-- dump date 20140620_032308 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type NP_863660.1 32470667 1797122 complement(3..182) 1 NC_005027.1 signal peptide 182 1797122 RB2 Rhodopirellula baltica SH 1 signal peptide NP_863660.1 3 R 243090 CDS NP_863661.1 32470668 1797135 39..260 1 NC_005027.1 signal peptide 260 1797135 RB3 Rhodopirellula baltica SH 1 signal peptide NP_863661.1 39 D 243090 CDS NP_863662.1 32470669 1796079 complement(399..1514) 1 NC_005027.1 signal peptide 1514 1796079 RB5 Rhodopirellula baltica SH 1 signal peptide NP_863662.1 399 R 243090 CDS NP_863663.1 32470670 1796479 1548..1706 1 NC_005027.1 hypothetical protein 1706 1796479 RB7 Rhodopirellula baltica SH 1 hypothetical protein NP_863663.1 1548 D 243090 CDS NP_863664.1 32470671 1797090 complement(1733..5263) 1 NC_005027.1 best DB hits: BLAST: pir:D83545; probable helicase PA0799 [imported] - Pseudomonas; E=7e-95 embl:CAA67095.1; (X98455) SNF [Bacillus cereus]; E=8e-94 pir:C72027; swisnf family helicase_2 - Chlamydophila pneumoniae; E=4e-87 COG: PA0799; COG0553 Superfamily II DNA/RNA helicases, SNF2 family; E=7e-96 PFAM: PF02803; Thiolase, C-terminal domain; E=0.11 PF00176; SNF2 and others N-terminal domain; E=3.9e-64 PF00271; Helicase conserved C-terminal doma; E=1.2e-24; helicase 5263 1797090 RB8 Rhodopirellula baltica SH 1 helicase NP_863664.1 1733 R 243090 CDS NP_863665.1 32470672 1793489 complement(5458..5850) 1 NC_005027.1 hypothetical protein 5850 1793489 RB13 Rhodopirellula baltica SH 1 hypothetical protein NP_863665.1 5458 R 243090 CDS NP_863666.1 32470673 1794072 5836..7386 1 NC_005027.1 hypothetical protein 7386 1794072 RB14 Rhodopirellula baltica SH 1 hypothetical protein NP_863666.1 5836 D 243090 CDS NP_863667.1 32470674 1791795 complement(7575..8069) 1 NC_005027.1 hypothetical protein 8069 1791795 RB16 Rhodopirellula baltica SH 1 hypothetical protein NP_863667.1 7575 R 243090 CDS NP_863668.1 32470675 1796778 complement(7757..8251) 1 NC_005027.1 hypothetical protein 8251 1796778 RB17 Rhodopirellula baltica SH 1 hypothetical protein NP_863668.1 7757 R 243090 CDS NP_863669.1 32470676 1792679 complement(7939..8433) 1 NC_005027.1 hypothetical protein 8433 1792679 RB18 Rhodopirellula baltica SH 1 hypothetical protein NP_863669.1 7939 R 243090 CDS NP_863670.1 32470677 1791988 complement(8303..8542) 1 NC_005027.1 hypothetical protein 8542 1791988 RB19 Rhodopirellula baltica SH 1 hypothetical protein NP_863670.1 8303 R 243090 CDS NP_863671.1 32470678 1795238 complement(8570..10894) 1 NC_005027.1 PMID: 2506434 best DB hits: BLAST: pir:B32491; myosin heavy chain 2, muscle - fruit fly (Drosophila; E=3e-09 pir:A32491; myosin heavy chain 1, muscle - fruit fly (Drosophila; E=3e-09 swissprot:P05661; MYSA_DROME MYOSIN HEAVY CHAIN, MUSCLE; E=4e-09 COG: VNG0342G; COG1196 Chromosome segregation ATPases; E=5e-05 aefA; COG3264 Small-conductance mechanosensitive channel; E=9e-04 Ta0787; COG1196 Chromosome segregation ATPases; E=0.002 PFAM: PF00038; Intermediate filament protein; E=0.87; hypothetical protein 10894 1795238 RB20 Rhodopirellula baltica SH 1 hypothetical protein NP_863671.1 8570 R 243090 CDS NP_863672.1 32470679 1792188 11131..13935 1 NC_005027.1 best DB hits: BLAST: pir:F75417; L-sorbosone dehydrogenase - Deinococcus radiodurans; E=0.13 embl:CAB94635.1; (AL359215) secreted glycosyl hydrolase.; E=0.26 PFAM: PF00034; Cytochrome c; E=0.35; L-sorbosone dehydrogenase 13935 1792188 RB24 Rhodopirellula baltica SH 1 L-sorbosone dehydrogenase NP_863672.1 11131 D 243090 CDS NP_863673.1 32470680 1793901 14053..14556 1 NC_005027.1 hypothetical protein 14556 1793901 RB27 Rhodopirellula baltica SH 1 hypothetical protein NP_863673.1 14053 D 243090 CDS NP_863674.1 32470681 1790242 complement(14498..15148) 1 NC_005027.1 hypothetical protein 15148 1790242 RB29 Rhodopirellula baltica SH 1 hypothetical protein NP_863674.1 14498 R 243090 CDS NP_863675.1 32470682 1796933 complement(15460..15627) 1 NC_005027.1 hypothetical protein 15627 1796933 RB33 Rhodopirellula baltica SH 1 hypothetical protein NP_863675.1 15460 R 243090 CDS NP_863676.1 32470683 1792112 complement(15692..16483) 1 NC_005027.1 hypothetical protein 16483 1792112 RB34 Rhodopirellula baltica SH 1 hypothetical protein NP_863676.1 15692 R 243090 CDS NP_863677.1 32470684 1796477 complement(16591..17700) 1 NC_005027.1 hypothetical protein 17700 1796477 RB35 Rhodopirellula baltica SH 1 hypothetical protein NP_863677.1 16591 R 243090 CDS NP_863678.1 32470685 1792703 complement(17693..17839) 1 NC_005027.1 hypothetical protein 17839 1792703 RB36 Rhodopirellula baltica SH 1 hypothetical protein NP_863678.1 17693 R 243090 CDS NP_863679.1 32470686 1795873 complement(17846..18328) 1 NC_005027.1 signal peptide 18328 1795873 RB37 Rhodopirellula baltica SH 1 signal peptide NP_863679.1 17846 R 243090 CDS NP_863680.1 32470687 1796519 18331..18636 1 NC_005027.1 hypothetical protein 18636 1796519 RB38 Rhodopirellula baltica SH 1 hypothetical protein NP_863680.1 18331 D 243090 CDS NP_863681.1 32470688 1790664 complement(18668..19417) 1 NC_005027.1 PMID: 2820936 best DB hits: BLAST: pir:S46409; hypothetical protein - Aeromonas salmonicida -----; E=2e-29 embl:CAA05973.1; (AJ003194) transposase [Lactobacillus casei]; E=2e-27 swissprot:P37247; TRA4_BACFR TRANSPOSASE FOR INSERTION SEQUENCE; E=2e-26 COG: NMB0225; COG2826 Transposase, IS30 family; E=3e-27 PFAM: PF00665; Integrase core domain; E=2.4e-16; transposase 19417 1790664 RB39 Rhodopirellula baltica SH 1 transposase NP_863681.1 18668 R 243090 CDS NP_863682.1 32470689 1791099 complement(19461..19922) 1 NC_005027.1 hypothetical protein 19922 1791099 RB40 Rhodopirellula baltica SH 1 hypothetical protein NP_863682.1 19461 R 243090 CDS NP_863683.1 32470690 1793422 complement(20053..20550) 1 NC_005027.1 hypothetical protein 20550 1793422 RB41 Rhodopirellula baltica SH 1 hypothetical protein NP_863683.1 20053 R 243090 CDS NP_863684.1 32470691 1790001 complement(20627..20791) 1 NC_005027.1 hypothetical protein 20791 1790001 RB43 Rhodopirellula baltica SH 1 hypothetical protein NP_863684.1 20627 R 243090 CDS NP_863685.1 32470692 1795968 complement(20825..21127) 1 NC_005027.1 hypothetical protein 21127 1795968 RB44 Rhodopirellula baltica SH 1 hypothetical protein NP_863685.1 20825 R 243090 CDS NP_863686.1 32470693 1796283 complement(21151..21471) 1 NC_005027.1 hypothetical protein 21471 1796283 RB45 Rhodopirellula baltica SH 1 hypothetical protein NP_863686.1 21151 R 243090 CDS NP_863687.1 32470694 1796277 complement(21455..22282) 1 NC_005027.1 hypothetical protein 22282 1796277 RB46 Rhodopirellula baltica SH 1 hypothetical protein NP_863687.1 21455 R 243090 CDS NP_863688.1 32470695 1794224 complement(22495..23190) 1 NC_005027.1 hypothetical protein 23190 1794224 RB50 Rhodopirellula baltica SH 1 hypothetical protein NP_863688.1 22495 R 243090 CDS NP_863689.1 32470696 1791614 complement(23323..23670) 1 NC_005027.1 hypothetical protein 23670 1791614 RB52 Rhodopirellula baltica SH 1 hypothetical protein NP_863689.1 23323 R 243090 CDS NP_863690.1 32470697 1793032 complement(23873..24472) 1 NC_005027.1 signal peptide 24472 1793032 RB54 Rhodopirellula baltica SH 1 signal peptide NP_863690.1 23873 R 243090 CDS NP_863691.1 32470698 1797134 complement(24564..24833) 1 NC_005027.1 hypothetical protein 24833 1797134 RB56 Rhodopirellula baltica SH 1 hypothetical protein NP_863691.1 24564 R 243090 CDS NP_863692.1 32470699 1789905 complement(24939..25208) 1 NC_005027.1 hypothetical protein 25208 1789905 RB59 Rhodopirellula baltica SH 1 hypothetical protein NP_863692.1 24939 R 243090 CDS NP_863693.1 32470700 1794111 25165..25359 1 NC_005027.1 hypothetical protein 25359 1794111 RB60 Rhodopirellula baltica SH 1 hypothetical protein NP_863693.1 25165 D 243090 CDS NP_863694.1 32470701 1795806 25378..25554 1 NC_005027.1 hypothetical protein 25554 1795806 RB61 Rhodopirellula baltica SH 1 hypothetical protein NP_863694.1 25378 D 243090 CDS NP_863695.1 32470702 1792502 25588..25983 1 NC_005027.1 hypothetical protein 25983 1792502 RB62 Rhodopirellula baltica SH 1 hypothetical protein NP_863695.1 25588 D 243090 CDS NP_863696.1 32470703 1793639 26082..26336 1 NC_005027.1 hypothetical protein 26336 1793639 RB66 Rhodopirellula baltica SH 1 hypothetical protein NP_863696.1 26082 D 243090 CDS NP_863697.1 32470704 1795819 26435..27682 1 NC_005027.1 signal peptide 27682 1795819 RB68 Rhodopirellula baltica SH 1 signal peptide NP_863697.1 26435 D 243090 CDS NP_863698.1 32470705 1792356 27689..28141 1 NC_005027.1 signal peptide 28141 1792356 RB71 Rhodopirellula baltica SH 1 signal peptide NP_863698.1 27689 D 243090 CDS NP_863699.1 32470706 1795967 28138..28674 1 NC_005027.1 signal peptide 28674 1795967 RB72 Rhodopirellula baltica SH 1 signal peptide NP_863699.1 28138 D 243090 CDS NP_863700.1 32470707 1795918 28727..29023 1 NC_005027.1 hypothetical protein 29023 1795918 RB73 Rhodopirellula baltica SH 1 hypothetical protein NP_863700.1 28727 D 243090 CDS NP_863701.1 32470708 1792371 29164..29736 1 NC_005027.1 signal peptide 29736 1792371 RB76 Rhodopirellula baltica SH 1 signal peptide NP_863701.1 29164 D 243090 CDS NP_863702.1 32470709 1795532 29168..29692 1 NC_005027.1 hypothetical protein 29692 1795532 RB77 Rhodopirellula baltica SH 1 hypothetical protein NP_863702.1 29168 D 243090 CDS NP_863703.1 32470710 1791184 29767..30276 1 NC_005027.1 hypothetical protein 30276 1791184 RB80 Rhodopirellula baltica SH 1 hypothetical protein NP_863703.1 29767 D 243090 CDS NP_863704.1 32470711 1793296 30279..30440 1 NC_005027.1 hypothetical protein 30440 1793296 RB81 Rhodopirellula baltica SH 1 hypothetical protein NP_863704.1 30279 D 243090 CDS NP_863705.1 32470712 1795445 30494..31135 1 NC_005027.1 PMID: 10192928 best DB hits: BLAST: ddbj:BAB04609.1; (AP001510) BH0890~unknown conserved protein in; E=2e-31 embl:CAB95973.1; (AL360034) hypothetical protein 2SCG4.02c; E=2e-25 pir:A70710; hypothetical protein Rv0790c - Mycobacterium; E=1e-05 COG: BH0890; COG1305 transglutaminases, cysteine; E=2e-32 PFAM: PF01841; Transglutaminase-like superfam; E=0.42; cysteine protease 31135 1795445 RB82 Rhodopirellula baltica SH 1 cysteine protease NP_863705.1 30494 D 243090 CDS NP_863706.1 32470713 1796014 complement(31291..31473) 1 NC_005027.1 hypothetical protein 31473 1796014 RB84 Rhodopirellula baltica SH 1 hypothetical protein NP_863706.1 31291 R 243090 CDS NP_863707.1 32470714 1790746 31507..32739 1 NC_005027.1 PMID: 11823852 best DB hits: BLAST: pir:A83071; hypothetical protein PA4591 [imported] - Pseudomonas; E=0.044 swissprot:P50533; XCPE_XENLA CHROMOSOME ASSEMBLY PROTEIN XCAP-E; E=0.26 gb:AAF73831.1; AF183959_2 (AF183959) periplasmic linker protein; E=0.62 COG: PA4591; COG0845 Membrane-fusion protein; E=0.004; hypothetical protein 32739 1790746 RB85 Rhodopirellula baltica SH 1 hypothetical protein NP_863707.1 31507 D 243090 CDS NP_863708.1 32470715 1792035 32765..34051 1 NC_005027.1 signal peptide 34051 1792035 RB87 Rhodopirellula baltica SH 1 signal peptide NP_863708.1 32765 D 243090 CDS NP_863709.1 32470716 1795407 34254..35666 1 NC_005027.1 PMID: 8760916 best DB hits: BLAST: embl:CAC18240.1; (AL451018) conserved hypothetical protein; E=2e-12 ddbj:BAB10478.1; (AB016888) gene_id:MDH9.6~similar to unknown; E=2e-12 embl:CAB92825.1; (AL356892) hypothetical protein [Streptomyces; E=6e-05; alkaline phosphatase 35666 phoD 1795407 phoD Rhodopirellula baltica SH 1 alkaline phosphatase NP_863709.1 34254 D 243090 CDS NP_863710.1 32470717 1796478 35663..36370 1 NC_005027.1 best DB hits: PFAM: PF00975; Thioesterase domain; E=0.51 PF00561; alpha/beta hydrolase fold; E=0.084; hypothetical protein 36370 1796478 RB89 Rhodopirellula baltica SH 1 hypothetical protein NP_863710.1 35663 D 243090 CDS NP_863711.1 32470718 1792218 complement(36400..38457) 1 NC_005027.1 PMID: 8760916 best DB hits: BLAST: pir:F83157; hypothetical protein PA3910 [imported] - Pseudomonas; E=6e-05 ddbj:BAA06483.1; (D30808) unknown [Bacillus subtilis]; E=1e-04 swissprot:P42251; PPBD_BACSU ALKALINE PHOSPHATASE D PRECURSOR; E=1e-04; alkaline phosphatase 38457 phoD 1792218 phoD Rhodopirellula baltica SH 1 alkaline phosphatase NP_863711.1 36400 R 243090 CDS NP_863712.1 32470719 1794710 complement(38470..39441) 1 NC_005027.1 signal peptide 39441 1794710 RB93 Rhodopirellula baltica SH 1 signal peptide NP_863712.1 38470 R 243090 CDS NP_863713.1 32470720 1796866 complement(39617..40090) 1 NC_005027.1 hypothetical protein 40090 1796866 RB95 Rhodopirellula baltica SH 1 hypothetical protein NP_863713.1 39617 R 243090 CDS NP_863714.1 32470721 1796533 complement(40275..40571) 1 NC_005027.1 PMID: 9679194 PMID: 2546769 best DB hits: BLAST: pir:E75218; lsu ribosomal protein l37ae (rpl37ae) PAB7067 -; E=0.14 swissprot:O74106; R37A_PYRHO 50S RIBOSOMAL PROTEIN L37AE -----; E=0.30; 50S ribosomal protein L37 40571 1796533 RB98 Rhodopirellula baltica SH 1 50S ribosomal protein L37 NP_863714.1 40275 R 243090 CDS NP_863715.1 32470722 1796505 complement(40726..41097) 1 NC_005027.1 hypothetical protein 41097 1796505 RB100 Rhodopirellula baltica SH 1 hypothetical protein NP_863715.1 40726 R 243090 CDS NP_863716.1 32470723 1790506 complement(41251..44415) 1 NC_005027.1 PMID: 2691504 best DB hits: BLAST: pir:H75007; probable acylaminoacyl-peptidase (EC 3.4.19.1) PAB1300; E=6e-18 pir:G82543; conserved hypothetical protein XF2551 [imported] - Xylella; E=1e-16 pir:C71137; hypothetical protein PH0863 - Pyrococcus horikoshii; E=7e-16 COG: PAB1300; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; E=5e-19 VNG2302G; COG1506 Dipeptidyl; E=2e-08 APE1832; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; E=3e-08 PFAM: PF01748; Domain of unknown function DUF3; E=0.37 PF00326; Prolyl oligopeptidase; E=0.042; acylaminoacyl peptidase 44415 1790506 RB101 Rhodopirellula baltica SH 1 acylaminoacyl peptidase NP_863716.1 41251 R 243090 CDS NP_863717.1 32470724 1794687 complement(44265..44834) 1 NC_005027.1 hypothetical protein 44834 1794687 RB104 Rhodopirellula baltica SH 1 hypothetical protein NP_863717.1 44265 R 243090 CDS NP_863718.1 32470725 1795114 44735..45886 1 NC_005027.1 PMID: 9389475 PMID: 7548211 best DB hits: BLAST: gb:AAB89309.1; (AE000969) cysteine proteinase, ; E=8e-04 gb:AAG54838.1; AE005229_1 (AE005229) RTX family exoprotein; E=0.19 gb:AAD56325.1; AC009326_12 (AC009326) unknown protein [Arabidopsis; E=0.84; cysteine proteinase 45886 1795114 RB105 Rhodopirellula baltica SH 1 cysteine proteinase NP_863718.1 44735 D 243090 CDS NP_863719.1 32470726 1790824 45883..47262 1 NC_005027.1 PMID: 8921874 best DB hits: BLAST: pir:A58519; hypothetical 345 protein - Streptomyces coelicolor; E=0.14 pir:H69064; serinethreonine protein kinase related protein -; E=0.20 gb:AAG31169.1; (AF314961) unknown [Salmonella typhimurium]; E=0.64 PFAM: PF01011; PQQ enzyme repeat; E=0.2; hypothetical protein 47262 1790824 RB107 Rhodopirellula baltica SH 1 hypothetical protein NP_863719.1 45883 D 243090 CDS NP_863720.1 32470727 1795996 complement(47345..49093) 1 NC_005027.1 PMID: 8244397 PMID: 8325651 best DB hits: BLAST: gb:AAA16877.1; (L13329) iduronate-2-sulfatase [Homo sapiens]; E=3e-58 gb:AAB33747.1; iduronate-2-sulfatase, IDS {EC 3.1.6.13} [human,; E=1e-57 gb:AAA37880.1; (L07921) iduronate sulfatase [Mus musculus]; E=1e-54 COG: PA0031; COG3119 Arylsulfatase A and related enzymes; E=2e-36 BS_yqgS; COG1368 Phosphoglycerol transferase and related proteins,; E=1e-06 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=1e-06 PFAM: PF00884; Sulfatase; E=1.7e-28; iduronate-2-sulfatase 49093 1795996 RB110 Rhodopirellula baltica SH 1 iduronate-2-sulfatase NP_863720.1 47345 R 243090 CDS NP_863721.1 32470728 1795268 complement(49329..50216) 1 NC_005027.1 hypothetical protein 50216 1795268 RB112 Rhodopirellula baltica SH 1 hypothetical protein NP_863721.1 49329 R 243090 CDS NP_863722.1 32470729 1796930 complement(50213..51139) 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 51139 1796930 RB115 Rhodopirellula baltica SH 1 signal peptide NP_863722.1 50213 R 243090 CDS NP_863723.1 32470730 1793986 complement(51136..51525) 1 NC_005027.1 hypothetical protein 51525 1793986 RB117 Rhodopirellula baltica SH 1 hypothetical protein NP_863723.1 51136 R 243090 CDS NP_863724.1 32470731 1796245 complement(51522..52031) 1 NC_005027.1 hypothetical protein 52031 1796245 RB118 Rhodopirellula baltica SH 1 hypothetical protein NP_863724.1 51522 R 243090 CDS NP_863725.1 32470732 1796776 complement(52007..52390) 1 NC_005027.1 hypothetical protein 52390 1796776 RB120 Rhodopirellula baltica SH 1 hypothetical protein NP_863725.1 52007 R 243090 CDS NP_863726.1 32470733 1793238 complement(52395..53687) 1 NC_005027.1 PMID: 1738317; hypothetical protein 53687 1793238 RB123 Rhodopirellula baltica SH 1 hypothetical protein NP_863726.1 52395 R 243090 CDS NP_863727.1 32470734 1796000 complement(53678..54571) 1 NC_005027.1 hypothetical protein 54571 1796000 RB125 Rhodopirellula baltica SH 1 hypothetical protein NP_863727.1 53678 R 243090 CDS NP_863728.1 32470735 1794977 complement(54487..55539) 1 NC_005027.1 hypothetical protein 55539 1794977 RB127 Rhodopirellula baltica SH 1 hypothetical protein NP_863728.1 54487 R 243090 CDS NP_863729.1 32470736 1794075 complement(55536..56747) 1 NC_005027.1 PMID: 1588814 best DB hits: BLAST: pir:C75333; general secretion pathway protein E - Deinococcus; E=1e-44 swissprot:P37093; GSPE_VIBCH GENERAL SECRETION PATHWAY PROTEIN E; E=6e-44 pir:C83313; probable type II secretion protein PA2677 [imported] -; E=3e-43 COG: DR1964; COG2804 Predicted ATPases involved in pili biogenesis, PilB; E=1e-45 PFAM: PF00437; Bacterial type II secretion s; E=5.5e-12 PF00448; SRP54-type protein, GTPase do; E=0.15 PF00437; Bacterial type II secretion s; E=5.5e-52; general secretion pathway protein E 56747 gspE 1794075 gspE Rhodopirellula baltica SH 1 general secretion pathway protein E NP_863729.1 55536 R 243090 CDS NP_863730.1 32470737 1791120 complement(56777..56890) 1 NC_005027.1 hypothetical protein 56890 1791120 RB129 Rhodopirellula baltica SH 1 hypothetical protein NP_863730.1 56777 R 243090 CDS NP_863731.1 32470738 1796566 56878..58119 1 NC_005027.1 signal peptide 58119 1796566 RB130 Rhodopirellula baltica SH 1 signal peptide NP_863731.1 56878 D 243090 CDS NP_863732.1 32470739 1790942 complement(58394..58615) 1 NC_005027.1 hypothetical protein 58615 1790942 RB132 Rhodopirellula baltica SH 1 hypothetical protein NP_863732.1 58394 R 243090 CDS NP_863733.1 32470740 1791164 complement(58617..59468) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:G83056; conserved hypothetical protein PA4717 [imported] -; E=1e-59 pir:B65023; hypothetical protein b2475 - Escherichia coli (strain; E=4e-59 gb:AAK04057.1; (AE006233) unknown [Pasteurella multocida]; E=8e-57 COG: PA4717; COG2321 Predicted metalloprotease; E=1e-60; metalloprotease 59468 1791164 RB133 Rhodopirellula baltica SH 1 metalloprotease NP_863733.1 58617 R 243090 CDS NP_863734.1 32470741 1795629 complement(59440..59604) 1 NC_005027.1 hypothetical protein 59604 1795629 RB135 Rhodopirellula baltica SH 1 hypothetical protein NP_863734.1 59440 R 243090 CDS NP_863735.1 32470742 1796034 59847..60875 1 NC_005027.1 PMID: 10493123 best DB hits: BLAST: pir:H75528; conserved hypothetical protein - Deinococcus radiodurans; E=4e-06 pir:S76507; hypothetical protein - Synechocystis sp. (strain PCC; E=7e-06 pir:D81837; hypothetical protein NMA1464 [imported] - Neisseria; E=1e-05 COG: DR0358; COG0354 Predicted aminomethyltransferase related to GcvT; E=4e-07; glycine cleavage system protein T 60875 1796034 RB136 Rhodopirellula baltica SH 1 glycine cleavage system protein T NP_863735.1 59847 D 243090 CDS NP_863736.1 32470743 1793669 60872..61516 1 NC_005027.1 hypothetical protein 61516 1793669 RB138 Rhodopirellula baltica SH 1 hypothetical protein NP_863736.1 60872 D 243090 CDS NP_863737.1 32470744 1790591 61578..64541 1 NC_005027.1 best DB hits: BLAST: swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=2e-31 pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=5e-31 swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=9e-31 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=3e-32 PFAM: PF00069; Protein kinase domain; E=6.9e-49 PF00515; TPR Domain; E=0.72; serine/threonine protein kinase 64541 1790591 RB140 Rhodopirellula baltica SH 1 serine/threonine protein kinase NP_863737.1 61578 D 243090 CDS NP_863738.1 32470745 1795845 complement(64669..66924) 1 NC_005027.1 best DB hits: PFAM: PF00364; Biotin-requiring enzyme; E=0.031 PF00529; HlyD family secretion protein; E=0.78; hypothetical protein 66924 1795845 RB142 Rhodopirellula baltica SH 1 hypothetical protein NP_863738.1 64669 R 243090 CDS NP_863739.1 32470746 1792442 complement(66870..68273) 1 NC_005027.1 best DB hits: BLAST: pir:T31342; ragD protein - Bradyrhizobium japonicum ----- embl:; E=1e-05 pir:B83186; probable RND efflux membrane fusion protein precursor; E=2e-04 gb:AAK03081.1; (AE006139) unknown [Pasteurella multocida]; E=0.001 COG: PA3677; COG0845 Membrane-fusion protein; E=2e-05 PA2836; COG1566 Multidrug resistance efflux pump; E=0.001 VC0165; COG0845 Membrane-fusion protein; E=0.002 PFAM: PF00364; Biotin-requiring enzyme; E=0.021; membrane-fusion protein 68273 1792442 RB144 Rhodopirellula baltica SH 1 membrane-fusion protein NP_863739.1 66870 R 243090 CDS NP_863740.1 32470747 1796294 complement(68277..69164) 1 NC_005027.1 PMID: 8203018 best DB hits: BLAST: pir:C70415; cation efflux system (czcB-like) - Aquifex aeolicus; E=2e-10 pir:B82357; conserved hypothetical protein VC0165 [imported] -; E=3e-10 ddbj:BAA34299.1; (AB015853) MexX [Pseudomonas aeruginosa]; E=5e-08 COG: aq_1331; COG0845 Membrane-fusion protein; E=2e-11 emrA; COG1566 Multidrug resistance efflux pump; E=0.003 PA3402; COG0845 Membrane-fusion protein; E=0.003 PFAM: PF00364; Biotin-requiring enzyme; E=0.0052 PF00529; HlyD family secretion protein; E=6.1e-07; cation efflux system 69164 1796294 RB146 Rhodopirellula baltica SH 1 cation efflux system NP_863740.1 68277 R 243090 CDS NP_863741.1 32470748 1795654 complement(69161..71212) 1 NC_005027.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA 71212 secA 1795654 secA Rhodopirellula baltica SH 1 preprotein translocase subunit SecA NP_863741.1 69161 R 243090 CDS NP_863742.1 32470749 1793115 complement(71197..73215) 1 NC_005027.1 PMID: 9852029 best DB hits: BLAST: gb:AAD12177.1; (AF029405) outer membrane channel protein; E=0.001 gb:AAD30205.1; (AF094824) IbeB [Escherichia coli]; E=0.039 swissprot:Q51487; OPRM_PSEAE OUTER MEMBRANE PROTEIN OPRM PRECURSOR; E=0.049 COG: PA0427; COG1538 Outer membrane protein; E=0.005 PFAM: PF02321; Outer membrane efflux protein; E=0.0013; outer membrane channel protein 73215 1793115 RB149 Rhodopirellula baltica SH 1 outer membrane channel protein NP_863742.1 71197 R 243090 CDS NP_863743.1 32470750 1795998 73100..73390 1 NC_005027.1 hypothetical protein 73390 1795998 RB150 Rhodopirellula baltica SH 1 hypothetical protein NP_863743.1 73100 D 243090 CDS NP_863744.1 32470751 1790021 73233..73403 1 NC_005027.1 hypothetical protein 73403 1790021 RB152 Rhodopirellula baltica SH 1 hypothetical protein NP_863744.1 73233 D 243090 CDS NP_863745.1 32470752 1793983 73499..81046 1 NC_005027.1 PMID: 6091915 best DB hits: BLAST: pir:S75200; fat protein - Synechocystis sp. (strain PCC 6803) -----; E=7e-24 ddbj:BAA88688.1; (AB011533) MEGF7 [Rattus norvegicus]; E=3e-18 ddbj:BAA32468.1; (AB011540) MEGF7 [Homo sapiens]; E=2e-17 COG: sll0656_1; COG3204 Uncharacterized BCR; E=5e-14 PFAM: PF00058; Low-density lipoprotein receptor; E=6.3e-06 PF00028; Cadherin domain; E=0.036 PF00801; PKD domain; E=0.073; lipoprotein receptor-related protein 81046 1793983 RB154 Rhodopirellula baltica SH 1 lipoprotein receptor-related protein NP_863745.1 73499 D 243090 CDS NP_863746.1 32470753 1795400 81043..84024 1 NC_005027.1 PMID: 11406410 best DB hits: BLAST: pir:S75136; sensory transduction histidine kinase slr2104 -; E=2e-69 pir:S75130; sensory transduction histidine kinase slr2098 -; E=4e-63 pir:E83443; probable sensorresponse regulator hybrid PA1611; E=8e-62 COG: VC1349_2; COG0642 Sensory transduction histidine kinases; E=2e-53 PFAM: PF00989; PAS domain; E=5.9e-05 PF00512; His Kinase A (phosphoacceptor); E=4.2e-24 PF02518; Histidine kinase-, DNA gyrase B; E=4.1e-43; sensory transduction histidine kinase 84024 1795400 RB159 Rhodopirellula baltica SH 1 sensory transduction histidine kinase NP_863746.1 81043 D 243090 CDS NP_863747.1 32470754 1796534 complement(84027..84284) 1 NC_005027.1 hypothetical protein 84284 1796534 RB160 Rhodopirellula baltica SH 1 hypothetical protein NP_863747.1 84027 R 243090 CDS NP_863748.1 32470755 1793894 84262..85518 1 NC_005027.1 PMID: 7699720 best DB hits: BLAST: pir:G82211; response regulator VC1348 [imported] - Vibrio cholerae; E=4e-59 embl:CAB89843.1; (AJ251547) response regulator [Xanthomonas; E=2e-56 pir:S75132; sensory transduction system regulatory protein slr2100 -; E=1e-55 COG: VC1348_2; COG2206 HD-GYP domain; E=1e-42 PFAM: PF00072; Response regulator receiver doma; E=1.1e-29 PF01966; HD domain; E=0.003; response regulator 85518 1793894 RB161 Rhodopirellula baltica SH 1 response regulator NP_863748.1 84262 D 243090 CDS NP_863749.1 32470756 1797127 complement(85677..86603) 1 NC_005027.1 best DB hits: BLAST: pir:F81675; conserved hypothetical protein TC0684 [imported] -; E=7e-30 pir:D72066; sam dependent methyltransferase - Chlamydophila; E=1e-27 pir:G71519; probable sam dependent methyltransferase - Chlamydia; E=3e-27 COG: CPn0531; COG1092 Predicted SAM-dependent methyltransferases; E=1e-28; SAM dependent methyltransferase 86603 1797127 RB162 Rhodopirellula baltica SH 1 SAM dependent methyltransferase NP_863749.1 85677 R 243090 CDS NP_863750.1 32470757 1792649 87060..87560 1 NC_005027.1 hypothetical protein 87560 1792649 RB164 Rhodopirellula baltica SH 1 hypothetical protein NP_863750.1 87060 D 243090 CDS NP_863751.1 32470758 1792141 complement(87557..88726) 1 NC_005027.1 best DB hits: BLAST: gb:AAB58155.1; (U82621) hypothetical protein [Shigella flexneri]; E=2e-33 gb:AAF09022.1; (AF139596) unknown [Shigella flexneri]; E=2e-33 gb:AAG55688.1; AE005307_6 (AE005307) unknown in IS600 [Escherichia; E=2e-33 COG: tra5_g4; COG2801 transposase; E=2e-27 PFAM: PF01527; Transposase; E=4.8e-13 PF00665; Integrase core domain; E=3e-39; transposase 88726 1792141 RB165 Rhodopirellula baltica SH 1 transposase NP_863751.1 87557 R 243090 CDS NP_863752.1 32470759 1790407 88683..88847 1 NC_005027.1 hypothetical protein 88847 1790407 RB166 Rhodopirellula baltica SH 1 hypothetical protein NP_863752.1 88683 D 243090 CDS NP_863753.1 32470760 1792187 88901..89317 1 NC_005027.1 PMID: 8041625 best DB hits: BLAST: gb:AAB07489.2; (U66426) transposase [Acidithiobacillus; E=1e-21 gb:AAF60967.1; AF188737_2 (AF188737) transposase [Escherichia; E=1e-20 pir:A47041; probable transposase - Alcaligenes eutrophus insertion; E=1e-09 PFAM: PF01610; Transposase; E=3.9e-09; transposase 89317 1792187 RB168 Rhodopirellula baltica SH 1 transposase NP_863753.1 88901 D 243090 CDS NP_863754.1 32470761 1794529 89333..89623 1 NC_005027.1 PMID: 2824781 best DB hits: BLAST: gb:AAG58100.1; AE005527_3 (AE005527) unknown protein encoded by; E=0.002 gb:AAG53987.1; AF327445_1 (AF327445) transposase A; E=0.003 gb:AAF28119.1; AF153317_15 (AF153317) InsA [Shigella; E=0.007 COG: PA1937; COG2963 Transposase; E=0.004 PFAM: PF01381; Helix-turn-helix; E=0.53 PF01527; Transposase; E=6.1e-18; transposase 89623 1794529 RB170 Rhodopirellula baltica SH 1 transposase NP_863754.1 89333 D 243090 CDS NP_863755.1 32470762 1790646 89626..90504 1 NC_005027.1 best DB hits: BLAST: gb:AAA88919.1; (U13013) ORFB [Leptospira interrogans]; E=3e-47 gb:AAA88916.1; (U13012) ORFB [Leptospira interrogans]; E=1e-46 gb:AAC05649.1; (AF038931) probable transposase-related protein; E=1e-45 COG: DRB0019.2; COG2801 transposase; E=1e-35 PFAM: PF00665; Integrase core domain; E=4.8e-40; transposase 90504 1790646 RB171 Rhodopirellula baltica SH 1 transposase NP_863755.1 89626 D 243090 CDS NP_863756.1 32470763 1792461 90494..91441 1 NC_005027.1 PMID: 10601203 best DB hits: BLAST: gb:AAF60967.1; AF188737_2 (AF188737) transposase [Escherichia; E=6e-41 gb:AAB07489.2; (U66426) transposase [Acidithiobacillus; E=1e-30 pir:A47041; probable transposase - Alcaligenes eutrophus insertion; E=4e-26 PFAM: PF01610; Transposase; E=4.2e-28; transposase 91441 1792461 RB172 Rhodopirellula baltica SH 1 transposase NP_863756.1 90494 D 243090 CDS NP_863757.1 32470764 1790223 91448..91585 1 NC_005027.1 hypothetical protein 91585 1790223 RB174 Rhodopirellula baltica SH 1 hypothetical protein NP_863757.1 91448 D 243090 CDS NP_863758.1 32470765 1790363 91582..91956 1 NC_005027.1 hypothetical protein 91956 1790363 RB175 Rhodopirellula baltica SH 1 hypothetical protein NP_863758.1 91582 D 243090 CDS NP_863759.1 32470766 1796138 complement(92068..92493) 1 NC_005027.1 PMID: 12024217; signal peptide 92493 1796138 RB177 Rhodopirellula baltica SH 1 signal peptide NP_863759.1 92068 R 243090 CDS NP_863760.1 32470767 1795105 complement(92655..93002) 1 NC_005027.1 hypothetical protein 93002 1795105 RB180 Rhodopirellula baltica SH 1 hypothetical protein NP_863760.1 92655 R 243090 CDS NP_863761.1 32470768 1794332 complement(93120..93563) 1 NC_005027.1 hypothetical protein 93563 1794332 RB182 Rhodopirellula baltica SH 1 hypothetical protein NP_863761.1 93120 R 243090 CDS NP_863762.1 32470769 1795618 complement(93532..95316) 1 NC_005027.1 PMID: 12093901 best DB hits: BLAST: gb:AAD51069.1; AF175716_1 (AF175716) immunoreactive 52kD antigen; E=0.045 pir:S75812; hypothetical protein slr1270 - Synechocystis sp. (strain; E=0.17 PFAM: PF02321; Outer membrane efflux protein; E=0.18; hypothetical protein 95316 1795618 RB183 Rhodopirellula baltica SH 1 hypothetical protein NP_863762.1 93532 R 243090 CDS NP_863763.1 32470770 1791706 94207..94812 1 NC_005027.1 hypothetical protein 94812 1791706 RB185 Rhodopirellula baltica SH 1 hypothetical protein NP_863763.1 94207 D 243090 CDS NP_863764.1 32470771 1790207 complement(95367..95474) 1 NC_005027.1 hypothetical protein 95474 1790207 RB187 Rhodopirellula baltica SH 1 hypothetical protein NP_863764.1 95367 R 243090 CDS NP_863765.1 32470772 1791461 95487..96941 1 NC_005027.1 best DB hits: BLAST: pir:T31342; ragD protein - Bradyrhizobium japonicum ----- embl:; E=2e-20 pir:A83330; probable RND efflux membrane fusion protein precursor; E=2e-12 pir:D83099; probable RND efflux membrane fusion protein precursor; E=2e-12 COG: PA2528; COG0845 Membrane-fusion protein; E=2e-13 PFAM: PF00364; Biotin-requiring enzyme; E=0.18 PF00529; HlyD family secretion protein; E=0.05; membrane-fusion protein 96941 1791461 RB188 Rhodopirellula baltica SH 1 membrane-fusion protein NP_863765.1 95487 D 243090 CDS NP_863766.1 32470773 1794814 96941..100087 1 NC_005027.1 PMID: 8407802 best DB hits: BLAST: pir:S76433; cation efflux system protein czcA-2 - Synechocystis sp.; E=2e-86 ddbj:BAB07535.1; (AP001520) cation efflux system [Bacillus; E=1e-82 pir:F82263; probable multidrug resistance protein VC0914 [imported] -; E=1e-76 COG: sll0142; COG0841 Cation/multidrug efflux pump; E=1e-87 PFAM: PF00873; AcrB/AcrD/AcrF family; E=4.7e-88; AcrB/AcrD/AcrF family cation efflux protein 100087 1794814 RB191 Rhodopirellula baltica SH 1 AcrB/AcrD/AcrF family cation efflux protein NP_863766.1 96941 D 243090 CDS NP_863767.1 32470774 1796154 complement(100084..100254) 1 NC_005027.1 hypothetical protein 100254 1796154 RB192 Rhodopirellula baltica SH 1 hypothetical protein NP_863767.1 100084 R 243090 CDS NP_863768.1 32470775 1794120 complement(100235..100909) 1 NC_005027.1 signal peptide 100909 1794120 RB193 Rhodopirellula baltica SH 1 signal peptide NP_863768.1 100235 R 243090 CDS NP_863769.1 32470776 1792897 complement(101008..102708) 1 NC_005027.1 PMID: 3017428 best DB hits: BLAST: pir:D82740; polyphosphate-selective porin O XF0975 [imported] -; E=2e-09 pir:A82820; porin O precursor XF0321 [imported] - Xylella fastidiosa; E=1e-04 swissprot:P05695; PORP_PSEAE PORIN P PRECURSOR (OUTER MEMBRANE; E=9e-04; polyphosphate-selective porin O 102708 oprO 1792897 oprO Rhodopirellula baltica SH 1 polyphosphate-selective porin O NP_863769.1 101008 R 243090 CDS NP_863770.1 32470777 1790450 102804..102965 1 NC_005027.1 hypothetical protein 102965 1790450 RB197 Rhodopirellula baltica SH 1 hypothetical protein NP_863770.1 102804 D 243090 CDS NP_863771.1 32470778 1791308 complement(102935..104761) 1 NC_005027.1 PMID: 2303452 best DB hits: BLAST: gb:AAF49302.1; (AE003522) CG5584 gene product [Drosophila; E=3e-35 gb:AAF49287.1; (AE003522) CG7402 gene product [Drosophila; E=2e-34 gb:AAF30402.1; AF109924_1 (AF109924) sulfatase 1 precursor [Helix; E=1e-33 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=6e-28 BS_yfnI; COG1368 Phosphoglycerol transferase and related proteins,; E=3e-07 VNG0061C; COG3119 Arylsulfatase A and related enzymes; E=2e-04 PFAM: PF00884; Sulfatase; E=1.5e-40; N-acetylgalactosamine-6-sulfatase 104761 1791308 RB198 Rhodopirellula baltica SH 1 N-acetylgalactosamine-6-sulfatase NP_863771.1 102935 R 243090 CDS NP_863772.1 32470779 1789967 complement(104925..106544) 1 NC_005027.1 PMID: 10809675 best DB hits: BLAST: gb:AAF72520.1; AF248951_1 (AF248951) mucin-desulfating sulfatase; E=1e-83 gb:AAG58881.1; AE005599_13 (AE005599) sulfatase; E=3e-31 swissprot:P31447; YIDJ_ECOLI SULFATASE YIDJ -----; E=5e-31 COG: yidJ; COG3119 Arylsulfatase A and related enzymes; E=5e-32 yejM; COG3083 Predicted hydrolase of alkaline phosphatase; E=5e-05 HI1246; COG1368 Phosphoglycerol transferase and related proteins,; E=3e-04 PFAM: PF00884; Sulfatase; E=1.8e-37; mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase) 106544 1789967 RB200 Rhodopirellula baltica SH 1 mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase) NP_863772.1 104925 R 243090 CDS NP_863773.1 32470780 1794289 complement(106781..107647) 1 NC_005027.1 best DB hits: BLAST: swissprot:Q9WYP7; Y416_THEMA HYPOTHETICAL PROTEIN TM0416 -----; E=4e-26 swissprot:O50580; DT3E_PSECI D-TAGATOSE 3-EPIMERASE -----; E=6e-13 swissprot:P73599; YD04_SYNY3 HYPOTHETICAL 32.8 KDA PROTEIN SLL1304; E=2e-12 COG: TM0416; COG1082 Predicted endonucleases; E=4e-27; sugar phosphate isomerase/epimerase 107647 1794289 RB201 Rhodopirellula baltica SH 1 sugar phosphate isomerase/epimerase NP_863773.1 106781 R 243090 CDS NP_863774.1 32470781 1790726 complement(107732..107884) 1 NC_005027.1 PMID: 3097517 best DB hits: BLAST: pir:A24420; notch protein - fruit fly (Drosophila melanogaster); E=0.11 swissprot:P07207; NOTC_DROME NEUROGENIC LOCUS NOTCH PROTEIN; E=0.11 embl:CAB37610.1; (AL035436) EG:140G11.1 [Drosophila melanogaster]; E=0.11; neurogenic locus Notch protein 107884 1790726 RB202 Rhodopirellula baltica SH 1 neurogenic locus Notch protein NP_863774.1 107732 R 243090 CDS NP_863775.1 32470782 1793918 complement(107922..108965) 1 NC_005027.1 PMID: 2498333 best DB hits: BLAST: pir:T04984; hypothetical protein T16L1.160 - Arabidopsis thaliana; E=3e-59 gb:AAF54729.1; (AE003694) CG18547 gene product [Drosophila; E=3e-44 gb:AAF54731.1; (AE003694) CG3397 gene product [Drosophila; E=4e-36 COG: YMR041c; COG0667 Predicted oxidoreductases (related to aryl-alcohol; E=9e-22 TM1183; COG1453 Predicted oxidoreductases of the aldo/keto reductase; E=1e-14 BS_yccK; COG0667 Predicted oxidoreductases (related to aryl-alcohol; E=2e-14 PFAM: PF00248; Aldo/keto reductase; E=1.3e-14; oxidoreductase 108965 1793918 RB203 Rhodopirellula baltica SH 1 oxidoreductase NP_863775.1 107922 R 243090 CDS NP_863776.1 32470783 1793409 complement(109144..109251) 1 NC_005027.1 signal peptide 109251 1793409 RB206 Rhodopirellula baltica SH 1 signal peptide NP_863776.1 109144 R 243090 CDS NP_863777.1 32470784 1796979 complement(109385..111136) 1 NC_005027.1 PMID: 11930014 best DB hits: BLAST: pir:S44243; endosomal protein - human ----- embl: CAA55632.1; E=0.71 gb:AAA79121.1; (L40157) endosome-associated protein [Homo; E=0.73 swissprot:P02566; MYSB_CAEEL MYOSIN HEAVY CHAIN B (MHC B) -----; E=0.82 PFAM: PF01882; Protein of unknown function DUF58; E=0.11; endosomal protein 111136 1796979 RB207 Rhodopirellula baltica SH 1 endosomal protein NP_863777.1 109385 R 243090 CDS NP_863778.1 32470785 1795379 complement(111133..112158) 1 NC_005027.1 hypothetical protein 112158 1795379 RB210 Rhodopirellula baltica SH 1 hypothetical protein NP_863778.1 111133 R 243090 CDS NP_863779.1 32470786 1796115 112302..115646 1 NC_005027.1 signal peptide 115646 1796115 RB213 Rhodopirellula baltica SH 1 signal peptide NP_863779.1 112302 D 243090 CDS NP_863780.1 32470787 1795410 115765..117177 1 NC_005027.1 PMID: 11743194; hypothetical protein 117177 1795410 RB218 Rhodopirellula baltica SH 1 hypothetical protein NP_863780.1 115765 D 243090 CDS NP_863781.1 32470788 1790589 117170..118141 1 NC_005027.1 signal peptide 118141 1790589 RB220 Rhodopirellula baltica SH 1 signal peptide NP_863781.1 117170 D 243090 CDS NP_863782.1 32470789 1795803 complement(118214..118324) 1 NC_005027.1 hypothetical protein 118324 1795803 RB222 Rhodopirellula baltica SH 1 hypothetical protein NP_863782.1 118214 R 243090 CDS NP_863783.1 32470790 1796939 complement(118401..120395) 1 NC_005027.1 PMID: 10438791 best DB hits: BLAST: ddbj:BAB07649.1; (AP001520) BH3930~unknown conserved protein in; E=1e-170 swissprot:Q9Z8L0; Y328_CHLPN HYPOTHETICAL PROTEIN; E=1e-86 swissprot:O84087; Y085_CHLTR HYPOTHETICAL PROTEIN CT085 -----; E=3e-86 COG: BH3930; COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and; E=1e-171 PFAM: PF01977; Protein of unknown function UPF0096; E=6.7e-19; 4-hydroxybenzoate decarboxylase 120395 1796939 RB223 Rhodopirellula baltica SH 1 4-hydroxybenzoate decarboxylase NP_863783.1 118401 R 243090 CDS NP_863784.1 32470791 1795797 complement(120568..120834) 1 NC_005027.1 hypothetical protein 120834 1795797 RB226 Rhodopirellula baltica SH 1 hypothetical protein NP_863784.1 120568 R 243090 CDS NP_863785.1 32470792 1796019 120858..121037 1 NC_005027.1 hypothetical protein 121037 1796019 RB227 Rhodopirellula baltica SH 1 hypothetical protein NP_863785.1 120858 D 243090 CDS NP_863786.1 32470793 1794912 complement(121025..122782) 1 NC_005027.1 signal peptide 122782 1794912 RB229 Rhodopirellula baltica SH 1 signal peptide NP_863786.1 121025 R 243090 CDS NP_863787.1 32470794 1792428 122781..123017 1 NC_005027.1 hypothetical protein 123017 1792428 RB233 Rhodopirellula baltica SH 1 hypothetical protein NP_863787.1 122781 D 243090 CDS NP_863788.1 32470795 1794153 123018..124316 1 NC_005027.1 best DB hits: BLAST: pir:S74628; hypothetical protein slr1772 - Synechocystis sp. (strain; E=6e-17 pir:E82406; probable hydrolase VCA0877 [imported] - Vibrio cholerae; E=4e-13 gb:AAF67801.1; AF148138_1 (AF148138) bile salt hydrolase; E=0.028 COG: slr1772; COG3049 Penicillin V acylase and related amidases; E=5e-18 PFAM: PF02275; Choloylglycine hydrolase; E=0.47; hydrolase 124316 1794153 RB236 Rhodopirellula baltica SH 1 hydrolase NP_863788.1 123018 D 243090 CDS NP_863789.1 32470796 1796564 124403..124546 1 NC_005027.1 hypothetical protein 124546 1796564 RB241 Rhodopirellula baltica SH 1 hypothetical protein NP_863789.1 124403 D 243090 CDS NP_863790.1 32470797 1791890 124632..125636 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 125636 1791890 RB244 Rhodopirellula baltica SH 1 signal peptide NP_863790.1 124632 D 243090 CDS NP_863791.1 32470798 1796192 125688..126200 1 NC_005027.1 best DB hits: PFAM: PF02369; Bacterial Ig-like domain (group 1); E=0.48; signal peptide 126200 1796192 RB246 Rhodopirellula baltica SH 1 signal peptide NP_863791.1 125688 D 243090 CDS NP_863792.1 32470799 1792410 complement(126264..126458) 1 NC_005027.1 hypothetical protein 126458 1792410 RB248 Rhodopirellula baltica SH 1 hypothetical protein NP_863792.1 126264 R 243090 CDS NP_863793.1 32470800 1795989 complement(126492..128021) 1 NC_005027.1 PMID: 10986268 best DB hits: BLAST: swissprot:P03835; YI41_ECOLI INSERTION ELEMENT IS4 HYPOTHETICAL; E=0.002 gb:AAC72261.1; (U91581) transposase [Lactococcus lactis; E=0.008 gb:AAF27554.1; (AF179847) transposase [Lactococcus; E=0.008 COG: yi41; COG3385 Predicted transposase; E=2e-04 PFAM: PF01609; Transposase (IS4 family); E=0.024; transposase 128021 1795989 RB249 Rhodopirellula baltica SH 1 transposase NP_863793.1 126492 R 243090 CDS NP_863794.1 32470801 1795068 127991..128251 1 NC_005027.1 hypothetical protein 128251 1795068 RB250 Rhodopirellula baltica SH 1 hypothetical protein NP_863794.1 127991 D 243090 CDS NP_863795.1 32470802 1793487 complement(128316..129644) 1 NC_005027.1 PMID: 2991272 best DB hits: BLAST: swissprot:P56455; SYH_HELPY HISTIDYL-TRNA SYNTHETASE; E=5e-81 swissprot:Q9ZK27; SYH_HELPJ HISTIDYL-TRNA SYNTHETASE; E=1e-79 swissprot:O83647; SYH_TREPA HISTIDYL-TRNA SYNTHETASE; E=1e-73 COG: HP1190; COG0124 Histidyl-tRNA synthetase; E=5e-82 PFAM: PF00587; tRNA synthetase class II (G, H,; E=3.3e-08; histidyl-tRNA synthetase 129644 hisS 1793487 hisS Rhodopirellula baltica SH 1 histidyl-tRNA synthetase NP_863795.1 128316 R 243090 CDS NP_863796.1 32470803 1790280 complement(129759..130250) 1 NC_005027.1 hypothetical protein 130250 1790280 RB252 Rhodopirellula baltica SH 1 hypothetical protein NP_863796.1 129759 R 243090 CDS NP_863797.1 32470804 1796835 130316..131215 1 NC_005027.1 PMID: 7868604 best DB hits: BLAST: gb:AAG20130.1; (AE005091) formyltetrahydrofolate deformylase; E=5e-24 swissprot:Q55135; PURU_SYNY3 FORMYLTETRAHYDROFOLATE DEFORMYLASE; E=3e-17 pir:C82633; formyltetrahydrofolate deformylase XF1831 [imported] -; E=2e-15 COG: VNG1946G; COG0788 Formyltetrahydrofolate hydrolase; E=5e-25 TM1248; COG0299 Folate-dependent phosphoribosylglycinamide; E=2e-07 Rv2964; COG0788 Formyltetrahydrofolate hydrolase; E=8e-07 PFAM: PF00551; Formyl transferase; E=1.4e-10; formyltetrahydrofolate deformylase 131215 purU 1796835 purU Rhodopirellula baltica SH 1 formyltetrahydrofolate deformylase NP_863797.1 130316 D 243090 CDS NP_863798.1 32470805 1794254 complement(131592..131813) 1 NC_005027.1 hypothetical protein 131813 1794254 RB257 Rhodopirellula baltica SH 1 hypothetical protein NP_863798.1 131592 R 243090 CDS NP_863799.1 32470806 1795216 complement(131782..132336) 1 NC_005027.1 hypothetical protein 132336 1795216 RB259 Rhodopirellula baltica SH 1 hypothetical protein NP_863799.1 131782 R 243090 CDS NP_863800.1 32470807 1796762 132414..132683 1 NC_005027.1 hypothetical protein 132683 1796762 RB262 Rhodopirellula baltica SH 1 hypothetical protein NP_863800.1 132414 D 243090 CDS NP_863801.1 32470808 1791067 132677..132871 1 NC_005027.1 PMID: 11679669 best DB hits: BLAST: swissprot:P49225; RS21_MYXXA 30S RIBOSOMAL PROTEIN S21 -----; E=0.78 PFAM: PF01165; Ribosomal protein S21; E=2.9e-10; 30S ribosomal protein S21 132871 rpsU 1791067 rpsU Rhodopirellula baltica SH 1 30S ribosomal protein S21 NP_863801.1 132677 D 243090 CDS NP_863802.1 32470809 1796605 complement(133252..133707) 1 NC_005027.1 best DB hits: BLAST: pir:H75286; hypothetical protein - Deinococcus radiodurans (strain; E=5e-11 COG: DR2326; COG2314 Predicted membrane protein; E=1e-11; hypothetical protein 133707 1796605 RB268 Rhodopirellula baltica SH 1 hypothetical protein NP_863802.1 133252 R 243090 CDS NP_863803.1 32470810 1791358 complement(133878..134096) 1 NC_005027.1 hypothetical protein 134096 1791358 RB269 Rhodopirellula baltica SH 1 hypothetical protein NP_863803.1 133878 R 243090 CDS NP_863804.1 32470811 1790491 complement(134068..134205) 1 NC_005027.1 hypothetical protein 134205 1790491 RB271 Rhodopirellula baltica SH 1 hypothetical protein NP_863804.1 134068 R 243090 CDS NP_863805.1 32470812 1791525 134180..134296 1 NC_005027.1 hypothetical protein 134296 1791525 RB272 Rhodopirellula baltica SH 1 hypothetical protein NP_863805.1 134180 D 243090 CDS NP_863806.1 32470813 1794255 complement(134462..135280) 1 NC_005027.1 best DB hits: BLAST: embl:CAB94634.1; (AL359215) secreted glycosyl hydrolase.; E=7e-08 pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=1e-07 embl:CAB45032.1; (AL078635) large multi-functional; E=0.002; secreted glycosyl hydrolase 135280 1794255 RB273 Rhodopirellula baltica SH 1 secreted glycosyl hydrolase NP_863806.1 134462 R 243090 CDS NP_863807.1 32470814 1790929 complement(135370..135819) 1 NC_005027.1 hypothetical protein 135819 1790929 RB275 Rhodopirellula baltica SH 1 hypothetical protein NP_863807.1 135370 R 243090 CDS NP_863808.1 32470815 1796948 135460..135786 1 NC_005027.1 hypothetical protein 135786 1796948 RB276 Rhodopirellula baltica SH 1 hypothetical protein NP_863808.1 135460 D 243090 CDS NP_863809.1 32470816 1792397 135837..138587 1 NC_005027.1 hypothetical protein 138587 1792397 RB278 Rhodopirellula baltica SH 1 hypothetical protein NP_863809.1 135837 D 243090 CDS NP_863810.1 32470817 1796975 138584..139510 1 NC_005027.1 best DB hits: BLAST: pir:S74476; ABC-type transport protein slr1113 - Synechocystis sp.; E=5e-49 pir:H71008; probable ATP-binding transport protein - Pyrococcus; E=8e-43 pir:S76626; ABC-type transport protein sll0489 - Synechocystis sp.; E=1e-42 COG: slr1113; COG1131 ABC-type multidrug transport system, ATPase; E=5e-50 yadG; COG1131 ABC-type multidrug transport system, ATPase component; E=1e-34 BH1054_2; COG0842 Permease component of an ABC-transporter; E=1e-34 PFAM: PF02223; Thymidylate kinase; E=0.064 PF00005; ABC transporter; E=2.4e-45; ABC transporter ATP-binding protein 139510 1796975 RB279 Rhodopirellula baltica SH 1 ABC transporter ATP-binding protein NP_863810.1 138584 D 243090 CDS NP_863811.1 32470818 1791579 complement(139488..139634) 1 NC_005027.1 hypothetical protein 139634 1791579 RB280 Rhodopirellula baltica SH 1 hypothetical protein NP_863811.1 139488 R 243090 CDS NP_863812.1 32470819 1796528 complement(139597..139926) 1 NC_005027.1 PMID: 10206714 best DB hits: BLAST: gb:AAA83440.1; (U29483) GroES-like chaperonin [Thermus aquaticus]; E=5e-04 swissprot:P56970; CH10_CAMJE 10 KDA CHAPERONIN (PROTEIN CPN10); E=6e-04 swissprot:P26879; CH10_LEGPN 10 KD CHAPERONIN (PROTEIN CPN10); E=7e-04 COG: Cj1220; COG0234 Co-chaperonin GroES (HSP10); E=6e-05 PFAM: PF00166; Chaperonin 10 Kd subunit; E=4.5e-05; molecular chaperone GroES 139926 groS 1796528 groS Rhodopirellula baltica SH 1 molecular chaperone GroES NP_863812.1 139597 R 243090 CDS NP_863813.1 32470820 1796953 complement(140047..141075) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB03825.1; (AP001507) BH0106~unknown conserved protein; E=2e-52 swissprot:Q06754; YACL_BACSU HYPOTHETICAL 40.9 KD PROTEIN IN; E=4e-51 swissprot:Q48762; YOR6_LISMO HYPOTHETICAL 39.5 KD PROTEIN (ORF6); E=8e-51 COG: BH0106; COG1855 ATPases of the PilT family; E=2e-53 PFAM: PF01850; PIN domain; E=0.11; ATPase 141075 1796953 RB282 Rhodopirellula baltica SH 1 ATPase NP_863813.1 140047 R 243090 CDS NP_863814.1 32470821 1796764 complement(140975..141220) 1 NC_005027.1 hypothetical protein 141220 1796764 RB283 Rhodopirellula baltica SH 1 hypothetical protein NP_863814.1 140975 R 243090 CDS NP_863815.1 32470822 1793789 complement(141290..142468) 1 NC_005027.1 PMID: 2826481 best DB hits: BLAST: gb:AAD53927.1; AF179611_11 (AF179611) dGTP triphosphohydrolase; E=5e-51 swissprot:Q9ZE82; DGTP_RICPR DEOXYGUANOSINETRIPHOSPHATE; E=3e-48 pir:F75449; dGTP triphosphohydrolase-related protein - Deinococcus; E=2e-47 COG: RP064; COG0232 dGTP triphosphohydrolase; E=3e-49 MJ1154; COG1078 HD superfamily phosphohydrolases; E=4e-04 PFAM: PF01966; HD domain; E=2.7e-10; dGTP triphosphohydrolase 142468 dgt 1793789 dgt Rhodopirellula baltica SH 1 dGTP triphosphohydrolase NP_863815.1 141290 R 243090 CDS NP_863816.1 32470823 1796929 complement(142498..142722) 1 NC_005027.1 hypothetical protein 142722 1796929 RB285 Rhodopirellula baltica SH 1 hypothetical protein NP_863816.1 142498 R 243090 CDS NP_863817.1 32470824 1795130 complement(142776..143069) 1 NC_005027.1 hypothetical protein 143069 1795130 RB287 Rhodopirellula baltica SH 1 hypothetical protein NP_863817.1 142776 R 243090 CDS NP_863818.1 32470825 1789928 142779..143096 1 NC_005027.1 hypothetical protein 143096 1789928 RB286 Rhodopirellula baltica SH 1 hypothetical protein NP_863818.1 142779 D 243090 CDS NP_863819.1 32470826 1796932 143024..143932 1 NC_005027.1 best DB hits: BLAST: pir:G75191; dolichol-phosphate mannosyltransferase PAB2307 -; E=3e-21 pir:H71223; probable dolichol-phosphate mannosyltransferase -; E=3e-18 gb:AAC98797.1; (AF007875) dolichol monophosphate mannose synthase; E=5e-13 COG: PAB2307_1; COG0463 Glycosyltransferases involved in cell wall; E=3e-22 yfbF; COG0463 Glycosyltransferases involved in cell wall biogenesis; E=5e-12 MTH136; COG0463 Glycosyltransferases involved in cell wall; E=3e-11 PFAM: PF00535; Glycosyl transferase; E=1.1e-23; dolichol-phosphate mannosyltransferase 143932 1796932 RB289 Rhodopirellula baltica SH 1 dolichol-phosphate mannosyltransferase NP_863819.1 143024 D 243090 CDS NP_863820.1 32470827 1794860 143933..145348 1 NC_005027.1 best DB hits: BLAST: gb:AAG20016.1; (AE005082) Vng1795c [Halobacterium sp. NRC-1]; E=2e-30 gb:AAB89520.1; (AE000983) A. fulgidus predicted coding region; E=2e-21 embl:CAB56041.1; (Y15115) zeta-carotene desaturase [Anabaena; E=4e-05 COG: VNG1795C; COG1232 Protoporphyrinogen oxidase; E=2e-31 slr0940; COG3349 Uncharacterized ACR; E=1e-04 PFAM: PF02254; KTN NAD-binding domain; E=0.00031 PF00070; Pyridine nucleotide-disulphide oxi; E=0.00077 PF01266; D-amino acid oxidase; E=0.11; hypothetical protein 145348 1794860 RB291 Rhodopirellula baltica SH 1 hypothetical protein NP_863820.1 143933 D 243090 CDS NP_863821.1 32470828 1796532 145338..145973 1 NC_005027.1 PMID: 11080634 PMID: 8020507 best DB hits: BLAST: gb:AAG45171.1; AF317883_3 (AF317883) molybdopterin cofactor; E=3e-05 pir:D70864; hypothetical protein Rv2453c - Mycobacterium; E=0.80; molybdopterin-guanine dinucleotide biosynthesis protein MobA 145973 mobA 1796532 mobA Rhodopirellula baltica SH 1 molybdopterin-guanine dinucleotide biosynthesis protein MobA NP_863821.1 145338 D 243090 CDS NP_863822.1 32470829 1796936 145984..147264 1 NC_005027.1 PMID: 9515915 PMID: 3045084 best DB hits: BLAST: gb:AAG55200.1; AE005263_9 (AE005263) molybdopterin biosynthesis; E=7e-40 swissprot:P12281; MOEA_ECOLI MOLYBDOPTERIN BIOSYNTHESIS MOEA; E=3e-39 swissprot:Q44243; MOEA_ANASP MOLYBDOPTERIN BIOSYNTHESIS MOEA; E=4e-34 COG: moeA; COG0303 Molybdopterin biosynthesis enzyme; E=2e-40 PFAM: PF00994; Molybdenum cofactor biosynthesi; E=4.4e-76; molybdopterin biosynthesis protein MoeA 147264 moeA 1796936 moeA Rhodopirellula baltica SH 1 molybdopterin biosynthesis protein MoeA NP_863822.1 145984 D 243090 CDS NP_863823.1 32470830 1795866 complement(147231..147404) 1 NC_005027.1 hypothetical protein 147404 1795866 RB296 Rhodopirellula baltica SH 1 hypothetical protein NP_863823.1 147231 R 243090 CDS NP_863824.1 32470831 1790768 complement(147355..148944) 1 NC_005027.1 best DB hits: BLAST: gb:AAK00343.1; AF329498_3 (AF329498) ammonium transporter AmtB; E=4e-82 gb:AAC38548.1; (AF005275) AmtB [Azospirillum brasilense]; E=3e-81 embl:CAA12410.1; (AJ225126) ammonium transporter, AmtB; E=4e-77 COG: PA5287; COG0004 Ammonia permeases; E=2e-76 PFAM: PF00909; Ammonium Transporter Family; E=1.5e-154; ammonium transporter 148944 amtB 1790768 amtB Rhodopirellula baltica SH 1 ammonium transporter NP_863824.1 147355 R 243090 CDS NP_863825.1 32470832 1790672 complement(148946..149146) 1 NC_005027.1 hypothetical protein 149146 1790672 RB298 Rhodopirellula baltica SH 1 hypothetical protein NP_863825.1 148946 R 243090 CDS NP_863826.1 32470833 1795253 149063..150331 1 NC_005027.1 PMID: 1645840 best DB hits: BLAST: gb:AAK02818.1; (AE006110) HtrA [Pasteurella multocida]; E=0.003 swissprot:P45129; HTOA_HAEIN PROBABLE PERIPLASMIC SERINE PROTEASE; E=0.010 gb:AAC38202.1; (AF018151) HtrA [Haemophilus influenzae]; E=0.010 COG: HI1259; COG0265 Trypsin-like serine proteases, typically; E=0.001 degQ; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=0.009 PFAM: PF00595; PDZ domain (Also known as DHR o; E=5e-11; serine protease HtrA 150331 htrA 1795253 htrA Rhodopirellula baltica SH 1 serine protease HtrA NP_863826.1 149063 D 243090 CDS NP_863827.1 32470834 1795090 150470..151573 1 NC_005027.1 PMID: 2197596 PMID: 9846876 best DB hits: BLAST: gb:AAG58092.1; AE005526_5 (AE005526) adenine glycosylase; G.C -->; E=2e-57 swissprot:P17802; MUTY_ECOLI AG-SPECIFIC ADENINE GLYCOSYLASE; E=3e-57 gb:AAK04939.1; AE006318_2 (AE006318) AG-specific adenine; E=2e-55 COG: mutY; COG1194 A/G-specific DNA glycosylase; E=3e-58 aq_282; COG0177 Predicted EndoIII-related endonuclease; E=2e-16 MTH496; COG1194 A/G-specific DNA glycosylase; E=3e-15 PFAM: PF00730; HhH-GPD superfamily base exci; E=4.5e-42; A/G-specific adenine glycosylase 151573 mutY 1795090 mutY Rhodopirellula baltica SH 1 A/G-specific adenine glycosylase NP_863827.1 150470 D 243090 CDS NP_863828.1 32470835 1796751 151630..151791 1 NC_005027.1 hypothetical protein 151791 1796751 RB303 Rhodopirellula baltica SH 1 hypothetical protein NP_863828.1 151630 D 243090 CDS NP_863829.1 32470836 1791860 151755..153029 1 NC_005027.1 best DB hits: BLAST: pir:B75584; cytochrome-c peroxidase (EC 1.11.1.5) DRA0301; E=2e-45 swissprot:Q49128; MAUG_METEX METHYLAMINE UTILIZATION PROTEIN MAUG; E=9e-45 swissprot:Q50426; MAUG_METFL METHYLAMINE UTILIZATION PROTEIN MAUG; E=2e-42 COG: DRA0301; COG1858 Cytochrome c peroxidase; E=2e-46; cytochrome-c peroxidase 153029 1791860 RB304 Rhodopirellula baltica SH 1 cytochrome-c peroxidase NP_863829.1 151755 D 243090 CDS NP_863830.1 32470837 1793141 153262..153450 1 NC_005027.1 hypothetical protein 153450 1793141 RB306 Rhodopirellula baltica SH 1 hypothetical protein NP_863830.1 153262 D 243090 CDS NP_863831.1 32470838 1791477 complement(153443..154873) 1 NC_005027.1 PMID: 2644282 PMID: 36376 best DB hits: BLAST: swissprot:P16468; MAOX_BACST NAD-DEPENDENT MALIC ENZYME (NAD-ME); E=1e-141 embl:CAB72197.1; (AL138851) malate oxidoreductase; E=1e-135 pir:S74511; malic enzyme - Synechocystis sp. (strain PCC 6803); E=1e-118 COG: slr0721; COG0281 Malic enzyme; E=1e-119 PFAM: PF01842; ACT domain; E=7.3e-05 PF00390; Malic enzyme; E=0.034 PF01488; Shikimate / quinate 5-dehydrogen; E=0.17; NAD-dependent malic enzyme 154873 1791477 RB307 Rhodopirellula baltica SH 1 NAD-dependent malic enzyme NP_863831.1 153443 R 243090 CDS NP_863832.1 32470839 1795793 complement(154993..156441) 1 NC_005027.1 PMID: 8663186 best DB hits: BLAST: pir:G75255; probable magnesium protoporphyrin chelatase -; E=3e-84 pir:D70717; hypothetical protein Rv0958 - Mycobacterium tuberculosis; E=4e-69 gb:AAF82071.1; AF232750_3 (AF232750) Rv0958-like protein; E=2e-25 COG: DR2594; COG1239 Mg-chelatase subunit ChlI; E=2e-85 PFAM: PF01078; Magnesium chelatase, subunit Chl; E=1.1e-12; magnesium protoporphyrin chelatase 156441 chlI 1795793 chlI Rhodopirellula baltica SH 1 magnesium protoporphyrin chelatase NP_863832.1 154993 R 243090 CDS NP_863833.1 32470840 1795991 complement(156664..156945) 1 NC_005027.1 hypothetical protein 156945 1795991 RB313 Rhodopirellula baltica SH 1 hypothetical protein NP_863833.1 156664 R 243090 CDS NP_863834.1 32470841 1792121 156968..157897 1 NC_005027.1 PMID: 1339356 PMID: 7768883 best DB hits: BLAST: embl:CAB45522.1; (AJ007046) [acyl-carrier protein]; E=9e-58 pir:T00580; probable [acyl-carrier-protein] S-malonyltransferase (EC; E=1e-57 gb:AAG43518.1; AF210698_1 (AF210698) malonyl-CoA:ACP transacylase; E=1e-56 COG: HI0156; COG0331 (acyl-carrier-protein) S-malonyltransferase; E=6e-52 PFAM: PF00698; Acyl transferase domain; E=3.2e-16; malonyl CoA-ACP transacylase 157897 fabD 1792121 fabD Rhodopirellula baltica SH 1 malonyl CoA-ACP transacylase NP_863834.1 156968 D 243090 CDS NP_863835.1 32470842 1790802 158031..158789 1 NC_005027.1 PMID: 1556094 PMID: 8759840 best DB hits: BLAST: ddbj:BAB06210.1; (AP001515) 3-oxoacyl-(acyl-carrier protein); E=3e-52 swissprot:Q9X248; FABG_THEMA 3-OXOACYL-[ACYL-CARRIER PROTEIN]; E=7e-50 pir:G75333; 3-oxoacyl-acyl carrier protein reductase - Deinococcus; E=1e-49 COG: BH2491; COG1028 Dehydrogenases with different specificities (related; E=3e-53 BS_fabG; COG1028 Dehydrogenases with different specificities; E=1e-49 RP762; COG1028 Dehydrogenases with different specificities (related; E=7e-48 PFAM: PF00106; short chain dehydrogenase; E=3.2e-73 PF00678; Short chain dehydrogenase/reduct; E=9.9e-16; 3-oxoacyl-ACP reductase 158789 fabG 1790802 fabG Rhodopirellula baltica SH 1 3-oxoacyl-ACP reductase NP_863835.1 158031 D 243090 CDS NP_863836.1 32470843 1790922 158928..159173 1 NC_005027.1 PMID: 1556094 PMID: 2091027 best DB hits: BLAST: gb:AAC63956.1; (AF038925) acyl carrier protein precursor; E=2e-16 pir:E82128; acyl carrier protein VC2020 [imported] - Vibrio cholerae; E=1e-13 pir:F75333; acyl carrier protein DR1942 [similarity] - Deinococcus; E=3e-13 COG: VC2020; COG0236 Acyl carrier protein; E=1e-14 PFAM: PF00550; Phosphopantetheine attachment site; E=2.2e-19; acyl carrier protein 159173 acpP 1790922 acpP Rhodopirellula baltica SH 1 acyl carrier protein NP_863836.1 158928 D 243090 CDS NP_863837.1 32470844 1796934 159334..159621 1 NC_005027.1 hypothetical protein 159621 1796934 RB319 Rhodopirellula baltica SH 1 hypothetical protein NP_863837.1 159334 D 243090 CDS NP_863838.1 32470845 1791701 159618..160907 1 NC_005027.1 PMID: 7972002 best DB hits: BLAST: pir:G69842; 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); E=1e-105 pir:T12022; 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); E=1e-103 pir:S77464; 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); E=1e-103 COG: BS_yjaY; COG0304 3-oxoacyl-(acyl-carrier-protein) synthase I; E=1e-106 PFAM: PF00896; Phosphorylase 2; E=0.27 PF00108; Thiolase, N-terminal domain; E=0.071 PF00109; Beta-ketoacyl synthase, N-ter; E=1e-78; 3-oxoacyl-ACP synthase 160907 fabF 1791701 fabF Rhodopirellula baltica SH 1 3-oxoacyl-ACP synthase NP_863838.1 159618 D 243090 CDS NP_863839.1 32470846 1790777 160852..161607 1 NC_005027.1 PMID: 9741082 best DB hits: BLAST: embl:CAA05049.1; (AJ001848) TDIR [Thauera aromatica]; E=8e-28 gb:AAD12186.1; (U57900) DNA binding protein TutB1; E=1e-24 gb:AAK00179.1; AF222754_7 (AF222754) probable nodulation protein; E=4e-24 COG: PA4196; COG2197 Response regulators consisting of a CheY-like; E=3e-22 PA5511; COG2204 AAA superfamily ATPases with N-terminal receiver; E=1e-15 uvrY; COG2197 Response regulators consisting of a CheY-like receiver; E=2e-10 PFAM: PF00072; Response regulator receiver doma; E=5.1e-23 PF00196; Bacterial regulatory proteins, l; E=5.1e-10; response regulator 161607 1790777 RB321 Rhodopirellula baltica SH 1 response regulator NP_863839.1 160852 D 243090 CDS NP_863840.1 32470847 1793641 complement(161698..162702) 1 NC_005027.1 PMID: 9925549 best DB hits: BLAST: ddbj:BAA34299.1; (AB015853) MexX [Pseudomonas aeruginosa]; E=5e-05 pir:E82263; conserved hypothetical protein VC0913 [imported] -; E=5e-05 pir:A83342; conserved hypothetical protein PA2430 [imported] -; E=5e-05 COG: VC0913; COG0845 Membrane-fusion protein; E=4e-06 PA2430; COG1566 Multidrug resistance efflux pump; E=5e-06 PA2019; COG0845 Membrane-fusion protein; E=1e-05 PFAM: PF00364; Biotin-requiring enzyme; E=0.46 PF00529; HlyD family secretion protein; E=0.0014; multidrug efflux pump 162702 1793641 RB322 Rhodopirellula baltica SH 1 multidrug efflux pump NP_863840.1 161698 R 243090 CDS NP_863841.1 32470848 1790084 162731..162880 1 NC_005027.1 hypothetical protein 162880 1790084 RB324 Rhodopirellula baltica SH 1 hypothetical protein NP_863841.1 162731 D 243090 CDS NP_863842.1 32470849 1794051 162916..163155 1 NC_005027.1 hypothetical protein 163155 1794051 RB327 Rhodopirellula baltica SH 1 hypothetical protein NP_863842.1 162916 D 243090 CDS NP_863843.1 32470850 1792142 complement(163156..163788) 1 NC_005027.1 PMID: 6207018 PMID: 1709162 best DB hits: BLAST: pir:B70464; probable orotate phosphoribosyltransferase (EC 2.4.2.10); E=3e-31 pir:S76099; probable orotate phosphoribosyltransferase (EC 2.4.2.10); E=7e-27 pir:A70834; probable orotate phosphoribosyltransferase (EC 2.4.2.10); E=1e-26 COG: aq_1907; COG0461 Orotate phosphoribosyltransferase; E=3e-32 MJ1655; COG0503 Adenine/guanine phosphoribosyltransferases and; E=3e-05 HI0272; COG0461 Orotate phosphoribosyltransferase; E=3e-05 PFAM: PF00156; Phosphoribosyl transferase domai; E=7e-27; orotate phosphoribosyltransferase 163788 pyrE 1792142 pyrE Rhodopirellula baltica SH 1 orotate phosphoribosyltransferase NP_863843.1 163156 R 243090 CDS NP_863844.1 32470851 1796531 163877..165901 1 NC_005027.1 hypothetical protein 165901 1796531 RB331 Rhodopirellula baltica SH 1 hypothetical protein NP_863844.1 163877 D 243090 CDS NP_863845.1 32470852 1795692 166018..168441 1 NC_005027.1 PMID: 8490659 best DB hits: BLAST: gb:AAD11750.1; (AF067954) cation transporting P-type; E=0.0 swissprot:Q9X5V3; ATCU_RHILV COPPER-TRANSPORTING ATPASE -----; E=0.0 embl:CAC07984.1; (AJ278983) CopF Cu-ATPase [Ralstonia; E=1e-180 COG: sll1920; COG2217 Cation transport ATPases; E=1e-150 PFAM: PF00122; E1-E2 ATPase; E=1.8e-93 PF00702; haloacid dehalogenase-like hyd; E=1.8e-32; copper-transporting ATPase 168441 1795692 RB334 Rhodopirellula baltica SH 1 copper-transporting ATPase NP_863845.1 166018 D 243090 CDS NP_863846.1 32470853 1794097 complement(168385..168642) 1 NC_005027.1 hypothetical protein 168642 1794097 RB335 Rhodopirellula baltica SH 1 hypothetical protein NP_863846.1 168385 R 243090 CDS NP_863847.1 32470854 1796926 complement(168676..169191) 1 NC_005027.1 hypothetical protein 169191 1796926 RB336 Rhodopirellula baltica SH 1 hypothetical protein NP_863847.1 168676 R 243090 CDS NP_863848.1 32470855 1792910 169241..169534 1 NC_005027.1 hypothetical protein 169534 1792910 RB337 Rhodopirellula baltica SH 1 hypothetical protein NP_863848.1 169241 D 243090 CDS NP_863849.1 32470856 1796536 complement(169531..169830) 1 NC_005027.1 best DB hits: BLAST: swissprot:P72699; Y230_SYNY3 HYPOTHETICAL 13.3 KD PROTEIN SLL0230; E=9e-37 prf:2118405D; ORF YBL0105 [Saccharomyces cerevisiae]; E=8e-16 pir:D75018; hypothetical protein PAB1240 - Pyrococcus abyssi; E=1e-12 COG: sll0230; COG0011 Uncharacterized ACR; E=9e-38 PFAM: PF01910; Protein of unknown function DUF77; E=3.4e-51; hypothetical protein 169830 1796536 RB339 Rhodopirellula baltica SH 1 hypothetical protein NP_863849.1 169531 R 243090 CDS NP_863850.1 32470857 1792232 169852..170124 1 NC_005027.1 hypothetical protein 170124 1792232 RB341 Rhodopirellula baltica SH 1 hypothetical protein NP_863850.1 169852 D 243090 CDS NP_863851.1 32470858 1794575 170094..170666 1 NC_005027.1 PMID: 8703024 best DB hits: BLAST: swissprot:O08437; FKBA_AERHY FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS; E=4e-22 pir:H83238; probable peptidyl-prolyl cis-trans isomerase, FkbP-type; E=2e-21 pir:D82331; peptidyl-prolyl cis-trans isomerase, FKBP-type VC0354; E=2e-21 COG: PA3262; COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1; E=2e-22 PFAM: PF00254; FKBP-type peptidyl-prolyl cis-trans; E=1.3e-29; FKBP-type peptidylprolyl isomerase 170666 fkpA 1794575 fkpA Rhodopirellula baltica SH 1 FKBP-type peptidylprolyl isomerase NP_863851.1 170094 D 243090 CDS NP_863852.1 32470859 1795840 complement(170782..171516) 1 NC_005027.1 PMID: 8572946 best DB hits: BLAST: gb:AAA96808.1; (L41843) ORF910; [Bacteriophage mv4]; E=0.002; hypothetical protein 171516 1795840 RB343 Rhodopirellula baltica SH 1 hypothetical protein NP_863852.1 170782 R 243090 CDS NP_863853.1 32470860 1796503 complement(171693..173795) 1 NC_005027.1 PMID: 11157235 PMID: 10966413 best DB hits: BLAST: ddbj:BAB21059.1; (AB037178) xanthan lyase [Bacillus sp. GL1]; E=3e-13 gb:AAG24953.1; AF242413_1 (AF242413) XalA [Paenibacillus; E=2e-10 gb:AAG42262.1; AF318176_1 (AF318176) xanthan lyase XalB; E=0.050 PFAM: PF00070; Pyridine nucleotide-disulphide; E=0.00077; xanthan lyase 173795 1796503 RB344 Rhodopirellula baltica SH 1 xanthan lyase NP_863853.1 171693 R 243090 CDS NP_863854.1 32470861 1795232 complement(173846..174388) 1 NC_005027.1 PMID: 791660310884354 best DB hits: BLAST: pir:S75307; ferredoxin [2Fe-2S] sll1584 [similarity] - Synechocystis; E=2e-29 swissprot:O66511; FER2_AQUAE FERREDOXIN, 2FE-2S (AAFD4) -----; E=3e-08 pdb:1F37; A Chain A, Structure Of A Thioredoxin-Like [2fe-2s]; E=3e-08 COG: sll1584; COG3411 Uncharacterized protein; E=2e-30 TM0010_1; COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51; E=8e-09 aq_108a; COG3411 Uncharacterized protein; E=8e-09; (2Fe-2S) ferredoxin 174388 1795232 RB347 Rhodopirellula baltica SH 1 (2Fe-2S) ferredoxin NP_863854.1 173846 R 243090 CDS NP_863855.1 32470862 1790158 complement(174256..175818) 1 NC_005027.1 PMID: 2303452 best DB hits: BLAST: gb:AAF49287.1; (AE003522) CG7402 gene product [Drosophila; E=4e-41 gb:AAF30402.1; AF109924_1 (AF109924) sulfatase 1 precursor [Helix; E=2e-39 swissprot:P15848; ARSB_HUMAN ARYLSULFATASE B PRECURSOR (ASB); E=6e-38 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=2e-36 PFAM: PF00884; Sulfatase; E=1.4e-48; arylsulfatase 175818 1790158 RB348 Rhodopirellula baltica SH 1 arylsulfatase NP_863855.1 174256 R 243090 CDS NP_863856.1 32470863 1793926 175963..177417 1 NC_005027.1 PMID: 7910580 PMID: 2303452 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=2e-32 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=5e-32 gb:AAA51779.1; (M32373) arylsulfatase B precursor [Homo sapiens]; E=7e-32 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=4e-21 PFAM: PF00884; Sulfatase; E=5.6e-75; arylsulfatase 177417 1793926 RB352 Rhodopirellula baltica SH 1 arylsulfatase NP_863856.1 175963 D 243090 CDS NP_863857.1 32470864 1794990 complement(177380..177535) 1 NC_005027.1 hypothetical protein 177535 1794990 RB354 Rhodopirellula baltica SH 1 hypothetical protein NP_863857.1 177380 R 243090 CDS NP_863858.1 32470865 1796501 177713..178822 1 NC_005027.1 hypothetical protein 178822 1796501 RB356 Rhodopirellula baltica SH 1 hypothetical protein NP_863858.1 177713 D 243090 CDS NP_863859.1 32470866 1796232 complement(178844..179599) 1 NC_005027.1 PMID: 9045837 PMID: 9139683 best DB hits: BLAST: swissprot:O86169; MENH_BACST 2-HEPTAPRENYL-1,4-NAPHTHOQUINONE; E=1e-11 prf:2104259J; ORF 5 [Streptomyces peucetius]; E=3e-09 gb:AAG54506.1; AE005196_4 (AE005196) unknown [Escherichia coli; E=7e-08 COG: DR0026; COG0500 SAM-dependent methyltransferases; E=2e-07 PA5063; COG2226 Methylase involved in ubiquinone/menaquinone; E=3e-07 aq_262; COG0500 SAM-dependent methyltransferases; E=1e-05 PFAM: PF01209; ubiE/COQ5 methyltransferase f; E=0.0065; ubiquinone/menaquinone biosynthesis methyltransferase 179599 ubiE 1796232 ubiE Rhodopirellula baltica SH 1 ubiquinone/menaquinone biosynthesis methyltransferase NP_863859.1 178844 R 243090 CDS NP_863860.1 32470867 1790522 complement(179596..180843) 1 NC_005027.1 PMID: 11214968; hypothetical protein 180843 1790522 RB360 Rhodopirellula baltica SH 1 hypothetical protein NP_863860.1 179596 R 243090 CDS NP_863861.1 32470868 1791865 complement(180893..181831) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:G83242; hypothetical protein PA3219 [imported] - Pseudomonas; E=9e-45 pir:D83421; conserved hypothetical protein PA1792 [imported] -; E=0.024 pir:C82150; conserved hypothetical protein VC1850 [imported] -; E=0.030 COG: PA3219; COG2908 Uncharacterized BCR; E=8e-46; hypothetical protein 181831 1791865 RB362 Rhodopirellula baltica SH 1 hypothetical protein NP_863861.1 180893 R 243090 CDS NP_863862.1 32470869 1791969 181855..182100 1 NC_005027.1 hypothetical protein 182100 1791969 RB363 Rhodopirellula baltica SH 1 hypothetical protein NP_863862.1 181855 D 243090 CDS NP_863863.1 32470870 1795892 complement(182117..183754) 1 NC_005027.1 PMID: 11259647; signal peptide 183754 1795892 RB365 Rhodopirellula baltica SH 1 signal peptide NP_863863.1 182117 R 243090 CDS NP_863864.1 32470871 1789894 complement(183721..183924) 1 NC_005027.1 hypothetical protein 183924 1789894 RB367 Rhodopirellula baltica SH 1 hypothetical protein NP_863864.1 183721 R 243090 CDS NP_863865.1 32470872 1790428 183951..184247 1 NC_005027.1 hypothetical protein 184247 1790428 RB368 Rhodopirellula baltica SH 1 hypothetical protein NP_863865.1 183951 D 243090 CDS NP_863866.1 32470873 1792055 complement(184244..184384) 1 NC_005027.1 hypothetical protein 184384 1792055 RB369 Rhodopirellula baltica SH 1 hypothetical protein NP_863866.1 184244 R 243090 CDS NP_863867.1 32470874 1791024 184428..186089 1 NC_005027.1 PMID: 9495773 PMID: 8437564 best DB hits: BLAST: swissprot:P73450; NRTC_SYNY3 NITRATE TRANSPORT ATP-BINDING PROTEIN; E=3e-61 gb:AAB86900.1; (L27431) nitrate transporter component; NasF; E=2e-51 pir:S75959; nitrate transport protein C-1 - Synechocystis sp.; E=6e-49 COG: sll1452_2; COG0715 ABC-type nitrate/sulfonate/taurine/bicarbonate; E=3e-62; nitrate transport ATP-binding protein 186089 nrtC 1791024 nrtC Rhodopirellula baltica SH 1 nitrate transport ATP-binding protein NP_863867.1 184428 D 243090 CDS NP_863868.1 32470875 1797016 186173..187288 1 NC_005027.1 PMID: 8437564 best DB hits: BLAST: ddbj:BAA21794.1; (AB000100) intrinsic membrane protein; E=6e-30 swissprot:P38044; NRTB_SYNP7 NITRATE TRANSPORT PERMEase; E=4e-29 gb:AAB86903.1; (L27431) nitrate transporter component; NasE; E=1e-27 COG: sll1451; COG0600 ABC-type nitrate/sulfonate/taurine/bicarbonate; E=9e-28 BB0145; COG1174 ABC-type proline/glycine betaine transport systems,; E=1e-05 PFAM: PF00528; Binding-protein-dependent transpor; E=8.5e-12; nitrate transport permease 187288 nrtB 1797016 nrtB Rhodopirellula baltica SH 1 nitrate transport permease NP_863868.1 186173 D 243090 CDS NP_863869.1 32470876 1792853 187285..188283 1 NC_005027.1 PMID: 8437564 best DB hits: BLAST: pir:S58789; ATP binding protein nrtC - oscillatoriacean; E=4e-60 swissprot:P38045; NRTC_SYNP7 NITRATE TRANSPORT ATP-BINDING PROTEIN; E=2e-59 pir:S75959; nitrate transport protein C-1 - Synechocystis sp.; E=9e-59 COG: sll1453; COG1116 ABC-type nitrate/sulfonate/taurine/bicarbonate; E=6e-59 NMB0610; COG1130 ABC-type sugar/spermidine/putrescine transport; E=1e-35 PA2308; COG1116 ABC-type nitrate/sulfonate/taurine/bicarbonate; E=2e-35 PFAM: PF00485; Phosphoribulokinase / Uridine kinase; E=0.18 PF00005; ABC transporter; E=2.2e-56; nitrate transport ATP-binding protein 188283 nrtC 1792853 nrtC Rhodopirellula baltica SH 1 nitrate transport ATP-binding protein NP_863869.1 187285 D 243090 CDS NP_863870.1 32470877 1791282 188377..189222 1 NC_005027.1 PMID: 8437564 best DB hits: BLAST: pir:S75959; nitrate transport protein C-1 - Synechocystis sp.; E=1e-61 pir:S58789; ATP binding protein nrtC - oscillatoriacean; E=1e-61 pir:S77386; nitrate transport protein D-3 - Synechocystis sp.; E=2e-61 COG: sll1453; COG1116 ABC-type nitrate/sulfonate/taurine/bicarbonate; E=2e-62 PA3254; COG1130 ABC-type sugar/spermidine/putrescine transport; E=4e-29 PA2329; COG1116 ABC-type nitrate/sulfonate/taurine/bicarbonate; E=4e-28 PFAM: PF00005; ABC transporter; E=3.5e-57; nitrate transport ATP-binding protein 189222 nrtD 1791282 nrtD Rhodopirellula baltica SH 1 nitrate transport ATP-binding protein NP_863870.1 188377 D 243090 CDS NP_863871.1 32470878 1791976 189235..190170 1 NC_005027.1 best DB hits: PFAM: PF01590; GAF domain; E=0.89; hypothetical protein 190170 1791976 RB375 Rhodopirellula baltica SH 1 hypothetical protein NP_863871.1 189235 D 243090 CDS NP_863872.1 32470879 1795641 190095..191966 1 NC_005027.1 PMID: 8635740 PMID: 1834669 best DB hits: BLAST: embl:CAC23825.1; (AL512979) molybdopterin oxidoreductase, iron; E=5e-26 gb:AAD37318.1; AF135170_9 (AF135170) dimethyl sulfoxide reductase; E=2e-25 swissprot:P18776; DMSB_ECOLI ANAEROBIC DIMETHYL SULFOXIDE; E=5e-25 COG: dmsB; COG0437 Fe-S-cluster-containing hydrogenase components 1; E=4e-26 TM0396; COG1142 Fe-S-cluster-containing hydrogenase components 2; E=5e-16 aq_067; COG0437 Fe-S-cluster-containing hydrogenase components 1; E=6e-16 PFAM: PF00037; 4Fe-4S binding domain; E=0.026; molybdopterin oxidoreductase, iron sulfur subunit 191966 1795641 RB377 Rhodopirellula baltica SH 1 molybdopterin oxidoreductase, iron sulfur subunit NP_863872.1 190095 D 243090 CDS NP_863873.1 32470880 1794355 191963..194224 1 NC_005027.1 PMID: 7868621 best DB hits: BLAST: ddbj:BAA74791.1; (AB017192) nitrate reductase catalytic subunit; E=1e-156 gb:AAB40292.1; (L49163) narB [Nostoc sp. PCC 7120]; E=1e-105 swissprot:P73448; NARB_SYNY3 NITRATE REDUCTASE ----- pir:; E=1e-105 COG: sll1454; COG0243 Anaerobic dehydrogenases, typically; E=1e-106 MTH1552; COG3383 Uncharacterized anaerobic dehydrogenase; E=5e-74 aq_217; COG0243 Anaerobic dehydrogenases, typically; E=4e-69 PFAM: PF00384; Molybdopterin oxidoreductases; E=1.2e-89 PF01568; Molydopterin dinucleotide bin; E=5.9e-29; nitrate reductase catalytic subunit 194224 narB 1794355 narB Rhodopirellula baltica SH 1 nitrate reductase catalytic subunit NP_863873.1 191963 D 243090 CDS NP_863874.1 32470881 1794753 194217..196058 1 NC_005027.1 ferredoxin-dependent assimilatory nitrite reductase; ferredoxin-nitrite reductase 196058 nirA 1794753 nirA Rhodopirellula baltica SH 1 ferredoxin-nitrite reductase NP_863874.1 194217 D 243090 CDS NP_863875.1 32470882 1794411 196136..197740 1 NC_005027.1 Catalyzes the reduction of sulfite to sulfide, an essential step in the anaerobic sulfate-respiration pathway; sulfite reductase 197740 cysJ 1794411 cysJ Rhodopirellula baltica SH 1 sulfite reductase NP_863875.1 196136 D 243090 CDS NP_863876.1 32470883 1791483 197737..197862 1 NC_005027.1 hypothetical protein 197862 1791483 RB381 Rhodopirellula baltica SH 1 hypothetical protein NP_863876.1 197737 D 243090 CDS NP_863877.1 32470884 1791710 197889..198533 1 NC_005027.1 hypothetical protein 198533 1791710 RB382 Rhodopirellula baltica SH 1 hypothetical protein NP_863877.1 197889 D 243090 CDS NP_863878.1 32470885 1795990 complement(198058..198732) 1 NC_005027.1 hypothetical protein 198732 1795990 RB383 Rhodopirellula baltica SH 1 hypothetical protein NP_863878.1 198058 R 243090 CDS NP_863879.1 32470886 1793318 complement(198704..199000) 1 NC_005027.1 PMID: 9915792 best DB hits: BLAST: swissprot:Q9I778; KPTA_PSEAE PROBABLE RNA 2'-PHOSPHOTRANSFERASE; E=3e-10 pir:S56556; hypothetical 24.6K protein (iadA-mcrD intergenic region); E=6e-09 swissprot:P39380; KPTA_ECOLI RNA 2'-PHOSPHOTRANSFERASE; E=6e-09 COG: PA0054; COG1859 Uncharacterized ACR; E=3e-11 PFAM: PF01885; Domain of unknown function DUF60; E=6.1e-16; RNA 2-phosphotransferase 199000 kptA 1793318 kptA Rhodopirellula baltica SH 1 RNA 2-phosphotransferase NP_863879.1 198704 R 243090 CDS NP_863880.1 32470887 1794262 complement(199036..202650) 1 NC_005027.1 PMID: 8936303 best DB hits: BLAST: pir:T18551; saframycin Mx1 synthetase B - Myxococcus xanthus -----; E=1e-112 pir:T34918; polyketide synthase - Streptomyces coelicolor -----; E=1e-102 pir:H83343; probable non-ribosomal peptide synthetase PA2424; E=1e-101 COG: PA2424_1; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid; E=1e-102 Rv1529; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases; E=7e-83 Ta1189; COG0156 7-keto-8-aminopelargonate synthetase and related; E=6e-62 PFAM: PF00501; AMP-binding enzyme; E=2.2e-08 PF00550; Phosphopantetheine attachment si; E=1.3e-09 PF02490; Aminolevulinic acid synthase dom; E=0.0015; saframycin Mx1 synthetase B 202650 1794262 RB386 Rhodopirellula baltica SH 1 saframycin Mx1 synthetase B NP_863880.1 199036 R 243090 CDS NP_863881.1 32470888 1794889 202649..202828 1 NC_005027.1 hypothetical protein 202828 1794889 RB388 Rhodopirellula baltica SH 1 hypothetical protein NP_863881.1 202649 D 243090 CDS NP_863882.1 32470889 1795406 202881..204269 1 NC_005027.1 PMID: 10094695 best DB hits: BLAST: gb:AAG38844.1; (AY010120) reductasehalogenase; E=9e-35 pir:T30590; alkylhalidase homolog - Amycolatopsis orientalis -----; E=2e-29 pir:T17419; probable alkylhalidase (EC 3.8.1.1) pltA - Pseudomonas; E=7e-29 COG: aq_104; COG0644 Dehydrogenases (flavoproteins); E=2e-07 PFAM: PF01134; Glucose inhibited division prot; E=0.14 PF02254; KTN NAD-binding domain; E=0.15 PF01494; FAD binding domain; E=0.00011; alkylhalidase 204269 1795406 RB390 Rhodopirellula baltica SH 1 alkylhalidase NP_863882.1 202881 D 243090 CDS NP_863883.1 32470890 1796563 204269..204925 1 NC_005027.1 PMID: 7826004 best DB hits: BLAST: swissprot:P77475; YQAB_ECOLI HYPOTHETICAL 20.8 KDA PROTEIN IN; E=7e-26 gb:AAG57799.1; AE005497_10 (AE005497) phosphatase; E=8e-26 pir:D82431; CbbY family protein VCA0662 [imported] - Vibrio cholerae; E=1e-25 COG: yqaB; COG0637 Predicted phosphatase/phosphohexomutase; E=7e-27 DR0729; COG0546 Predicted phosphatases; E=1e-09 yieH; COG0637 Predicted phosphatase/phosphohexomutase; E=9e-09 PFAM: PF00702; haloacid dehalogenase-like hydro; E=8.5e-24; phosphatase 204925 1796563 RB392 Rhodopirellula baltica SH 1 phosphatase NP_863883.1 204269 D 243090 CDS NP_863884.1 32470891 1790557 complement(205043..207007) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB09011.1; (AB012239) gene_id:K11J9.20~unknown protein; E=0.11 pir:T35304; probable peptidase - Streptomyces coelicolor -----; E=0.19 ddbj:BAA76932.1; (AB024705) fls485 [Homo sapiens]; E=0.83; peptidase 207007 1790557 RB393 Rhodopirellula baltica SH 1 peptidase NP_863884.1 205043 R 243090 CDS NP_863885.1 32470892 1792662 complement(207055..207192) 1 NC_005027.1 hypothetical protein 207192 1792662 RB394 Rhodopirellula baltica SH 1 hypothetical protein NP_863885.1 207055 R 243090 CDS NP_863886.1 32470893 1794691 207191..209692 1 NC_005027.1 signal peptide 209692 1794691 RB395 Rhodopirellula baltica SH 1 signal peptide NP_863886.1 207191 D 243090 CDS NP_863887.1 32470894 1796124 209745..211058 1 NC_005027.1 signal peptide 211058 1796124 RB398 Rhodopirellula baltica SH 1 signal peptide NP_863887.1 209745 D 243090 CDS NP_863888.1 32470895 1791219 complement(211175..212728) 1 NC_005027.1 PMID: 2549364 best DB hits: BLAST: swissprot:P80860; G6PI_BACSU GLUCOSE-6-PHOSPHATE ISOMERASE (GPI); E=6e-53 ddbj:BAB07062.1; (AP001518) glucose-6-phosphate isomerase; E=4e-52 pir:S15937; glucose-6-phosphate isomerase (EC 5.3.1.9) - Bacillus; E=5e-52 COG: BS_pgi; COG0166 Glucose-6-phosphate isomerase; E=6e-54 PFAM: PF00342; Phosphoglucose isomerase; E=6.8e-31; glucose-6-phosphate isomerase 212728 pgi 1791219 pgi Rhodopirellula baltica SH 1 glucose-6-phosphate isomerase NP_863888.1 211175 R 243090 CDS NP_863889.1 32470896 1791837 212820..213275 1 NC_005027.1 hypothetical protein 213275 1791837 RB402 Rhodopirellula baltica SH 1 hypothetical protein NP_863889.1 212820 D 243090 CDS NP_863890.1 32470897 1796094 complement(213284..215665) 1 NC_005027.1 best DB hits: PFAM: PF01423; Sm protein; E=0.11; hypothetical protein 215665 1796094 RB404 Rhodopirellula baltica SH 1 hypothetical protein NP_863890.1 213284 R 243090 CDS NP_863891.1 32470898 1797044 complement(215823..217496) 1 NC_005027.1 PMID: 10809675 best DB hits: BLAST: gb:AAF72520.1; AF248951_1 (AF248951) mucin-desulfating sulfatase; E=4e-37 pir:F83354; probable sulfatase PA2333 [imported] - Pseudomonas; E=2e-19 gb:AAF55296.1; (AE003712) Sulf1 gene product [Drosophila; E=2e-18 COG: PA2333; COG3119 Arylsulfatase A and related enzymes; E=1e-20 yejM; COG3083 Predicted hydrolase of alkaline phosphatase; E=7e-04 BS_yfnI; COG1368 Phosphoglycerol transferase and related proteins,; E=0.001 PFAM: PF00325; Bacterial regulatory proteins, crp; E=0.29 PF00884; Sulfatase; E=4.3e-51; mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase) 217496 1797044 RB406 Rhodopirellula baltica SH 1 mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase) NP_863891.1 215823 R 243090 CDS NP_863892.1 32470899 1793392 217387..218925 1 NC_005027.1 PMID: 7910580 best DB hits: BLAST: swissprot:P50428; ARSA_MOUSE ARYLSULFATASE A PRECURSOR (ASA); E=2e-38 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=7e-38 gb:AAC27821.1; (AF013158) arylsulfatase [Heliocidaris; E=1e-37 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=2e-25 yejM; COG3083 Predicted hydrolase of alkaline phosphatase; E=1e-05 Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=3e-05 PFAM: PF00884; Sulfatase; E=1.5e-38 PF00391; PEP-utilizing enzyme, mobile do; E=0.65 PF00884; Sulfatase; E=4.6e-44; arylsulfatase 218925 1793392 RB409 Rhodopirellula baltica SH 1 arylsulfatase NP_863892.1 217387 D 243090 CDS NP_863893.1 32470900 1793843 complement(218958..219986) 1 NC_005027.1 PMID: 9061023 best DB hits: BLAST: swissprot:P94326; TRPD_BRAJA ANTHRANILATE; E=4e-55 ddbj:BAB05379.1; (AP001512) anthranilate; E=3e-53 swissprot:O66576; TRPD_AQUAE ANTHRANILATE; E=1e-50 COG: BH1660; COG0547 Anthranilate phosphoribosyltransferase; E=2e-54 PFAM: PF02885; Glycosyl transferase,; E=7.5e-13 PF00591; Glycosyl transferase,; E=1.6e-96; anthranilate phosphoribosyltransferase 219986 trpD 1793843 trpD Rhodopirellula baltica SH 1 anthranilate phosphoribosyltransferase NP_863893.1 218958 R 243090 CDS NP_863894.1 32470901 1795836 complement(219979..220110) 1 NC_005027.1 hypothetical protein 220110 1795836 RB412 Rhodopirellula baltica SH 1 hypothetical protein NP_863894.1 219979 R 243090 CDS NP_863895.1 32470902 1796194 complement(220107..221150) 1 NC_005027.1 PMID: 11997336; signal peptide 221150 1796194 RB413 Rhodopirellula baltica SH 1 signal peptide NP_863895.1 220107 R 243090 CDS NP_863896.1 32470903 1790943 221324..222268 1 NC_005027.1 PMID: 8634238 best DB hits: BLAST: pdb:1EZR; A Chain A, Crystal Structure Of Nucleoside Hydrolase; E=3e-32 swissprot:Q27546; IUNH_CRIFA INOSINE-URIDINE PREFERRING NUCLEOSIDE; E=2e-31 pdb:2MAS; A Chain A, Purine Nucleoside Hydrolase With A Transition; E=4e-31 COG: yeiK; COG1957 Inosine-uridine nucleoside N-ribohydrolase; E=3e-31 PFAM: PF01156; Inosine-uridine preferring nucle; E=1.9e-51; inosine-uridine preferring nucleoside hydrolase 222268 iunH 1790943 iunH Rhodopirellula baltica SH 1 inosine-uridine preferring nucleoside hydrolase NP_863896.1 221324 D 243090 CDS NP_863897.1 32470904 1794068 222222..223313 1 NC_005027.1 PMID: 1466286 best DB hits: BLAST: gb:AAG59144.1; AE005625_7 (AE005625) orf, hypothetical protein; E=0.15 pir:I78664; hypothetical 34.1K protein (katg-glda intergenic region); E=0.20 swissprot:P32667; YIJE_ECOLI HYPOTHETICAL 32.9 KD PROTEIN IN; E=0.24 PFAM: PF00892; Integral membrane protein DUF6; E=9.9e-10; hypothetical protein 223313 1794068 RB418 Rhodopirellula baltica SH 1 hypothetical protein NP_863897.1 222222 D 243090 CDS NP_863898.1 32470905 1794686 223486..224613 1 NC_005027.1 PMID: 7768349 best DB hits: BLAST: swissprot:Q11053; PKNH_MYCTU PROBABLE SERINETHREONINE-PROTEIN; E=5e-14 pir:T42076; protein kinase homolog - Streptomyces coelicolor -----; E=2e-13 pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=4e-13 COG: Rv1266c; COG0515 Serine/threonine protein kinases; E=5e-15 PFAM: PF00069; Protein kinase domain; E=3.3e-32; serine/threonine-protein kinase 224613 1794686 RB419 Rhodopirellula baltica SH 1 serine/threonine-protein kinase NP_863898.1 223486 D 243090 CDS NP_863899.1 32470906 1795740 224577..225464 1 NC_005027.1 PMID: 10747806 best DB hits: BLAST: gb:AAK02399.1; (AE006067) SuhB [Pasteurella multocida]; E=5e-35 ddbj:BAB06354.1; (AP001516) myo-inositol-1(or 4)-monophosphatase; E=2e-33 swissprot:P22783; SUHB_ECOLI EXTRAGENIC SUPPRESSOR PROTEIN SUHB; E=6e-33 COG: BH2635; COG0483 Archaeal fructose-1,6-bisphosphatase and related; E=2e-34 VC2722; COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS); E=4e-11 PFAM: PF00459; Inositol monophosphatase; E=8.5e-66; inositol monophosphatase 225464 suhB 1795740 suhB Rhodopirellula baltica SH 1 inositol monophosphatase NP_863899.1 224577 D 243090 CDS NP_863900.1 32470907 1793509 225404..226054 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:A83440; conserved hypothetical protein PA1644 [imported] -; E=8e-29 pir:F75254; conserved hypothetical protein - Deinococcus radiodurans; E=3e-26 ddbj:BAB05997.1; (AP001515) BH2278~unknown conserved protein; E=1e-24 COG: PA1644; COG1853 Conserved protein/domain typically associated with; E=8e-30; hypothetical protein 226054 1793509 RB423 Rhodopirellula baltica SH 1 hypothetical protein NP_863900.1 225404 D 243090 CDS NP_863901.1 32470908 1792234 complement(226068..226220) 1 NC_005027.1 hypothetical protein 226220 1792234 RB424 Rhodopirellula baltica SH 1 hypothetical protein NP_863901.1 226068 R 243090 CDS NP_863902.1 32470909 1790717 226258..229863 1 NC_005027.1 hypothetical protein 229863 1790717 RB426 Rhodopirellula baltica SH 1 hypothetical protein NP_863902.1 226258 D 243090 CDS NP_863903.1 32470910 1795038 229809..231377 1 NC_005027.1 hypothetical protein 231377 1795038 RB430 Rhodopirellula baltica SH 1 hypothetical protein NP_863903.1 229809 D 243090 CDS NP_863904.1 32470911 1794169 231337..231744 1 NC_005027.1 signal peptide 231744 1794169 RB431 Rhodopirellula baltica SH 1 signal peptide NP_863904.1 231337 D 243090 CDS NP_863905.1 32470912 1796480 231791..231988 1 NC_005027.1 hypothetical protein 231988 1796480 RB434 Rhodopirellula baltica SH 1 hypothetical protein NP_863905.1 231791 D 243090 CDS NP_863906.1 32470913 1792094 232161..233408 1 NC_005027.1 best DB hits: PFAM: PF00589; Phage integrase; E=0.013; hypothetical protein 233408 1792094 RB437 Rhodopirellula baltica SH 1 hypothetical protein NP_863906.1 232161 D 243090 CDS NP_863907.1 32470914 1796562 233429..233737 1 NC_005027.1 signal peptide 233737 1796562 RB439 Rhodopirellula baltica SH 1 signal peptide NP_863907.1 233429 D 243090 CDS NP_863908.1 32470915 1794910 233878..234756 1 NC_005027.1 hypothetical protein 234756 1794910 RB442 Rhodopirellula baltica SH 1 hypothetical protein NP_863908.1 233878 D 243090 CDS NP_863909.1 32470916 1794528 234881..235261 1 NC_005027.1 hypothetical protein 235261 1794528 RB443 Rhodopirellula baltica SH 1 hypothetical protein NP_863909.1 234881 D 243090 CDS NP_863910.1 32470917 1796500 235258..236805 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAC08270.1; (AL392146) ATP-binding protein; E=1e-37; ATP-binding protein 236805 1796500 RB444 Rhodopirellula baltica SH 1 ATP-binding protein NP_863910.1 235258 D 243090 CDS NP_863911.1 32470918 1794018 complement(236794..236904) 1 NC_005027.1 hypothetical protein 236904 1794018 RB445 Rhodopirellula baltica SH 1 hypothetical protein NP_863911.1 236794 R 243090 CDS NP_863912.1 32470919 1795826 complement(236928..237320) 1 NC_005027.1 PMID: 9266672 best DB hits: BLAST: swissprot:O15442; 239A_HUMAN ADULT BRAIN PROTEIN 239 (239AB); E=4e-19 gb:AAC51673.2; (U84894) 239AB [Homo sapiens]; E=4e-19 prf:2122285A; 239FB gene [Homo sapiens]; E=1e-17 COG: APE2283; COG2129 Predicted phosphoesterases, related to the Icc; E=4e-06; hypothetical protein 237320 1795826 RB446 Rhodopirellula baltica SH 1 hypothetical protein NP_863912.1 236928 R 243090 CDS NP_863913.1 32470920 1794530 complement(237375..237587) 1 NC_005027.1 PMID: 9266672 best DB hits: BLAST: swissprot:O15442; 239A_HUMAN ADULT BRAIN PROTEIN 239 (239AB); E=0.014 gb:AAC51673.2; (U84894) 239AB [Homo sapiens]; E=0.014 ref:XP_013018.1; chromosome 22 open reading frame 1 [Homo; E=0.014 PFAM: PF01143; Uncharacterized phosphoesterase fami; E=0.00034; hypothetical protein 237587 1794530 RB448 Rhodopirellula baltica SH 1 hypothetical protein NP_863913.1 237375 R 243090 CDS NP_863914.1 32470921 1795228 complement(237584..238009) 1 NC_005027.1 hypothetical protein 238009 1795228 RB449 Rhodopirellula baltica SH 1 hypothetical protein NP_863914.1 237584 R 243090 CDS NP_863915.1 32470922 1793349 complement(237946..238155) 1 NC_005027.1 hypothetical protein 238155 1793349 RB450 Rhodopirellula baltica SH 1 hypothetical protein NP_863915.1 237946 R 243090 CDS NP_863916.1 32470923 1795128 238187..238390 1 NC_005027.1 PMID: 7607524 best DB hits: BLAST: swissprot:P50196; MTE8_ECOLI MODIFICATION METHYLASE ECO47II; E=4e-04 swissprot:P45876; DCMR_METSP TRANSCRIPTIONAL REPRESSOR DCMR; E=0.002 pir:T36638; probable substrate binding protein - Streptomyces; E=0.031; site-specific DNA-methyltransferase (cytosine-specific)- transcriptional regulator 238390 1795128 RB451 Rhodopirellula baltica SH 1 site-specific DNA-methyltransferase (cytosine-specific)- transcriptional regulator NP_863916.1 238187 D 243090 CDS NP_863917.1 32470924 1793738 238451..241546 1 NC_005027.1 PMID: 9679194 best DB hits: BLAST: pir:F71079; hypothetical protein PH0902 - Pyrococcus horikoshii; E=8e-08 pir:G75134; hypothetical protein PAB0589 - Pyrococcus abyssi (strain; E=3e-07 pir:G72734; hypothetical protein APE0415 - Aeropyrum pernix (strain; E=0.10 COG: PH0902; COG1483 Predicted ATPase of the AAA+ class; E=7e-09; hypothetical protein 241546 1793738 RB452 Rhodopirellula baltica SH 1 hypothetical protein NP_863917.1 238451 D 243090 CDS NP_863918.1 32470925 1794751 241543..242112 1 NC_005027.1 hypothetical protein 242112 1794751 RB453 Rhodopirellula baltica SH 1 hypothetical protein NP_863918.1 241543 D 243090 CDS NP_863919.1 32470926 1790919 242109..245120 1 NC_005027.1 PMID: 9389475 best DB hits: BLAST: ref:NP_071283.1; Predicted DNA methylase containing a Zn-ribbon; E=9e-14 pir:H72310; conserved hypothetical protein - Thermotoga maritima; E=4e-09 pir:A71080; hypothetical protein PH0905 - Pyrococcus horikoshii; E=8e-07 COG: AF2345+6+7; COG1743 Predicted DNA methylase containing a Zn-ribbon; E=8e-15; DNA methylase containing a Zn-ribbon 245120 1790919 RB454 Rhodopirellula baltica SH 1 DNA methylase containing a Zn-ribbon NP_863919.1 242109 D 243090 CDS NP_863920.1 32470927 1795504 245228..246406 1 NC_005027.1 PMID: 8688087 best DB hits: BLAST: gb:AAC37104.1; (L77118) M. jannaschii predicted coding region; E=4e-04 gb:AAG45955.1; AF282921_1 (AF282921) RecF protein; E=0.005 embl:CAA71688.1; (Y10687) purine NTPase [Sulfolobus; E=0.047 COG: jhp0346; COG1106 Predicted ATPases; E=0.005 PFAM: PF02463; SMC domain N terminal domain; E=5.1e-06; hypothetical protein 246406 1795504 RB457 Rhodopirellula baltica SH 1 hypothetical protein NP_863920.1 245228 D 243090 CDS NP_863921.1 32470928 1794542 246403..247077 1 NC_005027.1 hypothetical protein 247077 1794542 RB459 Rhodopirellula baltica SH 1 hypothetical protein NP_863921.1 246403 D 243090 CDS NP_863922.1 32470929 1794162 247083..249788 1 NC_005027.1 PMID: 155284 best DB hits: BLAST: pir:T17395; probable DEAH ATP-dependent helicase - Dichelobacter; E=2e-14 gb:AAG20812.1; (AE005149) ATP-dependent RNA helicase; HepA; E=2e-14 pir:D71079; hypothetical protein PH0900 - Pyrococcus horikoshii; E=1e-11 COG: PH0900; COG0553 Superfamily II DNA/RNA helicases, SNF2 family; E=1e-12 MJ0669; COG0513 Superfamily II DNA and RNA helicases; E=8e-08 AF2350; COG0553 Superfamily II DNA/RNA helicases, SNF2 family; E=4e-07 PFAM: PF00176; SNF2 and others N-terminal domain; E=7.6e-06 PF00271; Helicase conserved C-terminal doma; E=1.1e-12; DEAH ATP-dependent helicase 249788 1794162 RB460 Rhodopirellula baltica SH 1 DEAH ATP-dependent helicase NP_863922.1 247083 D 243090 CDS NP_863923.1 32470930 1794892 249801..250751 1 NC_005027.1 PMID: 11016950 best DB hits: BLAST: gb:AAG20152.1; (AE005093) Vng1977h [Halobacterium sp. NRC-1]; E=0.002; hypothetical protein 250751 1794892 RB461 Rhodopirellula baltica SH 1 hypothetical protein NP_863923.1 249801 D 243090 CDS NP_863924.1 32470931 1794015 250803..251342 1 NC_005027.1 hypothetical protein 251342 1794015 RB463 Rhodopirellula baltica SH 1 hypothetical protein NP_863924.1 250803 D 243090 CDS NP_863925.1 32470932 1792129 251275..251688 1 NC_005027.1 hypothetical protein 251688 1792129 RB464 Rhodopirellula baltica SH 1 hypothetical protein NP_863925.1 251275 D 243090 CDS NP_863926.1 32470933 1791801 complement(251791..252036) 1 NC_005027.1 hypothetical protein 252036 1791801 RB466 Rhodopirellula baltica SH 1 hypothetical protein NP_863926.1 251791 R 243090 CDS NP_863927.1 32470934 1795883 complement(252026..252319) 1 NC_005027.1 hypothetical protein 252319 1795883 RB468 Rhodopirellula baltica SH 1 hypothetical protein NP_863927.1 252026 R 243090 CDS NP_863928.1 32470935 1791313 complement(252291..252425) 1 NC_005027.1 best DB hits: PFAM: PF00665; Integrase core domain; E=0.2; hypothetical protein 252425 1791313 RB469 Rhodopirellula baltica SH 1 hypothetical protein NP_863928.1 252291 R 243090 CDS NP_863929.1 32470936 1792508 complement(252456..252713) 1 NC_005027.1 PMID: 7518087 best DB hits: BLAST: embl:CAB46576.1; (AJ132945) IS1329 transposase B [Yersinia; E=2e-09 embl:CAB61574.1; (AJ251581) transposase B [Yersinia; E=2e-09 prf:2113421B; transposase [Burkholderia cepacia]; E=4e-09 COG: DRB0019.2; COG2801 transposase; E=5e-12 PFAM: PF00665; Integrase core domain; E=5.4e-05; transposase 252713 1792508 RB470 Rhodopirellula baltica SH 1 transposase NP_863929.1 252456 R 243090 CDS NP_863930.1 32470937 1792884 complement(252719..253264) 1 NC_005027.1 hypothetical protein 253264 1792884 RB471 Rhodopirellula baltica SH 1 hypothetical protein NP_863930.1 252719 R 243090 CDS NP_863931.1 32470938 1791619 253266..253409 1 NC_005027.1 hypothetical protein 253409 1791619 RB472 Rhodopirellula baltica SH 1 hypothetical protein NP_863931.1 253266 D 243090 CDS NP_863932.1 32470939 1794822 253418..253648 1 NC_005027.1 signal peptide 253648 1794822 RB473 Rhodopirellula baltica SH 1 signal peptide NP_863932.1 253418 D 243090 CDS NP_863933.1 32470940 1793398 complement(253675..255858) 1 NC_005027.1 signal peptide 255858 1793398 RB475 Rhodopirellula baltica SH 1 signal peptide NP_863933.1 253675 R 243090 CDS NP_863934.1 32470941 1796559 complement(255869..259174) 1 NC_005027.1 PMID: 8008069 best DB hits: BLAST: gb:AAA58486.1; (L34075) FKBP-rapamycin associated protein [Homo; E=0.21 prf:2014422A; FKBP-rapamycin-associated protein [Homo sapiens]; E=0.21 gb:AAC39933.1; (U88966) rapamycin associated protein FRAP2 [Homo; E=0.21; FKBP-rapamycin associated protein 259174 1796559 RB479 Rhodopirellula baltica SH 1 FKBP-rapamycin associated protein NP_863934.1 255869 R 243090 CDS NP_863935.1 32470942 1795963 complement(259182..262586) 1 NC_005027.1 hypothetical protein 262586 1795963 RB481 Rhodopirellula baltica SH 1 hypothetical protein NP_863935.1 259182 R 243090 CDS NP_863936.1 32470943 1794191 262569..262733 1 NC_005027.1 hypothetical protein 262733 1794191 RB483 Rhodopirellula baltica SH 1 hypothetical protein NP_863936.1 262569 D 243090 CDS NP_863937.1 32470944 1795267 262633..262809 1 NC_005027.1 hypothetical protein 262809 1795267 RB484 Rhodopirellula baltica SH 1 hypothetical protein NP_863937.1 262633 D 243090 CDS NP_863938.1 32470945 1790260 262831..262968 1 NC_005027.1 hypothetical protein 262968 1790260 RB485 Rhodopirellula baltica SH 1 hypothetical protein NP_863938.1 262831 D 243090 CDS NP_863939.1 32470946 1793771 262950..263633 1 NC_005027.1 PMID: 8052622 best DB hits: BLAST: pir:E71368; probable RNA polymerase sigma-24 factor (rpoE) -; E=2e-05 gb:AAC45219.1; (U87308) extracytoplasmic function alternative; E=1e-04 pir:T45196; probable transcription initiation factor sigma factor; E=3e-04 COG: TP0092; COG1595 DNA-directed RNA polymerase specialized sigma; E=2e-06 Rv3286c; COG1191 DNA-directed RNA polymerase specialized sigma; E=0.005 Rv1189; COG1595 DNA-directed RNA polymerase specialized sigma; E=0.005; RNA polymerase ECF-type sigma factor 263633 1793771 RB486 Rhodopirellula baltica SH 1 RNA polymerase ECF-type sigma factor NP_863939.1 262950 D 243090 CDS NP_863940.1 32470947 1796099 263647..266280 1 NC_005027.1 hypothetical protein 266280 1796099 RB488 Rhodopirellula baltica SH 1 hypothetical protein NP_863940.1 263647 D 243090 CDS NP_863941.1 32470948 1792513 266293..267636 1 NC_005027.1 PMID: 11823852; hypothetical protein 267636 1792513 RB490 Rhodopirellula baltica SH 1 hypothetical protein NP_863941.1 266293 D 243090 CDS NP_863942.1 32470949 1790452 267633..269384 1 NC_005027.1 best DB hits: BLAST: gb:AAD34246.1; AF084398_1 (AF084398) calmodulin mutant SYNCAM46; E=0.002 gb:AAD34433.1; AF084449_1 (AF084449) calmodulin mutant SYNCAM26; E=0.002 prf:1003191A; calmodulin [Oryctolagus cuniculus]; E=0.002 PFAM: PF00036; EF hand; E=0.034 PF00395; S-layer homology domain; E=0.44; calmodulin 269384 1790452 RB492 Rhodopirellula baltica SH 1 calmodulin NP_863942.1 267633 D 243090 CDS NP_863943.1 32470950 1795342 269443..270549 1 NC_005027.1 best DB hits: BLAST: pir:B71126; hypothetical protein PH0776 - Pyrococcus horikoshii; E=9e-66 ddbj:BAB04450.1; (AP001509) BH0731~unknown conserved protein; E=1e-65 pir:C75037; methanol dehydrogenase regulatory protein (moxr-3); E=2e-64 COG: PH0776; COG0714 MoxR-like ATPases; E=8e-67 PFAM: PF01078; Magnesium chelatase, subunit C; E=1.2e-08; regulatory protein 270549 1795342 RB497 Rhodopirellula baltica SH 1 regulatory protein NP_863943.1 269443 D 243090 CDS NP_863944.1 32470951 1792831 270596..271717 1 NC_005027.1 PMID: 9634230 best DB hits: BLAST: swissprot:P71761; YE80_MYCTU HYPOTHETICAL 34.3 KDA PROTEIN RV1480; E=7e-17 pir:G70121; conserved hypothetical protein BB0175 - Lyme disease; E=5e-12 pir:D83106; hypothetical protein PA4323 [imported] - Pseudomonas; E=2e-09 COG: Rv1480; COG1721 Uncharacterized ACR; E=7e-18 PFAM: PF01882; Protein of unknown function DU; E=1.3e-17; hypothetical protein 271717 1792831 RB498 Rhodopirellula baltica SH 1 hypothetical protein NP_863944.1 270596 D 243090 CDS NP_863945.1 32470952 1794461 271714..274110 1 NC_005027.1 signal peptide 274110 1794461 RB500 Rhodopirellula baltica SH 1 signal peptide NP_863945.1 271714 D 243090 CDS NP_863946.1 32470953 1793809 274107..276965 1 NC_005027.1 PMID: 11474104; signal peptide 276965 1793809 RB502 Rhodopirellula baltica SH 1 signal peptide NP_863946.1 274107 D 243090 CDS NP_863947.1 32470954 1789911 276881..281737 1 NC_005027.1 PMID: 11403381 best DB hits: BLAST: embl:CAC28360.1; (AJ306290) myosin heavy chain [Toxocara canis]; E=0.054 gb:AAD29950.1; (AF111784) myosin heavy chain IIa [Homo sapiens]; E=0.19; hypothetical protein 281737 1789911 RB505 Rhodopirellula baltica SH 1 hypothetical protein NP_863947.1 276881 D 243090 CDS NP_863948.1 32470955 1791441 281746..282996 1 NC_005027.1 signal peptide 282996 1791441 RB510 Rhodopirellula baltica SH 1 signal peptide NP_863948.1 281746 D 243090 CDS NP_863949.1 32470956 1796461 complement(283061..284350) 1 NC_005027.1 signal peptide 284350 1796461 RB512 Rhodopirellula baltica SH 1 signal peptide NP_863949.1 283061 R 243090 CDS NP_863950.1 32470957 1791123 complement(284397..284567) 1 NC_005027.1 hypothetical protein 284567 1791123 RB514 Rhodopirellula baltica SH 1 hypothetical protein NP_863950.1 284397 R 243090 CDS NP_863951.1 32470958 1795594 complement(284655..284828) 1 NC_005027.1 hypothetical protein 284828 1795594 RB517 Rhodopirellula baltica SH 1 hypothetical protein NP_863951.1 284655 R 243090 CDS NP_863952.1 32470959 1796065 284784..285023 1 NC_005027.1 hypothetical protein 285023 1796065 RB518 Rhodopirellula baltica SH 1 hypothetical protein NP_863952.1 284784 D 243090 CDS NP_863953.1 32470960 1796047 complement(284872..285036) 1 NC_005027.1 hypothetical protein 285036 1796047 RB519 Rhodopirellula baltica SH 1 hypothetical protein NP_863953.1 284872 R 243090 CDS NP_863954.1 32470961 1792459 284989..286116 1 NC_005027.1 best DB hits: BLAST: pir:S75232; hypothetical protein sll1830 - Synechocystis sp. (strain; E=8e-04; hypothetical protein 286116 1792459 RB520 Rhodopirellula baltica SH 1 hypothetical protein NP_863954.1 284989 D 243090 CDS NP_863955.1 32470962 1794669 complement(286208..286399) 1 NC_005027.1 hypothetical protein 286399 1794669 RB521 Rhodopirellula baltica SH 1 hypothetical protein NP_863955.1 286208 R 243090 CDS NP_863956.1 32470963 1793003 286375..287550 1 NC_005027.1 PMID: 8041620 best DB hits: BLAST: swissprot:P37390; XYLR_ECOLI XYLOSE OPERON REGULATORY PROTEIN; E=3e-49 ddbj:BAB03212.1; (AB046360) xylose operon regulatory; E=1e-42 swissprot:P45043; XYLR_HAEIN XYLOSE OPERON REGULATORY PROTEIN; E=3e-42 COG: xylR_1; COG1609 Transcriptional regulators; E=2e-27 xylR_2; COG2207 AraC-type DNA-binding domain-containing proteins; E=1e-15 BS_degA; COG1609 Transcriptional regulators; E=1e-08 PFAM: PF00532; Periplasmic binding proteins; E=0.085 PF00165; Bacterial regulatory helix-tu; E=2e-18; xylose operon regulatory protein 287550 xylR 1793003 xylR Rhodopirellula baltica SH 1 xylose operon regulatory protein NP_863956.1 286375 D 243090 CDS NP_863957.1 32470964 1791667 complement(287547..287798) 1 NC_005027.1 hypothetical protein 287798 1791667 RB523 Rhodopirellula baltica SH 1 hypothetical protein NP_863957.1 287547 R 243090 CDS NP_863958.1 32470965 1792825 complement(287813..292486) 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB94634.1; (AL359215) secreted glycosyl hydrolase.; E=1e-09 pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=1e-04 embl:CAB55721.1; (AL117387) hypothetical protein SCF41.18; E=2e-04 PFAM: PF00034; Cytochrome c; E=0.0012; secreted glycosyl hydrolase 292486 1792825 RB524 Rhodopirellula baltica SH 1 secreted glycosyl hydrolase NP_863958.1 287813 R 243090 CDS NP_863959.1 32470966 1793251 complement(292699..293757) 1 NC_005027.1 PMID: 2404942 best DB hits: BLAST: pir:S75102; hypothetical protein sll0237 - Synechocystis sp. (strain; E=7e-43 ddbj:BAB04232.1; (AP001508) iron (III) transport system (iron; E=9e-24 ddbj:BAA75385.1; (AB013374) Yvfk [Bacillus halodurans]; E=2e-21 COG: sll0237; COG1840 ABC-type thiamine transport systems, periplasmic; E=6e-44 VC1424; COG0687 Spermidine/putrescine-binding periplasmic protein; E=7e-04 PFAM: PF01547; Bacterial extracellular solut; E=0.027; iron (III) transport system (iron (III)-binding protein) 293757 1793251 RB531 Rhodopirellula baltica SH 1 iron (III) transport system (iron (III)-binding protein) NP_863959.1 292699 R 243090 CDS NP_863960.1 32470967 1794121 293751..295241 1 NC_005027.1 hypothetical protein 295241 1794121 RB533 Rhodopirellula baltica SH 1 hypothetical protein NP_863960.1 293751 D 243090 CDS NP_863961.1 32470968 1793602 complement(295211..295480) 1 NC_005027.1 hypothetical protein 295480 1793602 RB534 Rhodopirellula baltica SH 1 hypothetical protein NP_863961.1 295211 R 243090 CDS NP_863962.1 32470969 1792776 complement(295255..295503) 1 NC_005027.1 hypothetical protein 295503 1792776 RB535 Rhodopirellula baltica SH 1 hypothetical protein NP_863962.1 295255 R 243090 CDS NP_863963.1 32470970 1792259 complement(295500..296285) 1 NC_005027.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 296285 pdxJ 1792259 pdxJ Rhodopirellula baltica SH 1 pyridoxine 5'-phosphate synthase NP_863963.1 295500 R 243090 CDS NP_863964.1 32470971 1794539 296227..296457 1 NC_005027.1 hypothetical protein 296457 1794539 RB537 Rhodopirellula baltica SH 1 hypothetical protein NP_863964.1 296227 D 243090 CDS NP_863965.1 32470972 1793962 complement(296509..297921) 1 NC_005027.1 best DB hits: BLAST: pir:T34935; hypothetical protein SC3F9.13 SC3F9.13 - Streptomyces; E=2e-43 pir:T36186; hypothetical protein SCE29.07c - Streptomyces coelicolor; E=2e-37; hypothetical protein 297921 1793962 RB538 Rhodopirellula baltica SH 1 hypothetical protein NP_863965.1 296509 R 243090 CDS NP_863966.1 32470973 1796481 298032..299390 1 NC_005027.1 PMID: 7538190 best DB hits: BLAST: gb:AAB47708.1; (U87792) CinA [Bacillus subtilis]; E=4e-36 swissprot:P46323; CINA_BACSU CINA-LIKE PROTEIN ----- pir:; E=3e-34 ddbj:BAB06104.1; (AP001515) competence-damage inducible protein; E=7e-33 COG: BS_cinA_1; COG1058 Predicted nucleotide-utilizing enzyme related to; E=2e-31; competence-damage inducible protein CinA 299390 cinA 1796481 cinA Rhodopirellula baltica SH 1 competence-damage inducible protein CinA NP_863966.1 298032 D 243090 CDS NP_863967.1 32470974 1792266 299365..299871 1 NC_005027.1 signal peptide 299871 1792266 RB541 Rhodopirellula baltica SH 1 signal peptide NP_863967.1 299365 D 243090 CDS NP_863968.1 32470975 1792441 299822..300022 1 NC_005027.1 hypothetical protein 300022 1792441 RB543 Rhodopirellula baltica SH 1 hypothetical protein NP_863968.1 299822 D 243090 CDS NP_863969.1 32470976 1792207 300059..302806 1 NC_005027.1 best DB hits: PFAM: PF01239; Protein prenyltransferase alpha subu; E=0.28; hypothetical protein 302806 1792207 RB544 Rhodopirellula baltica SH 1 hypothetical protein NP_863969.1 300059 D 243090 CDS NP_863970.1 32470977 1796033 302834..304291 1 NC_005027.1 hypothetical protein 304291 1796033 RB546 Rhodopirellula baltica SH 1 hypothetical protein NP_863970.1 302834 D 243090 CDS NP_863971.1 32470978 1795129 complement(304329..306230) 1 NC_005027.1 PMID: 8068720 PMID: 3013861 best DB hits: BLAST: swissprot:P52980; GLGB_STRAU 1,4-ALPHA-GLUCAN BRANCHING ENZYME; E=2e-46 swissprot:P30537; GLGB_BACCL 1,4-ALPHA-GLUCAN BRANCHING ENZYME; E=7e-45 pir:D82511; 1,4-alpha-glucan branching enzyme VCA0016 [imported] -; E=1e-44 COG: VCA0016; COG0296 1,4-alpha-glucan branching enzyme; E=1e-45 BS_amyX; COG1523 Pullulanase and related glycosidases; E=2e-21 YEL011w; COG0296 1,4-alpha-glucan branching enzyme; E=3e-20 PFAM: PF02922; Isoamylase N-terminal domain; E=2.3e-15 PF01208; Uroporphyrinogen decarboxylas; E=0.27 PF00128; Alpha amylase, catalytic doma; E=2.5e-11; 1,4-alpha-glucan branching enzyme 306230 glgB 1795129 glgB Rhodopirellula baltica SH 1 1,4-alpha-glucan branching enzyme NP_863971.1 304329 R 243090 CDS NP_863972.1 32470979 1795154 complement(306211..306324) 1 NC_005027.1 hypothetical protein 306324 1795154 RB549 Rhodopirellula baltica SH 1 hypothetical protein NP_863972.1 306211 R 243090 CDS NP_863973.1 32470980 1797038 complement(306296..306709) 1 NC_005027.1 signal peptide 306709 1797038 RB550 Rhodopirellula baltica SH 1 signal peptide NP_863973.1 306296 R 243090 CDS NP_863974.1 32470981 1791395 306967..308226 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:G83477; probable sigma-70 factor, ECF subfamily PA1351; E=1e-94 swissprot:Q52997; YDNY_RHIME HYPOTHETICAL 47.0 KDA PROTEIN IN DNAA; E=9e-61 pir:T35586; hypothetical protein SC6G4.35 SC6G4.35 - Streptomyces; E=3e-52 COG: PA1351_1; COG1595 DNA-directed RNA polymerase specialized sigma; E=5e-39 PFAM: PF00515; TPR Domain; E=0.00013; ECF subfamily RNA polymerase sigma-70 factor 308226 1791395 RB555 Rhodopirellula baltica SH 1 ECF subfamily RNA polymerase sigma-70 factor NP_863974.1 306967 D 243090 CDS NP_863975.1 32470982 1794511 308213..308356 1 NC_005027.1 hypothetical protein 308356 1794511 RB556 Rhodopirellula baltica SH 1 hypothetical protein NP_863975.1 308213 D 243090 CDS NP_863976.1 32470983 1794824 308223..308384 1 NC_005027.1 hypothetical protein 308384 1794824 RB557 Rhodopirellula baltica SH 1 hypothetical protein NP_863976.1 308223 D 243090 CDS NP_863977.1 32470984 1795483 complement(308327..308491) 1 NC_005027.1 hypothetical protein 308491 1795483 RB558 Rhodopirellula baltica SH 1 hypothetical protein NP_863977.1 308327 R 243090 CDS NP_863978.1 32470985 1790010 complement(308542..309384) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:E83477; conserved hypothetical protein PA1349 [imported] -; E=3e-18 swissprot:Q52996; YDNX_RHIME HYPOTHETICAL 13.6 KDA PROTEIN IN DNAA; E=1e-07 pir:C83475; hypothetical protein PA1354 [imported] - Pseudomonas; E=4e-06; hypothetical protein 309384 1790010 RB560 Rhodopirellula baltica SH 1 hypothetical protein NP_863978.1 308542 R 243090 CDS NP_863979.1 32470986 1792215 complement(309395..309868) 1 NC_005027.1 PMID: 11474104; hypothetical protein 309868 1792215 RB562 Rhodopirellula baltica SH 1 hypothetical protein NP_863979.1 309395 R 243090 CDS NP_863980.1 32470987 1792096 complement(309988..310866) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:C83475; hypothetical protein PA1354 [imported] - Pseudomonas; E=7e-41 pir:T35585; hypothetical protein SC6G4.34 - Streptomyces; E=3e-14 pir:E83575; hypothetical protein PA0557 [imported] - Pseudomonas; E=7e-09; hypothetical protein 310866 1792096 RB563 Rhodopirellula baltica SH 1 hypothetical protein NP_863980.1 309988 R 243090 CDS NP_863981.1 32470988 1790364 complement(311123..312007) 1 NC_005027.1 PMID: 9260957 PMID: 11481431 best DB hits: BLAST: gb:AAC45595.1; (AF006743) unknown [Caulobacter crescentus]; E=0.65; transmembrane protein 312007 1790364 RB566 Rhodopirellula baltica SH 1 transmembrane protein NP_863981.1 311123 R 243090 CDS NP_863982.1 32470989 1791939 complement(312112..312345) 1 NC_005027.1 hypothetical protein 312345 1791939 RB568 Rhodopirellula baltica SH 1 hypothetical protein NP_863982.1 312112 R 243090 CDS NP_863983.1 32470990 1793024 312309..313103 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=2e-08 embl:CAB94634.1; (AL359215) secreted glycosyl hydrolase.; E=3e-07 embl:CAB45032.1; (AL078635) large multi-functional; E=8e-05; hypothetical protein 313103 1793024 RB569 Rhodopirellula baltica SH 1 hypothetical protein NP_863983.1 312309 D 243090 CDS NP_863984.1 32470991 1796268 313188..313316 1 NC_005027.1 hypothetical protein 313316 1796268 RB573 Rhodopirellula baltica SH 1 hypothetical protein NP_863984.1 313188 D 243090 CDS NP_863985.1 32470992 1793212 313360..317520 1 NC_005027.1 PMID: 10910347 best DB hits: BLAST: pir:D82679; hypothetical protein XF1451 [imported] - Xylella; E=6e-11 COG: XF1451; COG1305 transglutaminases, cysteine; E=5e-12 PFAM: PF01841; Transglutaminase-like superfam; E=0.0045; hypothetical protein 317520 1793212 RB574 Rhodopirellula baltica SH 1 hypothetical protein NP_863985.1 313360 D 243090 CDS NP_863986.1 32470993 1794361 complement(317768..317929) 1 NC_005027.1 hypothetical protein 317929 1794361 RB576 Rhodopirellula baltica SH 1 hypothetical protein NP_863986.1 317768 R 243090 CDS NP_863987.1 32470994 1791073 complement(317961..320072) 1 NC_005027.1 PMID: 10684935 best DB hits: BLAST: pir:G71518; hypothetical protein pmpB - Chlamydia trachomatis; E=4e-07 pir:C81675; polymorphic membrane protein BC family TC0694; E=2e-06 gb:AAG57362.1; AE005455_3 (AE005455) ATP-binding; E=3e-05 PFAM: PF02415; Chlamydia protein of unknown functio; E=0.076; hypothetical protein 320072 1791073 RB577 Rhodopirellula baltica SH 1 hypothetical protein NP_863987.1 317961 R 243090 CDS NP_863988.1 32470995 1794437 complement(320069..320230) 1 NC_005027.1 hypothetical protein 320230 1794437 RB578 Rhodopirellula baltica SH 1 hypothetical protein NP_863988.1 320069 R 243090 CDS NP_863989.1 32470996 1795041 complement(320366..320590) 1 NC_005027.1 hypothetical protein 320590 1795041 RB580 Rhodopirellula baltica SH 1 hypothetical protein NP_863989.1 320366 R 243090 CDS NP_863990.1 32470997 1796520 320566..320787 1 NC_005027.1 hypothetical protein 320787 1796520 RB583 Rhodopirellula baltica SH 1 hypothetical protein NP_863990.1 320566 D 243090 CDS NP_863991.1 32470998 1795074 320892..324914 1 NC_005027.1 hypothetical protein 324914 1795074 RB588 Rhodopirellula baltica SH 1 hypothetical protein NP_863991.1 320892 D 243090 CDS NP_863992.1 32470999 1794904 324950..326290 1 NC_005027.1 signal peptide 326290 1794904 RB598 Rhodopirellula baltica SH 1 signal peptide NP_863992.1 324950 D 243090 CDS NP_863993.1 32471000 1795800 326287..327777 1 NC_005027.1 PMID: 7744957 PMID: 8108379 best DB hits: BLAST: pir:A57282; ankyrin-related protein unc-44 - Caenorhabditis elegans; E=1e-18 pir:T15347; ankyrin-related unc-44 - Caenorhabditis elegans -----; E=1e-18 pir:T15344; ankyrin-related unc-44 - Caenorhabditis elegans -----; E=1e-18 COG: slr1109; COG0666 Ankyrin repeat proteins; E=2e-12 PFAM: PF00023; Ank repeat; E=1.3e-08; ankyrin-related protein 327777 1795800 RB601 Rhodopirellula baltica SH 1 ankyrin-related protein NP_863993.1 326287 D 243090 CDS NP_863994.1 32471001 1795676 327902..329341 1 NC_005027.1 PMID: 2598936 best DB hits: BLAST: embl:CAA34667.1; (X16679) arylsulfatase [Hemicentrotus; E=1e-33 pir:S07089; arylsulfatase (EC 3.1.6.1) - sea urchin (Lytechinus; E=2e-33 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=2e-33 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=4e-23 yejM; COG3083 Predicted hydrolase of alkaline phosphatase; E=0.006 Rv0663; COG3119 Arylsulfatase A and related enzymes; E=0.008 PFAM: PF00884; Sulfatase; E=5.6e-40; arylsulfatase 329341 1795676 RB605 Rhodopirellula baltica SH 1 arylsulfatase NP_863994.1 327902 D 243090 CDS NP_863995.1 32471002 1791859 329397..331193 1 NC_005027.1 PMID: 99269066 best DB hits: BLAST: gb:AAF71375.1; AF262989_2 (AF262989) arylsulfatase [Klebsiella; E=3e-30 ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=4e-30 gb:AAF71377.1; AF262990_2 (AF262990) arylsulfatase [Klebsiella; E=5e-30 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=1e-26 VC2041; COG3083 Predicted hydrolase of alkaline phosphatase; E=2e-04 VNG0061C; COG3119 Arylsulfatase A and related enzymes; E=0.002 PFAM: PF00884; Sulfatase; E=1.3e-38; arylsulfatase 331193 1791859 RB607 Rhodopirellula baltica SH 1 arylsulfatase NP_863995.1 329397 D 243090 CDS NP_863996.1 32471003 1791447 complement(331232..333445) 1 NC_005027.1 PMID: 9384377 best DB hits: BLAST: pir:B69988; hypothetical protein ytaP - Bacillus subtilis -----; E=2e-08 gb:AAB68821.1; (AF001926) xylan esterase 1 [Thermoanaerobacterium; E=0.001 pir:G82643; conserved hypothetical protein XF1745 [imported] -; E=0.003 COG: XF1745; COG1073 Hydrolases of the alpha/beta superfamily; E=3e-04 PFAM: PF01738; Dienelactone hydrolase; E=0.53; xylan esterase 333445 1791447 RB609 Rhodopirellula baltica SH 1 xylan esterase NP_863996.1 331232 R 243090 CDS NP_863997.1 32471004 1791871 333482..333649 1 NC_005027.1 hypothetical protein 333649 1791871 RB612 Rhodopirellula baltica SH 1 hypothetical protein NP_863997.1 333482 D 243090 CDS NP_863998.1 32471005 1793301 333675..334874 1 NC_005027.1 PMID: 7601151 PMID: 8654419 best DB hits: BLAST: pir:S52317; quinohemoprotein ethanol dehydrogenase (EC 1.1.99.-); E=0.006 gb:AAF86335.1; (AF277373) terahydrofurfuryl alcohol dehydrogenase; E=0.36 pir:A82284; conserved hypothetical protein VC0762 [imported] -; E=0.76 PFAM: PF01011; PQQ enzyme repeat; E=0.29; quinohemoprotein ethanol dehydrogenase 334874 1793301 RB614 Rhodopirellula baltica SH 1 quinohemoprotein ethanol dehydrogenase NP_863998.1 333675 D 243090 CDS NP_863999.1 32471006 1795443 335196..338141 1 NC_005027.1 PMID: 2110981 best DB hits: BLAST: swissprot:Q00808; HET1_PODAN VEGETATIBLE INCOMPATIBILITY PROTEIN; E=1e-17 gb:AAG40737.1; AF299085_1 (AF299085) Bap1 [Myxococcus xanthus]; E=3e-12 embl:CAB45034.1; (AL078635) WD-repeat containing protein; E=3e-12 COG: sll1491; COG2319 WD40 repeat protein; E=2e-06 PFAM: PF00400; WD domain, G-beta repeat; E=0.017; hypothetical protein 338141 1795443 RB617 Rhodopirellula baltica SH 1 hypothetical protein NP_863999.1 335196 D 243090 CDS NP_864000.1 32471007 1792097 complement(338154..338729) 1 NC_005027.1 PMID: 12024217 best DB hits: BLAST: gb:AAB64901.1; AAB64901 (U33050) Spp41p: Negative regulator of prp; E=0.81 swissprot:P38904; SP41_YEAST SPP41 PROTEIN ----- gb: AAA20494.1; E=0.81; sigma factor 338729 1792097 RB621 Rhodopirellula baltica SH 1 sigma factor NP_864000.1 338154 R 243090 CDS NP_864001.1 32471008 1796525 complement(338779..339549) 1 NC_005027.1 hypothetical protein 339549 1796525 RB624 Rhodopirellula baltica SH 1 hypothetical protein NP_864001.1 338779 R 243090 CDS NP_864002.1 32471009 1794645 complement(339497..339703) 1 NC_005027.1 hypothetical protein 339703 1794645 RB625 Rhodopirellula baltica SH 1 hypothetical protein NP_864002.1 339497 R 243090 CDS NP_864003.1 32471010 1795724 339710..340357 1 NC_005027.1 best DB hits: PFAM: PF00036; EF hand; E=0.00026; hypothetical protein 340357 1795724 RB626 Rhodopirellula baltica SH 1 hypothetical protein NP_864003.1 339710 D 243090 CDS NP_864004.1 32471011 1793942 340354..340629 1 NC_005027.1 hypothetical protein 340629 1793942 RB629 Rhodopirellula baltica SH 1 hypothetical protein NP_864004.1 340354 D 243090 CDS NP_864005.1 32471012 1791904 340807..343146 1 NC_005027.1 PMID: 7768349 best DB hits: BLAST: pir:T42100; serinethreonine protein kinase (EC 2.7.1.