypothetical protein 6936276..6937397 Rhodopirellula baltica SH 1 1795684 NP_870754.1 CDS RB12870 NC_005027.1 6937519 6937905 D hypothetical protein 6937519..6937905 Rhodopirellula baltica SH 1 1793703 NP_870755.1 CDS RB12873 NC_005027.1 6937857 6938225 D hypothetical protein 6937857..6938225 Rhodopirellula baltica SH 1 1791474 NP_870756.1 CDS RB12874 NC_005027.1 6938177 6938368 D hypothetical protein 6938177..6938368 Rhodopirellula baltica SH 1 1793994 NP_870757.1 CDS RB12875 NC_005027.1 6938351 6939466 R hypothetical protein complement(6938351..6939466) Rhodopirellula baltica SH 1 1794758 NP_870758.1 CDS RB12877 NC_005027.1 6939536 6939817 R hypothetical protein complement(6939536..6939817) Rhodopirellula baltica SH 1 1790869 NP_870759.1 CDS RB12879 NC_005027.1 6939821 6939985 R hypothetical protein complement(6939821..6939985) Rhodopirellula baltica SH 1 1795365 NP_870760.1 CDS RB12881 NC_005027.1 6940037 6940450 R PMID: 7699720 best DB hits: BLAST: gb:AAD20723.1; (AF051157) response regulator homolog OmpR [Vibrio; E=5e-09 pir:C82042; transcriptional regulator OmpR VC2714 [imported] - Vibrio; E=6e-09 pir:S42745; nitrogen assimilation regulatory protein ntrC -; E=9e-09 COG: VC2714; COG0745 Response regulators consisting of a CheY-like; E=6e-10 ompR; COG0745 Response regulators consisting of a CheY-like receiver; E=3e-09 slr0322_2; COG0784 CheY-like receiver domains; E=7e-09 PFAM: PF00072; Response regulator receiver doma; E=1.7e-20; two-component response regulator complement(6940037..6940450) Rhodopirellula baltica SH 1 1791640 NP_870761.1 CDS RB12882 NC_005027.1 6940549 6941553 D best DB hits: PFAM: PF00515; TPR Domain; E=0.058; hypothetical protein 6940549..6941553 Rhodopirellula baltica SH 1 1792206 NP_870762.1 CDS rluD NC_005027.1 6941550 6942554 D PMID: 9660827 best DB hits: BLAST: ddbj:BAB06261.1; (AP001515) BH2542~unknown conserved protein; E=1e-53 swissprot:O50310; YBC5_CHLVI HYPOTHETICAL 36.7 KD PROTEIN IN BCHI; E=1e-53 pir:F72373; conserved hypothetical protein - Thermotoga maritima; E=2e-53 COG: BH2542; COG0564 Pseudouridylate synthases, 23S RNA-specific; E=9e-55 PFAM: PF01479; S4 domain; E=0.0017 PF00849; RNA pseudouridylate synthase; E=7.8e-61; ribosomal large subunit pseudouridine synthase 6941550..6942554 Rhodopirellula baltica SH 1 1790244 NP_870763.1 CDS RB12886 NC_005027.1 6942523 6943383 D PMID: 10567266 best DB hits: BLAST: gb:AAF12561.1; AE001826_30 (AE001826) conserved hypothetical; E=4e-13 swissprot:P76262; YOAE_ECOLI HYPOTHETICAL 56.5 KD PROTEIN IN; E=2e-12 gb:AAG56805.1; AE005404_8 (AE005404) transport protein; E=2e-12 COG: DRB0131; COG0861 Membrane protein TerC, possibly involved in; E=4e-14 ygdQ; COG0861 Membrane protein TerC, possibly involved in tellurium; E=7e-10 yegH_1; COG0861 Membrane protein TerC, possibly involved in; E=5e-09; hypothetical protein 6942523..6943383 Rhodopirellula baltica SH 1 1795377 NP_870764.1 CDS RB12890 NC_005027.1 6943463 6944401 D hypothetical protein 6943463..6944401 Rhodopirellula baltica SH 1 1795470 NP_870765.1 CDS RB12891 NC_005027.1 6944411 6945187 D best DB hits: BLAST: gb:AAC14880.1; (AF060080) hypothetical protein [Chlorobium; E=1e-06 pir:C75001; hypothetical protein PAB1341 - Pyrococcus abyssi (strain; E=3e-06 embl:CAB66204.1; (AL136502) hypothetical protein SCF43.15c.; E=5e-05 COG: PAB1341; COG2120 Uncharacterized proteins, LmbE homologs; E=3e-07 PFAM: PF02585; Uncharacterized LmbE-like protein, C; E=1.1e-05; hypothetical protein 6944411..6945187 Rhodopirellula baltica SH 1 1793686 NP_870766.1 CDS RB12892 NC_005027.1 6945243 6945632 D hypothetical protein 6945243..6945632 Rhodopirellula baltica SH 1 1792368 NP_870767.1 CDS RB12895 NC_005027.1 6945636 6946097 D hypothetical protein 6945636..6946097 Rhodopirellula baltica SH 1 1793471 NP_870768.1 CDS RB12897 NC_005027.1 6946117 6947028 R signal peptide complement(6946117..6947028) Rhodopirellula baltica SH 1 1794671 NP_870769.1 CDS RB12902 NC_005027.1 6947212 6948129 R PMID: 7774814 best DB hits: BLAST: pir:T36501; probable serinethreonine protein kinase - Streptomyces; E=1e-18 pir:H75566; probable serinethreonine protein kinase - Deinococcus; E=3e-17 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=6e-17 COG: DR0058_1; COG0515 Serine/threonine protein kinases; E=3e-18 PFAM: PF00231; ATP synthase; E=0.83 PF00069; Protein kinase domain; E=5.8e-27; serine/threonine-protein kinase complement(6947212..6948129) Rhodopirellula baltica SH 1 1791309 NP_870770.1 CDS accD NC_005027.1 6948133 6949071 R PMID: 1355086 best DB hits: BLAST: swissprot:Q54776; ACCD_SYNP7 ACETYL-COENZYME A CARBOXYLASE; E=1e-71 swissprot:Q57417; ACCD_SYNY3 ACETYL-COENZYME A CARBOXYLASE; E=1e-69 gb:AAC08084.1; (U38804) acetyl-CoA carboxylase carboxytransferase; E=2e-68 COG: sll0336; COG0777 Acetyl-CoA carboxylase beta subunit; E=1e-70 PFAM: PF00790; VHS domain; E=0.27 PF01039; Carboxyl transferase domain; E=0.037; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta complement(6948133..6949071) Rhodopirellula baltica SH 1 1790530 NP_870771.1 CDS RB12905 NC_005027.1 6949080 6950939 R PMID: 1896019 best DB hits: BLAST: swissprot:P27819; ILV3_BRANA ACETOLACTATE SYNTHASE III,; E=1e-167 swissprot:P27818; ILV1_BRANA ACETOLACTATE SYNTHASE I, CHLOROPLAST; E=1e-167 pir:S15004; acetolactate synthase (EC 4.1.3.18) 2 precursor - rape; E=1e-167 COG: AF1720; COG0028 Thiamine pyrophosphate-requiring enzymes; E=1e-129 ilvG; COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate; E=1e-123 slr2088; COG0028 Thiamine pyrophosphate-requiring enzymes; E=1e-121 PFAM: PF02776; Thiamine pyrophosphate enzyme,; E=9.8e-87 PF00205; Thiamine pyrophosphate enzyme,; E=1.2e-55 PF02775; Thiamine pyrophosphate enzyme,; E=7.1e-89; acetolactate synthase III [precursor] complement(6949080..6950939) Rhodopirellula baltica SH 1 1793417 NP_870772.1 CDS RB12907 NC_005027.1 6950775 6951461 D best DB hits: PFAM: PF02537; CrcB-like protein; E=0.02; hypothetical protein 6950775..6951461 Rhodopirellula baltica SH 1 1790068 NP_870773.1 CDS RB12908 NC_005027.1 6951125 6954388 D PMID: 10984043 best DB hits: BLAST: pir:D83260; hypothetical protein PA3080 [imported] - Pseudomonas; E=1e-04 gb:AAK01518.1; (AF241171) oxidoreductase [Pseudomonas; E=0.38 PFAM: PF02012; BNR repeat; E=0.027; hypothetical protein 6951125..6954388 Rhodopirellula baltica SH 1 1792856 NP_870774.1 CDS RB12915 NC_005027.1 6954389 6955507 D hypothetical protein 6954389..6955507 Rhodopirellula baltica SH 1 1791834 NP_870775.1 CDS RB12918 NC_005027.1 6955674 6957020 R signal peptide complement(6955674..6957020) Rhodopirellula baltica SH 1 1793023 NP_870776.1 CDS tkt NC_005027.1 6957196 6959247 D PMID: 7859749 best DB hits: BLAST: swissprot:P45694; TKT_BACSU TRANSKETOLASE ----- pir: G69723; E=1e-171 ddbj:BAB06071.1; (AP001515) transketolase [Bacillus halodurans]; E=1e-169 swissprot:Q43848; TKTC_SOLTU TRANSKETOLASE, CHLOROPLAST PRECURSOR; E=1e-164 COG: BS_tkt; COG0021 Transketolase; E=1e-172 PFAM: PF00456; Transketolase, thiamine dipho; E=1.1e-160 PF02779; Transketolase, central domain; E=1.2e-77 PF02780; Transketolase, C-terminal dom; E=1.1e-49; transketolase 6957196..6959247 Rhodopirellula baltica SH 1 1790197 NP_870777.1 CDS purA NC_005027.1 6959448 6960761 D PMID: 3058695 PMID: 10364182 best DB hits: BLAST: swissprot:P73290; PURA_SYNY3 ADENYLOSUCCINATE SYNTHETASE; E=8e-98 swissprot:Q9X8P6; PURA_STRCO ADENYLOSUCCINATE SYNTHETASE; E=7e-94 swissprot:O08381; PURA_MYCTU ADENYLOSUCCINATE SYNTHETASE; E=1e-93 COG: Rv0357c; COG0104 Adenylosuccinate synthase; E=1e-94 PFAM: PF00709; Adenylosuccinate synthetase; E=5.7e-66; adenylosuccinate synthetase 6959448..6960761 Rhodopirellula baltica SH 1 1794174 NP_870778.1 CDS RB12925 NC_005027.1 6960879 6960998 R hypothetical protein complement(6960879..6960998) Rhodopirellula baltica SH 1 1792706 NP_870779.1 CDS RB12926 NC_005027.1 6961042 6961533 R hypothetical protein complement(6961042..6961533) Rhodopirellula baltica SH 1 1791380 NP_870780.1 CDS RB12928 NC_005027.1 6961579 6962727 D PMID: 9324260 best DB hits: BLAST: pir:T35155; hypothetical protein SC5A7.06c SC5A7.06c - Streptomyces; E=2e-36 gb:AAF26905.1; AF210843_2 (AF210843) unknown [Sorangium; E=9e-34 swissprot:Q11037; YD67_MYCTU HYPOTHETICAL 41.3 KDA PROTEIN RV1367C; E=4e-31 COG: Rv1367c; COG1680 Beta-lactamase class C and other penicillin binding; E=3e-32; beta-lactamase or penicillin-binding protein 6961579..6962727 Rhodopirellula baltica SH 1 1794800 NP_870781.1 CDS RB12932 NC_005027.1 6963015 6963242 R hypothetical protein complement(6963015..6963242) Rhodopirellula baltica SH 1 1794793 NP_870782.1 CDS RB12934 NC_005027.1 6963268 6964029 R PMID: 9537320 best DB hits: BLAST: swissprot:O66631; Y274_AQUAE HYPOTHETICAL PROTEIN AQ_274 -----; E=4e-28 embl:CAA75617.1; (Y15422) hypothetical protein [Lactococcus; E=1e-26 pir:B72217; conserved hypothetical protein - Thermotoga maritima; E=2e-26 COG: aq_274; COG0325 Predicted enzyme with a TIM-barrel fold; E=4e-29 PFAM: PF01168; Uncharacterized protein family UPF00; E=9e-11; hypothetical protein complement(6963268..6964029) Rhodopirellula baltica SH 1 1795597 NP_870783.1 CDS RB12936 NC_005027.1 6964130 6965872 R PMID: 10567266 best DB hits: BLAST: pir:H75280; conserved hypothetical protein - Deinococcus radiodurans; E=5e-27 swissprot:P71551; Y959_MYCTU HYPOTHETICAL 74.6 KDA PROTEIN RV0959; E=5e-21 gb:AAB89815.1; (AE001004) A. fulgidus predicted coding region; E=0.013 COG: AF1444; COG2304 Protein containing von Willebrand factor (vWF) type; E=0.001; hypothetical protein complement(6964130..6965872) Rhodopirellula baltica SH 1 1795685 NP_870784.1 CDS RB12940 NC_005027.1 6966246 6966536 D PMID: 2824781 best DB hits: BLAST: gb:AAG58100.1; AE005527_3 (AE005527) unknown protein encoded by; E=0.002 gb:AAG53987.1; AF327445_1 (AF327445) transposase A; E=0.003 gb:AAF28119.1; AF153317_15 (AF153317) InsA [Shigella; E=0.007 COG: PA1937; COG2963 Transposase; E=0.004 PFAM: PF01381; Helix-turn-helix; E=0.53 PF01527; Transposase; E=6.1e-18; transposase 6966246..6966536 Rhodopirellula baltica SH 1 1795582 NP_870785.1 CDS RB12941 NC_005027.1 6966539 6967417 D PMID: 2824781 best DB hits: BLAST: gb:AAA88919.1; (U13013) ORFB [Leptospira interrogans]; E=3e-47 gb:AAA88916.1; (U13012) ORFB [Leptospira interrogans]; E=1e-46 gb:AAC05649.1; (AF038931) probable transposase-related protein; E=1e-45 COG: DRB0019.2; COG2801 transposase; E=1e-35 PFAM: PF00665; Integrase core domain; E=4.8e-40; transposase 6966539..6967417 Rhodopirellula baltica SH 1 1793181 NP_870786.1 CDS RB12942 NC_005027.1 6967507 6969009 R hypothetical protein complement(6967507..6969009) Rhodopirellula baltica SH 1 1791339 NP_870787.1 CDS RB12945 NC_005027.1 6969132 6969560 D PMID: 2215213 best DB hits: BLAST: swissprot:P45388; YAEJ_PSEPU HYPOTHETICAL 15.2 KD PROTEIN IN PCAJ; E=3e-16 embl:CAA63804.1; (X93605) hypothetical protein YAEJ [Zymomonas; E=7e-15 pir:A83538; conserved hypothetical protein PA0868 [imported] -; E=4e-12 COG: PA0868; COG1186 Protein chain release factor B; E=4e-13 sll1110; COG0216 Protein chain release factor A; E=0.010 PFAM: PF00472; Peptidyl-tRNA hydrolase domain; E=2.2e-09; peptidyl-tRNA hydrolase domain protein 6969132..6969560 Rhodopirellula baltica SH 1 1791714 NP_870788.1 CDS RB12946 NC_005027.1 6969668 6970402 D best DB hits: PFAM: PF02151; UvrB/uvrC motif; E=0.0011; hypothetical protein 6969668..6970402 Rhodopirellula baltica SH 1 1790438 NP_870789.1 CDS RB12949 NC_005027.1 6970418 6971830 D PMID: 8757734 best DB hits: BLAST: gb:AAB38420.1; (L39938) histidine protein kinase [Sinorhizobium; E=2e-16 pir:E83083; probable two-component sensor PA4494 [imported] -; E=3e-16 gb:AAA93222.1; (U22925) RegB [Rhodobacter sphaeroides]; E=2e-12 COG: PA4494; COG0642 Sensory transduction histidine kinases; E=2e-17 PFAM: PF00512; His Kinase A (phosphoacceptor; E=0.011 PF02518; Histidine kinase-, DNA gyrase; E=1.2e-28; histidine protein kinase 6970418..6971830 Rhodopirellula baltica SH 1 1793285 NP_870790.1 CDS RB12952 NC_005027.1 6972002 6972667 D PMID: 7699720 best DB hits: BLAST: pir:D83083; probable two-component response regulator PA4493; E=8e-30 gb:AAF87208.1; AF228577_2 (AF228577) ActR [Rhizobium leguminosarum; E=8e-30 swissprot:Q52913; ACTR_RHIME ACID TOLERANCE REGULATORY PROTEIN; E=1e-29 COG: PA4493; COG0784 CheY-like receiver domains; E=8e-31 TP0519; COG2204 AAA superfamily ATPases with N-terminal receiver; E=3e-12 BH3787; COG0784 CheY-like receiver domains; E=8e-11 PFAM: PF00072; Response regulator receiver doma; E=2.9e-25; two-component system, regulatory protein 6972002..6972667 Rhodopirellula baltica SH 1 1793752 NP_870791.1 CDS RB12953 NC_005027.1 6972882 6973667 R signal peptide complement(6972882..6973667) Rhodopirellula baltica SH 1 1792766 NP_870792.1 CDS RB12959 NC_005027.1 6973882 6974205 R hypothetical protein complement(6973882..6974205) Rhodopirellula baltica SH 1 1793468 NP_870793.1 CDS RB12961 NC_005027.1 6974274 6974942 R signal peptide complement(6974274..6974942) Rhodopirellula baltica SH 1 1792535 NP_870794.1 CDS RB12962 NC_005027.1 6975006 6975179 D hypothetical protein 6975006..6975179 Rhodopirellula baltica SH 1 1790437 NP_870795.1 CDS RB12963 NC_005027.1 6975121 6976236 R best DB hits: BLAST: swissprot:O34617; YLON_BACSU HYPOTHETICAL 41.6 KDA PROTEIN IN; E=1e-73 pir:B81098; conserved hypothetical protein NMB1308 [imported] -; E=1e-69 pir:F81843; conserved hypothetical protein NMA1522 [imported] -; E=2e-69 COG: BS_yloN; COG0820 Predicted Fe-S oxidoreductase; E=1e-74; Fe-S oxidoreductase complement(6975121..6976236) Rhodopirellula baltica SH 1 1793025 NP_870796.1 CDS RB12965 NC_005027.1 6976376 6977047 R signal peptide complement(6976376..6977047) Rhodopirellula baltica SH 1 1793321 NP_870797.1 CDS RB12968 NC_005027.1 6977141 6979138 D signal peptide 6977141..6979138 Rhodopirellula baltica SH 1 1790085 NP_870798.1 CDS RB12971 NC_005027.1 6979262 6979462 R hypothetical protein complement(6979262..6979462) Rhodopirellula baltica SH 1 1794198 NP_870799.1 CDS RB12972 NC_005027.1 6979436 6979588 D hypothetical protein 6979436..6979588 Rhodopirellula baltica SH 1 1790187 NP_870800.1 CDS RB12974 NC_005027.1 6979647 6979847 R hypothetical protein complement(6979647..6979847) Rhodopirellula baltica SH 1 1793198 NP_870801.1 CDS RB12975 NC_005027.1 6979844 6980053 R hypothetical protein complement(6979844..6980053) Rhodopirellula baltica SH 1 1792981 NP_870802.1 CDS RB12978 NC_005027.1 6980057 6980722 R hypothetical protein complement(6980057..6980722) Rhodopirellula baltica SH 1 1795240 NP_870803.1 CDS RB12982 NC_005027.1 6980707 6981480 R hypothetical protein complement(6980707..6981480) Rhodopirellula baltica SH 1 1790231 NP_870804.1 CDS RB12984 NC_005027.1 6981461 6983911 R hypothetical protein complement(6981461..6983911) Rhodopirellula baltica SH 1 1792074 NP_870805.1 CDS RB12989 NC_005027.1 6983806 6984744 R hypothetical protein complement(6983806..6984744) Rhodopirellula baltica SH 1 1792648 NP_870806.1 CDS RB12994 NC_005027.1 6984741 6986603 R best DB hits: BLAST: gb:AAG56658.1; AE005390_5 (AE005390) oxidoreductase, Fe-S; E=2e-16 pir:G64924; nrfC protein homolog b1671 - Escherichia coli -----; E=4e-16 gb:AAG57820.1; AE005499_7 (AE005499) involved in electron; E=3e-15 COG: ydhX; COG0437 Fe-S-cluster-containing hydrogenase components 1; E=4e-17 hydN; COG1142 Fe-S-cluster-containing hydrogenase components 2; E=3e-16 AF0157; COG0437 Fe-S-cluster-containing hydrogenase components 1; E=8e-14 PFAM: PF00027; Cyclic nucleotide-binding domain; E=0.0017 PF00037; 4Fe-4S binding domain; E=0.31; oxidoreductase, Fe-S subunit complement(6984741..6986603) Rhodopirellula baltica SH 1 1793114 NP_870807.1 CDS RB12997 NC_005027.1 6986566 6987102 D hypothetical protein 6986566..6987102 Rhodopirellula baltica SH 1 1793441 NP_870808.1 CDS RB12998 NC_005027.1 6986660 6987166 D hypothetical protein 6986660..6987166 Rhodopirellula baltica SH 1 1793958 NP_870809.1 CDS RB12999 NC_005027.1 6986738 6987157 R hypothetical protein complement(6986738..6987157) Rhodopirellula baltica SH 1 1791831 NP_870810.1 CDS RB13001 NC_005027.1 6987235 6987843 D hypothetical protein 6987235..6987843 Rhodopirellula baltica SH 1 1795595 NP_870811.1 CDS RB13002 NC_005027.1 6987708 6988877 R PMID: 10731132 best DB hits: BLAST: gb:AAF50733.1; (AE003564) CG10487 gene product [Drosophila; E=0.003 ddbj:BAA34290.1; (AB014769) glutaminyl cyclase [Bothrops; E=0.005 embl:CAA50438.1; (X71125) glutaminyl-peptide cyclotransferase; E=0.44; glutaminyl cyclase complement(6987708..6988877) Rhodopirellula baltica SH 1 1792635 NP_870812.1 CDS RB13004 NC_005027.1 6989296 6989862 D hypothetical protein 6989296..6989862 Rhodopirellula baltica SH 1 1791013 NP_870813.1 CDS RB13005 NC_005027.1 6989994 6991808 D PMID: 8905232 best DB hits: BLAST: swissprot:P77234; YBEQ_ECOLI HYPOTHETICAL 37.3 KDA PROTEIN IN; E=8e-40 gb:AAD41587.1; AF057704_3 (AF057704) enhanced entry protein EnhC; E=1e-37 pir:T46587; hypothetical protein [imported] - Vogesella indigofera; E=1e-35 COG: ybeQ; COG0790 TPR repeat proteins; E=7e-41; hypothetical protein 6989994..6991808 Rhodopirellula baltica SH 1 1790226 NP_870814.1 CDS RB13007 NC_005027.1 6992010 6992489 D hypothetical protein 6992010..6992489 Rhodopirellula baltica SH 1 1794118 NP_870815.1 CDS RB13011 NC_005027.1 6992499 6993194 D hypothetical protein 6992499..6993194 Rhodopirellula baltica SH 1 1793969 NP_870816.1 CDS RB13012 NC_005027.1 6993210 6993407 D hypothetical protein 6993210..6993407 Rhodopirellula baltica SH 1 1793246 NP_870817.1 CDS RB13013 NC_005027.1 6993313 6994083 D signal peptide 6993313..6994083 Rhodopirellula baltica SH 1 1794637 NP_870818.1 CDS RB13015 NC_005027.1 6994107 6994286 R hypothetical protein complement(6994107..6994286) Rhodopirellula baltica SH 1 1793818 NP_870819.1 CDS RB13016 NC_005027.1 6994318 6994536 R hypothetical protein complement(6994318..6994536) Rhodopirellula baltica SH 1 1791188 NP_870820.1 CDS RB13017 NC_005027.1 6994546 6994938 D signal peptide 6994546..6994938 Rhodopirellula baltica SH 1 1793616 NP_870821.1 CDS RB13021 NC_005027.1 6995065 6995838 D PMID: 10731132 best DB hits: BLAST: gb:AAF82144.1; AC034256_8 (AC034256) Contains similarity to F-box; E=2e-07 gb:AAF44956.1; AE003406_161 (AE003416) symbol=BG:DS07108.4; E=1e-04 gb:AAF53475.1; (AE003648) BG:DS07108.4 gene product [Drosophila; E=1e-04; receptor protein kinase 6995065..6995838 Rhodopirellula baltica SH 1 1790579 NP_870822.1 CDS RB13024 NC_005027.1 6995860 6996282 D PMID: 8905231 best DB hits: BLAST: pir:S76466; hypothetical protein sll1853 - Synechocystis sp. (strain; E=6e-18; hypothetical protein 6995860..6996282 Rhodopirellula baltica SH 1 1790413 NP_870823.1 CDS RB13025 NC_005027.1 6996438 6997019 R PMID: 1444267 best DB hits: BLAST: pir:D83229; probable FAD-dependent monooxygenase PA3328 [imported] -; E=1e-07 pir:H70986; probable hyroxylase - Mycobacterium tuberculosis (strain; E=2e-07 pir:T35323; probable hydroxylase - Streptomyces coelicolor -----; E=1e-06 COG: PA3328; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related; E=1e-08 BS_yetM; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and; E=2e-04 