-) -; E=5e-32 pir:T36502; serinethreonine protein kinase - Streptomyces; E=8e-32 swissprot:P33973; PKN1_MYXXA SERINETHREONINE-PROTEIN KINASE PKN1; E=2e-28 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=3e-29 PFAM: PF00069; Protein kinase domain; E=7e-46 PF00591; Glycosyl transferase,; E=0.28 PF00515; TPR Domain; E=0.0037; serine/threonine protein kinase 343146 1791904 RB631 Rhodopirellula baltica SH 1 serine/threonine protein kinase NP_864005.1 340807 D 243090 CDS NP_864006.1 32471013 1793514 complement(343157..345652) 1 NC_005027.1 PMID: 7922023 best DB hits: BLAST: ddbj:BAA83376.1; (AB028841) BbTPO [Branchiostoma belcheri]; E=2e-72 pir:T23007; hypothetical protein K09C8.5 - Caenorhabditis elegans; E=1e-68 gb:AAF51201.1; (AE003582) CG3131 gene product [Drosophila; E=2e-67 PFAM: PF00404; Dockerin type I repeat; E=0.028 PF00141; Peroxidase; E=5.3e-11; peroxidase 345652 1793514 RB633 Rhodopirellula baltica SH 1 peroxidase NP_864006.1 343157 R 243090 CDS NP_864007.1 32471014 1795566 345888..346430 1 NC_005027.1 PMID: 7889935 best DB hits: BLAST: gb:AAK03873.1; (AE006215) RpoE [Pasteurella multocida]; E=2e-07 swissprot:P44790; RPOE_HAEIN RNA POLYMERASE SIGMA-E FACTOR; E=2e-06 gb:AAD42769.1; AF121849_1 (AF121849) SigG [Synechococcus sp. PCC; E=2e-05 COG: HI0628; COG1595 DNA-directed RNA polymerase specialized sigma; E=2e-07 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=0.13; ECF subfamily RNA polymerase sigma-70 factor 346430 1795566 RB637 Rhodopirellula baltica SH 1 ECF subfamily RNA polymerase sigma-70 factor NP_864007.1 345888 D 243090 CDS NP_864008.1 32471015 1791654 346447..347757 1 NC_005027.1 PMID: 8063104 best DB hits: BLAST: swissprot:P54741; AFSK_STRCO SERINETHREONINE PROTEIN KINASE AFSK; E=0.077 embl:CAB88430.1; (AL353815) serinethreonine protein kinase; E=0.077 pir:A82284; conserved hypothetical protein VC0762 [imported] -; E=0.32 PFAM: PF01011; PQQ enzyme repeat; E=0.39; serine/threonine protein kinase 347757 1791654 RB638 Rhodopirellula baltica SH 1 serine/threonine protein kinase NP_864008.1 346447 D 243090 CDS NP_864009.1 32471016 1793788 347897..351409 1 NC_005027.1 best DB hits: BLAST: pir:G82753; two-component system, sensor protein XF0853 [imported] -; E=2e-41 gb:AAA98756.1; (L29642) sensor kinase [Pseudomonas fluorescens]; E=8e-39 pir:A82300; sensory box sensor histidine kinaseresponse regulator; E=4e-34 COG: XF0853; COG0642 Sensory transduction histidine kinases; E=2e-42 sll0779_1; COG2202 PAS/PAC domain; E=1e-23 VCA0736_1; COG0642 Sensory transduction histidine kinases; E=1e-23 PFAM: PF00785; PAC motif; E=8.5e-08 PF00989; PAS domain; E=0.013 PF00785; PAC motif; E=0.1; sensory histidine protein kinase 351409 1793788 RB641 Rhodopirellula baltica SH 1 sensory histidine protein kinase NP_864009.1 347897 D 243090 CDS NP_864010.1 32471017 1792697 complement(351560..353170) 1 NC_005027.1 best DB hits: BLAST: embl:CAA71101.1; (Y09979) squalene-hopene cyclase; E=0.72 pir:T48782; lanosterol synthase related protein [imported] -; E=0.76; hypothetical protein 353170 1792697 RB645 Rhodopirellula baltica SH 1 hypothetical protein NP_864010.1 351560 R 243090 CDS NP_864011.1 32471018 1791207 complement(353262..353750) 1 NC_005027.1 hypothetical protein 353750 1791207 RB651 Rhodopirellula baltica SH 1 hypothetical protein NP_864011.1 353262 R 243090 CDS NP_864012.1 32471019 1793076 complement(353953..354993) 1 NC_005027.1 PMID: 9634230 best DB hits: BLAST: swissprot:Q50653; YP68_MYCTU HYPOTHETICAL 38.0 KDA PROTEIN RV2568C; E=2e-35; hypothetical protein 354993 1793076 RB655 Rhodopirellula baltica SH 1 hypothetical protein NP_864012.1 353953 R 243090 CDS NP_864013.1 32471020 1794327 complement(354990..356228) 1 NC_005027.1 best DB hits: BLAST: embl:CAB83202.1; (AJ277117) membrane protein; E=1e-43 pir:H82825; transport protein XF0281 [imported] - Xylella fastidiosa; E=6e-29 gb:AAK04089.1; (AE006236) unknown [Pasteurella multocida]; E=2e-15 COG: XF0281; COG0628 Predicted permease; E=6e-30 PFAM: PF01594; Domain of unknown function DUF20; E=0.00041; permease 356228 1794327 RB658 Rhodopirellula baltica SH 1 permease NP_864013.1 354990 R 243090 CDS NP_864014.1 32471021 1791088 356219..356416 1 NC_005027.1 hypothetical protein 356416 1791088 RB659 Rhodopirellula baltica SH 1 hypothetical protein NP_864014.1 356219 D 243090 CDS NP_864015.1 32471022 1794516 complement(356466..357368) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:G83411; hypothetical protein PA1872 [imported] - Pseudomonas; E=3e-46 PFAM: PF00560; Leucine Rich Repeat; E=0.12; hypothetical protein 357368 1794516 RB661 Rhodopirellula baltica SH 1 hypothetical protein NP_864015.1 356466 R 243090 CDS NP_864016.1 32471023 1794729 complement(357369..357608) 1 NC_005027.1 hypothetical protein 357608 1794729 RB663 Rhodopirellula baltica SH 1 hypothetical protein NP_864016.1 357369 R 243090 CDS NP_864017.1 32471024 1794025 357735..357956 1 NC_005027.1 PMID: 11481431; hypothetical protein 357956 1794025 RB666 Rhodopirellula baltica SH 1 hypothetical protein NP_864017.1 357735 D 243090 CDS NP_864018.1 32471025 1795930 357993..358883 1 NC_005027.1 best DB hits: BLAST: gb:AAB89497.1; (AE000982) lysophospholipase [Archaeoglobus; E=6e-28 gb:AAK05664.1; AE006387_7 (AE006387) conserved hypothetical; E=4e-23 pir:F72264; hypothetical protein TM1350 - Thermotoga maritima; E=5e-21 COG: AF1753; COG2267 Lysophospholipase; E=6e-29 DR1351; COG0596 Predicted hydrolases or acyltransferases (alpha/beta; E=2e-04 DR2522; COG2267 Lysophospholipase; E=4e-04 PFAM: PF00561; alpha/beta hydrolase fold; E=3.2e-07; lysophospholipase 358883 pldB 1795930 pldB Rhodopirellula baltica SH 1 lysophospholipase NP_864018.1 357993 D 243090 CDS NP_864019.1 32471026 1794454 complement(358905..359315) 1 NC_005027.1 hypothetical protein 359315 1794454 RB670 Rhodopirellula baltica SH 1 hypothetical protein NP_864019.1 358905 R 243090 CDS NP_864020.1 32471027 1789913 359218..359586 1 NC_005027.1 hypothetical protein 359586 1789913 RB671 Rhodopirellula baltica SH 1 hypothetical protein NP_864020.1 359218 D 243090 CDS NP_864021.1 32471028 1791873 complement(359528..359779) 1 NC_005027.1 hypothetical protein 359779 1791873 RB674 Rhodopirellula baltica SH 1 hypothetical protein NP_864021.1 359528 R 243090 CDS NP_864022.1 32471029 1796516 complement(359793..361220) 1 NC_005027.1 best DB hits: PFAM: PF00324; Amino acid permease; E=0.79; hypothetical protein 361220 1796516 RB675 Rhodopirellula baltica SH 1 hypothetical protein NP_864022.1 359793 R 243090 CDS NP_864023.1 32471030 1795065 complement(361305..362588) 1 NC_005027.1 catalyzes the formation of L-rhamnulose from L-rhamnose; L-rhamnose isomerase 362588 rhaA 1795065 rhaA Rhodopirellula baltica SH 1 L-rhamnose isomerase NP_864023.1 361305 R 243090 CDS NP_864024.1 32471031 1795104 complement(362605..362787) 1 NC_005027.1 hypothetical protein 362787 1795104 RB679 Rhodopirellula baltica SH 1 hypothetical protein NP_864024.1 362605 R 243090 CDS NP_864025.1 32471032 1795938 362786..363658 1 NC_005027.1 PMID: 3316663 best DB hits: BLAST: swissprot:P09378; RHAR_ECOLI L-RHAMNOSE OPERON TRANSCRIPTIONAL; E=1e-25 gb:AAG59100.1; AE005622_2 (AE005622) positive regulator for rhaRS; E=2e-25 gb:AAG59099.1; AE005622_1 (AE005622) positive regulator for rhaBAD; E=2e-20 COG: rhaR; COG2207 AraC-type DNA-binding domain-containing proteins; E=1e-26 PFAM: PF00165; Bacterial regulatory helix-turn-heli; E=2.7e-30; L-rhamnose operon transcriptional activator 363658 rhaR 1795938 rhaR Rhodopirellula baltica SH 1 L-rhamnose operon transcriptional activator NP_864025.1 362786 D 243090 CDS NP_864026.1 32471033 1795492 complement(363698..364990) 1 NC_005027.1 PMID: 2664711 best DB hits: BLAST: pir:E72546; L-fuculose-phosphate aldolase homolog - Aeropyrum pernix; E=6e-15 pir:C69054; L-fuculose-phosphate aldolase homolog - Methanobacterium; E=3e-14 swissprot:Q57199; YGBL_HAEIN HYPOTHETICAL PROTEIN HI1012 -----; E=9e-13 COG: APE1657; COG0235 Ribulose-5-phosphate 4-epimerase and related; E=6e-16 PFAM: PF00596; Class II Aldolase and Adducin N-t; E=8.8e-19; L-fuculose-phosphate aldolase 364990 fucA 1795492 fucA Rhodopirellula baltica SH 1 L-fuculose-phosphate aldolase NP_864026.1 363698 R 243090 CDS NP_864027.1 32471034 1796271 complement(365036..366523) 1 NC_005027.1 PMID: 7484410 best DB hits: BLAST: gb:AAF52769.1; (AE003624) CG3752 gene product [Drosophila; E=5e-73 ddbj:BAA34785.1; (AB015226) RALDH2 [Homo sapiens]; E=2e-72 swissprot:O94788; DHAS_HUMAN RETINALDEHYDE-SPECIFIC DEHYDROGENASE; E=2e-72 COG: YOR374w; COG1012 NAD-dependent aldehyde dehydrogenases; E=2e-71 PFAM: PF00171; Aldehyde dehydrogenase; E=7e-156; aldehyde dehydrogenase 366523 1796271 RB683 Rhodopirellula baltica SH 1 aldehyde dehydrogenase NP_864027.1 365036 R 243090 CDS NP_864028.1 32471035 1796567 complement(366596..368557) 1 NC_005027.1 PMID: 7744061 best DB hits: BLAST: swissprot:P51691; ARS_PSEAE ARYLSULFATASE (ARYL-SULFATE; E=3e-67 pir:S69336; arylsulfatase (EC 3.1.6.1) - Pseudomonas aeruginosa; E=3e-66 gb:AAF71377.1; AF262990_2 (AF262990) arylsulfatase [Klebsiella; E=1e-53 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=3e-68 HI1246; COG1368 Phosphoglycerol transferase and related proteins,; E=2e-05 PA2333; COG3119 Arylsulfatase A and related enzymes; E=4e-04 PFAM: PF00884; Sulfatase; E=1.3e-78; arylsulfatase 368557 1796567 RB684 Rhodopirellula baltica SH 1 arylsulfatase NP_864028.1 366596 R 243090 CDS NP_864029.1 32471036 1795539 complement(368557..370206) 1 NC_005027.1 PMID: 7744061 best DB hits: BLAST: swissprot:P51691; ARS_PSEAE ARYLSULFATASE (ARYL-SULFATE; E=4e-51 pir:S69336; arylsulfatase (EC 3.1.6.1) - Pseudomonas aeruginosa; E=8e-51 gb:AAF71377.1; AF262990_2 (AF262990) arylsulfatase [Klebsiella; E=1e-41 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=4e-52 PFAM: PF00884; Sulfatase; E=2.2e-86; arylsulfatase 370206 1795539 RB686 Rhodopirellula baltica SH 1 arylsulfatase NP_864029.1 368557 R 243090 CDS NP_864030.1 32471037 1792624 complement(370208..370468) 1 NC_005027.1 hypothetical protein 370468 1792624 RB691 Rhodopirellula baltica SH 1 hypothetical protein NP_864030.1 370208 R 243090 CDS NP_864031.1 32471038 1792507 complement(370408..371190) 1 NC_005027.1 PMID: 7542800 PMID: 11997336 best DB hits: BLAST: swissprot:P43965; YAFM_HAEIN HYPOTHETICAL PROTEIN HI0217 -----; E=0.012 COG: HI0217; COG1943 Predicted transposase; E=0.001; hypothetical protein 371190 1792507 RB693 Rhodopirellula baltica SH 1 hypothetical protein NP_864031.1 370408 R 243090 CDS NP_864032.1 32471039 1794878 complement(371239..373908) 1 NC_005027.1 PMID: 20164110 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=2e-39 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=3e-38 gb:AAF49287.1; (AE003522) CG7402 gene product [Drosophila; E=3e-31 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=3e-30 VCA0802; COG1368 Phosphoglycerol transferase and related proteins,; E=1e-04 VNG0061C; COG3119 Arylsulfatase A and related enzymes; E=2e-04 PFAM: PF00143; Interferon alpha/beta domain; E=0.59 PF00884; Sulfatase; E=1.9e-42; N-acetylgalactosamine-6-sulfatase 373908 1794878 RB695 Rhodopirellula baltica SH 1 N-acetylgalactosamine-6-sulfatase NP_864032.1 371239 R 243090 CDS NP_864033.1 32471040 1793775 complement(374015..377554) 1 NC_005027.1 PMID: 10632887 best DB hits: BLAST: embl:CAB53341.1; (AJ238748) alfa-L-rhamnosidase [Clostridium; E=1e-103 pir:T36406; hypothetical protein SCF34.07 - Streptomyces coelicolor; E=4e-89 embl:CAB55731.1; (AL117387) secreted protein [Streptomyces; E=1e-69 PFAM: PF02083; Urotensin II; E=0.87; alfa-L-rhamnosidase 377554 ramA 1793775 ramA Rhodopirellula baltica SH 1 alfa-L-rhamnosidase NP_864033.1 374015 R 243090 CDS NP_864034.1 32471041 1796522 377648..377797 1 NC_005027.1 hypothetical protein 377797 1796522 RB701 Rhodopirellula baltica SH 1 hypothetical protein NP_864034.1 377648 D 243090 CDS NP_864035.1 32471042 1794424 complement(377956..378195) 1 NC_005027.1 hypothetical protein 378195 1794424 RB702 Rhodopirellula baltica SH 1 hypothetical protein NP_864035.1 377956 R 243090 CDS NP_864036.1 32471043 1794562 378137..378427 1 NC_005027.1 PMID: 9761671 best DB hits: BLAST: gb:AAG58100.1; AE005527_3 (AE005527) unknown protein encoded by; E=0.002 gb:AAG53987.1; AF327445_1 (AF327445) transposase A; E=0.003 gb:AAF28119.1; AF153317_15 (AF153317) InsA [Shigella; E=0.007 COG: PA1937; COG2963 Transposase; E=0.004 PFAM: PF01381; Helix-turn-helix; E=0.53 PF01527; Transposase; E=6.1e-18; transposase 378427 1794562 RB704 Rhodopirellula baltica SH 1 transposase NP_864036.1 378137 D 243090 CDS NP_864037.1 32471044 1794004 378430..379308 1 NC_005027.1 PMID: 11735367 best DB hits: BLAST: gb:AAA88919.1; (U13013) ORFB [Leptospira interrogans]; E=3e-47 gb:AAA88916.1; (U13012) ORFB [Leptospira interrogans]; E=1e-46 gb:AAC05649.1; (AF038931) probable transposase-related protein; E=1e-45 COG: DRB0019.2; COG2801 transposase; E=1e-35 PFAM: PF00665; Integrase core domain; E=4.8e-40; transposase 379308 1794004 RB706 Rhodopirellula baltica SH 1 transposase NP_864037.1 378430 D 243090 CDS NP_864038.1 32471045 complement(379337..380773) 1 NC_005027.1 sulfatase 1 precursor 380773 1794004 NP_864038.1 Rhodopirellula baltica SH 1 sulfatase 1 precursor NP_864038.1 379337 R 243090 CDS NP_864039.1 32471046 1791909 complement(380766..381533) 1 NC_005027.1 best DB hits: BLAST: embl:CAC24059.1; (AL512981) Hypothetical [Sulfolobus; E=1e-05 pir:A82418; arylesterase VCA0783 [imported] - Vibrio cholerae (group; E=0.057 swissprot:P54451; YQEF_BACSU HYPOTHETICAL 27.6 KD LIPOPROTEIN IN; E=0.49 COG: VCA0783; COG2755 Lysophospholipase L1 and related esterases; E=0.005; hypothetical protein 381533 1791909 RB711 Rhodopirellula baltica SH 1 hypothetical protein NP_864039.1 380766 R 243090 CDS NP_864040.1 32471047 1790754 381726..382076 1 NC_005027.1 hypothetical protein 382076 1790754 RB713 Rhodopirellula baltica SH 1 hypothetical protein NP_864040.1 381726 D 243090 CDS NP_864041.1 32471048 1793712 381937..384627 1 NC_005027.1 PMID: 11016950 best DB hits: BLAST: gb:AAG18913.1; (AE004993) chromosome segregation; Smc1; E=0.010 COG: VNG0342G; COG1196 Chromosome segregation ATPases; E=0.001; chromosome segregation protein 384627 1793712 RB714 Rhodopirellula baltica SH 1 chromosome segregation protein NP_864041.1 381937 D 243090 CDS NP_864042.1 32471049 1790214 384519..386105 1 NC_005027.1 best DB hits: BLAST: gb:AAK03766.1; (AE006204) unknown [Pasteurella multocida]; E=0.34; related to sulfatase 386105 1790214 RB716 Rhodopirellula baltica SH 1 related to sulfatase NP_864042.1 384519 D 243090 CDS NP_864043.1 32471050 1790206 complement(386095..386211) 1 NC_005027.1 hypothetical protein 386211 1790206 RB718 Rhodopirellula baltica SH 1 hypothetical protein NP_864043.1 386095 R 243090 CDS NP_864044.1 32471051 1790053 386206..386481 1 NC_005027.1 hypothetical protein 386481 1790053 RB719 Rhodopirellula baltica SH 1 hypothetical protein NP_864044.1 386206 D 243090 CDS NP_864045.1 32471052 1795142 complement(386468..387808) 1 NC_005027.1 PMID: 20164110 best DB hits: BLAST: gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=2e-23 ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=1e-21 gb:AAF58475.1; (AE003821) CG8646 gene product [Drosophila; E=3e-19 COG: yidJ; COG3119 Arylsulfatase A and related enzymes; E=3e-15 VCA0802; COG1368 Phosphoglycerol transferase and related proteins,; E=3e-07 Rv0663; COG3119 Arylsulfatase A and related enzymes; E=5e-07 PFAM: PF00884; Sulfatase; E=4.9e-29; N-acetylgalactosamine-6-sulfatase 387808 1795142 RB720 Rhodopirellula baltica SH 1 N-acetylgalactosamine-6-sulfatase NP_864045.1 386468 R 243090 CDS NP_864046.1 32471053 1795493 388051..388233 1 NC_005027.1 hypothetical protein 388233 1795493 RB723 Rhodopirellula baltica SH 1 hypothetical protein NP_864046.1 388051 D 243090 CDS NP_864047.1 32471054 1790267 complement(388252..389658) 1 NC_005027.1 PMID: 11181566 best DB hits: BLAST: gb:AAG41945.1; AF304053_1 (AF304053) heparan N-sulfatase [Mus; E=1e-29 gb:AAG41946.1; AF304054_1 (AF304054) mutant heparan N-sulfatase; E=1e-29 gb:AAF29467.1; (AF156255) N-sulfoglucosamine sulfohydrolase [Mus; E=1e-29 COG: Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=3e-25 PFAM: PF00884; Sulfatase; E=1e-29; heparan N-sulfatase 389658 1790267 RB724 Rhodopirellula baltica SH 1 heparan N-sulfatase NP_864047.1 388252 R 243090 CDS NP_864048.1 32471055 1794077 complement(389661..393461) 1 NC_005027.1 PMID: 1646017 best DB hits: BLAST: pir:T36406; hypothetical protein SCF34.07 - Streptomyces coelicolor; E=2e-05 pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=0.010 PFAM: PF00034; Cytochrome c; E=0.00011; cytochrome c 393461 1794077 RB728 Rhodopirellula baltica SH 1 cytochrome c NP_864048.1 389661 R 243090 CDS NP_864049.1 32471056 1795058 392739..393617 1 NC_005027.1 hypothetical protein 393617 1795058 RB733 Rhodopirellula baltica SH 1 hypothetical protein NP_864049.1 392739 D 243090 CDS NP_864050.1 32471057 1791014 complement(393610..393774) 1 NC_005027.1 hypothetical protein 393774 1791014 RB735 Rhodopirellula baltica SH 1 hypothetical protein NP_864050.1 393610 R 243090 CDS NP_864051.1 32471058 1793457 complement(393734..396208) 1 NC_005027.1 PMID: 10632887 best DB hits: BLAST: pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=1e-04 embl:CAB53341.1; (AJ238748) alfa-L-rhamnosidase [Clostridium; E=0.019; rhamnosidase 396208 1793457 RB736 Rhodopirellula baltica SH 1 rhamnosidase NP_864051.1 393734 R 243090 CDS NP_864052.1 32471059 1790248 396210..396782 1 NC_005027.1 hypothetical protein 396782 1790248 RB741 Rhodopirellula baltica SH 1 hypothetical protein NP_864052.1 396210 D 243090 CDS NP_864053.1 32471060 1794445 complement(396869..397759) 1 NC_005027.1 PMID: 7684040 best DB hits: BLAST: gb:AAG58136.1; AE005530_2 (AE005530) enzyme [Escherichia; E=1e-83 pir:E65086; hypothetical protein b2999 - Escherichia coli (strain; E=4e-35 pir:F65086; hypothetical protein b3000 - Escherichia coli (strain; E=2e-31 COG: yghX+Y; COG0412 Dienelactone hydrolase and related enzymes; E=3e-36 PFAM: PF01738; Dienelactone hydrolase; E=5.7e-57; carboxymethylenebutenolidase 397759 1794445 RB745 Rhodopirellula baltica SH 1 carboxymethylenebutenolidase NP_864053.1 396869 R 243090 CDS NP_864054.1 32471061 1793158 complement(397939..399552) 1 NC_005027.1 PMID: 9371463 best DB hits: BLAST: pir:H69064; serinethreonine protein kinase related protein -; E=5e-05 pir:JC4881; polyvinyl-alcohol dehydrogenase (acceptor) (EC; E=0.017 gb:AAB89850.1; (AE001008) conserved hypothetical protein; E=0.076 COG: MTH1485; COG1520 Uncharacterized proteins of WD40-like repeat family; E=4e-06 PFAM: PF01011; PQQ enzyme repeat; E=0.1 PF00993; Class II histocompatibility ant; E=0.47 PF01011; PQQ enzyme repeat; E=0.00012; serine/threonine protein kinase related protein 399552 1793158 RB749 Rhodopirellula baltica SH 1 serine/threonine protein kinase related protein NP_864054.1 397939 R 243090 CDS NP_864055.1 32471062 1793165 complement(399365..400045) 1 NC_005027.1 hypothetical protein 400045 1793165 RB751 Rhodopirellula baltica SH 1 hypothetical protein NP_864055.1 399365 R 243090 CDS NP_864056.1 32471063 1795101 399966..403046 1 NC_005027.1 PMID: 10952301 best DB hits: BLAST: pir:E82064; conserved hypothetical protein VC2547 [imported] -; E=0.44; hypothetical protein 403046 1795101 RB752 Rhodopirellula baltica SH 1 hypothetical protein NP_864056.1 399966 D 243090 CDS NP_864057.1 32471064 1793087 403211..404305 1 NC_005027.1 PMID: 7596293 best DB hits: BLAST: pir:S75310; gumB protein - Synechocystis sp. (strain PCC 6803); E=3e-06 pir:E72350; hypothetical protein TM0638 - Thermotoga maritima; E=0.005 swissprot:Q46629; AMSH_ERWAM AMYLOVORAN EXPORT OUTER MEMBRANE; E=0.012 COG: sll1581; COG1596 Periplasmic protein involved in polysaccharide; E=3e-07 yccZ; COG1596 Periplasmic protein involved in polysaccharide export; E=0.009; polysaccharide export protein 404305 1793087 RB754 Rhodopirellula baltica SH 1 polysaccharide export protein NP_864057.1 403211 D 243090 CDS NP_864058.1 32471065 1796721 complement(404655..406817) 1 NC_005027.1 PMID: 3040663 PMID: 3260234 PMID: 2404938 best DB hits: BLAST: swissprot:P12287; BLAR_BACLI REGULATORY PROTEIN BLAR1 -----; E=7e-09 pir:I39942; penicillinase antirepressor penJ - Bacillus; E=8e-09 swissprot:P26597; MECR_STAEP METHICILLIN RESISTANCE MECR1 PROTEIN; E=4e-07; beta-lactamase regulatory protein 406817 1796721 RB756 Rhodopirellula baltica SH 1 beta-lactamase regulatory protein NP_864058.1 404655 R 243090 CDS NP_864059.1 32471066 1793130 complement(406810..407223) 1 NC_005027.1 PMID: 3096969 PMID: 3305074 PMID: 3260234 PMID: 3040663 PMID: 3498148 best DB hits: BLAST: swissprot:P06555; BLAI_BACLI PENICILLINASE REPRESSOR (REGULATORY; E=0.24 pir:B28183; beta-lactamase repressor protein - Bacillus; E=0.34 swissprot:P26598; MECI_STAEP METHICILLIN RESISTANCE REGULATORY; E=0.60; beta-lactamase repressor protein 407223 1793130 RB757 Rhodopirellula baltica SH 1 beta-lactamase repressor protein NP_864059.1 406810 R 243090 CDS NP_864060.1 32471067 1794613 complement(407340..407558) 1 NC_005027.1 hypothetical protein 407558 1794613 RB758 Rhodopirellula baltica SH 1 hypothetical protein NP_864060.1 407340 R 243090 CDS NP_864061.1 32471068 1794374 407598..409022 1 NC_005027.1 PMID: 20164110 best DB hits: BLAST: gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=7e-47 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=8e-44 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=8e-44 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=6e-26 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=9e-06 Rv3077; COG3119 Arylsulfatase A and related enzymes; E=6e-04 PFAM: PF00884; Sulfatase; E=8.3e-90; N-acetylgalactosamine-6-sulfatase 409022 1794374 RB760 Rhodopirellula baltica SH 1 N-acetylgalactosamine-6-sulfatase NP_864061.1 407598 D 243090 CDS NP_864062.1 32471069 1793785 409112..411349 1 NC_005027.1 PMID: 8244397 PMID: 8325651 best DB hits: BLAST: gb:AAA16877.1; (L13329) iduronate-2-sulfatase [Homo sapiens]; E=7e-39 gb:AAB33747.1; iduronate-2-sulfatase, IDS {EC 3.1.6.13} [human,; E=3e-38 gb:AAA37880.1; (L07921) iduronate sulfatase [Mus musculus]; E=5e-36 COG: yidJ; COG3119 Arylsulfatase A and related enzymes; E=3e-26 PFAM: PF00884; Sulfatase; E=2e-26; iduronate-2-sulfatase 411349 1793785 RB763 Rhodopirellula baltica SH 1 iduronate-2-sulfatase NP_864062.1 409112 D 243090 CDS NP_864063.1 32471070 1794876 411420..412355 1 NC_005027.1 best DB hits: PFAM: PF01453; Lectin (probable mannose binding); E=0.047; signal peptide 412355 1794876 RB767 Rhodopirellula baltica SH 1 signal peptide NP_864063.1 411420 D 243090 CDS NP_864064.1 32471071 1791769 412481..413953 1 NC_005027.1 PMID: 8020961 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=3e-56 pir:S07089; arylsulfatase (EC 3.1.6.1) - sea urchin (Lytechinus; E=4e-56 embl:CAA34667.1; (X16679) arylsulfatase [Hemicentrotus; E=6e-56 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=1e-29 PA1689; COG1368 Phosphoglycerol transferase and related proteins,; E=6e-07 PA2333; COG3119 Arylsulfatase A and related enzymes; E=5e-05 PFAM: PF00884; Sulfatase; E=3.9e-110; N-acetylgalactosamine 6-sulfate sulfatase (GALNS) 413953 1791769 RB772 Rhodopirellula baltica SH 1 N-acetylgalactosamine 6-sulfate sulfatase (GALNS) NP_864064.1 412481 D 243090 CDS NP_864065.1 32471072 1793353 413727..415415 1 NC_005027.1 PMID: 3181160 best DB hits: BLAST: pir:S07089; arylsulfatase (EC 3.1.6.1) - sea urchin (Lytechinus; E=2e-29 swissprot:P14000; ARS_HEMPU ARYLSULFATASE PRECURSOR (ARYL-SULFATE; E=2e-29 embl:CAA34667.1; (X16679) arylsulfatase [Hemicentrotus; E=2e-29 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=3e-25 VC2041; COG3083 Predicted hydrolase of alkaline phosphatase; E=6e-05 VNG0061C; COG3119 Arylsulfatase A and related enzymes; E=9e-05 PFAM: PF00884; Sulfatase; E=6.3e-50; arylsulfatase 415415 1793353 RB773 Rhodopirellula baltica SH 1 arylsulfatase NP_864065.1 413727 D 243090 CDS NP_864066.1 32471073 1790100 415412..416224 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB45032.1; (AL078635) large multi-functional; E=7e-23 embl:CAB58265.1; (AL121849) multi-domain protein; E=5e-21 pir:T36423; probable large, multifunctional secreted protein -; E=0.048; large multi-functional protein 416224 1790100 RB774 Rhodopirellula baltica SH 1 large multi-functional protein NP_864066.1 415412 D 243090 CDS NP_864067.1 32471074 1791787 complement(416203..416391) 1 NC_005027.1 hypothetical protein 416391 1791787 RB776 Rhodopirellula baltica SH 1 hypothetical protein NP_864067.1 416203 R 243090 CDS NP_864068.1 32471075 1795694 416395..417333 1 NC_005027.1 PMID: 9256491 best DB hits: BLAST: pir:T03516; probable outer membrane secretion protein - Rhodobacter; E=0.040 gb:AAA21546.1; (U13767) HlyA [Anabaena sp.]; E=0.18 gb:AAF36415.1; (AF141932) rhizobiocin RzcA [Rhizobium leguminosarum; E=0.30; outer membrane secretion protein 417333 1795694 RB777 Rhodopirellula baltica SH 1 outer membrane secretion protein NP_864068.1 416395 D 243090 CDS NP_864069.1 32471076 1793107 complement(417532..418773) 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 418773 1793107 RB778 Rhodopirellula baltica SH 1 signal peptide NP_864069.1 417532 R 243090 CDS NP_864070.1 32471077 1790774 complement(418785..419045) 1 NC_005027.1 hypothetical protein 419045 1790774 RB779 Rhodopirellula baltica SH 1 hypothetical protein NP_864070.1 418785 R 243090 CDS NP_864071.1 32471078 1792024 complement(419050..419298) 1 NC_005027.1 hypothetical protein 419298 1792024 RB782 Rhodopirellula baltica SH 1 hypothetical protein NP_864071.1 419050 R 243090 CDS NP_864072.1 32471079 1794163 complement(419311..420540) 1 NC_005027.1 best DB hits: BLAST: swissprot:P74311; Y944_SYNY3 HYPOTHETICAL 42.4 KDA PROTEIN SLR0944; E=2e-86 pir:H81780; probable integral membrane efflux protein NMA2095; E=3e-47 gb:AAK04027.1; (AE006231) unknown [Pasteurella multocida]; E=7e-40 COG: slr0944; COG0798 Arsenite efflux pump ACR3 and related permeases; E=2e-87 PFAM: PF01758; Sodium Bile acid symporter family; E=7.8e-49; integral membrane efflux protein 420540 1794163 RB783 Rhodopirellula baltica SH 1 integral membrane efflux protein NP_864072.1 419311 R 243090 CDS NP_864073.1 32471080 1793034 420625..420963 1 NC_005027.1 hypothetical protein 420963 1793034 RB785 Rhodopirellula baltica SH 1 hypothetical protein NP_864073.1 420625 D 243090 CDS NP_864074.1 32471081 1790947 complement(421117..422328) 1 NC_005027.1 PMID: 11325940 best DB hits: BLAST: ddbj:BAA89624.1; (AB036665) similar to transposase of Tn5; E=0.043 embl:CAA23888.1; (V00615) open reading frame [Escherichia coli]; E=0.17 embl:CAA23891.1; (V00617) open reading frame [Escherichia coli]; E=0.17 PFAM: PF01609; Transposase (IS4 family); E=0.079; transposase 422328 1790947 RB787 Rhodopirellula baltica SH 1 transposase NP_864074.1 421117 R 243090 CDS NP_864075.1 32471082 1791317 complement(422341..422529) 1 NC_005027.1 hypothetical protein 422529 1791317 RB790 Rhodopirellula baltica SH 1 hypothetical protein NP_864075.1 422341 R 243090 CDS NP_864076.1 32471083 1793371 complement(422526..422726) 1 NC_005027.1 hypothetical protein 422726 1793371 RB791 Rhodopirellula baltica SH 1 hypothetical protein NP_864076.1 422526 R 243090 CDS NP_864077.1 32471084 1791824 422908..424260 1 NC_005027.1 PMID: 9537504 best DB hits: BLAST: pir:H83377; probable transporter PA2135 [imported] - Pseudomonas; E=2e-35 ddbj:BAB07757.1; (AP001520) Na+H+ antiporter [Bacillus; E=0.002 gb:AAF72041.1; AF128238_1 (AF128238) Na+H+ antiporter Cnh1; E=0.003 COG: PA2135; COG0025 NhaP-type Na+/H+ and K+/H+ antiporters; E=1e-36 PFAM: PF00999; Sodium/hydrogen exchanger fami; E=1.3e-14; Na+/H+ antiporter 424260 1791824 RB792 Rhodopirellula baltica SH 1 Na+/H+ antiporter NP_864077.1 422908 D 243090 CDS NP_864078.1 32471085 1794944 424501..424962 1 NC_005027.1 best DB hits: PFAM: PF00459; Inositol monophosphatase; E=0.67; hypothetical protein 424962 1794944 RB794 Rhodopirellula baltica SH 1 hypothetical protein NP_864078.1 424501 D 243090 CDS NP_864079.1 32471086 1790513 424970..425245 1 NC_005027.1 hypothetical protein 425245 1790513 RB795 Rhodopirellula baltica SH 1 hypothetical protein NP_864079.1 424970 D 243090 CDS NP_864080.1 32471087 1792682 complement(425294..425506) 1 NC_005027.1 hypothetical protein 425506 1792682 RB796 Rhodopirellula baltica SH 1 hypothetical protein NP_864080.1 425294 R 243090 CDS NP_864081.1 32471088 1794569 complement(426227..426385) 1 NC_005027.1 signal peptide 426385 1794569 RB800 Rhodopirellula baltica SH 1 signal peptide NP_864081.1 426227 R 243090 CDS NP_864082.1 32471089 1796498 426456..426674 1 NC_005027.1 hypothetical protein 426674 1796498 RB803 Rhodopirellula baltica SH 1 hypothetical protein NP_864082.1 426456 D 243090 CDS NP_864083.1 32471090 1794053 complement(427858..429036) 1 NC_005027.1 PMID: 10708371 best DB hits: BLAST: gb:AAG55028.1; AE005248_9 (AE005248) receptor; E=4e-61 gb:AAG54539.1; AE005200_1 (AE005200) Z0271 gene product; E=1e-60 swissprot:P28917; YDCC_ECOLI H REPEAT-ASSOCIATED PROTEIN IN; E=1e-60 PFAM: PF01811; Transposase; E=1.3e-65; transposase 429036 1794053 RB807 Rhodopirellula baltica SH 1 transposase NP_864083.1 427858 R 243090 CDS NP_864084.1 32471091 1791818 complement(429085..429444) 1 NC_005027.1 hypothetical protein 429444 1791818 RB809 Rhodopirellula baltica SH 1 hypothetical protein NP_864084.1 429085 R 243090 CDS NP_864085.1 32471092 1792240 complement(429550..429768) 1 NC_005027.1 hypothetical protein 429768 1792240 RB812 Rhodopirellula baltica SH 1 hypothetical protein NP_864085.1 429550 R 243090 CDS NP_864086.1 32471093 1794895 complement(429749..429985) 1 NC_005027.1 hypothetical protein 429985 1794895 RB813 Rhodopirellula baltica SH 1 hypothetical protein NP_864086.1 429749 R 243090 CDS NP_864087.1 32471094 1796462 429942..430241 1 NC_005027.1 PMID: 9761671 PMID: 11823852 best DB hits: BLAST: pir:H83522; conserved hypothetical protein PA0979 [imported] -; E=0.33 PFAM: PF01527; Transposase; E=4.2e-19; transposase 430241 1796462 RB814 Rhodopirellula baltica SH 1 transposase NP_864087.1 429942 D 243090 CDS NP_864088.1 32471095 1795553 430238..431110 1 NC_005027.1 PMID: 10384242 best DB hits: BLAST: gb:AAB58155.1; (U82621) hypothetical protein [Shigella flexneri]; E=3e-34 gb:AAF09022.1; (AF139596) unknown [Shigella flexneri]; E=3e-34 gb:AAC61713.1; (AF081284) Hp1 [Escherichia coli]; E=1e-33 COG: tra5_g4; COG2801 transposase; E=1e-26 PFAM: PF00665; Integrase core domain; E=5e-39; transposase 431110 1795553 RB815 Rhodopirellula baltica SH 1 transposase NP_864088.1 430238 D 243090 CDS NP_864089.1 32471096 1795354 complement(431107..431538) 1 NC_005027.1 hypothetical protein 431538 1795354 RB817 Rhodopirellula baltica SH 1 hypothetical protein NP_864089.1 431107 R 243090 CDS NP_864090.1 32471097 1793122 431574..432953 1 NC_005027.1 PMID: 8828137 best DB hits: BLAST: gb:AAC38715.1; (AF030367) maturase-related protein [Streptococcus; E=2e-46 ddbj:BAA90841.1; (AB031210) orf1; similar to E. coli ykfC; E=2e-45 ddbj:BAB03943.1; (AP001507) transposase (11) [Bacillus; E=2e-45 COG: BH0099; COG3344 Uncharacterized BCR; E=2e-46 PFAM: PF00078; Reverse transcriptase (RNA-dependen; E=2.5e-60; reverse transcriptase/maturase 432953 1793122 RB818 Rhodopirellula baltica SH 1 reverse transcriptase/maturase NP_864090.1 431574 D 243090 CDS NP_864091.1 32471098 1791938 432966..433259 1 NC_005027.1 hypothetical protein 433259 1791938 RB820 Rhodopirellula baltica SH 1 hypothetical protein NP_864091.1 432966 D 243090 CDS NP_864092.1 32471099 1791495 433321..433638 1 NC_005027.1 hypothetical protein 433638 1791495 RB821 Rhodopirellula baltica SH 1 hypothetical protein NP_864092.1 433321 D 243090 CDS NP_864093.1 32471100 1792443 complement(433535..433771) 1 NC_005027.1 hypothetical protein 433771 1792443 RB822 Rhodopirellula baltica SH 1 hypothetical protein NP_864093.1 433535 R 243090 CDS NP_864094.1 32471101 1792773 complement(433831..434184) 1 NC_005027.1 hypothetical protein 434184 1792773 RB825 Rhodopirellula baltica SH 1 hypothetical protein NP_864094.1 433831 R 243090 CDS NP_864095.1 32471102 1795985 434151..434627 1 NC_005027.1 signal peptide 434627 1795985 RB827 Rhodopirellula baltica SH 1 signal peptide NP_864095.1 434151 D 243090 CDS NP_864096.1 32471103 1790276 434675..435073 1 NC_005027.1 hypothetical protein 435073 1790276 RB828 Rhodopirellula baltica SH 1 hypothetical protein NP_864096.1 434675 D 243090 CDS NP_864097.1 32471104 1794993 435009..435359 1 NC_005027.1 hypothetical protein 435359 1794993 RB829 Rhodopirellula baltica SH 1 hypothetical protein NP_864097.1 435009 D 243090 CDS NP_864098.1 32471105 1792625 complement(435506..438748) 1 NC_005027.1 PMID: 8407802 best DB hits: BLAST: pir:G64595; acriflavine resistance protein - Helicobacter pylori; E=8e-52 gb:AAC14433.1; (AF059041) RND pump protein [Helicobacter pylori]; E=2e-51 pir:F82171; transporter, AcrBD/F family VC1673 [imported] - Vibrio; E=6e-44 COG: HP0607; COG0841 Cation/multidrug efflux pump; E=8e-53 PFAM: PF00873; AcrB/AcrD/AcrF family; E=5.9e-08; cation/multidrug efflux pump 438748 1792625 RB832 Rhodopirellula baltica SH 1 cation/multidrug efflux pump NP_864098.1 435506 R 243090 CDS NP_864099.1 32471106 1795944 complement(438745..438894) 1 NC_005027.1 hypothetical protein 438894 1795944 RB834 Rhodopirellula baltica SH 1 hypothetical protein NP_864099.1 438745 R 243090 CDS NP_864100.1 32471107 1791209 complement(438956..440851) 1 NC_005027.1 best DB hits: BLAST: pir:A83330; probable RND efflux membrane fusion protein precursor; E=0.001 pir:A83342; conserved hypothetical protein PA2430 [imported] -; E=0.009 gb:AAC38085.1; (AF012101) VceA [Vibrio cholerae]; E=0.040 COG: PA2430; COG1566 Multidrug resistance efflux pump; E=9e-04 PFAM: PF00529; HlyD family secretion protein; E=3.1e-06; multidrug resistance efflux pump 440851 1791209 RB835 Rhodopirellula baltica SH 1 multidrug resistance efflux pump NP_864100.1 438956 R 243090 CDS NP_864101.1 32471108 1795999 complement(440832..441593) 1 NC_005027.1 PMID: 10671440 best DB hits: BLAST: gb:AAF20930.1; AF207529_4 (AF207529) PhlH [Pseudomonas; E=2e-04 pir:C70617; probable transcriptional regulator Rv0144 - Mycobacterium; E=0.005 pir:T36792; probable transcriptional regulator tetR - Streptomyces; E=0.022 COG: Rv0144; COG1309 Transcriptional regulator; E=4e-04 PFAM: PF00440; Bacterial regulatory proteins, tetR; E=7.5e-12; transcriptional regulator 441593 1795999 RB838 Rhodopirellula baltica SH 1 transcriptional regulator NP_864101.1 440832 R 243090 CDS NP_864102.1 32471109 1794495 441662..441844 1 NC_005027.1 hypothetical protein 441844 1794495 RB839 Rhodopirellula baltica SH 1 hypothetical protein NP_864102.1 441662 D 243090 CDS NP_864103.1 32471110 1796993 complement(442147..444654) 1 NC_005027.1 PMID: 1369081 best DB hits: BLAST: gb:AAB49694.1; (U89495) protease [Bacillus sp. PD498]; E=7e-19 pir:I39973; alkaline serine proteinase - Bacillus smithii -----; E=2e-18 swissprot:P35835; SUBN_BACNA SUBTILISIN NAT PRECURSOR -----; E=1e-17 COG: BS_aprE; COG1404 Subtilisin-like serine proteases; E=2e-18 PFAM: PF00082; Subtilase; E=7.8e-27; subtilisin 444654 1796993 RB841 Rhodopirellula baltica SH 1 subtilisin NP_864103.1 442147 R 243090 CDS NP_864104.1 32471111 1796518 complement(444706..444930) 1 NC_005027.1 hypothetical protein 444930 1796518 RB842 Rhodopirellula baltica SH 1 hypothetical protein NP_864104.1 444706 R 243090 CDS NP_864105.1 32471112 1794231 445096..449727 1 NC_005027.1 PMID: 93125117 PMID: 95198547 PMID: 11759840 best DB hits: BLAST: pir:S61441; surface-associated protein cshA precursor - Streptococcus; E=6e-05 pir:S27982; cshA protein - Streptococcus gordonii (fragment); E=0.006 ddbj:BAB10333.1; (AB016872) gene_id:K21P3.2~unknown protein; E=0.025 PFAM: PF00404; Dockerin type I repeat; E=0.61; surface-associated protein cshA precursor 449727 1794231 RB844 Rhodopirellula baltica SH 1 surface-associated protein cshA precursor NP_864105.1 445096 D 243090 CDS NP_864106.1 32471113 1790771 450001..451803 1 NC_005027.1 signal peptide 451803 1790771 RB850 Rhodopirellula baltica SH 1 signal peptide NP_864106.1 450001 D 243090 CDS NP_864107.1 32471114 1796521 complement(451843..452154) 1 NC_005027.1 hypothetical protein 452154 1796521 RB854 Rhodopirellula baltica SH 1 hypothetical protein NP_864107.1 451843 R 243090 CDS NP_864108.1 32471115 1794080 452224..453138 1 NC_005027.1 PMID: 8404889 PMID: 3098260 best DB hits: BLAST: swissprot:P16115; LDH_THEMA L-LACTATE DEHYDROGENASE ----- pir:; E=2e-51 pdb:1A5Z; Lactate Dehydrogenase From Thermotoga Maritima; E=2e-51 pdb:1LLC; L-Lactate Dehydrogenase (E.C.1.1.1.27) Complex With; E=9e-49 COG: TM1867; COG0039 Malate/lactate dehydrogenases; E=2e-52 PFAM: PF00056; lactate/malate dehydrogenase, NA; E=7.5e-36 PF02866; lactate/malate dehydrogenase, al; E=5e-36; L-lactate/malate dehydrogenase 453138 ldh 1794080 ldh Rhodopirellula baltica SH 1 L-lactate/malate dehydrogenase NP_864108.1 452224 D 243090 CDS NP_864109.1 32471116 1793049 complement(453154..454224) 1 NC_005027.1 hypothetical protein 454224 1793049 RB857 Rhodopirellula baltica SH 1 hypothetical protein NP_864109.1 453154 R 243090 CDS NP_864110.1 32471117 1795127 complement(454221..456329) 1 NC_005027.1 signal peptide 456329 1795127 RB858 Rhodopirellula baltica SH 1 signal peptide NP_864110.1 454221 R 243090 CDS NP_864111.1 32471118 1794032 complement(456326..457825) 1 NC_005027.1 PMID: 9371459 best DB hits: BLAST: swissprot:O27101; YA22_METTH BIOPOLYMER TRANSPORT PROTEIN; E=0.006 pir:G83274; probable tolQ-type transport protein PA2983 [imported] -; E=0.009 gb:AAD39910.1; AF119047_3 (AF119047) ExbB-like protein [Vibrio; E=0.013 COG: MTH1022; COG0811 Biopolymer transport proteins; E=6e-04 PFAM: PF01618; MotA/TolQ/ExbB proton channel famil; E=4.6e-05; biopolymer transport protein 457825 tolQ 1794032 tolQ Rhodopirellula baltica SH 1 biopolymer transport protein NP_864111.1 456326 R 243090 CDS NP_864112.1 32471119 1790560 457775..457945 1 NC_005027.1 hypothetical protein 457945 1790560 RB862 Rhodopirellula baltica SH 1 hypothetical protein NP_864112.1 457775 D 243090 CDS NP_864113.1 32471120 1795748 complement(457928..458119) 1 NC_005027.1 hypothetical protein 458119 1795748 RB863 Rhodopirellula baltica SH 1 hypothetical protein NP_864113.1 457928 R 243090 CDS NP_864114.1 32471121 1797089 458119..458598 1 NC_005027.1 hypothetical protein 458598 1797089 RB864 Rhodopirellula baltica SH 1 hypothetical protein NP_864114.1 458119 D 243090 CDS NP_864115.1 32471122 1795917 458731..460359 1 NC_005027.1 PMID: 8918248 best DB hits: BLAST: swissprot:P94661; EUO2_CHLPS EARLY UPSTREAM OPEN READING FRAME; E=0.25 swissprot:Q06566; EUO1_CHLPS EARLY UPSTREAM OPEN READING FRAME; E=0.42 swissprot:Q9Z7Z2; Y561_CHLPN HYPOTHETICAL PROTEIN CPN0561CP0189; E=0.44; hypothetical protein 460359 1795917 RB865 Rhodopirellula baltica SH 1 hypothetical protein NP_864115.1 458731 D 243090 CDS NP_864116.1 32471123 1796984 complement(460429..460731) 1 NC_005027.1 hypothetical protein 460731 1796984 RB867 Rhodopirellula baltica SH 1 hypothetical protein NP_864116.1 460429 R 243090 CDS NP_864117.1 32471124 1794861 460848..461063 1 NC_005027.1 signal peptide 461063 1794861 RB869 Rhodopirellula baltica SH 1 signal peptide NP_864117.1 460848 D 243090 CDS NP_864118.1 32471125 1791963 461164..462450 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 462450 1791963 RB870 Rhodopirellula baltica SH 1 signal peptide NP_864118.1 461164 D 243090 CDS NP_864119.1 32471126 1790301 complement(462534..463841) 1 NC_005027.1 PMID: 9537320 best DB hits: BLAST: pir:B70374; conserved hypothetical protein aq_854 - Aquifex aeolicus; E=0.002 COG: aq_854; COG0457 TPR-repeat-containing proteins; E=2e-04 PFAM: PF00515; TPR Domain; E=0.0063; hypothetical protein 463841 1790301 RB871 Rhodopirellula baltica SH 1 hypothetical protein NP_864119.1 462534 R 243090 CDS NP_864120.1 32471127 1795402 463836..464060 1 NC_005027.1 hypothetical protein 464060 1795402 RB873 Rhodopirellula baltica SH 1 hypothetical protein NP_864120.1 463836 D 243090 CDS NP_864121.1 32471128 1791204 464081..465733 1 NC_005027.1 PMID: 11481431; hypothetical protein 465733 1791204 RB874 Rhodopirellula baltica SH 1 hypothetical protein NP_864121.1 464081 D 243090 CDS NP_864122.1 32471129 1793362 complement(465702..467144) 1 NC_005027.1 best DB hits: BLAST: gb:AAD05531.1; (AF083240) c-type cytochrome precursor [Shewanella; E=0.024 gb:AAD05534.1; (AF083240) deca-heme c-type cytochrome [Shewanella; E=0.039; c-type cytochrome precursor 467144 mtrA 1793362 mtrA Rhodopirellula baltica SH 1 c-type cytochrome precursor NP_864122.1 465702 R 243090 CDS NP_864123.1 32471130 1791431 complement(467102..467422) 1 NC_005027.1 hypothetical protein 467422 1791431 RB879 Rhodopirellula baltica SH 1 hypothetical protein NP_864123.1 467102 R 243090 CDS NP_864124.1 32471131 1796483 467399..467755 1 NC_005027.1 signal peptide 467755 1796483 RB880 Rhodopirellula baltica SH 1 signal peptide NP_864124.1 467399 D 243090 CDS NP_864125.1 32471132 1793045 467780..468271 1 NC_005027.1 hypothetical protein 468271 1793045 RB883 Rhodopirellula baltica SH 1 hypothetical protein NP_864125.1 467780 D 243090 CDS NP_864126.1 32471133 1795935 468373..470172 1 NC_005027.1 hypothetical protein 470172 1795935 RB885 Rhodopirellula baltica SH 1 hypothetical protein NP_864126.1 468373 D 243090 CDS NP_864127.1 32471134 1792063 complement(470277..476306) 1 NC_005027.1 PMID: 96163873 best DB hits: BLAST: pir:S75200; fat protein - Synechocystis sp. (strain PCC 6803) -----; E=6e-43 embl:CAA60685.1; (X87241) homologue of Drosophila Fat protein [Homo; E=2e-33 gb:AAD20459.1; (AF100960) protocadherin [Rattus norvegicus]; E=4e-32 PFAM: PF00028; Cadherin domain; E=0.001; hypothetical protein 476306 1792063 RB886 Rhodopirellula baltica SH 1 hypothetical protein NP_864127.1 470277 R 243090 CDS NP_864128.1 32471135 1795612 476445..477704 1 NC_005027.1 PMID: 9884231 best DB hits: BLAST: pir:T28679; fibrinogen-binding protein homolog - Staphylococcus; E=0.003 embl:CAB75732.1; (Y18653) bone sialoprotein-binding protein; E=0.024 pir:T28680; fibrinogen-binding protein homolog - Staphylococcus; E=0.030; fibrinogen-binding protein 477704 1795612 RB893 Rhodopirellula baltica SH 1 fibrinogen-binding protein NP_864128.1 476445 D 243090 CDS NP_864129.1 32471136 1790831 complement(477738..477938) 1 NC_005027.1 hypothetical protein 477938 1790831 RB895 Rhodopirellula baltica SH 1 hypothetical protein NP_864129.1 477738 R 243090 CDS NP_864130.1 32471137 1791169 complement(477914..478597) 1 NC_005027.1 hypothetical protein 478597 1791169 RB896 Rhodopirellula baltica SH 1 hypothetical protein NP_864130.1 477914 R 243090 CDS NP_864131.1 32471138 1795449 477995..478672 1 NC_005027.1 hypothetical protein 478672 1795449 RB897 Rhodopirellula baltica SH 1 hypothetical protein NP_864131.1 477995 D 243090 CDS NP_864132.1 32471139 1794065 complement(478681..480243) 1 NC_005027.1 PMID: 20233298 PMID: 11743194 best DB hits: BLAST: gb:AAF30402.1; AF109924_1 (AF109924) sulfatase 1 precursor [Helix; E=0.009; sulfatase 1 precursor 480243 1794065 RB898 Rhodopirellula baltica SH 1 sulfatase 1 precursor NP_864132.1 478681 R 243090 CDS NP_864133.1 32471140 1796561 complement(480387..482858) 1 NC_005027.1 signal peptide 482858 1796561 RB900 Rhodopirellula baltica SH 1 signal peptide NP_864133.1 480387 R 243090 CDS NP_864134.1 32471141 1789899 complement(482976..483482) 1 NC_005027.1 best DB hits: PFAM: PF00036; EF hand; E=0.00036; hypothetical protein 483482 1789899 RB905 Rhodopirellula baltica SH 1 hypothetical protein NP_864134.1 482976 R 243090 CDS NP_864135.1 32471142 1791455 complement(483544..485055) 1 NC_005027.1 hypothetical protein 485055 1791455 RB908 Rhodopirellula baltica SH 1 hypothetical protein NP_864135.1 483544 R 243090 CDS NP_864136.1 32471143 1795690 complement(485013..485501) 1 NC_005027.1 PMID: 8052622 best DB hits: BLAST: swissprot:P45215; YE59_HAEIN PROBABLE RNA POLYMERASE SIGMA FACTOR; E=0.28 embl:CAB55836.1; (AJ249581) Sig15 protein [Streptomyces; E=0.38 pir:F81002; probable sigma factor, NMB2144 [imported] - Neisseria; E=0.79 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=5.8e-10; ECF-family RNA polymerase sigma factor 485501 1795690 RB912 Rhodopirellula baltica SH 1 ECF-family RNA polymerase sigma factor NP_864136.1 485013 R 243090 CDS NP_864137.1 32471144 1792571 485752..487095 1 NC_005027.1 hypothetical protein 487095 1792571 RB913 Rhodopirellula baltica SH 1 hypothetical protein NP_864137.1 485752 D 243090 CDS NP_864138.1 32471145 1791349 487115..487360 1 NC_005027.1 hypothetical protein 487360 1791349 RB916 Rhodopirellula baltica SH 1 hypothetical protein NP_864138.1 487115 D 243090 CDS NP_864139.1 32471146 1796007 487595..488473 1 NC_005027.1 PMID: 7607529 best DB hits: BLAST: swissprot:P55632; Y4QK_RHISN INTEGRASERECOMBINASE Y4QK; E=5e-30 prf:2115270D; integrase [Weeksella zoohelcum]; E=3e-29 swissprot:P55429; Y4EF_RHISN INTEGRASERECOMBINASE Y4EF; E=2e-28 COG: MTH893; COG0582 Integrase; E=4e-26 PFAM: PF00589; Phage integrase; E=2.8e-39; integrase 488473 1796007 RB918 Rhodopirellula baltica SH 1 integrase NP_864139.1 487595 D 243090 CDS NP_864140.1 32471147 1793815 complement(488470..488799) 1 NC_005027.1 hypothetical protein 488799 1793815 RB919 Rhodopirellula baltica SH 1 hypothetical protein NP_864140.1 488470 R 243090 CDS NP_864141.1 32471148 1797051 488758..489126 1 NC_005027.1 best DB hits: BLAST: gb:AAC23940.1; (U93274) FimV [Pseudomonas aeruginosa]; E=0.78; hypothetical protein 489126 1797051 RB921 Rhodopirellula baltica SH 1 hypothetical protein NP_864141.1 488758 D 243090 CDS NP_864142.1 32471149 1790056 489145..489258 1 NC_005027.1 hypothetical protein 489258 1790056 RB922 Rhodopirellula baltica SH 1 hypothetical protein NP_864142.1 489145 D 243090 CDS NP_864143.1 32471150 1796565 489282..489677 1 NC_005027.1 signal peptide 489677 1796565 RB923 Rhodopirellula baltica SH 1 signal peptide NP_864143.1 489282 D 243090 CDS NP_864144.1 32471151 1795972 complement(489774..490400) 1 NC_005027.1 hypothetical protein 490400 1795972 RB924 Rhodopirellula baltica SH 1 hypothetical protein NP_864144.1 489774 R 243090 CDS NP_864145.1 32471152 1795424 complement(490025..491152) 1 NC_005027.1 PMID: 9163424 best DB hits: BLAST: swissprot:P55631; Y4QJ_RHISN TRANSPOSASE Y4QJ -----; E=1e-38 prf:2115270C; transposase [Weeksella zoohelcum]; E=6e-35 pir:S23782; transposase tnpA (insertion sequence IS91) - Escherichia; E=4e-13; transposase 491152 1795424 RB925 Rhodopirellula baltica SH 1 transposase NP_864145.1 490025 R 243090 CDS NP_864146.1 32471153 1793532 complement(491254..491937) 1 NC_005027.1 PMID: 7607529 best DB hits: BLAST: swissprot:P55632; Y4QK_RHISN INTEGRASERECOMBINASE Y4QK; E=5e-23 swissprot:P55429; Y4EF_RHISN INTEGRASERECOMBINASE Y4EF; E=1e-22 prf:2115270D; integrase [Weeksella zoohelcum]; E=4e-15 COG: PAB0255; COG0582 Integrase; E=5e-15 PFAM: PF00589; Phage integrase; E=2.4e-13; integrase 491937 1793532 RB927 Rhodopirellula baltica SH 1 integrase NP_864146.1 491254 R 243090 CDS NP_864147.1 32471154 1791624 complement(492023..492148) 1 NC_005027.1 hypothetical protein 492148 1791624 RB930 Rhodopirellula baltica SH 1 hypothetical protein NP_864147.1 492023 R 243090 CDS NP_864148.1 32471155 1792469 492159..492278 1 NC_005027.1 hypothetical protein 492278 1792469 RB931 Rhodopirellula baltica SH 1 hypothetical protein NP_864148.1 492159 D 243090 CDS NP_864149.1 32471156 1790834 492306..492716 1 NC_005027.1 hypothetical protein 492716 1790834 RB932 Rhodopirellula baltica SH 1 hypothetical protein NP_864149.1 492306 D 243090 CDS NP_864150.1 32471157 1792135 complement(492825..493451) 1 NC_005027.1 hypothetical protein 493451 1792135 RB933 Rhodopirellula baltica SH 1 hypothetical protein NP_864150.1 492825 R 243090 CDS NP_864151.1 32471158 1796476 complement(493076..494203) 1 NC_005027.1 PMID: 7607529 best DB hits: BLAST: swissprot:P55631; Y4QJ_RHISN TRANSPOSASE Y4QJ -----; E=9e-39 prf:2115270C; transposase [Weeksella zoohelcum]; E=7e-35 pir:S23782; transposase tnpA (insertion sequence IS91) - Escherichia; E=4e-14; transposase 494203 1796476 RB934 Rhodopirellula baltica SH 1 transposase NP_864151.1 493076 R 243090 CDS NP_864152.1 32471159 1791713 complement(494267..494524) 1 NC_005027.1 hypothetical protein 494524 1791713 RB936 Rhodopirellula baltica SH 1 hypothetical protein NP_864152.1 494267 R 243090 CDS NP_864153.1 32471160 1792911 complement(494630..494833) 1 NC_005027.1 hypothetical protein 494833 1792911 RB938 Rhodopirellula baltica SH 1 hypothetical protein NP_864153.1 494630 R 243090 CDS NP_864154.1 32471161 1795417 complement(494838..496547) 1 NC_005027.1 best DB hits: PFAM: PF02012; BNR repeat; E=0.072; hypothetical protein 496547 1795417 RB940 Rhodopirellula baltica SH 1 hypothetical protein NP_864154.1 494838 R 243090 CDS NP_864155.1 32471162 1795136 complement(496342..498192) 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S75363; hypothetical protein sll1913 - Synechocystis sp. (strain; E=2e-04 pir:S76658; hypothetical protein - Synechocystis sp. (strain PCC; E=9e-04 embl:CAB62685.1; (AL133422) membrane protein.; E=0.002 PFAM: PF01593; Flavin containing amine oxidase; E=0.49 PF00070; Pyridine nucleotide-disulphide; E=0.14; hypothetical protein 498192 1795136 RB941 Rhodopirellula baltica SH 1 hypothetical protein NP_864155.1 496342 R 243090 CDS NP_864156.1 32471163 1795987 complement(498189..498341) 1 NC_005027.1 hypothetical protein 498341 1795987 RB943 Rhodopirellula baltica SH 1 hypothetical protein NP_864156.1 498189 R 243090 CDS NP_864157.1 32471164 1794421 complement(498338..500020) 1 NC_005027.1 PMID: 11785976 best DB hits: BLAST: ddbj:BAB05550.1; (AP001513) L-lactate permease [Bacillus; E=1e-116 pir:H82393; probable L-lactate permease VCA0983 [imported] - Vibrio; E=1e-105 ddbj:BAB03938.1; (AP001507) L-lactate permease [Bacillus; E=1e-102 COG: BH1831; COG1620 L-lactate permease; E=1e-117 PFAM: PF02652; L-lactate permease; E=1.9e-41; L-lactate permease 500020 lldP 1794421 lldP Rhodopirellula baltica SH 1 L-lactate permease NP_864157.1 498338 R 243090 CDS NP_864158.1 32471165 1794457 500121..500420 1 NC_005027.1 hypothetical protein 500420 1794457 RB949 Rhodopirellula baltica SH 1 hypothetical protein NP_864158.1 500121 D 243090 CDS NP_864159.1 32471166 1790488 complement(500437..501765) 1 NC_005027.1 PMID: 3146645 best DB hits: BLAST: swissprot:Q10858; YJ99_MYCTU HYPOTHETICAL 45.3 KDA TRANSPORT; E=2e-23 embl:CAB76881.1; (AL159139) amino acid transporter; E=2e-16 pir:G82809; amino acid transporter XF0408 [imported] - Xylella; E=3e-15 COG: Rv1999c; COG0531 Amino acid transporters; E=2e-24 BS_gabP; COG1113 Gamma-aminobutyrate and related permeases; E=2e-06 Rv3253c; COG0531 Amino acid transporters; E=4e-06 PFAM: PF00324; Amino acid permease; E=0.00042; amino acid transporter 501765 1790488 RB950 Rhodopirellula baltica SH 1 amino acid transporter NP_864159.1 500437 R 243090 CDS NP_864160.1 32471167 1793652 complement(501755..502459) 1 NC_005027.1 hypothetical protein 502459 1793652 RB951 Rhodopirellula baltica SH 1 hypothetical protein NP_864160.1 501755 R 243090 CDS NP_864161.1 32471168 1790809 502128..502904 1 NC_005027.1 hypothetical protein 502904 1790809 RB952 Rhodopirellula baltica SH 1 hypothetical protein NP_864161.1 502128 D 243090 CDS NP_864162.1 32471169 1790783 complement(502308..503045) 1 NC_005027.1 hypothetical protein 503045 1790783 RB953 Rhodopirellula baltica SH 1 hypothetical protein NP_864162.1 502308 R 243090 CDS NP_864163.1 32471170 1796760 503004..503387 1 NC_005027.1 hypothetical protein 503387 1796760 RB954 Rhodopirellula baltica SH 1 hypothetical protein NP_864163.1 503004 D 243090 CDS NP_864164.1 32471171 1790246 complement(503514..504140) 1 NC_005027.1 hypothetical protein 504140 1790246 RB955 Rhodopirellula baltica SH 1 hypothetical protein NP_864164.1 503514 R 243090 CDS NP_864165.1 32471172 1790837 complement(503765..504892) 1 NC_005027.1 PMID: 7607529 best DB hits: BLAST: swissprot:P55631; Y4QJ_RHISN TRANSPOSASE Y4QJ -----; E=7e-39 prf:2115270C; transposase [Weeksella zoohelcum]; E=6e-35 pir:S23782; transposase tnpA (insertion sequence IS91) - Escherichia; E=5e-14; transposase 504892 1790837 RB956 Rhodopirellula baltica SH 1 transposase NP_864165.1 503765 R 243090 CDS NP_864166.1 32471173 1794114 complement(504889..505476) 1 NC_005027.1 PMID: 7607529 best DB hits: BLAST: prf:2115270D; integrase [Weeksella zoohelcum]; E=7e-17 swissprot:P55632; Y4QK_RHISN INTEGRASERECOMBINASE Y4QK; E=9e-17 swissprot:P55429; Y4EF_RHISN INTEGRASERECOMBINASE Y4EF; E=5e-16 COG: PAB0255; COG0582 Integrase; E=5e-13 PFAM: PF00589; Phage integrase; E=2.6e-19; integrase 505476 1794114 RB957 Rhodopirellula baltica SH 1 integrase NP_864166.1 504889 R 243090 CDS NP_864167.1 32471174 1790542 complement(505439..505738) 1 NC_005027.1 hypothetical protein 505738 1790542 RB962 Rhodopirellula baltica SH 1 hypothetical protein NP_864167.1 505439 R 243090 CDS NP_864168.1 32471175 1795801 505900..506019 1 NC_005027.1 hypothetical protein 506019 1795801 RB963 Rhodopirellula baltica SH 1 hypothetical protein NP_864168.1 505900 D 243090 CDS NP_864169.1 32471176 1795441 506032..506475 1 NC_005027.1 hypothetical protein 506475 1795441 RB964 Rhodopirellula baltica SH 1 hypothetical protein NP_864169.1 506032 D 243090 CDS NP_864170.1 32471177 1796024 506479..506949 1 NC_005027.1 signal peptide 506949 1796024 RB965 Rhodopirellula baltica SH 1 signal peptide NP_864170.1 506479 D 243090 CDS NP_864171.1 32471178 1791814 complement(507068..507280) 1 NC_005027.1 hypothetical protein 507280 1791814 RB967 Rhodopirellula baltica SH 1 hypothetical protein NP_864171.1 507068 R 243090 CDS NP_864172.1 32471179 1793711 complement(507079..507840) 1 NC_005027.1 hypothetical protein 507840 1793711 RB968 Rhodopirellula baltica SH 1 hypothetical protein NP_864172.1 507079 R 243090 CDS NP_864173.1 32471180 1795499 507238..507945 1 NC_005027.1 signal peptide 507945 1795499 RB969 Rhodopirellula baltica SH 1 signal peptide NP_864173.1 507238 D 243090 CDS NP_864174.1 32471181 1790225 complement(508101..509411) 1 NC_005027.1 hypothetical protein 509411 1790225 RB971 Rhodopirellula baltica SH 1 hypothetical protein NP_864174.1 508101 R 243090 CDS NP_864175.1 32471182 1792506 complement(509484..511727) 1 NC_005027.1 PMID: 10809675 best DB hits: BLAST: gb:AAF72520.1; AF248951_1 (AF248951) mucin-desulfating sulfatase; E=1e-111 swissprot:Q29460; PA1G_BOVIN PLATELET-ACTIVATING FACTOR; E=4e-23 pdb:1ES9; A Chain A, X-Ray Crystal Structure Of R22k Mutant Of The; E=4e-23 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=4e-23 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=3e-04 yejM; COG3083 Predicted hydrolase of alkaline phosphatase; E=0.005 PFAM: PF00884; Sulfatase; E=2.8e-33 PF00657; Lipase/Acylhydrolase with GDSL-li; E=0.033 PF02266; Platelet activating factor acetyl; E=2.5e-24; mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase) 511727 1792506 RB973 Rhodopirellula baltica SH 1 mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase) NP_864175.1 509484 R 243090 CDS NP_864176.1 32471183 1795450 511880..512353 1 NC_005027.1 best DB hits: BLAST: pir:A82990; conserved hypothetical protein PA5247 [imported] -; E=2e-27 swissprot:P52089; YPAH_PSELE HYPOTHETICAL 21.7 KD PROTEIN IN PAHZ1; E=3e-26 pir:C64767; yaiI protein - Escherichia coli ----- gb:; E=4e-26 COG: PA5247; COG1671 Uncharacterized BCR; E=2e-28 PFAM: PF02639; Uncharacterized BCR, YaiI/YqxD; E=7e-46; hypothetical protein 512353 1795450 RB974 Rhodopirellula baltica SH 1 hypothetical protein NP_864176.1 511880 D 243090 CDS NP_864177.1 32471184 1791964 512471..516040 1 NC_005027.1 PMID: 9301118 best DB hits: BLAST: pir:G72219; conserved hypothetical protein - Thermotoga maritima; E=1e-40 ddbj:BAB06727.1; (AP001517) BH3008~unknown conserved protein; E=2e-36 pir:H71130; hypothetical protein PH0813 - Pyrococcus horikoshii; E=3e-26 COG: TM1723; COG1228 Imidazolonepropionase and related amidohydrolases; E=1e-41 BH0421; COG1820 N-acetylglucosamine-6-phosphate deacetylase; E=1e-04 VC1205; COG1228 Imidazolonepropionase and related amidohydrolases; E=3e-04 PFAM: PF02612; N-acetylglucosamine-6-phosphat; E=0.073 PF01979; Adenine deaminase; E=0.0022 PF00744; Dihydroorotase-like; E=0.48; N-acetylglucosamine-6-phosphate deacetylase 516040 nagA 1791964 nagA Rhodopirellula baltica SH 1 N-acetylglucosamine-6-phosphate deacetylase NP_864177.1 512471 D 243090 CDS NP_864178.1 32471185 1791534 516037..517344 1 NC_005027.1 PMID: 10192928 best DB hits: BLAST: ddbj:BAB06727.1; (AP001517) BH3008~unknown conserved protein; E=1e-19 pir:G72219; conserved hypothetical protein - Thermotoga maritima; E=3e-16 pir:G71130; hypothetical protein PH0812 - Pyrococcus horikoshii; E=2e-12 COG: BH3008; COG1228 Imidazolonepropionase and related amidohydrolases; E=1e-20 PFAM: PF01311; Bacterial export proteins, famil; E=0.13 PF02612; N-acetylglucosamine-6-phosphate; E=0.17; imidazolonepropionase 517344 1791534 RB981 Rhodopirellula baltica SH 1 imidazolonepropionase NP_864178.1 516037 D 243090 CDS NP_864179.1 32471186 1791569 517529..518806 1 NC_005027.1 PMID: 8063104 best DB hits: BLAST: swissprot:P54741; AFSK_STRCO SERINETHREONINE PROTEIN KINASE AFSK; E=0.001 embl:CAB88430.1; (AL353815) serinethreonine protein kinase; E=0.001 pir:H69064; serinethreonine protein kinase related protein -; E=0.001 COG: MTH1485; COG1520 Uncharacterized proteins of WD40-like repeat family; E=1e-04 PFAM: PF01011; PQQ enzyme repeat; E=0.77; serine/threonine protein kinase 518806 1791569 RB983 Rhodopirellula baltica SH 1 serine/threonine protein kinase NP_864179.1 517529 D 243090 CDS NP_864180.1 32471187 1797019 complement(518860..519990) 1 NC_005027.1 hypothetical protein 519990 1797019 RB988 Rhodopirellula baltica SH 1 hypothetical protein NP_864180.1 518860 R 243090 CDS NP_864181.1 32471188 1794537 520003..521505 1 NC_005027.1 PMID: 1517220 best DB hits: BLAST: pir:H75515; tetracycline-efflux transporter - Deinococcus; E=3e-68 swissprot:P02982; TCR1_ECOLI TETRACYCLINE RESISTANCE PROTEIN,; E=4e-52 ddbj:BAA96336.1; (AB043474) RK2 tetracycline resistance protein; E=8e-52 COG: DR0472; COG0477 Permeases of the major facilitator superfamily; E=3e-69 BS_ywfA; COG2814 Arabinose efflux permease; E=9e-06 bcr; COG0477 Permeases of the major facilitator superfamily; E=1e-05 PFAM: PF01587; Monocarboxylate transporter; E=0.45 PF00083; Sugar (and other) transporter; E=0.36; tetracycline-efflux transporter 521505 tetA 1794537 tetA Rhodopirellula baltica SH 1 tetracycline-efflux transporter NP_864181.1 520003 D 243090 CDS NP_864182.1 32471189 1797084 521502..522521 1 NC_005027.1 PMID: 8547173 best DB hits: BLAST: pir:E82632; NAD(P)H steroid dehydrogenase XF1825 [imported] -; E=7e-54 pir:H83099; probable oxidoreductase PA4361 [imported] - Pseudomonas; E=2e-39 gb:AAG11424.1; AC015449_6 (AC015449) Similar to steriod; E=3e-34 COG: XF1825; COG0451 Nucleoside-diphosphate-sugar epimerases; E=7e-55 BH1108; COG1087 UDP-glucose 4-epimerase; E=1e-08 Rv3464; COG1088 dTDP-D-glucose 4,6-dehydratase; E=1e-07 PFAM: PF01370; NAD dependent epimerase/dehydrat; E=0.087 PF00106; short chain dehydrogenase; E=0.038 PF00235; Profilin; E=0.88; 3-beta-hydroxysteroid dehydrogenase 522521 1797084 RB993 Rhodopirellula baltica SH 1 3-beta-hydroxysteroid dehydrogenase NP_864182.1 521502 D 243090 CDS NP_864183.1 32471190 1791868 complement(522493..523314) 1 NC_005027.1 signal peptide 523314 1791868 RB994 Rhodopirellula baltica SH 1 signal peptide NP_864183.1 522493 R 243090 CDS NP_864184.1 32471191 1790284 523512..525038 1 NC_005027.1 PMID: 9083067 best DB hits: COG: BH1262; COG0457 TPR-repeat-containing proteins; E=3e-05 PFAM: PF00533; BRCA1 C Terminus (BRCT) domain; E=7.9e-06 PF00515; TPR Domain; E=0.012; O-linked GlcNAc transferase 525038 ogt 1790284 ogt Rhodopirellula baltica SH 1 O-linked GlcNAc transferase NP_864184.1 523512 D 243090 CDS NP_864185.1 32471192 1794500 525099..527222 1 NC_005027.1 hypothetical protein 527222 1794500 RB1002 Rhodopirellula baltica SH 1 hypothetical protein NP_864185.1 525099 D 243090 CDS NP_864186.1 32471193 1791421 complement(527260..528696) 1 NC_005027.1 PMID: 11016950 best DB hits: BLAST: gb:AAG18863.1; (AE004989) Vng0271c [Halobacterium sp. NRC-1]; E=7e-30 gb:AAG45169.1; AF317883_1 (AF317883) unknown [Synechococcus sp.; E=8e-20 pir:T45180; hypothetical protein u1756l [imported] - Mycobacterium; E=0.026 COG: VNG0271C; COG0463 Glycosyltransferases involved in cell wall; E=7e-31; glycosyltransferase 528696 1791421 RB1005 Rhodopirellula baltica SH 1 glycosyltransferase NP_864186.1 527260 R 243090 CDS NP_864187.1 32471194 1795223 528696..529694 1 NC_005027.1 PMID: 11123673 best DB hits: BLAST: pir:A75484; conserved hypothetical protein - Deinococcus radiodurans; E=2e-24 pir:D72252; conserved hypothetical protein - Thermotoga maritima; E=1e-23 embl:CAB89843.1; (AJ251547) response regulator [Xanthomonas; E=2e-23 COG: DR0719; COG2206 HD-GYP domain; E=2e-25 PFAM: PF01966; HD domain; E=7.2e-08; response regulator 529694 1795223 RB1009 Rhodopirellula baltica SH 1 response regulator NP_864187.1 528696 D 243090 CDS NP_864188.1 32471195 1789964 529655..530116 1 NC_005027.1 hypothetical protein 530116 1789964 RB1010 Rhodopirellula baltica SH 1 hypothetical protein NP_864188.1 529655 D 243090 CDS NP_864189.1 32471196 1790011 530176..530328 1 NC_005027.1 hypothetical protein 530328 1790011 RB1012 Rhodopirellula baltica SH 1 hypothetical protein NP_864189.1 530176 D 243090 CDS NP_864190.1 32471197 1792597 complement(530325..534392) 1 NC_005027.1 PMID: 9384377 best DB hits: BLAST: pir:H69818; conserved hypothetical protein yhaN - Bacillus subtilis; E=7e-08 gb:AAC44802.1; (U21636) unknown [Staphylococcus aureus]; E=4e-06 pir:F72363; hypothetical protein - Thermotoga maritima (strain MSB8); E=0.005; hypothetical protein 534392 1792597 RB1013 Rhodopirellula baltica SH 1 hypothetical protein NP_864190.1 530325 R 243090 CDS NP_864191.1 32471198 1794857 531723..532391 1 NC_005027.1 hypothetical protein 532391 1794857 RB1015 Rhodopirellula baltica SH 1 hypothetical protein NP_864191.1 531723 D 243090 CDS NP_864192.1 32471199 1797015 complement(534374..535705) 1 NC_005027.1 PMID: 9384377 best DB hits: BLAST: pir:A69819; probable phosphoesterase (EC 3.1.-.-) yhaO - Bacillus; E=6e-12 COG: BS_yhaO; COG0420 DNA repair exonuclease; E=5e-13 PFAM: PF02549; DNA repair exonuclease; E=6.5e-05; DNA repair exonuclease 535705 1797015 RB1021 Rhodopirellula baltica SH 1 DNA repair exonuclease NP_864192.1 534374 R 243090 CDS NP_864193.1 32471200 1791683 complement(535760..536701) 1 NC_005027.1 PMID: 1482681 best DB hits: BLAST: embl:CAB59581.1; (AL132662) possible gluconolactonase precursor; E=1e-19 pir:B82698; gluconolactonase precursor XF1297 [imported] - Xylella; E=2e-19 pir:A75539; probable gluconolactonase - Deinococcus radiodurans; E=2e-16 COG: XF1297; COG3386 Uncharacterized protein; E=2e-20; gluconolactonase 536701 1791683 RB1022 Rhodopirellula baltica SH 1 gluconolactonase NP_864193.1 535760 R 243090 CDS NP_864194.1 32471201 1790228 complement(536965..538317) 1 NC_005027.1 PMID: 11157937 best DB hits: BLAST: pir:F71196; probable hexosyltransferase (EC 2.4.1.-) PH1844 -; E=1e-09 pir:T35150; probable glycosyl transferase - Streptomyces coelicolor; E=8e-09 swissprot:Q9R9N2; LPSB_RHIME LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS; E=3e-08 COG: PH1844; COG0438 Predicted glycosyltransferases; E=1e-10 PFAM: PF00534; Glycosyl transferases group 1; E=2.7e-25; hexosyltransferase 538317 1790228 RB1027 Rhodopirellula baltica SH 1 hexosyltransferase NP_864194.1 536965 R 243090 CDS NP_864195.1 32471202 1790176 538080..538883 1 NC_005027.1 hypothetical protein 538883 1790176 RB1029 Rhodopirellula baltica SH 1 hypothetical protein NP_864195.1 538080 D 243090 CDS NP_864196.1 32471203 1796524 539076..539978 1 NC_005027.1 hypothetical protein 539978 1796524 RB1033 Rhodopirellula baltica SH 1 hypothetical protein NP_864196.1 539076 D 243090 CDS NP_864197.1 32471204 1794182 539939..541381 1 NC_005027.1 hypothetical protein 541381 1794182 RB1036 Rhodopirellula baltica SH 1 hypothetical protein NP_864197.1 539939 D 243090 CDS NP_864198.2 161579037 1793846 541520..542800 1 NC_005027.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 542800 serS 1793846 serS Rhodopirellula baltica SH 1 seryl-tRNA synthetase NP_864198.2 541520 D 243090 CDS NP_864199.1 32471206 1796502 complement(542742..543053) 1 NC_005027.1 hypothetical protein 543053 1796502 RB1040 Rhodopirellula baltica SH 1 hypothetical protein NP_864199.1 542742 R 243090 CDS NP_864200.1 32471207 1795359 543083..543352 1 NC_005027.1 hypothetical protein 543352 1795359 RB1043 Rhodopirellula baltica SH 1 hypothetical protein NP_864200.1 543083 D 243090 CDS NP_864201.1 32471208 1790312 543422..544231 1 NC_005027.1 best DB hits: BLAST: pir:T36187; hypothetical protein SCE29.08c - Streptomyces coelicolor; E=6e-52 pir:T34934; hypothetical protein SC3F9.12 SC3F9.12 - Streptomyces; E=9e-47 swissprot:Q58778; YD83_METJA HYPOTHETICAL PROTEIN MJ1383 PRECURSOR; E=7e-19 COG: MJ1383; COG1099 Predicted metal-dependent hydrolases with the; E=6e-20; metal-dependent hydrolase 544231 1790312 RB1044 Rhodopirellula baltica SH 1 metal-dependent hydrolase NP_864201.1 543422 D 243090 CDS NP_864202.1 32471209 1791515 544232..546436 1 NC_005027.1 PMID: 7774596 PMID: 1938888 best DB hits: BLAST: pir:H75338; DNA helicase RecG - Deinococcus radiodurans (strain R1); E=1e-114 swissprot:Q55681; RECG_SYNY3 ATP-DEPENDENT DNA HELICASE RECG; E=1e-111 pir:G72405; ATP-dependent DNA helicase - Thermotoga maritima (strain; E=1e-109 COG: DR1916; COG1200 RecG-like helicases; E=1e-115 BS_mfd; COG1197 Transcription-repair coupling factor - superfamily; E=5e-56 sll0377; COG1197 Transcription-repair coupling factor - superfamily II; E=2e-54 PFAM: PF01336; OB-fold nucleic acid binding domai; E=0.13 PF00271; Helicase conserved C-terminal doma; E=0.0098 PF00270; DEAD/DEAH box helicase; E=2.9e-21; ATP-dependent DNA helicase RecG 546436 recG 1791515 recG Rhodopirellula baltica SH 1 ATP-dependent DNA helicase RecG NP_864202.1 544232 D 243090 CDS NP_864203.1 32471210 1794620 546446..546643 1 NC_005027.1 hypothetical protein 546643 1794620 RB1047 Rhodopirellula baltica SH 1 hypothetical protein NP_864203.1 546446 D 243090 CDS NP_864204.1 32471211 1793819 546640..547866 1 NC_005027.1 best DB hits: BLAST: pir:A69643; serine proteinase Do, heat-shock protein htrA - Bacillus; E=0.77 PFAM: PF00590; Tetrapyrrole (Corrin/Porphyri; E=0.39; signal peptide 547866 1793819 RB1048 Rhodopirellula baltica SH 1 signal peptide NP_864204.1 546640 D 243090 CDS NP_864205.1 32471212 1792273 547902..548189 1 NC_005027.1 hypothetical protein 548189 1792273 RB1050 Rhodopirellula baltica SH 1 hypothetical protein NP_864205.1 547902 D 243090 CDS NP_864206.1 32471213 1796029 548353..549528 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.014; hypothetical protein 549528 1796029 RB1052 Rhodopirellula baltica SH 1 hypothetical protein NP_864206.1 548353 D 243090 CDS NP_864207.1 32471214 1792327 complement(549506..549727) 1 NC_005027.1 hypothetical protein 549727 1792327 RB1056 Rhodopirellula baltica SH 1 hypothetical protein NP_864207.1 549506 R 243090 CDS NP_864208.1 32471215 1791757 complement(549724..549933) 1 NC_005027.1 hypothetical protein 549933 1791757 RB1057 Rhodopirellula baltica SH 1 hypothetical protein NP_864208.1 549724 R 243090 CDS NP_864209.1 32471216 1792729 550031..550912 1 NC_005027.1 signal peptide 550912 1792729 RB1059 Rhodopirellula baltica SH 1 signal peptide NP_864209.1 550031 D 243090 CDS NP_864210.1 32471217 1796300 complement(550990..553890) 1 NC_005027.1 hypothetical protein 553890 1796300 RB1060 Rhodopirellula baltica SH 1 hypothetical protein NP_864210.1 550990 R 243090 CDS NP_864211.1 32471218 1795554 554028..555143 1 NC_005027.1 PMID: 10086842 best DB hits: BLAST: pir:T04014; hypothetical protein F17A8.20 - Arabidopsis thaliana; E=4e-24 ddbj:BAB07562.1; (AP001520) oxidoreductase [Bacillus halodurans]; E=8e-21 gb:AAD39613.1; AC007454_12 (AC007454) Similar to gb D14605 AX110P; E=2e-20 COG: BH3843; COG0673 Predicted dehydrogenases and related proteins; E=8e-22 PFAM: PF01408; Oxidoreductase, NAD-bin; E=4.8e-38; oxidoreductase 555143 1795554 RB1063 Rhodopirellula baltica SH 1 oxidoreductase NP_864211.1 554028 D 243090 CDS NP_864212.1 32471219 1791729 555140..555457 1 NC_005027.1 PMID: 2574599 best DB hits: BLAST: swissprot:Q52905; GLNB_RHIME NITROGEN REGULATORY PROTEIN P-II; E=3e-18 gb:AAD56036.1; AF182395_2 (AF182395) P-II regulatory protein; E=1e-17 swissprot:P21193; GLNB_AZOBR NITROGEN REGULATORY PROTEIN P-II; E=1e-17 COG: NMB1995; COG0347 Nitrogen regulatory protein PII; E=7e-18 PFAM: PF00543; Nitrogen regulatory protein P-II; E=5.6e-25; nitrogen regulatory protein P-II 555457 glnB 1791729 glnB Rhodopirellula baltica SH 1 nitrogen regulatory protein P-II NP_864212.1 555140 D 243090 CDS NP_864213.1 32471220 1791923 complement(555508..557970) 1 NC_005027.1 hypothetical protein 557970 1791923 RB1066 Rhodopirellula baltica SH 1 hypothetical protein NP_864213.1 555508 R 243090 CDS NP_864214.1 32471221 1792497 complement(558070..558234) 1 NC_005027.1 hypothetical protein 558234 1792497 RB1072 Rhodopirellula baltica SH 1 hypothetical protein NP_864214.1 558070 R 243090 CDS NP_864215.1 32471222 1795083 558194..559255 1 NC_005027.1 PMID: 7921236 PMID: 9922273 best DB hits: BLAST: embl:CAB66286.1; (AL136519) bifunctional carbohydrate binding and; E=8e-26 swissprot:P36948; RBSC_BACSU RIBOSE TRANSPORT SYSTEM PERMEASE; E=1e-23 pir:S72834; hypothetical protein B1620_F2_68 - Mycobacterium leprae; E=2e-23 COG: BS_rbsC; COG1172 Ribose/xylose/arabinose/galactoside ABC-type; E=3e-23 yphD; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport; E=3e-23 VCA0129; COG1172 Ribose/xylose/arabinose/galactoside ABC-type; E=3e-23; ribose transport system permease 559255 rbsC 1795083 rbsC Rhodopirellula baltica SH 1 ribose transport system permease NP_864215.1 558194 D 243090 CDS NP_864216.1 32471223 1792954 559252..560544 1 NC_005027.1 hypothetical protein 560544 1792954 RB1077 Rhodopirellula baltica SH 1 hypothetical protein NP_864216.1 559252 D 243090 CDS NP_864217.1 32471224 1793194 560614..561939 1 NC_005027.1 PMID: 2997739 PMID: 2844237 best DB hits: BLAST: swissprot:O24706; KAD_SYNP6 ADENYLATE KINASE (ATP-AMP; E=3e-08 gb:AAC41513.1; (L47150) adenylate kinase [Neisseria meningitidis]; E=2e-07 swissprot:P49980; KAD_NEIMA ADENYLATE KINASE (ATP-AMP; E=2e-07 COG: NMB0823; COG0563 Adenylate kinase and related kinases; E=2e-08 PFAM: PF00406; Adenylate kinase; E=0.062; adenylate kinase 561939 adk 1793194 adk Rhodopirellula baltica SH 1 adenylate kinase NP_864217.1 560614 D 243090 CDS NP_864218.1 32471225 1792046 561926..562624 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB93401.1; (AL357524) hypothetical protein SCD12A.10c; E=2e-04 ddbj:BAB06409.1; (AP001516) BH2690~unknown [Bacillus halodurans]; E=0.002 pir:T09897; hypothetical protein T22A6.170 - Arabidopsis thaliana; E=0.038 COG: BH2690; COG0775 Nucleoside phosphorylase; E=2e-04; nucleoside phosphorylase 562624 1792046 RB1081 Rhodopirellula baltica SH 1 nucleoside phosphorylase NP_864218.1 561926 D 243090 CDS NP_864219.1 32471226 1794049 complement(562639..564681) 1 NC_005027.1 hypothetical protein 564681 1794049 RB1082 Rhodopirellula baltica SH 1 hypothetical protein NP_864219.1 562639 R 243090 CDS NP_864220.1 32471227 1795569 564890..565975 1 NC_005027.1 signal peptide 565975 1795569 RB1088 Rhodopirellula baltica SH 1 signal peptide NP_864220.1 564890 D 243090 CDS NP_864221.1 32471228 1792153 complement(565046..566227) 1 NC_005027.1 hypothetical protein 566227 1792153 RB1090 Rhodopirellula baltica SH 1 hypothetical protein NP_864221.1 565046 R 243090 CDS NP_864222.1 32471229 1794840 565978..567168 1 NC_005027.1 PMID: 1607366 best DB hits: BLAST: swissprot:P28793; FAOB_PSEFR FATTY OXIDATION COMPLEX ALPHA SUBUNIT; E=6e-27 pir:G83269; fatty-acid oxidation complex alpha-subunit PA3014; E=2e-25 pir:T34706; fatty acid oxidation complex alpha-subunit -; E=1e-24 COG: PA3014_2; COG1250 3-Hydroxyacyl-CoA dehydrogenase; E=2e-26 PFAM: PF02737; 3-hydroxyacyl-CoA dehydrogenase, NAD; E=6.3e-15 PF00725; 3-hydroxyacyl-CoA dehydrogenase, C-t; E=7.2e-14; fatty oxidation complex alpha subunit 567168 faoA 1794840 faoA Rhodopirellula baltica SH 1 fatty oxidation complex alpha subunit NP_864222.1 565978 D 243090 CDS NP_864223.1 32471230 1790911 complement(567152..567412) 1 NC_005027.1 hypothetical protein 567412 1790911 RB1093 Rhodopirellula baltica SH 1 hypothetical protein NP_864223.1 567152 R 243090 CDS NP_864224.1 32471231 1792408 567469..569046 1 NC_005027.1 hypothetical protein 569046 1792408 RB1095 Rhodopirellula baltica SH 1 hypothetical protein NP_864224.1 567469 D 243090 CDS NP_864225.1 32471232 1790474 complement(569067..570281) 1 NC_005027.1 PMID: 11889109; hypothetical protein 570281 1790474 RB1097 Rhodopirellula baltica SH 1 hypothetical protein NP_864225.1 569067 R 243090 CDS NP_864226.1 32471233 1791427 complement(570278..570778) 1 NC_005027.1 PMID: 2536679 best DB hits: BLAST: gb:AAF13662.1; AF188935_60 (AF188935) pXO2-57 [Bacillus anthracis]; E=2e-05 gb:AAB41842.1; (U60883) CapC [Bacillus firmus]; E=7e-04 pir:G70069; poly-gamma-glutamic synthesis pgsC protein - Bacillus; E=0.002; capsule biosynthesis protein CapC 570778 capC 1791427 capC Rhodopirellula baltica SH 1 capsule biosynthesis protein CapC NP_864226.1 570278 R 243090 CDS NP_864227.1 32471234 1791869 complement(570780..572105) 1 NC_005027.1 PMID: 2536679 best DB hits: BLAST: swissprot:P19580; CAPB_BACAN CAPB PROTEIN ----- pir: A30091; E=7e-53 gb:AAF13663.1; AF188935_61 (AF188935) pXO2-58 [Bacillus anthracis]; E=7e-53 pir:F70069; poly-gamma-glutamic synthesis pgsB protein - Bacillus; E=4e-50; capsule biosynthesis protein CapB 572105 capB 1791869 capB Rhodopirellula baltica SH 1 capsule biosynthesis protein CapB NP_864227.1 570780 R 243090 CDS NP_864228.1 32471235 1792883 572078..572257 1 NC_005027.1 hypothetical protein 572257 1792883 RB1104 Rhodopirellula baltica SH 1 hypothetical protein NP_864228.1 572078 D 243090 CDS NP_864229.1 32471236 1791488 572251..572367 1 NC_005027.1 hypothetical protein 572367 1791488 RB1105 Rhodopirellula baltica SH 1 hypothetical protein NP_864229.1 572251 D 243090 CDS NP_864230.1 32471237 1796127 572472..572615 1 NC_005027.1 hypothetical protein 572615 1796127 RB1106 Rhodopirellula baltica SH 1 hypothetical protein NP_864230.1 572472 D 243090 CDS NP_864231.1 32471238 1796568 complement(572592..572894) 1 NC_005027.1 hypothetical protein 572894 1796568 RB1107 Rhodopirellula baltica SH 1 hypothetical protein NP_864231.1 572592 R 243090 CDS NP_864232.1 32471239 1795059 complement(573002..573817) 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB58265.1; (AL121849) multi-domain protein; E=2e-24 embl:CAB45032.1; (AL078635) large multi-functional; E=3e-24 pir:T36423; probable large, multifunctional secreted protein -; E=0.003; hypothetical protein 573817 1795059 RB1109 Rhodopirellula baltica SH 1 hypothetical protein NP_864232.1 573002 R 243090 CDS NP_864233.1 32471240 1795206 complement(574507..574932) 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S75930; hypothetical protein - Synechocystis sp. (strain PCC; E=7e-09 pir:A57426; puc expression activator appA - Rhodobacter sphaeroides; E=4e-06 pir:H64861; hypothetical protein b1163 - Escherichia coli -----; E=3e-04; hypothetical protein 574932 1795206 RB1118 Rhodopirellula baltica SH 1 hypothetical protein NP_864233.1 574507 R 243090 CDS NP_864234.1 32471241 1795029 complement(575033..576988) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:B83071; hypothetical protein PA4592 [imported] - Pseudomonas; E=1e-04 PFAM: PF02321; Outer membrane efflux protein; E=0.00035; hypothetical protein 576988 1795029 RB1120 Rhodopirellula baltica SH 1 hypothetical protein NP_864234.1 575033 R 243090 CDS NP_864235.1 32471242 1796489 complement(576853..578202) 1 NC_005027.1 PMID: 8181764 best DB hits: BLAST: embl:CAA73293.1; (Y12758) prsE [Rhizobium leguminosarum]; E=3e-08 swissprot:P18790; HLYD_ACTAC LEUKOTOXIN SECRETION PROTEIN D; E=4e-08 embl:CAC06752.1; (AJ293261) protein transporter PrsE; E=2e-07 COG: PA1247; COG0845 Membrane-fusion protein; E=4e-08 aq_1060; COG1566 Multidrug resistance efflux pump; E=0.004; toxin secretion protein 578202 1796489 RB1122 Rhodopirellula baltica SH 1 toxin secretion protein NP_864235.1 576853 R 243090 CDS NP_864236.1 32471243 1794405 complement(578282..580393) 1 NC_005027.1 PMID: 8181764 best DB hits: BLAST: pir:H82381; toxin secretion ATP-binding protein VCA1084 [imported] -; E=2e-12 pir:S75806; hemolysin secretion protein hlyB - Synechocystis sp.; E=6e-12 gb:AAD21059.1; (AF119150) RtxB protein [Vibrio cholerae]; E=6e-12 COG: VCA1084; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain; E=2e-13 sll1180_2; COG2274 ABC-type bacteriocin/lantibiotic exporters,; E=5e-13 VC1448; COG1132 ABC-type multidrug/protein/lipid transport system,; E=6e-13 PFAM: PF00664; ABC transporter transmembrane re; E=0.046 PF00005; ABC transporter; E=6.8e-06; ABC transporter ATP-binding protein 580393 1794405 RB1125 Rhodopirellula baltica SH 1 ABC transporter ATP-binding protein NP_864236.1 578282 R 243090 CDS NP_864237.1 32471244 1797034 complement(580584..583271) 1 NC_005027.1 PMID: 10952301 best DB hits: BLAST: pir:H82182; conserved hypothetical protein VC1582 [imported] -; E=1e-112 pir:G70374; hypothetical protein aq_863 - Aquifex aeolicus -----; E=2e-70 pir:E69745; hypothetical protein ybcD - Bacillus subtilis -----; E=7e-63 COG: VC1582; COG3002 Uncharacterized BCR; E=1e-113; hypothetical protein 583271 1797034 RB1129 Rhodopirellula baltica SH 1 hypothetical protein NP_864237.1 580584 R 243090 CDS NP_864238.1 32471245 1796465 583247..583411 1 NC_005027.1 hypothetical protein 583411 1796465 RB1132 Rhodopirellula baltica SH 1 hypothetical protein NP_864238.1 583247 D 243090 CDS NP_864239.1 32471246 1795903 complement(583438..583629) 1 NC_005027.1 hypothetical protein 583629 1795903 RB1133 Rhodopirellula baltica SH 1 hypothetical protein NP_864239.1 583438 R 243090 CDS NP_864240.1 32471247 1795670 complement(583645..585258) 1 NC_005027.1 best DB hits: BLAST: pir:G82182; probable NADH dehydrogenase VC1581 [imported] - Vibrio; E=2e-42 gb:AAF27211.1; AF111731_1 (AF111731) NADH dehydrogenase [Ceiba; E=2e-39 gb:AAF27226.1; AF111746_1 (AF111746) NADH dehydrogenase; E=3e-39 COG: VC1581; COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L); E=1e-43 BS_shaA_1; COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain; E=1e-25 PFAM: PF00662; NADH-Ubiquinone oxidoreductase; E=0.0058 PF00361; NADH-Ubiquinone/plastoquinone; E=5.6e-38; NADH dehydrogenase 585258 ndhF 1795670 ndhF Rhodopirellula baltica SH 1 NADH dehydrogenase NP_864240.1 583645 R 243090 CDS NP_864241.1 32471248 1796290 585204..585488 1 NC_005027.1 hypothetical protein 585488 1796290 RB1137 Rhodopirellula baltica SH 1 hypothetical protein NP_864241.1 585204 D 243090 CDS NP_864242.1 32471249 1792621 585492..585959 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAC14481.1; (AL446003) hypothetical protein [Streptomyces; E=9e-15 pir:E64456; hypothetical protein MJ1254 - Methanococcus jannaschii; E=0.005 embl:CAC22761.1; (AL512944) hypothetical protein SC8D11.44c; E=0.035 PFAM: PF01037; AsnC family; E=0.66; hypothetical protein 585959 1792621 RB1138 Rhodopirellula baltica SH 1 hypothetical protein NP_864242.1 585492 D 243090 CDS NP_864243.1 32471250 1791000 complement(586045..586680) 1 NC_005027.1 PMID: 7699720 best DB hits: BLAST: embl:CAA03999.1; (AJ000330) Styrene response regulator; E=3e-15 gb:AAC23717.1; (AF031161) transcriptional activator [Pseudomonas; E=3e-15 gb:AAG09418.1; AF180147_10 (AF180147) response regulator TobT; E=5e-15 COG: PA4196; COG2197 Response regulators consisting of a CheY-like; E=3e-15 ygeK; COG2771 DNA-binding HTH domains; E=6e-07 DR0987; COG2197 Response regulators consisting of a CheY-like; E=1e-06 PFAM: PF00072; Response regulator receiver doma; E=2.4e-10 PF00196; Bacterial regulatory proteins, l; E=6.2e-20; response regulator 586680 1791000 RB1140 Rhodopirellula baltica SH 1 response regulator NP_864243.1 586045 R 243090 CDS NP_864244.1 32471251 1795111 complement(586652..587080) 1 NC_005027.1 signal peptide 587080 1795111 RB1142 Rhodopirellula baltica SH 1 signal peptide NP_864244.1 586652 R 243090 CDS NP_864245.1 32471252 1789946 587083..587517 1 NC_005027.1 hypothetical protein 587517 1789946 RB1143 Rhodopirellula baltica SH 1 hypothetical protein NP_864245.1 587083 D 243090 CDS NP_864246.1 32471253 1795243 complement(587487..587672) 1 NC_005027.1 hypothetical protein 587672 1795243 RB1144 Rhodopirellula baltica SH 1 hypothetical protein NP_864246.1 587487 R 243090 CDS NP_864247.1 32471254 1794962 587652..588896 1 NC_005027.1 PMID: 11823852 best DB hits: BLAST: pir:F83108; hypothetical protein PA4303 [imported] - Pseudomonas; E=0.26 gb:AAB90541.1; (AE001056) cell division inhibitor (minD-1); E=0.73 PFAM: PF00398; Ribosomal RNA adenine dimethylases; E=0.84; hypothetical protein 588896 1794962 RB1145 Rhodopirellula baltica SH 1 hypothetical protein NP_864247.1 587652 D 243090 CDS NP_864248.1 32471255 1794250 complement(588871..588984) 1 NC_005027.1 hypothetical protein 588984 1794250 RB1146 Rhodopirellula baltica SH 1 hypothetical protein NP_864248.1 588871 R 243090 CDS NP_864249.1 32471256 1793073 589001..590377 1 NC_005027.1 best DB hits: BLAST: gb:AAB36933.1; (U77780) secretory protein kinase [Chlorobium; E=1e-105 gb:AAF40195.1; AF229646_7 (AF229646) CpaF [Caulobacter crescentus]; E=2e-88 gb:AAG33866.1; AF317389_1 (AF317389) type IV NTPase; E=1e-86 COG: PA4302; COG0630 Predicted ATPases involved in pili and flagella; E=2e-79 PFAM: PF00004; ATPase associated with; E=0.16 PF01443; Viral (Superfamily 1) RNA hel; E=0.17 PF02223; Thymidylate kinase; E=0.69; secretory protein kinase 590377 1793073 RB1147 Rhodopirellula baltica SH 1 secretory protein kinase NP_864249.1 589001 D 243090 CDS NP_864250.1 32471257 1793240 590374..591318 1 NC_005027.1 PMID: 10880436 best DB hits: BLAST: gb:AAF40196.1; AF229646_8 (AF229646) TadB [Caulobacter crescentus]; E=9e-20 pir:D83108; hypothetical protein PA4301 [imported] - Pseudomonas; E=6e-11 embl:CAB92603.1; (AL356813) integral membrane protein; E=7e-06 COG: PA4301; COG2064 Predicted membrane protein; E=5e-12; hypothetical protein 591318 tadB 1793240 tadB Rhodopirellula baltica SH 1 hypothetical protein NP_864250.1 590374 D 243090 CDS NP_864251.1 32471258 1796602 591315..592256 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: pir:C83108; hypothetical protein PA4300 [imported] - Pseudomonas; E=1e-08 embl:CAB92604.1; (AL356813) integral membrane protein; E=3e-06 gb:AAK02931.1; (AE006123) TadC [Pasteurella multocida]; E=2e-04 COG: PAB1458; COG2064 Predicted membrane protein; E=6e-05; hypothetical protein 592256 1796602 RB1149 Rhodopirellula baltica SH 1 hypothetical protein NP_864251.1 591315 D 243090 CDS NP_864252.1 32471259 1791833 592253..592717 1 NC_005027.1 PMID: 11474104; signal peptide 592717 1791833 RB1153 Rhodopirellula baltica SH 1 signal peptide NP_864252.1 592253 D 243090 CDS NP_864253.1 32471260 1789902 592727..593200 1 NC_005027.1 hypothetical protein 593200 1789902 RB1154 Rhodopirellula baltica SH 1 hypothetical protein NP_864253.1 592727 D 243090 CDS NP_864254.1 32471261 1790792 593310..593525 1 NC_005027.1 hypothetical protein 593525 1790792 RB1155 Rhodopirellula baltica SH 1 hypothetical protein NP_864254.1 593310 D 243090 CDS NP_864255.1 32471262 1797085 593491..595290 1 NC_005027.1 hypothetical protein 595290 1797085 RB1156 Rhodopirellula baltica SH 1 hypothetical protein NP_864255.1 593491 D 243090 CDS NP_864256.1 32471263 1792367 complement(595387..597297) 1 NC_005027.1 best DB hits: BLAST: pir:T35404; probable squalene-hopene cyclase - Streptomyces; E=0.035 ddbj:BAB09653.1; (AB016881) gene_id:MXC17.10~unknown protein; E=0.073 gb:AAF80384.1; AF159949_1 (AF159949) cycloartenol synthase; E=0.79; squalene-hopene cyclase 597297 1792367 RB1161 Rhodopirellula baltica SH 1 squalene-hopene cyclase NP_864256.1 595387 R 243090 CDS NP_864257.1 32471264 1790788 complement(597316..597714) 1 NC_005027.1 PMID: 2670903 PMID: 10517598 best DB hits: BLAST: gb:AAC78852.1; (AF087669) ExbD [Bordetella bronchiseptica]; E=1e-06 pir:T44783; exbD protein [imported] - Bordetella pertussis -----; E=3e-06 pir:A71687; tolR protein (tolR) RP310 - Rickettsia prowazekii; E=3e-06 COG: RP310; COG0848 Biopolymer transport protein; E=4e-07 PFAM: PF02472; Biopolymer transport protein ExbD/To; E=4.1e-10; biopolymer transport ExbD protein 597714 exbD 1790788 exbD Rhodopirellula baltica SH 1 biopolymer transport ExbD protein NP_864257.1 597316 R 243090 CDS NP_864258.1 32471265 1790385 complement(597714..598769) 1 NC_005027.1 PMID: 8437515 best DB hits: BLAST: pir:D82726; conserved hypothetical protein XF1079 [imported] -; E=8e-21 pir:G83274; probable tolQ-type transport protein PA2983 [imported] -; E=4e-19 embl:CAB50918.1; (AJ243354) hypothetical protein [Pseudomonas; E=8e-16 COG: XF1079; COG0811 Biopolymer transport proteins; E=8e-22 PFAM: PF01618; MotA/TolQ/ExbB proton channel famil; E=3.1e-21; biopolymer transport ExbB-related protein 598769 exbB 1790385 exbB Rhodopirellula baltica SH 1 biopolymer transport ExbB-related protein NP_864258.1 597714 R 243090 CDS NP_864259.1 32471266 1793227 complement(598766..600994) 1 NC_005027.1 best DB hits: BLAST: pir:B81428; probable periplasmic protein Cj0114 [imported] -; E=0.62; hypothetical protein 600994 1793227 RB1168 Rhodopirellula baltica SH 1 hypothetical protein NP_864259.1 598766 R 243090 CDS NP_864260.1 32471267 1791122 complement(600826..602079) 1 NC_005027.1 PMID: 2104607 best DB hits: BLAST: swissprot:P15263; DEGT_BACST PLEIOTROPIC REGULATORY PROTEIN; E=2e-80 ddbj:BAA31964.1; (D64132) A porR mutant of Pophyromonas; E=3e-68 pir:D69025; pleiotropic regulatory protein DegT - Methanobacterium; E=2e-67 COG: MTH1188; COG0399 Predicted pyridoxal phosphate-dependent enzyme; E=2e-68 PFAM: PF01041; DegT/DnrJ/EryC1/StrS family; E=1.2e-146; pleiotropic regulatory protein 602079 degT 1791122 degT Rhodopirellula baltica SH 1 pleiotropic regulatory protein NP_864260.1 600826 R 243090 CDS NP_864261.1 32471268 1796165 complement(602343..602987) 1 NC_005027.1 hypothetical protein 602987 1796165 RB1172 Rhodopirellula baltica SH 1 hypothetical protein NP_864261.1 602343 R 243090 CDS NP_864262.1 32471269 1794873 603031..603498 1 NC_005027.1 signal peptide 603498 1794873 RB1174 Rhodopirellula baltica SH 1 signal peptide NP_864262.1 603031 D 243090 CDS NP_864263.1 32471270 1790447 complement(603172..603621) 1 NC_005027.1 hypothetical protein 603621 1790447 RB1175 Rhodopirellula baltica SH 1 hypothetical protein NP_864263.1 603172 R 243090 CDS NP_864264.1 32471271 1795540 complement(603844..604059) 1 NC_005027.1 PMID: 7492116 best DB hits: BLAST: ddbj:BAB12601.1; (AP002527) The peptide is not translated beyond; E=1e-04 gb:AAK01408.1; AF324211_1 (AF324211) site-specific tyrosine; E=2e-04 pir:C82476; site-specific recombinase IntI4 VCA0291 [imported] -; E=2e-04 COG: VCA0291; COG0582 Integrase; E=3e-05 PFAM: PF00589; Phage integrase; E=0.02; integrase 604059 1795540 RB1178 Rhodopirellula baltica SH 1 integrase NP_864264.1 603844 R 243090 CDS NP_864265.1 32471272 1789912 603998..604384 1 NC_005027.1 hypothetical protein 604384 1789912 RB1179 Rhodopirellula baltica SH 1 hypothetical protein NP_864265.1 603998 D 243090 CDS NP_864266.1 32471273 1790144 604378..604656 1 NC_005027.1 hypothetical protein 604656 1790144 RB1180 Rhodopirellula baltica SH 1 hypothetical protein NP_864266.1 604378 D 243090 CDS NP_864267.1 32471274 1795548 604706..604972 1 NC_005027.1 hypothetical protein 604972 1795548 RB1182 Rhodopirellula baltica SH 1 hypothetical protein NP_864267.1 604706 D 243090 CDS NP_864268.1 32471275 1795735 605059..605553 1 NC_005027.1 hypothetical protein 605553 1795735 RB1183 Rhodopirellula baltica SH 1 hypothetical protein NP_864268.1 605059 D 243090 CDS NP_864269.1 32471276 1793125 complement(605675..605971) 1 NC_005027.1 hypothetical protein 605971 1793125 RB1184 Rhodopirellula baltica SH 1 hypothetical protein NP_864269.1 605675 R 243090 CDS NP_864270.1 32471277 1790201 complement(605975..606781) 1 NC_005027.1 PMID: 1646375 best DB hits: BLAST: prf:2115270C; transposase [Weeksella zoohelcum]; E=1e-16 swissprot:P55631; Y4QJ_RHISN TRANSPOSASE Y4QJ -----; E=7e-11 swissprot:P24607; T801_PSESH TRANSPOSASE FOR INSERTION SEQUENCE; E=0.38 PFAM: PF01096; Transcription factor S-II (TFIIS); E=0.19; transposase 606781 1790201 RB1185 Rhodopirellula baltica SH 1 transposase NP_864270.1 605975 R 243090 CDS NP_864271.1 32471278 1794703 606838..607128 1 NC_005027.1 PMID: 2824781 best DB hits: BLAST: gb:AAG58100.1; AE005527_3 (AE005527) unknown protein encoded by; E=0.002 gb:AAG53987.1; AF327445_1 (AF327445) transposase A; E=0.003 gb:AAF28119.1; AF153317_15 (AF153317) InsA [Shigella; E=0.007 COG: PA1937; COG2963 Transposase; E=0.004 PFAM: PF01381; Helix-turn-helix; E=0.53 PF01527; Transposase; E=6.1e-18; transposase A 607128 1794703 RB1189 Rhodopirellula baltica SH 1 transposase A NP_864271.1 606838 D 243090 CDS NP_864272.1 32471279 1794928 607131..608009 1 NC_005027.1 PMID: 7496528 best DB hits: BLAST: gb:AAA88919.1; (U13013) ORFB [Leptospira interrogans]; E=3e-47 gb:AAA88916.1; (U13012) ORFB [Leptospira interrogans]; E=1e-46 gb:AAC05649.1; (AF038931) probable transposase-related protein; E=1e-45 COG: DRB0019.2; COG2801 transposase; E=1e-35 PFAM: PF00665; Integrase core domain; E=4.8e-40; transposase 608009 1794928 RB1190 Rhodopirellula baltica SH 1 transposase NP_864272.1 607131 D 243090 CDS NP_864273.1 32471280 1796749 complement(608055..608435) 1 NC_005027.1 best DB hits: BLAST: swissprot:P55631; Y4QJ_RHISN TRANSPOSASE Y4QJ -----; E=4e-14 prf:2115270C; transposase [Weeksella zoohelcum]; E=2e-10 pir:S49612; transposase - Escherichia coli; E=0.001; transposase 608435 1796749 RB1191 Rhodopirellula baltica SH 1 transposase NP_864273.1 608055 R 243090 CDS NP_864274.1 32471281 1794402 complement(608450..609496) 1 NC_005027.1 PMID: 9082984 best DB hits: BLAST: swissprot:P55632; Y4QK_RHISN INTEGRASERECOMBINASE Y4QK; E=5e-39 swissprot:P55429; Y4EF_RHISN INTEGRASERECOMBINASE Y4EF; E=1e-32 prf:2115270D; integrase [Weeksella zoohelcum]; E=1e-22 COG: PAB0255; COG0582 Integrase; E=3e-21 PFAM: PF02899; Phage integrase, N-terminal S; E=0.087 PF00589; Phage integrase; E=8e-31; integrase 609496 1794402 RB1192 Rhodopirellula baltica SH 1 integrase NP_864274.1 608450 R 243090 CDS NP_864275.1 32471282 1794242 complement(609563..609694) 1 NC_005027.1 hypothetical protein 609694 1794242 RB1193 Rhodopirellula baltica SH 1 hypothetical protein NP_864275.1 609563 R 243090 CDS NP_864276.1 32471283 1793293 complement(609661..610227) 1 NC_005027.1 hypothetical protein 610227 1793293 RB1194 Rhodopirellula baltica SH 1 hypothetical protein NP_864276.1 609661 R 243090 CDS NP_864277.1 32471284 1796297 610360..610857 1 NC_005027.1 PMID: 11792869 best DB hits: BLAST: pir:S56597; peptide N-acetyltransferase (EC 2.3.1.-) rimI -; E=0.018 swissprot:P09453; RIMI_ECOLI RIBOSOMAL-PROTEIN-ALANINE; E=0.018 pir:G69233; N-terminal acetyltransferase complex, subunit ARD1 -; E=0.043 COG: rimI; COG0456 Acetyltransferases; E=0.002 DR0188; COG0454 Histone acetyltransferase HPA2 and related; E=0.007 PFAM: PF00583; Acetyltransferase (GNAT) family; E=1e-16; ribosomal-protein-alanine acetyltransferase 610857 1796297 RB1196 Rhodopirellula baltica SH 1 ribosomal-protein-alanine acetyltransferase NP_864277.1 610360 D 243090 CDS NP_864278.1 32471285 1793553 610941..611396 1 NC_005027.1 signal peptide 611396 1793553 RB1198 Rhodopirellula baltica SH 1 signal peptide NP_864278.1 610941 D 243090 CDS NP_864279.1 32471286 1795171 611479..612024 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:C75507; hypothetical protein - Deinococcus radiodurans (strain; E=0.44; type IV pilin-like protein 612024 1795171 RB1199 Rhodopirellula baltica SH 1 type IV pilin-like protein NP_864279.1 611479 D 243090 CDS NP_864280.1 32471287 1791735 612144..612635 1 NC_005027.1 signal peptide 612635 1791735 RB1200 Rhodopirellula baltica SH 1 signal peptide NP_864280.1 612144 D 243090 CDS NP_864281.1 32471288 1794338 complement(612629..612754) 1 NC_005027.1 hypothetical protein 612754 1794338 RB1201 Rhodopirellula baltica SH 1 hypothetical protein NP_864281.1 612629 R 243090 CDS NP_864282.1 32471289 1793944 612786..613154 1 NC_005027.1 PMID: 10496929 best DB hits: BLAST: gb:AAG56925.1; AE005414_2 (AE005414) IS30 transposase encoded; E=1e-10 ddbj:BAA84890.1; (AB024946) Transposase [Escherichia coli]; E=2e-10 pir:S28740; probable transposase (insertion sequence IS30) -; E=2e-10 COG: tra8_g1; COG2826 Transposase, IS30 family; E=2e-11 PFAM: PF01325; Iron dependent repressor, N-t; E=0.17 PF01381; Helix-turn-helix; E=0.086 PF01047; MarR family; E=0.42; transposase 613154 1793944 RB1202 Rhodopirellula baltica SH 1 transposase NP_864282.1 612786 D 243090 CDS NP_864283.1 32471290 1796732 complement(613202..613408) 1 NC_005027.1 hypothetical protein 613408 1796732 RB1203 Rhodopirellula baltica SH 1 hypothetical protein NP_864283.1 613202 R 243090 CDS NP_864284.1 32471291 1789997 complement(613431..613703) 1 NC_005027.1 hypothetical protein 613703 1789997 RB1204 Rhodopirellula baltica SH 1 hypothetical protein NP_864284.1 613431 R 243090 CDS NP_864285.1 32471292 1793421 complement(613667..615037) 1 NC_005027.1 PMID: 93315172 best DB hits: BLAST: gb:AAA37880.1; (L07921) iduronate sulfatase [Mus musculus]; E=1e-36 gb:AAA16877.1; (L13329) iduronate-2-sulfatase [Homo sapiens]; E=2e-35 gb:AAB33747.1; iduronate-2-sulfatase, IDS {EC 3.1.6.13} [human,; E=1e-34 COG: PA0031; COG3119 Arylsulfatase A and related enzymes; E=5e-29 PA1689; COG1368 Phosphoglycerol transferase and related proteins,; E=2e-04 PFAM: PF00884; Sulfatase; E=1.4e-18; iduronate sulfatase 615037 1793421 RB1205 Rhodopirellula baltica SH 1 iduronate sulfatase NP_864285.1 613667 R 243090 CDS NP_864286.1 32471293 1791724 615506..616456 1 NC_005027.1 signal peptide 616456 1791724 RB1208 Rhodopirellula baltica SH 1 signal peptide NP_864286.1 615506 D 243090 CDS NP_864287.1 32471294 1792653 complement(616571..617416) 1 NC_005027.1 PMID: 7610040 best DB hits: BLAST: swissprot:Q58707; YD11_METJA HYPOTHETICAL PROTEIN MJ1311 -----; E=0.004 swissprot:P39305; SGAU_ECOLI HEXULOSE-6-PHOSPHATE; E=0.004 gb:AAG59393.1; AE005652_10 (AE005652) ; E=0.004 COG: MJ1311; COG1082 Predicted endonucleases; E=4e-04 PFAM: PF02199; Saposin A-type domain; E=0.63; hexulose-6-phosphate isomerase 617416 sgaU 1792653 sgaU Rhodopirellula baltica SH 1 hexulose-6-phosphate isomerase NP_864287.1 616571 R 243090 CDS NP_864288.1 32471295 1790195 617437..617550 1 NC_005027.1 hypothetical protein 617550 1790195 RB1211 Rhodopirellula baltica SH 1 hypothetical protein NP_864288.1 617437 D 243090 CDS NP_864289.1 32471296 1792695 complement(617517..618866) 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S77552; Mg2+ transport protein - Synechocystis sp. (strain PCC; E=8e-53 pir:B71265; probable Mg2+ transport protein (mgtE) - syphilis; E=2e-51 pir:G72287; hypothetical protein TM1161 - Thermotoga maritima; E=4e-49 COG: slr1216; COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain); E=7e-54 MTH855_2; COG0517 CBS domains; E=7e-09 PFAM: PF00571; CBS domain; E=0.0001 PF01769; Divalent cation transporter; E=6.8e-26; Mg2+ transport protein 618866 mgtE 1792695 mgtE Rhodopirellula baltica SH 1 Mg2+ transport protein NP_864289.1 617517 R 243090 CDS NP_864290.1 32471297 1793094 complement(618945..619532) 1 NC_005027.1 elongation factor P 619532 efp 1793094 efp Rhodopirellula baltica SH 1 elongation factor P NP_864290.1 618945 R 243090 CDS NP_864291.1 32471298 1794648 619560..620705 1 NC_005027.1 best DB hits: BLAST: pir:C82554; conserved hypothetical protein XF2474 [imported] -; E=7e-72 gb:AAG59345.1; AE005648_7 (AE005648) orf, hypothetical protein; E=4e-70 swissprot:P39280; YJEK_ECOLI HYPOTHETICAL 38.7 KD PROTEIN IN; E=1e-67 COG: XF2474; COG1509 Lysine 2,3-aminomutase; E=7e-73 PFAM: PF02587; Uncharacterized ACR, YjeK family COG; E=6e-109; L-lysine 2,3-aminomutase 620705 kamA 1794648 kamA Rhodopirellula baltica SH 1 L-lysine 2,3-aminomutase NP_864291.1 619560 D 243090 CDS NP_864292.1 32471299 1795079 620722..622605 1 NC_005027.1 PMID: 9403685 best DB hits: BLAST: pir:H70193; membrane spanning protein homolog - Lyme disease; E=6e-04 gb:AAD39630.1; AF033858_13 (AF033858) ABC transporter; E=0.074 pir:D69049; conserved hypothetical protein MTH1371 -; E=0.15 COG: BB0753; COG1277 Permease component of an ABC-transporter; E=5e-05; ABC transporter permease 622605 1795079 RB1216 Rhodopirellula baltica SH 1 ABC transporter permease NP_864292.1 620722 D 243090 CDS NP_864293.1 32471300 1790949 622840..623925 1 NC_005027.1 PMID: 3531172 best DB hits: BLAST: swissprot:P05149; GALM_ACICA ALDOSE 1-EPIMERASE PRECURSOR; E=4e-63 embl:CAB62739.1; (AL133423) aldose 1-epimerase; E=3e-62 pir:H72395; probable aldose 1-epimerase (EC 5.1.3.3) - Thermotoga; E=5e-62 COG: TM0282; COG2017 Galactose mutarotase and related enzymes; E=4e-63 PFAM: PF01263; Aldose 1-epimerase; E=1.4e-102; aldose 1-epimerase 623925 galM 1790949 galM Rhodopirellula baltica SH 1 aldose 1-epimerase NP_864293.1 622840 D 243090 CDS NP_864294.1 32471301 1793304 623906..624094 1 NC_005027.1 hypothetical protein 624094 1793304 RB1222 Rhodopirellula baltica SH 1 hypothetical protein NP_864294.1 623906 D 243090 CDS NP_864295.1 32471302 1794443 624091..624312 1 NC_005027.1 hypothetical protein 624312 1794443 RB1223 Rhodopirellula baltica SH 1 hypothetical protein NP_864295.1 624091 D 243090 CDS NP_864296.1 32471303 1794682 624415..624528 1 NC_005027.1 hypothetical protein 624528 1794682 RB1224 Rhodopirellula baltica SH 1 hypothetical protein NP_864296.1 624415 D 243090 CDS NP_864297.1 32471304 1794490 complement(624513..627017) 1 NC_005027.1 PMID: 7793970 best DB hits: BLAST: pir:S66261; X-Pro dipeptidyl-peptidase (EC 3.4.14.11) -; E=6e-59 ddbj:BAA28265.1; (AB008194) DPP IV [Porphyromonas gingivalis]; E=2e-54 gb:AAC46184.1; (AF026511) dipeptidyl peptidase IV [Porphyromonas; E=7e-54 COG: YHR028c; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; E=2e-30 BH0879; COG2267 Lysophospholipase; E=0.002 PH0863; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; E=0.002 PFAM: PF00930; Dipeptidyl peptidase IV (DPP IV); E=5.3e-44 PF00326; Prolyl oligopeptidase; E=0.84; dipeptidyl peptidase IV 627017 dpp4 1794490 dpp4 Rhodopirellula baltica SH 1 dipeptidyl peptidase IV NP_864297.1 624513 R 243090 CDS NP_864298.1 32471305 1790367 complement(626975..627328) 1 NC_005027.1 hypothetical protein 627328 1790367 RB1230 Rhodopirellula baltica SH 1 hypothetical protein NP_864298.1 626975 R 243090 CDS NP_864299.1 32471306 1794899 complement(627346..628773) 1 NC_005027.1 PMID: 6352260 PMID: 2211531 best DB hits: BLAST: pir:A82753; dihydrolipoamide dehydrogenase XF0868 [imported] -; E=1e-102 swissprot:O50286; DLDH_VIBPA DIHYDROLIPOAMIDE DEHYDROGENASE (E3; E=1e-102 swissprot:P00391; DLDH_ECOLI DIHYDROLIPOAMIDE DEHYDROGENASE (E3; E=1e-101 COG: XF0868_2; COG1249 Dihydrolipoamide dehydrogenase/glutathione; E=1e-103 PFAM: PF02032; Phytoene dehydrogenase related; E=0.00021 PF00070; Pyridine nucleotide-disulphide; E=2.6e-75 PF02852; Pyridine nucleotide-disulphide; E=8.6e-41; dihydrolipoamide dehydrogenase 628773 lpd 1794899 lpd Rhodopirellula baltica SH 1 dihydrolipoamide dehydrogenase NP_864299.1 627346 R 243090 CDS NP_864300.1 32471307 1792915 628776..628901 1 NC_005027.1 hypothetical protein 628901 1792915 RB1232 Rhodopirellula baltica SH 1 hypothetical protein NP_864300.1 628776 D 243090 CDS NP_864301.1 32471308 1793948 complement(628870..629490) 1 NC_005027.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 629490 rpsD 1793948 rpsD Rhodopirellula baltica SH 1 30S ribosomal protein S4 NP_864301.1 628870 R 243090 CDS NP_864302.1 32471309 1793366 complement(629787..631169) 1 NC_005027.1 PMID: 10192928 best DB hits: BLAST: ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=1e-11 gb:AAC23913.1; (AF039207) NADH-dependent dehydrogenase homolog; E=2e-10 pir:G72391; conserved hypothetical protein - Thermotoga maritima; E=6e-08 COG: BH1248; COG0673 Predicted dehydrogenases and related proteins; E=1e-12 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=9.8e-25; NADH-dependent dehydrogenase 631169 1793366 RB1235 Rhodopirellula baltica SH 1 NADH-dependent dehydrogenase NP_864302.1 629787 R 243090 CDS NP_864303.1 32471310 1794585 complement(631142..631471) 1 NC_005027.1 hypothetical protein 631471 1794585 RB1237 Rhodopirellula baltica SH 1 hypothetical protein NP_864303.1 631142 R 243090 CDS NP_864304.1 32471311 1792040 complement(631540..632046) 1 NC_005027.1 PMID: 9753770 best DB hits: BLAST: gb:AAC36151.1; (U58977) Notch homolog Scalloped wings [Lucilia; E=0.30; notch-like protein 632046 1792040 RB1238 Rhodopirellula baltica SH 1 notch-like protein NP_864304.1 631540 R 243090 CDS NP_864305.1 32471312 1793898 complement(632033..632500) 1 NC_005027.1 hypothetical protein 632500 1793898 RB1239 Rhodopirellula baltica SH 1 hypothetical protein NP_864305.1 632033 R 243090 CDS NP_864306.1 32471313 1796002 complement(632546..634060) 1 NC_005027.1 best DB hits: BLAST: embl:CAB94634.1; (AL359215) secreted glycosyl hydrolase.; E=0.005 pir:D83161; hypothetical protein PA3885 [imported] - Pseudomonas; E=0.010 pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=0.37 COG: PA3885; COG2365 Protein tyrosine/serine phosphatase; E=0.001 PFAM: PF00239; Resolvase class of site-specific re; E=0.14; secreted glycosyl hydrolase 634060 1796002 RB1240 Rhodopirellula baltica SH 1 secreted glycosyl hydrolase NP_864306.1 632546 R 243090 CDS NP_864307.1 32471314 1796535 complement(634145..634567) 1 NC_005027.1 hypothetical protein 634567 1796535 RB1246 Rhodopirellula baltica SH 1 hypothetical protein NP_864307.1 634145 R 243090 CDS NP_864308.1 32471315 1795133 634500..635303 1 NC_005027.1 PMID: 7476193 best DB hits: BLAST: pir:S76626; ABC-type transport protein sll0489 - Synechocystis sp.; E=2e-52 pir:A83142; probable ATP-binding component of ABC transporter PA4037; E=6e-50 pir:T44443; gliding motility protein [imported] - Flavobacterium; E=1e-49 COG: sll0489; COG1131 ABC-type multidrug transport system, ATPase; E=2e-53 ybhF; COG1131 ABC-type multidrug transport system, ATPase component; E=1e-33 VNG1893G; COG1131 ABC-type multidrug transport system, ATPase; E=2e-33 PFAM: PF00005; ABC transporter; E=9.2e-47; ABC-type multidrug transport system, ATPase component 635303 1795133 RB1248 Rhodopirellula baltica SH 1 ABC-type multidrug transport system, ATPase component NP_864308.1 634500 D 243090 CDS NP_864309.1 32471316 1795894 635417..638389 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:B83188; probable permease of ABC transporter PA3671 [imported] -; E=7e-21 pir:B83142; hypothetical protein PA4038 [imported] - Pseudomonas; E=3e-17 pir:H70193; membrane spanning protein homolog - Lyme disease; E=1e-12 COG: PA3671; COG1277 Permease component of an ABC-transporter; E=6e-22 PA4039; COG3225 Uncharacterized BCR; E=1e-04 PH1531; COG1668 ATP-dependent Na+ efflux pump membrane component; E=0.002; ABC transporter permease 638389 1795894 RB1250 Rhodopirellula baltica SH 1 ABC transporter permease NP_864309.1 635417 D 243090 CDS NP_864310.1 32471317 1791391 638429..640426 1 NC_005027.1 best DB hits: BLAST: pir:H83187; hypothetical protein PA3669 [imported] - Pseudomonas; E=0.14; hypothetical protein 640426 1791391 RB1252 Rhodopirellula baltica SH 1 hypothetical protein NP_864310.1 638429 D 243090 CDS NP_864311.1 32471318 1790764 640610..640747 1 NC_005027.1 hypothetical protein 640747 1790764 RB1254 Rhodopirellula baltica SH 1 hypothetical protein NP_864311.1 640610 D 243090 CDS NP_864312.1 32471319 1794779 complement(640755..640910) 1 NC_005027.1 hypothetical protein 640910 1794779 RB1255 Rhodopirellula baltica SH 1 hypothetical protein NP_864312.1 640755 R 243090 CDS NP_864313.1 32471320 1795084 complement(640889..641044) 1 NC_005027.1 hypothetical protein 641044 1795084 RB1256 Rhodopirellula baltica SH 1 hypothetical protein NP_864313.1 640889 R 243090 CDS NP_864314.1 32471321 1790238 complement(641119..642246) 1 NC_005027.1 PMID: 10470850 best DB hits: BLAST: ddbj:BAB09588.1; (AB018118) gene_id:MRI1.6~pir D64592~similar to; E=1e-46; hypothetical protein 642246 1790238 RB1257 Rhodopirellula baltica SH 1 hypothetical protein NP_864314.1 641119 R 243090 CDS NP_864315.1 32471322 1795141 complement(642250..642486) 1 NC_005027.1 hypothetical protein 642486 1795141 RB1258 Rhodopirellula baltica SH 1 hypothetical protein NP_864315.1 642250 R 243090 CDS NP_864316.1 32471323 1791230 642452..642631 1 NC_005027.1 hypothetical protein 642631 1791230 RB1259 Rhodopirellula baltica SH 1 hypothetical protein NP_864316.1 642452 D 243090 CDS NP_864317.1 32471324 1794697 642702..643742 1 NC_005027.1 signal peptide 643742 1794697 RB1260 Rhodopirellula baltica SH 1 signal peptide NP_864317.1 642702 D 243090 CDS NP_864318.1 32471325 1791510 complement(643894..647331) 1 NC_005027.1 PMID: 3316192 best DB hits: BLAST: pir:F83561; probable DNA polymerase alpha chain PA0669 [imported] -; E=0.0 pir:A70972; probable DNA polymerase III alpha chain - Mycobacterium; E=1e-176 swissprot:O34623; DP3A_BACSU DNA POLYMERASE III, ALPHA CHAIN -----; E=1e-108 COG: PA0669; COG0587 DNA polymerase III alpha subunit; E=0.0 PFAM: PF02231; PHP domain N-terminal region; E=3.3e-19 PF01336; OB-fold nucleic acid binding domain; E=6.8e-05; DNA polymerase III alpha subunit 647331 dnaE 1791510 dnaE Rhodopirellula baltica SH 1 DNA polymerase III alpha subunit NP_864318.1 643894 R 243090 CDS NP_864319.1 32471326 1793671 647136..648260 1 NC_005027.1 PMID: 8355615 best DB hits: BLAST: pir:C72038; conserved hypothetical protein CP1104 [imported] -; E=1e-31 swissprot:P45672; NIR3_AZOBR NIFR3-LIKE PROTEIN ----- pir:; E=2e-31 pir:A81750; NifR3Smm1 family protein TC0013 [imported] - Chlamydia; E=1e-30 COG: CPn0768; COG0042 Predicted TIM-barrel enzymes, possibly; E=1e-32 yhdG; COG0042 Predicted TIM-barrel enzymes, possibly dehydrogenases,; E=1e-23 Cj0123c; COG0042 Predicted TIM-barrel enzymes, possibly; E=8e-23 PFAM: PF01207; Uncharacterized protein famil; E=5.7e-62; NifR3 family protein 648260 1793671 RB1263 Rhodopirellula baltica SH 1 NifR3 family protein NP_864319.1 647136 D 243090 CDS NP_864320.1 32471327 1793121 complement(648505..648804) 1 NC_005027.1 hypothetical protein 648804 1793121 RB1266 Rhodopirellula baltica SH 1 hypothetical protein NP_864320.1 648505 R 243090 CDS NP_864321.1 32471328 1795869 complement(648801..649412) 1 NC_005027.1 hypothetical protein 649412 1795869 RB1269 Rhodopirellula baltica SH 1 hypothetical protein NP_864321.1 648801 R 243090 CDS NP_864322.1 32471329 1793796 649173..649637 1 NC_005027.1 PMID: 9634230 best DB hits: BLAST: pir:G70790; probable transcriptional regulator Rv3678c - Mycobacterium; E=5e-20 pir:T36560; hypothetical protein SCH17.09c - Streptomyces coelicolor; E=6e-18 embl:CAB62819.1; (AL133436) hypothetical protein L7276.02; E=4e-17 COG: Rv3678c; COG0251 translation initiation inhibitor; E=5e-21 PFAM: PF01042; YjgF family; E=0.22; translation initiation inhibitor 649637 1793796 RB1270 Rhodopirellula baltica SH 1 translation initiation inhibitor NP_864322.1 649173 D 243090 CDS NP_864323.1 32471330 1793636 649696..650688 1 NC_005027.1 hypothetical protein 650688 1793636 RB1272 Rhodopirellula baltica SH 1 hypothetical protein NP_864323.1 649696 D 243090 CDS NP_864324.1 32471331 1791321 650886..652316 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: pir:D72379; hypothetical protein TM0428 - Thermotoga maritima; E=5e-56 pir:H75303; probable NADH-dependent flavin oxidoreductase -; E=3e-11 ddbj:BAB05200.1; (AP001512) NADH oxidase [Bacillus halodurans]; E=4e-09 COG: TM0428; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme; E=4e-57 nemA; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family; E=3e-08 PA2932; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme; E=6e-08 PFAM: PF00724; NADH:flavin oxidoreductase / NAD; E=2.5e-08; NADH:flavin oxidoreductase 652316 1791321 RB1274 Rhodopirellula baltica SH 1 NADH:flavin oxidoreductase NP_864324.1 650886 D 243090 CDS NP_864325.1 32471332 1791121 complement(652320..652544) 1 NC_005027.1 hypothetical protein 652544 1791121 RB1275 Rhodopirellula baltica SH 1 hypothetical protein NP_864325.1 652320 R 243090 CDS NP_864326.1 32471333 1790070 complement(652505..652696) 1 NC_005027.1 hypothetical protein 652696 1790070 RB1276 Rhodopirellula baltica SH 1 hypothetical protein NP_864326.1 652505 R 243090 CDS NP_864327.1 32471334 1794453 652712..653143 1 NC_005027.1 signal peptide 653143 1794453 RB1277 Rhodopirellula baltica SH 1 signal peptide NP_864327.1 652712 D 243090 CDS NP_864328.1 32471335 1793315 653260..653697 1 NC_005027.1 best DB hits: BLAST: gb:AAF35906.1; AF232672_1 (AF232672) FK506-binding protein; E=7e-06 pir:A83180; probable peptidyl-prolyl cis-trans isomerase,; E=3e-04 prf:2204313A; FK506-binding protein 65kD [Mus musculus]; E=9e-04 COG: PA3717; COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1; E=3e-05 PFAM: PF00254; FKBP-type peptidyl-prolyl cis-trans; E=6.8e-10; peptidyl-prolyl cis-trans isomerase, FkbP-type 653697 1793315 RB1279 Rhodopirellula baltica SH 1 peptidyl-prolyl cis-trans isomerase, FkbP-type NP_864328.1 653260 D 243090 CDS NP_864329.1 32471336 1792970 653595..654287 1 NC_005027.1 PMID: 10747959; hypothetical protein 654287 1792970 RB1281 Rhodopirellula baltica SH 1 hypothetical protein NP_864329.1 653595 D 243090 CDS NP_864330.1 32471337 1792541 654412..654585 1 NC_005027.1 PMID: 8108379 PMID: 9665876 best DB hits: BLAST: pir:H71274; probable ankyrin - syphilis spirochete ----- gb:; E=0.37 gb:AAF49554.1; (AE003529) CG6017 gene product [Drosophila; E=0.43 gb:AAC26848.1; (AF049612) huntingtin interacting protein HYPH; E=0.45 PFAM: PF00023; Ank repeat; E=0.052; ankyrin protein 654585 1792541 RB1284 Rhodopirellula baltica SH 1 ankyrin protein NP_864330.1 654412 D 243090 CDS NP_864331.1 32471338 1794598 complement(654569..655774) 1 NC_005027.1 PMID: 10708371 best DB hits: BLAST: gb:AAG55028.1; AE005248_9 (AE005248) receptor; E=4e-62 swissprot:P28917; YDCC_ECOLI H REPEAT-ASSOCIATED PROTEIN IN; E=5e-62 gb:AAG54539.1; AE005200_1 (AE005200) Z0271 gene product; E=9e-62 PFAM: PF01811; Transposase; E=5.2e-67; transposase 655774 1794598 RB1286 Rhodopirellula baltica SH 1 transposase NP_864331.1 654569 R 243090 CDS NP_864332.1 32471339 1796306 655835..656134 1 NC_005027.1 PMID: 10731132 PMID: 8108379 best DB hits: BLAST: gb:AAF49247.1; (AE003519) CG6896 gene product [Drosophila; E=9e-06 gb:AAF49547.1; (AE003528) CG5891 gene product [Drosophila; E=2e-04 gb:AAB86895.1; (AF034547) protein phosphatase M130 myosin; E=0.006 PFAM: PF00023; Ank repeat; E=5.1e-06; hypothetical protein 656134 1796306 RB1288 Rhodopirellula baltica SH 1 hypothetical protein NP_864332.1 655835 D 243090 CDS NP_864333.1 32471340 1795861 656235..656687 1 NC_005027.1 hypothetical protein 656687 1795861 RB1289 Rhodopirellula baltica SH 1 hypothetical protein NP_864333.1 656235 D 243090 CDS NP_864334.1 32471341 1795622 656684..656977 1 NC_005027.1 hypothetical protein 656977 1795622 RB1291 Rhodopirellula baltica SH 1 hypothetical protein NP_864334.1 656684 D 243090 CDS NP_864335.1 32471342 1794780 complement(657051..657236) 1 NC_005027.1 hypothetical protein 657236 1794780 RB1294 Rhodopirellula baltica SH 1 hypothetical protein NP_864335.1 657051 R 243090 CDS NP_864336.1 32471343 1795162 657348..657866 1 NC_005027.1 signal peptide 657866 1795162 RB1297 Rhodopirellula baltica SH 1 signal peptide NP_864336.1 657348 D 243090 CDS NP_864337.1 32471344 1790852 657875..658102 1 NC_005027.1 hypothetical protein 658102 1790852 RB1299 Rhodopirellula baltica SH 1 hypothetical protein NP_864337.1 657875 D 243090 CDS NP_864338.1 32471345 1790029 658168..658959 1 NC_005027.1 hypothetical protein 658959 1790029 RB1300 Rhodopirellula baltica SH 1 hypothetical protein NP_864338.1 658168 D 243090 CDS NP_864339.1 32471346 1793345 complement(658948..659157) 1 NC_005027.1 hypothetical protein 659157 1793345 RB1301 Rhodopirellula baltica SH 1 hypothetical protein NP_864339.1 658948 R 243090 CDS NP_864340.1 32471347 1792346 659166..659762 1 NC_005027.1 hypothetical protein 659762 1792346 RB1302 Rhodopirellula baltica SH 1 hypothetical protein NP_864340.1 659166 D 243090 CDS NP_864341.1 32471348 1791118 659778..660044 1 NC_005027.1 hypothetical protein 660044 1791118 RB1304 Rhodopirellula baltica SH 1 hypothetical protein NP_864341.1 659778 D 243090 CDS NP_864342.1 32471349 1794241 660019..660810 1 NC_005027.1 hypothetical protein 660810 1794241 RB1305 Rhodopirellula baltica SH 1 hypothetical protein NP_864342.1 660019 D 243090 CDS NP_864343.1 32471350 1794055 660807..662321 1 NC_005027.1 PMID: 2263648 best DB hits: BLAST: gb:AAF63149.1; AC011001_19 (AC011001) Similar to phytoene; E=1e-09 swissprot:P22871; CRTI_ERWHE PHYTOENE DEHYDROGENASE (PHYTOENE; E=4e-05 gb:AAA64981.1; (M87280) phytoene dehydrogenase [Erwinia; E=4e-05 COG: BH1848; COG1233 Phytoene dehydrogenase and related proteins; E=6e-06 PFAM: PF01134; Glucose inhibited division prot; E=0.017 PF01593; Flavin containing amine oxidase; E=0.08 PF00732; GMC oxidoreductases; E=0.049; phytoene dehydrogenase 662321 1794055 RB1308 Rhodopirellula baltica SH 1 phytoene dehydrogenase NP_864343.1 660807 D 243090 CDS NP_864344.1 32471351 1791403 662318..663079 1 NC_005027.1 PMID: 2229036 best DB hits: BLAST: pir:B72334; ABC transporter ATP-binding protein - Thermotoga; E=8e-34 gb:AAG19180.1; (AE005015) ABC transporter ATP-binding protein; E=4e-33 embl:CAC11214.1; (AL445063) gliding motility protein (gldA); E=5e-33 COG: TM0793; COG1131 ABC-type multidrug transport system, ATPase; E=8e-35 ybhF; COG1131 ABC-type multidrug transport system, ATPase component; E=1e-26 PFAM: PF00448; SRP54-type protein, GTPase do; E=0.0013 PF00005; ABC transporter; E=6.1e-52; ABC-type multidrug transport system, ATPase component 663079 1791403 RB1310 Rhodopirellula baltica SH 1 ABC-type multidrug transport system, ATPase component NP_864344.1 662318 D 243090 CDS NP_864345.1 32471352 1796537 663076..664746 1 NC_005027.1 hypothetical protein 664746 1796537 RB1311 Rhodopirellula baltica SH 1 hypothetical protein NP_864345.1 663076 D 243090 CDS NP_864346.1 32471353 1793477 664924..665478 1 NC_005027.1 best DB hits: PFAM: PF00672; HAMP domain; E=0.45; signal peptide 665478 1793477 RB1316 Rhodopirellula baltica SH 1 signal peptide NP_864346.1 664924 D 243090 CDS NP_864347.1 32471354 1796538 665572..667164 1 NC_005027.1 catalyzes the formation of 2-isopropylmalate from 1-methyl-2-oxobutanoate and acetyl-CoA; alpha-isopropylmalate synthase 667164 leuA 1796538 leuA Rhodopirellula baltica SH 1 alpha-isopropylmalate synthase NP_864347.1 665572 D 243090 CDS NP_864348.1 32471355 1790563 667248..670370 1 NC_005027.1 PMID: 3275660 best DB hits: BLAST: swissprot:Q55522; SYV_SYNY3 VALYL-TRNA SYNTHETASE (VALINE--TRNA; E=0.0 swissprot:Q05873; SYV_BACSU VALYL-TRNA SYNTHETASE (VALINE--TRNA; E=0.0 pir:SYBSVS; valine--tRNA ligase (EC 6.1.1.9) - Bacillus; E=0.0 COG: slr0557; COG0525 Valyl-tRNA synthetase; E=0.0 PFAM: PF00133; tRNA synthetases class I (I, L, M; E=5.3e-75; valyl-tRNA synthetase 670370 valS 1790563 valS Rhodopirellula baltica SH 1 valyl-tRNA synthetase NP_864348.1 667248 D 243090 CDS NP_864349.1 32471356 1793925 670478..671455 1 NC_005027.1 PMID: 7952186 best DB hits: BLAST: pir:T35673; probable transcription repressor - Streptomyces; E=2e-13 ddbj:BAB04813.1; (AP001510) transcriptional repressor of the; E=1e-12 ddbj:BAB04516.1; (AP001509) glucose kinase [Bacillus halodurans]; E=5e-11 COG: BH1094; COG1940 Transcriptional regulators; E=1e-13 PFAM: PF00370; FGGY family of carbohydrate kinases,; E=0.8 PF00480; ROK family; E=3.6e-25; transcription repressor 671455 1793925 RB1321 Rhodopirellula baltica SH 1 transcription repressor NP_864349.1 670478 D 243090 CDS NP_864350.1 32471357 1790333 671526..671633 1 NC_005027.1 hypothetical protein 671633 1790333 RB1322 Rhodopirellula baltica SH 1 hypothetical protein NP_864350.1 671526 D 243090 CDS NP_864351.1 32471358 1796527 complement(671656..672945) 1 NC_005027.1 PMID: 9529885 best DB hits: BLAST: pir:A83308; probable MFS transporter PA2701 [imported] - Pseudomonas; E=1e-60 pir:T50939; DitE protein [imported] - Pseudomonas abietaniphila; E=4e-46 pir:H83212; conserved hypothetical protein PA3465 [imported] -; E=1e-42 COG: PA2701; COG0477 Permeases of the major facilitator superfamily; E=1e-61; MFS family transporter 672945 1796527 RB1323 Rhodopirellula baltica SH 1 MFS family transporter NP_864351.1 671656 R 243090 CDS NP_864352.1 32471359 1792504 complement(672936..673169) 1 NC_005027.1 hypothetical protein 673169 1792504 RB1324 Rhodopirellula baltica SH 1 hypothetical protein NP_864352.1 672936 R 243090 CDS NP_864353.1 32471360 1792681 673181..674032 1 NC_005027.1 PMID: 2229036 best DB hits: BLAST: pir:S76626; ABC-type transport protein sll0489 - Synechocystis sp.; E=2e-36 gb:AAK06094.1; AE006429_12 (AE006429) ABC transporter ATP binding; E=8e-33 gb:AAG19180.1; (AE005015) ABC transporter ATP-binding protein; E=1e-32 COG: sll0489; COG1131 ABC-type multidrug transport system, ATPase; E=2e-37 PFAM: PF00448; SRP54-type protein, GTPase domai; E=0.041 PF00693; Thymidine kinase from herpesviru; E=0.88 PF01078; Magnesium chelatase, subunit Chl; E=0.8; multidrug ABC transporter ATPase 674032 1792681 RB1325 Rhodopirellula baltica SH 1 multidrug ABC transporter ATPase NP_864353.1 673181 D 243090 CDS NP_864354.1 32471361 1792602 674029..675825 1 NC_005027.1 hypothetical protein 675825 1792602 RB1326 Rhodopirellula baltica SH 1 hypothetical protein NP_864354.1 674029 D 243090 CDS NP_864355.1 32471362 1795683 complement(675932..677347) 1 NC_005027.1 PMID: 8759852 best DB hits: BLAST: gb:AAC77833.1; (U38473) outer membrane lipoprotein; E=2e-07 gb:AAG24804.1; (AF285085) outer membrane lipoprotein; E=4e-07 swissprot:P76388; WZA_ECOLI POLYSACCHARIDE EXPORT PROTEIN; E=5e-07 COG: wza; COG1596 Periplasmic protein involved in polysaccharide export; E=5e-08 aq_505; COG1596 Periplasmic protein involved in polysaccharide; E=5e-06; polysaccharide export protein 677347 1795683 RB1329 Rhodopirellula baltica SH 1 polysaccharide export protein NP_864355.1 675932 R 243090 CDS NP_864356.1 32471363 1796752 complement(677271..679124) 1 NC_005027.1 best DB hits: BLAST: embl:CAB96707.1; (AL360354) vir18, transmembrane; E=0.059; transmembrane protein 679124 1796752 RB1331 Rhodopirellula baltica SH 1 transmembrane protein NP_864356.1 677271 R 243090 CDS NP_864357.1 32471364 1796199 679042..679332 1 NC_005027.1 hypothetical protein 679332 1796199 RB1334 Rhodopirellula baltica SH 1 hypothetical protein NP_864357.1 679042 D 243090 CDS NP_864358.1 32471365 1791138 679357..680019 1 NC_005027.1 hypothetical protein 680019 1791138 RB1336 Rhodopirellula baltica SH 1 hypothetical protein NP_864358.1 679357 D 243090 CDS NP_864359.1 32471366 1794906 complement(680026..681441) 1 NC_005027.1 best DB hits: PFAM: PF00036; EF hand; E=0.16; signal peptide 681441 1794906 RB1337 Rhodopirellula baltica SH 1 signal peptide NP_864359.1 680026 R 243090 CDS NP_864360.1 32471367 1792680 complement(681384..681689) 1 NC_005027.1 hypothetical protein 681689 1792680 RB1339 Rhodopirellula baltica SH 1 hypothetical protein NP_864360.1 681384 R 243090 CDS NP_864361.1 32471368 1796475 complement(681705..681827) 1 NC_005027.1 hypothetical protein 681827 1796475 RB1341 Rhodopirellula baltica SH 1 hypothetical protein NP_864361.1 681705 R 243090 CDS NP_864362.1 32471369 1796560 681879..682889 1 NC_005027.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 682889 fliP 1796560 fliP Rhodopirellula baltica SH 1 flagellar biosynthesis protein FliP NP_864362.1 681879 D 243090 CDS NP_864363.1 32471370 1794988 682896..683162 1 NC_005027.1 PMID: 1597417 best DB hits: BLAST: swissprot:P74891; SSAS_SALTY SECRETION SYSTEM APPARATUS PROTEIN; E=3e-04 pir:H81264; flagellar biosynthetic protein Cj1675 [imported] -; E=6e-04 swissprot:P35535; FLIQ_BACSU FLAGELLAR BIOSYNTHETIC PROTEIN FLIQ; E=7e-04 COG: Cj1675; COG1987 Flagellar biosynthesis/type III secretory pathway; E=6e-05 PFAM: PF01313; Bacterial export proteins, famil; E=4.1e-26; flagellar biosynthetic protein fliQ 683162 fliQ 1794988 fliQ Rhodopirellula baltica SH 1 flagellar biosynthetic protein fliQ NP_864363.1 682896 D 243090 CDS NP_864364.1 32471371 1794139 683165..683959 1 NC_005027.1 PMID: 9683497 best DB hits: BLAST: gb:AAC32324.1; (AF044580) flagellar protein FliR [Rhodobacter; E=1e-14 pir:B83465; flagellar biosynthetic protein FliR PA1448 [imported] -; E=2e-13 pir:E81323; flagellar biosynthetic protein Cj1179c [imported] -; E=4e-12 COG: PA1448; COG1684 Flagellar biosynthesis/type III secretory pathway; E=2e-14 PFAM: PF01311; Bacterial export proteins, fami; E=7.9e-32; flagellar biosynthetic protein fliR 683959 fliR 1794139 fliR Rhodopirellula baltica SH 1 flagellar biosynthetic protein fliR NP_864364.1 683165 D 243090 CDS NP_864365.1 32471372 1796517 683952..685034 1 NC_005027.1 PMID: 8299954 best DB hits: BLAST: pir:I40395; flagellar biosynthetic protein FlhB - Bacillus subtilis; E=7e-51 swissprot:P35538; FLHB_BACSU FLAGELLAR BIOSYNTHETIC PROTEIN FLHB; E=7e-51 pir:D72319; flagellar biosynthetic protein flhB TM0909 - Thermotoga; E=6e-46 COG: BS_flhB; COG1377 Flagellar biosynthesis/type III secretory pathway; E=6e-52 TM1672; COG2257 Uncharacterized BCR homologous to the cytoplasmic; E=9e-10 PFAM: PF01312; FlhB HrpN YscU SpaS Family; E=1.4e-91; flagellar biosynthetic protein FlhB 685034 flhB 1796517 flhB Rhodopirellula baltica SH 1 flagellar biosynthetic protein FlhB NP_864365.1 683952 D 243090 CDS NP_864366.1 32471373 1790562 685040..685741 1 NC_005027.1 PMID: 10910347 best DB hits: BLAST: pir:A82607; hypothetical protein XF2023 [imported] - Xylella; E=4e-26; hypothetical protein 685741 1790562 RB1348 Rhodopirellula baltica SH 1 hypothetical protein NP_864366.1 685040 D 243090 CDS NP_864367.1 32471374 1792060 685879..686358 1 NC_005027.1 hypothetical protein 686358 1792060 RB1350 Rhodopirellula baltica SH 1 hypothetical protein NP_864367.1 685879 D 243090 CDS NP_864368.1 32471375 1792246 686463..687803 1 NC_005027.1 hypothetical protein 687803 1792246 RB1352 Rhodopirellula baltica SH 1 hypothetical protein NP_864368.1 686463 D 243090 CDS NP_864369.1 32471376 1790149 complement(687873..689234) 1 NC_005027.1 PMID: 9428682 best DB hits: BLAST: pir:T44945; hypothetical protein 6 [imported] - Natronobacterium; E=7e-14 swissprot:Q9RTP8; MNTH_DEIRA PROBABLE MANGANESE TRANSPORT PROTEIN; E=7e-08 swissprot:Q9RPF4; MNTH_SALTY MANGANESE TRANSPORT PROTEIN MNTH; E=9e-05 COG: DR1709; COG1914 Mn2+ and Fe2+ transporters of the NRAMP family; E=7e-09 PFAM: PF00122; E1-E2 ATPase; E=0.38 PF01566; Natural resistance-associated ma; E=0.00088; cytochrome ba3- manganese transport protein mntH 689234 1790149 RB1353 Rhodopirellula baltica SH 1 cytochrome ba3- manganese transport protein mntH NP_864369.1 687873 R 243090 CDS NP_864370.2 161579036 1792493 689283..690014 1 NC_005027.1 catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate; glucosamine-6-phosphate deaminase 690014 nagB 1792493 nagB Rhodopirellula baltica SH 1 glucosamine-6-phosphate deaminase NP_864370.2 689283 D 243090 CDS NP_864371.1 32471378 1794488 690011..690922 1 NC_005027.1 PMID: 9634230 best DB hits: BLAST: pir:C70845; probable nagA protein - Mycobacterium tuberculosis; E=8e-23 embl:CAB93044.1; (AL357432) deacetylase [Streptomyces; E=2e-19 swissprot:O34450; NAGA_BACSU N-ACETYLGLUCOSAMINE-6-PHOSPHATE; E=5e-18 COG: Rv3332; COG1820 N-acetylglucosamine-6-phosphate deacetylase; E=7e-24 PFAM: PF02612; N-acetylglucosamine-6-phosphate deac; E=5.6e-05; N-acetylglucosamine-6-phosphate deacetylase 690922 nagA 1794488 nagA Rhodopirellula baltica SH 1 N-acetylglucosamine-6-phosphate deacetylase NP_864371.1 690011 D 243090 CDS NP_864372.1 32471379 1791908 complement(690962..691930) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:H70302; conserved hypothetical protein aq_035 - Aquifex aeolicus; E=2e-26 pir:A71678; probable response regulatory protein RP237 - Rickettsia; E=5e-21 pir:G82209; GGDEF family protein VC1353 [imported] - Vibrio cholerae; E=8e-21 COG: aq_035_2; COG2199 Diguanylate cyclase/phosphodiesterase domain 1; E=2e-27 PFAM: PF00990; GGDEF domain; E=2.6e-46; hypothetical protein 691930 1791908 RB1357 Rhodopirellula baltica SH 1 hypothetical protein NP_864372.1 690962 R 243090 CDS NP_864373.1 32471380 1794481 complement(691982..693322) 1 NC_005027.1 PMID: 11208782 best DB hits: BLAST: gb:AAB93540.1; (AF016923) ADP-glucose pyrophosphorylase [Thermus; E=1e-103 pir:C82428; glucose-1-phosphate adenylyltransferase VCA0699; E=1e-102 embl:CAC17471.1; (AJ291603) ADP glucose pyrophosphorylase; E=9e-99 COG: VCA0699; COG0448 ADP-glucose pyrophosphorylase; E=1e-103 MTH1759; COG1208 Nucleoside-diphosphate-sugar pyrophosphorylases; E=9e-20 BH1086; COG0448 ADP-glucose pyrophosphorylase; E=3e-14 PFAM: PF00483; Nucleotidyl transferase; E=5.7e-74; ADP-glucose pyrophosphorylase 693322 glgC 1794481 glgC Rhodopirellula baltica SH 1 ADP-glucose pyrophosphorylase NP_864373.1 691982 R 243090 CDS NP_864374.1 32471381 1793637 693488..695377 1 NC_005027.1 PMID: 10684935 best DB hits: BLAST: swissprot:P18584; DEGP_CHLTR PROBABLE SERINE PROTEASE DO-LIKE; E=1e-63 pir:B81728; serine proteinase, HtrADegQ/DegS family TC0210; E=3e-63 embl:CAA72164.1; (Y11304) ORF E0 [Rhodobacter capsulatus]; E=5e-62 COG: CT823; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=1e-64 CPn0979; COG0265 Trypsin-like serine proteases, typically; E=5e-63 htrA; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=3e-57 PFAM: PF02874; ATP synthase alpha/beta family,; E=0.027 PF00089; Trypsin; E=9.8e-30 PF00595; PDZ domain (Also known as DHR o; E=1e-10; serine protease do-like DEGP 695377 1793637 RB1359 Rhodopirellula baltica SH 1 serine protease do-like DEGP NP_864374.1 693488 D 243090 CDS NP_864375.1 32471382 1791466 695412..696413 1 NC_005027.1 hypothetical protein 696413 1791466 RB1361 Rhodopirellula baltica SH 1 hypothetical protein NP_864375.1 695412 D 243090 CDS NP_864376.1 32471383 1790285 696352..696600 1 NC_005027.1 hypothetical protein 696600 1790285 RB1362 Rhodopirellula baltica SH 1 hypothetical protein NP_864376.1 696352 D 243090 CDS NP_864377.1 32471384 1791802 complement(696588..697673) 1 NC_005027.1 PMID: 10473410 best DB hits: BLAST: gb:AAC23578.1; (AF070715) alanine dehydrogenase [Shewanella sp.; E=2e-97 pir:JE0388; alanine dehydrogenase (EC 1.4.1.1) - Enterobacter; E=1e-96 swissprot:P30234; DHA_MYCTU ALANINE DEHYDROGENASE (40 KDA ANTIGEN); E=5e-96 COG: Rv2780; COG0686 Alanine dehydrogenase; E=5e-97 pntA; COG3288 NAD/NADP transhydrogenase alpha subunit; E=4e-21 PFAM: PF01262; Alanine dehydrogenase/pyridine nucl; E=1.6e-147; alanine dehydrogenase 697673 ald 1791802 ald Rhodopirellula baltica SH 1 alanine dehydrogenase NP_864377.1 696588 R 243090 CDS NP_864378.1 32471385 1794226 complement(697677..699089) 1 NC_005027.1 best DB hits: PFAM: PF00884; Sulfatase; E=0.0012; sulfatase 699089 1794226 RB1364 Rhodopirellula baltica SH 1 sulfatase NP_864378.1 697677 R 243090 CDS NP_864379.1 32471386 1793732 699089..700030 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S74482; UDP-N-acetyl-D-mannosaminuronic acid transferase rffM-1; E=3e-32 embl:CAB92959.1; (AJ401026) hypothetical protein; E=2e-28 prf:2211258F; cpsF gene [Streptococcus pneumoniae]; E=1e-24 COG: slr1118; COG1922 Teichoic acid biosynthesis proteins; E=3e-33; UDP-N-acetyl-D-mannosaminuronic acid transferase 700030 1793732 RB1367 Rhodopirellula baltica SH 1 UDP-N-acetyl-D-mannosaminuronic acid transferase NP_864379.1 699089 D 243090 CDS NP_864380.1 32471387 1792409 complement(700085..701491) 1 NC_005027.1 PMID: 9384377 best DB hits: BLAST: pir:E69990; proteinase IV homolog yteI - Bacillus subtilis -----; E=1e-21 pir:F69207; proteinase IV - Methanobacterium thermoautotrophicum; E=1e-18 ddbj:BAB06917.1; (AP001518) proteinase IV [Bacillus halodurans]; E=3e-17 COG: BS_yteI; COG0616 Periplasmic serine proteases (ClpP class); E=1e-22 PFAM: PF01343; Peptidase U7; E=3e-18; proteinase IV homolog yteI 701491 sppA 1792409 sppA Rhodopirellula baltica SH 1 proteinase IV homolog yteI NP_864380.1 700085 R 243090 CDS NP_864381.1 32471388 1791492 701430..703052 1 NC_005027.1 hypothetical protein 703052 1791492 RB1372 Rhodopirellula baltica SH 1 hypothetical protein NP_864381.1 701430 D 243090 CDS NP_864382.1 32471389 1792208 complement(702919..705720) 1 NC_005027.1 best DB hits: BLAST: gb:AAF82144.1; AC034256_8 (AC034256) Contains similarity to F-box; E=0.004 ddbj:BAB21785.1; (AB051481) KIAA1694 protein [Homo sapiens]; E=0.061 embl:CAB95328.1; (AL359782) possible adenylate cyclase; E=0.096; adenylate cyclase 705720 1792208 RB1376 Rhodopirellula baltica SH 1 adenylate cyclase NP_864382.1 702919 R 243090 CDS NP_864383.1 32471390 1796661 705784..706896 1 NC_005027.1 PMID: 11759840 PMID: 11016950 best DB hits: BLAST: gb:AAG19745.1; (AE005060) deoxyhypusine synthase; Dhs; E=4e-07 gb:AAB88953.1; (AE000945) deoxyhypusine synthase (dys1-2); E=1e-05 embl:CAB65461.1; (AJ238622) deoxyhypusine synthase [Senecio; E=3e-05 COG: VNG1432G; COG1899 Deoxyhypusine synthase; E=4e-08 PFAM: PF01916; Deoxyhypusine synthase; E=0.57; deoxyhypusine synthase (Dhs) 706896 dys1 1796661 dys1 Rhodopirellula baltica SH 1 deoxyhypusine synthase (Dhs) NP_864383.1 705784 D 243090 CDS NP_864384.1 32471391 1791471 complement(706928..707461) 1 NC_005027.1 hypothetical protein 707461 1791471 RB1384 Rhodopirellula baltica SH 1 hypothetical protein NP_864384.1 706928 R 243090 CDS NP_864385.1 32471392 1796347 complement(707484..708536) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:G83627; probable nucleoside hydrolase PA0143 [imported] -; E=0.062 COG: PA0143; COG1957 Inosine-uridine nucleoside N-ribohydrolase; E=0.006 PFAM: PF01156; Inosine-uridine preferring nucle; E=0.52; nucleoside hydrolase 708536 1796347 RB1386 Rhodopirellula baltica SH 1 nucleoside hydrolase NP_864385.1 707484 R 243090 CDS NP_864386.1 32471393 1791276 complement(708434..708892) 1 NC_005027.1 hypothetical protein 708892 1791276 RB1389 Rhodopirellula baltica SH 1 hypothetical protein NP_864386.1 708434 R 243090 CDS NP_864387.1 32471394 1795558 complement(708718..709167) 1 NC_005027.1 signal peptide 709167 1795558 RB1390 Rhodopirellula baltica SH 1 signal peptide NP_864387.1 708718 R 243090 CDS NP_864388.1 32471395 1791285 complement(709164..710780) 1 NC_005027.1 PMID: 11206551 best DB hits: BLAST: swissprot:Q10403; YM16_MYCTU HYPOTHETICAL 31.7 KDA PROTEIN RV2216; E=9e-44 swissprot:P77775; YFCH_ECOLI HYPOTHETICAL 32.7 KDA PROTEIN IN; E=2e-42 gb:AAG57433.1; AE005462_8 (AE005462) sugar nucleotide; E=4e-42 COG: Rv2216; COG1090 Predicted nucleoside-diphosphate sugar epimerases; E=8e-45; nucleoside-diphosphate sugar epimerase 710780 1791285 RB1391 Rhodopirellula baltica SH 1 nucleoside-diphosphate sugar epimerase NP_864388.1 709164 R 243090 CDS NP_864389.1 32471396 1792101 complement(710683..711705) 1 NC_005027.1 PMID: 10548737 best DB hits: BLAST: ddbj:BAA84590.1; (AB003084) RNA polymerase sigma 70 [Helicobacter; E=1e-14 swissprot:Q9ZMY3; RPSD_HELPJ RNA POLYMERASE SIGMA FACTOR RPOD; E=2e-14 gb:AAB81010.1; (U83703) RNA polymerase principal sigma factor; E=2e-14 COG: jhp0081; COG0568 DNA-directed RNA polymerase sigma subunits; E=1e-15 PFAM: PF00140; Sigma-70 factor; E=8.8e-19; RNA polymerase sigma 70 711705 rpoD 1792101 rpoD Rhodopirellula baltica SH 1 RNA polymerase sigma 70 NP_864389.1 710683 R 243090 CDS NP_864390.1 32471397 1792957 complement(711758..711994) 1 NC_005027.1 hypothetical protein 711994 1792957 RB1394 Rhodopirellula baltica SH 1 hypothetical protein NP_864390.1 711758 R 243090 CDS NP_864391.1 32471398 1790687 712097..713056 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB56371.1; (AL118514) DNA-binding protein; E=0.089 embl:CAC22757.1; (AL512944) hypothetical protein SC8D11.40; E=0.48 gb:AAD14631.1; (AF102623) trimethylamine corrinoid protein MttC; E=0.64 PFAM: PF02310; B12 binding domain; E=0.11; DNA-binding protein 713056 1790687 RB1395 Rhodopirellula baltica SH 1 DNA-binding protein NP_864391.1 712097 D 243090 CDS NP_864392.1 32471399 1792282 complement(713151..714437) 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: pir:H72222; conserved hypothetical protein - Thermotoga maritima; E=2e-04 COG: TM1686; COG1376 Uncharacterized ACR; E=2e-05 PFAM: PF01476; LysM domain; E=3.9e-07; hypothetical protein 714437 1792282 RB1398 Rhodopirellula baltica SH 1 hypothetical protein NP_864392.1 713151 R 243090 CDS NP_864393.1 32471400 1790814 714542..715402 1 NC_005027.1 hypothetical protein 715402 1790814 RB1400 Rhodopirellula baltica SH 1 hypothetical protein NP_864393.1 714542 D 243090 CDS NP_864394.1 32471401 1793065 complement(715604..715867) 1 NC_005027.1 hypothetical protein 715867 1793065 RB1403 Rhodopirellula baltica SH 1 hypothetical protein NP_864394.1 715604 R 243090 CDS NP_864395.1 32471402 1795035 715830..717395 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: pir:B72292; hypothetical protein TM1117 - Thermotoga maritima; E=4e-24 pir:C83561; probable type II secretion system protein PA0685; E=8e-22 pir:S32858; outD protein - Erwinia carotovora ----- embl:; E=1e-18 COG: TM1117; COG1450 General secretory pathway protein D; E=4e-25 PFAM: PF00263; Bacterial type II and III secr; E=1.7e-25; protein transporter 717395 outD 1795035 outD Rhodopirellula baltica SH 1 protein transporter NP_864395.1 715830 D 243090 CDS NP_864396.1 32471403 1791912 717470..719293 1 NC_005027.1 signal peptide 719293 1791912 RB1408 Rhodopirellula baltica SH 1 signal peptide NP_864396.1 717470 D 243090 CDS NP_864397.1 32471404 1795031 complement(719337..720365) 1 NC_005027.1 PMID: 10761919 best DB hits: BLAST: pir:H81878; probable dihydrodipicolinate synthase (EC 4.2.1.52); E=2e-08 pir:D81141; dihydrodipicolinate synthase NMB0929 [imported] -; E=3e-08 pir:D83488; probable dihydrodipicolinate synthetase PA1254; E=7e-07 COG: NMB0929; COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate; E=3e-09 PFAM: PF00701; Dihydrodipicolinate synthetase f; E=9.1e-05; dihydrodipicolinate synthase 720365 1795031 RB1411 Rhodopirellula baltica SH 1 dihydrodipicolinate synthase NP_864397.1 719337 R 243090 CDS NP_864398.1 32471405 1793028 720399..721325 1 NC_005027.1 PMID: 8626508 best DB hits: BLAST: swissprot:P56160; YHEB_CHLVI HYPOTHETICAL 28.2 KD PROTEIN IN HEMB; E=5e-37 pir:B70646; probable monophosphatase - Mycobacterium tuberculosis; E=4e-34 embl:CAB94593.1; (AL359214) monophosphatase; E=2e-33 COG: Rv3137; COG0483 Archaeal fructose-1,6-bisphosphatase and related; E=4e-35 VC2722; COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS); E=2e-13 VC0745; COG0483 Archaeal fructose-1,6-bisphosphatase and related; E=3e-12 PFAM: PF00459; Inositol monophosphatase; E=6.9e-53; inositol monophosphatase 721325 1793028 RB1412 Rhodopirellula baltica SH 1 inositol monophosphatase NP_864398.1 720399 D 243090 CDS NP_864399.1 32471406 1791977 721425..721550 1 NC_005027.1 hypothetical protein 721550 1791977 RB1413 Rhodopirellula baltica SH 1 hypothetical protein NP_864399.1 721425 D 243090 CDS NP_864400.1 32471407 1791157 complement(721538..722800) 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 722800 1791157 RB1414 Rhodopirellula baltica SH 1 signal peptide NP_864400.1 721538 R 243090 CDS NP_864401.1 32471408 1791737 722874..723194 1 NC_005027.1 hypothetical protein 723194 1791737 RB1417 Rhodopirellula baltica SH 1 hypothetical protein NP_864401.1 722874 D 243090 CDS NP_864402.1 32471409 1793799 723375..724427 1 NC_005027.1 signal peptide 724427 1793799 RB1420 Rhodopirellula baltica SH 1 signal peptide NP_864402.1 723375 D 243090 CDS NP_864403.1 32471410 1795910 complement(724470..726560) 1 NC_005027.1 best DB hits: PFAM: PF01595; Domain of unknown function DUF21; E=0.59; signal peptide 726560 1795910 RB1422 Rhodopirellula baltica SH 1 signal peptide NP_864403.1 724470 R 243090 CDS NP_864404.1 32471411 1790427 complement(726737..728476) 1 NC_005027.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit D 728476 1790427 RB1427 Rhodopirellula baltica SH 1 monovalent cation/H+ antiporter subunit D NP_864404.1 726737 R 243090 CDS NP_864405.1 32471412 1792099 complement(728473..728799) 1 NC_005027.1 hypothetical protein 728799 1792099 RB1428 Rhodopirellula baltica SH 1 hypothetical protein NP_864405.1 728473 R 243090 CDS NP_864406.1 32471413 1792030 complement(728796..730406) 1 NC_005027.1 PMID: 1470679 best DB hits: BLAST: embl:CAC14148.1; (AJ245399) NADH-ubiquinone; E=4e-80 gb:AAG19079.1; (AE005006) Vng0562c [Halobacterium sp. NRC-1]; E=4e-57 pir:F71683; NADH dehydrogenase (ubiquinone) (EC 1.6.5.3) I chain L2; E=7e-31 COG: VNG0562C; COG0651 Formate hydrogenlyase subunit 3; E=3e-58 RP283; COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L); E=7e-32 BH1316; COG0651 Formate hydrogenlyase subunit 3; E=2e-22 PFAM: PF00662; NADH-Ubiquinone oxidoreductase; E=0.69 PF00361; NADH-Ubiquinone/plastoquinone (; E=2.6e-49; NADH-ubiquinone oxidoreductase subunit 730406 1792030 RB1430 Rhodopirellula baltica SH 1 NADH-ubiquinone oxidoreductase subunit NP_864406.1 728796 R 243090 CDS NP_864407.1 32471414 1794696 complement(730340..731818) 1 NC_005027.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; monovalent cation/H+ antiporter subunit D 731818 1794696 RB1431 Rhodopirellula baltica SH 1 monovalent cation/H+ antiporter subunit D NP_864407.1 730340 R 243090 CDS NP_864408.1 32471415 1790666 complement(731815..732414) 1 NC_005027.1 PMID: 11016950 best DB hits: BLAST: gb:AAG19081.1; (AE005007) Vng0565c [Halobacterium sp. NRC-1]; E=5e-11 pir:H71683; hypothetical protein RP285 - Rickettsia prowazekii; E=9e-09 pir:E75113; long hypothetical protein PAB0488 - Pyrococcus abyssi; E=5e-07 COG: VNG0565C; COG1006 Multisubunit Na+/H+ antiporter; E=4e-12 PFAM: PF01898; Protein of unknown function DUF67; E=1.9e-11; multisubunit Na+/H+ antiporter 732414 1790666 RB1432 Rhodopirellula baltica SH 1 multisubunit Na+/H+ antiporter NP_864408.1 731815 R 243090 CDS NP_864409.1 32471416 1793120 complement(732411..732848) 1 NC_005027.1 subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit B 732848 1793120 RB1433 Rhodopirellula baltica SH 1 monovalent cation/H+ antiporter subunit B NP_864409.1 732411 R 243090 CDS NP_864410.1 32471417 1790567 complement(732845..733423) 1 NC_005027.1 subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit B 733423 1790567 RB1434 Rhodopirellula baltica SH 1 monovalent cation/H+ antiporter subunit B NP_864410.1 732845 R 243090 CDS NP_864411.1 32471418 1792433 complement(733420..733782) 1 NC_005027.1 PMID: 9679194 PMID: 11016950 best DB hits: BLAST: swissprot:O58672; Y944_PYRHO HYPOTHETICAL PROTEIN PH0944 -----; E=0.052 pir:C75465; conserved hypothetical protein - Deinococcus radiodurans; E=0.13 pir:F75101; hypothetical protein PAB0803 - Pyrococcus abyssi; E=0.67 COG: PH0944; COG1320 Multisubunit Na+/H+ antiporter; E=0.005; hypothetical protein 733782 1792433 RB1436 Rhodopirellula baltica SH 1 hypothetical protein NP_864411.1 733420 R 243090 CDS NP_864412.1 32471419 1794389 complement(733796..734224) 1 NC_005027.1 PMID: 10952301 best DB hits: BLAST: pir:F82494; conserved hypothetical protein VCA0153 [imported] -; E=5e-05 gb:AAF21817.1; AF097740_6 (AF097740) multiple resistance and pH; E=7e-04 ddbj:BAB05033.1; (AP001511) Na+H+ antiporter [Bacillus; E=0.004 COG: VCA0153; COG2212 Multisubunit Na+/H+ antiporter, MnhF subunit; E=4e-06; hypothetical protein 734224 1794389 RB1439 Rhodopirellula baltica SH 1 hypothetical protein NP_864412.1 733796 R 243090 CDS NP_864413.1 32471420 1795315 complement(734221..734754) 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: pir:C72280; conserved hypothetical protein - Thermotoga maritima; E=8e-09 pir:A71726; hypothetical protein RP156 - Rickettsia prowazekii; E=3e-08 pir:A75113; hypothetical protein PAB0485 - Pyrococcus abyssi (strain; E=8e-08 COG: TM1205; COG1863 Multisubunit Na+/H+ antiporter; E=8e-10 PFAM: PF01899; Protein of unknown function DUF68; E=1.9e-09; Na+/H+ antiporter 734754 1795315 RB1442 Rhodopirellula baltica SH 1 Na+/H+ antiporter NP_864413.1 734221 R 243090 CDS NP_864414.1 32471421 1794627 734719..734886 1 NC_005027.1 hypothetical protein 734886 1794627 RB1443 Rhodopirellula baltica SH 1 hypothetical protein NP_864414.1 734719 D 243090 CDS NP_864415.1 32471422 1794073 complement(734968..735801) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:C75341; tetratricopeptide repeat family protein - Deinococcus; E=9e-05 ddbj:BAA11643.2; (D82942) tetratricopeptide-repeat protein; E=1e-04 pir:E69078; conserved hypothetical protein MTH1585 -; E=0.006 COG: DR1891; COG0457 TPR-repeat-containing proteins; E=9e-06; TPR repeat-containing protein 735801 1794073 RB1444 Rhodopirellula baltica SH 1 TPR repeat-containing protein NP_864415.1 734968 R 243090 CDS NP_864416.1 32471423 1794997 complement(735731..736513) 1 NC_005027.1 hypothetical protein 736513 1794997 RB1446 Rhodopirellula baltica SH 1 hypothetical protein NP_864416.1 735731 R 243090 CDS NP_864417.1 32471424 1794309 736500..736697 1 NC_005027.1 hypothetical protein 736697 1794309 RB1449 Rhodopirellula baltica SH 1 hypothetical protein NP_864417.1 736500 D 243090 CDS NP_864418.1 32471425 1792990 complement(736766..738160) 1 NC_005027.1 PMID: 9371463 PMID: 11677609 best DB hits: BLAST: gb:AAG31169.1; (AF314961) unknown [Salmonella typhimurium]; E=0.043 gb:AAB89850.1; (AE001008) conserved hypothetical protein; E=0.049 pir:A82284; conserved hypothetical protein VC0762 [imported] -; E=0.13 COG: AF1399; COG1520 Uncharacterized proteins of WD40-like repeat family; E=0.005 PFAM: PF01011; PQQ enzyme repeat; E=5.4e-05; serine/threonine protein kinase related protein 738160 1792990 RB1451 Rhodopirellula baltica SH 1 serine/threonine protein kinase related protein NP_864418.1 736766 R 243090 CDS NP_864419.1 32471426 1794137 738182..738298 1 NC_005027.1 hypothetical protein 738298 1794137 RB1453 Rhodopirellula baltica SH 1 hypothetical protein NP_864419.1 738182 D 243090 CDS NP_864420.1 32471427 1793951 738371..739687 1 NC_005027.1 PMID: 7542800 best DB hits: BLAST: swissprot:P45043; XYLR_HAEIN XYLOSE OPERON REGULATORY PROTEIN; E=8e-37 swissprot:P37390; XYLR_ECOLI XYLOSE OPERON REGULATORY PROTEIN; E=1e-34 ddbj:BAB03212.1; (AB046360) xylose operon regulatory; E=6e-32 COG: HI1106_1; COG1609 Transcriptional regulators; E=3e-17 xylR_2; COG2207 AraC-type DNA-binding domain-containing proteins; E=2e-16 xylR_1; COG1609 Transcriptional regulators; E=1e-13 PFAM: PF00165; Bacterial regulatory helix-turn-heli; E=3.1e-17; xylose operon regulatory protein 739687 araC 1793951 araC Rhodopirellula baltica SH 1 xylose operon regulatory protein NP_864420.1 738371 D 243090 CDS NP_864421.1 32471428 1796747 739805..741292 1 NC_005027.1 PMID: 10699374 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=6e-33 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=3e-32 swissprot:P50428; ARSA_MOUSE ARYLSULFATASE A PRECURSOR (ASA); E=5e-29 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=7e-26 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=3e-05 Rv3077; COG3119 Arylsulfatase A and related enzymes; E=0.001 PFAM: PF00884; Sulfatase; E=3.8e-40; N-acetylgalactosamine-6-sulfatase 741292 1796747 RB1456 Rhodopirellula baltica SH 1 N-acetylgalactosamine-6-sulfatase NP_864421.1 739805 D 243090 CDS NP_864422.1 32471429 1793687 741299..741433 1 NC_005027.1 hypothetical protein 741433 1793687 RB1457 Rhodopirellula baltica SH 1 hypothetical protein NP_864422.1 741299 D 243090 CDS NP_864423.1 32471430 1796492 complement(741400..742872) 1 NC_005027.1 hypothetical protein 742872 1796492 RB1458 Rhodopirellula baltica SH 1 hypothetical protein NP_864423.1 741400 R 243090 CDS NP_864424.1 32471431 1793804 complement(742963..743517) 1 NC_005027.1 PMID: 8969502 best DB hits: BLAST: ddbj:BAA06427.1; (D30762) unknown [Bacillus subtilis]; E=0.084 swissprot:P42401; YCKC_BACSU HYPOTHETICAL 17.0 KD PROTEIN IN COMJ; E=0.084 COG: BS_yckC; COG1714 Uncharacterized membrane protein/domain; E=0.008; signal peptide 743517 1793804 RB1461 Rhodopirellula baltica SH 1 signal peptide NP_864424.1 742963 R 243090 CDS NP_864425.1 32471432 1791425 complement(743521..743799) 1 NC_005027.1 hypothetical protein 743799 1791425 RB1462 Rhodopirellula baltica SH 1 hypothetical protein NP_864425.1 743521 R 243090 CDS NP_864426.1 32471433 1790039 743584..743886 1 NC_005027.1 hypothetical protein 743886 1790039 RB1463 Rhodopirellula baltica SH 1 hypothetical protein NP_864426.1 743584 D 243090 CDS NP_864427.1 32471434 1794893 743871..745739 1 NC_005027.1 PMID: 8020961 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=9e-28 swissprot:P50473; ARS_STRPU ARYLSULFATASE PRECURSOR (ARYL-SULFATE; E=4e-26 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=6e-26 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=2e-17 PFAM: PF00884; Sulfatase; E=2.3e-39; N-acetylgalactosamine 6-sulfate sulfatase GALNS 745739 1794893 RB1464 Rhodopirellula baltica SH 1 N-acetylgalactosamine 6-sulfate sulfatase GALNS NP_864427.1 743871 D 243090 CDS NP_864428.1 32471435 1791878 745811..749368 1 NC_005027.1 best DB hits: BLAST: gb:AAF87662.1; AF223645_1 (AF223645) lipase [uncultured bacterium]; E=0.54 PFAM: PF01738; Dienelactone hydrolase; E=0.00062; signal peptide 749368 1791878 RB1467 Rhodopirellula baltica SH 1 signal peptide NP_864428.1 745811 D 243090 CDS NP_864429.1 32471436 1790715 749365..751722 1 NC_005027.1 best DB hits: PFAM: PF02018; Cellulose binding domain; E=0.61; hypothetical protein 751722 1790715 RB1470 Rhodopirellula baltica SH 1 hypothetical protein NP_864429.1 749365 D 243090 CDS NP_864430.1 32471437 1796949 751719..753245 1 NC_005027.1 signal peptide 753245 1796949 RB1472 Rhodopirellula baltica SH 1 signal peptide NP_864430.1 751719 D 243090 CDS NP_864431.1 32471438 1793817 complement(753312..753482) 1 NC_005027.1 hypothetical protein 753482 1793817 RB1474 Rhodopirellula baltica SH 1 hypothetical protein NP_864431.1 753312 R 243090 CDS NP_864432.1 32471439 1791117 753465..755204 1 NC_005027.1 PMID: 1427856 best DB hits: BLAST: swissprot:P33727; ARSB_FELCA ARYLSULFATASE B PRECURSOR (ASB); E=2e-47 pdb:1FSU; 4-Sulfatase (Human); E=3e-47 gb:AAA51779.1; (M32373) arylsulfatase B precursor [Homo sapiens]; E=4e-47 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=2e-31 PFAM: PF00884; Sulfatase; E=3.6e-76; arylsulfatase 755204 arsB 1791117 arsB Rhodopirellula baltica SH 1 arylsulfatase NP_864432.1 753465 D 243090 CDS NP_864433.1 32471440 1796137 755223..755366 1 NC_005027.1 hypothetical protein 755366 1796137 RB1476 Rhodopirellula baltica SH 1 hypothetical protein NP_864433.1 755223 D 243090 CDS NP_864434.1 32471441 1797072 755327..756943 1 NC_005027.1 PMID: 7744061 best DB hits: BLAST: swissprot:P51691; ARS_PSEAE ARYLSULFATASE (ARYL-SULFATE; E=1e-39 pir:S69336; arylsulfatase (EC 3.1.6.1) - Pseudomonas aeruginosa; E=3e-39 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=2e-35 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=9e-41 PFAM: PF00884; Sulfatase; E=1.3e-43; arylsulfatase 756943 atsA 1797072 atsA Rhodopirellula baltica SH 1 arylsulfatase NP_864434.1 755327 D 243090 CDS NP_864435.1 32471442 1792020 756943..758943 1 NC_005027.1 hypothetical protein 758943 1792020 RB1478 Rhodopirellula baltica SH 1 hypothetical protein NP_864435.1 756943 D 243090 CDS NP_864436.1 32471443 1795552 complement(758954..760687) 1 NC_005027.