PA2587; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related; E=5e-04 PFAM: PF01360; Monooxygenase; E=2.8e-12; monooxygenase complement(6996438..6997019) Rhodopirellula baltica SH 1 1794164 NP_870824.1 CDS RB13026 NC_005027.1 6997071 6997664 R PMID: 1444267 best DB hits: BLAST: pir:T37167; probable oxidoreductase - Streptomyces coelicolor; E=4e-08 gb:AAD25066.1; AF121000_13 (AF121000) oxidoreductase; E=0.001 pir:D83122; probable FAD-dependent monooxygenase PA4190 [imported] -; E=0.004 COG: PA4190; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related; E=4e-04 PFAM: PF01360; Monooxygenase; E=0.33; monooxygenase complement(6997071..6997664) Rhodopirellula baltica SH 1 1791726 NP_870825.1 CDS RB13028 NC_005027.1 6997640 6998122 D best DB hits: BLAST: ddbj:BAA92043.1; (AK002026) unnamed protein product [Homo; E=0.87 ddbj:BAB13962.1; (AK022105) unnamed protein product [Homo; E=0.87 ref:XP_012653.1; hypothetical protein FLJ11164 [Homo sapiens]; E=0.87; hypothetical protein 6997640..6998122 Rhodopirellula baltica SH 1 1790444 NP_870826.1 CDS RB13029 NC_005027.1 6997760 6998164 R hypothetical protein complement(6997760..6998164) Rhodopirellula baltica SH 1 1793754 NP_870827.1 CDS RB13030 NC_005027.1 6998161 6999186 R best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.24; signal peptide complement(6998161..6999186) Rhodopirellula baltica SH 1 1791853 NP_870828.1 CDS RB13032 NC_005027.1 6999266 7000897 R PMID: 9384377 best DB hits: BLAST: pir:E69759; hypothetical protein ycgR - Bacillus subtilis -----; E=5e-06 ddbj:BAB05237.1; (AP001512) BH1518~unknown conserved protein; E=2e-04 pir:H70420; conserved hypothetical protein aq_1388 - Aquifex; E=6e-04 COG: BS_ycgR; COG0701 Predicted permeases; E=4e-07; permease complement(6999266..7000897) Rhodopirellula baltica SH 1 1793354 NP_870829.1 CDS RB13035 NC_005027.1 7000894 7001859 R hypothetical protein complement(7000894..7001859) Rhodopirellula baltica SH 1 1792942 NP_870830.1 CDS RB13037 NC_005027.1 7001856 7002803 R PMID: 10567266 best DB hits: BLAST: pir:H72289; hypothetical protein TM1132 - Thermotoga maritima; E=2e-67 pir:B71126; hypothetical protein PH0776 - Pyrococcus horikoshii; E=2e-67 ddbj:BAB04323.1; (AP001509) methanol dehydrogenase regulatory; E=8e-67 COG: TM1132; COG0714 MoxR-like ATPases; E=2e-68 PFAM: PF00004; ATPase associated with va; E=0.00018 PF01078; Magnesium chelatase, subunit Chl; E=1.5e-09; MoxR-related protein complement(7001856..7002803) Rhodopirellula baltica SH 1 1790759 NP_870831.1 CDS RB13038 NC_005027.1 7002800 7005061 R PMID: 10452618 best DB hits: BLAST: pir:D75012; hypothetical protein PAB1274 - Pyrococcus abyssi (strain; E=3e-04 gb:AAB91268.1; (AE001110) A. fulgidus predicted coding region; E=0.006 pir:F70464; hypothetical protein aq_1912 - Aquifex aeolicus -----; E=0.011 COG: PAB1274_1; COG1305 transglutaminases, cysteine; E=4e-04 PFAM: PF02553; Cobalt transport protein compo; E=0.37 PF01841; Transglutaminase-like superfam; E=0.00013; transglutaminase complement(7002800..7005061) Rhodopirellula baltica SH 1 1792768 NP_870832.1 CDS RB13042 NC_005027.1 7004997 7006247 R best DB hits: BLAST: pir:T34965; probable membrane protein - Streptomyces coelicolor; E=3e-08 ddbj:BAB04451.1; (AP001509) BH0732~unknown conserved protein in; E=0.002 pir:H71125; hypothetical protein PH0774 - Pyrococcus horikoshii; E=0.012 COG: BH0732; COG1721 Uncharacterized ACR; E=1e-04 PFAM: PF01882; Protein of unknown function DUF58; E=7.1e-10; hypothetical protein complement(7004997..7006247) Rhodopirellula baltica SH 1 1795010 NP_870833.1 CDS RB13044 NC_005027.1 7006299 7006790 R signal peptide complement(7006299..7006790) Rhodopirellula baltica SH 1 1791059 NP_870834.1 CDS yfgL NC_005027.1 7007007 7008356 D best DB hits: BLAST: swissprot:P77774; YFGL_ECOLI HYPOTHETICAL 41.9 KD PROTEIN IN; E=0.006 gb:AAG57622.1; AE005480_9 (AE005480) dehydrogenase; E=0.007 gb:AAG31169.1; (AF314961) unknown [Salmonella typhimurium]; E=0.056 COG: yfgL; COG1520 Uncharacterized proteins of WD40-like repeat family; E=6e-04; hypothetical protein 7007007..7008356 Rhodopirellula baltica SH 1 1793019 NP_870835.1 CDS RB13051 NC_005027.1 7008357 7008560 R hypothetical protein complement(7008357..7008560) Rhodopirellula baltica SH 1 1793857 NP_870836.1 CDS RB13053 NC_005027.1 7008596 7009024 D signal peptide 7008596..7009024 Rhodopirellula baltica SH 1 1790778 NP_870837.1 CDS RB13056 NC_005027.1 7009080 7009295 D hypothetical protein 7009080..7009295 Rhodopirellula baltica SH 1 1790346 NP_870838.1 CDS RB13057 NC_005027.1 7009155 7009412 R hypothetical protein complement(7009155..7009412) Rhodopirellula baltica SH 1 1792685 NP_870839.1 CDS RB13059 NC_005027.1 7009452 7009796 D signal peptide 7009452..7009796 Rhodopirellula baltica SH 1 1794383 NP_870840.1 CDS RB13062 NC_005027.1 7009944 7010369 D PMID: 11259647; signal peptide 7009944..7010369 Rhodopirellula baltica SH 1 1792551 NP_870841.1 CDS RB13063 NC_005027.1 7010406 7011494 D hypothetical protein 7010406..7011494 Rhodopirellula baltica SH 1 1793009 NP_870842.1 CDS RB13066 NC_005027.1 7011573 7013345 D hypothetical protein 7011573..7013345 Rhodopirellula baltica SH 1 1791233 NP_870843.1 CDS RB13068 NC_005027.1 7013342 7014841 D best DB hits: PFAM: PF02271; Ubiquinol-cytochrome C reductase com; E=0.21; hypothetical protein 7013342..7014841 Rhodopirellula baltica SH 1 1793868 NP_870844.1 CDS RB13071 NC_005027.1 7014838 7016046 D PMID: 9054507 best DB hits: BLAST: pir:F83108; hypothetical protein PA4303 [imported] - Pseudomonas; E=2e-12 embl:CAA06604.1; (AJ005576) MinD protein [Streptomyces griseus]; E=2e-10 embl:CAB92599.1; (AL356813) septum site-determining; E=4e-10 COG: DR0013; COG1192 ATPases involved in chromosome partitioning; E=2e-09 BH2436; COG0455 ATPases involved in chromosome partitioning; E=2e-07 HP0331; COG2894 Septum formation inhibitor-activating ATPase; E=4e-07 PFAM: PF00142; 4Fe-4S iron sulfur cluster bindin; E=0.27; chromosome partitioning ATPase 7014838..7016046 Rhodopirellula baltica SH 1 1790614 NP_870845.1 CDS RB13073 NC_005027.1 7016043 7017452 D PMID: 7934814 best DB hits: BLAST: gb:AAB36933.1; (U77780) secretory protein kinase [Chlorobium; E=2e-98 gb:AAF40195.1; AF229646_7 (AF229646) CpaF [Caulobacter crescentus]; E=2e-92 gb:AAG33866.1; AF317389_1 (AF317389) type IV NTPase; E=4e-86 COG: PA4302; COG0630 Predicted ATPases involved in pili and flagella; E=2e-78 PFAM: PF01580; FtsK/SpoIIIE family; E=0.13 PF01443; Viral (Superfamily 1) RNA hel; E=0.067 PF00437; Bacterial type II secretion s; E=2.4e-24; secretory protein 7016043..7017452 Rhodopirellula baltica SH 1 1793960 NP_870846.1 CDS tadB NC_005027.1 7017449 7018342 D PMID: 11029439 best DB hits: BLAST: gb:AAF40196.1; AF229646_8 (AF229646) TadB [Caulobacter crescentus]; E=0.005 gb:AAD38173.2; AF152598_2 (AF152598) TadB [Actinobacillus; E=0.41; protein secretion system or pilus assembly related protein TadB 7017449..7018342 Rhodopirellula baltica SH 1 1793594 NP_870847.1 CDS RB13077 NC_005027.1 7018654 7019574 D PMID: 8843436 best DB hits: BLAST: embl:CAB92604.1; (AL356813) integral membrane protein; E=0.002; hypothetical protein 7018654..7019574 Rhodopirellula baltica SH 1 1792387 NP_870848.1 CDS RB13078 NC_005027.1 7019481 7019936 D PMID: 11298281 best DB hits: BLAST: gb:AAF81067.1; AF223364_2 (AF223364) unknown [Myxococcus xanthus]; E=8e-12 embl:CAB92612.1; (AL356813) secreted protein; E=6e-05 swissprot:Q9UZM5; Y743_PYRAB HYPOTHETICAL PROTEIN PAB0743 -----; E=0.006 COG: PAB0743; COG1430 Uncharacterized ACR; E=6e-04 PFAM: PF02643; Uncharacterized ACR, COG1430; E=4.1e-08; hypothetical protein 7019481..7019936 Rhodopirellula baltica SH 1 1790371 NP_870849.1 CDS RB13080 NC_005027.1 7019948 7020655 D PMID: 8688087 best DB hits: BLAST: swissprot:Q58492; YA92_METJA HYPOTHETICAL PROTEIN MJ1092 -----; E=5e-07 swissprot:P76425; YOHM_ECOLI HYPOTHETICAL 30.4 KDA PROTEIN IN; E=0.003 gb:AAG57167.1; AE005437_2 (AE005437) orf, hypothetical protein; E=0.019 COG: MJ1092; COG2215 Predicted membrane protein; E=5e-08; hypothetical protein 7019948..7020655 Rhodopirellula baltica SH 1 1792931 NP_870850.1 CDS RB13082 NC_005027.1 7020677 7020898 D hypothetical protein 7020677..7020898 Rhodopirellula baltica SH 1 1793758 NP_870851.1 CDS RB13084 NC_005027.1 7020834 7021373 D PMID: 9537320 best DB hits: BLAST: pir:B70403; hypothetical protein aq_1194 - Aquifex aeolicus -----; E=3e-05 pir:G75360; conserved hypothetical protein - Deinococcus radiodurans; E=1e-04 pir:S74786; hypothetical protein slr1083 - Synechocystis sp. (strain; E=0.003; hypothetical protein 7020834..7021373 Rhodopirellula baltica SH 1 1795237 NP_870852.1 CDS RB13086 NC_005027.1 7021382 7021633 D hypothetical protein 7021382..7021633 Rhodopirellula baltica SH 1 1791959 NP_870853.1 CDS RB13088 NC_005027.1 7021677 7022309 R hypothetical protein complement(7021677..7022309) Rhodopirellula baltica SH 1 1790353 NP_870854.1 CDS RB13089 NC_005027.1 7022309 7022530 R hypothetical protein complement(7022309..7022530) Rhodopirellula baltica SH 1 1790255 NP_870855.1 CDS RB13090 NC_005027.1 7022518 7023642 R PMID: 8843436 best DB hits: BLAST: embl:CAB71851.1; (AL138667) monooxygenase. [Streptomyces; E=0.003 gb:AAB53030.1; (U62055) TrkA [Bacillus subtilis]; E=0.023 pir:E69725; potassium uptake trkA - Bacillus subtilis -----; E=0.023 COG: BS_trkA; COG2072 Predicted flavoprotein involved in K+ transport; E=0.002 PFAM: PF01134; Glucose inhibited division prot; E=0.5 PF02254; KTN NAD-binding domain; E=0.066 PF02032; Phytoene dehydrogenase related; E=0.88; monooxygenase complement(7022518..7023642) Rhodopirellula baltica SH 1 1790383 NP_870856.1 CDS RB13091 NC_005027.1 7023639 7024934 R PMID: 1655697 best DB hits: BLAST: pir:D82953; conserved hypothetical protein PA5535 [imported] -; E=1e-109 embl:CAC08207.1; (AJ278349) P44k protein [Rhodococcus sp. AJ270]; E=1e-101 pir:B69760; conserved hypothetical protein yciC - Bacillus subtilis; E=1e-98 COG: PA5535; COG0523 GTPases (G3E family); E=1e-110 PFAM: PF01443; Viral (Superfamily 1) RNA hel; E=0.08 PF01495; HypB/UreG nucleotide-binding; E=0.026 PF02492; Cobalamin synthesis protein/P; E=9.1e-107; cobalamin synthesis protein CobW complement(7023639..7024934) Rhodopirellula baltica SH 1 1792120 NP_870857.1 CDS RB13092 NC_005027.1 7025003 7025143 D hypothetical protein 7025003..7025143 Rhodopirellula baltica SH 1 1792678 NP_870858.1 CDS RB13093 NC_005027.1 7025101 7025577 R signal peptide complement(7025101..7025577) Rhodopirellula baltica SH 1 1792271 NP_870859.1 CDS RB13094 NC_005027.1 7025749 7026762 D PMID: 1655697 best DB hits: BLAST: swissprot:P33030; YEIR_ECOLI HYPOTHETICAL 36.1 KD PROTEIN IN; E=1e-47 gb:AAG57311.1; AE005450_1 (AE005450) orf, hypothetical protein; E=8e-47 ddbj:BAA15982.1; (D90849) ORF_ID:o369#5; similar to [SwissProt; E=1e-44 COG: yeiR; COG0523 GTPases (G3E family); E=1e-48 PFAM: PF01443; Viral (Superfamily 1) RNA hel; E=0.025 PF02492; Cobalamin synthesis protein/P; E=2.3e-13; cobalamin synthesis protein CobW 7025749..7026762 Rhodopirellula baltica SH 1 1793976 NP_870860.1 CDS RB13095 NC_005027.1 7026753 7027442 D hypothetical protein 7026753..7027442 Rhodopirellula baltica SH 1 1790864 NP_870861.1 CDS RB13097 NC_005027.1 7026795 7027310 R signal peptide complement(7026795..7027310) Rhodopirellula baltica SH 1 1790671 NP_870862.1 CDS RB13098 NC_005027.1 7027443 7027733 R hypothetical protein complement(7027443..7027733) Rhodopirellula baltica SH 1 1795150 NP_870863.1 CDS fur NC_005027.1 7027807 7028238 D PMID: 7798143 PMID: 2993806 PMID: 2823881 best DB hits: BLAST: swissprot:Q45765; FUR_BORPE FERRIC UPTAKE REGULATION PROTEIN; E=3e-05 swissprot:P06975; FUR_ECOLI FERRIC UPTAKE REGULATION PROTEIN; E=2e-04 gb:AAD01582.1; (AF016035) ferric uptake regulation protein; E=2e-04 COG: fur; COG0735 Fe2+/Zn2+ uptake regulation proteins; E=2e-05 PFAM: PF00403; Heavy-metal-associated domain; E=0.18 PF01475; Ferric uptake regulator family; E=7.4e-05; ferric uptake regulation protein Fur 7027807..7028238 Rhodopirellula baltica SH 1 1790159 NP_870864.1 CDS RB13102 NC_005027.1 7028321 7028581 R signal peptide complement(7028321..7028581) Rhodopirellula baltica SH 1 1790005 NP_870865.1 CDS RB13104 NC_005027.1 7028712 7030826 D PMID: 8326859 best DB hits: BLAST: gb:AAG60826.1; AF322012_131 (AF322013) RhcC2 [Bradyrhizobium; E=2e-29 swissprot:P55702; Y4XJ_RHISN HYPOTHETICAL 44.3 KD PROTEIN Y4XJ; E=5e-29 pir:G83108; probable type II secretion system protein PA4304; E=2e-21 COG: PA4304; COG1450 General secretory pathway protein D; E=2e-22 PFAM: PF00263; Bacterial type II and III secretion; E=5.2e-06; type II secretion system protein 7028712..7030826 Rhodopirellula baltica SH 1 1791318 NP_870866.1 CDS RB13106 NC_005027.1 7030816 7031394 D signal peptide 7030816..7031394 Rhodopirellula baltica SH 1 1791386 NP_870867.1 CDS pilF NC_005027.1 7031391 7032119 D PMID: 97128806 best DB hits: BLAST: gb:AAA62535.1; (U21320) contains TPR domain-like repeats; E=2e-04 gb:AAB63465.1; (U77412) O-linked GlcNAc transferase; E=2e-04 pir:H83171; type 4 fimbrial biogenesis protein PilF PA3805; E=4e-04 COG: PA3805; COG0457 TPR-repeat-containing proteins; E=4e-05; type IV fimbrial biogenesis protein PilF 7031391..7032119 Rhodopirellula baltica SH 1 1794272 NP_870868.1 CDS RB13109 NC_005027.1 7032215 7032463 R hypothetical protein complement(7032215..7032463) Rhodopirellula baltica SH 1 1793160 NP_870869.1 CDS apaH NC_005027.1 7032486 7033415 D PMID: 3031429 best DB hits: BLAST: pir:C83259; hypothetical protein PA3087 [imported] - Pseudomonas; E=1e-54 ddbj:BAB06564.1; (AP001516) diadenosine tetraphosphatase; E=8e-10 embl:CAA11911.1; (AJ224354) protein serine-threonine phosphatase,; E=6e-08 COG: PA3087; COG0639 Diadenosine tetraphosphatase and related; E=1e-55; diadenosine tetraphosphatase 7032486..7033415 Rhodopirellula baltica SH 1 1793097 NP_870870.1 CDS nudH NC_005027.1 7033419 7033949 D PMID: 11479323 best DB hits: BLAST: swissprot:Q46930; NUDH_ECOLI PROBABLE (DI)NUCLEOSIDE POLYPHOSPHATE; E=0.16; (di)nucleoside polyphosphate hydrolase 7033419..7033949 Rhodopirellula baltica SH 1 1793767 NP_870871.1 CDS RB13112 NC_005027.1 7034035 7036128 R PMID: 7984107 best DB hits: BLAST: pir:S75136; sensory transduction histidine kinase slr2104 -; E=1e-69 pir:S75130; sensory transduction histidine kinase slr2098 -; E=4e-57 pir:C82424; sensor histidine kinase LuxQ VCA0736 [imported] - Vibrio; E=8e-56 COG: VC1349_2; COG0642 Sensory transduction histidine kinases; E=8e-57 PFAM: PF00785; PAC motif; E=0.34 PF00512; His Kinase A (phosphoacceptor) d; E=8.1e-23 PF02518; Histidine kinase-, DNA gyrase B-; E=3.6e-41; sensory transduction histidine kinase complement(7034035..7036128) Rhodopirellula baltica SH 1 1794088 NP_870872.1 CDS RB13114 NC_005027.1 7036271 7036468 R hypothetical protein complement(7036271..7036468) Rhodopirellula baltica SH 1 1793869 NP_870873.1 CDS RB13115 NC_005027.1 7036369 7036614 R hypothetical protein complement(7036369..7036614) Rhodopirellula baltica SH 1 1791166 NP_870874.1 CDS RB13116 NC_005027.1 7036394 7036561 D hypothetical protein 7036394..7036561 Rhodopirellula baltica SH 1 1793798 NP_870875.1 CDS RB13117 NC_005027.1 7036595 7037065 D best DB hits: BLAST: ddbj:BAB10342.1; (AB016872) contains similarity to two-component; E=0.63; hypothetical protein 7036595..7037065 Rhodopirellula baltica SH 1 1792092 NP_870876.1 CDS ntrC NC_005027.1 7037043 7037675 D PMID: 2882477 best DB hits: BLAST: pir:H70558; hypothetical protein Rv1626 - Mycobacterium tuberculosis; E=3e-16 pir:T35758; probable response regulator - Streptomyces coelicolor; E=4e-15 pir:S52249; response regulator nasT - Azotobacter vinelandii -----; E=1e-12 COG: Rv1626; COG0784 CheY-like receiver domains; E=2e-17 glnG; COG2204 AAA superfamily ATPases with N-terminal receiver; E=3e-06 MTH447_1; COG0784 CheY-like receiver domains; E=2e-04 PFAM: PF00072; Response regulator receiver doma; E=0.0018; nitrogen regulation protein 7037043..7037675 Rhodopirellula baltica SH 1 1790677 NP_870877.1 CDS RB13120 NC_005027.1 7037744 7038451 R hypothetical protein complement(7037744..7038451) Rhodopirellula baltica SH 1 1790451 NP_870878.1 CDS RB13122 NC_005027.1 7038440 7038598 D hypothetical protein 7038440..7038598 Rhodopirellula baltica SH 1 1794543 NP_870879.1 CDS RB13124 NC_005027.1 7038708 7040645 R signal peptide complement(7038708..7040645) Rhodopirellula baltica SH 1 1792892 NP_870880.1 CDS RB13126 NC_005027.1 7040642 7042150 R hypothetical protein complement(7040642..7042150) Rhodopirellula baltica SH 1 1793241 NP_870881.1 CDS RB13127 NC_005027.1 7040747 7041253 D hypothetical protein 7040747..7041253 Rhodopirellula baltica SH 1 1792582 NP_870882.1 CDS RB13128 NC_005027.1 7041425 7041940 D hypothetical protein 7041425..7041940 Rhodopirellula baltica SH 1 1789978 NP_870883.1 CDS RB13129 NC_005027.1 7042044 7042292 D hypothetical protein 7042044..7042292 Rhodopirellula baltica SH 1 1790146 NP_870884.1 CDS RB13131 NC_005027.1 7042434 7044236 D PMID: 9389475 best DB hits: BLAST: gb:AAB89309.1; (AE000969) cysteine proteinase, ; E=0.30 PFAM: PF01839; FG-GAP repeat; E=0.31; cysteine proteinase 7042434..7044236 Rhodopirellula baltica SH 1 1795380 NP_870885.1 CDS RB13132 NC_005027.1 7044398 7045837 R hypothetical protein complement(7044398..7045837) Rhodopirellula baltica SH 1 1793150 NP_870886.1 CDS RB13137 NC_005027.1 7045937 7048405 R hypothetical protein complement(7045937..7048405) Rhodopirellula baltica SH 1 1792723 NP_870887.1 CDS xylR NC_005027.1 7048625 7049875 R PMID: 8041620 best DB hits: BLAST: swissprot:P45043; XYLR_HAEIN XYLOSE OPERON REGULATORY PROTEIN; E=3e-40 swissprot:P37390; XYLR_ECOLI XYLOSE OPERON REGULATORY PROTEIN; E=4e-39 ddbj:BAB03212.1; (AB046360) xylose operon regulatory; E=1e-34 COG: HI1106_1; COG1609 Transcriptional regulators; E=4e-22 HI1106_2; COG2207 AraC-type DNA-binding domain-containing proteins; E=8e-12 PFAM: PF00165; Bacterial regulatory helix-turn-heli; E=2.8e-25; xylose operon regulatory protein complement(7048625..7049875) Rhodopirellula baltica SH 1 1791192 NP_870888.1 CDS mmsB NC_005027.1 7049908 7050891 D PMID: 1339433 best DB hits: BLAST: swissprot:P44979; YGBJ_HAEIN HYPOTHETICAL PROTEIN HI1010 -----; E=3e-48 gb:AAK03450.1; (AE006174) unknown [Pasteurella multocida]; E=8e-47 gb:AAF25989.1; AC013354_8 (AC013354) F15H18.21 [Arabidopsis; E=6e-46 COG: HI1010; COG2084 3-hydroxyisobutyrate dehydrogenase and related; E=3e-49 PFAM: PF01089; Delta 1-pyrroline-5-carboxylate; E=0.035 PF02737; 3-hydroxyacyl-CoA dehydrogenase,; E=0.00065 PF02254; KTN NAD-binding domain; E=8.4e-05; 3-hydroxyisobutyrate dehydrogenase 7049908..7050891 Rhodopirellula baltica SH 1 1792995 NP_870889.1 CDS RB13142 NC_005027.1 7050849 7051226 R hypothetical protein complement(7050849..7051226) Rhodopirellula baltica SH 1 1796963 NP_870890.1 CDS RB13143 NC_005027.1 7051238 7052500 R hypothetical protein complement(7051238..7052500) Rhodopirellula baltica SH 1 1796983 NP_870891.1 CDS RB13146 NC_005027.1 7052481 7053470 R PMID: 8843436 best DB hits: BLAST: embl:CAB61805.1; (AL133236) hypothetical protein SCE65.17c; E=5e-41 