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 760687 ilvD 1795552 ilvD Rhodopirellula baltica SH 1 dihydroxy-acid dehydratase NP_864436.1 758954 R 243090 CDS NP_864437.1 32471444 1793544 760742..761509 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:E83580; conserved hypothetical protein PA0529 [imported] -; E=1e-34 pir:A69811; conserved hypothetical protein yflK - Bacillus subtilis; E=4e-32 pir:F83366; conserved hypothetical protein PA2229 [imported] -; E=2e-31 COG: PA0529; COG2258 Uncharacterized BCR; E=1e-35; hypothetical protein 761509 1793544 RB1481 Rhodopirellula baltica SH 1 hypothetical protein NP_864437.1 760742 D 243090 CDS NP_864438.1 32471445 1794885 761490..762293 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: gb:AAF12583.1; AE001826_52 (AE001826) sensor histidine; E=4e-09 pir:D75429; sensory box sensor histidine kinase - Deinococcus; E=5e-09 pir:A69158; sensory transduction histidine kinase - Methanobacterium; E=6e-08 COG: DRB0029_2; COG0642 Sensory transduction histidine kinases; E=4e-10 PFAM: PF02518; Histidine kinase-, DNA gyrase B-, p; E=6.3e-13; sensor histidine kinase/response regulator 762293 1794885 RB1483 Rhodopirellula baltica SH 1 sensor histidine kinase/response regulator NP_864438.1 761490 D 243090 CDS NP_864439.1 32471446 1791363 762303..764072 1 NC_005027.1 PMID: 9537320 best DB hits: BLAST: pir:F70423; DNA polymerase beta family - Aquifex aeolicus -----; E=1e-110 ddbj:BAB06826.1; (AP001517) DNA-dependent DNA polymerase beta; E=1e-105 pir:C69985; probable DNA-dependent DNA polymerase beta chain yshC -; E=1e-102 COG: aq_1422_1; COG1796 DNA polymerase IV (family X); E=4e-62 BH3107_2; COG1387 Histidinol phosphatase and related hydrolases of; E=4e-53 Ta0758_1; COG1796 DNA polymerase IV (family X); E=3e-51 PFAM: PF00966; DNA polymerase X family; E=6.5e-35 PF02231; PHP domain N-terminal region; E=1.3e-22 PF02811; PHP domain C-terminal region; E=1.6e-16; DNA polymerase beta family protein 764072 polB 1791363 polB Rhodopirellula baltica SH 1 DNA polymerase beta family protein NP_864439.1 762303 D 243090 CDS NP_864440.1 32471447 1790736 764104..764424 1 NC_005027.1 PMID: 10761919 best DB hits: BLAST: pir:D81801; conserved hypothetical protein NMA1764 [imported] -; E=2e-09 pir:G81066; conserved hypothetical protein NMB1575 [imported] -; E=2e-09 pir:F83200; conserved hypothetical protein PA3566 [imported] -; E=3e-07 COG: NMB1575; COG1359 Uncharacterized ACR; E=2e-10 PFAM: PF02619; Uncharacterized ACR, YneC family COG; E=1.7e-17; hypothetical protein 764424 1790736 RB1487 Rhodopirellula baltica SH 1 hypothetical protein NP_864440.1 764104 D 243090 CDS NP_864441.1 32471448 1789917 764421..766184 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB93736.1; (AL357613) thioredoxin reductase.; E=2e-67 pir:H72322; thioredoxin reductase - Thermotoga maritima (strain; E=2e-27 ddbj:BAB07290.1; (AP001519) thioredoxin reductase (NADPH); E=1e-26 COG: TM0869; COG0492 Thioredoxin reductase/alkyl hydroperoxide reductase; E=2e-28 VNG1259G; COG0492 Thioredoxin reductase/alkyl hydroperoxide; E=1e-21 aq_500; COG0492 Thioredoxin reductase/alkyl hydroperoxide reductase; E=1e-20 PFAM: PF00027; Cyclic nucleotide-binding domai; E=1.6e-07 PF00732; GMC oxidoreductases; E=0.87 PF01946; Thi4 family; E=0.0023; thioredoxin reductase 766184 trxB 1789917 trxB Rhodopirellula baltica SH 1 thioredoxin reductase NP_864441.1 764421 D 243090 CDS NP_864442.1 32471449 1791603 complement(766265..766600) 1 NC_005027.1 hypothetical protein 766600 1791603 RB1491 Rhodopirellula baltica SH 1 hypothetical protein NP_864442.1 766265 R 243090 CDS NP_864443.1 32471450 1795102 766339..766536 1 NC_005027.1 hypothetical protein 766536 1795102 RB1492 Rhodopirellula baltica SH 1 hypothetical protein NP_864443.1 766339 D 243090 CDS NP_864444.1 32471451 1792128 766403..766627 1 NC_005027.1 hypothetical protein 766627 1792128 RB1493 Rhodopirellula baltica SH 1 hypothetical protein NP_864444.1 766403 D 243090 CDS NP_864445.1 32471452 1795081 complement(766865..768280) 1 NC_005027.1 best DB hits: BLAST: pir:T34965; probable membrane protein - Streptomyces coelicolor; E=2e-09 gb:AAB06263.1; (L39876) ORF1; PepX [Caldicellulosiruptor; E=4e-04 pir:E75460; conserved hypothetical protein - Deinococcus radiodurans; E=0.002 COG: DR0919; COG1721 Uncharacterized ACR; E=2e-04 PFAM: PF01882; Protein of unknown function DUF58; E=7.1e-20; hypothetical protein 768280 1795081 RB1495 Rhodopirellula baltica SH 1 hypothetical protein NP_864445.1 766865 R 243090 CDS NP_864446.1 32471453 1791476 complement(768277..769395) 1 NC_005027.1 PMID: 10484179 best DB hits: BLAST: ddbj:BAB04323.1; (AP001509) methanol dehydrogenase regulatory; E=4e-87 pir:T34964; probable regulatory protein - Streptomyces coelicolor; E=6e-81 pir:H72289; hypothetical protein TM1132 - Thermotoga maritima; E=1e-80 COG: BH0604; COG0714 MoxR-like ATPases; E=4e-88 PFAM: PF00004; ATPase associated with va; E=4.6e-05 PF01078; Magnesium chelatase, subunit Chl; E=8e-14; methanol dehydrogenase regulatory protein 769395 moxR 1791476 moxR Rhodopirellula baltica SH 1 methanol dehydrogenase regulatory protein NP_864446.1 768277 R 243090 CDS NP_864447.1 32471454 1791022 769419..769571 1 NC_005027.1 hypothetical protein 769571 1791022 RB1501 Rhodopirellula baltica SH 1 hypothetical protein NP_864447.1 769419 D 243090 CDS NP_864448.1 32471455 1790853 769609..770010 1 NC_005027.1 PMID: 10524254 PMID: 12004073 best DB hits: BLAST: gb:AAF61932.1; (AF230804) sigma-54 activator protein Act1; E=1e-07 swissprot:Q00934; PILR_PSEAE TYPE 4 FIMBRIAE EXPRESSION REGULATORY; E=1e-06 pir:B70195; response regulatory protein (rrp-2) homolog - Lyme; E=1e-06 COG: PA4547; COG2204 AAA superfamily ATPases with N-terminal receiver; E=1e-07 BH1808; COG0745 Response regulators consisting of a CheY-like; E=6e-07 DRB0029_1; COG0784 CheY-like receiver domains; E=3e-06 PFAM: PF00072; Response regulator receiver doma; E=4.3e-14; response regulator 770010 1790853 RB1502 Rhodopirellula baltica SH 1 response regulator NP_864448.1 769609 D 243090 CDS NP_864449.1 32471456 1791010 769965..771212 1 NC_005027.1 hypothetical protein 771212 1791010 RB1503 Rhodopirellula baltica SH 1 hypothetical protein NP_864449.1 769965 D 243090 CDS NP_864450.1 32471457 1796628 complement(771198..772202) 1 NC_005027.1 PMID: 10910347 best DB hits: BLAST: swissprot:Q9PH56; MIAA_XYLFA TRNA; E=1e-44 swissprot:Q9KV12; MIAA_VIBCH TRNA; E=2e-44 swissprot:O30762; MIAA_PSEPU TRNA; E=4e-44 COG: XF0090; COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; E=1e-45 PFAM: PF01715; IPP transferase; E=3e-70; tRNA delta(2)-isopentenylpyrophosphate transferase 772202 miaA 1796628 miaA Rhodopirellula baltica SH 1 tRNA delta(2)-isopentenylpyrophosphate transferase NP_864450.1 771198 R 243090 CDS NP_864451.1 32471458 1796196 772233..772841 1 NC_005027.1 PMID: 3106324 best DB hits: BLAST: pir:D75017; n-terminal acetyltransferase PAB1098 - Pyrococcus abyssi; E=4e-05 pir:A71455; probable acetyltransferase - Pyrococcus horikoshii; E=2e-04 embl:CAA51674.1; (X73149) Nourseothricin acetyltransferase; E=3e-04 COG: PAB1098; COG0456 Acetyltransferases; E=4e-06 BS_yobR; COG0454 Histone acetyltransferase HPA2 and related; E=1e-04 PA4678; COG0456 Acetyltransferases; E=5e-04 PFAM: PF00583; Acetyltransferase (GNAT) family; E=3.8e-21; n-terminal acetyltransferase 772841 1796196 RB1508 Rhodopirellula baltica SH 1 n-terminal acetyltransferase NP_864451.1 772233 D 243090 CDS NP_864452.1 32471459 1796900 complement(772909..773379) 1 NC_005027.1 hypothetical protein 773379 1796900 RB1509 Rhodopirellula baltica SH 1 hypothetical protein NP_864452.1 772909 R 243090 CDS NP_864453.1 32471460 1794296 complement(773376..774995) 1 NC_005027.1 hypothetical protein 774995 1794296 RB1511 Rhodopirellula baltica SH 1 hypothetical protein NP_864453.1 773376 R 243090 CDS NP_864454.1 32471461 1790744 complement(774907..775203) 1 NC_005027.1 hypothetical protein 775203 1790744 RB1513 Rhodopirellula baltica SH 1 hypothetical protein NP_864454.1 774907 R 243090 CDS NP_864455.1 32471462 1796837 775037..775309 1 NC_005027.1 hypothetical protein 775309 1796837 RB1514 Rhodopirellula baltica SH 1 hypothetical protein NP_864455.1 775037 D 243090 CDS NP_864456.1 32471463 1790163 complement(775306..776193) 1 NC_005027.1 PMID: 9403685 best DB hits: BLAST: pir:G70121; conserved hypothetical protein BB0175 - Lyme disease; E=5e-14 swissprot:P71761; YE80_MYCTU HYPOTHETICAL 34.3 KDA PROTEIN RV1480; E=1e-11 pir:G82493; conserved hypothetical protein VCA0174 [imported] -; E=3e-09 COG: BB0175; COG1721 Uncharacterized ACR; E=4e-15 PFAM: PF01882; Protein of unknown function DUF; E=8.2e-16; hypothetical protein 776193 1790163 RB1516 Rhodopirellula baltica SH 1 hypothetical protein NP_864456.1 775306 R 243090 CDS NP_864457.1 32471464 1794900 complement(776190..776879) 1 NC_005027.1 PMID: 7542800 best DB hits: BLAST: pir:D83271; probable ATP-binding component of ABC transporter PA2987; E=2e-50 swissprot:P45247; LOLD_HAEIN LIPOPROTEIN RELEASING SYSTEM; E=2e-49 pir:D83071; probable ATP-binding component of ABC transporter PA4594; E=2e-48 COG: PA2987; COG1136 ABC-type (unclassified) transport system, ATPase; E=2e-51 PFAM: PF00006; ATP synthase alpha/beta family, n; E=0.11 PF01202; Shikimate kinase; E=0.46 PF00005; ABC transporter; E=1.7e-54; lipoprotein releasing system ATP-binding protein lolD 776879 lolD 1794900 lolD Rhodopirellula baltica SH 1 lipoprotein releasing system ATP-binding protein lolD NP_864457.1 776190 R 243090 CDS NP_864458.1 32471465 1796351 complement(776896..777078) 1 NC_005027.1 hypothetical protein 777078 1796351 RB1518 Rhodopirellula baltica SH 1 hypothetical protein NP_864458.1 776896 R 243090 CDS NP_864459.1 32471466 1790218 complement(777075..777299) 1 NC_005027.1 hypothetical protein 777299 1790218 RB1519 Rhodopirellula baltica SH 1 hypothetical protein NP_864459.1 777075 R 243090 CDS NP_864460.1 32471467 1789998 777178..777492 1 NC_005027.1 hypothetical protein 777492 1789998 RB1520 Rhodopirellula baltica SH 1 hypothetical protein NP_864460.1 777178 D 243090 CDS NP_864461.1 32471468 1795854 777494..778657 1 NC_005027.1 PMID: 8326859 best DB hits: BLAST: gb:AAF36472.1; AF127982_2 (AF127982) GspG [Burkholderia cepacia]; E=1e-04 ddbj:BAB18792.1; (AB050004) GspG [Burkholderia cepacia]; E=1e-04 gb:AAC83358.1; (AF092918) outer membrane secretion protein T; E=3e-04 COG: PA3101; COG2165 General secretory pathway proteins G and H and; E=2e-04 PFAM: PF00114; Pilin (bacterial filament); E=0.16; general secretion pathway protein G 778657 gspG 1795854 gspG Rhodopirellula baltica SH 1 general secretion pathway protein G NP_864461.1 777494 D 243090 CDS NP_864462.1 32471469 1790935 778654..779130 1 NC_005027.1 hypothetical protein 779130 1790935 RB1523 Rhodopirellula baltica SH 1 hypothetical protein NP_864462.1 778654 D 243090 CDS NP_864463.1 32471470 1791993 779301..780287 1 NC_005027.1 PMID: 11759840 best DB hits: BLAST: pir:S75044; hypothetical protein sll1606 - Synechocystis sp. (strain; E=0.004 pir:E70470; conserved hypothetical protein aq_1986 - Aquifex; E=0.005 COG: sll1606; COG1434 Uncharacterized ACR; E=3e-04 PFAM: PF02698; Uncharacterized ACR, COG1434; E=0.0017; hypothetical protein 780287 1791993 RB1526 Rhodopirellula baltica SH 1 hypothetical protein NP_864463.1 779301 D 243090 CDS NP_864464.1 32471471 1793927 complement(780317..781096) 1 NC_005027.1 PMID: 8083218 best DB hits: BLAST: gb:AAH00398.1; AAH00398 (BC000398) platelet-activating factor; E=3e-10 ref:XP_006434.1; platelet-activating factor acetylhydrolase,; E=3e-10 gb:AAC52997.1; (U57747) platelet-activating factor; E=1e-09 PFAM: PF00657; Lipase/Acylhydrolase with GDSL-li; E=0.00082 PF02266; Platelet activating factor acetyl; E=0.00029; platelet-activating factor acetylhydrolase IB gamma subunit 781096 pa1G 1793927 pa1G Rhodopirellula baltica SH 1 platelet-activating factor acetylhydrolase IB gamma subunit NP_864464.1 780317 R 243090 CDS NP_864465.1 32471472 1795498 781095..782537 1 NC_005027.1 PMID: 8590279 best DB hits: BLAST: swissprot:Q55914; Y309_SYNY3 HYPOTHETICAL METHYLTRANSFERASE; E=3e-26 swissprot:O58549; Y819_PYRHO HYPOTHETICAL METHYLTRANSFERASE PH0819; E=1e-23 swissprot:P42349; YC42_SYNY3 HYPOTHETICAL METHYLTRANSFERASE; E=2e-18 COG: slr0309; COG1032 Fe-S oxidoreductases family 2; E=3e-27; methyltransferase 782537 slr0309 1795498 slr0309 Rhodopirellula baltica SH 1 methyltransferase NP_864465.1 781095 D 243090 CDS NP_864466.1 32471473 1792010 782534..783889 1 NC_005027.1 hypothetical protein 783889 1792010 RB1531 Rhodopirellula baltica SH 1 hypothetical protein NP_864466.1 782534 D 243090 CDS NP_864467.1 32471474 1795412 complement(783980..785953) 1 NC_005027.1 PMID: 8969512 best DB hits: BLAST: pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=4e-36 swissprot:P54743; PKNA_MYCLE SERINETHREONINE-PROTEIN; E=7e-36 swissprot:P71585; PKNA_MYCTU SERINETHREONINE-PROTEIN; E=1e-35 COG: Rv0015c; COG0515 Serine/threonine protein kinases; E=1e-36 PFAM: PF00069; Protein kinase domain; E=2.4e-61; serine/threonine-protein kinase pknA 785953 pknA 1795412 pknA Rhodopirellula baltica SH 1 serine/threonine-protein kinase pknA NP_864467.1 783980 R 243090 CDS NP_864468.1 32471475 1791053 complement(785889..787091) 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB55728.1; (AL117387) hypothetical protein SCF41.25; E=1e-13 ddbj:BAA87752.1; (AB016260) Hypothetical gene [Agrobacterium; E=3e-06; hypothetical protein 787091 1791053 RB1533 Rhodopirellula baltica SH 1 hypothetical protein NP_864468.1 785889 R 243090 CDS NP_864469.1 32471476 1795143 787199..788518 1 NC_005027.1 hypothetical protein 788518 1795143 RB1535 Rhodopirellula baltica SH 1 hypothetical protein NP_864469.1 787199 D 243090 CDS NP_864470.1 32471477 1790706 complement(788614..790083) 1 NC_005027.1 PMID: 9163424 best DB hits: BLAST: gb:AAG45731.1; AF229441_2 (AF229441) y4yA [Sinorhizobium fredii]; E=7e-30 swissprot:P55709; Y4YA_RHISN HYPOTHETICAL 49.9 KD PROTEIN Y4YA; E=3e-29 gb:AAG45729.1; AF229440_2 (AF229440) y4yA [Sinorhizobium fredii]; E=3e-26 COG: sll0504; COG0019 Diaminopimelate decarboxylase; E=7e-08 PFAM: PF02784; Pyridoxal-dependent decarboxyla; E=0.71; diaminopimelate decarboxylase 790083 lysA 1790706 lysA Rhodopirellula baltica SH 1 diaminopimelate decarboxylase NP_864470.1 788614 R 243090 CDS NP_864471.1 32471478 1794046 complement(790376..790627) 1 NC_005027.1 hypothetical protein 790627 1794046 RB1542 Rhodopirellula baltica SH 1 hypothetical protein NP_864471.1 790376 R 243090 CDS NP_864472.1 32471479 1793420 790598..794395 1 NC_005027.1 PMID: 2677007 best DB hits: BLAST: swissprot:P45758; GSPD_ECOLI PROBABLE GENERAL SECRETION PATHWAY; E=5e-22 swissprot:P15644; GSPD_KLEPN GENERAL SECRETION PATHWAY PROTEIN D; E=2e-21 gb:AAA58785.1; (L33796) EpsD [Vibrio cholerae]; E=2e-18 COG: gspD; COG1450 General secretory pathway protein D; E=5e-23 PFAM: PF00263; Bacterial type II and III secret; E=2.9e-05; general secretion pathway protein D 794395 gspD 1793420 gspD Rhodopirellula baltica SH 1 general secretion pathway protein D NP_864472.1 790598 D 243090 CDS NP_864473.1 32471480 1791048 794448..794738 1 NC_005027.1 hypothetical protein 794738 1791048 RB1549 Rhodopirellula baltica SH 1 hypothetical protein NP_864473.1 794448 D 243090 CDS NP_864474.1 32471481 1793533 794665..795552 1 NC_005027.1 signal peptide 795552 1793533 RB1550 Rhodopirellula baltica SH 1 signal peptide NP_864474.1 794665 D 243090 CDS NP_864475.1 32471482 1796166 complement(795468..795656) 1 NC_005027.1 hypothetical protein 795656 1796166 RB1553 Rhodopirellula baltica SH 1 hypothetical protein NP_864475.1 795468 R 243090 CDS NP_864476.1 32471483 1794257 795676..795897 1 NC_005027.1 hypothetical protein 795897 1794257 RB1554 Rhodopirellula baltica SH 1 hypothetical protein NP_864476.1 795676 D 243090 CDS NP_864477.1 32471484 1794839 complement(795848..797278) 1 NC_005027.1 PMID: 10484179 best DB hits: BLAST: gb:AAC23913.1; (AF039207) NADH-dependent dehydrogenase homolog; E=1e-09 ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=1e-08 swissprot:Q54728; YJHC_STRPN HYPOTHETICAL PROTEIN IN NANB 3'REGION; E=3e-07 COG: BH1248; COG0673 Predicted dehydrogenases and related proteins; E=9e-10 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=3.2e-12; NADH-dependent dehydrogenase 797278 1794839 RB1555 Rhodopirellula baltica SH 1 NADH-dependent dehydrogenase NP_864477.1 795848 R 243090 CDS NP_864478.1 32471485 1793759 797241..797420 1 NC_005027.1 hypothetical protein 797420 1793759 RB1557 Rhodopirellula baltica SH 1 hypothetical protein NP_864478.1 797241 D 243090 CDS NP_864479.1 32471486 1789925 complement(797674..798255) 1 NC_005027.1 PMID: 9537320 best DB hits: BLAST: pir:A70471; phosphoglycerate mutase 1 - Aquifex aeolicus -----; E=4e-12 pir:A75439; probable phosphoglycerate mutase - Deinococcus; E=2e-11 pir:G72260; phosphoglycerate mutase - Thermotoga maritima (strain; E=2e-11 COG: aq_1990; COG0406 Phosphoglycerate mutase/fructose-2,6-bisphosphatase; E=4e-13 Rv2228c_2; COG0406 Phosphoglycerate; E=3e-05 slr1748; COG0406 Phosphoglycerate mutase/fructose-2,6-bisphosphatase; E=4e-05 PFAM: PF00300; Phosphoglycerate mutase; E=0.0029; phosphoglycerate mutase 798255 pgaM 1789925 pgaM Rhodopirellula baltica SH 1 phosphoglycerate mutase NP_864479.1 797674 R 243090 CDS NP_864480.1 32471487 1796370 complement(798252..798959) 1 NC_005027.1 PMID: 10625676 best DB hits: BLAST: pir:G82052; ribulose-phosphate 3-epimerase VC2625 [imported] -; E=1e-42 gb:AAK03703.1; (AE006199) Dod [Pasteurella multocida]; E=1e-40 gb:AAF01048.1; AF189365_1 (AF189365) D-ribulose-5-phosphate; E=3e-40 COG: VC2625; COG0036 Pentose-5-phosphate-3-epimerase; E=1e-43 PFAM: PF00834; Ribulose-phosphate 3 epimerase; E=1.8e-85; ribulose-phosphate 3-epimerase 798959 rpe 1796370 rpe Rhodopirellula baltica SH 1 ribulose-phosphate 3-epimerase NP_864480.1 798252 R 243090 CDS NP_864481.1 32471488 1796852 798934..799344 1 NC_005027.1 PMID: 10617197 best DB hits: BLAST: gb:AAC79586.1; (AC005727) DOF zinc finger protein; E=0.43; DOF zinc finger protein 799344 1796852 RB1563 Rhodopirellula baltica SH 1 DOF zinc finger protein NP_864481.1 798934 D 243090 CDS NP_864482.1 32471489 1790151 complement(799322..799552) 1 NC_005027.1 hypothetical protein 799552 1790151 RB1565 Rhodopirellula baltica SH 1 hypothetical protein NP_864482.1 799322 R 243090 CDS NP_864483.1 32471490 1794932 complement(799608..803093) 1 NC_005027.1 PMID: 10419967 best DB hits: BLAST: gb:AAK00351.1; AF329876_7 (AF329876) outer membrane protein; E=2e-10 embl:CAA32520.1; (X14336) gene IV product [Bacteriophage I2-2]; E=2e-08 pir:D82816; fimbrial assembly protein XF0373 [imported] - Xylella; E=4e-05 COG: XF0373; COG1450 General secretory pathway protein D; E=3e-06 PFAM: PF00263; Bacterial type II and III secretion; E=5.3e-20; general secretory pathway protein D 803093 comQ 1794932 comQ Rhodopirellula baltica SH 1 general secretory pathway protein D NP_864483.1 799608 R 243090 CDS NP_864484.1 32471491 1795706 803159..804853 1 NC_005027.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA; ATP-dependent DNA ligase 804853 dnlI 1795706 dnlI Rhodopirellula baltica SH 1 ATP-dependent DNA ligase NP_864484.1 803159 D 243090 CDS NP_864485.1 32471492 1790724 804850..804993 1 NC_005027.1 hypothetical protein 804993 1790724 RB1572 Rhodopirellula baltica SH 1 hypothetical protein NP_864485.1 804850 D 243090 CDS NP_864486.1 32471493 1794588 complement(804984..805094) 1 NC_005027.1 hypothetical protein 805094 1794588 RB1573 Rhodopirellula baltica SH 1 hypothetical protein NP_864486.1 804984 R 243090 CDS NP_864487.1 32471494 1795657 complement(805112..806164) 1 NC_005027.1 PMID: 8041620 best DB hits: BLAST: pir:S47803; hypothetical 33.7K protein (avtA-selB intergenic region); E=8e-07 swissprot:P37679; SGBU_ECOLI HEXULOSE-6-PHOSPHATE; E=8e-07 swissprot:P39305; SGAU_ECOLI HEXULOSE-6-PHOSPHATE; E=1e-05 COG: sgbU; COG1082 Predicted endonucleases; E=7e-08 PFAM: PF01319; Cholesterol oxidase; E=0.042; hexulose-6-phosphate isomerase 806164 sgbU 1795657 sgbU Rhodopirellula baltica SH 1 hexulose-6-phosphate isomerase NP_864487.1 805112 R 243090 CDS NP_864488.1 32471495 1795716 806289..808871 1 NC_005027.1 PMID: 8688087 best DB hits: BLAST: pir:D75091; large helicase-related protein (lhr-2) PAB0744 -; E=1e-73 ref:NP_071281.1; large helicase-related protein (lhr-2); E=4e-71 swissprot:Q57742; HELX_METJA ATP-DEPENDENT HELICASE; E=1e-70 COG: PAB0744; COG1201 Lhr-like helicases; E=1e-74 BS_yprA; COG1205 Distinct helicase with a unique C-terminal; E=5e-18 PFAM: PF00270; DEAD/DEAH box helicase; E=2.1e-16 PF00271; Helicase conserved C-terminal doma; E=5.5e-14; ATP-dependent helicase 808871 helX 1795716 helX Rhodopirellula baltica SH 1 ATP-dependent helicase NP_864488.1 806289 D 243090 CDS NP_864489.1 32471496 1794210 808911..810716 1 NC_005027.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 810716 glnS 1794210 glnS Rhodopirellula baltica SH 1 glutaminyl-tRNA synthetase NP_864489.1 808911 D 243090 CDS NP_864490.1 32471497 1790496 complement(810888..812492) 1 NC_005027.1 PMID: 7765282 best DB hits: BLAST: swissprot:P42663; CTAQ_THEAQ THERMOSTABLE CARBOXYPEPTIDASE 1; E=1e-105 swissprot:P50848; YPWA_BACSU HYPOTHETICAL 58.2 KDA PROTEIN IN; E=2e-90 gb:AAG20654.1; (AE005134) probable carboxypeptidase; Cxp; E=7e-90 COG: BS_ypwA; COG2317 Zn-dependent carboxypeptidases; E=2e-91 PFAM: PF02074; Carboxypeptidase Taq (M32) meta; E=2.1e-164; thermostable carboxypeptidase 1 812492 1790496 RB1579 Rhodopirellula baltica SH 1 thermostable carboxypeptidase 1 NP_864490.1 810888 R 243090 CDS NP_864491.1 32471498 1794535 complement(812517..814265) 1 NC_005027.1 hypothetical protein 814265 1794535 RB1581 Rhodopirellula baltica SH 1 hypothetical protein NP_864491.1 812517 R 243090 CDS NP_864492.1 32471499 1789901 814354..815736 1 NC_005027.1 PMID: 9537320 best DB hits: BLAST: ddbj:BAB07301.1; (AP001519) histidinol dehydrogenase [Bacillus; E=4e-88 swissprot:O66976; HISX_AQUAE HISTIDINOL DEHYDROGENASE (HDH); E=1e-87 gb:AAK05307.1; AE006353_6 (AE006353) histidinol dehydrogenase (EC; E=2e-85 COG: BH3582; COG0141 Histidinol dehydrogenase; E=4e-89 PFAM: PF00815; Histidinol dehydrogenase; E=2.7e-158; histidinol dehydrogenase 815736 hisD 1789901 hisD Rhodopirellula baltica SH 1 histidinol dehydrogenase NP_864492.1 814354 D 243090 CDS NP_864493.1 32471500 1791037 815812..817197 1 NC_005027.1 PMID: 8550484 best DB hits: BLAST: pir:T12022; 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); E=1e-50 pir:G81224; 3-oxoacyl-(acyl-carrier-protein) synthase II NMB0219; E=3e-48 pir:F81995; 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); E=7e-48 COG: PA2965; COG0304 3-oxoacyl-(acyl-carrier-protein) synthase I; E=1e-51 PFAM: PF00109; Beta-ketoacyl synthase, N-ter; E=2.3e-05 PF02801; Beta-ketoacyl synthase, C-ter; E=7.8e-51; 3-oxoacyl-ACP synthase 817197 fabF 1791037 fabF Rhodopirellula baltica SH 1 3-oxoacyl-ACP synthase NP_864493.1 815812 D 243090 CDS NP_864494.1 32471501 1796685 817362..817817 1 NC_005027.1 PMID: 8759840 best DB hits: BLAST: gb:AAB68774.1; (U94886) hemolysin [Brachyspira hyodysenteriae]; E=4e-04 embl:CAC08813.1; (AJ279022) acyl carrier protein; E=0.053 pir:T11213; probable acyl carrier protein - Streptomyces glaucescens; E=0.067; acyl carrier protein 817817 1796685 RB1588 Rhodopirellula baltica SH 1 acyl carrier protein NP_864494.1 817362 D 243090 CDS NP_864495.1 32471502 1796593 817929..819323 1 NC_005027.1 PMID: 2254247 best DB hits: BLAST: gb:AAF63149.1; AC011001_19 (AC011001) Similar to phytoene; E=7e-15 gb:AAG29233.1; AC079732_4 (AC079732) hypothetical protein; E=4e-12 ddbj:BAB05567.1; (AP001513) BH1848~unknown conserved protein in; E=6e-11 COG: BH1848; COG1233 Phytoene dehydrogenase and related proteins; E=6e-12 VC0806; COG2509 Uncharacterized FAD-dependent dehydrogenases; E=0.001 DR0093; COG1233 Phytoene dehydrogenase and related proteins; E=0.006 PFAM: PF02032; Phytoene dehydrogenase related; E=6.5e-05 PF01494; FAD binding domain; E=0.13 PF00070; Pyridine nucleotide-disulphide; E=2.2e-06; phytoene dehydrogenase 819323 crtI 1796593 crtI Rhodopirellula baltica SH 1 phytoene dehydrogenase NP_864495.1 817929 D 243090 CDS NP_864496.1 32471503 1793580 819486..821717 1 NC_005027.1 PMID: 4149369 best DB hits: BLAST: swissprot:P16100; IDH_AZOVI ISOCITRATE DEHYDROGENASE [NADP]; E=0.0 pir:B81143; isocitrate dehydrogenase NMB0920 [imported] - Neisseria; E=0.0 pir:B82236; isocitrate dehydrogenase VC1141 [imported] - Vibrio; E=0.0 COG: NMB0920; COG2838 Monomeric isocitrate dehydrogenase; E=0.0; isocitrate dehydrogenase 821717 icd 1793580 icd Rhodopirellula baltica SH 1 isocitrate dehydrogenase NP_864496.1 819486 D 243090 CDS NP_864497.1 32471504 1791879 complement(821695..821865) 1 NC_005027.1 hypothetical protein 821865 1791879 RB1594 Rhodopirellula baltica SH 1 hypothetical protein NP_864497.1 821695 R 243090 CDS NP_864498.1 32471505 1793699 821937..822953 1 NC_005027.1 PMID: 1544900 best DB hits: BLAST: swissprot:P10950; HIOM_BOVIN HYDROXYINDOLE O-METHYLTRANSFERASE; E=1e-48 swissprot:Q92056; HIOM_CHICK HYDROXYINDOLE O-METHYLTRANSFERASE; E=3e-48 embl:CAA75675.1; (Y15521) start position 1 [Homo sapiens]; E=5e-47 COG: Rv0567; COG0500 SAM-dependent methyltransferases; E=7e-32 PFAM: PF01047; MarR family; E=0.1 PF01022; Bacterial regulatory protein,; E=0.82 PF00891; O-methyltransferase; E=7.5e-53; hydroxyindole O-methyltransferase 822953 hioM 1793699 hioM Rhodopirellula baltica SH 1 hydroxyindole O-methyltransferase NP_864498.1 821937 D 243090 CDS NP_864499.1 32471506 1793778 complement(823056..823589) 1 NC_005027.1 PMID: 8037924 best DB hits: BLAST: swissprot:P30176; YBIA_ECOLI HYPOTHETICAL 18.7 KDA PROTEIN IN; E=3e-34 pir:A75416; conserved hypothetical protein - Deinococcus radiodurans; E=4e-05 pir:B83074; conserved hypothetical protein PA4580 [imported] -; E=1e-04 COG: ybiA; COG3236 Uncharacterized BCR; E=3e-35; hypothetical protein 823589 1793778 RB1597 Rhodopirellula baltica SH 1 hypothetical protein NP_864499.1 823056 R 243090 CDS NP_864500.1 32471507 1796704 823780..824676 1 NC_005027.1 signal peptide 824676 1796704 RB1599 Rhodopirellula baltica SH 1 signal peptide NP_864500.1 823780 D 243090 CDS NP_864501.1 32471508 1793853 complement(824636..824863) 1 NC_005027.1 hypothetical protein 824863 1793853 RB1601 Rhodopirellula baltica SH 1 hypothetical protein NP_864501.1 824636 R 243090 CDS NP_864502.1 32471509 1791089 complement(824894..825262) 1 NC_005027.1 hypothetical protein 825262 1791089 RB1602 Rhodopirellula baltica SH 1 hypothetical protein NP_864502.1 824894 R 243090 CDS NP_864503.1 32471510 1790963 complement(824944..825177) 1 NC_005027.1 hypothetical protein 825177 1790963 RB1603 Rhodopirellula baltica SH 1 hypothetical protein NP_864503.1 824944 R 243090 CDS NP_864504.1 32471511 1794551 complement(825174..826373) 1 NC_005027.1 best DB hits: BLAST: pir:D69820; hypothetical protein yhaZ - Bacillus subtilis -----; E=8e-39 embl:CAB40602.1; (AJ010140) DNA alkylation repair enzyme; E=2e-33 gb:AAK03834.1; (AE006212) unknown [Pasteurella multocida]; E=6e-17; hypothetical protein 826373 1794551 RB1604 Rhodopirellula baltica SH 1 hypothetical protein NP_864504.1 825174 R 243090 CDS NP_864505.1 32471512 1796851 complement(826325..827041) 1 NC_005027.1 PMID: 8156986 best DB hits: BLAST: pir:H83380; O6-methylguanine-DNA methyltransferase PA2118 [imported]; E=9e-29 gb:AAA23413.1; (M10315) Ada polyprotein [Escherichia coli]; E=7e-26 pdb:1SFE; Ada O6-Methylguanine-Dna Methyltransferase From; E=7e-26 COG: PA2118_2; COG0350 Methylated DNA-protein cysteine methyltransferase; E=5e-29 PFAM: PF01035; 6-O-methylguanine DNA methyltr; E=3.9e-33; O-6-methylguanine-DNA methyltransferase (ada) 827041 1796851 RB1606 Rhodopirellula baltica SH 1 O-6-methylguanine-DNA methyltransferase (ada) NP_864505.1 826325 R 243090 CDS NP_864506.1 32471513 1795652 complement(827078..828247) 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAC16441.1; (AL450165) esterase [Streptomyces; E=2e-40 pir:A69744; beta-lactamase homolog ybbE - Bacillus subtilis -----; E=5e-37 embl:CAB94057.1; (AL358672) secreted protein.; E=3e-32 COG: BS_ybbE; COG1680 Beta-lactamase class C and other penicillin binding; E=5e-38; esterase 828247 1795652 RB1608 Rhodopirellula baltica SH 1 esterase NP_864506.1 827078 R 243090 CDS NP_864507.1 32471514 1794288 828234..828545 1 NC_005027.1 hypothetical protein 828545 1794288 RB1609 Rhodopirellula baltica SH 1 hypothetical protein NP_864507.1 828234 D 243090 CDS NP_864508.1 32471515 1795984 828556..830181 1 NC_005027.1 PMID: 7744061 best DB hits: BLAST: pir:S69336; arylsulfatase (EC 3.1.6.1) - Pseudomonas aeruginosa; E=4e-77 swissprot:P51691; ARS_PSEAE ARYLSULFATASE (ARYL-SULFATE; E=1e-76 gb:AAF71375.1; AF262989_2 (AF262989) arylsulfatase [Klebsiella; E=6e-57 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=9e-78 PFAM: PF00884; Sulfatase; E=3.2e-102; arylsulfatase 830181 aslA 1795984 aslA Rhodopirellula baltica SH 1 arylsulfatase NP_864508.1 828556 D 243090 CDS NP_864509.1 32471516 1791664 complement(830421..833492) 1 NC_005027.1 best DB hits: PFAM: PF00882; Zinc dependent phospholipase C; E=0.41; hypothetical protein 833492 1791664 RB1611 Rhodopirellula baltica SH 1 hypothetical protein NP_864509.1 830421 R 243090 CDS NP_864510.1 32471517 1794035 complement(833623..834021) 1 NC_005027.1 hypothetical protein 834021 1794035 RB1617 Rhodopirellula baltica SH 1 hypothetical protein NP_864510.1 833623 R 243090 CDS NP_864511.1 32471518 1792106 833743..834036 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB95808.1; (AL359949) large transcriptional; E=0.35; transcriptional regulator 834036 1792106 RB1618 Rhodopirellula baltica SH 1 transcriptional regulator NP_864511.1 833743 D 243090 CDS NP_864512.1 32471519 1792487 complement(834309..835361) 1 NC_005027.1 PMID: 11756688 best DB hits: BLAST: pir:A82542; conserved hypothetical protein XF2574 [imported] -; E=0.028 pir:T29446; hypothetical protein - Streptomyces coelicolor -----; E=0.57 COG: XF2574; COG0671 Membrane-associated phospholipid phosphatase; E=0.003 PFAM: PF01569; PAP2 superfamily; E=0.00063; hypothetical protein 835361 1792487 RB1621 Rhodopirellula baltica SH 1 hypothetical protein NP_864512.1 834309 R 243090 CDS NP_864513.1 32471520 1795946 complement(835452..835745) 1 NC_005027.1 hypothetical protein 835745 1795946 RB1624 Rhodopirellula baltica SH 1 hypothetical protein NP_864513.1 835452 R 243090 CDS NP_864514.1 32471521 1791438 835894..836406 1 NC_005027.1 PMID: 10761919 best DB hits: BLAST: pir:G81831; probable integral membrane protein NMA2020 [imported] -; E=0.43 pir:F81195; conserved hypothetical protein NMB0465 [imported] -; E=0.55; hypothetical protein 836406 1791438 RB1628 Rhodopirellula baltica SH 1 hypothetical protein NP_864514.1 835894 D 243090 CDS NP_864515.1 32471522 1791051 836521..837594 1 NC_005027.1 PMID: 9620975 best DB hits: BLAST: pir:T44787; glucokinase (EC 2.7.1.2) [imported] - Bacillus; E=3e-32 swissprot:P54495; GLK_BACSU GLUCOKINASE (GLUCOSE KINASE) -----; E=8e-32 ddbj:BAB04516.1; (AP001509) glucose kinase [Bacillus halodurans]; E=4e-30 COG: BS_glcK; COG1940 Transcriptional regulators; E=8e-33 PFAM: PF00370; FGGY family of carbohydrate kinases; E=0.071 PF00480; ROK family; E=3.3e-37; glucokinase 837594 glcK 1791051 glcK Rhodopirellula baltica SH 1 glucokinase NP_864515.1 836521 D 243090 CDS NP_864516.1 32471523 1790658 837642..839456 1 NC_005027.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 839456 lepA 1790658 lepA Rhodopirellula baltica SH 1 GTP-binding protein LepA NP_864516.1 837642 D 243090 CDS NP_864517.1 32471524 1793882 839673..840332 1 NC_005027.1 hypothetical protein 840332 1793882 RB1632 Rhodopirellula baltica SH 1 hypothetical protein NP_864517.1 839673 D 243090 CDS NP_864518.1 32471525 1794030 complement(840418..840678) 1 NC_005027.1 hypothetical protein 840678 1794030 RB1633 Rhodopirellula baltica SH 1 hypothetical protein NP_864518.1 840418 R 243090 CDS NP_864519.1 32471526 1791296 840611..841732 1 NC_005027.1 hypothetical protein 841732 1791296 RB1634 Rhodopirellula baltica SH 1 hypothetical protein NP_864519.1 840611 D 243090 CDS NP_864520.1 32471527 1793729 complement(841696..841806) 1 NC_005027.1 hypothetical protein 841806 1793729 RB1636 Rhodopirellula baltica SH 1 hypothetical protein NP_864520.1 841696 R 243090 CDS NP_864521.1 32471528 1796578 841858..842517 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB61668.1; (AL133213) glycosyl transferase.; E=4e-32 embl:CAC15463.1; (AJ294477) polyprenol phosphate; E=7e-29 embl:CAB11300.1; (Z98604) hypothetical protein MLCB2052.02; E=1e-28 COG: Rv2051c_2; COG0463 Glycosyltransferases involved in cell wall; E=2e-29 PFAM: PF00535; Glycosyl transferase; E=1.6e-19; glycosyl transferase 842517 1796578 RB1637 Rhodopirellula baltica SH 1 glycosyl transferase NP_864521.1 841858 D 243090 CDS NP_864522.1 32471529 1797114 842521..842718 1 NC_005027.1 hypothetical protein 842718 1797114 RB1638 Rhodopirellula baltica SH 1 hypothetical protein NP_864522.1 842521 D 243090 CDS NP_864523.1 32471530 1796872 complement(842623..844422) 1 NC_005027.1 PMID: 11823852 best DB hits: BLAST: gb:AAF54264.1; (AE003680) CG8032 gene product [Drosophila; E=0.033 embl:CAB59668.1; (AL132674) monooxygenase. [Streptomyces; E=0.19 pir:A83453; probable flavin-containing monooxygenase PA1538; E=0.44 PFAM: PF01494; FAD binding domain; E=0.0018 PF00070; Pyridine nucleotide-disulphide; E=0.013 PF01593; Flavin containing amine oxidase; E=0.25; monooxygenase 844422 1796872 RB1639 Rhodopirellula baltica SH 1 monooxygenase NP_864523.1 842623 R 243090 CDS NP_864524.1 32471531 1796632 complement(844308..845327) 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S74922; hypothetical protein slr0681 - Synechocystis sp. (strain; E=8e-56 pir:H82064; conserved hypothetical protein VC2522 [imported] -; E=2e-33 gb:AAK02512.1; (AE006079) unknown [Pasteurella multocida]; E=8e-33 COG: slr0681; COG0530 Ca2+/Na+ antiporter; E=7e-57 PFAM: PF01699; Sodium/calcium exchanger protein; E=6.8e-32; sodium/calcium antiporter 845327 1796632 RB1641 Rhodopirellula baltica SH 1 sodium/calcium antiporter NP_864524.1 844308 R 243090 CDS NP_864525.1 32471532 1790757 complement(845453..845824) 1 NC_005027.1 signal peptide 845824 1790757 RB1644 Rhodopirellula baltica SH 1 signal peptide NP_864525.1 845453 R 243090 CDS NP_864526.1 32471533 1793936 complement(845881..846090) 1 NC_005027.1 hypothetical protein 846090 1793936 RB1646 Rhodopirellula baltica SH 1 hypothetical protein NP_864526.1 845881 R 243090 CDS NP_864527.1 32471534 1793111 complement(846118..846423) 1 NC_005027.1 hypothetical protein 846423 1793111 RB1648 Rhodopirellula baltica SH 1 hypothetical protein NP_864527.1 846118 R 243090 CDS NP_864528.1 32471535 1795360 846528..846692 1 NC_005027.1 hypothetical protein 846692 1795360 RB1649 Rhodopirellula baltica SH 1 hypothetical protein NP_864528.1 846528 D 243090 CDS NP_864529.1 32471536 1796716 complement(846661..847752) 1 NC_005027.1 signal peptide 847752 1796716 RB1650 Rhodopirellula baltica SH 1 signal peptide NP_864529.1 846661 R 243090 CDS NP_864530.1 32471537 1795235 847756..848766 1 NC_005027.1 PMID: 8688087 best DB hits: BLAST: swissprot:Q57970; Y550_METJA HYPOTHETICAL PROTEIN MJ0550 -----; E=2e-04 gb:AAG20125.1; (AE005091) Vng1941c [Halobacterium sp. NRC-1]; E=0.006 gb:AAB90230.1; (AE001034) conserved hypothetical protein; E=0.15 COG: MJ0550; COG1244 Predicted Fe-S oxidoreductases; E=2e-05; Fe-S oxidoreductase 848766 1795235 RB1651 Rhodopirellula baltica SH 1 Fe-S oxidoreductase NP_864530.1 847756 D 243090 CDS NP_864531.1 32471538 1792380 848744..850276 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: gb:AAB97506.1; (U74493) halogenase PrnC [Pseudomonas fluorescens]; E=3e-22 gb:AAD46367.1; AF161185_2 (AF161185) PrnC [Myxococcus fulvus]; E=1e-21 gb:AAD46372.1; AF161186_3 (AF161186) PrnC [Burkholderia; E=2e-21 PFAM: PF01494; FAD binding domain; E=0.009 PF01224; FAD-dependent glycerol-3-phos; E=0.048 PF00070; Pyridine nucleotide-disulphid; E=0.0082; halogenase 850276 prnC 1792380 prnC Rhodopirellula baltica SH 1 halogenase NP_864531.1 848744 D 243090 CDS NP_864532.1 32471539 1793849 complement(850438..853065) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:C83287; hypothetical protein PA2870 [imported] - Pseudomonas; E=4e-29 pir:H70302; conserved hypothetical protein aq_035 - Aquifex aeolicus; E=1e-26 pir:A71678; probable response regulatory protein RP237 - Rickettsia; E=9e-24 COG: PA2870; COG2199 Diguanylate cyclase/phosphodiesterase domain 1; E=4e-30 TM1594; COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF); E=1e-22 PA0290_2; COG2199 Diguanylate cyclase/phosphodiesterase domain 1; E=1e-22 PFAM: PF00989; PAS domain; E=2.5e-05 PF00990; GGDEF domain; E=5.9e-52 PF01966; HD domain; E=1.2e-17; hypothetical protein 853065 1793849 RB1656 Rhodopirellula baltica SH 1 hypothetical protein NP_864532.1 850438 R 243090 CDS NP_864533.1 32471540 1792276 complement(853319..876469) 1 NC_005027.1 PMID: 96163873 best DB hits: BLAST: embl:CAA60685.1; (X87241) homologue of Drosophila Fat protein [Homo; E=3e-18 embl:CAB65271.1; (AJ250768) mouse fat 1 cadherin [Mus musculus]; E=1e-17 PFAM: PF00054; Laminin G domain; E=0.3 PF00354; Pentaxin family; E=3.9e-10 PF00059; Lectin C-type domain; E=0.00071; hypothetical protein 876469 1792276 RB1661 Rhodopirellula baltica SH 1 hypothetical protein NP_864533.1 853319 R 243090 CDS NP_864534.1 32471541 1793052 876145..878211 1 NC_005027.1 best DB hits: PFAM: PF02321; Outer membrane efflux protein; E=5.9e-09; hypothetical protein 878211 1793052 RB1677 Rhodopirellula baltica SH 1 hypothetical protein NP_864534.1 876145 D 243090 CDS NP_864535.1 32471542 1789980 878180..879145 1 NC_005027.1 PMID: 9537320 best DB hits: BLAST: pir:C70415; cation efflux system (czcB-like) - Aquifex aeolicus; E=1e-10 gb:AAK03081.1; (AE006139) unknown [Pasteurella multocida]; E=7e-09 pir:B82357; conserved hypothetical protein VC0165 [imported] -; E=5e-08 COG: aq_1331; COG0845 Membrane-fusion protein; E=1e-11 ydhJ; COG1566 Multidrug resistance efflux pump; E=7e-06 XF0244; COG0845 Membrane-fusion protein; E=3e-05 PFAM: PF00364; Biotin-requiring enzyme; E=0.14 PF00529; HlyD family secretion protein; E=0.0021; cation efflux system (czcB-like) 879145 czcB 1789980 czcB Rhodopirellula baltica SH 1 cation efflux system (czcB-like) NP_864535.1 878180 D 243090 CDS NP_864536.1 32471543 1796513 complement(879132..879287) 1 NC_005027.1 hypothetical protein 879287 1796513 RB1682 Rhodopirellula baltica SH 1 hypothetical protein NP_864536.1 879132 R 243090 CDS NP_864537.1 32471544 1791999 879292..880590 1 NC_005027.1 PMID: 11466286 best DB hits: BLAST: ddbj:BAA96518.1; (AB044351) ORFE [Pseudomonas syringae]; E=9e-04 pir:D82709; colicin V secretion protein XF1216 [imported] - Xylella; E=0.002 pir:B83186; probable RND efflux membrane fusion protein precursor; E=0.003 COG: XF1216; COG0845 Membrane-fusion protein; E=2e-04 PA3136; COG1566 Multidrug resistance efflux pump; E=0.003 PA4374; COG0845 Membrane-fusion protein; E=0.007 PFAM: PF00529; HlyD family secretion protein; E=0.034; hypothetical protein 880590 1791999 RB1685 Rhodopirellula baltica SH 1 hypothetical protein NP_864537.1 879292 D 243090 CDS NP_864538.1 32471545 1792801 880530..882947 1 NC_005027.1 PMID: 7542800 best DB hits: BLAST: pir:G64100; hypothetical protein HI0894 - Haemophilus influenzae; E=0.077 swissprot:Q57500; Y894_HAEIN HYPOTHETICAL PROTEIN HI0894 -----; E=0.077 COG: HIN0311; COG0845 Membrane-fusion protein; E=0.007 PFAM: PF02163; Sterol-regulatory element bind; E=0.011 PF00364; Biotin-requiring enzyme; E=0.088; hypothetical protein 882947 1792801 RB1688 Rhodopirellula baltica SH 1 hypothetical protein NP_864538.1 880530 D 243090 CDS NP_864539.1 32471546 1790817 complement(883025..885748) 1 NC_005027.1 signal peptide 885748 1790817 RB1691 Rhodopirellula baltica SH 1 signal peptide NP_864539.1 883025 R 243090 CDS NP_864540.1 32471547 1793314 complement(885645..886064) 1 NC_005027.1 hypothetical protein 886064 1793314 RB1695 Rhodopirellula baltica SH 1 hypothetical protein NP_864540.1 885645 R 243090 CDS NP_864541.1 32471548 1797049 complement(886018..887502) 1 NC_005027.1 PMID: 8688087 best DB hits: BLAST: swissprot:Q57571; Y107_METJA HYPOTHETICAL PROTEIN MJ0107 -----; E=5e-21 gb:AAB89833.1; (AE001006) dihydropteroate synthase [Archaeoglobus; E=1e-20 pir:H69099; conserved hypothetical protein MTH1741 -; E=1e-16 COG: MJ0107; COG0294 Dihydropteroate synthase; E=5e-22; dihydropteroate synthase 887502 1797049 RB1696 Rhodopirellula baltica SH 1 dihydropteroate synthase NP_864541.1 886018 R 243090 CDS NP_864542.1 32471549 1794950 complement(887580..888584) 1 NC_005027.1 signal peptide 888584 1794950 RB1699 Rhodopirellula baltica SH 1 signal peptide NP_864542.1 887580 R 243090 CDS NP_864543.1 32471550 1796012 complement(888722..889426) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: gb:AAG58375.1; AE005552_5 (AE005552) orf, hypothetical protein; E=7e-18 swissprot:P25536; YHDE_ECOLI PROTEIN YHDE ----- pir: JQ1271; E=1e-17 gb:AAA58051.1; (U18997) ORF_f217; orfE of ECMRED, uses 2nd start; E=1e-17 COG: yhdE; COG0424 Nucleotide-binding protein implicated in inhibition of; E=1e-18 BH3033; COG0424 Nucleotide-binding protein implicated in inhibition; E=2e-18 yceF; COG0424 Nucleotide-binding protein implicated in inhibition of; E=4e-08 PFAM: PF02545; Maf-like protein; E=9.4e-36; maf protein 889426 1796012 RB1703 Rhodopirellula baltica SH 1 maf protein NP_864543.1 888722 R 243090 CDS NP_864544.1 32471551 1790842 complement(889423..889617) 1 NC_005027.1 hypothetical protein 889617 1790842 RB1704 Rhodopirellula baltica SH 1 hypothetical protein NP_864544.1 889423 R 243090 CDS NP_864545.1 32471552 1794156 889577..889921 1 NC_005027.1 hypothetical protein 889921 1794156 RB1705 Rhodopirellula baltica SH 1 hypothetical protein NP_864545.1 889577 D 243090 CDS NP_864546.1 32471553 1792727 889863..891638 1 NC_005027.1 PMID: 8288535 best DB hits: BLAST: swissprot:P35887; DNAA_CAUCR CHROMOSOMAL REPLICATION INITIATOR; E=7e-35 gb:AAD42393.1; AF157493_1 (AF157493) chromosomal replication; E=2e-34 swissprot:P05648; DNAA_BACSU CHROMOSOMAL REPLICATION INITIATOR; E=4e-33 COG: BS_dnaA; COG0593 ATPase involved in DNA replication initiation; E=4e-34 PFAM: PF00004; ATPase associated with vari; E=0.014 PF00308; Bacterial dnaA protein; E=2.7e-42; chromosome replication initiator DnaA 891638 dnaA 1792727 dnaA Rhodopirellula baltica SH 1 chromosome replication initiator DnaA NP_864546.1 889863 D 243090 CDS NP_864547.1 32471554 1790696 891742..893190 1 NC_005027.1 PMID: 7584024 best DB hits: BLAST: pir:T36598; probable replicative DNA helicase - Streptomyces; E=4e-86 pir:G75504; replicative DNA helicase - Deinococcus radiodurans; E=2e-83 gb:AAD19901.1; (AF100420) DnaB replication fork helicase [Thermus; E=1e-80 COG: DR0549; COG0305 Replicative DNA helicase; E=2e-84 PFAM: PF00772; DnaB-like helicase; E=2.9e-138; replicative DNA helicase 893190 dnaB 1790696 dnaB Rhodopirellula baltica SH 1 replicative DNA helicase NP_864547.1 891742 D 243090 CDS NP_864548.1 32471555 1792033 complement(893245..893643) 1 NC_005027.1 hypothetical protein 893643 1792033 RB1709 Rhodopirellula baltica SH 1 hypothetical protein NP_864548.1 893245 R 243090 CDS NP_864549.1 32471556 1796210 complement(893669..894961) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: ddbj:BAA14000.1; (D89625) adenylate cyclase [Anabaena sp.]; E=3e-17 pir:T17197; adenylate cyclase homolog - Spirulina platensis -----; E=1e-16 embl:CAC01253.1; (AJ243734) hydrogenase transcriptional; E=1e-13 COG: PA2572; COG2204 AAA superfamily ATPases with N-terminal receiver; E=6e-13 VC1087_1; COG0784 CheY-like receiver domains; E=7e-10 VCA0142; COG2204 AAA superfamily ATPases with N-terminal receiver; E=3e-08 PFAM: PF00072; Response regulator receiver doma; E=4.4e-17; two-component response regulator 894961 1796210 RB1711 Rhodopirellula baltica SH 1 two-component response regulator NP_864549.1 893669 R 243090 CDS NP_864550.1 32471557 1794946 complement(895046..895279) 1 NC_005027.1 hypothetical protein 895279 1794946 RB1713 Rhodopirellula baltica SH 1 hypothetical protein NP_864550.1 895046 R 243090 CDS NP_864551.1 32471558 1794306 895216..895536 1 NC_005027.1 hypothetical protein 895536 1794306 RB1714 Rhodopirellula baltica SH 1 hypothetical protein NP_864551.1 895216 D 243090 CDS NP_864552.1 32471559 1790304 complement(895557..895805) 1 NC_005027.1 hypothetical protein 895805 1790304 RB1716 Rhodopirellula baltica SH 1 hypothetical protein NP_864552.1 895557 R 243090 CDS NP_864553.1 32471560 1796891 complement(895876..897501) 1 NC_005027.1 PMID: 11214968; signal peptide 897501 1796891 RB1717 Rhodopirellula baltica SH 1 signal peptide NP_864553.1 895876 R 243090 CDS NP_864554.1 32471561 1796255 complement(897548..897697) 1 NC_005027.1 hypothetical protein 897697 1796255 RB1721 Rhodopirellula baltica SH 1 hypothetical protein NP_864554.1 897548 R 243090 CDS NP_864555.1 32471562 1797021 897688..899643 1 NC_005027.1 PMID: 2402464 best DB hits: BLAST: swissprot:P23701; OM6_CHLPS 60 KDA OUTER MEMBRANE PROTEIN; E=2e-05 pir:B39439; 60K cysteine-rich outer membrane protein 1 precursor -; E=2e-05 pir:JC5204; 60K cysteine-rich outer membrane protein 2 precursor -; E=2e-05; hypothetical protein 899643 1797021 RB1722 Rhodopirellula baltica SH 1 hypothetical protein NP_864555.1 897688 D 243090 CDS NP_864556.1 32471563 1790524 complement(899633..899926) 1 NC_005027.1 hypothetical protein 899926 1790524 RB1726 Rhodopirellula baltica SH 1 hypothetical protein NP_864556.1 899633 R 243090 CDS NP_864557.1 32471564 1796173 899954..900811 1 NC_005027.1 PMID: 8867804 best DB hits: BLAST: swissprot:P39139; YXXB_BACSU HYPOTHETICAL 31.8 KD PROTEIN IN DEOR; E=6e-24 pir:S49453; hypothetical protein - Bacillus subtilis ----- embl:; E=4e-04; hypothetical protein 900811 1796173 RB1728 Rhodopirellula baltica SH 1 hypothetical protein NP_864557.1 899954 D 243090 CDS NP_864558.1 32471565 1794232 complement(900784..901146) 1 NC_005027.1 PMID: 9698324 best DB hits: BLAST: gb:AAC31910.1; (AF076291) Rab-GDP dissociation inhibitor [Gallus; E=0.081 embl:CAA52412.1; (X74401) rab GDI beta [Rattus norvegicus]; E=0.36 gb:AAA78786.1; (L36314) GDP dissociation inhibitor beta [Mus; E=0.36; Rab-GDP dissociation inhibitor 901146 1794232 RB1729 Rhodopirellula baltica SH 1 Rab-GDP dissociation inhibitor NP_864558.1 900784 R 243090 CDS NP_864559.1 32471566 1795638 901162..902025 1 NC_005027.1 PMID: 10710307 best DB hits: BLAST: pir:D81118; conserved hypothetical protein ankyrin-related protein; E=3e-42 pir:C81903; hypothetical protein NMA1343 [imported] - Neisseria; E=9e-28 gb:AAF61702.1; AF222766_1 (AF222766) ankyrin 1 [Bos taurus]; E=1e-05 COG: NMB1133_2; COG0666 Ankyrin repeat proteins; E=7e-05 PFAM: PF00023; Ank repeat; E=0.0093; ankyrin-like protein 902025 1795638 RB1731 Rhodopirellula baltica SH 1 ankyrin-like protein NP_864559.1 901162 D 243090 CDS NP_864560.1 32471567 1796515 902108..903019 1 NC_005027.1 PMID: 10910347 best DB hits: BLAST: pir:H82556; beta-alanine synthetase XF2443 [imported] - Xylella; E=6e-16 pir:G75156; hypothetical protein PAB0277 - Pyrococcus abyssi (strain; E=3e-13 gb:AAF87102.1; AF284573_1 (AF284573) Nit protein 2 [Mus musculus]; E=4e-12 COG: XF2443; COG0388 Predicted amidohydrolase; E=6e-17 PFAM: PF00795; Carbon-nitrogen hydrolase; E=1.2e-40; beta-alanine synthetase 903019 1796515 RB1732 Rhodopirellula baltica SH 1 beta-alanine synthetase NP_864560.1 902108 D 243090 CDS NP_864561.1 32471568 1791393 902989..903450 1 NC_005027.1 hypothetical protein 903450 1791393 RB1734 Rhodopirellula baltica SH 1 hypothetical protein NP_864561.1 902989 D 243090 CDS NP_864562.1 32471569 1790700 complement(903453..905321) 1 NC_005027.1 PMID: 10336424 best DB hits: BLAST: gb:AAF30402.1; AF109924_1 (AF109924) sulfatase 1 precursor [Helix; E=2e-35 gb:AAF71377.1; AF262990_2 (AF262990) arylsulfatase [Klebsiella; E=2e-30 gb:AAF71375.1; AF262989_2 (AF262989) arylsulfatase [Klebsiella; E=3e-30 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=2e-23 yejM; COG3083 Predicted hydrolase of alkaline phosphatase; E=0.008 PFAM: PF00884; Sulfatase; E=5e-46; arylsulfatase 905321 1790700 RB1736 Rhodopirellula baltica SH 1 arylsulfatase NP_864562.1 903453 R 243090 CDS NP_864563.1 32471570 1794266 905535..906599 1 NC_005027.1 PMID: 9634230 best DB hits: BLAST: pir:A70710; hypothetical protein Rv0790c - Mycobacterium; E=8e-07 pir:A69206; hypothetical protein MTH795 - Methanobacterium; E=2e-05 pir:D70818; hypothetical protein Rv1673c - Mycobacterium; E=2e-05 COG: Rv0790c; COG1305 transglutaminases, cysteine; E=8e-08 PFAM: PF01841; Transglutaminase-like superfam; E=9e-08; hypothetical protein 906599 1794266 RB1739 Rhodopirellula baltica SH 1 hypothetical protein NP_864563.1 905535 D 243090 CDS NP_864564.1 32471571 1790539 906681..907538 1 NC_005027.1 PMID: 7516791 best DB hits: BLAST: swissprot:P46536; PYRK_BACCL DIHYDROOROTATE DEHYDROGENASE ELECTRON; E=1e-21 swissprot:Q58841; PYRK_METJA PROBABLE DIHYDROOROTATE DEHYDROGENASE; E=1e-17 swissprot:O27280; PYRK_METTH PROBABLE DIHYDROOROTATE DEHYDROGENASE; E=1e-16 COG: MJ1446; COG0543 2-polyprenylphenol hydroxylase and related; E=1e-18 PFAM: PF00970; Oxidoreductase FAD-binding doma; E=0.3; dihydroorotate dehydrogenase electron transfer subunit 907538 pyrK 1790539 pyrK Rhodopirellula baltica SH 1 dihydroorotate dehydrogenase electron transfer subunit NP_864564.1 906681 D 243090 CDS NP_864565.1 32471572 1793390 complement(907629..908654) 1 NC_005027.1 best DB hits: BLAST: pir:E82656; conserved hypothetical protein XF1630 [imported] -; E=5e-06 pir:T35300; probable transcriptional regulator - Streptomyces; E=3e-04 pir:D69900; conserved hypothetical protein yobV - Bacillus subtilis; E=0.003 COG: XF1630; COG2378 Predicted transcriptional regulator; E=5e-07; transcriptional regulator 908654 1793390 RB1743 Rhodopirellula baltica SH 1 transcriptional regulator NP_864565.1 907629 R 243090 CDS NP_864566.1 32471573 1796858 complement(908757..909608) 1 NC_005027.1 hypothetical protein 909608 1796858 RB1746 Rhodopirellula baltica SH 1 hypothetical protein NP_864566.1 908757 R 243090 CDS NP_864567.1 32471574 1792064 complement(909562..909759) 1 NC_005027.1 hypothetical protein 909759 1792064 RB1748 Rhodopirellula baltica SH 1 hypothetical protein NP_864567.1 909562 R 243090 CDS NP_864568.1 32471575 1794496 complement(909615..909824) 1 NC_005027.1 hypothetical protein 909824 1794496 RB1749 Rhodopirellula baltica SH 1 hypothetical protein NP_864568.1 909615 R 243090 CDS NP_864569.1 32471576 1796327 909661..909837 1 NC_005027.1 hypothetical protein 909837 1796327 RB1750 Rhodopirellula baltica SH 1 hypothetical protein NP_864569.1 909661 D 243090 CDS NP_864570.1 32471577 1793851 complement(909821..910027) 1 NC_005027.1 hypothetical protein 910027 1793851 RB1751 Rhodopirellula baltica SH 1 hypothetical protein NP_864570.1 909821 R 243090 CDS NP_864571.1 32471578 1794396 910005..910466 1 NC_005027.1 PMID: 10960085 best DB hits: BLAST: embl:CAB95035.1; (AJ272497) orf4 [Bacillus anthracis]; E=9e-12 pir:B83036; probable bacterioferritin PA4880 [imported] -; E=0.005 pir:G82332; bacterioferritin VC0365 [imported] - Vibrio cholerae; E=0.019 COG: PA4880; COG2193 Bacterioferritin (cytochrome b1); E=5e-04; hypothetical protein 910466 1794396 RB1753 Rhodopirellula baltica SH 1 hypothetical protein NP_864571.1 910005 D 243090 CDS NP_864572.1 32471579 1792077 complement(910614..911624) 1 NC_005027.1 hypothetical protein 911624 1792077 RB1756 Rhodopirellula baltica SH 1 hypothetical protein NP_864572.1 910614 R 243090 CDS NP_864573.1 32471580 1794019 complement(911615..912637) 1 NC_005027.1 best DB hits: PFAM: PF01351; Ribonuclease HII; E=0.11; hypothetical protein 912637 1794019 RB1758 Rhodopirellula baltica SH 1 hypothetical protein NP_864573.1 911615 R 243090 CDS NP_864574.1 32471581 1794192 complement(912640..913938) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:E72220; conserved hypothetical protein - Thermotoga maritima; E=3e-39 pir:A75484; conserved hypothetical protein - Deinococcus radiodurans; E=1e-37 embl:CAB94603.1; (AL359214) integral membrane protein; E=2e-35 COG: DR0719; COG2206 HD-GYP domain; E=1e-38 PFAM: PF01590; GAF domain; E=0.4 PF01966; HD domain; E=1.8e-15; phosphohydrolase 913938 1794192 RB1759 Rhodopirellula baltica SH 1 phosphohydrolase NP_864574.1 912640 R 243090 CDS NP_864575.1 32471582 1791905 complement(914023..915210) 1 NC_005027.1 best DB hits: BLAST: gb:AAF28931.1; AF161371_1 (AF161371) HSPC253 [Homo sapiens]; E=0.33; hypothetical protein 915210 1791905 RB1760 Rhodopirellula baltica SH 1 hypothetical protein NP_864575.1 914023 R 243090 CDS NP_864576.1 32471583 1796148 complement(915251..916207) 1 NC_005027.1 best DB hits: BLAST: gb:AAG59798.1; AF292097_4 (AF292097) SenB [Leptospira interrogans]; E=4e-06 gb:AAC23717.1; (AF031161) transcriptional activator [Pseudomonas; E=0.004 pir:C82379; response regulator VCA1086 [imported] - Vibrio cholerae; E=0.005 COG: VCA1086_2; COG2208 Serine phosphatase RsbU, regulator of sigma; E=5e-04 TP0995; COG0664 cAMP-binding domains - Catabolite gene activator and; E=0.002 PFAM: PF00072; Response regulator receiver doma; E=0.29 PF02518; Histidine kinase-, DNA gyrase B-; E=0.65; transcriptional regulator 916207 1796148 RB1764 Rhodopirellula baltica SH 1 transcriptional regulator NP_864576.1 915251 R 243090 CDS NP_864577.1 32471584 1794491 complement(916204..916317) 1 NC_005027.1 hypothetical protein 916317 1794491 RB1766 Rhodopirellula baltica SH 1 hypothetical protein NP_864577.1 916204 R 243090 CDS NP_864578.1 32471585 1791113 complement(916336..919059) 1 NC_005027.1 PMID: 2402463 best DB hits: BLAST: swissprot:P23700; OM6_CHLPN 60 KDA OUTER MEMBRANE PROTEIN; E=8e-23 gb:AAG60550.1; (AF240773) 60 kDa cysteine-rich membrane complex; E=3e-21 swissprot:P26758; OM6C_CHLTR 60 KDA OUTER MEMBRANE PROTEIN,; E=5e-21; hypothetical protein 919059 1791113 RB1767 Rhodopirellula baltica SH 1 hypothetical protein NP_864578.1 916336 R 243090 CDS NP_864579.1 32471586 1790117 complement(919273..919524) 1 NC_005027.1 hypothetical protein 919524 1790117 RB1771 Rhodopirellula baltica SH 1 hypothetical protein NP_864579.1 919273 R 243090 CDS NP_864580.1 32471587 1794831 complement(919524..919760) 1 NC_005027.1 hypothetical protein 919760 1794831 RB1773 Rhodopirellula baltica SH 1 hypothetical protein NP_864580.1 919524 R 243090 CDS NP_864581.1 32471588 1797054 complement(919757..919942) 1 NC_005027.1 hypothetical protein 919942 1797054 RB1775 Rhodopirellula baltica SH 1 hypothetical protein NP_864581.1 919757 R 243090 CDS NP_864582.1 32471589 1794284 919942..921096 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 921096 1794284 RB1776 Rhodopirellula baltica SH 1 signal peptide NP_864582.1 919942 D 243090 CDS NP_864583.1 32471590 1793323 complement(921036..921245) 1 NC_005027.1 hypothetical protein 921245 1793323 RB1778 Rhodopirellula baltica SH 1 hypothetical protein NP_864583.1 921036 R 243090 CDS NP_864584.1 32471591 1796349 921306..923501 1 NC_005027.1 PMID: 12024217 best DB hits: BLAST: ddbj:BAB05615.1; (AP001513) BH1896~unknown conserved protein; E=0.48; hypothetical protein 923501 1796349 RB1780 Rhodopirellula baltica SH 1 hypothetical protein NP_864584.1 921306 D 243090 CDS NP_864585.1 32471592 1791679 complement(923436..923951) 1 NC_005027.1 hypothetical protein 923951 1791679 RB1783 Rhodopirellula baltica SH 1 hypothetical protein NP_864585.1 923436 R 243090 CDS NP_864586.1 32471593 1796512 924070..925503 1 NC_005027.1 PMID: 8938413 best DB hits: BLAST: pir:T51527; UDP-glucose dehydrogenase-like protein - Arabidopsis; E=1e-155 ddbj:BAB02581.1; (AP001309) UDP-glucose dehydrogenase; E=1e-151 swissprot:Q96558; UGDH_SOYBN UDP-GLUCOSE 6-DEHYDROGENASE (UDP-GLC; E=1e-150 COG: aq_024; COG1004 Predicted UDP-glucose 6-dehydrogenase; E=2e-61 VC0918; COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; E=1e-27 PA3540; COG1004 Predicted UDP-glucose 6-dehydrogenase; E=8e-26 PFAM: PF00984; UDP-glucose/GDP-mannose dehydro; E=2.6e-180; UDP-glucose 6-dehydrogenase 925503 ugdH 1796512 ugdH Rhodopirellula baltica SH 1 UDP-glucose 6-dehydrogenase NP_864586.1 924070 D 243090 CDS NP_864587.1 32471594 1790420 925466..925621 1 NC_005027.1 hypothetical protein 925621 1790420 RB1785 Rhodopirellula baltica SH 1 hypothetical protein NP_864587.1 925466 D 243090 CDS NP_864588.1 32471595 1795593 complement(925686..925904) 1 NC_005027.1 hypothetical protein 925904 1795593 RB1787 Rhodopirellula baltica SH 1 hypothetical protein NP_864588.1 925686 R 243090 CDS NP_864589.1 32471596 1793367 925861..926592 1 NC_005027.1 PMID: 10484179 best DB hits: BLAST: ddbj:BAB05496.1; (AP001513) BH1777~unknown conserved protein; E=1e-04 ddbj:BAA14001.1; (D89626) adenylate cyclase [Anabaena sp.]; E=0.001 pir:B70700; hypothetical protein Rv0020c - Mycobacterium; E=0.003 COG: BH1777_1; COG1716 FHA-domain-containing proteins; E=5e-05 PFAM: PF00498; FHA domain; E=4.6e-18; hypothetical protein 926592 1793367 RB1789 Rhodopirellula baltica SH 1 hypothetical protein NP_864589.1 925861 D 243090 CDS NP_864590.1 32471597 1794434 926593..927168 1 NC_005027.1 PMID: 9274029 best DB hits: BLAST: pir:H70507; probable sigE protein - Mycobacterium tuberculosis; E=6e-14 gb:AAC45221.1; (U87307) extracytoplasmic function alternative; E=2e-13 gb:AAC45219.1; (U87308) extracytoplasmic function alternative; E=5e-13 COG: Rv1221; COG1595 DNA-directed RNA polymerase specialized sigma; E=6e-15 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=2.1e-09; RNA polymerase sigma factor sigW 927168 sigW 1794434 sigW Rhodopirellula baltica SH 1 RNA polymerase sigma factor sigW NP_864590.1 926593 D 243090 CDS NP_864591.1 32471598 1790416 927261..927827 1 NC_005027.1 hypothetical protein 927827 1790416 RB1792 Rhodopirellula baltica SH 1 hypothetical protein NP_864591.1 927261 D 243090 CDS NP_864592.1 32471599 1790670 927849..930413 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: pir:F72424; hypothetical protein - Thermotoga maritima (strain MSB8); E=0.098; hypothetical protein 930413 1790670 RB1793 Rhodopirellula baltica SH 1 hypothetical protein NP_864592.1 927849 D 243090 CDS NP_864593.1 32471600 1791348 930376..930534 1 NC_005027.1 hypothetical protein 930534 1791348 RB1796 Rhodopirellula baltica SH 1 hypothetical protein NP_864593.1 930376 D 243090 CDS NP_864594.1 32471601 1792927 930673..931767 1 NC_005027.1 PMID: 9403685 best DB hits: BLAST: pir:H70121; methanol dehydrogenase regulator (moxR) homolog - Lyme; E=4e-64 pir:D75008; methanol dehydrogenase regulatory protein (moxr-2); E=5e-63 pir:C83106; conserved hypothetical protein PA4322 [imported] -; E=3e-62 COG: BB0176; COG0714 MoxR-like ATPases; E=4e-65 PFAM: PF00004; ATPase associated with va; E=0.0036 PF01078; Magnesium chelatase, subunit Chl; E=1.6e-08; methanol dehydrogenase regulator (moxR)-like protein 931767 moxR 1792927 moxR Rhodopirellula baltica SH 1 methanol dehydrogenase regulator (moxR)-like protein NP_864594.1 930673 D 243090 CDS NP_864595.1 32471602 1795512 931757..932638 1 NC_005027.1 PMID: 9634230 best DB hits: BLAST: pir:G82493; conserved hypothetical protein VCA0174 [imported] -; E=3e-14 swissprot:P71761; YE80_MYCTU HYPOTHETICAL 34.3 KDA PROTEIN RV1480; E=8e-12 pir:G70121; conserved hypothetical protein BB0175 - Lyme disease; E=7e-11 COG: VCA0174; COG1721 Uncharacterized ACR; E=3e-15 PFAM: PF01882; Protein of unknown function DUF58; E=1.4e-24; hypothetical protein 932638 1795512 RB1800 Rhodopirellula baltica SH 1 hypothetical protein NP_864595.1 931757 D 243090 CDS NP_864596.1 32471603 1794905 932817..935360 1 NC_005027.1 hypothetical protein 935360 1794905 RB1802 Rhodopirellula baltica SH 1 hypothetical protein NP_864596.1 932817 D 243090 CDS NP_864597.1 32471604 1794014 935357..938212 1 NC_005027.1 best DB hits: PFAM: PF00092; von Willebrand factor type A domain; E=0.85; hypothetical protein 938212 1794014 RB1805 Rhodopirellula baltica SH 1 hypothetical protein NP_864597.1 935357 D 243090 CDS NP_864598.1 32471605 1794587 complement(938209..938361) 1 NC_005027.1 PMID: 8376963 best DB hits: BLAST: ddbj:BAA61806.1; (AB010300) replicase [garlic virus A]; E=0.77; replicase 938361 1794587 RB1809 Rhodopirellula baltica SH 1 replicase NP_864598.1 938209 R 243090 CDS NP_864599.1 32471606 1797066 complement(938487..939221) 1 NC_005027.1 hypothetical protein 939221 1797066 RB1814 Rhodopirellula baltica SH 1 hypothetical protein NP_864599.1 938487 R 243090 CDS NP_864600.1 32471607 1793467 939064..940068 1 NC_005027.1 PMID: 9679194 best DB hits: BLAST: pir:D75143; udp-glucose 4-epimerase (gale-1) PAB2145 - Pyrococcus; E=8e-42 pir:A71183; probable UDP-glucose 4-epimerase - Pyrococcus horikoshii; E=3e-40 pir:T51252; dTDPglucose 4,6-dehydratase (EC 4.2.1.46) [imported] -; E=4e-37 COG: PAB2145; COG0451 Nucleoside-diphosphate-sugar epimerases; E=8e-43 BH3364; COG1088 dTDP-D-glucose 4,6-dehydratase; E=2e-26 TM0630; COG0451 Nucleoside-diphosphate-sugar epimerases; E=5e-26 PFAM: PF00056; lactate/malate dehydrogenase, NAD b; E=0.011 PF01370; NAD dependent epimerase/dehydratase; E=7.1e-43; udp-glucose 4-epimerase 940068 galE 1793467 galE Rhodopirellula baltica SH 1 udp-glucose 4-epimerase NP_864600.1 939064 D 243090 CDS NP_864601.1 32471608 1797110 940065..942473 1 NC_005027.1 PMID: 8969512 best DB hits: BLAST: embl:CAA18685.1; (AL022602) serinethreonine protein; E=3e-23 pir:B70936; probable serinethreonine-specific protein kinase (EC; E=2e-22 swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=6e-22 COG: Rv2176; COG0515 Serine/threonine protein kinases; E=2e-23 PFAM: PF00069; Protein kinase domain; E=9.4e-41; serine/threonine-protein kinase 942473 pknB 1797110 pknB Rhodopirellula baltica SH 1 serine/threonine-protein kinase NP_864601.1 940065 D 243090 CDS NP_864602.1 32471609 1792036 complement(942503..942652) 1 NC_005027.1 hypothetical protein 942652 1792036 RB1825 Rhodopirellula baltica SH 1 hypothetical protein NP_864602.1 942503 R 243090 CDS NP_864603.1 32471610 1796720 942742..943644 1 NC_005027.1 hypothetical protein 943644 1796720 RB1827 Rhodopirellula baltica SH 1 hypothetical protein NP_864603.1 942742 D 243090 CDS NP_864604.1 32471611 1793207 943676..945511 1 NC_005027.1 signal peptide 945511 1793207 RB1828 Rhodopirellula baltica SH 1 signal peptide NP_864604.1 943676 D 243090 CDS NP_864605.1 32471612 1790027 complement(945498..945611) 1 NC_005027.1 best DB hits: PFAM: PF01726; LexA DNA binding domain; E=0.85; hypothetical protein 945611 1790027 RB1830 Rhodopirellula baltica SH 1 hypothetical protein NP_864605.1 945498 R 243090 CDS NP_864606.1 32471613 1796057 945722..947137 1 NC_005027.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A 947137 NqrA 1796057 NqrA Rhodopirellula baltica SH 1 Na(+)-translocating NADH-quinone reductase subunit A NP_864606.1 945722 D 243090 CDS NP_864607.1 32471614 1793058 947143..948402 1 NC_005027.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B 948402 nqrB 1793058 nqrB Rhodopirellula baltica SH 1 Na(+)-translocating NADH-quinone reductase subunit B NP_864607.1 947143 D 243090 CDS NP_864608.1 32471615 1791694 948389..949300 1 NC_005027.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C 949300 nqrC 1791694 nqrC Rhodopirellula baltica SH 1 Na(+)-translocating NADH-quinone reductase subunit C NP_864608.1 948389 D 243090 CDS NP_864609.1 32471616 1792050 949304..949930 1 NC_005027.1 Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit D 949930 nqrD 1792050 nqrD Rhodopirellula baltica SH 1 Na(+)-translocating NADH-quinone reductase subunit D NP_864609.1 949304 D 243090 CDS NP_864610.1 32471617 1793376 949934..950575 1 NC_005027.1 Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.; Na(+)-translocating NADH-quinone reductase subunit E 950575 nqrE 1793376 nqrE Rhodopirellula baltica SH 1 Na(+)-translocating NADH-quinone reductase subunit E NP_864610.1 949934 D 243090 CDS NP_864611.1 32471618 1795714 950711..951970 1 NC_005027.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F 951970 nqrF 1795714 nqrF Rhodopirellula baltica SH 1 Na(+)-translocating NADH-quinone reductase subunit F NP_864611.1 950711 D 243090 CDS NP_864612.1 32471619 1791825 951986..952102 1 NC_005027.1 hypothetical protein 952102 1791825 RB1838 Rhodopirellula baltica SH 1 hypothetical protein NP_864612.1 951986 D 243090 CDS NP_864613.1 32471620 1791547 952068..953690 1 NC_005027.1 PMID: 7542800 best DB hits: BLAST: pir:A82094; thiamin biosynthesis lipoprotein ApbE VC2289 [imported]; E=3e-61 swissprot:P44550; APBE_HAEIN THIAMINE BIOSYNTHESIS LIPOPROTEIN; E=8e-52 gb:AAK03418.1; (AE006171) ApbE [Pasteurella multocida]; E=4e-51 COG: VC2289; COG1477 Membrane-associated lipoprotein involved in thiamine; E=3e-62 NMB0563; COG1477 Membrane-associated lipoprotein involved in; E=2e-46 apbE; COG1477 Membrane-associated lipoprotein involved in thiamine; E=8e-45 PFAM: PF02424; ApbE family; E=6.5e-89; thiamine biosynthesis lipoprotein apbE 953690 apbE 1791547 apbE Rhodopirellula baltica SH 1 thiamine biosynthesis lipoprotein apbE NP_864613.1 952068 D 243090 CDS NP_864614.1 32471621 1795255 complement(953801..954643) 1 NC_005027.1 best DB hits: BLAST: gb:AAF19809.1; AF188287_1 (AF188287) MtaA [Stigmatella aurantiaca]; E=5e-17 pir:T00851; hypothetical protein T20F6.9 - Arabidopsis thaliana; E=2e-11 pir:E55210; hetI protein - Anabaena sp. (strain PCC 7120) -----; E=2e-11 COG: slr0495; COG2091 Phosphopantetheinyl transferase; E=3e-12 PFAM: PF01648; 4'-phosphopantetheinyl transferase s; E=7.5e-15; phosphopantetheinyltransferase 954643 hetI 1795255 hetI Rhodopirellula baltica SH 1 phosphopantetheinyltransferase NP_864614.1 953801 R 243090 CDS NP_864615.1 32471622 1793995 954715..955110 1 NC_005027.1 hypothetical protein 955110 1793995 RB1843 Rhodopirellula baltica SH 1 hypothetical protein NP_864615.1 954715 D 243090 CDS NP_864616.1 32471623 1789904 955212..955595 1 NC_005027.1 signal peptide 955595 1789904 RB1845 Rhodopirellula baltica SH 1 signal peptide NP_864616.1 955212 D 243090 CDS NP_864617.1 32471624 1793814 955620..956096 1 NC_005027.1 hypothetical protein 956096 1793814 RB1849 Rhodopirellula baltica SH 1 hypothetical protein NP_864617.1 955620 D 243090 CDS NP_864618.1 32471625 1794093 complement(956276..958387) 1 NC_005027.1 best DB hits: BLAST: pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=5e-22 embl:CAB94634.1; (AL359215) secreted glycosyl hydrolase.; E=1e-12 pir:T35029; hypothetical protein SC4C6.21c - Streptomyces coelicolor; E=8e-05; hypothetical protein 958387 1794093 RB1854 Rhodopirellula baltica SH 1 hypothetical protein NP_864618.1 956276 R 243090 CDS NP_864619.1 32471626 1793697 957840..959054 1 NC_005027.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 959054 1793697 RB1856 Rhodopirellula baltica SH 1 delta-aminolevulinic acid dehydratase NP_864619.1 957840 D 243090 CDS NP_864620.1 32471627 1795207 959080..959874 1 NC_005027.1 PMID: 12093901 best DB hits: BLAST: pir:H82553; 3-demethylubiquinone-9 3-methyltransferase XF2471; E=0.027 pir:T30158; hypothetical protein C37A2.6 - Caenorhabditis elegans; E=0.030 embl:CAA89660.1; (Z49629) ORF YJR129c [Saccharomyces cerevisiae]; E=0.76 COG: XF2471; COG2227; E=0.003; hypothetical protein 959874 1795207 RB1858 Rhodopirellula baltica SH 1 hypothetical protein NP_864620.1 959080 D 243090 CDS NP_864621.1 32471628 1793820 959932..960306 1 NC_005027.1 hypothetical protein 960306 1793820 RB1859 Rhodopirellula baltica SH 1 hypothetical protein NP_864621.1 959932 D 243090 CDS NP_864622.1 32471629 1794258 960361..960693 1 NC_005027.1 signal peptide 960693 1794258 RB1860 Rhodopirellula baltica SH 1 signal peptide NP_864622.1 960361 D 243090 CDS NP_864623.1 32471630 1793961 960630..961037 1 NC_005027.1 PMID: 9384377 best DB hits: BLAST: pir:G69999; transcriptional regulator GntR related protein ytrA -; E=8e-17 pir:D72336; transcriptional regulator, GntR family - Thermotoga; E=2e-14 pir:T36493; probable gntR-family transcriptional regulator -; E=9e-11 COG: BS_ytrA; COG1725 Predicted transcriptional regulators; E=8e-18 BS_yvoA; COG2188 Transcriptional regulators; E=8e-08 BH1164; COG1725 Predicted transcriptional regulators; E=8e-08 PFAM: PF00325; Bacterial regulatory proteins, crp f; E=0.49 PF00392; Bacterial regulatory proteins, gntR; E=9.4e-16; GntR family transcriptional regulator 961037 gntR 1793961 gntR Rhodopirellula baltica SH 1 GntR family transcriptional regulator NP_864623.1 960630 D 243090 CDS NP_864624.1 32471631 1793923 961124..962131 1 NC_005027.1 PMID: 10382966 best DB hits: BLAST: pir:F72742; probable transport ATP-binding protein APE0471 -; E=3e-34 pir:C72303; ABC transporter ATP-binding protein - Thermotoga; E=3e-34 gb:AAF81232.1; (AF263012) ABC transporter ATP binding protein; E=5e-34 COG: APE0471; COG1131 ABC-type multidrug transport system, ATPase; E=2e-35 PFAM: PF00448; SRP54-type protein, GTPase domain; E=0.16 PF00005; ABC transporter; E=1.4e-42; transport ATP-binding protein 962131 1793923 RB1866 Rhodopirellula baltica SH 1 transport ATP-binding protein NP_864624.1 961124 D 243090 CDS NP_864625.1 32471632 1793266 962128..964635 1 NC_005027.1 signal peptide 964635 1793266 RB1868 Rhodopirellula baltica SH 1 signal peptide NP_864625.1 962128 D 243090 CDS NP_864626.1 32471633 1790782 964632..966032 1 NC_005027.1 hypothetical protein 966032 1790782 RB1870 Rhodopirellula baltica SH 1 hypothetical protein NP_864626.1 964632 D 243090 CDS NP_864627.1 32471634 1795125 966053..966169 1 NC_005027.1 hypothetical protein 966169 1795125 RB1872 Rhodopirellula baltica SH 1 hypothetical protein NP_864627.1 966053 D 243090 CDS NP_864628.1 32471635 1794078 complement(966194..967177) 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: pir:F72425; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine; E=7e-12 ddbj:BAB03814.1; (AP001507); E=2e-09 swissprot:P29251; FAS_PNECA FOLIC ACID SYNTHESIS PROTEIN; E=3e-08 COG: TM0041; COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; E=7e-13 YNL256w_2; COG0801; E=9e-05 NMB0745; COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; E=1e-04 PFAM: PF01288; 7,8-dihydro-6-hydroxymethylpterin-py; E=2.4e-24; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 967177 1794078 RB1874 Rhodopirellula baltica SH 1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase NP_864628.1 966194 R 243090 CDS NP_864629.1 32471636 1797024 complement(967185..967322) 1 NC_005027.1 hypothetical protein 967322 1797024 RB1877 Rhodopirellula baltica SH 1 hypothetical protein NP_864629.1 967185 R 243090 CDS NP_864630.1 32471637 1794785 complement(967292..967732) 1 NC_005027.1 hypothetical protein 967732 1794785 RB1878 Rhodopirellula baltica SH 1 hypothetical protein NP_864630.1 967292 R 243090 CDS NP_864631.1 32471638 1791845 967725..967964 1 NC_005027.1 hypothetical protein 967964 1791845 RB1879 Rhodopirellula baltica SH 1 hypothetical protein NP_864631.1 967725 D 243090 CDS NP_864632.1 32471639 1794298 complement(967988..968215) 1 NC_005027.1 signal peptide 968215 1794298 RB1880 Rhodopirellula baltica SH 1 signal peptide NP_864632.1 967988 R 243090 CDS NP_864633.1 32471640 1791798 complement(968293..970143) 1 NC_005027.1 PMID: 10952301 best DB hits: BLAST: pir:C82076; general secretion pathway protein A VC2445 [imported] -; E=8e-18 pir:H82326; MSHA biogenesis protein MshM VC0403 [imported] - Vibrio; E=2e-16 swissprot:P45754; GSPA_AERHY GENERAL SECRETION PATHWAY PROTEIN A; E=2e-14 COG: VC2445_1; COG3267 General secretion pathway protein A; E=7e-19 PFAM: PF00719; Inorganic pyrophosphatase; E=0.73 PF00004; ATPase associated with; E=0.011; general secretion pathway protein A 970143 gspA 1791798 gspA Rhodopirellula baltica SH 1 general secretion pathway protein A NP_864633.1 968293 R 243090 CDS NP_864634.1 32471641 1792133 970284..971165 1 NC_005027.1 best DB hits: BLAST: pir:A71001; hypothetical protein PH1305 - Pyrococcus horikoshii; E=4e-13 pir:G75136; menaquinone biosynthesis methlytransferase related; E=9e-12 ddbj:BAB07674.1; (AP001520) BH3955~unknown conserved protein; E=2e-05 COG: PH1305; COG0500 SAM-dependent methyltransferases; E=4e-14; menaquinone biosynthesis methlytransferase related protein 971165 1792133 RB1885 Rhodopirellula baltica SH 1 menaquinone biosynthesis methlytransferase related protein NP_864634.1 970284 D 243090 CDS NP_864635.1 32471642 1791649 971181..972647 1 NC_005027.1 best DB hits: BLAST: pir:S27612; ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.-) -; E=2e-87 pir:S27619; ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.-) -; E=3e-86 pdb:1EYY; A Chain A, Crystal Structure Of The Nadp+ Dependent; E=8e-79 COG: PA2217; COG1012 NAD-dependent aldehyde dehydrogenases; E=9e-80 PFAM: PF00831; Ribosomal L29 protein; E=0.78 PF00171; Aldehyde dehydrogenase; E=2.9e-07; aldehyde dehydrogenase 972647 1791649 RB1887 Rhodopirellula baltica SH 1 aldehyde dehydrogenase NP_864635.1 971181 D 243090 CDS NP_864636.1 32471643 1791418 972883..976134 1 NC_005027.1 PMID: 8969512 best DB hits: BLAST: swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=3e-40 swissprot:Q11053; PKNH_MYCTU PROBABLE SERINETHREONINE-PROTEIN; E=2e-38 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=2e-38 COG: Rv1266c; COG0515 Serine/threonine protein kinases; E=1e-39 PFAM: PF00069; Protein kinase domain; E=1.1e-41 PF00400; WD domain, G-beta repeat; E=0.0026; serine/threonine-protein kinase 976134 1791418 RB1889 Rhodopirellula baltica SH 1 serine/threonine-protein kinase NP_864636.1 972883 D 243090 CDS NP_864637.1 32471644 1795980 complement(976187..976312) 1 NC_005027.1 hypothetical protein 976312 1795980 RB1890 Rhodopirellula baltica SH 1 hypothetical protein NP_864637.1 976187 R 243090 CDS NP_864638.1 32471645 1791786 976341..979562 1 NC_005027.1 PMID: 10484179 best DB hits: BLAST: ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=2e-37 embl:CAB94054.1; (AL358672) serinethreonine-protein; E=2e-34 pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=2e-33 COG: BH2504_1; COG0515 Serine/threonine protein kinases; E=2e-38 PFAM: PF00069; Protein kinase domain; E=5.1e-46 PF00400; WD domain, G-beta repeat; E=0.023; serine/threonine protein kinase 979562 1791786 RB1892 Rhodopirellula baltica SH 1 serine/threonine protein kinase NP_864638.1 976341 D 243090 CDS NP_864639.1 32471646 1796876 979639..982911 1 NC_005027.1 PMID: 9384377 best DB hits: BLAST: pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=9e-29 ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=1e-28 swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=6e-28 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=8e-30 PFAM: PF00069; Protein kinase domain; E=8.4e-42 PF00400; WD domain, G-beta repeat; E=0.3; serine/threonine-protein kinase 982911 1796876 RB1893 Rhodopirellula baltica SH 1 serine/threonine-protein kinase NP_864639.1 979639 D 243090 CDS NP_864640.1 32471647 1797031 complement(983055..985346) 1 NC_005027.1 PMID: 7665561 best DB hits: BLAST: swissprot:Q60560; SMB2_MESAU DNA-BINDING PROTEIN SMUBP-2; E=1e-100 gb:AAG28561.1; AF199411_1 (AF199411) antifreeze-enhancer binding; E=1e-99 gb:AAA70430.1; (L24544) DNA helicase [Homo sapiens]; E=1e-98 COG: aq_2057; COG1112 Superfamily I DNA and RNA helicases and helicase; E=1e-83 PFAM: PF00910; RNA helicase; E=0.63 PF00580; UvrD/REP helicase; E=0.54 PF00004; ATPase associated with; E=0.0017; DNA-binding protein SMUBP-2 985346 1797031 RB1895 Rhodopirellula baltica SH 1 DNA-binding protein SMUBP-2 NP_864640.1 983055 R 243090 CDS NP_864641.1 32471648 1793148 985295..985615 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:G83401; hypothetical protein PA1960 [imported] - Pseudomonas; E=9e-05 pir:B81972; probable integral membrane protein NMA0537 [imported]; E=0.014 pir:D81029; conserved hypothetical protein NMB1917 [imported] -; E=0.018 COG: PA1960_2; COG3326 Predicted membrane protein; E=4e-05; hypothetical protein 985615 1793148 RB1896 Rhodopirellula baltica SH 1 hypothetical protein NP_864641.1 985295 D 243090 CDS NP_864642.1 32471649 1794508 complement(985743..986441) 1 NC_005027.1 hypothetical protein 986441 1794508 RB1897 Rhodopirellula baltica SH 1 hypothetical protein NP_864642.1 985743 R 243090 CDS NP_864643.1 32471650 1794955 986429..987715 1 NC_005027.1 PMID: 9405209 best DB hits: BLAST: swissprot:P77980; AROB_SALTY 3-DEHYDROQUINATE SYNTHASE -----; E=4e-66 pir:B82053; 3-dehydroquinate synthase VC2628 [imported] - Vibrio; E=5e-65 ddbj:BAB10417.1; (AB011474) 3-dehydroquinate synthase-like; E=6e-63 COG: VC2628; COG0337 3-dehydroquinate synthetase; E=5e-66 PFAM: PF01761; 3-dehydroquinate synthase; E=4e-146; 3-dehydroquinate synthase 987715 aroB 1794955 aroB Rhodopirellula baltica SH 1 3-dehydroquinate synthase NP_864643.1 986429 D 243090 CDS NP_864644.1 32471651 1795853 987820..988374 1 NC_005027.1 PMID: 9919671 best DB hits: BLAST: embl:CAA09920.1; (AJ012097) NusG-like protein [Myxococcus; E=3e-05 pir:G82255; probable transcription activator RfaH VC0990 [imported]; E=4e-04 embl:CAA10615.1; (AJ132239) transcriptional activator [Erwinia; E=0.019 COG: VC0990; COG0250 Transcription antiterminator; E=3e-05; NusG-like protein- transcription activator 988374 1795853 RB1900 Rhodopirellula baltica SH 1 NusG-like protein- transcription activator NP_864644.1 987820 D 243090 CDS NP_864645.1 32471652 1791031 988429..988833 1 NC_005027.1 hypothetical protein 988833 1791031 RB1901 Rhodopirellula baltica SH 1 hypothetical protein NP_864645.1 988429 D 243090 CDS NP_864646.1 32471653 1793860 988719..990776 1 NC_005027.1 PMID: 2543955 best DB hits: BLAST: pir:S04349; nitrate reductase (NADH) (EC 1.6.6.1) - Escherichia coli; E=5e-75 swissprot:P08201; NIRB_ECOLI NITRITE REDUCTASE [NAD(P)H] LARGE; E=3e-69 gb:AAG58473.1; AE005559_9 (AE005559) nitrite reductase (NAD(P)H); E=3e-69 COG: nirB; COG1251 NAD(P)H-nitrite reductase; E=3e-70 PH1509; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; E=3e-38 PFAM: PF00070; Pyridine nucleotide-disulphide oxid; E=1.5e-65; nitrite reductase [NAD(P)H] large subunit 990776 nirB 1793860 nirB Rhodopirellula baltica SH 1 nitrite reductase [NAD(P)H] large subunit NP_864646.1 988719 D 243090 CDS NP_864647.1 32471654 1794129 990721..992163 1 NC_005027.1 PMID: 11248100 best DB hits: BLAST: gb:AAK02107.1; (AE006035) NrfA [Pasteurella multocida]; E=0.068 PFAM: PF02335; Cytochrome c552; E=0.21; NrfA- nitrite reduction protein 992163 1794129 RB1903 Rhodopirellula baltica SH 1 NrfA- nitrite reduction protein NP_864647.1 990721 D 243090 CDS NP_864648.1 32471655 1793523 992277..992900 1 NC_005027.1 signal peptide 992900 1793523 RB1908 Rhodopirellula baltica SH 1 signal peptide NP_864648.1 992277 D 243090 CDS NP_864649.1 32471656 1795374 992934..993434 1 NC_005027.1 PMID: 3067078 best DB hits: BLAST: embl:CAC11135.1; (AJ245945) neuroglobin [Mus musculus]; E=1e-09 gb:AAG59898.1; (AF334379) neuroglobin [Rattus norvegicus]; E=1e-09 ddbj:BAA83959.1; (AB024563) HMP [Bacillus halodurans] -----; E=1e-08 COG: BH1058_1; COG1017 Hemoglobin-like flavoprotein; E=1e-09 PFAM: PF00042; Globin; E=3.9e-20; hemoglobin 993434 1795374 RB1909 Rhodopirellula baltica SH 1 hemoglobin NP_864649.1 992934 D 243090 CDS NP_864650.1 32471657 1792221 complement(993393..993764) 1 NC_005027.1 hypothetical protein 993764 1792221 RB1910 Rhodopirellula baltica SH 1 hypothetical protein NP_864650.1 993393 R 243090 CDS NP_864651.1 32471658 1795890 complement(993780..995861) 1 NC_005027.1 signal peptide 995861 1795890 RB1912 Rhodopirellula baltica SH 1 signal peptide NP_864651.1 993780 R 243090 CDS NP_864652.1 32471659 1795477 complement(995938..998040) 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: swissprot:Q00808; HET1_PODAN VEGETATIBLE INCOMPATIBILITY PROTEIN; E=8e-17 swissprot:P49695; PKWA_THECU SERINETHREONINE-PROTEIN; E=9e-14 swissprot:P78706; RCO1_NEUCR TRANSCRIPTIONAL REPRESSOR RCO-1; E=6e-13 COG: sll1491; COG2319 WD40 repeat protein; E=9e-13 PFAM: PF00400; WD domain, G-beta repeat; E=0.0052; hypothetical protein 998040 1795477 RB1917 Rhodopirellula baltica SH 1 hypothetical protein NP_864652.1 995938 R 243090 CDS NP_864653.1 32471660 1795451 complement(998226..998522) 1 NC_005027.1 hypothetical protein 998522 1795451 RB1920 Rhodopirellula baltica SH 1 hypothetical protein NP_864653.1 998226 R 243090 CDS NP_864654.1 32471661 1794673 complement(998609..998917) 1 NC_005027.1 hypothetical protein 998917 1794673 RB1922 Rhodopirellula baltica SH 1 hypothetical protein NP_864654.1 998609 R 243090 CDS NP_864655.1 32471662 1796123 998904..999107 1 NC_005027.1 hypothetical protein 999107 1796123 RB1923 Rhodopirellula baltica SH 1 hypothetical protein NP_864655.1 998904 D 243090 CDS NP_864656.1 32471663 1790213 999064..1012956 1 NC_005027.1 PMID: 99098700 best DB hits: BLAST: pir:T28679; fibrinogen-binding protein homolog - Staphylococcus aureus; E=6e-11 gb:AAF72509.1; AF245041_1 (AF245041) cell-surface adhesin; E=2e-09 gb:AAF76874.1; (AF246145) unknown [uncultured soil microbe; E=5e-07 COG: sll0656_1; COG3204 Uncharacterized BCR; E=9e-05 PFAM: PF00028; Cadherin domain; E=0.88 PF00404; Dockerin type I repeat; E=0.32; fibrinogen-binding protein 1012956 1790213 RB1924 Rhodopirellula baltica SH 1 fibrinogen-binding protein NP_864656.1 999064 D 243090 CDS NP_864657.1 32471664 1797036 1012991..1013539 1 NC_005027.1 signal peptide 1013539 1797036 RB1930 Rhodopirellula baltica SH 1 signal peptide NP_864657.1 1012991 D 243090 CDS NP_864658.1 32471665 1794447 complement(1013625..1013831) 1 NC_005027.1 hypothetical protein 1013831 1794447 RB1931 Rhodopirellula baltica SH 1 hypothetical protein NP_864658.1 1013625 R 243090 CDS NP_864659.1 32471666 1796847 1013853..1014026 1 NC_005027.1 hypothetical protein 1014026 1796847 RB1932 Rhodopirellula baltica SH 1 hypothetical protein NP_864659.1 1013853 D 243090 CDS NP_864660.1 32471667 1792793 1014051..1019531 1 NC_005027.1 PMID: 1712356 best DB hits: BLAST: pir:A47026; alkaline phosphatase, 145K - Synechococcus sp. (strain PCC; E=0.0 pir:S74916; alkaline phosphatase - Synechocystis sp. (strain PCC 6803); E=1e-108 pir:A69809; probable multifunctional phosphoesterase (EC 3.1.-.-) yfkN; E=5e-22 COG: sll0654_2; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase; E=8e-99 DRA0018; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and; E=1e-22 BS_yfkN_2; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase; E=4e-22 PFAM: PF01009; 5'-nucleotidase, catalytic do; E=1e-32 PF02872; 5'-nucleotidase, C-terminal d; E=3.9e-38 PF00404; Dockerin type I repeat; E=0.0061; alkaline phosphatase 1019531 1792793 RB1934 Rhodopirellula baltica SH 1 alkaline phosphatase NP_864660.1 1014051 D 243090 CDS NP_864661.1 32471668 1791025 1019601..1019741 1 NC_005027.1 hypothetical protein 1019741 1791025 RB1935 Rhodopirellula baltica SH 1 hypothetical protein NP_864661.1 1019601 D 243090 CDS NP_864662.1 32471669 1796326 1019641..1022700 1 NC_005027.1 PMID: 7632918 best DB hits: BLAST: swissprot:P80028; THIH_CHLRE THIOREDOXIN H-TYPE (TRX-H); E=0.078 pdb:1TOF; Thioredoxin H (Oxidized Form), Nmr, 23 Structures; E=0.078 gb:AAF19044.1; (L08896) thioredoxin [Mycoplasma gallisepticum]; E=0.22 PFAM: PF01835; Alpha-2-macroglobulin family N-termi; E=0.4 PF00085; Thioredoxin; E=0.18; thioredoxin 1022700 1796326 RB1936 Rhodopirellula baltica SH 1 thioredoxin NP_864662.1 1019641 D 243090 CDS NP_864663.1 32471670 1794980 1022707..1022820 1 NC_005027.1 hypothetical protein 1022820 1794980 RB1937 Rhodopirellula baltica SH 1 hypothetical protein NP_864663.1 1022707 D 243090 CDS NP_864664.1 32471671 1796622 complement(1022855..1024363) 1 NC_005027.1 PMID: 9353932 best DB hits: BLAST: ddbj:BAB05939.1; (AP001514) dehydrogenase [Bacillus halodurans]; E=2e-07 swissprot:P40332; YISS_BACSU HYPOTHETICAL 37.5 KD PROTEIN IN; E=6e-06 pir:B72359; lipopolysaccharide biosynthesis protein BplA -; E=1e-05 COG: BH2220; COG0673 Predicted dehydrogenases and related proteins; E=2e-08 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=5e-14; oxidoreductase 1024363 1796622 RB1939 Rhodopirellula baltica SH 1 oxidoreductase NP_864664.1 1022855 R 243090 CDS NP_864665.1 32471672 1789947 1024508..1025485 1 NC_005027.1 signal peptide 1025485 1789947 RB1942 Rhodopirellula baltica SH 1 signal peptide NP_864665.1 1024508 D 243090 CDS NP_864666.1 32471673 1795108 complement(1025731..1026966) 1 NC_005027.1 signal peptide 1026966 1795108 RB1946 Rhodopirellula baltica SH 1 signal peptide NP_864666.1 1025731 R 243090 CDS NP_864667.1 32471674 1794331 complement(1026986..1028932) 1 NC_005027.1 signal peptide 1028932 1794331 RB1950 Rhodopirellula baltica SH 1 signal peptide NP_864667.1 1026986 R 243090 CDS NP_864668.1 32471675 1791147 complement(1028985..1031483) 1 NC_005027.1 best DB hits: BLAST: pir:T30283; polyketide synthase - Streptomyces sp. (strain MA6548); E=0.11 gb:AAF86396.1; AF235504_17 (AF235504) FkbA [Streptomyces; E=0.11 pir:T30228; polyketide synthase - Streptomyces hygroscopicus -----; E=0.12; polyketide synthase 1031483 1791147 RB1954 Rhodopirellula baltica SH 1 polyketide synthase NP_864668.1 1028985 R 243090 CDS NP_864669.1 32471676 1794649 complement(1031656..1033554) 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB59500.1; (AL132648) hypothetical protein SCI41.30c; E=5e-16 pir:C70512; hypothetical protein Rv2112c - Mycobacterium; E=1e-13 gb:AAC45734.1; (U26422) ORF6(2); similar to ORF6(1) of; E=3e-13; hypothetical protein 1033554 1794649 RB1958 Rhodopirellula baltica SH 1 hypothetical protein NP_864669.1 1031656 R 243090 CDS NP_864670.1 32471677 1795587 1033791..1034144 1 NC_005027.1 hypothetical protein 1034144 1795587 RB1961 Rhodopirellula baltica SH 1 hypothetical protein NP_864670.1 1033791 D 243090 CDS NP_864671.1 32471678 1797000 1034475..1035977 1 NC_005027.1 PMID: 9835038 best DB hits: BLAST: swissprot:O50634; RPOA_BACHD DNA-DIRECTED RNA POLYMERASE ALPHA; E=2e-09 swissprot:Q9Z3E7; RPOA_XANCP DNA-DIRECTED RNA POLYMERASE ALPHA; E=4e-09 gb:AAD00325.2; (U79735) RNA polymerase ALPHA subunit [Xanthomonas; E=4e-09 COG: BH0162; COG0202 DNA-directed RNA polymerase alpha subunit/40 kD; E=2e-10 PFAM: PF00515; TPR Domain; E=0.87 PF01000; Bacterial RNA polymerase, alpha; E=6.5e-12; DNA-directed RNA polymerase alpha chain 1035977 rpoA 1797000 rpoA Rhodopirellula baltica SH 1 DNA-directed RNA polymerase alpha chain NP_864671.1 1034475 D 243090 CDS NP_864672.1 32471679 1791072 1035983..1037101 1 NC_005027.1 PMID: 7665516 best DB hits: BLAST: pir:T46898; queuine tRNA-ribosyltransferase (EC 2.4.2.29); E=2e-98 gb:AAA27705.1; (L33777) tRNA guanine transglycosylase [Zymomonas; E=2e-98 swissprot:P28720; TGT_ZYMMO QUEUINE TRNA-RIBOSYLTRANSFERASE; E=2e-98 COG: PA3823; COG0343 Queuine/archaeosine tRNA-ribosyltransferase; E=6e-99 PFAM: PF01702; Queuine tRNA-ribosyltransferase; E=1.2e-118; queuine tRNA-ribosyltransferase 1037101 tgt 1791072 tgt Rhodopirellula baltica SH 1 queuine tRNA-ribosyltransferase NP_864672.1 1035983 D 243090 CDS NP_864673.1 32471680 1794101 complement(1037222..1038496) 1 NC_005027.1 PMID: 9384377 best DB hits: BLAST: pir:A70029; hypothetical protein yvaX - Bacillus subtilis -----; E=4e-04 swissprot:Q90805; CNG1_CHICK CYCLIC NUCLEOTIDE GATED CHANNEL, CONE; E=0.52; hypothetical protein 1038496 1794101 RB1972 Rhodopirellula baltica SH 1 hypothetical protein NP_864673.1 1037222 R 243090 CDS NP_864674.1 32471681 1795941 complement(1038493..1039470) 1 NC_005027.1 hypothetical protein 1039470 1795941 RB1974 Rhodopirellula baltica SH 1 hypothetical protein NP_864674.1 1038493 R 243090 CDS NP_864675.1 32471682 1795523 1039488..1040645 1 NC_005027.1 PMID: 9679194 best DB hits: BLAST: gb:AAF55578.1; (AE003723) CG7698 gene product [Drosophila; E=3e-09 pir:E71119; hypothetical protein PH0724 - Pyrococcus horikoshii; E=1e-05 gb:AAF19420.1; AF203969_1 (AF203969) cleavage and polyadenylation; E=3e-05 COG: PH0724; COG1236 Predicted exonuclease of the beta-lactamase fold; E=1e-06 PH1404; COG1782 Predicted metal-dependent RNase, consists of a; E=0.001 VC0264; COG1236 Predicted exonuclease of the beta-lactamase fold; E=0.002 PFAM: PF00753; Metallo-beta-lactamase superfamil; E=0.23; cleavage and polyadenylation specifity factor protein 1040645 1795523 RB1977 Rhodopirellula baltica SH 1 cleavage and polyadenylation specifity factor protein NP_864675.1 1039488 D 243090 CDS NP_864676.1 32471683 1791333 1040854..1043910 1 NC_005027.1 best DB hits: PFAM: PF00242; DNA polymerase (viral) N-term; E=0.23; signal peptide 1043910 1791333 RB1979 Rhodopirellula baltica SH 1 signal peptide NP_864676.1 1040854 D 243090 CDS NP_864677.1 32471684 1795737 complement(1043987..1044448) 1 NC_005027.1 hypothetical protein 1044448 1795737 RB1984 Rhodopirellula baltica SH 1 hypothetical protein NP_864677.1 1043987 R 243090 CDS NP_864678.1 32471685 1795306 1044541..1048065 1 NC_005027.1 PMID: 2671663 best DB hits: BLAST: swissprot:P13650; DHGB_ACICA GLUCOSE DEHYDROGENASE-B; E=0.12 pdb:1CRU; B Chain B, Soluble Quinoprotein Glucose Dehydrogenase; E=0.12 pir:C69050; phycocyanin alpha phycocyanobilin lyase CpcE -; E=0.19; glucose dehydrogenase-B [pyrroloquinoline-quinone] [precursor] 1048065 gdhP 1795306 gdhP Rhodopirellula baltica SH 1 glucose dehydrogenase-B [pyrroloquinoline-quinone] [precursor] NP_864678.1 1044541 D 243090 CDS NP_864679.1 32471686 1795828 1048157..1048672 1 NC_005027.1 signal peptide 1048672 1795828 RB1991 Rhodopirellula baltica SH 1 signal peptide NP_864679.1 1048157 D 243090 CDS NP_864680.1 32471687 1796514 1048704..1049129 1 NC_005027.1 PMID: 7610040 best DB hits: BLAST: swissprot:P16681; PHNB_ECOLI PHNB PROTEIN ----- pir: C35718; E=7e-13 gb:AAG59306.1; AE005643_13 (AE005643) phnB gene product; E=8e-13 pir:B83475; hypothetical protein PA1353 [imported] - Pseudomonas; E=4e-12 COG: phnB; COG2764 Uncharacterized BCR; E=7e-14; PhnB protein 1049129 1796514 RB1992 Rhodopirellula baltica SH 1 PhnB protein NP_864680.1 1048704 D 243090 CDS NP_864681.1 32471688 1790791 complement(1049204..1050487) 1 NC_005027.1 PMID: 10192388 best DB hits: BLAST: pir:E72028; poly A polymerase - Chlamydophila pneumoniae (strains; E=9e-41 pir:B81744; poly(A) polymerase TC0077 [imported] -; E=3e-40 pir:A71481; probable poly A polymerase - Chlamydia trachomatis; E=5e-40 COG: CPn0845; COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; E=9e-42 PFAM: PF01743; Poly A polymerase; E=2.6e-50; poly A polymerase 1050487 papS 1790791 papS Rhodopirellula baltica SH 1 poly A polymerase NP_864681.1 1049204 R 243090 CDS NP_864682.1 32471689 1792429 1050487..1051065 1 NC_005027.1 hypothetical protein 1051065 1792429 RB1994 Rhodopirellula baltica SH 1 hypothetical protein NP_864682.1 1050487 D 243090 CDS NP_864683.1 32471690 1796153 complement(1050518..1051123) 1 NC_005027.1 hypothetical protein 1051123 1796153 RB1995 Rhodopirellula baltica SH 1 hypothetical protein NP_864683.1 1050518 R 243090 CDS NP_864684.1 32471691 1792179 1051251..1053923 1 NC_005027.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 1053923 ppdK 1792179 ppdK Rhodopirellula baltica SH 1 pyruvate phosphate dikinase NP_864684.1 1051251 D 243090 CDS NP_864685.1 32471692 1792235 1053955..1054068 1 NC_005027.1 hypothetical protein 1054068 1792235 RB1999 Rhodopirellula baltica SH 1 hypothetical protein NP_864685.1 1053955 D 243090 CDS NP_864686.1 32471693 1793881 1054072..1054248 1 NC_005027.1 hypothetical protein 1054248 1793881 RB2000 Rhodopirellula baltica SH 1 hypothetical protein NP_864686.1 1054072 D 243090 CDS NP_864687.1 32471694 1794503 1054294..1055706 1 NC_005027.1 PMID: 11371519 best DB hits: BLAST: pir:G69146; capsular polysaccharide biosynthesis protein -; E=2e-10 pir:E72354; probable hexosyltransferase (EC 2.4.1.-) TM0622 -; E=9e-10 pir:T44601; probable glycosyltransferase [imported] - Rhizobium; E=5e-08 COG: MTH362; COG0438 Predicted glycosyltransferases; E=2e-11 PFAM: PF00534; Glycosyl transferases group 1; E=1.3e-18; glycosyltransferase 1055706 1794503 RB2001 Rhodopirellula baltica SH 1 glycosyltransferase NP_864687.1 1054294 D 243090 CDS NP_864688.1 32471695 1793260 1055737..1055970 1 NC_005027.1 hypothetical protein 1055970 1793260 RB2002 Rhodopirellula baltica SH 1 hypothetical protein NP_864688.1 1055737 D 243090 CDS NP_864689.1 32471696 1796180 1056010..1056846 1 NC_005027.1 signal peptide 1056846 1796180 RB2003 Rhodopirellula baltica SH 1 signal peptide NP_864689.1 1056010 D 243090 CDS NP_864690.1 32471697 1789919 1056824..1057030 1 NC_005027.1 hypothetical protein 1057030 1789919 RB2006 Rhodopirellula baltica SH 1 hypothetical protein NP_864690.1 1056824 D 243090 CDS NP_864691.1 32471698 1796001 complement(1056967..1057197) 1 NC_005027.1 hypothetical protein 1057197 1796001 RB2007 Rhodopirellula baltica SH 1 hypothetical protein NP_864691.1 1056967 R 243090 CDS NP_864692.1 32471699 1791809 complement(1057302..1058660) 1 NC_005027.1 PMID: 9389475 best DB hits: BLAST: gb:AAB89763.1; (AE001000) signal-transducing histidine kinase; E=4e-29 embl:CAB62662.1; (AL133422) two-component sensor; E=9e-24 swissprot:Q9R6X3; PHYB_ANASP CYANOBACTERIAL PHYTOCHROME B -----; E=9e-22 COG: DR2419_2; COG0642 Sensory transduction histidine kinases; E=3e-21 PFAM: PF00785; PAC motif; E=7.7e-10 PF00512; His Kinase A (phosphoacceptor) doma; E=7.1e-09 PF02518; Histidine kinase-, DNA gyrase B-, p; E=3.1e-25; signal-transducing histidine kinase 1058660 1791809 RB2008 Rhodopirellula baltica SH 1 signal-transducing histidine kinase NP_864692.1 1057302 R 243090 CDS NP_864693.1 32471700 1790175 1058648..1059391 1 NC_005027.1 hypothetical protein 1059391 1790175 RB2010 Rhodopirellula baltica SH 1 hypothetical protein NP_864693.1 1058648 D 243090 CDS NP_864694.1 32471701 1793790 1059411..1059692 1 NC_005027.1 hypothetical protein 1059692 1793790 RB2011 Rhodopirellula baltica SH 1 hypothetical protein NP_864694.1 1059411 D 243090 CDS NP_864695.1 32471702 1794726 complement(1059627..1061186) 1 NC_005027.1 signal peptide 1061186 1794726 RB2012 Rhodopirellula baltica SH 1 signal peptide NP_864695.1 1059627 R 243090 CDS NP_864696.1 32471703 1790660 1061404..1063605 1 NC_005027.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA 1063605 secA 1790660 secA Rhodopirellula baltica SH 1 preprotein translocase subunit SecA NP_864696.1 1061404 D 243090 CDS NP_864697.1 32471704 1791402 1063625..1063867 1 NC_005027.1 hypothetical protein 1063867 1791402 RB2015 Rhodopirellula baltica SH 1 hypothetical protein NP_864697.1 1063625 D 243090 CDS NP_864698.1 32471705 1794303 1063806..1065398 1 NC_005027.1 hypothetical protein 1065398 1794303 RB2016 Rhodopirellula baltica SH 1 hypothetical protein NP_864698.1 1063806 D 243090 CDS NP_864699.1 32471706 1791792 complement(1065345..1065605) 1 NC_005027.1 hypothetical protein 1065605 1791792 RB2018 Rhodopirellula baltica SH 1 hypothetical protein NP_864699.1 1065345 R 243090 CDS NP_864700.1 32471707 1791414 1065619..1065798 1 NC_005027.1 hypothetical protein 1065798 1791414 RB2019 Rhodopirellula baltica SH 1 hypothetical protein NP_864700.1 1065619 D 243090 CDS NP_864701.1 32471708 1791967 1065874..1065996 1 NC_005027.1 hypothetical protein 1065996 1791967 RB2020 Rhodopirellula baltica SH 1 hypothetical protein NP_864701.1 1065874 D 243090 CDS NP_864702.1 32471709 1795480 1066001..1066123 1 NC_005027.1 hypothetical protein 1066123 1795480 RB2021 Rhodopirellula baltica SH 1 hypothetical protein NP_864702.1 1066001 D 243090 CDS NP_864703.1 32471710 1797108 complement(1066199..1066984) 1 NC_005027.1 PMID: 10484179 best DB hits: BLAST: ddbj:BAB06095.1; (AP001515) BH2376~unknown conserved protein; E=4e-48 pir:G69884; conserved hypothetical protein ymdB - Bacillus subtilis; E=3e-46 pir:D75415; conserved hypothetical protein - Deinococcus radiodurans; E=4e-38 COG: BH2376; COG1692 Uncharacterized BCR; E=4e-49 PFAM: PF02640; Uncharacterized BCR, YmdB family COG; E=1.9e-75; hypothetical protein 1066984 1797108 RB2022 Rhodopirellula baltica SH 1 hypothetical protein NP_864703.1 1066199 R 243090 CDS NP_864704.1 32471711 1791979 complement(1067110..1068792) 1 NC_005027.1 PMID: 9823893 best DB hits: BLAST: gb:AAD29257.1; AF107093_2 (AF107093) ribosomal protein S1; E=3e-48 gb:AAF64246.1; (AF045481) 30S ribosomal protein S1; E=2e-45 swissprot:Q9ZD28; RS1_RICPR 30S RIBOSOMAL PROTEIN S1 -----; E=3e-45 COG: RP521; COG0539 Ribosomal protein S1; E=3e-46 PFAM: PF00575; S1 RNA binding domain; E=3.6e-06; 30S ribosomal protein S1 1068792 rpsA 1791979 rpsA Rhodopirellula baltica SH 1 30S ribosomal protein S1 NP_864704.1 1067110 R 243090 CDS NP_864705.1 32471712 1790494 complement(1068855..1069517) 1 NC_005027.1 signal peptide 1069517 1790494 RB2027 Rhodopirellula baltica SH 1 signal peptide NP_864705.1 1068855 R 243090 CDS NP_864706.1 32471713 1796209 1069601..1069822 1 NC_005027.1 best DB hits: BLAST: gb:AAG13524.1; AC068924_29 (AC068924) non-LTR retroelement; E=0.55; hypothetical protein 1069822 1796209 RB2031 Rhodopirellula baltica SH 1 hypothetical protein NP_864706.1 1069601 D 243090 CDS NP_864707.1 32471714 1791774 complement(1069776..1070867) 1 NC_005027.1 PMID: 10937442 best DB hits: BLAST: embl:CAA05166.1; (AJ002065) delta-9 desaturase [Spirulina; E=2e-38 gb:AAD00699.1; (U90417) delta 9 acyl-lipid fatty acid desaturase; E=3e-37 gb:AAB61353.1; (U36390) delta-9 desaturase [Synechococcus sp. PCC; E=3e-37 COG: sll0541; COG1398 Fatty-acid desaturase; E=4e-38 PFAM: PF01069; Fatty acid desaturase; E=4e-28; delta 9 acyl-lipid fatty acid desaturase 1070867 1791774 RB2032 Rhodopirellula baltica SH 1 delta 9 acyl-lipid fatty acid desaturase NP_864707.1 1069776 R 243090 CDS NP_864708.1 32471715 1797058 1071018..1071485 1 NC_005027.1 hypothetical protein 1071485 1797058 RB2034 Rhodopirellula baltica SH 1 hypothetical protein NP_864708.1 1071018 D 243090 CDS NP_864709.1 32471716 1795776 complement(1071604..1076265) 1 NC_005027.1 best DB hits: BLAST: pir:T26963; hypothetical protein ZK1151.2a - Caenorhabditis elegans; E=0.089 pir:T26964; hypothetical protein ZK1151.2b - Caenorhabditis elegans; E=0.089 ddbj:BAA96036.1; (AB040945) KIAA1512 protein [Homo sapiens]; E=0.50 PFAM: PF00817; impB/mucB/samB family; E=0.24; hypothetical protein 1076265 1795776 RB2038 Rhodopirellula baltica SH 1 hypothetical protein NP_864709.1 1071604 R 243090 CDS NP_864710.1 32471717 1797106 1076233..1076418 1 NC_005027.1 hypothetical protein 1076418 1797106 RB2043 Rhodopirellula baltica SH 1 hypothetical protein NP_864710.1 1076233 D 243090 CDS NP_864711.1 32471718 1797030 1076379..1076585 1 NC_005027.1 hypothetical protein 1076585 1797030 RB2044 Rhodopirellula baltica SH 1 hypothetical protein NP_864711.1 1076379 D 243090 CDS NP_864712.1 32471719 1792906 complement(1076544..1077461) 1 NC_005027.1 PMID: 11259647 best DB hits: BLAST: embl:CAB51627.1; (AJ245398) hypothetical protein [Sinorhizobium; E=0.28 swissprot:P29908; YNQ2_PARDE HYPOTHETICAL 22.9 KD PROTEIN IN NQO2; E=0.30 gb:AAG02153.1; AF212041_9 (AF212041) NADH dehydogenase [Zymomonas; E=0.73; iron-sulfur cluster transporter 1077461 1792906 RB2045 Rhodopirellula baltica SH 1 iron-sulfur cluster transporter NP_864712.1 1076544 R 243090 CDS NP_864713.1 32471720 1791087 1077543..1078985 1 NC_005027.1 hypothetical protein 1078985 1791087 RB2046 Rhodopirellula baltica SH 1 hypothetical protein NP_864713.1 1077543 D 243090 CDS NP_864714.1 32471721 1796097 1079040..1079180 1 NC_005027.1 hypothetical protein 1079180 1796097 RB2050 Rhodopirellula baltica SH 1 hypothetical protein NP_864714.1 1079040 D 243090 CDS NP_864715.1 32471722 1794920 1079177..1080280 1 NC_005027.1 PMID: 10952301 best DB hits: BLAST: pir:D82333; conserved hypothetical protein VC0370 [imported] -; E=0.18 gb:AAC62109.1; (AF092449) mucin-like protein [Heterodera; E=0.43; mucin-like protein 1080280 1794920 RB2051 Rhodopirellula baltica SH 1 mucin-like protein NP_864715.1 1079177 D 243090 CDS NP_864716.1 32471723 1792065 complement(1080412..1080579) 1 NC_005027.1 hypothetical protein 1080579 1792065 RB2052 Rhodopirellula baltica SH 1 hypothetical protein NP_864716.1 1080412 R 243090 CDS NP_864717.1 32471724 1797040 1080562..1081023 1 NC_005027.1 hypothetical protein 1081023 1797040 RB2053 Rhodopirellula baltica SH 1 hypothetical protein NP_864717.1 1080562 D 243090 CDS NP_864718.1 32471725 1794273 1080965..1082173 1 NC_005027.1 PMID: 10952301 best DB hits: BLAST: pir:E82493; conserved hypothetical protein VCA0172 [imported] -; E=0.002 gb:AAD30858.1; AF116251_1 (AF116251) BatA [Bacteroides fragilis]; E=0.012 pir:T21759; hypothetical protein F35C5.9 - Caenorhabditis elegans; E=0.012 COG: VCA0172; COG3035 Uncharacterized BCR; E=2e-04 PFAM: PF00092; von Willebrand factor type A domain; E=0.00013; hypothetical protein 1082173 1794273 RB2055 Rhodopirellula baltica SH 1 hypothetical protein NP_864718.1 1080965 D 243090 CDS NP_864719.1 32471726 1794596 1082219..1082815 1 NC_005027.1 hypothetical protein 1082815 1794596 RB2056 Rhodopirellula baltica SH 1 hypothetical protein NP_864719.1 1082219 D 243090 CDS NP_864720.1 32471727 1794385 complement(1082949..1084172) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:E82979; hypothetical protein PA5343 [imported] - Pseudomonas; E=5e-21 gb:AAG18860.1; (AE004989) Vng0267h [Halobacterium sp. NRC-1]; E=4e-14 pir:G75470; conserved hypothetical protein - Deinococcus radiodurans; E=3e-06 COG: PA5343; COG0451 Nucleoside-diphosphate-sugar epimerases; E=5e-22 PFAM: PF00367; phosphotransferase system, EIIB; E=0.66; nucleoside-diphosphate-sugar epimerase 1084172 1794385 RB2059 Rhodopirellula baltica SH 1 nucleoside-diphosphate-sugar epimerase NP_864720.1 1082949 R 243090 CDS NP_864721.1 32471728 1792855 1084162..1085478 1 NC_005027.1 PMID: 9204764 PMID: 7845208 best DB hits: BLAST: pir:B81914; probable periplasmic serine proteinase (EC 3.4.21.-); E=1e-21 pir:S74643; proteinase hhoA (EC 3.4.-.-) - Synechocystis sp. (strain; E=1e-18 swissprot:Q52894; DEGP_RHIME PROBABLE SERINE PROTEASE DO-LIKE; E=3e-17 COG: NMB0532; COG0265 Trypsin-like serine proteases, typically; E=5e-22 CT823; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=2e-18 XF2241; COG0265 Trypsin-like serine proteases, typically; E=4e-18 PFAM: PF01215; Cytochrome c oxidase subunit Vb; E=0.4 PF00089; Trypsin; E=0.029 PF00595; PDZ domain (Also known as DHR or G; E=1.7e-06; serine protease DO-like 1085478 degP 1792855 degP Rhodopirellula baltica SH 1 serine protease DO-like NP_864721.1 1084162 D 243090 CDS NP_864722.1 32471729 1790872 1085462..1086592 1 NC_005027.1 PMID: 9204764 PMID: 7845208 best DB hits: BLAST: gb:AAK02818.1; (AE006110) HtrA [Pasteurella multocida]; E=2e-05 pir:A82581; periplasmic proteinase XF2241 [imported] - Xylella; E=2e-05 swissprot:P45129; HTOA_HAEIN PROBABLE PERIPLASMIC SERINE PROTEASE; E=3e-05 COG: XF2241; COG0265 Trypsin-like serine proteases, typically; E=2e-06 htrA; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=5e-06 VC0566; COG0265 Trypsin-like serine proteases, typically; E=4e-05 PFAM: PF00595; PDZ domain (Also known as DHR o; E=9.6e-09; serine protease 1086592 1790872 RB2066 Rhodopirellula baltica SH 1 serine protease NP_864722.1 1085462 D 243090 CDS NP_864723.1 32471730 1792427 1086596..1088749 1 NC_005027.1 hypothetical protein 1088749 1792427 RB2068 Rhodopirellula baltica SH 1 hypothetical protein NP_864723.1 1086596 D 243090 CDS NP_864724.1 32471731 1794328 1088758..1088967 1 NC_005027.1 hypothetical protein 1088967 1794328 RB2071 Rhodopirellula baltica SH 1 hypothetical protein NP_864724.1 1088758 D 243090 CDS NP_864725.1 32471732 1789953 complement(1089022..1089204) 1 NC_005027.1 hypothetical protein 1089204 1789953 RB2072 Rhodopirellula baltica SH 1 hypothetical protein NP_864725.1 1089022 R 243090 CDS NP_864726.1 32471733 1792549 1089234..1090151 1 NC_005027.1 hypothetical protein 1090151 1792549 RB2075 Rhodopirellula baltica SH 1 hypothetical protein NP_864726.1 1089234 D 243090 CDS NP_864727.1 32471734 1795789 1090282..1090434 1 NC_005027.1 hypothetical protein 1090434 1795789 RB2077 Rhodopirellula baltica SH 1 hypothetical protein NP_864727.1 1090282 D 243090 CDS NP_864728.1 32471735 1791419 complement(1090387..1091322) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:G83487; hypothetical protein PA1268 [imported] - Pseudomonas; E=6e-68 gb:AAF97423.1; AF195522_1 (AF195522) B-cell mitogen precursor; E=2e-22 embl:CAB71312.1; (AJ130879) proline racemase [Clostridium; E=4e-18 COG: VNG0332C; COG0384 Predicted epimerase, PhzC/PhzF homolog; E=0.002; proline racemase 1091322 1791419 RB2078 Rhodopirellula baltica SH 1 proline racemase NP_864728.1 1090387 R 243090 CDS NP_864729.1 32471736 1794189 complement(1091409..1091549) 1 NC_005027.1 hypothetical protein 1091549 1794189 RB2080 Rhodopirellula baltica SH 1 hypothetical protein NP_864729.1 1091409 R 243090 CDS NP_864730.1 32471737 1794615 1091484..1096037 1 NC_005027.1 PMID: 7793970 best DB hits: BLAST: gb:AAG60941.1; AF322013_60 (AF322013) ID587 [Bradyrhizobium; E=1e-105 pir:S66261; X-Pro dipeptidyl-peptidase (EC 3.4.14.11) -; E=2e-23 ddbj:BAB10391.1; (AB006701) dipeptidyl peptidase IV-like protein; E=2e-23 COG: XF0015; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; E=2e-11 PFAM: PF00930; Dipeptidyl peptidase IV (DPP IV); E=3.8e-06 PF01738; Dienelactone hydrolase; E=0.0042; X-Pro dipeptidyl-peptidase 1096037 1794615 RB2081 Rhodopirellula baltica SH 1 X-Pro dipeptidyl-peptidase NP_864730.1 1091484 D 243090 CDS NP_864731.1 32471738 1792026 complement(1096122..1096904) 1 NC_005027.1 PMID: 9512878 best DB hits: BLAST: pir:T17425; probable thioesterase (EC 3.1.2.-) pltG - Pseudomonas; E=1e-14 gb:AAC01736.1; (AF040570) thioesterase [Amycolatopsis; E=2e-14 gb:AAG52991.1; (AF040570) RifR [Amycolatopsis mediterranei]; E=2e-14 COG: PA2411; COG3208 Predicted thioesterase; E=5e-14 PFAM: PF00753; Metallo-beta-lactamase superfami; E=0.15 PF00975; Thioesterase domain; E=7.3e-32; thioesterase 1096904 pltG 1792026 pltG Rhodopirellula baltica SH 1 thioesterase NP_864731.1 1096122 R 243090 CDS NP_864732.1 32471739 1791823 complement(1096948..1097097) 1 NC_005027.1 hypothetical protein 1097097 1791823 RB2084 Rhodopirellula baltica SH 1 hypothetical protein NP_864732.1 1096948 R 243090 CDS NP_864733.1 32471740 1790828 1097128..1098594 1 NC_005027.1 PMID: 94063929 best DB hits: BLAST: gb:AAA16877.1; (L13329) iduronate-2-sulfatase [Homo sapiens]; E=4e-62 gb:AAB33747.1; iduronate-2-sulfatase, IDS {EC 3.1.6.13} [human,; E=2e-61 gb:AAA37880.1; (L07921) iduronate sulfatase [Mus musculus]; E=2e-58 COG: PA2333; COG3119 Arylsulfatase A and related enzymes; E=2e-34 yejM; COG3083 Predicted hydrolase of alkaline phosphatase; E=6e-06 Rv3077; COG3119 Arylsulfatase A and related enzymes; E=3e-05 PFAM: PF00884; Sulfatase; E=1.4e-20; iduronate-2-sulfatase 1098594 betC 1790828 betC Rhodopirellula baltica SH 1 iduronate-2-sulfatase NP_864733.1 1097128 D 243090 CDS NP_864734.1 32471741 1796880 1098564..1100600 1 NC_005027.1 PMID: 10617197 best DB hits: BLAST: gb:AAC25927.2; (AC004681) O-GlcNAc transferase; E=1e-05 gb:AAB71463.1; (AC000098) Contains similarity to Rattus O-GlcNAc; E=3e-05 pir:T02544; hypothetical protein T26B15.1 - Arabidopsis thaliana; E=8e-05 COG: BH1262; COG0457 TPR-repeat-containing proteins; E=3e-04 PFAM: PF00515; TPR Domain; E=0.06; O-GlcNAc transferase 1100600 1796880 RB2086 Rhodopirellula baltica SH 1 O-GlcNAc transferase NP_864734.1 1098564 D 243090 CDS NP_864735.1 32471742 1796037 1100666..1101931 1 NC_005027.1 hypothetical protein 1101931 1796037 RB2088 Rhodopirellula baltica SH 1 hypothetical protein NP_864735.1 1100666 D 243090 CDS NP_864736.1 32471743 1795531 1101973..1102308 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S75103; hypothetical protein ssl0438 - Synechocystis sp.; E=0.028 COG: ssl0438; COG0222 Ribosomal protein L7/L12; E=0.003; hypothetical protein 1102308 1795531 RB2090 Rhodopirellula baltica SH 1 hypothetical protein NP_864736.1 1101973 D 243090 CDS NP_864737.1 32471744 1792308 complement(1102525..1103328) 1 NC_005027.1 PMID: 10086841 best DB hits: BLAST: ddbj:BAB05636.1; (AP001513) chitooligosaccharide deacetylase; E=0.003 ddbj:BAB05021.1; (AP001511) BH1302~unknown conserved protein; E=0.004 pir:A70081; conserved hypothetical protein yxkH - Bacillus subtilis; E=0.004 COG: BH1917; COG0726 Predicted xylanase/chitin deacetylase; E=3e-04 PFAM: PF01522; Polysaccharide deacetylase; E=0.055; chitooligosaccharide deacetylase 1103328 1792308 RB2091 Rhodopirellula baltica SH 1 chitooligosaccharide deacetylase NP_864737.1 1102525 R 243090 CDS NP_864738.1 32471745 1797022 complement(1103340..1105265) 1 NC_005027.1 hypothetical protein 1105265 1797022 RB2092 Rhodopirellula baltica SH 1 hypothetical protein NP_864738.1 1103340 R 243090 CDS NP_864739.1 32471746 1796416 complement(1105484..1106467) 1 NC_005027.1 hypothetical protein 1106467 1796416 RB2096 Rhodopirellula baltica SH 1 hypothetical protein NP_864739.1 1105484 R 243090 CDS NP_864740.1 32471747 1792937 1106473..1106658 1 NC_005027.1 hypothetical protein 1106658 1792937 RB2097 Rhodopirellula baltica SH 1 hypothetical protein NP_864740.1 1106473 D 243090 CDS NP_864741.1 32471748 1794898 complement(1106613..1109489) 1 NC_005027.1 PMID: 8541651 best DB hits: BLAST: pir:B75202; d-aminoacylase (aspartate, glutamate etc) PAB0090 -; E=3e-78 swissprot:P72349; NDAD_ALCXX D-AMINOACYLASE (N-ACYL-D-AMINO-ACID; E=4e-53 swissprot:P94211; NDED_ALCXX N-ACYL-D-GLUTAMATE DEACYLASE; E=1e-51 COG: PAB0087; COG1680 Beta-lactamase class C and other penicillin binding; E=1e-25 PFAM: PF01979; Adenine deaminase; E=3.9e-08 PF00744; Dihydroorotase-like; E=0.13 PF00144; Beta-lactamase; E=0.022; D-aminoacylase 1109489 ndaD 1794898 ndaD Rhodopirellula baltica SH 1 D-aminoacylase NP_864741.1 1106613 R 243090 CDS NP_864742.1 32471749 1795521 1109368..1109658 1 NC_005027.1 hypothetical protein 1109658 1795521 RB2100 Rhodopirellula baltica SH 1 hypothetical protein NP_864742.1 1109368 D 243090 CDS NP_864743.1 32471750 1794007 complement(1109640..1109816) 1 NC_005027.1 hypothetical protein 1109816 1794007 RB2101 Rhodopirellula baltica SH 1 hypothetical protein NP_864743.1 1109640 R 243090 CDS NP_864744.1 32471751 1792343 1109792..1110028 1 NC_005027.1 hypothetical protein 1110028 1792343 RB2102 Rhodopirellula baltica SH 1 hypothetical protein NP_864744.1 1109792 D 243090 CDS NP_864745.1 32471752 1793096 1110119..1112464 1 NC_005027.1 PMID: 9634230 best DB hits: BLAST: pir:T18551; saframycin Mx1 synthetase B - Myxococcus xanthus -----; E=1e-101 pir:H83343; probable non-ribosomal peptide synthetase PA2424; E=4e-96 gb:AAG02359.1; AF210249_18 (AF210249) peptide synthetase NRPS5-4-3; E=7e-93 COG: PA2424_1; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid; E=4e-97 Rv3826; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases; E=7e-82 VNG1339C; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid; E=9e-19 PFAM: PF00501; AMP-binding enzyme; E=1.7e-07 PF00550; Phosphopantetheine attachment sit; E=1.2e-12; acyl-CoA synthetase 1112464 1793096 RB2103 Rhodopirellula baltica SH 1 acyl-CoA synthetase NP_864745.1 1110119 D 243090 CDS NP_864746.1 32471753 1792843 complement(1112600..1114012) 1 NC_005027.1 signal peptide 1114012 1792843 RB2105 Rhodopirellula baltica SH 1 signal peptide NP_864746.1 1112600 R 243090 CDS NP_864747.1 32471754 1789898 1113972..1114253 1 NC_005027.1 hypothetical protein 1114253 1789898 RB2107 Rhodopirellula baltica SH 1 hypothetical protein NP_864747.1 1113972 D 243090 CDS NP_864748.1 32471755 1790237 1114250..1115653 1 NC_005027.1 PMID: 8590279 best DB hits: BLAST: gb:AAG27731.1; AF312031_1 (AF312031) multi-drug efflux transporter; E=5e-14 swissprot:Q55364; Y896_SYNY3 HYPOTHETICAL 49.7 KDA PROTEIN SLR0896; E=1e-13 pir:E82527; multidrug efflux protein XF2686 [imported] - Xylella; E=3e-13 COG: slr0896; COG0534 Na+-driven multidrug efflux pump; E=1e-14 PFAM: PF01554; Uncharacterized membrane protein fam; E=1.6e-15; multidrug resistance protein norM 1115653 1790237 RB2110 Rhodopirellula baltica SH 1 multidrug resistance protein norM NP_864748.1 1114250 D 243090 CDS NP_864749.1 32471756 1790091 1115740..1118445 1 NC_005027.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1118445 citB 1790091 citB Rhodopirellula baltica SH 1 aconitate hydratase NP_864749.1 1115740 D 243090 CDS NP_864750.1 32471757 1796729 1118463..1120007 1 NC_005027.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 1120007 speE 1796729 speE Rhodopirellula baltica SH 1 spermidine synthase NP_864750.1 1118463 D 243090 CDS NP_864751.1 32471758 1791633 1120043..1120354 1 NC_005027.1 hypothetical protein 1120354 1791633 RB2116 Rhodopirellula baltica SH 1 hypothetical protein NP_864751.1 1120043 D 243090 CDS NP_864752.1 32471759 1791443 complement(1120297..1120638) 1 NC_005027.1 PMID: 11859360 best DB hits: BLAST: pir:A30185; nuclear protein nuc2+ - fission yeast; E=0.38 pir:T11581; nuclear scaffold-like protein p76 - fission yeast; E=0.38 swissprot:P10505; NUC2_SCHPO NUCLEAR SCAFFOLD-LIKE PROTEIN P76; E=0.38 PFAM: PF00515; TPR Domain; E=2.1e-05; nuclear scaffold-like protein p76 1120638 1791443 RB2117 Rhodopirellula baltica SH 1 nuclear scaffold-like protein p76 NP_864752.1 1120297 R 243090 CDS NP_864753.1 32471760 1791065 complement(1120813..1121961) 1 NC_005027.1 PMID: 1521767 best DB hits: BLAST: swissprot:P27433; GCPE_ECOLI GCPE PROTEIN (PROTEIN E) -----; E=6e-47 pir:F82283; gcpE protein VC0759 [imported] - Vibrio cholerae (group; E=1e-46 gb:AAK04094.1; (AE006237) GcpE [Pasteurella multocida]; E=2e-46 COG: gcpE; COG0821 Essential bacterial protein, involved in; E=6e-48; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 1121961 gcpE 1791065 gcpE Rhodopirellula baltica SH 1 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase NP_864753.1 1120813 R 243090 CDS NP_864754.1 32471761 1790258 1121915..1122079 1 NC_005027.1 hypothetical protein 1122079 1790258 RB2120 Rhodopirellula baltica SH 1 hypothetical protein NP_864754.1 1121915 D 243090 CDS NP_864755.1 32471762 1794961 complement(1122146..1123042) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:D75557; conserved hypothetical protein - Deinococcus radiodurans; E=8e-57 pir:S77243; hypothetical protein slr1363 - Synechocystis sp. (strain; E=1e-32 pir:F83213; conserved hypothetical protein PA3455 [imported] -; E=9e-28 COG: DR0132; COG2326 Uncharacterized BCR; E=8e-58; hypothetical protein 1123042 1794961 RB2121 Rhodopirellula baltica SH 1 hypothetical protein NP_864755.1 1122146 R 243090 CDS NP_864756.1 32471763 1792952 complement(1123056..1123271) 1 NC_005027.1 hypothetical protein 1123271 1792952 RB2123 Rhodopirellula baltica SH 1 hypothetical protein NP_864756.1 1123056 R 243090 CDS NP_864757.1 32471764 1792158 complement(1123268..1123954) 1 NC_005027.1 signal peptide 1123954 1792158 RB2125 Rhodopirellula baltica SH 1 signal peptide NP_864757.1 1123268 R 243090 CDS NP_864758.1 32471765 1793569 complement(1124750..1128004) 1 NC_005027.1 signal peptide 1128004 1793569 RB2132 Rhodopirellula baltica SH 1 signal peptide NP_864758.1 1124750 R 243090 CDS NP_864759.1 32471766 1796988 complement(1127997..1129463) 1 NC_005027.1 PMID: 11181566 best DB hits: BLAST: gb:AAG41945.1; AF304053_1 (AF304053) heparan N-sulfatase [Mus; E=4e-62 gb:AAF29467.1; (AF156255) N-sulfoglucosamine sulfohydrolase [Mus; E=6e-62 gb:AAG41946.1; AF304054_1 (AF304054) mutant heparan N-sulfatase; E=1e-61 COG: Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=7e-23 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=0.002 BS_yfnI; COG1368 Phosphoglycerol transferase and related proteins,; E=0.002 PFAM: PF00884; Sulfatase; E=7.8e-22; heparan N-sulfatase 1129463 1796988 RB2135 Rhodopirellula baltica SH 1 heparan N-sulfatase NP_864759.1 1127997 R 243090 CDS NP_864760.1 32471767 1792592 1129426..1131408 1 NC_005027.1 best DB hits: BLAST: gb:AAD26901.1; AC007267_1 (AC007267) leucine-rich repeat; E=0.011 gb:AAF82144.1; AC034256_8 (AC034256) Contains similarity to F-box; E=0.040 pir:T08903; hypothetical protein T32A16.10 - Arabidopsis thaliana; E=0.25; hypothetical protein 1131408 1792592 RB2136 Rhodopirellula baltica SH 1 hypothetical protein NP_864760.1 1129426 D 243090 CDS NP_864761.1 32471768 1790115 1131458..1131607 1 NC_005027.1 hypothetical protein 1131607 1790115 RB2140 Rhodopirellula baltica SH 1 hypothetical protein NP_864761.1 1131458 D 243090 CDS NP_864762.1 32471769 1791975 complement(1131677..1132375) 1 NC_005027.1 PMID: 1630901,7493321 best DB hits: BLAST: swissprot:P39219; RLUA_ECOLI RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE; E=5e-15 gb:AAG54362.1; AE005182_11 (AE005182) orf, hypothetical protein; E=3e-14 pir:C82498; ribosomal large chain pseudouridine synthase A VCA0104; E=5e-14 COG: rluA; COG0564 Pseudouridylate synthases, 23S RNA-specific; E=5e-16 PFAM: PF00849; RNA pseudouridylate synthase; E=4.8e-31; ribosomal large subunit pseudouridine synthase A 1132375 rluA 1791975 rluA Rhodopirellula baltica SH 1 ribosomal large subunit pseudouridine synthase A NP_864762.1 1131677 R 243090 CDS NP_864763.1 32471770 1796044 complement(1132342..1133277) 1 NC_005027.1 PMID: 10993077 best DB hits: BLAST: pir:H82272; conserved hypothetical protein VC0853 [imported] -; E=3e-38 pir:D83259; conserved hypothetical protein PA3088 [imported] -; E=3e-36 gb:AAK02417.1; (AE006069) unknown [Pasteurella multocida]; E=5e-33 COG: VC0853; COG0061 Predicted kinase; E=2e-39 PFAM: PF01513; Domain of unknown function DUF15; E=6.2e-72; inorganic polyphosphate/ATP-NAD kinase 1133277 1796044 RB2142 Rhodopirellula baltica SH 1 inorganic polyphosphate/ATP-NAD kinase NP_864763.1 1132342 R 243090 CDS NP_864765.1 32471771 1791162 complement(1133232..1135139) 1 NC_005027.