ddbj:BAB05597.1; (AP001513) BH1878~unknown conserved protein; E=0.003 gb:AAB97967.1; (AF040720) xylosidasearabinosidase [Selenomonas; E=0.010; xylosidase/arabinosidase complement(7052481..7053470) Rhodopirellula baltica SH 1 1796964 NP_870892.1 CDS RB13147 NC_005027.1 7053522 7054958 R PMID: 7910580 best DB hits: BLAST: embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=7e-62 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=7e-62 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=3e-61 COG: aslA; COG3119 Arylsulfatase A and related enzymes; E=5e-31 PFAM: PF00884; Sulfatase; E=1.2e-107; arylsulphatase A complement(7053522..7054958) Rhodopirellula baltica SH 1 1796758 NP_870893.1 CDS RB13148 NC_005027.1 7054968 7058006 R best DB hits: BLAST: embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=1e-60 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=1e-60 pdb:1E2S; P Chain P, Crystal Structure Of An Arylsulfatase A; E=1e-59 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=8e-31 PFAM: PF00814; Glycoprotease; E=0.2 PF00884; Sulfatase; E=1.6e-93 PF00884; Sulfatase; E=4.5e-52; iduronate-sulfatase or arylsulfatase A complement(7054968..7058006) Rhodopirellula baltica SH 1 1796178 NP_870894.1 CDS RB13150 NC_005027.1 7058003 7059586 R PMID: 8662838 best DB hits: BLAST: gb:AAB07813.1; (U40408) sialic-acid O-acetylesterase [Mus; E=2e-19 embl:CAA67214.1; (X98625) sialic acid-specific 9-O-acetylesterase; E=7e-19 gb:AAD55976.1; (AF156856) cytosolic sialic acid; E=9e-15; sialic-acid O-acetylesterase complement(7058003..7059586) Rhodopirellula baltica SH 1 1796179 NP_870895.1 CDS RB13154 NC_005027.1 7059549 7060442 R PMID: 10567266 best DB hits: BLAST: pir:B75555; probable lipaseesterase - Deinococcus radiodurans; E=8e-04 pir:T51415; Carboxylesterase-like protein - Arabidopsis thaliana; E=0.071 gb:AAF32448.1; (AC021640) hypothetical protein [Arabidopsis; E=0.17 PFAM: PF01738; Dienelactone hydrolase; E=3.9e-07; lipase/esterase complement(7059549..7060442) Rhodopirellula baltica SH 1 1796216 NP_870896.1 CDS RB13155 NC_005027.1 7060505 7062007 R PMID: 8020961 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=2e-49 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=4e-49 pir:S07089; arylsulfatase (EC 3.1.6.1) - sea urchin (Lytechinus; E=5e-42 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=7e-33 PFAM: PF00884; Sulfatase; E=6.3e-54; N-acetylgalactosamine 6-sulfate sulfatase (GALNS) complement(7060505..7062007) Rhodopirellula baltica SH 1 1796233 NP_870897.1 CDS RB13156 NC_005027.1 7061904 7063085 R PMID: 10567266 best DB hits: BLAST: pir:H70731; probable esterase - Mycobacterium tuberculosis (strain; E=4e-10 embl:CAA04934.1; (AJ001695) esterase [Thermotoga maritima]; E=2e-09 pir:F72287; esterase - Thermotoga maritima (strain MSB8) -----; E=2e-09 COG: Rv2284; COG0657 Acetyl esterase; E=4e-11 slr0825; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; E=8e-08 DR0821_2; COG0657 Acetyl esterase; E=6e-07 PFAM: PF00036; EF hand; E=0.59; lipase/esterase complement(7061904..7063085) Rhodopirellula baltica SH 1 1795313 NP_870898.1 CDS RB13157 NC_005027.1 7063121 7064665 R PMID: 9710560 PMID: 10809675 best DB hits: BLAST: gb:AAF72520.1; AF248951_1 (AF248951) mucin-desulfating sulfatase; E=6e-35 gb:AAF55296.1; (AE003712) Sulf1 gene product [Drosophila; E=2e-28 pir:T16584; hypothetical protein K09C4.8 - Caenorhabditis elegans; E=3e-24 COG: yidJ; COG3119 Arylsulfatase A and related enzymes; E=1e-24 BS_yqgS; COG1368 Phosphoglycerol transferase and related proteins,; E=0.007 PFAM: PF02455; Hexon-associated protein (IIIa); E=0.25 PF00884; Sulfatase; E=8e-47; mucin-desulfating sulfatase complement(7063121..7064665) Rhodopirellula baltica SH 1 1793182 NP_870899.1 CDS RB13162 NC_005027.1 7064662 7067217 R PMID: 8843436 best DB hits: BLAST: embl:CAB56147.1; (AL117669) hypothetical protein [Streptomyces; E=7e-12 embl:CAB55704.1; (AL117387) secreted protein; E=4e-09 embl:CAB94651.1; (AL359215) polysaccharide lyase.; E=1e-04; thiol (cysteine) protease complement(7064662..7067217) Rhodopirellula baltica SH 1 1796249 NP_870900.1 CDS xylR NC_005027.1 7067089 7068300 D PMID: 8041620 best DB hits: BLAST: swissprot:P45043; XYLR_HAEIN XYLOSE OPERON REGULATORY PROTEIN; E=5e-38 swissprot:P37390; XYLR_ECOLI XYLOSE OPERON REGULATORY PROTEIN; E=8e-38 ddbj:BAB03212.1; (AB046360) xylose operon regulatory; E=2e-28 COG: HI1106_1; COG1609 Transcriptional regulators; E=1e-23 xylR_2; COG2207 AraC-type DNA-binding domain-containing proteins; E=4e-12 BH3692; COG1609 Transcriptional regulators; E=2e-05 PFAM: PF00165; Bacterial regulatory helix-turn-hel; E=3.1e-16; xylose operon regulatory protein 7067089..7068300 Rhodopirellula baltica SH 1 1796276 NP_870901.1 CDS RB13168 NC_005027.1 7068345 7068590 D signal peptide 7068345..7068590 Rhodopirellula baltica SH 1 1796311 NP_870902.1 CDS RB13170 NC_005027.1 7068587 7069753 R hypothetical protein complement(7068587..7069753) Rhodopirellula baltica SH 1 1796266 NP_870903.1 CDS RB13171 NC_005027.1 7069775 7069906 R hypothetical protein complement(7069775..7069906) Rhodopirellula baltica SH 1 1796113 NP_870904.1 CDS RB13172 NC_005027.1 7069962 7070198 R hypothetical protein complement(7069962..7070198) Rhodopirellula baltica SH 1 1795835 NP_870905.1 CDS RB13173 NC_005027.1 7070226 7070609 D hypothetical protein 7070226..7070609 Rhodopirellula baltica SH 1 1796756 NP_870906.1 CDS RB13175 NC_005027.1 7070719 7074087 D PMID: 2201868 best DB hits: BLAST: pir:S75136; sensory transduction histidine kinase slr2104 -; E=2e-67 pir:S75142; sensory transduction histidine kinase slr1759 -; E=2e-55 embl:CAA65047.1; (X95731) sensor kinase [Synechocystis; E=3e-55 COG: VC1349_2; COG0642 Sensory transduction histidine kinases; E=1e-50 PFAM: PF00989; PAS domain; E=0.011 PF00785; PAC motif; E=0.075 PF00989; PAS domain; E=0.46; sensory transduction histidine kinase 7070719..7074087 Rhodopirellula baltica SH 1 1796102 NP_870907.1 CDS RB13180 NC_005027.1 7074068 7075603 D PMID: 8905231 best DB hits: BLAST: pir:S76478; hypothetical protein - Synechocystis sp. (strain PCC; E=3e-41 pir:T44269; hypothetical protein KaiC [imported] - Synechococcus sp.; E=4e-39 pir:S76850; hypothetical protein - Synechocystis sp. (strain PCC; E=5e-35 COG: slr1942; COG0467 RecA-superfamily ATPases implicated in signal; E=3e-42 PFAM: PF00004; ATPase associated with; E=0.17 PF02223; Thymidylate kinase; E=0.11 PF00004; ATPase associated with; E=0.25; hypothetical protein 7074068..7075603 Rhodopirellula baltica SH 1 1796782 NP_870908.1 CDS RB13181 NC_005027.1 7075603 7078464 D PMID: 2201868 best DB hits: BLAST: pir:S75136; sensory transduction histidine kinase slr2104 -; E=8e-57 pir:E82198; sensor histidine kinaseresponse regulator VC1445; E=4e-49 embl:CAA37397.1; (X53315) arcB [Escherichia coli]; E=3e-48 COG: sll1353_2; COG0642 Sensory transduction histidine kinases; E=7e-43 PFAM: PF00785; PAC motif; E=0.1 PF00989; PAS domain; E=8.8e-05 PF00785; PAC motif; E=9.8e-08; sensory transduction histidine kinase 7075603..7078464 Rhodopirellula baltica SH 1 1796773 NP_870909.1 CDS RB13183 NC_005027.1 7078476 7078718 D hypothetical protein 7078476..7078718 Rhodopirellula baltica SH 1 1796775 NP_870910.1 CDS dsbD NC_005027.1 7078691 7079314 R PMID: 7623667 best DB hits: BLAST: pir:E83039; thiol:disulfide interchange protein DipZ PA4845; E=1e-06 pir:F81074; thiol-disulfide interchange protein dsbD homolog NMB1519; E=2e-05 pir:B81868; thiol-disulfide interchange protein dsbD homolog NMA1719; E=2e-05 COG: PA4845; COG0526 Thiol-disulfide isomerase and thioredoxins; E=1e-07 VNG1905C; COG1331 Highly conserved protein containing a thioredoxin; E=5e-06 MTH1745; COG0526 Thiol-disulfide isomerase and thioredoxins; E=6e-06 PFAM: PF00085; Thioredoxin; E=0.1; thiol:disulfide interchange protein complement(7078691..7079314) Rhodopirellula baltica SH 1 1796777 NP_870911.1 CDS RB13185 NC_005027.1 7079332 7079589 D hypothetical protein 7079332..7079589 Rhodopirellula baltica SH 1 1796780 NP_870912.1 CDS RB13186 NC_005027.1 7079642 7081960 R PMID: 11544236 best DB hits: BLAST: gb:AAK02042.1; AF261825_11 (AF261825) hypothetical protein; E=1e-119 swissprot:P55381; Y4BN_RHISN HYPOTHETICAL 47.6 KD PROTEIN Y4BN; E=0.011 swissprot:P28842; SUBT_BACS9 SUBTILISIN PRECURSOR ----- pir:; E=0.14; subtilisin proteinase-like protein complement(7079642..7081960) Rhodopirellula baltica SH 1 1796779 NP_870913.1 CDS RB13189 NC_005027.1 7081765 7083066 D PMID: 9043130 best DB hits: BLAST: gb:AAD45539.1; U70376_1 (U70376) InsA [Streptomyces netropsis]; E=5e-33 gb:AAG60893.1; AF322013_12 (AF322013) ID460 [Bradyrhizobium; E=8e-33 ddbj:BAA19966.1; (D63923) transposase [Acetobacter pasteurianus]; E=1e-26; transposase 7081765..7083066 Rhodopirellula baltica SH 1 1796769 NP_870914.1 CDS RB13190 NC_005027.1 7083077 7083229 D hypothetical protein 7083077..7083229 Rhodopirellula baltica SH 1 1796783 NP_870915.1 CDS RB13191 NC_005027.1 7083226 7083663 R hypothetical protein complement(7083226..7083663) Rhodopirellula baltica SH 1 1796781 NP_870916.1 CDS RB13193 NC_005027.1 7083676 7084662 R PMID: 9927482 best DB hits: BLAST: gb:AAK02043.1; AF261825_12 (AF261825) ATPase [Salmonella; E=1e-73 swissprot:P55530; Y4KL_RHISN HYPOTHETICAL 37.6 KD AAA-FAMILY; E=4e-40 gb:AAA64864.1; (U23723) orf300 [Escherichia coli]; E=2e-25 COG: AF0477; COG0464 ATPases of the AAA+ class; E=1e-22 AF1285; COG1223 Predicted ATPases of the AAA+ class; E=9e-20 HP1069; COG0465 ATP-dependent Zn proteases; E=8e-19 PFAM: PF00406; Adenylate kinase; E=0.57 PF00071; Ras family; E=0.09 