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 1135139 dxs 1791162 dxs Rhodopirellula baltica SH 1 1-deoxy-D-xylulose-5-phosphate synthase NP_864765.1 1133232 R 243090 CDS NP_864766.1 32471772 1793946 complement(1135136..1136089) 1 NC_005027.1 PMID: 8016276,10617198 best DB hits: BLAST: pir:S74538; geranylgeranyl pyrophosphate synthase - Synechocystis; E=3e-37 ddbj:BAA82613.1; (AB016093) geranylgeranyl diphosphate synthase; E=1e-36 embl:CAC10561.1; (AJ249453) gpp synthase large subunit [Mentha x; E=1e-35 COG: slr0739; COG0142 Geranylgeranyl pyrophosphate synthase; E=3e-38 PFAM: PF00348; Polyprenyl synthetase; E=1.6e-83; geranylgeranyl pyrophosphate synthetase [precursor] 1136089 ggpP 1793946 ggpP Rhodopirellula baltica SH 1 geranylgeranyl pyrophosphate synthetase [precursor] NP_864766.1 1135136 R 243090 CDS NP_864767.1 32471773 1790185 complement(1136086..1136505) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:C82778; exodeoxyribonuclease small subunit XF0660 [imported] -; E=1e-04 pir:E83139; exodeoxyribonuclease VII small subunit PA4042; E=0.001 gb:AAF12842.1; AF203881_15 (AF203881) exodeoxyribonuclease small; E=0.008 COG: XF0660; COG1722 Exonuclease VII small subunit; E=1e-05; exodeoxyribonuclease VII small subunit 1136505 xseB 1790185 xseB Rhodopirellula baltica SH 1 exodeoxyribonuclease VII small subunit NP_864767.1 1136086 R 243090 CDS NP_864768.1 32471774 1796733 complement(1136498..1136689) 1 NC_005027.1 hypothetical protein 1136689 1796733 RB2147 Rhodopirellula baltica SH 1 hypothetical protein NP_864768.1 1136498 R 243090 CDS NP_864769.1 32471775 1791092 1136676..1137986 1 NC_005027.1 PMID: 20075061 best DB hits: BLAST: ddbj:BAA89233.1; (AB021180) skeletal myosin heavy chain [Gallus; E=0.15 pir:A32491; myosin heavy chain 1, muscle - fruit fly (Drosophila; E=0.34 pir:B32491; myosin heavy chain 2, muscle - fruit fly (Drosophila; E=0.41; hypothetical protein 1137986 1791092 RB2148 Rhodopirellula baltica SH 1 hypothetical protein NP_864769.1 1136676 D 243090 CDS NP_864770.1 32471776 1794493 complement(1138030..1138311) 1 NC_005027.1 hypothetical protein 1138311 1794493 RB2150 Rhodopirellula baltica SH 1 hypothetical protein NP_864770.1 1138030 R 243090 CDS NP_864771.1 32471777 1791611 complement(1138372..1138839) 1 NC_005027.1 best DB hits: PFAM: PF00293; MutT-like domain; E=4.2e-24; hypothetical protein 1138839 1791611 RB2152 Rhodopirellula baltica SH 1 hypothetical protein NP_864771.1 1138372 R 243090 CDS NP_864772.1 32471778 1790292 complement(1138946..1140193) 1 NC_005027.1 signal peptide 1140193 1790292 RB2154 Rhodopirellula baltica SH 1 signal peptide NP_864772.1 1138946 R 243090 CDS NP_864773.1 32471779 1790475 complement(1140190..1140660) 1 NC_005027.1 hypothetical protein 1140660 1790475 RB2155 Rhodopirellula baltica SH 1 hypothetical protein NP_864773.1 1140190 R 243090 CDS NP_864774.1 32471780 1792613 complement(1140679..1140837) 1 NC_005027.1 hypothetical protein 1140837 1792613 RB2156 Rhodopirellula baltica SH 1 hypothetical protein NP_864774.1 1140679 R 243090 CDS NP_864775.1 32471781 1790041 complement(1140771..1141043) 1 NC_005027.1 hypothetical protein 1141043 1790041 RB2158 Rhodopirellula baltica SH 1 hypothetical protein NP_864775.1 1140771 R 243090 CDS NP_864776.1 32471782 1790279 1141002..1143161 1 NC_005027.1 PMID: 2453362 best DB hits: BLAST: swissprot:P09961; AMY1_DICTH ALPHA-AMYLASE 1 (1,4-ALPHA-D-GLUCAN; E=1e-120 ddbj:BAA22063.1; (D88253) 4-alpha-glucanotransferase; E=1e-114 ddbj:BAA22062.1; (D87907) 4-alpha-glucanotransferase [Pyrococcus; E=1e-112 COG: PAB0118; COG1449 Alpha-amylase/alpha-mannosidase; E=1e-111 Rv3031; COG1543 Uncharacterized ACR; E=1e-04; alpha-amylase 1143161 1790279 RB2160 Rhodopirellula baltica SH 1 alpha-amylase NP_864776.1 1141002 D 243090 CDS NP_864777.1 32471783 1792045 1143214..1144158 1 NC_005027.1 PMID: 9634230 best DB hits: BLAST: ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=4e-24 pir:D83637; serinethreonine protein kinase PpkA PA0074 [imported] -; E=1e-23 gb:AAD03499.2; (AF035395) serinethreonine protein kinase PpkA; E=2e-23 COG: BH2504_1; COG0515 Serine/threonine protein kinases; E=4e-25 PFAM: PF00069; Protein kinase domain; E=3.2e-44; serine/threonine-protein kinase pknH 1144158 pknH 1792045 pknH Rhodopirellula baltica SH 1 serine/threonine-protein kinase pknH NP_864777.1 1143214 D 243090 CDS NP_864778.1 32471784 1795662 complement(1144252..1144569) 1 NC_005027.1 signal peptide 1144569 1795662 RB2163 Rhodopirellula baltica SH 1 signal peptide NP_864778.1 1144252 R 243090 CDS NP_864779.1 32471785 1795875 complement(1144790..1146214) 1 NC_005027.1 best DB hits: PFAM: PF02746; Mandelate racemase / muconate lacton; E=0.04; hypothetical protein 1146214 1795875 RB2166 Rhodopirellula baltica SH 1 hypothetical protein NP_864779.1 1144790 R 243090 CDS NP_864780.1 32471786 1796197 1146271..1146378 1 NC_005027.1 hypothetical protein 1146378 1796197 RB2168 Rhodopirellula baltica SH 1 hypothetical protein NP_864780.1 1146271 D 243090 CDS NP_864781.1 32471787 1789895 1146430..1147911 1 NC_005027.1 PMID: 11823852; hypothetical protein 1147911 1789895 RB2170 Rhodopirellula baltica SH 1 hypothetical protein NP_864781.1 1146430 D 243090 CDS NP_864782.1 32471788 1791851 complement(1146895..1147959) 1 NC_005027.1 hypothetical protein 1147959 1791851 RB2173 Rhodopirellula baltica SH 1 hypothetical protein NP_864782.1 1146895 R 243090 CDS NP_864783.1 32471789 1793029 1148065..1148514 1 NC_005027.1 PMID: 1558950 best DB hits: BLAST: gb:AAB38544.1; (L41661) srrB [Synechococcus sp.]; E=5e-09 pir:A71678; probable response regulatory protein RP237 - Rickettsia; E=2e-08 gb:AAD51348.1; AF173226_5 (AF173226) SmeR [Stenotrophomonas; E=7e-08 COG: RP237_1; COG0784 CheY-like receiver domains; E=7e-09 PA2523; COG0745 Response regulators consisting of a CheY-like; E=9e-08 VC0622_4; COG0784 CheY-like receiver domains; E=9e-08 PFAM: PF00072; Response regulator receiver doma; E=1.1e-10; transcriptional regulator 1148514 1793029 RB2174 Rhodopirellula baltica SH 1 transcriptional regulator NP_864783.1 1148065 D 243090 CDS NP_864784.1 32471790 1794644 1148511..1148807 1 NC_005027.1 signal peptide 1148807 1794644 RB2175 Rhodopirellula baltica SH 1 signal peptide NP_864784.1 1148511 D 243090 CDS NP_864785.1 32471791 1792335 1148648..1149025 1 NC_005027.1 best DB hits: BLAST: pir:E83085; conserved hypothetical protein PA4488 [imported] -; E=0.81; hypothetical protein 1149025 1792335 RB2176 Rhodopirellula baltica SH 1 hypothetical protein NP_864785.1 1148648 D 243090 CDS NP_864786.1 32471792 1793146 1149035..1149685 1 NC_005027.1 hypothetical protein 1149685 1793146 RB2178 Rhodopirellula baltica SH 1 hypothetical protein NP_864786.1 1149035 D 243090 CDS NP_864787.1 32471793 1790220 1149988..1150587 1 NC_005027.1 hypothetical protein 1150587 1790220 RB2179 Rhodopirellula baltica SH 1 hypothetical protein NP_864787.1 1149988 D 243090 CDS NP_864788.1 32471794 1793589 1150628..1151242 1 NC_005027.1 hypothetical protein 1151242 1793589 RB2181 Rhodopirellula baltica SH 1 hypothetical protein NP_864788.1 1150628 D 243090 CDS NP_864789.1 32471795 1790481 complement(1151579..1152463) 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S77171; transposase sll1710 - Synechocystis sp. (strain PCC; E=1e-55 gb:AAB72024.1; (U38799) transposase [Synechocystis sp.]; E=7e-55 pir:S35005; probable transposase - Acetobacter xylinus insertion; E=1e-54 COG: sll1710; COG3293 Predicted transposase; E=9e-57 PFAM: PF01511; Transposase; E=9e-35 PF01675; Transposase; E=2.1e-31; transposase 1152463 1790481 RB2182 Rhodopirellula baltica SH 1 transposase NP_864789.1 1151579 R 243090 CDS NP_864790.1 32471796 1796977 complement(1152529..1152681) 1 NC_005027.1 hypothetical protein 1152681 1796977 RB2185 Rhodopirellula baltica SH 1 hypothetical protein NP_864790.1 1152529 R 243090 CDS NP_864791.1 32471797 1790582 complement(1152692..1153993) 1 NC_005027.1 best DB hits: BLAST: gb:AAD45539.1; U70376_1 (U70376) InsA [Streptomyces netropsis]; E=5e-33 gb:AAG60893.1; AF322013_12 (AF322013) ID460 [Bradyrhizobium; E=8e-33 ddbj:BAA19966.1; (D63923) transposase [Acetobacter pasteurianus]; E=1e-26; InsA (transposase) 1153993 InsA 1790582 InsA Rhodopirellula baltica SH 1 InsA (transposase) NP_864791.1 1152692 R 243090 CDS NP_864792.1 32471798 1792826 1153971..1154114 1 NC_005027.1 hypothetical protein 1154114 1792826 RB2187 Rhodopirellula baltica SH 1 hypothetical protein NP_864792.1 1153971 D 243090 CDS NP_864793.1 32471799 1792544 1154177..1154584 1 NC_005027.1 hypothetical protein 1154584 1792544 RB2188 Rhodopirellula baltica SH 1 hypothetical protein NP_864793.1 1154177 D 243090 CDS NP_864794.1 32471800 1791019 1154761..1155291 1 NC_005027.1 hypothetical protein 1155291 1791019 RB2190 Rhodopirellula baltica SH 1 hypothetical protein NP_864794.1 1154761 D 243090 CDS NP_864795.1 32471801 1796956 1155340..1156002 1 NC_005027.1 hypothetical protein 1156002 1796956 RB2191 Rhodopirellula baltica SH 1 hypothetical protein NP_864795.1 1155340 D 243090 CDS NP_864796.1 32471802 1795551 1156095..1156949 1 NC_005027.1 PMID: 11337471 best DB hits: BLAST: gb:AAK05788.1; AE006399_9 (AE006399) UNKNOWN PROTEIN [Lactococcus; E=1e-18; hypothetical protein 1156949 1795551 RB2193 Rhodopirellula baltica SH 1 hypothetical protein NP_864796.1 1156095 D 243090 CDS NP_864797.1 32471803 1796708 complement(1157029..1157313) 1 NC_005027.1 hypothetical protein 1157313 1796708 RB2197 Rhodopirellula baltica SH 1 hypothetical protein NP_864797.1 1157029 R 243090 CDS NP_864798.1 32471804 1790748 1157235..1157486 1 NC_005027.1 hypothetical protein 1157486 1790748 RB2198 Rhodopirellula baltica SH 1 hypothetical protein NP_864798.1 1157235 D 243090 CDS NP_864799.1 32471805 1796676 complement(1157514..1159097) 1 NC_005027.1 PMID: 10910347 best DB hits: BLAST: pir:C82162; conserved hypothetical protein VC1751 [imported] -; E=3e-56 swissprot:O52401; YGGB_EDWIC HYPOTHETICAL 30.6 KDA PROTEIN IN; E=4e-41 pir:A82318; conserved hypothetical protein VC0480 [imported] -; E=5e-40 COG: VC1751; COG0668 Small-conductance mechanosensitive channel; E=3e-57 PFAM: PF00924; Uncharacterized protein family UPF00; E=2.9e-71; small conductance mechanosensitive ion channel 1159097 1796676 RB2200 Rhodopirellula baltica SH 1 small conductance mechanosensitive ion channel NP_864799.1 1157514 R 243090 CDS NP_864800.1 32471806 1795487 1159076..1159273 1 NC_005027.1 hypothetical protein 1159273 1795487 RB2201 Rhodopirellula baltica SH 1 hypothetical protein NP_864800.1 1159076 D 243090 CDS NP_864801.1 32471807 1795829 1159286..1160347 1 NC_005027.1 PMID: 3026906 best DB hits: BLAST: pir:S74628; hypothetical protein slr1772 - Synechocystis sp. (strain; E=1e-122 pir:E82406; probable hydrolase VCA0877 [imported] - Vibrio cholerae; E=6e-50 swissprot:P12256; PAC_BACSH PENICILLIN ACYLASE (PENICILLIN V; E=1e-09 COG: slr1772; COG3049 Penicillin V acylase and related amidases; E=1e-124 PFAM: PF02275; Choloylglycine hydrolase; E=7.3e-95; penicillin acylase 1160347 1795829 RB2202 Rhodopirellula baltica SH 1 penicillin acylase NP_864801.1 1159286 D 243090 CDS NP_864802.1 32471808 1793031 complement(1160319..1160492) 1 NC_005027.1 hypothetical protein 1160492 1793031 RB2203 Rhodopirellula baltica SH 1 hypothetical protein NP_864802.1 1160319 R 243090 CDS NP_864803.1 32471809 1796147 complement(1160497..1161396) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:A75323; probable chromosome partitioning ATPase, ParA family -; E=1e-15 swissprot:P31856; YGI1_PSEPU HYPOTHETICAL 28.9 KD PROTEIN IN; E=1e-08 pir:S72958; hypothetical protein u0247b - Mycobacterium leprae; E=2e-08 COG: DR2040; COG1192 ATPases involved in chromosome partitioning; E=9e-17 BU326; COG2894 Septum formation inhibitor-activating ATPase; E=1e-04 VC2773; COG1192 ATPases involved in chromosome partitioning; E=2e-04 PFAM: PF02374; Anion-transporting ATPase; E=0.0058 PF00991; ParA family ATPase; E=2.6e-05; ParA family chromosome partitioning ATPase 1161396 1796147 RB2204 Rhodopirellula baltica SH 1 ParA family chromosome partitioning ATPase NP_864803.1 1160497 R 243090 CDS NP_864804.1 32471810 1796604 complement(1161466..1161648) 1 NC_005027.1 hypothetical protein 1161648 1796604 RB2205 Rhodopirellula baltica SH 1 hypothetical protein NP_864804.1 1161466 R 243090 CDS NP_864805.1 32471811 1794715 complement(1161608..1162279) 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S76621; hypothetical protein - Synechocystis sp. (strain PCC; E=9e-23 ddbj:BAA84086.1; (AB032065) hypothetical protein [Streptomyces; E=6e-21 embl:CAB61873.1; (AL133252) hypothetical protein SCE46.22; E=6e-21 COG: slr0092; COG0463 Glycosyltransferases involved in cell wall; E=8e-24 PAB1314; COG1215 Glycosyltransferases, probably involved in cell; E=2e-07 Rv2957; COG0463 Glycosyltransferases involved in cell wall; E=7e-07 PFAM: PF00535; Glycosyl transferase; E=2.6e-21; hypothetical protein 1162279 1794715 RB2206 Rhodopirellula baltica SH 1 hypothetical protein NP_864805.1 1161608 R 243090 CDS NP_864806.1 32471812 1793740 complement(1162331..1163572) 1 NC_005027.1 signal peptide 1163572 1793740 RB2209 Rhodopirellula baltica SH 1 signal peptide NP_864806.1 1162331 R 243090 CDS NP_864807.1 32471813 1797068 1163498..1163779 1 NC_005027.1 hypothetical protein 1163779 1797068 RB2211 Rhodopirellula baltica SH 1 hypothetical protein NP_864807.1 1163498 D 243090 CDS NP_864808.1 32471814 1791941 1163797..1164273 1 NC_005027.1 hypothetical protein 1164273 1791941 RB2212 Rhodopirellula baltica SH 1 hypothetical protein NP_864808.1 1163797 D 243090 CDS NP_864809.1 32471815 1794352 complement(1164291..1164998) 1 NC_005027.1 hypothetical protein 1164998 1794352 RB2216 Rhodopirellula baltica SH 1 hypothetical protein NP_864809.1 1164291 R 243090 CDS NP_864810.1 32471816 1791646 1165024..1166499 1 NC_005027.1 hypothetical protein 1166499 1791646 RB2217 Rhodopirellula baltica SH 1 hypothetical protein NP_864810.1 1165024 D 243090 CDS NP_864811.1 32471817 1795611 complement(1166576..1166764) 1 NC_005027.1 hypothetical protein 1166764 1795611 RB2221 Rhodopirellula baltica SH 1 hypothetical protein NP_864811.1 1166576 R 243090 CDS NP_864812.1 32471818 1796801 1166754..1167413 1 NC_005027.1 signal peptide 1167413 1796801 RB2222 Rhodopirellula baltica SH 1 signal peptide NP_864812.1 1166754 D 243090 CDS NP_864813.1 32471819 1791715 complement(1167491..1167613) 1 NC_005027.1 hypothetical protein 1167613 1791715 RB2225 Rhodopirellula baltica SH 1 hypothetical protein NP_864813.1 1167491 R 243090 CDS NP_864814.1 32471820 1793665 1167675..1173032 1 NC_005027.1 PMID: 7557402 best DB hits: BLAST: swissprot:Q00808; HET1_PODAN VEGETATIBLE INCOMPATIBILITY PROTEIN; E=7e-18 swissprot:P49695; PKWA_THECU SERINETHREONINE-PROTEIN; E=4e-13 gb:AAG40737.1; AF299085_1 (AF299085) Bap1 [Myxococcus xanthus]; E=2e-12 COG: slr0143_2; COG2319 WD40 repeat protein; E=2e-09 PFAM: PF00400; WD domain, G-beta repeat; E=0.2 PF01011; PQQ enzyme repeat; E=0.66 PF00400; WD domain, G-beta repeat; E=0.12; vegetatible incompatibility protein HET-E-1 1173032 1793665 RB2226 Rhodopirellula baltica SH 1 vegetatible incompatibility protein HET-E-1 NP_864814.1 1167675 D 243090 CDS NP_864815.1 32471821 1794126 1173061..1174557 1 NC_005027.1 hypothetical protein 1174557 1794126 RB2231 Rhodopirellula baltica SH 1 hypothetical protein NP_864815.1 1173061 D 243090 CDS NP_864816.1 32471822 1791790 1174607..1174843 1 NC_005027.1 hypothetical protein 1174843 1791790 RB2234 Rhodopirellula baltica SH 1 hypothetical protein NP_864816.1 1174607 D 243090 CDS NP_864817.1 32471823 1796142 1174887..1175042 1 NC_005027.1 hypothetical protein 1175042 1796142 RB2235 Rhodopirellula baltica SH 1 hypothetical protein NP_864817.1 1174887 D 243090 CDS NP_864818.1 32471824 1795389 complement(1175268..1175519) 1 NC_005027.1 hypothetical protein 1175519 1795389 RB2237 Rhodopirellula baltica SH 1 hypothetical protein NP_864818.1 1175268 R 243090 CDS NP_864819.1 32471825 1790780 1175510..1176826 1 NC_005027.1 PMID: 8125952 best DB hits: BLAST: swissprot:P39662; HMPA_ALCEU FLAVOHEMOPROTEIN (HEMOGLOBIN-LIKE; E=7e-29 swissprot:P49852; HMPA_BACSU FLAVOHEMOPROTEIN (HEMOGLOBIN-LIKE; E=2e-26 swissprot:P26353; HMPA_SALTY FLAVOHEMOPROTEIN (HEMOGLOBIN-LIKE; E=2e-26 COG: BS_hmp_2; COG1018 Flavodoxin reductases (ferredoxin-NADPH; E=1e-27 hmp_2; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases); E=5e-25 BH1058_2; COG1018 Flavodoxin reductases (ferredoxin-NADPH; E=5e-23 PFAM: PF00970; Oxidoreductase FAD-binding doma; E=3.5e-24 PF01794; Ferric reductase like transmemb; E=0.76 PF00175; Oxidoreductase FAD/NAD-binding; E=2e-05; flavohemoprotein 1176826 1790780 RB2238 Rhodopirellula baltica SH 1 flavohemoprotein NP_864819.1 1175510 D 243090 CDS NP_864820.1 32471826 1794020 complement(1176975..1177865) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:G75333; 3-oxoacyl-acyl carrier protein reductase - Deinococcus; E=1e-16 gb:AAB82041.1; (U59236) unknown [Synechococcus sp. PCC 7942]; E=1e-16 pir:E83152; probable short-chain dehydrogenase PA3957 [imported] -; E=4e-16 COG: DR1943; COG1028 Dehydrogenases with different specificities (related; E=9e-18 BH1506; COG0300 Short-chain dehydrogenases of various substrate; E=3e-15 VNG1341G; COG1028 Dehydrogenases with different specificities; E=3e-14 PFAM: PF00106; short chain dehydrogenase; E=9.2e-43; short-chain dehydrogenase 1177865 1794020 RB2239 Rhodopirellula baltica SH 1 short-chain dehydrogenase NP_864820.1 1176975 R 243090 CDS NP_864821.1 32471827 1790000 complement(1177796..1178527) 1 NC_005027.1 PMID: 10952301 best DB hits: BLAST: pir:G82383; oxidoreductase, short-chain dehydrogenasereductase; E=2e-20 gb:AAG54602.1; AE005204_12 (AE005204) oxidoreductase; E=7e-20 gb:AAF18286.1; (AF088897) oxidoreductase; orf4 [Zymomonas; E=6e-19 COG: VCA1057; COG0300 Short-chain dehydrogenases of various substrate; E=2e-21 slr0315; COG1028 Dehydrogenases with different specificities; E=7e-20 PA4148; COG1028 Dehydrogenases with different specificities (related; E=3e-18 PFAM: PF00106; short chain dehydrogenase; E=5.3e-49; short chain dehydrogenase/reductase oxidoreductase 1178527 1790000 RB2242 Rhodopirellula baltica SH 1 short chain dehydrogenase/reductase oxidoreductase NP_864821.1 1177796 R 243090 CDS NP_864822.1 32471828 1793604 1178675..1179253 1 NC_005027.1 PMID: 11859360 best DB hits: BLAST: pir:T44271; glutathione peroxidase homolog [imported] -; E=4e-40 embl:CAB88451.1; (AL353815) glutathione peroxidase; E=4e-38 pir:F83541; probable glutathione peroxidase PA0838 [imported] -; E=5e-38 COG: PA0838; COG0386 Glutathione peroxidase; E=5e-39 PFAM: PF00255; Glutathione peroxidase; E=7e-54; glutathione peroxidase 1179253 1793604 RB2244 Rhodopirellula baltica SH 1 glutathione peroxidase NP_864822.1 1178675 D 243090 CDS NP_864823.1 32471829 1795398 complement(1179499..1181238) 1 NC_005027.1 best DB hits: BLAST: gb:AAG19229.1; (AE005019) Vng0754c [Halobacterium sp. NRC-1]; E=9e-06 gb:AAF75279.1; AF265353_1 (AF265353) byssal protein Dpfp1; E=0.21 ddbj:BAA94345.1; (AB035520) parchorin [Oryctolagus cuniculus]; E=0.50 PFAM: PF00089; Trypsin; E=0.58; hypothetical protein 1181238 1795398 RB2247 Rhodopirellula baltica SH 1 hypothetical protein NP_864823.1 1179499 R 243090 CDS NP_864824.1 32471830 1795525 complement(1181487..1181714) 1 NC_005027.1 hypothetical protein 1181714 1795525 RB2251 Rhodopirellula baltica SH 1 hypothetical protein NP_864824.1 1181487 R 243090 CDS NP_864825.1 32471831 1791039 complement(1181540..1181701) 1 NC_005027.1 hypothetical protein 1181701 1791039 RB2252 Rhodopirellula baltica SH 1 hypothetical protein NP_864825.1 1181540 R 243090 CDS NP_864826.1 32471832 1792432 1181661..1182374 1 NC_005027.1 modulates transcription in response to the NADH/NAD(+) redox state; redox-sensing transcriptional repressor Rex 1182374 1792432 RB2253 Rhodopirellula baltica SH 1 redox-sensing transcriptional repressor Rex NP_864826.1 1181661 D 243090 CDS NP_864827.1 32471833 1791287 complement(1182443..1184068) 1 NC_005027.1 PMID: 8244397 PMID: 8325651 best DB hits: BLAST: gb:AAA16877.1; (L13329) iduronate-2-sulfatase [Homo sapiens]; E=1e-44 gb:AAA37880.1; (L07921) iduronate sulfatase [Mus musculus]; E=1e-44 gb:AAB33747.1; iduronate-2-sulfatase, IDS {EC 3.1.6.13} [human,; E=5e-44 COG: PA0031; COG3119 Arylsulfatase A and related enzymes; E=3e-38 BS_yqgS; COG1368 Phosphoglycerol transferase and related proteins,; E=0.001 aslA; COG3119 Arylsulfatase A and related enzymes; E=0.001 PFAM: PF00884; Sulfatase; E=3.2e-21; iduronate-2-sulfatase 1184068 1791287 RB2254 Rhodopirellula baltica SH 1 iduronate-2-sulfatase NP_864827.1 1182443 R 243090 CDS NP_864828.1 32471834 1790737 complement(1184132..1186018) 1 NC_005027.1 hypothetical protein 1186018 1790737 RB2255 Rhodopirellula baltica SH 1 hypothetical protein NP_864828.1 1184132 R 243090 CDS NP_864829.1 32471835 1790656 complement(1186140..1186325) 1 NC_005027.1 hypothetical protein 1186325 1790656 RB2258 Rhodopirellula baltica SH 1 hypothetical protein NP_864829.1 1186140 R 243090 CDS NP_864830.1 32471836 1796378 1186316..1187020 1 NC_005027.1 hypothetical protein 1187020 1796378 RB2259 Rhodopirellula baltica SH 1 hypothetical protein NP_864830.1 1186316 D 243090 CDS NP_864831.1 32471837 1792134 complement(1187169..1187276) 1 NC_005027.1 hypothetical protein 1187276 1792134 RB2260 Rhodopirellula baltica SH 1 hypothetical protein NP_864831.1 1187169 R 243090 CDS NP_864832.1 32471838 1792111 complement(1187245..1188873) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:C75455; carboxypeptidase-related protein - Deinococcus; E=1e-118 pir:E82699; carboxypeptidase related protein XF1282 [imported] -; E=8e-47 embl:CAA96915.1; (Z72725) ORF YGL203c [Saccharomyces cerevisiae]; E=1e-05 COG: DR0964; COG2939 Carboxypeptidase C (cathepsin A); E=1e-119; carboxypeptidase-related protein 1188873 1792111 RB2261 Rhodopirellula baltica SH 1 carboxypeptidase-related protein NP_864832.1 1187245 R 243090 CDS NP_864833.1 32471839 1795097 complement(1188777..1188965) 1 NC_005027.1 hypothetical protein 1188965 1795097 RB2262 Rhodopirellula baltica SH 1 hypothetical protein NP_864833.1 1188777 R 243090 CDS NP_864834.1 32471840 1793109 1188804..1188956 1 NC_005027.1 hypothetical protein 1188956 1793109 RB2263 Rhodopirellula baltica SH 1 hypothetical protein NP_864834.1 1188804 D 243090 CDS NP_864835.1 32471841 1794473 1189102..1189608 1 NC_005027.1 PMID: 9632260 best DB hits: BLAST: swissprot:O68284; MSCL_ERWCA LARGE-CONDUCTANCE MECHANOSENSITIVE; E=2e-13 pir:F82855; large-conductance mechanosensitive channel XF0039; E=4e-13 pir:F83069; conductance mechanosensitive channel PA4614 [imported] -; E=2e-12 COG: XF0039; COG1970 Large-conductance mechanosensitive channel; E=4e-14 PFAM: PF01741; Large-conductance mechanosens; E=1.4e-22; large-conductance mechanosensitive channel 1189608 1794473 RB2264 Rhodopirellula baltica SH 1 large-conductance mechanosensitive channel NP_864835.1 1189102 D 243090 CDS NP_864836.1 32471842 1797003 1189523..1190518 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:B75555; probable lipaseesterase - Deinococcus radiodurans; E=4e-09 pir:E70914; probable lipO protein - Mycobacterium tuberculosis; E=2e-05 swissprot:P26223; XYNB_BUTFI ENDO-1,4-BETA-XYLANASE B (XYLANASE B); E=3e-04 COG: DR0133; COG0657 Acetyl esterase; E=4e-10 PFAM: PF00326; Prolyl oligopeptidase; E=0.067 PF01738; Dienelactone hydrolase; E=0.00016 PF00561; alpha/beta hydrolase fold; E=0.17; lipase/esterase 1190518 1797003 RB2265 Rhodopirellula baltica SH 1 lipase/esterase NP_864836.1 1189523 D 243090 CDS NP_864837.1 32471843 1794816 complement(1190541..1191389) 1 NC_005027.1 PMID: 9278503 best DB hits: BLAST: pir:C81315; hypothetical protein Cj1112c [imported] - Campylobacter; E=9e-33 embl:CAB80845.1; (AL161501) protein [Arabidopsis; E=4e-27 gb:AAD03449.1; (AF118223) contains similarity to Methanobacterium; E=5e-27 COG: Cj1112c; COG0229 Conserved domain frequently associated with peptide; E=8e-34 VNG1404G; COG0229 Conserved domain frequently associated with; E=5e-19 XF0849; COG0229 Conserved domain frequently associated with peptide; E=2e-17 PFAM: PF01641; Domain of unknown function DUF25; E=3.7e-46; peptide methionine sulfoxide reductase 1191389 msrB 1794816 msrB Rhodopirellula baltica SH 1 peptide methionine sulfoxide reductase NP_864837.1 1190541 R 243090 CDS NP_864838.1 32471844 1792031 complement(1191509..1192471) 1 NC_005027.1 PMID: 8590279 best DB hits: BLAST: swissprot:Q55979; Y712_SYNY3 HYPOTHETICAL 35.1 KD PROTEIN SLR0712; E=2e-23 gb:AAF20821.1; AF199025_2 (AF199025) LpiA [Sinorhizobium meliloti]; E=4e-17 gb:AAG55159.1; AE005259_10 (AE005259) orf, hypothetical protein; E=6e-14 COG: slr0712; COG0392 Predicted integral membrane protein; E=2e-24; hypothetical protein 1192471 1792031 RB2269 Rhodopirellula baltica SH 1 hypothetical protein NP_864838.1 1191509 R 243090 CDS NP_864839.1 32471845 1795625 complement(1192508..1193089) 1 NC_005027.1 hypothetical protein 1193089 1795625 RB2272 Rhodopirellula baltica SH 1 hypothetical protein NP_864839.1 1192508 R 243090 CDS NP_864840.1 32471846 1794419 complement(1192939..1193331) 1 NC_005027.1 hypothetical protein 1193331 1794419 RB2274 Rhodopirellula baltica SH 1 hypothetical protein NP_864840.1 1192939 R 243090 CDS NP_864841.1 32471847 1790619 complement(1193351..1193566) 1 NC_005027.1 hypothetical protein 1193566 1790619 RB2277 Rhodopirellula baltica SH 1 hypothetical protein NP_864841.1 1193351 R 243090 CDS NP_864842.1 32471848 1794666 1193534..1195039 1 NC_005027.1 PMID: 3481024 best DB hits: BLAST: gb:AAB82633.1; (AC002387) 5-enolpyruvylshikimate-3-phosphate; E=1e-73 pir:XUMUVS; 3-phosphoshikimate 1-carboxyvinyltransferase (EC; E=1e-72 swissprot:P05466; AROA_ARATH 3-PHOSPHOSHIKIMATE; E=1e-72 COG: VC1732; COG0128 5-enolpyruvylshikimate-3-phosphate synthase; E=2e-70 PFAM: PF00275; EPSP synthase (3-phosphoshikim; E=5.8e-128; 3-phosphoshikimate 1-carboxyvinyltransferase 1195039 1794666 RB2278 Rhodopirellula baltica SH 1 3-phosphoshikimate 1-carboxyvinyltransferase NP_864842.1 1193534 D 243090 CDS NP_864843.1 32471849 1790626 1195055..1195816 1 NC_005027.1 hypothetical protein 1195816 1790626 RB2279 Rhodopirellula baltica SH 1 hypothetical protein NP_864843.1 1195055 D 243090 CDS NP_864844.1 32471850 1791751 complement(1195824..1196060) 1 NC_005027.1 hypothetical protein 1196060 1791751 RB2280 Rhodopirellula baltica SH 1 hypothetical protein NP_864844.1 1195824 R 243090 CDS NP_864845.1 32471851 1795369 1196032..1196964 1 NC_005027.1 hypothetical protein 1196964 1795369 RB2281 Rhodopirellula baltica SH 1 hypothetical protein NP_864845.1 1196032 D 243090 CDS NP_864846.1 32471852 1792781 1196961..1197128 1 NC_005027.1 hypothetical protein 1197128 1792781 RB2282 Rhodopirellula baltica SH 1 hypothetical protein NP_864846.1 1196961 D 243090 CDS NP_864847.1 32471853 1793577 complement(1197102..1197719) 1 NC_005027.1 hypothetical protein 1197719 1793577 RB2283 Rhodopirellula baltica SH 1 hypothetical protein NP_864847.1 1197102 R 243090 CDS NP_864848.1 32471854 1793144 1197486..1198511 1 NC_005027.1 PMID: 10761919 best DB hits: BLAST: gb:AAC09305.1; (AF047044) transposase [Nostoc sp. PCC; E=2e-41 pir:A32816; hypothetical protein, 33K - Pseudomonas atlantica; E=7e-35 pir:B81886; probable transposase NMA1185 [imported] - Neisseria; E=1e-30 PFAM: PF01548; Transposase; E=2.2e-05 PF02371; Transposase IS116/IS110/IS902; E=1.3e-25; transposase 1198511 1793144 RB2284 Rhodopirellula baltica SH 1 transposase NP_864848.1 1197486 D 243090 CDS NP_864849.1 32471855 1791758 complement(1198829..1199020) 1 NC_005027.1 hypothetical protein 1199020 1791758 RB2287 Rhodopirellula baltica SH 1 hypothetical protein NP_864849.1 1198829 R 243090 CDS NP_864850.1 32471856 1793987 1198969..1199172 1 NC_005027.1 hypothetical protein 1199172 1793987 RB2288 Rhodopirellula baltica SH 1 hypothetical protein NP_864850.1 1198969 D 243090 CDS NP_864851.1 32471857 1793419 1199219..1199341 1 NC_005027.1 hypothetical protein 1199341 1793419 RB2290 Rhodopirellula baltica SH 1 hypothetical protein NP_864851.1 1199219 D 243090 CDS NP_864852.1 32471858 1795536 1199317..1200063 1 NC_005027.1 PMID: 9054507 best DB hits: BLAST: swissprot:P37522; SOJ_BACSU SPORULATION INITIATION INHIBITOR; E=8e-50 swissprot:Q9K5N0; SOJ_BACHD SPORULATION INITIATION INHIBITOR; E=6e-48 swissprot:O83296; SOJ_TREPA PROTEIN SOJ HOMOLOG ----- pir:; E=6e-48 COG: BS_soj; COG1192 ATPases involved in chromosome partitioning; E=8e-51 PFAM: PF00142; 4Fe-4S iron sulfur cluster bindin; E=0.00021 PF02374; Anion-transporting ATPase; E=0.013 PF00991; ParA family ATPase; E=4.9e-21; chromosome partitioning protein parA 1200063 parA 1795536 parA Rhodopirellula baltica SH 1 chromosome partitioning protein parA NP_864852.1 1199317 D 243090 CDS NP_864853.1 32471859 1795932 1200056..1201045 1 NC_005027.1 PMID: 9634230 best DB hits: BLAST: swissprot:O53595; PARB_MYCTU PROBABLE CHROMOSOME PARTITIONING; E=6e-38 swissprot:P31857; PARB_PSEPU PROBABLE CHROMOSOME PARTITIONING; E=3e-37 swissprot:Q50201; PARB_MYCLE PROBABLE CHROMOSOME PARTITIONING; E=3e-37 COG: Rv3917c; COG1475 Predicted transcriptional regulators; E=5e-39 PFAM: PF02195; ParB-like nuclease domain; E=4.8e-30 PF01381; Helix-turn-helix; E=0.3; chromosome partitioning protein parB 1201045 parB 1795932 parB Rhodopirellula baltica SH 1 chromosome partitioning protein parB NP_864853.1 1200056 D 243090 CDS NP_864854.1 32471860 1794062 complement(1201195..1201509) 1 NC_005027.1 hypothetical protein 1201509 1794062 RB2297 Rhodopirellula baltica SH 1 hypothetical protein NP_864854.1 1201195 R 243090 CDS NP_864855.1 32471861 1795734 complement(1201605..1202012) 1 NC_005027.1 hypothetical protein 1202012 1795734 RB2298 Rhodopirellula baltica SH 1 hypothetical protein NP_864855.1 1201605 R 243090 CDS NP_864856.1 32471862 1796614 1201943..1204336 1 NC_005027.1 PMID: 9634230 best DB hits: BLAST: pir:G71532; probable threoninetyrosine-specific protein kinase (EC; E=2e-31 gb:AAF73573.1; (AE002326) serinethreonine protein kinase; E=2e-31 pir:D83637; serinethreonine protein kinase PpkA PA0074 [imported] -; E=6e-28 COG: CT301_1; COG0515 Serine/threonine protein kinases; E=2e-32 PFAM: PF00069; Protein kinase domain; E=5.7e-13 PF00989; PAS domain; E=3.8e-06 PF00785; PAC motif; E=0.74; serine/threonine-protein kinase 1204336 1796614 RB2299 Rhodopirellula baltica SH 1 serine/threonine-protein kinase NP_864856.1 1201943 D 243090 CDS NP_864857.1 32471863 1794142 1204388..1204528 1 NC_005027.1 hypothetical protein 1204528 1794142 RB2302 Rhodopirellula baltica SH 1 hypothetical protein NP_864857.1 1204388 D 243090 CDS NP_864858.1 32471864 1794520 1204509..1205219 1 NC_005027.1 PMID: 8432708 best DB hits: BLAST: pir:C82583; RNA polymerase sigma-H factor XF2239 [imported] -; E=1e-19 pir:S77368; transcription initiation factor sigma E slr1545 -; E=2e-19 gb:AAD42769.1; AF121849_1 (AF121849) SigG [Synechococcus sp. PCC; E=7e-18 COG: XF2239; COG1595 DNA-directed RNA polymerase specialized sigma; E=1e-20 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=1.5e-18 PF00140; Sigma-70 factor; E=0.55; RNA polymerase sigma-H factor 1205219 rpsH 1794520 rpsH Rhodopirellula baltica SH 1 RNA polymerase sigma-H factor NP_864858.1 1204509 D 243090 CDS NP_864859.1 32471865 1793871 1205216..1206748 1 NC_005027.1 hypothetical protein 1206748 1793871 RB2304 Rhodopirellula baltica SH 1 hypothetical protein NP_864859.1 1205216 D 243090 CDS NP_864860.1 32471866 1795458 1206782..1206907 1 NC_005027.1 hypothetical protein 1206907 1795458 RB2306 Rhodopirellula baltica SH 1 hypothetical protein NP_864860.1 1206782 D 243090 CDS NP_864861.1 32471867 1794179 1206969..1208933 1 NC_005027.1 signal peptide 1208933 1794179 RB2308 Rhodopirellula baltica SH 1 signal peptide NP_864861.1 1206969 D 243090 CDS NP_864862.1 32471868 1793999 complement(1209222..1209545) 1 NC_005027.1 hypothetical protein 1209545 1793999 RB2310 Rhodopirellula baltica SH 1 hypothetical protein NP_864862.1 1209222 R 243090 CDS NP_864863.1 32471869 1792436 complement(1209542..1209682) 1 NC_005027.1 hypothetical protein 1209682 1792436 RB2312 Rhodopirellula baltica SH 1 hypothetical protein NP_864863.1 1209542 R 243090 CDS NP_864864.1 32471870 1790634 1209644..1209892 1 NC_005027.1 hypothetical protein 1209892 1790634 RB2314 Rhodopirellula baltica SH 1 hypothetical protein NP_864864.1 1209644 D 243090 CDS NP_864865.1 32471871 1796669 complement(1210048..1210587) 1 NC_005027.1 signal peptide 1210587 1796669 RB2316 Rhodopirellula baltica SH 1 signal peptide NP_864865.1 1210048 R 243090 CDS NP_864866.1 32471872 1795292 complement(1210643..1211131) 1 NC_005027.1 hypothetical protein 1211131 1795292 RB2317 Rhodopirellula baltica SH 1 hypothetical protein NP_864866.1 1210643 R 243090 CDS NP_864867.1 32471873 1795274 1211152..1211427 1 NC_005027.1 hypothetical protein 1211427 1795274 RB2319 Rhodopirellula baltica SH 1 hypothetical protein NP_864867.1 1211152 D 243090 CDS NP_864868.1 32471874 1793893 complement(1211269..1211568) 1 NC_005027.1 hypothetical protein 1211568 1793893 RB2320 Rhodopirellula baltica SH 1 hypothetical protein NP_864868.1 1211269 R 243090 CDS NP_864869.1 32471875 1793358 complement(1211620..1212345) 1 NC_005027.1 hypothetical protein 1212345 1793358 RB2321 Rhodopirellula baltica SH 1 hypothetical protein NP_864869.1 1211620 R 243090 CDS NP_864870.1 32471876 1793040 complement(1212437..1212778) 1 NC_005027.1 hypothetical protein 1212778 1793040 RB2326 Rhodopirellula baltica SH 1 hypothetical protein NP_864870.1 1212437 R 243090 CDS NP_864871.1 32471877 1794683 1212750..1212875 1 NC_005027.1 hypothetical protein 1212875 1794683 RB2327 Rhodopirellula baltica SH 1 hypothetical protein NP_864871.1 1212750 D 243090 CDS NP_864872.1 32471878 1792333 complement(1213057..1213398) 1 NC_005027.1 hypothetical protein 1213398 1792333 RB2328 Rhodopirellula baltica SH 1 hypothetical protein NP_864872.1 1213057 R 243090 CDS NP_864873.1 32471879 1791300 complement(1213386..1213925) 1 NC_005027.1 signal peptide 1213925 1791300 RB2329 Rhodopirellula baltica SH 1 signal peptide NP_864873.1 1213386 R 243090 CDS NP_864874.1 32471880 1796345 complement(1214014..1214565) 1 NC_005027.1 hypothetical protein 1214565 1796345 RB2330 Rhodopirellula baltica SH 1 hypothetical protein NP_864874.1 1214014 R 243090 CDS NP_864875.1 32471881 1790209 complement(1214687..1215088) 1 NC_005027.1 hypothetical protein 1215088 1790209 RB2331 Rhodopirellula baltica SH 1 hypothetical protein NP_864875.1 1214687 R 243090 CDS NP_864876.1 32471882 1792691 complement(1215181..1215450) 1 NC_005027.1 hypothetical protein 1215450 1792691 RB2334 Rhodopirellula baltica SH 1 hypothetical protein NP_864876.1 1215181 R 243090 CDS NP_864877.1 32471883 1790518 1215464..1215610 1 NC_005027.1 hypothetical protein 1215610 1790518 RB2335 Rhodopirellula baltica SH 1 hypothetical protein NP_864877.1 1215464 D 243090 CDS NP_864878.1 32471884 1795860 complement(1215693..1215929) 1 NC_005027.1 hypothetical protein 1215929 1795860 RB2336 Rhodopirellula baltica SH 1 hypothetical protein NP_864878.1 1215693 R 243090 CDS NP_864879.1 32471885 1796510 complement(1216113..1216652) 1 NC_005027.1 hypothetical protein 1216652 1796510 RB2337 Rhodopirellula baltica SH 1 hypothetical protein NP_864879.1 1216113 R 243090 CDS NP_864880.1 32471886 1794263 1216797..1216943 1 NC_005027.1 hypothetical protein 1216943 1794263 RB2338 Rhodopirellula baltica SH 1 hypothetical protein NP_864880.1 1216797 D 243090 CDS NP_864881.1 32471887 1793439 complement(1217004..1217573) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:D75339; hypothetical protein - Deinococcus radiodurans (strain; E=9e-22; hypothetical protein 1217573 1793439 RB2339 Rhodopirellula baltica SH 1 hypothetical protein NP_864881.1 1217004 R 243090 CDS NP_864882.1 32471888 1793642 complement(1217548..1217679) 1 NC_005027.1 hypothetical protein 1217679 1793642 RB2340 Rhodopirellula baltica SH 1 hypothetical protein NP_864882.1 1217548 R 243090 CDS NP_864883.1 32471889 1795030 complement(1217720..1217932) 1 NC_005027.1 signal peptide 1217932 1795030 RB2341 Rhodopirellula baltica SH 1 signal peptide NP_864883.1 1217720 R 243090 CDS NP_864884.1 32471890 1792664 1217901..1218119 1 NC_005027.1 hypothetical protein 1218119 1792664 RB2342 Rhodopirellula baltica SH 1 hypothetical protein NP_864884.1 1217901 D 243090 CDS NP_864885.1 32471891 1795051 complement(1218233..1218667) 1 NC_005027.1 signal peptide 1218667 1795051 RB2343 Rhodopirellula baltica SH 1 signal peptide NP_864885.1 1218233 R 243090 CDS NP_864886.1 32471892 1793014 1218661..1218927 1 NC_005027.1 hypothetical protein 1218927 1793014 RB2344 Rhodopirellula baltica SH 1 hypothetical protein NP_864886.1 1218661 D 243090 CDS NP_864887.1 32471893 1794128 complement(1218758..1218946) 1 NC_005027.1 hypothetical protein 1218946 1794128 RB2345 Rhodopirellula baltica SH 1 hypothetical protein NP_864887.1 1218758 R 243090 CDS NP_864888.1 32471894 1790177 complement(1218937..1219605) 1 NC_005027.1 hypothetical protein 1219605 1790177 RB2346 Rhodopirellula baltica SH 1 hypothetical protein NP_864888.1 1218937 R 243090 CDS NP_864889.1 32471895 1796030 complement(1219602..1220855) 1 NC_005027.1 hypothetical protein 1220855 1796030 RB2349 Rhodopirellula baltica SH 1 hypothetical protein NP_864889.1 1219602 R 243090 CDS NP_864890.1 32471896 1795741 1220890..1221003 1 NC_005027.1 hypothetical protein 1221003 1795741 RB2350 Rhodopirellula baltica SH 1 hypothetical protein NP_864890.1 1220890 D 243090 CDS NP_864891.1 32471897 1792484 1220991..1221392 1 NC_005027.1 hypothetical protein 1221392 1792484 RB2351 Rhodopirellula baltica SH 1 hypothetical protein NP_864891.1 1220991 D 243090 CDS NP_864892.1 32471898 1791279 complement(1221322..1221696) 1 NC_005027.1 signal peptide 1221696 1791279 RB2353 Rhodopirellula baltica SH 1 signal peptide NP_864892.1 1221322 R 243090 CDS NP_864893.1 32471899 1791384 complement(1221808..1222320) 1 NC_005027.1 PMID: 8682784 best DB hits: BLAST: ddbj:BAB05587.1; (AP001513) BH1868~unknown conserved protein; E=7e-20 pir:T30571; hypothetical protein - Bacillus megaterium -----; E=3e-16 swissprot:P49855; YKKB_BACSU HYPOTHETICAL 20.1 KD PROTEIN IN; E=6e-16 COG: BH1868; COG1670 Acetyltransferases, including N-acetylases of; E=7e-21 PFAM: PF00583; Acetyltransferase (GNAT) family; E=6.3e-12; acetyltransferase 1222320 1791384 RB2355 Rhodopirellula baltica SH 1 acetyltransferase NP_864893.1 1221808 R 243090 CDS NP_864894.1 32471900 1790008 complement(1222268..1222534) 1 NC_005027.1 hypothetical protein 1222534 1790008 RB2357 Rhodopirellula baltica SH 1 hypothetical protein NP_864894.1 1222268 R 243090 CDS NP_864895.1 32471901 1790554 1222494..1222691 1 NC_005027.1 hypothetical protein 1222691 1790554 RB2358 Rhodopirellula baltica SH 1 hypothetical protein NP_864895.1 1222494 D 243090 CDS NP_864896.1 32471902 1790807 complement(1222688..1222876) 1 NC_005027.1 hypothetical protein 1222876 1790807 RB2359 Rhodopirellula baltica SH 1 hypothetical protein NP_864896.1 1222688 R 243090 CDS NP_864897.1 32471903 1796314 complement(1223001..1223153) 1 NC_005027.1 hypothetical protein 1223153 1796314 RB2360 Rhodopirellula baltica SH 1 hypothetical protein NP_864897.1 1223001 R 243090 CDS NP_864898.1 32471904 1789982 1223128..1223244 1 NC_005027.1 hypothetical protein 1223244 1789982 RB2361 Rhodopirellula baltica SH 1 hypothetical protein NP_864898.1 1223128 D 243090 CDS NP_864899.1 32471905 1794149 complement(1223386..1223646) 1 NC_005027.1 hypothetical protein 1223646 1794149 RB2362 Rhodopirellula baltica SH 1 hypothetical protein NP_864899.1 1223386 R 243090 CDS NP_864900.1 32471906 1795021 1223863..1224651 1 NC_005027.1 PMID: 12004073 best DB hits: BLAST: pir:A72359; conserved hypothetical protein - Thermotoga maritima; E=0.033 gb:AAA02747.1; (L13655) membrane protein [Saccharum hybrid; E=0.055 gb:AAF88090.1; AC025417_18 (AC025417) T12C24.28 [Arabidopsis; E=0.057 COG: TM0584; COG0705 Uncharacterized membrane protein (homolog of; E=0.003 PFAM: PF01694; Rhomboid family; E=3.4e-07; hypothetical protein 1224651 1795021 RB2364 Rhodopirellula baltica SH 1 hypothetical protein NP_864900.1 1223863 D 243090 CDS NP_864901.1 32471907 1795066 1224623..1226167 1 NC_005027.1 hypothetical protein 1226167 1795066 RB2365 Rhodopirellula baltica SH 1 hypothetical protein NP_864901.1 1224623 D 243090 CDS NP_864902.1 32471908 1793761 complement(1226195..1228564) 1 NC_005027.1 best DB hits: BLAST: pir:B70535; probable sulfatase (EC 3.1.6.-) atsD - Mycobacterium; E=0.0 pir:E70533; probable sulfatase (EC 3.1.6.-) atsB - Mycobacterium; E=1e-160 pir:B70643; probable sulfatase (EC 3.1.6.-) atsA - Mycobacterium; E=1e-137 COG: Rv0663; COG3119 Arylsulfatase A and related enzymes; E=0.0 PFAM: PF00884; Sulfatase; E=2e-129; sulfatase atsD 1228564 1793761 RB2367 Rhodopirellula baltica SH 1 sulfatase atsD NP_864902.1 1226195 R 243090 CDS NP_864903.1 32471909 1792672 complement(1228604..1229008) 1 NC_005027.1 hypothetical protein 1229008 1792672 RB2369 Rhodopirellula baltica SH 1 hypothetical protein NP_864903.1 1228604 R 243090 CDS NP_864904.1 32471910 1795771 complement(1229023..1229187) 1 NC_005027.1 hypothetical protein 1229187 1795771 RB2370 Rhodopirellula baltica SH 1 hypothetical protein NP_864904.1 1229023 R 243090 CDS NP_864905.1 32471911 1795871 complement(1229165..1229797) 1 NC_005027.1 hypothetical protein 1229797 1795871 RB2371 Rhodopirellula baltica SH 1 hypothetical protein NP_864905.1 1229165 R 243090 CDS NP_864906.1 32471912 1794638 1229953..1230129 1 NC_005027.1 hypothetical protein 1230129 1794638 RB2372 Rhodopirellula baltica SH 1 hypothetical protein NP_864906.1 1229953 D 243090 CDS NP_864907.1 32471913 1796367 complement(1230126..1231334) 1 NC_005027.1 PMID: 8169197 best DB hits: BLAST: pir:F70090; probable formaldehyde dehydrogenase (EC 1.2.1.46) yycR -; E=1e-151 swissprot:P46154; FADH_PSEPU GLUTATHIONE-INDEPENDENT FORMALDEHYDE; E=1e-140 pir:E82969; glutathione-independent formaldehyde dehydrogenase; E=1e-138 COG: BS_yycR; COG1063 Threonine dehydrogenase and related Zn-dependent; E=1e-152 PFAM: PF01262; Alanine dehydrogenase/pyridine nucl; E=0.17 PF00107; Zinc-binding dehydrogenases; E=3.1e-48; formaldehyde dehydrogenase 1231334 fdh 1796367 fdh Rhodopirellula baltica SH 1 formaldehyde dehydrogenase NP_864907.1 1230126 R 243090 CDS NP_864908.1 32471914 1794123 1231392..1231505 1 NC_005027.1 hypothetical protein 1231505 1794123 RB2374 Rhodopirellula baltica SH 1 hypothetical protein NP_864908.1 1231392 D 243090 CDS NP_864909.1 32471915 1790575 1231493..1231948 1 NC_005027.1 hypothetical protein 1231948 1790575 RB2375 Rhodopirellula baltica SH 1 hypothetical protein NP_864909.1 1231493 D 243090 CDS NP_864910.1 32471916 1793801 1231979..1236811 1 NC_005027.1 PMID: 7744061 best DB hits: BLAST: swissprot:P51691; ARS_PSEAE ARYLSULFATASE (ARYL-SULFATE; E=9e-73 pir:S69336; arylsulfatase (EC 3.1.6.1) - Pseudomonas aeruginosa; E=4e-71 pir:T45548; arylsulfatase (EC 3.1.6.1) [validated] - Klebsiella; E=2e-63 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=8e-74 PFAM: PF00884; Sulfatase; E=5.5e-93; arylsulfatase 1236811 atsA 1793801 atsA Rhodopirellula baltica SH 1 arylsulfatase NP_864910.1 1231979 D 243090 CDS NP_864911.1 32471917 1790087 1236812..1237018 1 NC_005027.1 hypothetical protein 1237018 1790087 RB2378 Rhodopirellula baltica SH 1 hypothetical protein NP_864911.1 1236812 D 243090 CDS NP_864912.1 32471918 1796624 complement(1236816..1237034) 1 NC_005027.1 hypothetical protein 1237034 1796624 RB2379 Rhodopirellula baltica SH 1 hypothetical protein NP_864912.1 1236816 R 243090 CDS NP_864913.1 32471919 1791565 complement(1236988..1238832) 1 NC_005027.1 PMID: 99242786 best DB hits: BLAST: gb:AAD30205.1; (AF094824) IbeB [Escherichia coli]; E=3e-33 swissprot:P77211; IBEB_ECOLI PROBABLE OUTER MEMBRANE LIPOPROTEIN; E=4e-33 gb:AAG54905.1; AE005237_1 (AE005237) resistance protein; E=1e-32 COG: ylcB; COG1538 Outer membrane protein; E=4e-34 PFAM: PF02321; Outer membrane efflux protein; E=1.3e-09; outer membrane lipoprotein IbeB 1238832 ibeB 1791565 ibeB Rhodopirellula baltica SH 1 outer membrane lipoprotein IbeB NP_864913.1 1236988 R 243090 CDS NP_864914.1 32471920 1794002 1238921..1239148 1 NC_005027.1 hypothetical protein 1239148 1794002 RB2382 Rhodopirellula baltica SH 1 hypothetical protein NP_864914.1 1238921 D 243090 CDS NP_864915.1 32471921 1793603 complement(1239120..1242554) 1 NC_005027.1 PMID: 7968531 PMID: 10187844 PMID: 10984043 best DB hits: BLAST: pir:H83071; RND multidrug efflux transporter MexD PA4598 [imported]; E=7e-91 embl:CAC14595.1; (AJ252200) RND protein; E=2e-85 swissprot:P52002; MEXB_PSEAE MULTIDRUG RESISTANCE PROTEIN MEXB; E=6e-85 COG: PA4598; COG0841 Cation/multidrug efflux pump; E=7e-92 PFAM: PF00873; AcrB/AcrD/AcrF family; E=7.9e-188; multidrug resistance protein MexB 1242554 mexB 1793603 mexB Rhodopirellula baltica SH 1 multidrug resistance protein MexB NP_864915.1 1239120 R 243090 CDS NP_864916.1 32471922 1795755 complement(1242500..1242697) 1 NC_005027.1 hypothetical protein 1242697 1795755 RB2384 Rhodopirellula baltica SH 1 hypothetical protein NP_864916.1 1242500 R 243090 CDS NP_864917.1 32471923 1790521 complement(1242734..1244320) 1 NC_005027.1 PMID: 7968531 best DB hits: BLAST: gb:AAD12178.1; (AF029405) periplasmic linker protein [Pseudomonas; E=8e-20 swissprot:P37636; YHIU_ECOLI HYPOTHETICAL 41.2 KD LIPOPROTEIN IN; E=3e-19 gb:AAG58654.1; AE005576_13 (AE005576) membrane protein; E=4e-19 COG: yhiU; COG0845 Membrane-fusion protein; E=3e-20 PFAM: PF00364; Biotin-requiring enzyme; E=0.0015 PF00529; HlyD family secretion protein; E=3.1e-06; multidrug resistance protein MexA 1244320 mexA 1790521 mexA Rhodopirellula baltica SH 1 multidrug resistance protein MexA NP_864917.1 1242734 R 243090 CDS NP_864918.1 32471924 1794194 complement(1244298..1244843) 1 NC_005027.1 hypothetical protein 1244843 1794194 RB2391 Rhodopirellula baltica SH 1 hypothetical protein NP_864918.1 1244298 R 243090 CDS NP_864919.1 32471925 1791596 complement(1244920..1245630) 1 NC_005027.1 PMID: 9679194 best DB hits: BLAST: swissprot:O58988; KCY_PYRHO CYTIDYLATE KINASE (CK) (CYTIDINE; E=1e-04 swissprot:Q58071; KCY_METJA CYTIDYLATE KINASE (CK) (CYTIDINE; E=0.005 swissprot:O05982; KCY_SULAC CYTIDYLATE KINASE (CK) (CYTIDINE; E=0.005 COG: PH1265; COG1102 Cytidylate kinase 2; E=1e-05; cytidylate kinase 1245630 1791596 RB2394 Rhodopirellula baltica SH 1 cytidylate kinase NP_864919.1 1244920 R 243090 CDS NP_864920.1 32471926 1791310 1245553..1246050 1 NC_005027.1 hypothetical protein 1246050 1791310 RB2395 Rhodopirellula baltica SH 1 hypothetical protein NP_864920.1 1245553 D 243090 CDS NP_864921.1 32471927 1796990 1246032..1247489 1 NC_005027.1 PMID: 9278503 PMID: 9097040 PMID: 8346225 best DB hits: BLAST: swissprot:Q06065; ATOC_ECOLI ACETOACETATE METABOLISM REGULATORY; E=4e-87 gb:AAG45333.1; AF273214_1 (AF273214) SasR [Myxococcus xanthus]; E=2e-85 swissprot:P14375; HYDG_ECOLI transcriptional regulator; E=1e-81 COG: atoC; COG2204 AAA superfamily ATPases with N-terminal receiver; E=4e-88 PFAM: PF00072; Response regulator receiver doma; E=6.6e-32 PF00004; ATPase associated with va; E=0.008 PF00158; Sigma-54 interaction domain; E=9.4e-122; acetoacetate metabolism regulatory protein 1247489 atoC 1796990 atoC Rhodopirellula baltica SH 1 acetoacetate metabolism regulatory protein NP_864921.1 1246032 D 243090 CDS NP_864922.1 32471928 1793541 complement(1247520..1248404) 1 NC_005027.1 hypothetical protein 1248404 1793541 RB2398 Rhodopirellula baltica SH 1 hypothetical protein NP_864922.1 1247520 R 243090 CDS NP_864923.1 32471929 1796250 1248366..1248524 1 NC_005027.1 hypothetical protein 1248524 1796250 RB2399 Rhodopirellula baltica SH 1 hypothetical protein NP_864923.1 1248366 D 243090 CDS NP_864924.1 32471930 1793626 complement(1248499..1248699) 1 NC_005027.1 hypothetical protein 1248699 1793626 RB2400 Rhodopirellula baltica SH 1 hypothetical protein NP_864924.1 1248499 R 243090 CDS NP_864925.1 32471931 1795272 1248679..1250799 1 NC_005027.1 PMID: 7744081 best DB hits: BLAST: swissprot:P49053; PRXC_CURIN VANADIUM CHLOROPEROXIDASE (VCPO); E=2e-25 pdb:1VNS; Recombinant Apo-Chloroperoxidase From Curvularia; E=2e-25 pdb:1VNF; Chloroperoxidase From The Fungus Curvularia; E=1e-24 PFAM: PF00404; Dockerin type I repeat; E=0.4 PF02328; Vanadium chloroperoxidase; E=1.5e-20; vanadium chloroperoxidase 1250799 cpo 1795272 cpo Rhodopirellula baltica SH 1 vanadium chloroperoxidase NP_864925.1 1248679 D 243090 CDS NP_864926.1 32471932 1792362 complement(1250881..1252389) 1 NC_005027.1 PMID: 7610040 best DB hits: BLAST: pir:D83353; mannitol dehydrogenase PA2342 [imported] - Pseudomonas; E=1e-116 gb:AAC04472.1; (AF007800) mannitol dehydrogenase [Pseudomonas; E=1e-111 embl:CAA96356.1; (Z71688) ORF YNR073c [Saccharomyces cerevisiae]; E=1e-102 COG: PA2342; COG0246 Mannitol-1-phosphate/altronate dehydrogenases; E=1e-117 PFAM: PF01232; Mannitol dehydrogenase; E=9.3e-176; D-mannonate oxidoreductase 1252389 uxuB 1792362 uxuB Rhodopirellula baltica SH 1 D-mannonate oxidoreductase NP_864926.1 1250881 R 243090 CDS NP_864927.1 32471933 1795312 complement(1252408..1254135) 1 NC_005027.1 PMID: 10086841; hypothetical protein 1254135 1795312 RB2404 Rhodopirellula baltica SH 1 hypothetical protein NP_864927.1 1252408 R 243090 CDS NP_864928.1 32471934 1791221 1254300..1255103 1 NC_005027.1 PMID: 9687406 best DB hits: BLAST: embl:CAB61226.1; (Y17305) hypothetical protein [Bacillus; E=2e-15 swissprot:P43965; YAFM_HAEIN HYPOTHETICAL PROTEIN HI0217 -----; E=4e-04 pir:E81971; hypothetical protein NMA0532 [imported] - Neisseria; E=4e-04 COG: HI0217; COG1943 Predicted transposase; E=3e-05 PFAM: PF00637; 7-fold repeat in Clathrin and; E=0.77 PF02178; AT hook motif; E=0.72; hypothetical protein 1255103 1791221 RB2408 Rhodopirellula baltica SH 1 hypothetical protein NP_864928.1 1254300 D 243090 CDS NP_864929.1 32471935 1792110 1255432..1256535 1 NC_005027.1 signal peptide 1256535 1792110 RB2412 Rhodopirellula baltica SH 1 signal peptide NP_864929.1 1255432 D 243090 CDS NP_864930.1 32471936 1793680 1256570..1256716 1 NC_005027.1 hypothetical protein 1256716 1793680 RB2414 Rhodopirellula baltica SH 1 hypothetical protein NP_864930.1 1256570 D 243090 CDS NP_864931.1 32471937 1793359 1256739..1256849 1 NC_005027.1 hypothetical protein 1256849 1793359 RB2415 Rhodopirellula baltica SH 1 hypothetical protein NP_864931.1 1256739 D 243090 CDS NP_864932.1 32471938 1791952 complement(1257029..1258198) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:A75496; conserved hypothetical protein - Deinococcus radiodurans; E=2e-04 pir:C71139; hypothetical protein PH0326 - Pyrococcus horikoshii; E=2e-04 pir:A72430; hypothetical protein - Thermotoga maritima (strain MSB8); E=0.002 COG: DR0620_2; COG1305 transglutaminases, cysteine; E=1e-05 PFAM: PF01841; Transglutaminase-like superfam; E=0.014; transglutaminase 1258198 1791952 RB2416 Rhodopirellula baltica SH 1 transglutaminase NP_864932.1 1257029 R 243090 CDS NP_864933.1 32471939 1791552 complement(1258302..1258877) 1 NC_005027.1 signal peptide 1258877 1791552 RB2418 Rhodopirellula baltica SH 1 signal peptide NP_864933.1 1258302 R 243090 CDS NP_864934.1 32471940 1790328 1258838..1260481 1 NC_005027.1 best DB hits: BLAST: gb:AAD50452.1; AF170704_2 (AF170704) SpcB [Streptomyces; E=1e-04 gb:AAF63338.1; AF244574_1 (AF244574) myo-inositol-2-dehydrogenase; E=3e-04 gb:AAD13550.1; (AF080235) oxidoreductase homolog [Streptomyces; E=0.001 COG: BH0710; COG0673 Predicted dehydrogenases and related proteins; E=2e-04 PFAM: PF01408; Oxidoreductase, NAD-bind; E=5.8e-11; myo-inositol-2-dehydrogenase 1260481 1790328 RB2420 Rhodopirellula baltica SH 1 myo-inositol-2-dehydrogenase NP_864934.1 1258838 D 243090 CDS NP_864935.1 32471941 1792660 1260478..1260759 1 NC_005027.1 hypothetical protein 1260759 1792660 RB2424 Rhodopirellula baltica SH 1 hypothetical protein NP_864935.1 1260478 D 243090 CDS NP_864936.1 32471942 1797116 1260766..1261074 1 NC_005027.1 hypothetical protein 1261074 1797116 RB2425 Rhodopirellula baltica SH 1 hypothetical protein NP_864936.1 1260766 D 243090 CDS NP_864937.1 32471943 1794996 complement(1261010..1262740) 1 NC_005027.1 PMID: 8905232 best DB hits: BLAST: swissprot:P77381; YBES_ECOLI HYPOTHETICAL 55.3 KDA PROTEIN IN; E=0.093 gb:AAG54981.1; AE005243_10 (AE005243) enzyme of; E=0.31 gb:AAG53090.1; (AF284647) phosphoprotein [Newcastle disease; E=0.67; hypothetical protein 1262740 1794996 RB2426 Rhodopirellula baltica SH 1 hypothetical protein NP_864937.1 1261010 R 243090 CDS NP_864938.1 32471944 1793059 complement(1262854..1263540) 1 NC_005027.1 hypothetical protein 1263540 1793059 RB2428 Rhodopirellula baltica SH 1 hypothetical protein NP_864938.1 1262854 R 243090 CDS NP_864939.1 32471945 1792136 complement(1263537..1265300) 1 NC_005027.1 PMID: 9735342 best DB hits: BLAST: swissprot:P77319; HSCC_ECOLI CHAPERONE PROTEIN HSCC (HSC62); E=1e-92 gb:AAG54984.1; AE005244_2 (AE005244) dnaK protein; E=3e-91 embl:CAA06391.1; (AJ005129) dnaK [Thermotoga maritima]; E=3e-88 COG: ybeW; COG0443 Molecular chaperone; E=1e-93 PFAM: PF01869; BadF/BadG/BcrA/BcrD ATPase fa; E=0.37 PF00012; Hsp70 protein; E=9.1e-147; chaperone protein HscC 1265300 dnaK 1792136 dnaK Rhodopirellula baltica SH 1 chaperone protein HscC NP_864939.1 1263537 R 243090 CDS NP_864940.1 32471946 1796882 complement(1265293..1265493) 1 NC_005027.1 hypothetical protein 1265493 1796882 RB2431 Rhodopirellula baltica SH 1 hypothetical protein NP_864940.1 1265293 R 243090 CDS NP_864941.1 32471947 1795478 1265557..1266390 1 NC_005027.1 best DB hits: BLAST: gb:AAD20116.1; (AC006201) unknown protein [Arabidopsis thaliana]; E=0.030 pir:T16263; hypothetical protein F35D11.3 - Caenorhabditis elegans; E=0.096 pir:T39047; hypothetical protein SPAC6F6.13c - fission yeast; E=0.12; hypothetical protein 1266390 1795478 RB2432 Rhodopirellula baltica SH 1 hypothetical protein NP_864941.1 1265557 D 243090 CDS NP_864942.1 32471948 1794835 complement(1266402..1266647) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:H75402; conserved hypothetical protein - Deinococcus radiodurans; E=7e-12 pir:E82441; conserved hypothetical protein VCA0582 [imported] -; E=2e-05 pir:C81983; hypothetical protein NMA0633 [imported] - Neisseria; E=2e-04 COG: DR1391; COG2501 Uncharacterized ACR; E=7e-13 PFAM: PF01479; S4 domain; E=2.8e-06; RNA-binding protein 1266647 1794835 RB2434 Rhodopirellula baltica SH 1 RNA-binding protein NP_864942.1 1266402 R 243090 CDS NP_864943.1 32471949 1794038 complement(1266644..1267720) 1 NC_005027.1 best DB hits: BLAST: pir:T45676; hypothetical protein F14P22.150 - Arabidopsis thaliana; E=0.043 PFAM: PF02455; Hexon-associated protein (III; E=0.046; hypothetical protein 1267720 1794038 RB2435 Rhodopirellula baltica SH 1 hypothetical protein NP_864943.1 1266644 R 243090 CDS NP_864944.1 32471950 1794845 complement(1267766..1268971) 1 NC_005027.1 hypothetical protein 1268971 1794845 RB2436 Rhodopirellula baltica SH 1 hypothetical protein NP_864944.1 1267766 R 243090 CDS NP_864945.1 32471951 1796423 complement(1269211..1273044) 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:A58519; hypothetical 345 protein - Streptomyces coelicolor; E=2e-15 pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=1e-14 pir:T17478; hypothetical protein PCZA361.11 - Amycolatopsis orientalis; E=2e-14 COG: PA1112; COG2133 Glucose/sorbosone dehydrogenases; E=7e-13 PFAM: PF00138; Legume lectins alpha domain; E=0.059; glucosesorbosone dehydrogenase 1273044 1796423 RB2440 Rhodopirellula baltica SH 1 glucosesorbosone dehydrogenase NP_864945.1 1269211 R 243090 CDS NP_864946.1 32471952 1796495 complement(1273297..1276449) 1 NC_005027.1 best DB hits: PFAM: PF00404; Dockerin type I repeat; E=0.0038; hypothetical protein 1276449 1796495 RB2442 Rhodopirellula baltica SH 1 hypothetical protein NP_864946.1 1273297 R 243090 CDS NP_864947.1 32471953 1795113 complement(1276508..1276789) 1 NC_005027.1 hypothetical protein 1276789 1795113 RB2447 Rhodopirellula baltica SH 1 hypothetical protein NP_864947.1 1276508 R 243090 CDS NP_864948.1 32471954 1793543 1276780..1278513 1 NC_005027.1 signal peptide 1278513 1793543 RB2448 Rhodopirellula baltica SH 1 signal peptide NP_864948.1 1276780 D 243090 CDS NP_864949.1 32471955 1795167 1278610..1278882 1 NC_005027.1 hypothetical protein 1278882 1795167 RB2451 Rhodopirellula baltica SH 1 hypothetical protein NP_864949.1 1278610 D 243090 CDS NP_864950.1 32471956 1797063 1278899..1279582 1 NC_005027.1 signal peptide 1279582 1797063 RB2454 Rhodopirellula baltica SH 1 signal peptide NP_864950.1 1278899 D 243090 CDS NP_864951.1 32471957 1794485 1279589..1279705 1 NC_005027.1 signal peptide 1279705 1794485 RB2456 Rhodopirellula baltica SH 1 signal peptide NP_864951.1 1279589 D 243090 CDS NP_864952.1 32471958 1796921 1279788..1280144 1 NC_005027.1 hypothetical protein 1280144 1796921 RB2457 Rhodopirellula baltica SH 1 hypothetical protein NP_864952.1 1279788 D 243090 CDS NP_864953.1 32471959 1790844 complement(1280204..1280452) 1 NC_005027.1 hypothetical protein 1280452 1790844 RB2459 Rhodopirellula baltica SH 1 hypothetical protein NP_864953.1 1280204 R 243090 CDS NP_864954.1 32471960 1793704 complement(1280449..1281942) 1 NC_005027.1 best DB hits: BLAST: pir:B69196; conserved hypothetical protein MTH72 - Methanobacterium; E=0.51 pir:T31314; hypothetical protein 2 - Cenarchaeum symbiosum -----; E=0.64 gb:AAB63645.1; (AC001645) DNA binding protein (CDC27SH) isolog; E=0.66 PFAM: PF00515; TPR Domain; E=0.017; hypothetical protein 1281942 1793704 RB2460 Rhodopirellula baltica SH 1 hypothetical protein NP_864954.1 1280449 R 243090 CDS NP_864955.1 32471961 1791698 complement(1281939..1283837) 1 NC_005027.1 hypothetical protein 1283837 1791698 RB2461 Rhodopirellula baltica SH 1 hypothetical protein NP_864955.1 1281939 R 243090 CDS NP_864956.1 32471962 1795565 1283825..1284007 1 NC_005027.1 best DB hits: BLAST: gb:AAF47944.1; (AE003482) CG13708 gene product [Drosophila; E=0.70; hypothetical protein 1284007 1795565 RB2462 Rhodopirellula baltica SH 1 hypothetical protein NP_864956.1 1283825 D 243090 CDS NP_864957.1 32471963 1794981 1284165..1284404 1 NC_005027.1 hypothetical protein 1284404 1794981 RB2463 Rhodopirellula baltica SH 1 hypothetical protein NP_864957.1 1284165 D 243090 CDS NP_864958.1 32471964 1796691 complement(1284692..1287262) 1 NC_005027.1 PMID: 7476194 best DB hits: BLAST: pir:G70066; capsular polysaccharide biosynthesis homolog ywqD -; E=2e-28 swissprot:Q45409; EPSB_BURSO EPS I POLYSACCHARIDE EXPORT PROTEIN; E=2e-28 pir:G82262; probable exopolysaccharide biosynthesis protein VC0937; E=8e-28 COG: BS_ywqD; COG0489 ATPases involved in chromosome partitioning; E=2e-29 VNG0946G; COG0455 ATPases involved in chromosome partitioning; E=3e-08 BH3027; COG2894 Septum formation inhibitor-activating ATPase; E=6e-08 PFAM: PF00142; 4Fe-4S iron sulfur cluster bindin; E=0.016 PF00991; ParA family ATPase; E=0.3; capsular polysaccharide biosynthesis-like protein 1287262 epsB 1796691 epsB Rhodopirellula baltica SH 1 capsular polysaccharide biosynthesis-like protein NP_864958.1 1284692 R 243090 CDS NP_864959.1 32471965 1796278 1287232..1287390 1 NC_005027.1 hypothetical protein 1287390 1796278 RB2465 Rhodopirellula baltica SH 1 hypothetical protein NP_864959.1 1287232 D 243090 CDS NP_864960.1 32471966 1794502 complement(1287335..1287487) 1 NC_005027.1 hypothetical protein 1287487 1794502 RB2466 Rhodopirellula baltica SH 1 hypothetical protein NP_864960.1 1287335 R 243090 CDS NP_864961.1 32471967 1790137 1287454..1287654 1 NC_005027.1 hypothetical protein 1287654 1790137 RB2467 Rhodopirellula baltica SH 1 hypothetical protein NP_864961.1 1287454 D 243090 CDS NP_864962.1 32471968 1792762 complement(1288021..1288788) 1 NC_005027.1 PMID: 10931327 best DB hits: BLAST: embl:CAB63303.1; (AJ251712) glycosyltransferase-like protein; E=1e-47 embl:CAB63284.1; (AJ251713) glycosyltransferase-like protein; E=2e-47 gb:AAD47916.1; AF127522_3 (AF127522) ; E=1e-39 COG: jhp0094; COG0463 Glycosyltransferases involved in cell wall; E=6e-32 RP339; COG0463 Glycosyltransferases involved in cell wall biogenesis; E=4e-04 PAB1314; COG1215 Glycosyltransferases, probably involved in cell; E=8e-04 PFAM: PF00535; Glycosyl transferase; E=1.9e-28; glycosyltransferase-like protein 1288788 1792762 RB2469 Rhodopirellula baltica SH 1 glycosyltransferase-like protein NP_864962.1 1288021 R 243090 CDS NP_864963.1 32471969 1795465 complement(1288767..1289297) 1 NC_005027.1 acetyltransferase believed to catalyze the addition of the acetyl group that is attached through an O linkage to the first fucosyl residue of the colanic acid repetitive unit (E unit); colanic acid biosynthesis acetyltransferase WcaF 1289297 1795465 RB2470 Rhodopirellula baltica SH 1 colanic acid biosynthesis acetyltransferase WcaF NP_864963.1 1288767 R 243090 CDS NP_864964.1 32471970 1795940 complement(1289514..1290824) 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S74778; hypothetical protein slr1077 - Synechocystis sp. (strain; E=5e-34 gb:AAD43836.1; AF076290_6 (AF076290) mannosyltransferase; E=4e-16 embl:CAB43611.1; (AJ239004) galactosyl transferase [Streptococcus; E=9e-11 COG: slr1077; COG0438 Predicted glycosyltransferases; E=5e-35 PFAM: PF00534; Glycosyl transferases group 1; E=5e-21; poly(glycerol-phosphate) alpha-glucosyltransferase 1290824 1795940 RB2471 Rhodopirellula baltica SH 1 poly(glycerol-phosphate) alpha-glucosyltransferase NP_864964.1 1289514 R 243090 CDS NP_864965.1 32471971 1797101 complement(1290912..1292252) 1 NC_005027.1 hypothetical protein 1292252 1797101 RB2472 Rhodopirellula baltica SH 1 hypothetical protein NP_864965.1 1290912 R 243090 CDS NP_864966.1 32471972 1795718 complement(1292292..1293422) 1 NC_005027.1 PMID: 10382966 best DB hits: BLAST: pir:D72511; probable hexosyltransferase (EC 2.4.1.-) APE2066; E=2e-09 ddbj:BAB06407.1; (AP001516); E=1e-07 pir:E72354; probable hexosyltransferase (EC 2.4.1.-) TM0622 -; E=2e-06 COG: APE2066; COG0438 Predicted glycosyltransferases; E=1e-10 PFAM: PF00534; Glycosyl transferases group 1; E=1.2e-25; hexosyltransferase 1293422 1795718 RB2473 Rhodopirellula baltica SH 1 hexosyltransferase NP_864966.1 1292292 R 243090 CDS NP_864967.1 32471973 1793920 complement(1293454..1294251) 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: pir:E72354; probable hexosyltransferase (EC 2.4.1.-) TM0622 -; E=3e-22 pir:C70036; capsular polysaccharide biosynthesis homolog yveN -; E=7e-12 pir:A82676; conserved hypothetical protein XF1470 [imported] -; E=2e-10 COG: TM0622; COG0438 Predicted glycosyltransferases; E=3e-23 PFAM: PF00534; Glycosyl transferases group 1; E=6.1e-38; hexosyltransferase 1294251 1793920 RB2474 Rhodopirellula baltica SH 1 hexosyltransferase NP_864967.1 1293454 R 243090 CDS NP_864968.1 32471974 1797077 1294233..1295438 1 NC_005027.1 PMID: 9097039 best DB hits: BLAST: gb:AAG55028.1; AE005248_9 (AE005248) receptor; E=4e-61 gb:AAG54539.1; AE005200_1 (AE005200) Z0271 gene product; E=1e-60 swissprot:P28917; YDCC_ECOLI H REPEAT-ASSOCIATED PROTEIN IN; E=1e-60 PFAM: PF01811; Transposase; E=1.3e-65; H repeat-containing transposase 1295438 1797077 RB2475 Rhodopirellula baltica SH 1 H repeat-containing transposase NP_864968.1 1294233 D 243090 CDS NP_864969.1 32471975 1795750 complement(1295422..1295793) 1 NC_005027.1 hypothetical protein 1295793 1795750 RB2477 Rhodopirellula baltica SH 1 hypothetical protein NP_864969.1 1295422 R 243090 CDS NP_864970.1 32471976 1792799 1295756..1295872 1 NC_005027.1 hypothetical protein 1295872 1792799 RB2478 Rhodopirellula baltica SH 1 hypothetical protein NP_864970.1 1295756 D 243090 CDS NP_864971.1 32471977 1794665 complement(1295862..1296683) 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S77382; hypothetical protein sll1456 - Synechocystis sp. (strain; E=3e-12 pir:S76193; hypothetical protein - Synechocystis sp. (strain PCC; E=2e-08 pir:H70669; hypothetical protein Rv2955c - Mycobacterium; E=4e-07 COG: sll1456; COG0500 SAM-dependent methyltransferases; E=3e-13; hypothetical protein 1296683 1794665 RB2479 Rhodopirellula baltica SH 1 hypothetical protein NP_864971.1 1295862 R 243090 CDS NP_864972.1 32471978 1793247 complement(1296700..1296891) 1 NC_005027.1 hypothetical protein 1296891 1793247 RB2480 Rhodopirellula baltica SH 1 hypothetical protein NP_864972.1 1296700 R 243090 CDS NP_864973.1 32471979 1793540 complement(1296888..1298060) 1 NC_005027.1 PMID: 11259647 best DB hits: BLAST: pir:E72354; probable hexosyltransferase (EC 2.4.1.-) TM0622 -; E=0.001 gb:AAD19925.1; (AF105116) glucosyl transferase; E=0.002 embl:CAB75373.1; (AL139298) transferase [Streptomyces; E=0.002 COG: TM0622; COG0438 Predicted glycosyltransferases; E=9e-05 PFAM: PF00534; Glycosyl transferases group 1; E=1e-09; hexosyltransferase 1298060 1793540 RB2482 Rhodopirellula baltica SH 1 hexosyltransferase NP_864973.1 1296888 R 243090 CDS NP_864974.1 32471980 1794132 complement(1298057..1299304) 1 NC_005027.1 PMID: 9308175 best DB hits: BLAST: gb:AAD43837.1; AF076290_7 (AF076290) glycosyltransferase; E=5e-17 gb:AAB84956.1; (AE000829) LPS biosynthesis RfbU related protein; E=3e-05 pir:H69158; LPS biosynthesis RfbU related protein - Methanobacterium; E=3e-05 COG: MTH450; COG0438 Predicted glycosyltransferases; E=3e-06 PFAM: PF00534; Glycosyl transferases group 1; E=5.8e-18; glycosyltransferase 1299304 1794132 RB2484 Rhodopirellula baltica SH 1 glycosyltransferase NP_864974.1 1298057 R 243090 CDS NP_864975.1 32471981 1792109 complement(1299297..1300499) 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: pir:E72354; probable hexosyltransferase (EC 2.4.1.-) TM0622 -; E=5e-20 swissprot:Q9R9N1; LPSE_RHIME LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS; E=4e-10 swissprot:Q9R9N0; LPSD_RHIME LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS; E=1e-09 COG: TM0622; COG0438 Predicted glycosyltransferases; E=4e-21 PFAM: PF00534; Glycosyl transferases group 1; E=1.1e-22; hexosyltransferase 1300499 1792109 RB2485 Rhodopirellula baltica SH 1 hexosyltransferase NP_864975.1 1299297 R 243090 CDS NP_864976.1 32471982 1790673 complement(1300487..1301380) 1 NC_005027.1 PMID: 11214968 best DB hits: BLAST: pir:S76193; hypothetical protein - Synechocystis sp. (strain PCC; E=0.011 gb:AAB95303.1; (AC003105) unknown protein [Arabidopsis thaliana]; E=0.023 COG: sll1530; COG0500 SAM-dependent methyltransferases; E=0.001; hypothetical protein 1301380 1790673 RB2487 Rhodopirellula baltica SH 1 hypothetical protein NP_864976.1 1300487 R 243090 CDS NP_864977.1 32471983 1793618 complement(1301458..1301658) 1 NC_005027.1 hypothetical protein 1301658 1793618 RB2489 Rhodopirellula baltica SH 1 hypothetical protein NP_864977.1 1301458 R 243090 CDS NP_864978.1 32471984 1790391 complement(1301627..1301758) 1 NC_005027.1 hypothetical protein 1301758 1790391 RB2490 Rhodopirellula baltica SH 1 hypothetical protein NP_864978.1 1301627 R 243090 CDS NP_864979.1 32471985 1792205 complement(1301755..1302201) 1 NC_005027.1 best DB hits: BLAST: embl:CAB92986.1; (AL357152) hypothetical protein SCH18.03c; E=0.19; hypothetical protein 1302201 1792205 RB2491 Rhodopirellula baltica SH 1 hypothetical protein NP_864979.1 1301755 R 243090 CDS NP_864980.1 32471986 1794422 1302190..1302399 1 NC_005027.1 hypothetical protein 1302399 1794422 RB2492 Rhodopirellula baltica SH 1 hypothetical protein NP_864980.1 1302190 D 243090 CDS NP_864981.1 32471987 1791052 complement(1302420..1303754) 1 NC_005027.1 best DB hits: BLAST: pir:D69143; LPS biosynthesis RfbU related protein - Methanobacterium; E=8e-18 embl:CAB01935.1; (Z79692) ExpE4 [Sinorhizobium meliloti]; E=2e-16 embl:CAB01932.1; (Z79692) ExpE7 [Sinorhizobium meliloti]; E=4e-13 COG: MTH338; COG0438 Predicted glycosyltransferases; E=8e-19 PFAM: PF00534; Glycosyl transferases group 1; E=1.3e-20; LPS biosynthesis RfbU related protein 1303754 1791052 RB2493 Rhodopirellula baltica SH 1 LPS biosynthesis RfbU related protein NP_864981.1 1302420 R 243090 CDS NP_864982.1 32471988 1791663 1303740..1303904 1 NC_005027.1 hypothetical protein 1303904 1791663 RB2494 Rhodopirellula baltica SH 1 hypothetical protein NP_864982.1 1303740 D 243090 CDS NP_864983.1 32471989 1794592 1303912..1304043 1 NC_005027.1 hypothetical protein 1304043 1794592 RB2495 Rhodopirellula baltica SH 1 hypothetical protein NP_864983.1 1303912 D 243090 CDS NP_864984.1 32471990 1795645 complement(1304058..1304771) 1 NC_005027.1 hypothetical protein 1304771 1795645 RB2496 Rhodopirellula baltica SH 1 hypothetical protein NP_864984.1 1304058 R 243090 CDS NP_864985.1 32471991 1795239 1304778..1304906 1 NC_005027.1 hypothetical protein 1304906 1795239 RB2497 Rhodopirellula baltica SH 1 hypothetical protein NP_864985.1 1304778 D 243090 CDS NP_864986.1 32471992 1793766 complement(1304887..1305777) 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB92986.1; (AL357152) hypothetical protein SCH18.03c; E=7e-16 embl:CAB57489.1; (Y18930) hypothetical protein [Sulfolobus; E=3e-13 pir:S76193; hypothetical protein - Synechocystis sp. (strain PCC; E=1e-08 COG: sll1530; COG0500 SAM-dependent methyltransferases; E=1e-09 APE1011; COG2518 Protein-L-isoaspartate carboxylmethyltransferase; E=0.001; methyltransferase 1305777 1793766 RB2498 Rhodopirellula baltica SH 1 methyltransferase NP_864986.1 1304887 R 243090 CDS NP_864987.1 32471993 1791906 complement(1305785..1306963) 1 NC_005027.1 PMID: 11206551 best DB hits: BLAST: gb:AAG57095.1; AE005429_6 (AE005429) glycosyl transferase; E=1e-20 gb:AAD47915.1; AF127522_2 (AF127522) ; E=6e-18 pir:E70346; mannosyltransferase B - Aquifex aeolicus ----- gb:; E=1e-06 COG: aq_515; COG0438 Predicted glycosyltransferases; E=1e-07 PFAM: PF00534; Glycosyl transferases group 1; E=5.9e-06; glycosyl transferase 1306963 1791906 RB2499 Rhodopirellula baltica SH 1 glycosyl transferase NP_864987.1 1305785 R 243090 CDS NP_864988.1 32471994 1797126 complement(1306979..1307899) 1 NC_005027.1 PMID: 11337471 best DB hits: BLAST: gb:AAK04309.1; AE006259_3 (AE006259) UDP-glucose 4-epimerase; E=1e-23 swissprot:Q57664; GALE_METJA UDP-GLUCOSE 4-EPIMERASE; E=1e-23 gb:AAG18701.1; (AE004975) UDP-glucose 4-epimerase; GalE2; E=3e-23 COG: MJ0211; COG0451 Nucleoside-diphosphate-sugar epimerases; E=1e-24 MTH631; COG1087 UDP-glucose 4-epimerase; E=5e-20 PH0378; COG0451 Nucleoside-diphosphate-sugar epimerases; E=1e-19 PFAM: PF01073; 3-beta hydroxysteroid dehydrogenase; E=0.64 PF00106; short chain dehydrogenase; E=0.0027 PF01370; NAD dependent epimerase/dehydratase; E=4.2e-20; UDP-glucose 4-epimerase 1307899 1797126 RB2500 Rhodopirellula baltica SH 1 UDP-glucose 4-epimerase NP_864988.1 1306979 R 243090 CDS NP_864989.1 32471995 1795778 complement(1307948..1308874) 1 NC_005027.1 hypothetical protein 1308874 1795778 RB2501 Rhodopirellula baltica SH 1 hypothetical protein NP_864989.1 1307948 R 243090 CDS NP_864990.1 32471996 1791205 complement(1308884..1309522) 1 NC_005027.1 PMID: 9384377 best DB hits: BLAST: swissprot:P37515; MAA_BACSU PROBABLE MALTOSE O-ACETYLTRANSFERASE; E=6e-08 pir:E82411; hexapeptide-repeat containing-acetyltransferase VCA0836; E=2e-07 swissprot:Q58464; YA64_METJA HYPOTHETICAL PROTEIN MJ1064 -----; E=4e-07 COG: BS_yyaI; COG0110 Acetyltransferases (the isoleucine patch; E=5e-09 lacA; COG0110 Acetyltransferases (the isoleucine patch superfamily); E=3e-04 BH3001; COG0110 Acetyltransferases (the isoleucine patch; E=4e-04 PFAM: PF00132; Bacterial transferase hexapeptide (f; E=0.29; maltose O-acetyltransferase 1309522 1791205 RB2502 Rhodopirellula baltica SH 1 maltose O-acetyltransferase NP_864990.1 1308884 R 243090 CDS NP_864991.1 32471997 1790855 complement(1309509..1311056) 1 NC_005027.1 PMID: 10222209 best DB hits: BLAST: ddbj:BAA77727.1; (AB008676) flippase [Escherichia coli]; E=3e-05 gb:AAG57097.1; AE005429_8 (AE005429) O antigen flippase Wzx; E=3e-05 embl:CAA64437.1; (X94981) aceE [Acetobacter xylinus]; E=0.17; flippase 1311056 1790855 RB2503 Rhodopirellula baltica SH 1 flippase NP_864991.1 1309509 R 243090 CDS NP_864992.1 32471998 1792013 1311059..1311307 1 NC_005027.1 hypothetical protein 1311307 1792013 RB2505 Rhodopirellula baltica SH 1 hypothetical protein NP_864992.1 1311059 D 243090 CDS NP_864993.1 32471999 1791038 1311349..1311822 1 NC_005027.1 hypothetical protein 1311822 1791038 RB2506 Rhodopirellula baltica SH 1 hypothetical protein NP_864993.1 1311349 D 243090 CDS NP_864994.1 32472000 1796702 complement(1311886..1313064) 1 NC_005027.1 PMID: 8022265 best DB hits: BLAST: gb:AAG35060.1; AF314183_2 (AF314183) dTDP-glucose-4,6-dehydratase; E=1e-110 gb:AAF33465.1; (AF233324) 89% identity with E. coli; E=1e-107 swissprot:P55294; RFBB_NEIMB DTDP-GLUCOSE 4,6-DEHYDRATASE -----; E=1e-106 COG: NMB0063; COG1088 dTDP-D-glucose 4,6-dehydratase; E=1e-107 PFAM: PF01073; 3-beta hydroxysteroid dehydro; E=0.53 PF00106; short chain dehydrogenase; E=0.073 PF01370; NAD dependent epimerase/dehyd; E=6e-141; dTDP-glucose-4,6-dehydratase 1313064 rfbB 1796702 rfbB Rhodopirellula baltica SH 1 dTDP-glucose-4,6-dehydratase NP_864994.1 1311886 R 243090 CDS NP_864995.1 32472001 1795334 1313113..1313220 1 NC_005027.1 hypothetical protein 1313220 1795334 RB2508 Rhodopirellula baltica SH 1 hypothetical protein NP_864995.1 1313113 D 243090 CDS NP_864996.1 32472002 1791670 1313237..1313377 1 NC_005027.1 hypothetical protein 1313377 1791670 RB2509 Rhodopirellula baltica SH 1 hypothetical protein NP_864996.1 1313237 D 243090 CDS NP_864997.1 32472003 1796613 1313396..1313563 1 NC_005027.1 hypothetical protein 1313563 1796613 RB2510 Rhodopirellula baltica SH 1 hypothetical protein NP_864997.1 1313396 D 243090 CDS NP_864998.1 32472004 1790239 1313530..1313667 1 NC_005027.1 hypothetical protein 1313667 1790239 RB2511 Rhodopirellula baltica SH 1 hypothetical protein NP_864998.1 1313530 D 243090 CDS NP_864999.1 32472005 1793979 complement(1313675..1314652) 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: gb:AAD10232.1; (U72147) GDP-D-mannose dehydratase; E=1e-88 pir:S74433; GDP-D-mannose dehydratase 1 - Synechocystis sp. (strain; E=6e-86 gb:AAD44219.1; AF143772_25 (AF143772) mdhtA [Mycobacterium avium]; E=5e-83 COG: sll1212; COG1089 GDP-D-mannose dehydratase; E=6e-87 DR0711; COG0451 Nucleoside-diphosphate-sugar epimerases; E=1e-17 Rv0112; COG1089 GDP-D-mannose dehydratase; E=2e-13 PFAM: PF01370; NAD dependent epimerase/dehydratase; E=3.5e-16; GDP-D-mannose dehydratase 1 1314652 1793979 RB2512 Rhodopirellula baltica SH 1 GDP-D-mannose dehydratase 1 NP_864999.1 1313675 R 243090 CDS NP_865000.1 32472006 1792657 1314624..1314764 1 NC_005027.1 hypothetical protein 1314764 1792657 RB2513 Rhodopirellula baltica SH 1 hypothetical protein NP_865000.1 1314624 D 243090 CDS NP_865001.1 32472007 1793007 complement(1314954..1315145) 1 NC_005027.1 hypothetical protein 1315145 1793007 RB2514 Rhodopirellula baltica SH 1 hypothetical protein NP_865001.1 1314954 R 243090 CDS NP_865002.1 32472008 1790704 complement(1315248..1316657) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:A83252; probable UDP-glucoseGDP-mannose dehydrogenase WbpA; E=1e-124 pir:H72358; lipopolysaccharide biosynthesis protein - Thermotoga; E=4e-93 pir:F71153; probable Vi polysaccharide biosynthesis protein -; E=8e-85 COG: PA3159; COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; E=1e-125 VNG0046G; COG1004 Predicted UDP-glucose 6-dehydrogenase; E=9e-24 PFAM: PF00984; UDP-glucose/GDP-mannose dehydro; E=3.9e-131; UDP-glucose/GDP-mannose dehydrogenase 1316657 1790704 RB2515 Rhodopirellula baltica SH 1 UDP-glucose/GDP-mannose dehydrogenase NP_865002.1 1315248 R 243090 CDS NP_865003.1 32472009 1792301 1316669..1316860 1 NC_005027.1 hypothetical protein 1316860 1792301 RB2516 Rhodopirellula baltica SH 1 hypothetical protein NP_865003.1 1316669 D 243090 CDS NP_865004.1 32472010 1792170 1316854..1317012 1 NC_005027.1 hypothetical protein 1317012 1792170 RB2517 Rhodopirellula baltica SH 1 hypothetical protein NP_865004.1 1316854 D 243090 CDS NP_865005.1 32472011 1795922 complement(1317007..1318059) 1 NC_005027.1 PMID: 10718197 best DB hits: BLAST: gb:AAD10232.1; (U72147) GDP-D-mannose dehydratase; E=1e-112 pir:S74433; GDP-D-mannose dehydratase 1 - Synechocystis sp. (strain; E=1e-111 gb:AAD43839.1; AF076290_9 (AF076290) GDP-D-mannose; E=1e-102 COG: sll1212; COG1089 GDP-D-mannose dehydratase; E=1e-112 Cj1319; COG0451 Nucleoside-diphosphate-sugar epimerases; E=9e-14 Rv0112; COG1089 GDP-D-mannose dehydratase; E=1e-13 PFAM: PF01370; NAD dependent epimerase/dehydratase; E=1.3e-14; GDP-mannose 4,6 dehydratase 1318059 1795922 RB2518 Rhodopirellula baltica SH 1 GDP-mannose 4,6 dehydratase NP_865005.1 1317007 R 243090 CDS NP_865006.1 32472012 1796678 1318116..1318340 1 NC_005027.1 hypothetical protein 1318340 1796678 RB2519 Rhodopirellula baltica SH 1 hypothetical protein NP_865006.1 1318116 D 243090 CDS NP_865007.1 32472013 1790930 1318375..1318581 1 NC_005027.1 hypothetical protein 1318581 1790930 RB2520 Rhodopirellula baltica SH 1 hypothetical protein NP_865007.1 1318375 D 243090 CDS NP_865008.1 32472014 1790468 complement(1318633..1319577) 1 NC_005027.1 PMID: 9862812 best DB hits: BLAST: pdb:1BWS; A Chain A, Crystal Structure Of; E=8e-90 gb:AAG57112.1; AE005431_4 (AE005431) nucleotide; E=2e-89 pir:D55239; cpsB 5'-region hypothetical protein 2 - Escherichia coli; E=2e-89 COG: wcaG; COG0451 Nucleoside-diphosphate-sugar epimerases; E=2e-90 Cj1131c; COG1087 UDP-glucose 4-epimerase; E=2e-11 slr0583; COG0451 Nucleoside-diphosphate-sugar epimerases; E=3e-11 PFAM: PF01370; NAD dependent epimerase/dehydratase; E=0.071; GDP-fucose synthetase 1319577 1790468 RB2521 Rhodopirellula baltica SH 1 GDP-fucose synthetase NP_865008.1 1318633 R 243090 CDS NP_865009.1 32472015 1796707 1319449..1319796 1 NC_005027.1 hypothetical protein 1319796 1796707 RB2524 Rhodopirellula baltica SH 1 hypothetical protein NP_865009.1 1319449 D 243090 CDS NP_865010.1 32472016 1794872 complement(1320054..1320284) 1 NC_005027.1 best DB hits: BLAST: gb:AAB99952.1; (AF035443) wee1 homolog [Xenopus laevis]; E=0.31; hypothetical protein 1320284 1794872 RB2525 Rhodopirellula baltica SH 1 hypothetical protein NP_865010.1 1320054 R 243090 CDS NP_865011.1 32472017 1794886 1320541..1321128 1 NC_005027.1 signal peptide 1321128 1794886 RB2529 Rhodopirellula baltica SH 1 signal peptide NP_865011.1 1320541 D 243090 CDS NP_865012.1 32472018 1794138 1321125..1322540 1 NC_005027.1 best DB hits: BLAST: gb:AAG19823.1; (AE005067) Vng1537c [Halobacterium sp. NRC-1]; E=4e-27 pir:E75148; hypothetical protein PAB2116 - Pyrococcus abyssi (strain; E=9e-25 gb:AAG20566.1; (AE005127) Vng2502c [Halobacterium sp. NRC-1]; E=8e-24 COG: VNG1537C; COG1078 HD superfamily phosphohydrolases; E=4e-28; oxidoreductase 1322540 1794138 RB2530 Rhodopirellula baltica SH 1 oxidoreductase NP_865012.1 1321125 D 243090 CDS NP_865013.1 32472019 1792822 1322563..1323318 1 NC_005027.1 PMID: 7683645 PMID: 3284790 best DB hits: BLAST: swissprot:O31458; YBFT_BACSU HYPOTHETICAL 27.3 KD PROTEIN IN; E=2e-55 ddbj:BAB04139.1; (AP001508) N-acetylglucosamine-6-phosphate; E=4e-54 swissprot:O35000; NAGB_BACSU GLUCOSAMINE-6-PHOSPHATE ISOMERASE; E=8e-53 COG: BS_ybfT; COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate; E=2e-56 PFAM: PF01182; Glucosamine-6-phosphate isome; E=7.9e-96; glucosamine-6-phosphate isomerase 1323318 nagB 1792822 nagB Rhodopirellula baltica SH 1 glucosamine-6-phosphate isomerase NP_865013.1 1322563 D 243090 CDS NP_865014.1 32472020 1793307 1323315..1324823 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB88464.1; (AL353815) integral membrane protein; E=2e-07 pir:S74882; hypothetical protein sll1151 - Synechocystis sp. (strain; E=3e-07 gb:AAB90453.1; (AE001050) conserved hypothetical protein; E=1e-04 COG: sll1151; COG1808 Uncharacterized ACR; E=3e-08; hypothetical protein 1324823 1793307 RB2533 Rhodopirellula baltica SH 1 hypothetical protein NP_865014.1 1323315 D 243090 CDS NP_865015.1 32472021 1796640 1324897..1325199 1 NC_005027.1 hypothetical protein 1325199 1796640 RB2534 Rhodopirellula baltica SH 1 hypothetical protein NP_865015.1 1324897 D 243090 CDS NP_865016.1 32472022 1795713 complement(1325120..1326238) 1 NC_005027.1 PMID: 1304369 PMID: 11258796 best DB hits: BLAST: pir:E82497; ribose operon repressor VCA0132 [imported] - Vibrio; E=3e-40 gb:AAA62106.1; (L10328) rbs repressor [Escherichia coli]; E=7e-40 swissprot:P25551; RBSR_ECOLI RIBOSE OPERON REPRESSOR -----; E=9e-40 COG: VCA0132; COG1609 Transcriptional regulators; E=2e-41 PFAM: PF01047; MarR family; E=0.088 PF02796; Helix-turn-helix domain of re; E=0.72 PF00356; Bacterial regulatory proteins; E=2e-09; ribose operon repressor 1326238 1795713 RB2535 Rhodopirellula baltica SH 1 ribose operon repressor NP_865016.1 1325120 R 243090 CDS NP_865017.1 32472023 1795738 1325997..1326602 1 NC_005027.1 hypothetical protein 1326602 1795738 RB2537 Rhodopirellula baltica SH 1 hypothetical protein NP_865017.1 1325997 D 243090 CDS NP_865018.1 32472024 1794251 1326685..1328760 1 NC_005027.1 PMID: 10871362 best DB hits: BLAST: swissprot:Q9Z8M3; RS1_CHLPN 30S RIBOSOMAL PROTEIN S1 -----; E=1e-139 swissprot:O84100; RS1_CHLTR 30S RIBOSOMAL PROTEIN S1 -----; E=1e-138 pir:A81710; ribosomal protein S1 TC0373 [imported] - Chlamydia; E=1e-137 COG: CPn0315; COG0539 Ribosomal protein S1; E=1e-140 PFAM: PF00575; S1 RNA binding domain; E=0.0018 PF01479; S4 domain; E=0.83 PF00575; S1 RNA binding domain; E=1.4e-24; 30S ribosomal protein S1 1328760 1794251 RB2543 Rhodopirellula baltica SH 1 30S ribosomal protein S1 NP_865018.1 1326685 D 243090 CDS NP_865019.1 32472025 1793902 complement(1328773..1328931) 1 NC_005027.1 hypothetical protein 1328931 1793902 RB2545 Rhodopirellula baltica SH 1 hypothetical protein NP_865019.1 1328773 R 243090 CDS NP_865020.1 32472026 1791263 1328986..1330332 1 NC_005027.1 PMID: 11214968 best DB hits: BLAST: gb:AAG20070.1; (AE005086) Vng1869c [Halobacterium sp. NRC-1]; E=0.18; signal peptide 1330332 1791263 RB2547 Rhodopirellula baltica SH 1 signal peptide NP_865020.1 1328986 D 243090 CDS NP_865021.1 32472027 1792782 1330329..1332260 1 NC_005027.1 PMID: 11759840 best DB hits: BLAST: swissprot:Q9R6X3; PHYB_ANASP CYANOBACTERIAL PHYTOCHROME B -----; E=3e-32 gb:AAB89763.1; (AE001000) signal-transducing histidine kinase; E=4e-32 pir:E75617; sensor histidine kinase - Deinococcus radiodurans; E=6e-30 COG: DRA0205; COG0642 Sensory transduction histidine kinases; E=6e-31 PFAM: PF00672; HAMP domain; E=0.0036 PF00512; His Kinase A (phosphoacceptor) doma; E=7.2e-08 PF02518; Histidine kinase-, DNA gyrase B-, p; E=2e-35; phytochrome B 1332260 phyB 1792782 phyB Rhodopirellula baltica SH 1 phytochrome B NP_865021.1 1330329 D 243090 CDS NP_865022.1 32472028 1793721 1332257..1332721 1 NC_005027.1 PMID: 9278513 best DB hits: BLAST: pir:B69158; sensory transduction regulatory protein -; E=8e-11 swissprot:Q55169; RCP1_SYNY3 RESPONSE REGULATOR RCP1 -----; E=1e-09 gb:AAB89775.1; (AE001001) response regulator [Archaeoglobus; E=2e-08 COG: MTH445; COG0784 CheY-like receiver domains; E=8e-12 PFAM: PF00072; Response regulator receiver doma; E=8.1e-11; response regulator 1332721 1793721 RB2550 Rhodopirellula baltica SH 1 response regulator NP_865022.1 1332257 D 243090 CDS NP_865023.1 32472029 1791412 1332734..1332889 1 NC_005027.1 hypothetical protein 1332889 1791412 RB2551 Rhodopirellula baltica SH 1 hypothetical protein NP_865023.1 1332734 D 243090 CDS NP_865024.1 32472030 1794430 1332924..1333964 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: swissprot:Q9Z4S2; ARGC_THENE N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE; E=4e-69 swissprot:Q9X2A2; ARGC_THEMA N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE; E=5e-69 pir:E83562; N-acetyl-gamma-glutamyl-phosphate reductase PA0662; E=1e-67 COG: TM1782; COG0002 Acetylglutamate semialdehyde dehydrogenase; E=4e-70 PFAM: PF01408; Oxidoreductase, NAD-bi; E=0.016 PF01118; Semialdehyde dehydrogenase, N; E=8.3e-31 PF02774; Semialdehyde dehydrogenase, d; E=2.8e-27; N-acetyl-gamma-glutamyl-phosphate reductase 1333964 argC 1794430 argC Rhodopirellula baltica SH 1 N-acetyl-gamma-glutamyl-phosphate reductase NP_865024.1 1332924 D 243090 CDS NP_865025.1 32472031 1790966 1334003..1335400 1 NC_005027.1 best DB hits: BLAST: pir:T36892; hypothetical protein SCI51.29 - Streptomyces coelicolor; E=6e-28 pir:G72244; hypothetical protein - Thermotoga maritima (strain MSB8); E=3e-15 embl:CAC12021.1; (AL445065) conserved hypothetical protein; E=1e-07; phosphatase 1335400 1790966 RB2553 Rhodopirellula baltica SH 1 phosphatase NP_865025.1 1334003 D 243090 CDS NP_865026.1 32472032 1796484 complement(1335438..1335620) 1 NC_005027.1 hypothetical protein 1335620 1796484 RB2556 Rhodopirellula baltica SH 1 hypothetical protein NP_865026.1 1335438 R 243090 CDS NP_865027.1 32472033 1790062 1335672..1335857 1 NC_005027.1 hypothetical protein 1335857 1790062 RB2557 Rhodopirellula baltica SH 1 hypothetical protein NP_865027.1 1335672 D 243090 CDS NP_865028.1 32472034 1796811 1335881..1336927 1 NC_005027.1 PMID: 9023666 best DB hits: BLAST: swissprot:P55632; Y4QK_RHISN INTEGRASERECOMBINASE Y4QK; E=3e-39 swissprot:P55429; Y4EF_RHISN INTEGRASERECOMBINASE Y4EF; E=1e-32 prf:2115270D; integrase [Weeksella zoohelcum]; E=6e-23 COG: PAB0255; COG0582 Integrase; E=1e-20 PFAM: PF02899; Phage integrase, N-terminal S; E=0.3 PF00589; Phage integrase; E=8e-31; integrase 1336927 1796811 RB2558 Rhodopirellula baltica SH 1 integrase NP_865028.1 1335881 D 243090 CDS NP_865029.1 32472035 1792199 1336942..1338090 1 NC_005027.1 PMID: 1646375 best DB hits: BLAST: prf:2115270C; transposase [Weeksella zoohelcum]; E=1e-33 swissprot:P55631; Y4QJ_RHISN TRANSPOSASE Y4QJ -----; E=1e-32 swissprot:P24607; T801_PSESH TRANSPOSASE FOR INSERTION SEQUENCE; E=2e-09 PFAM: PF01096; Transcription factor S-II (TFIIS); E=0.19; transposase 1338090 1792199 RB2559 Rhodopirellula baltica SH 1 transposase NP_865029.1 1336942 D 243090 CDS NP_865030.1 32472036 1789954 1338094..1338390 1 NC_005027.1 hypothetical protein 1338390 1789954 RB2560 Rhodopirellula baltica SH 1 hypothetical protein NP_865030.1 1338094 D 243090 CDS NP_865031.1 32472037 1791721 complement(1338453..1339220) 1 NC_005027.1 hypothetical protein 1339220 1791721 RB2562 Rhodopirellula baltica SH 1 hypothetical protein NP_865031.1 1338453 R 243090 CDS NP_865032.1 32472038 1793947 complement(1339217..1340152) 1 NC_005027.1 PMID: 3122782 PMID: 3118900 best DB hits: BLAST: swissprot:P00345; LDH_BACME L-LACTATE DEHYDROGENASE ----- pir:; E=3e-49 swissprot:P20619; LDHX_BACPS L-LACTATE DEHYDROGENASE X -----; E=6e-47 swissprot:P16115; LDH_THEMA L-LACTATE DEHYDROGENASE ----- pir:; E=3e-46 COG: TM1867; COG0039 Malate/lactate dehydrogenases; E=2e-47 PFAM: PF00056; lactate/malate dehydrogenase, NA; E=6.7e-46 PF02866; lactate/malate dehydrogenase, al; E=2.4e-36; L-lactate dehydrogenase 1340152 ldh 1793947 ldh Rhodopirellula baltica SH 1 L-lactate dehydrogenase NP_865032.1 1339217 R 243090 CDS NP_865033.1 32472039 1790356 complement(1340281..1341144) 1 NC_005027.1 best DB hits: BLAST: pir:C75206; L-fuculose-phosphate aldolase (EC 4.1.2.17) - Pyrococcus; E=3e-18 pir:E71241; L-fuculose-phosphate aldolase (EC 4.1.2.17) - Pyrococcus; E=5e-18 gb:AAK03448.1; (AE006174) unknown [Pasteurella multocida]; E=2e-16 COG: PAB0117; COG0235 Ribulose-5-phosphate 4-epimerase and related; E=2e-19 PFAM: PF00596; Class II Aldolase and Adducin N-t; E=2.4e-21; L-fuculose-phosphate aldolase 1341144 1790356 RB2568 Rhodopirellula baltica SH 1 L-fuculose-phosphate aldolase NP_865033.1 1340281 R 243090 CDS NP_865034.1 32472040 1793627 complement(1341231..1341536) 1 NC_005027.1 PMID: 8491708 best DB hits: BLAST: swissprot:Q03512; CCML_SYNP7 CARBON DIOXIDE CONCENTRATING; E=1e-04 swissprot:P41792; EUTN_SALTY ETHANOLAMINE UTILIZATION PROTEIN; E=8e-04 swissprot:P77633; EUTN_ECOLI ETHANOLAMINE UTILIZATION PROTEIN; E=0.007; carbon dioxide concentrating mechanism protein CcmL 1341536 1793627 RB2571 Rhodopirellula baltica SH 1 carbon dioxide concentrating mechanism protein CcmL NP_865034.1 1341231 R 243090 CDS NP_865035.1 32472041 1796620 complement(1341533..1342282) 1 NC_005027.1 hypothetical protein 1342282 1796620 RB2574 Rhodopirellula baltica SH 1 hypothetical protein NP_865035.1 1341533 R 243090 CDS NP_865036.1 32472042 1791659 complement(1342305..1342592) 1 NC_005027.1 PMID: 11206551 best DB hits: BLAST: swissprot:P77633; EUTN_ECOLI ETHANOLAMINE UTILIZATION PROTEIN; E=0.005 gb:AAG57565.1; AE005474_13 (AE005474) detox protein [Escherichia; E=0.005 swissprot:P41792; EUTN_SALTY ETHANOLAMINE UTILIZATION PROTEIN; E=0.008; ethanolamine utilization protein EutN 1342592 1791659 RB2577 Rhodopirellula baltica SH 1 ethanolamine utilization protein EutN NP_865036.1 1342305 R 243090 CDS NP_865037.1 32472043 1794113 complement(1342595..1344019) 1 NC_005027.1 PMID: 11677609 best DB hits: BLAST: swissprot:P41793; EUTE_SALTY ETHANOLAMINE UTILIZATION PROTEIN EUTE; E=5e-84 gb:AAG57564.1; AE005474_12 (AE005474) ethanolamine utilization; E=1e-83 swissprot:P77445; EUTE_ECOLI ETHANOLAMINE UTILIZATION PROTEIN EUTE; E=5e-83 COG: eutE; COG1012 NAD-dependent aldehyde dehydrogenases; E=5e-84 PFAM: PF00171; Aldehyde dehydrogenase; E=0.21; ethanolamine utilization protein EutE 1344019 eutE 1794113 eutE Rhodopirellula baltica SH 1 ethanolamine utilization protein EutE NP_865037.1 1342595 R 243090 CDS NP_865038.1 32472044 1790907 complement(1344073..1344465) 1 NC_005027.1 PMID: 11677609 best DB hits: BLAST: swissprot:P41792; EUTN_SALTY ETHANOLAMINE UTILIZATION PROTEIN EUTN; E=4e-09 swissprot:P77633; EUTN_ECOLI ETHANOLAMINE UTILIZATION PROTEIN EUTN; E=5e-09 gb:AAD39013.1; (AF026270) PduN [Salmonella enterica serovar; E=5e-09; ethanolamine utilization protein EutN 1344465 eutN 1790907 eutN Rhodopirellula baltica SH 1 ethanolamine utilization protein EutN NP_865038.1 1344073 R 243090 CDS NP_865039.1 32472045 1792617 complement(1344446..1345681) 1 NC_005027.1 PMID: 8226682 PMID: 8702268 best DB hits: BLAST: ddbj:BAB06911.1; (AP001518) acetate kinase [Bacillus halodurans]; E=4e-75 swissprot:P37877; ACKA_BACSU ACETATE KINASE (ACETOKINASE) -----; E=2e-74 swissprot:P71104; ACKA_CLOAB ACETATE KINASE (ACETOKINASE) -----; E=6e-70 COG: BH3192; COG0282 Acetate kinase; E=3e-76 PFAM: PF00871; Acetokinase; E=2.5e-119; acetate kinase 1345681 ackA 1792617 ackA Rhodopirellula baltica SH 1 acetate kinase NP_865039.1 1344446 R 243090 CDS NP_865040.1 32472046 1794390 complement(1345766..1346035) 1 NC_005027.1 best DB hits: PFAM: PF00936; Bacterial microcompartments pr; E=1.2e-26; hypothetical protein 1346035 1794390 RB2585 Rhodopirellula baltica SH 1 hypothetical protein NP_865040.1 1345766 R 243090 CDS NP_865041.1 32472047 1793119 complement(1346106..1346402) 1 NC_005027.1 PMID: 7868611 best DB hits: BLAST: swissprot:P37448; PDUA_SALTY PROPANEDIOL UTILIZATION PROTEIN; E=2e-11 gb:AAD39009.1; (AF026270) PduJ [Salmonella enterica serovar; E=2e-11 gb:AAB84107.2; (AF026270) PduA [Salmonella enterica serovar; E=2e-11 PFAM: PF00936; Bacterial microcompartments pr; E=1.2e-43; ethanolamine utilization protein EutM 1346402 eutM 1793119 eutM Rhodopirellula baltica SH 1 ethanolamine utilization protein EutM NP_865041.1 1346106 R 243090 CDS NP_865042.1 32472048 1793228 complement(1346386..1346535) 1 NC_005027.1 hypothetical protein 1346535 1793228 RB2587 Rhodopirellula baltica SH 1 hypothetical protein NP_865042.1 1346386 R 243090 CDS NP_865043.1 32472049 1792225 complement(1346519..1347244) 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: pir:E72385; hypothetical protein TM0375 - Thermotoga maritima; E=7e-42 gb:AAD39011.1; (AF026270) PduL [Salmonella enterica serovar; E=3e-32; transcriptional regulator 1347244 1792225 RB2588 Rhodopirellula baltica SH 1 transcriptional regulator NP_865043.1 1346519 R 243090 CDS NP_865044.1 32472050 1791040 complement(1347241..1348146) 1 NC_005027.1 PMID: 10931310 best DB hits: BLAST: embl:CAB96011.1; (AL360055) transcriptional regulatory; E=3e-28 embl:CAC21630.1; (AL512667) deoR-family transcriptional; E=6e-25 ddbj:BAB05272.1; (AP001512) transcriptional regulator (DeoR; E=1e-24 COG: BH1553; COG1349 Transcriptional regulators of sugar metabolism; E=1e-25 PFAM: PF00392; Bacterial regulatory proteins, gnt; E=0.00039 PF01022; Bacterial regulatory protein, arsR; E=0.028 PF00455; Bacterial regulatory proteins, deo; E=2.1e-68; aga operon transcriptional repressor 1348146 1791040 RB2590 Rhodopirellula baltica SH 1 aga operon transcriptional repressor NP_865044.1 1347241 R 243090 CDS NP_865045.1 32472051 1792790 complement(1348112..1348249) 1 NC_005027.1 hypothetical protein 1348249 1792790 RB2591 Rhodopirellula baltica SH 1 hypothetical protein NP_865045.1 1348112 R 243090 CDS NP_865046.1 32472052 1790120 complement(1348333..1348926) 1 NC_005027.1 hypothetical protein 1348926 1790120 RB2592 Rhodopirellula baltica SH 1 hypothetical protein NP_865046.1 1348333 R 243090 CDS NP_865047.1 32472053 1796994 1349011..1350099 1 NC_005027.1 PMID: 20196006 best DB hits: BLAST: swissprot:P29939; YCB6_PSEDE HYPOTHETICAL 15.0 KD PROTEIN IN COBO; E=0.55 PFAM: PF00892; Integral membrane protein DUF6; E=7.1e-05; hypothetical protein 1350099 1796994 RB2593 Rhodopirellula baltica SH 1 hypothetical protein NP_865047.1 1349011 D 243090 CDS NP_865048.1 32472054 1792880 1350137..1353130 1 NC_005027.1 best DB hits: BLAST: gb:AAC98350.1; (AF075462) ADP-ribosylation factor-directed GTPase; E=0.22 gb:AAF55676.2; (AE003726) CG7240 gene product [Drosophila; E=0.39; ADP-ribosylation factor-directed GTPase activating protein isoform b 1353130 1792880 RB2596 Rhodopirellula baltica SH 1 ADP-ribosylation factor-directed GTPase activating protein isoform b NP_865048.1 1350137 D 243090 CDS NP_865049.1 32472055 1791669 1353165..1353377 1 NC_005027.1 hypothetical protein 1353377 1791669 RB2602 Rhodopirellula baltica SH 1 hypothetical protein NP_865049.1 1353165 D 243090 CDS NP_865050.1 32472056 1791379 complement(1353170..1353277) 1 NC_005027.1 hypothetical protein 1353277 1791379 RB2603 Rhodopirellula baltica SH 1 hypothetical protein NP_865050.1 1353170 R 243090 CDS NP_865051.1 32472057 1791523 complement(1353293..1353445) 1 NC_005027.1 hypothetical protein 1353445 1791523 RB2604 Rhodopirellula baltica SH 1 hypothetical protein NP_865051.1 1353293 R 243090 CDS NP_865052.1 32472058 1791676 complement(1353544..1358364) 1 NC_005027.1 PMID: 2116366 best DB hits: BLAST: pdb:2AZA; A Chain A, Azurin (Oxidized) ----- pdb: 2AZA B Chain; E=0.012 swissprot:P34097; AZUR_PSEPU AZURIN ----- pir: A37338 azurin -; E=0.024 pdb:1NZR; A Chain A, Azurin Mutant With Trp 48 Replaced By Met; E=0.033 COG: PA4922; COG3241 Azurin; E=0.008 PFAM: PF00127; Copper binding proteins, plasto; E=5e-06 PF00034; Cytochrome c; E=0.0036; azurin precursor 1358364 1791676 RB2605 Rhodopirellula baltica SH 1 azurin precursor NP_865052.1 1353544 R 243090 CDS NP_865053.1 32472059 1792528 1358405..1358638 1 NC_005027.1 hypothetical protein 1358638 1792528 RB2612 Rhodopirellula baltica SH 1 hypothetical protein NP_865053.1 1358405 D 243090 CDS NP_865054.1 32472060 1795725 complement(1358580..1360514) 1 NC_005027.1 PMID: 9634230 best DB hits: BLAST: pir:F70837; probable sulfatase (EC 3.1.6.-) atsG - Mycobacterium; E=3e-23 gb:AAG17207.1; AF217204_1 (AF217204) heparan sulfate sulfamidase; E=3e-17 gb:AAG41945.1; AF304053_1 (AF304053) heparan N-sulfatase [Mus; E=2e-16 COG: Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=3e-24 TM1703; COG1368 Phosphoglycerol transferase and related proteins,; E=4e-04 ydeN; COG3119 Arylsulfatase A and related enzymes; E=6e-04 PFAM: PF00884; Sulfatase; E=9.8e-18; sulfatase atsG 1360514 1795725 RB2613 Rhodopirellula baltica SH 1 sulfatase atsG NP_865054.1 1358580 R 243090 CDS NP_865055.1 32472061 1790990 complement(1360632..1360868) 1 NC_005027.1 hypothetical protein 1360868 1790990 RB2618 Rhodopirellula baltica SH 1 hypothetical protein NP_865055.1 1360632 R 243090 CDS NP_865056.1 32472062 1796834 1360823..1361656 1 NC_005027.1 PMID: 10747959 best DB hits: BLAST: swissprot:P37545; YABD_BACSU DEOXYRIBONUCLEASE YABD; E=2e-45 pir:H72349; conserved hypothetical protein - Thermotoga maritima; E=1e-37 ddbj:BAB03773.1; (AP001507) BH0054~unknown conserved protein; E=6e-37 COG: BS_yabD; COG0084 Mg-dependent DNase; E=2e-46 PFAM: PF01026; TatD related DNase; E=1.8e-81; deoxyribonuclease yabD 1361656 1796834 RB2619 Rhodopirellula baltica SH 1 deoxyribonuclease yabD NP_865056.1 1360823 D 243090 CDS NP_865057.1 32472063 1792003 1361729..1361956 1 NC_005027.1 hypothetical protein 1361956 1792003 RB2620 Rhodopirellula baltica SH 1 hypothetical protein NP_865057.1 1361729 D 243090 CDS NP_865058.1 32472064 1790825 1361887..1362576 1 NC_005027.1 PMID: 10629178 PMID: 3537313 PMID: 9878437 best DB hits: BLAST: gb:AAF15533.1; AF196490_3 (AF196490) phosphate regulon response; E=2e-35 swissprot:Q52990; PHOB_RHIME PHOSPHATE REGULON TRANSCRIPTIONAL; E=2e-31 embl:CAA11074.1; (AJ223073) phosphate regulatory protein; E=9e-31 COG: PA5360; COG0745 Response regulators consisting of a CheY-like; E=5e-31 phoB; COG0745 Response regulators consisting of a CheY-like receiver; E=7e-31 TM1655; COG0745 Response regulators consisting of a CheY-like; E=1e-30 PFAM: PF00072; Response regulator receiver doma; E=2.5e-28 PF00486; Transcriptional regulatory prote; E=1.2e-24; phosphate regulon response regulator PhoB 1362576 1790825 RB2621 Rhodopirellula baltica SH 1 phosphate regulon response regulator PhoB NP_865058.1 1361887 D 243090 CDS NP_865059.1 32472065 1795440 complement(1362584..1362730) 1 NC_005027.1 hypothetical protein 1362730 1795440 RB2623 Rhodopirellula baltica SH 1 hypothetical protein NP_865059.1 1362584 R 243090 CDS NP_865060.1 32472066 1795514 1362723..1363412 1 NC_005027.1 signal peptide 1363412 1795514 RB2624 Rhodopirellula baltica SH 1 signal peptide NP_865060.1 1362723 D 243090 CDS NP_865061.1 32472067 1792796 complement(1363440..1364447) 1 NC_005027.1 PMID: 11214968 best DB hits: BLAST: pir:B72316; conserved hypothetical protein - Thermotoga maritima; E=0.001 pir:T50902; Mg protoporphyrin IX monomethyl ester oxidative cyclase; E=0.011 embl:CAA70016.1; (Y08763) methyltransferase [Streptomyces; E=0.013 COG: TM0938; COG0500 SAM-dependent methyltransferases; E=1e-04; hypothetical protein 1364447 1792796 RB2626 Rhodopirellula baltica SH 1 hypothetical protein NP_865061.1 1363440 R 243090 CDS NP_865062.1 32472068 1791836 1364551..1365579 1 NC_005027.1 PMID: 8557349 best DB hits: BLAST: swissprot:O06822; G3P_MYCTU GLYCERALDEHYDE 3-PHOSPHATE; E=2e-99 swissprot:P46795; G3P_BORBU GLYCERALDEHYDE 3-PHOSPHATE; E=2e-99 swissprot:P46713; G3P_MYCLE GLYCERALDEHYDE 3-PHOSPHATE; E=6e-99 COG: Rv1436; COG0057 Glyceraldehyde-3-phosphate; E=1e-101 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=0.11 PF00044; Glyceraldehyde 3-phosphate dehyd; E=2.2e-118 PF02800; Glyceraldehyde 3-phosphate dehyd; E=5.5e-109; glyceraldehyde 3-phosphate dehydrogenase 1365579 1791836 RB2627 Rhodopirellula baltica SH 1 glyceraldehyde 3-phosphate dehydrogenase NP_865062.1 1364551 D 243090 CDS NP_865063.1 32472069 1791900 complement(1365576..1365707) 1 NC_005027.1 hypothetical protein 1365707 1791900 RB2628 Rhodopirellula baltica SH 1 hypothetical protein NP_865063.1 1365576 R 243090 CDS NP_865064.1 32472070 1793340 1365746..1366993 1 NC_005027.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 1366993 obgE 1793340 obgE Rhodopirellula baltica SH 1 GTPase ObgE NP_865064.1 1365746 D 243090 CDS NP_865065.1 32472071 1796789 1367010..1367897 1 NC_005027.1 PMID: 7601846 best DB hits: BLAST: pir:T36391; hypothetical protein SCE94.31c - Streptomyces coelicolor; E=4e-11 pir:S75559; hypothetical protein slr0812 - Synechocystis sp. (strain; E=3e-10 gb:AAG28531.1; AF198621_2 (AF198621) 32 kDa replication; E=7e-10 COG: slr0812; COG1521 transcriptional regulators, homologs of; E=3e-11 TM0883; COG1521 transcriptional regulators, homologs of Bvg; E=7e-09 NMB2075_2; COG1521 transcriptional regulators, homologs of; E=6e-07; hypothetical protein 1367897 1796789 RB2632 Rhodopirellula baltica SH 1 hypothetical protein NP_865065.1 1367010 D 243090 CDS NP_865066.1 32472072 1794268 complement(1367907..1368080) 1 NC_005027.1 hypothetical protein 1368080 1794268 RB2634 Rhodopirellula baltica SH 1 hypothetical protein NP_865066.1 1367907 R 243090 CDS NP_865067.1 32472073 1794681 complement(1368100..1368450) 1 NC_005027.1 hypothetical protein 1368450 1794681 RB2636 Rhodopirellula baltica SH 1 hypothetical protein NP_865067.1 1368100 R 243090 CDS NP_865068.1 32472074 1792382 1368449..1369171 1 NC_005027.1 PMID: 1650910 best DB hits: BLAST: pir:A83418; ribonuclease H PA1815 [imported] - Pseudomonas; E=1e-04 pdb:1RBR; Ribonuclease H (E.C.3.1.26.4) Mutant With His 62; E=2e-04 swissprot:P23329; RNH_SALTY RIBONUCLEASE HI (RNASE HI); E=5e-04 COG: PA1815; COG0328 Ribonuclease HI; E=1e-05; ribonuclease HI 1369171 rnhA 1792382 rnhA Rhodopirellula baltica SH 1 ribonuclease HI NP_865068.1 1368449 D 243090 CDS NP_865069.1 32472075 1793727 1369232..1371442 1 NC_005027.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching enzyme 1371442 glgB 1793727 glgB Rhodopirellula baltica SH 1 glycogen branching enzyme NP_865069.1 1369232 D 243090 CDS NP_865070.1 32472076 1791618 complement(1371720..1372769) 1 NC_005027.1 signal peptide 1372769 1791618 RB2640 Rhodopirellula baltica SH 1 signal peptide NP_865070.1 1371720 R 243090 CDS NP_865071.1 32472077 1796617 complement(1372782..1373147) 1 NC_005027.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 1373147 1796617 RB2642 Rhodopirellula baltica SH 1 7-cyano-7-deazaguanine reductase NP_865071.1 1372782 R 243090 CDS NP_865072.1 32472078 1791397 1373182..1373955 1 NC_005027.1 PMID: 11016950 best DB hits: BLAST: gb:AAG20939.1; (AE005160) Vng6305c [Halobacterium sp. NRC-1]; E=3e-42 embl:CAC23039.1; (AL512964) homolog of ORF_f223 [Escherichia; E=2e-16 pir:C82625; conserved hypothetical protein XF1894 [imported] -; E=1e-15 COG: XF1894; COG0602 Organic radical activating enzymes; E=1e-16 PAB2273; COG2896 Molybdenum cofactor biosynthesis enzyme; E=4e-05 MJ1645; COG0602 Organic radical activating enzymes; E=3e-04 PFAM: PF02143; Radical activating enzyme; E=1e-06 PF01444; moaA / nifB / pqqE family; E=0.0011; radical activating enzyme 1373955 1791397 RB2645 Rhodopirellula baltica SH 1 radical activating enzyme NP_865072.1 1373182 D 243090 CDS NP_865073.1 32472079 1790167 complement(1374116..1374889) 1 NC_005027.1 PMID: 12024217; signal peptide 1374889 1790167 RB2647 Rhodopirellula baltica SH 1 signal peptide NP_865073.1 1374116 R 243090 CDS NP_865074.1 32472080 1795571 1374987..1375148 1 NC_005027.1 hypothetical protein 1375148 1795571 RB2649 Rhodopirellula baltica SH 1 hypothetical protein NP_865074.1 1374987 D 243090 CDS NP_865075.1 32472081 1797041 complement(1375141..1377528) 1 NC_005027.1 PMID: 11759840 best DB hits: BLAST: pir:S77541; hypothetical protein slr1207 - Synechocystis sp. (strain; E=0.007 COG: slr1207; COG0845 Membrane-fusion protein; E=7e-04 PFAM: PF02163; Sterol-regulatory element bindi; E=0.79 PF00364; Biotin-requiring enzyme; E=0.046; hypothetical protein 1377528 1797041 RB2651 Rhodopirellula baltica SH 1 hypothetical protein NP_865075.1 1375141 R 243090 CDS NP_865076.1 32472082 1794501 complement(1377489..1379618) 1 NC_005027.1 PMID: 11206551 best DB hits: BLAST: gb:AAG54840.1; AE005229_3 (AE005229) membrane spanning; E=0.072 gb:AAG09745.1; AF232237_3 (AF232237) membrane fusion protein; E=0.23 pir:E70342; cation efflux system (czcB-like) - Aquifex aeolicus; E=0.43 PFAM: PF00364; Biotin-requiring enzyme; E=0.0014 PF00529; HlyD family secretion protein; E=2.9e-05; membrane spanning export protein 1379618 1794501 RB2654 Rhodopirellula baltica SH 1 membrane spanning export protein NP_865076.1 1377489 R 243090 CDS NP_865077.1 32472083 1796637 complement(1379700..1380779) 1 NC_005027.1 best DB hits: BLAST: pir:T35248; probable oxidoreductase - Streptomyces coelicolor; E=1e-40 gb:AAK01518.1; (AF241171) oxidoreductase [Pseudomonas; E=0.001 swissprot:P73069; Y48L_SYNY3 YCF48-LIKE PROTEIN ----- pir:; E=0.003 PFAM: PF02012; BNR repeat; E=0.039; oxidoreductase 1380779 1796637 RB2656 Rhodopirellula baltica SH 1 oxidoreductase NP_865077.1 1379700 R 243090 CDS NP_865078.2 161579035 1792675 complement(1380946..1382265) 1 NC_005027.1 catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase 1382265 xylA 1792675 xylA Rhodopirellula baltica SH 1 xylose isomerase NP_865078.2 1380946 R 243090 CDS NP_865079.1 32472085 1791785 1382315..1382557 1 NC_005027.1 hypothetical protein 1382557 1791785 RB2659 Rhodopirellula baltica SH 1 hypothetical protein NP_865079.1 1382315 D 243090 CDS NP_865080.1 32472086 1790472 complement(1382326..1382661) 1 NC_005027.1 hypothetical protein 1382661 1790472 RB2660 Rhodopirellula baltica SH 1 hypothetical protein NP_865080.1 1382326 R 243090 CDS NP_865081.1 32472087 1792350 1382713..1383747 1 NC_005027.1 PMID: 1387377 PMID: 2556375 PMID: 2556376 PMID: 7590298 best DB hits: BLAST: gb:AAK05260.1; AE006348_5 (AE006348); E=3e-22 swissprot:P18579; MURB_BACSU UDP-N-ACETYLENOLPYRUVOYLGLUCOSAMINE; E=2e-19 ddbj:BAB06283.1; (AP001515) UDP-N-acetylenolpyruvoylglucosamine; E=6e-17 COG: BS_murB; COG0812 UDP-N-acetylmuramate dehydrogenase; E=2e-20 PFAM: PF02215; UDP-N-acetylenolpyruvoylglucos; E=1.5e-34 PF02873; UDP-N-acetylenolpyruvoylglucos; E=0.3; UDP-N-acetylenolpyruvoylglucosamine reductase 1383747 murB 1792350 murB Rhodopirellula baltica SH 1 UDP-N-acetylenolpyruvoylglucosamine reductase NP_865081.1 1382713 D 243090 CDS NP_865082.1 32472088 1789989 1383758..1384642 1 NC_005027.1 signal peptide 1384642 1789989 RB2662 Rhodopirellula baltica SH 1 signal peptide NP_865082.1 1383758 D 243090 CDS NP_865083.1 32472089 1790290 1384715..1386346 1 NC_005027.1 PMID: 11181566 best DB hits: BLAST: gb:AAG41945.1; AF304053_1 (AF304053) heparan N-sulfatase [Mus; E=5e-36 gb:AAG41946.1; AF304054_1 (AF304054) mutant heparan N-sulfatase; E=2e-35 gb:AAF29467.1; (AF156255) N-sulfoglucosamine sulfohydrolase [Mus; E=1e-34 COG: Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=2e-27 VC2041; COG3083 Predicted hydrolase of alkaline phosphatase; E=0.003 aslA; COG3119 Arylsulfatase A and related enzymes; E=0.005 PFAM: PF00884; Sulfatase; E=3.3e-16 PF01974; tRNA intron endonuclease, catal; E=0.44 PF00884; Sulfatase; E=8.6e-21; heparan N-sulfatase 1386346 1790290 RB2663 Rhodopirellula baltica SH 1 heparan N-sulfatase NP_865083.1 1384715 D 243090 CDS NP_865084.1 32472090 1791128 1386348..1386527 1 NC_005027.1 hypothetical protein 1386527 1791128 RB2665 Rhodopirellula baltica SH 1 hypothetical protein NP_865084.1 1386348 D 243090 CDS NP_865085.1 32472091 1794702 complement(1386488..1387198) 1 NC_005027.1 hypothetical protein 1387198 1794702 RB2667 Rhodopirellula baltica SH 1 hypothetical protein NP_865085.1 1386488 R 243090 CDS NP_865086.1 32472092 1791625 complement(1387021..1387995) 1 NC_005027.1 hypothetical protein 1387995 1791625 RB2669 Rhodopirellula baltica SH 1 hypothetical protein NP_865086.1 1387021 R 243090 CDS NP_865087.1 32472093 1795837 complement(1388043..1389056) 1 NC_005027.1 PMID: 7482699 best DB hits: BLAST: ddbj:BAA91718.1; (AK001486) unnamed protein product [Homo; E=0.007 ddbj:BAB08640.1; (AB009048) gene_id:K15E6.5~unknown protein; E=0.012 pir:T00095; hypothetical protein KIAA0470 - human ----- ddbj:; E=0.052 PFAM: PF00498; FHA domain; E=1.8e-12; hypothetical protein 1389056 1795837 RB2671 Rhodopirellula baltica SH 1 hypothetical protein NP_865087.1 1388043 R 243090 CDS NP_865088.1 32472094 1791153 complement(1389086..1390600) 1 NC_005027.1 PMID: 1835671 best DB hits: BLAST: pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=3e-43 ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=7e-43 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=5e-41 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=3e-44 PFAM: PF00069; Protein kinase domain; E=6e-61; serine/threonine protein kinase 1390600 1791153 RB2673 Rhodopirellula baltica SH 1 serine/threonine protein kinase NP_865088.1 1389086 R 243090 CDS NP_865089.1 32472095 1791718 complement(1390637..1390762) 1 NC_005027.1 hypothetical protein 1390762 1791718 RB2675 Rhodopirellula baltica SH 1 hypothetical protein NP_865089.1 1390637 R 243090 CDS NP_865090.1 32472096 1794476 complement(1390759..1391589) 1 NC_005027.1 PMID: 10192928 PMID: 3276686 best DB hits: BLAST: swissprot:Q9Z9J0; TRUA_BACHD TRNA PSEUDOURIDINE SYNTHASE A; E=6e-39 gb:AAK04584.1; AE006284_2 (AE006284) tRNA pseudouridine synthase A; E=5e-38 swissprot:O84469; TRUA_CHLTR TRNA PSEUDOURIDINE SYNTHASE A; E=1e-37 COG: BH0167; COG0101 Pseudouridylate synthase (tRNA psi55); E=6e-40 PFAM: PF01416; tRNA pseudouridine synthase; E=5.6e-49; tRNA pseudouridine synthase A 1391589 truA 1794476 truA Rhodopirellula baltica SH 1 tRNA pseudouridine synthase A NP_865090.1 1390759 R 243090 CDS NP_865091.1 32472097 1794707 1391557..1392078 1 NC_005027.1 best DB hits: PFAM: PF01982; Domain of unknown function DUF120; E=0.28; hypothetical protein 1392078 1794707 RB2679 Rhodopirellula baltica SH 1 hypothetical protein NP_865091.1 1391557 D 243090 CDS NP_865092.1 32472098 1790476 complement(1392163..1393566) 1 NC_005027.1 PMID: 11953415 best DB hits: BLAST: gb:AAC45602.1; (U75949) suppressor for copper-sensitivity C; E=0.011 pir:S75747; hypothetical protein slr0565 - Synechocystis sp.; E=0.032 ddbj:BAA20493.1; (AB004696) 27kDa outer membrane protein; E=0.11; suppressor for copper-sensitivity C 1393566 1790476 RB2680 Rhodopirellula baltica SH 1 suppressor for copper-sensitivity C NP_865092.1 1392163 R 243090 CDS NP_865093.1 32472099 1796195 complement(1393530..1393781) 1 NC_005027.1 hypothetical protein 1393781 1796195 RB2682 Rhodopirellula baltica SH 1 hypothetical protein NP_865093.1 1393530 R 243090 CDS NP_865094.1 32472100 1791406 1393591..1393797 1 NC_005027.1 hypothetical protein 1393797 1791406 RB2683 Rhodopirellula baltica SH 1 hypothetical protein NP_865094.1 1393591 D 243090 CDS NP_865095.1 32472101 1789977 complement(1393950..1394714) 1 NC_005027.1 PMID: 3902795 best DB hits: BLAST: pir:C83489; probable transcriptional regulator PA1261 [imported] -; E=2e-26 pir:D69749; transcriptional regulator AraCXylS family homolog ybfI -; E=2e-11 pir:F82380; transcriptional regulator AraCXylS family VCA1074; E=4e-11 COG: PA1261; COG2207 AraC-type DNA-binding domain-containing proteins; E=2e-27 BS_adaA; COG2169 Adenosine deaminase; E=3e-10 BH3842_2; COG2207 AraC-type DNA-binding domain-containing proteins; E=6e-10 PFAM: PF00165; Bacterial regulatory helix-turn-heli; E=5.4e-23; transcriptional regulator 1394714 araC 1789977 araC Rhodopirellula baltica SH 1 transcriptional regulator NP_865095.1 1393950 R 243090 CDS NP_865096.1 32472102 1791555 1394692..1394952 1 NC_005027.1 hypothetical protein 1394952 1791555 RB2686 Rhodopirellula baltica SH 1 hypothetical protein NP_865096.1 1394692 D 243090 CDS NP_865097.1 32472103 1790720 1394945..1398250 1 NC_005027.1 hypothetical protein 1398250 1790720 RB2688 Rhodopirellula baltica SH 1 hypothetical protein NP_865097.1 1394945 D 243090 CDS NP_865098.1 32472104 1795428 1398243..1399763 1 NC_005027.1 hypothetical protein 1399763 1795428 RB2690 Rhodopirellula baltica SH 1 hypothetical protein NP_865098.1 1398243 D 243090 CDS NP_865099.1 32472105 1792819 1399779..1402748 1 NC_005027.1 hypothetical protein 1402748 1792819 RB2693 Rhodopirellula baltica SH 1 hypothetical protein NP_865099.1 1399779 D 243090 CDS NP_865100.1 32472106 1796736 1402745..1404271 1 NC_005027.1 sulfatase 1404271 1796736 RB2697 Rhodopirellula baltica SH 1 sulfatase NP_865100.1 1402745 D 243090 CDS NP_865101.1 32472107 1793917 complement(1404253..1404417) 1 NC_005027.1 hypothetical protein 1404417 1793917 RB2700 Rhodopirellula baltica SH 1 hypothetical protein NP_865101.1 1404253 R 243090 CDS NP_865102.1 32472108 1795665 complement(1404427..1406121) 1 NC_005027.1 PMID: 8020961 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=3e-25 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=7e-23 gb:AAG58881.1; AE005599_13 (AE005599) sulfatase; E=1e-22 COG: yidJ; COG3119 Arylsulfatase A and related enzymes; E=4e-23 PA0924; COG3083 Predicted hydrolase of alkaline phosphatase; E=3e-04 PFAM: PF00884; Sulfatase; E=2.5e-44; N-acetylgalactosamine 6-sulfate sulfatase 1406121 1795665 RB2701 Rhodopirellula baltica SH 1 N-acetylgalactosamine 6-sulfate sulfatase NP_865102.1 1404427 R 243090 CDS NP_865103.1 32472109 1791046 1406189..1407112 1 NC_005027.1 PMID: 8112578 best DB hits: BLAST: swissprot:P43478; CGKA_ALTCA KAPPA-CARRAGEENASE PRECURSOR -----; E=1e-61 gb:AAC27890.1; (AF007559) kappa-carrageenase precursor [Zobellia; E=3e-56 pir:T18265; endo-1,3(4)-beta-glucanase (EC 3.2.1.6) - Clostridium; E=8e-07 COG: TM0024; COG2273 Beta-glucanase/Beta-glucan synthetase; E=1e-05 PFAM: PF00722; Glycosyl hydrolases family 16; E=4.5e-07; kappa-carrageenase [precursor] 1407112 1791046 RB2702 Rhodopirellula baltica SH 1 kappa-carrageenase [precursor] NP_865103.1 1406189 D 243090 CDS NP_865104.1 32472110 1793663 1407229..1407564 1 NC_005027.1 hypothetical protein 1407564 1793663 RB2704 Rhodopirellula baltica SH 1 hypothetical protein NP_865104.1 1407229 D 243090 CDS NP_865105.1 32472111 1796863 1407665..1408162 1 NC_005027.1 hypothetical protein 1408162 1796863 RB2705 Rhodopirellula baltica SH 1 hypothetical protein NP_865105.1 1407665 D 243090 CDS NP_865106.1 32472112 1790124 1408155..1408655 1 NC_005027.1 hypothetical protein 1408655 1790124 RB2706 Rhodopirellula baltica SH 1 hypothetical protein NP_865106.1 1408155 D 243090 CDS NP_865107.1 32472113 1792737 complement(1408843..1410375) 1 NC_005027.1 PMID: 8244397 best DB hits: BLAST: gb:AAA16877.1; (L13329) iduronate-2-sulfatase [Homo sapiens]; E=6e-52 gb:AAB33747.1; iduronate-2-sulfatase, IDS {EC 3.1.6.13} [human,; E=3e-51 gb:AAF47771.1; (AE003478) CG12014 gene product [Drosophila; E=7e-49 COG: PA0031; COG3119 Arylsulfatase A and related enzymes; E=1e-33 PFAM: PF00884; Sulfatase; E=8.6e-28; iduronate-2-sulfatase 1410375 1792737 RB2707 Rhodopirellula baltica SH 1 iduronate-2-sulfatase NP_865107.1 1408843 R 243090 CDS NP_865108.1 32472114 1790042 1410335..1410514 1 NC_005027.1 hypothetical protein 1410514 1790042 RB2708 Rhodopirellula baltica SH 1 hypothetical protein NP_865108.1 1410335 D 243090 CDS NP_865109.1 32472115 1790090 complement(1410525..1411547) 1 NC_005027.1 PMID: 11206551 best DB hits: BLAST: gb:AAG58528.1; AE005565_3 (AE005565) protein of glp regulon; E=2e-08 swissprot:P54493; YQGP_BACSU HYPOTHETICAL 56.4 KD PROTEIN IN; E=1e-07 pir:A82363; glpG protein VC0099 [imported] - Vibrio cholerae (group; E=9e-07 COG: VC0099; COG0705 Uncharacterized membrane protein (homolog of; E=9e-08 PFAM: PF01694; Rhomboid family; E=3.4e-26; glpG protein 1411547 1790090 RB2710 Rhodopirellula baltica SH 1 glpG protein NP_865109.1 1410525 R 243090 CDS NP_865110.1 32472116 1794916 1411526..1414822 1 NC_005027.1 best DB hits: PFAM: PF00034; Cytochrome c; E=8.2e-05; hypothetical protein 1414822 1794916 RB2711 Rhodopirellula baltica SH 1 hypothetical protein NP_865110.1 1411526 D 243090 CDS NP_865111.1 32472117 1791151 complement(1414909..1415817) 1 NC_005027.1 PMID: 12024217 best DB hits: BLAST: pir:S62202; hypothetical protein 1 - Methanosarcina barkeri -----; E=0.003 pir:H82720; outer membrane protein XF1123 [imported] - Xylella; E=0.008 swissprot:Q57099; PP26_BRUME 26 KDA PERIPLASMIC IMMUNOGENIC; E=0.093 COG: XF1123; COG2968 Uncharacterized BCR; E=8e-04; hypothetical protein 1415817 1791151 RB2714 Rhodopirellula baltica SH 1 hypothetical protein NP_865111.1 1414909 R 243090 CDS NP_865112.1 32472118 1792704 complement(1415913..1416470) 1 NC_005027.1 PMID: 10391943 best DB hits: BLAST: gb:AAD15447.1; (AC006068) unknown protein [Arabidopsis thaliana]; E=8e-21 gb:AAF56179.1; (AE003744) CG10371 gene product [Drosophila; E=3e-17 ddbj:BAB09879.1; (AB013392) contains similarity to unknown; E=4e-16 COG: PH1732; COG2453 Predicted protein-tyrosine phosphatase; E=3e-10 PFAM: PF00782; Dual specificity phosphatase, cataly; E=1.3e-08; dual specificity phosphatase MKP-5 1416470 1792704 RB2717 Rhodopirellula baltica SH 1 dual specificity phosphatase MKP-5 NP_865112.1 1415913 R 243090 CDS NP_865113.1 32472119 1793786 complement(1416467..1417891) 1 NC_005027.1 PMID: 8487301 best DB hits: BLAST: swissprot:P14218; DLDH_PSEFL DIHYDROLIPOAMIDE DEHYDROGENASE (E3; E=1e-108 pdb:1LPF; A Chain A, Dihydrolipoamide Dehydrogenase (E.C.1.8.1.4); E=1e-108 pir:A45796; dihydrolipoamide dehydrogenase (EC 1.8.1.4) -; E=1e-108 COG: PA1587; COG1249 Dihydrolipoamide dehydrogenase/glutathione; E=1e-109 PFAM: PF00070; Pyridine nucleotide-disulphide; E=1.5e-94 PF02852; Pyridine nucleotide-disulphide; E=5.8e-55; dihydrolipoamide dehydrogenase 1417891 dldH 1793786 dldH Rhodopirellula baltica SH 1 dihydrolipoamide dehydrogenase NP_865113.1 1416467 R 243090 CDS NP_865114.1 32472120 1795604 1417897..1418148 1 NC_005027.1 hypothetical protein 1418148 1795604 RB2719 Rhodopirellula baltica SH 1 hypothetical protein NP_865114.1 1417897 D 243090 CDS NP_865115.1 32472121 1792780 complement(1418200..1418964) 1 NC_005027.1 signal peptide 1418964 1792780 RB2720 Rhodopirellula baltica SH 1 signal peptide NP_865115.1 1418200 R 243090 CDS NP_865116.1 32472122 1790592 complement(1419017..1419817) 1 NC_005027.1 hypothetical protein 1419817 1790592 RB2724 Rhodopirellula baltica SH 1 hypothetical protein NP_865116.1 1419017 R 243090 CDS NP_865117.1 32472123 1793565 complement(1419868..1421151) 1 NC_005027.1 PMID: 2824445 best DB hits: BLAST: swissprot:P10441; LPXB_ECOLI LIPID-A-DISACCHARIDE SYNTHASE -----; E=6e-31 pir:A82101; lipid-A-disaccharide synthase VC2247 [imported] - Vibrio; E=1e-30 pir:SYECLA; lipid-A-disaccharide synthase (EC 2.4.1.182) -; E=2e-30 COG: VC2247; COG0763 Lipid A disaccharide synthetase; E=1e-31 PFAM: PF02684; Lipid-A-disaccharide syntheta; E=1.3e-37; lipid-A-disaccharide synthase 1421151 lpxB 1793565 lpxB Rhodopirellula baltica SH 1 lipid-A-disaccharide synthase NP_865117.1 1419868 R 243090 CDS NP_865118.1 32472124 1795656 1421143..1421313 1 NC_005027.1 hypothetical protein 1421313 1795656 RB2726 Rhodopirellula baltica SH 1 hypothetical protein NP_865118.1 1421143 D 243090 CDS NP_865119.1 32472125 1793328 1421291..1423312 1 NC_005027.1 PMID: 8552028 best DB hits: BLAST: pir:D82244; sensory box sensor histidine kinase VC1084 [imported] -; E=4e-15 ddbj:BAB05639.1; (AP001513) two-component sensor histidine kinase; E=1e-13 pir:S60595; FixL protein - Rhizobium leguminosarum ----- gb:; E=3e-13 COG: VC1084; COG0642 Sensory transduction histidine kinases; E=3e-16 PFAM: PF00672; HAMP domain; E=2.9e-10 PF00512; His Kinase A (phosphoacceptor) doma; E=3.2e-08 PF02518; Histidine kinase-, DNA gyrase B-, p; E=7.9e-33; two-component sensor histidine kinase FixL 1423312 1793328 RB2728 Rhodopirellula baltica SH 1 two-component sensor histidine kinase FixL NP_865119.1 1421291 D 243090 CDS NP_865120.1 32472126 1795307 1423176..1424672 1 NC_005027.1 PMID: 8346225 best DB hits: BLAST: swissprot:Q06065; ATOC_ECOLI ACETOACETATE METABOLISM REGULATORY; E=5e-83 gb:AAC28085.1; (AF100457) response regulator [Myxococcus xanthus]; E=2e-81 swissprot:Q00934; PILR_PSEAE TYPE 4 FIMBRIAE EXPRESSION REGULATORY; E=4e-79 COG: atoC; COG2204 AAA superfamily ATPases with N-terminal receiver; E=4e-84 VC2137; COG1221 NtrC family transcriptional regulators, ATPase; E=5e-67 PFAM: PF00072; Response regulator receiver doma; E=4.1e-28 PF00158; Sigma-54 interaction domain; E=4.8e-131; acetoacetate metabolism regulatory protein atoC 1424672 1795307 RB2731 Rhodopirellula baltica SH 1 acetoacetate metabolism regulatory protein atoC NP_865120.1 1423176 D 243090 CDS NP_865121.1 32472127 1795057 1424676..1426343 1 NC_005027.1 PMID: 11181566 best DB hits: BLAST: gb:AAG41945.1; AF304053_1 (AF304053) heparan N-sulfatase [Mus; E=9e-29 gb:AAF29467.1; (AF156255) N-sulfoglucosamine sulfohydrolase [Mus; E=2e-28 gb:AAG41946.1; AF304054_1 (AF304054) mutant heparan N-sulfatase; E=3e-28 COG: Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=9e-29 TM1703; COG1368 Phosphoglycerol transferase and related proteins,; E=2e-04 yejM; COG3083 Predicted hydrolase of alkaline phosphatase; E=0.001 PFAM: PF00884; Sulfatase; E=2.2e-23; heparan N-sulfatase 1426343 1795057 RB2732 Rhodopirellula baltica SH 1 heparan N-sulfatase NP_865121.1 1424676 D 243090 CDS NP_865122.1 32472128 1791208 complement(1426595..1428049) 1 NC_005027.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 1428049 g6pD 1791208 g6pD Rhodopirellula baltica SH 1 glucose-6-phosphate 1-dehydrogenase NP_865122.1 1426595 R 243090 CDS NP_865123.1 32472129 1797113 complement(1428178..1429320) 1 NC_005027.1 hypothetical protein 1429320 1797113 RB2737 Rhodopirellula baltica SH 1 hypothetical protein NP_865123.1 1428178 R 243090 CDS NP_865124.1 32472130 1791452 complement(1429331..1429564) 1 NC_005027.1 hypothetical protein 1429564 1791452 RB2739 Rhodopirellula baltica SH 1 hypothetical protein NP_865124.1 1429331 R 243090 CDS NP_865125.1 32472131 1796727 complement(1429648..1430028) 1 NC_005027.1 best DB hits: BLAST: gb:AAF60349.1; AF242549_1 (AF242549) DNA-dependent RNA polymerase; E=0.22; DNA-dependent RNA polymerase beta subunit 1430028 1796727 RB2740 Rhodopirellula baltica SH 1 DNA-dependent RNA polymerase beta subunit NP_865125.1 1429648 R 243090 CDS NP_865126.1 32472132 1796726 complement(1429994..1430170) 1 NC_005027.1 hypothetical protein 1430170 1796726 RB2741 Rhodopirellula baltica SH 1 hypothetical protein NP_865126.1 1429994 R 243090 CDS NP_865127.1 32472133 1791170 1430412..1431044 1 NC_005027.1 PMID: 8501030 best DB hits: BLAST: embl:CAA75536.1; (Y15252) nitratenitrite regulatory protein; E=3e-25 embl:CAB59507.1; (AL132648) two-component response; E=4e-25 pir:F83160; two-component response regulator NarL PA3879 [imported]; E=4e-25 COG: PA3879; COG2197 Response regulators consisting of a CheY-like; E=4e-26 narP; COG2197 Response regulators consisting of a CheY-like receiver; E=9e-23 DR0891; COG2197 Response regulators consisting of a CheY-like; E=1e-22 PFAM: PF00072; Response regulator receiver doma; E=7.4e-26 PF00325; Bacterial regulatory proteins, c; E=0.038 PF01381; Helix-turn-helix; E=0.45; nitrate/nitrite regulatory protein narP 1431044 1791170 RB2743 Rhodopirellula baltica SH 1 nitrate/nitrite regulatory protein narP NP_865127.1 1430412 D 243090 CDS NP_865128.1 32472134 1795222 1431060..1431278 1 NC_005027.1 hypothetical protein 1431278 1795222 RB2744 Rhodopirellula baltica SH 1 hypothetical protein NP_865128.1 1431060 D 243090 CDS NP_865129.1 32472135 1790306 1431275..1431400 1 NC_005027.1 hypothetical protein 1431400 1790306 RB2745 Rhodopirellula baltica SH 1 hypothetical protein NP_865129.1 1431275 D 243090 CDS NP_865130.1 32472136 1795034 1431502..1432446 1 NC_005027.1 PMID: 8098035 best DB hits: BLAST: swissprot:Q57695; DAPA_METJA DIHYDRODIPICOLINATE SYNTHASE (DHDPS); E=5e-68 swissprot:O67216; DAPA_AQUAE DIHYDRODIPICOLINATE SYNTHASE (DHDPS); E=5e-66 swissprot:Q04796; DAPA_BACSU DIHYDRODIPICOLINATE SYNTHASE (DHDPS); E=5e-58 COG: MJ0244; COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate; E=5e-69 PFAM: PF00701; Dihydrodipicolinate synthetase famil; E=4.6e-119; dihydrodipicolinate synthase 1432446 dapA 1795034 dapA Rhodopirellula baltica SH 1 dihydrodipicolinate synthase NP_865130.1 1431502 D 243090 CDS NP_865131.1 32472137 1795205 1432443..1432685 1 NC_005027.1 hypothetical protein 1432685 1795205 RB2747 Rhodopirellula baltica SH 1 hypothetical protein NP_865131.1 1432443 D 243090 CDS NP_865132.1 32472138 1790883 complement(1432641..1433804) 1 NC_005027.1 PMID: 9537320 best DB hits: BLAST: pir:D70357; conserved hypothetical protein aq_648 - Aquifex aeolicus; E=2e-86 ddbj:BAB07130.1; (AP001518) BH3411~unknown conserved protein in; E=7e-81 embl:CAB92115.1; (AL356334) conserved hypothetical protein; E=2e-75 COG: aq_648; COG1060 Thiamine biosynthesis enzyme ThiH and related; E=2e-87; hypothetical protein 1433804 1790883 RB2748 Rhodopirellula baltica SH 1 hypothetical protein NP_865132.1 1432641 R 243090 CDS NP_865133.1 32472139 1796687 complement(1433866..1434783) 1 NC_005027.1 PMID: 1644192 best DB hits: BLAST: gb:AAB41844.1; (U61168) 4-hydroxybenzoate octaprenyltransferase; E=3e-34 ddbj:BAB05369.1; (AP001512) 4-hydroxybenzoate; E=4e-34 pir:E70304; 4-hydroxybenzoate octaprenyltransferase - Aquifex; E=2e-31 COG: BH1650; COG0382 4-hydroxybenzoate polyprenyltranferase; E=4e-35 AF2036; COG0109 Polyprenyltransferase (cytochrome oxidase assembly; E=0.006 PFAM: PF01040; UbiA prenyltransferase; E=2e-37; 4-hydroxybenzoate octaprenyltransferase 1434783 ubiA 1796687 ubiA Rhodopirellula baltica SH 1 4-hydroxybenzoate octaprenyltransferase NP_865133.1 1433866 R 243090 CDS NP_865134.1 32472140 1795163 complement(1434797..1435465) 1 NC_005027.1 PMID: 3040734 best DB hits: BLAST: ddbj:BAB05370.1; (AP001512) 3-octaprenyl-4-hydroxybenzoate; E=2e-39 pir:H83144; probable aromatic acid decarboxylase PA4019 [imported] -; E=1e-37 gb:AAB41845.1; (U61168) 3-octaprenyl-4-hydroxybenzoate; E=2e-35 COG: BH1651; COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase; E=1e-40 PFAM: PF02441; Flavoprotein; E=6.5e-28; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1435465 ubiX 1795163 ubiX Rhodopirellula baltica SH 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NP_865134.1 1434797 R 243090 CDS NP_865135.1 32472141 1795092 complement(1435462..1436415) 1 NC_005027.1 PMID: 9045837 best DB hits: BLAST: pir:F75277; ubiquinonemenaquinone biosynthesis methyltransferase -; E=2e-44 ddbj:BAB05368.1; (AP001512) 2-heptaprenyl-1,4-naphthoquinone; E=9e-43 ddbj:BAA25267.1; (AB003188) 2-hexaprenyl-1,4-naphthoquinone; E=3e-41 COG: DR2405; COG2226 Methylase involved in ubiquinone/menaquinone; E=2e-45 slr0407; COG0500 SAM-dependent methyltransferases; E=7e-10 PFAM: PF01209; ubiE/COQ5 methyltransferase f; E=2.7e-66; ubiquinone/menaquinone biosynthesis methyltransferase 1436415 ubiE 1795092 ubiE Rhodopirellula baltica SH 1 ubiquinone/menaquinone biosynthesis methyltransferase NP_865135.1 1435462 R 243090 CDS NP_865136.1 32472142 1795020 1436382..1437071 1 NC_005027.1 PMID: 9371463 PMID: 7603433 best DB hits: BLAST: pir:E69106; hypothetical protein MTH1793 - Methanobacterium; E=3e-05 pir:T44528; phosphoglycolate phosphatase (EC 3.1.3.18) [imported] -; E=3e-04 gb:AAG42459.1; AF308467_5 (AF308467) Gph [Klebsiella aerogenes]; E=3e-04 COG: MTH1793; COG0546 Predicted phosphatases; E=3e-06 PFAM: PF00702; haloacid dehalogenase-like hydrolas; E=1.1e-16; phosphoglycolate phosphatase 1437071 1795020 RB2754 Rhodopirellula baltica SH 1 phosphoglycolate phosphatase NP_865136.1 1436382 D 243090 CDS NP_865137.1 32472143 1796189 1437336..1438115 1 NC_005027.1 PMID: 1447140 PMID: 9742696 best DB hits: BLAST: gb:AAD40344.1; U88088_22 (U88088) OmpA [Pseudomonas alcaligenes]; E=5e-08 swissprot:Q10557; Y899_MYCTU HYPOTHETICAL 33.6 KDA PROTEIN RV0899; E=3e-07 gb:AAD39495.1; AF145799_1 (AF145799) immunogenic 23 kDa; E=1e-06 COG: Rv0899; COG2885 Outer membrane protein and related; E=2e-08 aq_1002; COG1360 Flagellar motor protein; E=2e-07 XF0363; COG2885 Outer membrane protein and related; E=1e-05 PFAM: PF01486; K-box region; E=0.5 PF00691; OmpA family; E=4.9e-06; outer membrane protein OmpA 1438115 1796189 RB2761 Rhodopirellula baltica SH 1 outer membrane protein OmpA NP_865137.1 1437336 D 243090 CDS NP_865138.1 32472144 1795199 complement(1438190..1439626) 1 NC_005027.1 signal peptide 1439626 1795199 RB2763 Rhodopirellula baltica SH 1 signal peptide NP_865138.1 1438190 R 243090 CDS NP_865139.1 32472145 1793956 complement(1439630..1442155) 1 NC_005027.1 signal peptide 1442155 1793956 RB2764 Rhodopirellula baltica SH 1 signal peptide NP_865139.1 1439630 R 243090 CDS NP_865140.1 32472146 1794521 complement(1442289..1443728) 1 NC_005027.1 best DB hits: BLAST: pir:C83140; hypothetical protein PA4048 [imported] - Pseudomonas; E=2e-04 swissprot:Q9ZC99; Y867_RICPR HYPOTHETICAL PROTEIN RP867 -----; E=0.003 swissprot:P29938; YCBV_PSEDE HYPOTHETICAL 25.1 KDA PROTEIN IN COBV; E=0.007; hypothetical protein 1443728 1794521 RB2771 Rhodopirellula baltica SH 1 hypothetical protein NP_865140.1 1442289 R 243090 CDS NP_865141.1 32472147 1794119 1443786..1444034 1 NC_005027.1 best DB hits: BLAST: pir:E64732; yacG protein - Escherichia coli (strain K-12) -----; E=9e-08 gb:AAK02173.1; (AE006044) unknown [Pasteurella multocida]; E=8e-05 pir:E82078; conserved hypothetical protein VC2429 [imported] -; E=2e-04 COG: yacG; COG3024 Uncharacterized BCR; E=9e-09; hypothetical protein 1444034 1794119 RB2774 Rhodopirellula baltica SH 1 hypothetical protein NP_865141.1 1443786 D 243090 CDS NP_865142.1 32472148 1794133 1444306..1444785 1 NC_005027.1 PMID: 7854424 best DB hits: BLAST: pir:E81447; transcription elongation factor Cj0287c [imported] -; E=1e-27 swissprot:P43881; GREA_HAEIN TRANSCRIPTION ELONGATION FACTOR GREA; E=3e-27 gb:AAK02799.1; (AE006109) GreA [Pasteurella multocida]; E=4e-27 COG: Cj0287c; COG0782 Transcription elongation factor; E=1e-28 PFAM: PF01272; Prokaryotic transcription elongatio; E=2.6e-47; transcription elongation factor greA 1444785 greA 1794133 greA Rhodopirellula baltica SH 1 transcription elongation factor greA NP_865142.1 1444306 D 243090 CDS NP_865143.1 32472149 1791560 1444782..1445540 1 NC_005027.1 hypothetical protein 1445540 1791560 RB2781 Rhodopirellula baltica SH 1 hypothetical protein NP_865143.1 1444782 D 243090 CDS NP_865144.1 32472150 1793841 1445576..1447345 1 NC_005027.1 hypothetical protein 1447345 1793841 RB2782 Rhodopirellula baltica SH 1 hypothetical protein NP_865144.1 1445576 D 243090 CDS NP_865145.1 32472151 1795649 complement(1447454..1448065) 1 NC_005027.1 best DB hits: PFAM: PF01957; Protein of unknown function DUF107; E=0.0039; hypothetical protein 1448065 1795649 RB2784 Rhodopirellula baltica SH 1 hypothetical protein NP_865145.1 1447454 R 243090 CDS NP_865146.1 32472152 1790541 complement(1448062..1450374) 1 NC_005027.1 PMID: 10484179 best DB hits: BLAST: ddbj:BAB05075.1; (AP001511) BH1356~unknown conserved protein; E=4e-10 swissprot:P54465; YQEZ_BACSU HYPOTHETICAL 46.5 KD PROTEIN IN; E=4e-08 COG: BS_yqeZ_1; COG1030 Periplasmic serine proteases (ClpP class); E=2e-06 BH1356_2; COG1585 Membrane protein implicated in regulation of; E=8e-06 PFAM: PF01957; Protein of unknown function DUF107; E=0.00013; hypothetical protein 1450374 1790541 RB2785 Rhodopirellula baltica SH 1 hypothetical protein NP_865146.1 1448062 R 243090 CDS NP_865147.1 32472153 1793694 complement(1450448..1451896) 1 NC_005027.1 PMID: 8920929 best DB hits: BLAST: swissprot:Q10901; EAT1_CAEEL EXCITATORY AMINO ACID TRANSPORTER; E=3e-53 pir:T29633; hypothetical protein C12D12.2 - Caenorhabditis elegans; E=8e-53 gb:AAB41909.1; (U35250) CeGlt-2 [Caenorhabditis elegans]; E=1e-52 COG: aq_1330; COG1301 Na+/H+-dicarboxylate symporters; E=5e-49 PFAM: PF00375; Sodium:dicarboxylate symporter fami; E=5.2e-115; excitatory amino acid transporter 1451896 1793694 RB2788 Rhodopirellula baltica SH 1 excitatory amino acid transporter NP_865147.1 1450448 R 243090 CDS NP_865148.1 32472154 1793573 1451914..1453692 1 NC_005027.1 hypothetical protein 1453692 1793573 RB2789 Rhodopirellula baltica SH 1 hypothetical protein NP_865148.1 1451914 D 243090 CDS NP_865149.1 32472155 1795526 complement(1453732..1454757) 1 NC_005027.1 PMID: 9665719 best DB hits: BLAST: gb:AAC64266.1; (AF059612) deoxyribonuclease gamma [Xenopus; E=1e-19 gb:AAB00496.1; (L40823) DNL1L gene product [Homo sapiens]; E=5e-17 gb:AAB17022.1; (U06846) XIB [Homo sapiens]; E=7e-17 PFAM: PF01181; Deoxyribonuclease I (DNase I); E=1.3e-10; deoxyribonuclease gamma [precursor] 1454757 1795526 RB2794 Rhodopirellula baltica SH 1 deoxyribonuclease gamma [precursor] NP_865149.1 1453732 R 243090 CDS NP_865150.1 32472156 1794806 1454726..1455370 1 NC_005027.1 hypothetical protein 1455370 1794806 RB2795 Rhodopirellula baltica SH 1 hypothetical protein NP_865150.1 1454726 D 243090 CDS NP_865151.1 32472157 1792455 1455237..1456379 1 NC_005027.1 PMID: 8063110 best DB hits: BLAST: swissprot:Q57142; C554_NITEU CYTOCHROME C-554 PRECURSOR (C554); E=0.003 pdb:1FT5; A Chain A, Crystal Structure Of The Oxidized State Of; E=0.003; cytochrome c-554 [precursor] 1456379 1792455 RB2797 Rhodopirellula baltica SH 1 cytochrome c-554 [precursor] NP_865151.1 1455237 D 243090 CDS NP_865152.1 32472158 1793482 complement(1456351..1457280) 1 NC_005027.1 PMID: 9298659 best DB hits: BLAST: swissprot:P80874; GS69_BACSU GENERAL STRESS PROTEIN 69 (GSP69); E=6e-29 pir:C83506; probable oxidoreductase PA1127 [imported] - Pseudomonas; E=6e-23 pir:H83328; probable oxidoreductase PA2535 [imported] - Pseudomonas; E=7e-20 COG: BS_yhdN; COG0667 Predicted oxidoreductases (related to aryl-alcohol; E=6e-30 TM1743; COG0656 Aldo/keto reductases, related to diketogulonate; E=3e-07 XF0367; COG0667 Predicted oxidoreductases (related to aryl-alcohol; E=4e-07 PFAM: PF00248; Aldo/keto reductase; E=1.3e-12; general stress protein 69 1457280 1793482 RB2799 Rhodopirellula baltica SH 1 general stress protein 69 NP_865152.1 1456351 R 243090 CDS NP_865153.1 32472159 1791448 1457396..1457911 1 NC_005027.1 hypothetical protein 1457911 1791448 RB2801 Rhodopirellula baltica SH 1 hypothetical protein NP_865153.1 1457396 D 243090 CDS NP_865154.1 32472160 1794599 complement(1458040..1458645) 1 NC_005027.1 hypothetical protein 1458645 1794599 RB2804 Rhodopirellula baltica SH 1 hypothetical protein NP_865154.1 1458040 R 243090 CDS NP_865155.1 32472161 1792759 1458677..1458802 1 NC_005027.1 hypothetical protein 1458802 1792759 RB2806 Rhodopirellula baltica SH 1 hypothetical protein NP_865155.1 1458677 D 243090 CDS NP_865156.1 32472162 1793744 complement(1458786..1459043) 1 NC_005027.1 signal peptide 1459043 1793744 RB2807 Rhodopirellula baltica SH 1 signal peptide NP_865156.1 1458786 R 243090 CDS NP_865157.1 32472163 1793342 complement(1459065..1459745) 1 NC_005027.1 PMID: 11759840 best DB hits: BLAST: pir:T14004; trfA protein - slime mold (Dictyostelium discoideum); E=0.45 PFAM: PF00515; TPR Domain; E=0.00018; trfA protein 1459745 1793342 RB2809 Rhodopirellula baltica SH 1 trfA protein NP_865157.1 1459065 R 243090 CDS NP_865158.1 32472164 1792447 complement(1459752..1459901) 1 NC_005027.1 hypothetical protein 1459901 1792447 RB2810 Rhodopirellula baltica SH 1 hypothetical protein NP_865158.1 1459752 R 243090 CDS NP_865159.1 32472165 1795060 1459843..1461255 1 NC_005027.1 hypothetical protein 1461255 1795060 RB2812 Rhodopirellula baltica SH 1 hypothetical protein NP_865159.1 1459843 D 243090 CDS NP_865160.1 32472166 1791847 complement(1461425..1462903) 1 NC_005027.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 1462903 6pgD 1791847 6pgD Rhodopirellula baltica SH 1 6-phosphogluconate dehydrogenase NP_865160.1 1461425 R 243090 CDS NP_865161.1 32472167 1791076 complement(1462893..1463057) 1 NC_005027.1 hypothetical protein 1463057 1791076 RB2818 Rhodopirellula baltica SH 1 hypothetical protein NP_865161.1 1462893 R 243090 CDS NP_865162.1 32472168 1795923 1463064..1463360 1 NC_005027.1 hypothetical protein 1463360 1795923 RB2819 Rhodopirellula baltica SH 1 hypothetical protein NP_865162.1 1463064 D 243090 CDS NP_865163.1 32472169 1790023 1463434..1464933 1 NC_005027.1 hypothetical protein 1464933 1790023 RB2822 Rhodopirellula baltica SH 1 hypothetical protein NP_865163.1 1463434 D 243090 CDS NP_865164.1 32472170 1790132 1464940..1465833 1 NC_005027.1 PMID: 8012593 best DB hits: BLAST: ddbj:BAB07419.1; (AP001519) glycerophosphoryl diester; E=3e-22 pir:E69827; glycerophosphodiester phosphodiesterase homolog yhdW -; E=5e-21 embl:CAC16430.1; (AL450165) secreted hydrolase; E=5e-16 COG: BH3700; COG0584 Glycerophosphoryl diester phosphodiesterase; E=3e-23; glycerophosphoryl diester phosphodiesterase 1465833 ugpQ 1790132 ugpQ Rhodopirellula baltica SH 1 glycerophosphoryl diester phosphodiesterase NP_865164.1 1464940 D 243090 CDS NP_865165.1 32472171 1794908 complement(1465865..1467310) 1 NC_005027.1 hypothetical protein 1467310 1794908 RB2826 Rhodopirellula baltica SH 1 hypothetical protein NP_865165.1 1465865 R 243090 CDS NP_865166.1 32472172 1791283 1467281..1467451 1 NC_005027.1 hypothetical protein 1467451 1791283 RB2828 Rhodopirellula baltica SH 1 hypothetical protein NP_865166.1 1467281 D 243090 CDS NP_865167.1 32472173 1792687 1467448..1467564 1 NC_005027.1 hypothetical protein 1467564 1792687 RB2829 Rhodopirellula baltica SH 1 hypothetical protein NP_865167.1 1467448 D 243090 CDS NP_865168.1 32472174 1795420 1467628..1468854 1 NC_005027.1 signal peptide 1468854 1795420 RB2830 Rhodopirellula baltica SH 1 signal peptide NP_865168.1 1467628 D 243090 CDS NP_865169.1 32472175 1791778 complement(1468887..1469096) 1 NC_005027.1 hypothetical protein 1469096 1791778 RB2832 Rhodopirellula baltica SH 1 hypothetical protein NP_865169.1 1468887 R 243090 CDS NP_865170.1 32472176 1797067 1469084..1470472 1 NC_005027.1 PMID: 10484179 best DB hits: BLAST: ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=2e-09 ddbj:BAB05884.1; (AP001514) BH2165~unknown conserved protein; E=6e-09 ddbj:BAB04429.1; (AP001509) BH0710~unknown conserved protein; E=1e-07 COG: BH1248; COG0673 Predicted dehydrogenases and related proteins; E=2e-10 PFAM: PF01408; Oxidoreductase, NAD-bin; E=5.1e-18; NADH-dependent dyhydrogenase 1470472 1797067 RB2833 Rhodopirellula baltica SH 1 NADH-dependent dyhydrogenase NP_865170.1 1469084 D 243090 CDS NP_865171.1 32472177 1791328 1470531..1472375 1 NC_005027.1 best DB hits: PFAM: PF01011; PQQ enzyme repeat; E=0.14; hypothetical protein 1472375 1791328 RB2837 Rhodopirellula baltica SH 1 hypothetical protein NP_865171.1 1470531 D 243090 CDS NP_865172.1 32472178 1792878 1472478..1472798 1 NC_005027.1 hypothetical protein 1472798 1792878 RB2838 Rhodopirellula baltica SH 1 hypothetical protein NP_865172.1 1472478 D 243090 CDS NP_865173.1 32472179 1796301 1472838..1473710 1 NC_005027.1 PMID: 10952301 best DB hits: BLAST: pir:G82190; conserved hypothetical protein VC1503 [imported] -; E=5e-59 pir:H83504; hypothetical protein PA1116 [imported] - Pseudomonas; E=2e-57 ddbj:BAB05048.1; (AP001511) BH1329~unknown conserved protein in; E=2e-17 COG: VC1503; COG2996 Uncharacterized BCR; E=5e-60; hypothetical protein 1473710 1796301 RB2839 Rhodopirellula baltica SH 1 hypothetical protein NP_865173.1 1472838 D 243090 CDS NP_865174.1 32472180 1790796 1473891..1474409 1 NC_005027.1 PMID: 7579621 best DB hits: BLAST: swissprot:P46358; RFAY_XANCP PROBABLE RNA POLYMERASE SIGMA FACTOR; E=0.001 swissprot:Q44583; NCCH_ALCXX RNA POLYMERASE SIGMA FACTOR NCCH; E=0.11 embl:CAB65647.1; (AL136149) probable ECF-family sigma factor.; E=0.14 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=1.8e-11; RNA polymerase sigma factor nccH 1474409 1790796 RB2840 Rhodopirellula baltica SH 1 RNA polymerase sigma factor nccH NP_865174.1 1473891 D 243090 CDS NP_865175.1 32472181 1791920 1474406..1476130 1 NC_005027.1 hypothetical protein 1476130 1791920 RB2842 Rhodopirellula baltica SH 1 hypothetical protein NP_865175.1 1474406 D 243090 CDS NP_865176.1 32472182 1796701 1476069..1478816 1 NC_005027.1 hypothetical protein 1478816 1796701 RB2845 Rhodopirellula baltica SH 1 hypothetical protein NP_865176.1 1476069 D 243090 CDS NP_865177.1 32472183 1794435 1478879..1480288 1 NC_005027.1 sulfatase 1480288 1794435 RB2848 Rhodopirellula baltica SH 1 sulfatase NP_865177.1 1478879 D 243090 CDS NP_865178.1 32472184 1792425 complement(1480307..1480933) 1 NC_005027.1 PMID: 9359865 best DB hits: BLAST: gb:AAB89115.1; (AE000956) thioredoxin (trx-4) [Archaeoglobus; E=2e-07 pir:G82991; thioredoxin PA5240 [imported] - Pseudomonas aeruginosa; E=5e-07 pir:S46921; thioredoxin homolog - Mycoplasma capricolum (SGC3); E=2e-06 COG: AF2144; COG0526 Thiol-disulfide isomerase and thioredoxins; E=2e-08 PA4061; COG3118 Thioredoxin domain-containing protein; E=3e-04 BS_ydbP; COG0526 Thiol-disulfide isomerase and thioredoxins; E=3e-04 PFAM: PF00085; Thioredoxin; E=0.062; thioredoxin 1480933 1792425 RB2849 Rhodopirellula baltica SH 1 thioredoxin NP_865178.1 1480307 R 243090 CDS NP_865179.1 32472185 1794314 complement(1481069..1481812) 1 NC_005027.1 hypothetical protein 1481812 1794314 RB2850 Rhodopirellula baltica SH 1 hypothetical protein NP_865179.1 1481069 R 243090 CDS NP_865180.1 32472186 1793310 1481951..1482067 1 NC_005027.1 hypothetical protein 1482067 1793310 RB2851 Rhodopirellula baltica SH 1 hypothetical protein NP_865180.1 1481951 D 243090 CDS NP_865181.1 32472187 1794982 complement(1482149..1482871) 1 NC_005027.1 best DB hits: PFAM: PF02517; CAAX amino terminal protease fa; E=0.0017; hypothetical protein 1482871 1794982 RB2852 Rhodopirellula baltica SH 1 hypothetical protein NP_865181.1 1482149 R 243090 CDS NP_865182.1 32472188 1794444 1482846..1482974 1 NC_005027.1 hypothetical protein 1482974 1794444 RB2853 Rhodopirellula baltica SH 1 hypothetical protein NP_865182.1 1482846 D 243090 CDS NP_865183.1 32472189 1790192 complement(1483049..1484464) 1 NC_005027.1 PMID: 9634230 best DB hits: BLAST: swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=8e-27 swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=2e-26 swissprot:P71585; PKNA_MYCTU SERINETHREONINE-PROTEIN; E=2e-25 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=7e-28 PFAM: PF00069; Protein kinase domain; E=6.2e-62; serine/threonine-protein kinase pknB 1484464 1790192 RB2855 Rhodopirellula baltica SH 1 serine/threonine-protein kinase pknB NP_865183.1 1483049 R 243090 CDS NP_865184.1 32472190 1795434 complement(1484442..1487675) 1 NC_005027.1 hypothetical protein 1487675 1795434 RB2856 Rhodopirellula baltica SH 1 hypothetical protein NP_865184.1 1484442 R 243090 CDS NP_865185.1 32472191 1795774 1487828..1489987 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:C75477; probable fimbrial assembly protein PilM - Deinococcus; E=1e-19 gb:AAK00347.1; AF329876_3 (AF329876) membrane protein; E=1e-06 pir:S75816; membrane protein pilM - Synechocystis sp. (strain PCC; E=8e-06 COG: DR0770; COG0849 Predicted ATPases of the HSP70 class involved in; E=1e-20; fimbrial assembly protein PilM 1489987 1795774 RB2860 Rhodopirellula baltica SH 1 fimbrial assembly protein PilM NP_865185.1 1487828 D 243090 CDS NP_865186.1 32472192 1796718 complement(1489967..1490074) 1 NC_005027.1 hypothetical protein 1490074 1796718 RB2863 Rhodopirellula baltica SH 1 hypothetical protein NP_865186.1 1489967 R 243090 CDS NP_865187.1 32472193 1796284 1490057..1491847 1 NC_005027.1 hypothetical protein 1491847 1796284 RB2864 Rhodopirellula baltica SH 1 hypothetical protein NP_865187.1 1490057 D 243090 CDS NP_865188.1 32472194 1792359 1491909..1494002 1 NC_005027.1 hypothetical protein 1494002 1792359 RB2867 Rhodopirellula baltica SH 1 hypothetical protein NP_865188.1 1491909 D 243090 CDS NP_865189.1 32472195 1792032 1494009..1495058 1 NC_005027.1 PMID: 12004073; hypothetical protein 1495058 1792032 RB2871 Rhodopirellula baltica SH 1 hypothetical protein NP_865189.1 1494009 D 243090 CDS NP_865190.1 32472196 1795658 complement(1495074..1497053) 1 NC_005027.1 PMID: 9278513 best DB hits: BLAST: gb:AAB89763.1; (AE001000) signal-transducing histidine kinase; E=3e-31 swissprot:Q9LCC2; PHYA_ANASP CYANOBACTERIAL PHYTOCHROME A -----; E=3e-28 swissprot:Q55168; PHY1_SYNY3 PHYTOCHROME-LIKE PROTEIN CPH1; E=1e-26 COG: slr0473_3; COG0642 Sensory transduction histidine kinases; E=1e-27 PFAM: PF00785; PAC motif; E=9.9e-06 PF00989; PAS domain; E=1.1e-07 PF00785; PAC motif; E=0.058; signal-transducing histidine kinase 1497053 1795658 RB2872 Rhodopirellula baltica SH 1 signal-transducing histidine kinase NP_865190.1 1495074 R 243090 CDS NP_865191.1 32472197 1791090 complement(1497050..1497319) 1 NC_005027.1 hypothetical protein 1497319 1791090 RB2874 Rhodopirellula baltica SH 1 hypothetical protein NP_865191.1 1497050 R 243090 CDS NP_865192.1 32472198 1791932 1497313..1497534 1 NC_005027.1 hypothetical protein 1497534 1791932 RB2875 Rhodopirellula baltica SH 1 hypothetical protein NP_865192.1 1497313 D 243090 CDS NP_865193.1 32472199 1796784 1497480..1497659 1 NC_005027.1 hypothetical protein 1497659 1796784 RB2877 Rhodopirellula baltica SH 1 hypothetical protein NP_865193.1 1497480 D 243090 CDS NP_865194.1 32472200 1791918 1497670..1498329 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB75999.1; (AL157916) hypothetical protein [Streptomyces; E=4e-10 pir:G70571; hypothetical protein Rv2616 - Mycobacterium tuberculosis; E=1e-09 pir:D75322; conserved hypothetical protein - Deinococcus radiodurans; E=1e-08; hypothetical protein 1498329 1791918 RB2878 Rhodopirellula baltica SH 1 hypothetical protein NP_865194.1 1497670 D 243090 CDS NP_865195.1 32472201 1792969 complement(1498390..1499469) 1 NC_005027.1 PMID: 7934835 best DB hits: BLAST: pir:T29905; hypothetical protein F59A3.4 - Caenorhabditis elegans; E=6e-52 pir:A75447; gufA protein - Deinococcus radiodurans (strain R1); E=1e-51 pir:A69162; gufA protein homolog MTH473 - Methanobacterium; E=1e-51 COG: DR1032; COG0428 Predicted divalent heavy-metal cations transporter; E=1e-52; gufA protein 1499469 1792969 RB2881 Rhodopirellula baltica SH 1 gufA protein NP_865195.1 1498390 R 243090 CDS NP_865196.1 32472202 1791404 1499497..1499859 1 NC_005027.1 hypothetical protein 1499859 1791404 RB2883 Rhodopirellula baltica SH 1 hypothetical protein NP_865196.1 1499497 D 243090 CDS NP_865197.1 32472203 1794057 1499820..1500890 1 NC_005027.1 PMID: 9427545 best DB hits: BLAST: embl:CAA66078.1; (X97448) galE [Brucella melitensis]; E=2e-07 gb:AAC46054.1; (U78089) UDP-glucose epimerase [Brucella abortus]; E=4e-07 pir:A70392; UDP-glucose-4-epimerase - Aquifex aeolicus ----- gb:; E=5e-06 COG: aq_1069; COG1087 UDP-glucose 4-epimerase; E=5e-07 aq_1335; COG0451 Nucleoside-diphosphate-sugar epimerases; E=2e-05 BS_galE; COG1087 UDP-glucose 4-epimerase; E=3e-05 PFAM: PF00106; short chain dehydrogenase; E=7.4e-05 PF01370; NAD dependent epimerase/dehydratase; E=0.0054; UDP-glucose epimerase 1500890 galE 1794057 galE Rhodopirellula baltica SH 1 UDP-glucose epimerase NP_865197.1 1499820 D 243090 CDS NP_865198.1 32472204 1791451 1500863..1501522 1 NC_005027.1 PMID: 10192388 best DB hits: BLAST: pir:B72102; conserved hypothetical protein CP0535 [imported] -; E=8e-04 pir:A71548; hypothetical protein CT178 - Chlamydia trachomatis; E=0.68 PFAM: PF00901; Orbivirus outer capsid protein VP5; E=0.16; hypothetical protein 1501522 1791451 RB2885 Rhodopirellula baltica SH 1 hypothetical protein NP_865198.1 1500863 D 243090 CDS NP_865199.1 32472205 1792165 1501522..1501878 1 NC_005027.1 hypothetical protein 1501878 1792165 RB2886 Rhodopirellula baltica SH 1 hypothetical protein NP_865199.1 1501522 D 243090 CDS NP_865200.1 32472206 1790602 1501869..1503068 1 NC_005027.1 PMID: 10852478 best DB hits: BLAST: embl:CAB67160.1; (AJ271079) ATP synthase alpha subunit [Oenothera; E=0.72; ATP synthase subunit alpha 1503068 1790602 RB2889 Rhodopirellula baltica SH 1 ATP synthase subunit alpha NP_865200.1 1501869 D 243090 CDS NP_865201.1 32472207 1795096 complement(1503130..1505238) 1 NC_005027.1 signal peptide 1505238 1795096 RB2893 Rhodopirellula baltica SH 1 signal peptide NP_865201.1 1503130 R 243090 CDS NP_865202.1 32472208 1796414 complement(1505235..1505741) 1 NC_005027.1 best DB hits: PFAM: PF02472; Biopolymer transport protein ExbD/To; E=0.005; signal peptide 1505741 1796414 RB2894 Rhodopirellula baltica SH 1 signal peptide NP_865202.1 1505235 R 243090 CDS NP_865203.1 32472209 1796673 complement(1505738..1506178) 1 NC_005027.1 PMID: 2670903 best DB hits: BLAST: pir:S74451; hypothetical protein sll1405 - Synechocystis sp. (strain; E=1e-08 swissprot:P18784; EXBD_ECOLI BIOPOLYMER TRANSPORT EXBD PROTEIN; E=4e-07 gb:AAC78852.1; (AF087669) ExbD [Bordetella bronchiseptica]; E=4e-06 COG: sll1405; COG0848 Biopolymer transport protein; E=1e-09 PFAM: PF02472; Biopolymer transport protein ExbD/To; E=1.1e-11; biopolymer transport exbD protein 1506178 1796673 RB2895 Rhodopirellula baltica SH 1 biopolymer transport exbD protein NP_865203.1 1505738 R 243090 CDS NP_865204.1 32472210 1794614 1506169..1506909 1 NC_005027.1 PMID: 10086841 best DB hits: BLAST: ddbj:BAB05775.1; (AP001514) BH2056~unknown conserved protein in; E=3e-20 pir:T45542; hypothetical protein [imported] - Klebsiella pneumoniae; E=8e-13 gb:AAG10237.1; AF201699_2 (AF201699) phospholipid; E=8e-08 COG: BH2056; COG0030 Dimethyladenosine transferase (rRNA methylation); E=2e-21 APE1011; COG2518 Protein-L-isoaspartate carboxylmethyltransferase; E=0.008; methyltransferase 1506909 1794614 RB2897 Rhodopirellula baltica SH 1 methyltransferase NP_865204.1 1506169 D 243090 CDS NP_865205.1 32472211 1790962 1506927..1507199 1 NC_005027.1 hypothetical protein 1507199 1790962 RB2900 Rhodopirellula baltica SH 1 hypothetical protein NP_865205.1 1506927 D 243090 CDS NP_865206.1 32472212 1793113 1507210..1508388 1 NC_005027.1 best DB hits: PFAM: PF00432; Prenyltransferase and squalene ox; E=0.6; signal peptide 1508388 1793113 RB2901 Rhodopirellula baltica SH 1 signal peptide NP_865206.1 1507210 D 243090 CDS NP_865207.1 32472213 1796722 1508728..1509531 1 NC_005027.1 PMID: 10484179 best DB hits: BLAST: ddbj:BAB03764.1; (AP001507) signal peptidase-like protein; E=5e-36 swissprot:P37541; YAAT_BACSU HYPOTHETICAL 31.2 KD PROTEIN IN; E=5e-36 gb:AAK04498.1; AE006276_13 (AE006276) HYPOTHETICAL PROTEIN; E=3e-28 COG: BH0045; COG1774 Uncharacterized ACR, PSP1 homologs; E=5e-37; signal peptidase-like protein 1509531 1796722 RB2905 Rhodopirellula baltica SH 1 signal peptidase-like protein NP_865207.1 1508728 D 243090 CDS NP_865208.1 32472214 1795924 1509575..1510000 1 NC_005027.1 hypothetical protein 1510000 1795924 RB2907 Rhodopirellula baltica SH 1 hypothetical protein NP_865208.1 1509575 D 243090 CDS NP_865209.1 32472215 1795824 1510001..1510930 1 NC_005027.1 PMID: 11029001 best DB hits: BLAST: embl:CAC11769.1; (AL445064) conserved hypothetical protein; E=5e-08 pir:F70426; conserved hypothetical protein aq_1457 - Aquifex; E=5e-06 pir:H70323; hypothetical protein aq_262 - Aquifex aeolicus -----; E=5e-05 COG: Ta0630; COG0500 SAM-dependent methyltransferases; E=5e-09 PFAM: PF02874; ATP synthase alpha/beta family; E=0.21 PF01135; Protein-L-isoaspartate(D-aspar; E=0.52; hypothetical protein 1510930 1795824 RB2908 Rhodopirellula baltica SH 1 hypothetical protein NP_865209.1 1510001 D 243090 CDS NP_865210.1 32472216 1794965 1511014..1511319 1 NC_005027.1 hypothetical protein 1511319 1794965 RB2910 Rhodopirellula baltica SH 1 hypothetical protein NP_865210.1 1511014 D 243090 CDS NP_865211.1 32472217 1792239 complement(1511297..1512238) 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB55658.1; (AL117385) lipoprotein [Streptomyces; E=0.033; lipoprotein 1512238 1792239 RB2912 Rhodopirellula baltica SH 1 lipoprotein NP_865211.1 1511297 R 243090 CDS NP_865212.1 32472218 1794838 1512416..1513744 1 NC_005027.1 signal peptide 1513744 1794838 RB2914 Rhodopirellula baltica SH 1 signal peptide NP_865212.1 1512416 D 243090 CDS NP_865213.1 32472219 1790596 1513765..1513959 1 NC_005027.1 hypothetical protein 1513959 1790596 RB2917 Rhodopirellula baltica SH 1 hypothetical protein NP_865213.1 1513765 D 243090 CDS NP_865214.1 32472220 1791556 complement(1513943..1514692) 1 NC_005027.1 hypothetical protein 1514692 1791556 RB2920 Rhodopirellula baltica SH 1 hypothetical protein NP_865214.1 1513943 R 243090 CDS NP_865215.1 32472221 1795899 1514631..1514783 1 NC_005027.1 hypothetical protein 1514783 1795899 RB2922 Rhodopirellula baltica SH 1 hypothetical protein NP_865215.1 1514631 D 243090 CDS NP_865216.1 32472222 1792151 1514780..1514887 1 NC_005027.1 hypothetical protein 1514887 1792151 RB2923 Rhodopirellula baltica SH 1 hypothetical protein NP_865216.1 1514780 D 243090 CDS NP_865217.1 32472223 1793383 complement(1515025..1515456) 1 NC_005027.1 signal peptide 1515456 1793383 RB2924 Rhodopirellula baltica SH 1 signal peptide NP_865217.1 1515025 R 243090 CDS NP_865218.1 32472224 1794574 complement(1515563..1515973) 1 NC_005027.1 signal peptide 1515973 1794574 RB2926 Rhodopirellula baltica SH 1 signal peptide NP_865218.1 1515563 R 243090 CDS NP_865219.1 32472225 1791982 1516044..1516208 1 NC_005027.1 hypothetical protein 1516208 1791982 RB2927 Rhodopirellula baltica SH 1 hypothetical protein NP_865219.1 1516044 D 243090 CDS NP_865220.1 32472226 1793530 complement(1516229..1516720) 1 NC_005027.1 PMID: 8892832 best DB hits: BLAST: gb:AAC44553.1; (U34346) unknown [Paracoccus denitrificans]; E=6e-33 embl:CAB61920.1; (AL133278) acetyltransferase; E=3e-28 swissprot:Q09927; YAL4_SCHPO HYPOTHETICAL 23.8 KD PROTEIN; E=6e-16 COG: BH2104; COG0456 Acetyltransferases; E=0.007 PFAM: PF00583; Acetyltransferase (GNAT) family; E=2.2e-16; acetyltransferase 1516720 1793530 RB2928 Rhodopirellula baltica SH 1 acetyltransferase NP_865220.1 1516229 R 243090 CDS NP_865221.1 32472227 1794811 complement(1516815..1517303) 1 NC_005027.1 hypothetical protein 1517303 1794811 RB2929 Rhodopirellula baltica SH 1 hypothetical protein NP_865221.1 1516815 R 243090 CDS NP_865222.1 32472228 1792851 complement(1517344..1517529) 1 NC_005027.1 hypothetical protein 1517529 1792851 RB2930 Rhodopirellula baltica SH 1 hypothetical protein NP_865222.1 1517344 R 243090 CDS NP_865223.1 32472229 1795502 complement(1517535..1518137) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: ddbj:BAB04418.1; (AP001509) ribosomal-protein-alanine; E=5e-15 ddbj:BAB05587.1; (AP001513) BH1868~unknown conserved protein; E=2e-14 pir:E83153; conserved hypothetical protein PA3945 [imported] -; E=2e-14 COG: BH0699; COG1670 Acetyltransferases, including N-acetylases of; E=5e-16 PFAM: PF00583; Acetyltransferase (GNAT) family; E=1.1e-14; acetyltransferase 1518137 1795502 RB2931 Rhodopirellula baltica SH 1 acetyltransferase NP_865223.1 1517535 R 243090 CDS NP_865224.1 32472230 1791538 complement(1518086..1518346) 1 NC_005027.1 hypothetical protein 1518346 1791538 RB2932 Rhodopirellula baltica SH 1 hypothetical protein NP_865224.1 1518086 R 243090 CDS NP_865225.1 32472231 1792082 complement(1518862..1519551) 1 NC_005027.1 PMID: 2144277 PMID: 10784042 PMID: 11481430 best DB hits: BLAST: swissprot:O67611; ACP_AQUAE ACYL CARRIER PROTEIN (ACP) -----; E=0.018 swissprot:P19372; ACP_RHIME ACYL CARRIER PROTEIN (ACP) -----; E=0.055 swissprot:Q9RG22; ACP_RHILE ACYL CARRIER PROTEIN (ACP) -----; E=0.064 COG: aq_1717a; COG0236 Acyl carrier protein; E=0.002 PFAM: PF00550; Phosphopantetheine attachment site; E=0.3; acyl carrier protein 1519551 1792082 RB2934 Rhodopirellula baltica SH 1 acyl carrier protein NP_865225.1 1518862 R 243090 CDS NP_865226.1 32472232 1793903 complement(1519684..1519908) 1 NC_005027.1 PMID: 8134129 best DB hits: BLAST: swissprot:P53356; HT16_HYDAT tyrosine-protein kinase -----; E=0.007 gb:AAF37305.1; AC005931_3 (AC005931) 6-PhosphoFructo-2-Kinase; E=0.008 gb:AAF58766.1; (AE003828) CG16728 gene product [Drosophila; E=0.009 PFAM: PF00023; Ank repeat; E=2.4e-08; tyrosine-protein kinase 1519908 1793903 RB2936 Rhodopirellula baltica SH 1 tyrosine-protein kinase NP_865226.1 1519684 R 243090 CDS NP_865227.1 32472233 1794922 complement(1519916..1520407) 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB66271.1; (AL136519) integral-membrane protein.; E=1e-06 embl:CAB72202.1; (AL138851) integral-membrane protein; E=5e-06; integral-membrane protein 1520407 1794922 RB2939 Rhodopirellula baltica SH 1 integral-membrane protein NP_865227.1 1519916 R 243090 CDS NP_865228.1 32472234 1792105 1520430..1520870 1 NC_005027.1 hypothetical protein 1520870 1792105 RB2940 Rhodopirellula baltica SH 1 hypothetical protein NP_865228.1 1520430 D 243090 CDS NP_865229.1 32472235 1795122 complement(1520821..1521297) 1 NC_005027.1 hypothetical protein 1521297 1795122 RB2941 Rhodopirellula baltica SH 1 hypothetical protein NP_865229.1 1520821 R 243090 CDS NP_865230.1 32472236 1793625 1521275..1521535 1 NC_005027.1 hypothetical protein 1521535 1793625 RB2943 Rhodopirellula baltica SH 1 hypothetical protein NP_865230.1 1521275 D 243090 CDS NP_865231.1 32472237 1792155 1521542..1521682 1 NC_005027.1 hypothetical protein 1521682 1792155 RB2945 Rhodopirellula baltica SH 1 hypothetical protein NP_865231.1 1521542 D 243090 CDS NP_865232.1 32472238 1791132 1521688..1521834 1 NC_005027.1 hypothetical protein 1521834 1791132 RB2946 Rhodopirellula baltica SH 1 hypothetical protein NP_865232.1 1521688 D 243090 CDS NP_865233.1 32472239 1796943 complement(1521903..1522349) 1 NC_005027.1 hypothetical protein 1522349 1796943 RB2948 Rhodopirellula baltica SH 1 hypothetical protein NP_865233.1 1521903 R 243090 CDS NP_865234.1 32472240 1795132 complement(1522460..1522972) 1 NC_005027.1 hypothetical protein 1522972 1795132 RB2949 Rhodopirellula baltica SH 1 hypothetical protein NP_865234.1 1522460 R 243090 CDS NP_865235.1 32472241 1791947 complement(1522929..1523081) 1 NC_005027.1 hypothetical protein 1523081 1791947 RB2950 Rhodopirellula baltica SH 1 hypothetical protein NP_865235.1 1522929 R 243090 CDS NP_865236.1 32472242 1793229 complement(1523092..1523616) 1 NC_005027.1 hypothetical protein 1523616 1793229 RB2951 Rhodopirellula baltica SH 1 hypothetical protein NP_865236.1 1523092 R 243090 CDS NP_865237.1 32472243 1796810 1523656..1523832 1 NC_005027.1 hypothetical protein 1523832 1796810 RB2952 Rhodopirellula baltica SH 1 hypothetical protein NP_865237.1 1523656 D 243090 CDS NP_865238.1 32472244 1790261 complement(1523812..1524120) 1 NC_005027.1 hypothetical protein 1524120 1790261 RB2953 Rhodopirellula baltica SH 1 hypothetical protein NP_865238.1 1523812 R 243090 CDS NP_865239.1 32472245 1791439 1524115..1524438 1 NC_005027.1 hypothetical protein 1524438 1791439 RB2955 Rhodopirellula baltica SH 1 hypothetical protein NP_865239.1 1524115 D 243090 CDS NP_865240.1 32472246 1792002 1524488..1524613 1 NC_005027.1 hypothetical protein 1524613 1792002 RB2956 Rhodopirellula baltica SH 1 hypothetical protein NP_865240.1 1524488 D 243090 CDS NP_865241.1 32472247 1795095 complement(1524625..1524816) 1 NC_005027.1 hypothetical protein 1524816 1795095 RB2957 Rhodopirellula baltica SH 1 hypothetical protein NP_865241.1 1524625 R 243090 CDS NP_865242.1 32472248 1796696 1524723..1524962 1 NC_005027.1 hypothetical protein 1524962 1796696 RB2958 Rhodopirellula baltica SH 1 hypothetical protein NP_865242.1 1524723 D 243090 CDS NP_865243.1 32472249 1795765 1524959..1526428 1 NC_005027.1 PMID: 9389475 best DB hits: PFAM: PF01011; PQQ enzyme repeat; E=0.12; hypothetical protein 1526428 1795765 RB2960 Rhodopirellula baltica SH 1 hypothetical protein NP_865243.1 1524959 D 243090 CDS NP_865244.1 32472250 1792156 complement(1526441..1526764) 1 NC_005027.1 hypothetical protein 1526764 1792156 RB2962 Rhodopirellula baltica SH 1 hypothetical protein NP_865244.1 1526441 R 243090 CDS NP_865245.1 32472251 1795072 1526707..1527066 1 NC_005027.1 hypothetical protein 1527066 1795072 RB2963 Rhodopirellula baltica SH 1 hypothetical protein NP_865245.1 1526707 D 243090 CDS NP_865246.1 32472252 1790618 1527063..1529081 1 NC_005027.1 PMID: 8444796 best DB hits: BLAST: pir:E82299; cell division protein FtsH VC0637 [imported] - Vibrio; E=1e-133 swissprot:P28691; FTSH_ECOLI CELL DIVISION PROTEIN FTSH -----; E=1e-129 gb:AAA97508.1; (U01376) ATP-binding protein [Escherichia coli]; E=1e-129 COG: VC0637; COG0465 ATP-dependent Zn proteases; E=1e-134 PFAM: PF00158; Sigma-54 interaction domain; E=0.062 PF00910; RNA helicase; E=0.21 PF01695; IstB-like ATP binding protein; E=0.83; cell division protein FtsH 1529081 1790618 RB2966 Rhodopirellula baltica SH 1 cell division protein FtsH NP_865246.1 1527063 D 243090 CDS NP_865247.1 32472253 1797115 1529085..1530245 1 NC_005027.1 PMID: 7542800 best DB hits: BLAST: swissprot:P45339; YJEQ_HAEIN HYPOTHETICAL PROTEIN HI1714 -----; E=2e-35 gb:AAG59360.1; AE005649_5 (AE005649) orf, hypothetical protein; E=5e-34 pir:S56389; hypothetical 37.7K protein (psd-amiB intergenic region); E=8e-34 COG: HI1714; COG1162 Predicted GTPases; E=1e-36 PFAM: PF00005; ABC transporter; E=0.027 PF02421; Ferrous iron transport protein B; E=0.12; GTPase 1530245 1797115 RB2968 Rhodopirellula baltica SH 1 GTPase NP_865247.1 1529085 D 243090 CDS NP_865248.1 32472254 1793587 1530415..1531200 1 NC_005027.1 PMID: 8340421 best DB hits: BLAST: ddbj:BAA34057.1; (AB019196) phosphatidylethanolamine; E=3e-21 swissprot:Q05197; PMTA_RHOSH PHOSPHATIDYLETHANOLAMINE; E=1e-20 pir:E72392; ubiquinonemenaquinone biosynthesis-related protein -; E=7e-08 COG: TM0318; COG0500 SAM-dependent methyltransferases; E=7e-09 PA5063; COG2226 Methylase involved in ubiquinone/menaquinone; E=1e-05 PA3171; COG2227; E=1e-04 PFAM: PF01209; ubiE/COQ5 methyltransferase f; E=4.9e-06; phosphatidylethanolamine N-methyltransferase 1531200 1793587 RB2970 Rhodopirellula baltica SH 1 phosphatidylethanolamine N-methyltransferase NP_865248.1 1530415 D 243090 CDS NP_865249.1 32472255 1793572 1531140..1532180 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: embl:CAB61271.1; (AL132991) hypothetical protein SCF55.01c; E=1e-04 pir:F72378; conserved hypothetical protein - Thermotoga maritima; E=0.002 swissprot:O50580; DT3E_PSECI D-TAGATOSE 3-EPIMERASE -----; E=0.10 COG: TM0422; COG1082 Predicted endonucleases; E=2e-04; hypothetical protein 1532180 1793572 RB2971 Rhodopirellula baltica SH 1 hypothetical protein NP_865249.1 1531140 D 243090 CDS NP_865250.1 32472256 1793899 1532187..1532315 1 NC_005027.1 hypothetical protein 1532315 1793899 RB2973 Rhodopirellula baltica SH 1 hypothetical protein NP_865250.1 1532187 D 243090 CDS NP_865251.1 32472257 1792122 complement(1532322..1534973) 1 NC_005027.1 PMID: 11065377 PMID: 8412694 best DB hits: BLAST: gb:AAF17352.1; AF155830_1 (AF155830) ; E=1e-62 swissprot:Q9RAE4; GLND_RHILV [PROTEIN-PII] URIDYLYLTRANSFERASE; E=1e-62 swissprot:Q9KPV0; GLND_VIBCH [PROTEIN-PII] URIDYLYLTRANSFERASE; E=1e-61 COG: VC2262; COG2844 UTP:GlnB (protein PII) uridylyltransferase; E=9e-63 PFAM: PF01966; HD domain; E=0.48 PF01842; ACT domain; E=0.0017; uridylyltransferase/uridylyl-removing enzyme glnD 1534973 glnD 1792122 glnD Rhodopirellula baltica SH 1 uridylyltransferase/uridylyl-removing enzyme glnD NP_865251.1 1532322 R 243090 CDS NP_865252.1 32472258 1793498 complement(1534983..1535384) 1 NC_005027.1 PMID: 2907369 PMID: 2885322 PMID: 2907369 PMID: 8226691 best DB hits: BLAST: pir:D82102; nitrogen regulatory protein P-II VC2239 [imported] -; E=9e-35 pir:H81961; nitrogen regulatory protein P-II 1 NMA0447 [imported] -; E=3e-34 pir:B81019; nitrogen regulatory protein P-II NMB1995 [imported] -; E=3e-34 COG: VC2239; COG0347 Nitrogen regulatory protein PII; E=9e-36 PFAM: PF00543; Nitrogen regulatory protein P-II; E=7.7e-53; nitrogen regulatory protein P-II 1535384 glnB 1793498 glnB Rhodopirellula baltica SH 1 nitrogen regulatory protein P-II NP_865252.1 1534983 R 243090 CDS NP_865253.1 32472259 1792039 complement(1535418..1536008) 1 NC_005027.1 PMID: 10484179 best DB hits: BLAST: gb:AAG19830.1; (AE005068) Vng1547c [Halobacterium sp. NRC-1]; E=2e-29 ddbj:BAB05314.1; (AP001512) BH1595~unknown conserved protein; E=3e-29 pir:G83096; conserved hypothetical protein PA4399 [imported] -; E=8e-29 COG: VNG1547C; COG2096 Uncharacterized ACR; E=2e-30 PFAM: PF01923; Protein of unknown function DUF80; E=6.9e-58; hypothetical protein 1536008 1792039 RB2976 Rhodopirellula baltica SH 1 hypothetical protein NP_865253.1 1535418 R 243090 CDS NP_865254.1 32472260 1796674 1536161..1536619 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAC16440.1; (AL450165) MutT-family protein; E=2e-05 swissprot:P56380; AP4A_MOUSE BIS(5'-NUCLEOSYL)-TETRAPHOSPHATASE; E=5e-05 pir:F75532; MutTnudix family protein - Deinococcus radiodurans; E=3e-04 COG: DR0329; COG0494 NTP pyrophosphohydrolases including oxidative damage; E=3e-05 DR0004; COG0494 NTP pyrophosphohydrolases including oxidative; E=4e-05 DR0550; COG0494 NTP pyrophosphohydrolases including oxidative damage; E=1e-04 PFAM: PF00293; MutT-like domain; E=4.8e-17; MutT-family protein 1536619 1796674 RB2978 Rhodopirellula baltica SH 1 MutT-family protein NP_865254.1 1536161 D 243090 CDS NP_865255.1 32472261 1797102 1536671..1537645 1 NC_005027.1 best DB hits: PFAM: PF01322; Cytochrome C'; E=0.0044; signal peptide 1537645 1797102 RB2979 Rhodopirellula baltica SH 1 signal peptide NP_865255.1 1536671 D 243090 CDS NP_865256.1 32472262 1792115 complement(1537699..1537815) 1 NC_005027.1 hypothetical protein 1537815 1792115 RB2981 Rhodopirellula baltica SH 1 hypothetical protein NP_865256.1 1537699 R 243090 CDS NP_865257.1 32472263 1789990 1537945..1539789 1 NC_005027.1 PMID: 9389475 best DB hits: BLAST: gb:AAB89832.1; (AE001006) chloride channel, ; E=3e-82 embl:CAC12582.1; (AL445067) chloride channel (CLC-3) related; E=2e-49 pir:B70617; hypothetical protein Rv0143c - Mycobacterium; E=1e-33 COG: AF1415_1; COG0038 Chloride channel protein EriC; E=7e-68 aq_438_2; COG0517 CBS domains; E=6e-09 sll0855; COG0038 Chloride channel protein EriC; E=1e-08 PFAM: PF00654; Voltage gated chloride channe; E=1.8e-62 PF00571; CBS domain; E=1.7e-06; chloride channel 1539789 1789990 RB2982 Rhodopirellula baltica SH 1 chloride channel NP_865257.1 1537945 D 243090 CDS NP_865258.1 32472264 1794074 complement(1539799..1540680) 1 NC_005027.1 PMID: 9809430 PMID: 2471187 PMID: 2551682 best DB hits: BLAST: swissprot:Q9X725; OXYR_ERWCH HYDROGEN PEROXIDE-INDUCIBLE GENES; E=8e-33 swissprot:P71318; OXYR_ERWCA HYDROGEN PEROXIDE-INDUCIBLE GENES; E=2e-32 gb:AAA24257.1; (J04553) oxyR protein [Escherichia coli]; E=1e-30 COG: oxyR; COG0583 Transcriptional regulator; E=3e-31 PFAM: PF00126; Bacterial regulatory helix-turn-heli; E=1.6e-47; hydrogen peroxide-inducible genes activator 1540680 1794074 RB2983 Rhodopirellula baltica SH 1 hydrogen peroxide-inducible genes activator NP_865258.1 1539799 R 243090 CDS NP_865259.1 32472265 1794109 complement(1540943..1542040) 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S75877; hypothetical protein slr1166 - Synechocystis sp. (strain; E=1e-18 swissprot:Q48453; YC07_KLEPN HYPOTHETICAL 41.2 KD PROTEIN IN CPS; E=5e-09 pir:T46662; alpha 1,2 N-acetylglucosamine transferase [imported] -; E=7e-08 COG: slr1166; COG0438 Predicted glycosyltransferases; E=1e-19 PFAM: PF00534; Glycosyl transferases group 1; E=7.8e-18; glycosyltransferase 1542040 1794109 RB2985 Rhodopirellula baltica SH 1 glycosyltransferase NP_865259.1 1540943 R 243090 CDS NP_865260.1 32472266 1793526 complement(1542063..1543823) 1 NC_005027.1 PMID: 9692189 best DB hits: BLAST: pir:JE0181; oligo-1,6-glucosidase (EC 3.2.1.10) - Bacillus; E=1e-143 ddbj:BAB18518.1; (AB003697) oligo-1,6-glucosidase [Bacillus; E=1e-143 gb:AAD50603.1; AF096282_1 (AF096282) alpha-glucosidase [Thermus; E=1e-141 COG: DR1375; COG0366 Glycosidases; E=1e-140 PFAM: PF00128; Alpha amylase, catalytic domain; E=1.8e-99; oligo-1,6-glucosidase 1543823 1793526 RB2986 Rhodopirellula baltica SH 1 oligo-1,6-glucosidase NP_865260.1 1542063 R 243090 CDS NP_865261.1 32472267 1793832 complement(1543851..1545296) 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: pir:E72203; conserved hypothetical protein - Thermotoga maritima; E=7e-25 pir:B72278; conserved hypothetical protein - Thermotoga maritima; E=4e-17 gb:AAG45396.1; AF307053_11 (AF307053) unknown [Thermococcus; E=6e-10 COG: TM1852; COG2152 Uncharacterized ACR; E=7e-26; hypothetical protein 1545296 1793832 RB2988 Rhodopirellula baltica SH 1 hypothetical protein NP_865261.1 1543851 R 243090 CDS NP_865262.1 32472268 1792258 complement(1545303..1547579) 1 NC_005027.1 PMID: 9537320 best DB hits: BLAST: pir:B70393; hypothetical protein aq_1080 - Aquifex aeolicus -----; E=2e-11 pir:E83367; hypothetical protein PA2236 [imported] - Pseudomonas; E=8e-09 pir:S77553; probable hexosyltransferase (EC 2.4.1.-) sll1971; E=4e-07 COG: aq_1080; COG0438 Predicted glycosyltransferases; E=2e-12 PFAM: PF00534; Glycosyl transferases group 1; E=1.3e-15; glycosyltransferase 1547579 1792258 RB2990 Rhodopirellula baltica SH 1 glycosyltransferase NP_865262.1 1545303 R 243090 CDS NP_865263.1 32472269 1791375 complement(1547583..1548758) 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: pir:E72203; conserved hypothetical protein - Thermotoga maritima; E=2e-36 pir:B72278; conserved hypothetical protein - Thermotoga maritima; E=9e-34 gb:AAG45396.1; AF307053_11 (AF307053) unknown [Thermococcus; E=5e-18 COG: TM1852; COG2152 Uncharacterized ACR; E=2e-37; hypothetical protein 1548758 1791375 RB2991 Rhodopirellula baltica SH 1 hypothetical protein NP_865263.1 1547583 R 243090 CDS NP_865264.1 32472270 1792761 complement(1548650..1550494) 1 NC_005027.1 PMID: 7686067 PMID: 2497294 best DB hits: BLAST: ddbj:BAB06792.1; (AP001517) PTS system, enzyme I [Bacillus; E=6e-71 swissprot:P08838; PT1_BACSU PHOSPHOENOLPYRUVATE-PROTEIN; E=2e-68 swissprot:O69251; PT1_BACME PHOSPHOENOLPYRUVATE-PROTEIN; E=5e-67 COG: BH3073; COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI; E=5e-72 PFAM: PF00391; PEP-utilizing enzyme, mobile; E=2.7e-21 PF02896; PEP-utilizing enzyme, TIM bar; E=1.5e-63; phosphoenolpyruvate-protein phosphotransferase 1550494 1792761 RB2992 Rhodopirellula baltica SH 1 phosphoenolpyruvate-protein phosphotransferase NP_865264.1 1548650 R 243090 CDS NP_865265.1 32472271 1792201 complement(1550491..1550784) 1 NC_005027.1 hypothetical protein 1550784 1792201 RB2993 Rhodopirellula baltica SH 1 hypothetical protein NP_865265.1 1550491 R 243090 CDS NP_865266.1 32472272 1793382 complement(1550765..1551052) 1 NC_005027.1 hypothetical protein 1551052 1793382 RB2995 Rhodopirellula baltica SH 1 hypothetical protein NP_865266.1 1550765 R 243090 CDS NP_865267.1 32472273 1796790 complement(1551049..1551603) 1 NC_005027.1 hypothetical protein 1551603 1796790 RB2997 Rhodopirellula baltica SH 1 hypothetical protein NP_865267.1 1551049 R 243090 CDS NP_865268.1 32472274 1794446 complement(1551732..1552886) 1 NC_005027.1 PMID: 7894707 best DB hits: BLAST: pir:T35404; probable squalene-hopene cyclase - Streptomyces; E=4e-04 swissprot:P33990; SQHC_ZYMMO SQUALENE--HOPENE CYCLASE -----; E=0.002 pir:T45142; squalene-hopene cyclase [imported] - Methylococcus; E=0.003 COG: slr2089; COG1657 Squalene cyclase; E=0.002; squalene-hopene cyclase 1552886 1794446 RB2998 Rhodopirellula baltica SH 1 squalene-hopene cyclase NP_865268.1 1551732 R 243090 CDS NP_865269.1 32472275 1796623 complement(1553125..1554588) 1 NC_005027.1 best DB hits: PFAM: PF02012; BNR repeat; E=0.05; hypothetical protein 1554588 1796623 RB3001 Rhodopirellula baltica SH 1 hypothetical protein NP_865269.1 1553125 R 243090 CDS NP_865270.1 32472276 1797109 1554413..1555936 1 NC_005027.1 PMID: 9371463 best DB hits: BLAST: pir:H69064; serinethreonine protein kinase related protein -; E=0.005 gb:AAG31643.1; AF309488_1 (AF309488) methanol dehydrogenase large; E=0.009 pir:F72237; conserved hypothetical protein - Thermotoga maritima; E=0.29 COG: MTH1485; COG1520 Uncharacterized proteins of WD40-like repeat family; E=5e-04 PFAM: PF01011; PQQ enzyme repeat; E=0.00081; serine/threonine protein kinase related protein 1555936 1797109 RB3003 Rhodopirellula baltica SH 1 serine/threonine protein kinase related protein NP_865270.1 1554413 D 243090 CDS NP_865271.1 32472277 1792062 complement(1556094..1556690) 1 NC_005027.1 hypothetical protein 1556690 1792062 RB3005 Rhodopirellula baltica SH 1 hypothetical protein NP_865271.1 1556094 R 243090 CDS NP_865272.1 32472278 1790735 complement(1556810..1560271) 1 NC_005027.1 PMID: 1400240 PMID: 8591030 best DB hits: BLAST: pir:A49227; sialidase - Actinomyces viscosus ----- gb:; E=1e-06 pir:S20590; exo-alpha-sialidase (EC 3.2.1.18) - Actinomyces viscosus; E=2e-06 swissprot:Q02834; NANH_MICVI SIALIDASE PRECURSOR (NEURAMINIDASE); E=3e-05 PFAM: PF02012; BNR repeat; E=0.098; sialidase 1560271 1790735 RB3006 Rhodopirellula baltica SH 1 sialidase NP_865272.1 1556810 R 243090 CDS NP_865273.1 32472279 1795385 1560249..1560431 1 NC_005027.1 hypothetical protein 1560431 1795385 RB3009 Rhodopirellula baltica SH 1 hypothetical protein NP_865273.1 1560249 D 243090 CDS NP_865274.1 32472280 1793861 1560514..1563087 1 NC_005027.1 PMID: 2670897 best DB hits: BLAST: swissprot:P14412; CATA_BACST PEROXIDASECATALASE; E=0.0 ddbj:BAA36976.1; (AB020064) catalase [Bacillus; E=0.0 ddbj:BAA36977.1; (AB020065) catalase [Bacillus; E=0.0 COG: BH0906; COG0376 Catalase (peroxidase I); E=0.0 PFAM: PF00141; Peroxidase; E=2.4e-87; peroxidase/catalase 1563087 perA 1793861 perA Rhodopirellula baltica SH 1 peroxidase/catalase NP_865274.1 1560514 D 243090 CDS NP_865275.1 32472281 1793170 complement(1563069..1563395) 1 NC_005027.1 hypothetical protein 1563395 1793170 RB3012 Rhodopirellula baltica SH 1 hypothetical protein NP_865275.1 1563069 R 243090 CDS NP_865276.1 32472282 1796875 1563386..1563619 1 NC_005027.1 hypothetical protein 1563619 1796875 RB3013 Rhodopirellula baltica SH 1 hypothetical protein NP_865276.1 1563386 D 243090 CDS NP_865277.1 32472283 1796671 complement(1563732..1565306) 1 NC_005027.1 PMID: 9371463 best DB hits: BLAST: pir:H69068; cell surface glycoprotein (s-layer protein) related; E=2e-25 pir:A72266; hypothetical protein - Thermotoga maritima (strain MSB8); E=5e-04; cell surface glycoprotein (s-layer protein) related protein 1565306 1796671 RB3014 Rhodopirellula baltica SH 1 cell surface glycoprotein (s-layer protein) related protein NP_865277.1 1563732 R 243090 CDS NP_865278.1 32472284 1795961 complement(1565377..1565832) 1 NC_005027.1 PMID: 11248100 best DB hits: BLAST: gb:AAK03752.1; (AE006203) unknown [Pasteurella multocida]; E=6e-19 pir:B64825; hypothetical protein b0866 - Escherichia coli -----; E=3e-18 ddbj:BAB04830.1; (AP001510) BH1111~unknown conserved protein; E=4e-18 COG: ybjQ; COG0393 Uncharacterized ACR; E=3e-19 PFAM: PF01906; Domain of unknown function DUF74; E=2.7e-35; hypothetical protein 1565832 1795961 RB3016 Rhodopirellula baltica SH 1 hypothetical protein NP_865278.1 1565377 R 243090 CDS NP_865279.1 32472285 1791986 complement(1565935..1566234) 1 NC_005027.1 hypothetical protein 1566234 1791986 RB3020 Rhodopirellula baltica SH 1 hypothetical protein NP_865279.1 1565935 R 243090 CDS NP_865280.1 32472286 1795025 complement(1566414..1566881) 1 NC_005027.1 PMID: 11689431 best DB hits: BLAST: ddbj:BAA09768.1; (D63481) The KIAA0147 gene product is related to; E=0.009 gb:AAK02818.1; (AE006110) HtrA [Pasteurella multocida]; E=0.038 swissprot:P37764; YAEL_ECOLI HYPOTHETICAL 49.1 KDA PROTEIN IN; E=0.056 COG: yaeL; COG0750 Predicted membrane-associated Zn-dependent proteases 1; E=0.005 PFAM: PF00595; PDZ domain (Also known as DHR or GLG; E=0.00026; protease ecfE 1566881 1795025 RB3023 Rhodopirellula baltica SH 1 protease ecfE NP_865280.1 1566414 R 243090 CDS NP_865281.1 32472287 1793941 complement(1567052..1567492) 1 NC_005027.1 hypothetical protein 1567492 1793941 RB3029 Rhodopirellula baltica SH 1 hypothetical protein NP_865281.1 1567052 R 243090 CDS NP_865282.1 32472288 1795744 complement(1567532..1567705) 1 NC_005027.1 hypothetical protein 1567705 1795744 RB3031 Rhodopirellula baltica SH 1 hypothetical protein NP_865282.1 1567532 R 243090 CDS NP_865283.1 32472289 1796755 1567813..1569246 1 NC_005027.1 PMID: 11214968 best DB hits: BLAST: pir:S74039; hypothetical protein c0103 - Sulfolobus solfataricus; E=0.060 pir:T50944; hypothetical protein [imported] - Pseudomonas; E=0.62 PFAM: PF00452; Apoptosis regulator proteins, Bcl-2; E=0.19 PF01587; Monocarboxylate transporter; E=0.79; hypothetical protein 1569246 1796755 RB3032 Rhodopirellula baltica SH 1 hypothetical protein NP_865283.1 1567813 D 243090 CDS NP_865284.1 32472290 1791146 complement(1569573..1572089) 1 NC_005027.1 signal peptide 1572089 1791146 RB3034 Rhodopirellula baltica SH 1 signal peptide NP_865284.1 1569573 R 243090 CDS NP_865285.1 32472291 1790536 complement(1572092..1573582) 1 NC_005027.1 hypothetical protein 1573582 1790536 RB3036 Rhodopirellula baltica SH 1 hypothetical protein NP_865285.1 1572092 R 243090 CDS NP_865286.1 32472292 1793361 1573758..1573979 1 NC_005027.1 hypothetical protein 1573979 1793361 RB3038 Rhodopirellula baltica SH 1 hypothetical protein NP_865286.1 1573758 D 243090 CDS NP_865287.1 32472293 1796021 complement(1573993..1574517) 1 NC_005027.1 signal peptide 1574517 1796021 RB3040 Rhodopirellula baltica SH 1 signal peptide NP_865287.1 1573993 R 243090 CDS NP_865288.1 32472294 1790321 complement(1574747..1575622) 1 NC_005027.1 hypothetical protein 1575622 1790321 RB3042 Rhodopirellula baltica SH 1 hypothetical protein NP_865288.1 1574747 R 243090 CDS NP_865289.1 32472295 1796682 1575707..1575892 1 NC_005027.1 hypothetical protein 1575892 1796682 RB3043 Rhodopirellula baltica SH 1 hypothetical protein NP_865289.1 1575707 D 243090 CDS NP_865290.1 32472296 1790033 1576053..1576196 1 NC_005027.1 signal peptide 1576196 1790033 RB3044 Rhodopirellula baltica SH 1 signal peptide NP_865290.1 1576053 D 243090 CDS NP_865291.1 32472297 1794525 complement(1576172..1576411) 1 NC_005027.1 hypothetical protein 1576411 1794525 RB3045 Rhodopirellula baltica SH 1 hypothetical protein NP_865291.1 1576172 R 243090 CDS NP_865292.1 32472298 1793255 complement(1576513..1576914) 1 NC_005027.1 hypothetical protein 1576914 1793255 RB3047 Rhodopirellula baltica SH 1 hypothetical protein NP_865292.1 1576513 R 243090 CDS NP_865293.1 32472299 1793015 1576919..1577185 1 NC_005027.1 hypothetical protein 1577185 1793015 RB3048 Rhodopirellula baltica SH 1 hypothetical protein NP_865293.1 1576919 D 243090 CDS NP_865294.1 32472300 1790077 complement(1577122..1577619) 1 NC_005027.1 hypothetical protein 1577619 1790077 RB3050 Rhodopirellula baltica SH 1 hypothetical protein NP_865294.1 1577122 R 243090 CDS NP_865295.1 32472301 1795723 complement(1577692..1577799) 1 NC_005027.1 hypothetical protein 1577799 1795723 RB3052 Rhodopirellula baltica SH 1 hypothetical protein NP_865295.1 1577692 R 243090 CDS NP_865296.1 32472302 1792025 complement(1577917..1579383) 1 NC_005027.1 PMID: 10768931 best DB hits: BLAST: gb:AAK00475.1; (AF200692) unknown [Shigella flexneri 2a]; E=5e-34 pir:H64964; probable membrane protein b2001 - Escherichia coli; E=1e-18 swissprot:P76361; YEER_ECOLI HYPOTHETICAL 57.2 KDA PROTEIN IN; E=1e-18; hypothetical protein 1579383 1792025 RB3053 Rhodopirellula baltica SH 1 hypothetical protein NP_865296.1 1577917 R 243090 CDS NP_865297.1 32472303 1793427 complement(1579428..1579586) 1 NC_005027.1 hypothetical protein 1579586 1793427 RB3055 Rhodopirellula baltica SH 1 hypothetical protein NP_865297.1 1579428 R 243090 CDS NP_865298.1 32472304 1795186 complement(1579679..1579951) 1 NC_005027.1 hypothetical protein 1579951 1795186 RB3056 Rhodopirellula baltica SH 1 hypothetical protein NP_865298.1 1579679 R 243090 CDS NP_865299.1 32472305 1795956 1579920..1580138 1 NC_005027.1 hypothetical protein 1580138 1795956 RB3057 Rhodopirellula baltica SH 1 hypothetical protein NP_865299.1 1579920 D 243090 CDS NP_865300.1 32472306 1794320 1580135..1580323 1 NC_005027.1 hypothetical protein 1580323 1794320 RB3059 Rhodopirellula baltica SH 1 hypothetical protein NP_865300.1 1580135 D 243090 CDS NP_865301.1 32472307 1795729 complement(1580342..1580947) 1 NC_005027.1 signal peptide 1580947 1795729 RB3060 Rhodopirellula baltica SH 1 signal peptide NP_865301.1 1580342 R 243090 CDS NP_865302.1 32472308 1792526 complement(1580981..1581151) 1 NC_005027.1 hypothetical protein 1581151 1792526 RB3061 Rhodopirellula baltica SH 1 hypothetical protein NP_865302.1 1580981 R 243090 CDS NP_865303.1 32472309 1790681 complement(1581001..1581282) 1 NC_005027.1 hypothetical protein 1581282 1790681 RB3062 Rhodopirellula baltica SH 1 hypothetical protein NP_865303.1 1581001 R 243090 CDS NP_865304.1 32472310 1791580 1581333..1581500 1 NC_005027.1 hypothetical protein 1581500 1791580 RB3063 Rhodopirellula baltica SH 1 hypothetical protein NP_865304.1 1581333 D 243090 CDS NP_865305.1 32472311 1796188 complement(1581347..1581532) 1 NC_005027.1 hypothetical protein 1581532 1796188 RB3064 Rhodopirellula baltica SH 1 hypothetical protein NP_865305.1 1581347 R 243090 CDS NP_865306.1 32472312 1796031 complement(1581536..1582336) 1 NC_005027.1 PMID: 9384377 best DB hits: BLAST: pir:G69742; hypothetical protein ybaJ - Bacillus subtilis -----; E=7e-69 pir:E83313; conserved hypothetical protein PA2650 [imported] -; E=2e-60 pir:T35744; hypothetical protein SC7H2.13 - Streptomyces coelicolor; E=9e-05 COG: BS_ybaJ; COG0500 SAM-dependent methyltransferases; E=6e-70; SAM-dependent methyltransferase 1582336 1796031 RB3065 Rhodopirellula baltica SH 1 SAM-dependent methyltransferase NP_865306.1 1581536 R 243090 CDS NP_865307.1 32472313 1796141 complement(1582389..1582850) 1 NC_005027.1 PMID: 6087149 best DB hits: BLAST: embl:CAA24848.1; (V01555) BSLF1 reading frame, homologous to RF 6; E=0.091; helicase/primase complex protein 1582850 1796141 RB3067 Rhodopirellula baltica SH 1 helicase/primase complex protein NP_865307.1 1582389 R 243090 CDS NP_865308.1 32472314 1794546 1582898..1583305 1 NC_005027.1 hypothetical protein 1583305 1794546 RB3068 Rhodopirellula baltica SH 1 hypothetical protein NP_865308.1 1582898 D 243090 CDS NP_865309.1 32472315 1794796 1583339..1583455 1 NC_005027.1 hypothetical protein 1583455 1794796 RB3069 Rhodopirellula baltica SH 1 hypothetical protein NP_865309.1 1583339 D 243090 CDS NP_865310.1 32472316 1791255 complement(1583469..1584986) 1 NC_005027.1 PMID: 10484179 best DB hits: BLAST: ddbj:BAB05884.1; (AP001514) BH2165~unknown conserved protein; E=1e-09 embl:CAC24034.1; (AL512980) ORF-c34_017 [Sulfolobus solfataricus]; E=4e-09 ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=1e-08 COG: BH2165; COG0673 Predicted dehydrogenases and related proteins; E=1e-10 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=1.3e-20; oxidoreductase 1584986 1791255 RB3070 Rhodopirellula baltica SH 1 oxidoreductase NP_865310.1 1583469 R 243090 CDS NP_865311.1 32472317 1796585 complement(1585025..1585180) 1 NC_005027.1 hypothetical protein 1585180 1796585 RB3073 Rhodopirellula baltica SH 1 hypothetical protein NP_865311.1 1585025 R 243090 CDS NP_865312.1 32472318 1789984 complement(1585164..1585325) 1 NC_005027.1 hypothetical protein 1585325 1789984 RB3074 Rhodopirellula baltica SH 1 hypothetical protein NP_865312.1 1585164 R 243090 CDS NP_865313.1 32472319 1793272 complement(1585356..1588022) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: gb:AAF12630.1; AE001826_99 (AE001826) hypothetical protein; E=0.33 PFAM: PF00404; Dockerin type I repeat; E=0.54; hypothetical protein 1588022 1793272 RB3075 Rhodopirellula baltica SH 1 hypothetical protein NP_865313.1 1585356 R 243090 CDS NP_865314.1 32472320 1795986 complement(1588083..1606106) 1 NC_005027.1 cyclic nucleotide-binding protein 1606106 1795986 RB3077 Rhodopirellula baltica SH 1 cyclic nucleotide-binding protein NP_865314.1 1588083 R 243090 CDS NP_865315.1 32472321 1793284 complement(1606106..1606459) 1 NC_005027.1 hypothetical protein 1606459 1793284 RB3097 Rhodopirellula baltica SH 1 hypothetical protein NP_865315.1 1606106 R 243090 CDS NP_865316.1 32472322 1791131 1606474..1607100 1 NC_005027.1 signal peptide 1607100 1791131 RB3100 Rhodopirellula baltica SH 1 signal peptide NP_865316.1 1606474 D 243090 CDS NP_865317.1 32472323 1791520 complement(1607367..1610966) 1 NC_005027.1 PMID: 3316192 PMID: 3316192 best DB hits: BLAST: swissprot:O83675; DP3A_TREPA DNA POLYMERASE III, ALPHA CHAIN -----; E=0.0 gb:AAD44403.1; (AF062920) DNA polymerase III [Thermus aquaticus]; E=0.0 swissprot:O67125; DP3A_AQUAE DNA POLYMERASE III, ALPHA CHAIN -----; E=0.0 COG: TP0669; COG0587 DNA polymerase III alpha subunit; E=0.0 PFAM: PF02231; PHP domain N-terminal region; E=5.8e-32 PF02811; PHP domain C-terminal region; E=2e-36 PF01336; OB-fold nucleic acid binding domain; E=1.4e-08; DNA polymerase III alpha subunit 1610966 dnaE 1791520 dnaE Rhodopirellula baltica SH 1 DNA polymerase III alpha subunit NP_865317.1 1607367 R 243090 CDS NP_865318.1 32472324 1792810 complement(1611136..1611366) 1 NC_005027.1 hypothetical protein 1611366 1792810 RB3107 Rhodopirellula baltica SH 1 hypothetical protein NP_865318.1 1611136 R 243090 CDS NP_865319.1 32472325 1793978 1611359..1612594 1 NC_005027.1 PMID: 7781769 PMID: 1657179 PMID: 8021187 best DB hits: BLAST: pir:B75584; cytochrome-c peroxidase (EC 1.11.1.5) DRA0301; E=1e-36 swissprot:Q50426; MAUG_METFL METHYLAMINE UTILIZATION PROTEIN MAUG; E=9e-36 swissprot:Q49128; MAUG_METEX METHYLAMINE UTILIZATION PROTEIN MAUG; E=2e-31 COG: DRA0301; COG1858 Cytochrome c peroxidase; E=1e-37; cytochrome-c peroxidase 1612594 mauG 1793978 mauG Rhodopirellula baltica SH 1 cytochrome-c peroxidase NP_865319.1 1611359 D 243090 CDS NP_865320.1 32472326 1795155 1612763..1613722 1 NC_005027.1 hypothetical protein 1613722 1795155 RB3112 Rhodopirellula baltica SH 1 hypothetical protein NP_865320.1 1612763 D 243090 CDS NP_865321.1 32472327 1795456 complement(1613895..1614395) 1 NC_005027.1 signal peptide 1614395 1795456 RB3114 Rhodopirellula baltica SH 1 signal peptide NP_865321.1 1613895 R 243090 CDS NP_865322.1 32472328 1795780 complement(1614449..1615129) 1 NC_005027.1 signal peptide 1615129 1795780 RB3116 Rhodopirellula baltica SH 1 signal peptide NP_865322.1 1614449 R 243090 CDS NP_865323.1 32472329 1792072 complement(1615164..1615433) 1 NC_005027.1 hypothetical protein 1615433 1792072 RB3117 Rhodopirellula baltica SH 1 hypothetical protein NP_865323.1 1615164 R 243090 CDS NP_865324.1 32472330 1793002 complement(1615430..1615828) 1 NC_005027.1 hypothetical protein 1615828 1793002 RB3118 Rhodopirellula baltica SH 1 hypothetical protein NP_865324.1 1615430 R 243090 CDS NP_865325.1 32472331 1796163 complement(1615923..1616510) 1 NC_005027.1 signal peptide 1616510 1796163 RB3119 Rhodopirellula baltica SH 1 signal peptide NP_865325.1 1615923 R 243090 CDS NP_865326.1 32472332 1791539 complement(1616646..1617944) 1 NC_005027.1 PMID: 98242082 best DB hits: BLAST: gb:AAF21820.1; AF098954_1 (AF098954) beta-agarase A precursor; E=1e-08 pir:T18265; endo-1,3(4)-beta-glucanase (EC 3.2.1.6) - Clostridium; E=2e-08 embl:CAC27412.1; (AJ307315) endo-1,3(4)-beta-glucanase; E=2e-08 COG: TM0024; COG2273 Beta-glucanase/Beta-glucan synthetase; E=5e-09 PFAM: PF00722; Glycosyl hydrolases family 16; E=0.15 PF02018; Cellulose binding domain; E=3.1e-05; glycosyl hydrolase- kappa-carrageenase precursor 1617944 1791539 RB3123 Rhodopirellula baltica SH 1 glycosyl hydrolase- kappa-carrageenase precursor NP_865326.1 1616646 R 243090 CDS NP_865327.1 32472333 1794788 complement(1617972..1618379) 1 NC_005027.1 hypothetical protein 1618379 1794788 RB3125 Rhodopirellula baltica SH 1 hypothetical protein NP_865327.1 1617972 R 243090 CDS NP_865328.1 32472334 1796664 1618378..1618584 1 NC_005027.1 hypothetical protein 1618584 1796664 RB3127 Rhodopirellula baltica SH 1 hypothetical protein NP_865328.1 1618378 D 243090 CDS NP_865329.1 32472335 1796698 complement(1618539..1618907) 1 NC_005027.1 signal peptide 1618907 1796698 RB3128 Rhodopirellula baltica SH 1 signal peptide NP_865329.1 1618539 R 243090 CDS NP_865330.1 32472336 1791045 complement(1618917..1619042) 1 NC_005027.1 hypothetical protein 1619042 1791045 RB3131 Rhodopirellula baltica SH 1 hypothetical protein NP_865330.1 1618917 R 243090 CDS NP_865331.1 32472337 1793661 complement(1619062..1619400) 1 NC_005027.1 hypothetical protein 1619400 1793661 RB3132 Rhodopirellula baltica SH 1 hypothetical protein NP_865331.1 1619062 R 243090 CDS NP_865332.1 32472338 1790141 1619477..1620007 1 NC_005027.1 hypothetical protein 1620007 1790141 RB3133 Rhodopirellula baltica SH 1 hypothetical protein NP_865332.1 1619477 D 243090 CDS NP_865333.1 32472339 1796582 complement(1620056..1620661) 1 NC_005027.1 hypothetical protein 1620661 1796582 RB3136 Rhodopirellula baltica SH 1 hypothetical protein NP_865333.1 1620056 R 243090 CDS NP_865334.1 32472340 1792715 1620838..1621173 1 NC_005027.1 hypothetical protein 1621173 1792715 RB3140 Rhodopirellula baltica SH 1 hypothetical protein NP_865334.1 1620838 D 243090 CDS NP_865335.1 32472341 1792921 complement(1621122..1621640) 1 NC_005027.1 PMID: 9278503 best DB hits: BLAST: pir:C65016; hypothetical protein b2420 - Escherichia coli (strain; E=7e-04; hypothetical protein 1621640 1792921 RB3141 Rhodopirellula baltica SH 1 hypothetical protein NP_865335.1 1621122 R 243090 CDS NP_865336.1 32472342 1793512 1621173..1621715 1 NC_005027.1 hypothetical protein 1621715 1793512 RB3142 Rhodopirellula baltica SH 1 hypothetical protein NP_865336.1 1621173 D 243090 CDS NP_865337.1 32472343 1792994 1621739..1622785 1 NC_005027.1 PMID: 7607529 PMID: 9163424 PMID: 8402918 best DB hits: BLAST: swissprot:P55632; Y4QK_RHISN INTEGRASERECOMBINASE Y4QK; E=3e-39 swissprot:P55429; Y4EF_RHISN INTEGRASERECOMBINASE Y4EF; E=1e-32 prf:2115270D; integrase [Weeksella zoohelcum]; E=6e-23 COG: PAB0255; COG0582 Integrase; E=1e-20 PFAM: PF02899; Phage integrase, N-terminal S; E=0.3 PF00589; Phage integrase; E=8e-31; integrase/recombinase Y4QK 1622785 1792994 RB3144 Rhodopirellula baltica SH 1 integrase/recombinase Y4QK NP_865337.1 1621739 D 243090 CDS NP_865338.1 32472344 1794768 1622800..1623948 1 NC_005027.1 PMID: 7607529 PMID: 9163424 best DB hits: BLAST: prf:2115270C; transposase [Weeksella zoohelcum]; E=1e-33 swissprot:P55631; Y4QJ_RHISN TRANSPOSASE Y4QJ -----; E=1e-32 swissprot:P24607; T801_PSESH TRANSPOSASE FOR INSERTION SEQUENCE; E=2e-09 PFAM: PF01096; Transcription factor S-II (TFIIS); E=0.19; transposase 1623948 1794768 RB3145 Rhodopirellula baltica SH 1 transposase NP_865338.1 1622800 D 243090 CDS NP_865339.1 32472345 1794499 1623952..1624248 1 NC_005027.1 PMID: 7607529; hypothetical protein 1624248 1794499 RB3146 Rhodopirellula baltica SH 1 hypothetical protein NP_865339.1 1623952 D 243090 CDS NP_865340.1 32472346 1790894 complement(1624334..1624840) 1 NC_005027.1 hypothetical protein 1624840 1790894 RB3147 Rhodopirellula baltica SH 1 hypothetical protein NP_865340.1 1624334 R 243090 CDS NP_865341.1 32472347 1791042 complement(1624932..1625477) 1 NC_005027.1 signal peptide 1625477 1791042 RB3148 Rhodopirellula baltica SH 1 signal peptide NP_865341.1 1624932 R 243090 CDS NP_865342.1 32472348 1796133 complement(1625576..1626070) 1 NC_005027.1 best DB hits: PFAM: PF02413; Domain of unknown function DUF144; E=0.11; hypothetical protein 1626070 1796133 RB3149 Rhodopirellula baltica SH 1 hypothetical protein NP_865342.1 1625576 R 243090 CDS NP_865343.1 32472349 1796134 complement(1626234..1626464) 1 NC_005027.1 hypothetical protein 1626464 1796134 RB3151 Rhodopirellula baltica SH 1 hypothetical protein NP_865343.1 1626234 R 243090 CDS NP_865344.1 32472350 1794689 complement(1626461..1626667) 1 NC_005027.1 hypothetical protein 1626667 1794689 RB3152 Rhodopirellula baltica SH 1 hypothetical protein NP_865344.1 1626461 R 243090 CDS NP_865345.1 32472351 1791094 complement(1626681..1626911) 1 NC_005027.1 hypothetical protein 1626911 1791094 RB3153 Rhodopirellula baltica SH 1 hypothetical protein NP_865345.1 1626681 R 243090 CDS NP_865346.1 32472352 1790732 complement(1626925..1627155) 1 NC_005027.1 hypothetical protein 1627155 1790732 RB3154 Rhodopirellula baltica SH 1 hypothetical protein NP_865346.1 1626925 R 243090 CDS NP_865347.1 32472353 1793044 complement(1627149..1627430) 1 NC_005027.1 hypothetical protein 1627430 1793044 RB3155 Rhodopirellula baltica SH 1 hypothetical protein NP_865347.1 1627149 R 243090 CDS NP_865348.1 32472354 1792260 1627662..1629014 1 NC_005027.1 PMID: 7607529 PMID: 9163424 PMID: 8402918 best DB hits: BLAST: gb:AAA88676.1; (M33633) unknown protein [Transposon Tn21]; E=1e-56 embl:CAA75043.1; (Y14748) int [Corynebacterium glutamicum]; E=4e-56 gb:AAF72980.1; AF255921_1 (AF255921) recombinase [Shigella; E=4e-56 COG: VCA0291; COG0582 Integrase; E=1e-49 PFAM: PF00589; Phage integrase; E=2.9e-32; integrase/recombinase Y4QK 1629014 1792260 RB3157 Rhodopirellula baltica SH 1 integrase/recombinase Y4QK NP_865348.1 1627662 D 243090 CDS NP_865349.1 32472355 1797100 1628996..1629142 1 NC_005027.1 hypothetical protein 1629142 1797100 RB3158 Rhodopirellula baltica SH 1 hypothetical protein NP_865349.1 1628996 D 243090 CDS NP_865350.1 32472356 1797075 complement(1629116..1629337) 1 NC_005027.1 hypothetical protein 1629337 1797075 RB3159 Rhodopirellula baltica SH 1 hypothetical protein NP_865350.1 1629116 R 243090 CDS NP_865351.1 32472357 1792303 complement(1629437..1630387) 1 NC_005027.1 hypothetical protein 1630387 1792303 RB3160 Rhodopirellula baltica SH 1 hypothetical protein NP_865351.1 1629437 R 243090 CDS NP_865352.1 32472358 1796238 complement(1630685..1633777) 1 NC_005027.1 PMID: 2914847 PMID: 1997423 PMID: 3066701 best DB hits: BLAST: swissprot:P21354; OM6L_CHLTR 60 KDA OUTER MEMBRANE PROTEIN,; E=9e-20 gb:AAA23119.1; (M35148) 60-kDa cysteine-rich outer membrane; E=9e-20 swissprot:P23603; OM6E_CHLTR 60 KDA OUTER MEMBRANE PROTEIN,; E=3e-19 PFAM: PF00313; 'Cold-shock' DNA-binding domain; E=0.64; hypothetical protein 1633777 1796238 RB3164 Rhodopirellula baltica SH 1 hypothetical protein NP_865352.1 1630685 R 243090 CDS NP_865353.1 32472359 1796028 1633849..1634319 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:D83643; hypothetical protein PA0015 [imported] - Pseudomonas; E=0.011 pir:F70422; hypothetical protein aq_1409 - Aquifex aeolicus -----; E=0.065 gb:AAF06042.1; AC009360_7 (AC009360) F16G16.8 [Arabidopsis; E=0.68 COG: PA0015; COG0457 TPR-repeat-containing proteins; E=0.001; hypothetical protein 1634319 1796028 RB3171 Rhodopirellula baltica SH 1 hypothetical protein NP_865353.1 1633849 D 243090 CDS NP_865354.1 32472360 1793459 complement(1634326..1634919) 1 NC_005027.1 hypothetical protein 1634919 1793459 RB3172 Rhodopirellula baltica SH 1 hypothetical protein NP_865354.1 1634326 R 243090 CDS NP_865355.1 32472361 1793329 complement(1634867..1636054) 1 NC_005027.1 PMID: 7934829 best DB hits: BLAST: swissprot:O67444; YE64_AQUAE HYPOTHETICAL PROTEIN AQ_1464 -----; E=4e-47 pir:T36871; probable pseudouridine synthase - Streptomyces; E=1e-40 swissprot:O33210; YH11_MYCTU HYPOTHETICAL 27.6 KDA PROTEIN RV1711; E=9e-38 COG: aq_1464; COG1187 16S rRNA uridine-516 pseudouridylate synthase and; E=3e-48 PFAM: PF01479; S4 domain; E=3.1e-11 PF00849; RNA pseudouridylate synthase; E=6.5e-13; ribosomal large subunit pseudouridine synthase B 1636054 1793329 RB3174 Rhodopirellula baltica SH 1 ribosomal large subunit pseudouridine synthase B NP_865355.1 1634867 R 243090 CDS NP_865356.1 32472362 1796709 complement(1636311..1637498) 1 NC_005027.1 PMID: 8763940 PMID: 9387221 best DB hits: BLAST: swissprot:P22806; BIOF_BACSH 8-AMINO-7-OXONONANOATE SYNTHASE; E=1e-57 swissprot:P53556; BIOF_BACSU 8-AMINO-7-OXONONANOATE SYNTHASE; E=7e-57 ddbj:BAB07626.1; (AP001520) 8-amino-7-oxononanoate synthase; E=2e-51 COG: BS_bioF; COG0156 7-keto-8-aminopelargonate synthetase and related; E=6e-58 PFAM: PF01053; Cys/Met metabolism PLP-depend; E=0.00067 PF00222; Aminotransferase class-II; E=1.6e-74; 8-amino-7-oxononanoate synthase 1637498 1796709 RB3176 Rhodopirellula baltica SH 1 8-amino-7-oxononanoate synthase NP_865356.1 1636311 R 243090 CDS NP_865357.1 32472363 1793928 complement(1637524..1639647) 1 NC_005027.1 PMID: 9634230 best DB hits: BLAST: pir:F70837; probable sulfatase (EC 3.1.6.-) atsG - Mycobacterium; E=4e-25 prf:2204388A; sulphamidase [Homo sapiens]; E=1e-17 gb:AAF55607.1; (AE003724) CG14291 gene product [Drosophila; E=7e-17 COG: Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=4e-26 PA0924; COG3083 Predicted hydrolase of alkaline phosphatase; E=0.002 PFAM: PF00884; Sulfatase; E=1.3e-07; sulfatase atsG 1639647 1793928 RB3177 Rhodopirellula baltica SH 1 sulfatase atsG NP_865357.1 1637524 R 243090 CDS NP_865358.1 32472364 1792496 complement(1639538..1641973) 1 NC_005027.1 PMID: 10688204 best DB hits: BLAST: pir:B81282; probable integral membrane protein Cj1373 [imported] -; E=3e-08 pir:H71453; hypothetical protein PH0287 - Pyrococcus horikoshii; E=1e-06 pir:A75018; transport protein PAB1101 - Pyrococcus abyssi (strain; E=2e-05 COG: Cj1373; COG1033 Membrane proteins related to SecD/SecF; E=3e-09; hypothetical protein 1641973 1792496 RB3179 Rhodopirellula baltica SH 1 hypothetical protein NP_865358.1 1639538 R 243090 CDS NP_865359.1 32472365 1793173 complement(1642085..1645993) 1 NC_005027.1 PMID: 10688204 best DB hits: BLAST: pir:E71280; probable antibiotic transport protein - syphilis; E=2e-05 pir:B81282; probable integral membrane protein Cj1373 [imported] -; E=3e-04 pir:D70131; conserved hypothetical integral membrane protein BB0252 -; E=0.003 COG: TP0790; COG1033 Membrane proteins related to SecD/SecF; E=2e-06 PFAM: PF01218; Coproporphyrinogen III oxidas; E=0.021; hypothetical protein 1645993 1793173 RB3185 Rhodopirellula baltica SH 1 hypothetical protein NP_865359.1 1642085 R 243090 CDS NP_865360.1 32472366 1791294 1646085..1646393 1 NC_005027.1 hypothetical protein 1646393 1791294 RB3189 Rhodopirellula baltica SH 1 hypothetical protein NP_865360.1 1646085 D 243090 CDS NP_865361.1 32472367 1795452 complement(1646093..1646326) 1 NC_005027.1 hypothetical protein 1646326 1795452 RB3190 Rhodopirellula baltica SH 1 hypothetical protein NP_865361.1 1646093 R 243090 CDS NP_865362.1 32472368 1790845 complement(1646344..1646541) 1 NC_005027.1 hypothetical protein 1646541 1790845 RB3192 Rhodopirellula baltica SH 1 hypothetical protein NP_865362.1 1646344 R 243090 CDS NP_865363.1 32472369 1791610 1646511..1647647 1 NC_005027.1 PMID: 8616240 best DB hits: BLAST: pir:T36008; probable transaldolase - Streptomyces coelicolor -----; E=7e-21 swissprot:O06812; TAL_MYCTU TRANSALDOLASE ----- pir: C70917; E=3e-17 pir:T48589; transaldolase-like protein - Arabidopsis thaliana; E=3e-17 COG: Rv1448c; COG0176 Transaldolase; E=3e-18 PFAM: PF00923; Transaldolase; E=0.78; transaldolase 1647647 1791610 RB3193 Rhodopirellula baltica SH 1 transaldolase NP_865363.1 1646511 D 243090 CDS NP_865364.1 32472370 1790980 complement(1647492..1648058) 1 NC_005027.1 hypothetical protein 1648058 1790980 RB3194 Rhodopirellula baltica SH 1 hypothetical protein NP_865364.1 1647492 R 243090 CDS NP_865365.1 32472371 1796308 complement(1648239..1650068) 1 NC_005027.1 PMID: 8034700 PMID: 8058761 best DB hits: BLAST: pir:F70144; carboxyl-terminal processing proteinase (ctp) homolog -; E=1e-42 pir:A71677; tail-specific proteinase precursor (ctp) RP228 -; E=2e-41 pir:B83005; probable carboxyl-terminal proteinase PA5134 [imported]; E=8e-40 COG: BB0359; COG0793 Periplasmic protease; E=1e-43 PFAM: PF00515; TPR Domain; E=0.18 PF00595; PDZ domain (Also known as DHR or GLG; E=4.7e-05; carboxyl-terminal processing protease 1650068 ctpA 1796308 ctpA Rhodopirellula baltica SH 1 carboxyl-terminal processing protease NP_865365.1 1648239 R 243090 CDS NP_865366.1 32472372 1795009 1650093..1650422 1 NC_005027.1 hypothetical protein 1650422 1795009 RB3196 Rhodopirellula baltica SH 1 hypothetical protein NP_865366.1 1650093 D 243090 CDS NP_865367.1 32472373 1789942 complement(1650460..1650780) 1 NC_005027.1 hypothetical protein 1650780 1789942 RB3197 Rhodopirellula baltica SH 1 hypothetical protein NP_865367.1 1650460 R 243090 CDS NP_865368.1 32472374 1795254 complement(1650822..1651232) 1 NC_005027.1 hypothetical protein 1651232 1795254 RB3200 Rhodopirellula baltica SH 1 hypothetical protein NP_865368.1 1650822 R 243090 CDS NP_865369.1 32472375 1792228 complement(1651271..1651600) 1 NC_005027.1 hypothetical protein 1651600 1792228 RB3201 Rhodopirellula baltica SH 1 hypothetical protein NP_865369.1 1651271 R 243090 CDS NP_865370.1 32472376 1792867 complement(1651616..1651732) 1 NC_005027.1 hypothetical protein 1651732 1792867 RB3202 Rhodopirellula baltica SH 1 hypothetical protein NP_865370.1 1651616 R 243090 CDS NP_865371.1 32472377 1796666 1651706..1651882 1 NC_005027.1 hypothetical protein 1651882 1796666 RB3203 Rhodopirellula baltica SH 1 hypothetical protein NP_865371.1 1651706 D 243090 CDS NP_865372.1 32472378 1794738 complement(1651849..1652079) 1 NC_005027.1 hypothetical protein 1652079 1794738 RB3205 Rhodopirellula baltica SH 1 hypothetical protein NP_865372.1 1651849 R 243090 CDS NP_865373.1 32472379 1789985 1652052..1652453 1 NC_005027.1 hypothetical protein 1652453 1789985 RB3207 Rhodopirellula baltica SH 1 hypothetical protein NP_865373.1 1652052 D 243090 CDS NP_865374.1 32472380 1796305 complement(1652111..1652398) 1 NC_005027.1 hypothetical protein 1652398 1796305 RB3208 Rhodopirellula baltica SH 1 hypothetical protein NP_865374.1 1652111 R 243090 CDS NP_865375.1 32472381 1794465 complement(1652391..1652681) 1 NC_005027.1 hypothetical protein 1652681 1794465 RB3210 Rhodopirellula baltica SH 1 hypothetical protein NP_865375.1 1652391 R 243090 CDS NP_865376.1 32472382 1794923 complement(1652507..1652671) 1 NC_005027.1 signal peptide 1652671 1794923 RB3212 Rhodopirellula baltica SH 1 signal peptide NP_865376.1 1652507 R 243090 CDS NP_865377.1 32472383 1793522 complement(1652671..1654254) 1 NC_005027.1 PMID: 11823852; hypothetical protein 1654254 1793522 RB3213 Rhodopirellula baltica SH 1 hypothetical protein NP_865377.1 1652671 R 243090 CDS NP_865378.1 32472384 1791657 complement(1654251..1654745) 1 NC_005027.1 PMID: 11073910 best DB hits: BLAST: swissprot:Q57763; Y315_METJA HYPOTHETICAL PROTEIN MJ0315 -----; E=1e-08 pir:B75030; hypothetical protein PAB1162 - Pyrococcus abyssi (strain; E=4e-07 pir:H71215; hypothetical protein PH1992 - Pyrococcus horikoshii; E=3e-06 COG: MJ0315; COG1586 S-adenosylmethionine decarboxylase; E=1e-09 PFAM: PF02576; Uncharacterized BCR, YhbC family COG; E=0.88 PF02675; S-adenosylmethionine decarboxylase; E=1.7e-10; S-adenosylmethionine decarboxylase proenzyme 1654745 speD 1791657 speD Rhodopirellula baltica SH 1 S-adenosylmethionine decarboxylase proenzyme NP_865378.1 1654251 R 243090 CDS NP_865379.1 32472385 1792464 complement(1654804..1656024) 1 NC_005027.1 best DB hits: BLAST: pir:E69789; hypothetical protein ydjI - Bacillus subtilis -----; E=3e-25 gb:AAK05447.1; AE006367_3 (AE006367) UNKNOWN PROTEIN [Lactococcus; E=6e-06 ddbj:BAB05524.1; (AP001513) BH1805~unknown conserved protein in; E=7e-05; hypothetical protein 1656024 1792464 RB3221 Rhodopirellula baltica SH 1 hypothetical protein NP_865379.1 1654804 R 243090 CDS NP_865380.1 32472386 1793048 1656004..1656450 1 NC_005027.1 hypothetical protein 1656450 1793048 RB3224 Rhodopirellula baltica SH 1 hypothetical protein NP_865380.1 1656004 D 243090 CDS NP_865381.1 32472387 1790097 complement(1656410..1656550) 1 NC_005027.1 hypothetical protein 1656550 1790097 RB3226 Rhodopirellula baltica SH 1 hypothetical protein NP_865381.1 1656410 R 243090 CDS NP_865382.1 32472388 1790722 1656635..1659523 1 NC_005027.1 hypothetical protein 1659523 1790722 RB3228 Rhodopirellula baltica SH 1 hypothetical protein NP_865382.1 1656635 D 243090 CDS NP_865383.1 32472389 1794436 1659575..1660978 1 NC_005027.1 hypothetical protein 1660978 1794436 RB3232 Rhodopirellula baltica SH 1 hypothetical protein NP_865383.1 1659575 D 243090 CDS NP_865384.1 32472390 1792450 complement(1661003..1661179) 1 NC_005027.1 hypothetical protein 1661179 1792450 RB3233 Rhodopirellula baltica SH 1 hypothetical protein NP_865384.1 1661003 R 243090 CDS NP_865385.1 32472391 1794342 complement(1661176..1662120) 1 NC_005027.1 PMID: 1482681 best DB hits: BLAST: embl:CAB59581.1; (AL132662) possible gluconolactonase precursor; E=2e-26 pir:A75539; probable gluconolactonase - Deinococcus radiodurans; E=8e-20 pir:B82698; gluconolactonase precursor XF1297 [imported] - Xylella; E=8e-16 COG: DR0277; COG3386 Uncharacterized protein; E=8e-21; gluconolactonase precursor 1662120 1794342 RB3234 Rhodopirellula baltica SH 1 gluconolactonase precursor NP_865385.1 1661176 R 243090 CDS NP_865386.1 32472392 1794564 complement(1662038..1663570) 1 NC_005027.1 PMID: 9923682 PMID: 7890707 best DB hits: BLAST: pir:E71961; probable transporter - Helicobacter pylori (strain J99); E=2e-51 pir:F64546; sodium-dependent transporter - Helicobacter pylori; E=8e-51 ddbj:BAA96091.1; (AB043024) sodium sulfate or dicarboxylate; E=1e-45 COG: jhp0200; COG0471 Di- and tricarboxylate transporters; E=2e-52 PAB1107; COG1055 Na+/H+ antiporter NhaD and related arsenite; E=0.001 sll0640; COG0471 Di- and tricarboxylate transporters; E=0.006 PFAM: PF00939; Sodium:sulfate symporter transm; E=1.6e-12; transporter 1663570 1794564 RB3236 Rhodopirellula baltica SH 1 transporter NP_865386.1 1662038 R 243090 CDS NP_865387.1 32472393 1792641 complement(1663567..1664016) 1 NC_005027.1 best DB hits: BLAST: pir:S34725; regulation protein - Serratia marcescens ----- embl:; E=3e-14 swissprot:P11555; FUCU_ECOLI FUCOSE OPERON FUCU PROTEIN -----; E=0.017 pir:H82496; ribose ABC transporter protein VCA0127 [imported] -; E=0.37 COG: fucU; COG1869 Uncharacterized components of ribose/xylose transport; E=0.002; hypothetical protein 1664016 1792641 RB3237 Rhodopirellula baltica SH 1 hypothetical protein NP_865387.1 1663567 R 243090 CDS NP_865388.1 32472394 1794391 complement(1664080..1664898) 1 NC_005027.1 best DB hits: BLAST: swissprot:Q9WYP7; Y416_THEMA HYPOTHETICAL PROTEIN TM0416 -----; E=4e-13 swissprot:O50580; DT3E_PSECI D-TAGATOSE 3-EPIMERASE -----; E=8e-11 swissprot:P73599; YD04_SYNY3 HYPOTHETICAL 32.8 KDA PROTEIN SLL1304; E=4e-10 COG: TM0416; COG1082 Predicted endonucleases; E=4e-14; D-tagatose 3-epimerase 1664898 1794391 RB3239 Rhodopirellula baltica SH 1 D-tagatose 3-epimerase NP_865388.1 1664080 R 243090 CDS NP_865389.1 32472395 1793112 1665040..1665639 1 NC_005027.1 PMID: 7540828 PMID: 8878048 best DB hits: BLAST: gb:AAK03433.1; (AE006173) SlyD [Pasteurella multocida]; E=9e-21 gb:AAC45696.1; (U92229) macrophage infectivity potentiator; E=5e-19 swissprot:P44760; FKBY_HAEIN PROBABLE FKBP-TYPE PEPTIDYL-PROLYL; E=1e-18 COG: HI0574; COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1; E=9e-20 PFAM: PF00254; FKBP-type peptidyl-prolyl cis-trans; E=8.4e-32; FKBP-type peptidylprolyl isomerase 1665639 fkpA 1793112 fkpA Rhodopirellula baltica SH 1 FKBP-type peptidylprolyl isomerase NP_865389.1 1665040 D 243090 CDS NP_865390.1 32472396 1791350 complement(1665732..1667051) 1 NC_005027.1 PMID: 12024217; hypothetical protein 1667051 1791350 RB3242 Rhodopirellula baltica SH 1 hypothetical protein NP_865390.1 1665732 R 243090 CDS NP_865391.1 32472397 1797007 complement(1666949..1667233) 1 NC_005027.1 hypothetical protein 1667233 1797007 RB3244 Rhodopirellula baltica SH 1 hypothetical protein NP_865391.1 1666949 R 243090 CDS NP_865392.1 32472398 1792836 1667272..1668279 1 NC_005027.1 PMID: 11298281 best DB hits: BLAST: gb:AAF81068.1; AF223364_3 (AF223364) protein phosphatase 1; E=3e-27 pir:E71538; hypothetical protein CT259 - Chlamydia trachomatis; E=5e-26 embl:CAA10712.1; (AJ132604) pppL protein [Lactococcus lactis]; E=2e-25 COG: CT259; COG0631 Protein serine/threonine phosphatases; E=4e-27 PFAM: PF00481; Protein phosphatase 2C; E=1.2e-09; protein phosphatase 1 1668279 1792836 RB3245 Rhodopirellula baltica SH 1 protein phosphatase 1 NP_865392.1 1667272 D 243090 CDS NP_865393.1 32472399 1790200 complement(1668390..1668665) 1 NC_005027.1 hypothetical protein 1668665 1790200 RB3247 Rhodopirellula baltica SH 1 hypothetical protein NP_865393.1 1668390 R 243090 CDS NP_865394.1 32472400 1793248 1668660..1670687 1 NC_005027.1 best DB hits: BLAST: pir:G83038; probable sensorresponse regulator hybrid PA4856; E=0.74; hypothetical protein 1670687 1793248 RB3248 Rhodopirellula baltica SH 1 hypothetical protein NP_865394.1 1668660 D 243090 CDS NP_865395.1 32472401 1790903 1670684..1672903 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S76102; hypothetical protein slr0359 - Synechocystis sp. (strain; E=3e-99 pir:S76238; hypothetical protein sll0267 - Synechocystis sp. (strain; E=2e-89 pir:S77565; hypothetical protein slr2077 - Synechocystis sp. (strain; E=5e-88 COG: PA0575_4; COG2200 Diguanylate cyclase/phosphodiesterase domain 2; E=1e-59 PFAM: PF00900; Ribosomal family S4e; E=0.72 PF00072; Response regulator receiver dom; E=3.8e-29 PF00785; PAC motif; E=0.054; hypothetical protein 1672903 1790903 RB3251 Rhodopirellula baltica SH 1 hypothetical protein NP_865395.1 1670684 D 243090 CDS NP_865396.1 32472402 1794369 complement(1672993..1673976) 1 NC_005027.1 hypothetical protein 1673976 1794369 RB3252 Rhodopirellula baltica SH 1 hypothetical protein NP_865396.1 1672993 R 243090 CDS NP_865397.1 32472403 1790298 complement(1673976..1675049) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAA75396.1; (AB013378) YhaQ [Bacillus halodurans]; E=1e-38 pir:T36523; probable ABC-type transport system ATP-binding protein -; E=2e-38 ddbj:BAB04722.1; (AP001510) ABC transporter (ATP-binding protein); E=4e-38 COG: BH1003; COG1131 ABC-type multidrug transport system, ATPase; E=3e-39 PFAM: PF01495; HypB/UreG nucleotide-binding; E=0.28 PF02223; Thymidylate kinase; E=0.38 PF00005; ABC transporter; E=2.4e-41; ABC transporter ATP-binding protein 1675049 1790298 RB3253 Rhodopirellula baltica SH 1 ABC transporter ATP-binding protein NP_865397.1 1673976 R 243090 CDS NP_865398.1 32472404 1793836 1675178..1676410 1 NC_005027.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 1676410 argJ 1793836 argJ Rhodopirellula baltica SH 1 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase NP_865398.1 1675178 D 243090 CDS NP_865399.1 32472405 1794957 1676574..1676996 1 NC_005027.1 PMID: 12004073; hypothetical protein 1676996 1794957 RB3256 Rhodopirellula baltica SH 1 hypothetical protein NP_865399.1 1676574 D 243090 CDS NP_865400.1 32472406 1791631 1677159..1677374 1 NC_005027.1 PMID: 11932238; hypothetical protein 1677374 1791631 RB3257 Rhodopirellula baltica SH 1 hypothetical protein NP_865400.1 1677159 D 243090 CDS NP_865401.1 32472407 1795721 complement(1677173..1677397) 1 NC_005027.1 hypothetical protein 1677397 1795721 RB3258 Rhodopirellula baltica SH 1 hypothetical protein NP_865401.1 1677173 R 243090 CDS NP_865402.1 32472408 1796119 1677371..1677556 1 NC_005027.1 hypothetical protein 1677556 1796119 RB3259 Rhodopirellula baltica SH 1 hypothetical protein NP_865402.1 1677371 D 243090 CDS NP_865403.1 32472409 1791689 complement(1677574..1677798) 1 NC_005027.1 hypothetical protein 1677798 1791689 RB3260 Rhodopirellula baltica SH 1 hypothetical protein NP_865403.1 1677574 R 243090 CDS NP_865404.1 32472410 1791864 complement(1677717..1678001) 1 NC_005027.1 hypothetical protein 1678001 1791864 RB3261 Rhodopirellula baltica SH 1 hypothetical protein NP_865404.1 1677717 R 243090 CDS NP_865405.1 32472411 1792587 1678132..1678518 1 NC_005027.1 PMID: 10952301 best DB hits: BLAST: pir:F82405; glyoxylase I family protein VCA0890 [imported] - Vibrio; E=0.41 PFAM: PF00903; Glyoxalase/Bleomycin resistance pr; E=0.0022; glyoxylase I family protein 1678518 1792587 RB3262 Rhodopirellula baltica SH 1 glyoxylase I family protein NP_865405.1 1678132 D 243090 CDS NP_865406.1 32472412 1792548 complement(1678635..1679711) 1 NC_005027.1 PMID: 1537789 PMID: 8472911 PMID: 8994968 best DB hits: BLAST: embl:CAB02496.1; (Z80356) glucose-fructose oxidoreductase; E=5e-07 pdb:1OFG; A Chain A, Glucose-Fructose Oxidoreductase -----; E=5e-07 pdb:1EVJ; A Chain A, Crystal Structure Of Glucose-Fructose; E=5e-07 COG: BH1248; COG0673 Predicted dehydrogenases and related proteins; E=1e-06 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=5.1e-14 PF00431; CUB domain; E=0.64; glucose-fructose oxidoreductase 1679711 gfo 1792548 gfo Rhodopirellula baltica SH 1 glucose-fructose oxidoreductase NP_865406.1 1678635 R 243090 CDS NP_865407.1 32472413 1795339 complement(1679865..1680830) 1 NC_005027.1 best DB hits: BLAST: swissprot:Q45480; YLYB_BACSU HYPOTHETICAL 33.7 KD PROTEIN IN; E=4e-31 swissprot:P50513; RLUD_ZYMMO RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE; E=2e-30 ddbj:BAB06261.1; (AP001515) BH2542~unknown conserved protein; E=3e-30 COG: BH2542; COG0564 Pseudouridylate synthases, 23S RNA-specific; E=3e-31 PFAM: PF01479; S4 domain; E=5.2e-10 PF00849; RNA pseudouridylate synthase; E=6.4e-30; ribosomal large subunit pseudouridine synthase D 1680830 rluD 1795339 rluD Rhodopirellula baltica SH 1 ribosomal large subunit pseudouridine synthase D NP_865407.1 1679865 R 243090 CDS NP_865408.1 32472414 1796989 complement(1680916..1682214) 1 NC_005027.1 hypothetical protein 1682214 1796989 RB3267 Rhodopirellula baltica SH 1 hypothetical protein NP_865408.1 1680916 R 243090 CDS NP_865409.1 32472415 1791517 complement(1682308..1683003) 1 NC_005027.1 hypothetical protein 1683003 1791517 RB3268 Rhodopirellula baltica SH 1 hypothetical protein NP_865409.1 1682308 R 243090 CDS NP_865410.1 32472416 1794851 1683018..1684001 1 NC_005027.1 PMID: 8969512 best DB hits: BLAST: gb:AAF73695.1; (AE002226) serinethreonine-protein kinase; E=6e-30 pir:G71532; probable threoninetyrosine-specific protein kinase (EC; E=3e-29 gb:AAF73573.1; (AE002326) serinethreonine protein kinase; E=1e-28 COG: CT301_1; COG0515 Serine/threonine protein kinases; E=3e-30 PFAM: PF00069; Protein kinase domain; E=0.0026; serine/threonine-protein kinase pknB 1684001 pknB 1794851 pknB Rhodopirellula baltica SH 1 serine/threonine-protein kinase pknB NP_865410.1 1683018 D 243090 CDS NP_865411.1 32472417 1792194 1683998..1684729 1 NC_005027.1 PMID: 8863738 best DB hits: BLAST: gb:AAF89615.1; AF167433_1 (AF167433) gyrase B [Thermus; E=5e-18 pir:JC4960; DNA topoisomerase (ATP-hydrolyzing) (EC 5.99.1.3) B -; E=1e-16 swissprot:P77993; GYRB_THEMA DNA GYRASE SUBUNIT B (TOPOISOMERASE; E=1e-16 COG: TM0833; COG0187 DNA gyrase (topoisomerase II) B subunit; E=1e-17 PFAM: PF01751; Toprim domain; E=0.81; DNA gyrase subunit B 1684729 gyrB 1792194 gyrB Rhodopirellula baltica SH 1 DNA gyrase subunit B NP_865411.1 1683998 D 243090 CDS NP_865412.1 32472418 1793078 complement(1684712..1685734) 1 NC_005027.1 PMID: 9278503 best DB hits: BLAST: pir:E65030; hypothetical protein b2534 - Escherichia coli (strain; E=3e-07 gb:AAG57647.1; AE005483_6 (AE005483) enzyme (3.4.-); E=3e-07 gb:AAF51169.1; (AE003581) Bem46 gene product [Drosophila; E=2e-06 COG: yfhR; COG1073 Hydrolases of the alpha/beta superfamily; E=3e-08 VC1451; COG2931 RTX toxins and related Ca2+-binding proteins; E=0.001 PA3695; COG1073 Hydrolases of the alpha/beta superfamily; E=0.004 PFAM: PF00561; alpha/beta hydrolase fold; E=0.37; hypothetical protein 1685734 1793078 RB3274 Rhodopirellula baltica SH 1 hypothetical protein NP_865412.1 1684712 R 243090 CDS NP_865413.1 32472419 1795834 1685794..1686438 1 NC_005027.1 hypothetical protein 1686438 1795834 RB3276 Rhodopirellula baltica SH 1 hypothetical protein NP_865413.1 1685794 D 243090 CDS NP_865414.1 32472420 1795046 complement(1685887..1686552) 1 NC_005027.1 hypothetical protein 1686552 1795046 RB3277 Rhodopirellula baltica SH 1 hypothetical protein NP_865414.1 1685887 R 243090 CDS NP_865415.1 32472421 1790545 complement(1686539..1686862) 1 NC_005027.1 hypothetical protein 1686862 1790545 RB3280 Rhodopirellula baltica SH 1 hypothetical protein NP_865415.1 1686539 R 243090 CDS NP_865416.1 32472422 1793753 complement(1686853..1687272) 1 NC_005027.1 PMID: 1644313 PMID: 7765961 PMID: 6300069 PMID: 3566914 PMID: 6540370 PMID: 7500343 best DB hits: BLAST: swissprot:P02346; DBH_BACST DNA-BINDING PROTEIN II (HB) (HU); E=2e-13 prf:1702428A; DNA binding protein HU [Bacillus caldolyticus]; E=1e-12 swissprot:P08821; DBH_BACSU DNA-BINDING PROTEIN II (HB) (HU); E=4e-12 COG: BS_hbs; COG0776 Bacterial nucleoid DNA-binding protein; E=4e-13 PFAM: PF00216; Bacterial DNA-binding protein; E=2.5e-29; DNA-binding protein HU 1687272 hup 1793753 hup Rhodopirellula baltica SH 1 DNA-binding protein HU NP_865416.1 1686853 R 243090 CDS NP_865417.1 32472423 1793634 complement(1687415..1687864) 1 NC_005027.1 PMID: 9923682 best DB hits: BLAST: swissprot:Q9ZMG1; Y274_HELPJ HYPOTHETICAL PROTEIN HP0274JHP0259; E=8e-18 swissprot:P56132; Y274_HELPY HYPOTHETICAL PROTEIN HP0274 -----; E=3e-16 pir:C81395; hypothetical protein Cj0496 [imported] - Campylobacter; E=1e-13 COG: jhp0259; COG0727 Predicted Fe-S-cluster oxidoreductase; E=7e-19; hypothetical protein 1687864 1793634 RB3283 Rhodopirellula baltica SH 1 hypothetical protein NP_865417.1 1687415 R 243090 CDS NP_865418.1 32472424 1790043 1687874..1688008 1 NC_005027.1 hypothetical protein 1688008 1790043 RB3285 Rhodopirellula baltica SH 1 hypothetical protein NP_865418.1 1687874 D 243090 CDS NP_865419.1 32472425 1790948 complement(1688005..1688130) 1 NC_005027.1 hypothetical protein 1688130 1790948 RB3286 Rhodopirellula baltica SH 1 hypothetical protein NP_865419.1 1688005 R 243090 CDS NP_865420.1 32472426 1796799 1688084..1689667 1 NC_005027.1 PMID: 2188958 best DB hits: BLAST: gb:AAF43869.1; AF166114_81 (AF166114) probable transport protein; E=3e-22 gb:AAG19353.1; (AE005030) spermidineputrescine ABC transporter; E=7e-22 pir:B81966; probable ABC transport ATP-binding protein NMA0485; E=7e-22 COG: VNG0921G; COG1130 ABC-type sugar/spermidine/putrescine transport; E=6e-23 NMB1966; COG1127 Uncharacterized ABC-type transport system, ATPase; E=9e-23 slr1455; COG1118 ABC-type sulfate/molybdate transport systems,; E=3e-22 PFAM: PF01078; Magnesium chelatase, subunit Chl; E=0.58 PF00005; ABC transporter; E=2.1e-43 PF02405; Domain of unknown function DUF14; E=7.9e-07; sulfate ABC transport ATP-binding protein 1689667 cysA 1796799 cysA Rhodopirellula baltica SH 1 sulfate ABC transport ATP-binding protein NP_865420.1 1688084 D 243090 CDS NP_865421.1 32472427 1791601 1689687..1689857 1 NC_005027.1 hypothetical protein 1689857 1791601 RB3291 Rhodopirellula baltica SH 1 hypothetical protein NP_865421.1 1689687 D 243090 CDS NP_865422.1 32472428 1794480 1689919..1691202 1 NC_005027.1 PMID: 3058702 best DB hits: BLAST: gb:AAG53588.1; AF248314_3 (AF248314) DAPA aminotransferase BioA; E=2e-95 swissprot:P53656; BIOA_ERWHE; E=3e-92 gb:AAG60578.1; AF250776_2 (AF250776) DAPA-aminotransferase BioA; E=3e-91 COG: bioA; COG0161 Adenosylmethionine-8-amino-7-oxononanoate; E=3e-92 PFAM: PF00202; Aminotransferase class-III; E=3e-129; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1691202 bioA 1794480 bioA Rhodopirellula baltica SH 1 adenosylmethionine-8-amino-7-oxononanoate aminotransferase NP_865422.1 1689919 D 243090 CDS NP_865423.1 32472429 1792171 complement(1691190..1692062) 1 NC_005027.1 hypothetical protein 1692062 1792171 RB3293 Rhodopirellula baltica SH 1 hypothetical protein NP_865423.1 1691190 R 243090 CDS NP_865424.1 32472430 1792352 complement(1692259..1692681) 1 NC_005027.1 signal peptide 1692681 1792352 RB3295 Rhodopirellula baltica SH 1 signal peptide NP_865424.1 1692259 R 243090 CDS NP_865425.1 32472431 1796591 complement(1692678..1692797) 1 NC_005027.1 hypothetical protein 1692797 1796591 RB3298 Rhodopirellula baltica SH 1 hypothetical protein NP_865425.1 1692678 R 243090 CDS NP_865426.1 32472432 1796237 complement(1692925..1693917) 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein 1693917 1796237 RB3299 Rhodopirellula baltica SH 1 hypothetical protein NP_865426.1 1692925 R 243090 CDS NP_865427.1 32472433 1791174 complement(1694056..1694208) 1 NC_005027.1 hypothetical protein 1694208 1791174 RB3301 Rhodopirellula baltica SH 1 hypothetical protein NP_865427.1 1694056 R 243090 CDS NP_865428.1 32472434 1794859 complement(1694269..1694481) 1 NC_005027.1 hypothetical protein 1694481 1794859 RB3302 Rhodopirellula baltica SH 1 hypothetical protein NP_865428.1 1694269 R 243090 CDS NP_865429.1 32472435 1792421 complement(1694447..1695709) 1 NC_005027.1 PMID: 9371463 best DB hits: BLAST: pir:B69061; hypothetical protein MTH1458 - Methanobacterium; E=9e-51 PFAM: PF00633; Helix-hairpin-helix motif.; E=0.049; hypothetical protein 1695709 1792421 RB3303 Rhodopirellula baltica SH 1 hypothetical protein NP_865429.1 1694447 R 243090 CDS NP_865430.1 32472436 1795810 complement(1695663..1695842) 1 NC_005027.1 hypothetical protein 1695842 1795810 RB3304 Rhodopirellula baltica SH 1 hypothetical protein NP_865430.1 1695663 R 243090 CDS NP_865431.1 32472437 1791813 1695825..1697258 1 NC_005027.1 hypothetical protein 1697258 1791813 RB3305 Rhodopirellula baltica SH 1 hypothetical protein NP_865431.1 1695825 D 243090 CDS NP_865432.1 32472438 1790352 1697377..1699431 1 NC_005027.1 PMID: 8020961 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=3e-39 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=3e-33 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=9e-32 COG: aslA; COG3119 Arylsulfatase A and related enzymes; E=1e-19 VC2041; COG3083 Predicted hydrolase of alkaline phosphatase; E=0.007 PFAM: PF00884; Sulfatase; E=4.4e-58; N-acetylgalactosamine 6-sulfatase (GALNS) 1699431 1790352 RB3309 Rhodopirellula baltica SH 1 N-acetylgalactosamine 6-sulfatase (GALNS) NP_865432.1 1697377 D 243090 CDS NP_865433.1 32472439 1795904 1699428..1700390 1 NC_005027.1 catalyzes the formation of 2-dehydropantoate from (R)-pantoate; 2-dehydropantoate 2-reductase 1700390 1795904 RB3312 Rhodopirellula baltica SH 1 2-dehydropantoate 2-reductase NP_865433.1 1699428 D 243090 CDS NP_865434.1 32472440 1795603 complement(1700394..1702646) 1 NC_005027.1 PMID: 10952301 best DB hits: BLAST: pir:E82042; conserved hypothetical protein VC2716 [imported] -; E=0.0 swissprot:P57072; YHGF_NEIMA HYPOTHETICAL PROTEIN NMA0194 -----; E=1e-179 swissprot:P71353; YHGF_HAEIN HYPOTHETICAL PROTEIN HI0568 -----; E=1e-177 COG: VC2716; COG2183 Predicted RNA binding protein, contains S1 domain; E=0.0 Rv1630; COG0539 Ribosomal protein S1; E=2e-06 BS_comEA; COG1555 DNA uptake protein and related DNA-binding; E=3e-06 PFAM: PF00633; Helix-hairpin-helix motif.; E=0.51 PF00575; S1 RNA binding domain; E=4.4e-25; RNA binding protein 1702646 1795603 RB3313 Rhodopirellula baltica SH 1 RNA binding protein NP_865434.1 1700394 R 243090 CDS NP_865435.1 32472441 1791490 complement(1702618..1703202) 1 NC_005027.1 PMID: 8444796 best DB hits: BLAST: pir:F72009; cell division protein FtsH, probable CP0857 [imported] -; E=2e-04 pir:D71463; probable ATP-dependent zinc proteinase - Chlamydia; E=4e-04 pir:F81725; cell division protein FtsH, probable TC0229 [imported] -; E=5e-04 COG: CPn0998; COG0465 ATP-dependent Zn proteases; E=2e-05 PFAM: PF01434; Peptidase M41; E=0.4; cell division protein FtsH 1703202 ftsH 1791490 ftsH Rhodopirellula baltica SH 1 cell division protein FtsH NP_865435.1 1702618 R 243090 CDS NP_865436.1 32472442 1790641 1703379..1704821 1 NC_005027.1 PMID: 9584149 best DB hits: BLAST: gb:AAC23913.1; (AF039207) NADH-dependent dehydrogenase homolog; E=3e-13 pir:B72359; lipopolysaccharide biosynthesis protein BplA -; E=2e-12 embl:CAC24034.1; (AL512980) ORF-c34_017 [Sulfolobus solfataricus]; E=2e-08 COG: TM0585; COG0673 Predicted dehydrogenases and related proteins; E=2e-13 PFAM: PF01408; Oxidoreductase, NAD-bin; E=1.1e-12; NADH-dependent dehydrogenase-like protein 1704821 1790641 RB3317 Rhodopirellula baltica SH 1 NADH-dependent dehydrogenase-like protein NP_865436.1 1703379 D 243090 CDS NP_865437.1 32472443 1791063 1704965..1706551 1 NC_005027.1 PMID: 11481432; signal peptide 1706551 1791063 RB3320 Rhodopirellula baltica SH 1 signal peptide NP_865437.1 1704965 D 243090 CDS NP_865438.1 32472444 1792204 complement(1706568..1706927) 1 NC_005027.1 PMID: 10952301 best DB hits: BLAST: pir:F82461; conserved hypothetical protein VCA0415 [imported] -; E=3e-33 gb:AAB81981.1; (AF025662) unknown [Vibrio cholerae]; E=1e-32 pir:A82473; conserved hypothetical protein VCA0338 [imported] -; E=4e-32 COG: VCA0415; COG3324 Uncharacterized BCR; E=3e-34 PFAM: PF00903; Glyoxalase/Bleomycin resistance pr; E=0.00045; hypothetical protein 1706927 1792204 RB3321 Rhodopirellula baltica SH 1 hypothetical protein NP_865438.1 1706568 R 243090 CDS NP_865439.1 32472445 1796144 complement(1707004..1709979) 1 NC_005027.1 PMID: 2544196 best DB hits: BLAST: swissprot:P56205; CYC_ASPNG CYTOCHROME C ----- pir: A61490; E=0.005 pir:S41568; cytochrome c - Emericella nidulans; E=0.025 swissprot:P38091; CYC_EMENI CYTOCHROME C ----- gb: AAB50255.1; E=0.025 PFAM: PF00034; Cytochrome c; E=0.0014; cytochrome c 1709979 1796144 RB3322 Rhodopirellula baltica SH 1 cytochrome c NP_865439.1 1707004 R 243090 CDS NP_865440.1 32472446 1796711 complement(1709976..1711454) 1 NC_005027.1 PMID: 12004073; signal peptide 1711454 1796711 RB3324 Rhodopirellula baltica SH 1 signal peptide NP_865440.1 1709976 R 243090 CDS NP_865441.1 32472447 1794140 1711353..1711640 1 NC_005027.1 hypothetical protein 1711640 1794140 RB3326 Rhodopirellula baltica SH 1 hypothetical protein NP_865441.1 1711353 D 243090 CDS NP_865442.1 32472448 1794708 1711372..1711680 1 NC_005027.1 hypothetical protein 1711680 1794708 RB3327 Rhodopirellula baltica SH 1 hypothetical protein NP_865442.1 1711372 D 243090 CDS NP_865443.1 32472449 1794290 1711598..1711795 1 NC_005027.1 hypothetical protein 1711795 1794290 RB3328 Rhodopirellula baltica SH 1 hypothetical protein NP_865443.1 1711598 D 243090 CDS NP_865444.1 32472450 1790583 complement(1711743..1711937) 1 NC_005027.1 hypothetical protein 1711937 1790583 RB3329 Rhodopirellula baltica SH 1 hypothetical protein NP_865444.1 1711743 R 243090 CDS NP_865445.1 32472451 1791844 complement(1711966..1713321) 1 NC_005027.1 PMID: 10484179 best DB hits: BLAST: ddbj:BAB05939.1; (AP001514) dehydrogenase [Bacillus halodurans]; E=1e-06 swissprot:O05389; YRBE_BACSU HYPOTHETICAL 37.8 KDA PROTEIN IN; E=3e-05 swissprot:Q44258; CBAC_ALCSB 1-CARBOXY-3-CHLORO-3,4-DIHYDROXYCYCLO; E=6e-05 COG: BH2220; COG0673 Predicted dehydrogenases and related proteins; E=1e-07 PFAM: PF01408; Oxidoreductase, NAD-bin; E=4.6e-08; dehydrogenase 1713321 1791844 RB3330 Rhodopirellula baltica SH 1 dehydrogenase NP_865445.1 1711966 R 243090 CDS NP_865446.1 32472452 1793236 1713290..1713472 1 NC_005027.1 hypothetical protein 1713472 1793236 RB3332 Rhodopirellula baltica SH 1 hypothetical protein NP_865446.1 1713290 D 243090 CDS NP_865447.1 32472453 1790315 1713409..1713528 1 NC_005027.1 hypothetical protein 1713528 1790315 RB3333 Rhodopirellula baltica SH 1 hypothetical protein NP_865447.1 1713409 D 243090 CDS NP_865448.1 32472454 1792795 complement(1713525..1713749) 1 NC_005027.1 hypothetical protein 1713749 1792795 RB3337 Rhodopirellula baltica SH 1 hypothetical protein NP_865448.1 1713525 R 243090 CDS NP_865449.1 32472455 1791373 complement(1713739..1714893) 1 NC_005027.1 PMID: 1761221 PMID: 112095 best DB hits: BLAST: ddbj:BAA97119.1; (AB035122); E=9e-09 pir:S76068; hypothetical protein - Synechocystis sp. (strain PCC; E=3e-08 swissprot:P26935; MI2D_BACSU MYO-INOSITOL 2-DEHYDROGENASE -----; E=1e-07 COG: slr0338; COG0673 Predicted dehydrogenases and related proteins; E=3e-09 PFAM: PF01408; Oxidoreductase, NAD-bin; E=6.7e-37; myo-inositol 2-dehydrogenase 1714893 idh 1791373 idh Rhodopirellula baltica SH 1 myo-inositol 2-dehydrogenase NP_865449.1 1713739 R 243090 CDS NP_865450.1 32472456 1792291 complement(1714857..1715687) 1 NC_005027.1 PMID: 8747459 best DB hits: BLAST: swissprot:O31458; YBFT_BACSU HYPOTHETICAL 27.3 KD PROTEIN IN; E=2e-44 swissprot:O35000; NAGB_BACSU GLUCOSAMINE-6-PHOSPHATE ISOMERASE; E=6e-43 swissprot:O97440; GNP2_GIALA GLUCOSAMINE-6-PHOSPHATE ISOMERASE 2; E=6e-41 COG: BS_ybfT; COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate; E=2e-45 PFAM: PF01182; Glucosamine-6-phosphate isome; E=3.7e-76; glucosamine-6-phosphate isomerase 2 1715687 1792291 RB3340 Rhodopirellula baltica SH 1 glucosamine-6-phosphate isomerase 2 NP_865450.1 1714857 R 243090 CDS NP_865451.1 32472457 1794849 complement(1715684..1716496) 1 NC_005027.1 best DB hits: BLAST: gb:AAC14880.1; (AF060080) hypothetical protein [Chlorobium; E=8e-12 embl:CAA77139.1; (Y18353) hypothetical protein [Thermus; E=4e-09 pir:C75001; hypothetical protein PAB1341 - Pyrococcus abyssi (strain; E=4e-09 COG: PAB1341; COG2120 Uncharacterized proteins, LmbE homologs; E=4e-10 PFAM: PF02585; Uncharacterized LmbE-like protein, C; E=8.8e-12; hypothetical protein 1716496 1794849 RB3342 Rhodopirellula baltica SH 1 hypothetical protein NP_865451.1 1715684 R 243090 CDS NP_865452.1 32472458 1796121 1716741..1717643 1 NC_005027.1 PMID: 9666063 best DB hits: BLAST: pir:G83352; transcriptional regulator MtlR PA2337 [imported] -; E=3e-30 gb:AAC34292.1; (AF047527) activator protein [Pseudomonas; E=2e-26 pir:G82221; transcriptional regulator AraCXylS family VC1260; E=2e-16 COG: PA2337; COG2207 AraC-type DNA-binding domain-containing proteins; E=3e-31 PFAM: PF00165; Bacterial regulatory helix-turn-heli; E=3.5e-21; activator protein MtlR 1717643 1796121 RB3345 Rhodopirellula baltica SH 1 activator protein MtlR NP_865452.1 1716741 D 243090 CDS NP_865453.1 32472459 1797103 complement(1717654..1719357) 1 NC_005027.1 best DB hits: PFAM: PF02369; Bacterial Ig-like domain (group 1); E=0.48; signal peptide 1719357 1797103 RB3346 Rhodopirellula baltica SH 1 signal peptide NP_865453.1 1717654 R 243090 CDS NP_865454.1 32472460 1792318 complement(1719459..1720634) 1 NC_005027.1 PMID: 1723410 PMID: 1400260 best DB hits: BLAST: pir:S75649; renin-binding protein-related protein - Synechocystis; E=1e-68 pdb:1FP3; A Chain A, Crystal Structure Of N-Acyl-D-Glucosamine; E=4e-54 swissprot:P51607; RNBP_RAT N-ACYLGLUCOSAMINE 2-EPIMERASE (GLCNAC; E=2e-53 COG: slr1975; COG2942 N-acyl-D-glucosamine 2-epimerase; E=1e-69; N-acylglucosamine 2-epimerase 1720634 1792318 RB3348 Rhodopirellula baltica SH 1 N-acylglucosamine 2-epimerase NP_865454.1 1719459 R 243090 CDS NP_865455.1 32472461 1792223 complement(1720638..1723328) 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S75887; hypothetical protein - Synechocystis sp. (strain PCC; E=4e-40 gb:AAF54633.1; (AE003691) CG6723 gene product [Drosophila; E=5e-32 swissprot:Q9XT77; SL56_RABIT SODIUM-DEPENDENT MULTIVITAMIN; E=6e-32 COG: sll1087; COG0591 Na+/proline, Na+/panthothenate symporters and; E=4e-41 RP571; COG0591 Na+/proline, Na+/panthothenate symporters and related; E=4e-13 BH2222; COG0591 Na+/proline, Na+/panthothenate symporters and; E=3e-12 PFAM: PF01344; Kelch motif; E=0.014 PF00474; Sodium:solute symporter family; E=1.5e-11; sodium:solute symporter 1723328 1792223 RB3349 Rhodopirellula baltica SH 1 sodium:solute symporter NP_865455.1 1720638 R 243090 CDS NP_865456.1 32472462 1792566 complement(1723325..1724293) 1 NC_005027.1 PMID: 8081752 PMID: 3909108 PMID: 10952301 best DB hits: BLAST: pir:E82157; probable N-acetylneuraminate lyase VC1776 [imported] -; E=2e-39 embl:CAC27797.1; (AJ271330) acylneuraminate lyase [Sus scrofa]; E=7e-36 gb:AAG18989.1; (AE004999) dihydrodipicolinate synthase; DapA; E=2e-18 COG: VC1776; COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate; E=2e-40 PFAM: PF00701; Dihydrodipicolinate synthetase famil; E=2.7e-23; N-acetylneuraminate lyase 1724293 nanA 1792566 nanA Rhodopirellula baltica SH 1 N-acetylneuraminate lyase NP_865456.1 1723325 R 243090 CDS NP_865457.1 32472463 1792895 complement(1724290..1725519) 1 NC_005027.1 PMID: 1400240 PMID: 8591030 best DB hits: BLAST: swissprot:Q02834; NANH_MICVI SIALIDASE PRECURSOR (NEURAMINIDASE); E=3e-40 pdb:1EUR; Sialidase ----- pdb: 1EUS Sialidase Complexed; E=3e-40 pdb:1EUU; Sialidase Or Neuraminidase, Large 68kd Form -----; E=3e-40 PFAM: PF02012; BNR repeat; E=0.1; sialidase [precursor] 1725519 1792895 RB3353 Rhodopirellula baltica SH 1 sialidase [precursor] NP_865457.1 1724290 R 243090 CDS NP_865458.1 32472464 1790578 1725578..1725703 1 NC_005027.1 hypothetical protein 1725703 1790578 RB3354 Rhodopirellula baltica SH 1 hypothetical protein NP_865458.1 1725578 D 243090 CDS NP_865459.1 32472465 1792943 1725716..1727881 1 NC_005027.1 PMID: 8021188 best DB hits: BLAST: swissprot:Q50233; MAUG_METME METHYLAMINE UTILIZATION PROTEIN MAUG; E=2e-05 pir:B82367; cytochrome-c peroxidase (EC 1.11.1.5) VC0089; E=4e-05 swissprot:Q50426; MAUG_METFL METHYLAMINE UTILIZATION PROTEIN MAUG; E=1e-04 COG: VC0089; COG1858 Cytochrome c peroxidase; E=4e-06; methylamine utilization protein mauG 1727881 1792943 RB3355 Rhodopirellula baltica SH 1 methylamine utilization protein mauG NP_865459.1 1725716 D 243090 CDS NP_865460.1 32472466 1797079 complement(1727856..1727969) 1 NC_005027.1 hypothetical protein 1727969 1797079 RB3358 Rhodopirellula baltica SH 1 hypothetical protein NP_865460.1 1727856 R 243090 CDS NP_865461.1 32472467 1794921 complement(1727941..1728156) 1 NC_005027.1 hypothetical protein 1728156 1794921 RB3359 Rhodopirellula baltica SH 1 hypothetical protein NP_865461.1 1727941 R 243090 CDS NP_865462.1 32472468 1796954 1727957..1728256 1 NC_005027.1 hypothetical protein 1728256 1796954 RB3360 Rhodopirellula baltica SH 1 hypothetical protein NP_865462.1 1727957 D 243090 CDS NP_865463.1 32472469 1794011 complement(1728283..1728546) 1 NC_005027.1 hypothetical protein 1728546 1794011 RB3362 Rhodopirellula baltica SH 1 hypothetical protein NP_865463.1 1728283 R 243090 CDS NP_865464.1 32472470 1790316 1728617..1730041 1 NC_005027.1 PMID: 2000090 PMID: 8552028 best DB hits: BLAST: pir:S77202; sensory transduction histidine kinase sll1687 -; E=1e-09 swissprot:Q46791; YGEK_ECOLI HYPOTHETICAL TRANSCRIPTIONAL; E=5e-07 swissprot:P23221; FIXJ_BRAJA transcriptional regulator; E=5e-07 COG: sll1687_1; COG2202 PAS/PAC domain; E=1e-10 ygeK; COG2771 DNA-binding HTH domains; E=4e-08 sll0779_1; COG2202 PAS/PAC domain; E=2e-07 PFAM: PF00989; PAS domain; E=0.032 PF00785; PAC motif; E=4.6e-09 PF00196; Bacterial regulatory proteins, luxR; E=1.4e-19; transcriptional regulator fixJ 1730041 1790316 RB3363 Rhodopirellula baltica SH 1 transcriptional regulator fixJ NP_865464.1 1728617 D 243090 CDS NP_865465.1 32472471 1795599 1730124..1730255 1 NC_005027.1 hypothetical protein 1730255 1795599 RB3365 Rhodopirellula baltica SH 1 hypothetical protein NP_865465.1 1730124 D 243090 CDS NP_865466.1 32472472 1790609 1730380..1730616 1 NC_005027.1 hypothetical protein 1730616 1790609 RB3366 Rhodopirellula baltica SH 1 hypothetical protein NP_865466.1 1730380 D 243090 CDS NP_865467.1 32472473 1790999 complement(1730753..1732018) 1 NC_005027.1 PMID: 9537320 best DB hits: BLAST: pir:H70355; hypothetical protein aq_627 - Aquifex aeolicus -----; E=1e-09 ddbj:BAA09665.1; (D63341) XylN outer membrane protein; E=3e-09 ddbj:BAA12149.1; (D83955) outer membrane protein [Pseudomonas; E=1e-08 COG: aq_627; COG2067 Long-chain fatty acid transport protein; E=1e-10; hypothetical protein 1732018 1790999 RB3367 Rhodopirellula baltica SH 1 hypothetical protein NP_865467.1 1730753 R 243090 CDS NP_865468.1 32472474 1790112 1731972..1732190 1 NC_005027.1 hypothetical protein 1732190 1790112 RB3369 Rhodopirellula baltica SH 1 hypothetical protein NP_865468.1 1731972 D 243090 CDS NP_865469.1 32472475 1796601 complement(1732176..1732355) 1 NC_005027.1 hypothetical protein 1732355 1796601 RB3370 Rhodopirellula baltica SH 1 hypothetical protein NP_865469.1 1732176 R 243090 CDS NP_865470.1 32472476 1791690 complement(1732288..1733667) 1 NC_005027.1 PMID: 9634230 best DB hits: BLAST: swissprot:Q10552; Y893_MYCTU HYPOTHETICAL 36.1 KDA PROTEIN RV0893C; E=3e-10 swissprot:Q50726; YX99_MYCTU HYPOTHETICAL 38.1 KDA PROTEIN RV3399; E=2e-08 pir:A70645; hypothetical protein Rv0726c - Mycobacterium; E=6e-08 COG: Rv0893c; COG3315 O-Methyltransferase involved in polyketide; E=3e-11 PFAM: PF02409; Domain of unknown function DUF142; E=7e-05; hypothetical protein 1733667 1791690 RB3371 Rhodopirellula baltica SH 1 hypothetical protein NP_865470.1 1732288 R 243090 CDS NP_865471.1 32472477 1791997 1733666..1734013 1 NC_005027.1 hypothetical protein 1734013 1791997 RB3372 Rhodopirellula baltica SH 1 hypothetical protein NP_865471.1 1733666 D 243090 CDS NP_865472.1 32472478 1792394 1734042..1740038 1 NC_005027.1 PMID: 9098081 best DB hits: BLAST: pir:T28655; receptor-like histidine kinase BpdS - Rhodococcus sp; E=1e-60 pir:T30898; receptor-like histidine kinase - Rhodococcus erythropolis; E=1e-60 pir:S75136; sensory transduction histidine kinase slr2104 -; E=9e-58 COG: VC1349_2; COG0642 Sensory transduction histidine kinases; E=1e-41 PFAM: PF00069; Protein kinase domain; E=8.1e-08 PF00515; TPR Domain; E=0.026 PF00512; His Kinase A (phosphoacceptor); E=1.4e-21; receptor-like histidine kinase BpdS 1740038 1792394 RB3373 Rhodopirellula baltica SH 1 receptor-like histidine kinase BpdS NP_865472.1 1734042 D 243090 CDS NP_865473.1 32472479 1797123 complement(1740063..1740350) 1 NC_005027.1 hypothetical protein 1740350 1797123 RB3374 Rhodopirellula baltica SH 1 hypothetical protein NP_865473.1 1740063 R 243090 CDS NP_865474.1 32472480 1793503 complement(1740070..1740198) 1 NC_005027.1 hypothetical protein 1740198 1793503 RB3375 Rhodopirellula baltica SH 1 hypothetical protein NP_865474.1 1740070 R 243090 CDS NP_865475.1 32472481 1795037 1740244..1742316 1 NC_005027.1 PMID: 11474104; signal peptide 1742316 1795037 RB3376 Rhodopirellula baltica SH 1 signal peptide NP_865475.1 1740244 D 243090 CDS NP_865476.1 32472482 1790586 complement(1742301..1745399) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAA91540.1; (AK001182) unnamed protein product [Homo sapiens]; E=8e-05 embl:CAB98267.1; (AJ276171) ASPIC [Homo sapiens]; E=2e-04 embl:CAB98268.1; (AJ276171) ASPIC [Homo sapiens] ----- embl:; E=2e-04 PFAM: PF00515; TPR Domain; E=1.9e-05; hypothetical protein 1745399 1790586 RB3379 Rhodopirellula baltica SH 1 hypothetical protein NP_865476.1 1742301 R 243090 CDS NP_865477.1 32472483 1792525 complement(1745389..1748433) 1 NC_005027.1 best DB hits: BLAST: pir:E69078; conserved hypothetical protein MTH1585 -; E=0.28; hypothetical protein 1748433 1792525 RB3382 Rhodopirellula baltica SH 1 hypothetical protein NP_865477.1 1745389 R 243090 CDS NP_865478.1 32472484 1796588 complement(1748459..1748695) 1 NC_005027.1 hypothetical protein 1748695 1796588 RB3387 Rhodopirellula baltica SH 1 hypothetical protein NP_865478.1 1748459 R 243090 CDS NP_865479.1 32472485 1794935 1748466..1751624 1 NC_005027.1 best DB hits: BLAST: ddbj:BAA91540.1; (AK001182) unnamed protein product [Homo sapiens]; E=4e-06 embl:CAB98267.1; (AJ276171) ASPIC [Homo sapiens]; E=9e-06 embl:CAB98268.1; (AJ276171) ASPIC [Homo sapiens] ----- embl:; E=9e-06 PFAM: PF02161; Progesterone receptor; E=0.75 PF01839; FG-GAP repeat; E=7.2e-05; hypothetical protein 1751624 1794935 RB3388 Rhodopirellula baltica SH 1 hypothetical protein NP_865479.1 1748466 D 243090 CDS NP_865480.1 32472486 1791267 complement(1751636..1751875) 1 NC_005027.1 hypothetical protein 1751875 1791267 RB3391 Rhodopirellula baltica SH 1 hypothetical protein NP_865480.1 1751636 R 243090 CDS NP_865481.1 32472487 1791295 1751865..1752047 1 NC_005027.1 hypothetical protein 1752047 1791295 RB3393 Rhodopirellula baltica SH 1 hypothetical protein NP_865481.1 1751865 D 243090 CDS NP_865482.1 32472488 1790546 1752044..1752154 1 NC_005027.1 hypothetical protein 1752154 1790546 RB3394 Rhodopirellula baltica SH 1 hypothetical protein NP_865482.1 1752044 D 243090 CDS NP_865483.1 32472489 1795515 1752151..1753347 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein 1753347 1795515 RB3395 Rhodopirellula baltica SH 1 hypothetical protein NP_865483.1 1752151 D 243090 CDS NP_865484.1 32472490 1790164 1753293..1753496 1 NC_005027.1 hypothetical protein 1753496 1790164 RB3398 Rhodopirellula baltica SH 1 hypothetical protein NP_865484.1 1753293 D 243090 CDS NP_865485.1 32472491 1792532 complement(1753453..1753650) 1 NC_005027.1 hypothetical protein 1753650 1792532 RB3399 Rhodopirellula baltica SH 1 hypothetical protein NP_865485.1 1753453 R 243090 CDS NP_865486.1 32472492 1791265 1753777..1755018 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 1755018 1791265 RB3400 Rhodopirellula baltica SH 1 signal peptide NP_865486.1 1753777 D 243090 CDS NP_865487.1 32472493 1795958 1755143..1755343 1 NC_005027.1 PMID: 9634230 best DB hits: BLAST: pir:G70688; probable lppV protein - Mycobacterium tuberculosis; E=0.019; hypothetical protein 1755343 1795958 RB3402 Rhodopirellula baltica SH 1 hypothetical protein NP_865487.1 1755143 D 243090 CDS NP_865488.1 32472494 1791692 complement(1755417..1756892) 1 NC_005027.1 PMID: 8020961 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=8e-37 pir:S07089; arylsulfatase (EC 3.1.6.1) - sea urchin (Lytechinus; E=3e-34 embl:CAA34667.1; (X16679) arylsulfatase [Hemicentrotus; E=3e-34 COG: aslA; COG3119 Arylsulfatase A and related enzymes; E=1e-16 PFAM: PF00884; Sulfatase; E=6.6e-42; N-acetylgalactosamine 6-sulfatase (GALNS) 1756892 1791692 RB3403 Rhodopirellula baltica SH 1 N-acetylgalactosamine 6-sulfatase (GALNS) NP_865488.1 1755417 R 243090 CDS NP_865489.1 32472495 1790965 complement(1756954..1757106) 1 NC_005027.1 hypothetical protein 1757106 1790965 RB3404 Rhodopirellula baltica SH 1 hypothetical protein NP_865489.1 1756954 R 243090 CDS NP_865490.1 32472496 1795708 complement(1757152..1759455) 1 NC_005027.1 PMID: 8843436 PMID: 1850729 best DB hits: BLAST: embl:CAB61926.1; (AL133278) hydrolase [Streptomyces; E=1e-109 embl:CAB95281.1; (AL359779) hydrolase [Streptomyces; E=4e-58 pir:A39405; beta-galactosidase (EC 3.2.1.23) - Clostridium; E=3e-19 COG: BH2723; COG3250 Beta-galactosidase/beta-glucuronidase; E=1e-18 PFAM: PF02837; Glycosyl hydrolases family 2,; E=1.3e-05 PF00703; Glycosyl hydrolases family 2,; E=7.2e-13; hydrolase 1759455 1795708 RB3405 Rhodopirellula baltica SH 1 hydrolase NP_865490.1 1757152 R 243090 CDS NP_865491.1 32472497 1792426 1759455..1759589 1 NC_005027.1 hypothetical protein 1759589 1792426 RB3406 Rhodopirellula baltica SH 1 hypothetical protein NP_865491.1 1759455 D 243090 CDS NP_865492.1 32472498 1792751 complement(1759666..1759935) 1 NC_005027.1 hypothetical protein 1759935 1792751 RB3407 Rhodopirellula baltica SH 1 hypothetical protein NP_865492.1 1759666 R 243090 CDS NP_865493.1 32472499 1795063 1759897..1760439 1 NC_005027.1 PMID: 11259647 best DB hits: PFAM: PF02627; Carboxymuconolactone decarbox; E=0.33; hypothetical protein 1760439 1795063 RB3408 Rhodopirellula baltica SH 1 hypothetical protein NP_865493.1 1759897 D 243090 CDS NP_865494.1 32472500 1793670 1760441..1761265 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:E83259; hypothetical protein PA3089 [imported] - Pseudomonas; E=8e-10 pir:D82119; hypothetical protein VC2094 [imported] - Vibrio cholerae; E=1e-05 PFAM: PF01110; Ciliary neurotrophic factor; E=0.62; hypothetical protein 1761265 1793670 RB3410 Rhodopirellula baltica SH 1 hypothetical protein NP_865494.1 1760441 D 243090 CDS NP_865495.1 32472501 1796657 complement(1761281..1762402) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:B75555; probable lipaseesterase - Deinococcus radiodurans; E=5e-28 pir:B70961; probable esterase - Mycobacterium tuberculosis (strain; E=2e-19 pir:H70731; probable esterase - Mycobacterium tuberculosis (strain; E=2e-18 COG: DR0133; COG0657 Acetyl esterase; E=5e-29 Rv2045c; COG2272 Carboxylesterase type B; E=7e-08 XF1253; COG0657 Acetyl esterase; E=3e-07 PFAM: PF00036; EF hand; E=0.0067 PF00135; Carboxylesterase; E=0.55 PF00326; Prolyl oligopeptidase; E=0.18; lipase/esterase 1762402 1796657 RB3413 Rhodopirellula baltica SH 1 lipase/esterase NP_865495.1 1761281 R 243090 CDS NP_865496.1 32472502 1792958 complement(1762399..1762518) 1 NC_005027.1 hypothetical protein 1762518 1792958 RB3416 Rhodopirellula baltica SH 1 hypothetical protein NP_865496.1 1762399 R 243090 CDS NP_865497.1 32472503 1793562 complement(1762528..1763589) 1 NC_005027.1 PMID: 10198006 best DB hits: BLAST: gb:AAD25394.1; (AF121904) pectate lyase [Azospirillum irakense]; E=7e-51 ddbj:BAA81752.1; (AB028877) pectate lyase E [Bacillus sp.; E=3e-49 gb:AAG29353.1; AF279264_1 (AF279264) pectate lyase [Pseudomonas; E=2e-48; pectate lyase 1763589 1793562 RB3417 Rhodopirellula baltica SH 1 pectate lyase NP_865497.1 1762528 R 243090 CDS NP_865498.1 32472504 1793108 complement(1763596..1764237) 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: pir:C70555; hypothetical protein Rv1154c - Mycobacterium; E=0.003; hypothetical protein 1764237 1793108 RB3418 Rhodopirellula baltica SH 1 hypothetical protein NP_865498.1 1763596 R 243090 CDS NP_865499.1 32472505 1792977 complement(1764206..1766641) 1 NC_005027.1 PMID: 11722934 best DB hits: BLAST: swissprot:P13734; AGAR_ALTAT BETA-AGARASE PRECURSOR ----- pir:; E=1e-10; beta-agarase 1766641 agrA 1792977 agrA Rhodopirellula baltica SH 1 beta-agarase NP_865499.1 1764206 R 243090 CDS NP_865500.1 32472506 1793291 1766641..1766769 1 NC_005027.1 hypothetical protein 1766769 1793291 RB3422 Rhodopirellula baltica SH 1 hypothetical protein NP_865500.1 1766641 D 243090 CDS NP_865501.1 32472507 1793745 complement(1766791..1768200) 1 NC_005027.1 PMID: 6345153 PMID: 6821375 PMID: 2121129 best DB hits: BLAST: pir:C82079; pyruvate dehydrogenase, E2 component, dihydrolipoamide; E=4e-55 pir:H75540; pyruvate dehydrogenase complex, dihydrolipoamide; E=4e-55 gb:AAK02978.1; (AE006128) AceF [Pasteurella multocida]; E=6e-54 COG: VC2413; COG0508 Dihydrolipoamide acyltransferases; E=3e-56 PFAM: PF00364; Biotin-requiring enzyme; E=2.1e-20 PF02817; e3 binding domain; E=8.5e-14 PF00198; 2-oxo acid dehydrogenases acylt; E=8.5e-100; pyruvate dehydrogenase, E2 component, dihydrolipoamide acetyltransferase 1768200 aceF 1793745 aceF Rhodopirellula baltica SH 1 pyruvate dehydrogenase, E2 component, dihydrolipoamide acetyltransferase NP_865501.1 1766791 R 243090 CDS NP_865502.1 32472508 1795563 complement(1768339..1771071) 1 NC_005027.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 1771071 aceE 1795563 aceE Rhodopirellula baltica SH 1 pyruvate dehydrogenase subunit E1 NP_865502.1 1768339 R 243090 CDS NP_865503.1 32472509 1792006 1771404..1771622 1 NC_005027.1 hypothetical protein 1771622 1792006 RB3426 Rhodopirellula baltica SH 1 hypothetical protein NP_865503.1 1771404 D 243090 CDS NP_865504.1 32472510 1793506 complement(1771559..1772155) 1 NC_005027.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 1772155 dcd 1793506 dcd Rhodopirellula baltica SH 1 deoxycytidine triphosphate deaminase NP_865504.1 1771559 R 243090 CDS NP_865505.1 32472511 1793622 complement(1772192..1772629) 1 NC_005027.1 hypothetical protein 1772629 1793622 RB3429 Rhodopirellula baltica SH 1 hypothetical protein NP_865505.1 1772192 R 243090 CDS NP_865506.1 32472512 1794050 1772646..1773392 1 NC_005027.1 PMID: 11677609 best DB hits: BLAST: gb:AAC61875.1; (M59935) unknown [Aspergillus nidulans]; E=0.062 pir:T41414; probable receptor-associated protein - fission yeast; E=0.23; hypothetical protein 1773392 1794050 RB3430 Rhodopirellula baltica SH 1 hypothetical protein NP_865506.1 1772646 D 243090 CDS NP_865507.1 32472513 1797023 1773397..1774179 1 NC_005027.1 PMID: 7961402 PMID: 8969504 PMID: 9384377 best DB hits: BLAST: pir:S76379; hypothetical protein - Synechocystis sp. (strain PCC; E=2e-05 swissprot:P37945; LON1_BACSU ATP-DEPENDENT PROTEASE LA 1 -----; E=8e-05 swissprot:O66605; LON_AQUAE ATP-DEPENDENT PROTEASE LA -----; E=1e-04 COG: sll0195; COG2802 Uncharacterized protein, similar to the N-terminal; E=2e-06 BS_lonA; COG0466 ATP-dependent Lon protease, bacterial type; E=8e-06 PFAM: PF02190; ATP-dependent protease La (LON); E=8.3e-08; ATP-dependent protease La 1 1774179 lon 1797023 lon Rhodopirellula baltica SH 1 ATP-dependent protease La 1 NP_865507.1 1773397 D 243090 CDS NP_865508.1 32472514 1793691 1774499..1774966 1 NC_005027.1 PMID: 9278503 best DB hits: BLAST: swissprot:P75707; YBAZ_ECOLI HYPOTHETICAL 14.4 KD PROTEIN IN; E=1e-04 gb:AAG54804.1; AE005224_9 (AE005224) orf, hypothetical protein; E=2e-04 embl:CAC16996.1; (AL450350) conserved hypothetical protein; E=3e-04 COG: ybaZ; COG0350 Methylated DNA-protein cysteine methyltransferase; E=1e-05 PFAM: PF01035; 6-O-methylguanine DNA methyltr; E=8.4e-05; methylated-DNA-protein-cysteine methyltransferase 1774966 1793691 RB3433 Rhodopirellula baltica SH 1 methylated-DNA-protein-cysteine methyltransferase NP_865508.1 1774499 D 243090 CDS NP_865509.1 32472515 1793063 complement(1775030..1776091) 1 NC_005027.1 PMID: 10086841 best DB hits: BLAST: ddbj:BAB05303.1; (AP001512) BH1584~unknown conserved protein in; E=1e-18 pir:T34720; probable lipoprotein - Streptomyces coelicolor -----; E=2e-05 pir:T27110; hypothetical protein Y52B11B.2 - Caenorhabditis elegans; E=6e-04; hypothetical protein 1776091 1793063 RB3435 Rhodopirellula baltica SH 1 hypothetical protein NP_865509.1 1775030 R 243090 CDS NP_865510.1 32472516 1796947 1776194..1776367 1 NC_005027.1 hypothetical protein 1776367 1796947 RB3436 Rhodopirellula baltica SH 1 hypothetical protein NP_865510.1 1776194 D 243090 CDS NP_865511.1 32472517 1793797 complement(1776314..1777639) 1 NC_005027.1 best DB hits: PFAM: PF01034; Syndecan domain; E=0.87; signal peptide 1777639 1793797 RB3437 Rhodopirellula baltica SH 1 signal peptide NP_865511.1 1776314 R 243090 CDS NP_865512.1 32472518 1795527 1777782..1779092 1 NC_005027.1 hypothetical protein 1779092 1795527 RB3440 Rhodopirellula baltica SH 1 hypothetical protein NP_865512.1 1777782 D 243090 CDS NP_865513.1 32472519 1791704 1779073..1779219 1 NC_005027.1 hypothetical protein 1779219 1791704 RB3441 Rhodopirellula baltica SH 1 hypothetical protein NP_865513.1 1779073 D 243090 CDS NP_865514.1 32472520 1793566 complement(1779212..1780636) 1 NC_005027.1 PMID: 10086841 best DB hits: BLAST: ddbj:BAB05939.1; (AP001514) dehydrogenase [Bacillus halodurans]; E=1e-08 pir:B72359; lipopolysaccharide biosynthesis protein BplA -; E=2e-07 pir:D71201; hypothetical protein PH1881 - Pyrococcus horikoshii; E=5e-07 COG: BH2220; COG0673 Predicted dehydrogenases and related proteins; E=1e-09 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=1.2e-14; dehydrogenase 1780636 1793566 RB3442 Rhodopirellula baltica SH 1 dehydrogenase NP_865514.1 1779212 R 243090 CDS NP_865515.1 32472521 1796996 complement(1780781..1782316) 1 NC_005027.1 PMID: 11859360 best DB hits: BLAST: swissprot:P87051; YDJ3_SCHPO PROBABLE PEPTIDYL-PROLYL CIS-TRANS; E=5e-16 pir:H82708; peptidyl-prolyl cis-trans isomerase XF1212 [imported] -; E=9e-16 pir:H69044; peptidylprolyl isomerase (EC 5.2.1.8) MTH1338; E=2e-14 COG: XF1212; COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) -; E=9e-17 PFAM: PF00160; Cyclophilin type peptidyl-proly; E=1.9e-05; peptidyl-prolyl cis-trans isomerase cyp2 1782316 1796996 RB3446 Rhodopirellula baltica SH 1 peptidyl-prolyl cis-trans isomerase cyp2 NP_865515.1 1780781 R 243090 CDS NP_865516.1 32472522 1790460 complement(1782317..1782475) 1 NC_005027.1 hypothetical protein 1782475 1790460 RB3449 Rhodopirellula baltica SH 1 hypothetical protein NP_865516.1 1782317 R 243090 CDS NP_865517.1 32472523 1795757 complement(1782358..1782543) 1 NC_005027.1 hypothetical protein 1782543 1795757 RB3450 Rhodopirellula baltica SH 1 hypothetical protein NP_865517.1 1782358 R 243090 CDS NP_865518.1 32472524 1789910 1782522..1783022 1 NC_005027.1 PMID: 10694574 best DB hits: BLAST: swissprot:P44815; ISPF_HAEIN 2C-METHYL-D-ERYTHRITOL; E=6e-36 gb:AAF65155.1; AF250236_1 (AF250236) 2C-methyl-D-erythritol; E=3e-34 gb:AAG52445.1; AC010852_2 (AC010852) unknown protein; 376-1789; E=5e-34 COG: HI0671; COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; E=6e-37 BS_yacN; COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate; E=4e-31 VC0529; COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; E=1e-30 PFAM: PF02542; YgbB family; E=9.6e-63; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1783022 ispF 1789910 ispF Rhodopirellula baltica SH 1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase NP_865518.1 1782522 D 243090 CDS NP_865519.1 32472525 1795294 complement(1783051..1785432) 1 NC_005027.1 PMID: 8501040 best DB hits: BLAST: swissprot:Q03475; LAFB_VIBPA FLAGELLAR HOOK-ASSOCIATED PROTEIN 2; E=4e-12 pir:H72292; hypothetical protein TM1123 - Thermotoga maritima; E=6e-11 gb:AAF19182.1; AF198617_6 (AF198617) FlaH [Aeromonas caviae]; E=2e-09 COG: TM1123; COG1345 Flagellar capping protein; E=6e-12 PFAM: PF02465; Flagellar hook-associated protein 2; E=0.031; lateral flagellar hook-associated protein 2 1785432 fliD 1795294 fliD Rhodopirellula baltica SH 1 lateral flagellar hook-associated protein 2 NP_865519.1 1783051 R 243090 CDS NP_865520.1 32472526 1797087 1785458..1785631 1 NC_005027.1 hypothetical protein 1785631 1797087 RB3455 Rhodopirellula baltica SH 1 hypothetical protein NP_865520.1 1785458 D 243090 CDS NP_865521.1 32472527 1792196 complement(1785628..1785972) 1 NC_005027.1 hypothetical protein 1785972 1792196 RB3456 Rhodopirellula baltica SH 1 hypothetical protein NP_865521.1 1785628 R 243090 CDS NP_865522.1 32472528 1793782 complement(1786015..1786476) 1 NC_005027.1 signal peptide 1786476 1793782 RB3459 Rhodopirellula baltica SH 1 signal peptide NP_865522.1 1786015 R 243090 CDS NP_865523.1 32472529 1791249 complement(1786494..1787042) 1 NC_005027.1 signal peptide 1787042 1791249 RB3462 Rhodopirellula baltica SH 1 signal peptide NP_865523.1 1786494 R 243090 CDS NP_865524.1 32472530 1790268 1786989..1787240 1 NC_005027.1 hypothetical protein 1787240 1790268 RB3464 Rhodopirellula baltica SH 1 hypothetical protein NP_865524.1 1786989 D 243090 CDS NP_865525.1 32472531 1795138 1787376..1789853 1 NC_005027.1 PMID: 7642123 best DB hits: BLAST: swissprot:P41513; GYRA_ERWCA DNA GYRASE SUBUNIT A ----- pir:; E=1e-105 gb:AAB95117.1; (U56906) DNA gyrase [Serratia marcescens]; E=1e-105 swissprot:P48372; GYRA_PSEAE DNA GYRASE SUBUNIT A ----- pir:; E=1e-104 COG: PA3168; COG0188 DNA gyrase (topoisomerase II) A subunit; E=1e-105 PFAM: PF00521; DNA gyrase/topoisomerase IV, su; E=2.9e-225; DNA gyrase subunit A 1789853 gyrA 1795138 gyrA Rhodopirellula baltica SH 1 DNA gyrase subunit A NP_865525.1 1787376 D 243090 CDS NP_865526.1 32472532 1790114 1789942..1791855 1 NC_005027.1 PMID: 8863738 best DB hits: BLAST: pir:JC4960; DNA topoisomerase (ATP-hydrolyzing) (EC 5.99.1.3) B -; E=1e-140 swissprot:P77993; GYRB_THEMA DNA GYRASE SUBUNIT B (TOPOISOMERASE; E=1e-140 gb:AAG21374.1; AF288224_1 (AF288224) DNA Gyrase B subunit; E=1e-136 COG: TM0833; COG0187 DNA gyrase (topoisomerase II) B subunit; E=1e-141 PFAM: PF02518; Histidine kinase-, DNA gyrase B; E=2.1e-26 PF00204; DNA topoisomerase II (N-termina; E=1.3e-54 PF01751; Toprim domain; E=2.9e-10; DNA gyrase subunit B 1791855 gyrB 1790114 gyrB Rhodopirellula baltica SH 1 DNA gyrase subunit B NP_865526.1 1789942 D 243090 CDS NP_865527.1 32472533 1795099 complement(1791998..1792615) 1 NC_005027.1 hypothetical protein 1792615 1795099 RB3467 Rhodopirellula baltica SH 1 hypothetical protein NP_865527.1 1791998 R 243090 CDS NP_865528.1 32472534 1791172 1792382..1793407 1 NC_005027.1 best DB hits: BLAST: gb:AAC09305.1; (AF047044) transposase [Nostoc sp. PCC; E=2e-41 pir:A32816; hypothetical protein, 33K - Pseudomonas atlantica; E=7e-35 pir:B81886; probable transposase NMA1185 [imported] - Neisseria; E=1e-30 PFAM: PF01548; Transposase; E=2.2e-05 PF02371; Transposase IS116/IS110/IS902; E=1.3e-25; transposase 1793407 1791172 RB3468 Rhodopirellula baltica SH 1 transposase NP_865528.1 1792382 D 243090 CDS NP_865529.1 32472535 1794136 complement(1793823..1794386) 1 NC_005027.1 PMID: 3026317 PMID: 3001025 PMID: 9278503 best DB hits: BLAST: swissprot:P08329; AROL_ECOLI SHIKIMATE KINASE II (SKII) -----; E=2e-22 swissprot:P34003; AROK_PSEAE SHIKIMATE KINASE (SK) ----- pir:; E=4e-20 swissprot:P72796; AROK_SYNY3 SHIKIMATE KINASE (SK) ----- pir:; E=4e-20 COG: aroL; COG0703 Shikimate kinase; E=2e-23 PFAM: PF01583; Adenylylsulfate kinase; E=0.014 PF00005; ABC transporter; E=0.059 PF00910; RNA helicase; E=0.016; shikimate kinase II 1794386 1794136 RB3471 Rhodopirellula baltica SH 1 shikimate kinase II NP_865529.1 1793823 R 243090 CDS NP_865530.1 32472536 1794877 1794413..1795744 1 NC_005027.1 hypothetical protein 1795744 1794877 RB3473 Rhodopirellula baltica SH 1 hypothetical protein NP_865530.1 1794413 D 243090 CDS NP_865531.1 32472537 1794441 1795880..1796875 1 NC_005027.1 PMID: 8688087 best DB hits: BLAST: swissprot:Q58408; YA02_METJA HYPOTHETICAL PROTEIN MJ1002 -----; E=4e-23 pir:F75071; hypothetical protein PAB1730 - Pyrococcus abyssi (strain; E=3e-22 pir:B71094; hypothetical protein PH1015 - Pyrococcus horikoshii; E=2e-21 COG: MJ1002; COG1624 Uncharacterized ACR; E=4e-24 PFAM: PF02457; Domain of unknown function DUF147; E=1.2e-26; hypothetical protein 1796875 1794441 RB3476 Rhodopirellula baltica SH 1 hypothetical protein NP_865531.1 1795880 D 243090 CDS NP_865532.1 32472538 1795190 complement(1797074..1797871) 1 NC_005027.1 PMID: 3027045 PMID: 8471602 PMID: 10387007 PMID: 10555963 PMID: 8202364 best DB hits: BLAST: swissprot:P53579; AMP1_SYNY3 METHIONINE AMINOPEPTIDASE A; E=3e-57 swissprot:P07906; AMPM_ECOLI METHIONINE AMINOPEPTIDASE (MAP); E=1e-55 swissprot:P10882; AMPM_SALTY METHIONINE AMINOPEPTIDASE (MAP); E=2e-55 COG: slr0918; COG0024 Methionine aminopeptidase; E=3e-58 PFAM: PF00557; metallopeptidase M24; E=9.9e-60; methionine aminopeptidase 1797871 map 1795190 map Rhodopirellula baltica SH 1 methionine aminopeptidase NP_865532.1 1797074 R 243090 CDS NP_865533.1 32472539 1791838 1797880..1801143 1 NC_005027.1 PMID: 11254562 best DB hits: PFAM: PF00263; Bacterial type II and III secretion; E=0.021; general secretory pathway protein 1801143 1791838 RB3479 Rhodopirellula baltica SH 1 general secretory pathway protein NP_865533.1 1797880 D 243090 CDS NP_865534.1 32472540 1795273 1801140..1802831 1 NC_005027.1 PMID: 1944223 best DB hits: BLAST: pir:D82672; general secretory pathway protein E XF1517 [imported] -; E=1e-114 swissprot:P31742; GSPE_XANCP GENERAL SECRETION PATHWAY PROTEIN E; E=1e-110 pir:T12056; xpsE protein - Xanthomonas campestris pv. campestris; E=1e-110 COG: XF1517; COG2804 Predicted ATPases involved in pili biogenesis, PilB; E=1e-115 PFAM: PF00004; ATPase associated with variou; E=0.13 PF00448; SRP54-type protein, GTPase domain; E=0.038 PF00437; Bacterial type II secretion system p; E=8.8e-156; general secretion pathway protein E 1802831 1795273 RB3482 Rhodopirellula baltica SH 1 general secretion pathway protein E NP_865534.1 1801140 D 243090 CDS NP_865535.1 32472541 1794663 1802913..1804127 1 NC_005027.1 PMID: 1971619 PMID: 10984043 best DB hits: BLAST: pir:A75344; pilin biogenesis protein - Deinococcus radiodurans; E=4e-52 swissprot:P22609; PILC_PSEAE FIMBRIAL ASSEMBLY PROTEIN PILC; E=3e-48 pir:F82546; fimbrial assembly protein XF2538 [imported] - Xylella; E=3e-47 COG: DR1863; COG1459 General secretory pathway protein F; E=4e-53 PFAM: PF01961; Integral membrane protein DUF110; E=0.0065 PF00482; Bacterial type II secretion system p; E=5.1e-83; type 4 fimbrial assembly protein pilC 1804127 1794663 RB3484 Rhodopirellula baltica SH 1 type 4 fimbrial assembly protein pilC NP_865535.1 1802913 D 243090 CDS NP_865536.1 32472542 1792570 complement(1804092..1804241) 1 NC_005027.1 hypothetical protein 1804241 1792570 RB3485 Rhodopirellula baltica SH 1 hypothetical protein NP_865536.1 1804092 R 243090 CDS NP_865537.1 32472543 1793216 complement(1804252..1805121) 1 NC_005027.1 PMID: 2830169 PMID: 2684786 PMID: 1445207 PMID: 9108148 best DB hits: BLAST: gb:AAC24510.1; (AF049243) regulatory protein [Mesorhizobium loti]; E=2e-25 swissprot:P10411; MELR_ECOLI MELIBIOSE OPERON REGULATORY PROTEIN; E=5e-23 ddbj:BAB20427.1; (AB053204) melibiose operon regulatory protein; E=7e-23 COG: melR; COG2207 AraC-type DNA-binding domain-containing proteins; E=5e-24 BS_adaA; COG2169 Adenosine deaminase; E=1e-07 VC1260; COG2207 AraC-type DNA-binding domain-containing proteins; E=1e-07 PFAM: PF00165; Bacterial regulatory helix-turn-heli; E=4.3e-24; melibiose operon regulatory protein 1805121 melR 1793216 melR Rhodopirellula baltica SH 1 melibiose operon regulatory protein NP_865537.1 1804252 R 243090 CDS NP_865538.1 32472544 1791789 1805258..1806502 1 NC_005027.1 PMID: 1460002 PMID: 9384377 best DB hits: BLAST: swissprot:Q06004; DHSO_BACSU SORBITOL DEHYDROGENASE (L-IDITOL; E=1e-32 pir:G72376; alcohol dehydrogenase, zinc-containing - Thermotoga; E=2e-27 pir:H71110; probable dehydrogenase - Pyrococcus horikoshii -----; E=9e-25 COG: BS_gutB; COG1063 Threonine dehydrogenase and related Zn-dependent; E=1e-33 PFAM: PF00107; Zinc-binding dehydrogenases; E=2.2e-50; sorbitol dehydrogenase 1806502 1791789 RB3488 Rhodopirellula baltica SH 1 sorbitol dehydrogenase NP_865538.1 1805258 D 243090 CDS NP_865539.1 32472545 1791298 complement(1806450..1806644) 1 NC_005027.1 hypothetical protein 1806644 1791298 RB3490 Rhodopirellula baltica SH 1 hypothetical protein NP_865539.1 1806450 R 243090 CDS NP_865540.1 32472546 1790046 1806665..1807072 1 NC_005027.1 cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source; D-ribose pyranase 1807072 rbsD 1790046 rbsD Rhodopirellula baltica SH 1 D-ribose pyranase NP_865540.1 1806665 D 243090 CDS NP_865541.1 32472547 1796937 1807097..1808104 1 NC_005027.1 PMID: 6313683 PMID: 3011793 PMID: 1583688 PMID: 7982928 best DB hits: BLAST: pir:C72311; ribose ABC transporter, periplasmic ribose-binding; E=7e-89 pir:C82497; ribose ABC transporter, periplasmic D-ribose-binding; E=1e-48 pir:JGEBRT; D-ribose-binding protein - Salmonella typhimurium; E=1e-47 COG: TM0958; COG1879 Periplasmic sugar-binding proteins; E=6e-90 BH3727; COG1609 Transcriptional regulators; E=5e-11 yphF; COG1879 Periplasmic sugar-binding proteins; E=1e-10 PFAM: PF00532; Periplasmic binding proteins; E=0.0014 PF00534; Glycosyl transferases group 1; E=0.11 PF00532; Periplasmic binding proteins; E=0.21; ribose ABC transporter, periplasmic ribose-binding protein rbsB 1808104 rbsB 1796937 rbsB Rhodopirellula baltica SH 1 ribose ABC transporter, periplasmic ribose-binding protein rbsB NP_865541.1 1807097 D 243090 CDS NP_865542.1 32472548 1795898 1808101..1808757 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: pir:F72314; hypothetical protein TM0957 - Thermotoga maritima; E=2e-09 gb:AAD37311.1; AF135170_2 (AF135170) unknown [Yersinia pestis]; E=0.22; hypothetical protein 1808757 1795898 RB3495 Rhodopirellula baltica SH 1 hypothetical protein NP_865542.1 1808101 D 243090 CDS NP_865543.1 32472549 1797111 1808754..1810289 1 NC_005027.1 PMID: 3011793 PMID: 3086314 PMID: 7686882 best DB hits: BLAST: pir:E72314; ribose ABC transporter ATP-binding protein - Thermotoga; E=1e-132 pir:A82497; ribose ABC transporter ATP-binding protein VCA0128; E=1e-110 swissprot:P04983; RBSA_ECOLI RIBOSE TRANSPORT ATP-BINDING PROTEIN; E=1e-109 COG: TM0956; COG1129 ABC-type sugar (aldose) transport system, ATPase; E=1e-133 PFAM: PF00005; ABC transporter; E=3.5e-55; ribose ABC transporter ATP-binding protein rbsA 1810289 rbsA 1797111 rbsA Rhodopirellula baltica SH 1 ribose ABC transporter ATP-binding protein rbsA NP_865543.1 1808754 D 243090 CDS NP_865544.1 32472550 1793326 1810283..1811254 1 NC_005027.1 PMID: 7921236 PMID: 9384377 best DB hits: BLAST: pir:D72314; ribose ABC transporter, permease - Thermotoga; E=3e-57 pir:B69690; ribose ABC transporter (permease) rbsC - Bacillus; E=6e-41 pir:B82497; ribose ABC transporter, permease VCA0129; E=2e-40 COG: TM0955; COG1172 Ribose/xylose/arabinose/galactoside ABC-type; E=3e-58 rbsC; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport; E=6e-35 TM0112; COG1172 Ribose/xylose/arabinose/galactoside ABC-type; E=9e-30 PFAM: PF02653; Branched-chain amino acid transp; E=3.8e-10; ribose transport system permease rbsC 1811254 rbsC 1793326 rbsC Rhodopirellula baltica SH 1 ribose transport system permease rbsC NP_865544.1 1810283 D 243090 CDS NP_865545.1 32472551 1794245 1811256..1812200 1 NC_005027.1 PMID: 3011794 best DB hits: BLAST: embl:CAC12877.1; (AJ404857) ribokinase [Homo sapiens]; E=1e-51 pir:B83403; ribokinase PA1950 [imported] - Pseudomonas aeruginosa; E=2e-50 swissprot:P44331; RBSK_HAEIN RIBOKINASE ----- pir: B64073; E=2e-48 COG: PA1950; COG0524 Sugar kinases, ribokinase; E=2e-51 PFAM: PF00294; pfkB family carbohydrate kinase; E=3.3e-74; ribokinase 1812200 rbsK 1794245 rbsK Rhodopirellula baltica SH 1 ribokinase NP_865545.1 1811256 D 243090 CDS NP_865546.1 32472552 1792012 1812197..1813639 1 NC_005027.1 PMID: 11259647 best DB hits: PFAM: PF01819; Levivirus coat protein; E=0.45 PF00801; PKD domain; E=0.16; signal peptide 1813639 1792012 RB3500 Rhodopirellula baltica SH 1 signal peptide NP_865546.1 1812197 D 243090 CDS NP_865547.1 32472553 1791830 1813718..1815190 1 NC_005027.1 PMID: 11259647; signal peptide 1815190 1791830 RB3501 Rhodopirellula baltica SH 1 signal peptide NP_865547.1 1813718 D 243090 CDS NP_865548.1 32472554 1794310 1815121..1816584 1 NC_005027.1 PMID: 11259647; hypothetical protein 1816584 1794310 RB3504 Rhodopirellula baltica SH 1 hypothetical protein NP_865548.1 1815121 D 243090 CDS NP_865549.1 32472555 1796885 1816597..1816704 1 NC_005027.1 hypothetical protein 1816704 1796885 RB3505 Rhodopirellula baltica SH 1 hypothetical protein NP_865549.1 1816597 D 243090 CDS NP_865550.1 32472556 1796750 complement(1816685..1816825) 1 NC_005027.1 hypothetical protein 1816825 1796750 RB3506 Rhodopirellula baltica SH 1 hypothetical protein NP_865550.1 1816685 R 243090 CDS NP_865551.1 32472557 1791136 complement(1816898..1817077) 1 NC_005027.1 hypothetical protein 1817077 1791136 RB3507 Rhodopirellula baltica SH 1 hypothetical protein NP_865551.1 1816898 R 243090 CDS NP_865552.1 32472558 1790955 1817046..1817927 1 NC_005027.1 best DB hits: BLAST: swissprot:P33119; GALE_CORDI UDP-GLUCOSE 4-EPIMERASE; E=2e-07 pir:A70392; UDP-glucose-4-epimerase - Aquifex aeolicus ----- gb:; E=2e-07 pir:C69149; conserved hypothetical protein MTH380 - Methanobacterium; E=2e-07 COG: VCA0774; COG1087 UDP-glucose 4-epimerase; E=7e-06 Cj1319; COG0451 Nucleoside-diphosphate-sugar epimerases; E=4e-06 MTH631; COG1087 UDP-glucose 4-epimerase; E=1e-06 PFAM: PF01370; NAD dependent epimerase/dehydratase; E=0.56 PF01073; 3-beta hydroxysteroid dehydrogenase; E=0.63 PF01370; NAD dependent epimerase/dehydratase; E=2.9e-05; UDP-glucose 4-epimerase GalE2 1817927 galE2 1790955 galE2 Rhodopirellula baltica SH 1 UDP-glucose 4-epimerase GalE2 NP_865552.1 1817046 D 243090 CDS NP_865553.1 32472559 1796035 1818015..1819025 1 NC_005027.1 best DB hits: BLAST: pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=1e-06 embl:CAB94634.1; (AL359215) secreted glycosyl hydrolase.; E=7e-04 pir:T35029; hypothetical protein SC4C6.21c - Streptomyces coelicolor; E=0.13; hypothetical protein 1819025 1796035 RB3509 Rhodopirellula baltica SH 1 hypothetical protein NP_865553.1 1818015 D 243090 CDS NP_865554.1 32472560 1794951 1819062..1820495 1 NC_005027.1 PMID: 11259647 best DB hits: BLAST: pir:G72720; probable oligopeptide-binding protein oppA APE0304 -; E=0.73 PFAM: PF00028; Cadherin domain; E=0.14; signal peptide 1820495 1794951 RB3513 Rhodopirellula baltica SH 1 signal peptide NP_865554.1 1819062 D 243090 CDS NP_865555.1 32472561 1795168 1820492..1821781 1 NC_005027.1 PMID: 11259647; signal peptide 1821781 1795168 RB3514 Rhodopirellula baltica SH 1 signal peptide NP_865555.1 1820492 D 243090 CDS NP_865556.1 32472562 1790860 1821890..1823275 1 NC_005027.1 hypothetical protein 1823275 1790860 RB3517 Rhodopirellula baltica SH 1 hypothetical protein NP_865556.1 1821890 D 243090 CDS NP_865557.1 32472563 1790813 1823417..1823743 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB71255.1; (AL138598) ArsR-family transcriptional; E=2e-06 pir:S74901; arsenical resistance operon repressor - Synechocystis; E=9e-05 pir:D64465; hypothetical protein MJ1325 - Methanococcus jannaschii; E=1e-04 COG: sll1957; COG0640 Predicted transcriptional regulators; E=9e-06 PFAM: PF01022; Bacterial regulatory protein, arsR f; E=9.4e-13; transcriptional regulator ArsR 1823743 arsR 1790813 arsR Rhodopirellula baltica SH 1 transcriptional regulator ArsR NP_865557.1 1823417 D 243090 CDS NP_865558.1 32472564 1791529 1823744..1825345 1 NC_005027.1 signal peptide 1825345 1791529 RB3522 Rhodopirellula baltica SH 1 signal peptide NP_865558.1 1823744 D 243090 CDS NP_865559.1 32472565 1794765 complement(1825364..1827214) 1 NC_005027.1 PMID: 7751272 best DB hits: BLAST: pir:C83558; hypothetical protein PA0692 [imported] - Pseudomonas; E=1e-15 swissprot:P45356; HXB2_HAEIN HEMEHEMOPEXIN UTILIZATION PROTEIN B; E=2e-05 swissprot:P44601; HXB1_HAEIN HEMEHEMOPEXIN UTILIZATION PROTEIN B; E=3e-05 COG: PA0692; COG2831 Hemolysin activation/secretion protein; E=1e-16; heme/hemopexin utilization protein huxB 1827214 1794765 RB3524 Rhodopirellula baltica SH 1 heme/hemopexin utilization protein huxB NP_865559.1 1825364 R 243090 CDS NP_865560.1 32472566 1790537 complement(1827251..1827376) 1 NC_005027.1 hypothetical protein 1827376 1790537 RB3525 Rhodopirellula baltica SH 1 hypothetical protein NP_865560.1 1827251 R 243090 CDS NP_865561.1 32472567 1796902 1827366..1827521 1 NC_005027.1 hypothetical protein 1827521 1796902 RB3526 Rhodopirellula baltica SH 1 hypothetical protein NP_865561.1 1827366 D 243090 CDS NP_865562.1 32472568 1796200 1827580..1840344 1 NC_005027.1 PMID: 7815944 best DB hits: BLAST: pir:F83068; hypothetical protein PA4625 [imported] - Pseudomonas; E=5e-25 gb:AAA20524.1; (U08875) adhesin [Haemophilus influenzae]; E=1e-19 pir:B43855; high-molecular-weight surface-exposed protein -; E=2e-19; heme/hemopexin utilization protein huxA 1840344 1796200 RB3527 Rhodopirellula baltica SH 1 heme/hemopexin utilization protein huxA NP_865562.1 1827580 D 243090 CDS NP_865563.1 32472569 1792779 1840557..1841543 1 NC_005027.1 PMID: 11743194 best DB hits: BLAST: pir:S74570; alkaline phosphatase (EC 3.1.3.1) phoA - Synechocystis; E=0.002 pir:T05561; hypothetical protein F22K18.70 - Arabidopsis thaliana; E=0.24 embl:CAB08432.1; (Z95151) Icc [Mycobacterium leprae]; E=0.54 COG: sll0222; COG1409 Predicted phosphohydrolases; E=2e-04 PFAM: PF01425; Amidase; E=0.24; alkaline phosphatase 1841543 1792779 RB3532 Rhodopirellula baltica SH 1 alkaline phosphatase NP_865563.1 1840557 D 243090 CDS NP_865564.1 32472570 1796827 complement(1841586..1844699) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAA91540.1; (AK001182) unnamed protein product [Homo sapiens]; E=1e-05 embl:CAB98267.1; (AJ276171) ASPIC [Homo sapiens]; E=4e-05 embl:CAB98268.1; (AJ276171) ASPIC [Homo sapiens] ----- embl:; E=4e-05; hypothetical protein 1844699 1796827 RB3534 Rhodopirellula baltica SH 1 hypothetical protein NP_865564.1 1841586 R 243090 CDS NP_865565.1 32472571 1793833 complement(1844714..1844914) 1 NC_005027.1 hypothetical protein 1844914 1793833 RB3539 Rhodopirellula baltica SH 1 hypothetical protein NP_865565.1 1844714 R 243090 CDS NP_865566.1 32472572 1794305 complement(1844996..1846228) 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 1846228 1794305 RB3542 Rhodopirellula baltica SH 1 signal peptide NP_865566.1 1844996 R 243090 CDS NP_865567.1 32472573 1794782 1846255..1846428 1 NC_005027.1 hypothetical protein 1846428 1794782 RB3545 Rhodopirellula baltica SH 1 hypothetical protein NP_865567.1 1846255 D 243090 CDS NP_865568.1 32472574 1790684 complement(1846454..1846567) 1 NC_005027.1 hypothetical protein 1846567 1790684 RB3546 Rhodopirellula baltica SH 1 hypothetical protein NP_865568.1 1846454 R 243090 CDS NP_865569.1 32472575 1793513 complement(1846534..1846734) 1 NC_005027.1 hypothetical protein 1846734 1793513 RB3547 Rhodopirellula baltica SH 1 hypothetical protein NP_865569.1 1846534 R 243090 CDS NP_865570.1 32472576 1793914 complement(1846834..1847013) 1 NC_005027.1 hypothetical protein 1847013 1793914 RB3548 Rhodopirellula baltica SH 1 hypothetical protein NP_865570.1 1846834 R 243090 CDS NP_865571.1 32472577 1791855 1847124..1848020 1 NC_005027.1 PMID: 9573174 best DB hits: BLAST: ddbj:BAB05677.1; (AP001513) BH1958~unknown conserved protein; E=1e-07 swissprot:O33813; LACR_STAXY LACTOSE OPERON TRANSCRIPTION; E=4e-07 ddbj:BAB07561.1; (AP001520) two-component response regulator; E=6e-07 COG: BH1958; COG2207 AraC-type DNA-binding domain-containing proteins; E=1e-08 BH0394; COG2169 Adenosine deaminase; E=2e-06 PA2337; COG2207 AraC-type DNA-binding domain-containing proteins; E=3e-06 PFAM: PF00165; Bacterial regulatory helix-turn-heli; E=3.7e-20; lactose operon transcription activator 1848020 1791855 RB3549 Rhodopirellula baltica SH 1 lactose operon transcription activator NP_865571.1 1847124 D 243090 CDS NP_865572.1 32472578 1795363 complement(1848038..1848991) 1 NC_005027.1 PMID: 1909424 best DB hits: BLAST: swissprot:P26223; XYNB_BUTFI ENDO-1,4-BETA-XYLANASE B (XYLANASE B); E=2e-10 prf:1718306A; xylanase [Butyrivibrio fibrisolvens]; E=2e-10 gb:AAK04528.1; AE006280_4 (AE006280) sugar hydrolase [Lactococcus; E=4e-07 COG: DR0133; COG0657 Acetyl esterase; E=0.007 PFAM: PF01738; Dienelactone hydrolase; E=0.027; endo-1,4-beta-xylanase B 1848991 1795363 RB3550 Rhodopirellula baltica SH 1 endo-1,4-beta-xylanase B NP_865572.1 1848038 R 243090 CDS NP_865573.1 32472579 1796621 complement(1849023..1849418) 1 NC_005027.1 hypothetical protein 1849418 1796621 RB3552 Rhodopirellula baltica SH 1 hypothetical protein NP_865573.1 1849023 R 243090 CDS NP_865574.1 32472580 1797081 1849463..1850161 1 NC_005027.1 PMID: 9620975 best DB hits: BLAST: pir:T44787; glucokinase (EC 2.7.1.2) [imported] - Bacillus; E=5e-14 swissprot:Q44406; XYLR_ANATH XYLOSE REPRESSOR ----- embl:; E=5e-13 gb:AAK06121.1; AE006432_3 (AE006432) glucose kinase (EC 2.7.1.2); E=6e-12 COG: BS_glcK; COG1940 Transcriptional regulators; E=6e-13 PFAM: PF00480; ROK family; E=3.2e-21; glucokinase 1850161 glcK 1797081 glcK Rhodopirellula baltica SH 1 glucokinase NP_865574.1 1849463 D 243090 CDS NP_865575.1 32472581 1796868 1850205..1852118 1 NC_005027.1 PMID: 3284790 best DB hits: BLAST: swissprot:O97440; GNP2_GIALA GLUCOSAMINE-6-PHOSPHATE ISOMERASE 2; E=1e-44 swissprot:O31458; YBFT_BACSU HYPOTHETICAL 27.3 KD PROTEIN IN; E=5e-44 swissprot:O35000; NAGB_BACSU GLUCOSAMINE-6-PHOSPHATE ISOMERASE; E=4e-43 COG: BS_ybfT; COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate; E=4e-45 DRA0063; COG2120 Uncharacterized proteins, LmbE homologs; E=0.002 PFAM: PF01182; Glucosamine-6-phosphate isome; E=2e-70 PF02585; Uncharacterized LmbE-like pro; E=3.6e-07; glucosamine-6-phosphate deaminase-like protein 1852118 gpi2 1796868 gpi2 Rhodopirellula baltica SH 1 glucosamine-6-phosphate deaminase-like protein NP_865575.1 1850205 D 243090 CDS NP_865576.1 32472582 1793597 1852183..1852356 1 NC_005027.1 hypothetical protein 1852356 1793597 RB3557 Rhodopirellula baltica SH 1 hypothetical protein NP_865576.1 1852183 D 243090 CDS NP_865577.1 32472583 1790924 1852389..1852646 1 NC_005027.1 hypothetical protein 1852646 1790924 RB3559 Rhodopirellula baltica SH 1 hypothetical protein NP_865577.1 1852389 D 243090 CDS NP_865578.1 32472584 1796960 1852643..1853119 1 NC_005027.1 hypothetical protein 1853119 1796960 RB3562 Rhodopirellula baltica SH 1 hypothetical protein NP_865578.1 1852643 D 243090 CDS NP_865579.1 32472585 1790161 1853116..1853673 1 NC_005027.1 signal peptide 1853673 1790161 RB3564 Rhodopirellula baltica SH 1 signal peptide NP_865579.1 1853116 D 243090 CDS NP_865580.1 32472586 1796791 1853670..1854083 1 NC_005027.1 signal peptide 1854083 1796791 RB3565 Rhodopirellula baltica SH 1 signal peptide NP_865580.1 1853670 D 243090 CDS NP_865581.1 32472587 1795357 1854080..1854274 1 NC_005027.1 hypothetical protein 1854274 1795357 RB3566 Rhodopirellula baltica SH 1 hypothetical protein NP_865581.1 1854080 D 243090 CDS NP_865582.1 32472588 1796242 1854181..1854339 1 NC_005027.1 hypothetical protein 1854339 1796242 RB3567 Rhodopirellula baltica SH 1 hypothetical protein NP_865582.1 1854181 D 243090 CDS NP_865583.1 32472589 1793844 complement(1854195..1854353) 1 NC_005027.1 hypothetical protein 1854353 1793844 RB3568 Rhodopirellula baltica SH 1 hypothetical protein NP_865583.1 1854195 R 243090 CDS NP_865584.1 32472590 1797012 complement(1854357..1854728) 1 NC_005027.1 PMID: 11759840; hypothetical protein 1854728 1797012 RB3569 Rhodopirellula baltica SH 1 hypothetical protein NP_865584.1 1854357 R 243090 CDS NP_865585.1 32472591 1795731 complement(1854745..1855002) 1 NC_005027.1 hypothetical protein 1855002 1795731 RB3570 Rhodopirellula baltica SH 1 hypothetical protein NP_865585.1 1854745 R 243090 CDS NP_865586.1 32472592 1793316 complement(1855012..1858557) 1 NC_005027.1 PMID: 8921895 best DB hits: BLAST: swissprot:P44677; TOLB_HAEIN TOLB PROTEIN PRECURSOR ----- pir:; E=4e-04 pir:JC5213; tolB protein - Haemophilus influenzae ----- gb:; E=0.001 pir:F82625; TolB protein precursor XF1897 [imported] - Xylella; E=0.001 COG: HI0382; COG0823 Periplasmic component of the Tol biopolymer transport; E=4e-05; TolB protein [precursor] 1858557 1793316 RB3571 Rhodopirellula baltica SH 1 TolB protein [precursor] NP_865586.1 1855012 R 243090 CDS NP_865587.1 32472593 1791129 complement(1858576..1858914) 1 NC_005027.1 hypothetical protein 1858914 1791129 RB3574 Rhodopirellula baltica SH 1 hypothetical protein NP_865587.1 1858576 R 243090 CDS NP_865588.1 32472594 1795355 1858779..1859237 1 NC_005027.1 hypothetical protein 1859237 1795355 RB3575 Rhodopirellula baltica SH 1 hypothetical protein NP_865588.1 1858779 D 243090 CDS NP_865589.1 32472595 1796265 1859377..1859925 1 NC_005027.1 signal peptide 1859925 1796265 RB3577 Rhodopirellula baltica SH 1 signal peptide NP_865589.1 1859377 D 243090 CDS NP_865590.1 32472596 1794685 1859873..1860910 1 NC_005027.1 best DB hits: BLAST: pir:S75452; hypothetical protein slr1506 - Synechocystis sp. (strain; E=2e-09 pir:S76481; hypothetical protein - Synechocystis sp. (strain PCC; E=5e-09 ddbj:BAB04446.1; (AP001509) BH0727~unknown conserved protein in; E=5e-08; hypothetical protein 1860910 1794685 RB3579 Rhodopirellula baltica SH 1 hypothetical protein NP_865590.1 1859873 D 243090 CDS NP_865591.1 32472597 1796022 1861026..1861430 1 NC_005027.1 signal peptide 1861430 1796022 RB3582 Rhodopirellula baltica SH 1 signal peptide NP_865591.1 1861026 D 243090 CDS NP_865592.1 32472598 1790202 complement(1861424..1861582) 1 NC_005027.1 hypothetical protein 1861582 1790202 RB3583 Rhodopirellula baltica SH 1 hypothetical protein NP_865592.1 1861424 R 243090 CDS NP_865593.1 32472599 1790908 1861605..1863539 1 NC_005027.1 PMID: 10952301 best DB hits: BLAST: pir:F82291; conserved hypothetical protein VC0689 [imported] -; E=4e-81 pir:G83177; probable sodiumhydrogen antiporter PA3739 [imported] -; E=3e-80 pir:S75742; hypothetical protein sll0556 - Synechocystis sp. (strain; E=1e-36 COG: VC0689_1; COG0025 NhaP-type Na+/H+ and K+/H+ antiporters; E=2e-58 PFAM: PF00999; Sodium/hydrogen exchanger fami; E=8.8e-35 PF00698; Acyl transferase domain; E=0.27 PF02254; KTN NAD-binding domain; E=0.0024; sodium/hydrogen antiporter 1863539 1790908 RB3584 Rhodopirellula baltica SH 1 sodium/hydrogen antiporter NP_865593.1 1861605 D 243090 CDS NP_865594.1 32472600 1790489 1863536..1864195 1 NC_005027.1 hypothetical protein 1864195 1790489 RB3585 Rhodopirellula baltica SH 1 hypothetical protein NP_865594.1 1863536 D 243090 CDS NP_865595.1 32472601 1796589 complement(1864455..1864796) 1 NC_005027.1 hypothetical protein 1864796 1796589 RB3587 Rhodopirellula baltica SH 1 hypothetical protein NP_865595.1 1864455 R 243090 CDS NP_865596.1 32472602 1796366 1864876..1866579 1 NC_005027.1 best DB hits: BLAST: pir:G82262; probable exopolysaccharide biosynthesis protein VC0937; E=3e-06 pir:S67819; GumC protein - Xanthomonas campestris ----- gb:; E=3e-04 pir:D83367; hypothetical protein PA2235 [imported] - Pseudomonas; E=0.002 COG: PA2235; COG3206 Uncharacterized protein involved in; E=2e-04 PFAM: PF02706; Chain length determinant protein; E=0.23; exopolysaccharide biosynthesis protein 1866579 1796366 RB3589 Rhodopirellula baltica SH 1 exopolysaccharide biosynthesis protein NP_865596.1 1864876 D 243090 CDS NP_865597.1 32472603 1790647 1866735..1868054 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB58332.1; (AL121855) transferase [Streptomyces; E=9e-44 pir:D72511; probable hexosyltransferase (EC 2.4.1.