PF01202; Shikimate kinase; E=0.028; ATPase AAA complement(7083676..7084662) Rhodopirellula baltica SH 1 1793667 NP_870917.1 CDS RB13194 NC_005027.1 7084723 7084920 D hypothetical protein 7084723..7084920 Rhodopirellula baltica SH 1 1796770 NP_870918.1 CDS RB13198 NC_005027.1 7084995 7085369 D hypothetical protein 7084995..7085369 Rhodopirellula baltica SH 1 1791767 NP_870919.1 CDS RB13201 NC_005027.1 7085419 7085784 R hypothetical protein complement(7085419..7085784) Rhodopirellula baltica SH 1 1793991 NP_870920.1 CDS RB13202 NC_005027.1 7086052 7086189 R hypothetical protein complement(7086052..7086189) Rhodopirellula baltica SH 1 1794760 NP_870921.1 CDS RB13205 NC_005027.1 7086337 7086564 R hypothetical protein complement(7086337..7086564) Rhodopirellula baltica SH 1 1792745 NP_870922.1 CDS RB13207 NC_005027.1 7086585 7086761 R signal peptide complement(7086585..7086761) Rhodopirellula baltica SH 1 1790721 NP_870923.1 CDS RB13209 NC_005027.1 7087064 7087501 R best DB hits: BLAST: swissprot:P29939; YCB6_PSEDE HYPOTHETICAL 15.0 KD PROTEIN IN COBO; E=4e-15 pir:H81035; conserved hypothetical protein NMB1840 [imported] -; E=7e-14 pir:D81981; probable integral membrane protein NMA0616 [imported] -; E=2e-13 COG: NMB1840; COG2510 Predicted membrane protein; E=7e-15 PFAM: PF00892; Integral membrane protein DUF6; E=5.4e-17; transmembrane protein- transporter complement(7087064..7087501) Rhodopirellula baltica SH 1 1793613 NP_870924.1 CDS RB13210 NC_005027.1 7087573 7087710 R hypothetical protein complement(7087573..7087710) Rhodopirellula baltica SH 1 1792646 NP_870925.1 CDS RB13211 NC_005027.1 7087707 7090199 R best DB hits: BLAST: pir:S77201; hypothetical protein slr1820 - Synechocystis sp. (strain; E=7e-27 gb:AAG57388.1; AE005458_5 (AE005458) orf, hypothetical protein; E=3e-26 pir:G64996; hypothetical protein b2257 - Escherichia coli (strain; E=3e-26 COG: slr1820; COG1807 Uncharacterized protein, affecting LPS biosynthesis; E=7e-28 aq_1899; COG0463 Glycosyltransferases involved in cell wall; E=8e-27 PA3556; COG1807 Uncharacterized protein, affecting LPS biosynthesis; E=1e-22 PFAM: PF00535; Glycosyl transferase; E=7.2e-32 PF02366; Dolichyl-phosphate-mannose-pr; E=1e-13; dolichol-phosphate mannosyltransferase- membrane bound sugar transferase involved in LPS biosynthesis complement(7087707..7090199) Rhodopirellula baltica SH 1 1795281 NP_870926.1 CDS RB13214 NC_005027.1 7090176 7090286 D hypothetical protein 7090176..7090286 Rhodopirellula baltica SH 1 1794066 NP_870927.1 CDS RB13215 NC_005027.1 7090395 7091498 R hypothetical protein complement(7090395..7091498) Rhodopirellula baltica SH 1 1791178 NP_870928.1 CDS RB13217 NC_005027.1 7091498 7091881 R PMID: 1444307 best DB hits: BLAST: embl:CAC16667.1; (AJ302698) beta-lactamase repressor; E=2e-06 swissprot:P18415; BLAI_STAAU PENICILLINASE REPRESSOR (REGULATORY; E=7e-06 swissprot:P06555; BLAI_BACLI PENICILLINASE REPRESSOR (REGULATORY; E=8e-06; beta-lactamase repressor complement(7091498..7091881) Rhodopirellula baltica SH 1 1791182 NP_870929.1 CDS RB13220 NC_005027.1 7091973 7092785 R signal peptide complement(7091973..7092785) Rhodopirellula baltica SH 1 1790797 NP_870930.1 CDS RB13221 NC_005027.1 7093018 7093986 D best DB hits: PFAM: PF01569; PAP2 superfamily; E=0.00049; signal peptide 7093018..7093986 Rhodopirellula baltica SH 1 1792255 NP_870931.1 CDS RB13222 NC_005027.1 7094088 7094714 R best DB hits: BLAST: pir:B69020; hypothetical protein MTH115 - Methanobacterium; E=8e-16 ddbj:BAA96146.1; (AP002092) ESTs; E=4e-10 gb:AAD32774.1; AC007661_11 (AC007661) unknown protein [Arabidopsis; E=9e-09; hypothetical protein complement(7094088..7094714) Rhodopirellula baltica SH 1 1793183 NP_870932.1 CDS RB13224 NC_005027.1 7094813 7096270 R best DB hits: BLAST: pir:T36454; probable oxidoreductase - Streptomyces coelicolor; E=1e-110 pir:T51117; hypothetical protein [imported] - Brevibacterium linens; E=4e-66 gb:AAG55251.1; AE005268_4 (AE005268) dTDP-glucose enzyme; E=2e-55 COG: VC1632; COG0702 Predicted nucleoside-diphosphate-sugar epimerases; E=2e-56 PH0378; COG0451 Nucleoside-diphosphate-sugar epimerases; E=4e-05 slr0317; COG0702 Predicted nucleoside-diphosphate-sugar epimerases; E=8e-05 PFAM: PF02716; Isoflavone reductase; E=0.16 PF01118; Semialdehyde dehydrogenase, N; E=0.012 PF01370; NAD dependent epimerase/dehyd; E=0.043; oxidoreductase- NAD-dependent nucleoside-diphosphate-sugar epimerase complement(7094813..7096270) Rhodopirellula baltica SH 1 1793184 NP_870933.1 CDS recQ NC_005027.1 7096300 7097982 D PMID: 3027506 PMID: 2164680 best DB hits: BLAST: pir:E82351; ATP-dependent DNA helicase RecQ VC0196 [imported] -; E=1e-68 swissprot:P50729; RECQ_BACSU ATP-DEPENDENT DNA HELICASE RECQ; E=4e-65 gb:AAA24517.1; (M30198) recQ [Escherichia coli]; E=7e-65 COG: VC0196; COG0514 Superfamily II DNA helicase; E=1e-69 YNL112w; COG0513 Superfamily II DNA and RNA helicases; E=3e-13 PFAM: PF00270; DEAD/DEAH box helicase; E=1.2e-39 PF00271; Helicase conserved C-terminal doma; E=2e-23; ATP-dependent DNA helicase RecQ 7096300..7097982 Rhodopirellula baltica SH 1 1792465 NP_870934.1 CDS RB13228 NC_005027.1 7097952 7098302 D hypothetical protein 7097952..7098302 Rhodopirellula baltica SH 1 1792590 NP_870935.1 CDS RB13230 NC_005027.1 7098284 7098475 D hypothetical protein 7098284..7098475 Rhodopirellula baltica SH 1 1790354 NP_870936.1 CDS RB13231 NC_005027.1 7098472 7099530 D best DB hits: BLAST: embl:CAA72209.1; (Y11405) replicase-associated protein; E=0.65 embl:CAB44020.1; (AJ132180) Rep protein [faba bean necrotic; E=0.65 ddbj:BAA97561.1; (AB027511) replication initiator protein [milk; E=0.79; hypothetical protein 7098472..7099530 Rhodopirellula baltica SH 1 1790436 NP_870937.1 CDS RB13234 NC_005027.1 7099626 7099841 R hypothetical protein complement(7099626..7099841) Rhodopirellula baltica SH 1 1792295 NP_870938.1 CDS RB13235 NC_005027.1 7099815 7100237 D hypothetical protein 7099815..7100237 Rhodopirellula baltica SH 1 1795394 NP_870939.1 CDS RB13237 NC_005027.1 7100241 7101407 D best DB hits: BLAST: pir:E82493; conserved hypothetical protein VCA0172 [imported] -; E=3e-04 pir:B83262; hypothetical protein PA3073 [imported] - Pseudomonas; E=0.003 pir:T32949; hypothetical protein C05G6.3 - Caenorhabditis elegans; E=0.51 COG: VCA0172; COG3035 Uncharacterized BCR; E=3e-05 PFAM: PF00092; von Willebrand factor type A domain; E=2.6e-08; hypothetical protein 7100241..7101407 Rhodopirellula baltica SH 1 1795347 NP_870940.1 CDS RB13238 NC_005027.1 7101410 7101904 D PMID: 9573173; hypothetical protein 7101410..7101904 Rhodopirellula baltica SH 1 1793768 NP_870941.1 CDS RB13239 NC_005027.1 7101981 7102571 R hypothetical protein complement(7101981..7102571) Rhodopirellula baltica SH 1 1793705 NP_870942.1 CDS RB13241 NC_005027.1 7102561 7103064 R best DB hits: BLAST: embl:CAC01348.1; (AL390975) ECF-subfamily sigma factor; E=2e-06 pir:H70507; probable sigE protein - Mycobacterium tuberculosis; E=7e-06 gb:AAC45221.1; (U87307) extracytoplasmic function alternative; E=7e-06 COG: Rv1221; COG1595 DNA-directed RNA polymerase specialized sigma; E=7e-07 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=1e-09; ECF family RNA polymerase sigma factor complement(7102561..7103064) Rhodopirellula baltica SH 1 1792771 NP_870943.1 CDS RB13244 NC_005027.1 7103061 7103330 R hypothetical protein complement(7103061..7103330) Rhodopirellula baltica SH 1 1792887 NP_870944.1 CDS RB13245 NC_005027.1 7103413 7103583 R hypothetical protein complement(7103413..7103583) Rhodopirellula baltica SH 1 1794211 NP_870945.1 CDS RB13247 NC_005027.1 7103620 7104177 R hypothetical protein complement(7103620..7104177) Rhodopirellula baltica SH 1 1793672 NP_870946.1 CDS RB13250 NC_005027.1 7104107 7104463 R hypothetical protein complement(7104107..7104463) Rhodopirellula baltica SH 1 1790118 NP_870947.1 CDS RB13251 NC_005027.1 7104552 7104746 D hypothetical protein 7104552..7104746 Rhodopirellula baltica SH 1 1791712 NP_870948.1 CDS RB13253 NC_005027.1 7104865 7105479 D best DB hits: BLAST: embl:CAB69777.1; (AL137187) tetR-family transcriptional; E=3e-10 gb:AAD54003.1; AF088856_2 (AF088856) hypothetical protein; E=3e-07 embl:CAB95981.1; (AL360034) tetR-family regulatory; E=4e-07 COG: PA2931; COG1309 Transcriptional regulator; E=1e-05 PFAM: PF00440; Bacterial regulatory proteins, tetR; E=0.63; TetR family transcriptional regulator 7104865..7105479 Rhodopirellula baltica SH 1 1792547 NP_870949.1 CDS RB13257 NC_005027.1 7105590 7106450 D best DB hits: BLAST: embl:CAB59583.1; (AL132662) possible oxidoreductase [Streptomyces; E=3e-23 swissprot:Q50600; YJ33_MYCTU HYPOTHETICAL 32.2 KDA PROTEIN RV1833C; E=1e-22 gb:AAD02150.1; (AF039534) hydroxymuconic semialdehyde hydrolase; E=2e-19 COG: Rv1833c; COG0596 Predicted hydrolases or acyltransferases; E=1e-23 BH2279; COG0596 Predicted hydrolases or acyltransferases (alpha/beta; E=1e-18 BS_yugF; COG0596 Predicted hydrolases or acyltransferases; E=2e-18 PFAM: PF00561; alpha/beta hydrolase fold; E=4.1e-35; oxidoreductase- hydrolase involved in aromatic ring cleavage 7105590..7106450 Rhodopirellula baltica SH 1 1793333 NP_870950.1 CDS RB13259 NC_005027.1 7106461 7108365 R best DB hits: BLAST: pir:A72314; hypothetical protein TM0950 - Thermotoga maritima; E=3e-16; hypothetical protein complement(7106461..7108365) Rhodopirellula baltica SH 1 1794940 NP_870951.1 CDS yhdH NC_005027.1 7108384 7109364 D best DB hits: BLAST: swissprot:P26646; YHDH_ECOLI PROTEIN YHDH ----- pir: JS0688; E=4e-86 gb:AAG58380.1; AE005553_2 (AE005553) dehydrogenase; E=5e-86 