-) APE2066; E=4e-12 pir:D69143; LPS biosynthesis RfbU related protein - Methanobacterium; E=4e-12 COG: APE2066; COG0438 Predicted glycosyltransferases; E=4e-13 PFAM: PF00534; Glycosyl transferases group 1; E=8e-32; transferase 1868054 1790647 RB3591 Rhodopirellula baltica SH 1 transferase NP_865597.1 1866735 D 243090 CDS NP_865598.1 32472604 1792924 1867948..1868775 1 NC_005027.1 PMID: 9384377 best DB hits: BLAST: pir:G69849; endo-1,4-beta-xylanase homolog yjeA - Bacillus subtilis; E=6e-04 pir:A70081; conserved hypothetical protein yxkH - Bacillus subtilis; E=0.001 pir:A75376; probable oligosaccharide deacetylase - Deinococcus; E=0.003 COG: BS_yjeA_2; COG0726 Predicted xylanase/chitin deacetylase; E=6e-05 PFAM: PF01522; Polysaccharide deacetylase; E=0.0029; endo-1,4-beta-xylanase 1868775 1792924 RB3593 Rhodopirellula baltica SH 1 endo-1,4-beta-xylanase NP_865598.1 1867948 D 243090 CDS NP_865599.1 32472605 1797071 1868895..1869329 1 NC_005027.1 PMID: 11016950 best DB hits: BLAST: gb:AAG20546.1; (AE005125) nitrogen fixation protein; NifU; E=2e-22 ddbj:BAB07187.1; (AP001518) nitrogen fixation protein [Bacillus; E=4e-16 swissprot:Q9X192; NIFU_THEMA NIFU-LIKE PROTEIN ----- pir:; E=4e-15 COG: VNG2472G; COG0822 NifU homologs involved in Fe-S cluster formation; E=2e-23 PFAM: PF01592; NifU-like N terminal domain; E=1e-22; nitrogen fixation protein NifU 1869329 nifU 1797071 nifU Rhodopirellula baltica SH 1 nitrogen fixation protein NifU NP_865599.1 1868895 D 243090 CDS NP_865600.1 32472606 1795333 1869326..1870621 1 NC_005027.1 PMID: 9384377 PMID: 2644218 PMID: 3040672 PMID: 8464885 PMID: 8161529 best DB hits: BLAST: pir:T35993; probable aminotransferase - Streptomyces coelicolor; E=3e-98 pir:S76601; hypothetical protein - Synechocystis sp. (strain PCC; E=1e-97 pir:F70019; nifS protein homolog yurW - Bacillus subtilis -----; E=3e-95 COG: slr0077; COG0520 Selenocysteine lyase; E=1e-98 PFAM: PF00266; Aminotransferase class-V; E=7.2e-16; NifS protein homolog yurW 1870621 1795333 RB3597 Rhodopirellula baltica SH 1 NifS protein homolog yurW NP_865600.1 1869326 D 243090 CDS NP_865601.1 32472607 1794256 1870618..1871946 1 NC_005027.1 PMID: 3021756 PMID: 6284744 PMID: 9278503 best DB hits: BLAST: gb:AAA24766.1; (J02599) Exonuclease VII large subunit; E=2e-56 swissprot:P04994; EX7L_ECOLI EXODEOXYRIBONUCLEASE VII LARGE; E=4e-56 pir:B82282; exodeoxyribonuclease VII, large chain VC0766 [imported]; E=2e-55 COG: xseA; COG1570 Exonuclease VII, large subunit; E=4e-57 PFAM: PF01336; OB-fold nucleic acid binding dom; E=3.6e-11 PF02601; Exonuclease VII, large subunit; E=3.5e-45; exodeoxyribonuclease VII large subunit 1871946 xseA 1794256 xseA Rhodopirellula baltica SH 1 exodeoxyribonuclease VII large subunit NP_865601.1 1870618 D 243090 CDS NP_865602.1 32472608 1795510 1871888..1872985 1 NC_005027.1 PMID: 8453663 PMID: 9118811 best DB hits: BLAST: gb:AAF53651.1; (AE003657) kel gene product [Drosophila; E=8e-17 swissprot:Q04652; KELC_DROME RING CANAL KELCH PROTEIN [CONTAINS:; E=8e-17 gb:AAA53471.1; (L08483) ring canal protein [Drosophila; E=1e-15 PFAM: PF01344; Kelch motif; E=2.6e-07; ring canal kelch protein 1872985 kel 1795510 kel Rhodopirellula baltica SH 1 ring canal kelch protein NP_865602.1 1871888 D 243090 CDS NP_865603.1 32472609 1791077 complement(1873016..1873519) 1 NC_005027.1 signal peptide 1873519 1791077 RB3600 Rhodopirellula baltica SH 1 signal peptide NP_865603.1 1873016 R 243090 CDS NP_865604.1 32472610 1791826 complement(1873531..1874262) 1 NC_005027.1 PMID: 8200539 best DB hits: BLAST: embl:CAB61821.1; (AL133236) polyguluronate lyase; E=1e-33 ddbj:BAA83339.1; (AB030481) polyguluronate lyase [Corynebacterium; E=7e-33 swissprot:Q59478; ALYA_KLEPN ALGINATE LYASE PRECURSOR; E=4e-08 PFAM: PF00217; ATP:guanido phosphotransferase; E=0.69; alginate lyase 1874262 1791826 RB3601 Rhodopirellula baltica SH 1 alginate lyase NP_865604.1 1873531 R 243090 CDS NP_865605.1 32472611 1793585 complement(1874427..1875461) 1 NC_005027.1 PMID: 9384377 best DB hits: BLAST: gb:AAB01192.1; (U55864) apical gut membrane polyprotein; E=0.015 embl:CAB60199.1; (AJ250881) P1a6 protein [Haemonchus contortus]; E=0.015 swissprot:P39839; YUXL_BACSU PROBABLE PEPTIDASE YUXL -----; E=0.034 COG: BS_yuxL; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; E=0.003 HI0382; COG0823 Periplasmic component of the Tol biopolymer; E=0.007; peptidase yuxL 1875461 1793585 RB3603 Rhodopirellula baltica SH 1 peptidase yuxL NP_865605.1 1874427 R 243090 CDS NP_865606.1 32472612 1790786 complement(1875637..1877481) 1 NC_005027.1 PMID: 9384377 best DB hits: BLAST: pir:H83386; conserved hypothetical protein PA2072 [imported] -; E=1e-82 swissprot:P55552; Y4LL_RHISN HYPOTHETICAL 91.8 KD PROTEIN Y4LL; E=9e-82 pir:C83070; conserved hypothetical protein PA4601 [imported] -; E=7e-81 COG: PA2072_4; COG2200 Diguanylate cyclase/phosphodiesterase domain 2; E=2e-52 yddU_3; COG2200 Diguanylate cyclase/phosphodiesterase domain 2 (EAL); E=1e-45 PA0575_4; COG2200 Diguanylate cyclase/phosphodiesterase domain 2; E=2e-44 PFAM: PF00072; Response regulator receiver doma; E=0.52 PF00990; GGDEF domain; E=2.2e-63 PF00563; Domain of unknown function 2; E=3.6e-67; response regulator 1877481 1790786 RB3605 Rhodopirellula baltica SH 1 response regulator NP_865606.1 1875637 R 243090 CDS NP_865607.1 32472613 1796596 complement(1877478..1879433) 1 NC_005027.1 PMID: 2046550 PMID: 1766374 best DB hits: BLAST: gb:AAD12184.1; (U57900) utilizing regulatory protein tutC; E=4e-13 swissprot:P26489; FIXL_AZOCA SENSOR PROTEIN FIXL ----- pir:; E=6e-13 ddbj:BAA89701.1; (AB030079) 145..153:the transposed position of; E=7e-13 COG: VNG1464G_1; COG2202 PAS/PAC domain; E=4e-11 BH0536; COG0642 Sensory transduction histidine kinases; E=4e-11 BS_ytvA_1; COG2202 PAS/PAC domain; E=2e-09 PFAM: PF00989; PAS domain; E=0.00031 PF00785; PAC motif; E=3e-08 PF02518; Histidine kinase-, DNA gyrase B-; E=8e-26; sensor protein fixL 1879433 fixL 1796596 fixL Rhodopirellula baltica SH 1 sensor protein fixL NP_865607.1 1877478 R 243090 CDS NP_865608.1 32472614 1790473 complement(1879436..1880029) 1 NC_005027.1 hypothetical protein 1880029 1790473 RB3607 Rhodopirellula baltica SH 1 hypothetical protein NP_865608.1 1879436 R 243090 CDS NP_865609.1 32472615 1794110 complement(1880082..1880339) 1 NC_005027.1 hypothetical protein 1880339 1794110 RB3610 Rhodopirellula baltica SH 1 hypothetical protein NP_865609.1 1880082 R 243090 CDS NP_865610.1 32472616 1791340 1880300..1880452 1 NC_005027.1 hypothetical protein 1880452 1791340 RB3611 Rhodopirellula baltica SH 1 hypothetical protein NP_865610.1 1880300 D 243090 CDS NP_865611.1 32472617 1793876 1880446..1881261 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: embl:CAA98155.1; (Z73914) ORF378 protein [Pseudomonas stutzeri]; E=1e-15 pir:E83414; conserved hypothetical protein PA1854 [imported] -; E=2e-14 pir:S77003; hypothetical protein slr0789 - Synechocystis sp. (strain; E=1e-10; hypothetical protein 1881261 1793876 RB3612 Rhodopirellula baltica SH 1 hypothetical protein NP_865611.1 1880446 D 243090 CDS NP_865612.1 32472618 1796693 1881291..1881455 1 NC_005027.1 hypothetical protein 1881455 1796693 RB3613 Rhodopirellula baltica SH 1 hypothetical protein NP_865612.1 1881291 D 243090 CDS NP_865613.1 32472619 1790445 complement(1881510..1882976) 1 NC_005027.1 PMID: 8346225 PMID: 9278503 best DB hits: BLAST: swissprot:Q06065; ATOC_ECOLI ACETOACETATE METABOLISM REGULATORY; E=8e-80 swissprot:P21712; YFHA_ECOLI HYPOTHETICAL 49.1 KDA PROTEIN IN; E=3e-75 gb:AAG45333.1; AF273214_1 (AF273214) SasR [Myxococcus xanthus]; E=4e-74 COG: atoC; COG2204 AAA superfamily ATPases with N-terminal receiver; E=8e-81 PFAM: PF00072; Response regulator receiver doma; E=5.1e-26 PF00158; Sigma-54 interaction domain; E=2.8e-114; acetoacetate metabolism regulatory protein atoC 1882976 atoC 1790445 atoC Rhodopirellula baltica SH 1 acetoacetate metabolism regulatory protein atoC NP_865613.1 1881510 R 243090 CDS NP_865614.1 32472620 1794029 complement(1882928..1884160) 1 NC_005027.1 PMID: 8346225 PMID: 9278503 best DB hits: BLAST: embl:CAB64771.1; (AJ007794) kin1 [Bacillus cereus] -----; E=3e-20 gb:AAD47812.1; (AF163841) histidine protein kinase; E=1e-19 pir:G82495; probable C4-dicarboxylate transport sensor protein; E=7e-19 COG: VCA0141; COG0642 Sensory transduction histidine kinases; E=7e-20 PFAM: PF00989; PAS domain; E=0.031 PF00785; PAC motif; E=1.5e-10 PF00512; His Kinase A (phosphoacceptor) doma; E=1.3e-12; sensor protein atoS 1884160 atoS 1794029 atoS Rhodopirellula baltica SH 1 sensor protein atoS NP_865614.1 1882928 R 243090 CDS NP_865615.1 32472621 1791608 complement(1884325..1884768) 1 NC_005027.1 hypothetical protein 1884768 1791608 RB3618 Rhodopirellula baltica SH 1 hypothetical protein NP_865615.1 1884325 R 243090 CDS NP_865616.1 32472622 1791674 1884713..1885000 1 NC_005027.1 hypothetical protein 1885000 1791674 RB3621 Rhodopirellula baltica SH 1 hypothetical protein NP_865616.1 1884713 D 243090 CDS NP_865617.1 32472623 1794060 1885051..1886373 1 NC_005027.1 PMID: 2839489 PMID: 1657980 PMID: 1645730 PMID: 8381959 best DB hits: BLAST: pir:B71805; Na+H+-exchanging protein 1 - Helicobacter pylori; E=4e-73 pir:H64713; Na+H+-exchanging protein - Helicobacter pylori (strain; E=1e-72 pir:JX0360; Na+H+-exchanging protein - Vibrio parahaemolyticus; E=2e-65 COG: jhp1447; COG3004 Na+/H+ antiporter; E=4e-74; Na(+)/H(+) antiporter 1 1886373 nhaA 1794060 nhaA Rhodopirellula baltica SH 1 Na(+)/H(+) antiporter 1 NP_865617.1 1885051 D 243090 CDS NP_865618.1 32472624 1790871 complement(1886488..1886670) 1 NC_005027.1 hypothetical protein 1886670 1790871 RB3623 Rhodopirellula baltica SH 1 hypothetical protein NP_865618.1 1886488 R 243090 CDS NP_865619.1 32472625 1792414 1886670..1886786 1 NC_005027.1 hypothetical protein 1886786 1792414 RB3624 Rhodopirellula baltica SH 1 hypothetical protein NP_865619.1 1886670 D 243090 CDS NP_865620.1 32472626 1795858 1886871..1887470 1 NC_005027.1 signal peptide 1887470 1795858 RB3625 Rhodopirellula baltica SH 1 signal peptide NP_865620.1 1886871 D 243090 CDS NP_865621.1 32472627 1794450 complement(1887441..1887656) 1 NC_005027.1 hypothetical protein 1887656 1794450 RB3626 Rhodopirellula baltica SH 1 hypothetical protein NP_865621.1 1887441 R 243090 CDS NP_865622.1 32472628 1793897 complement(1887640..1888482) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:G75469; conserved hypothetical protein - Deinococcus radiodurans; E=5e-33 swissprot:Q49757; YP69_MYCLE HYPOTHETICAL 31.1 KDA PROTEIN; E=4e-09 pir:E83429; conserved hypothetical protein PA1732 [imported] -; E=6e-09 COG: DR0843; COG1305 transglutaminases, cysteine; E=5e-34 PFAM: PF01841; Transglutaminase-like superfam; E=5.8e-16; hypothetical protein 1888482 1793897 RB3627 Rhodopirellula baltica SH 1 hypothetical protein NP_865622.1 1887640 R 243090 CDS NP_865623.1 32472629 1794325 1888468..1889409 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:D83354; hypothetical protein PA2331 [imported] - Pseudomonas; E=7e-26 pir:B81134; macrophage infectivity potentiator-related protein; E=2e-19 pir:D81888; hypothetical protein NMA1203 [imported] - Neisseria; E=4e-18 COG: PA2331; COG2128 Uncharacterized ACR; E=6e-27; hypothetical protein 1889409 1794325 RB3630 Rhodopirellula baltica SH 1 hypothetical protein NP_865623.1 1888468 D 243090 CDS NP_865624.1 32472630 1792210 1889505..1890254 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S77301; hypothetical protein sll1308 - Synechocystis sp. (strain; E=2e-62 gb:AAD46515.1; AF145724_4 (AF145724) oxidoreductase homolog; E=2e-16 pir:T37016; probable oxidoreductase - Streptomyces coelicolor; E=2e-14 COG: sll1308; COG1028 Dehydrogenases with different specificities; E=2e-63 Rv3174; COG1028 Dehydrogenases with different specificities (related; E=4e-14 slr0315; COG1028 Dehydrogenases with different specificities; E=1e-10 PFAM: PF00107; Zinc-binding dehydrogenases; E=0.013 PF00106; short chain dehydrogenase; E=2.2e-34; short chain dehydrogenase 1890254 1792210 RB3632 Rhodopirellula baltica SH 1 short chain dehydrogenase NP_865624.1 1889505 D 243090 CDS NP_865625.1 32472631 1792148 complement(1890211..1890483) 1 NC_005027.1 hypothetical protein 1890483 1792148 RB3633 Rhodopirellula baltica SH 1 hypothetical protein NP_865625.1 1890211 R 243090 CDS NP_865626.1 32472632 1793811 complement(1890438..1890641) 1 NC_005027.1 hypothetical protein 1890641 1793811 RB3634 Rhodopirellula baltica SH 1 hypothetical protein NP_865626.1 1890438 R 243090 CDS NP_865627.1 32472633 1790263 1890589..1891878 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB94634.1; (AL359215) secreted glycosyl hydrolase.; E=4e-06 pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=3e-05 pir:T35028; probable glycosyl hydrolase - Streptomyces coelicolor; E=2e-04; secreted glycosyl hydrolase 1891878 1790263 RB3635 Rhodopirellula baltica SH 1 secreted glycosyl hydrolase NP_865627.1 1890589 D 243090 CDS NP_865628.1 32472634 1796107 1891875..1892711 1 NC_005027.1 PMID: 9384377 best DB hits: BLAST: pir:C69797; conserved hypothetical protein yesT - Bacillus subtilis; E=4e-27 gb:AAF25818.1; AF184175_1 (AF184175) cephalosporin C deacetylase; E=2e-23 pir:H69797; rhamnogalacturonan acetylesterase homolog yesY -; E=2e-22; hypothetical protein 1892711 1796107 RB3639 Rhodopirellula baltica SH 1 hypothetical protein NP_865628.1 1891875 D 243090 CDS NP_865629.1 32472635 1792978 1892708..1894723 1 NC_005027.1 PMID: 9384377 best DB hits: BLAST: swissprot:O34499; YKGB_BACSU HYPOTHETICAL 38.4 KDA PROTEIN IN; E=2e-41 embl:CAB66198.1; (AL136502) hypothetical protein SCF43.09.; E=2e-41 pir:A83120; conserved hypothetical protein PA4204 [imported] -; E=9e-41 COG: BS_ykgB; COG2706 3-carboxymuconate cyclase; E=2e-42 PFAM: PF01453; Lectin (probable mannose binding); E=0.047; cycloisomerase 1894723 1792978 RB3641 Rhodopirellula baltica SH 1 cycloisomerase NP_865629.1 1892708 D 243090 CDS NP_865630.1 32472636 1791453 complement(1894801..1895184) 1 NC_005027.1 hypothetical protein 1895184 1791453 RB3644 Rhodopirellula baltica SH 1 hypothetical protein NP_865630.1 1894801 R 243090 CDS NP_865631.1 32472637 1795050 complement(1895230..1895505) 1 NC_005027.1 hypothetical protein 1895505 1795050 RB3645 Rhodopirellula baltica SH 1 hypothetical protein NP_865631.1 1895230 R 243090 CDS NP_865632.1 32472638 1796295 1895252..1895407 1 NC_005027.1 hypothetical protein 1895407 1796295 RB3646 Rhodopirellula baltica SH 1 hypothetical protein NP_865632.1 1895252 D 243090 CDS NP_865633.1 32472639 1792809 complement(1895295..1895447) 1 NC_005027.1 hypothetical protein 1895447 1792809 RB3647 Rhodopirellula baltica SH 1 hypothetical protein NP_865633.1 1895295 R 243090 CDS NP_865634.1 32472640 1794006 complement(1895481..1896881) 1 NC_005027.1 best DB hits: BLAST: pir:T36464; probable oxidoreductase - Streptomyces coelicolor; E=3e-07 ddbj:BAB05884.1; (AP001514) BH2165~unknown conserved protein; E=6e-06 ddbj:BAB04206.1; (AP001508) BH0487~unknown conserved protein; E=3e-05 COG: BH2165; COG0673 Predicted dehydrogenases and related proteins; E=6e-07 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=6e-18; oxidoreductase 1896881 1794006 RB3648 Rhodopirellula baltica SH 1 oxidoreductase NP_865634.1 1895481 R 243090 CDS NP_865635.1 32472641 1794103 1896821..1897060 1 NC_005027.1 hypothetical protein 1897060 1794103 RB3650 Rhodopirellula baltica SH 1 hypothetical protein NP_865635.1 1896821 D 243090 CDS NP_865636.1 32472642 1790851 1896937..1897104 1 NC_005027.1 hypothetical protein 1897104 1790851 RB3651 Rhodopirellula baltica SH 1 hypothetical protein NP_865636.1 1896937 D 243090 CDS NP_865637.1 32472643 1794127 1897256..1898083 1 NC_005027.1 PMID: 10952301 best DB hits: BLAST: pir:F82388; transcriptional regulator AraCXylS family VCA1001; E=3e-25 pir:C83237; probable transcriptional regulator PA3269 [imported] -; E=2e-24 embl:CAB88172.1; (AL352972) araC-family regulatory; E=1e-23 COG: VCA1001; COG2207 AraC-type DNA-binding domain-containing proteins; E=2e-26 PFAM: PF00165; Bacterial regulatory helix-turn-heli; E=3e-20; transcriptional regulator 1898083 1794127 RB3653 Rhodopirellula baltica SH 1 transcriptional regulator NP_865637.1 1897256 D 243090 CDS NP_865638.1 32472644 1794012 1898112..1898300 1 NC_005027.1 hypothetical protein 1898300 1794012 RB3654 Rhodopirellula baltica SH 1 hypothetical protein NP_865638.1 1898112 D 243090 CDS NP_865639.1 32472645 1793037 complement(1898244..1898435) 1 NC_005027.1 hypothetical protein 1898435 1793037 RB3655 Rhodopirellula baltica SH 1 hypothetical protein NP_865639.1 1898244 R 243090 CDS NP_865640.1 32472646 1796719 1898389..1899330 1 NC_005027.1 PMID: 9349712 PMID: 10639368 best DB hits: BLAST: gb:AAF01818.1; AF187532_14 (AF187532) polyketide cyclase; E=6e-05 pir:D70817; hypothetical protein Rv1716 - Mycobacterium tuberculosis; E=0.17 gb:AAG30196.1; (AF293442) cyclase [Streptomyces sp. R1128]; E=0.33; polyketide cyclase/dehydrase 1899330 1796719 RB3656 Rhodopirellula baltica SH 1 polyketide cyclase/dehydrase NP_865640.1 1898389 D 243090 CDS NP_865641.1 32472647 1790888 1899390..1900178 1 NC_005027.1 PMID: 1556094 PMID: 9384377 best DB hits: BLAST: pir:E70027; probable 3-oxoacyl-[acyl-carrier-protein] reductase (EC; E=6e-73 pir:H83476; probable short-chain dehydrogenase PA1344 [imported] -; E=7e-62 embl:CAB60468.1; (AL132856) probable oxidoreductase [Streptomyces; E=8e-54 COG: BS_yvaG; COG1028 Dehydrogenases with different specificities; E=6e-74 PA1344; COG1028 Dehydrogenases with different specificities (related; E=7e-63 BS_yvrD; COG1028 Dehydrogenases with different specificities; E=3e-54 PFAM: PF00106; short chain dehydrogenase; E=1.9e-41 PF00678; Short chain dehydrogenase/reduct; E=3.3e-08; 3-oxoacyl-ACP reductase 1900178 1790888 RB3657 Rhodopirellula baltica SH 1 3-oxoacyl-ACP reductase NP_865641.1 1899390 D 243090 CDS NP_865642.1 32472648 1792381 complement(1900175..1900393) 1 NC_005027.1 hypothetical protein 1900393 1792381 RB3658 Rhodopirellula baltica SH 1 hypothetical protein NP_865642.1 1900175 R 243090 CDS NP_865643.1 32472649 1790605 1900428..1900607 1 NC_005027.1 signal peptide 1900607 1790605 RB3659 Rhodopirellula baltica SH 1 signal peptide NP_865643.1 1900428 D 243090 CDS NP_865644.1 32472650 1790900 complement(1900570..1900854) 1 NC_005027.1 hypothetical protein 1900854 1790900 RB3660 Rhodopirellula baltica SH 1 hypothetical protein NP_865644.1 1900570 R 243090 CDS NP_865645.1 32472651 1789994 complement(1900902..1901810) 1 NC_005027.1 hypothetical protein 1901810 1789994 RB3661 Rhodopirellula baltica SH 1 hypothetical protein NP_865645.1 1900902 R 243090 CDS NP_865646.1 32472652 1791650 complement(1901893..1902024) 1 NC_005027.1 hypothetical protein 1902024 1791650 RB3662 Rhodopirellula baltica SH 1 hypothetical protein NP_865646.1 1901893 R 243090 CDS NP_865647.1 32472653 1795370 complement(1902119..1902328) 1 NC_005027.1 hypothetical protein 1902328 1795370 RB3663 Rhodopirellula baltica SH 1 hypothetical protein NP_865647.1 1902119 R 243090 CDS NP_865648.1 32472654 1791708 1902304..1902561 1 NC_005027.1 hypothetical protein 1902561 1791708 RB3664 Rhodopirellula baltica SH 1 hypothetical protein NP_865648.1 1902304 D 243090 CDS NP_865649.1 32472655 1796706 complement(1902717..1903076) 1 NC_005027.1 hypothetical protein 1903076 1796706 RB3665 Rhodopirellula baltica SH 1 hypothetical protein NP_865649.1 1902717 R 243090 CDS NP_865650.1 32472656 1794553 complement(1903100..1903270) 1 NC_005027.1 hypothetical protein 1903270 1794553 RB3668 Rhodopirellula baltica SH 1 hypothetical protein NP_865650.1 1903100 R 243090 CDS NP_865651.1 32472657 1792357 1903269..1903577 1 NC_005027.1 hypothetical protein 1903577 1792357 RB3669 Rhodopirellula baltica SH 1 hypothetical protein NP_865651.1 1903269 D 243090 CDS NP_865652.1 32472658 1792195 complement(1903537..1903998) 1 NC_005027.1 PMID: 2824781 best DB hits: BLAST: gb:AAK04755.1; AE006299_1 (AE006299) transposase of IS981C; E=1e-09 gb:AAK05346.1; AE006357_1 (AE006357) transposase of IS981G; E=1e-09 gb:AAK06124.1; AE006432_6 (AE006432) transposase of IS981J; E=1e-09 COG: PA0257; COG2801 transposase; E=1e-07 yagA; COG1425 Predicted transposase; E=6e-05 HI1721; COG2801 transposase; E=9e-05 PFAM: PF00665; Integrase core domain; E=2.5e-27; transposase of IS981C 1903998 1792195 RB3670 Rhodopirellula baltica SH 1 transposase of IS981C NP_865652.1 1903537 R 243090 CDS NP_865653.1 32472659 1790378 1904022..1904294 1 NC_005027.1 hypothetical protein 1904294 1790378 RB3672 Rhodopirellula baltica SH 1 hypothetical protein NP_865653.1 1904022 D 243090 CDS NP_865654.1 32472660 1790230 complement(1904396..1904647) 1 NC_005027.1 best DB hits: PFAM: PF00501; AMP-binding enzyme; E=0.031; hypothetical protein 1904647 1790230 RB3673 Rhodopirellula baltica SH 1 hypothetical protein NP_865654.1 1904396 R 243090 CDS NP_865655.1 32472661 1796292 1904552..1906780 1 NC_005027.1 best DB hits: BLAST: embl:CAA84826.1; (Z35768) ORF YBL007c [Saccharomyces cerevisiae]; E=0.22; signal peptide 1906780 1796292 RB3675 Rhodopirellula baltica SH 1 signal peptide NP_865655.1 1904552 D 243090 CDS NP_865656.1 32472662 1790443 1906968..1907591 1 NC_005027.1 PMID: 9473043 best DB hits: BLAST: embl:CAB53356.1; (AJ010260) NosX protein [Paracoccus; E=6e-14 gb:AAD09162.2; (AF047429) NosX [Achromobacter cycloclastes]; E=1e-13 pir:F81184; thiamin biosynthesis lipoprotein ApbE NMB0563 [imported]; E=1e-12 COG: NMB0563; COG1477 Membrane-associated lipoprotein involved in; E=1e-13 VC2289; COG1477 Membrane-associated lipoprotein involved in thiamine; E=2e-13 aq_1258; COG1477 Membrane-associated lipoprotein involved in; E=1e-09 PFAM: PF02424; ApbE family; E=2.7e-28; thiamin biosynthesis lipoprotein apbE 1907591 apbE 1790443 apbE Rhodopirellula baltica SH 1 thiamin biosynthesis lipoprotein apbE NP_865656.1 1906968 D 243090 CDS NP_865657.1 32472663 1790973 1907555..1908097 1 NC_005027.1 PMID: 20437337 best DB hits: BLAST: pir:B83125; conserved hypothetical protein PA4169 [imported] -; E=5e-32 embl:CAB71827.1; (AL138662) hypothetical protein SC8E4A.22; E=2e-14 pir:D70063; hypothetical protein ywnA - Bacillus subtilis -----; E=8e-08 COG: PA4169; COG1959 Predicted transcriptional regulator; E=5e-33 PFAM: PF02082; Uncharacterized protein family UPF00; E=0.0035; hypothetical protein 1908097 1790973 RB3680 Rhodopirellula baltica SH 1 hypothetical protein NP_865657.1 1907555 D 243090 CDS NP_865658.1 32472664 1796997 1908081..1908776 1 NC_005027.1 PMID: 10086842 best DB hits: BLAST: pir:T44299; hypothetical protein ycgJ [imported] - Bacillus; E=2e-25 ddbj:BAB04377.1; (AP001509) BH0658~unknown conserved protein; E=2e-25 pir:G83392; hypothetical protein PA2034 [imported] - Pseudomonas; E=1e-08 COG: BH0658; COG0500 SAM-dependent methyltransferases; E=2e-26 DR2405; COG2226 Methylase involved in ubiquinone/menaquinone; E=5e-04 PA3515; COG0500 SAM-dependent methyltransferases; E=0.002; hypothetical protein 1908776 1796997 RB3681 Rhodopirellula baltica SH 1 hypothetical protein NP_865658.1 1908081 D 243090 CDS NP_865659.1 32472665 1791093 1908788..1909108 1 NC_005027.1 hypothetical protein 1909108 1791093 RB3682 Rhodopirellula baltica SH 1 hypothetical protein NP_865659.1 1908788 D 243090 CDS NP_865660.1 32472666 1793885 1909087..1909212 1 NC_005027.1 hypothetical protein 1909212 1793885 RB3683 Rhodopirellula baltica SH 1 hypothetical protein NP_865660.1 1909087 D 243090 CDS NP_865661.1 32472667 1792962 complement(1909183..1909380) 1 NC_005027.1 hypothetical protein 1909380 1792962 RB3684 Rhodopirellula baltica SH 1 hypothetical protein NP_865661.1 1909183 R 243090 CDS NP_865662.1 32472668 1796889 complement(1909540..1910523) 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAC14345.1; (AL445945) zinc-binding oxidoreductase; E=2e-32 pir:C70418; probable alcohol dehydrogenase (EC 1.1.1.-) - Aquifex; E=4e-28 embl:CAB70647.1; (AL137242) zinc-binding oxidoreductase; E=2e-27 COG: aq_1362; COG0604 NADPH:quinone reductase and related Zn-dependent; E=3e-29 PFAM: PF00696; Amino acid kinase; E=0.7 PF00107; Zinc-binding dehydrogenases; E=2.2e-72; zinc-binding oxidoreductase 1910523 1796889 RB3686 Rhodopirellula baltica SH 1 zinc-binding oxidoreductase NP_865662.1 1909540 R 243090 CDS NP_865663.1 32472669 1790507 complement(1910468..1910629) 1 NC_005027.1 hypothetical protein 1910629 1790507 RB3688 Rhodopirellula baltica SH 1 hypothetical protein NP_865663.1 1910468 R 243090 CDS NP_865664.1 32472670 1790233 complement(1910656..1911402) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:C83343; probable hydrolase PA2419 [imported] - Pseudomonas; E=6e-66 gb:AAD16957.1; (AF106566) SlsA [Salmonella typhimurium]; E=2e-62 pdb:1YAC; A Chain A, The 1.8 Angstrom Crystal Structure Of The; E=6e-42 COG: PA2419; COG1335 Amidases related to nicotinamidase; E=6e-67 PFAM: PF00857; Isochorismatase; E=7e-11; hydrolase of unknown specificity 1911402 1790233 RB3689 Rhodopirellula baltica SH 1 hydrolase of unknown specificity NP_865664.1 1910656 R 243090 CDS NP_865665.1 32472671 1797119 complement(1911487..1912413) 1 NC_005027.1 PMID: 10543838 best DB hits: BLAST: pir:E83158; probable transcriptional regulator PA3898 [imported] -; E=1e-17 ddbj:BAA86295.1; (AB006902) XylsAraC-type transcriptional; E=2e-17 pir:S77548; lumQ protein - Synechocystis sp. (strain PCC 6803); E=4e-16 COG: PA3898; COG2207 AraC-type DNA-binding domain-containing proteins; E=1e-18 PFAM: PF00165; Bacterial regulatory helix-turn-heli; E=8e-24; AraC family transcriptional regulator 1912413 1797119 RB3692 Rhodopirellula baltica SH 1 AraC family transcriptional regulator NP_865665.1 1911487 R 243090 CDS NP_865666.1 32472672 1796289 complement(1912410..1912649) 1 NC_005027.1 hypothetical protein 1912649 1796289 RB3693 Rhodopirellula baltica SH 1 hypothetical protein NP_865666.1 1912410 R 243090 CDS NP_865667.1 32472673 1796253 complement(1912676..1913521) 1 NC_005027.1 PMID: 9143122 best DB hits: BLAST: swissprot:O05691; THCF_RHOER NON-HEME HALOPEROXIDASE ----- gb:; E=1e-113 swissprot:P25026; PRXC_PSEPY NON-HEME CHLOROPEROXIDASE (CHLORIDE; E=1e-111 pir:G83304; chloroperoxidase precursor PA2717 [imported] -; E=1e-106 COG: PA2717; COG0596 Predicted hydrolases or acyltransferases (alpha/beta; E=1e-107 slr0314; COG0596 Predicted hydrolases or acyltransferases; E=4e-49 AF0865; COG0596 Predicted hydrolases or acyltransferases (alpha/beta; E=3e-12 PFAM: PF02230; Phospholipase/Carboxylesterase; E=0.035 PF00561; alpha/beta hydrolase fold; E=3.5e-40; non-heme chloroperoxidase 1913521 1796253 RB3694 Rhodopirellula baltica SH 1 non-heme chloroperoxidase NP_865667.1 1912676 R 243090 CDS NP_865668.1 32472674 1795613 1913487..1913618 1 NC_005027.1 hypothetical protein 1913618 1795613 RB3695 Rhodopirellula baltica SH 1 hypothetical protein NP_865668.1 1913487 D 243090 CDS NP_865669.1 32472675 1791186 complement(1913742..1914149) 1 NC_005027.1 PMID: 10567266; signal peptide 1914149 1791186 RB3696 Rhodopirellula baltica SH 1 signal peptide NP_865669.1 1913742 R 243090 CDS NP_865670.1 32472676 1791816 1914197..1914445 1 NC_005027.1 hypothetical protein 1914445 1791816 RB3697 Rhodopirellula baltica SH 1 hypothetical protein NP_865670.1 1914197 D 243090 CDS NP_865671.1 32472677 1791622 complement(1914515..1914778) 1 NC_005027.1 PMID: 11759840 best DB hits: BLAST: embl:CAA74280.1; (Y13942) GTN Reductase [Agrobacterium; E=1e-14 pir:C82391; N-ethylmaleimide reductase VCA0993 [imported] - Vibrio; E=2e-14 gb:AAD16106.1; (AF093246) NAD(P)H-dependent 2-cyclohexen-1-one; E=2e-13 COG: VCA0993; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme; E=2e-15 nemA; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family; E=4e-10 YPL171c; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme; E=7e-10 PFAM: PF00724; NADH:flavin oxidoreductase / NAD; E=3.3e-21; hypothetical protein 1914778 1791622 RB3698 Rhodopirellula baltica SH 1 hypothetical protein NP_865671.1 1914515 R 243090 CDS NP_865672.1 32472678 1789940 complement(1914854..1915327) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:D83102; xenobiotic reductase PA4356 [imported] - Pseudomonas; E=1e-33 gb:AAD16106.1; (AF093246) NAD(P)H-dependent 2-cyclohexen-1-one; E=6e-32 ddbj:BAA88211.1; (AB025798) NAD(P)H-dependent 2-cyclohexen-1-one; E=1e-31 COG: PA4356; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme; E=1e-34 nemA; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family; E=1e-27 VCA0998; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme; E=8e-26 PFAM: PF00724; NADH:flavin oxidoreductase / NAD; E=2e-38; hypothetical protein 1915327 1789940 RB3700 Rhodopirellula baltica SH 1 hypothetical protein NP_865672.1 1914854 R 243090 CDS NP_865673.1 32472679 1795602 1915292..1915474 1 NC_005027.1 hypothetical protein 1915474 1795602 RB3701 Rhodopirellula baltica SH 1 hypothetical protein NP_865673.1 1915292 D 243090 CDS NP_865674.1 32472680 1791145 1915478..1915789 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:D75588; transcriptional regulator, HTH_1 family - Deinococcus; E=1e-15 swissprot:Q04778; ALSR_BACSU ALS OPERON REGULATORY PROTEIN -----; E=3e-15 pir:A83017; probable transcriptional regulator PA5029 [imported] -; E=6e-15 COG: DRA0336; COG0583 Transcriptional regulator; E=1e-16 PFAM: PF00126; Bacterial regulatory helix-turn-heli; E=1.7e-25; transcriptional regulator 1915789 1791145 RB3702 Rhodopirellula baltica SH 1 transcriptional regulator NP_865674.1 1915478 D 243090 CDS NP_865675.1 32472681 1794047 1915847..1916425 1 NC_005027.1 PMID: 10496884 best DB hits: BLAST: gb:AAD54118.1; AF134978_1 (AF134978) transcriptional; E=1e-10 pir:T47029; hypothetical protein [imported] - Yersinia pestis; E=3e-10 gb:AAC79916.1; (U93090) LysR-type regulatory protein [Comamonas; E=1e-08 COG: PA5029; COG0583 Transcriptional regulator; E=1e-07; transcriptional regulator 1916425 1794047 RB3703 Rhodopirellula baltica SH 1 transcriptional regulator NP_865675.1 1915847 D 243090 CDS NP_865676.1 32472682 1793339 1916890..1917948 1 NC_005027.1 PMID: 7542800 best DB hits: BLAST: swissprot:P44550; APBE_HAEIN THIAMINE BIOSYNTHESIS LIPOPROTEIN; E=2e-24 pir:D72239; conserved hypothetical protein - Thermotoga maritima; E=7e-24 gb:AAK03418.1; (AE006171) ApbE [Pasteurella multocida]; E=4e-23 COG: HI0172; COG1477 Membrane-associated lipoprotein involved in thiamine; E=2e-25 NMB0563; COG1477 Membrane-associated lipoprotein involved in; E=6e-22 XF0594; COG1477 Membrane-associated lipoprotein involved in thiamine; E=2e-20 PFAM: PF02424; ApbE family; E=3.5e-52; thiamine biosynthesis lipoprotein apbE [precursor] 1917948 apbE 1793339 apbE Rhodopirellula baltica SH 1 thiamine biosynthesis lipoprotein apbE [precursor] NP_865676.1 1916890 D 243090 CDS NP_865677.1 32472683 1797112 1918042..1918668 1 NC_005027.1 hypothetical protein 1918668 1797112 RB3707 Rhodopirellula baltica SH 1 hypothetical protein NP_865677.1 1918042 D 243090 CDS NP_865678.1 32472684 1797121 1918712..1920718 1 NC_005027.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase 1920718 speA 1797121 speA Rhodopirellula baltica SH 1 arginine decarboxylase NP_865678.1 1918712 D 243090 CDS NP_865679.1 32472685 1796825 1920808..1922382 1 NC_005027.1 PMID: 10484179 best DB hits: BLAST: ddbj:BAB04808.1; (AP001510) BH1089~unknown conserved protein; E=1e-160 swissprot:P54608; YHCX_BACSU HYPOTHETICAL 60.2 KD PROTEIN IN; E=1e-156 pir:JC4601; hypothetical 48.2k protein - Sphingomonas yanoikuyae; E=5e-76 COG: BH1089_2; COG0388 Predicted amidohydrolase; E=1e-101 BH1089_1; COG0454 Histone acetyltransferase HPA2 and related; E=5e-52 DR2433; COG0388 Predicted amidohydrolase; E=7e-26 PFAM: PF00583; Acetyltransferase (GNAT) family; E=0.0021 PF00795; Carbon-nitrogen hydrolase; E=1.3e-32; hypothetical protein 1922382 1796825 RB3710 Rhodopirellula baltica SH 1 hypothetical protein NP_865679.1 1920808 D 243090 CDS NP_865680.1 32472686 1797005 complement(1922334..1922480) 1 NC_005027.1 hypothetical protein 1922480 1797005 RB3711 Rhodopirellula baltica SH 1 hypothetical protein NP_865680.1 1922334 R 243090 CDS NP_865681.1 32472687 1795585 complement(1922549..1923307) 1 NC_005027.1 signal peptide 1923307 1795585 RB3713 Rhodopirellula baltica SH 1 signal peptide NP_865681.1 1922549 R 243090 CDS NP_865682.1 32472688 1790950 complement(1923477..1924871) 1 NC_005027.1 PMID: 10484179 best DB hits: BLAST: ddbj:BAB06601.1; (AP001517) 3-oxoacyl-(acyl-carrier protein); E=4e-12 pir:G69842; 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); E=5e-11 pir:C72335; 3-oxoacyl-(acyl carrier protein) synthase II -; E=6e-10 COG: BH2882; COG0304 3-oxoacyl-(acyl-carrier-protein) synthase I; E=4e-13 PFAM: PF00109; Beta-ketoacyl synthase, N-ter; E=0.00032 PF02801; Beta-ketoacyl synthase, C-ter; E=1.2e-08; 3-oxoacyl-ACP synthase 1924871 fabB 1790950 fabB Rhodopirellula baltica SH 1 3-oxoacyl-ACP synthase NP_865682.1 1923477 R 243090 CDS NP_865683.1 32472689 1795937 complement(1924959..1925378) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:G83495; hypothetical protein PA1203 [imported] - Pseudomonas; E=2e-05 embl:CAC04241.1; (AL391515) hypothetical protein SC4B10.36c; E=0.001 embl:CAB87336.1; (AL163672) hypothetical protein SCE50.14c; E=0.006 COG: PA1203; COG1765 Uncharacterized ACR; E=2e-06; hypothetical protein 1925378 1795937 RB3716 Rhodopirellula baltica SH 1 hypothetical protein NP_865683.1 1924959 R 243090 CDS NP_865684.1 32472690 1792445 complement(1925507..1927114) 1 NC_005027.1 best DB hits: BLAST: pir:T27128; hypothetical protein Y53C12A.2 - Caenorhabditis elegans; E=0.79; signal peptide 1927114 1792445 RB3718 Rhodopirellula baltica SH 1 signal peptide NP_865684.1 1925507 R 243090 CDS NP_865685.1 32472691 1796710 complement(1927075..1927500) 1 NC_005027.1 hypothetical protein 1927500 1796710 RB3719 Rhodopirellula baltica SH 1 hypothetical protein NP_865685.1 1927075 R 243090 CDS NP_865686.1 32472692 1791543 complement(1927424..1927942) 1 NC_005027.1 hypothetical protein 1927942 1791543 RB3723 Rhodopirellula baltica SH 1 hypothetical protein NP_865686.1 1927424 R 243090 CDS NP_865687.1 32472693 1795356 1927875..1928942 1 NC_005027.1 PMID: 11466270 best DB hits: BLAST: gb:AAF20816.1; AF198628_2 (AF198628) RpoS [Xenorhabdus; E=7e-48 gb:AAG14981.1; AF242209_6 (AF242209) alternative sigma factor; E=3e-47 gb:AAG53883.1; AF275947_2 (AF275947) sigma factor RpoS; E=3e-47 COG: VC0534; COG0568 DNA-directed RNA polymerase sigma subunits; E=8e-48 PFAM: PF00140; Sigma-70 factor; E=1.3e-77; RNA polymerase sigma factor rpoS 1928942 rpoS 1795356 rpoS Rhodopirellula baltica SH 1 RNA polymerase sigma factor rpoS NP_865687.1 1927875 D 243090 CDS NP_865688.1 32472694 1791288 complement(1929020..1930213) 1 NC_005027.1 PMID: 9767151 best DB hits: BLAST: pir:A55541; heterocyst maturation protein devA - Anabaena sp.; E=4e-54 embl:CAA05977.1; (AJ003195) ATP-binding subunit [Anabaena; E=1e-53 pir:S76632; hypothetical protein - Synechocystis sp. (strain PCC; E=2e-49 COG: sll0484; COG1136 ABC-type (unclassified) transport system, ATPase; E=2e-50 PA2350; COG1135 Uncharacterized ABC-type transport system ATPase; E=6e-26 TM0352; COG1136 ABC-type (unclassified) transport system, ATPase; E=2e-25 PFAM: PF01583; Adenylylsulfate kinase; E=0.19 PF00005; ABC transporter; E=3.2e-50 PF00027; Cyclic nucleotide-binding domain; E=1.6e-20; ABC transporter ATP-binding protein 1930213 1791288 RB3729 Rhodopirellula baltica SH 1 ABC transporter ATP-binding protein NP_865688.1 1929020 R 243090 CDS NP_865689.1 32472695 1790030 1930294..1931586 1 NC_005027.1 PMID: 11759840 best DB hits: BLAST: pir:S76813; hypothetical protein sll1481 - Synechocystis sp. (strain; E=7e-07 embl:CAA59428.1; (X85107) alpha3a subunit of laminin 5 [Homo; E=0.040 embl:CAA59429.1; (X85108) alpha3b subunit of laminin 5 [Homo; E=0.040 COG: sll1481; COG0845 Membrane-fusion protein; E=6e-08 PFAM: PF00364; Biotin-requiring enzyme; E=0.26; hypothetical protein 1931586 1790030 RB3730 Rhodopirellula baltica SH 1 hypothetical protein NP_865689.1 1930294 D 243090 CDS NP_865690.1 32472696 1796182 1931583..1932827 1 NC_005027.1 best DB hits: BLAST: pir:S76812; hypothetical protein - Synechocystis sp. (strain PCC; E=3e-33 embl:CAA67986.1; (X99672) devC [Anabaena sp.]; E=3e-32 embl:CAA05976.1; (AJ003195) membrane spanning subunit [Anabaena; E=1e-31 PFAM: PF02687; Predicted permease; E=1.1e-09; hypothetical protein 1932827 1796182 RB3732 Rhodopirellula baltica SH 1 hypothetical protein NP_865690.1 1931583 D 243090 CDS NP_865691.1 32472697 1792364 complement(1932841..1933851) 1 NC_005027.1 PMID: 9174344 best DB hits: BLAST: pir:G82785; dTDP-glucose 4-6-dehydratase XF0611 [imported] - Xylella; E=1e-116 pir:S75550; dTDP-glucose 4-6-dehydratase - Synechocystis sp. (strain; E=1e-114 pir:T00419; dTDP-glucose 4-6-dehydratase homolog T30B22.4 -; E=1e-101 COG: XF0611; COG0451 Nucleoside-diphosphate-sugar epimerases; E=1e-117 MTH1789; COG1088 dTDP-D-glucose 4,6-dehydratase; E=2e-21 PA3554_2; COG0451 Nucleoside-diphosphate-sugar epimerases; E=3e-21 PFAM: PF01073; 3-beta hydroxysteroid dehydrogenase; E=0.0012 PF00106; short chain dehydrogenase; E=0.0069 PF01370; NAD dependent epimerase/dehydratase; E=3e-14; dTDP-glucose 4-6-dehydratase 1933851 1792364 RB3733 Rhodopirellula baltica SH 1 dTDP-glucose 4-6-dehydratase NP_865691.1 1932841 R 243090 CDS NP_865692.1 32472698 1795833 1933834..1933998 1 NC_005027.1 hypothetical protein 1933998 1795833 RB3734 Rhodopirellula baltica SH 1 hypothetical protein NP_865692.1 1933834 D 243090 CDS NP_865693.1 32472699 1796897 complement(1934121..1934972) 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: swissprot:O86953; PANC_THENE PANTOATE--BETA-ALANINE LIGASE; E=2e-61 swissprot:Q9X0G6; PANC_THEMA PANTOATE--BETA-ALANINE LIGASE; E=2e-60 gb:AAG61078.1; AF322013_197 (AF322013) ID912 [Bradyrhizobium; E=9e-58 COG: TM1077; COG0414 Pantoate-beta-alanine ligase; E=2e-61 PFAM: PF02569; Pantoate-beta-alanine ligase; E=5.1e-126; pantoate--beta-alanine ligase 1934972 panC 1796897 panC Rhodopirellula baltica SH 1 pantoate--beta-alanine ligase NP_865693.1 1934121 R 243090 CDS NP_865694.1 32472700 1792164 complement(1935052..1935471) 1 NC_005027.1 PMID: 9389475 best DB hits: BLAST: gb:AAB90131.1; (AE001027) conserved hypothetical protein; E=3e-15 pir:A70326; conserved hypothetical protein aq_283 - Aquifex aeolicus; E=4e-14 pir:S77403; conserved hypothetical protein sll1142 - Synechocystis; E=1e-12 COG: AF1107; COG1259 Uncharacterized ACR; E=3e-16 PFAM: PF02577; Uncharacterized ACR, COG1259; E=3.9e-26; hypothetical protein 1935471 1792164 RB3739 Rhodopirellula baltica SH 1 hypothetical protein NP_865694.1 1935052 R 243090 CDS NP_865695.1 32472701 1794541 complement(1935468..1935782) 1 NC_005027.1 hypothetical protein 1935782 1794541 RB3741 Rhodopirellula baltica SH 1 hypothetical protein NP_865695.1 1935468 R 243090 CDS NP_865696.1 32472702 1791079 1935693..1937849 1 NC_005027.1 PMID: 8752337 best DB hits: BLAST: pir:D72335; flagellin - Thermotoga maritima (strain MSB8) -----; E=4e-18 swissprot:P02968; FLA_BACSU FLAGELLIN ----- pir: FLBS68; E=6e-18 gb:AAC27808.1; (AF069392) polar flagellin [Vibrio; E=6e-18 COG: TM0758; COG1344 Flagellin and related hook-associated proteins; E=4e-19 PFAM: PF00669; Bacterial flagellin N-terminus; E=2.8e-27 PF00700; Bacterial flagellin C-terminus; E=2.1e-17; flagellin E 1937849 fliC 1791079 fliC Rhodopirellula baltica SH 1 flagellin E NP_865696.1 1935693 D 243090 CDS NP_865697.1 32472703 1792393 complement(1937999..1938292) 1 NC_005027.1 best DB hits: PFAM: PF02617; Uncharacterized ACR, COG2127; E=0.12; hypothetical protein 1938292 1792393 RB3744 Rhodopirellula baltica SH 1 hypothetical protein NP_865697.1 1937999 R 243090 CDS NP_865698.1 32472704 1795775 1938018..1938329 1 NC_005027.1 hypothetical protein 1938329 1795775 RB3745 Rhodopirellula baltica SH 1 hypothetical protein NP_865698.1 1938018 D 243090 CDS NP_865699.1 32472705 1794694 1938122..1938352 1 NC_005027.1 hypothetical protein 1938352 1794694 RB3746 Rhodopirellula baltica SH 1 hypothetical protein NP_865699.1 1938122 D 243090 CDS NP_865700.1 32472706 1796235 complement(1938177..1938407) 1 NC_005027.1 hypothetical protein 1938407 1796235 RB3747 Rhodopirellula baltica SH 1 hypothetical protein NP_865700.1 1938177 R 243090 CDS NP_865701.1 32472707 1796027 1938427..1938918 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: pir:F72286; flagellar protein FliS - Thermotoga maritima (strain; E=5e-05 COG: TM1179; COG1516 Flagellar protein; E=5e-06 PFAM: PF02561; Flagellar protein FliS; E=0.57; flagellar protein FliS 1938918 fliS 1796027 fliS Rhodopirellula baltica SH 1 flagellar protein FliS NP_865701.1 1938427 D 243090 CDS NP_865702.1 32472708 1792479 1938953..1940068 1 NC_005027.1 PMID: 9174344 best DB hits: BLAST: gb:AAB84886.1; (AE000823) UDP-glucose 4-epimerase homolog; E=4e-65 pir:C69149; conserved hypothetical protein MTH380 - Methanobacterium; E=4e-65 gb:AAG18703.1; (AE004975) GDP-D-mannose dehydratase; Gmd; E=9e-61 COG: MTH380; COG0451 Nucleoside-diphosphate-sugar epimerases; E=4e-66 aq_1069; COG1087 UDP-glucose 4-epimerase; E=1e-26 PFAM: PF00106; short chain dehydrogenase; E=0.0021 PF01073; 3-beta hydroxysteroid dehydrogenase; E=1.3e-07 PF01370; NAD dependent epimerase/dehydratase; E=3.7e-88; UDP-glucose 4-epimerase-like protein 1940068 1792479 RB3751 Rhodopirellula baltica SH 1 UDP-glucose 4-epimerase-like protein NP_865702.1 1938953 D 243090 CDS NP_865703.1 32472709 1792117 1940053..1940232 1 NC_005027.1 hypothetical protein 1940232 1792117 RB3753 Rhodopirellula baltica SH 1 hypothetical protein NP_865703.1 1940053 D 243090 CDS NP_865704.1 32472710 1790138 1940193..1941626 1 NC_005027.1 PMID: 8244397 PMID: 8325651 best DB hits: BLAST: gb:AAA16877.1; (L13329) iduronate-2-sulfatase [Homo sapiens]; E=2e-42 gb:AAB33747.1; iduronate-2-sulfatase, IDS {EC 3.1.6.13} [human,; E=1e-41 gb:AAA59192.1; (L04586) iduronate 2-sulfatase [Homo sapiens]; E=2e-40 COG: PA2333; COG3119 Arylsulfatase A and related enzymes; E=6e-37 yejM; COG3083 Predicted hydrolase of alkaline phosphatase; E=9e-07 BS_yfnI; COG1368 Phosphoglycerol transferase and related proteins,; E=3e-06 PFAM: PF00884; Sulfatase; E=4.9e-29; iduronate-2-sulfatase 1941626 1790138 RB3755 Rhodopirellula baltica SH 1 iduronate-2-sulfatase NP_865704.1 1940193 D 243090 CDS NP_865705.1 32472711 1796817 complement(1941623..1941730) 1 NC_005027.1 hypothetical protein 1941730 1796817 RB3758 Rhodopirellula baltica SH 1 hypothetical protein NP_865705.1 1941623 R 243090 CDS NP_865706.1 32472712 1796220 complement(1941894..1942169) 1 NC_005027.1 hypothetical protein 1942169 1796220 RB3760 Rhodopirellula baltica SH 1 hypothetical protein NP_865706.1 1941894 R 243090 CDS NP_865707.1 32472713 1791788 1942292..1943911 1 NC_005027.1 PMID: 9972265 best DB hits: BLAST: pir:G75337; glycerol kinase - Deinococcus radiodurans (strain R1); E=1e-169 pir:C72254; glycerol kinase - Thermotoga maritima (strain MSB8); E=1e-155 swissprot:Q9X1E4; GLK2_THEMA GLYCEROL KINASE 2 (ATP:GLYCEROL; E=1e-155 COG: DR1928; COG0554 Glycerol kinase; E=1e-170 PFAM: PF00370; FGGY family of carbohydrate kinases; E=3.8e-107 PF02782; FGGY family of carbohydrate kinases; E=6.7e-83; glycerol kinase 1943911 glpK 1791788 glpK Rhodopirellula baltica SH 1 glycerol kinase NP_865707.1 1942292 D 243090 CDS NP_865708.1 32472714 1795517 1943977..1945569 1 NC_005027.1 PMID: 7821823 best DB hits: BLAST: pir:C75448; glycerol-3-phosphate dehydrogenase - Deinococcus; E=1e-112 pir:C70130; glycerol-3-phosphate dehydrogenase, anaerobic (glpA); E=4e-83 gb:AAF02807.1; AC009400_3 (AC009400) glycerol-3-phosphate; E=2e-82 COG: DR1019; COG0578 Glycerol-3-phosphate dehydrogenase; E=1e-113 PFAM: PF02737; 3-hydroxyacyl-CoA dehydrogenase; E=0.61 PF00070; Pyridine nucleotide-disulphide; E=0.036 PF02032; Phytoene dehydrogenase related; E=0.11; glycerol-3-phosphate dehydrogenase 1945569 glpA 1795517 glpA Rhodopirellula baltica SH 1 glycerol-3-phosphate dehydrogenase NP_865708.1 1943977 D 243090 CDS NP_865709.1 32472715 1793635 complement(1945643..1946725) 1 NC_005027.1 PMID: 11259647; signal peptide 1946725 1793635 RB3764 Rhodopirellula baltica SH 1 signal peptide NP_865709.1 1945643 R 243090 CDS NP_865710.1 32472716 1794474 complement(1946653..1946946) 1 NC_005027.1 hypothetical protein 1946946 1794474 RB3765 Rhodopirellula baltica SH 1 hypothetical protein NP_865710.1 1946653 R 243090 CDS NP_865711.1 32472717 1791392 1946949..1948043 1 NC_005027.1 PMID: 3110742 best DB hits: BLAST: pir:D75045; 3-isopropylmalate dehydrogenase (leub) PAB2424 -; E=2e-52 swissprot:O66607; LEU3_AQUAE 3-ISOPROPYLMALATE DEHYDROGENASE; E=6e-51 swissprot:Q9WZ26; LEU3_THEMA 3-ISOPROPYLMALATE DEHYDROGENASE; E=2e-49 COG: PAB2424; COG0473 Isocitrate/isopropylmalate dehydrogenase; E=2e-53 PFAM: PF00180; Isocitrate and isopropylmalate dehyd; E=6.3e-108 PF02376; CUT domain; E=0.32; 3-isopropylmalate dehydrogenase 1948043 leuB 1791392 leuB Rhodopirellula baltica SH 1 3-isopropylmalate dehydrogenase NP_865711.1 1946949 D 243090 CDS NP_865712.1 32472718 1796927 1948093..1949406 1 NC_005027.1 PMID: 10762278 PMID: 7704254 best DB hits: BLAST: swissprot:P42237; GUDP_BACSU PROBABLE GLUCARATE TRANSPORTER; E=2e-33 swissprot:Q46916; GUDP_ECOLI PROBABLE GLUCARATE TRANSPORTER; E=2e-33 gb:AAG57903.1; AE005507_4 (AE005507) transport protein; E=4e-33 COG: BS_ycbE; COG0477 Permeases of the major facilitator superfamily; E=2e-34 PA1569; COG2271 Sugar phosphate permease; E=7e-12 AF0907; COG0477 Permeases of the major facilitator superfamily; E=1e-11; glucarate transporter 1949406 1796927 RB3768 Rhodopirellula baltica SH 1 glucarate transporter NP_865712.1 1948093 D 243090 CDS NP_865713.1 32472719 1797045 1949403..1950452 1 NC_005027.1 PMID: 10484179 best DB hits: BLAST: ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=3e-19 swissprot:O05389; YRBE_BACSU HYPOTHETICAL 37.8 KDA PROTEIN IN; E=2e-17 pir:G72391; conserved hypothetical protein - Thermotoga maritima; E=9e-15 COG: BH1248; COG0673 Predicted dehydrogenases and related proteins; E=3e-20 PFAM: PF01408; Oxidoreductase, NAD-bi; E=1.5e-26; NADH-dependent dyhydrogenase 1950452 1797045 RB3770 Rhodopirellula baltica SH 1 NADH-dependent dyhydrogenase NP_865713.1 1949403 D 243090 CDS NP_865714.1 32472720 1790904 1950428..1951096 1 NC_005027.1 PMID: 9371463 best DB hits: BLAST: pir:B69206; conserved hypothetical protein MTH796 - Methanobacterium; E=1e-16 pir:S75497; hypothetical protein slr2121 - Synechocystis sp. (strain; E=6e-16 pir:D75064; hypothetical protein PAB0997 - Pyrococcus abyssi (strain; E=3e-12 COG: MTH796; COG1878 Uncharacterized ACR, predicted metal-dependent; E=1e-17; hypothetical protein 1951096 1790904 RB3771 Rhodopirellula baltica SH 1 hypothetical protein NP_865714.1 1950428 D 243090 CDS NP_865715.1 32472721 1792518 1951003..1951371 1 NC_005027.1 hypothetical protein 1951371 1792518 RB3772 Rhodopirellula baltica SH 1 hypothetical protein NP_865715.1 1951003 D 243090 CDS NP_865716.1 32472722 1796583 1951368..1952768 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S75596; hypothetical protein slr1342 - Synechocystis sp. (strain; E=2e-54 gb:AAF25989.1; AC013354_8 (AC013354) F15H18.21 [Arabidopsis; E=4e-54 gb:AAF78379.1; AC069551_12 (AC069551) T10O22.24 [Arabidopsis; E=1e-52 COG: slr1342; COG3395 Uncharacterized protein; E=2e-55; hypothetical protein 1952768 1796583 RB3773 Rhodopirellula baltica SH 1 hypothetical protein NP_865716.1 1951368 D 243090 CDS NP_865717.1 32472723 1796046 1952792..1953208 1 NC_005027.1 PMID: 10484179 best DB hits: BLAST: swissprot:P54540; YQJC_BACSU HYPOTHETICAL 15.7 KD PROTEIN IN; E=1e-15 ddbj:BAB05187.1; (AP001512) BH1468~unknown conserved protein; E=4e-15 pir:A71452; glyoxalase I related protein PH0272 [similarity] -; E=2e-13 COG: BS_yqjC; COG0346 Lactoylglutathione lyase; E=9e-17 PFAM: PF00903; Glyoxalase/Bleomycin resistance pr; E=3.7e-09; hypothetical protein 1953208 1796046 RB3774 Rhodopirellula baltica SH 1 hypothetical protein NP_865717.1 1952792 D 243090 CDS NP_865718.1 32472724 1792089 1953217..1953744 1 NC_005027.1 hypothetical protein 1953744 1792089 RB3775 Rhodopirellula baltica SH 1 hypothetical protein NP_865718.1 1953217 D 243090 CDS NP_865719.1 32472725 1795896 1953826..1954701 1 NC_005027.1 signal peptide 1954701 1795896 RB3777 Rhodopirellula baltica SH 1 signal peptide NP_865719.1 1953826 D 243090 CDS NP_865720.1 32472726 1792610 complement(1954717..1957809) 1 NC_005027.1 PMID: 10564511 best DB hits: BLAST: gb:AAD47812.1; (AF163841) histidine protein kinase; E=7e-40 pir:D82244; sensory box sensor histidine kinase VC1084 [imported] -; E=2e-38 pir:F83324; probable two-component sensor PA2571 [imported] -; E=2e-35 COG: VC1084; COG0642 Sensory transduction histidine kinases; E=2e-39 slr1759_2; COG2202 PAS/PAC domain; E=1e-18 BS_ykrQ_3; COG0642 Sensory transduction histidine kinases; E=1e-18 PFAM: PF00989; PAS domain; E=0.0067 PF00785; PAC motif; E=3.7e-09 PF00989; PAS domain; E=0.17; histidine protein kinase 1957809 1792610 RB3779 Rhodopirellula baltica SH 1 histidine protein kinase NP_865720.1 1954717 R 243090 CDS NP_865721.1 32472727 1797128 complement(1957694..1957876) 1 NC_005027.1 hypothetical protein 1957876 1797128 RB3783 Rhodopirellula baltica SH 1 hypothetical protein NP_865721.1 1957694 R 243090 CDS NP_865722.1 32472728 1791057 complement(1957869..1958324) 1 NC_005027.1 PMID: 10952301 best DB hits: BLAST: pir:F82244; response regulator VC1086 [imported] - Vibrio cholerae; E=2e-13 ddbj:BAA14000.1; (D89625) adenylate cyclase [Anabaena sp.]; E=1e-12 pir:G82244; response regulator VC1087 [imported] - Vibrio cholerae; E=1e-11 COG: VC1087_1; COG0784 CheY-like receiver domains; E=1e-12 PA2881; COG2204 AAA superfamily ATPases with N-terminal receiver; E=2e-10 Rv0981; COG0745 Response regulators consisting of a CheY-like; E=5e-09 PFAM: PF00072; Response regulator receiver doma; E=5.1e-17; response regulator 1958324 1791057 RB3784 Rhodopirellula baltica SH 1 response regulator NP_865722.1 1957869 R 243090 CDS NP_865723.1 32472729 1795537 complement(1958691..1961354) 1 NC_005027.1 hypothetical protein 1961354 1795537 RB3786 Rhodopirellula baltica SH 1 hypothetical protein NP_865723.1 1958691 R 243090 CDS NP_865724.1 32472730 1791812 complement(1961326..1962402) 1 NC_005027.1 PMID: 9767592 PMID: 10567266 best DB hits: BLAST: swissprot:P22040; Y415_SYNY3 HYPOTHETICAL ABC TRANSPORTER; E=3e-49 gb:AAC36155.1; (AF003632) PilH [Myxococcus xanthus]; E=2e-47 pir:H75288; ABC transporter ATP-binding protein - Deinococcus; E=5e-47 COG: sll0415; COG1131 ABC-type multidrug transport system, ATPase; E=2e-50 BH1054_2; COG0842 Permease component of an ABC-transporter; E=1e-33 PH0820; COG1131 ABC-type multidrug transport system, ATPase; E=3e-33 PFAM: PF02223; Thymidylate kinase; E=0.7 PF00005; ABC transporter; E=1.1e-46; ABC transporter ATP-binding protein 1962402 1791812 RB3788 Rhodopirellula baltica SH 1 ABC transporter ATP-binding protein NP_865724.1 1961326 R 243090 CDS NP_865725.1 32472731 1793827 complement(1962399..1962878) 1 NC_005027.1 hypothetical protein 1962878 1793827 RB3789 Rhodopirellula baltica SH 1 hypothetical protein NP_865725.1 1962399 R 243090 CDS NP_865726.1 32472732 1794340 1962900..1963154 1 NC_005027.1 hypothetical protein 1963154 1794340 RB3790 Rhodopirellula baltica SH 1 hypothetical protein NP_865726.1 1962900 D 243090 CDS NP_865727.1 32472733 1791945 1963269..1964405 1 NC_005027.1 PMID: 11157922 PMID: 10360571 best DB hits: BLAST: pir:C72228; sensor histidine kinase HpkA - Thermotoga maritima; E=1e-16 swissprot:P23545; PHOR_BACSU ALKALINE PHOSPHATASE SYNTHESIS SENSOR; E=2e-16 gb:AAF70313.1; AF260326_2 (AF260326) SrrB [Staphylococcus aureus]; E=3e-16 COG: TM1654_2; COG0642 Sensory transduction histidine kinases; E=1e-17 PFAM: PF00512; His Kinase A (phosphoacceptor) doma; E=1.8e-16 PF02518; Histidine kinase-, DNA gyrase B-, p; E=2e-27; sensor histidine kinase 1964405 1791945 RB3792 Rhodopirellula baltica SH 1 sensor histidine kinase NP_865727.1 1963269 D 243090 CDS NP_865728.1 32472734 1797078 1964622..1968860 1 NC_005027.1 PMID: 9252185 best DB hits: BLAST: pir:B64528; conserved hypothetical ATP-binding protein HP0066 -; E=2e-31 pir:A71979; hypothetical protein jhp0061 - Helicobacter pylori (strain; E=6e-31 ddbj:BAA33499.1; (AB003309) cdrA [Helicobacter pylori]; E=9e-29 COG: HP0066; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related; E=2e-32 PFAM: PF00005; ABC transporter; E=0.0065 PF00004; ATPase associated with; E=0.24 PF01580; FtsK/SpoIIIE family; E=9.4e-24; ATP-binding protein 1968860 1797078 RB3794 Rhodopirellula baltica SH 1 ATP-binding protein NP_865728.1 1964622 D 243090 CDS NP_865729.1 32472735 1794570 1968891..1969253 1 NC_005027.1 hypothetical protein 1969253 1794570 RB3800 Rhodopirellula baltica SH 1 hypothetical protein NP_865729.1 1968891 D 243090 CDS NP_865730.1 32472736 1794956 complement(1969262..1969456) 1 NC_005027.1 hypothetical protein 1969456 1794956 RB3802 Rhodopirellula baltica SH 1 hypothetical protein NP_865730.1 1969262 R 243090 CDS NP_865731.1 32472737 1792860 1969437..1973225 1 NC_005027.1 signal peptide 1973225 1792860 RB3804 Rhodopirellula baltica SH 1 signal peptide NP_865731.1 1969437 D 243090 CDS NP_865732.1 32472738 1790686 1973057..1974532 1 NC_005027.1 hypothetical protein 1974532 1790686 RB3808 Rhodopirellula baltica SH 1 hypothetical protein NP_865732.1 1973057 D 243090 CDS NP_865733.1 32472739 1795436 complement(1974492..1974647) 1 NC_005027.1 hypothetical protein 1974647 1795436 RB3809 Rhodopirellula baltica SH 1 hypothetical protein NP_865733.1 1974492 R 243090 CDS NP_865734.1 32472740 1790585 complement(1974664..1975230) 1 NC_005027.1 hypothetical protein 1975230 1790585 RB3810 Rhodopirellula baltica SH 1 hypothetical protein NP_865734.1 1974664 R 243090 CDS NP_865735.1 32472741 1794024 1975188..1975415 1 NC_005027.1 hypothetical protein 1975415 1794024 RB3813 Rhodopirellula baltica SH 1 hypothetical protein NP_865735.1 1975188 D 243090 CDS NP_865736.1 32472742 1791858 1975337..1975558 1 NC_005027.1 hypothetical protein 1975558 1791858 RB3814 Rhodopirellula baltica SH 1 hypothetical protein NP_865736.1 1975337 D 243090 CDS NP_865737.1 32472743 1795482 1975685..1976740 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB58305.1; (AL121854) hypothetical protein SCJ33.06c; E=1e-07 gb:AAF87158.1; AC002423_23 (AC002423) T23E23.6 [Arabidopsis; E=7e-05 gb:AAF87138.1; AC002423_3 (AC002423) T23E23.5 [Arabidopsis; E=5e-04 PFAM: PF01436; NHL repeat; E=0.094; hypothetical protein 1976740 1795482 RB3815 Rhodopirellula baltica SH 1 hypothetical protein NP_865737.1 1975685 D 243090 CDS NP_865738.1 32472744 1795884 1976747..1977658 1 NC_005027.1 PMID: 2647728 best DB hits: BLAST: pir:T08967; hypothetical protein F19B15.150 - Arabidopsis thaliana; E=3e-78 swissprot:O34948; YKWC_BACSU HYPOTHETICAL 30.7 KD PROTEIN IN; E=8e-71 gb:AAK06313.1; AE006450_6 (AE006450) 3-hydroxyisobutyrate; E=6e-70 COG: BS_ykwC; COG2084 3-hydroxyisobutyrate dehydrogenase and related; E=7e-72; 3-hydroxyisobutyrate dehydrogenase 1977658 1795884 RB3816 Rhodopirellula baltica SH 1 3-hydroxyisobutyrate dehydrogenase NP_865738.1 1976747 D 243090 CDS NP_865739.1 32472745 1796004 complement(1977722..1979134) 1 NC_005027.1 PMID: 10352233 PMID: 8636017 best DB hits: BLAST: pir:A83203; alginate o-acetyltransferase AlgI PA3548 [imported] -; E=3e-71 gb:AAB09781.1; (U50202) AlgI [Pseudomonas aeruginosa]; E=1e-70 gb:AAC04568.1; (AF027499) AlgI [Azotobacter vinelandii]; E=3e-69 COG: PA3548; COG1696 Predicted membrane protein involved in D-alanine; E=3e-72; alginate o-acetyltransferase algI 1979134 1796004 RB3817 Rhodopirellula baltica SH 1 alginate o-acetyltransferase algI NP_865739.1 1977722 R 243090 CDS NP_865740.1 32472746 1796155 complement(1979131..1980195) 1 NC_005027.1 signal peptide 1980195 1796155 RB3818 Rhodopirellula baltica SH 1 signal peptide NP_865740.1 1979131 R 243090 CDS NP_865741.1 32472747 1796992 complement(1980192..1981181) 1 NC_005027.1 PMID: 2830250 best DB hits: BLAST: pir:F71678; CDPdiacylglycerol--serine O-phosphatidyltransferase (EC; E=1e-12 pir:G82804; phosphatidyltransferase XF0442 [imported] - Xylella; E=2e-12 pir:T47268; phosphatidylserine synthase [imported] - Helicobacter; E=3e-12 COG: RP242; COG1183 Phosphatidylserine synthase; E=1e-13 Rv2612c; COG0558 Phosphatidylglycerophosphate synthase; E=1e-05 AF2044; COG1183 Phosphatidylserine synthase; E=1e-05 PFAM: PF01066; CDP-alcohol phosphatidyltrans; E=1.1e-08; CDP-diacylglycerol--serine O-phosphatidyltransferase 1981181 pss 1796992 pss Rhodopirellula baltica SH 1 CDP-diacylglycerol--serine O-phosphatidyltransferase NP_865741.1 1980192 R 243090 CDS NP_865742.2 161579034 1791922 complement(1981139..1981891) 1 NC_005027.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 1981891 psd 1791922 psd Rhodopirellula baltica SH 1 phosphatidylserine decarboxylase NP_865742.2 1981139 R 243090 CDS NP_865743.1 32472749 1793352 1982259..1983941 1 NC_005027.1 PMID: 2187483 best DB hits: BLAST: pir:T51421; L-aspartate oxidase-like protein - Arabidopsis thaliana; E=3e-91 pir:T36393; L-aspartate oxidase - Streptomyces coelicolor -----; E=5e-90 swissprot:Q51363; NADB_PSEAE L-ASPARTATE OXIDASE (QUINOLINATE; E=2e-86 COG: PA0761; COG0029 Aspartate oxidase; E=1e-87 Rv1552; COG1053 Succinate dehydrogenase/fumarate reductase,; E=4e-69 XF1924; COG0029 Aspartate oxidase; E=1e-68 PFAM: PF01134; Glucose inhibited division pro; E=0.2 PF01494; FAD binding domain; E=0.011 PF00732; GMC oxidoreductases; E=0.12; L-aspartate oxidase 1983941 nadB 1793352 nadB Rhodopirellula baltica SH 1 L-aspartate oxidase NP_865743.1 1982259 D 243090 CDS NP_865744.1 32472750 1790432 complement(1984011..1985525) 1 NC_005027.1 PMID: 1697017 PMID: 3017428 best DB hits: BLAST: swissprot:P05695; PORP_PSEAE PORIN P PRECURSOR (OUTER MEMBRANE; E=4e-16 pir:S11793; porin P precursor, phosphate-specific - Pseudomonas; E=5e-16 pir:D82740; polyphosphate-selective porin O XF0975 [imported] -; E=1e-11; porin 1985525 oprP 1790432 oprP Rhodopirellula baltica SH 1 porin NP_865744.1 1984011 R 243090 CDS NP_865745.1 32472751 1795995 1985536..1987938 1 NC_005027.1 hypothetical protein 1987938 1795995 RB3828 Rhodopirellula baltica SH 1 hypothetical protein NP_865745.1 1985536 D 243090 CDS NP_865746.1 32472752 1796371 1987949..1988593 1 NC_005027.1 PMID: 10780382 best DB hits: BLAST: ddbj:BAB16192.1; (AP002086) hypothetical protein [Agrobacterium; E=8e-23 embl:CAC14575.1; (AJ295059) arylesterase [Sinorhizobium; E=2e-20 gb:AAD02335.1; (AF044683) arylesterase [Agrobacterium; E=3e-18; hypothetical protein 1988593 1796371 RB3830 Rhodopirellula baltica SH 1 hypothetical protein NP_865746.1 1987949 D 243090 CDS NP_865747.1 32472753 1790273 complement(1988666..1988788) 1 NC_005027.1 hypothetical protein 1988788 1790273 RB3831 Rhodopirellula baltica SH 1 hypothetical protein NP_865747.1 1988666 R 243090 CDS NP_865748.1 32472754 1791545 complement(1988949..1989125) 1 NC_005027.1 hypothetical protein 1989125 1791545 RB3832 Rhodopirellula baltica SH 1 hypothetical protein NP_865748.1 1988949 R 243090 CDS NP_865749.1 32472755 1792019 1989195..1989662 1 NC_005027.1 hypothetical protein 1989662 1792019 RB3833 Rhodopirellula baltica SH 1 hypothetical protein NP_865749.1 1989195 D 243090 CDS NP_865750.1 32472756 1794639 1989687..1989839 1 NC_005027.1 hypothetical protein 1989839 1794639 RB3835 Rhodopirellula baltica SH 1 hypothetical protein NP_865750.1 1989687 D 243090 CDS NP_865751.1 32472757 1790926 1989848..1990474 1 NC_005027.1 signal peptide 1990474 1790926 RB3836 Rhodopirellula baltica SH 1 signal peptide NP_865751.1 1989848 D 243090 CDS NP_865752.1 32472758 1796772 1990530..1990835 1 NC_005027.1 signal peptide 1990835 1796772 RB3838 Rhodopirellula baltica SH 1 signal peptide NP_865752.1 1990530 D 243090 CDS NP_865753.1 32472759 1791331 1990986..1991492 1 NC_005027.1 PMID: 9168618 best DB hits: PFAM: PF00903; Glyoxalase/Bleomycin resistance pr; E=5.3e-10; dioxygenase superfamily protein 1991492 1791331 RB3840 Rhodopirellula baltica SH 1 dioxygenase superfamily protein NP_865753.1 1990986 D 243090 CDS NP_865754.1 32472760 1794041 1991467..1991607 1 NC_005027.1 hypothetical protein 1991607 1794041 RB3841 Rhodopirellula baltica SH 1 hypothetical protein NP_865754.1 1991467 D 243090 CDS NP_865755.1 32472761 1791639 complement(1991615..1993741) 1 NC_005027.1 PMID: 9524216 PMID: 95147689 best DB hits: BLAST: gb:AAC46184.1; (AF026511) dipeptidyl peptidase IV [Porphyromonas; E=2e-59 ddbj:BAA28265.1; (AB008194) DPP IV [Porphyromonas gingivalis]; E=5e-59 pir:S66261; X-Pro dipeptidyl-peptidase (EC 3.4.14.11) -; E=5e-48 COG: YHR028c; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; E=8e-26 PFAM: PF00930; Dipeptidyl peptidase IV (DPP IV); E=7.9e-29 PF00326; Prolyl oligopeptidase; E=0.39; dipeptidyl peptidase IV 1993741 1791639 RB3842 Rhodopirellula baltica SH 1 dipeptidyl peptidase IV NP_865755.1 1991615 R 243090 CDS NP_865756.1 32472762 1795851 1993863..1993979 1 NC_005027.1 hypothetical protein 1993979 1795851 RB3845 Rhodopirellula baltica SH 1 hypothetical protein NP_865756.1 1993863 D 243090 CDS NP_865757.1 32472763 1792984 1994029..1994148 1 NC_005027.1 hypothetical protein 1994148 1792984 RB3846 Rhodopirellula baltica SH 1 hypothetical protein NP_865757.1 1994029 D 243090 CDS NP_865758.1 32472764 1790204 complement(1994141..1994263) 1 NC_005027.1 hypothetical protein 1994263 1790204 RB3847 Rhodopirellula baltica SH 1 hypothetical protein NP_865758.1 1994141 R 243090 CDS NP_865759.1 32472765 1796128 complement(1994257..1994538) 1 NC_005027.1 hypothetical protein 1994538 1796128 RB3848 Rhodopirellula baltica SH 1 hypothetical protein NP_865759.1 1994257 R 243090 CDS NP_865760.1 32472766 1791139 1994427..1996340 1 NC_005027.1 PMID: 10336424 best DB hits: BLAST: pir:E64903; arylsulfatase homolog b1498 - Escherichia coli -----; E=1e-26 swissprot:P77318; YDEN_ECOLI SULFATASE YDEN PRECURSOR; E=1e-26 gb:AAF30402.1; AF109924_1 (AF109924) sulfatase 1 precursor [Helix; E=1e-26 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=1e-27 PFAM: PF00884; Sulfatase; E=1.2e-31; Aryl-sulphate sulphohydrolase 1996340 1791139 RB3849 Rhodopirellula baltica SH 1 Aryl-sulphate sulphohydrolase NP_865760.1 1994427 D 243090 CDS NP_865761.1 32472767 1789993 complement(1996433..1996660) 1 NC_005027.1 hypothetical protein 1996660 1789993 RB3851 Rhodopirellula baltica SH 1 hypothetical protein NP_865761.1 1996433 R 243090 CDS NP_865762.1 32472768 1791341 1996680..1997117 1 NC_005027.1 PMID: 10952301 best DB hits: BLAST: pir:D82278; hypothetical protein VC0802 [imported] - Vibrio cholerae; E=2e-24 pir:C83100; hypothetical protein PA4364 [imported] - Pseudomonas; E=3e-15; hypothetical protein 1997117 1791341 RB3854 Rhodopirellula baltica SH 1 hypothetical protein NP_865762.1 1996680 D 243090 CDS NP_865763.1 32472769 1794009 1997265..1997840 1 NC_005027.1 hypothetical protein 1997840 1794009 RB3856 Rhodopirellula baltica SH 1 hypothetical protein NP_865763.1 1997265 D 243090 CDS NP_865764.1 32472770 1790259 complement(1997834..1998016) 1 NC_005027.1 hypothetical protein 1998016 1790259 RB3858 Rhodopirellula baltica SH 1 hypothetical protein NP_865764.1 1997834 R 243090 CDS NP_865765.1 32472771 1796630 1998008..1998445 1 NC_005027.1 hypothetical protein 1998445 1796630 RB3860 Rhodopirellula baltica SH 1 hypothetical protein NP_865765.1 1998008 D 243090 CDS NP_865766.1 32472772 1796181 1998657..1999049 1 NC_005027.1 hypothetical protein 1999049 1796181 RB3864 Rhodopirellula baltica SH 1 hypothetical protein NP_865766.1 1998657 D 243090 CDS NP_865767.1 32472773 1791919 1999065..1999601 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: ddbj:BAB04222.1; (AP001508) BH0503~unknown conserved protein in; E=1e-17 pir:G75479; hypothetical protein - Deinococcus radiodurans (strain; E=1e-15 pir:E82435; hypothetical protein VCA0631 [imported] - Vibrio; E=1e-11 COG: BH0503; COG0454 Histone acetyltransferase HPA2 and related; E=1e-18 PFAM: PF00583; Acetyltransferase (GNAT) family; E=3.9e-07; acetyltransferase 1999601 1791919 RB3865 Rhodopirellula baltica SH 1 acetyltransferase NP_865767.1 1999065 D 243090 CDS NP_865768.1 32472774 1793776 complement(1999696..2000493) 1 NC_005027.1 hypothetical protein 2000493 1793776 RB3866 Rhodopirellula baltica SH 1 hypothetical protein NP_865768.1 1999696 R 243090 CDS NP_865769.1 32472775 1791572 2000435..2001289 1 NC_005027.1 best DB hits: BLAST: pir:F75494; hypothetical protein - Deinococcus radiodurans (strain; E=0.55 PFAM: PF01260; AP endonuclease 1; E=0.41; signal peptide 2001289 1791572 RB3867 Rhodopirellula baltica SH 1 signal peptide NP_865769.1 2000435 D 243090 CDS NP_865770.1 32472776 1790772 complement(2001286..2001663) 1 NC_005027.1 hypothetical protein 2001663 1790772 RB3868 Rhodopirellula baltica SH 1 hypothetical protein NP_865770.1 2001286 R 243090 CDS NP_865771.1 32472777 1791666 complement(2001345..2001644) 1 NC_005027.1 hypothetical protein 2001644 1791666 RB3870 Rhodopirellula baltica SH 1 hypothetical protein NP_865771.1 2001345 R 243090 CDS NP_865772.1 32472778 1793386 2001638..2002954 1 NC_005027.1 PMID: 10762236 best DB hits: BLAST: gb:AAD38020.1; AF148127_1 (AF148127) transposase [Porphyromonas; E=8e-13 ddbj:BAA83477.1; (AB009361) transposase [Porphyromonas; E=1e-12 ddbj:BAA92234.1; (AB031551) transposase [Bacillus subtilis]; E=3e-10 COG: BH0691; COG3385 Predicted transposase; E=2e-10 PFAM: PF01609; Transposase (IS4 family); E=6.2e-08; transposase 2002954 1793386 RB3871 Rhodopirellula baltica SH 1 transposase NP_865772.1 2001638 D 243090 CDS NP_865773.1 32472779 1793684 2002995..2003252 1 NC_005027.1 hypothetical protein 2003252 1793684 RB3873 Rhodopirellula baltica SH 1 hypothetical protein NP_865773.1 2002995 D 243090 CDS NP_865774.1 32472780 1797062 2003332..2004822 1 NC_005027.1 PMID: 7910580 PMID: 1572648 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=3e-38 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=3e-35 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=3e-35 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=8e-29 PFAM: PF00884; Sulfatase; E=3.2e-49; arylsulfatase 2004822 arsA 1797062 arsA Rhodopirellula baltica SH 1 arylsulfatase NP_865774.1 2003332 D 243090 CDS NP_865775.1 32472781 1795005 complement(2004910..2006460) 1 NC_005027.1 PMID: 2476654 PMID: 2303452 PMID: 89384447 best DB hits: BLAST: gb:AAF04318.1; (AF065159) arylsulfatase [Bradyrhizobium; E=2e-50 gb:AAG58993.1; AE005611_3 (AE005611) arylsulfatase [Escherichia; E=4e-32 swissprot:P25549; ASLA_ECOLI ARYLSULFATASE (ARYL-SULFATE; E=6e-32 COG: aslA; COG3119 Arylsulfatase A and related enzymes; E=5e-33 PFAM: PF00884; Sulfatase; E=6.1e-68; Aryl-sulfate sulphohydrolase 2006460 aslA 1795005 aslA Rhodopirellula baltica SH 1 Aryl-sulfate sulphohydrolase NP_865775.1 2004910 R 243090 CDS NP_865776.1 32472782 1790455 complement(2006705..2006953) 1 NC_005027.1 hypothetical protein 2006953 1790455 RB3880 Rhodopirellula baltica SH 1 hypothetical protein NP_865776.1 2006705 R 243090 CDS NP_865777.1 32472783 1794589 complement(2007036..2007194) 1 NC_005027.1 hypothetical protein 2007194 1794589 RB3881 Rhodopirellula baltica SH 1 hypothetical protein NP_865777.1 2007036 R 243090 CDS NP_865778.1 32472784 1795516 complement(2007217..2007369) 1 NC_005027.1 hypothetical protein 2007369 1795516 RB3882 Rhodopirellula baltica SH 1 hypothetical protein NP_865778.1 2007217 R 243090 CDS NP_865779.1 32472785 1791647 complement(2007344..2007682) 1 NC_005027.1 hypothetical protein 2007682 1791647 RB3883 Rhodopirellula baltica SH 1 hypothetical protein NP_865779.1 2007344 R 243090 CDS NP_865780.1 32472786 1797104 2007712..2008764 1 NC_005027.1 PMID: 10607910 best DB hits: BLAST: ddbj:BAB01794.1; (AB026654) contains similarity to uridylate; E=9e-63 swissprot:P74457; PYRH_SYNY3 URIDYLATE KINASE (UK) (URIDINE; E=2e-61 swissprot:O66929; PYRH_AQUAE URIDYLATE KINASE (UK) (URIDINE; E=7e-61 COG: sll0144; COG0528 Uridylate kinase; E=2e-62 PFAM: PF00696; Amino acid kinase; E=1.1e-50; uridylate kinase 2008764 pyrH 1797104 pyrH Rhodopirellula baltica SH 1 uridylate kinase NP_865780.1 2007712 D 243090 CDS NP_865781.1 32472787 1796647 2008765..2009367 1 NC_005027.1 PMID: 8183897 PMID: 8755892 best DB hits: BLAST: ddbj:BAB06143.1; (AP001515) ribosome recycling factor [Bacillus; E=1e-37 swissprot:P81101; RRF_BACSU RIBOSOME RECYCLING FACTOR (RIBOSOME; E=5e-36 swissprot:Q10794; RRF_MYCTU RIBOSOME RECYCLING FACTOR (RIBOSOME; E=5e-35 COG: BH2424; COG0233 Ribosome recycling factor; E=1e-38 PFAM: PF01765; Ribosome recycling factor; E=2.5e-74; ribosome recycling factor 2009367 FRR 1796647 FRR Rhodopirellula baltica SH 1 ribosome recycling factor NP_865781.1 2008765 D 243090 CDS NP_865782.1 32472788 1790377 2009374..2011059 1 NC_005027.1 hypothetical protein 2011059 1790377 RB3888 Rhodopirellula baltica SH 1 hypothetical protein NP_865782.1 2009374 D 243090 CDS NP_865783.1 32472789 1792805 complement(2011177..2011554) 1 NC_005027.1 hypothetical protein 2011554 1792805 RB3890 Rhodopirellula baltica SH 1 hypothetical protein NP_865783.1 2011177 R 243090 CDS NP_865784.1 32472790 1792415 complement(2011605..2012435) 1 NC_005027.1 PMID: 6296787 best DB hits: BLAST: swissprot:Q04708; PROC_PEA PYRROLINE-5-CARBOXYLATE REDUCTASE; E=4e-49 swissprot:P54904; PROC_ARATH PYRROLINE-5-CARBOXYLATE REDUCTASE; E=4e-49 swissprot:P17817; PROC_SOYBN PYRROLINE-5-CARBOXYLATE REDUCTASE; E=8e-48 COG: slr0661; COG0345 Pyrroline-5-carboxylate reductase; E=3e-45 PFAM: PF01089; Delta 1-pyrroline-5-carboxylate redu; E=6.5e-101; pyrroline-5-carboxylate reductase 2012435 proC 1792415 proC Rhodopirellula baltica SH 1 pyrroline-5-carboxylate reductase NP_865784.1 2011605 R 243090 CDS NP_865785.1 32472791 1797060 complement(2012479..2013987) 1 NC_005027.1 PMID: 11337471 best DB hits: BLAST: pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=1e-22 gb:AAK05985.1; AE006418_5 (AE006418) serinethreonine protein; E=1e-22 embl:CAA10713.1; (AJ132604) hypothetical protein [Lactococcus; E=2e-22 COG: BH2504_1; COG0515 Serine/threonine protein kinases; E=1e-21 PFAM: PF00069; Protein kinase domain; E=3.4e-39; serine/threonine protein kinase 2013987 1797060 RB3893 Rhodopirellula baltica SH 1 serine/threonine protein kinase NP_865785.1 2012479 R 243090 CDS NP_865786.1 32472792 1793737 complement(2013984..2015186) 1 NC_005027.1 PMID: 9125538 PMID: 1905979 best DB hits: BLAST: gb:AAB67969.1; (U77368) internalin [Listeria monocytogenes]; E=1e-28 embl:CAA07457.1; (AJ007319) internalin H [Listeria monocytogenes]; E=1e-28 embl:CAC20635.1; (AJ012385) internalin D [Listeria monocytogenes]; E=1e-28 PFAM: PF00560; Leucine Rich Repeat; E=0.24; internalin 2015186 inlE 1793737 inlE Rhodopirellula baltica SH 1 internalin NP_865786.1 2013984 R 243090 CDS NP_865787.1 32472793 1796946 complement(2015236..2015967) 1 NC_005027.1 PMID: 7909543 best DB hits: BLAST: swissprot:P42673; PCP_PSEFL PYRROLIDONE-CARBOXYLATE PEPTIDASE; E=3e-18 swissprot:O73944; PCP_PYRFU PYRROLIDONE-CARBOXYLATE PEPTIDASE; E=3e-18 pir:D75057; pyroglutamyl-peptidase I (EC 3.4.19.3) PAB1419; E=3e-17 COG: PAB1419; COG2039 Pyrrolidone-carboxylate peptidase (N-terminal; E=3e-18 PFAM: PF01470; Pyroglutamyl peptidase; E=1.9e-15; pyrrolidone-carboxylate peptidase 2015967 PCP 1796946 PCP Rhodopirellula baltica SH 1 pyrrolidone-carboxylate peptidase NP_865787.1 2015236 R 243090 CDS NP_865788.1 32472794 1789920 complement(2016038..2018047) 1 NC_005027.1 signal peptide 2018047 1789920 RB3899 Rhodopirellula baltica SH 1 signal peptide NP_865788.1 2016038 R 243090 CDS NP_865789.1 32472795 1791705 complement(2018093..2018329) 1 NC_005027.1 hypothetical protein 2018329 1791705 RB3902 Rhodopirellula baltica SH 1 hypothetical protein NP_865789.1 2018093 R 243090 CDS NP_865790.1 32472796 1791793 complement(2018399..2018581) 1 NC_005027.1 hypothetical protein 2018581 1791793 RB3904 Rhodopirellula baltica SH 1 hypothetical protein NP_865790.1 2018399 R 243090 CDS NP_865791.1 32472797 1796959 2018601..2018717 1 NC_005027.1 hypothetical protein 2018717 1796959 RB3905 Rhodopirellula baltica SH 1 hypothetical protein NP_865791.1 2018601 D 243090 CDS NP_865792.1 32472798 1791760 2018695..2019081 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S76180; hypothetical protein - Synechocystis sp. (strain PCC; E=1e-41 gb:AAD29263.1; AF107093_8 (AF107093) unknown [Rhodobacter; E=7e-32 pir:B70799; hypothetical protein Rv3745c - Mycobacterium; E=6e-12; hypothetical protein 2019081 1791760 RB3906 Rhodopirellula baltica SH 1 hypothetical protein NP_865792.1 2018695 D 243090 CDS NP_865793.1 32472799 1790683 complement(2019281..2019730) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:C75256; conserved hypothetical protein - Deinococcus radiodurans; E=3e-46 gb:AAG48795.1; AF332432_1 (AF332432) unknown protein [Arabidopsis; E=3e-40 pir:A82330; conserved hypothetical protein VC0373 [imported] -; E=4e-38 COG: DR2598; COG0432 Uncharacterized ACR; E=3e-47 PFAM: PF01894; Uncharacterised protein family UPF00; E=5.6e-43; hypothetical protein 2019730 1790683 RB3908 Rhodopirellula baltica SH 1 hypothetical protein NP_865793.1 2019281 R 243090 CDS NP_865794.1 32472800 1790283 complement(2019984..2020625) 1 NC_005027.1 hypothetical protein 2020625 1790283 RB3911 Rhodopirellula baltica SH 1 hypothetical protein NP_865794.1 2019984 R 243090 CDS NP_865795.1 32472801 1796821 2020731..2023433 1 NC_005027.1 PMID: 1317840 best DB hits: BLAST: pir:C75313; probable proteinase - Deinococcus radiodurans (strain; E=1e-136 pir:D69102; collagenase - Methanobacterium thermoautotrophicum; E=2e-58 pir:F64895; hypothetical protein b1435 - Escherichia coli -----; E=9e-53 COG: DR2130; COG0826 Protease related to collagenase; E=1e-137 PFAM: PF01045; EIAV glycoprotein, gp45; E=0.52 PF01136; Peptidase U32; E=1.9e-50 PF00452; Apoptosis regulator proteins, B; E=0.0056; collagenase 2023433 1796821 RB3913 Rhodopirellula baltica SH 1 collagenase NP_865795.1 2020731 D 243090 CDS NP_865796.1 32472802 1791894 complement(2023447..2024937) 1 NC_005027.1 PMID: 2119891 best DB hits: BLAST: embl:CAB77286.1; (AL160312) DNA polymerase related; E=9e-39 gb:AAD56917.1; AF180145_9 (AF180145) hypothetical protein; E=1e-30 embl:CAB56297.1; (AJ249385) hypothetical protein [Pseudomonas; E=3e-30 COG: aq_1693; COG1573 Uracil-DNA glycosylase; E=5e-21; DNA polymerase related protein 2024937 dpoL 1791894 dpoL Rhodopirellula baltica SH 1 DNA polymerase related protein NP_865796.1 2023447 R 243090 CDS NP_865797.1 32472803 1791368 complement(2024956..2026728) 1 NC_005027.1 hypothetical protein 2026728 1791368 RB3916 Rhodopirellula baltica SH 1 hypothetical protein NP_865797.1 2024956 R 243090 CDS NP_865798.1 32472804 1792332 complement(2026822..2026956) 1 NC_005027.1 hypothetical protein 2026956 1792332 RB3917 Rhodopirellula baltica SH 1 hypothetical protein NP_865798.1 2026822 R 243090 CDS NP_865799.1 32472805 1796686 2026982..2031835 1 NC_005027.1 PMID: 11481431 best DB hits: BLAST: pir:C75617; probable oxidoreductase - Deinococcus radiodurans; E=0.004 pir:F75417; L-sorbosone dehydrogenase - Deinococcus radiodurans; E=0.14 pir:S31940; starch-degrading enzyme - Clostridium acetobutylicum; E=0.67 COG: DRA0203; COG2133 Glucose/sorbosone dehydrogenases; E=4e-04 PFAM: PF00034; Cytochrome c; E=0.049; signal peptide 2031835 1796686 RB3919 Rhodopirellula baltica SH 1 signal peptide NP_865799.1 2026982 D 243090 CDS NP_865800.1 32472806 1797009 complement(2032156..2032302) 1 NC_005027.1 signal peptide 2032302 1797009 RB3922 Rhodopirellula baltica SH 1 signal peptide NP_865800.1 2032156 R 243090 CDS NP_865801.1 32472807 1796344 complement(2032286..2032453) 1 NC_005027.1 hypothetical protein 2032453 1796344 RB3923 Rhodopirellula baltica SH 1 hypothetical protein NP_865801.1 2032286 R 243090 CDS NP_865802.1 32472808 1795949 complement(2032450..2033421) 1 NC_005027.1 PMID: 9639930 best DB hits: BLAST: swissprot:P46218; Y31K_SULAC HYPOTHETICAL 31.5 KD PROTEIN -----; E=6e-06 swissprot:O34940; YVRE_BACSU HYPOTHETICAL 33.2 KD PROTEIN IN; E=7e-05 ddbj:BAA13046.1; (D86217) regucalcin [Mus musculus]; E=0.76 COG: BS_yvrE; COG3386 Uncharacterized protein; E=7e-06; hypothetical protein 2033421 1795949 RB3924 Rhodopirellula baltica SH 1 hypothetical protein NP_865802.1 2032450 R 243090 CDS NP_865803.1 32472809 1796824 complement(2033382..2033534) 1 NC_005027.1 hypothetical protein 2033534 1796824 RB3925 Rhodopirellula baltica SH 1 hypothetical protein NP_865803.1 2033382 R 243090 CDS NP_865804.1 32472810 1793719 complement(2033554..2033811) 1 NC_005027.1 hypothetical protein 2033811 1793719 RB3926 Rhodopirellula baltica SH 1 hypothetical protein NP_865804.1 2033554 R 243090 CDS NP_865805.1 32472811 1791783 2033789..2034310 1 NC_005027.1 hypothetical protein 2034310 1791783 RB3928 Rhodopirellula baltica SH 1 hypothetical protein NP_865805.1 2033789 D 243090 CDS NP_865806.1 32472812 1791600 complement(2034243..2034407) 1 NC_005027.1 hypothetical protein 2034407 1791600 RB3929 Rhodopirellula baltica SH 1 hypothetical protein NP_865806.1 2034243 R 243090 CDS NP_865807.1 32472813 1790581 complement(2034253..2034417) 1 NC_005027.1 hypothetical protein 2034417 1790581 RB3930 Rhodopirellula baltica SH 1 hypothetical protein NP_865807.1 2034253 R 243090 CDS NP_865808.1 32472814 1794759 2034427..2035200 1 NC_005027.1 PMID: 8331075 PMID: 10348868 PMID: 8921895 best DB hits: BLAST: pir:G83274; probable tolQ-type transport protein PA2983 [imported] -; E=7e-13 pir:H71686; tolQ protein (tolQ) RP309 - Rickettsia prowazekii; E=1e-10 pir:G82187; biopolymer transport protein ExbB-related protein VC1547; E=1e-10 COG: PA2983; COG0811 Biopolymer transport proteins; E=7e-14 PFAM: PF01618; MotA/TolQ/ExbB proton channel famil; E=4e-28; tolQ protein 2035200 tolQ 1794759 tolQ Rhodopirellula baltica SH 1 tolQ protein NP_865808.1 2034427 D 243090 CDS NP_865809.1 32472815 1790550 2035200..2035637 1 NC_005027.1 PMID: 11743194 best DB hits: BLAST: swissprot:P18784; EXBD_ECOLI BIOPOLYMER TRANSPORT EXBD PROTEIN; E=0.010 swissprot:Q05606; EXBD_PSEPU BIOPOLYMER TRANSPORT EXBD PROTEIN; E=0.35 embl:CAB50919.1; (AJ243354) hypothetical protein [Pseudomonas; E=0.35 COG: exbD; COG0848 Biopolymer transport protein; E=0.001; hypothetical protein 2035637 1790550 RB3933 Rhodopirellula baltica SH 1 hypothetical protein NP_865809.1 2035200 D 243090 CDS NP_865810.1 32472816 1796309 2035580..2036125 1 NC_005027.1 best DB hits: BLAST: swissprot:Q9ZHV9; EXD2_VIBCH BIOPOLYMER TRANSPORT EXBD2 PROTEIN; E=0.57 PFAM: PF02472; Biopolymer transport protein ExbD/To; E=0.0017; hypothetical protein 2036125 1796309 RB3934 Rhodopirellula baltica SH 1 hypothetical protein NP_865810.1 2035580 D 243090 CDS NP_865811.1 32472817 1796005 complement(2036074..2036241) 1 NC_005027.1 hypothetical protein 2036241 1796005 RB3935 Rhodopirellula baltica SH 1 hypothetical protein NP_865811.1 2036074 R 243090 CDS NP_865812.1 32472818 1797120 2036289..2037023 1 NC_005027.1 PMID: 2656657 PMID: 6283099 PMID: 2404959 best DB hits: BLAST: pir:B82835; anthranilate synthase component II XF0211 [imported] -; E=4e-40 swissprot:P06193; PABA_SALTY PARA-AMINOBENZOATE SYNTHASE GLUTAMINE; E=4e-39 pir:NNPS2P; anthranilate synthase (EC 4.1.3.27) component II; E=6e-39 COG: XF0211; COG0512 Anthranilate/para-aminobenzoate synthases component; E=3e-41 TM0141_1; COG0512 Anthranilate/para-aminobenzoate synthases; E=7e-37 DR1766; COG0512 Anthranilate/para-aminobenzoate synthases component; E=3e-36 PFAM: PF00117; Glutamine amidotransferase clas; E=0.00015; anthranilate synthase component II 2037023 trpG 1797120 trpG Rhodopirellula baltica SH 1 anthranilate synthase component II NP_865812.1 2036289 D 243090 CDS NP_865813.1 32472819 1791730 2037020..2037607 1 NC_005027.1 best DB hits: PFAM: PF01522; Polysaccharide deacetylase; E=0.37; hypothetical protein 2037607 1791730 RB3938 Rhodopirellula baltica SH 1 hypothetical protein NP_865813.1 2037020 D 243090 CDS NP_865814.1 32472820 1791902 2037604..2038566 1 NC_005027.1 best DB hits: BLAST: gb:AAC27019.1; (AF032114) unknown [Methylobacterium extorquens]; E=2e-16 pir:B75078; hypothetical protein PAB1694 - Pyrococcus abyssi (strain; E=5e-16 pir:F71066; hypothetical protein PH1228 - Pyrococcus horikoshii; E=2e-15 COG: PAB1694; COG1907 Predicted archaeal sugar kinases; E=5e-17; hypothetical protein 2038566 1791902 RB3940 Rhodopirellula baltica SH 1 hypothetical protein NP_865814.1 2037604 D 243090 CDS NP_865815.1 32472821 1791743 complement(2038563..2039096) 1 NC_005027.1 PMID: 9321663 PMID: 8266080 PMID: 8265370 best DB hits: BLAST: gb:AAB02738.1; (U58864) CspR [Bacillus subtilis]; E=2e-29 swissprot:P32813; YGL3_BACST HYPOTHETICAL 18.2 KD PROTEIN IN GLDA; E=4e-29 pir:G69608; rRNA methylase homolog cspR - Bacillus subtilis -----; E=6e-29 COG: BS_cspR; COG0219 Predicted rRNA methylase (SpoU class); E=5e-30 slr1673; COG0566 rRNA methylases; E=6e-07 PFAM: PF00588; SpoU rRNA Methylase; E=8e-34; SpoU rRNA methylase 2039096 spoU 1791743 spoU Rhodopirellula baltica SH 1 SpoU rRNA methylase NP_865815.1 2038563 R 243090 CDS NP_865816.1 32472822 1794276 2039245..2040786 1 NC_005027.1 best DB hits: BLAST: embl:CAB94634.1; (AL359215) secreted glycosyl hydrolase.; E=9e-10 pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=5e-08 embl:CAB45032.1; (AL078635) large multi-functional; E=0.001; hypothetical protein 2040786 1794276 RB3944 Rhodopirellula baltica SH 1 hypothetical protein NP_865816.1 2039245 D 243090 CDS NP_865817.1 32472823 1796066 2040830..2042179 1 NC_005027.1 best DB hits: BLAST: pir:G83466; hypothetical protein PA1424 [imported] - Pseudomonas; E=1e-20 pir:C82132; conserved hypothetical protein VC1980 [imported] -; E=3e-18 gb:AAF54040.1; (AE003672) CG10050 gene product [Drosophila; E=3e-12 COG: PA1424; COG3148 Uncharacterized ACR; E=1e-21; hypothetical protein 2042179 1796066 RB3946 Rhodopirellula baltica SH 1 hypothetical protein NP_865817.1 2040830 D 243090 CDS NP_865818.1 32472824 1793100 2042289..2042528 1 NC_005027.1 hypothetical protein 2042528 1793100 RB3949 Rhodopirellula baltica SH 1 hypothetical protein NP_865818.1 2042289 D 243090 CDS NP_865819.1 32472825 1790368 2042479..2044623 1 NC_005027.1 PMID: 10831436 best DB hits: BLAST: gb:AAF76874.1; (AF246145) unknown [uncultured soil microbe; E=3e-08; hypothetical protein 2044623 1790368 RB3950 Rhodopirellula baltica SH 1 hypothetical protein NP_865819.1 2042479 D 243090 CDS NP_865820.1 32472826 1790222 complement(2044634..2046217) 1 NC_005027.1 best DB hits: BLAST: pir:T36423; probable large, multifunctional secreted protein -; E=1e-59 embl:CAB45032.1; (AL078635) large multi-functional; E=4e-53; large multi-functional protein 2046217 1790222 RB3951 Rhodopirellula baltica SH 1 large multi-functional protein NP_865820.1 2044634 R 243090 CDS NP_865821.1 32472827 1796307 complement(2046211..2048784) 1 NC_005027.1 PMID: 9923682 best DB hits: BLAST: pir:B71970; cytochrome oxidase (cbb3-type) - Helicobacter pylori; E=2e-04 pir:C64538; cytochrome-c oxidase (EC 1.9.3.1) chain fixP -; E=0.003 ddbj:BAA33529.1; (AB018105) cb-type cytochrome c oxidase subunit; E=0.009 COG: jhp0135; COG2010 Cytochrome c, mono- and diheme variants; E=2e-05 PFAM: PF00034; Cytochrome c; E=0.00073; cytochrome oxidase (cbb3-type) 2048784 1796307 RB3953 Rhodopirellula baltica SH 1 cytochrome oxidase (cbb3-type) NP_865821.1 2046211 R 243090 CDS NP_865822.1 32472828 1791590 complement(2048754..2050223) 1 NC_005027.1 PMID: 2303452 best DB hits: BLAST: pir:F70837; probable sulfatase (EC 3.1.6.-) atsG - Mycobacterium; E=8e-35 gb:AAF55607.1; (AE003724) CG14291 gene product [Drosophila; E=9e-27 prf:2204388A; sulphamidase [Homo sapiens]; E=3e-25 COG: Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=8e-36 PA0924; COG3083 Predicted hydrolase of alkaline phosphatase; E=3e-05 Rv0711; COG3119 Arylsulfatase A and related enzymes; E=5e-04 PFAM: PF00884; Sulfatase; E=2.8e-22; arylsulfatase 2050223 arsA 1791590 arsA Rhodopirellula baltica SH 1 arylsulfatase NP_865822.1 2048754 R 243090 CDS NP_865823.1 32472829 1790747 2050260..2050421 1 NC_005027.1 hypothetical protein 2050421 1790747 RB3958 Rhodopirellula baltica SH 1 hypothetical protein NP_865823.1 2050260 D 243090 CDS NP_865824.1 32472830 1793454 complement(2050392..2050802) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:E75594; conserved hypothetical protein - Deinococcus radiodurans; E=7e-11 pir:B83042; hypothetical protein PA4830 [imported] - Pseudomonas; E=6e-08 ddbj:BAB06321.1; (AP001516) BH2602~unknown conserved protein in; E=7e-07 COG: DRA0017; COG2050 Uncharacterized protein PaaI, possibly involved in; E=7e-12 PFAM: PF02584; Uncharacterized protein PaaI, COG205; E=1.4e-12; hypothetical protein 2050802 1793454 RB3959 Rhodopirellula baltica SH 1 hypothetical protein NP_865824.1 2050392 R 243090 CDS NP_865825.1 32472831 1794688 complement(2050885..2052723) 1 NC_005027.1 PMID: 7690140 PMID: 7816544 best DB hits: BLAST: ddbj:BAB07103.1; (AP001518) sodiumsulfate symporter [Bacillus; E=5e-86 swissprot:Q39593; SAC1_CHLRE SULFUR DEPRIVATION RESPONSE; E=1e-75 gb:AAG20642.1; (AE005133) arsenite transport protein; ArsB; E=4e-62 COG: BH3384; COG0471 Di- and tricarboxylate transporters; E=5e-87 PAB1107; COG1055 Na+/H+ antiporter NhaD and related arsenite; E=4e-06 jhp0200; COG0471 Di- and tricarboxylate transporters; E=9e-05 PFAM: PF02080; Potassium channel; E=4.1e-08; sodium/sulfate symporter 2052723 1794688 RB3960 Rhodopirellula baltica SH 1 sodium/sulfate symporter NP_865825.1 2050885 R 243090 CDS NP_865826.1 32472832 1792090 2052742..2052870 1 NC_005027.1 hypothetical protein 2052870 1792090 RB3963 Rhodopirellula baltica SH 1 hypothetical protein NP_865826.1 2052742 D 243090 CDS NP_865827.1 32472833 1791407 complement(2052859..2052984) 1 NC_005027.1 hypothetical protein 2052984 1791407 RB3964 Rhodopirellula baltica SH 1 hypothetical protein NP_865827.1 2052859 R 243090 CDS NP_865828.1 32472834 1793907 2052983..2053240 1 NC_005027.1 hypothetical protein 2053240 1793907 RB3966 Rhodopirellula baltica SH 1 hypothetical protein NP_865828.1 2052983 D 243090 CDS NP_865829.1 32472835 1793610 2053237..2054871 1 NC_005027.1 PMID: 8031825 best DB hits: BLAST: gb:AAG20007.1; (AE005081) pantothenate permease; PanF; E=2e-20 pir:C69115; sodiumproline symporter (proline permease) -; E=3e-11 pir:B69833; metabolite permease homolog yhjB - Bacillus subtilis; E=7e-11 COG: VNG1785G; COG0591 Na+/proline, Na+/panthothenate symporters and; E=2e-21 panF; COG0591 Na+/proline, Na+/panthothenate symporters and related; E=3e-04 NMB0402; COG0591 Na+/proline, Na+/panthothenate symporters and; E=7e-04 PFAM: PF00474; Sodium:solute symporter family; E=0.11; sodium/proline symporter (proline permease) 2054871 1793610 RB3967 Rhodopirellula baltica SH 1 sodium/proline symporter (proline permease) NP_865829.1 2053237 D 243090 CDS NP_865830.1 32472836 1794565 complement(2054874..2055122) 1 NC_005027.1 hypothetical protein 2055122 1794565 RB3970 Rhodopirellula baltica SH 1 hypothetical protein NP_865830.1 2054874 R 243090 CDS NP_865831.1 32472837 1790297 2055123..2056121 1 NC_005027.1 signal peptide 2056121 1790297 RB3971 Rhodopirellula baltica SH 1 signal peptide NP_865831.1 2055123 D 243090 CDS NP_865832.1 32472838 1793887 2056175..2056288 1 NC_005027.1 hypothetical protein 2056288 1793887 RB3972 Rhodopirellula baltica SH 1 hypothetical protein NP_865832.1 2056175 D 243090 CDS NP_865833.1 32472839 1794221 complement(2056253..2056375) 1 NC_005027.1 hypothetical protein 2056375 1794221 RB3973 Rhodopirellula baltica SH 1 hypothetical protein NP_865833.1 2056253 R 243090 CDS NP_865834.1 32472840 1791911 2056416..2056565 1 NC_005027.1 hypothetical protein 2056565 1791911 RB3974 Rhodopirellula baltica SH 1 hypothetical protein NP_865834.1 2056416 D 243090 CDS NP_865835.1 32472841 1795304 2056726..2057340 1 NC_005027.1 hypothetical protein 2057340 1795304 RB3975 Rhodopirellula baltica SH 1 hypothetical protein NP_865835.1 2056726 D 243090 CDS NP_865836.1 32472842 1792463 2057337..2057897 1 NC_005027.1 signal peptide 2057897 1792463 RB3979 Rhodopirellula baltica SH 1 signal peptide NP_865836.1 2057337 D 243090 CDS NP_865837.1 32472843 1791247 2058000..2058485 1 NC_005027.1 hypothetical protein 2058485 1791247 RB3981 Rhodopirellula baltica SH 1 hypothetical protein NP_865837.1 2058000 D 243090 CDS NP_865838.1 32472844 1791187 2058614..2058874 1 NC_005027.1 PMID: 9163424 best DB hits: BLAST: swissprot:P55482; Y4HR_RHISN HYPOTHETICAL 8.8 KD PROTEIN Y4HR; E=4e-15; hypothetical protein 2058874 1791187 RB3982 Rhodopirellula baltica SH 1 hypothetical protein NP_865838.1 2058614 D 243090 CDS NP_865839.1 32472845 1793147 complement(2058909..2059145) 1 NC_005027.1 hypothetical protein 2059145 1793147 RB3983 Rhodopirellula baltica SH 1 hypothetical protein NP_865839.1 2058909 R 243090 CDS NP_865840.1 32472846 1794464 2059197..2059634 1 NC_005027.1 hypothetical protein 2059634 1794464 RB3985 Rhodopirellula baltica SH 1 hypothetical protein NP_865840.1 2059197 D 243090 CDS NP_865841.1 32472847 1793757 2059740..2060306 1 NC_005027.1 signal peptide 2060306 1793757 RB3988 Rhodopirellula baltica SH 1 signal peptide NP_865841.1 2059740 D 243090 CDS NP_865842.1 32472848 1792324 2060382..2060714 1 NC_005027.1 hypothetical protein 2060714 1792324 RB3989 Rhodopirellula baltica SH 1 hypothetical protein NP_865842.1 2060382 D 243090 CDS NP_865843.1 32472849 1790921 2060721..2060888 1 NC_005027.1 hypothetical protein 2060888 1790921 RB3990 Rhodopirellula baltica SH 1 hypothetical protein NP_865843.1 2060721 D 243090 CDS NP_865844.1 32472850 1795555 complement(2060864..2061145) 1 NC_005027.1 hypothetical protein 2061145 1795555 RB3991 Rhodopirellula baltica SH 1 hypothetical protein NP_865844.1 2060864 R 243090 CDS NP_865845.1 32472851 1791050 2060926..2061081 1 NC_005027.1 hypothetical protein 2061081 1791050 RB3992 Rhodopirellula baltica SH 1 hypothetical protein NP_865845.1 2060926 D 243090 CDS NP_865846.1 32472852 1790055 2061165..2061287 1 NC_005027.1 hypothetical protein 2061287 1790055 RB3993 Rhodopirellula baltica SH 1 hypothetical protein NP_865846.1 2061165 D 243090 CDS NP_865847.1 32472853 1790983 2061291..2061866 1 NC_005027.1 hypothetical protein 2061866 1790983 RB3994 Rhodopirellula baltica SH 1 hypothetical protein NP_865847.1 2061291 D 243090 CDS NP_865848.1 32472854 1797117 complement(2061980..2062264) 1 NC_005027.1 hypothetical protein 2062264 1797117 RB3995 Rhodopirellula baltica SH 1 hypothetical protein NP_865848.1 2061980 R 243090 CDS NP_865849.1 32472855 1794022 complement(2062268..2063416) 1 NC_005027.1 PMID: 1646375 best DB hits: BLAST: prf:2115270C; transposase [Weeksella zoohelcum]; E=1e-33 swissprot:P55631; Y4QJ_RHISN TRANSPOSASE Y4QJ -----; E=1e-31 swissprot:P24607; T801_PSESH TRANSPOSASE FOR INSERTION SEQUENCE; E=4e-10; transposase 2063416 1794022 RB3997 Rhodopirellula baltica SH 1 transposase NP_865849.1 2062268 R 243090 CDS NP_865850.1 32472856 1790296 complement(2063431..2064741) 1 NC_005027.1 PMID: 8195081 PMID: 2821509 best DB hits: BLAST: swissprot:P55632; Y4QK_RHISN INTEGRASERECOMBINASE Y4QK; E=4e-39 swissprot:P55429; Y4EF_RHISN INTEGRASERECOMBINASE Y4EF; E=2e-32 prf:2115270D; integrase [Weeksella zoohelcum]; E=7e-23 COG: PAB0255; COG0582 Integrase; E=1e-20 PFAM: PF02899; Phage integrase, N-terminal S; E=0.3 PF00589; Phage integrase; E=8e-31; integrase 2064741 1790296 RB3999 Rhodopirellula baltica SH 1 integrase NP_865850.1 2063431 R 243090 CDS NP_865851.1 32472857 1793295 2064633..2065058 1 NC_005027.1 hypothetical protein 2065058 1793295 RB4000 Rhodopirellula baltica SH 1 hypothetical protein NP_865851.1 2064633 D 243090 CDS NP_865852.1 32472858 1794568 2065146..2065298 1 NC_005027.1 hypothetical protein 2065298 1794568 RB4001 Rhodopirellula baltica SH 1 hypothetical protein NP_865852.1 2065146 D 243090 CDS NP_865853.1 32472859 1795950 2065341..2066792 1 NC_005027.1 best DB hits: BLAST: embl:CAA97268.1; (Z73025) ORF YGR240c [Saccharomyces cerevisiae]; E=0.83; hypothetical protein 2066792 1795950 RB4002 Rhodopirellula baltica SH 1 hypothetical protein NP_865853.1 2065341 D 243090 CDS NP_865854.1 32472860 1795183 complement(2066862..2067080) 1 NC_005027.1 hypothetical protein 2067080 1795183 RB4005 Rhodopirellula baltica SH 1 hypothetical protein NP_865854.1 2066862 R 243090 CDS NP_865855.1 32472861 1795763 complement(2067163..2067390) 1 NC_005027.1 hypothetical protein 2067390 1795763 RB4007 Rhodopirellula baltica SH 1 hypothetical protein NP_865855.1 2067163 R 243090 CDS NP_865856.1 32472862 1794001 complement(2067413..2070805) 1 NC_005027.1 best DB hits: BLAST: embl:CAB45032.1; (AL078635) large multi-functional protein; E=1e-22 pir:T36423; probable large, multifunctional secreted protein -; E=4e-18 PFAM: PF00034; Cytochrome c; E=0.24 PF01436; NHL repeat; E=0.25; large multi-functional protein 2070805 1794001 RB4008 Rhodopirellula baltica SH 1 large multi-functional protein NP_865856.1 2067413 R 243090 CDS NP_865857.1 32472863 1793010 complement(2070828..2071661) 1 NC_005027.1 PMID: 12093901 best DB hits: BLAST: ddbj:BAB05241.1; (AP001512) thioredoxin (thiol:disulfide; E=0.019 ddbj:BAB05296.1; (AP001512) cytochrome c biogenesis (thioredoxin); E=0.12 pir:E69891; cytochrome c biogenesis protein CycX homolog homolog; E=0.15 COG: BH1522; COG0526 Thiol-disulfide isomerase and thioredoxins; E=0.002; hypothetical protein 2071661 1793010 RB4011 Rhodopirellula baltica SH 1 hypothetical protein NP_865857.1 2070828 R 243090 CDS NP_865858.1 32472864 1790326 complement(2071700..2074240) 1 NC_005027.1 PMID: 10322435 PMID: 9862990 best DB hits: BLAST: pir:B83150; probable ATP-dependent helicase PA3961 [imported] -; E=1e-113 gb:AAC45544.1; (U49051) HelO [Sinorhizobium meliloti]; E=1e-110 pir:E82708; ATP-dependent helicase XF1229 [imported] - Xylella; E=1e-107 COG: PA3961; COG1643 HrpA-like helicases; E=1e-114 PFAM: PF00270; DEAD/DEAH box helicase; E=0.19 PF00271; Helicase conserved C-terminal; E=3.7e-12; ATP-dependent helicase 2074240 hrpB 1790326 hrpB Rhodopirellula baltica SH 1 ATP-dependent helicase NP_865858.1 2071700 R 243090 CDS NP_865859.1 32472865 1794918 complement(2074186..2075607) 1 NC_005027.1 PMID: 10846217 best DB hits: BLAST: embl:CAB55348.1; (AJ238716) acetyl xylan esterase [Ruminococcus; E=5e-07; acetyl xylan esterase 2075607 1794918 RB4014 Rhodopirellula baltica SH 1 acetyl xylan esterase NP_865859.1 2074186 R 243090 CDS NP_865860.1 32472866 1797118 complement(2075604..2076314) 1 NC_005027.1 best DB hits: PFAM: PF00054; Laminin G domain; E=0.012; signal peptide 2076314 1797118 RB4015 Rhodopirellula baltica SH 1 signal peptide NP_865860.1 2075604 R 243090 CDS NP_865861.1 32472867 1794746 2076280..2078145 1 NC_005027.1 PMID: 10950929 best DB hits: BLAST: pir:F70837; probable sulfatase (EC 3.1.6.-) atsG - Mycobacterium; E=3e-26 gb:AAG17207.1; AF217204_1 (AF217204) heparan sulfate sulfamidase; E=2e-20 gb:AAF55607.1; (AE003724) CG14291 gene product [Drosophila; E=5e-20 COG: Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=3e-27 PA0924; COG3083 Predicted hydrolase of alkaline phosphatase; E=7e-05 Rv3299c; COG3119 Arylsulfatase A and related enzymes; E=7e-05 PFAM: PF00884; Sulfatase; E=2.5e-24; sulfatase 2078145 atsG 1794746 atsG Rhodopirellula baltica SH 1 sulfatase NP_865861.1 2076280 D 243090 CDS NP_865862.1 32472868 1796364 2078305..2078910 1 NC_005027.1 signal peptide 2078910 1796364 RB4021 Rhodopirellula baltica SH 1 signal peptide NP_865862.1 2078305 D 243090 CDS NP_865863.1 32472869 1794031 2078917..2079660 1 NC_005027.1 PMID: 8190066 best DB hits: BLAST: pir:S43880; esterase - Spirulina platensis ----- gb:; E=2e-09 pir:S75304; serine esterase - Synechocystis sp. (strain PCC 6803); E=1e-06 pir:F81704; serine esterase, probable TC0413 [imported] - Chlamydia; E=0.002 COG: sll1284; COG0400 Predicted esterase; E=1e-07 PFAM: PF02230; Phospholipase/Carboxylesterase; E=0.27; esterase 2079660 estB 1794031 estB Rhodopirellula baltica SH 1 esterase NP_865863.1 2078917 D 243090 CDS NP_865864.1 32472870 1794934 2079657..2079824 1 NC_005027.1 hypothetical protein 2079824 1794934 RB4023 Rhodopirellula baltica SH 1 hypothetical protein NP_865864.1 2079657 D 243090 CDS NP_865865.1 32472871 1790779 2079821..2080666 1 NC_005027.1 PMID: 3139632 PMID: 7664125 best DB hits: BLAST: pir:S58235; endo-1,4-beta-xylanase (EC 3.2.1.8) 1 precursor -; E=1e-11 swissprot:P10478; XYNZ_CLOTM ENDO-1,4-BETA-XYLANASE Z PRECURSOR; E=1e-10 embl:CAB93667.1; (AJ272430) endoxylanase [Ruminococcus; E=1e-09 COG: yieL; COG2382 Enterochelin esterase and related enzymes; E=4e-05 DR0779_2; COG2819 Predicted hydrolase of the alpha/beta superfamily; E=0.001; endo-1,4-beta-xylanase 2080666 1790779 RB4024 Rhodopirellula baltica SH 1 endo-1,4-beta-xylanase NP_865865.1 2079821 D 243090 CDS NP_865866.1 32472872 1792578 2080812..2081081 1 NC_005027.1 hypothetical protein 2081081 1792578 RB4026 Rhodopirellula baltica SH 1 hypothetical protein NP_865866.1 2080812 D 243090 CDS NP_865867.1 32472873 1794472 2081109..2081573 1 NC_005027.1 PMID: 10952301 best DB hits: BLAST: pir:F82453; conserved hypothetical protein VCA0489 [imported] -; E=5e-06 pir:F82462; conserved hypothetical protein VCA0423 [imported] -; E=0.002; hypothetical protein 2081573 1794472 RB4029 Rhodopirellula baltica SH 1 hypothetical protein NP_865867.1 2081109 D 243090 CDS NP_865868.1 32472874 1795550 complement(2081637..2083304) 1 NC_005027.1 PMID: 10496921 PMID: 3291115 best DB hits: BLAST: pir:C70584; probable serine-threonine protein kinase - Mycobacterium; E=2e-36 embl:CAB62227.1; (AJ250200) serinethreonine protein; E=2e-36 ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=6e-36 COG: Rv0931c_1; COG0515 Serine/threonine protein kinases; E=2e-37 PFAM: PF00069; Protein kinase domain; E=6.8e-40; serine/threonine protein kinase PpkA 2083304 ppkA 1795550 ppkA Rhodopirellula baltica SH 1 serine/threonine protein kinase PpkA NP_865868.1 2081637 R 243090 CDS NP_865869.1 32472875 1790740 complement(2083440..2084885) 1 NC_005027.1 hypothetical protein 2084885 1790740 RB4032 Rhodopirellula baltica SH 1 hypothetical protein NP_865869.1 2083440 R 243090 CDS NP_865870.1 32472876 1792481 2084900..2085007 1 NC_005027.1 hypothetical protein 2085007 1792481 RB4035 Rhodopirellula baltica SH 1 hypothetical protein NP_865870.1 2084900 D 243090 CDS NP_865871.1 32472877 1793167 complement(2085009..2088578) 1 NC_005027.1 best DB hits: PFAM: PF00703; Glycosyl hydrolases family 2,; E=0.0075; hypothetical protein 2088578 1793167 RB4037 Rhodopirellula baltica SH 1 hypothetical protein NP_865871.1 2085009 R 243090 CDS NP_865872.1 32472878 1797099 2088275..2089261 1 NC_005027.1 hypothetical protein 2089261 1797099 RB4041 Rhodopirellula baltica SH 1 hypothetical protein NP_865872.1 2088275 D 243090 CDS NP_865873.1 32472879 1792211 complement(2089389..2090744) 1 NC_005027.1 best DB hits: BLAST: pir:F72591; probable sugar phosphate transferase APE1202 - Aeropyrum; E=5e-11 pir:E71207; probable glucose-1-phosphate thymidylyltransferase -; E=3e-10 pir:G75020; glucose-1-phosphate thymidylyltransferase (grad-2); E=5e-10 COG: APE1202; COG1208 Nucleoside-diphosphate-sugar pyrophosphorylases; E=5e-12 TM1629; COG1207 N-acetylglucosamine-1-phosphate uridyltransferase; E=4e-04 MJ1101; COG1208 Nucleoside-diphosphate-sugar pyrophosphorylases; E=0.006; glucose-1-phosphate thymidylyltransferase 2090744 1792211 RB4043 Rhodopirellula baltica SH 1 glucose-1-phosphate thymidylyltransferase NP_865873.1 2089389 R 243090 CDS NP_865874.1 32472880 1796833 2090795..2090953 1 NC_005027.1 hypothetical protein 2090953 1796833 RB4046 Rhodopirellula baltica SH 1 hypothetical protein NP_865874.1 2090795 D 243090 CDS NP_865875.1 32472881 1794917 2090905..2092092 1 NC_005027.1 signal peptide 2092092 1794917 RB4048 Rhodopirellula baltica SH 1 signal peptide NP_865875.1 2090905 D 243090 CDS NP_865876.1 32472882 1792316 complement(2092210..2092752) 1 NC_005027.1 hypothetical protein 2092752 1792316 RB4051 Rhodopirellula baltica SH 1 hypothetical protein NP_865876.1 2092210 R 243090 CDS NP_865877.1 32472883 1794017 complement(2092821..2094125) 1 NC_005027.1 PMID: 11759840 best DB hits: BLAST: embl:CAA82877.1; (Z29987) VLA-2 homologue [Mus musculus]; E=0.40 PFAM: PF00092; von Willebrand factor type A do; E=0.33; signal peptide 2094125 1794017 RB4053 Rhodopirellula baltica SH 1 signal peptide NP_865877.1 2092821 R 243090 CDS NP_865878.1 32472884 1791877 complement(2094089..2094352) 1 NC_005027.1 hypothetical protein 2094352 1791877 RB4054 Rhodopirellula baltica SH 1 hypothetical protein NP_865878.1 2094089 R 243090 CDS NP_865879.1 32472885 1793405 complement(2094349..2094819) 1 NC_005027.1 best DB hits: PFAM: PF00499; NADH-ubiquinone/plastoquinone oxi; E=0.23; hypothetical protein 2094819 1793405 RB4059 Rhodopirellula baltica SH 1 hypothetical protein NP_865879.1 2094349 R 243090 CDS NP_865880.1 32472886 1792416 complement(2094831..2095403) 1 NC_005027.1 hypothetical protein 2095403 1792416 RB4060 Rhodopirellula baltica SH 1 hypothetical protein NP_865880.1 2094831 R 243090 CDS NP_865881.1 32472887 1796496 2095498..2096964 1 NC_005027.1 PMID: 8817497 PMID: 8439290 best DB hits: BLAST: pir:E82546; pre-pilin leader peptidase XF2537 [imported] - Xylella; E=5e-06 swissprot:P36642; LEP4_PSEPU TYPE 4 PREPILIN-LIKE PROTEINS LEADER; E=1e-05 gb:AAC17878.1; (AF062531) signal peptidase [Pseudomonas putida; E=1e-04 COG: XF2537; COG1989 Signal peptidase, cleaves prepilin-like proteins; E=5e-07 PFAM: PF01478; Type III leader peptidase famil; E=3.7e-05; type 4 prepilin-like proteins leader peptide processing enzyme 2096964 1796496 RB4061 Rhodopirellula baltica SH 1 type 4 prepilin-like proteins leader peptide processing enzyme NP_865881.1 2095498 D 243090 CDS NP_865882.1 32472888 1795821 complement(2097008..2097298) 1 NC_005027.1 hypothetical protein 2097298 1795821 RB4066 Rhodopirellula baltica SH 1 hypothetical protein NP_865882.1 2097008 R 243090 CDS NP_865883.1 32472889 1793739 2097313..2098392 1 NC_005027.1 PMID: 8588735 PMID: 7890743 best DB hits: BLAST: pir:S57490; molybdopterin cofactor synthesis protein - Arthrobacter; E=2e-74 swissprot:Q44118; MOAA_ARTNI PROBABLE MOLYBDOPTERIN COFACTOR; E=2e-74 swissprot:Q39055; CNX2_ARATH MOLYBDOPTERIN BIOSYNTHESIS CNX2; E=4e-64 COG: Rv0869c; COG2896 Molybdenum cofactor biosynthesis enzyme; E=5e-59 PFAM: PF01444; moaA / nifB / pqqE family; E=2.5e-62; molybdopterin cofactor synthesis protein A 2098392 moaA 1793739 moaA Rhodopirellula baltica SH 1 molybdopterin cofactor synthesis protein A NP_865883.1 2097313 D 243090 CDS NP_865884.1 32472890 1793709 2098441..2099550 1 NC_005027.1 best DB hits: BLAST: pir:H83105; conserved hypothetical protein PA4319 [imported] -; E=3e-16 pir:S75694; hypothetical protein slr1478 - Synechocystis sp. (strain; E=2e-09 ddbj:BAB04452.1; (AP001509) BH0733~unknown conserved protein in; E=3e-05 COG: PA4319; COG1300 Uncharacterized membrane protein; E=2e-17 PFAM: PF01944; Integral membrane protein DUF95; E=0.69; hypothetical protein 2099550 1793709 RB4071 Rhodopirellula baltica SH 1 hypothetical protein NP_865884.1 2098441 D 243090 CDS NP_865885.1 32472891 1791992 2099516..2100616 1 NC_005027.1 signal peptide 2100616 1791992 RB4073 Rhodopirellula baltica SH 1 signal peptide NP_865885.1 2099516 D 243090 CDS NP_865886.1 32472892 1790486 2100715..2101524 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB04448.1; (AP001509) BH0729~unknown conserved protein in; E=0.30; signal peptide 2101524 1790486 RB4077 Rhodopirellula baltica SH 1 signal peptide NP_865886.1 2100715 D 243090 CDS NP_865887.1 32472893 1796206 2101521..2103161 1 NC_005027.1 hypothetical protein 2103161 1796206 RB4079 Rhodopirellula baltica SH 1 hypothetical protein NP_865887.1 2101521 D 243090 CDS NP_865888.1 32472894 1795976 2103158..2104297 1 NC_005027.1 PMID: 8997703 PMID: 1657871 PMID: 9163922 best DB hits: BLAST: pir:C83106; conserved hypothetical protein PA4322 [imported] -; E=2e-79 pir:E70792; probable regulatory protein - Mycobacterium tuberculosis; E=7e-74 embl:CAB90929.1; (AL355774) regulatory protein; E=2e-69 COG: PA4322; COG0714 MoxR-like ATPases; E=2e-80 PFAM: PF00004; ATPase associated with va; E=0.0093 PF01078; Magnesium chelatase, subunit Chl; E=0.0014; regulatory protein 2104297 moxR 1795976 moxR Rhodopirellula baltica SH 1 regulatory protein NP_865888.1 2103158 D 243090 CDS NP_865889.1 32472895 1793279 2104537..2104647 1 NC_005027.1 hypothetical protein 2104647 1793279 RB4083 Rhodopirellula baltica SH 1 hypothetical protein NP_865889.1 2104537 D 243090 CDS NP_865890.1 32472896 1795145 2104677..2105036 1 NC_005027.1 hypothetical protein 2105036 1795145 RB4084 Rhodopirellula baltica SH 1 hypothetical protein NP_865890.1 2104677 D 243090 CDS NP_865891.1 32472897 1793959 2105146..2105904 1 NC_005027.1 PMID: 11407917 best DB hits: BLAST: gb:AAB36936.1; (U77780) unknown [Chlorobium limicola]; E=6e-11 gb:AAD42964.1; AF144883_1 (AF144883) partition protein; E=7e-08 gb:AAD21669.1; (AF133830) pVS1 partitioning protein [Shuttle; E=8e-08 COG: DR0013; COG1192 ATPases involved in chromosome partitioning; E=1e-06 PH0612; COG0455 ATPases involved in chromosome partitioning; E=2e-04 aq_aa35; COG1192 ATPases involved in chromosome partitioning; E=2e-04 PFAM: PF02374; Anion-transporting ATPase; E=2.9e-06 PF01583; Adenylylsulfate kinase; E=0.00057 PF00991; ParA family ATPase; E=0.14; partition protein 2105904 1793959 RB4087 Rhodopirellula baltica SH 1 partition protein NP_865891.1 2105146 D 243090 CDS NP_865892.1 32472898 1791709 2105915..2106241 1 NC_005027.1 hypothetical protein 2106241 1791709 RB4090 Rhodopirellula baltica SH 1 hypothetical protein NP_865892.1 2105915 D 243090 CDS NP_865893.1 32472899 1794958 2106238..2107443 1 NC_005027.1 PMID: 8041625 best DB hits: BLAST: gb:AAG55028.1; AE005248_9 (AE005248) receptor; E=4e-61 gb:AAG54539.1; AE005200_1 (AE005200) Z0271 gene product; E=1e-60 swissprot:P28917; YDCC_ECOLI H REPEAT-ASSOCIATED PROTEIN IN; E=1e-60 PFAM: PF01811; Transposase; E=1.3e-65; H repeat-containing protein ydcC 2107443 ydcC 1794958 ydcC Rhodopirellula baltica SH 1 H repeat-containing protein ydcC NP_865893.1 2106238 D 243090 CDS NP_865894.1 32472900 1791256 2107600..2107737 1 NC_005027.1 hypothetical protein 2107737 1791256 RB4093 Rhodopirellula baltica SH 1 hypothetical protein NP_865894.1 2107600 D 243090 CDS NP_865895.1 32472901 1795340 2107798..2108211 1 NC_005027.1 hypothetical protein 2108211 1795340 RB4094 Rhodopirellula baltica SH 1 hypothetical protein NP_865895.1 2107798 D 243090 CDS NP_865896.1 32472902 1792563 2108244..2110445 1 NC_005027.1 best DB hits: BLAST: gb:AAB91577.2; (AF242881) ymc [Agrobacterium tumefaciens]; E=1e-04 gb:AAF01192.1; AF179401_1 (AF179401) epoxidase; E=0.11 pir:D70028; conserved hypothetical protein yvaO - Bacillus subtilis; E=0.16 PFAM: PF01381; Helix-turn-helix; E=3.4e-10; hypothetical protein 2110445 1792563 RB4097 Rhodopirellula baltica SH 1 hypothetical protein NP_865896.1 2108244 D 243090 CDS NP_865897.1 32472903 1795497 2110438..2111625 1 NC_005027.1 best DB hits: PFAM: PF01658; Myo-inositol-1-phosphate synth; E=0.89; signal peptide 2111625 1795497 RB4099 Rhodopirellula baltica SH 1 signal peptide NP_865897.1 2110438 D 243090 CDS NP_865898.1 32472904 1790421 2111716..2112267 1 NC_005027.1 hypothetical protein 2112267 1790421 RB4100 Rhodopirellula baltica SH 1 hypothetical protein NP_865898.1 2111716 D 243090 CDS NP_865899.1 32472905 1792342 2112335..2112553 1 NC_005027.1 hypothetical protein 2112553 1792342 RB4104 Rhodopirellula baltica SH 1 hypothetical protein NP_865899.1 2112335 D 243090 CDS NP_865900.1 32472906 1791558 2112565..2113191 1 NC_005027.1 PMID: 741263 best DB hits: BLAST: swissprot:Q9X1P3; RADC_THEMA DNA REPAIR PROTEIN RADC HOMOLOG; E=6e-25 ddbj:BAB06751.1; (AP001517) DNA repair protein [Bacillus; E=3e-23 swissprot:Q02170; RADC_BACSU DNA REPAIR PROTEIN RADC HOMOLOG; E=2e-22 COG: TM1557; COG2003 DNA repair proteins; E=5e-26; hypothetical protein 2113191 radC 1791558 radC Rhodopirellula baltica SH 1 hypothetical protein NP_865900.1 2112565 D 243090 CDS NP_865901.1 32472907 1791643 complement(2113242..2114714) 1 NC_005027.1 hypothetical protein 2114714 1791643 RB4106 Rhodopirellula baltica SH 1 hypothetical protein NP_865901.1 2113242 R 243090 CDS NP_865902.1 32472908 1794416 2114854..2114982 1 NC_005027.1 hypothetical protein 2114982 1794416 RB4107 Rhodopirellula baltica SH 1 hypothetical protein NP_865902.1 2114854 D 243090 CDS NP_865903.1 32472909 1790902 complement(2114968..2115666) 1 NC_005027.1 PMID: 11214968; hypothetical protein 2115666 1790902 RB4108 Rhodopirellula baltica SH 1 hypothetical protein NP_865903.1 2114968 R 243090 CDS NP_865904.1 32472910 1793780 2115765..2115926 1 NC_005027.1 hypothetical protein 2115926 1793780 RB4109 Rhodopirellula baltica SH 1 hypothetical protein NP_865904.1 2115765 D 243090 CDS NP_865905.1 32472911 1790384 complement(2115860..2116267) 1 NC_005027.1 hypothetical protein 2116267 1790384 RB4111 Rhodopirellula baltica SH 1 hypothetical protein NP_865905.1 2115860 R 243090 CDS NP_865906.1 32472912 1795244 complement(2116228..2116365) 1 NC_005027.1 hypothetical protein 2116365 1795244 RB4112 Rhodopirellula baltica SH 1 hypothetical protein NP_865906.1 2116228 R 243090 CDS NP_865907.1 32472913 1793408 complement(2116503..2117681) 1 NC_005027.1 PMID: 2542093 best DB hits: BLAST: gb:AAG55028.1; AE005248_9 (AE005248) receptor; E=4e-61 gb:AAG54539.1; AE005200_1 (AE005200) Z0271 gene product; E=1e-60 swissprot:P28917; YDCC_ECOLI H REPEAT-ASSOCIATED PROTEIN IN; E=1e-60 PFAM: PF01811; Transposase; E=1.3e-65; H repeat-containing protein ydcC 2117681 ydcC 1793408 ydcC Rhodopirellula baltica SH 1 H repeat-containing protein ydcC NP_865907.1 2116503 R 243090 CDS NP_865908.1 32472914 1795562 2117690..2117971 1 NC_005027.1 hypothetical protein 2117971 1795562 RB4114 Rhodopirellula baltica SH 1 hypothetical protein NP_865908.1 2117690 D 243090 CDS NP_865909.1 32472915 1791303 complement(2118055..2119110) 1 NC_005027.1 best DB hits: BLAST: embl:CAC01558.1; (AL391039) conserved hypothetical protein; E=3e-27 gb:AAG19482.1; (AE005040) sulfite oxidase homolog; YuiH; E=3e-27 pir:A70013; sulfite oxidase homolog yuiH - Bacillus subtilis -----; E=6e-26 COG: VNG1084G; COG2041 Uncharacterized enzymes, related to nitrate; E=3e-28 sll1011_2; COG1357 Uncharacterized low-complexity proteins; E=1e-11 PA4692; COG2041 Uncharacterized enzymes, related to nitrate; E=2e-11 PFAM: PF00174; Oxidoreductase molybdopterin b; E=0.16 PF00805; Pentapeptide repeats (8 copies; E=3e-06; nitrate reductase related protein 2119110 1791303 RB4115 Rhodopirellula baltica SH 1 nitrate reductase related protein NP_865909.1 2118055 R 243090 CDS NP_865910.1 32472916 1791570 complement(2119149..2122532) 1 NC_005027.1 PMID: 3040663 PMID: 3260234 PMID: 2404938 best DB hits: BLAST: swissprot:P12287; BLAR_BACLI REGULATORY PROTEIN BLAR1 -----; E=2e-05 pir:I39942; penicillinase antirepressor penJ - Bacillus; E=5e-05 swissprot:P18357; BLAR_STAAU REGULATORY PROTEIN BLAR1 -----; E=3e-04 PFAM: PF01271; Granin (chromogranin or secretograni; E=0.87; regulatory protein blaR1 2122532 blaR 1791570 blaR Rhodopirellula baltica SH 1 regulatory protein blaR1 NP_865910.1 2119149 R 243090 CDS NP_865911.1 32472917 1792278 complement(2122535..2122978) 1 NC_005027.1 PMID: 3096969 PMID: 3305074 PMID: 3260234 best DB hits: BLAST: swissprot:P06555; BLAI_BACLI PENICILLINASE REPRESSOR (REGULATORY; E=7e-10 pir:B28183; beta-lactamase repressor protein - Bacillus; E=8e-09 pir:S74550; hypothetical protein slr0240 - Synechocystis sp. (strain; E=2e-05 PFAM: PF00392; Bacterial regulatory proteins, gntR; E=0.082; penicillinase repressor 2122978 blaI 1792278 blaI Rhodopirellula baltica SH 1 penicillinase repressor NP_865911.1 2122535 R 243090 CDS NP_865912.1 32472918 1791236 2123102..2123269 1 NC_005027.1 signal peptide 2123269 1791236 RB4121 Rhodopirellula baltica SH 1 signal peptide NP_865912.1 2123102 D 243090 CDS NP_865913.1 32472919 1791278 2123372..2123818 1 NC_005027.1 best DB hits: BLAST: pir:S75246; hypothetical protein slr1023 - Synechocystis sp. (strain; E=1e-20 pir:G71082; probable mannose-1-phosphate guanylyl transferase -; E=0.65; hypothetical protein 2123818 1791278 RB4123 Rhodopirellula baltica SH 1 hypothetical protein NP_865913.1 2123372 D 243090 CDS NP_865914.1 32472920 1792636 2124045..2124884 1 NC_005027.1 best DB hits: BLAST: pir:T37061; probable secreted protein - Streptomyces coelicolor; E=5e-26 pir:T35483; hypothetical protein SC6C5.12c SC6C5.12c - Streptomyces; E=2e-17 swissprot:P75772; YBHP_ECOLI HYPOTHETICAL 28.8 KDA PROTEIN IN; E=3e-11 PFAM: PF00783; Inositol polyphosphate phosph; E=0.5; hypothetical protein 2124884 1792636 RB4127 Rhodopirellula baltica SH 1 hypothetical protein NP_865914.1 2124045 D 243090 CDS NP_865915.1 32472921 1794439 2124835..2125032 1 NC_005027.1 hypothetical protein 2125032 1794439 RB4128 Rhodopirellula baltica SH 1 hypothetical protein NP_865915.1 2124835 D 243090 CDS NP_865916.1 32472922 1792292 2125088..2126368 1 NC_005027.1 PMID: 99287316 best DB hits: BLAST: pir:C72377; hypothetical protein TM0440 - Thermotoga maritima; E=1e-22; hypothetical protein 2126368 1792292 RB4129 Rhodopirellula baltica SH 1 hypothetical protein NP_865916.1 2125088 D 243090 CDS NP_865917.1 32472923 1796803 2126371..2127399 1 NC_005027.1 PMID: 3622514 PMID: 1593644 best DB hits: BLAST: swissprot:P39400; YJJN_ECOLI HYPOTHETICAL ZINC-TYPE ALCOHOL; E=1e-51 gb:AAG59541.1; AE005667_5 (AE005667) oxidoreductase; E=9e-51 pir:F69852; L-iditol 2-dehydrogenase (EC 1.1.1.14) homolog yjmD -; E=1e-38 COG: yjjN; COG1063 Threonine dehydrogenase and related Zn-dependent; E=1e-52 PFAM: PF01494; FAD binding domain; E=0.28 PF00070; Pyridine nucleotide-disulphide; E=0.0008 PF00107; Zinc-binding dehydrogenases; E=1.3e-68; zinc-type alcohol dehydrogenase 2127399 yjjN 1796803 yjjN Rhodopirellula baltica SH 1 zinc-type alcohol dehydrogenase NP_865917.1 2126371 D 243090 CDS NP_865918.1 32472924 1790751 complement(2127468..2127818) 1 NC_005027.1 best DB hits: BLAST: embl:CAA53530.1; (X75926) ABC transporter [Mus musculus]; E=0.53; hypothetical protein 2127818 1790751 RB4132 Rhodopirellula baltica SH 1 hypothetical protein NP_865918.1 2127468 R 243090 CDS NP_865919.1 32472925 1791965 2128240..2128680 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: embl:CAA11074.1; (AJ223073) phosphate regulatory protein; E=3e-11 pir:B70152; response regulatory protein (rrp-1) homolog - Lyme; E=1e-10 gb:AAD30120.2; (AF135389) DNA binding response regulator RpaA; E=2e-10 COG: BB0419_1; COG0784 CheY-like receiver domains; E=1e-11 slr0115; COG0745 Response regulators consisting of a CheY-like; E=2e-10 slr1305_1; COG0784 CheY-like receiver domains; E=3e-09 PFAM: PF00072; Response regulator receiver doma; E=1.4e-18; regulatory components of sensory transduction system 2128680 phoB 1791965 phoB Rhodopirellula baltica SH 1 regulatory components of sensory transduction system NP_865919.1 2128240 D 243090 CDS NP_865920.1 32472926 1794819 2128586..2129998 1 NC_005027.1 PMID: 2666400 PMID: 11243806 best DB hits: BLAST: gb:AAF33505.1; (AF170176) Salmonella typhimurium sensor protein; E=1e-13 gb:AAG59806.1; AF305914_1 (AF305914) HydH [Klebsiella oxytoca]; E=2e-13 pir:S70528; sensor protein pilS - Myxococcus xanthus ----- gb:; E=4e-13 COG: BH3477; COG0642 Sensory transduction histidine kinases; E=2e-13 PFAM: PF00512; His Kinase A (phosphoacceptor) doma; E=2e-11 PF02518; Histidine kinase-, DNA gyrase B-, p; E=2.9e-21; sensor protein (HYDH)- sensory transduction histidine kinase 2129998 hydH 1794819 hydH Rhodopirellula baltica SH 1 sensor protein (HYDH)- sensory transduction histidine kinase NP_865920.1 2128586 D 243090 CDS NP_865921.1 32472927 1796346 2130009..2130140 1 NC_005027.1 hypothetical protein 2130140 1796346 RB4142 Rhodopirellula baltica SH 1 hypothetical protein NP_865921.1 2130009 D 243090 CDS NP_865922.1 32472928 1792354 2130113..2131612 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: swissprot:P73558; GATA_SYNY3 GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE; E=1e-123 pir:H83084; Glu-tRNA(Gln) amidotransferase subunit A PA4483; E=1e-121 swissprot:Q9Z580; GATA_STRCO GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE; E=1e-120 COG: slr0877; COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; E=1e-124 PFAM: PF01425; Amidase; E=1.1e-195; glutamyl-tRNA(Gln) amidotransferase subunit A 2131612 gatA 1792354 gatA Rhodopirellula baltica SH 1 glutamyl-tRNA(Gln) amidotransferase subunit A NP_865922.1 2130113 D 243090 CDS NP_865923.1 32472929 1789963 complement(2131661..2131933) 1 NC_005027.1 hypothetical protein 2131933 1789963 RB4145 Rhodopirellula baltica SH 1 hypothetical protein NP_865923.1 2131661 R 243090 CDS NP_865924.1 32472930 1795623 2131928..2132338 1 NC_005027.1 hypothetical protein 2132338 1795623 RB4147 Rhodopirellula baltica SH 1 hypothetical protein NP_865924.1 2131928 D 243090 CDS NP_865925.1 32472931 1794196 complement(2132396..2132554) 1 NC_005027.1 hypothetical protein 2132554 1794196 RB4149 Rhodopirellula baltica SH 1 hypothetical protein NP_865925.1 2132396 R 243090 CDS NP_865926.1 32472932 1794307 complement(2132600..2133433) 1 NC_005027.1 hypothetical protein 2133433 1794307 RB4150 Rhodopirellula baltica SH 1 hypothetical protein NP_865926.1 2132600 R 243090 CDS NP_865927.1 32472933 1791015 complement(2133421..2134521) 1 NC_005027.1 best DB hits: BLAST: pir:B70469; type IV pilus assembly protein TapB - Aquifex aeolicus; E=0.001 embl:CAA10651.1; (AJ132364) PilB protein [Pseudomonas stutzeri]; E=0.005 pir:S55026; secretion protein - Aeromonas salmonicida ----- gb:; E=0.020 COG: aq_1971; COG2804 Predicted ATPases involved in pili biogenesis, PilB; E=9e-05; type IV pilus assembly protein TapB 2134521 1791015 RB4151 Rhodopirellula baltica SH 1 type IV pilus assembly protein TapB NP_865927.1 2133421 R 243090 CDS NP_865928.1 32472934 1796120 2134647..2135369 1 NC_005027.1 hypothetical protein 2135369 1796120 RB4152 Rhodopirellula baltica SH 1 hypothetical protein NP_865928.1 2134647 D 243090 CDS NP_865929.1 32472935 1790392 2135376..2135555 1 NC_005027.1 hypothetical protein 2135555 1790392 RB4155 Rhodopirellula baltica SH 1 hypothetical protein NP_865929.1 2135376 D 243090 CDS NP_865930.1 32472936 1796013 2135596..2136441 1 NC_005027.1 PMID: 97000351 best DB hits: BLAST: embl:CAB77297.1; (AL160312) conserved hypothetical protein; E=7e-28 pir:E75527; conserved hypothetical protein - Deinococcus radiodurans; E=4e-16 pir:B70392; hypothetical protein aq_1070 - Aquifex aeolicus -----; E=4e-16 COG: DR0370; COG1427 Predicted periplasmic solute-binding protein; E=4e-17 PFAM: PF02621; Uncharacterized ACR, COG1427; E=1.4e-26; hypothetical protein 2136441 1796013 RB4156 Rhodopirellula baltica SH 1 hypothetical protein NP_865930.1 2135596 D 243090 CDS NP_865931.1 32472937 1790587 2136438..2137598 1 NC_005027.1 PMID: 98196666 best DB hits: BLAST: ddbj:BAB06862.1; (AP001517) BH3143~unknown conserved protein in; E=4e-85 pir:H70368; conserved hypothetical protein aq_789 - Aquifex aeolicus; E=1e-84 pir:H64601; conserved hypothetical protein HP0656 - Helicobacter; E=2e-80 COG: BH3143; COG1060 Thiamine biosynthesis enzyme ThiH and related; E=4e-86; oxidoreductase 2137598 1790587 RB4160 Rhodopirellula baltica SH 1 oxidoreductase NP_865931.1 2136438 D 243090 CDS NP_865932.1 32472938 1794576 2137708..2139225 1 NC_005027.1 PMID: 10677288 best DB hits: BLAST: swissprot:O87172; MALQ_THEAQ 4-ALPHA-GLUCANOTRANSFERASE; E=1e-119 swissprot:P72785; MALQ_SYNY3 4-ALPHA-GLUCANOTRANSFERASE; E=1e-118 swissprot:P29851; MALQ_STRPN 4-ALPHA-GLUCANOTRANSFERASE; E=1e-114 COG: sll1676; COG1640 4-alpha-glucanotransferase; E=1e-119 PFAM: PF02446; 4-alpha-glucanotransferase; E=3.9e-185; 4-alpha-glucanotransferase 2139225 malQ 1794576 malQ Rhodopirellula baltica SH 1 4-alpha-glucanotransferase NP_865932.1 2137708 D 243090 CDS NP_865933.1 32472939 1795719 complement(2139180..2139521) 1 NC_005027.1 hypothetical protein 2139521 1795719 RB4162 Rhodopirellula baltica SH 1 hypothetical protein NP_865933.1 2139180 R 243090 CDS NP_865934.1 32472940 1791741 2139632..2141797 1 NC_005027.1 PMID: 8432708 PMID: 7961421 best DB hits: BLAST: gb:AAC45219.1; (U87308) extracytoplasmic function alternative; E=4e-10 gb:AAC45221.1; (U87307) extracytoplasmic function alternative; E=5e-10 pir:H70507; probable sigE protein - Mycobacterium tuberculosis; E=8e-10 COG: Rv1221; COG1595 DNA-directed RNA polymerase specialized sigma; E=7e-11 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=0.065; RNA polymerase sigma-H factor 2141797 algU 1791741 algU Rhodopirellula baltica SH 1 RNA polymerase sigma-H factor NP_865934.1 2139632 D 243090 CDS NP_865935.1 32472941 1790630 2141819..2141950 1 NC_005027.1 hypothetical protein 2141950 1790630 RB4166 Rhodopirellula baltica SH 1 hypothetical protein NP_865935.1 2141819 D 243090 CDS NP_865936.1 32472942 1793911 complement(2141907..2144846) 1 NC_005027.1 PMID: 96312514 best DB hits: BLAST: ddbj:BAB14717.1; (AK023902) unnamed protein product [Homo; E=4e-22 gb:AAC59865.1; (U37373) up-regulated by thyroid hormone in; E=2e-21 ddbj:BAA97210.1; (AB020751) gb AAD55298.1~gene_id:MRG21.5~strong; E=4e-19 COG: slr1608; COG2133 Glucose/sorbosone dehydrogenases; E=1e-11 sll1245; COG2010 Cytochrome c, mono- and diheme variants; E=0.003 XF1740; COG2133 Glucose/sorbosone dehydrogenases; E=0.009 PFAM: PF00034; Cytochrome c; E=0.049; hypothetical protein 2144846 1793911 RB4167 Rhodopirellula baltica SH 1 hypothetical protein NP_865936.1 2141907 R 243090 CDS NP_865937.1 32472943 1794841 complement(2144886..2145026) 1 NC_005027.1 hypothetical protein 2145026 1794841 RB4172 Rhodopirellula baltica SH 1 hypothetical protein NP_865937.1 2144886 R 243090 CDS NP_865938.1 32472944 1797107 2145041..2146054 1 NC_005027.1 PMID: 7584053 PMID: 94301771 best DB hits: BLAST: ddbj:BAB06205.1; (AP001515) signal recognition particle (docking; E=2e-61 embl:CAB13468.1; (Z99112) signal recognition particle (docking; E=7e-61 swissprot:P51835; FTSY_BACSU CELL DIVISION PROTEIN FTSY HOMOLOG; E=2e-60 COG: BH2486; COG0552 Signal recognition particle GTPase; E=2e-62 PFAM: PF01443; Viral (Superfamily 1) RNA hel; E=0.51 PF02223; Thymidylate kinase; E=0.014 PF00448; SRP54-type protein, GTPase do; E=7.4e-103; cell division protein FtsY 2146054 ftsY 1797107 ftsY Rhodopirellula baltica SH 1 cell division protein FtsY NP_865938.1 2145041 D 243090 CDS NP_865939.1 32472945 1790612 2146060..2146641 1 NC_005027.1 tRNA (ms[2]io[6]A)-hydroxylase 2146641 1790612 RB4174 Rhodopirellula baltica SH 1 tRNA (ms[2]io[6]A)-hydroxylase NP_865939.1 2146060 D 243090 CDS NP_865940.1 32472946 1789935 complement(2146638..2146928) 1 NC_005027.1 hypothetical protein 2146928 1789935 RB4176 Rhodopirellula baltica SH 1 hypothetical protein NP_865940.1 2146638 R 243090 CDS NP_865941.1 32472947 1792537 2146908..2147984 1 NC_005027.1 signal peptide 2147984 1792537 RB4178 Rhodopirellula baltica SH 1 signal peptide NP_865941.1 2146908 D 243090 CDS NP_865942.1 32472948 1790520 complement(2148090..2150363) 1 NC_005027.1 PMID: 8346225 best DB hits: BLAST: pir:A48291; ornithine decarboxylase inhibitor - Escherichia coli; E=4e-70 swissprot:Q06065; ATOC_ECOLI ACETOACETATE METABOLISM REGULATORY; E=4e-70 gb:AAG45333.1; AF273214_1 (AF273214) SasR [Myxococcus xanthus]; E=1e-69 COG: atoC; COG2204 AAA superfamily ATPases with N-terminal receiver; E=4e-71 aq_218_2; COG1221 NtrC family transcriptional regulators, ATPase; E=1e-63 TP0519; COG2204 AAA superfamily ATPases with N-terminal receiver; E=1e-63 PFAM: PF00498; FHA domain; E=6.7e-16 PF00158; Sigma-54 interaction domain; E=8.9e-140; ornithine decarboxylase inhibitor- sigma54 transciptional regulator 2150363 1790520 RB4179 Rhodopirellula baltica SH 1 ornithine decarboxylase inhibitor- sigma54 transciptional regulator NP_865942.1 2148090 R 243090 CDS NP_865943.1 32472949 1794350 2150524..2151873 1 NC_005027.1 signal peptide 2151873 1794350 RB4182 Rhodopirellula baltica SH 1 signal peptide NP_865943.1 2150524 D 243090 CDS NP_865944.1 32472950 1795459 2151951..2152220 1 NC_005027.1 hypothetical protein 2152220 1795459 RB4185 Rhodopirellula baltica SH 1 hypothetical protein NP_865944.1 2151951 D 243090 CDS NP_865945.1 32472951 1795957 complement(2152190..2156053) 1 NC_005027.1 PMID: 99426839 best DB hits: BLAST: gb:AAC16938.1; (AC002338) protein kinase [Arabidopsis; E=3e-14 ddbj:BAA83688.1; (AB011967) OsPK4 [Oryza sativa]; E=8e-14 gb:AAD03499.2; (AF035395) serinethreonine protein kinase PpkA; E=1e-12 COG: PA0074; COG0515 Serine/threonine protein kinases; E=2e-13 PFAM: PF00069; Protein kinase domain; E=2.3e-28; serine/threonine protein kinase PpkA 2156053 ppkA 1795957 ppkA Rhodopirellula baltica SH 1 serine/threonine protein kinase PpkA NP_865945.1 2152190 R 243090 CDS NP_865946.1 32472952 1790625 complement(2156128..2156295) 1 NC_005027.1 hypothetical protein 2156295 1790625 RB4193 Rhodopirellula baltica SH 1 hypothetical protein NP_865946.1 2156128 R 243090 CDS NP_865947.1 32472953 1794095 complement(2156524..2156685) 1 NC_005027.1 hypothetical protein 2156685 1794095 RB4194 Rhodopirellula baltica SH 1 hypothetical protein NP_865947.1 2156524 R 243090 CDS NP_865948.1 32472954 1793079 2156679..2157056 1 NC_005027.1 hypothetical protein 2157056 1793079 RB4195 Rhodopirellula baltica SH 1 hypothetical protein NP_865948.1 2156679 D 243090 CDS NP_865949.1 32472955 1792830 2157140..2157484 1 NC_005027.1 hypothetical protein 2157484 1792830 RB4196 Rhodopirellula baltica SH 1 hypothetical protein NP_865949.1 2157140 D 243090 CDS NP_865950.1 32472956 1796254 complement(2157383..2157721) 1 NC_005027.1 hypothetical protein 2157721 1796254 RB4197 Rhodopirellula baltica SH 1 hypothetical protein NP_865950.1 2157383 R 243090 CDS NP_865951.1 32472957 1795301 complement(2157738..2158172) 1 NC_005027.1 hypothetical protein 2158172 1795301 RB4199 Rhodopirellula baltica SH 1 hypothetical protein NP_865951.1 2157738 R 243090 CDS NP_865952.1 32472958 1792483 complement(2158153..2159034) 1 NC_005027.1 hypothetical protein 2159034 1792483 RB4201 Rhodopirellula baltica SH 1 hypothetical protein NP_865952.1 2158153 R 243090 CDS NP_865953.1 32472959 1795229 complement(2159073..2159675) 1 NC_005027.1 hypothetical protein 2159675 1795229 RB4203 Rhodopirellula baltica SH 1 hypothetical protein NP_865953.1 2159073 R 243090 CDS NP_865954.1 32472960 1791702 complement(2159672..2159851) 1 NC_005027.1 hypothetical protein 2159851 1791702 RB4204 Rhodopirellula baltica SH 1 hypothetical protein NP_865954.1 2159672 R 243090 CDS NP_865955.1 32472961 1794667 2159880..2160275 1 NC_005027.1 hypothetical protein 2160275 1794667 RB4205 Rhodopirellula baltica SH 1 hypothetical protein NP_865955.1 2159880 D 243090 CDS NP_865956.1 32472962 1790139 2160320..2160610 1 NC_005027.1 hypothetical protein 2160610 1790139 RB4206 Rhodopirellula baltica SH 1 hypothetical protein NP_865956.1 2160320 D 243090 CDS NP_865957.1 32472963 1796234 2160650..2160823 1 NC_005027.1 hypothetical protein 2160823 1796234 RB4208 Rhodopirellula baltica SH 1 hypothetical protein NP_865957.1 2160650 D 243090 CDS NP_865958.1 32472964 1791907 2160917..2161363 1 NC_005027.1 hypothetical protein 2161363 1791907 RB4210 Rhodopirellula baltica SH 1 hypothetical protein NP_865958.1 2160917 D 243090 CDS NP_865959.1 32472965 1791480 complement(2161348..2161641) 1 NC_005027.1 hypothetical protein 2161641 1791480 RB4211 Rhodopirellula baltica SH 1 hypothetical protein NP_865959.1 2161348 R 243090 CDS NP_865960.1 32472966 1791973 2161576..2162280 1 NC_005027.1 hypothetical protein 2162280 1791973 RB4213 Rhodopirellula baltica SH 1 hypothetical protein NP_865960.1 2161576 D 243090 CDS NP_865961.1 32472967 1791686 complement(2162210..2162542) 1 NC_005027.1 PMID: 3934047 best DB hits: BLAST: swissprot:P10427; YIM3_BPPH1 HYPOTHETICAL IMMUNITY REGION; E=0.28 pir:IMBP4; site-specific recombinase for integration and excision; E=0.28; immunity region protein 3 2162542 1791686 RB4215 Rhodopirellula baltica SH 1 immunity region protein 3 NP_865961.1 2162210 R 243090 CDS NP_865962.1 32472968 1793813 complement(2162544..2162774) 1 NC_005027.1 best DB hits: BLAST: pir:C71228; hypothetical protein PH0085 - Pyrococcus horikoshii; E=0.87; hypothetical protein 2162774 1793813 RB4216 Rhodopirellula baltica SH 1 hypothetical protein NP_865962.1 2162544 R 243090 CDS NP_865963.1 32472969 1796152 2162659..2162922 1 NC_005027.1 signal peptide 2162922 1796152 RB4217 Rhodopirellula baltica SH 1 signal peptide NP_865963.1 2162659 D 243090 CDS NP_865964.1 32472970 1792480 2162756..2163097 1 NC_005027.1 hypothetical protein 2163097 1792480 RB4218 Rhodopirellula baltica SH 1 hypothetical protein NP_865964.1 2162756 D 243090 CDS NP_865965.1 32472971 1791509 complement(2163081..2163305) 1 NC_005027.1 hypothetical protein 2163305 1791509 RB4219 Rhodopirellula baltica SH 1 hypothetical protein NP_865965.1 2163081 R 243090 CDS NP_865966.1 32472972 1795390 2163241..2163627 1 NC_005027.1 hypothetical protein 2163627 1795390 RB4220 Rhodopirellula baltica SH 1 hypothetical protein NP_865966.1 2163241 D 243090 CDS NP_865967.1 32472973 1791357 complement(2163714..2163875) 1 NC_005027.1 hypothetical protein 2163875 1791357 RB4222 Rhodopirellula baltica SH 1 hypothetical protein NP_865967.1 2163714 R 243090 CDS NP_865968.1 32472974 1795846 2163855..2164706 1 NC_005027.1 best DB hits: BLAST: gb:AAD03908.1; (AF079317) unknown [Sphingomonas aromaticivorans]; E=3e-05 pir:D70590; hypothetical protein Rv3226c - Mycobacterium; E=1e-04 gb:AAF97194.1; AF268611_18 (AF268611) unknown [uncultured marine; E=0.003 COG: Rv3226c; COG2135 Uncharacterized ACR; E=1e-05 PFAM: PF02586; Uncharacterized ACR, COG2135; E=8.4e-08; hypothetical protein 2164706 1795846 RB4223 Rhodopirellula baltica SH 1 hypothetical protein NP_865968.1 2163855 D 243090 CDS NP_865969.1 32472975 1793178 2164703..2165893 1 NC_005027.1 PMID: 7596361 best DB hits: BLAST: swissprot:Q47155; DINP_ECOLI DNA-DAMAGE-INDUCIBLE PROTEIN P; E=5e-54 gb:AAG54556.1; AE005201_9 (AE005201) damage-inducible protein P; E=1e-53 pir:A81861; impBmucB/samB family protein NMA1661 [imported] -; E=3e-52 COG: dinP; COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA; E=5e-55 VC2287; COG0389 Nucleotidyltransferase/DNA polymerase involved in; E=1e-51 UU437; COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA; E=1e-25 PFAM: PF00817; impB/mucB/samB family; E=5.9e-115; DNA-damage-inducible protein P 2165893 dinP 1793178 dinP Rhodopirellula baltica SH 1 DNA-damage-inducible protein P NP_865969.1 2164703 D 243090 CDS NP_865970.1 32472976 1792412 2165985..2166158 1 NC_005027.1 hypothetical protein 2166158 1792412 RB4227 Rhodopirellula baltica SH 1 hypothetical protein NP_865970.1 2165985 D 243090 CDS NP_865971.1 32472977 1794635 2166100..2166405 1 NC_005027.1 hypothetical protein 2166405 1794635 RB4228 Rhodopirellula baltica SH 1 hypothetical protein NP_865971.1 2166100 D 243090 CDS NP_865972.1 32472978 1791562 complement(2166595..2167854) 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB62702.1; (AL133422) hypothetical protein SCM1.44.; E=7e-37 pir:S74705; hypothetical protein slr1303 - Synechocystis sp. (strain; E=1e-20 pir:H70793; hypothetical protein Rv3703c - Mycobacterium; E=1e-19 COG: slr1303; COG1262 Uncharacterized BCR; E=1e-21; hypothetical protein 2167854 1791562 RB4229 Rhodopirellula baltica SH 1 hypothetical protein NP_865972.1 2166595 R 243090 CDS NP_865973.1 32472979 1793341 complement(2167788..2168783) 1 NC_005027.1 PMID: 97061201 best DB hits: BLAST: embl:CAC02633.1; (AL390114) possible hypothetical 35.4 Kd protein; E=1e-45 pir:S74850; hypothetical protein slr0865 - Synechocystis sp. (strain; E=1e-34 pir:F70793; hypothetical protein Rv3701c - Mycobacterium; E=2e-33; hypothetical protein 2168783 1793341 RB4230 Rhodopirellula baltica SH 1 hypothetical protein NP_865973.1 2167788 R 243090 CDS NP_865974.1 32472980 1795485 2168892..2169059 1 NC_005027.1 hypothetical protein 2169059 1795485 RB4232 Rhodopirellula baltica SH 1 hypothetical protein NP_865974.1 2168892 D 243090 CDS NP_865975.1 32472981 1796725 complement(2169112..2172021) 1 NC_005027.1 hypothetical protein 2172021 1796725 RB4233 Rhodopirellula baltica SH 1 hypothetical protein NP_865975.1 2169112 R 243090 CDS NP_865976.1 32472982 1792540 complement(2171936..2173615) 1 NC_005027.1 hypothetical protein 2173615 1792540 RB4239 Rhodopirellula baltica SH 1 hypothetical protein NP_865976.1 2171936 R 243090 CDS NP_865977.1 32472983 1794756 complement(2173612..2174172) 1 NC_005027.1 PMID: 3052291 PMID: 8052622 best DB hits: BLAST: pir:H75550; RNA polymerase sigma-E factor - Deinococcus radiodurans; E=4e-08 embl:CAB72200.1; (AL138851) RNA polymerase sigma factor; E=1e-06 swissprot:P45215; YE59_HAEIN PROBABLE RNA POLYMERASE SIGMA FACTOR; E=2e-06 COG: DR0180; COG1595 DNA-directed RNA polymerase specialized sigma; E=3e-09 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=2.3e-05; RNA polymerase sigma-E factor 2174172 1794756 RB4241 Rhodopirellula baltica SH 1 RNA polymerase sigma-E factor NP_865977.1 2173612 R 243090 CDS NP_865978.1 32472984 1794010 2174155..2174331 1 NC_005027.1 hypothetical protein 2174331 1794010 RB4243 Rhodopirellula baltica SH 1 hypothetical protein NP_865978.1 2174155 D 243090 CDS NP_865979.1 32472985 1793102 2174390..2174839 1 NC_005027.1 PMID: 11679351; signal peptide 2174839 1793102 RB4245 Rhodopirellula baltica SH 1 signal peptide NP_865979.1 2174390 D 243090 CDS NP_865980.1 32472986 1794865 2174799..2178953 1 NC_005027.1 PMID: 7899078 best DB hits: BLAST: pir:H83232; probable ATP-dependent helicase PA3297 [imported] -; E=0.0 pir:F82207; ATP-dependent helicase HrpA VC1382 [imported] - Vibrio; E=0.0 swissprot:P43329; HRPA_ECOLI ATP-DEPENDENT HELICASE HRPA -----; E=0.0 COG: PA3297; COG1643 HrpA-like helicases; E=0.0 PFAM: PF00005; ABC transporter; E=0.016 PF00270; DEAD/DEAH box helicase; E=0.66 PF00271; Helicase conserved C-terminal; E=1.3e-12; ATP-dependent helicase hrpA 2178953 hrpA 1794865 hrpA Rhodopirellula baltica SH 1 ATP-dependent helicase hrpA NP_865980.1 2174799 D 243090 CDS NP_865981.1 32472987 1796231 2178958..2179545 1 NC_005027.1 PMID: 21595285 best DB hits: BLAST: pir:E69833; conserved hypothetical protein yhjE - Bacillus subtilis; E=0.65; hypothetical protein 2179545 1796231 RB4248 Rhodopirellula baltica SH 1 hypothetical protein NP_865981.1 2178958 D 243090 CDS NP_865982.1 32472988 1794555 2179578..2179745 1 NC_005027.1 hypothetical protein 2179745 1794555 RB4250 Rhodopirellula baltica SH 1 hypothetical protein NP_865982.1 2179578 D 243090 CDS NP_865983.1 32472989 1791074 complement(2179990..2180118) 1 NC_005027.1 hypothetical protein 2180118 1791074 RB4251 Rhodopirellula baltica SH 1 hypothetical protein NP_865983.1 2179990 R 243090 CDS NP_865984.1 32472990 1791655 complement(2180073..2180222) 1 NC_005027.1 hypothetical protein 2180222 1791655 RB4252 Rhodopirellula baltica SH 1 hypothetical protein NP_865984.1 2180073 R 243090 CDS NP_865985.1 32472991 1791148 complement(2180192..2180806) 1 NC_005027.1 hypothetical protein 2180806 1791148 RB4255 Rhodopirellula baltica SH 1 hypothetical protein NP_865985.1 2180192 R 243090 CDS NP_865986.1 32472992 1790637 2180303..2181379 1 NC_005027.1 best DB hits: BLAST: gb:AAB41030.2; (U23947) LipA [Mycoplasma pulmonis]; E=0.31 gb:AAC55162.1; (U60315) MC034L [Molluscum contagiosum virus; E=0.69 pir:T02318; hypothetical protein F13P17.14 - Arabidopsis thaliana; E=0.82; signal peptide 2181379 1790637 RB4256 Rhodopirellula baltica SH 1 signal peptide NP_865986.1 2180303 D 243090 CDS NP_865987.1 32472993 1791250 complement(2180966..2181475) 1 NC_005027.1 hypothetical protein 2181475 1791250 RB4258 Rhodopirellula baltica SH 1 hypothetical protein NP_865987.1 2180966 R 243090 CDS NP_865988.1 32472994 1796317 2181412..2181696 1 NC_005027.1 hypothetical protein 2181696 1796317 RB4259 Rhodopirellula baltica SH 1 hypothetical protein NP_865988.1 2181412 D 243090 CDS NP_865989.1 32472995 1792226 2181703..2182491 1 NC_005027.1 hypothetical protein 2182491 1792226 RB4260 Rhodopirellula baltica SH 1 hypothetical protein NP_865989.1 2181703 D 243090 CDS NP_865990.1 32472996 1790098 complement(2182569..2182739) 1 NC_005027.1 hypothetical protein 2182739 1790098 RB4262 Rhodopirellula baltica SH 1 hypothetical protein NP_865990.1 2182569 R 243090 CDS NP_865991.1 32472997 1789900 complement(2182795..2183157) 1 NC_005027.1 signal peptide 2183157 1789900 RB4264 Rhodopirellula baltica SH 1 signal peptide NP_865991.1 2182795 R 243090 CDS NP_865992.1 32472998 1789992 2183250..2183414 1 NC_005027.1 hypothetical protein 2183414 1789992 RB4266 Rhodopirellula baltica SH 1 hypothetical protein NP_865992.1 2183250 D 243090 CDS NP_865993.1 32472999 1795195 complement(2183505..2184137) 1 NC_005027.1 PMID: 11065374 best DB hits: BLAST: ddbj:BAA82053.1; (AB022175) a-type carbonic anhydrase; E=2e-20 pir:F82479; carbonic anhydrase VCA0274 [imported] - Vibrio cholerae; E=6e-18 swissprot:P94170; CAH_ANASP CARBONIC ANHYDRASE PRECURSOR; E=4e-16 COG: VCA0274; COG3338 Carbonic anhydrase; E=6e-19 PFAM: PF00194; Eukaryotic-type carbonic anhy; E=4.1e-15; A-type carbonic anhydrase 2184137 1795195 RB4267 Rhodopirellula baltica SH 1 A-type carbonic anhydrase NP_865993.1 2183505 R 243090 CDS NP_865994.1 32473000 1793878 complement(2184201..2185049) 1 NC_005027.1 PMID: 1429718 PMID: 1346764 best DB hits: BLAST: swissprot:P80057; GSEP_BACLI GLUTAMYL ENDOPEPTIDASE PRECURSOR; E=9e-04 gb:AAB21460.1; glutamic acid specific endopeptidase, GSE=serine; E=9e-04; glutamyl endopeptidase 2185049 1793878 RB4269 Rhodopirellula baltica SH 1 glutamyl endopeptidase NP_865994.1 2184201 R 243090 CDS NP_865995.1 32473001 1795495 complement(2185118..2187721) 1 NC_005027.1 PMID: 9163424 best DB hits: BLAST: swissprot:P55440; Y4FB_RHISN HYPOTHETICAL 73.7 KD PROTEIN Y4FB; E=8e-65 pir:D75375; conserved hypothetical protein - Deinococcus radiodurans; E=1e-41 pir:C83479; probable proteinase PA1327 [imported] - Pseudomonas; E=3e-31 COG: DR1599; COG0265 Trypsin-like serine proteases, typically; E=1e-42 PA1327; COG1864 DNA/RNA endonuclease G, NUC1; E=3e-32 PFAM: PF00089; Trypsin; E=0.24 PF01727; Domain of unknown function DUF; E=0.0043 PF00089; Trypsin; E=0.033; proteinase 2187721 1795495 RB4270 Rhodopirellula baltica SH 1 proteinase NP_865995.1 2185118 R 243090 CDS NP_865996.1 32473002 1796677 complement(2187652..2190558) 1 NC_005027.1 hypothetical protein 2190558 1796677 RB4271 Rhodopirellula baltica SH 1 hypothetical protein NP_865996.1 2187652 R 243090 CDS NP_865997.1 32473003 1793275 complement(2190545..2191870) 1 NC_005027.1 hypothetical protein 2191870 1793275 RB4272 Rhodopirellula baltica SH 1 hypothetical protein NP_865997.1 2190545 R 243090 CDS NP_865998.1 32473004 1795382 complement(2191875..2193431) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAA77283.1; (AB013135) DyP [Galactomyces geotrichum]; E=4e-22 gb:AAB58908.1; (U77073) peroxidase [Polyporaceae sp.]; E=8e-22 pir:D75610; probable peroxidase - Deinococcus radiodurans (strain; E=8e-18 COG: DRA0145; COG2837 Predicted iron-dependent peroxidase; E=7e-19; peroxidase 2193431 1795382 RB4273 Rhodopirellula baltica SH 1 peroxidase NP_865998.1 2191875 R 243090 CDS NP_865999.1 32473005 1795653 complement(2193465..2195783) 1 NC_005027.1 best DB hits: BLAST: pir:T36192; hypothetical protein SCE29.13c - Streptomyces coelicolor; E=3e-04; hypothetical protein 2195783 1795653 RB4275 Rhodopirellula baltica SH 1 hypothetical protein NP_865999.1 2193465 R 243090 CDS NP_866000.1 32473006 1793848 2195832..2195945 1 NC_005027.1 hypothetical protein 2195945 1793848 RB4276 Rhodopirellula baltica SH 1 hypothetical protein NP_866000.1 2195832 D 243090 CDS NP_866001.1 32473007 1795042 2196029..2196151 1 NC_005027.1 hypothetical protein 2196151 1795042 RB4277 Rhodopirellula baltica SH 1 hypothetical protein NP_866001.1 2196029 D 243090 CDS NP_866002.1 32473008 1794248 complement(2196122..2198887) 1 NC_005027.1 PMID: 11266614 best DB hits: BLAST: embl:CAC01644.1; (AL391072) hypothetical protein SC9A4.17; E=4e-34 embl:CAB56738.1; (AL121600) membrane protein; E=1e-22 pir:D83260; hypothetical protein PA3080 [imported] - Pseudomonas; E=2e-08 PFAM: PF02012; BNR repeat; E=0.11; hypothetical protein 2198887 1794248 RB4278 Rhodopirellula baltica SH 1 hypothetical protein NP_866002.1 2196122 R 243090 CDS NP_866003.1 32473009 1792573 complement(2199019..2199894) 1 NC_005027.1 PMID: 1701851 PMID: 7657606 best DB hits: BLAST: swissprot:P24347; MM11_HUMAN STROMELYSIN-3 PRECURSOR (MATRIX; E=0.042 embl:CAA40918.1; (X57766) stromelysin-3 precursor [Homo sapiens]; E=0.051 ref:XP_009873.1; matrix metalloproteinase 11 (stromelysin 3); E=0.051; matrix metalloproteinase-11 2199894 1792573 RB4282 Rhodopirellula baltica SH 1 matrix metalloproteinase-11 NP_866003.1 2199019 R 243090 CDS NP_866004.1 32473010 1794426 complement(2199963..2201462) 1 NC_005027.1 PMID: 20437337 best DB hits: BLAST: pir:B83347; hypothetical protein PA2392 [imported] - Pseudomonas; E=1e-50 PFAM: PF02022; Integrase Zinc binding domain; E=0.25; hypothetical protein 2201462 1794426 RB4283 Rhodopirellula baltica SH 1 hypothetical protein NP_866004.1 2199963 R 243090 CDS NP_866005.1 32473011 1790345 2201461..2201634 1 NC_005027.1 hypothetical protein 2201634 1790345 RB4284 Rhodopirellula baltica SH 1 hypothetical protein NP_866005.1 2201461 D 243090 CDS NP_866006.1 32473012 1792169 complement(2201611..2204136) 1 NC_005027.1 hypothetical protein 2204136 1792169 RB4285 Rhodopirellula baltica SH 1 hypothetical protein NP_866006.1 2201611 R 243090 CDS NP_866007.1 32473013 1794218 complement(2204140..2204865) 1 NC_005027.1 PMID: 20437337 best DB hits: BLAST: pir:F83498; hypothetical protein PA1166 [imported] - Pseudomonas; E=0.035 COG: PA1166; COG0412 Dienelactone hydrolase and related enzymes; E=0.003 PFAM: PF01738; Dienelactone hydrolase; E=0.0023; hypothetical protein 2204865 1794218 RB4286 Rhodopirellula baltica SH 1 hypothetical protein NP_866007.1 2204140 R 243090 CDS NP_866008.1 32473014 1793934 complement(2204880..2206004) 1 NC_005027.1 best DB hits: BLAST: gb:AAG38844.1; (AY010120) reductasehalogenase; E=1e-11 pir:T30590; alkylhalidase homolog - Amycolatopsis orientalis -----; E=2e-08 pir:T34627; probable electron transfer oxidoreductase - Streptomyces; E=2e-06 COG: Rv1751; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related; E=8e-05 Ta0326; COG0644 Dehydrogenases (flavoproteins); E=0.002 BH1851; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and; E=0.002 PFAM: PF01134; Glucose inhibited division prot; E=0.11 PF00732; GMC oxidoreductases; E=0.0013 PF01266; D-amino acid oxidase; E=0.0085; alkylhalidase-like protein 2206004 1793934 RB4288 Rhodopirellula baltica SH 1 alkylhalidase-like protein NP_866008.1 2204880 R 243090 CDS NP_866009.1 32473015 1793218 complement(2206010..2207593) 1 NC_005027.1 PMID: 11259647 best DB hits: BLAST: swissprot:O59930; LEU3_PHACH 3-ISOPROPYLMALATE DEHYDROGENASE; E=0.38; 3-isopropylmalate dehydrogenase 2207593 1793218 RB4289 Rhodopirellula baltica SH 1 3-isopropylmalate dehydrogenase NP_866009.1 2206010 R 243090 CDS NP_866010.1 32473016 1796731 complement(2207648..2210527) 1 NC_005027.1 best DB hits: BLAST: pir:A58519; hypothetical 345 protein - Streptomyces coelicolor; E=3e-57 embl:CAC16730.1; (AL450289) conserved hypothetical protein; E=3e-50 gb:AAC59865.1; (U37373) up-regulated by thyroid hormone in; E=1e-44 COG: slr1608; COG2133 Glucose/sorbosone dehydrogenases; E=2e-16; hypothetical protein 2210527 1796731 RB4292 Rhodopirellula baltica SH 1 hypothetical protein NP_866010.1 2207648 R 243090 CDS NP_866011.1 32473017 1795140 complement(2210560..2212074) 1 NC_005027.1 PMID: 9510026 best DB hits: BLAST: gb:AAB92243.1; (AF035381) ovoperoxidase [Lytechinus variegatus]; E=4e-08 pir:T24502; hypothetical protein T06D8.10 - Caenorhabditis elegans; E=4e-07 gb:AAF53674.2; (AE003659) CG10211 gene product [Drosophila; E=2e-06; ovoperoxidase 2212074 1795140 RB4293 Rhodopirellula baltica SH 1 ovoperoxidase NP_866011.1 2210560 R 243090 CDS NP_866012.1 32473018 1792185 complement(2212149..2213069) 1 NC_005027.1 PMID: 10910347 PMID: 8325504 best DB hits: BLAST: pir:C82841; cysteine proteinase XF0156 [imported] - Xylella; E=1e-13 embl:CAC18648.1; (AJ302013) cathepsin B-like cysteine protease 3; E=0.006 pir:H71456; probable pyrolysin (EC 3.4.