pir:D82374; zinc-binding alcohol dehydrogenase VC0026 [imported] -; E=1e-76 COG: yhdH; COG0604 NADPH:quinone reductase and related Zn-dependent; E=4e-87 BH0538; COG1064 Zn-dependent alcohol dehydrogenases; E=0.001 PA0863; COG0604 NADPH:quinone reductase and related Zn-dependent; E=0.003 PFAM: PF00107; Zinc-binding dehydrogenases; E=2.3e-38; zinc-binding alcohol dehydrogenase 7108384..7109364 Rhodopirellula baltica SH 1 1792769 NP_870952.1 CDS RB13261 NC_005027.1 7109512 7110501 R PMID: 3015933 PMID: 2201777 best DB hits: BLAST: pir:E75366; glutamyl-tRNA synthetase-related protein - Deinococcus; E=2e-41 swissprot:O67271; SYE_AQUAE GLUTAMYL-TRNA SYNTHETASE; E=2e-39 gb:AAF49463.1; (AE003527) CG4573 gene product [Drosophila; E=2e-37 COG: DR1687; COG0008 Glutamyl- and glutaminyl-tRNA synthetases; E=2e-42 PFAM: PF00749; tRNA synthetases class I (E and; E=2.4e-11; glutamyl-tRNA synthetase-related protein complement(7109512..7110501) Rhodopirellula baltica SH 1 1794652 NP_870953.2 CDS asnC NC_005027.1 7110498 7111886 R catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase complement(7110498..7111886) Rhodopirellula baltica SH 1 1790442 NP_870954.1 CDS acs NC_005027.1 7112044 7114059 D PMID: 7751300 best DB hits: BLAST: swissprot:Q55404; ACSA_SYNY3 ACETYL-COENZYME A SYNTHETASE; E=0.0 pir:D75270; acetyl-CoA synthase - Deinococcus radiodurans (strain; E=0.0 swissprot:P27550; ACSA_ECOLI ACETYL-COENZYME A SYNTHETASE; E=0.0 COG: sll0542; COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid; E=0.0 DR2471; COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases; E=0.0 AF2389-N; COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid; E=1e-172 PFAM: PF00501; AMP-binding enzyme; E=3.1e-126; acetyl-coenzyme A synthetase 7112044..7114059 Rhodopirellula baltica SH 1 1792396 NP_870955.1 CDS pknB NC_005027.1 7114095 7116446 D best DB hits: BLAST: swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=3e-40 pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=9e-38 swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=2e-37 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=3e-41 PFAM: PF00069; Protein kinase domain; E=2e-47; serine/threonine-protein kinase pknB 7114095..7116446 Rhodopirellula baltica SH 1 1792388 NP_870956.1 CDS RB13267 NC_005027.1 7116578 7117297 R hypothetical protein complement(7116578..7117297) Rhodopirellula baltica SH 1 1793551 NP_870957.1 CDS ddlA NC_005027.1 7117533 7118558 R PMID: 8125347 best DB hits: BLAST: swissprot:P55650; Y4SG_RHISN HYPOTHETICAL 37.0 KD PROTEIN Y4SG; E=1e-17 swissprot:O66806; DDL_AQUAE D-ALANINE--D-ALANINE LIGASE; E=1e-10 swissprot:P44405; DDL_HAEIN D-ALANINE--D-ALANINE LIGASE; E=3e-10 COG: aq_521; COG1181 D-alanine-D-alanine ligase and related ATP-grasp; E=1e-11 PFAM: PF01820; D-ala D-ala ligase; E=7.8e-06; D-alanine-D-alanine ligase complement(7117533..7118558) Rhodopirellula baltica SH 1 1789921 NP_870958.1 CDS RB13273 NC_005027.1 7118616 7119677 R hypothetical protein complement(7118616..7119677) Rhodopirellula baltica SH 1 1795001 NP_870959.1 CDS RB13278 NC_005027.1 7119809 7120528 R hypothetical protein complement(7119809..7120528) Rhodopirellula baltica SH 1 1793619 NP_870960.1 CDS RB13281 NC_005027.1 7120587 7122128 R signal peptide complement(7120587..7122128) Rhodopirellula baltica SH 1 1794087 NP_870961.1 CDS RB13283 NC_005027.1 7122041 7122232 R hypothetical protein complement(7122041..7122232) Rhodopirellula baltica SH 1 1794995 NP_870962.1 CDS RB13286 NC_005027.1 7122359 7123975 D hypothetical protein 7122359..7123975 Rhodopirellula baltica SH 1 1792642 NP_870963.1 CDS RB13290 NC_005027.1 7123968 7124615 D hypothetical protein 7123968..7124615 Rhodopirellula baltica SH 1 1792713 NP_870964.1 CDS outD NC_005027.1 7124664 7127132 D PMID: 8326859 best DB hits: BLAST: pir:S32858; outD protein - Erwinia carotovora ----- embl:; E=2e-25 swissprot:P31701; GSPD_ERWCA GENERAL SECRETION PATHWAY PROTEIN D; E=2e-25 gb:AAA58785.1; (L33796) EpsD [Vibrio cholerae]; E=1e-22 COG: hofQ; COG1450 General secretory pathway protein D; E=4e-23 PFAM: PF00263; Bacterial type II and III secretion; E=1e-45; general secretion pathway protein D 7124664..7127132 Rhodopirellula baltica SH 1 1793750 NP_870965.1 CDS RB13294 NC_005027.1 7127129 7127677 D hypothetical protein 7127129..7127677 Rhodopirellula baltica SH 1 1795310 NP_870966.1 CDS RB13297 NC_005027.1 7128034 7128630 D signal peptide 7128034..7128630 Rhodopirellula baltica SH 1 1792763 NP_870967.1 CDS dur3 NC_005027.1 7128627 7130075 D PMID: 8335627 best DB hits: BLAST: gb:AAB65069.1; (U11582) No definition line found [Saccharomyces; E=6e-16 gb:AAA34582.1; (L19875) Dur3 [Saccharomyces cerevisiae]; E=1e-15 ddbj:BAB09166.1; (AB018113) urea active transporter-like protein; E=3e-11 COG: YHL016c; COG0591 Na+/proline, Na+/panthothenate symporters and; E=6e-17 PFAM: PF00474; Sodium:solute symporter family; E=1.4e-07; urea transporter or sodium transporter 7128627..7130075 Rhodopirellula baltica SH 1 1793171 NP_870968.1 CDS RB13300 NC_005027.1 7130061 7130249 R hypothetical protein complement(7130061..7130249) Rhodopirellula baltica SH 1 1792640 NP_870969.1 CDS pyrB NC_005027.1 7130204 7131286 D PMID: 6364131 PMID: 6302686 PMID: 6341995 PMID: 10318893 PMID: 2271529 best DB hits: BLAST: gb:AAB91125.1; (AE001099) aspartate carbamoyltransferase,; E=3e-31 swissprot:P96174; PYRB_VIBS2 ASPARTATE CARBAMOYLTRANSFERASE; E=7e-30 embl:CAC11715.1; (AL445064) probable aspartate; E=2e-29 COG: AF0106; COG0540 Aspartate carbamoyltransferase, catalytic chain; E=2e-32 AF1255; COG0078 Ornithine carbamoyltransferase; E=2e-10 PFAM: PF02729; Aspartate/ornithine carbamoyltransfe; E=3.6e-20 PF00185; Aspartate/ornithine carbamoyltransfe; E=3e-07; aspartate carbamoyltransferase 7130204..7131286 Rhodopirellula baltica SH 1 1794344 NP_870970.1 CDS asnB NC_005027.1 7131355 7133274 D PMID: 10498721 best DB hits: BLAST: gb:AAG02363.1; AF210249_22 (AF210249) asparagine synthetase; E=1e-57 swissprot:P54420; ASNB_BACSU ASPARAGINE SYNTHETASE; E=3e-50 ddbj:BAB05227.1; (AP001512) asparagine synthetase [Bacillus; E=4e-49 COG: BS_asnB; COG0367 Asparagine synthase (glutamine-hydrolyzing); E=2e-51 PFAM: PF00310; Glutamine amidotransferases clas; E=4.1e-15 PF00733; Asparagine synthase; E=1.6e-13; asparagine synthetase 7131355..7133274 Rhodopirellula baltica SH 1 1793403 NP_870971.1 CDS amaB NC_005027.1 7133154 7134518 D allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 7133154..7134518 Rhodopirellula baltica SH 1 1792275 NP_870972.1 CDS RB13306 NC_005027.1 7134537 7135280 D best DB hits: BLAST: pir:G82957; hypothetical protein PA5507 [imported] - Pseudomonas; E=8e-34 embl:CAC12181.1; (AL445066) N-carbamoylsarcosine amidase related; E=2e-10 embl:CAC11866.1; (AL445065) conserved hypothetical protein; E=4e-09 COG: PA5507; COG1335 Amidases related to nicotinamidase; E=7e-35 TM0133; COG1535 2,3-Dihydro-2,3 dihydroxybenzoate synthase; E=0.001 aq_994; COG1335 Amidases related to nicotinamidase; E=0.003 PFAM: PF00857; Isochorismatase; E=3e-15; N-carbamoylsarcosine amidase related protein- amidase 7134537..7135280 Rhodopirellula baltica SH 1 1793486 NP_870973.1 CDS RB13309 NC_005027.1 7135460 7136875 D PMID: 8063110 PMID: 8195067 PMID: 11372197 best DB hits: BLAST: gb:AAD05531.1; (AF083240) c-type cytochrome precursor [Shewanella; E=5e-07 gb:AAD05534.1; (AF083240) deca-heme c-type cytochrome [Shewanella; E=4e-06 swissprot:Q57142; C554_NITEU CYTOCHROME C-554 PRECURSOR (C554); E=3e-04; c-type cytochrome precursor 7135460..7136875 Rhodopirellula baltica SH 1 1790516 NP_870974.1 CDS RB13311 NC_005027.1 7137091 7137201 D hypothetical protein 7137091..7137201 Rhodopirellula baltica SH 1 1794243 NP_870975.1 CDS RB13312 NC_005027.1 7137173 7138438 R best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein complement(7137173..7138438) Rhodopirellula baltica SH 1 1793555 NP_870976.1 CDS RB13316 NC_005027.1 7138623 7138898 R signal peptide complement(7138623..7138898) Rhodopirellula baltica SH 1 1794764 NP_870977.1 CDS RB13317 NC_005027.1 7138905 7140134 R best DB hits: BLAST: pir:S76130; hypothetical protein - Synechocystis sp. (strain PCC; E=0.002 PFAM: PF00981; Rotavirus RNA-binding Protein 53 (N; E=0.37; hypothetical protein complement(7138905..7140134) Rhodopirellula baltica SH 1 1794168 NP_870978.1 CDS RB13318 NC_005027.1 7140082 7140198 R hypothetical protein complement(7140082..7140198) Rhodopirellula baltica SH 1 1790341 NP_870979.1 CDS RB13319 NC_005027.1 7140295 7141560 R best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein complement(7140295..7141560) Rhodopirellula baltica SH 1 1790037 NP_870980.1 CDS RB13323 NC_005027.1 7141536 7141673 D hypothetical protein 7141536..7141673 Rhodopirellula baltica SH 1 1793099 NP_870981.1 CDS RB13324 NC_005027.1 7141677 7141787 D hypothetical protein 7141677..7141787 Rhodopirellula baltica SH 1 1790140 NP_870982.1 CDS RB13325 NC_005027.1 7142044 7142310 R hypothetical protein complement(7142044..7142310) Rhodopirellula baltica SH 1 1794265 NP_870983.1 CDS RB13327 NC_005027.1 7142336 7143601 R best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein complement(7142336..7143601) Rhodopirellula baltica SH 1 1790705 NP_870984.1 CDS RB13329 NC_005027.1 7143626 7143760 R hypothetical protein complement(7143626..7143760) Rhodopirellula baltica SH 1 1792116 NP_870985.1 CDS RB13330 NC_005027.1 7143770 7145536 R best DB hits: BLAST: gb:AAF26789.1; AC016829_13 (AC016829) O-linked GlcNAc; E=7e-08 gb:AAF51432.1; (AE003587) BcDNA:GH12144 gene product [Drosophila; E=3e-05 