-.-) homolog PH0310; E=0.086 PFAM: PF00112; Papain family cysteine protease; E=0.019; cysteine proteinase 2213069 1792185 RB4294 Rhodopirellula baltica SH 1 cysteine proteinase NP_866012.1 2212149 R 243090 CDS NP_866013.1 32473019 1792735 complement(2213209..2213931) 1 NC_005027.1 hypothetical protein 2213931 1792735 RB4296 Rhodopirellula baltica SH 1 hypothetical protein NP_866013.1 2213209 R 243090 CDS NP_866014.1 32473020 1791302 2213903..2214127 1 NC_005027.1 hypothetical protein 2214127 1791302 RB4297 Rhodopirellula baltica SH 1 hypothetical protein NP_866014.1 2213903 D 243090 CDS NP_866015.1 32473021 1795358 complement(2214175..2214720) 1 NC_005027.1 hypothetical protein 2214720 1795358 RB4298 Rhodopirellula baltica SH 1 hypothetical protein NP_866015.1 2214175 R 243090 CDS NP_866016.1 32473022 1793490 2214533..2214823 1 NC_005027.1 PMID: 11756688 best DB hits: BLAST: gb:AAG58100.1; AE005527_3 (AE005527) unknown protein encoded by; E=0.003 gb:AAG53987.1; AF327445_1 (AF327445) transposase A; E=0.011 gb:AAF28119.1; AF153317_15 (AF153317) InsA [Shigella; E=0.026 PFAM: PF01381; Helix-turn-helix; E=0.53 PF01527; Transposase; E=1.5e-15; transposase 2214823 1793490 RB4299 Rhodopirellula baltica SH 1 transposase NP_866016.1 2214533 D 243090 CDS NP_866017.1 32473023 1790125 2214826..2215704 1 NC_005027.1 PMID: 10594830 best DB hits: BLAST: gb:AAA88919.1; (U13013) ORFB [Leptospira interrogans]; E=3e-47 gb:AAA88916.1; (U13012) ORFB [Leptospira interrogans]; E=1e-46 gb:AAC05649.1; (AF038931) probable transposase-related protein; E=1e-45 COG: DRB0019.2; COG2801 transposase; E=1e-35 PFAM: PF00665; Integrase core domain; E=4.8e-40; hypothetical protein 2215704 1790125 RB4300 Rhodopirellula baltica SH 1 hypothetical protein NP_866017.1 2214826 D 243090 CDS NP_866018.1 32473024 1791482 complement(2215750..2216085) 1 NC_005027.1 hypothetical protein 2216085 1791482 RB4301 Rhodopirellula baltica SH 1 hypothetical protein NP_866018.1 2215750 R 243090 CDS NP_866019.1 32473025 1794662 2216079..2216627 1 NC_005027.1 hypothetical protein 2216627 1794662 RB4302 Rhodopirellula baltica SH 1 hypothetical protein NP_866019.1 2216079 D 243090 CDS NP_866020.1 32473026 1792098 2216575..2217969 1 NC_005027.1 PMID: 11016950 best DB hits: BLAST: gb:AAG18661.1; (AE004971) Vng0021h [Halobacterium sp. NRC-1]; E=8e-22 gb:AAG18694.1; (AE004974) Vng0056h [Halobacterium sp. NRC-1]; E=8e-20 pir:T44318; transposase homolog [imported] - Vibrio cholerae -----; E=4e-15; transposase 2217969 1792098 RB4303 Rhodopirellula baltica SH 1 transposase NP_866020.1 2216575 D 243090 CDS NP_866021.1 32473027 1790880 complement(2218057..2218530) 1 NC_005027.1 hypothetical protein 2218530 1790880 RB4304 Rhodopirellula baltica SH 1 hypothetical protein NP_866021.1 2218057 R 243090 CDS NP_866022.1 32473028 1794115 complement(2218595..2219737) 1 NC_005027.1 PMID: 9371463 PMID: 10783239 best DB hits: BLAST: pir:F69192; conserved hypothetical protein MTH695 - Methanobacterium; E=2e-09 pir:B75516; conserved hypothetical protein - Deinococcus radiodurans; E=7e-04 pir:H82146; conserved hypothetical protein VC1882 [imported] -; E=0.007 COG: MTH695; COG0577 Predicted permease; E=2e-10 PFAM: PF02687; Predicted permease; E=1.5e-21; hypothetical protein 2219737 1794115 RB4305 Rhodopirellula baltica SH 1 hypothetical protein NP_866022.1 2218595 R 243090 CDS NP_866023.1 32473029 1794771 complement(2219834..2221207) 1 NC_005027.1 PMID: 11292750 best DB hits: BLAST: swissprot:P03835; YI41_ECOLI INSERTION ELEMENT IS4 HYPOTHETICAL; E=0.030 embl:CAA57483.1; (X81894) ORF [Enterobacter agglomerans]; E=0.064 COG: yi41; COG3385 Predicted transposase; E=0.003; transposase 2221207 1794771 RB4306 Rhodopirellula baltica SH 1 transposase NP_866023.1 2219834 R 243090 CDS NP_866024.1 32473030 1794171 complement(2221222..2221461) 1 NC_005027.1 hypothetical protein 2221461 1794171 RB4308 Rhodopirellula baltica SH 1 hypothetical protein NP_866024.1 2221222 R 243090 CDS NP_866025.1 32473031 1793364 complement(2221424..2222125) 1 NC_005027.1 PMID: 3288195 PMID: 3762695 best DB hits: BLAST: embl:CAA11724.1; (AJ223978) ABC transporter, YvrO; E=7e-48 gb:AAB89781.1; (AE001001) ABC transporter ATP-binding protein; E=4e-47 embl:CAC21614.1; (AL512667) ABC transporter ATP-binding; E=6e-47 COG: AF1469; COG1136 ABC-type (unclassified) transport system, ATPase; E=4e-48 PFAM: PF00005; ABC transporter; E=1.7e-57; ABC transporter ATP-binding protein 2222125 1793364 RB4309 Rhodopirellula baltica SH 1 ABC transporter ATP-binding protein NP_866025.1 2221424 R 243090 CDS NP_866026.1 32473032 1790080 complement(2222125..2223684) 1 NC_005027.1 PMID: 9301333 PMID: 2249654 best DB hits: BLAST: swissprot:P32716; YJCR_ECOLI HYPOTHETICAL 36.9 KDA PROTEIN IN; E=3e-04 gb:AAG59280.1; AE005641_5 (AE005641) membrane protein; E=4e-04 pir:S76813; hypothetical protein sll1481 - Synechocystis sp. (strain; E=0.002 COG: yjcR; COG1566 Multidrug resistance efflux pump; E=2e-05 sll1481; COG0845 Membrane-fusion protein; E=2e-04 PA5159; COG1566 Multidrug resistance efflux pump; E=4e-04 PFAM: PF02017; CIDE-N domain; E=0.19 PF00364; Biotin-requiring enzyme; E=0.018; hypothetical protein 2223684 1790080 RB4310 Rhodopirellula baltica SH 1 hypothetical protein NP_866026.1 2222125 R 243090 CDS NP_866027.1 32473033 1791675 complement(2223687..2224205) 1 NC_005027.1 signal peptide 2224205 1791675 RB4311 Rhodopirellula baltica SH 1 signal peptide NP_866027.1 2223687 R 243090 CDS NP_866028.1 32473034 1790398 complement(2224235..2225476) 1 NC_005027.1 PMID: 12024217 best DB hits: BLAST: pir:F69192; conserved hypothetical protein MTH695 - Methanobacterium; E=0.005 COG: MTH695; COG0577 Predicted permease; E=5e-04 PFAM: PF02687; Predicted permease; E=1.4e-20; hypothetical protein 2225476 1790398 RB4314 Rhodopirellula baltica SH 1 hypothetical protein NP_866028.1 2224235 R 243090 CDS NP_866029.1 32473035 1792811 complement(2225445..2225828) 1 NC_005027.1 signal peptide 2225828 1792811 RB4317 Rhodopirellula baltica SH 1 signal peptide NP_866029.1 2225445 R 243090 CDS NP_866030.1 32473036 1794466 2226114..2226611 1 NC_005027.1 best DB hits: BLAST: gb:AAF50472.1; (AE003556) CG7986 gene product [alt 2] [Drosophila; E=0.38; hypothetical protein 2226611 1794466 RB4320 Rhodopirellula baltica SH 1 hypothetical protein NP_866030.1 2226114 D 243090 CDS NP_866031.1 32473037 1795414 2226866..2228239 1 NC_005027.1 PMID: 11292750 best DB hits: BLAST: swissprot:P03835; YI41_ECOLI INSERTION ELEMENT IS4 HYPOTHETICAL; E=0.030 embl:CAA57483.1; (X81894) ORF [Enterobacter agglomerans]; E=0.064 COG: yi41; COG3385 Predicted transposase; E=0.003; transposase 2228239 1795414 RB4322 Rhodopirellula baltica SH 1 transposase NP_866031.1 2226866 D 243090 CDS NP_866032.1 32473038 1796293 complement(2228307..2228504) 1 NC_005027.1 hypothetical protein 2228504 1796293 RB4324 Rhodopirellula baltica SH 1 hypothetical protein NP_866032.1 2228307 R 243090 CDS NP_866033.1 32473039 1790404 2228477..2228623 1 NC_005027.1 hypothetical protein 2228623 1790404 RB4325 Rhodopirellula baltica SH 1 hypothetical protein NP_866033.1 2228477 D 243090 CDS NP_866034.1 32473040 1793484 complement(2228606..2230546) 1 NC_005027.1 PMID: 9661020 best DB hits: BLAST: gb:AAG27731.1; AF312031_1 (AF312031) multi-drug efflux transporter; E=8e-12 pir:B83476; probable transporter PA1361 [imported] - Pseudomonas; E=1e-11 pir:D81950; probable transmembrane efflux protein NMA1022 [imported]; E=8e-10 COG: PA1361; COG0534 Na+-driven multidrug efflux pump; E=1e-12 PFAM: PF01554; Uncharacterized membrane protein fam; E=0.0072; multidrug ABC transporter 2230546 1793484 RB4327 Rhodopirellula baltica SH 1 multidrug ABC transporter NP_866034.1 2228606 R 243090 CDS NP_866035.1 32473041 1792797 2230615..2231700 1 NC_005027.1 best DB hits: BLAST: pir:S75877; hypothetical protein slr1166 - Synechocystis sp. (strain; E=1e-14 pir:A75033; probable hexosyltransferase (EC 2.4.1.-) PAB0827; E=2e-09 pir:D72511; probable hexosyltransferase (EC 2.4.1.-) APE2066; E=5e-09 COG: slr1166; COG0438 Predicted glycosyltransferases; E=1e-15 PAB2292; COG0297 Glycogen synthase; E=4e-05 BH1683; COG0438 Predicted glycosyltransferases; E=5e-05 PFAM: PF00534; Glycosyl transferases group 1; E=2.1e-12; galactosyltransferase 2231700 1792797 RB4333 Rhodopirellula baltica SH 1 galactosyltransferase NP_866035.1 2230615 D 243090 CDS NP_866036.1 32473042 1795361 2231697..2232815 1 NC_005027.1 hypothetical protein 2232815 1795361 RB4336 Rhodopirellula baltica SH 1 hypothetical protein NP_866036.1 2231697 D 243090 CDS NP_866037.1 32473043 1793425 2232812..2233672 1 NC_005027.1 best DB hits: BLAST: swissprot:P39614; YWDF_BACSU HYPOTHETICAL 30.6 KDA PROTEIN IN; E=0.80 PFAM: PF00535; Glycosyl transferase; E=4.7e-07; glycosyl transferase 2233672 1793425 RB4337 Rhodopirellula baltica SH 1 glycosyl transferase NP_866037.1 2232812 D 243090 CDS NP_866038.1 32473044 1794914 complement(2233636..2233809) 1 NC_005027.1 hypothetical protein 2233809 1794914 RB4338 Rhodopirellula baltica SH 1 hypothetical protein NP_866038.1 2233636 R 243090 CDS NP_866039.1 32473045 1797001 complement(2233917..2234846) 1 NC_005027.1 PMID: 11759840 best DB hits: BLAST: embl:CAB93418.1; (AL357524) transposase [Streptomyces; E=0.60; transposase 2234846 1797001 RB4340 Rhodopirellula baltica SH 1 transposase NP_866039.1 2233917 R 243090 CDS NP_866040.1 32473046 1792279 2234849..2235178 1 NC_005027.1 hypothetical protein 2235178 1792279 RB4341 Rhodopirellula baltica SH 1 hypothetical protein NP_866040.1 2234849 D 243090 CDS NP_866041.1 32473047 1792344 complement(2235163..2235597) 1 NC_005027.1 hypothetical protein 2235597 1792344 RB4343 Rhodopirellula baltica SH 1 hypothetical protein NP_866041.1 2235163 R 243090 CDS NP_866042.1 32473048 1797002 2235735..2236205 1 NC_005027.1 best DB hits: BLAST: pir:A83374; hypothetical protein PA2169 [imported] - Pseudomonas; E=6e-14; hypothetical protein 2236205 1797002 RB4347 Rhodopirellula baltica SH 1 hypothetical protein NP_866042.1 2235735 D 243090 CDS NP_866043.1 32473049 1792286 complement(2236190..2236372) 1 NC_005027.1 hypothetical protein 2236372 1792286 RB4348 Rhodopirellula baltica SH 1 hypothetical protein NP_866043.1 2236190 R 243090 CDS NP_866044.1 32473050 1795642 complement(2236216..2236377) 1 NC_005027.1 hypothetical protein 2236377 1795642 RB4349 Rhodopirellula baltica SH 1 hypothetical protein NP_866044.1 2236216 R 243090 CDS NP_866045.1 32473051 1796615 2236345..2236698 1 NC_005027.1 hypothetical protein 2236698 1796615 RB4350 Rhodopirellula baltica SH 1 hypothetical protein NP_866045.1 2236345 D 243090 CDS NP_866046.1 32473052 1793402 complement(2236824..2237279) 1 NC_005027.1 hypothetical protein 2237279 1793402 RB4352 Rhodopirellula baltica SH 1 hypothetical protein NP_866046.1 2236824 R 243090 CDS NP_866047.1 32473053 1792529 complement(2237331..2237771) 1 NC_005027.1 hypothetical protein 2237771 1792529 RB4353 Rhodopirellula baltica SH 1 hypothetical protein NP_866047.1 2237331 R 243090 CDS NP_866048.1 32473054 1796903 complement(2237810..2238277) 1 NC_005027.1 hypothetical protein 2238277 1796903 RB4354 Rhodopirellula baltica SH 1 hypothetical protein NP_866048.1 2237810 R 243090 CDS NP_866049.1 32473055 1791623 complement(2238462..2238932) 1 NC_005027.1 hypothetical protein 2238932 1791623 RB4356 Rhodopirellula baltica SH 1 hypothetical protein NP_866049.1 2238462 R 243090 CDS NP_866050.1 32473056 1794748 2238609..2239094 1 NC_005027.1 hypothetical protein 2239094 1794748 RB4357 Rhodopirellula baltica SH 1 hypothetical protein NP_866050.1 2238609 D 243090 CDS NP_866051.1 32473057 1795817 complement(2239103..2239474) 1 NC_005027.1 hypothetical protein 2239474 1795817 RB4358 Rhodopirellula baltica SH 1 hypothetical protein NP_866051.1 2239103 R 243090 CDS NP_866052.1 32473058 1797074 complement(2239605..2240075) 1 NC_005027.1 hypothetical protein 2240075 1797074 RB4360 Rhodopirellula baltica SH 1 hypothetical protein NP_866052.1 2239605 R 243090 CDS NP_866053.1 32473059 1790311 complement(2240090..2240206) 1 NC_005027.1 hypothetical protein 2240206 1790311 RB4361 Rhodopirellula baltica SH 1 hypothetical protein NP_866053.1 2240090 R 243090 CDS NP_866054.1 32473060 1791008 complement(2240215..2240655) 1 NC_005027.1 hypothetical protein 2240655 1791008 RB4362 Rhodopirellula baltica SH 1 hypothetical protein NP_866054.1 2240215 R 243090 CDS NP_866055.1 32473061 1795767 complement(2240636..2240812) 1 NC_005027.1 signal peptide 2240812 1795767 RB4364 Rhodopirellula baltica SH 1 signal peptide NP_866055.1 2240636 R 243090 CDS NP_866056.1 32473062 1795500 complement(2240812..2241291) 1 NC_005027.1 PMID: 0009611225 PMID: 0010550052 best DB hits: BLAST: pir:E70385; conserved hypothetical protein aq_987 - Aquifex aeolicus; E=6e-09 pir:D72545; hypothetical protein APE1648 - Aeropyrum pernix (strain; E=4e-06 pir:H70517; probable lppD protein - Mycobacterium tuberculosis; E=1e-05 COG: aq_987; COG2110 Uncharacterized ACR related to the C-terminal domain; E=5e-10 APE1648; COG2110 Uncharacterized ACR related to the C-terminal; E=4e-07 ymdB; COG2110 Uncharacterized ACR related to the C-terminal domain; E=4e-06 PFAM: PF01661; Appr-1-p processing enzyme family; E=9.4e-18; hypothetical protein 2241291 1795500 RB4366 Rhodopirellula baltica SH 1 hypothetical protein NP_866056.1 2240812 R 243090 CDS NP_866057.1 32473063 1796916 complement(2241431..2241850) 1 NC_005027.1 hypothetical protein 2241850 1796916 RB4369 Rhodopirellula baltica SH 1 hypothetical protein NP_866057.1 2241431 R 243090 CDS NP_866058.1 32473064 1793303 complement(2241982..2242506) 1 NC_005027.1 hypothetical protein 2242506 1793303 RB4371 Rhodopirellula baltica SH 1 hypothetical protein NP_866058.1 2241982 R 243090 CDS NP_866059.1 32473065 1791511 complement(2242534..2242863) 1 NC_005027.1 hypothetical protein 2242863 1791511 RB4373 Rhodopirellula baltica SH 1 hypothetical protein NP_866059.1 2242534 R 243090 CDS NP_866060.1 32473066 1791820 complement(2242933..2252103) 1 NC_005027.1 best DB hits: BLAST: pir:S74915; extracellular nuclease - Synechocystis sp. (strain PCC; E=0.005 pir:C81675; polymorphic membrane protein BC family TC0694; E=0.10 COG: sll0656_1; COG3204 Uncharacterized BCR; E=0.002 PFAM: PF00404; Dockerin type I repeat; E=0.25; extracellular nuclease 2252103 1791820 RB4375 Rhodopirellula baltica SH 1 extracellular nuclease NP_866060.1 2242933 R 243090 CDS NP_866061.1 32473067 1792386 complement(2252262..2253743) 1 NC_005027.1 PMID: 9358059 best DB hits: BLAST: gb:AAB26985.1; (L48340) catalase [Methylobacterium extorquens]; E=0.0 swissprot:Q59714; CATA_PSEPU CATALASE ----- gb: AAB88219.1; E=1e-152 swissprot:P48062; CATA_BORPE CATALASE ----- pir: S60757; E=1e-152 COG: PA4236; COG0753 Catalase; E=1e-153 PFAM: PF01334; Bacterioferritin; E=0.24 PF00199; Catalase; E=1.7e-261; catalase 2253743 katA 1792386 katA Rhodopirellula baltica SH 1 catalase NP_866061.1 2252262 R 243090 CDS NP_866062.1 32473068 1795308 complement(2253830..2255017) 1 NC_005027.1 best DB hits: BLAST: embl:CAB83202.1; (AJ277117) membrane protein; E=4e-30 pir:H82825; transport protein XF0281 [imported] - Xylella fastidiosa; E=4e-28 swissprot:O51039; Y006_BORBU HYPOTHETICAL PROTEIN BB0006 -----; E=2e-13 COG: XF0281; COG0628 Predicted permease; E=4e-29 PFAM: PF01594; Domain of unknown function DUF20; E=2.7e-06; hypothetical protein 2255017 1795308 RB4377 Rhodopirellula baltica SH 1 hypothetical protein NP_866062.1 2253830 R 243090 CDS NP_866063.1 32473069 1794894 complement(2255014..2255166) 1 NC_005027.1 hypothetical protein 2255166 1794894 RB4378 Rhodopirellula baltica SH 1 hypothetical protein NP_866063.1 2255014 R 243090 CDS NP_866064.1 32473070 1794775 complement(2255442..2255621) 1 NC_005027.1 hypothetical protein 2255621 1794775 RB4381 Rhodopirellula baltica SH 1 hypothetical protein NP_866064.1 2255442 R 243090 CDS NP_866065.1 32473071 1789927 complement(2255618..2257285) 1 NC_005027.1 PMID: 6350601 PMID: 89056708 PMID: 94237165 best DB hits: BLAST: swissprot:P55709; Y4YA_RHISN HYPOTHETICAL 49.9 KD PROTEIN Y4YA; E=3e-40 gb:AAG45731.1; AF229441_2 (AF229441) y4yA [Sinorhizobium fredii]; E=3e-40 gb:AAG45729.1; AF229440_2 (AF229440) y4yA [Sinorhizobium fredii]; E=3e-33 COG: aq_728; COG0019 Diaminopimelate decarboxylase; E=7e-08 PA4839; COG1166 Arginine decarboxylase (spermidine biosynthesis); E=5e-05 XF1116_2; COG0019 Diaminopimelate decarboxylase; E=5e-05 PFAM: PF02784; Pyridoxal-dependent decarboxyla; E=5.9e-08; diaminopimelate decarboxylase 2257285 1789927 RB4382 Rhodopirellula baltica SH 1 diaminopimelate decarboxylase NP_866065.1 2255618 R 243090 CDS NP_866066.1 32473072 1792951 complement(2257131..2258768) 1 NC_005027.1 best DB hits: BLAST: gb:AAG56655.1; AE005390_2 (AE005390) orf, hypothetical protein; E=5e-05 swissprot:P77148; YDHS_ECOLI HYPOTHETICAL 60.8 KDA PROTEIN IN; E=1e-04; hypothetical protein 2258768 1792951 RB4383 Rhodopirellula baltica SH 1 hypothetical protein NP_866066.1 2257131 R 243090 CDS NP_866067.1 32473073 1793264 complement(2258765..2259814) 1 NC_005027.1 PMID: 93345669 best DB hits: BLAST: swissprot:Q44004; CYSM_ALCEU CYSTEINE SYNTHASE (O-ACETYLSERINE; E=2e-35 pir:T43792; cysteine synthase (EC 4.2.99.8) cysK [similarity] -; E=1e-31 pir:H81161; probable cysteine synthase (EC 4.2.99.8) NMA0974; E=3e-31 COG: NMB0763; COG0031 Cysteine synthase; E=2e-32 PFAM: PF00291; Pyridoxal-phosphate dependent enzyme; E=9.2e-57; cysteine synthase 2259814 1793264 RB4386 Rhodopirellula baltica SH 1 cysteine synthase NP_866067.1 2258765 R 243090 CDS NP_866068.1 32473074 1790382 complement(2259805..2260005) 1 NC_005027.1 hypothetical protein 2260005 1790382 RB4389 Rhodopirellula baltica SH 1 hypothetical protein NP_866068.1 2259805 R 243090 CDS NP_866069.1 32473075 1790534 complement(2260002..2260859) 1 NC_005027.1 PMID: 9371463 best DB hits: BLAST: pir:H69043; conserved hypothetical protein MTH1330 -; E=0.004 swissprot:Q50500; YE63_METTH HYPOTHETICAL PROTEIN MTH1463 (ORF11); E=0.005 pir:A69088; conserved hypothetical protein MTH1653 -; E=0.010 COG: MTH1330; COG3271 Predicted double-glycine peptidase; E=4e-04; hypothetical protein 2260859 1790534 RB4390 Rhodopirellula baltica SH 1 hypothetical protein NP_866069.1 2260002 R 243090 CDS NP_866070.1 32473076 1797105 2260905..2261108 1 NC_005027.1 hypothetical protein 2261108 1797105 RB4392 Rhodopirellula baltica SH 1 hypothetical protein NP_866070.1 2260905 D 243090 CDS NP_866071.1 32473077 1793840 2261154..2261375 1 NC_005027.1 hypothetical protein 2261375 1793840 RB4393 Rhodopirellula baltica SH 1 hypothetical protein NP_866071.1 2261154 D 243090 CDS NP_866072.1 32473078 1792288 2261372..2261938 1 NC_005027.1 PMID: 96196168 best DB hits: BLAST: pir:T34745; probable proteinase pfpI - Streptomyces coelicolor; E=6e-55 pir:F75423; proteinase I - Deinococcus radiodurans (strain R1); E=1e-50 pir:E83601; proteinase PfpI PA0355 [imported] - Pseudomonas; E=3e-40 COG: DR1199; COG0693 intracellular protease/amidase; E=1e-51 BH1980; COG0753 Catalase; E=4e-07 BB0621; COG0693 intracellular protease/amidase; E=4e-07 PFAM: PF00117; Glutamine amidotransferase class-I; E=0.13 PF01965; ThiJ/PfpI family; E=1.1e-61; proteinase I 2261938 1792288 RB4394 Rhodopirellula baltica SH 1 proteinase I NP_866072.1 2261372 D 243090 CDS NP_866073.1 32473079 1793678 2262023..2262535 1 NC_005027.1 PMID: 8007818 best DB hits: BLAST: gb:AAB31024.1; (S71704) Mip=24 kda macrophage infectivity; E=2e-09 gb:AAG57782.1; AE005496_5 (AE005496) Z3974 gene product; E=4e-06 pir:E83611; conserved hypothetical protein PA0269 [imported] -; E=6e-06 COG: PA0269; COG2128 Uncharacterized ACR; E=6e-07; macrophage infectivity potentiator protein Mip 2262535 1793678 RB4395 Rhodopirellula baltica SH 1 macrophage infectivity potentiator protein Mip NP_866073.1 2262023 D 243090 CDS NP_866074.1 32473080 1796170 2262532..2263887 1 NC_005027.1 PMID: 7559423 best DB hits: BLAST: swissprot:P48638; GSHR_ANASP GLUTATHIONE REDUCTASE (GR) (GRASE); E=7e-50 embl:CAA12270.1; (AJ224977) ORF 4 [Sphingomonas sp. RW5]; E=2e-49 gb:AAK04944.1; AE006318_7 (AE006318) glutathione reductase (EC; E=6e-49 COG: gor; COG1249 Dihydrolipoamide dehydrogenase/glutathione; E=4e-49 PFAM: PF00996; GDP dissociation inhibitor; E=0.34 PF00070; Pyridine nucleotide-disulphide; E=3.3e-62 PF02852; Pyridine nucleotide-disulphide; E=3.4e-06; glutathione reductase 2263887 1796170 RB4396 Rhodopirellula baltica SH 1 glutathione reductase NP_866074.1 2262532 D 243090 CDS NP_866075.1 32473081 1791110 2263976..2264143 1 NC_005027.1 hypothetical protein 2264143 1791110 RB4397 Rhodopirellula baltica SH 1 hypothetical protein NP_866075.1 2263976 D 243090 CDS NP_866076.1 32473082 1792095 complement(2264154..2264261) 1 NC_005027.1 hypothetical protein 2264261 1792095 RB4398 Rhodopirellula baltica SH 1 hypothetical protein NP_866076.1 2264154 R 243090 CDS NP_866077.1 32473083 1794492 complement(2264251..2265237) 1 NC_005027.1 PMID: 7602590 best DB hits: BLAST: embl:CAB59716.1; (AL132707) zinc-binding oxidoreductase; E=3e-31 pir:T10203; hypothetical protein F25G13.100 - Arabidopsis thaliana; E=2e-28 embl:CAC14345.1; (AL445945) zinc-binding oxidoreductase; E=1e-26 COG: VC0552; COG0604 NADPH:quinone reductase and related Zn-dependent; E=2e-26 PFAM: PF00107; Zinc-binding dehydrogenases; E=5.2e-48; quinone oxidoreductase 2265237 1794492 RB4399 Rhodopirellula baltica SH 1 quinone oxidoreductase NP_866077.1 2264251 R 243090 CDS NP_866078.1 32473084 1791805 complement(2265206..2265382) 1 NC_005027.1 hypothetical protein 2265382 1791805 RB4400 Rhodopirellula baltica SH 1 hypothetical protein NP_866078.1 2265206 R 243090 CDS NP_866079.1 32473085 1791755 2265340..2265501 1 NC_005027.1 hypothetical protein 2265501 1791755 RB4402 Rhodopirellula baltica SH 1 hypothetical protein NP_866079.1 2265340 D 243090 CDS NP_866080.1 32473086 1791540 2265539..2266447 1 NC_005027.1 best DB hits: BLAST: swissprot:P40398; YHXD_BACSU HYPOTHETICAL OXIDOREDUCTASE IN; E=2e-67 swissprot:P80873; GS39_BACSU GENERAL STRESS PROTEIN 39 (GSP39); E=3e-65 gb:AAG02162.1; AF212041_18 (AF212041) ribitol dehydrogenase; E=8e-65 COG: BS_yhxD; COG1028 Dehydrogenases with different specificities; E=2e-68 BH1511; COG1028 Dehydrogenases with different specificities (related; E=1e-64 DRA0364; COG1028 Dehydrogenases with different specificities; E=1e-62 PFAM: PF00106; short chain dehydrogenase; E=8.7e-53 PF00678; Short chain dehydrogenase/reduct; E=5.5e-09; oxidoreductase YhxD 2266447 1791540 RB4404 Rhodopirellula baltica SH 1 oxidoreductase YhxD NP_866080.1 2265539 D 243090 CDS NP_866081.1 32473087 1795008 complement(2266535..2266894) 1 NC_005027.1 best DB hits: BLAST: pir:T36457; probable DNA-binding protein - Streptomyces coelicolor; E=2e-25 embl:CAB89026.1; (AL353870) hypothetical protein SC6F7.18c.; E=0.002; DNA-binding protein 2266894 1795008 RB4405 Rhodopirellula baltica SH 1 DNA-binding protein NP_866081.1 2266535 R 243090 CDS NP_866082.1 32473088 1796474 2266905..2267123 1 NC_005027.1 hypothetical protein 2267123 1796474 RB4407 Rhodopirellula baltica SH 1 hypothetical protein NP_866082.1 2266905 D 243090 CDS NP_866083.1 32473089 1795831 complement(2267081..2268175) 1 NC_005027.1 PMID: 8973648 PMID: 91255245 best DB hits: BLAST: swissprot:P74917; C552_THIFE CYTOCHROME C-552 PRECURSOR (C552); E=8e-11 pir:B83334; probable cytochrome c PA2482 [imported] - Pseudomonas; E=5e-10 pir:F81040; cytochrome C4 NMB1805 [imported] - Neisseria; E=8e-10 COG: PA2482; COG2863 Cytochrome c553; E=4e-11 VC1439; COG2010 Cytochrome c, mono- and diheme variants; E=0.002; cytochrome c-552 2268175 1795831 RB4408 Rhodopirellula baltica SH 1 cytochrome c-552 NP_866083.1 2267081 R 243090 CDS NP_866084.1 32473090 1792645 complement(2268218..2268889) 1 NC_005027.1 PMID: 11481431; signal peptide 2268889 1792645 RB4410 Rhodopirellula baltica SH 1 signal peptide NP_866084.1 2268218 R 243090 CDS NP_866085.1 32473091 1793760 complement(2268889..2269314) 1 NC_005027.1 best DB hits: PFAM: PF01569; PAP2 superfamily; E=0.35; hypothetical protein 2269314 1793760 RB4414 Rhodopirellula baltica SH 1 hypothetical protein NP_866085.1 2268889 R 243090 CDS NP_866086.1 32473092 1794976 complement(2269302..2271803) 1 NC_005027.1 PMID: 1847686 PMID: 94364936 PMID: 83257235 PMID: 88054981 best DB hits: BLAST: gb:AAD20227.1; (AF111945) quinol oxidase subunit I [Rhodobacter; E=1e-153 swissprot:P24010; COX1_BACSU CYTOCHROME C OXIDASE POLYPEPTIDE I; E=1e-102 pir:S14397; cytochrome-c oxidase (EC 1.9.3.1) chain I - Bacillus; E=1e-102 COG: BS_ctaD; COG0843 Heme/copper-type cytochrome/quinol oxidases,; E=1e-103 BH2614; COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit; E=1e-97 BS_qoxB; COG0843 Heme/copper-type cytochrome/quinol oxidases,; E=2e-90 PFAM: PF00115; Cytochrome C and Quinol oxida; E=2e-160; cytochrome c oxidase polypeptide I 2271803 1794976 RB4416 Rhodopirellula baltica SH 1 cytochrome c oxidase polypeptide I NP_866086.1 2269302 R 243090 CDS NP_866087.1 32473093 1795959 complement(2271800..2272906) 1 NC_005027.1 PMID: 89231697 PMID: 91161592 best DB hits: BLAST: pir:A23711; cytochrome-c oxidase (EC 1.9.3.1) chain IIc precursor -; E=3e-42 swissprot:Q04441; COX2_BACFI CYTOCHROME C OXIDASE POLYPEPTIDE II; E=5e-38 ddbj:BAB06334.1; (AP001516) cytochrome caa3 oxidase (subunit II); E=2e-35 COG: BH2615_1; COG1622 Heme/copper-type cytochrome/quinol oxidases,; E=2e-21 XF1390; COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit; E=1e-14 slr1136; COG1622 Heme/copper-type cytochrome/quinol oxidases,; E=3e-14 PFAM: PF00116; Cytochrome C oxidase subunit II,; E=6.3e-25 PF00034; Cytochrome c; E=7e-11; cytochrome-c oxidase chain II/c precursor 2272906 1795959 RB4417 Rhodopirellula baltica SH 1 cytochrome-c oxidase chain II/c precursor NP_866087.1 2271800 R 243090 CDS NP_866088.1 32473094 1796373 2272912..2273448 1 NC_005027.1 best DB hits: BLAST: pir:G70340; Mg(2+) transport ATPase - Aquifex aeolicus ----- gb:; E=2e-10 gb:AAD43996.1; (U59485) attV [Agrobacterium tumefaciens]; E=1e-09 ddbj:BAB06944.1; (AP001518) magnesium (Mg2+) transporter; E=1e-09 COG: aq_447; COG1285 Uncharacterized membrane protein; E=2e-11 PFAM: PF02308; MgtC family; E=1.4e-20; magnesium ABC transporter ATPase 2273448 1796373 RB4419 Rhodopirellula baltica SH 1 magnesium ABC transporter ATPase NP_866088.1 2272912 D 243090 CDS NP_866089.1 32473095 1794081 complement(2273473..2274093) 1 NC_005027.1 best DB hits: BLAST: pir:B75253; DedA family protein - Deinococcus radiodurans (strain; E=2e-38 pir:S76640; hypothetical protein - Synechocystis sp. (strain PCC; E=1e-33 swissprot:Q48630; APL_LACLC ALKALINE PHOSPHATASE LIKE PROTEIN; E=1e-29 COG: DR2612; COG0586 Uncharacterized membrane-associated protein; E=2e-39 PFAM: PF00452; Apoptosis regulator proteins, Bcl-2; E=0.022 PF00597; DedA family; E=1.1e-09; DedA family protein 2274093 1794081 RB4420 Rhodopirellula baltica SH 1 DedA family protein NP_866089.1 2273473 R 243090 CDS NP_866090.1 32473096 1797061 complement(2274125..2274595) 1 NC_005027.1 PMID: 95214091 best DB hits: BLAST: pir:F82618; chemotaxis-related protein kinase XF1952 [imported] -; E=2e-09 gb:AAC25076.1; (AF044495) CheY homolog [Agrobacterium; E=5e-09 pir:S75938; chemotaxis protein cheA (EC 2.7.-.-) - Synechocystis sp.; E=6e-09 COG: sll0043_4; COG0784 CheY-like receiver domains; E=6e-10 CPn0586; COG2204 AAA superfamily ATPases with N-terminal receiver; E=8e-08 sll0039; COG0784 CheY-like receiver domains; E=8e-08 PFAM: PF00072; Response regulator receiver doma; E=8e-16; chemotaxis related cheY1 protein 2274595 1797061 RB4422 Rhodopirellula baltica SH 1 chemotaxis related cheY1 protein NP_866090.1 2274125 R 243090 CDS NP_866091.1 32473097 1790958 complement(2274588..2275085) 1 NC_005027.1 PMID: 92232718 PMID: 93155023 best DB hits: BLAST: pir:A83333; probable deaminase PA2499 [imported] - Pseudomonas; E=3e-13 embl:CAC18685.1; (AL451182) deaminase [Streptomyces; E=1e-12 embl:CAA07230.1; (AJ006764) deoxycytidylate deaminase; E=3e-12 COG: PA2499; COG0590 Cytosine/adenosine deaminases; E=3e-14 PFAM: PF00383; Cytidine and deoxycytidylate de; E=2.6e-19; cytidine and deoxycytidylate deaminase 2275085 1790958 RB4423 Rhodopirellula baltica SH 1 cytidine and deoxycytidylate deaminase NP_866091.1 2274588 R 243090 CDS NP_866092.1 32473098 1792716 2275100..2275483 1 NC_005027.1 hypothetical protein 2275483 1792716 RB4425 Rhodopirellula baltica SH 1 hypothetical protein NP_866092.1 2275100 D 243090 CDS NP_866093.1 32473099 1791277 complement(2275604..2275786) 1 NC_005027.1 best DB hits: BLAST: pir:A69202; conserved hypothetical protein MTH763 - Methanobacterium; E=0.79; hypothetical protein 2275786 1791277 RB4426 Rhodopirellula baltica SH 1 hypothetical protein NP_866093.1 2275604 R 243090 CDS NP_866094.1 32473100 1795182 2275637..2275903 1 NC_005027.1 hypothetical protein 2275903 1795182 RB4427 Rhodopirellula baltica SH 1 hypothetical protein NP_866094.1 2275637 D 243090 CDS NP_866095.1 32473101 1791311 complement(2275865..2275996) 1 NC_005027.1 hypothetical protein 2275996 1791311 RB4428 Rhodopirellula baltica SH 1 hypothetical protein NP_866095.1 2275865 R 243090 CDS NP_866096.1 32473102 1796303 2275996..2276265 1 NC_005027.1 PMID: 11743193 best DB hits: BLAST: embl:CAC16998.1; (AL450350) hypothetical protein [Streptomyces; E=0.45; hypothetical protein 2276265 1796303 RB4429 Rhodopirellula baltica SH 1 hypothetical protein NP_866096.1 2275996 D 243090 CDS NP_866097.1 32473103 1793975 2276333..2277139 1 NC_005027.1 best DB hits: BLAST: gb:AAG57269.1; AE005445_6 (AE005445) oxidoreductase; E=4e-41 swissprot:P33368; YOHF_ECOLI HYPOTHETICAL OXIDOREDUCTASE IN; E=8e-41 pir:G75333; 3-oxoacyl-acyl carrier protein reductase - Deinococcus; E=7e-33 COG: yohF; COG1028 Dehydrogenases with different specificities (related; E=8e-42 BS_ycdF; COG1028 Dehydrogenases with different specificities; E=2e-31 TM1724; COG1028 Dehydrogenases with different specificities (related; E=4e-25 PFAM: PF00106; short chain dehydrogenase; E=1.7e-42 PF00678; Short chain dehydrogenase/reduct; E=1.2e-07; acetoin dehydrogenase 2277139 1793975 RB4432 Rhodopirellula baltica SH 1 acetoin dehydrogenase NP_866097.1 2276333 D 243090 CDS NP_866098.1 32473104 1797018 2277208..2277696 1 NC_005027.1 PMID: 1340475 PMID: 8021175 best DB hits: BLAST: pir:T35689; hypothetical protein SC7C7.11 SC7C7.11 - Streptomyces; E=5e-30 swissprot:Q47953; FTPA_HAEDU FINE TANGLED PILI MAJOR SUBUNIT (24; E=1e-17 embl:CAB61290.1; (AL132991) DNA-binding protein; E=3e-16 COG: dps; COG0783 Starvation-inducible DNA-binding protein; E=1e-14 PFAM: PF02047; Dps protein family; E=4.1e-45; DNA protection during starvation protein 2277696 1797018 RB4433 Rhodopirellula baltica SH 1 DNA protection during starvation protein NP_866098.1 2277208 D 243090 CDS NP_866099.1 32473105 1795907 2277820..2278092 1 NC_005027.1 signal peptide 2278092 1795907 RB4436 Rhodopirellula baltica SH 1 signal peptide NP_866099.1 2277820 D 243090 CDS NP_866100.1 32473106 1792008 2278247..2278729 1 NC_005027.1 PMID: 8012595 best DB hits: BLAST: pir:D75431; probable general stress protein 26 - Deinococcus; E=4e-18 pir:D75427; hypothetical protein - Deinococcus radiodurans (strain; E=2e-07 swissprot:P80238; GS26_BACSU GENERAL STRESS PROTEIN 26 (GSP26); E=0.10; general stress protein 26 2278729 1792008 RB4438 Rhodopirellula baltica SH 1 general stress protein 26 NP_866100.1 2278247 D 243090 CDS NP_866101.1 32473107 1794791 2278882..2279925 1 NC_005027.1 best DB hits: BLAST: embl:CAC01649.1; (AL391072) conserved hypothetical protein; E=1e-06 pir:B83370; conserved hypothetical protein PA2211 [imported] -; E=5e-04 swissprot:P55567; Y4MH_RHISN HYPOTHETICAL 33.9 KD PROTEIN Y4MH; E=5e-04; hypothetical protein 2279925 1794791 RB4440 Rhodopirellula baltica SH 1 hypothetical protein NP_866101.1 2278882 D 243090 CDS NP_866102.1 32473108 1791854 complement(2279973..2280143) 1 NC_005027.1 hypothetical protein 2280143 1791854 RB4443 Rhodopirellula baltica SH 1 hypothetical protein NP_866102.1 2279973 R 243090 CDS NP_866103.1 32473109 1797026 2280283..2282394 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB56147.1; (AL117669) hypothetical protein [Streptomyces; E=3e-07 embl:CAB55704.1; (AL117387) secreted protein; E=0.014; hypothetical protein 2282394 1797026 RB4444 Rhodopirellula baltica SH 1 hypothetical protein NP_866103.1 2280283 D 243090 CDS NP_866104.1 32473110 1795372 complement(2282361..2282657) 1 NC_005027.1 hypothetical protein 2282657 1795372 RB4448 Rhodopirellula baltica SH 1 hypothetical protein NP_866104.1 2282361 R 243090 CDS NP_866105.1 32473111 1791803 complement(2282709..2282987) 1 NC_005027.1 hypothetical protein 2282987 1791803 RB4451 Rhodopirellula baltica SH 1 hypothetical protein NP_866105.1 2282709 R 243090 CDS NP_866106.1 32473112 1791777 2282954..2283214 1 NC_005027.1 hypothetical protein 2283214 1791777 RB4452 Rhodopirellula baltica SH 1 hypothetical protein NP_866106.1 2282954 D 243090 CDS NP_866107.1 32473113 1790396 2283201..2285420 1 NC_005027.1 PMID: 2498283 PMID: 2498284 PMID: 814121 best DB hits: BLAST: gb:AAC27808.1; (AF069392) polar flagellin [Vibrio; E=2e-17 gb:AAC01555.1; (AF007122) flagellin [Vibrio cholerae]; E=4e-17 pir:C82112; flagellin FlaE VC2144 [imported] - Vibrio cholerae; E=4e-17 COG: VC2144; COG1344 Flagellin and related hook-associated proteins; E=4e-18 PFAM: PF00669; Bacterial flagellin N-terminus; E=1e-26 PF00700; Bacterial flagellin C-terminus; E=1.2e-12; flagellin 2285420 FliC 1790396 FliC Rhodopirellula baltica SH 1 flagellin NP_866107.1 2283201 D 243090 CDS NP_866108.1 32473114 1791521 complement(2285426..2285650) 1 NC_005027.1 hypothetical protein 2285650 1791521 RB4455 Rhodopirellula baltica SH 1 hypothetical protein NP_866108.1 2285426 R 243090 CDS NP_866109.1 32473115 1795591 2285620..2285814 1 NC_005027.1 hypothetical protein 2285814 1795591 RB4456 Rhodopirellula baltica SH 1 hypothetical protein NP_866109.1 2285620 D 243090 CDS NP_866110.1 32473116 1796083 2285628..2285924 1 NC_005027.1 hypothetical protein 2285924 1796083 RB4457 Rhodopirellula baltica SH 1 hypothetical protein NP_866110.1 2285628 D 243090 CDS NP_866111.1 32473117 1797055 complement(2286061..2287089) 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S76294; hypothetical protein - Synechocystis sp. (strain PCC; E=6e-19 gb:AAD00285.1; (U78604) membrane protein [Streptococcus; E=2e-12 gb:AAK05280.1; AE006350_7 (AE006350) permease [Lactococcus lactis; E=4e-10 COG: slr0784; COG0628 Predicted permease; E=5e-20 PFAM: PF01594; Domain of unknown function DUF20; E=1.9e-45; hypothetical protein 2287089 1797055 RB4458 Rhodopirellula baltica SH 1 hypothetical protein NP_866111.1 2286061 R 243090 CDS NP_866112.1 32473118 1792774 complement(2287089..2288477) 1 NC_005027.1 PMID: 98344137 best DB hits: BLAST: swissprot:P11666; YGGB_ECOLI HYPOTHETICAL 30.9 KDA PROTEIN IN; E=5e-27 pir:D75011; hypothetical protein PAB1281 - Pyrococcus abyssi (strain; E=1e-22 pir:E71140; hypothetical protein PH0336 - Pyrococcus horikoshii; E=2e-22 COG: yggB; COG0668 Small-conductance mechanosensitive channel; E=5e-28 PA5022; COG3264 Small-conductance mechanosensitive channel; E=5e-13 PFAM: PF00924; Uncharacterized protein family; E=4.4e-52; hypothetical protein 2288477 1792774 RB4459 Rhodopirellula baltica SH 1 hypothetical protein NP_866112.1 2287089 R 243090 CDS NP_866113.1 32473119 1796607 complement(2288428..2289696) 1 NC_005027.1 PMID: 9634230 best DB hits: BLAST: swissprot:Q10616; YC90_MYCTU HYPOTHETICAL 56.0 KDA PROTEIN RV1290C; E=4e-35 pir:T35776; hypothetical protein SC8A6.09c SC8A6.09 - Streptomyces; E=1e-23 gb:AAK03181.1; (AE006150) unknown [Pasteurella multocida]; E=1e-11; hypothetical protein 2289696 1796607 RB4460 Rhodopirellula baltica SH 1 hypothetical protein NP_866113.1 2288428 R 243090 CDS NP_866114.1 32473120 1797065 complement(2289693..2291114) 1 NC_005027.1 PMID: 9679194 best DB hits: BLAST: pir:H82702; small conductance mechanosensitive ion channel XF1258; E=2e-17 pir:E71140; hypothetical protein PH0336 - Pyrococcus horikoshii; E=1e-15 pir:B83096; conserved hypothetical protein PA4394 [imported] -; E=2e-15 COG: XF1258; COG0668 Small-conductance mechanosensitive channel; E=2e-18 HI0195.1; COG3264 Small-conductance mechanosensitive channel; E=1e-09 PFAM: PF00924; Uncharacterized protein family UPF00; E=6.2e-44; hypothetical protein 2291114 1797065 RB4461 Rhodopirellula baltica SH 1 hypothetical protein NP_866114.1 2289693 R 243090 CDS NP_866115.1 32473121 1794891 complement(2291005..2291400) 1 NC_005027.1 hypothetical protein 2291400 1794891 RB4462 Rhodopirellula baltica SH 1 hypothetical protein NP_866115.1 2291005 R 243090 CDS NP_866116.1 32473122 1795759 complement(2291404..2292075) 1 NC_005027.1 signal peptide 2292075 1795759 RB4464 Rhodopirellula baltica SH 1 signal peptide NP_866116.1 2291404 R 243090 CDS NP_866117.1 32473123 1791781 complement(2292091..2292264) 1 NC_005027.1 hypothetical protein 2292264 1791781 RB4465 Rhodopirellula baltica SH 1 hypothetical protein NP_866117.1 2292091 R 243090 CDS NP_866118.1 32473124 1796690 2292230..2292367 1 NC_005027.1 hypothetical protein 2292367 1796690 RB4466 Rhodopirellula baltica SH 1 hypothetical protein NP_866118.1 2292230 D 243090 CDS NP_866119.1 32473125 1790632 2292401..2293501 1 NC_005027.1 PMID: 9278503 best DB hits: BLAST: pir:F82056; conserved hypothetical protein VC2610 [imported] -; E=3e-26 pir:F83600; conserved hypothetical protein PA0368 [imported] -; E=5e-24 swissprot:P45524; YHET_ECOLI HYPOTHETICAL 38.5 KD PROTEIN IN; E=2e-23 COG: VC2610; COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold; E=3e-27 YMR210w; COG0429 Predicted hydrolase of the alpha/beta-hydrolase; E=1e-23 PFAM: PF00561; alpha/beta hydrolase fold; E=3.9e-06; hypothetical protein 2293501 1790632 RB4467 Rhodopirellula baltica SH 1 hypothetical protein NP_866119.1 2292401 D 243090 CDS NP_866120.1 32473126 1795314 complement(2293616..2294104) 1 NC_005027.1 hypothetical protein 2294104 1795314 RB4468 Rhodopirellula baltica SH 1 hypothetical protein NP_866120.1 2293616 R 243090 CDS NP_866121.1 32473127 1790254 complement(2294167..2294676) 1 NC_005027.1 signal peptide 2294676 1790254 RB4470 Rhodopirellula baltica SH 1 signal peptide NP_866121.1 2294167 R 243090 CDS NP_866122.1 32473128 1793751 complement(2294808..2294981) 1 NC_005027.1 hypothetical protein 2294981 1793751 RB4473 Rhodopirellula baltica SH 1 hypothetical protein NP_866122.1 2294808 R 243090 CDS NP_866123.1 32473129 1795610 2295048..2295554 1 NC_005027.1 PMID: 8265357 best DB hits: BLAST: pir:F83054; conserved hypothetical protein PA4738 [imported] -; E=3e-06 swissprot:P32691; YJBJ_ECOLI PROTEIN YJBJ ----- pir: D65212; E=2e-05 embl:CAB98302.2; (AL390114) probable 8.3 Kd protein in dinf-qor; E=0.35 COG: PA4738; COG3237 Uncharacterized BCR; E=3e-07; hypothetical protein 2295554 1795610 RB4474 Rhodopirellula baltica SH 1 hypothetical protein NP_866123.1 2295048 D 243090 CDS NP_866124.1 32473130 1790057 2295557..2295943 1 NC_005027.1 hypothetical protein 2295943 1790057 RB4476 Rhodopirellula baltica SH 1 hypothetical protein NP_866124.1 2295557 D 243090 CDS NP_866125.1 32473131 1796136 2295940..2296149 1 NC_005027.1 hypothetical protein 2296149 1796136 RB4477 Rhodopirellula baltica SH 1 hypothetical protein NP_866125.1 2295940 D 243090 CDS NP_866126.1 32473132 1790094 2296122..2296640 1 NC_005027.1 signal peptide 2296640 1790094 RB4478 Rhodopirellula baltica SH 1 signal peptide NP_866126.1 2296122 D 243090 CDS NP_866127.1 32473133 1789958 2296646..2296915 1 NC_005027.1 hypothetical protein 2296915 1789958 RB4480 Rhodopirellula baltica SH 1 hypothetical protein NP_866127.1 2296646 D 243090 CDS NP_866128.1 32473134 1794821 complement(2296905..2297240) 1 NC_005027.1 hypothetical protein 2297240 1794821 RB4482 Rhodopirellula baltica SH 1 hypothetical protein NP_866128.1 2296905 R 243090 CDS NP_866129.1 32473135 1791071 2297267..2298565 1 NC_005027.1 PMID: 7792599 PMID: 7674922 best DB hits: BLAST: swissprot:P54984; Y100_SYNY3 HYPOTHETICAL 42.7 KD PROTEIN SLL0100; E=2e-59 gb:AAF26972.1; AC018363_17 (AC018363) IAA-amino acid hydrolase; E=1e-51 swissprot:P54968; ILR1_ARATH IAA-AMINO ACID HYDROLASE 1 -----; E=2e-51 COG: sll0100; COG1473 Metal-dependent amidohydrolases/aminoacylases; E=2e-60 PFAM: PF01546; Peptidase M20/M25/M40; E=4.9e-32; IAA-amino acid hydrolase 1 2298565 1791071 RB4484 Rhodopirellula baltica SH 1 IAA-amino acid hydrolase 1 NP_866129.1 2297267 D 243090 CDS NP_866130.1 32473136 1792321 2298652..2299770 1 NC_005027.1 ATP-dependent carboxylate-amine ligase; carboxylate-amine ligase 2299770 1792321 RB4485 Rhodopirellula baltica SH 1 carboxylate-amine ligase NP_866130.1 2298652 D 243090 CDS NP_866131.1 32473137 1790555 2299859..2301403 1 NC_005027.1 PMID: 7553451 best DB hits: BLAST: swissprot:Q06065; ATOC_ECOLI ACETOACETATE METABOLISM REGULATORY; E=1e-86 swissprot:P45671; NTRC_AZOBR NITROGEN ASSIMILATION REGULATORY; E=4e-84 pir:S42745; nitrogen assimilation regulatory protein ntrC -; E=5e-84 COG: atoC; COG2204 AAA superfamily ATPases with N-terminal receiver; E=1e-87 PFAM: PF00072; Response regulator receiver dom; E=2e-29 PF00004; ATPase associated with v; E=0.34 PF00158; Sigma-54 interaction domain; E=5.2e-129; nitrogen assimilation regulatory protein 2301403 ntrC 1790555 ntrC Rhodopirellula baltica SH 1 nitrogen assimilation regulatory protein NP_866131.1 2299859 D 243090 CDS NP_866132.1 32473138 1792726 2301387..2301905 1 NC_005027.1 hypothetical protein 2301905 1792726 RB4489 Rhodopirellula baltica SH 1 hypothetical protein NP_866132.1 2301387 D 243090 CDS NP_866133.1 32473139 1791766 complement(2301833..2302138) 1 NC_005027.1 hypothetical protein 2302138 1791766 RB4492 Rhodopirellula baltica SH 1 hypothetical protein NP_866133.1 2301833 R 243090 CDS NP_866134.1 32473140 1792902 complement(2302123..2302374) 1 NC_005027.1 hypothetical protein 2302374 1792902 RB4493 Rhodopirellula baltica SH 1 hypothetical protein NP_866134.1 2302123 R 243090 CDS NP_866135.1 32473141 1794577 2302950..2303099 1 NC_005027.1 hypothetical protein 2303099 1794577 RB4497 Rhodopirellula baltica SH 1 hypothetical protein NP_866135.1 2302950 D 243090 CDS NP_866136.1 32473142 1793784 complement(2303250..2303522) 1 NC_005027.1 hypothetical protein 2303522 1793784 RB4498 Rhodopirellula baltica SH 1 hypothetical protein NP_866136.1 2303250 R 243090 CDS NP_866137.1 32473143 1793429 complement(2303519..2303764) 1 NC_005027.1 hypothetical protein 2303764 1793429 RB4499 Rhodopirellula baltica SH 1 hypothetical protein NP_866137.1 2303519 R 243090 CDS NP_866138.1 32473144 1791925 2303645..2303908 1 NC_005027.1 best DB hits: BLAST: swissprot:AHNK_HUMAN_2; [Segment 2 of 2] NEUROBLAST DIFFERENTIATION; E=0.006 pir:A45259; desmoyokin - human (fragments); E=0.018; hypothetical protein 2303908 1791925 RB4500 Rhodopirellula baltica SH 1 hypothetical protein NP_866138.1 2303645 D 243090 CDS NP_866139.1 32473145 1790588 2303992..2304171 1 NC_005027.1 best DB hits: BLAST: pir:T26079; hypothetical protein W02A2.5 - Caenorhabditis elegans; E=0.21 PFAM: PF01679; Uncharacterized protein family UPF00; E=2.1e-11; hypothetical protein 2304171 1790588 RB4502 Rhodopirellula baltica SH 1 hypothetical protein NP_866139.1 2303992 D 243090 CDS NP_866140.1 32473146 1791962 2304293..2304838 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB06016.1; (AP001515) BH2297~unknown conserved protein; E=3e-13 ddbj:BAB05689.1; (AP001513) BH1970~unknown conserved protein; E=2e-10 pir:A69782; probable membrane protein ydfS - Bacillus subtilis; E=6e-08 COG: BH2297; COG2323 Predicted membrane protein; E=3e-14; hypothetical protein 2304838 1791962 RB4504 Rhodopirellula baltica SH 1 hypothetical protein NP_866140.1 2304293 D 243090 CDS NP_866141.1 32473147 1796304 2304919..2306070 1 NC_005027.1 PMID: 11248100 best DB hits: BLAST: gb:AAK03159.1; (AE006148) unknown [Pasteurella multocida]; E=3e-53 embl:CAC10327.1; (AL442629) integral membrane protein; E=0.020 PFAM: PF01260; AP endonuclease 1; E=0.4; hypothetical protein 2306070 1796304 RB4505 Rhodopirellula baltica SH 1 hypothetical protein NP_866141.1 2304919 D 243090 CDS NP_866142.1 32473148 1797039 2306074..2306865 1 NC_005027.1 PMID: 20317087 best DB hits: BLAST: pir:D83165; conserved hypothetical protein PA3857 [imported] -; E=6e-19 pir:A70131; phosphatidyltransferase homolog - Lyme disease; E=2e-12 gb:AAF27310.1; AF155772_4 (AF155772) phosphatidylcholine synthase; E=4e-11 COG: BB0249; COG1183 Phosphatidylserine synthase; E=2e-13; phosphatidylcholine synthase 2306865 1797039 RB4506 Rhodopirellula baltica SH 1 phosphatidylcholine synthase NP_866142.1 2306074 D 243090 CDS NP_866143.1 32473149 1794236 2306813..2307469 1 NC_005027.1 PMID: 99453779 best DB hits: BLAST: pir:S76044; hypothetical protein slr0322 - Synechocystis sp. (strain; E=6e-10 pir:F70801; hypothetical protein Rv3765c - Mycobacterium; E=3e-09 embl:CAB54568.1; (AJ006392) response regulator [Streptococcus; E=4e-09 COG: slr0322_2; COG0784 CheY-like receiver domains; E=6e-11 Rv3765c; COG0745 Response regulators consisting of a CheY-like; E=3e-10 DRA0355_2; COG0784 CheY-like receiver domains; E=2e-09 PFAM: PF00072; Response regulator receiver doma; E=1.1e-14; chemotaxis response regulator cheYI 2307469 cheY 1794236 cheY Rhodopirellula baltica SH 1 chemotaxis response regulator cheYI NP_866143.1 2306813 D 243090 CDS NP_866144.1 32473150 1793126 complement(2307508..2307657) 1 NC_005027.1 hypothetical protein 2307657 1793126 RB4510 Rhodopirellula baltica SH 1 hypothetical protein NP_866144.1 2307508 R 243090 CDS NP_866145.1 32473151 1795739 2307911..2312824 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: swissprot:Q02998; YH19_RHOCA HYPOTHETICAL 104.1 KD PROTEIN IN HYPE; E=1e-120 gb:AAA98755.1; (L29642) methyltransferase [Pseudomonas; E=5e-58 pir:E82198; sensor histidine kinaseresponse regulator VC1445; E=3e-49 COG: VC1349_2; COG0642 Sensory transduction histidine kinases; E=4e-38 BH1655; COG1352 Methylase of chemotaxis methyl-accepting proteins; E=6e-31 arcB_1; COG0642 Sensory transduction histidine kinases; E=4e-30 PFAM: PF01339; CheB methylesterase; E=3.9e-06 PF01303; Egg lysin (Sperm-lysin); E=0.017 PF01339; CheB methylesterase; E=0.076; sensory transduction histidine kinase 2312824 1795739 RB4511 Rhodopirellula baltica SH 1 sensory transduction histidine kinase NP_866145.1 2307911 D 243090 CDS NP_866146.1 32473152 1796656 2312848..2314071 1 NC_005027.1 best DB hits: BLAST: pir:G75425; conserved hypothetical protein - Deinococcus radiodurans; E=5e-44 embl:CAA59823.1; (X85811) ORF N2219 [Saccharomyces cerevisiae]; E=4e-11 embl:CAA95970.1; (Z71370) ORF YNL094w [Saccharomyces cerevisiae]; E=4e-11; hypothetical protein 2314071 1796656 RB4512 Rhodopirellula baltica SH 1 hypothetical protein NP_866146.1 2312848 D 243090 CDS NP_866147.1 32473153 1795263 complement(2314118..2315098) 1 NC_005027.1 PMID: 95012680 best DB hits: BLAST: pir:G75252; probable brkB protein - Deinococcus radiodurans (strain; E=3e-19 pir:I40328; serum-resistance protein brkB [imported] - Bordetella; E=2e-12 pir:A82807; BrkB protein XF0432 [imported] - Xylella fastidiosa; E=2e-09 COG: DR2609; COG1295 tRNA-processing ribonuclease BN; E=2e-20; serum resistance protein brkB 2315098 1795263 RB4513 Rhodopirellula baltica SH 1 serum resistance protein brkB NP_866147.1 2314118 R 243090 CDS NP_866148.1 32473154 1793168 complement(2315151..2315867) 1 NC_005027.1 PMID: 94329558 PMID: 89024591 best DB hits: BLAST: ddbj:BAB03982.1; (AP001507) RNA polymerase ECF-type sigma factor; E=2e-07 embl:CAA09264.1; (AJ010601) ECF sigma factor [Streptomyces; E=2e-04 swissprot:Q45585; SIGW_BACSU RNA POLYMERASE SIGMA FACTOR SIGW; E=3e-04 COG: BH0263; COG1595 DNA-directed RNA polymerase specialized sigma; E=2e-08 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=3.9e-10; RNA polymerase ECF-type sigma factor 2315867 1793168 RB4514 Rhodopirellula baltica SH 1 RNA polymerase ECF-type sigma factor NP_866148.1 2315151 R 243090 CDS NP_866149.1 32473155 1795006 2315930..2316283 1 NC_005027.1 PMID: 8108417 PMID: 97052967 best DB hits: BLAST: pir:C70304; 4a-hydroxytetrahydrobiopterin dehydratase (EC 4.2.1.96); E=2e-10 ddbj:BAA97373.1; (AB023044) gene_id:MWD22.5~similar to unknown; E=5e-10 swissprot:P43335; PHS_PSEAE PTERIN-4-ALPHA-CARBINOLAMINE; E=4e-09 COG: aq_049; COG2154 Pterin-4a-carbinolamine dehydratase; E=2e-11 PFAM: PF01329; Pterin 4 alpha carbinolamine dehydr; E=1.2e-18; pterin-4-alpha-carbinolamine dehydratase 2316283 1795006 RB4517 Rhodopirellula baltica SH 1 pterin-4-alpha-carbinolamine dehydratase NP_866149.1 2315930 D 243090 CDS NP_866150.1 32473156 1796683 2316280..2316618 1 NC_005027.1 hypothetical protein 2316618 1796683 RB4519 Rhodopirellula baltica SH 1 hypothetical protein NP_866150.1 2316280 D 243090 CDS NP_866151.1 32473157 1794471 2316763..2318100 1 NC_005027.1 hypothetical protein 2318100 1794471 RB4522 Rhodopirellula baltica SH 1 hypothetical protein NP_866151.1 2316763 D 243090 CDS NP_866152.1 32473158 1790274 2318176..2318385 1 NC_005027.1 hypothetical protein 2318385 1790274 RB4526 Rhodopirellula baltica SH 1 hypothetical protein NP_866152.1 2318176 D 243090 CDS NP_866153.1 32473159 1793578 2318321..2319655 1 NC_005027.1 PMID: 7972002 PMID: 7768872 best DB hits: BLAST: ddbj:BAB06601.1; (AP001517) 3-oxoacyl-(acyl-carrier protein); E=9e-37 pir:S77464; 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); E=1e-34 pir:G69842; 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); E=1e-34 COG: BH2882; COG0304 3-oxoacyl-(acyl-carrier-protein) synthase I; E=8e-38 PFAM: PF00109; Beta-ketoacyl synthase, N-ter; E=3.2e-10; 3-oxoacyl-ACP synthase 2319655 1793578 RB4527 Rhodopirellula baltica SH 1 3-oxoacyl-ACP synthase NP_866153.1 2318321 D 243090 CDS NP_866154.1 32473160 1793077 complement(2319639..2319857) 1 NC_005027.1 hypothetical protein 2319857 1793077 RB4528 Rhodopirellula baltica SH 1 hypothetical protein NP_866154.1 2319639 R 243090 CDS NP_866155.1 32473161 1795378 complement(2319854..2320399) 1 NC_005027.1 signal peptide 2320399 1795378 RB4529 Rhodopirellula baltica SH 1 signal peptide NP_866155.1 2319854 R 243090 CDS NP_866156.1 32473162 1796649 complement(2320475..2323867) 1 NC_005027.1 PMID: 8829543 PMID: 2678100 best DB hits: BLAST: gb:AAG54908.1; AE005237_4 (AE005237) inner membrane; E=1e-109 swissprot:P38054; YBDE_ECOLI HYPOTHETICAL 114.7 KDA PROTEIN IN; E=1e-109 gb:AAD11749.1; (AF067954) inner membrane protoncation; E=1e-109 COG: ybdE; COG0841 Cation/multidrug efflux pump; E=1e-110 PFAM: PF00873; AcrB/AcrD/AcrF family; E=5.1e-154; cation efflux system protein czcA-1 2323867 czcA 1796649 czcA Rhodopirellula baltica SH 1 cation efflux system protein czcA-1 NP_866156.1 2320475 R 243090 CDS NP_866157.1 32473163 1796337 complement(2323927..2325441) 1 NC_005027.1 PMID: 12065505 best DB hits: BLAST: embl:CAC21493.1; (AJ278866) MchE protein [Escherichia coli]; E=0.37 swissprot:P22519; CVAA_ECOLI COLICIN V SECRETION PROTEIN CVAA; E=0.38 pir:E82263; conserved hypothetical protein VC0913 [imported] -; E=0.76 PFAM: PF02221; E1 family; E=0.88 PF00364; Biotin-requiring enzyme; E=0.0054; MchE protein 2325441 1796337 RB4532 Rhodopirellula baltica SH 1 MchE protein NP_866157.1 2323927 R 243090 CDS NP_866158.1 32473164 1793746 2325446..2325652 1 NC_005027.1 hypothetical protein 2325652 1793746 RB4536 Rhodopirellula baltica SH 1 hypothetical protein NP_866158.1 2325446 D 243090 CDS NP_866159.1 32473165 1796849 complement(2325701..2326219) 1 NC_005027.1 signal peptide 2326219 1796849 RB4538 Rhodopirellula baltica SH 1 signal peptide NP_866159.1 2325701 R 243090 CDS NP_866160.1 32473166 1795484 complement(2326366..2327802) 1 NC_005027.1 PMID: 8829543 best DB hits: BLAST: gb:AAG09627.1; (AY007258) CztC [Pseudomonas fluorescens]; E=3e-15 pir:JC4698; divalent cation resistant determinant protein C -; E=4e-15 swissprot:P13509; CZCC_ALCEU COBALT-ZINC-CADMIUM RESISTANCE; E=3e-14 COG: PA2522; COG1538 Outer membrane protein; E=8e-13 PFAM: PF02321; Outer membrane efflux protein; E=2.9e-11; divalent cation resistant determinant protein C 2327802 czcC 1795484 czcC Rhodopirellula baltica SH 1 divalent cation resistant determinant protein C NP_866160.1 2326366 R 243090 CDS NP_866161.1 32473167 1794380 complement(2328049..2328231) 1 NC_005027.1 best DB hits: PFAM: PF00048; Small cytokines (intecrine/chemokine; E=0.2; hypothetical protein 2328231 1794380 RB4542 Rhodopirellula baltica SH 1 hypothetical protein NP_866161.1 2328049 R 243090 CDS NP_866162.1 32473168 1796135 complement(2328228..2328704) 1 NC_005027.1 signal peptide 2328704 1796135 RB4544 Rhodopirellula baltica SH 1 signal peptide NP_866162.1 2328228 R 243090 CDS NP_866163.1 32473169 1796221 complement(2328848..2330116) 1 NC_005027.1 PMID: 8390993 best DB hits: BLAST: pir:T03939; potassium channel protein - maize ----- embl:; E=0.27 pir:T45609; hypothetical protein F13G24.40 - Arabidopsis thaliana; E=0.47 ddbj:BAB09948.1; (AB005249) gene_id:MXM12.8~unknown protein; E=0.47 PFAM: PF00023; Ank repeat; E=2.5e-08; ankyrin protein 2330116 1796221 RB4547 Rhodopirellula baltica SH 1 ankyrin protein NP_866163.1 2328848 R 243090 CDS NP_866164.1 32473170 1790105 2330227..2330508 1 NC_005027.1 hypothetical protein 2330508 1790105 RB4550 Rhodopirellula baltica SH 1 hypothetical protein NP_866164.1 2330227 D 243090 CDS NP_866165.1 32473171 1795988 complement(2330298..2330537) 1 NC_005027.1 hypothetical protein 2330537 1795988 RB4551 Rhodopirellula baltica SH 1 hypothetical protein NP_866165.1 2330298 R 243090 CDS NP_866166.1 32473172 1793351 2330568..2330717 1 NC_005027.1 hypothetical protein 2330717 1793351 RB4552 Rhodopirellula baltica SH 1 hypothetical protein NP_866166.1 2330568 D 243090 CDS NP_866167.1 32473173 1792626 2330683..2330889 1 NC_005027.1 hypothetical protein 2330889 1792626 RB4553 Rhodopirellula baltica SH 1 hypothetical protein NP_866167.1 2330683 D 243090 CDS NP_866168.1 32473174 1791243 2330930..2331106 1 NC_005027.1 hypothetical protein 2331106 1791243 RB4554 Rhodopirellula baltica SH 1 hypothetical protein NP_866168.1 2330930 D 243090 CDS NP_866169.1 32473175 1792965 complement(2331156..2331341) 1 NC_005027.1 hypothetical protein 2331341 1792965 RB4555 Rhodopirellula baltica SH 1 hypothetical protein NP_866169.1 2331156 R 243090 CDS NP_866170.1 32473176 1795762 2331428..2332459 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 2332459 1795762 RB4556 Rhodopirellula baltica SH 1 signal peptide NP_866170.1 2331428 D 243090 CDS NP_866171.1 32473177 1792083 2332551..2333021 1 NC_005027.1 signal peptide 2333021 1792083 RB4557 Rhodopirellula baltica SH 1 signal peptide NP_866171.1 2332551 D 243090 CDS NP_866172.1 32473178 1796642 complement(2332976..2333224) 1 NC_005027.1 hypothetical protein 2333224 1796642 RB4558 Rhodopirellula baltica SH 1 hypothetical protein NP_866172.1 2332976 R 243090 CDS NP_866173.1 32473179 1794188 2333282..2335552 1 NC_005027.1 PMID: 8969205 PMID: 10220172 best DB hits: BLAST: pir:B82755; beta-hexosaminidase precursor XF0847 [imported] -; E=2e-35 swissprot:P96155; HEX1_VIBFU BETA-HEXOSAMINIDASE; E=4e-26 pir:A82301; beta-N-acetylhexosaminidase VC0613 [imported] - Vibrio; E=2e-25 PFAM: PF02838; Glycosyl hydrolase 20,; E=0.00019 PF00728; Glycosyl hydrolase 20,; E=5.3e-07; beta-hexosaminidase 2335552 1794188 RB4561 Rhodopirellula baltica SH 1 beta-hexosaminidase NP_866173.1 2333282 D 243090 CDS NP_866174.1 32473180 1797008 2335625..2337433 1 NC_005027.1 PMID: 8652595 PMID: 10835424 best DB hits: BLAST: swissprot:P96169; SGLT_VIBPA SODIUMGLUCOSE COTRANSPORTER; E=5e-24 ddbj:BAA11215.1; (D78137) Na+glucose symporter [Vibrio; E=6e-22 ddbj:BAA22950.1; (AB008225) Na+-glucose cotransporter type 1; E=4e-16 COG: sll1087; COG0591 Na+/proline, Na+/panthothenate symporters and; E=3e-13 yidK; COG0591 Na+/proline, Na+/panthothenate symporters and related; E=1e-06 MTH1856; COG0591 Na+/proline, Na+/panthothenate symporters and; E=1e-06 PFAM: PF00474; Sodium:solute symporter family; E=0.0075; sodium/glucose cotransporter 2337433 sglT 1797008 sglT Rhodopirellula baltica SH 1 sodium/glucose cotransporter NP_866174.1 2335625 D 243090 CDS NP_866175.1 32473181 1792256 complement(2337476..2338300) 1 NC_005027.1 PMID: 99429847 best DB hits: BLAST: embl:CAA06738.1; (AJ005843) cryptic haloacid dehalogenase 1; E=2e-31 embl:CAB61854.1; (AL133252) dehalogenase [Streptomyces; E=3e-24 pdb:1ZRN; Intermediate Structure Of L-2-Haloacid Dehalogenase; E=7e-20 COG: BH3587; COG0546 Predicted phosphatases; E=2e-09 PA0810; COG1011 Predicted hydrolases of the HAD superfamily; E=7e-07 DR2613; COG0637 Predicted phosphatase/phosphohexomutase; E=6e-06 PFAM: PF00702; haloacid dehalogenase-like hydrolas; E=8.2e-21; cryptic haloacid dehalogenase 1 2338300 chd1 1792256 chd1 Rhodopirellula baltica SH 1 cryptic haloacid dehalogenase 1 NP_866175.1 2337476 R 243090 CDS NP_866176.1 32473182 1796610 complement(2338439..2339095) 1 NC_005027.1 best DB hits: BLAST: gb:AAD54003.1; AF088856_2 (AF088856) hypothetical protein; E=4e-20 embl:CAB69777.1; (AL137187) tetR-family transcriptional; E=6e-16 embl:CAB93063.1; (AL357432) transcriptional regulator; E=2e-14 COG: VCA0586; COG1309 Transcriptional regulator; E=1e-11 PFAM: PF00440; Bacterial regulatory proteins, tetR; E=5.4e-11; hypothetical protein 2339095 1796610 RB4571 Rhodopirellula baltica SH 1 hypothetical protein NP_866176.1 2338439 R 243090 CDS NP_866177.1 32473183 1791337 complement(2339103..2339375) 1 NC_005027.1 hypothetical protein 2339375 1791337 RB4572 Rhodopirellula baltica SH 1 hypothetical protein NP_866177.1 2339103 R 243090 CDS NP_866178.1 32473184 1795284 2339600..2340643 1 NC_005027.1 signal peptide 2340643 1795284 RB4575 Rhodopirellula baltica SH 1 signal peptide NP_866178.1 2339600 D 243090 CDS NP_866179.1 32473185 1792813 complement(2340650..2342152) 1 NC_005027.1 best DB hits: BLAST: pir:T01022; hypothetical protein YUP8H12R.5 - Arabidopsis thaliana; E=0.028 pir:T01023; hypothetical protein YUP8H12R.6 - Arabidopsis thaliana; E=0.032 pir:T01021; hypothetical protein YUP8H12R.4 - Arabidopsis thaliana; E=0.036; signal peptide 2342152 1792813 RB4576 Rhodopirellula baltica SH 1 signal peptide NP_866179.1 2340650 R 243090 CDS NP_866180.1 32473186 1790471 complement(2342223..2344127) 1 NC_005027.1 PMID: 10498721 PMID: 8755891 best DB hits: BLAST: gb:AAF34252.1; AF168003_7 (AF168003) asparagine; E=1e-100 gb:AAF24002.1; (AF035937) WbpS [Pseudomonas aeruginosa]; E=9e-94 ddbj:BAA33606.1; (AB012956) probable asparagine synthetase; E=1e-89 COG: BS_asnB; COG0367 Asparagine synthase (glutamine-hydrolyzing); E=2e-86 PFAM: PF00310; Glutamine amidotransferases clas; E=5.6e-21 PF00733; Asparagine synthase; E=1.5e-51; asparagine synthetase [glutamine-hydrolyzing] 1 2344127 asnB 1790471 asnB Rhodopirellula baltica SH 1 asparagine synthetase [glutamine-hydrolyzing] 1 NP_866180.1 2342223 R 243090 CDS NP_866181.1 32473187 1791776 complement(2344200..2345492) 1 NC_005027.1 PMID: 7968456 best DB hits: BLAST: gb:AAG20419.1; (AE005114) hemolysin protein; Hlp [Halobacterium; E=3e-25 pir:F72326; hemolysin-related protein - Thermotoga maritima (strain; E=9e-25 pir:H71299; probable hemolysin (tlyC) - syphilis spirochete -----; E=6e-23 COG: VNG2308G; COG1253 Uncharacterized CBS domain-containing proteins; E=3e-26 PFAM: PF00571; CBS domain; E=7e-06; hemolysin protein 2345492 1791776 RB4578 Rhodopirellula baltica SH 1 hemolysin protein NP_866181.1 2344200 R 243090 CDS NP_866182.1 32473188 1794659 complement(2345489..2346073) 1 NC_005027.1 PMID: 8905232 best DB hits: BLAST: swissprot:P77385; YBEY_ECOLI HYPOTHETICAL 17.5 KDA PROTEIN IN; E=4e-06 embl:CAB62265.1; (AJ249116) YbeY protein [Salmonella typhimurium]; E=4e-06 gb:AAG54992.1; AE005245_1 (AE005245) orf, hypothetical protein; E=5e-06 COG: ybeY; COG0319 Predicted metal-dependent hydrolase; E=4e-07 PFAM: PF02130; Uncharacterized protein family UPF00; E=6.9e-14; hypothetical protein 2346073 1794659 RB4579 Rhodopirellula baltica SH 1 hypothetical protein NP_866182.1 2345489 R 243090 CDS NP_866183.1 32473189 1793550 complement(2346070..2348454) 1 NC_005027.1 PMID: 8969508 best DB hits: BLAST: swissprot:P46344; YQFF_BACSU HYPOTHETICAL 79.2 KD PROTEIN IN; E=1e-58 ddbj:BAB05081.1; (AP001511) BH1362~unknown conserved protein; E=4e-54 pir:E72244; conserved hypothetical protein - Thermotoga maritima; E=1e-48 COG: BS_yqfF; COG1480 Predicted membrane-associated HD superfamily; E=1e-59 PFAM: PF01966; HD domain; E=5.3e-21; hypothetical protein 2348454 1793550 RB4580 Rhodopirellula baltica SH 1 hypothetical protein NP_866183.1 2346070 R 243090 CDS NP_866184.1 32473190 1792998 complement(2348451..2349599) 1 NC_005027.1 PMID: 8444794 best DB hits: BLAST: swissprot:P46343; PHOL_BACSU PHOH-LIKE PROTEIN ----- pir:; E=1e-70 ddbj:BAB05080.1; (AP001511) phosphate starvation-induced protein; E=4e-69 embl:CAA12155.1; (AJ224829) ORF4 [Bacillus megaterium]; E=8e-69 COG: BS_phoH; COG1702 Phosphate starvation-inducible protein PhoH,; E=1e-71 ybeZ; COG1702 Phosphate starvation-inducible protein PhoH, predicted; E=4e-68 Rv2368c; COG1702 Phosphate starvation-inducible protein PhoH,; E=2e-65 PFAM: PF02562; PhoH-like protein; E=1.8e-133; phoH-like protein 2349599 1792998 RB4582 Rhodopirellula baltica SH 1 phoH-like protein NP_866184.1 2348451 R 243090 CDS NP_866185.1 32473191 1790531 complement(2349706..2350752) 1 NC_005027.1 PMID: 2995358 PMID: 8557688 PMID: 9083091 best DB hits: BLAST: gb:AAB61972.1; (U60832) CDP-diglyceride synthetase [Haemophilus; E=2e-19 swissprot:P44937; CDSA_HAEIN PHOSPHATIDATE CYTIDYLYLTRANSFERASE; E=3e-19 gb:AAB61967.1; (U60831) CDP diglyceride synthetase [Haemophilus; E=3e-19 COG: HI0919; COG0575 CDP-diglyceride synthetase; E=2e-20 PFAM: PF01148; Phosphatidate cytidylyltransfe; E=5.6e-15; phosphatidate cytidylyltransferase 2350752 cdS 1790531 cdS Rhodopirellula baltica SH 1 phosphatidate cytidylyltransferase NP_866185.1 2349706 R 243090 CDS NP_866186.1 32473192 1790388 complement(2350844..2351362) 1 NC_005027.1 PMID: 7499381 best DB hits: BLAST: swissprot:P80864; TPX_BACSU PROBABLE THIOL PEROXIDASE; E=2e-39 swissprot:P31307; TPX_STRPA PROBABLE THIOL PEROXIDASE -----; E=4e-33 swissprot:P42366; TPX_STRGC PROBABLE THIOL PEROXIDASE -----; E=5e-33 COG: BS_ytgI; COG2077 Thiol peroxidase; E=1e-40 APE2125; COG1225 Peroxiredoxins; E=1e-08 DR2242; COG0450 Thiol - alkyl hydroperoxide reductases; E=1e-05 PFAM: PF00578; AhpC/TSA family; E=9.5e-20; thiol peroxidase 2351362 TPX 1790388 TPX Rhodopirellula baltica SH 1 thiol peroxidase NP_866186.1 2350844 R 243090 CDS NP_866187.1 32473193 1792451 complement(2351461..2351649) 1 NC_005027.1 hypothetical protein 2351649 1792451 RB4589 Rhodopirellula baltica SH 1 hypothetical protein NP_866187.1 2351461 R 243090 CDS NP_866188.1 32473194 1797050 complement(2351800..2352024) 1 NC_005027.1 hypothetical protein 2352024 1797050 RB4590 Rhodopirellula baltica SH 1 hypothetical protein NP_866188.1 2351800 R 243090 CDS NP_866189.1 32473195 1792922 2352125..2352955 1 NC_005027.1 PMID: 2544549 best DB hits: BLAST: pir:S72590; hypothetical protein B1937_F1_25 - Mycobacterium leprae; E=9e-10 pir:A70586; hypothetical protein Rv2362c - Mycobacterium; E=2e-09 ddbj:BAB05088.1; (AP001511) BH1369~unknown conserved protein; E=3e-08 COG: Rv2362c; COG1381 Recombinational DNA repair protein; E=2e-10 PFAM: PF02565; Recombination protein O; E=3.8e-20; DNA repair protein recO 2352955 recO 1792922 recO Rhodopirellula baltica SH 1 DNA repair protein recO NP_866189.1 2352125 D 243090 CDS NP_866190.1 32473196 1792309 2353015..2354229 1 NC_005027.1 signal peptide 2354229 1792309 RB4593 Rhodopirellula baltica SH 1 signal peptide NP_866190.1 2353015 D 243090 CDS NP_866191.1 32473197 1792462 2354226..2354777 1 NC_005027.1 signal peptide 2354777 1792462 RB4595 Rhodopirellula baltica SH 1 signal peptide NP_866191.1 2354226 D 243090 CDS NP_866192.1 32473198 1797069 complement(2354790..2355821) 1 NC_005027.1 PMID: 8953720 best DB hits: BLAST: embl:CAA57770.2; (X82326) malate permease [Oenococcus oeni]; E=0.16 pir:H72378; conserved hypothetical protein - Thermotoga maritima; E=0.19; malate permease 2355821 1797069 RB4597 Rhodopirellula baltica SH 1 malate permease NP_866192.1 2354790 R 243090 CDS NP_866193.1 32473199 1792022 2355806..2356726 1 NC_005027.1 hypothetical protein 2356726 1792022 RB4598 Rhodopirellula baltica SH 1 hypothetical protein NP_866193.1 2355806 D 243090 CDS NP_866194.1 32473200 1796679 2356778..2357734 1 NC_005027.1 hypothetical protein 2357734 1796679 RB4601 Rhodopirellula baltica SH 1 hypothetical protein NP_866194.1 2356778 D 243090 CDS NP_866195.1 32473201 1790110 complement(2357793..2358854) 1 NC_005027.1 hypothetical protein 2358854 1790110 RB4603 Rhodopirellula baltica SH 1 hypothetical protein NP_866195.1 2357793 R 243090 CDS NP_866196.1 32473202 1796376 complement(2358964..2359947) 1 NC_005027.1 PMID: 8098035 PMID: 7853400 PMID: 8081752 best DB hits: BLAST: swissprot:Q07607; MOSA_RHIME MOSA PROTEIN ----- pir: B53308; E=2e-29 embl:CAC24079.1; (AL512981) ORF-c25_010 [Sulfolobus solfataricus]; E=7e-29 pir:S56523; dihydrodipicolinate synthase homolog yjhH - Escherichia; E=1e-28 COG: yjhH; COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate; E=1e-29 PFAM: PF00701; Dihydrodipicolinate synthetase famil; E=2.2e-57; dihydrodipicolinate synthase 2359947 dapA 1796376 dapA Rhodopirellula baltica SH 1 dihydrodipicolinate synthase NP_866196.1 2358964 R 243090 CDS NP_866197.1 32473203 1793039 complement(2359956..2360591) 1 NC_005027.1 PMID: 9371463 best DB hits: BLAST: pir:D69100; probable protein disulfide-isomerase (EC 5.3.4.1); E=5e-08 gb:AAG20098.1; (AE005089) Vng1905c [Halobacterium sp. NRC-1]; E=1e-04 pir:B70456; thioredoxin - Aquifex aeolicus ----- gb:; E=6e-04 COG: MTH1745; COG0526 Thiol-disulfide isomerase and thioredoxins; E=5e-09 VNG1905C; COG1331 Highly conserved protein containing a thioredoxin; E=1e-05 aq_1811; COG0526 Thiol-disulfide isomerase and thioredoxins; E=6e-05; protein disulfide-isomerase 2360591 1793039 RB4606 Rhodopirellula baltica SH 1 protein disulfide-isomerase NP_866197.1 2359956 R 243090 CDS NP_866198.1 32473204 1792449 complement(2360670..2360798) 1 NC_005027.1 hypothetical protein 2360798 1792449 RB4607 Rhodopirellula baltica SH 1 hypothetical protein NP_866198.1 2360670 R 243090 CDS NP_866199.1 32473205 1791486 complement(2360777..2360980) 1 NC_005027.1 hypothetical protein 2360980 1791486 RB4608 Rhodopirellula baltica SH 1 hypothetical protein NP_866199.1 2360777 R 243090 CDS NP_866200.1 32473206 1795017 2360819..2360977 1 NC_005027.1 hypothetical protein 2360977 1795017 RB4609 Rhodopirellula baltica SH 1 hypothetical protein NP_866200.1 2360819 D 243090 CDS NP_866201.1 32473207 1793640 complement(2360999..2361622) 1 NC_005027.1 PMID: 21128732 best DB hits: BLAST: pir:H81795; Holliday junction DNA helicase NMA2221 [imported] -; E=6e-11 pir:B81218; Holliday junction DNA helicase RuvA NMB0265 [imported] -; E=1e-10 pir:D81662; Holliday junction DNA helicase RuvA TC0788 [imported] -; E=8e-09 COG: NMB0265; COG0632 Holliday junction resolvasome DNA-binding subunit; E=1e-11 PFAM: PF02505; Methyl-coenzyme M reductase op; E=0.16 PF01330; RuvA N terminal domain; E=4.3e-05 PF02904; RuvA central domain II; E=1.1e-06; holliday junction DNA helicase ruvA 2361622 ruvA 1793640 ruvA Rhodopirellula baltica SH 1 holliday junction DNA helicase ruvA NP_866201.1 2360999 R 243090 CDS NP_866202.1 32473208 1791023 complement(2361619..2362056) 1 NC_005027.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 2362056 nusB 1791023 nusB Rhodopirellula baltica SH 1 transcription antitermination protein NusB NP_866202.1 2361619 R 243090 CDS NP_866203.1 32473209 1791736 complement(2362178..2362510) 1 NC_005027.1 best DB hits: BLAST: swissprot:O32113; YUTM_BACSU HYPOTHETICAL 12.8 KDA PROTEIN IN; E=5e-19 gb:AAD39571.1; AC007067_11 (AC007067) T10O24.11 [Arabidopsis; E=7e-18 swissprot:O67709; YI57_AQUAE HYPOTHETICAL PROTEIN AQ_1857 -----; E=1e-17 COG: BS_yutM; COG0316 Uncharacterized ACR; E=5e-20 PFAM: PF01521; HesB-like domain; E=8.4e-43; hesB family protein 2362510 1791736 RB4613 Rhodopirellula baltica SH 1 hesB family protein NP_866203.1 2362178 R 243090 CDS NP_866204.1 32473210 1793906 complement(2362491..2362625) 1 NC_005027.1 hypothetical protein 2362625 1793906 RB4614 Rhodopirellula baltica SH 1 hypothetical protein NP_866204.1 2362491 R 243090 CDS NP_866205.1 32473211 1790928 2362647..2362991 1 NC_005027.1 hypothetical protein 2362991 1790928 RB4616 Rhodopirellula baltica SH 1 hypothetical protein NP_866205.1 2362647 D 243090 CDS NP_866206.1 32473212 1794744 2363086..2364531 1 NC_005027.1 best DB hits: BLAST: embl:CAB82869.1; (AJ276673) hypothetical protein [Streptomyces; E=8e-08 ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=1e-07 gb:AAC23913.1; (AF039207) NADH-dependent dehydrogenase homolog; E=5e-07 COG: BH1248; COG0673 Predicted dehydrogenases and related proteins; E=1e-08 PFAM: PF01408; Oxidoreductase, NAD-bin; E=9.6e-18 PF02894; Oxidoreductase, C-termi; E=0.086; NADH-dependent dehydrogenase 2364531 1794744 RB4619 Rhodopirellula baltica SH 1 NADH-dependent dehydrogenase NP_866206.1 2363086 D 243090 CDS NP_866207.1 32473213 1791002 complement(2364675..2369168) 1 NC_005027.1 best DB hits: PFAM: PF00034; Cytochrome c; E=0.003; signal peptide 2369168 1791002 RB4621 Rhodopirellula baltica SH 1 signal peptide NP_866207.1 2364675 R 243090 CDS NP_866208.1 32473214 1794367 complement(2369165..2369338) 1 NC_005027.1 hypothetical protein 2369338 1794367 RB4626 Rhodopirellula baltica SH 1 hypothetical protein NP_866208.1 2369165 R 243090 CDS NP_866209.1 32473215 1795231 complement(2369342..2369515) 1 NC_005027.1 hypothetical protein 2369515 1795231 RB4627 Rhodopirellula baltica SH 1 hypothetical protein NP_866209.1 2369342 R 243090 CDS NP_866210.1 32473216 1794532 complement(2369590..2369868) 1 NC_005027.1 best DB hits: BLAST: pir:D83447; conserved hypothetical protein PA1574 [imported] -; E=5e-21 swissprot:P36768; YAIE_ECOLI HYPOTHETICAL 10.2 KD PROTEIN IN; E=2e-15 pir:A82395; conserved hypothetical protein VCA0970 [imported] -; E=4e-11 COG: PA1574; COG3123 Uncharacterized BCR; E=5e-22; hypothetical protein 2369868 1794532 RB4629 Rhodopirellula baltica SH 1 hypothetical protein NP_866210.1 2369590 R 243090 CDS NP_866211.1 32473217 1791720 complement(2369965..2371299) 1 NC_005027.1 best DB hits: BLAST: gb:AAC38670.2; (AF062345) perosamine synthetase; LpsC; E=9e-10 gb:AAB81626.1; (AF025396) probable perosamine synthetase [Vibrio; E=1e-08 gb:AAD28492.1; AF145039_4 (AF145039) aminotransferase spcS2; E=5e-08 COG: PAB0774; COG0399 Predicted pyridoxal phosphate-dependent enzyme; E=1e-08 PFAM: PF01041; DegT/DnrJ/EryC1/StrS family; E=0.099; aminotransferase 2371299 1791720 RB4631 Rhodopirellula baltica SH 1 aminotransferase NP_866211.1 2369965 R 243090 CDS NP_866212.1 32473218 1791806 2371386..2371805 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB04948.1; (AP001511) BH1229~unknown conserved protein; E=3e-04 gb:AAK02312.1; (AE006057) YajC [Pasteurella multocida]; E=3e-04 pir:D72325; hypothetical protein - Thermotoga maritima (strain MSB8); E=5e-04 COG: BH1229; COG1862 Preprotein translocase subunit YajC; E=3e-05 PFAM: PF02699; Uncharacterized secreted proteins, Y; E=5.5e-17; preprotein translocase subunit yajC 2371805 1791806 RB4632 Rhodopirellula baltica SH 1 preprotein translocase subunit yajC NP_866212.1 2371386 D 243090 CDS NP_866213.1 32473219 1792579 2371842..2375180 1 NC_005027.1 PMID: 10910347 best DB hits: BLAST: pir:A82832; protein-export membrane protein XF0225 [imported] -; E=8e-45 swissprot:Q55610; SECD_SYNY3 PROTEIN-EXPORT MEMBRANE PROTEIN SECD; E=1e-44 swissprot:O67102; SECD_AQUAE PROTEIN-EXPORT MEMBRANE PROTEIN SECD; E=3e-42 COG: XF0225; COG0342 Preprotein translocase subunit SecD; E=7e-46 PFAM: PF02355; Protein export membrane protein; E=0.012 PF00654; Voltage gated chloride channel; E=0.18 PF02355; Protein export membrane protein; E=6.6e-66; protein-export membrane protein secD 2375180 secD 1792579 secD Rhodopirellula baltica SH 1 protein-export membrane protein secD NP_866213.1 2371842 D 243090 CDS NP_866214.1 32473220 1790157 complement(2374181..2374681) 1 NC_005027.1 signal peptide 2374681 1790157 RB4636 Rhodopirellula baltica SH 1 signal peptide NP_866214.1 2374181 R 243090 CDS NP_866215.1 32473221 1790411 2375327..2376823 1 NC_005027.1 PMID: 7910580 PMID: 2303452 best DB hits: BLAST: embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=3e-41 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=3e-41 pdb:1E2S; P Chain P, Crystal Structure Of An Arylsulfatase A; E=3e-40 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=6e-29 HI1246; COG1368 Phosphoglycerol transferase and related proteins,; E=4e-05 VNG0061C; COG3119 Arylsulfatase A and related enzymes; E=5e-04 PFAM: PF00884; Sulfatase; E=2.4e-48; arylsulphatase A 2376823 aslA 1790411 aslA Rhodopirellula baltica SH 1 arylsulphatase A NP_866215.1 2375327 D 243090 CDS NP_866216.1 32473222 1795584 2376830..2377000 1 NC_005027.1 hypothetical protein 2377000 1795584 RB4639 Rhodopirellula baltica SH 1 hypothetical protein NP_866216.1 2376830 D 243090 CDS NP_866217.1 32473223 1790538 complement(2377043..2377399) 1 NC_005027.1 hypothetical protein 2377399 1790538 RB4640 Rhodopirellula baltica SH 1 hypothetical protein NP_866217.1 2377043 R 243090 CDS NP_866218.1 32473224 1795951 complement(2377086..2377328) 1 NC_005027.1 hypothetical protein 2377328 1795951 RB4641 Rhodopirellula baltica SH 1 hypothetical protein NP_866218.1 2377086 R 243090 CDS NP_866219.1 32473225 1793929 2377301..2377558 1 NC_005027.1 PMID: 11679351; hypothetical protein 2377558 1793929 RB4642 Rhodopirellula baltica SH 1 hypothetical protein NP_866219.1 2377301 D 243090 CDS NP_866220.1 32473226 1791449 2377555..2377845 1 NC_005027.1 hypothetical protein 2377845 1791449 RB4643 Rhodopirellula baltica SH 1 hypothetical protein NP_866220.1 2377555 D 243090 CDS NP_866221.1 32473227 1796652 2377769..2378095 1 NC_005027.1 hypothetical protein 2378095 1796652 RB4644 Rhodopirellula baltica SH 1 hypothetical protein NP_866221.1 2377769 D 243090 CDS NP_866222.1 32473228 1795832 complement(2378057..2378266) 1 NC_005027.1 hypothetical protein 2378266 1795832 RB4645 Rhodopirellula baltica SH 1 hypothetical protein NP_866222.1 2378057 R 243090 CDS NP_866223.1 32473229 1791892 complement(2378286..2378894) 1 NC_005027.1 PMID: 2562384 best DB hits: BLAST: pir:A83632; cytochrome c oxidase, subunit III PA0108 [imported] -; E=6e-04 gb:AAG19157.1; (AE005013) cytochrome c oxidase subunit III; CoxC; E=0.007 gb:AAC09434.1; (M68929) coxIII [Marchantia polymorpha]; E=0.059 COG: PA0108; COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit; E=6e-05 VNG0662G; COG1845 Heme/copper-type cytochrome/quinol oxidase,; E=7e-04 PFAM: PF00510; Cytochrome c oxidase subunit III; E=0.55; cytochrome c oxidase, subunit III 2378894 cox3 1791892 cox3 Rhodopirellula baltica SH 1 cytochrome c oxidase, subunit III NP_866223.1 2378286 R 243090 CDS NP_866224.1 32473230 1796785 2378986..2379429 1 NC_005027.1 hypothetical protein 2379429 1796785 RB4648 Rhodopirellula baltica SH 1 hypothetical protein NP_866224.1 2378986 D 243090 CDS NP_866225.1 32473231 1794351 complement(2379014..2379238) 1 NC_005027.1 hypothetical protein 2379238 1794351 RB4649 Rhodopirellula baltica SH 1 hypothetical protein NP_866225.1 2379014 R 243090 CDS NP_866226.1 32473232 1795077 complement(2379380..2379601) 1 NC_005027.1 hypothetical protein 2379601 1795077 RB4650 Rhodopirellula baltica SH 1 hypothetical protein NP_866226.1 2379380 R 243090 CDS NP_866227.1 32473233 1794534 complement(2379598..2380461) 1 NC_005027.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 2380461 thiG 1794534 thiG Rhodopirellula baltica SH 1 thiazole synthase NP_866227.1 2379598 R 243090 CDS NP_866228.1 32473234 1795189 2380494..2380652 1 NC_005027.1 hypothetical protein 2380652 1795189 RB4652 Rhodopirellula baltica SH 1 hypothetical protein NP_866228.1 2380494 D 243090 CDS NP_866229.1 32473235 1794477 complement(2380658..2380870) 1 NC_005027.1 best DB hits: BLAST: pir:D83599; conserved hypothetical protein PA0380 [imported] -; E=5e-07 pir:T35489; hypothetical protein SC6E10.02 - Streptomyces; E=2e-06 gb:AAC08230.1; (U38804) ORF71 [Porphyra purpurea]; E=1e-05 COG: PA0380; COG2104 Uncharacterized ACR, possibly involved in thiamine; E=5e-08 ssr0102; COG2104 Uncharacterized ACR, possibly involved in; E=0.001 thiS; COG2104 Uncharacterized ACR, possibly involved in thiamine; E=0.006 PFAM: PF02597; Uncharacterized ACR, COG2104; E=2e-11; hypothetical protein 2380870 1794477 RB4653 Rhodopirellula baltica SH 1 hypothetical protein NP_866229.1 2380658 R 243090 CDS NP_866230.1 32473236 1791028 complement(2380867..2381871) 1 NC_005027.1 best DB hits: BLAST: pir:T34928; hypothetical protein SC3F9.06 SC3F9.06 - Streptomyces; E=1e-112 ddbj:BAB04968.1; (AP001511) BH1249~unknown conserved protein; E=2e-10 swissprot:P54724; YFIH_BACSU HYPOTHETICAL 34.8 KD PROTEIN IN GLVBC; E=2e-08; hypothetical protein 2381871 1791028 RB4654 Rhodopirellula baltica SH 1 hypothetical protein NP_866230.1 2380867 R 243090 CDS NP_866231.1 32473237 1794661 2381865..2382236 1 NC_005027.1 hypothetical protein 2382236 1794661 RB4657 Rhodopirellula baltica SH 1 hypothetical protein NP_866231.1 2381865 D 243090 CDS NP_866232.1 32473238 1794295 complement(2382199..2382780) 1 NC_005027.1 best DB hits: BLAST: embl:CAB16799.1; (Z99707) protein [Arabidopsis thaliana]; E=7e-05 swissprot:Q58622; YC25_METJA HYPOTHETICAL PROTEIN MJ1225 -----; E=2e-04 pir:E82251; inosine monophosphate dehydrogenase-related protein; E=3e-04 COG: MJ1225; COG0517 CBS domains; E=2e-05 MTH126; COG2524 Predicted transcriptional regulator with C-terminal; E=8e-05 aq_2023_2; COG0517 CBS domains; E=1e-04 PFAM: PF00571; CBS domain; E=1.6e-11; inosine monophosphate dehydrogenase-like protein 2382780 1794295 RB4658 Rhodopirellula baltica SH 1 inosine monophosphate dehydrogenase-like protein NP_866232.1 2382199 R 243090 CDS NP_866233.1 32473239 1792864 complement(2382777..2382941) 1 NC_005027.1 hypothetical protein 2382941 1792864 RB4659 Rhodopirellula baltica SH 1 hypothetical protein NP_866233.1 2382777 R 243090 CDS NP_866234.1 32473240 1793769 2382949..2383479 1 NC_005027.1 hypothetical protein 2383479 1793769 RB4660 Rhodopirellula baltica SH 1 hypothetical protein NP_866234.1 2382949 D 243090 CDS NP_866235.1 32473241 1796819 complement(2383544..2383750) 1 NC_005027.1 hypothetical protein 2383750 1796819 RB4661 Rhodopirellula baltica SH 1 hypothetical protein NP_866235.1 2383544 R 243090 CDS NP_866236.1 32473242 1795758 2383563..2383676 1 NC_005027.1 signal peptide 2383676 1795758 RB4662 Rhodopirellula baltica SH 1 signal peptide NP_866236.1 2383563 D 243090 CDS NP_866237.1 32473243 1794600 2383642..2384796 1 NC_005027.1 hypothetical protein 2384796 1794600 RB4663 Rhodopirellula baltica SH 1 hypothetical protein NP_866237.1 2383642 D 243090 CDS NP_866238.1 32473244 1790795 complement(2384918..2386273) 1 NC_005027.1 best DB hits: BLAST: gb:AAB89850.1; (AE001008) conserved hypothetical protein; E=0.24; hypothetical protein 2386273 1790795 RB4667 Rhodopirellula baltica SH 1 hypothetical protein NP_866238.1 2384918 R 243090 CDS NP_866239.1 32473245 1793679 complement(2386422..2387993) 1 NC_005027.1 best DB hits: BLAST: gb:AAF82144.1; AC034256_8 (AC034256) Contains similarity to F-box; E=8e-04 ddbj:BAB21785.1; (AB051481) KIAA1694 protein [Homo sapiens]; E=0.40; hypothetical protein 2387993 1793679 RB4670 Rhodopirellula baltica SH 1 hypothetical protein NP_866239.1 2386422 R 243090 CDS NP_866240.1 32473246 1797025 complement(2388047..2388583) 1 NC_005027.1 PMID: 1657895 PMID: 1885548 PMID: 1758493 PMID: 9442895 best DB hits: BLAST: pir:H82149; crossover junction endodeoxyribonuclease RuvC VC1847; E=6e-19 swissprot:O83530; RUVC_TREPA CROSSOVER JUNCTION; E=8e-19 pir:F81271; crossover junction endodeoxyribonuclease (EC 3.1.22.4); E=2e-16 COG: VC1847; COG0817 Holliday junction resolvasome endonuclease subunit; E=6e-20 PFAM: PF02075; Crossover junction endodeoxyribonucl; E=1.1e-46; crossover junction endodeoxyribonuclease ruvC 2388583 ruvC 1797025 ruvC Rhodopirellula baltica SH 1 crossover junction endodeoxyribonuclease ruvC NP_866240.1 2388047 R 243090 CDS NP_866241.1 32473247 1792243 complement(2388565..2390451) 1 NC_005027.1 PMID: 2014166 PMID: 1864365 best DB hits: BLAST: gb:AAK03029.1; (AE006134) CysS [Pasteurella multocida]; E=5e-91 swissprot:Q9KGF4; SYC_BACHD CYSTEINYL-TRNA SYNTHETASE; E=2e-89 swissprot:O58370; SYC_PYRHO CYSTEINYL-TRNA SYNTHETASE; E=3e-88 COG: BH0111; COG0215 Cysteinyl-tRNA synthetase; E=2e-90 PFAM: PF01406; tRNA synthetases class I (C); E=1.8e-122; cysteinyl-tRNA synthetase 2390451 cysS 1792243 cysS Rhodopirellula baltica SH 1 cysteinyl-tRNA synthetase NP_866241.1 2388565 R 243090 CDS NP_866242.1 32473248 1790419 complement(2390414..2391079) 1 NC_005027.1 hypothetical protein 2391079 1790419 RB4676 Rhodopirellula baltica SH 1 hypothetical protein NP_866242.1 2390414 R 243090 CDS NP_866243.1 32473249 1794902 2390618..2391217 1 NC_005027.1 signal peptide 2391217 1794902 RB4678 Rhodopirellula baltica SH 1 signal peptide NP_866243.1 2390618 D 243090 CDS NP_866244.1 32473250 1793816 2391214..2391741 1 NC_005027.1 best DB hits: PFAM: PF01336; OB-fold nucleic acid binding domain; E=0.015; signal peptide 2391741 1793816 RB4679 Rhodopirellula baltica SH 1 signal peptide NP_866244.1 2391214 D 243090 CDS NP_866245.1 32473251 1791516 2391934..2392131 1 NC_005027.1 PMID: 90231432 PMID: 94293754 best DB hits: BLAST: swissprot:P48859; CSPF_STRCO COLD SHOCK PROTEIN SCOF -----; E=8e-10 embl:CAB76978.1; (AL159178) cold-shock protein [Streptomyces; E=2e-09 pir:T34593; cold-shock domain protein - Streptomyces coelicolor; E=1e-08 COG: XF2352; COG1278 Cold shock proteins; E=2e-08 PFAM: PF00313; 'Cold-shock' DNA-binding domain; E=2.2e-19; cold shock protein scoF 2392131 1791516 RB4681 Rhodopirellula baltica SH 1 cold shock protein scoF NP_866245.1 2391934 D 243090 CDS NP_866246.1 32473252 1790108 2392260..2392727 1 NC_005027.1 hypothetical protein 2392727 1790108 RB4682 Rhodopirellula baltica SH 1 hypothetical protein NP_866246.1 2392260 D 243090 CDS NP_866247.1 32473253 1795486 complement(2392889..2395486) 1 NC_005027.1 best DB hits: PFAM: PF00515; TPR Domain; E=0.00063; hypothetical protein 2395486 1795486 RB4685 Rhodopirellula baltica SH 1 hypothetical protein NP_866247.1 2392889 R 243090 CDS NP_866248.1 32473254 1792068 2395001..2395855 1 NC_005027.1 hypothetical protein 2395855 1792068 RB4691 Rhodopirellula baltica SH 1 hypothetical protein NP_866248.1 2395001 D 243090 CDS NP_866249.1 32473255 1793584 2395824..2396198 1 NC_005027.1 best DB hits: BLAST: pir:S31926; myosin IB heavy chain, brush border - chicken -----; E=0.12; hypothetical protein 2396198 1793584 RB4692 Rhodopirellula baltica SH 1 hypothetical protein NP_866249.1 2395824 D 243090 CDS NP_866250.1 32473256 1791292 2396117..2397352 1 NC_005027.1 PMID: 2898203 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 2397352 1791292 RB4694 Rhodopirellula baltica SH 1 signal peptide NP_866250.1 2396117 D 243090 CDS NP_866251.1 32473257 1796530 2397357..2397539 1 NC_005027.1 signal peptide 2397539 1796530 RB4697 Rhodopirellula baltica SH 1 signal peptide NP_866251.1 2397357 D 243090 CDS NP_866252.1 32473258 1793055 2397601..2397861 1 NC_005027.1 hypothetical protein 2397861 1793055 RB4698 Rhodopirellula baltica SH 1 hypothetical protein NP_866252.1 2397601 D 243090 CDS NP_866253.1 32473259 1795501 complement(2397798..2400146) 1 NC_005027.1 PMID: 7528875 best DB hits: BLAST: ddbj:BAB04561.1; (AP001510) BH0842~unknown conserved protein; E=2e-09 embl:CAB56146.1; (AL117669) large secreted protein; E=7e-07 embl:CAB91126.1; (AL355913) hypothetical protein SC5H4.14; E=0.17; hypothetical protein 2400146 1795501 RB4699 Rhodopirellula baltica SH 1 hypothetical protein NP_866253.1 2397798 R 243090 CDS NP_866254.1 32473260 1790916 complement(2400274..2401710) 1 NC_005027.1 PMID: 10509949 best DB hits: BLAST: pir:B75555; probable lipaseesterase - Deinococcus radiodurans; E=6e-08 swissprot:Q04457; EST1_CAEEL GUT ESTERASE PRECURSOR (NON-SPECIFIC; E=9e-06 pir:T32061; gut-specific carboxylesterase ges-1 - Caenorhabditis; E=9e-06 COG: DR0133; COG0657 Acetyl esterase; E=6e-09; lipase/esterase 2401710 1790916 RB4702 Rhodopirellula baltica SH 1 lipase/esterase NP_866254.1 2400274 R 243090 CDS NP_866255.1 32473261 1791929 2401532..2403604 1 NC_005027.1 hypothetical protein 2403604 1791929 RB4703 Rhodopirellula baltica SH 1 hypothetical protein NP_866255.1 2401532 D 243090 CDS NP_866256.1 32473262 1793283 2403601..2403714 1 NC_005027.1 hypothetical protein 2403714 1793283 RB4704 Rhodopirellula baltica SH 1 hypothetical protein NP_866256.1 2403601 D 243090 CDS NP_866257.1 32473263 1792888 complement(2403694..2403864) 1 NC_005027.1 hypothetical protein 2403864 1792888 RB4705 Rhodopirellula baltica SH 1 hypothetical protein NP_866257.1 2403694 R 243090 CDS NP_866258.1 32473264 1790640 complement(2403890..2404960) 1 NC_005027.1 best DB hits: BLAST: embl:CAB45032.1; (AL078635) large multi-functional; E=6e-13 embl:CAB58265.1; (AL121849) multi-domain protein; E=3e-10; large multifunctional protein- glycosyl hydrolase 2404960 1790640 RB4707 Rhodopirellula baltica SH 1 large multifunctional protein- glycosyl hydrolase NP_866258.1 2403890 R 243090 CDS NP_866259.1 32473265 1796670 complement(2404884..2405132) 1 NC_005027.1 hypothetical protein 2405132 1796670 RB4709 Rhodopirellula baltica SH 1 hypothetical protein NP_866259.1 2404884 R 243090 CDS NP_866260.1 32473266 1796804 2405152..2405601 1 NC_005027.1 PMID: 11823852 best DB hits: BLAST: gb:AAK02297.1; (AE006055) unknown [Pasteurella multocida]; E=0.011 pir:E83286; conserved hypothetical protein PA2864 [imported] -; E=0.018 pir:B81002; conserved hypothetical protein NMB2140 [imported] -; E=0.033 COG: PA2864; COG2259 Predicted membrane protein; E=0.002 NMB2140; COG3229 Uncharacterized membrane protein; E=0.003 Rv3005c; COG2259 Predicted membrane protein; E=0.010; hypothetical protein 2405601 1796804 RB4711 Rhodopirellula baltica SH 1 hypothetical protein NP_866260.1 2405152 D 243090 CDS NP_866261.1 32473267 1792842 2405757..2406704 1 NC_005027.1 PMID: 97000351 best DB hits: BLAST: embl:CAB61593.1; (AL133210) hypothetical protein SCG11A.12; E=2e-59 pir:T35546; hypothetical protein SC6G3.02 - Streptomyces coelicolor; E=2e-36; hypothetical protein 2406704 1792842 RB4712 Rhodopirellula baltica SH 1 hypothetical protein NP_866261.1 2405757 D 243090 CDS NP_866262.1 32473268 1791408 2406701..2411998 1 NC_005027.1 PMID: 97000351 best DB hits: BLAST: embl:CAB61594.1; (AL133210) hypothetical protein SCG11A.13; E=1e-63 pir:T35547; hypothetical protein SC6G3.03 - Streptomyces coelicolor; E=1e-25; hypothetical protein 2411998 1791408 RB4713 Rhodopirellula baltica SH 1 hypothetical protein NP_866262.1 2406701 D 243090 CDS NP_866263.1 32473269 1795147 2412041..2413339 1 NC_005027.1 PMID: 97000351 best DB hits: BLAST: embl:CAB61595.1; (AL133210) hypothetical protein SCG11A.14; E=3e-96 gb:AAG57184.1; AE005439_3 (AE005439) orf, hypothetical protein; E=1e-69 swissprot:P33348; YEHL_ECOLI HYPOTHETICAL 42.4 KD PROTEIN IN; E=3e-69 COG: yehL; COG0714 MoxR-like ATPases; E=3e-70; hypothetical protein 2413339 1795147 RB4714 Rhodopirellula baltica SH 1 hypothetical protein NP_866263.1 2412041 D 243090 CDS NP_866264.1 32473270 1795371 2413294..2417169 1 NC_005027.1 best DB hits: BLAST: pir:T35548; hypothetical protein SC6G3.04 - Streptomyces coelicolor; E=1e-145 embl:CAB61596.1; (AL133210) hypothetical protein SCG11A.15; E=5e-93 swissprot:P33352; YEHP_ECOLI HYPOTHETICAL 42.1 KD PROTEIN IN; E=5e-27; hypothetical protein 2417169 1795371 RB4715 Rhodopirellula baltica SH 1 hypothetical protein NP_866264.1 2413294 D 243090 CDS NP_866265.1 32473271 1791154 2416977..2419019 1 NC_005027.1 best DB hits: BLAST: pir:T35549; hypothetical protein SC6G3.05 - Streptomyces coelicolor; E=4e-13; hypothetical protein 2419019 1791154 RB4716 Rhodopirellula baltica SH 1 hypothetical protein NP_866265.1 2416977 D 243090 CDS NP_866266.1 32473272 1794428 complement(2419112..2419276) 1 NC_005027.1 hypothetical protein 2419276 1794428 RB4719 Rhodopirellula baltica SH 1 hypothetical protein NP_866266.1 2419112 R 243090 CDS NP_866267.1 32473273 1794392 2419331..2420059 1 NC_005027.1 best DB hits: BLAST: pir:S77109; hypothetical protein slr1870 - Synechocystis sp. (strain; E=1e-63 pir:D81437; hypothetical protein Cj0189c [imported] - Campylobacter; E=2e-24 pir:C71266; conserved hypothetical protein TP0894 - syphilis; E=8e-20 COG: slr1870; COG1432 Uncharacterized ACR; E=1e-64; hypothetical protein 2420059 1794392 RB4721 Rhodopirellula baltica SH 1 hypothetical protein NP_866267.1 2419331 D 243090 CDS NP_866268.1 32473274 1791226 complement(2420005..2420253) 1 NC_005027.1 hypothetical protein 2420253 1791226 RB4722 Rhodopirellula baltica SH 1 hypothetical protein NP_866268.1 2420005 R 243090 CDS NP_866269.1 32473275 1794742 2420330..2420698 1 NC_005027.1 hypothetical protein 2420698 1794742 RB4723 Rhodopirellula baltica SH 1 hypothetical protein NP_866269.1 2420330 D 243090 CDS NP_866270.1 32473276 1791589 2420720..2421355 1 NC_005027.1 PMID: 95126562 PMID: 94254732 PMID: 93155125 best DB hits: BLAST: embl:CAC03633.1; (AL391338) TetR-family transcriptional; E=2e-14 pir:E70831; probable transcriptional regulator Rv0452 - Mycobacterium; E=2e-10 pir:E75525; transcriptional regulator, TetR family - Deinococcus; E=8e-08 COG: Rv0452; COG1309 Transcriptional regulator; E=2e-11 PFAM: PF00440; Bacterial regulatory proteins; E=9e-14; TetR family transcriptional regulator 2421355 1791589 RB4724 Rhodopirellula baltica SH 1 TetR family transcriptional regulator NP_866270.1 2420720 D 243090 CDS NP_866271.1 32473277 1792627 2421395..2422342 1 NC_005027.1 PMID: 95260797 PMID: 81247357 best DB hits: BLAST: gb:AAG19016.1; (AE005001) probable oxidoreductase; YajO1; E=8e-35 pir:C70863; hypothetical protein Rv2263 - Mycobacterium tuberculosis; E=2e-32 pir:H70829; hypothetical protein Rv0439c - Mycobacterium; E=7e-32 COG: VNG0479G; COG1028 Dehydrogenases with different specificities; E=8e-36 Rv2263; COG1028 Dehydrogenases with different specificities (related; E=1e-33 Rv0439c; COG1028 Dehydrogenases with different specificities; E=7e-33 PFAM: PF00106; short chain dehydrogenase; E=6.1e-26; oxidoreductase yajO1 2422342 1792627 RB4725 Rhodopirellula baltica SH 1 oxidoreductase yajO1 NP_866271.1 2421395 D 243090 CDS NP_866272.1 32473278 1795103 2422602..2422766 1 NC_005027.1 hypothetical protein 2422766 1795103 RB4727 Rhodopirellula baltica SH 1 hypothetical protein NP_866272.1 2422602 D 243090 CDS NP_866273.1 32473279 1793230 complement(2422809..2423843) 1 NC_005027.1 PMID: 11410353 PMID: 10627033 PMID: 10496921 PMID: 9001395 best DB hits: BLAST: pir:G71532; probable threoninetyrosine-specific protein kinase (EC; E=1e-25 gb:AAF73573.1; (AE002326) serinethreonine protein kinase; E=5e-22 pir:T36501; probable serinethreonine protein kinase - Streptomyces; E=3e-20 COG: CT301_1; COG0515 Serine/threonine protein kinases; E=1e-26 PFAM: PF02473; Oxygen-independent Coproporphy; E=0.8 PF00069; Protein kinase domain; E=5.9e-29; serine/threonine kinase 2423843 1793230 RB4728 Rhodopirellula baltica SH 1 serine/threonine kinase NP_866273.1 2422809 R 243090 CDS NP_866274.1 32473280 1795033 complement(2423840..2424757) 1 NC_005027.1 signal peptide 2424757 1795033 RB4729 Rhodopirellula baltica SH 1 signal peptide NP_866274.1 2423840 R 243090 CDS NP_866275.1 32473281 1791978 2424786..2426309 1 NC_005027.1 hypothetical protein 2426309 1791978 RB4730 Rhodopirellula baltica SH 1 hypothetical protein NP_866275.1 2424786 D 243090 CDS NP_866276.1 32473282 1794209 complement(2426440..2426946) 1 NC_005027.1 PMID: 11466286 PMID: 95337427 PMID: 95218635 best DB hits: BLAST: pir:T36945; hypothetical protein SCJ1.12 - Streptomyces coelicolor; E=0.27 swissprot:P95014; AROK_MYCTU SHIKIMATE KINASE (SK) -----; E=0.40 PFAM: PF01202; Shikimate kinase; E=0.52; shikimate kinase 2426946 1794209 RB4732 Rhodopirellula baltica SH 1 shikimate kinase NP_866276.1 2426440 R 243090 CDS NP_866277.1 32473283 1796699 complement(2427014..2427235) 1 NC_005027.1 hypothetical protein 2427235 1796699 RB4735 Rhodopirellula baltica SH 1 hypothetical protein NP_866277.1 2427014 R 243090 CDS NP_866278.1 32473284 1792104 2427190..2427678 1 NC_005027.1 hypothetical protein 2427678 1792104 RB4736 Rhodopirellula baltica SH 1 hypothetical protein NP_866278.1 2427190 D 243090 CDS NP_866279.1 32473285 1790651 2427878..2428978 1 NC_005027.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate; fructose-bisphosphate aldolase 2428978 fbaB 1790651 fbaB Rhodopirellula baltica SH 1 fructose-bisphosphate aldolase NP_866279.1 2427878 D 243090 CDS NP_866280.1 32473286 1792028 complement(2429016..2430029) 1 NC_005027.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 2430029 1792028 RB4738 Rhodopirellula baltica SH 1 dihydroorotate dehydrogenase 2 NP_866280.1 2429016 R 243090 CDS NP_866281.1 32473287 1795121 complement(2430063..2431604) 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:A83058; conserved hypothetical protein PA4701 [imported] -; E=5e-90 gb:AAF00966.1; AF183408_14 (AF183408) Uma3 [Microcystis; E=1e-87 pir:S76584; hypothetical protein - Synechocystis sp. (strain PCC; E=1e-68 COG: PA4701_1; COG2187 Uncharacterized BCR; E=3e-60 PA4701_2; COG0645 Predicted kinase; E=1e-24 PFAM: PF00277; Serum amyloid A protein; E=0.24 PF01583; Adenylylsulfate kinase; E=0.43; hypothetical protein 2431604 1795121 RB4739 Rhodopirellula baltica SH 1 hypothetical protein NP_866281.1 2430063 R 243090 CDS NP_866282.1 32473288 1790840 2431814..2431966 1 NC_005027.1 hypothetical protein 2431966 1790840 RB4740 Rhodopirellula baltica SH 1 hypothetical protein NP_866282.1 2431814 D 243090 CDS NP_866283.1 32473289 1797053 complement(2431918..2432364) 1 NC_005027.1 signal peptide 2432364 1797053 RB4741 Rhodopirellula baltica SH 1 signal peptide NP_866283.1 2431918 R 243090 CDS NP_866284.1 32473290 1791857 complement(2432615..2433589) 1 NC_005027.1 PMID: 7542800 best DB hits: BLAST: pir:H82491; conserved hypothetical protein VCA0159 [imported] -; E=2e-29 pir:G64029; hypothetical protein HI1426 - Haemophilus influenzae; E=1e-20 swissprot:P44195; YDAA_HAEIN HYPOTHETICAL PROTEIN HI1426; E=1e-20 COG: VCA0159; COG0589 Universal stress protein UspA and related; E=2e-30 PFAM: PF00582; Universal stress protein family; E=0.0026; hypothetical protein 2433589 1791857 RB4742 Rhodopirellula baltica SH 1 hypothetical protein NP_866284.1 2432615 R 243090 CDS NP_866285.1 32473291 1795664 complement(2433604..2434533) 1 NC_005027.1 best DB hits: BLAST: pir:A69220; conserved hypothetical protein MTH898 - Methanobacterium; E=6e-10 gb:AAK05956.1; AE006416_1 (AE006416) conserved hypothetical; E=8e-07 pir:A69233; conserved hypothetical protein MTH993 - Methanobacterium; E=3e-06 COG: MTH898; COG0589 Universal stress protein UspA and related; E=6e-11 PFAM: PF00582; Universal stress protein family; E=5.4e-13; hypothetical protein 2434533 1795664 RB4744 Rhodopirellula baltica SH 1 hypothetical protein NP_866285.1 2433604 R 243090 CDS NP_866286.1 32473292 1795807 complement(2434530..2434712) 1 NC_005027.1 hypothetical protein 2434712 1795807 RB4746 Rhodopirellula baltica SH 1 hypothetical protein NP_866286.1 2434530 R 243090 CDS NP_866287.1 32473293 1790464 2435328..2435465 1 NC_005027.1 hypothetical protein 2435465 1790464 RB4748 Rhodopirellula baltica SH 1 hypothetical protein NP_866287.1 2435328 D 243090 CDS NP_866288.1 32473294 1793372 complement(2435456..2436445) 1 NC_005027.1 PMID: 90319059 PMID: 94089375 best DB hits: BLAST: ddbj:BAA13425.1; (D87664) DNA polymerase X [Thermus; E=1e-09 embl:CAC11891.1; (AL445065) DNA-dependent DNA polymerase X; E=1e-08 pir:G69172; DNA-dependent DNA polymerase X - Methanobacterium; E=6e-08 COG: Ta0758_1; COG1796 DNA polymerase IV (family X); E=1e-09; DNA polymerase X protein 2436445 POL4 1793372 POL4 Rhodopirellula baltica SH 1 DNA polymerase X protein NP_866288.1 2435456 R 243090 CDS NP_866289.1 32473295 1792391 2435462..2436076 1 NC_005027.1 signal peptide 2436076 1792391 RB4750 Rhodopirellula baltica SH 1 signal peptide NP_866289.1 2435462 D 243090 CDS NP_866290.1 32473296 1797047 complement(2436459..2437538) 1 NC_005027.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 2437538 pyrD 1797047 pyrD Rhodopirellula baltica SH 1 dihydroorotate dehydrogenase 2 NP_866290.1 2436459 R 243090 CDS NP_866291.1 32473297 1793725 2437483..2437713 1 NC_005027.1 hypothetical protein 2437713 1793725 RB4753 Rhodopirellula baltica SH 1 hypothetical protein NP_866291.1 2437483 D 243090 CDS NP_866292.1 32473298 1793196 2437589..2437765 1 NC_005027.1 hypothetical protein 2437765 1793196 RB4754 Rhodopirellula baltica SH 1 hypothetical protein NP_866292.1 2437589 D 243090 CDS NP_866293.1 32473299 1793773 2437784..2438053 1 NC_005027.1 best DB hits: BLAST: embl:CAB54060.1; (AJ245436) hypothetical protein, 91.9 kD; E=0.19 pir:A82290; clpB protein VC0711 [imported] - Vibrio cholerae (group; E=0.55 embl:CAB93414.1; (AL357524) integrase [Streptomyces; E=0.64; hypothetical protein 2438053 1793773 RB4756 Rhodopirellula baltica SH 1 hypothetical protein NP_866293.1 2437784 D 243090 CDS NP_866294.1 32473300 1790171 2438070..2438423 1 NC_005027.1 hypothetical protein 2438423 1790171 RB4757 Rhodopirellula baltica SH 1 hypothetical protein NP_866294.1 2438070 D 243090 CDS NP_866295.1 32473301 1795086 2438505..2440034 1 NC_005027.1 PMID: 8346225 best DB hits: BLAST: swissprot:Q06067; ATOS_ECOLI SENSOR PROTEIN ATOS ----- pir:; E=1e-26 gb:AAF33505.1; (AF170176) Salmonella typhimurium sensor protein; E=3e-25 gb:AAG59806.1; AF305914_1 (AF305914) HydH [Klebsiella oxytoca]; E=1e-24 COG: atoS_3; COG0642 Sensory transduction histidine kinases; E=1e-27 PFAM: PF00072; Response regulator receiver doma; E=2.2e-12 PF00989; PAS domain; E=1.6e-06 PF00785; PAC motif; E=0.00084; sensor protein atoS 2440034 atoS 1795086 atoS Rhodopirellula baltica SH 1 sensor protein atoS NP_866295.1 2438505 D 243090 CDS NP_866296.1 32473302 1793374 2439910..2441166 1 NC_005027.1 PMID: 2046550 PMID: 1766374 best DB hits: BLAST: swissprot:P26489; FIXL_AZOCA SENSOR PROTEIN FIXL ----- pir:; E=2e-48 swissprot:P23222; FIXL_BRAJA SENSOR PROTEIN FIXL ----- pir:; E=8e-45 swissprot:P10955; FIXL_RHIME SENSOR PROTEIN FIXL ----- pir:; E=2e-43 COG: BS_ykrQ_3; COG0642 Sensory transduction histidine kinases; E=3e-27 PFAM: PF00989; PAS domain; E=1.3e-13 PF00785; PAC motif; E=0.052 PF00512; His Kinase A (phosphoacceptor) doma; E=4.1e-09; sensor protein fixL 2441166 1793374 RB4759 Rhodopirellula baltica SH 1 sensor protein fixL NP_866296.1 2439910 D 243090 CDS NP_866297.1 32473303 1795852 2441163..2441921 1 NC_005027.1 PMID: 3003689 PMID: 2997779 best DB hits: BLAST: pdb:1SRR; A Chain A, Crystal Structure Of A Phosphatase Resistant; E=3e-12 swissprot:P06628; SP0F_BACSU SPORULATION INITIATION; E=5e-12 pdb:1F51; E Chain E, A Transient Interaction Between Two; E=8e-12 COG: BS_spo0F; COG0784 CheY-like receiver domains; E=4e-13 PA4381; COG0745 Response regulators consisting of a CheY-like; E=5e-11 rcsC_3; COG0784 CheY-like receiver domains; E=5e-11 PFAM: PF00072; Response regulator receiver doma; E=2.5e-23 PF02310; B12 binding domain; E=0.14 PF00072; Response regulator receiver doma; E=4.8e-08; sporulation initiation phosphotransferase F 2441921 1795852 RB4760 Rhodopirellula baltica SH 1 sporulation initiation phosphotransferase F NP_866297.1 2441163 D 243090 CDS NP_866298.1 32473304 1797033 complement(2441926..2442513) 1 NC_005027.1 PMID: 9784136 best DB hits: BLAST: pir:H71494; probable thiol-disulfide interchange protein dsbD; E=0.009 pir:H72034; thiol-disulfide interchange protein dsbD [imported] -; E=0.084 pir:G81503; thiol-disulfide interchange protein DSbD homolog CP1086; E=0.084 COG: CT595; COG0526 Thiol-disulfide isomerase and thioredoxins; E=8e-04; thiol-disulfide interchange protein dsbD 2442513 1797033 RB4763 Rhodopirellula baltica SH 1 thiol-disulfide interchange protein dsbD NP_866298.1 2441926 R 243090 CDS NP_866299.1 32473305 1790477 complement(2442599..2442991) 1 NC_005027.1 signal peptide 2442991 1790477 RB4766 Rhodopirellula baltica SH 1 signal peptide NP_866299.1 2442599 R 243090 CDS NP_866300.1 32473306 1793879 complement(2443052..2444524) 1 NC_005027.1 hypothetical protein 2444524 1793879 RB4769 Rhodopirellula baltica SH 1 hypothetical protein NP_866300.1 2443052 R 243090 CDS NP_866301.1 32473307 1791181 complement(2444720..2446432) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB06427.1; (AP001516) ABC transporter [Bacillus halodurans]; E=3e-69 pir:H69086; ABC transporter - Methanobacterium thermoautotrophicum; E=2e-66 pir:D83014; conserved hypothetical protein PA5065 [imported] -; E=6e-59 COG: BH2708; COG0661 Predicted unusual protein kinase; E=3e-70; ABC transporter 2446432 1791181 RB4770 Rhodopirellula baltica SH 1 ABC transporter NP_866301.1 2444720 R 243090 CDS NP_866302.1 32473308 1790038 complement(2446507..2446638) 1 NC_005027.1 hypothetical protein 2446638 1790038 RB4771 Rhodopirellula baltica SH 1 hypothetical protein NP_866302.1 2446507 R 243090 CDS NP_866303.1 32473309 1797028 2446610..2446741 1 NC_005027.1 hypothetical protein 2446741 1797028 RB4772 Rhodopirellula baltica SH 1 hypothetical protein NP_866303.1 2446610 D 243090 CDS NP_866304.1 32473310 1792710 2446723..2447349 1 NC_005027.1 hypothetical protein 2447349 1792710 RB4773 Rhodopirellula baltica SH 1 hypothetical protein NP_866304.1 2446723 D 243090 CDS NP_866305.1 32473311 1792748 2447336..2448637 1 NC_005027.1 PMID: 2546860 best DB hits: BLAST: pir:JS0237; hypothetical 48K protein - Pseudomonas cepacia -----; E=2e-33 embl:CAA65720.1; (X96995) transposase IS1354 [Methylobacterium; E=7e-13 swissprot:P35880; TRA1_LACHE TRANSPOSASE FOR INSERTION SEQUENCE; E=1e-11 COG: Rv3431c; COG3328 Predicted transposase; E=4e-12 PFAM: PF00872; Transposase, Mutator family; E=1.5e-05; hypothetical protein 2448637 1792748 RB4775 Rhodopirellula baltica SH 1 hypothetical protein NP_866305.1 2447336 D 243090 CDS NP_866306.1 32473312 1793396 2448693..2449148 1 NC_005027.1 hypothetical protein 2449148 1793396 RB4777 Rhodopirellula baltica SH 1 hypothetical protein NP_866306.1 2448693 D 243090 CDS NP_866307.1 32473313 1791430 2449078..2449599 1 NC_005027.1 hypothetical protein 2449599 1791430 RB4778 Rhodopirellula baltica SH 1 hypothetical protein NP_866307.1 2449078 D 243090 CDS NP_866308.1 32473314 1792166 2449655..2450125 1 NC_005027.1 PMID: 99231861 best DB hits: BLAST: swissprot:P18501; HESB_ANASP HESB PROTEIN ----- pir: S11901; E=9e-08 swissprot:P46051; HEB1_ANAVA HESB PROTEIN, HETEROCYST -----; E=1e-07 gb:AAF82645.1; AF167538_12 (AF167538) HesB [Trichodesmium sp.; E=2e-07 COG: NMB1381; COG0316 Uncharacterized ACR; E=5e-07 PFAM: PF01521; HesB-like domain; E=4.9e-21; protein hesB 2450125 1792166 RB4781 Rhodopirellula baltica SH 1 protein hesB NP_866308.1 2449655 D 243090 CDS NP_866309.1 32473315 1790787 complement(2450091..2450273) 1 NC_005027.1 hypothetical protein 2450273 1790787 RB4783 Rhodopirellula baltica SH 1 hypothetical protein NP_866309.1 2450091 R 243090 CDS NP_866310.1 32473316 1794739 2450369..2452069 1 NC_005027.1 PMID: 7910580 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=4e-27 swissprot:P50428; ARSA_MOUSE ARYLSULFATASE A PRECURSOR (ASA); E=4e-22 pdb:1E2S; P Chain P, Crystal Structure Of An Arylsulfatase A; E=6e-22 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=2e-21 PFAM: PF00884; Sulfatase; E=8.8e-25; arylsulfatase 2452069 aslA 1794739 aslA Rhodopirellula baltica SH 1 arylsulfatase NP_866310.1 2450369 D 243090 CDS NP_866311.1 32473317 1795040 2452111..2453523 1 NC_005027.1 PMID: 10699374 best DB hits: BLAST: gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=2e-33 ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=1e-32 pdb:1E2S; P Chain P, Crystal Structure Of An Arylsulfatase A; E=4e-31 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=1e-28 PFAM: PF00884; Sulfatase; E=8.8e-45; N-acetylgalactosamine-6-sulfatase 2453523 1795040 RB4787 Rhodopirellula baltica SH 1 N-acetylgalactosamine-6-sulfatase NP_866311.1 2452111 D 243090 CDS NP_866312.1 32473318 1796634 2453596..2454099 1 NC_005027.1 best DB hits: BLAST: pir:T03939; potassium channel protein - maize ----- embl:; E=0.001 gb:AAF44358.1; AF198100_5 (AF198100) ORF FPV014 Ankyrin repeat; E=0.002 gb:AAF49551.1; (AE003529) CG5841 gene product [Drosophila; E=0.002 COG: TP0502; COG0666 Ankyrin repeat proteins; E=0.003 PFAM: PF00023; Ank repeat; E=8e-07; ankyrin repeat-containing protein 2454099 1796634 RB4788 Rhodopirellula baltica SH 1 ankyrin repeat-containing protein NP_866312.1 2453596 D 243090 CDS NP_866313.1 32473319 1795396 2454092..2454349 1 NC_005027.1 hypothetical protein 2454349 1795396 RB4790 Rhodopirellula baltica SH 1 hypothetical protein NP_866313.1 2454092 D 243090 CDS NP_866314.1 32473320 1794280 2454360..2454998 1 NC_005027.1 PMID: 90239044 best DB hits: BLAST: swissprot:O53719; CLPB_MYCTU CLPB PROTEIN ----- pir: C70834; E=0.009 gb:AAD00218.1; (U73653) clpB [Mycobacterium bovis]; E=0.009 swissprot:P53532; CLPB_CORGL CLPB PROTEIN ----- gb: AAB49540.1; E=0.010 COG: Rv0384c; COG0542 ATPases with chaperone activity, ATP-binding domain; E=9e-04 PFAM: PF00225; Kinesin motor domain; E=0.54; hypothetical protein 2454998 1794280 RB4792 Rhodopirellula baltica SH 1 hypothetical protein NP_866314.1 2454360 D 243090 CDS NP_866315.1 32473321 1796598 complement(2454990..2455157) 1 NC_005027.1 hypothetical protein 2455157 1796598 RB4793 Rhodopirellula baltica SH 1 hypothetical protein NP_866315.1 2454990 R 243090 CDS NP_866316.1 32473322 1796149 complement(2455190..2455552) 1 NC_005027.1 signal peptide 2455552 1796149 RB4794 Rhodopirellula baltica SH 1 signal peptide NP_866316.1 2455190 R 243090 CDS NP_866317.1 32473323 1792534 complement(2455572..2455874) 1 NC_005027.1 hypothetical protein 2455874 1792534 RB4796 Rhodopirellula baltica SH 1 hypothetical protein NP_866317.1 2455572 R 243090 CDS NP_866318.1 32473324 1791378 complement(2455910..2456020) 1 NC_005027.1 hypothetical protein 2456020 1791378 RB4797 Rhodopirellula baltica SH 1 hypothetical protein NP_866318.1 2455910 R 243090 CDS NP_866319.1 32473325 1793990 complement(2456217..2457056) 1 NC_005027.1 hypothetical protein 2457056 1793990 RB4798 Rhodopirellula baltica SH 1 hypothetical protein NP_866319.1 2456217 R 243090 CDS NP_866320.1 32473326 1796262 2457202..2458914 1 NC_005027.1 best DB hits: BLAST: pir:C70893; hypothetical protein Rv1069c - Mycobacterium; E=3e-88; hypothetical protein 2458914 1796262 RB4799 Rhodopirellula baltica SH 1 hypothetical protein NP_866320.1 2457202 D 243090 CDS NP_866321.1 32473327 1795131 2458911..2459243 1 NC_005027.1 hypothetical protein 2459243 1795131 RB4800 Rhodopirellula baltica SH 1 hypothetical protein NP_866321.1 2458911 D 243090 CDS NP_866322.1 32473328 1795756 complement(2459212..2459502) 1 NC_005027.1 hypothetical protein 2459502 1795756 RB4801 Rhodopirellula baltica SH 1 hypothetical protein NP_866322.1 2459212 R 243090 CDS NP_866323.1 32473329 1792575 2459514..2459687 1 NC_005027.1 hypothetical protein 2459687 1792575 RB4802 Rhodopirellula baltica SH 1 hypothetical protein NP_866323.1 2459514 D 243090 CDS NP_866324.1 32473330 1792886 2459672..2463133 1 NC_005027.1 signal peptide 2463133 1792886 RB4803 Rhodopirellula baltica SH 1 signal peptide NP_866324.1 2459672 D 243090 CDS NP_866325.1 32473331 1790401 complement(2460683..2461441) 1 NC_005027.1 hypothetical protein 2461441 1790401 RB4804 Rhodopirellula baltica SH 1 hypothetical protein NP_866325.1 2460683 R 243090 CDS NP_866326.1 32473332 1790013 2463134..2464603 1 NC_005027.1 hypothetical protein 2464603 1790013 RB4805 Rhodopirellula baltica SH 1 hypothetical protein NP_866326.1 2463134 D 243090 CDS NP_866327.1 32473333 1797046 2464638..2464883 1 NC_005027.1 hypothetical protein 2464883 1797046 RB4807 Rhodopirellula baltica SH 1 hypothetical protein NP_866327.1 2464638 D 243090 CDS NP_866328.1 32473334 1796228 2464977..2465273 1 NC_005027.1 signal peptide 2465273 1796228 RB4809 Rhodopirellula baltica SH 1 signal peptide NP_866328.1 2464977 D 243090 CDS NP_866329.1 32473335 1790122 complement(2465418..2465774) 1 NC_005027.1 hypothetical protein 2465774 1790122 RB4810 Rhodopirellula baltica SH 1 hypothetical protein NP_866329.1 2465418 R 243090 CDS NP_866330.1 32473336 1795215 2465768..2467084 1 NC_005027.1 PMID: 10531208 best DB hits: BLAST: gb:AAD38020.1; AF148127_1 (AF148127) transposase [Porphyromonas; E=2e-13 ddbj:BAA83477.1; (AB009361) transposase [Porphyromonas; E=3e-13 ddbj:BAA92234.1; (AB031551) transposase [Bacillus subtilis]; E=4e-10 COG: BH0691; COG3385 Predicted transposase; E=4e-10 PFAM: PF01609; Transposase (IS4 family); E=6.2e-08; transposase 2467084 1795215 RB4811 Rhodopirellula baltica SH 1 transposase NP_866330.1 2465768 D 243090 CDS NP_866331.1 32473337 1795064 2467011..2467289 1 NC_005027.1 hypothetical protein 2467289 1795064 RB4812 Rhodopirellula baltica SH 1 hypothetical protein NP_866331.1 2467011 D 243090 CDS NP_866332.1 32473338 1789976 2467394..2467537 1 NC_005027.1 hypothetical protein 2467537 1789976 RB4813 Rhodopirellula baltica SH 1 hypothetical protein NP_866332.1 2467394 D 243090 CDS NP_866333.1 32473339 1796211 2467537..2467800 1 NC_005027.1 hypothetical protein 2467800 1796211 RB4814 Rhodopirellula baltica SH 1 hypothetical protein NP_866333.1 2467537 D 243090 CDS NP_866334.1 32473340 1796870 complement(2467814..2469289) 1 NC_005027.1 PMID: 2303452 best DB hits: BLAST: embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=1e-46 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=1e-46 pdb:1E2S; P Chain P, Crystal Structure Of An Arylsulfatase A; E=2e-45 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=9e-38 yejM; COG3083 Predicted hydrolase of alkaline phosphatase; E=6e-06 Rv3077; COG3119 Arylsulfatase A and related enzymes; E=1e-04 PFAM: PF00884; Sulfatase; E=3e-48; arylsulphatase A 2469289 1796870 RB4815 Rhodopirellula baltica SH 1 arylsulphatase A NP_866334.1 2467814 R 243090 CDS NP_866335.1 32473341 1794628 complement(2469311..2469535) 1 NC_005027.1 hypothetical protein 2469535 1794628 RB4818 Rhodopirellula baltica SH 1 hypothetical protein NP_866335.1 2469311 R 243090 CDS NP_866336.1 32473342 1793027 2469488..2469898 1 NC_005027.1 hypothetical protein 2469898 1793027 RB4819 Rhodopirellula baltica SH 1 hypothetical protein NP_866336.1 2469488 D 243090 CDS NP_866337.1 32473343 1790776 2470119..2470739 1 NC_005027.1 PMID: 12024217; hypothetical protein 2470739 1790776 RB4823 Rhodopirellula baltica SH 1 hypothetical protein NP_866337.1 2470119 D 243090 CDS NP_866338.1 32473344 1795115 2470807..2471103 1 NC_005027.1 hypothetical protein 2471103 1795115 RB4825 Rhodopirellula baltica SH 1 hypothetical protein NP_866338.1 2470807 D 243090 CDS NP_866339.1 32473345 1795520 2471205..2472599 1 NC_005027.1 best DB hits: BLAST: gb:AAG18661.1; (AE004971) Vng0021h [Halobacterium sp. NRC-1]; E=4e-23 gb:AAG18694.1; (AE004974) Vng0056h [Halobacterium sp. NRC-1]; E=4e-21 pir:T44318; transposase homolog [imported] - Vibrio cholerae -----; E=3e-16; hypothetical protein 2472599 1795520 RB4826 Rhodopirellula baltica SH 1 hypothetical protein NP_866339.1 2471205 D 243090 CDS NP_866340.1 32473346 1790933 complement(2472731..2476540) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAA22286.1; (D37918) Reverse transcriptase like protein; E=0.011 ddbj:BAA84894.1; (AB024946) orf59 [Escherichia coli]; E=0.011 swissprot:Q47688; YKFC_ECOLI HYPOTHETICAL 43.2 KDA PROTEIN IN; E=0.016 PFAM: PF00078; Reverse transcriptase (RNA-dependent; E=0.24; reverse transcriptase like protein 2476540 1790933 RB4827 Rhodopirellula baltica SH 1 reverse transcriptase like protein NP_866340.1 2472731 R 243090 CDS NP_866341.1 32473347 1790111 2476612..2476761 1 NC_005027.1 hypothetical protein 2476761 1790111 RB4828 Rhodopirellula baltica SH 1 hypothetical protein NP_866341.1 2476612 D 243090 CDS NP_866342.1 32473348 1795876 complement(2476780..2477475) 1 NC_005027.1 hypothetical protein 2477475 1795876 RB4830 Rhodopirellula baltica SH 1 hypothetical protein NP_866342.1 2476780 R 243090 CDS NP_866343.1 32473349 1790330 complement(2477634..2478272) 1 NC_005027.1 hypothetical protein 2478272 1790330 RB4831 Rhodopirellula baltica SH 1 hypothetical protein NP_866343.1 2477634 R 243090 CDS NP_866344.1 32473350 1792453 2478225..2478443 1 NC_005027.1 hypothetical protein 2478443 1792453 RB4832 Rhodopirellula baltica SH 1 hypothetical protein NP_866344.1 2478225 D 243090 CDS NP_866345.1 32473351 1794670 2478658..2479119 1 NC_005027.1 hypothetical protein 2479119 1794670 RB4833 Rhodopirellula baltica SH 1 hypothetical protein NP_866345.1 2478658 D 243090 CDS NP_866346.1 32473352 1796886 complement(2478856..2479062) 1 NC_005027.1 best DB hits: BLAST: gb:AAK02211.1; (AE006047) unknown [Pasteurella multocida]; E=0.62 swissprot:P44114; YB26_HAEIN HYPOTHETICAL PROTEIN HI1126 -----; E=0.64; hypothetical protein 2479062 1796886 RB4834 Rhodopirellula baltica SH 1 hypothetical protein NP_866346.1 2478856 R 243090 CDS NP_866347.1 32473353 1796728 complement(2479184..2480371) 1 NC_005027.1 PMID: 10382966 PMID: 2110920 best DB hits: BLAST: pir:E72574; probable membrane protein APE1877 - Aeropyrum pernix; E=1e-08 pir:G70414; conserved hypothetical protein aq_1327 - Aquifex; E=3e-07 gb:AAG18926.1; (AE004994) Vng0361c [Halobacterium sp. NRC-1]; E=2e-06 COG: APE1877; COG0705 Uncharacterized membrane protein (homolog of; E=1e-09 PFAM: PF01694; Rhomboid family; E=1e-07; hypothetical protein 2480371 1796728 RB4835 Rhodopirellula baltica SH 1 hypothetical protein NP_866347.1 2479184 R 243090 CDS NP_866348.1 32473354 1791644 2480519..2481142 1 NC_005027.1 hypothetical protein 2481142 1791644 RB4839 Rhodopirellula baltica SH 1 hypothetical protein NP_866348.1 2480519 D 243090 CDS NP_866349.1 32473355 1792607 2481716..2481868 1 NC_005027.1 hypothetical protein 2481868 1792607 RB4844 Rhodopirellula baltica SH 1 hypothetical protein NP_866349.1 2481716 D 243090 CDS NP_866350.1 32473356 1789896 2481899..2483977 1 NC_005027.1 PMID: 11932238; signal peptide 2483977 1789896 RB4846 Rhodopirellula baltica SH 1 signal peptide NP_866350.1 2481899 D 243090 CDS NP_866351.1 32473357 1793858 2484018..2484470 1 NC_005027.1 signal peptide 2484470 1793858 RB4850 Rhodopirellula baltica SH 1 signal peptide NP_866351.1 2484018 D 243090 CDS NP_866352.1 32473358 1797037 complement(2484507..2485979) 1 NC_005027.1 PMID: 8020961 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=9e-41 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=1e-40 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=5e-35 COG: aslA; COG3119 Arylsulfatase A and related enzymes; E=3e-28 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=0.002 PFAM: PF00884; Sulfatase; E=1.9e-40; N-acetylgalactosamine 6-sulfatase (GALNS) 2485979 1797037 RB4851 Rhodopirellula baltica SH 1 N-acetylgalactosamine 6-sulfatase (GALNS) NP_866352.1 2484507 R 243090 CDS NP_866353.1 32473359 1790381 complement(2486043..2487347) 1 NC_005027.1 signal peptide 2487347 1790381 RB4854 Rhodopirellula baltica SH 1 signal peptide NP_866353.1 2486043 R 243090 CDS NP_866354.1 32473360 1791036 complement(2487453..2490002) 1 NC_005027.1 signal peptide 2490002 1791036 RB4856 Rhodopirellula baltica SH 1 signal peptide NP_866354.1 2487453 R 243090 CDS NP_866355.1 32473361 1791189 complement(2490087..2491427) 1 NC_005027.1 hypothetical protein 2491427 1791189 RB4858 Rhodopirellula baltica SH 1 hypothetical protein NP_866355.1 2490087 R 243090 CDS NP_866356.1 32473362 1796485 complement(2491429..2491989) 1 NC_005027.1 ECF subfamily RNA polymerase sigma factor 2491989 1796485 RB4859 Rhodopirellula baltica SH 1 ECF subfamily RNA polymerase sigma factor NP_866356.1 2491429 R 243090 CDS NP_866357.1 32473363 1795997 complement(2492119..2493468) 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: swissprot:Q37893; VG12_BPB03 PRE-NECK APPENDAGE PROTEIN (LATE; E=0.69; pre-neck appendage protein 2493468 1795997 RB4862 Rhodopirellula baltica SH 1 pre-neck appendage protein NP_866357.1 2492119 R 243090 CDS NP_866358.1 32473364 1795270 complement(2493642..2495009) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:B82062; conserved hypothetical protein VC2554 [imported] -; E=5e-25 gb:AAF12633.1; AE001826_102 (AE001826) hypothetical protein; E=3e-22 pir:A83139; hypothetical protein PA4065 [imported] - Pseudomonas; E=5e-21 COG: VC2554; COG0577 Predicted permease; E=4e-26 PFAM: PF02687; Predicted permease; E=1.3e-16; hypothetical protein 2495009 1795270 RB4864 Rhodopirellula baltica SH 1 hypothetical protein NP_866358.1 2493642 R 243090 CDS NP_866359.1 32473365 1796151 complement(2495006..2495722) 1 NC_005027.1 PMID: 10783239 best DB hits: BLAST: swissprot:P75957; LOLD_ECOLI LIPOPROTEIN RELEASING SYSTEM; E=6e-38 ddbj:BAA35937.1; (D90747) Heterocyst maturation protein (devA); E=6e-38 swissprot:O53899; Y986_MYCTU HYPOTHETICAL ABC TRANSPORTER; E=4e-37 COG: Rv0986; COG1136 ABC-type (unclassified) transport system, ATPase; E=4e-38 PA5503; COG1135 Uncharacterized ABC-type transport system ATPase; E=6e-33 PA4594; COG1136 ABC-type (unclassified) transport system, ATPase; E=8e-33 PFAM: PF00005; ABC transporter; E=9.9e-55; lipoprotein releasing system ATP-binding protein lolD 2495722 1796151 RB4866 Rhodopirellula baltica SH 1 lipoprotein releasing system ATP-binding protein lolD NP_866359.1 2495006 R 243090 CDS NP_866360.1 32473366 1795118 complement(2495722..2496354) 1 NC_005027.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 2496354 smpB 1795118 smpB Rhodopirellula baltica SH 1 SsrA-binding protein NP_866360.1 2495722 R 243090 CDS NP_866361.1 32473367 1796907 2496444..2497394 1 NC_005027.