pir:S74806; hypothetical protein sll1628 - Synechocystis sp. (strain; E=2e-04 COG: sll1628; COG0457 TPR-repeat-containing proteins; E=2e-05 PFAM: PF02516; Oligosaccharyl transferase STT3 subu; E=0.29 PF00515; TPR Domain; E=0.03; O-linked GlcNAc transferase- TPR-containing transmembrane protein complement(7143770..7145536) Rhodopirellula baltica SH 1 1794573 RBt01 tRNA RBt01 NC_005027.1 15141 15217 D tRNA-Arg 15141..15217 Rhodopirellula baltica SH 1 3284836 RBt02 tRNA RBt02 NC_005027.1 86868 86941 D tRNA-Val 86868..86941 Rhodopirellula baltica SH 1 3284825 RBt03 tRNA RBt03 NC_005027.1 133023 133099 D tRNA-Val 133023..133099 Rhodopirellula baltica SH 1 3284839 RBt04 tRNA RBt04 NC_005027.1 231979 232052 D tRNA-Asp 231979..232052 Rhodopirellula baltica SH 1 3284841 RBt05 tRNA RBt05 NC_005027.1 425584 425655 R tRNA-Leu complement(425584..425655) Rhodopirellula baltica SH 1 3284770 RBt06 tRNA RBt06 NC_005027.1 425672 425742 R tRNA-Ala complement(425672..425742) Rhodopirellula baltica SH 1 3284811 RBt07 tRNA RBt07 NC_005027.1 426162 426236 R tRNA-Glu complement(426162..426236) Rhodopirellula baltica SH 1 3284803 RBt08 tRNA RBt08 NC_005027.1 426431 426504 R tRNA-OTHER complement(426431..426504) Rhodopirellula baltica SH 1 3284843 RBt09 tRNA RBt09 NC_005027.1 426774 426845 R tRNA-Asn complement(426774..426845) Rhodopirellula baltica SH 1 3284800 RBt10 tRNA RBt10 NC_005027.1 426854 426924 R tRNA-Gly complement(426854..426924) Rhodopirellula baltica SH 1 3284782 RBt11 tRNA RBt11 NC_005027.1 427045 427117 R tRNA-Lys complement(427045..427117) Rhodopirellula baltica SH 1 3284818 RBt12 tRNA RBt12 NC_005027.1 427143 427215 R tRNA-Ile complement(427143..427215) Rhodopirellula baltica SH 1 3284822 RBt13 tRNA RBt13 NC_005027.1 427480 427552 R tRNA-Pro complement(427480..427552) Rhodopirellula baltica SH 1 3284821 RBt14 tRNA RBt14 NC_005027.1 468301 468382 D tRNA-Ser 468301..468382 Rhodopirellula baltica SH 1 3284813 RBt15 tRNA RBt15 NC_005027.1 574208 574291 D tRNA-Leu 574208..574291 Rhodopirellula baltica SH 1 3284778 RBt16 tRNA RBt16 NC_005027.1 790270 790354 D tRNA-Leu 790270..790354 Rhodopirellula baltica SH 1 3284833 RBt17 tRNA RBt17 NC_005027.1 1034374 1034447 D tRNA-Thr 1034374..1034447 Rhodopirellula baltica SH 1 3284832 RBt18 tRNA RBt18 NC_005027.1 1124293 1124381 D tRNA-Ser 1124293..1124381 Rhodopirellula baltica SH 1 3284806 RBt19 tRNA RBt19 NC_005027.1 1124509 1124581 D tRNA-Lys 1124509..1124581 Rhodopirellula baltica SH 1 3284807 RBt20 tRNA RBt20 NC_005027.1 1209090 1209161 D tRNA-Gln 1209090..1209161 Rhodopirellula baltica SH 1 3284846 RBt21 tRNA RBt21 NC_005027.1 1636075 1636151 R tRNA-Met complement(1636075..1636151) Rhodopirellula baltica SH 1 3284829 RBt22 tRNA RBt22 NC_005027.1 1916738 1916814 R tRNA-Pro complement(1916738..1916814) Rhodopirellula baltica SH 1 3284845 RBt23 tRNA RBt23 NC_005027.1 2104395 2104468 D tRNA-Arg 2104395..2104468 Rhodopirellula baltica SH 1 3284812 RBt24 tRNA RBt24 NC_005027.1 2156459 2156532 D tRNA-His 2156459..2156532 Rhodopirellula baltica SH 1 3284835 RBt25 tRNA RBt25 NC_005027.1 2481587 2481660 R tRNA-Arg complement(2481587..2481660) Rhodopirellula baltica SH 1 3284779 RBt26 tRNA RBt26 NC_005027.1 2823426 2823502 D tRNA-Arg 2823426..2823502 Rhodopirellula baltica SH 1 3284776 RBt27 tRNA RBt27 NC_005027.1 2964996 2965068 R tRNA-Gly complement(2964996..2965068) Rhodopirellula baltica SH 1 3284774 RBt28 tRNA RBt28 NC_005027.1 3088066 3088138 R tRNA-Ala complement(3088066..3088138) Rhodopirellula baltica SH 1 3284819 RBt29 tRNA RBt29 NC_005027.1 3163724 3163810 D tRNA-Ser 3163724..3163810 Rhodopirellula baltica SH 1 3284848 RBt30 tRNA RBt30 NC_005027.1 3188257 3188330 D tRNA-Pro 3188257..3188330 Rhodopirellula baltica SH 1 3284810 RBt31 tRNA RBt31 NC_005027.1 3370937 3371021 D tRNA-Leu 3370937..3371021 Rhodopirellula baltica SH 1 3284831 RBt32 tRNA RBt32 NC_005027.1 3655829 3655905 R tRNA-Met complement(3655829..3655905) Rhodopirellula baltica SH 1 3284820 RBt33 tRNA RBt33 NC_005027.1 4216684 4216756 D tRNA-Thr 4216684..4216756 Rhodopirellula baltica SH 1 3284771 RBt34 tRNA RBt34 NC_005027.1 4216923 4217004 D tRNA-Tyr 4216923..4217004 Rhodopirellula baltica SH 1 3284809 RBt35 tRNA RBt35 NC_005027.1 4217122 4217192 D tRNA-Gly 4217122..4217192 Rhodopirellula baltica SH 1 3284802 RBt36 tRNA RBt36 NC_005027.1 4217195 4217269 D tRNA-Thr 4217195..4217269 Rhodopirellula baltica SH 1 3284772 RBt37 tRNA RBt37 NC_005027.1 4218751 4218823 D tRNA-Trp 4218751..4218823 Rhodopirellula baltica SH 1 3284773 RBt38 tRNA RBt38 NC_005027.1 4355716 4355788 D tRNA-Glu 4355716..4355788 Rhodopirellula baltica SH 1 3284780 RBt39 tRNA RBt39 NC_005027.1 4615129 4615201 R tRNA-Ala complement(4615129..4615201) Rhodopirellula baltica SH 1 3284783 RBt40 tRNA RBt40 NC_005027.1 4615279 4615352 R tRNA-Ile complement(4615279..4615352) Rhodopirellula baltica SH 1 3284814 RBt41 tRNA RBt41 NC_005027.1 4667213 4667295 D tRNA-Ser 4667213..4667295 Rhodopirellula baltica SH 1 3284808 RBt42 tRNA RBt42 NC_005027.1 4745532 4745616 R tRNA-Leu complement(4745532..4745616) Rhodopirellula baltica SH 1 3284791 RBt43 tRNA RBt43 NC_005027.1 5267340 5267412 R tRNA-Asn complement(5267340..5267412) Rhodopirellula baltica SH 1 3284823 RBt44 tRNA RBt44 NC_005027.1 5343020 5343101 R tRNA-Leu complement(5343020..5343101) Rhodopirellula baltica SH 1 3284847 RBt45 tRNA RBt45 NC_005027.1 5811610 5811682 R tRNA-Phe complement(5811610..5811682) Rhodopirellula baltica SH 1 3284842 RBt46 tRNA RBt46 NC_005027.1 5858391 5858464 R tRNA-Arg complement(5858391..5858464) Rhodopirellula baltica SH 1 3284826 RBt47 tRNA RBt47 NC_005027.1 5880607 5880681 D tRNA-OTHER 5880607..5880681 Rhodopirellula baltica SH 1 3284796 RB11437 tRNA RB11437 NC_005027.1 6197615 6197685 R tRNA-OTHER complement(6197615..6197685) Rhodopirellula baltica SH 1 4484209 RBt48 tRNA RBt48 NC_005027.1 6198097 6198169 R tRNA-OTHER complement(6198097..6198169) Rhodopirellula baltica SH 1 3284834 RBt49 tRNA RBt49 NC_005027.1 6198373 6198444 R tRNA-Arg complement(6198373..6198444) Rhodopirellula baltica SH 1 3284801 RBt50 tRNA RBt50 NC_005027.1 6198644 6198714 R tRNA-OTHER complement(6198644..6198714) Rhodopirellula baltica SH 1 3284840 RBt51 tRNA RBt51 NC_005027.1 6198726 6198798 R tRNA-Val complement(6198726..6198798) Rhodopirellula baltica SH 1 3284786 RBt52 tRNA RBt52 NC_005027.1 6198809 6198884 R tRNA-Leu complement(6198809..6198884) Rhodopirellula baltica SH 1 3284787 RBt53 tRNA RBt53 NC_005027.1 6199058 6199141 R tRNA-Leu complement(6199058..6199141) Rhodopirellula baltica SH 1 3284785 RBt54 tRNA RBt54 NC_005027.1 6199155 6199228 R tRNA-Leu complement(6199155..6199228) Rhodopirellula baltica SH 1 3284790 RBt55 tRNA RBt55 NC_005027.1 6199241 6199312 R tRNA-Leu complement(6199241..6199312) Rhodopirellula baltica SH 1 3284777 RBt56 tRNA RBt56 NC_005027.1 6199318 6199388 R tRNA-Ala complement(6199318..6199388) Rhodopirellula baltica SH 1 3284781 RBt57 tRNA RBt57 NC_005027.1 6199407 6199480 R tRNA-Leu complement(6199407..6199480) Rhodopirellula baltica SH 1 3284775 RBt58 tRNA RBt58 NC_005027.1 6199865 6199936 R tRNA-Val complement(6199865..6199936) Rhodopirellula baltica SH 1 3284837 RBt59 tRNA RBt59 NC_005027.1 6199956 6200026 R tRNA-Trp complement(6199956..6200026) Rhodopirellula baltica SH 1 3284797 RBt60 tRNA RBt60 NC_005027.1 6200255 6200329 R tRNA-Glu complement(6200255..6200329) Rhodopirellula baltica SH 1 3284844 RBt61 tRNA RBt61 NC_005027.1 6200602 6200675 R tRNA-OTHER complement(6200602..6200675) Rhodopirellula baltica SH 1 3284828 RBt62 tRNA RBt62 NC_005027.1 6200692 6200766 R tRNA-Gln complement(6200692..6200766) Rhodopirellula baltica SH 1 3284788 RBt63 tRNA RBt63 NC_005027.1 6200873 6200944 R tRNA-Gly complement(6200873..6200944) Rhodopirellula baltica SH 1 3284805 RBt64 tRNA RBt64 NC_005027.1 6201030 6201101 R tRNA-Asn complement(6201030..6201101) Rhodopirellula baltica SH 1 3284789 RBt65 tRNA RBt65 NC_005027.1 6201110 6201180 R tRNA-Gly complement(6201110..6201180) Rhodopirellula baltica SH 1 3284794 RBt66 tRNA RBt66 NC_005027.1 6201233 6201304 R tRNA-Ala complement(6201233..6201304) Rhodopirellula baltica SH 1 3284830 RBt67 tRNA RBt67 NC_005027.1 6201325 6201397 R tRNA-Lys complement(6201325..6201397) Rhodopirellula baltica SH 1 3284838 RBt68 tRNA RBt68 NC_005027.1 6201475 6201547 R tRNA-Ile complement(6201475..6201547) Rhodopirellula baltica SH 1 3284799 RBt69 tRNA RBt69 NC_005027.1 6201559 6201631 R tRNA-Lys complement(6201559..6201631) Rhodopirellula baltica SH 1 3284793 RBt70 tRNA RBt70 NC_005027.1 6201799 6201871 R tRNA-Pro complement(6201799..6201871) Rhodopirellula baltica SH 1 3284792 RBt71 tRNA RBt71 NC_005027.1 6238009 6238082 R tRNA-Met complement(6238009..6238082) Rhodopirellula baltica SH 1 3284804 RBt72 tRNA RBt72 NC_005027.1 6260778 6260850 D tRNA-Cys 6260778..6260850 Rhodopirellula baltica SH 1 3284816 RBt73 tRNA RBt73 NC_005027.1 6260960 6261032 D tRNA-Lys 6260960..6261032 Rhodopirellula baltica SH 1 3284784 RBt74 tRNA RBt74 NC_005027.1 6578179 6578252 D tRNA-Val 6578179..6578252 Rhodopirellula baltica SH 1 3284817 RBt75 tRNA RBt75 NC_005027.1 6988936 6989010 D tRNA-Pro 6988936..6989010 Rhodopirellula baltica SH 1 3284795 RBr01 rRNA RBr01 NC_005027.1 4611203 4611312 R 5S ribosomal RNA complement(4611203..4611312) Rhodopirellula baltica SH 1 3284824 RBr02 rRNA RBr02 NC_005027.1 4611420 4614312 R 23S ribosomal RNA complement(4611420..4614312) Rhodopirellula baltica SH 1 3284827 RBr03 rRNA RBr03 NC_005027.1 5076964 5078478 R 16S ribosomal RNA complement(5076964..5078478) Rhodopirellula baltica SH 1 3284815