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 2497394 1796907 RB4868 Rhodopirellula baltica SH 1 lipoyl synthase NP_866361.1 2496444 D 243090 CDS NP_866362.1 32473368 1796526 complement(2497539..2499143) 1 NC_005027.1 PMID: 1356969 best DB hits: BLAST: gb:AAK03155.1; (AE006148) unknown [Pasteurella multocida]; E=6e-39 pir:F65170; hypothetical 58.9K protein (ibpb 3'region) - Escherichia; E=9e-37 gb:AAG58887.1; AE005600_5 (AE005600) transport protein; E=1e-36 COG: yidE; COG2985 Predicted permease; E=8e-38 aq_303; COG1226 Kef-type K+ transport systems, predicted NAD-binding; E=0.003 DR1411; COG0471 Di- and tricarboxylate transporters; E=0.008 PFAM: PF02080; Potassium channel; E=0.067; permease 2499143 1796526 RB4869 Rhodopirellula baltica SH 1 permease NP_866362.1 2497539 R 243090 CDS NP_866363.1 32473369 1790193 complement(2499282..2502527) 1 NC_005027.1 PMID: 10988064 best DB hits: BLAST: gb:AAG10499.1; AF279106_61 (AF279106) predicted cation efflux system; E=5e-95 pir:A83186; probable RND efflux transporter PA3676 [imported] -; E=2e-75 pir:F82829; acriflavin resistance protein XF0243 [imported] - Xylella; E=1e-71 COG: PA3676; COG0841 Cation/multidrug efflux pump; E=2e-76 PFAM: PF00873; AcrB/AcrD/AcrF family; E=6.1e-05; AcrB/AcrD/AcrF family cation efflux system 2502527 1790193 RB4870 Rhodopirellula baltica SH 1 AcrB/AcrD/AcrF family cation efflux system NP_866363.1 2499282 R 243090 CDS NP_866364.1 32473370 1790329 complement(2502476..2503966) 1 NC_005027.1 PMID: 11206551 best DB hits: BLAST: gb:AAG58620.1; AE005573_3 (AE005573) membrane protein; E=9e-11 swissprot:P37626; YHII_ECOLI HYPOTHETICAL 38.8 KD PROTEIN IN; E=1e-10 pir:G83220; hypothetical protein PA3402 [imported] - Pseudomonas; E=1e-09 COG: yhiI; COG0845 Membrane-fusion protein; E=9e-12 PA2836; COG1566 Multidrug resistance efflux pump; E=2e-04 XF2084; COG0845 Membrane-fusion protein; E=3e-04 PFAM: PF00364; Biotin-requiring enzyme; E=0.14 PF01173; Uncharacterized protein family; E=0.095 PF00529; HlyD family secretion protein; E=2.7e-07; hypothetical protein 2503966 1790329 RB4872 Rhodopirellula baltica SH 1 hypothetical protein NP_866364.1 2502476 R 243090 CDS NP_866365.1 32473371 1792336 complement(2503963..2504829) 1 NC_005027.1 PMID: 10049252 best DB hits: BLAST: gb:AAC27752.1; (AF072887) regulator AmrR [Burkholderia; E=2e-04 pir:H83274; probable transcriptional regulator PA2957 [imported] -; E=5e-04 swissprot:Q59431; UIDR_ECOLI UID OPERON REPRESSOR (GUS OPERON; E=0.002 COG: PA2957; COG1309 Transcriptional regulator; E=5e-05 PFAM: PF00440; Bacterial regulatory proteins, tetR; E=1.1e-10; regulator amrR 2504829 1792336 RB4873 Rhodopirellula baltica SH 1 regulator amrR NP_866365.1 2503963 R 243090 CDS NP_866366.1 32473372 1796576 2504970..2506157 1 NC_005027.1 hypothetical protein 2506157 1796576 RB4875 Rhodopirellula baltica SH 1 hypothetical protein NP_866366.1 2504970 D 243090 CDS NP_866367.1 32473373 1794750 complement(2505021..2506214) 1 NC_005027.1 PMID: 10937442 best DB hits: BLAST: embl:CAA05166.1; (AJ002065) delta-9 desaturase [Spirulina; E=1e-56 gb:AAD00699.1; (U90417) delta 9 acyl-lipid fatty acid desaturase; E=2e-53 gb:AAB61353.1; (U36390) delta-9 desaturase [Synechococcus sp. PCC; E=4e-53 COG: sll0541; COG1398 Fatty-acid desaturase; E=2e-50 PFAM: PF01069; Fatty acid desaturase; E=1.8e-66; delta-9 desaturase 2506214 1794750 RB4876 Rhodopirellula baltica SH 1 delta-9 desaturase NP_866367.1 2505021 R 243090 CDS NP_866368.1 32473374 1794117 2506310..2507494 1 NC_005027.1 PMID: 1761227 best DB hits: BLAST: swissprot:Q9ZJ12; SYK3_SALTY LYSYL-TRNA SYNTHETASE; E=1e-57 swissprot:P03812; SYK3_ECOLI LYSYL-TRNA SYNTHETASE; E=2e-57 pir:S56383; lysine--tRNA ligase (EC 6.1.1.6) genX - Escherichia coli; E=2e-57 COG: yjeA; COG2269 Truncated, possibly inactive Class II lysyl-tRNA; E=2e-58 DR0372; COG1190 Lysyl-tRNA synthetase class II; E=2e-29 PFAM: PF00152; tRNA synthetases class II (D, K a; E=8.7e-07; lysine--tRNA ligase genX 2507494 1794117 RB4877 Rhodopirellula baltica SH 1 lysine--tRNA ligase genX NP_866368.1 2506310 D 243090 CDS NP_866369.1 32473375 1791383 2507504..2509108 1 NC_005027.1 PMID: 3822816 PMID: 1390682 best DB hits: BLAST: pir:T05028; nodulin-26-like protein F13C5.80 - Arabidopsis thaliana; E=2e-47 pir:S01444; nodulin-26 precursor - soybean; E=4e-47 swissprot:P08995; NO26_SOYBN NODULIN-26 (N-26) ----- embl:; E=5e-47 COG: PA4034; COG0580 Glycerol uptake facilitator and related permeases; E=2e-25 PFAM: PF00230; Major intrinsic protein; E=6.6e-52; nodulin-26 2509108 1791383 RB4879 Rhodopirellula baltica SH 1 nodulin-26 NP_866369.1 2507504 D 243090 CDS NP_866370.1 32473376 1795752 2509233..2510837 1 NC_005027.1 PMID: 10809675 best DB hits: BLAST: gb:AAF72520.1; AF248951_1 (AF248951) mucin-desulfating sulfatase; E=4e-65 gb:AAK03766.1; (AE006204) unknown [Pasteurella multocida]; E=8e-34 gb:AAG58881.1; AE005599_13 (AE005599) sulfatase; E=9e-33 COG: yidJ; COG3119 Arylsulfatase A and related enzymes; E=2e-33 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=6e-10 VNG1337C; COG3119 Arylsulfatase A and related enzymes; E=7e-08 PFAM: PF00884; Sulfatase; E=2.4e-75; mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase) 2510837 1795752 RB4880 Rhodopirellula baltica SH 1 mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase) NP_866370.1 2509233 D 243090 CDS NP_866371.1 32473377 1796469 2511051..2512226 1 NC_005027.1 PMID: 11214968 best DB hits: BLAST: embl:CAB61226.1; (Y17305) hypothetical protein [Bacillus; E=0.092; hypothetical protein 2512226 1796469 RB4881 Rhodopirellula baltica SH 1 hypothetical protein NP_866371.1 2511051 D 243090 CDS NP_866372.1 32473378 1790709 2512219..2512428 1 NC_005027.1 hypothetical protein 2512428 1790709 RB4883 Rhodopirellula baltica SH 1 hypothetical protein NP_866372.1 2512219 D 243090 CDS NP_866373.1 32473379 1794909 complement(2512531..2512977) 1 NC_005027.1 signal peptide 2512977 1794909 RB4884 Rhodopirellula baltica SH 1 signal peptide NP_866373.1 2512531 R 243090 CDS NP_866374.1 32473380 1795939 complement(2513010..2513213) 1 NC_005027.1 hypothetical protein 2513213 1795939 RB4886 Rhodopirellula baltica SH 1 hypothetical protein NP_866374.1 2513010 R 243090 CDS NP_866375.1 32473381 1796991 2513247..2514149 1 NC_005027.1 PMID: 7916647 PMID: 7788523 best DB hits: BLAST: gb:AAA67647.1; (M87049) o181 [Escherichia coli]; E=1e-22 swissprot:P27863; HEMG_ECOLI PROTOPORPHYRINOGEN OXIDASE (PPO); E=2e-22 pir:S30741; hypothetical protein o181 - Escherichia coli; E=4e-22 COG: hemG; COG0716 Flavodoxins; E=2e-23 PFAM: PF00258; Flavodoxin; E=0.00015; protoporphyrinogen oxidase 2514149 hemG 1796991 hemG Rhodopirellula baltica SH 1 protoporphyrinogen oxidase NP_866375.1 2513247 D 243090 CDS NP_866376.1 32473382 1790286 2514257..2514418 1 NC_005027.1 hypothetical protein 2514418 1790286 RB4890 Rhodopirellula baltica SH 1 hypothetical protein NP_866376.1 2514257 D 243090 CDS NP_866377.1 32473383 1791867 complement(2514545..2516491) 1 NC_005027.1 PMID: 8188606 PMID: 8188605 best DB hits: BLAST: gb:AAK04193.1; AE006248_1 (AE006248) cadmium efflux ATPase; E=6e-74 pir:T36946; probable cation-transporting ATPase - Streptomyces; E=3e-73 ddbj:BAB07755.1; (AP001520) cadmium-transporting ATPase [Bacillus; E=4e-62 COG: BH4036; COG2217 Cation transport ATPases; E=4e-63 PFAM: PF00122; E1-E2 ATPase; E=9.5e-42 PF00702; haloacid dehalogenase-like hydro; E=2.3e-15; cadmium-transporting ATPase 2516491 1791867 RB4891 Rhodopirellula baltica SH 1 cadmium-transporting ATPase NP_866377.1 2514545 R 243090 CDS NP_866378.1 32473384 1796646 complement(2516410..2516640) 1 NC_005027.1 hypothetical protein 2516640 1796646 RB4892 Rhodopirellula baltica SH 1 hypothetical protein NP_866378.1 2516410 R 243090 CDS NP_866379.1 32473385 1791442 complement(2516801..2518939) 1 NC_005027.1 PMID: 8905231 PMID: 92082464 PMID: 93356744 best DB hits: BLAST: pir:S77094; glycogen operon protein (EC 3.2.1.-) glgX-2 -; E=1e-125 pir:S74546; glycogen operon protein (EC 3.2.1.-) glgX-1 -; E=1e-124 pir:S73088; glycogen operon protein glgX (EC 3.2.1.-) - Sulfolobus; E=1e-113 COG: slr1857; COG1523 Pullulanase and related glycosidases; E=1e-126 DR0464; COG0296 1,4-alpha-glucan branching enzyme; E=7e-17 DR0405; COG1523 Pullulanase and related glycosidases; E=8e-15 PFAM: PF02922; Isoamylase N-terminal domain; E=6.7e-23 PF00128; Alpha amylase, catalytic domai; E=3.3e-17; glycogen operon protein glgX-2 2518939 glgX 1791442 glgX Rhodopirellula baltica SH 1 glycogen operon protein glgX-2 NP_866379.1 2516801 R 243090 CDS NP_866380.1 32473386 1796470 complement(2518951..2519505) 1 NC_005027.1 hypothetical protein 2519505 1796470 RB4897 Rhodopirellula baltica SH 1 hypothetical protein NP_866380.1 2518951 R 243090 CDS NP_866381.1 32473387 1796161 complement(2519567..2520067) 1 NC_005027.1 hypothetical protein 2520067 1796161 RB4900 Rhodopirellula baltica SH 1 hypothetical protein NP_866381.1 2519567 R 243090 CDS NP_866382.1 32473388 1793497 complement(2520103..2520741) 1 NC_005027.1 hypothetical protein 2520741 1793497 RB4901 Rhodopirellula baltica SH 1 hypothetical protein NP_866382.1 2520103 R 243090 CDS NP_866383.1 32473389 1790431 complement(2520683..2520904) 1 NC_005027.1 hypothetical protein 2520904 1790431 RB4902 Rhodopirellula baltica SH 1 hypothetical protein NP_866383.1 2520683 R 243090 CDS NP_866384.1 32473390 1796839 2520925..2523306 1 NC_005027.1 best DB hits: BLAST: pir:S76896; hypothetical protein - Synechocystis sp. (strain PCC; E=0.0 gb:AAK05600.1; AE006381_1 (AE006381) phosphoketolase [Lactococcus; E=0.0 embl:CAB62746.1; (AL133424) hypothetical protein SCF56.01c; E=0.0 COG: slr0453; COG0021 Transketolase; E=0.0; phosphoketolase 2523306 1796839 RB4903 Rhodopirellula baltica SH 1 phosphoketolase NP_866384.1 2520925 D 243090 CDS NP_866385.1 32473391 1792840 2523288..2523899 1 NC_005027.1 best DB hits: BLAST: embl:CAC10115.1; (AL442165) mutase [Streptomyces; E=5e-37 embl:CAB61320.1; (AL132997) phosphatase [Streptomyces; E=2e-27 pir:G70595; probable entD protein - Mycobacterium tuberculosis; E=6e-21 COG: Rv3214; COG0406 Phosphoglycerate mutase/fructose-2,6-bisphosphatase; E=6e-22 TP0168; COG0588 Phosphoglycerate mutase 1; E=2e-05 aq_1990; COG0406 Phosphoglycerate mutase/fructose-2,6-bisphosphatase; E=6e-05 PFAM: PF00300; Phosphoglycerate mutase; E=6e-19; mutase 2523899 1792840 RB4904 Rhodopirellula baltica SH 1 mutase NP_866385.1 2523288 D 243090 CDS NP_866386.1 32473392 1792730 2524065..2525591 1 NC_005027.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta 2525591 atpD 1792730 atpD Rhodopirellula baltica SH 1 ATP synthase F0F1 subunit beta NP_866386.1 2524065 D 243090 CDS NP_866387.1 32473393 1790145 2525588..2525983 1 NC_005027.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; ATP synthase F0F1 subunit epsilon 2525983 atpC 1790145 atpC Rhodopirellula baltica SH 1 ATP synthase F0F1 subunit epsilon NP_866387.1 2525588 D 243090 CDS NP_866388.1 32473394 1795954 2525999..2526283 1 NC_005027.1 PMID: 9425287 best DB hits: BLAST: gb:AAC38051.1; (AF028006) ATP synthase gene 1 [Methanosarcina; E=2e-18; ATP synthase gene 1 2526283 1795954 RB4909 Rhodopirellula baltica SH 1 ATP synthase gene 1 NP_866388.1 2525999 D 243090 CDS NP_866389.1 32473395 1794618 2526270..2526617 1 NC_005027.1 PMID: 9425287 best DB hits: BLAST: gb:AAC38052.1; (AF028006) unknown [Methanosarcina barkeri]; E=0.49; hypothetical protein 2526617 1794618 RB4910 Rhodopirellula baltica SH 1 hypothetical protein NP_866389.1 2526270 D 243090 CDS NP_866390.1 32473396 1790465 2526614..2527300 1 NC_005027.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; ATP synthase F0F1 subunit A 2527300 atpB 1790465 atpB Rhodopirellula baltica SH 1 ATP synthase F0F1 subunit A NP_866390.1 2526614 D 243090 CDS NP_866391.2 229220795 1790160 2527382..2527648 1 NC_005027.1 produces ATP from ADP in the presence of a proton gradient across the membrane; subunit C is part of the membrane proton channel F0; ATP synthase F0F1 subunit C 2527648 1790160 RB4913 Rhodopirellula baltica SH 1 ATP synthase F0F1 subunit C NP_866391.2 2527382 D 243090 CDS NP_866392.1 32473398 1790769 2527665..2528405 1 NC_005027.1 PMID: 9425287 best DB hits: BLAST: gb:AAC38055.1; (AF028006) ATP synthase b subunit [Methanosarcina; E=2e-25 ddbj:BAA23684.1; (AB006151) proton-translocating ATPase, b; E=2e-05 swissprot:P21904; ATPF_PROMO ATP SYNTHASE B CHAIN, SODIUM ION; E=5e-04 COG: UU135; COG0711 F0F1-type ATP synthase b subunit; E=1e-04 PFAM: PF00430; ATP synthase B/B' CF(0); E=6.3e-12; ATP synthase subunit B 2528405 atpF 1790769 atpF Rhodopirellula baltica SH 1 ATP synthase subunit B NP_866392.1 2527665 D 243090 CDS NP_866393.2 161579033 1795580 2528481..2530013 1 NC_005027.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha 2530013 atpA 1795580 atpA Rhodopirellula baltica SH 1 ATP synthase F0F1 subunit alpha NP_866393.2 2528481 D 243090 CDS NP_866394.1 32473400 1793649 2530000..2530920 1 NC_005027.1 PMID: 9425287 best DB hits: BLAST: gb:AAC38058.1; (AF028006) ATP synthase gamma subunit C-terminus; E=7e-27 gb:AAC38057.1; (AF028006) ATP synthase gamma subunit N-terminus; E=1e-13 swissprot:P00837; ATPG_ECOLI ATP SYNTHASE GAMMA CHAIN -----; E=2e-13 COG: atpG; COG0224 F0F1-type ATP synthase gamma subunit; E=2e-14 PFAM: PF00231; ATP synthase; E=3.3e-07; ATP synthase subunit gamma 2530920 atpG 1793649 atpG Rhodopirellula baltica SH 1 ATP synthase subunit gamma NP_866394.1 2530000 D 243090 CDS NP_866395.1 32473401 1796658 complement(2530971..2531129) 1 NC_005027.1 hypothetical protein 2531129 1796658 RB4918 Rhodopirellula baltica SH 1 hypothetical protein NP_866395.1 2530971 R 243090 CDS NP_866396.1 32473402 1790804 2531133..2531654 1 NC_005027.1 signal peptide 2531654 1790804 RB4919 Rhodopirellula baltica SH 1 signal peptide NP_866396.1 2531133 D 243090 CDS NP_866397.1 32473403 1793630 complement(2531641..2531850) 1 NC_005027.1 hypothetical protein 2531850 1793630 RB4920 Rhodopirellula baltica SH 1 hypothetical protein NP_866397.1 2531641 R 243090 CDS NP_866398.1 32473404 1791665 2531934..2532635 1 NC_005027.1 PMID: 12004073; hypothetical protein 2532635 1791665 RB4921 Rhodopirellula baltica SH 1 hypothetical protein NP_866398.1 2531934 D 243090 CDS NP_866399.1 32473405 1791984 complement(2532667..2533638) 1 NC_005027.1 PMID: 7704254 best DB hits: BLAST: swissprot:P42243; YCBK_BACSU HYPOTHETICAL 34.0 KD PROTEIN IN; E=6e-13 pir:B75194; hypothetical protein PAB0040 - Pyrococcus abyssi (strain; E=1e-06 swissprot:O31540; YETK_BACSU HYPOTHETICAL 35.8 KD PROTEIN IN; E=2e-06 COG: BS_ycbK; COG0697 Predicted permeases; E=5e-14 PFAM: PF00892; Integral membrane protein DUF6; E=5.5e-10; permease 2533638 1791984 RB4923 Rhodopirellula baltica SH 1 permease NP_866399.1 2532667 R 243090 CDS NP_866400.1 32473406 1791144 complement(2533635..2533763) 1 NC_005027.1 hypothetical protein 2533763 1791144 RB4924 Rhodopirellula baltica SH 1 hypothetical protein NP_866400.1 2533635 R 243090 CDS NP_866401.1 32473407 1796424 complement(2533826..2534719) 1 NC_005027.1 PMID: 86039802 PMID: 97439408 best DB hits: BLAST: swissprot:Q9ZLH2; RNC_HELPJ RIBONUCLEASE III (RNASE III) -----; E=3e-26 pir:F64602; ribonuclease III - Helicobacter pylori (strain 26695); E=3e-26 swissprot:P56118; RNC_HELPY RIBONUCLEASE III (RNASE III); E=3e-26 COG: jhp0607; COG0571 dsRNA-specific ribonuclease; E=3e-27 PFAM: PF00636; RNase3 domain.; E=1.2e-26 PF00035; Double-stranded RNA binding mo; E=3.9e-21; ribonuclease III 2534719 1796424 RB4925 Rhodopirellula baltica SH 1 ribonuclease III NP_866401.1 2533826 R 243090 CDS NP_866402.1 32473408 1796689 2534735..2534941 1 NC_005027.1 hypothetical protein 2534941 1796689 RB4927 Rhodopirellula baltica SH 1 hypothetical protein NP_866402.1 2534735 D 243090 CDS NP_866403.1 32473409 1790210 2534999..2537350 1 NC_005027.1 PMID: 7934828 PMID: 1806041 PMID: 8665903 PMID: 2503378 best DB hits: BLAST: pir:G82759; hypothetical protein XF0820 [imported] - Xylella; E=5e-18 ddbj:BAA31158.1; (AB015725) aminopeptidase [Aeromonas caviae]; E=5e-11 ddbj:BAB07580.1; (AP001520) aminopeptidase [Bacillus halodurans]; E=1e-10 COG: XF0820; COG2234 Predicted aminopeptidases; E=5e-19 PFAM: PF02225; PA domain; E=0.0063 PF00595; PDZ domain (Also known as DHR o; E=1.1e-07; aminopeptidase 2537350 1790210 RB4928 Rhodopirellula baltica SH 1 aminopeptidase NP_866403.1 2534999 D 243090 CDS NP_866404.1 32473410 1796581 2537481..2538134 1 NC_005027.1 PMID: 12093901; signal peptide 2538134 1796581 RB4931 Rhodopirellula baltica SH 1 signal peptide NP_866404.1 2537481 D 243090 CDS NP_866405.1 32473411 1793517 2538155..2538301 1 NC_005027.1 hypothetical protein 2538301 1793517 RB4933 Rhodopirellula baltica SH 1 hypothetical protein NP_866405.1 2538155 D 243090 CDS NP_866406.1 32473412 1796487 2538298..2539206 1 NC_005027.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2539206 lpxC 1796487 lpxC Rhodopirellula baltica SH 1 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase NP_866406.1 2538298 D 243090 CDS NP_866407.1 32473413 1791935 2539280..2540089 1 NC_005027.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 2540089 lpxA 1791935 lpxA Rhodopirellula baltica SH 1 UDP-N-acetylglucosamine acyltransferase NP_866407.1 2539280 D 243090 CDS NP_866408.1 32473414 1797080 2540086..2541195 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S76068; hypothetical protein - Synechocystis sp. (strain PCC; E=3e-23 pir:H69216; 3-chlorobenzoate-3,4-dioxygenase dyhydrogenase related; E=3e-22 pir:E75096; NADH-dependent dehydrogenase homolog. PAB0775 -; E=9e-16 COG: slr0338; COG0673 Predicted dehydrogenases and related proteins; E=3e-24 PFAM: PF02871; NAD/NADP octopine/nopaline deh; E=0.21 PF01113; Dihydrodipicolinate reductase; E=0.045 PF00547; Urease, gamma subunit; E=0.84; NADH-dependent dehydrogenase 2541195 1797080 RB4937 Rhodopirellula baltica SH 1 NADH-dependent dehydrogenase NP_866408.1 2540086 D 243090 CDS NP_866409.1 32473415 1796741 2541358..2541525 1 NC_005027.1 signal peptide 2541525 1796741 RB4938 Rhodopirellula baltica SH 1 signal peptide NP_866409.1 2541358 D 243090 CDS NP_866410.1 32473416 1791115 2541555..2542262 1 NC_005027.1 hypothetical protein 2542262 1791115 RB4940 Rhodopirellula baltica SH 1 hypothetical protein NP_866410.1 2541555 D 243090 CDS NP_866411.1 32473417 1796742 2541619..2542140 1 NC_005027.1 hypothetical protein 2542140 1796742 RB4941 Rhodopirellula baltica SH 1 hypothetical protein NP_866411.1 2541619 D 243090 CDS NP_866412.1 32473418 1791970 2542159..2544972 1 NC_005027.1 PMID: 9244286 best DB hits: BLAST: pir:F75415; phosphoenolpyruvate carboxylase - Deinococcus; E=2e-92 swissprot:O32483; CAPP_RHOPA PHOSPHOENOLPYRUVATE CARBOXYLASE; E=3e-92 swissprot:P28594; CAPP_ANASP PHOSPHOENOLPYRUVATE CARBOXYLASE; E=4e-89 COG: DR1283; COG2352 Phosphoenolpyruvate carboxylase; E=2e-93 PFAM: PF00311; Phosphoenolpyruvate carboxylase; E=1.2e-15; phosphoenolpyruvate carboxylase 2544972 ppc 1791970 ppc Rhodopirellula baltica SH 1 phosphoenolpyruvate carboxylase NP_866412.1 2542159 D 243090 CDS NP_866413.1 32473419 1792270 complement(2544949..2546421) 1 NC_005027.1 hypothetical protein 2546421 1792270 RB4945 Rhodopirellula baltica SH 1 hypothetical protein NP_866413.1 2544949 R 243090 CDS NP_866414.1 32473420 1792458 2546436..2547455 1 NC_005027.1 hypothetical protein 2547455 1792458 RB4949 Rhodopirellula baltica SH 1 hypothetical protein NP_866414.1 2546436 D 243090 CDS NP_866415.1 32473421 1793042 2547498..2547785 1 NC_005027.1 hypothetical protein 2547785 1793042 RB4951 Rhodopirellula baltica SH 1 hypothetical protein NP_866415.1 2547498 D 243090 CDS NP_866416.1 32473422 1796999 2547861..2548361 1 NC_005027.1 PMID: 9359865 PMID: 10632710 PMID: 9389475 best DB hits: BLAST: gb:AAB89512.1; (AE000983) conserved hypothetical protein; E=0.006 gb:AAC26855.1; (AF069951) 5'-adenylylsulfate reductase; E=0.069 swissprot:P80579; THIO_ALIAC THIOREDOXIN (TRX) ----- pdb: 1QUW; E=0.32 COG: AF1737; COG1331 Highly conserved protein containing a thioredoxin; E=6e-04; thioredoxin 2548361 1796999 RB4954 Rhodopirellula baltica SH 1 thioredoxin NP_866416.1 2547861 D 243090 CDS NP_866417.1 32473423 1796426 2548380..2548553 1 NC_005027.1 hypothetical protein 2548553 1796426 RB4957 Rhodopirellula baltica SH 1 hypothetical protein NP_866417.1 2548380 D 243090 CDS NP_866418.1 32473424 1796629 complement(2548531..2549283) 1 NC_005027.1 PMID: 9171404 best DB hits: BLAST: ddbj:BAA14001.1; (D89626) adenylate cyclase [Anabaena sp.]; E=0.018 pir:S75331; penicillin-binding protein 1B mrcB - Synechocystis sp.; E=0.10 ddbj:BAB11326.1; (AB016886) gene_id:MCA23.11~unknown protein; E=0.14 COG: slr1710; COG0744 Membrane carboxypeptidase (penicillin-binding; E=0.010 PFAM: PF02590; Uncharacterized ACR, COG1576; E=0.23 PF00498; FHA domain; E=1.6e-09; adenylate cyclase 2549283 1796629 RB4958 Rhodopirellula baltica SH 1 adenylate cyclase NP_866418.1 2548531 R 243090 CDS NP_866419.1 32473425 1796594 2549270..2550379 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB07003.1; (AP001518) BH3284~unknown conserved protein; E=2e-51 pir:D69999; conserved hypothetical protein ytqA - Bacillus subtilis; E=3e-48 gb:AAK06364.1; AE006455_10 (AE006455) HYPOTHETICAL PROTEIN; E=1e-46 COG: BH3284; COG1242 Uncharacterized FeS oxidoreductases; E=2e-52 MJ1136; COG1243 ELP3 component of the RNA polymerase II complex,; E=2e-07 BS_hemN; COG0635 Coproporphyrinogen III oxidase and related FeS; E=2e-05; hypothetical protein 2550379 1796594 RB4960 Rhodopirellula baltica SH 1 hypothetical protein NP_866419.1 2549270 D 243090 CDS NP_866420.1 32473426 1790669 complement(2550408..2551148) 1 NC_005027.1 hypothetical protein 2551148 1790669 RB4961 Rhodopirellula baltica SH 1 hypothetical protein NP_866420.1 2550408 R 243090 CDS NP_866421.1 32473427 1790014 2551241..2551417 1 NC_005027.1 hypothetical protein 2551417 1790014 RB4963 Rhodopirellula baltica SH 1 hypothetical protein NP_866421.1 2551241 D 243090 CDS NP_866422.1 32473428 1790936 2551466..2552083 1 NC_005027.1 signal peptide 2552083 1790936 RB4965 Rhodopirellula baltica SH 1 signal peptide NP_866422.1 2551466 D 243090 CDS NP_866423.1 32473429 1796427 complement(2552057..2552311) 1 NC_005027.1 hypothetical protein 2552311 1796427 RB4966 Rhodopirellula baltica SH 1 hypothetical protein NP_866423.1 2552057 R 243090 CDS NP_866424.1 32473430 1790342 complement(2552650..2553402) 1 NC_005027.1 PMID: 97000351 best DB hits: BLAST: embl:CAB90984.1; (AL355832) deoR-family transcriptional; E=3e-15 gb:AAD15248.1; (L37338) repressor [Streptomyces; E=3e-14 ddbj:BAB05608.1; (AP001513) BH1889~unknown conserved protein; E=3e-10 COG: BH1889; COG2378 Predicted transcriptional regulator; E=3e-11 PFAM: PF00455; Bacterial regulatory proteins, deoR; E=0.0029 PF01022; Bacterial regulatory protein, arsR f; E=0.12; DeoR family transcriptional regulator 2553402 1790342 RB4967 Rhodopirellula baltica SH 1 DeoR family transcriptional regulator NP_866424.1 2552650 R 243090 CDS NP_866425.1 32473431 1793783 2553479..2554474 1 NC_005027.1 PMID: 20435850 best DB hits: BLAST: pir:B70957; probable ephA protein - Mycobacterium tuberculosis; E=1e-57 gb:AAG14967.1; AF233335_1 (AF233335) soluble epoxide hydrolase; E=7e-44 gb:AAG23251.1; AF311103_2 (AF311103) cytosolic epoxide hydrolase; E=8e-44 COG: Rv3617; COG0596 Predicted hydrolases or acyltransferases (alpha/beta; E=1e-58 BS_yfhM; COG0596 Predicted hydrolases or acyltransferases; E=8e-27 DR2549; COG0596 Predicted hydrolases or acyltransferases (alpha/beta; E=2e-23 PFAM: PF00561; alpha/beta hydrolase fold; E=2.5e-23; hypothetical protein 2554474 ephA 1793783 ephA Rhodopirellula baltica SH 1 hypothetical protein NP_866425.1 2553479 D 243090 CDS NP_866426.1 32473432 1796697 2554443..2555447 1 NC_005027.1 best DB hits: PFAM: PF00189; Ribosomal protein S3, C-termin; E=0.66; hypothetical protein 2555447 1796697 RB4969 Rhodopirellula baltica SH 1 hypothetical protein NP_866426.1 2554443 D 243090 CDS NP_866427.1 32473433 1792516 complement(2555106..2557070) 1 NC_005027.1 PMID: 97000351 best DB hits: BLAST: embl:CAB71254.1; (AL138598) hypothetical protein SC1A2.16c.; E=3e-16 embl:CAB95448.1; (AL359782) hypothetical protein, CHR1.152; E=9e-08; hypothetical protein 2557070 1792516 RB4971 Rhodopirellula baltica SH 1 hypothetical protein NP_866427.1 2555106 R 243090 CDS NP_866428.1 32473434 1796369 2557220..2557390 1 NC_005027.1 hypothetical protein 2557390 1796369 RB4972 Rhodopirellula baltica SH 1 hypothetical protein NP_866428.1 2557220 D 243090 CDS NP_866429.1 32473435 1791700 complement(2557462..2557839) 1 NC_005027.1 hypothetical protein 2557839 1791700 RB4973 Rhodopirellula baltica SH 1 hypothetical protein NP_866429.1 2557462 R 243090 CDS NP_866430.1 32473436 1791817 complement(2557884..2558144) 1 NC_005027.1 hypothetical protein 2558144 1791817 RB4974 Rhodopirellula baltica SH 1 hypothetical protein NP_866430.1 2557884 R 243090 CDS NP_866431.1 32473437 1791259 2557936..2558115 1 NC_005027.1 hypothetical protein 2558115 1791259 RB4975 Rhodopirellula baltica SH 1 hypothetical protein NP_866431.1 2557936 D 243090 CDS NP_866432.1 32473438 1796090 2558245..2559300 1 NC_005027.1 hypothetical protein 2559300 1796090 RB4977 Rhodopirellula baltica SH 1 hypothetical protein NP_866432.1 2558245 D 243090 CDS NP_866433.1 32473439 1796879 complement(2559335..2559508) 1 NC_005027.1 hypothetical protein 2559508 1796879 RB4980 Rhodopirellula baltica SH 1 hypothetical protein NP_866433.1 2559335 R 243090 CDS NP_866434.1 32473440 1793889 2559627..2560415 1 NC_005027.1 PMID: 8759840 best DB hits: BLAST: pir:E70027; probable 3-oxoacyl-[acyl-carrier-protein] reductase (EC; E=3e-75 pir:H83476; probable short-chain dehydrogenase PA1344 [imported] -; E=2e-60 pir:H70046; probable 3-oxoacyl-[acyl-carrier-protein] reductase (EC; E=1e-53 COG: BS_yvaG; COG1028 Dehydrogenases with different specificities; E=3e-76 PA1344; COG1028 Dehydrogenases with different specificities (related; E=2e-61 BS_yvrD; COG1028 Dehydrogenases with different specificities; E=1e-54 PFAM: PF00106; short chain dehydrogenase; E=5.1e-48 PF00678; Short chain dehydrogenase/reduct; E=3.4e-06; 3-oxoacyl-ACP reductase 2560415 1793889 RB4981 Rhodopirellula baltica SH 1 3-oxoacyl-ACP reductase NP_866434.1 2559627 D 243090 CDS NP_866435.1 32473441 1790478 2560457..2561305 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB04024.1; (AP001508) BH0305~unknown conserved protein in; E=1e-29 gb:AAG59409.1; AE005653_10 (AE005653) oxidoreductase; E=1e-26 swissprot:P39315; YTFG_ECOLI HYPOTHETICAL 29.7 KD PROTEIN IN; E=3e-26 COG: BH0305; COG0702 Predicted nucleoside-diphosphate-sugar epimerases; E=1e-30 PFAM: PF01073; 3-beta hydroxysteroid dehydrogenase; E=0.1; oxidoreductase 2561305 1790478 RB4982 Rhodopirellula baltica SH 1 oxidoreductase NP_866435.1 2560457 D 243090 CDS NP_866436.1 32473442 1795624 2561302..2561424 1 NC_005027.1 hypothetical protein 2561424 1795624 RB4983 Rhodopirellula baltica SH 1 hypothetical protein NP_866436.1 2561302 D 243090 CDS NP_866437.1 32473443 1794201 complement(2561395..2562546) 1 NC_005027.1 PMID: 11016950 best DB hits: BLAST: pir:F82096; conserved hypothetical protein VC2282 [imported] -; E=7e-56 pir:T44958; hypothetical protein [imported] - Natronomonas pharaonis; E=6e-55 gb:AAG20249.1; (AE005100) succinate dehydrogenase subunit; Sdh; E=3e-21 COG: VC2282; COG2988 Succinylglutamate desuccinylase; E=7e-57; succinate dehydrogenase subunit 2562546 1794201 RB4984 Rhodopirellula baltica SH 1 succinate dehydrogenase subunit NP_866437.1 2561395 R 243090 CDS NP_866438.1 32473444 1790835 complement(2562613..2562822) 1 NC_005027.1 hypothetical protein 2562822 1790835 RB4985 Rhodopirellula baltica SH 1 hypothetical protein NP_866438.1 2562613 R 243090 CDS NP_866439.1 32473445 1794252 2563201..2563728 1 NC_005027.1 signal peptide 2563728 1794252 RB4987 Rhodopirellula baltica SH 1 signal peptide NP_866439.1 2563201 D 243090 CDS NP_866440.1 32473446 1790821 2563689..2563886 1 NC_005027.1 signal peptide 2563886 1790821 RB4988 Rhodopirellula baltica SH 1 signal peptide NP_866440.1 2563689 D 243090 CDS NP_866441.1 32473447 1791306 2563777..2565093 1 NC_005027.1 PMID: 9872454 best DB hits: BLAST: ddbj:BAB08360.1; (AB015475) Ta11-like non-LTR retroelement; E=0.40 PFAM: PF00114; Pilin (bacterial filament); E=0.014; Ta11-like non-LTR retroelement protein-like 2565093 1791306 RB4989 Rhodopirellula baltica SH 1 Ta11-like non-LTR retroelement protein-like NP_866441.1 2563777 D 243090 CDS NP_866442.1 32473448 1792987 2564029..2565093 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.014; signal peptide 2565093 1792987 RB4990 Rhodopirellula baltica SH 1 signal peptide NP_866442.1 2564029 D 243090 CDS NP_866443.1 32473449 1790975 2565084..2565503 1 NC_005027.1 signal peptide 2565503 1790975 RB4991 Rhodopirellula baltica SH 1 signal peptide NP_866443.1 2565084 D 243090 CDS NP_866444.1 32473450 1797082 2565522..2566862 1 NC_005027.1 signal peptide 2566862 1797082 RB4992 Rhodopirellula baltica SH 1 signal peptide NP_866444.1 2565522 D 243090 CDS NP_866445.1 32473451 1795887 complement(2566796..2567881) 1 NC_005027.1 PMID: 11679669; signal peptide 2567881 1795887 RB4993 Rhodopirellula baltica SH 1 signal peptide NP_866445.1 2566796 R 243090 CDS NP_866446.1 32473452 1791137 complement(2567983..2569284) 1 NC_005027.1 PMID: 8063417 best DB hits: BLAST: pir:C83500; probable two-component sensor PA1158 [imported] -; E=6e-33 gb:AAG56596.1; AE005384_6 (AE005384) sensor histidine protein; E=2e-27 swissprot:P18392; RSTB_ECOLI SENSOR PROTEIN RSTB ----- pir:; E=2e-27 COG: PA1158; COG0642 Sensory transduction histidine kinases; E=6e-34 PFAM: PF00672; HAMP domain; E=8.4e-08 PF00512; His Kinase A (phosphoacceptor) doma; E=1.1e-15 PF02518; Histidine kinase-, DNA gyrase B-, p; E=1.2e-31; osmolarity sensor protein envZ 2569284 1791137 RB4994 Rhodopirellula baltica SH 1 osmolarity sensor protein envZ NP_866446.1 2567983 R 243090 CDS NP_866447.1 32473453 1796961 complement(2569371..2569838) 1 NC_005027.1 PMID: 8969176 PMID: 11237620 best DB hits: BLAST: pir:H83140; 6,7-dimethyl-8-ribityllumazine synthase PA4053; E=8e-21 pir:C82741; 6,7-dimethyl-8-ribityllumazine synthase XF0954; E=2e-20 gb:AAK02815.1; (AE006110) RibH [Pasteurella multocida]; E=4e-19 COG: PA4053; COG0054 Riboflavin synthase beta-chain; E=7e-22 PFAM: PF00885; 6,7-dimethyl-8-ribityllumazine; E=1.3e-34; 6,7-dimethyl-8-ribityllumazine synthase 2569838 ribH 1796961 ribH Rhodopirellula baltica SH 1 6,7-dimethyl-8-ribityllumazine synthase NP_866447.1 2569371 R 243090 CDS NP_866448.1 32473454 1796957 complement(2569897..2571441) 1 NC_005027.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 2571441 rho 1796957 rho Rhodopirellula baltica SH 1 transcription termination factor Rho NP_866448.1 2569897 R 243090 CDS NP_866449.1 32473455 1796118 complement(2571627..2572250) 1 NC_005027.1 PMID: 8921872 PMID: 91092284 PMID: 89024568 best DB hits: BLAST: pir:T08409; DNA-3-methyladenine glycosidase I homolog F18B3.160 -; E=9e-20 gb:AAD39589.1; AC007858_3 (AC007858) This gene is a member of PF; E=2e-19 ddbj:BAB05468.1; (AP001513) DNA-3-methyladenine glycosidase; E=4e-19 COG: BH1749; COG0122 3-Methyladenine DNA glycosylase; E=4e-20; DNA-3-methyladenine glycosidase 2572250 alkA 1796118 alkA Rhodopirellula baltica SH 1 DNA-3-methyladenine glycosidase NP_866449.1 2571627 R 243090 CDS NP_866450.1 32473456 1790972 2572354..2572665 1 NC_005027.1 hypothetical protein 2572665 1790972 RB5001 Rhodopirellula baltica SH 1 hypothetical protein NP_866450.1 2572354 D 243090 CDS NP_866451.1 32473457 1796962 2572662..2574158 1 NC_005027.1 PMID: 8062823 PMID: 96214991 PMID: 8062822 best DB hits: BLAST: swissprot:P72935; YA17_SYNY3 AMMONIUM TRANSPORTER SLL1017; E=1e-70 gb:AAF15904.1; AF208160_1 (AF208160) high affinity ammonium; E=1e-56 swissprot:P54147; Y108_SYNY3 AMMONIUM TRANSPORTER SLL0108; E=1e-55 COG: sll1017; COG0004 Ammonia permeases; E=1e-71 PFAM: PF00909; Ammonium Transporter Family; E=7.6e-157; high affinity ammonium transporter 2574158 1796962 RB5003 Rhodopirellula baltica SH 1 high affinity ammonium transporter NP_866451.1 2572662 D 243090 CDS NP_866452.1 32473458 1796958 2574383..2574859 1 NC_005027.1 PMID: 1702507 best DB hits: BLAST: pir:A72380; nitrogen regulatory protein P-II - Thermotoga maritima; E=4e-21 swissprot:P21193; GLNB_AZOBR NITROGEN REGULATORY PROTEIN P-II; E=8e-17 embl:CAA63238.1; (X92496) PII-like protein Pz [Azospirillum; E=1e-16 COG: TM0403; COG0347 Nitrogen regulatory protein PII; E=4e-22 PFAM: PF00543; Nitrogen regulatory protein P-II; E=2.7e-27; nitrogen regulatory protein P-II 2574859 glnB 1796958 glnB Rhodopirellula baltica SH 1 nitrogen regulatory protein P-II NP_866452.1 2574383 D 243090 CDS NP_866453.1 32473459 1790739 2574916..2575812 1 NC_005027.1 PMID: 10473406 PMID: 9274014 best DB hits: BLAST: pir:T05414; protein kinase homolog F28A23.20 - Arabidopsis thaliana; E=9e-17 gb:AAG36766.1; AF180369_1 (AF180369) acetyl xylan esterase AxeA; E=3e-14 pir:T47558; hypothetical protein F8J2.180 - Arabidopsis thaliana; E=5e-13; acetyl xylan esterase AxeA 2575812 axeA 1790739 axeA Rhodopirellula baltica SH 1 acetyl xylan esterase AxeA NP_866453.1 2574916 D 243090 CDS NP_866454.1 32473460 1790839 2575757..2576944 1 NC_005027.1 best DB hits: PFAM: PF00150; Cellulase (glycosyl hydrolase famil; E=0.26; signal peptide 2576944 1790839 RB5008 Rhodopirellula baltica SH 1 signal peptide NP_866454.1 2575757 D 243090 CDS NP_866455.1 32473461 1791764 complement(2576877..2577161) 1 NC_005027.1 50S ribosomal protein L28 2577161 1791764 RB5010 Rhodopirellula baltica SH 1 50S ribosomal protein L28 NP_866455.1 2576877 R 243090 CDS NP_866456.1 32473462 1795796 2577047..2578327 1 NC_005027.1 PMID: 9324248 best DB hits: BLAST: gb:AAD04192.1; (U63813) lichenase [Orpinomyces sp. PC-2]; E=0.16 pir:A36910; xylanase, beta(1,3-1,4)-glucanase - Ruminococcus; E=0.25 swissprot:Q53317; XYND_RUMFL XYLANASEBETA-GLUCANASE PRECURSOR; E=0.25; lichenase 2578327 1795796 RB5011 Rhodopirellula baltica SH 1 lichenase NP_866456.1 2577047 D 243090 CDS NP_866457.1 32473463 1790236 2578275..2578493 1 NC_005027.1 hypothetical protein 2578493 1790236 RB5012 Rhodopirellula baltica SH 1 hypothetical protein NP_866457.1 2578275 D 243090 CDS NP_866458.1 32473464 1793688 complement(2578474..2579178) 1 NC_005027.1 PMID: 2828880 best DB hits: BLAST: pir:B70351; ribosomal-protein-alanine acetyltransferase - Aquifex; E=1e-11 pir:G69233; N-terminal acetyltransferase complex, subunit ARD1 -; E=3e-10 pir:S56597; peptide N-acetyltransferase (EC 2.3.1.-) rimI -; E=2e-09 COG: aq_567; COG0456 Acetyltransferases; E=1e-12 Ta0455; COG0454 Histone acetyltransferase HPA2 and related; E=2e-05 VC0657; COG0456 Acetyltransferases; E=2e-05 PFAM: PF00583; Acetyltransferase (GNAT) family; E=6e-23; ribosomal-protein-alanine acetyltransferase 2579178 rimI 1793688 rimI Rhodopirellula baltica SH 1 ribosomal-protein-alanine acetyltransferase NP_866458.1 2578474 R 243090 CDS NP_866459.1 32473465 1794547 complement(2579226..2579933) 1 NC_005027.1 PMID: 9792656 PMID: 9791168 best DB hits: BLAST: gb:AAC69683.1; (AF019747) beta1,4-galactosyltransferase; E=0.76; beta-1,4-galactosyltransferase waaX 2579933 1794547 RB5016 Rhodopirellula baltica SH 1 beta-1,4-galactosyltransferase waaX NP_866459.1 2579226 R 243090 CDS NP_866460.1 32473466 1792289 complement(2579923..2581296) 1 NC_005027.1 best DB hits: PFAM: PF00535; Glycosyl transferase; E=0.00033; hypothetical protein 2581296 1792289 RB5019 Rhodopirellula baltica SH 1 hypothetical protein NP_866460.1 2579923 R 243090 CDS NP_866461.1 32473467 1791727 complement(2581306..2581773) 1 NC_005027.1 hypothetical protein 2581773 1791727 RB5022 Rhodopirellula baltica SH 1 hypothetical protein NP_866461.1 2581306 R 243090 CDS NP_866462.1 32473468 1792903 2581935..2583452 1 NC_005027.1 PMID: 11466286 best DB hits: BLAST: pir:T08153; cysteine proteinase (EC 3.4.22.-) - Volvox carteri f.; E=0.003 pir:H71456; probable pyrolysin (EC 3.4.-.-) homolog PH0310; E=0.021 pir:C75015; probable pyrolysin (EC 3.4.-.-) homolog PAB1252; E=0.024 PFAM: PF00112; Papain family cysteine protease; E=0.071; cysteine proteinase 2583452 1792903 RB5025 Rhodopirellula baltica SH 1 cysteine proteinase NP_866462.1 2581935 D 243090 CDS NP_866463.1 32473469 1791222 complement(2583453..2588894) 1 NC_005027.1 PMID: 8969512 best DB hits: BLAST: pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=6e-44 swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=1e-37 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=3e-37 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=6e-45 PFAM: PF00069; Protein kinase domain; E=1.5e-45 PF00004; ATPase associated with vari; E=0.14 PF00005; ABC transporter; E=0.082; serine/threonine-protein kinase pknB 2588894 1791222 RB5028 Rhodopirellula baltica SH 1 serine/threonine-protein kinase pknB NP_866463.1 2583453 R 243090 CDS NP_866464.1 32473470 1791576 complement(2589034..2589744) 1 NC_005027.1 best DB hits: BLAST: embl:CAC11769.1; (AL445064) conserved hypothetical protein; E=9e-08 pir:F70426; conserved hypothetical protein aq_1457 - Aquifex; E=4e-07 embl:CAB88946.1; (AL353863) methyltransferase; E=7e-07 COG: Ta0630; COG0500 SAM-dependent methyltransferases; E=9e-09 VC0083; COG2226 Methylase involved in ubiquinone/menaquinone; E=2e-05 aq_262; COG0500 SAM-dependent methyltransferases; E=1e-04; methyltransferase 2589744 1791576 RB5029 Rhodopirellula baltica SH 1 methyltransferase NP_866464.1 2589034 R 243090 CDS NP_866465.1 32473471 1790995 complement(2589750..2590541) 1 NC_005027.1 best DB hits: BLAST: pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=0.005; signal peptide 2590541 1790995 RB5031 Rhodopirellula baltica SH 1 signal peptide NP_866465.1 2589750 R 243090 CDS NP_866466.1 32473472 1790940 2590570..2590731 1 NC_005027.1 hypothetical protein 2590731 1790940 RB5034 Rhodopirellula baltica SH 1 hypothetical protein NP_866466.1 2590570 D 243090 CDS NP_866467.1 32473473 1793137 complement(2590674..2590973) 1 NC_005027.1 hypothetical protein 2590973 1793137 RB5035 Rhodopirellula baltica SH 1 hypothetical protein NP_866467.1 2590674 R 243090 CDS NP_866468.1 32473474 1796668 2590789..2590959 1 NC_005027.1 hypothetical protein 2590959 1796668 RB5036 Rhodopirellula baltica SH 1 hypothetical protein NP_866468.1 2590789 D 243090 CDS NP_866469.1 32473475 1792489 2590997..2591572 1 NC_005027.1 PMID: 9389475 best DB hits: BLAST: gb:AAB91035.1; (AE001092) monoamine oxidase regulatory protein,; E=0.026 embl:CAC23410.1; (AL512967) hypothetical monoamine oxidase; E=0.056 gb:AAB88943.1; (AE000944) maoC protein (maoC) [Archaeoglobus; E=0.095 COG: AF0198; COG2030 Monoamine oxidase; E=0.002 PFAM: PF01575; MaoC like domain; E=5.8e-07; monoamine oxidase regulatory protein 2591572 maoC 1792489 maoC Rhodopirellula baltica SH 1 monoamine oxidase regulatory protein NP_866469.1 2590997 D 243090 CDS NP_866470.1 32473476 1790981 complement(2591619..2593115) 1 NC_005027.1 PMID: 92177421 best DB hits: BLAST: pir:C75453; GMC oxidoreductase - Deinococcus radiodurans (strain R1); E=9e-35 swissprot:Q00593; ALKJ_PSEOL ALCOHOL DEHYDROGENASE [ACCEPTOR]; E=3e-28 embl:CAB51051.1; (AJ233397) alcohol dehydrogenase [Pseudomonas; E=3e-25 COG: DR0965; COG2303 Choline dehydrogenase and related flavoproteins; E=9e-36 PFAM: PF01494; FAD binding domain; E=0.085 PF00732; GMC oxidoreductases; E=2.3e-09 PF01583; Adenylylsulfate kinase; E=0.85; GMC oxidoreductase 2593115 betA 1790981 betA Rhodopirellula baltica SH 1 GMC oxidoreductase NP_866470.1 2591619 R 243090 CDS NP_866471.1 32473477 1791198 complement(2593112..2593915) 1 NC_005027.1 PMID: 9371463 best DB hits: BLAST: pir:D69036; conserved hypothetical protein MTH1267 -; E=2e-14 pir:B75083; probable hydroxyacylglutathione hydrolase (EC 3.1.2.6); E=5e-10 pir:F71229; hypothetical protein PH0096 - Pyrococcus horikoshii; E=6e-07 COG: MTH1267; COG0491 Zn-dependent hydrolases, including glyoxylases; E=1e-15 PFAM: PF00753; Metallo-beta-lactamase superfamil; E=1.5e-30; glyoxalase 2593915 1791198 RB5042 Rhodopirellula baltica SH 1 glyoxalase NP_866471.1 2593112 R 243090 CDS NP_866472.1 32473478 1791212 2593842..2595677 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S76683; hypothetical protein - Synechocystis sp. (strain PCC; E=7e-25 COG: slr0625; COG0786 Na+/glutamate symporter; E=7e-26; Na+/glutamate symporter 2595677 1791212 RB5043 Rhodopirellula baltica SH 1 Na+/glutamate symporter NP_866472.1 2593842 D 243090 CDS NP_866473.1 32473479 1791141 2595813..2597426 1 NC_005027.1 PMID: 9371463 best DB hits: BLAST: swissprot:O26742; PUR1_METTH AMIDOPHOSPHORIBOSYLTRANSFERASE; E=6e-54 gb:AAG19793.1; (AE005064) amidophosphoribosyl-pyrophosphate; E=2e-53 gb:AAB90366.1; (AE001044) amidophosphoribosyltransferase (purF); E=2e-52 COG: MTH646; COG0034 Glutamine phosphoribosylpyrophosphate; E=5e-55 purF; COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase; E=5e-37 TM1247; COG0034 Glutamine phosphoribosylpyrophosphate; E=2e-36 PFAM: PF00310; Glutamine amidotransferases c; E=1.8e-22 PF00156; Phosphoribosyl transferase do; E=3.2e-08; amidophosphoribosyltransferase 2597426 1791141 RB5050 Rhodopirellula baltica SH 1 amidophosphoribosyltransferase NP_866473.1 2595813 D 243090 CDS NP_866474.1 32473480 1790308 complement(2597495..2598625) 1 NC_005027.1 PMID: 10086841 best DB hits: BLAST: ddbj:BAB05342.1; (AP001512) BH1623~unknown conserved protein; E=9e-40 swissprot:P50736; YPDA_BACSU HYPOTHETICAL 36.3 KD PROTEIN IN; E=1e-38 pir:B75252; conserved hypothetical protein - Deinococcus radiodurans; E=5e-25 COG: BH1623; COG0492 Thioredoxin reductase/alkyl hydroperoxide reductase; E=9e-41 BH3677; COG2072 Predicted flavoprotein involved in K+ transport; E=2e-06 BS_yumC; COG0492 Thioredoxin reductase/alkyl hydroperoxide reductase; E=4e-05 PFAM: PF01494; FAD binding domain; E=0.0024 PF01266; D-amino acid oxidase; E=0.43 PF00070; Pyridine nucleotide-disulphide; E=3.5e-15; thioredoxin reductase 2598625 1790308 RB5051 Rhodopirellula baltica SH 1 thioredoxin reductase NP_866474.1 2597495 R 243090 CDS NP_866475.1 32473481 1790572 2598590..2598760 1 NC_005027.1 hypothetical protein 2598760 1790572 RB5052 Rhodopirellula baltica SH 1 hypothetical protein NP_866475.1 2598590 D 243090 CDS NP_866476.1 32473482 1793047 2598772..2599761 1 NC_005027.1 PMID: 8973323 best DB hits: BLAST: swissprot:P54724; YFIH_BACSU HYPOTHETICAL 34.8 KD PROTEIN IN GLVBC; E=2e-09 pir:T34928; hypothetical protein SC3F9.06 SC3F9.06 - Streptomyces; E=2e-09 ddbj:BAB04968.1; (AP001511) BH1249~unknown conserved protein; E=0.001 COG: BH2317; COG1082 Predicted endonucleases; E=0.006; hypothetical protein 2599761 1793047 RB5053 Rhodopirellula baltica SH 1 hypothetical protein NP_866476.1 2598772 D 243090 CDS NP_866477.1 32473483 1792372 2599786..2600100 1 NC_005027.1 hypothetical protein 2600100 1792372 RB5054 Rhodopirellula baltica SH 1 hypothetical protein NP_866477.1 2599786 D 243090 CDS NP_866478.1 32473484 1791484 complement(2600094..2601971) 1 NC_005027.1 PMID: 91035372 PMID: 88240299 best DB hits: BLAST: pir:B82536; ABC transporter ATP-binding protein XF2617 [imported] -; E=1e-130 swissprot:Q57242; UUP1_HAEIN ABC TRANSPORTER ATP-BINDING PROTEIN; E=1e-130 gb:AAK02961.1; (AE006126) Uup1 [Pasteurella multocida]; E=1e-129 COG: XF2617; COG0488 ATPase components of ABC transporters with; E=1e-131 uup; COG0488 ATPase components of ABC transporters with duplicated; E=1e-127 VC1486; COG0488 ATPase components of ABC transporters with; E=1e-126 PFAM: PF00006; ATP synthase alpha/beta famil; E=0.076 PF00005; ABC transporter; E=1.9e-51 PF01202; Shikimate kinase; E=0.76; ABC transporter ATP-binding protein 2601971 uup 1791484 uup Rhodopirellula baltica SH 1 ABC transporter ATP-binding protein NP_866478.1 2600094 R 243090 CDS NP_866479.1 32473485 1791376 complement(2601968..2603071) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:S77512; ABC-type transport protein slr1901 - Synechocystis sp.; E=3e-67 pir:F75377; ABC transporter ATP-binding protein - Deinococcus; E=6e-67 pir:G75548; ABC transporter ATP-binding protein - Deinococcus; E=1e-50 COG: slr1901; COG1131 ABC-type multidrug transport system, ATPase; E=3e-68 BH1054_2; COG0842 Permease component of an ABC-transporter; E=8e-31 PH0820; COG1131 ABC-type multidrug transport system, ATPase; E=1e-30 PFAM: PF00448; SRP54-type protein, GTPase do; E=0.012 PF02223; Thymidylate kinase; E=0.13 PF00005; ABC transporter; E=1.3e-44; ABC transporter ATP-binding protein 2603071 1791376 RB5056 Rhodopirellula baltica SH 1 ABC transporter ATP-binding protein NP_866479.1 2601968 R 243090 CDS NP_866480.1 32473486 1796025 complement(2603120..2604748) 1 NC_005027.1 PMID: 9384377 best DB hits: BLAST: pir:F69772; hypothetical protein ydbT - Bacillus subtilis -----; E=6e-14 ddbj:BAB05440.1; (AP001512) BH1721~unknown conserved protein; E=7e-13 embl:CAA76218.1; (Y16431) hypothetical protein [Staphylococcus; E=9e-09 COG: BS_ydbS; COG3402 Uncharacterized protein; E=4e-07; hypothetical protein 2604748 1796025 RB5057 Rhodopirellula baltica SH 1 hypothetical protein NP_866480.1 2603120 R 243090 CDS NP_866481.1 32473487 1790611 complement(2604745..2605338) 1 NC_005027.1 PMID: 9384377 best DB hits: BLAST: pir:E69772; hypothetical protein ydbS - Bacillus subtilis -----; E=7e-11 ddbj:BAB05439.1; (AP001512) BH1720~unknown conserved protein; E=6e-07 pir:T36081; probable integral membrane protein - Streptomyces; E=6e-06 COG: BS_ydbS; COG3402 Uncharacterized protein; E=7e-12; hypothetical protein 2605338 1790611 RB5060 Rhodopirellula baltica SH 1 hypothetical protein NP_866481.1 2604745 R 243090 CDS NP_866482.1 32473488 1791711 complement(2605376..2605561) 1 NC_005027.1 hypothetical protein 2605561 1791711 RB5061 Rhodopirellula baltica SH 1 hypothetical protein NP_866482.1 2605376 R 243090 CDS NP_866483.1 32473489 1793226 complement(2605551..2605784) 1 NC_005027.1 hypothetical protein 2605784 1793226 RB5062 Rhodopirellula baltica SH 1 hypothetical protein NP_866483.1 2605551 R 243090 CDS NP_866484.1 32473490 1790569 2605707..2607653 1 NC_005027.1 signal peptide 2607653 1790569 RB5064 Rhodopirellula baltica SH 1 signal peptide NP_866484.1 2605707 D 243090 CDS NP_866485.1 32473491 1792383 2607663..2609054 1 NC_005027.1 best DB hits: BLAST: gb:AAF53435.1; (AE003646) ck gene product [Drosophila melanogaster]; E=0.86; hypothetical protein 2609054 1792383 RB5066 Rhodopirellula baltica SH 1 hypothetical protein NP_866485.1 2607663 D 243090 CDS NP_866486.1 32473492 1791415 complement(2609147..2609287) 1 NC_005027.1 hypothetical protein 2609287 1791415 RB5067 Rhodopirellula baltica SH 1 hypothetical protein NP_866486.1 2609147 R 243090 CDS NP_866487.1 32473493 1791344 complement(2609272..2609433) 1 NC_005027.1 hypothetical protein 2609433 1791344 RB5068 Rhodopirellula baltica SH 1 hypothetical protein NP_866487.1 2609272 R 243090 CDS NP_866488.1 32473494 1794915 complement(2609378..2609575) 1 NC_005027.1 hypothetical protein 2609575 1794915 RB5069 Rhodopirellula baltica SH 1 hypothetical protein NP_866488.1 2609378 R 243090 CDS NP_866489.1 32473495 1793061 complement(2609627..2610535) 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.0048; hypothetical protein 2610535 1793061 RB5071 Rhodopirellula baltica SH 1 hypothetical protein NP_866489.1 2609627 R 243090 CDS NP_866490.1 32473496 1792197 2610521..2610739 1 NC_005027.1 hypothetical protein 2610739 1792197 RB5073 Rhodopirellula baltica SH 1 hypothetical protein NP_866490.1 2610521 D 243090 CDS NP_866491.1 32473497 1791227 complement(2610788..2612038) 1 NC_005027.1 signal peptide 2612038 1791227 RB5074 Rhodopirellula baltica SH 1 signal peptide NP_866491.1 2610788 R 243090 CDS NP_866492.1 32473498 1794874 complement(2612164..2612505) 1 NC_005027.1 hypothetical protein 2612505 1794874 RB5076 Rhodopirellula baltica SH 1 hypothetical protein NP_866492.1 2612164 R 243090 CDS NP_866493.1 32473499 1791343 complement(2612512..2613972) 1 NC_005027.1 hypothetical protein 2613972 1791343 RB5078 Rhodopirellula baltica SH 1 hypothetical protein NP_866493.1 2612512 R 243090 CDS NP_866494.1 32473500 1795965 complement(2613920..2614513) 1 NC_005027.1 PMID: 89024591 PMID: 94329558 best DB hits: BLAST: gb:AAD31513.1; AF143504_1 (AF143504) ECF-like sigma factor SigE; E=5e-07 gb:AAG01453.1; AF282857_1 (AF282857) HrpL [Pantoea stewartii; E=3e-06 gb:AAF76211.1; AF272053_1 (AF272053) HrpL [Erwinia herbicola pv.; E=5e-06 COG: Rv3223c; COG1595 DNA-directed RNA polymerase specialized sigma; E=6e-06 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=3.5e-05; ECF-like sigma factor SigE 2614513 1795965 RB5081 Rhodopirellula baltica SH 1 ECF-like sigma factor SigE NP_866494.1 2613920 R 243090 CDS NP_866495.1 32473501 1794896 complement(2614510..2615529) 1 NC_005027.1 signal peptide 2615529 1794896 RB5083 Rhodopirellula baltica SH 1 signal peptide NP_866495.1 2614510 R 243090 CDS NP_866496.1 32473502 1792634 complement(2615529..2617379) 1 NC_005027.1 PMID: 11997336 best DB hits: BLAST: gb:AAA65701.1; (U12424) mitochondrial glycerol-3-phosphate; E=0.004 pir:G02093; glycerol-3-phosphate dehydrogenase - human ----- gb:; E=0.004 gb:AAB50200.1; (U79250) glycerol-3-phosphate dehydrogenase [Homo; E=0.004 COG: AF0273; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; E=0.001 PFAM: PF01224; FAD-dependent glycerol-3-phospha; E=3e-05 PF01134; Glucose inhibited division prote; E=0.029 PF00070; Pyridine nucleotide-disulphide o; E=0.00038; hypothetical protein 2617379 1792634 RB5084 Rhodopirellula baltica SH 1 hypothetical protein NP_866496.1 2615529 R 243090 CDS NP_866497.1 32473503 1790565 2616273..2616728 1 NC_005027.1 signal peptide 2616728 1790565 RB5086 Rhodopirellula baltica SH 1 signal peptide NP_866497.1 2616273 D 243090 CDS NP_866498.1 32473504 1796258 complement(2617442..2617615) 1 NC_005027.1 hypothetical protein 2617615 1796258 RB5088 Rhodopirellula baltica SH 1 hypothetical protein NP_866498.1 2617442 R 243090 CDS NP_866499.1 32473505 1794487 2617584..2618774 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 2618774 1794487 RB5089 Rhodopirellula baltica SH 1 signal peptide NP_866499.1 2617584 D 243090 CDS NP_866500.1 32473506 1795805 2618771..2618950 1 NC_005027.1 signal peptide 2618950 1795805 RB5092 Rhodopirellula baltica SH 1 signal peptide NP_866500.1 2618771 D 243090 CDS NP_866501.1 32473507 1791949 2619010..2619213 1 NC_005027.1 hypothetical protein 2619213 1791949 RB5093 Rhodopirellula baltica SH 1 hypothetical protein NP_866501.1 2619010 D 243090 CDS NP_866502.1 32473508 1793319 complement(2619271..2619450) 1 NC_005027.1 hypothetical protein 2619450 1793319 RB5095 Rhodopirellula baltica SH 1 hypothetical protein NP_866502.1 2619271 R 243090 CDS NP_866503.1 32473509 1795648 2619419..2619643 1 NC_005027.1 hypothetical protein 2619643 1795648 RB5096 Rhodopirellula baltica SH 1 hypothetical protein NP_866503.1 2619419 D 243090 CDS NP_866504.1 32473510 1791506 complement(2619601..2620260) 1 NC_005027.1 PMID: 7559510 best DB hits: BLAST: ddbj:BAA90651.1; (AB003153) End3 [Paenibacillus polymyxa]; E=3e-28 pir:C71482; probable endonuclease III - Chlamydia trachomatis; E=3e-28 pir:B75537; endonuclease III - Deinococcus radiodurans (strain R1); E=7e-28 COG: CT697; COG0177 Predicted EndoIII-related endonuclease; E=3e-29 PFAM: PF00730; HhH-GPD superfamily base excision DN; E=1.6e-61; endonuclease III 2620260 1791506 RB5097 Rhodopirellula baltica SH 1 endonuclease III NP_866504.1 2619601 R 243090 CDS NP_866505.1 32473511 1794147 complement(2620293..2621267) 1 NC_005027.1 PMID: 7603442 best DB hits: BLAST: swissprot:Q59967; SRPH_SYNP7 SERINE ACETYLTRANSFERASE, PLASMID; E=7e-55 ddbj:BAA82868.1; (AB023954) serine acetyltransferase [Entamoeba; E=3e-35 ddbj:BAA82870.1; (AB023956) serine acetyltransferase 2 [Entamoeba; E=8e-34 COG: BH0110; COG1045 Serine acetyltransferase; E=3e-30 BS_ykuQ; COG2171 Tetrahydrodipicolinate N-succinyltransferase; E=2e-04 wcaB; COG1045 Serine acetyltransferase; E=0.002 PFAM: PF00132; Bacterial transferase hexapeptide (f; E=0.078; serine acetyltransferase, plasmid 2621267 1794147 RB5098 Rhodopirellula baltica SH 1 serine acetyltransferase, plasmid NP_866505.1 2620293 R 243090 CDS NP_866506.1 32473512 1794291 complement(2621375..2621890) 1 NC_005027.1 hypothetical protein 2621890 1794291 RB5100 Rhodopirellula baltica SH 1 hypothetical protein NP_866506.1 2621375 R 243090 CDS NP_866507.1 32473513 1791264 2621891..2622034 1 NC_005027.1 hypothetical protein 2622034 1791264 RB5101 Rhodopirellula baltica SH 1 hypothetical protein NP_866507.1 2621891 D 243090 CDS NP_866508.1 32473514 1791828 complement(2622000..2622248) 1 NC_005027.1 hypothetical protein 2622248 1791828 RB5102 Rhodopirellula baltica SH 1 hypothetical protein NP_866508.1 2622000 R 243090 CDS NP_866509.1 32473515 1794517 2622260..2623318 1 NC_005027.1 hypothetical protein 2623318 1794517 RB5103 Rhodopirellula baltica SH 1 hypothetical protein NP_866509.1 2622260 D 243090 CDS NP_866510.1 32473516 1791946 2623431..2623676 1 NC_005027.1 hypothetical protein 2623676 1791946 RB5107 Rhodopirellula baltica SH 1 hypothetical protein NP_866510.1 2623431 D 243090 CDS NP_866511.1 32473517 1793945 2623643..2623804 1 NC_005027.1 hypothetical protein 2623804 1793945 RB5108 Rhodopirellula baltica SH 1 hypothetical protein NP_866511.1 2623643 D 243090 CDS NP_866512.1 32473518 1792997 2623683..2623973 1 NC_005027.1 hypothetical protein 2623973 1792997 RB5109 Rhodopirellula baltica SH 1 hypothetical protein NP_866512.1 2623683 D 243090 CDS NP_866513.1 32473519 1792071 2623792..2623992 1 NC_005027.1 hypothetical protein 2623992 1792071 RB5110 Rhodopirellula baltica SH 1 hypothetical protein NP_866513.1 2623792 D 243090 CDS NP_866514.1 32473520 1792967 complement(2624056..2624691) 1 NC_005027.1 best DB hits: BLAST: pir:E82203; transcriptional regulator TetR family VC1408 [imported] -; E=1e-10 pir:F82161; transcriptional regulator TetR family VC1746 [imported] -; E=4e-10 pir:C83186; probable transcriptional regulator PA3678 [imported] -; E=9e-08 COG: VC1408; COG1309 Transcriptional regulator; E=1e-11 PFAM: PF00440; Bacterial regulatory proteins, tetR; E=2.4e-17; TetR family transcriptional regulator 2624691 1792967 RB5111 Rhodopirellula baltica SH 1 TetR family transcriptional regulator NP_866514.1 2624056 R 243090 CDS NP_866515.1 32473521 1792081 complement(2624936..2625052) 1 NC_005027.1 hypothetical protein 2625052 1792081 RB5114 Rhodopirellula baltica SH 1 hypothetical protein NP_866515.1 2624936 R 243090 CDS NP_866516.1 32473522 1790964 2625071..2626804 1 NC_005027.1 PMID: 8407802 best DB hits: BLAST: pir:F64826; probable membrane protein b0878 - Escherichia coli; E=4e-05 swissprot:P75830; YBJY_ECOLI HYPOTHETICAL 41.7 KDA PROTEIN IN; E=4e-05 gb:AAG55260.1; AE005269_4 (AE005269) membrane protein; E=7e-05 COG: ybjY; COG0845 Membrane-fusion protein; E=4e-06 VC1410; COG1566 Multidrug resistance efflux pump; E=0.008 PFAM: PF00364; Biotin-requiring enzyme; E=0.39; membrane-fusion protein 2626804 1790964 RB5116 Rhodopirellula baltica SH 1 membrane-fusion protein NP_866516.1 2625071 D 243090 CDS NP_866517.1 32473523 1792080 2626801..2630130 1 NC_005027.1 PMID: 8407802 best DB hits: BLAST: pir:F82829; acriflavin resistance protein XF0243 [imported] - Xylella; E=2e-88 pir:F82159; transporter, AcrBD/F family VC1757 [imported] - Vibrio; E=3e-86 pir:B83627; probable RND efflux transporter PA0158 [imported] -; E=6e-79 COG: XF0243; COG0841 Cation/multidrug efflux pump; E=2e-89 PFAM: PF00873; AcrB/AcrD/AcrF family; E=3e-15; cation/multidrug efflux pump 2630130 1792080 RB5117 Rhodopirellula baltica SH 1 cation/multidrug efflux pump NP_866517.1 2626801 D 243090 CDS NP_866518.1 32473524 1792370 complement(2630150..2630572) 1 NC_005027.1 hypothetical protein 2630572 1792370 RB5118 Rhodopirellula baltica SH 1 hypothetical protein NP_866518.1 2630150 R 243090 CDS NP_866519.1 32473525 1790946 complement(2630613..2633738) 1 NC_005027.1 signal peptide 2633738 1790946 RB5119 Rhodopirellula baltica SH 1 signal peptide NP_866519.1 2630613 R 243090 CDS NP_866520.1 32473526 1795279 2633691..2633858 1 NC_005027.1 hypothetical protein 2633858 1795279 RB5123 Rhodopirellula baltica SH 1 hypothetical protein NP_866520.1 2633691 D 243090 CDS NP_866521.1 32473527 1790002 2633842..2634558 1 NC_005027.1 hypothetical protein 2634558 1790002 RB5124 Rhodopirellula baltica SH 1 hypothetical protein NP_866521.1 2633842 D 243090 CDS NP_866522.1 32473528 1795262 complement(2634468..2636198) 1 NC_005027.1 best DB hits: BLAST: pir:G72242; flagellar P-ring protein - Thermotoga maritima (strain; E=9e-07 gb:AAG09321.1; (AF178757) CpcF [Nostoc sp. PCC 7120]; E=0.10 pir:T44927; hypothetical protein orf398 [imported] - Anabaena sp.; E=0.47 COG: TM1539; COG1706 Flagellar basal-body P-ring protein; E=9e-08; flagellar P-ring protein 2636198 flgI 1795262 flgI Rhodopirellula baltica SH 1 flagellar P-ring protein NP_866522.1 2634468 R 243090 CDS NP_866523.1 32473529 1795227 2636175..2637989 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:B83386; hypothetical protein PA2078 [imported] - Pseudomonas; E=7e-14 swissprot:P55493; Y4IJ_RHISN HYPOTHETICAL 65.5 KD PROTEIN Y4IJ; E=2e-13 swissprot:P55496; Y4IM_RHISN HYPOTHETICAL 47.1 KD PROTEIN Y4IM; E=1e-11 PFAM: PF00034; Cytochrome c; E=0.064; hypothetical protein 2637989 1795227 RB5128 Rhodopirellula baltica SH 1 hypothetical protein NP_866523.1 2636175 D 243090 CDS NP_866524.1 32473530 1790229 2638064..2639254 1 NC_005027.1 signal peptide 2639254 1790229 RB5133 Rhodopirellula baltica SH 1 signal peptide NP_866524.1 2638064 D 243090 CDS NP_866525.1 32473531 1796580 2639251..2639877 1 NC_005027.1 PMID: 8789257 best DB hits: BLAST: ddbj:BAB06786.1; (AP001517) BH3067~unknown conserved protein; E=4e-31 pir:S76403; hypothetical protein - Synechocystis sp. (strain PCC; E=7e-29 pir:C69986; conserved hypothetical protein ysnA - Bacillus subtilis; E=1e-27 COG: BH3067; COG0127 Xanthosine triphosphate pyrophosphatase; E=3e-32 PFAM: PF01725; Ham1 family; E=1.2e-72; xanthosine triphosphate pyrophosphatase 2639877 1796580 RB5134 Rhodopirellula baltica SH 1 xanthosine triphosphate pyrophosphatase NP_866525.1 2639251 D 243090 CDS NP_866526.1 32473532 1790040 complement(2639853..2640266) 1 NC_005027.1 best DB hits: BLAST: swissprot:Q9ZDY5; Y178_RICPR HYPOTHETICAL PROTEIN RP178 -----; E=2e-23 pir:E81913; hypothetical protein NMA0704 [imported] - Neisseria; E=3e-12 pir:G81189; 6-pyruvoyl tetrahydrobiopterin synthase, probable; E=7e-12 COG: RP178; COG0720 6-pyruvoyl-tetrahydropterin synthase; E=2e-24 PFAM: PF01242; 6-pyruvoyl tetrahydropterin synthase; E=1.2e-09; 6-pyruvoyl tetrahydrobiopterin synthase 2640266 1790040 RB5135 Rhodopirellula baltica SH 1 6-pyruvoyl tetrahydrobiopterin synthase NP_866526.1 2639853 R 243090 CDS NP_866527.1 32473533 1791916 complement(2640539..2640820) 1 NC_005027.1 hypothetical protein 2640820 1791916 RB5137 Rhodopirellula baltica SH 1 hypothetical protein NP_866527.1 2640539 R 243090 CDS NP_866528.1 32473534 1794505 complement(2640848..2641024) 1 NC_005027.1 hypothetical protein 2641024 1794505 RB5138 Rhodopirellula baltica SH 1 hypothetical protein NP_866528.1 2640848 R 243090 CDS NP_866529.1 32473535 1790088 2640970..2641920 1 NC_005027.1 hypothetical protein 2641920 1790088 RB5139 Rhodopirellula baltica SH 1 hypothetical protein NP_866529.1 2640970 D 243090 CDS NP_866530.1 32473536 1792992 2641937..2643778 1 NC_005027.1 PMID: 8472911 best DB hits: BLAST: embl:CAB02496.1; (Z80356) glucose-fructose oxidoreductase; E=2e-07 pdb:1OFG; A Chain A, Glucose-Fructose Oxidoreductase -----; E=2e-07 pdb:1EVJ; A Chain A, Crystal Structure Of Glucose-Fructose; E=2e-07 COG: BH1248; COG0673 Predicted dehydrogenases and related proteins; E=1e-05 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=3.2e-09; NADH-dependent dehydrogenase 2643778 1792992 RB5140 Rhodopirellula baltica SH 1 NADH-dependent dehydrogenase NP_866530.1 2641937 D 243090 CDS NP_866531.1 32473537 1790147 2643848..2645287 1 NC_005027.1 PMID: 10470850 best DB hits: BLAST: ddbj:BAB09588.1; (AB018118) gene_id:MRI1.6~pir D64592~similar to; E=8e-10 pir:S77300; hypothetical protein slr1403 - Synechocystis sp. (strain; E=0.018 PFAM: PF02012; BNR repeat; E=0.076; hypothetical protein 2645287 1790147 RB5143 Rhodopirellula baltica SH 1 hypothetical protein NP_866531.1 2643848 D 243090 CDS NP_866532.1 32473538 1794538 2645280..2645519 1 NC_005027.1 hypothetical protein 2645519 1794538 RB5145 Rhodopirellula baltica SH 1 hypothetical protein NP_866532.1 2645280 D 243090 CDS NP_866533.1 32473539 1793387 2645523..2647091 1 NC_005027.1 PMID: 7910580 best DB hits: BLAST: embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=6e-46 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=6e-46 swissprot:P50428; ARSA_MOUSE ARYLSULFATASE A PRECURSOR (ASA); E=2e-45 COG: aslA; COG3119 Arylsulfatase A and related enzymes; E=4e-22 PFAM: PF01069; Fatty acid desaturase; E=0.82 PF00884; Sulfatase; E=1.4e-38; arylsulphatase A 2647091 1793387 RB5146 Rhodopirellula baltica SH 1 arylsulphatase A NP_866533.1 2645523 D 243090 CDS NP_866534.1 32473540 1793347 complement(2647120..2649273) 1 NC_005027.1 hypothetical protein 2649273 1793347 RB5147 Rhodopirellula baltica SH 1 hypothetical protein NP_866534.1 2647120 R 243090 CDS NP_866535.1 32473541 1792474 complement(2649249..2650421) 1 NC_005027.1 hypothetical protein 2650421 1792474 RB5149 Rhodopirellula baltica SH 1 hypothetical protein NP_866535.1 2649249 R 243090 CDS NP_866536.1 32473542 1795091 2650462..2650605 1 NC_005027.1 hypothetical protein 2650605 1795091 RB5150 Rhodopirellula baltica SH 1 hypothetical protein NP_866536.1 2650462 D 243090 CDS NP_866537.1 32473543 1791707 complement(2650568..2651815) 1 NC_005027.1 catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic; threonine dehydratase 2651815 ilvA 1791707 ilvA Rhodopirellula baltica SH 1 threonine dehydratase NP_866537.1 2650568 R 243090 CDS NP_866538.1 32473544 1792596 complement(2651835..2652788) 1 NC_005027.1 PMID: 2229036 best DB hits: BLAST: swissprot:P33982; YHBG_AZOCA PROBABLE ABC TRANSPORTER ATP-BINDING; E=2e-66 gb:AAA80299.1; (U23471) ABC-type permease homolog [Rhizobium; E=1e-64 swissprot:P25885; YHBG_RHIME PROBABLE ABC TRANSPORTER ATP-BINDING; E=7e-63 COG: DR2134; COG1137 ABC-type (unclassified) transport system, ATPase; E=2e-61 PA1071; COG0411 High-affinity branched-chain amino acid transport; E=1e-37 MTH1370; COG1131 ABC-type multidrug transport system, ATPase; E=3e-35 PFAM: PF00005; ABC transporter; E=3.8e-59; ABC transporter ATP-binding protein 2652788 1792596 RB5152 Rhodopirellula baltica SH 1 ABC transporter ATP-binding protein NP_866538.1 2651835 R 243090 CDS NP_866539.1 32473545 1796980 complement(2652810..2654993) 1 NC_005027.1 PMID: 2202591 best DB hits: BLAST: pir:C82073; signal peptidase I VC2462 [imported] - Vibrio cholerae; E=3e-07 pir:H83550; signal peptidase I PA0768 [imported] - Pseudomonas; E=3e-06 swissprot:P23697; LEP_SALTY SIGNAL PEPTIDASE I (SPASE I) (LEADER; E=3e-06 COG: VC2462; COG0681 Signal peptidase I; E=3e-08 PFAM: PF00461; Signal peptidase I; E=0.00013; signal peptidase I 2654993 lepB 1796980 lepB Rhodopirellula baltica SH 1 signal peptidase I NP_866539.1 2652810 R 243090 CDS NP_866540.1 32473546 1794360 2655056..2656354 1 NC_005027.1 hypothetical protein 2656354 1794360 RB5161 Rhodopirellula baltica SH 1 hypothetical protein NP_866540.1 2655056 D 243090 CDS NP_866541.1 32473547 1792102 2656424..2657602 1 NC_005027.1 hypothetical protein 2657602 1792102 RB5162 Rhodopirellula baltica SH 1 hypothetical protein NP_866541.1 2656424 D 243090 CDS NP_866542.1 32473548 1793521 complement(2657709..2658365) 1 NC_005027.1 signal peptide 2658365 1793521 RB5164 Rhodopirellula baltica SH 1 signal peptide NP_866542.1 2657709 R 243090 CDS NP_866543.1 32473549 1791682 complement(2658366..2658500) 1 NC_005027.1 hypothetical protein 2658500 1791682 RB5167 Rhodopirellula baltica SH 1 hypothetical protein NP_866543.1 2658366 R 243090 CDS NP_866544.1 32473550 1797035 2658508..2658690 1 NC_005027.1 PMID: 10880436; hypothetical protein 2658690 1797035 RB5168 Rhodopirellula baltica SH 1 hypothetical protein NP_866544.1 2658508 D 243090 CDS NP_866545.1 32473551 1792048 2658816..2659373 1 NC_005027.1 PMID: 11823852 best DB hits: BLAST: swissprot:Q56740; LEP4_VIBVU TYPE 4 PREPILIN-LIKE PROTEINS LEADER; E=0.020 pir:S32915; type IV prepilin peptidase (EC 3.4.99.-) pilD -; E=0.059 pir:B82078; leader peptidase PilD VC2426 [imported] - Vibrio; E=0.065 COG: VC2426; COG1989 Signal peptidase, cleaves prepilin-like proteins; E=0.006 PFAM: PF01478; Type III leader peptidase famil; E=0.028; type IV prepilin peptidase CpaA 2659373 cpaA 1792048 cpaA Rhodopirellula baltica SH 1 type IV prepilin peptidase CpaA NP_866545.1 2658816 D 243090 CDS NP_866546.1 32473552 1790173 2659566..2660777 1 NC_005027.1 PMID: 10880436 best DB hits: BLAST: gb:AAF40191.1; AF229646_3 (AF229646) CpaB [Caulobacter crescentus]; E=0.003 pir:A70601; hypothetical protein Rv0990c - Mycobacterium; E=0.18; pilus assembly protein CpaB 2660777 cpaB 1790173 cpaB Rhodopirellula baltica SH 1 pilus assembly protein CpaB NP_866546.1 2659566 D 243090 CDS NP_866547.1 32473553 1796592 complement(2660799..2660933) 1 NC_005027.1 hypothetical protein 2660933 1796592 RB5173 Rhodopirellula baltica SH 1 hypothetical protein NP_866547.1 2660799 R 243090 CDS NP_866548.1 32473554 1793166 2660936..2662705 1 NC_005027.1 PMID: 10880436 best DB hits: BLAST: swissprot:P55702; Y4XJ_RHISN HYPOTHETICAL 44.3 KD PROTEIN Y4XJ; E=1e-40 gb:AAG60826.1; AF322012_131 (AF322013) RhcC2 [Bradyrhizobium; E=4e-36 gb:AAF40192.1; AF229646_4 (AF229646) CpaC [Caulobacter crescentus]; E=5e-32 COG: PA4304; COG1450 General secretory pathway protein D; E=1e-24 PFAM: PF00263; Bacterial type II and III secreti; E=3e-26; outer membrane channel for pilus assembly CpaC 2662705 cpaC 1793166 cpaC Rhodopirellula baltica SH 1 outer membrane channel for pilus assembly CpaC NP_866548.1 2660936 D 243090 CDS NP_866549.1 32473555 1793726 2662802..2664031 1 NC_005027.1 PMID: 10880436 best DB hits: BLAST: pir:F83108; hypothetical protein PA4303 [imported] - Pseudomonas; E=3e-11 gb:AAF40194.1; AF229646_6 (AF229646) CpaE [Caulobacter crescentus]; E=3e-06 swissprot:Q55900; MIND_SYNY3 SEPTUM SITE-DETERMINING PROTEIN MIND; E=3e-05 COG: sll0289; COG2894 Septum formation inhibitor-activating ATPase; E=2e-06 PH0612; COG0455 ATPases involved in chromosome partitioning; E=4e-05 BH3842_1; COG0784 CheY-like receiver domains; E=0.001 PFAM: PF00072; Response regulator receiver doma; E=0.0058; pilus assembly protein CpaE 2664031 cpaE 1793726 cpaE Rhodopirellula baltica SH 1 pilus assembly protein CpaE NP_866549.1 2662802 D 243090 CDS NP_866550.1 32473556 1795530 2664203..2665918 1 NC_005027.1 PMID: 8344936 best DB hits: BLAST: swissprot:Q9ZDG3; LNT_RICPR APOLIPOPROTEIN N-ACYLTRANSFERASE (ALP; E=7e-14 pir:A82261; apolipoprotein N-acyltransferase VC0958 [imported] -; E=2e-12 swissprot:P44626; LNT_HAEIN APOLIPOPROTEIN N-ACYLTRANSFERASE (ALP; E=1e-10 COG: RP366; COG0815 Apolipoprotein N-acyltransferase; E=6e-15; apolipoprotein N-acyltransferase 2665918 lnt 1795530 lnt Rhodopirellula baltica SH 1 apolipoprotein N-acyltransferase NP_866550.1 2664203 D 243090 CDS NP_866551.1 32473557 1793601 complement(2665962..2667482) 1 NC_005027.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 2667482 proS 1793601 proS Rhodopirellula baltica SH 1 prolyl-tRNA synthetase NP_866551.1 2665962 R 243090 CDS NP_866552.1 32473558 1793662 complement(2667464..2668633) 1 NC_005027.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 2668633 carA 1793662 carA Rhodopirellula baltica SH 1 carbamoyl phosphate synthase small subunit NP_866552.1 2667464 R 243090 CDS NP_866553.1 32473559 1789955 2668584..2668793 1 NC_005027.1 signal peptide 2668793 1789955 RB5180 Rhodopirellula baltica SH 1 signal peptide NP_866553.1 2668584 D 243090 CDS NP_866554.1 32473560 1793232 2668763..2668873 1 NC_005027.1 hypothetical protein 2668873 1793232 RB5181 Rhodopirellula baltica SH 1 hypothetical protein NP_866554.1 2668763 D 243090 CDS NP_866555.1 32473561 1790047 complement(2668888..2669247) 1 NC_005027.1 hypothetical protein 2669247 1790047 RB5182 Rhodopirellula baltica SH 1 hypothetical protein NP_866555.1 2668888 R 243090 CDS NP_866556.1 32473562 1790143 complement(2669274..2669903) 1 NC_005027.1 signal peptide 2669903 1790143 RB5184 Rhodopirellula baltica SH 1 signal peptide NP_866556.1 2669274 R 243090 CDS NP_866557.1 32473563 1794883 complement(2669970..2671136) 1 NC_005027.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 2671136 1794883 RB5186 Rhodopirellula baltica SH 1 GTP-dependent nucleic acid-binding protein EngD NP_866557.1 2669970 R 243090 CDS NP_866558.1 32473564 1789932 complement(2671205..2672944) 1 NC_005027.1 hypothetical protein 2672944 1789932 RB5189 Rhodopirellula baltica SH 1 hypothetical protein NP_866558.1 2671205 R 243090 CDS NP_866559.1 32473565 1795732 2672933..2674141 1 NC_005027.1 PMID: 8347586 best DB hits: BLAST: swissprot:Q9WZ44; QUEA_THEMA S-ADENOSYLMETHIONINE:TRNA; E=2e-68 gb:AAK05673.1; AE006388_4 (AE006388) S-adenosylmethionine tRNA; E=3e-68 swissprot:O32054; QUEA_BACSU S-ADENOSYLMETHIONINE:TRNA; E=2e-64 COG: TM0574; COG0809; E=2e-69 queA; COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase; E=7e-57 HI0245; COG0809; E=1e-54 PFAM: PF02547; Queuosine biosynthesis protei; E=5.5e-57; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 2674141 queA 1795732 queA Rhodopirellula baltica SH 1 S-adenosylmethionine:tRNA ribosyltransferase-isomerase NP_866559.1 2672933 D 243090 CDS NP_866560.1 32473566 1793092 2674328..2675845 1 NC_005027.1 PMID: 8020961 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=5e-32 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=2e-29 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=1e-28 COG: yidJ; COG3119 Arylsulfatase A and related enzymes; E=2e-24 PFAM: PF00884; Sulfatase; E=7.6e-66; N-acetylgalactosamine 6-sulfatase (GALNS) 2675845 1793092 RB5195 Rhodopirellula baltica SH 1 N-acetylgalactosamine 6-sulfatase (GALNS) NP_866560.1 2674328 D 243090 CDS NP_866561.1 32473567 1792515 complement(2675953..2678058) 1 NC_005027.1 PMID: 9882648 PMID: 10411273 best DB hits: BLAST: embl:CAA09772.1; (AJ011781) amylosucrase [Neisseria; E=1e-165 pir:C75457; alpha-amlyase - Deinococcus radiodurans (strain R1); E=1e-123 pir:E75322; probable trehalose synthase - Deinococcus radiodurans; E=4e-41 COG: DR0933; COG0366 Glycosidases; E=1e-124 PFAM: PF00128; Alpha amylase, catalytic domain; E=1.5e-26; alpha-amylase 2678058 1792515 RB5196 Rhodopirellula baltica SH 1 alpha-amylase NP_866561.1 2675953 R 243090 CDS NP_866562.1 32473568 1793982 complement(2677961..2680276) 1 NC_005027.1 PMID: 1840396 PMID: 10411273 best DB hits: BLAST: pir:S75935; hypothetical protein - Synechocystis sp. (strain PCC; E=1e-155 pir:T04062; sucrose-phosphate synthase homolog F28M11.40 - Arabidopsis; E=6e-91 pir:T04103; sucrose-phosphate synthase (EC 2.4.1.14) 1 - rice; E=1e-87 COG: sll0045_1; COG0438 Predicted glycosyltransferases; E=1e-111 sll0045_2; COG0561 Predicted hydrolases of the HAD superfamily; E=8e-40 PH1844; COG0438 Predicted glycosyltransferases; E=2e-11 PFAM: PF00534; Glycosyl transferases group 1; E=2.6e-18 PF00702; haloacid dehalogenase-like hy; E=0.67; sucrose-phosphate synthase 2680276 sps 1793982 sps Rhodopirellula baltica SH 1 sucrose-phosphate synthase NP_866562.1 2677961 R 243090 CDS NP_866563.1 32473569 1790750 complement(2680318..2681346) 1 NC_005027.1 PMID: 1809835 PMID: 10411273 best DB hits: BLAST: gb:AAG60871.1; AF322012_176 (AF322013) ID402 [Bradyrhizobium; E=5e-08 gb:AAK03933.1; (AE006222) unknown [Pasteurella multocida]; E=2e-06 pir:G75112; fructokinase (EC 2.7.1.4) PAB0482 - Pyrococcus abyssi; E=2e-05 COG: PAB0482; COG0524 Sugar kinases, ribokinase; E=2e-06 PFAM: PF00294; pfkB family carbohydrate kinase; E=2.5e-12; fructokinase 2681346 scrK 1790750 scrK Rhodopirellula baltica SH 1 fructokinase NP_866563.1 2680318 R 243090 CDS NP_866564.1 32473570 1792821 2681425..2684253 1 NC_005027.1 PMID: 1747104 best DB hits: BLAST: ddbj:BAA11010.1; (D64130) alpha-amylase [Sulfolobus solfataricus]; E=4e-93 pir:JC5135; alpha-amylase (EC 3.2.1.1) - Sulfolobus solfataricus; E=4e-93 pir:S73087; alpha-amylase (EC 3.2.1.1) precursor - Sulfolobus; E=1e-89 COG: Rv1562c; COG0296 1,4-alpha-glucan branching enzyme; E=6e-72 BS_amyX; COG1523 Pullulanase and related glycosidases; E=1e-14 YEL011w; COG0296 1,4-alpha-glucan branching enzyme; E=1e-12 PFAM: PF00128; Alpha amylase, catalytic domain; E=2.4e-17; alpha-amylase 2684253 1792821 RB5200 Rhodopirellula baltica SH 1 alpha-amylase NP_866564.1 2681425 D 243090 CDS NP_866565.1 32473571 1793267 2684362..2686242 1 NC_005027.1 PMID: 2186809 best DB hits: BLAST: ddbj:BAB04896.1; (AP001511) protein secretion (post-translocation; E=2e-08 pir:E71662; protein export protein prsa precursor (prsA) RP576 -; E=3e-05 pir:A83421; peptidyl-prolyl cis-trans isomerase D PA1805 [imported]; E=4e-05 COG: BH1177; COG0760 Parvulin-like peptidyl-prolyl isomerase; E=2e-09 PFAM: PF00639; PPIC-type PPIASE domain.; E=2.4e-08; peptidyl-prolyl cis-trans isomerase 2686242 1793267 RB5205 Rhodopirellula baltica SH 1 peptidyl-prolyl cis-trans isomerase NP_866565.1 2684362 D 243090 CDS NP_866566.1 32473572 1795906 complement(2686274..2686471) 1 NC_005027.1 hypothetical protein 2686471 1795906 RB5207 Rhodopirellula baltica SH 1 hypothetical protein NP_866566.1 2686274 R 243090 CDS NP_866567.1 32473573 1791745 complement(2686533..2687357) 1 NC_005027.1 PMID: 11030655 best DB hits: BLAST: embl:CAA98714.1; (Z74189) ORF YDL141w [Saccharomyces cerevisiae]; E=0.018 pir:H81716; biotin apo-protein ligase-related protein TC0305; E=0.020 pir:A72116; biotin apo-protein ligase-related protein CP0643; E=0.089; biotin apo-protein ligase-related protein 2687357 1791745 RB5208 Rhodopirellula baltica SH 1 biotin apo-protein ligase-related protein NP_866567.1 2686533 R 243090 CDS NP_866568.1 32473574 1792376 2687356..2687661 1 NC_005027.1 hypothetical protein 2687661 1792376 RB5209 Rhodopirellula baltica SH 1 hypothetical protein NP_866568.1 2687356 D 243090 CDS NP_866569.1 32473575 1796150 2687633..2688904 1 NC_005027.1 signal peptide 2688904 1796150 RB5210 Rhodopirellula baltica SH 1 signal peptide NP_866569.1 2687633 D 243090 CDS NP_866570.1 32473576 1790015 2688867..2689346 1 NC_005027.1 hypothetical protein 2689346 1790015 RB5211 Rhodopirellula baltica SH 1 hypothetical protein NP_866570.1 2688867 D 243090 CDS NP_866571.1 32473577 1791502 2689312..2689485 1 NC_005027.1 hypothetical protein 2689485 1791502 RB5212 Rhodopirellula baltica SH 1 hypothetical protein NP_866571.1 2689312 D 243090 CDS NP_866572.1 32473578 1791653 complement(2689508..2690194) 1 NC_005027.1 PMID: 11016950 best DB hits: BLAST: gb:AAG19976.1; (AE005079) Vng1746c [Halobacterium sp. NRC-1]; E=7e-08 embl:CAB61591.1; (AL133210) hypothetical protein SCG11A.10c; E=1e-04 swissprot:P54543; YQJF_BACSU HYPOTHETICAL 23.9 KD PROTEIN IN; E=0.002 COG: VNG1746C; COG3361 Uncharacterized ACR; E=7e-09; hypothetical protein 2690194 1791653 RB5213 Rhodopirellula baltica SH 1 hypothetical protein NP_866572.1 2689508 R 243090 CDS NP_866573.1 32473579 1794672 complement(2690277..2691764) 1 NC_005027.1 hypothetical protein 2691764 1794672 RB5214 Rhodopirellula baltica SH 1 hypothetical protein NP_866573.1 2690277 R 243090 CDS NP_866574.1 32473580 1794778 2691666..2692205 1 NC_005027.1 hypothetical protein 2692205 1794778 RB5217 Rhodopirellula baltica SH 1 hypothetical protein NP_866574.1 2691666 D 243090 CDS NP_866575.1 32473581 1792057 complement(2691774..2692151) 1 NC_005027.1 hypothetical protein 2692151 1792057 RB5220 Rhodopirellula baltica SH 1 hypothetical protein NP_866575.1 2691774 R 243090 CDS NP_866576.1 32473582 1795323 complement(2692135..2692467) 1 NC_005027.1 hypothetical protein 2692467 1795323 RB5221 Rhodopirellula baltica SH 1 hypothetical protein NP_866576.1 2692135 R 243090 CDS NP_866577.1 32473583 1790372 2692568..2693866 1 NC_005027.1 best DB hits: BLAST: pir:MMFFB2; laminin gamma-1 chain precursor - fruit fly (Drosophila; E=0.34 swissprot:P15215; LMG1_DROME LAMININ GAMMA-1 CHAIN PRECURSOR; E=0.34 prf:1410326A; laminin B2 [Drosophila sp.]; E=0.34; merozoite surface protein 3b 2693866 1790372 RB5223 Rhodopirellula baltica SH 1 merozoite surface protein 3b NP_866577.1 2692568 D 243090 CDS NP_866578.1 32473584 1794130 complement(2693979..2694245) 1 NC_005027.1 hypothetical protein 2694245 1794130 RB5225 Rhodopirellula baltica SH 1 hypothetical protein NP_866578.1 2693979 R 243090 CDS NP_866579.1 32473585 1791126 2694230..2694835 1 NC_005027.1 PMID: 3536912 best DB hits: BLAST: embl:CAC01344.1; (AL390975) DNA-3-methyladenine glycosylase I; E=1e-44 gb:AAG58698.1; AE005582_1 (AE005582) 3-methyladenine DNA; E=1e-42 swissprot:P05100; 3MG1_ECOLI DNA-3-METHYLADENINE GLYCOSYLASE I; E=2e-42 COG: tag; COG2818 3-Methyladenine DNA glycosylase; E=2e-43; DNA-3-methyladenine glycosylase I 2694835 tag 1791126 tag Rhodopirellula baltica SH 1 DNA-3-methyladenine glycosylase I NP_866579.1 2694230 D 243090 CDS NP_866580.1 32473586 1793274 complement(2694819..2695079) 1 NC_005027.1 hypothetical protein 2695079 1793274 RB5228 Rhodopirellula baltica SH 1 hypothetical protein NP_866580.1 2694819 R 243090 CDS NP_866581.1 32473587 1793444 2695138..2695872 1 NC_005027.1 signal peptide 2695872 1793444 RB5229 Rhodopirellula baltica SH 1 signal peptide NP_866581.1 2695138 D 243090 CDS NP_866582.1 32473588 1792053 2695884..2696963 1 NC_005027.1 signal peptide 2696963 1792053 RB5230 Rhodopirellula baltica SH 1 signal peptide NP_866582.1 2695884 D 243090 CDS NP_866583.1 32473589 1791681 complement(2696909..2697256) 1 NC_005027.1 best DB hits: BLAST: pir:JN0454; hypothetical 10.5K protein (URA1 5' region) - gill; E=2e-14 pir:D70531; hypothetical protein Rv2705c - Mycobacterium; E=2e-05 pir:A75544; conserved hypothetical protein - Deinococcus radiodurans; E=4e-05; hypothetical protein 2697256 1791681 RB5231 Rhodopirellula baltica SH 1 hypothetical protein NP_866583.1 2696909 R 243090 CDS NP_866584.1 32473590 1790991 complement(2697353..2697820) 1 NC_005027.1 signal peptide 2697820 1790991 RB5235 Rhodopirellula baltica SH 1 signal peptide NP_866584.1 2697353 R 243090 CDS NP_866585.1 32473591 1793656 2697775..2697996 1 NC_005027.1 hypothetical protein 2697996 1793656 RB5238 Rhodopirellula baltica SH 1 hypothetical protein NP_866585.1 2697775 D 243090 CDS NP_866586.1 32473592 1794545 2698074..2698631 1 NC_005027.1 best DB hits: PFAM: PF01617; Surface antigen; E=0.0013; signal peptide 2698631 1794545 RB5240 Rhodopirellula baltica SH 1 signal peptide NP_866586.1 2698074 D 243090 CDS NP_866587.1 32473593 1795350 2698715..2699374 1 NC_005027.1 best DB hits: PFAM: PF01434; Peptidase M41; E=0.034; hypothetical protein 2699374 1795350 RB5241 Rhodopirellula baltica SH 1 hypothetical protein NP_866587.1 2698715 D 243090 CDS NP_866588.1 32473594 1792334 2699382..2700380 1 NC_005027.1 PMID: 1909424 best DB hits: BLAST: swissprot:P26223; XYNB_BUTFI ENDO-1,4-BETA-XYLANASE B (XYLANASE B); E=1e-08 prf:1718306A; xylanase [Butyrivibrio fibrisolvens]; E=1e-08 gb:AAK04528.1; AE006280_4 (AE006280) sugar hydrolase [Lactococcus; E=4e-06; endo-1,4-beta-xylanase B 2700380 xynB 1792334 xynB Rhodopirellula baltica SH 1 endo-1,4-beta-xylanase B NP_866588.1 2699382 D 243090 CDS NP_866589.1 32473595 1793287 2700384..2701043 1 NC_005027.1 PMID: 7495855 best DB hits: BLAST: ddbj:BAB06584.1; (AP001516) hemolysin III [Bacillus halodurans]; E=1e-17 swissprot:P54176; HLY3_BACCE HEMOLYSIN III (HLY-III) -----; E=2e-16 swissprot:Q46827; YQFA_ECOLI HYPOTHETICAL 23.8 KD PROTEIN IN; E=2e-16 COG: BH2865; COG1272 Predicted membrane proteins, hemolysin III homologs; E=1e-18; hemolysin III 2701043 1793287 RB5245 Rhodopirellula baltica SH 1 hemolysin III NP_866589.1 2700384 D 243090 CDS NP_866590.1 32473596 1795411 complement(2700916..2701917) 1 NC_005027.1 signal peptide 2701917 1795411 RB5246 Rhodopirellula baltica SH 1 signal peptide NP_866590.1 2700916 R 243090 CDS NP_866591.1 32473597 1792619 complement(2702014..2704806) 1 NC_005027.1 best DB hits: BLAST: swissprot:Q00808; HET1_PODAN VEGETATIBLE INCOMPATIBILITY PROTEIN; E=2e-25 swissprot:P49695; PKWA_THECU SERINETHREONINE-PROTEIN; E=1e-21 embl:CAB45034.1; (AL078635) WD-repeat containing protein; E=1e-21 COG: sll0163; COG2319 WD40 repeat protein; E=4e-18 PFAM: PF00400; WD domain, G-beta repeat; E=3e-05; hypothetical protein 2704806 1792619 RB5247 Rhodopirellula baltica SH 1 hypothetical protein NP_866591.1 2702014 R 243090 CDS NP_866592.1 32473598 1791413 complement(2704803..2707307) 1 NC_005027.1 PMID: 7522196 best DB hits: BLAST: swissprot:P35824; SLAP_BACCI S-LAYER RELATED PROTEIN PRECURSOR; E=0.18 PFAM: PF02369; Bacterial Ig-like domain (group 1); E=0.1 PF02368; Bacterial Ig-like domain (group 2); E=0.013; S-layer related protein 2707307 1791413 RB5253 Rhodopirellula baltica SH 1 S-layer related protein NP_866592.1 2704803 R 243090 CDS NP_866593.1 32473599 1795201 complement(2707304..2708806) 1 NC_005027.1 hypothetical protein 2708806 1795201 RB5255 Rhodopirellula baltica SH 1 hypothetical protein NP_866593.1 2707304 R 243090 CDS NP_866594.1 32473600 1794624 2708872..2710458 1 NC_005027.1 PMID: 1955860 best DB hits: BLAST: pir:B72216; endoglucanase - Thermotoga maritima (strain MSB8); E=7e-85 swissprot:P25472; GUND_CLOCE ENDOGLUCANASE D PRECURSOR; E=3e-52 swissprot:P16218; GUNH_CLOTM ENDOGLUCANASE H PRECURSOR (EGH); E=5e-49 COG: TM1751; COG2730 Endoglucanase; E=6e-86 PFAM: PF00150; Cellulase (glycosyl hydrolase famil; E=5.3e-47; cellulase 2710458 1794624 RB5256 Rhodopirellula baltica SH 1 cellulase NP_866594.1 2708872 D 243090 CDS NP_866595.1 32473601 1793017 complement(2710474..2710641) 1 NC_005027.1 hypothetical protein 2710641 1793017 RB5258 Rhodopirellula baltica SH 1 hypothetical protein NP_866595.1 2710474 R 243090 CDS NP_866596.1 32473602 1791044 complement(2710634..2713378) 1 NC_005027.1 best DB hits: BLAST: pir:D83545; probable helicase PA0799 [imported] - Pseudomonas; E=8e-44 pir:C72027; swisnf family helicase_2 - Chlamydophila pneumoniae; E=6e-42 ddbj:BAA99057.1; (AP002548) SWISNF family helicase_2; E=1e-41 COG: PA0799; COG0553 Superfamily II DNA/RNA helicases, SNF2 family; E=7e-45 PFAM: PF00176; SNF2 and others N-terminal domain; E=2.4e-43 PF00271; Helicase conserved C-terminal doma; E=1.4e-23; SNF2 family helicase 2713378 1791044 RB5259 Rhodopirellula baltica SH 1 SNF2 family helicase NP_866596.1 2710634 R 243090 CDS NP_866597.1 32473603 1793299 complement(2713332..2713712) 1 NC_005027.1 hypothetical protein 2713712 1793299 RB5261 Rhodopirellula baltica SH 1 hypothetical protein NP_866597.1 2713332 R 243090 CDS NP_866598.1 32473604 1796225 2713742..2714029 1 NC_005027.1 hypothetical protein 2714029 1796225 RB5262 Rhodopirellula baltica SH 1 hypothetical protein NP_866598.1 2713742 D 243090 CDS NP_866599.1 32473605 1796730 2714052..2714999 1 NC_005027.1 best DB hits: BLAST: ref:XP_010773.1; hypothetical protein FLJ11151 [Homo sapiens]; E=2e-53 ddbj:BAA92034.1; (AK002013) unnamed protein product [Homo; E=7e-53 ddbj:BAB14194.1; (AK022710) unnamed protein product [Homo; E=2e-52; hypothetical protein 2714999 1796730 RB5263 Rhodopirellula baltica SH 1 hypothetical protein NP_866599.1 2714052 D 243090 CDS NP_866600.1 32473606 1792281 2715126..2715548 1 NC_005027.1 hypothetical protein 2715548 1792281 RB5264 Rhodopirellula baltica SH 1 hypothetical protein NP_866600.1 2715126 D 243090 CDS NP_866601.1 32473607 1793221 complement(2715584..2715721) 1 NC_005027.1 hypothetical protein 2715721 1793221 RB5266 Rhodopirellula baltica SH 1 hypothetical protein NP_866601.1 2715584 R 243090 CDS NP_866602.1 32473608 1792869 complement(2715679..2715819) 1 NC_005027.1 hypothetical protein 2715819 1792869 RB5267 Rhodopirellula baltica SH 1 hypothetical protein NP_866602.1 2715679 R 243090 CDS NP_866603.1 32473609 1792310 complement(2715827..2717386) 1 NC_005027.1 hypothetical protein 2717386 1792310 RB5268 Rhodopirellula baltica SH 1 hypothetical protein NP_866603.1 2715827 R 243090 CDS NP_866604.1 32473610 1795614 2717327..2717596 1 NC_005027.1 hypothetical protein 2717596 1795614 RB5271 Rhodopirellula baltica SH 1 hypothetical protein NP_866604.1 2717327 D 243090 CDS NP_866605.1 32473611 1794837 2717593..2718966 1 NC_005027.1 PMID: 9389475 best DB hits: BLAST: gb:AAB89850.1; (AE001008) conserved hypothetical protein; E=0.006 gb:AAG09249.1; AF176640_2 (AF176640) alcohol dehydrogenase; E=0.20 gb:AAD56237.2; AF184915_1 (AF184915) methanol dehydrogenase large; E=0.22 COG: AF1399; COG1520 Uncharacterized proteins of WD40-like repeat family; E=5e-04 PFAM: PF01011; PQQ enzyme repeat; E=0.022; hypothetical protein 2718966 1794837 RB5272 Rhodopirellula baltica SH 1 hypothetical protein NP_866605.1 2717593 D 243090 CDS NP_866606.1 32473612 1792550 complement(2719039..2719860) 1 NC_005027.1 PMID: 8451183 best DB hits: BLAST: pir:C83489; probable transcriptional regulator PA1261 [imported] -; E=1e-39 gb:AAF43900.1; (U20115) adpA-like protein [Mycobacterium; E=2e-10 pir:T43707; hypothetical protein [imported] - Streptomyces; E=2e-09 COG: PA1261; COG2207 AraC-type DNA-binding domain-containing proteins; E=1e-40 PFAM: PF00165; Bacterial regulatory helix-turn-heli; E=2.7e-22; transcriptional regulator 2719860 1792550 RB5275 Rhodopirellula baltica SH 1 transcriptional regulator NP_866606.1 2719039 R 243090 CDS NP_866607.1 32473613 1795592 2719913..2720884 1 NC_005027.1 PMID: 1463470 best DB hits: BLAST: pir:D81141; dihydrodipicolinate synthase NMB0929 [imported] -; E=3e-09 pir:H81878; probable dihydrodipicolinate synthase (EC 4.2.1.52); E=4e-09 ddbj:BAB05461.1; (AP001513) dihydrodipicolinate synthase; E=1e-07 COG: NMB0929; COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate; E=3e-10 PFAM: PF01137; RNA 3'-terminal phosphate cyclase; E=0.88 PF00701; Dihydrodipicolinate synthetase famil; E=0.00018; dihydrodipicolinate synthase 2720884 dapA 1795592 dapA Rhodopirellula baltica SH 1 dihydrodipicolinate synthase NP_866607.1 2719913 D 243090 CDS NP_866608.1 32473614 1795503 2720784..2722154 1 NC_005027.1 PMID: 7906689 best DB hits: BLAST: pir:F82279; D-amino acid dehydrogenase, small chain VC0786; E=7e-43 pir:A81228; D-amino acid dehydrogenase, small chain NMB0176; E=1e-42 pir:C82001; D-amino-acid dehydrogenase (EC 1.4.99.1) small subunit; E=3e-40 COG: VC0786; COG0665 Glycine/D-amino acid oxidases (deaminating); E=6e-44 PFAM: PF01494; FAD binding domain; E=0.0014 PF02254; KTN NAD-binding domain; E=0.056 PF02032; Phytoene dehydrogenase related; E=0.013; D-amino acid dehydrogenase, small chain 2722154 dadA 1795503 dadA Rhodopirellula baltica SH 1 D-amino acid dehydrogenase, small chain NP_866608.1 2720784 D 243090 CDS NP_866609.1 32473615 1796995 2722255..2723181 1 NC_005027.1 signal peptide 2723181 1796995 RB5279 Rhodopirellula baltica SH 1 signal peptide NP_866609.1 2722255 D 243090 CDS NP_866610.1 32473616 1792637 complement(2723227..2724033) 1 NC_005027.1 PMID: 7778976 PMID: 8086457 PMID: 11722934 best DB hits: BLAST: pir:S47527; extracellular sucrase - Zymomonas mobilis ----- prf:; E=0.10 swissprot:Q60115; INVB_ZYMMO EXTRACELLULAR SUCRASE; E=0.24 gb:AAC36942.1; (L33403) extracellular sucrase [Zymomonas mobilis]; E=0.24; extracellular sucrase 2724033 1792637 RB5280 Rhodopirellula baltica SH 1 extracellular sucrase NP_866610.1 2723227 R 243090 CDS NP_866611.1 32473617 1790790 complement(2724076..2725707) 1 NC_005027.1 PMID: 8020961 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=6e-47 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=8e-46 pir:KJHUAB; N-acetylgalactosamine-4-sulfatase (EC 3.1.6.12); E=1e-44 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=1e-41 TM1703; COG1368 Phosphoglycerol transferase and related proteins,; E=7e-04 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=0.003 PFAM: PF00884; Sulfatase; E=2.1e-109; N-acetylgalactosamine 6-sulfatase (GALNS) 2725707 1790790 RB5281 Rhodopirellula baltica SH 1 N-acetylgalactosamine 6-sulfatase (GALNS) NP_866611.1 2724076 R 243090 CDS NP_866612.1 32473618 1792047 complement(2725707..2727443) 1 NC_005027.1 PMID: 10809675 best DB hits: BLAST: gb:AAF72520.1; AF248951_1 (AF248951) mucin-desulfating sulfatase; E=2e-32 swissprot:P31447; YIDJ_ECOLI SULFATASE YIDJ -----; E=4e-27 gb:AAG58881.1; AE005599_13 (AE005599) sulfatase; E=8e-26 COG: yidJ; COG3119 Arylsulfatase A and related enzymes; E=3e-28 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=0.005 PFAM: PF00884; Sulfatase; E=1.1e-26; mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase) 2727443 1792047 RB5282 Rhodopirellula baltica SH 1 mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase) NP_866612.1 2725707 R 243090 CDS NP_866613.1 32473619 1795149 complement(2727377..2727532) 1 NC_005027.1 hypothetical protein 2727532 1795149 RB5284 Rhodopirellula baltica SH 1 hypothetical protein NP_866613.1 2727377 R 243090 CDS NP_866614.1 32473620 1791160 complement(2727636..2727872) 1 NC_005027.1 PMID: 8981332 best DB hits: BLAST: gb:AAA67751.1; (U16789) collagen alpha-2 (XI) chain [Mus; E=0.024 gb:AAA67752.1; (U16790) collagen alpha-2 (XI) chain [Mus; E=0.024 pir:A55576; collagen alpha 2(XI) chain precursor, long form - mouse; E=0.024; collagen alpha-2 (XI) chain 2727872 1791160 RB5285 Rhodopirellula baltica SH 1 collagen alpha-2 (XI) chain NP_866614.1 2727636 R 243090 CDS NP_866615.1 32473621 1792177 complement(2727882..2728355) 1 NC_005027.1 signal peptide 2728355 1792177 RB5286 Rhodopirellula baltica SH 1 signal peptide NP_866615.1 2727882 R 243090 CDS NP_866616.1 32473622 1791134 complement(2728431..2729522) 1 NC_005027.1 best DB hits: BLAST: embl:CAB45032.1; (AL078635) large multi-functional; E=3e-22 embl:CAB58265.1; (AL121849) multi-domain protein; E=9e-19 pir:T36423; probable large, multifunctional secreted protein -; E=0.002; large multi-functional protein 2729522 1791134 RB5288 Rhodopirellula baltica SH 1 large multi-functional protein NP_866616.1 2728431 R 243090 CDS NP_866617.1 32473623 1790152 complement(2729519..2730955) 1 NC_005027.1 best DB hits: BLAST: pir:T34927; probable oxidoreductase - Streptomyces coelicolor; E=2e-07 gb:AAC23913.1; (AF039207) NADH-dependent dehydrogenase homolog; E=6e-07 pir:B72359; lipopolysaccharide biosynthesis protein BplA -; E=3e-05 COG: TM0585; COG0673 Predicted dehydrogenases and related proteins; E=3e-06 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=3.2e-18; NADH-dependent dehydrogenase 2730955 1790152 RB5290 Rhodopirellula baltica SH 1 NADH-dependent dehydrogenase NP_866617.1 2729519 R 243090 CDS NP_866618.1 32473624 1790203 complement(2730983..2732584) 1 NC_005027.1 PMID: 9634230 best DB hits: BLAST: pir:F70837; probable sulfatase (EC 3.1.6.-) atsG - Mycobacterium; E=1e-37 prf:2204388A; sulphamidase [Homo sapiens]; E=4e-23 gb:AAG41945.1; AF304053_1 (AF304053) heparan N-sulfatase [Mus; E=8e-23 COG: Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=1e-38 PFAM: PF00884; Sulfatase; E=1.5e-28; sulfatase atsG 2732584 1790203 RB5294 Rhodopirellula baltica SH 1 sulfatase atsG NP_866618.1 2730983 R 243090 CDS NP_866619.1 32473625 1792435 complement(2732591..2734072) 1 NC_005027.1 PMID: 96083602 best DB hits: BLAST: prf:2204388A; sulphamidase [Homo sapiens]; E=6e-47 gb:AAG17207.1; AF217204_1 (AF217204) heparan sulfate sulfamidase; E=6e-45 gb:AAF29467.1; (AF156255) N-sulfoglucosamine sulfohydrolase [Mus; E=4e-44 COG: Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=6e-38 VC2600; COG3083 Predicted hydrolase of alkaline phosphatase; E=9e-05 VNG0061C; COG3119 Arylsulfatase A and related enzymes; E=0.006 PFAM: PF00884; Sulfatase; E=1.4e-43; heparan N-sulfatase 2734072 1792435 RB5295 Rhodopirellula baltica SH 1 heparan N-sulfatase NP_866619.1 2732591 R 243090 CDS NP_866620.1 32473626 1795667 2734032..2734208 1 NC_005027.1 hypothetical protein 2734208 1795667 RB5298 Rhodopirellula baltica SH 1 hypothetical protein NP_866620.1 2734032 D 243090 CDS NP_866621.1 32473627 1792789 complement(2734433..2735635) 1 NC_005027.1 signal peptide 2735635 1792789 RB5300 Rhodopirellula baltica SH 1 signal peptide NP_866621.1 2734433 R 243090 CDS NP_866622.1 32473628 1793922 complement(2735773..2736366) 1 NC_005027.1 PMID: 11823852; signal peptide 2736366 1793922 RB5302 Rhodopirellula baltica SH 1 signal peptide NP_866622.1 2735773 R 243090 CDS NP_866623.1 32473629 1792577 complement(2736514..2736717) 1 NC_005027.1 hypothetical protein 2736717 1792577 RB5303 Rhodopirellula baltica SH 1 hypothetical protein NP_866623.1 2736514 R 243090 CDS NP_866624.1 32473630 1791980 2736686..2737825 1 NC_005027.1 PMID: 10910347 best DB hits: BLAST: pir:C82791; conserved hypothetical protein XF0565 [imported] -; E=2e-39 pir:F72345; ray-related protein - Thermotoga maritima (strain MSB8); E=3e-20 ddbj:BAB15493.1; (AK026507) unnamed protein product [Homo; E=6e-19 COG: XF0565; COG2930 Uncharacterized ACR; E=2e-40 PFAM: PF02590; Uncharacterized ACR, COG1576; E=0.0018; hypothetical protein 2737825 1791980 RB5304 Rhodopirellula baltica SH 1 hypothetical protein NP_866624.1 2736686 D 243090 CDS NP_866625.1 32473631 1790318 2737884..2739260 1 NC_005027.1 PMID: 7910580 best DB hits: BLAST: embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=7e-32 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=7e-32 pdb:1E2S; P Chain P, Crystal Structure Of An Arylsulfatase A; E=1e-31 COG: aslA; COG3119 Arylsulfatase A and related enzymes; E=6e-28 BS_yqgS; COG1368 Phosphoglycerol transferase and related proteins,; E=0.001 VC2600; COG3083 Predicted hydrolase of alkaline phosphatase; E=0.006 PFAM: PF00884; Sulfatase; E=3.5e-33; arylsulphatase A 2739260 1790318 RB5305 Rhodopirellula baltica SH 1 arylsulphatase A NP_866625.1 2737884 D 243090 CDS NP_866626.1 32473632 1796244 complement(2739330..2740187) 1 NC_005027.1 PMID: 2830169 PMID: 1445207 best DB hits: BLAST: gb:AAC24510.1; (AF049243) regulatory protein [Mesorhizobium loti]; E=5e-37 swissprot:P10411; MELR_ECOLI MELIBIOSE OPERON REGULATORY PROTEIN; E=6e-28 ddbj:BAB20427.1; (AB053204) melibiose operon regulatory protein; E=9e-28 COG: melR; COG2207 AraC-type DNA-binding domain-containing proteins; E=6e-29 BS_adaA; COG2169 Adenosine deaminase; E=6e-10 VC1825; COG2207 AraC-type DNA-binding domain-containing proteins; E=2e-09 PFAM: PF00165; Bacterial regulatory helix-turn-heli; E=1.8e-24; melibiose operon regulatory protein 2740187 melR 1796244 melR Rhodopirellula baltica SH 1 melibiose operon regulatory protein NP_866626.1 2739330 R 243090 CDS NP_866627.1 32473633 1792261 2740323..2741906 1 NC_005027.1 PMID: 11259647 best DB hits: BLAST: gb:AAA93130.1; (U09139) chitinase precursor [Aeromonas; E=0.63 gb:AAG09437.1; AF181852_1 (AF181852) chitinase 92 [Aeromonas; E=0.63 PFAM: PF00801; PKD domain; E=0.25 PF00028; Cadherin domain; E=0.047; signal peptide 2741906 1792261 RB5310 Rhodopirellula baltica SH 1 signal peptide NP_866627.1 2740323 D 243090 CDS NP_866628.1 32473634 1791345 2741996..2743363 1 NC_005027.1 PMID: 8955401 PMID: 9427544 best DB hits: BLAST: embl:CAA65785.1; (X97119) pectate lyase [Erwinia chrysanthemi]; E=5e-29 pir:JC6502; pectate lyase (EC 4.2.2.2) - Amycolata sp ----- gb:; E=0.026 gb:AAF23285.1; AC016661_10 (AC016661) pectate lyase; E=0.037; pectate lyase 2743363 pel 1791345 pel Rhodopirellula baltica SH 1 pectate lyase NP_866628.1 2741996 D 243090 CDS NP_866629.1 32473635 1791734 2743385..2745451 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: pir:F72395; hypothetical protein TM0280 - Thermotoga maritima; E=1e-102 gb:AAG58726.1; AE005584_8 (AE005584) orf; hypothetical protein; E=2e-82 ddbj:BAB05596.1; (AP001513) BH1877~unknown conserved protein in; E=6e-15; ATP binding protein 2745451 1791734 RB5313 Rhodopirellula baltica SH 1 ATP binding protein NP_866629.1 2743385 D 243090 CDS NP_866630.1 32473636 1791111 2745433..2746494 1 NC_005027.1 PMID: 8955401 PMID: 1983191 best DB hits: BLAST: pir:JC6502; pectate lyase (EC 4.2.2.2) - Amycolata sp ----- gb:; E=6e-30 pir:D72376; pectate lyase - Thermotoga maritima (strain MSB8); E=1e-26 ddbj:BAA96477.1; (AB041769) pectate lyase Pel-4A [Bacillus sp.; E=3e-25 PFAM: PF00544; Pectate lyase; E=8.6e-31; pectate lyase 2746494 1791111 RB5316 Rhodopirellula baltica SH 1 pectate lyase NP_866630.1 2745433 D 243090 CDS NP_866631.1 32473637 1791607 2746608..2747300 1 NC_005027.1 best DB hits: BLAST: gb:AAB90381.1; (AE001045) D-arabino 3-hexulose 6-phosphate; E=1e-33 pir:B71209; probable D-arabino 3-hexulose 6-phosphate formaldehyde; E=8e-33 pir:C75022; d-arabino 3-hexulose 6-phosphate formaldehyde lyase; E=7e-28 COG: AF0861_1; COG0269 3-hexulose-6-phosphate synthase and related; E=1e-33 sgaH; COG0269 3-hexulose-6-phosphate synthase and related proteins; E=4e-10 VCA0242; COG0269 3-hexulose-6-phosphate synthase and related; E=3e-09 PFAM: PF00834; Ribulose-phosphate 3 epimerase; E=0.56 PF02581; Thiamine monophosphate synthas; E=0.01; D-arabino 3-hexulose 6-phosphate formaldehyde lyase (hps-1) 2747300 1791607 RB5319 Rhodopirellula baltica SH 1 D-arabino 3-hexulose 6-phosphate formaldehyde lyase (hps-1) NP_866631.1 2746608 D 243090 CDS NP_866632.1 32473638 1794563 2747272..2748462 1 NC_005027.1 PMID: 3622514 best DB hits: BLAST: ddbj:BAA75341.1; (AB011837) sorbitol dehydrogenase [Bacillus; E=8e-44 swissprot:P77539; YDJL_ECOLI HYPOTHETICAL ZINC-TYPE ALCOHOL; E=7e-35 gb:AAG56765.1; AE005400_10 (AE005400) oxidoreductase; E=9e-35 COG: BH0189; COG1063 Threonine dehydrogenase and related Zn-dependent; E=7e-45 PFAM: PF00107; Zinc-binding dehydrogenases; E=6.5e-60; zinc-type alcohol dehydrogenase 2748462 1794563 RB5320 Rhodopirellula baltica SH 1 zinc-type alcohol dehydrogenase NP_866632.1 2747272 D 243090 CDS NP_866633.1 32473639 1791668 2748548..2749432 1 NC_005027.1 PMID: 11997336 best DB hits: BLAST: swissprot:P42418; IOLH_BACSU IOLH PROTEIN ----- pir: H69645; E=0.061 swissprot:P49304; MOCC_RHIME RHIZOPINE CATABOLISM PROTEIN MOCC; E=0.20 pir:F72378; conserved hypothetical protein - Thermotoga maritima; E=0.28 COG: BS_iolH; COG1082 Predicted endonucleases; E=0.006 PFAM: PF00631; GGL domain; E=0.31; myo-inositol catabolism protein IolH 2749432 1791668 RB5321 Rhodopirellula baltica SH 1 myo-inositol catabolism protein IolH NP_866633.1 2748548 D 243090 CDS NP_866634.1 32473640 1794884 2749365..2750459 1 NC_005027.1 PMID: 7610479 best DB hits: BLAST: embl:CAB09645.1; (Z96801) hypothetical protein MLCL581.26; E=7e-04 pir:H81408; probable periplasmic protein Cj0609c [imported] -; E=0.41 PFAM: PF00657; Lipase/Acylhydrolase with GDSL-; E=0.63 PF00815; Histidinol dehydrogenase; E=0.3; lipolytic enzyme 2750459 1794884 RB5323 Rhodopirellula baltica SH 1 lipolytic enzyme NP_866634.1 2749365 D 243090 CDS NP_866635.1 32473641 1790529 2750603..2753251 1 NC_005027.1 hypothetical protein 2753251 1790529 RB5326 Rhodopirellula baltica SH 1 hypothetical protein NP_866635.1 2750603 D 243090 CDS NP_866636.1 32473642 1793685 2753241..2754698 1 NC_005027.1 hypothetical protein 2754698 1793685 RB5328 Rhodopirellula baltica SH 1 hypothetical protein NP_866636.1 2753241 D 243090 CDS NP_866637.1 32473643 1794494 complement(2754863..2755486) 1 NC_005027.1 PMID: 8159166 best DB hits: BLAST: pir:S41581; probable phosphoesterase (EC 3.1.-.-) U - Methanothermus; E=6e-04 pir:T35512; hypothetical protein SC6G10.03c - Streptomyces; E=0.002 pir:H69118; probable phosphoesterase (EC 3.1.-.-) MTH1882 -; E=0.016 COG: MTH1882; COG2129 Predicted phosphoesterases, related to the Icc; E=0.001; phosphoesterase 2755486 1794494 RB5332 Rhodopirellula baltica SH 1 phosphoesterase NP_866637.1 2754863 R 243090 CDS NP_866638.1 32473644 1791621 complement(2755483..2757501) 1 NC_005027.1 best DB hits: BLAST: embl:CAB75387.1; (AL139298) hypothetical protein [Streptomyces; E=1e-110 pir:H72336; conserved hypothetical protein - Thermotoga maritima; E=1e-103 pir:S77440; hypothetical protein sll1084 - Synechocystis sp. (strain; E=2e-93 COG: TM0770; COG1032 Fe-S oxidoreductases family 2; E=1e-104 slr0082; COG0621 Fe-S oxidoreductases family 1; E=0.008; Fe-S oxidoreductase 2757501 1791621 RB5334 Rhodopirellula baltica SH 1 Fe-S oxidoreductase NP_866638.1 2755483 R 243090 CDS NP_866639.1 32473645 1793874 2757501..2757821 1 NC_005027.1 PMID: 7868621 best DB hits: BLAST: swissprot:P42436; NASE_BACSU ASSIMILATORY NITRITE REDUCTASE; E=9e-09 pir:T35995; probable dioxygenase (EC 1.14.12.-) Rieske iron-sulfur; E=1e-08 ddbj:BAB04333.1; (AP001509) assimilatory nitrite reductase; E=1e-08 COG: BS_nasE; COG2146 Ferredoxin subunits of nitrite reductase and; E=9e-10 BH1672; COG0723 Rieske Fe-S protein; E=6e-05 XF1472; COG2146 Ferredoxin subunits of nitrite reductase and; E=6e-04 PFAM: PF00355; Rieske [2Fe-2S] domain; E=7.6e-20; assimilatory nitrite reductase [NAD(P)H] small subunit 2757821 nasE 1793874 nasE Rhodopirellula baltica SH 1 assimilatory nitrite reductase [NAD(P)H] small subunit NP_866639.1 2757501 D 243090 CDS NP_866640.1 32473646 1796321 2757894..2760800 1 NC_005027.1 PMID: 11823852 best DB hits: BLAST: pir:A64656; hypothetical protein HP1089 - Helicobacter pylori; E=0.12 pir:C71944; hypothetical protein jhp0336 - Helicobacter pylori; E=0.76 ddbj:BAB06700.1; (AP001517) BH2981~unknown [Bacillus halodurans]; E=0.77; hypothetical protein 2760800 1796321 RB5340 Rhodopirellula baltica SH 1 hypothetical protein NP_866640.1 2757894 D 243090 CDS NP_866641.1 32473647 1791944 2760797..2763571 1 NC_005027.1 best DB hits: BLAST: pir:F81294; probable helicase Cj1481c [imported] - Campylobacter; E=5e-27 pir:A71805; probable ATP-dependent helicase - Helicobacter pylori; E=5e-15 pir:A64714; helicase - Helicobacter pylori (strain 26695) -----; E=2e-14 COG: Cj1481c; COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit; E=4e-28 VC0190; COG0210 Superfamily I DNA and RNA helicases; E=3e-09 CT639; COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit; E=4e-08 PFAM: PF00580; UvrD/REP helicase; E=2.9e-18 PF01443; Viral (Superfamily 1) RNA hel; E=0.085; helicase 2763571 1791944 RB5343 Rhodopirellula baltica SH 1 helicase NP_866641.1 2760797 D 243090 CDS NP_866642.1 32473648 1790689 2763847..2764293 1 NC_005027.1 PMID: 8253675 best DB hits: BLAST: pir:E75550; probable transposase - Deinococcus radiodurans (strain; E=6e-06 pir:F64571; hypothetical protein SARA17 - Helicobacter pylori; E=3e-05 gb:AAG59402.1; AE005653_3 (AE005653) transposase; E=6e-05 COG: DR0177; COG1943 Predicted transposase; E=5e-07 PFAM: PF01797; Transposase IS200 like; E=7.8e-08; transposase 2764293 1790689 RB5346 Rhodopirellula baltica SH 1 transposase NP_866642.1 2763847 D 243090 CDS NP_866643.1 32473649 1794131 2764290..2764442 1 NC_005027.1 hypothetical protein 2764442 1794131 RB5347 Rhodopirellula baltica SH 1 hypothetical protein NP_866643.1 2764290 D 243090 CDS NP_866644.1 32473650 1794238 complement(2764414..2765787) 1 NC_005027.1 PMID: 11292750 best DB hits: BLAST: swissprot:P03835; YI41_ECOLI INSERTION ELEMENT IS4 HYPOTHETICAL; E=0.030 embl:CAA57483.1; (X81894) ORF [Enterobacter agglomerans]; E=0.064 COG: yi41; COG3385 Predicted transposase; E=0.003; transposase 2765787 1794238 RB5348 Rhodopirellula baltica SH 1 transposase NP_866644.1 2764414 R 243090 CDS NP_866645.1 32473651 1795044 2765764..2765985 1 NC_005027.1 hypothetical protein 2765985 1795044 RB5350 Rhodopirellula baltica SH 1 hypothetical protein NP_866645.1 2765764 D 243090 CDS NP_866646.1 32473652 1795717 2766129..2766854 1 NC_005027.1 hypothetical protein 2766854 1795717 RB5351 Rhodopirellula baltica SH 1 hypothetical protein NP_866646.1 2766129 D 243090 CDS NP_866647.1 32473653 1792708 complement(2766367..2767221) 1 NC_005027.1 signal peptide 2767221 1792708 RB5353 Rhodopirellula baltica SH 1 signal peptide NP_866647.1 2766367 R 243090 CDS NP_866648.1 32473654 1791989 2767081..2768349 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein 2768349 1791989 RB5356 Rhodopirellula baltica SH 1 hypothetical protein NP_866648.1 2767081 D 243090 CDS NP_866649.1 32473655 1793631 2768429..2769349 1 NC_005027.1 hypothetical protein 2769349 1793631 RB5359 Rhodopirellula baltica SH 1 hypothetical protein NP_866649.1 2768429 D 243090 CDS NP_866650.1 32473656 1792533 2769388..2769513 1 NC_005027.1 hypothetical protein 2769513 1792533 RB5362 Rhodopirellula baltica SH 1 hypothetical protein NP_866650.1 2769388 D 243090 CDS NP_866651.1 32473657 1796335 2769535..2770170 1 NC_005027.1 PMID: 1991710 best DB hits: BLAST: swissprot:O67866; FLAV_AQUAE FLAVODOXIN ----- pir: F70479; E=3e-48 swissprot:P18855; FLAV_CLOAB FLAVODOXIN ----- pir: A38177; E=2e-13 pir:G82110; Trp repressor-binding protein VC2166 [imported] - Vibrio; E=6e-13 COG: aq_2096; COG0655 Multimeric flavodoxin WrbA; E=3e-49 AF1520; COG0426 Uncharacterized flavoproteins; E=0.006 PFAM: PF00258; Flavodoxin; E=1.4e-08; flavodoxin 2770170 1796335 RB5363 Rhodopirellula baltica SH 1 flavodoxin NP_866651.1 2769535 D 243090 CDS NP_866652.1 32473658 1794731 2770233..2771630 1 NC_005027.1 best DB hits: BLAST: gb:AAC23913.1; (AF039207) NADH-dependent dehydrogenase homolog; E=4e-10 gb:AAC31181.1; (AF076240) unknown [Rhizobium leguminosarum bv.; E=2e-09 ddbj:BAB05884.1; (AP001514) BH2165~unknown conserved protein; E=6e-09 COG: BH2165; COG0673 Predicted dehydrogenases and related proteins; E=5e-10 PFAM: PF01408; Oxidoreductase, NAD-bin; E=3.1e-15; NADH-dependent dehydrogenase 2771630 1794731 RB5365 Rhodopirellula baltica SH 1 NADH-dependent dehydrogenase NP_866652.1 2770233 D 243090 CDS NP_866653.1 32473659 1790895 complement(2771651..2773393) 1 NC_005027.1 PMID: 2105293 best DB hits: BLAST: gb:AAG60934.1; AF322013_53 (AF322013) ID556 [Bradyrhizobium; E=9e-68 gb:AAG60822.1; AF322012_127 (AF322013) ID270 [Bradyrhizobium; E=4e-67 swissprot:P17867; CISA_BACSU DNA RECOMBINASE -----; E=1e-30 COG: BS_spoIVCA; COG1961 Site-specific recombinases, DNA invertase Pin; E=1e-31 pin; COG1961 Site-specific recombinases, DNA invertase Pin homologs; E=4e-04 PH1174; COG1961 Site-specific recombinases, DNA invertase Pin; E=0.003 PFAM: PF00239; Resolvase class of site-specific re; E=4.3e-18; DNA recombinase 2773393 1790895 RB5367 Rhodopirellula baltica SH 1 DNA recombinase NP_866653.1 2771651 R 243090 CDS NP_866654.1 32473660 1792885 complement(2773390..2773587) 1 NC_005027.1 hypothetical protein 2773587 1792885 RB5368 Rhodopirellula baltica SH 1 hypothetical protein NP_866654.1 2773390 R 243090 CDS NP_866655.1 32473661 1792894 complement(2773636..2773896) 1 NC_005027.1 hypothetical protein 2773896 1792894 RB5369 Rhodopirellula baltica SH 1 hypothetical protein NP_866655.1 2773636 R 243090 CDS NP_866656.1 32473662 1797020 complement(2773897..2774826) 1 NC_005027.1 PMID: 11759840 best DB hits: BLAST: embl:CAB93418.1; (AL357524) transposase [Streptomyces; E=0.60; transposase 2774826 1797020 RB5370 Rhodopirellula baltica SH 1 transposase NP_866656.1 2773897 R 243090 CDS NP_866657.1 32473663 1790866 2774829..2775158 1 NC_005027.1 hypothetical protein 2775158 1790866 RB5371 Rhodopirellula baltica SH 1 hypothetical protein NP_866657.1 2774829 D 243090 CDS NP_866658.1 32473664 1790878 complement(2775270..2775404) 1 NC_005027.1 hypothetical protein 2775404 1790878 RB5373 Rhodopirellula baltica SH 1 hypothetical protein NP_866658.1 2775270 R 243090 CDS NP_866659.1 32473665 1793132 complement(2775439..2776053) 1 NC_005027.1 best DB hits: PFAM: PF00515; TPR Domain; E=0.61; hypothetical protein 2776053 1793132 RB5374 Rhodopirellula baltica SH 1 hypothetical protein NP_866659.1 2775439 R 243090 CDS NP_866660.1 32473666 1791034 complement(2776104..2776583) 1 NC_005027.1 signal peptide 2776583 1791034 RB5377 Rhodopirellula baltica SH 1 signal peptide NP_866660.1 2776104 R 243090 CDS NP_866661.1 32473667 1791365 complement(2776699..2778171) 1 NC_005027.1 PMID: 10336424 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=2e-36 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=2e-34 gb:AAF30402.1; AF109924_1 (AF109924) sulfatase 1 precursor [Helix; E=1e-33 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=1e-29 PFAM: PF02418; Integral membrane protein of unk; E=0.83 PF00884; Sulfatase; E=6.6e-32; aryl-sulphate sulphohydrolase 2778171 1791365 RB5378 Rhodopirellula baltica SH 1 aryl-sulphate sulphohydrolase NP_866661.1 2776699 R 243090 CDS NP_866662.1 32473668 1790644 complement(2778338..2779759) 1 NC_005027.1 PMID: 8063104 best DB hits: BLAST: pir:H69064; serinethreonine protein kinase related protein -; E=9e-06 swissprot:P54741; AFSK_STRCO SERINETHREONINE PROTEIN KINASE AFSK; E=0.007 swissprot:P54742; AFSK_STRGR SERINETHREONINE PROTEIN KINASE AFSK; E=0.007 COG: MTH1485; COG1520 Uncharacterized proteins of WD40-like repeat family; E=8e-07 PFAM: PF01011; PQQ enzyme repeat; E=0.0098; serine/threonine protein kinase 2779759 1790644 RB5380 Rhodopirellula baltica SH 1 serine/threonine protein kinase NP_866662.1 2778338 R 243090 CDS NP_866663.1 32473669 1792430 complement(2779695..2781371) 1 NC_005027.1 PMID: 10950929 best DB hits: BLAST: pir:F70837; probable sulfatase (EC 3.1.6.-) atsG - Mycobacterium; E=8e-23 gb:AAG41945.1; AF304053_1 (AF304053) heparan N-sulfatase [Mus; E=1e-20 gb:AAF29467.1; (AF156255) N-sulfoglucosamine sulfohydrolase [Mus; E=2e-20 COG: Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=8e-24 PFAM: PF00884; Sulfatase; E=5.2e-13; sulfatase atsG 2781371 1792430 RB5383 Rhodopirellula baltica SH 1 sulfatase atsG NP_866663.1 2779695 R 243090 CDS NP_866664.1 32473670 1793542 complement(2781546..2781656) 1 NC_005027.1 hypothetical protein 2781656 1793542 RB5385 Rhodopirellula baltica SH 1 hypothetical protein NP_866664.1 2781546 R 243090 CDS NP_866665.1 32473671 1792584 complement(2781669..2782331) 1 NC_005027.1 hypothetical protein 2782331 1792584 RB5387 Rhodopirellula baltica SH 1 hypothetical protein NP_866665.1 2781669 R 243090 CDS NP_866666.1 32473672 1791557 complement(2782443..2782853) 1 NC_005027.1 hypothetical protein 2782853 1791557 RB5389 Rhodopirellula baltica SH 1 hypothetical protein NP_866666.1 2782443 R 243090 CDS NP_866667.1 32473673 1796350 complement(2782834..2782980) 1 NC_005027.1 hypothetical protein 2782980 1796350 RB5390 Rhodopirellula baltica SH 1 hypothetical protein NP_866667.1 2782834 R 243090 CDS NP_866668.1 32473674 1795870 2782952..2783086 1 NC_005027.1 hypothetical protein 2783086 1795870 RB5391 Rhodopirellula baltica SH 1 hypothetical protein NP_866668.1 2782952 D 243090 CDS NP_866669.1 32473675 1792302 2783068..2784183 1 NC_005027.1 PMID: 3106153 best DB hits: BLAST: pir:A81199; prephenate dehydrogenase, probable NMB0440 [imported] -; E=2e-23 pir:A81775; probable oxidoreductase NMA2045 [imported] - Neisseria; E=6e-23 gb:AAF06694.1; AF163663_19 (AF058689) prephenate; E=3e-22 COG: NMB0440; COG0287 Prephenate dehydrogenase; E=2e-24 PFAM: PF02153; Prephenate dehydrogenase; E=5.3e-69; prephenate dehydrogenase 2784183 tyrA 1792302 tyrA Rhodopirellula baltica SH 1 prephenate dehydrogenase NP_866669.1 2783068 D 243090 CDS NP_866670.1 32473676 1794655 2784253..2787282 1 NC_005027.1 PMID: 2659070 PMID: 2531746 best DB hits: BLAST: gb:AAB89311.1; (AE000969) phosphoribosylformylglycinamidine; E=1e-113 embl:CAC12194.1; (AL445066) phosphoribosylformylglycinamidine; E=1e-102 embl:CAB56359.1; (AL118514) phosphoribosyl formylglycinamidine; E=1e-80 COG: AF1940; COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase,; E=1e-114 NMB1996_1; COG0046 Phosphoribosylformylglycinamidine (FGAM); E=2e-52 TM1246; COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase,; E=1e-50 PFAM: PF00586; AIR synthase related protein, N-term; E=1e-24 PF02769; AIR synthase related protein, C-term; E=1.7e-22 PF00586; AIR synthase related protein, N-term; E=0.28; phosphoribosylformylglycinamidine synthase II 2787282 purL 1794655 purL Rhodopirellula baltica SH 1 phosphoribosylformylglycinamidine synthase II NP_866670.1 2784253 D 243090 CDS NP_866671.1 32473677 1796109 2787332..2787904 1 NC_005027.1 hypothetical protein 2787904 1796109 RB5396 Rhodopirellula baltica SH 1 hypothetical protein NP_866671.1 2787332 D 243090 CDS NP_866672.1 32473678 1794630 2788006..2789016 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 2789016 1794630 RB5399 Rhodopirellula baltica SH 1 signal peptide NP_866672.1 2788006 D 243090 CDS NP_866673.1 32473679 1795109 complement(2789017..2790207) 1 NC_005027.1 hypothetical protein 2790207 1795109 RB5401 Rhodopirellula baltica SH 1 hypothetical protein NP_866673.1 2789017 R 243090 CDS NP_866674.1 32473680 1795791 complement(2790208..2790360) 1 NC_005027.1 hypothetical protein 2790360 1795791 RB5403 Rhodopirellula baltica SH 1 hypothetical protein NP_866674.1 2790208 R 243090 CDS NP_866675.1 32473681 1792144 complement(2790381..2791475) 1 NC_005027.1 best DB hits: BLAST: embl:CAB76850.1; (AL049698) dJ470B24.1.3 (myeloidlymphoid or; E=0.73 embl:CAB76849.1; (AL049698) dJ470B24.1.5 (myeloidlymphoid or; E=0.78; hypothetical protein 2791475 1792144 RB5404 Rhodopirellula baltica SH 1 hypothetical protein NP_866675.1 2790381 R 243090 CDS NP_866676.1 32473682 1794617 complement(2791576..2792193) 1 NC_005027.1 PMID: 8034591 PMID: 8522195 best DB hits: BLAST: ddbj:BAB05136.1; (AP001512) 5-formyltetrahydrofolate cyclo-ligase; E=7e-17 pir:C70449; conserved hypothetical protein aq_1731 - Aquifex; E=3e-16 swissprot:P54491; YQGN_BACSU HYPOTHETICAL 21.4 KD PROTEIN IN; E=8e-14 COG: BH1417; COG0212 5-formyltetrahydrofolate cyclo-ligase; E=7e-18 PFAM: PF01812; 5-formyltetrahydrofolate cyclo; E=1.4e-38; 5-formyltetrahydrofolate cyclo-ligase 2792193 mthfs 1794617 mthfs Rhodopirellula baltica SH 1 5-formyltetrahydrofolate cyclo-ligase NP_866676.1 2791576 R 243090 CDS NP_866677.1 32473683 1790838 complement(2792209..2793894) 1 NC_005027.1 PMID: 1659648 best DB hits: BLAST: gb:AAF01486.1; AF137263_5 (AF137263) L-fuculose kinase; E=1e-84 ddbj:BAB05270.1; (AP001512) rhamnulokinase [Bacillus halodurans]; E=3e-79 pir:E70014; rhamnulokinase (EC 2.7.1.5) yulC - Bacillus subtilis; E=8e-75 COG: BH1551; COG1070 Sugar (pentulose and hexulose) kinases; E=2e-80 VNG1967G; COG0554 Glycerol kinase; E=2e-04 BH2676; COG1070 Sugar (pentulose and hexulose) kinases; E=0.004 PFAM: PF00370; FGGY family of carbohydrate kin; E=7.3e-12 PF02782; FGGY family of carbohydrate kin; E=0.11; carbohydrate kinase 2793894 1790838 RB5406 Rhodopirellula baltica SH 1 carbohydrate kinase NP_866677.1 2792209 R 243090 CDS NP_866678.1 32473684 1790360 2793914..2794132 1 NC_005027.1 hypothetical protein 2794132 1790360 RB5407 Rhodopirellula baltica SH 1 hypothetical protein NP_866678.1 2793914 D 243090 CDS NP_866679.1 32473685 1795039 2794195..2794488 1 NC_005027.1 hypothetical protein 2794488 1795039 RB5409 Rhodopirellula baltica SH 1 hypothetical protein NP_866679.1 2794195 D 243090 CDS NP_866680.1 32473686 1794061 2794516..2794623 1 NC_005027.1 hypothetical protein 2794623 1794061 RB5411 Rhodopirellula baltica SH 1 hypothetical protein NP_866680.1 2794516 D 243090 CDS NP_866681.1 32473687 1790856 complement(2794620..2794838) 1 NC_005027.1 hypothetical protein 2794838 1790856 RB5412 Rhodopirellula baltica SH 1 hypothetical protein NP_866681.1 2794620 R 243090 CDS NP_866682.1 32473688 1794544 2794930..2798715 1 NC_005027.1 PMID: 6266829 best DB hits: BLAST: swissprot:Q9Z9A0; RPOB_CHLPN DNA-DIRECTED RNA POLYMERASE BETA CHAIN; E=0.0 pir:F81548; DNA-directed RNA polymerase, beta chain CP0694 [imported]; E=0.0 ddbj:BAA98291.1; (AP002545) RNA polymerase beta [Chlamydophila; E=0.0 COG: CPn0081; COG0085 DNA-directed RNA polymerase beta subunit/140 kD; E=0.0 CT315; COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; E=0.0 PA4270; COG0085 DNA-directed RNA polymerase beta subunit/140 kD; E=0.0 PFAM: PF01155; Hydrogenase expression/synthesi; E=0.17 PF00562; RNA polymerase beta subunit; E=0; DNA-directed RNA polymerase beta chain 2798715 rpoB 1794544 rpoB Rhodopirellula baltica SH 1 DNA-directed RNA polymerase beta chain NP_866682.1 2794930 D 243090 CDS NP_866683.1 32473689 1790343 2798737..2798925 1 NC_005027.1 hypothetical protein 2798925 1790343 RB5415 Rhodopirellula baltica SH 1 hypothetical protein NP_866683.1 2798737 D 243090 CDS NP_866684.1 32473690 1793800 2798945..2803234 1 NC_005027.1 PMID: 3219133 best DB hits: BLAST: swissprot:P19176; RPOC_PSEPU DNA-DIRECTED RNA POLYMERASE BETA' CHAIN; E=0.0 swissprot:P00577; RPOC_ECOLI DNA-DIRECTED RNA POLYMERASE BETA' CHAIN; E=0.0 prf:0808241A; polymerase beta',RNA [Escherichia coli]; E=0.0 COG: rpoC; COG0086 DNA-directed RNA polymerase beta' subunit/160 kD subunit; E=0.0 BU033; COG0086 DNA-directed RNA polymerase beta' subunit/160 kD; E=0.0 PFAM: PF00623; RNA polymerase alpha subunit; E=2.3e-275 PF01854; RNA polymerase A/beta'/A sub; E=8.5e-10 PF01333; Apocytochrome F; E=0.26; DNA-directed RNA polymerase beta chain 2803234 rpoC 1793800 rpoC Rhodopirellula baltica SH 1 DNA-directed RNA polymerase beta chain NP_866684.1 2798945 D 243090 CDS NP_866685.1 32473691 1792861 2803525..2804967 1 NC_005027.1 PMID: 2303452 best DB hits: BLAST: gb:AAF49287.1; (AE003522) CG7402 gene product [Drosophila; E=1e-37 gb:AAF30402.1; AF109924_1 (AF109924) sulfatase 1 precursor [Helix; E=2e-37 gb:AAF49302.1; (AE003522) CG5584 gene product [Drosophila; E=9e-37 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=2e-28 PFAM: PF00884; Sulfatase; E=1.5e-44; N-acetylgalactosamine-6-sulfatase 2804967 1792861 RB5417 Rhodopirellula baltica SH 1 N-acetylgalactosamine-6-sulfatase NP_866685.1 2803525 D 243090 CDS NP_866686.1 32473692 1792862 complement(2804964..2805185) 1 NC_005027.1 signal peptide 2805185 1792862 RB5418 Rhodopirellula baltica SH 1 signal peptide NP_866686.1 2804964 R 243090 CDS NP_866687.1 32473693 1791850 2805142..2805657 1 NC_005027.1 PMID: 11743193 best DB hits: PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=0.00066; hypothetical protein 2805657 1791850 RB5420 Rhodopirellula baltica SH 1 hypothetical protein NP_866687.1 2805142 D 243090 CDS NP_866688.1 32473694 1790389 2805590..2807302 1 NC_005027.1 PMID: 9406417 PMID: 11157277 best DB hits: BLAST: pir:T18266; cycloinulo-oligosaccharide fructanotransferase (EC; E=0.10 gb:AAG47946.1; AF222787_1 (AF222787) cycloinulo-oligosaccharide; E=0.22; cycloinulo-oligosaccharide fructanotransferase 2807302 1790389 RB5421 Rhodopirellula baltica SH 1 cycloinulo-oligosaccharide fructanotransferase NP_866688.1 2805590 D 243090 CDS NP_866689.1 32473695 1793225 2807339..2809060 1 NC_005027.1 PMID: 8244397 best DB hits: BLAST: gb:AAA16877.1; (L13329) iduronate-2-sulfatase [Homo sapiens]; E=5e-57 gb:AAB33747.1; iduronate-2-sulfatase, IDS {EC 3.1.6.13} [human,; E=2e-56 gb:AAA37880.1; (L07921) iduronate sulfatase [Mus musculus]; E=5e-54 COG: PA0031; COG3119 Arylsulfatase A and related enzymes; E=1e-30 PA0924; COG3083 Predicted hydrolase of alkaline phosphatase; E=9e-05 BS_yfnI; COG1368 Phosphoglycerol transferase and related proteins,; E=0.001 PFAM: PF00884; Sulfatase; E=2.6e-28 PF02418; Integral membrane protein of unknow; E=0.71 PF00884; Sulfatase; E=3.1e-27; iduronate-2-sulfatase 2809060 1793225 RB5424 Rhodopirellula baltica SH 1 iduronate-2-sulfatase NP_866689.1 2807339 D 243090 CDS NP_866690.1 32473696 1793557 2809030..2811849 1 NC_005027.1 hypothetical protein 2811849 1793557 RB5426 Rhodopirellula baltica SH 1 hypothetical protein NP_866690.1 2809030 D 243090 CDS NP_866691.1 32473697 1791512 2811866..2813368 1 NC_005027.1 hypothetical protein 2813368 1791512 RB5428 Rhodopirellula baltica SH 1 hypothetical protein NP_866691.1 2811866 D 243090 CDS NP_866692.1 32473698 1793561 complement(2813478..2814860) 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: pir:D72313; hypothetical protein TM0945 - Thermotoga maritima; E=2e-46 pir:D82689; conserved hypothetical protein XF1384 [imported] -; E=4e-22 gb:AAF04097.1; AF188291_3 (AF188291) PqaA [Salmonella typhi]; E=2e-17; hypothetical protein 2814860 1793561 RB5429 Rhodopirellula baltica SH 1 hypothetical protein NP_866692.1 2813478 R 243090 CDS NP_866693.1 32473699 1795745 complement(2814809..2814997) 1 NC_005027.1 best DB hits: PFAM: PF02822; Antistasin family; E=0.39; hypothetical protein 2814997 1795745 RB5430 Rhodopirellula baltica SH 1 hypothetical protein NP_866693.1 2814809 R 243090 CDS NP_866694.1 32473700 1794271 2815149..2815646 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: pir:A72342; conserved hypothetical protein - Thermotoga maritima; E=9e-41 pir:H70472; conserved hypothetical protein aq_2013 - Aquifex; E=2e-30 pir:B71118; hypothetical protein PH0713 - Pyrococcus horikoshii; E=2e-16 COG: TM0723; COG0432 Uncharacterized ACR; E=9e-42 PFAM: PF01894; Uncharacterised protein family UPF00; E=9.2e-38; hypothetical protein 2815646 1794271 RB5432 Rhodopirellula baltica SH 1 hypothetical protein NP_866694.1 2815149 D 243090 CDS NP_866695.1 32473701 1796240 2815643..2815819 1 NC_005027.1 hypothetical protein 2815819 1796240 RB5433 Rhodopirellula baltica SH 1 hypothetical protein NP_866695.1 2815643 D 243090 CDS NP_866696.1 32473702 1792398 complement(2815776..2817863) 1 NC_005027.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 2817863 fusA 1792398 fusA Rhodopirellula baltica SH 1 elongation factor G NP_866696.1 2815776 R 243090 CDS NP_866697.1 32473703 1790927 2817808..2818044 1 NC_005027.1 signal peptide 2818044 1790927 RB5435 Rhodopirellula baltica SH 1 signal peptide NP_866697.1 2817808 D 243090 CDS NP_866698.1 32473704 1793089 2818164..2819081 1 NC_005027.1 catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase 2819081 pnp 1793089 pnp Rhodopirellula baltica SH 1 purine nucleoside phosphorylase NP_866698.1 2818164 D 243090 CDS NP_866699.1 32473705 1792874 2819062..2819814 1 NC_005027.1 PMID: 8575452 best DB hits: BLAST: swissprot:O87391; GLXC_RHIME GLXC PROTEIN ----- gb: AAC62221.1; E=1e-15 pir:C69123; tungsten formylmethanofuran dehydrogenase, subunit C; E=7e-13 swissprot:Q58571; FWDC_METJA TUNGSTEN-CONTAINING; E=1e-11 COG: MTH192; COG0070 Glutamate synthetase domain 3; E=7e-14 MJ1171; COG2218 Formylmethanofuran dehydrogenase subunit C; E=1e-12 MJ1350; COG0070 Glutamate synthetase domain 3; E=5e-08 PFAM: PF01493; Domain of unknown function DUF14; E=2.1e-09; tungsten formylmethanofuran dehydrogenase, subunit C-like protein 2819814 fwdC 1792874 fwdC Rhodopirellula baltica SH 1 tungsten formylmethanofuran dehydrogenase, subunit C-like protein NP_866699.1 2819062 D 243090 CDS NP_866700.1 32473706 1792290 complement(2819950..2821104) 1 NC_005027.1 hypothetical protein 2821104 1792290 RB5442 Rhodopirellula baltica SH 1 hypothetical protein NP_866700.1 2819950 R 243090 CDS NP_866701.1 32473707 1794938 2821246..2822433 1 NC_005027.1 methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 2822433 metK 1794938 metK Rhodopirellula baltica SH 1 S-adenosylmethionine synthetase NP_866701.1 2821246 D 243090 CDS NP_866702.1 32473708 1792654 2822354..2823322 1 NC_005027.1 PMID: 8260624 best DB hits: BLAST: embl:CAB08432.1; (Z95151) Icc [Mycobacterium leprae]; E=0.062 pir:S44374; phosphoglycerate mutase (EC 5.4.2.1) - castor bean; E=0.20 swissprot:Q42908; PMGI_MESCR 2,3-BISPHOSPHOGLYCERATE-INDEPENDENT; E=0.22; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2823322 1792654 RB5445 Rhodopirellula baltica SH 1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase NP_866702.1 2822354 D 243090 CDS NP_866703.1 32473709 1795185 2823580..2823756 1 NC_005027.1 hypothetical protein 2823756 1795185 RB5447 Rhodopirellula baltica SH 1 hypothetical protein NP_866703.1 2823580 D 243090 CDS NP_866704.1 32473710 1791990 complement(2823795..2824412) 1 NC_005027.1 hypothetical protein 2824412 1791990 RB5448 Rhodopirellula baltica SH 1 hypothetical protein NP_866704.1 2823795 R 243090 CDS NP_866705.1 32473711 1793735 2824383..2824532 1 NC_005027.1 hypothetical protein 2824532 1793735 RB5449 Rhodopirellula baltica SH 1 hypothetical protein NP_866705.1 2824383 D 243090 CDS NP_866706.1 32473712 1795409 2824513..2824635 1 NC_005027.1 hypothetical protein 2824635 1795409 RB5450 Rhodopirellula baltica SH 1 hypothetical protein NP_866706.1 2824513 D 243090 CDS NP_866707.1 32473713 1789961 2824632..2825756 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein 2825756 1789961 RB5451 Rhodopirellula baltica SH 1 hypothetical protein NP_866707.1 2824632 D 243090 CDS NP_866708.1 32473714 1790302 complement(2825855..2826199) 1 NC_005027.1 hypothetical protein 2826199 1790302 RB5454 Rhodopirellula baltica SH 1 hypothetical protein NP_866708.1 2825855 R 243090 CDS NP_866709.1 32473715 1793536 2826045..2826395 1 NC_005027.1 hypothetical protein 2826395 1793536 RB5455 Rhodopirellula baltica SH 1 hypothetical protein NP_866709.1 2826045 D 243090 CDS NP_866710.1 32473716 1793954 complement(2826426..2826983) 1 NC_005027.1 signal peptide 2826983 1793954 RB5456 Rhodopirellula baltica SH 1 signal peptide NP_866710.1 2826426 R 243090 CDS NP_866711.1 32473717 1791974 2827115..2827360 1 NC_005027.1 hypothetical protein 2827360 1791974 RB5457 Rhodopirellula baltica SH 1 hypothetical protein NP_866711.1 2827115 D 243090 CDS NP_866712.1 32473718 1791258 2827385..2827831 1 NC_005027.1 signal peptide 2827831 1791258 RB5458 Rhodopirellula baltica SH 1 signal peptide NP_866712.1 2827385 D 243090 CDS NP_866713.1 32473719 1790412 complement(2827930..2828544) 1 NC_005027.1 signal peptide 2828544 1790412 RB5460 Rhodopirellula baltica SH 1 signal peptide NP_866713.1 2827930 R 243090 CDS NP_866714.1 32473720 1794091 complement(2828717..2829001) 1 NC_005027.1 hypothetical protein 2829001 1794091 RB5462 Rhodopirellula baltica SH 1 hypothetical protein NP_866714.1 2828717 R 243090 CDS NP_866715.1 32473721 1792311 2829125..2829445 1 NC_005027.1 hypothetical protein 2829445 1792311 RB5464 Rhodopirellula baltica SH 1 hypothetical protein NP_866715.1 2829125 D 243090 CDS NP_866716.1 32473722 1790426 2829449..2830423 1 NC_005027.1 PMID: 7699720 best DB hits: BLAST: pir:D83041; probable two-component response regulator PA4843; E=4e-20 pir:F82960; hypothetical protein PA5487 [imported] - Pseudomonas; E=5e-18 pir:A82428; sensory boxGGDEF family protein VCA0697 [imported] -; E=4e-17 COG: PA5487; COG2199 Diguanylate cyclase/phosphodiesterase domain 1; E=5e-19 PFAM: PF00072; Response regulator receiver doma; E=3.1e-13 PF00990; GGDEF domain; E=3.1e-35; two-component response regulator 2830423 1790426 RB5465 Rhodopirellula baltica SH 1 two-component response regulator NP_866716.1 2829449 D 243090 CDS NP_866717.1 32473723 1790370 2830396..2830512 1 NC_005027.1 hypothetical protein 2830512 1790370 RB5466 Rhodopirellula baltica SH 1 hypothetical protein NP_866717.1 2830396 D 243090 CDS NP_866718.1 32473724 1794336 complement(2830492..2831490) 1 NC_005027.1 PMID: 10567266 best DB hits: PFAM: PF00561; alpha/beta hydrolase fold; E=0.1; signal peptide 2831490 1794336 RB5468 Rhodopirellula baltica SH 1 signal peptide NP_866718.1 2830492 R 243090 CDS NP_866719.1 32473725 1792989 complement(2831653..2832027) 1 NC_005027.1 PMID: 1645442 best DB hits: BLAST: pir:S75664; sensory transduction system regulatory protein slr1983 -; E=8e-04 pir:G83183; probable chemotaxis sensoreffector fusion protein; E=0.002 pir:D82696; hypothetical protein XF1330 [imported] - Xylella; E=0.005 COG: slr1983_2; COG0784 CheY-like receiver domains; E=8e-05 jhp1283; COG0745 Response regulators consisting of a CheY-like; E=8e-04 BS_yufM; COG2197 Response regulators consisting of a CheY-like; E=0.002 PFAM: PF00072; Response regulator receiver doma; E=9.9e-06; sensory transduction system regulatory protein 2832027 1792989 RB5471 Rhodopirellula baltica SH 1 sensory transduction system regulatory protein NP_866719.1 2831653 R 243090 CDS NP_866720.1 32473726 1796767 complement(2832015..2832428) 1 NC_005027.1 PMID: 1454550 best DB hits: BLAST: embl:CAB94653.1; (AL359215) two-component system; E=3e-12 pir:D72374; response regulator - Thermotoga maritima (strain MSB8); E=2e-11 embl:CAC04498.1; (AL391588) two-component system; E=5e-11 COG: TM0468; COG0784 CheY-like receiver domains; E=2e-12 BS_phoP; COG0745 Response regulators consisting of a CheY-like; E=3e-11 slr0322_3; COG0784 CheY-like receiver domains; E=3e-10 PFAM: PF00072; Response regulator receiver doma; E=9.1e-23; two-component system response regulator 2832428 1796767 RB5472 Rhodopirellula baltica SH 1 two-component system response regulator NP_866720.1 2832015 R 243090 CDS NP_866721.1 32473727 1792651 2832627..2832782 1 NC_005027.1 hypothetical protein 2832782 1792651 RB5474 Rhodopirellula baltica SH 1 hypothetical protein NP_866721.1 2832627 D 243090 CDS NP_866722.1 32473728 1792078 complement(2832768..2833076) 1 NC_005027.1 hypothetical protein 2833076 1792078 RB5475 Rhodopirellula baltica SH 1 hypothetical protein NP_866722.1 2832768 R 243090 CDS NP_866723.1 32473729 1790978 complement(2833159..2833284) 1 NC_005027.1 hypothetical protein 2833284 1790978 RB5476 Rhodopirellula baltica SH 1 hypothetical protein NP_866723.1 2833159 R 243090 CDS NP_866724.1 32473730 1794692 complement(2833363..2833992) 1 NC_005027.1 PMID: 1454550 best DB hits: BLAST: pir:T17197; adenylate cyclase homolog - Spirulina platensis -----; E=2e-09 gb:AAD30120.2; (AF135389) DNA binding response regulator RpaA; E=2e-08 pir:S75923; sensory transduction system regulatory protein sll1555 -; E=4e-08 COG: slr2024; COG0784 CheY-like receiver domains; E=9e-09 slr0115; COG0745 Response regulators consisting of a CheY-like; E=1e-08 TP0519; COG2204 AAA superfamily ATPases with N-terminal receiver; E=2e-08 PFAM: PF00072; Response regulator receiver doma; E=2.4e-10; two component system response regulator 2833992 1794692 RB5477 Rhodopirellula baltica SH 1 two component system response regulator NP_866724.1 2833363 R 243090 CDS NP_866725.1 32473731 1790570 complement(2834064..2834459) 1 NC_005027.1 PMID: 7699720 best DB hits: BLAST: embl:CAB88489.1; (AL353816) two-component systen; E=1e-15 gb:AAB06615.1; (U53173) MviA [Salmonella typhimurium]; E=2e-14 gb:AAD30120.2; (AF135389) DNA binding response regulator RpaA; E=1e-13 COG: slr0115; COG0745 Response regulators consisting of a CheY-like; E=1e-13 XF1952_3; COG0784 CheY-like receiver domains; E=3e-13 Rv0981; COG0745 Response regulators consisting of a CheY-like; E=3e-12 PFAM: PF00072; Response regulator receiver doma; E=2.4e-27; two-component system response regulator 2834459 1790570 RB5478 Rhodopirellula baltica SH 1 two-component system response regulator NP_866725.1 2834064 R 243090 CDS NP_866726.1 32473732 1795646 complement(2834555..2836279) 1 NC_005027.1 PMID: 3142862 best DB hits: BLAST: swissprot:P23545; PHOR_BACSU ALKALINE PHOSPHATASE SYNTHESIS SENSOR; E=1e-28 pir:S75514; sensory transduction histidine kinase slr1324 -; E=2e-27 pir:E83529; sensorresponse regulator hybrid PA0928 [imported] -; E=6e-25 COG: BS_phoR_3; COG0642 Sensory transduction histidine kinases; E=1e-29 PFAM: PF00072; Response regulator receiver do; E=4.5e-14 PF00512; His Kinase A (phosphoacceptor); E=6.3e-16 PF02518; Histidine kinase-, DNA gyrase; E=5.3e-31; sensory transduction histidine kinase 2836279 1795646 RB5479 Rhodopirellula baltica SH 1 sensory transduction histidine kinase NP_866726.1 2834555 R 243090 CDS NP_866727.1 32473733 1792107 complement(2836143..2836799) 1 NC_005027.1 PMID: 7699720 best DB hits: BLAST: ddbj:BAA14000.1; (D89625) adenylate cyclase [Anabaena sp.]; E=2e-12 pir:T17197; adenylate cyclase homolog - Spirulina platensis -----; E=8e-12 gb:AAB89775.1; (AE001001) response regulator [Archaeoglobus; E=7e-10 COG: AF1473; COG0784 CheY-like receiver domains; E=7e-11 slr0115; COG0745 Response regulators consisting of a CheY-like; E=2e-10 sll1555_1; COG0784 CheY-like receiver domains; E=6e-10 PFAM: PF00072; Response regulator receiver doma; E=2.3e-16; response regulator 2836799 1792107 RB5482 Rhodopirellula baltica SH 1 response regulator NP_866727.1 2836143 R 243090 CDS NP_866728.1 32473734 1796890 complement(2836850..2837047) 1 NC_005027.1 hypothetical protein 2837047 1796890 RB5485 Rhodopirellula baltica SH 1 hypothetical protein NP_866728.1 2836850 R 243090 CDS NP_866729.1 32473735 1795626 2837058..2838266 1 NC_005027.1 PMID: 10200516 best DB hits: BLAST: swissprot:Q94775; GBLP_TRYBB GUANINE NUCLEOTIDE-BINDING PROTEIN; E=0.14 pir:T47324; hypothetical protein T12K4.110 - Arabidopsis thaliana; E=0.29 gb:AAC72849.1; (AF100286) activated protein kinase C receptor; E=0.58 PFAM: PF00400; WD domain, G-beta repeat; E=0.0071; activated protein kinase C receptor-like protein 2838266 1795626 RB5486 Rhodopirellula baltica SH 1 activated protein kinase C receptor-like protein NP_866729.1 2837058 D 243090 CDS NP_866730.1 32473736 1793884 complement(2838414..2841692) 1 NC_005027.1 best DB hits: BLAST: pir:F82263; probable multidrug resistance protein VC0914 [imported] -; E=1e-47 pir:H82300; probable multidrug resistance protein VC0629 [imported] -; E=6e-47 pir:F71727; acriflavin resistance protein D (acrD) RP170 - Rickettsia; E=3e-45 COG: VC0914; COG0841 Cation/multidrug efflux pump; E=1e-48 PFAM: PF00873; AcrB/AcrD/AcrF family; E=1.8e-14; multidrug resistance protein 2841692 1793884 RB5490 Rhodopirellula baltica SH 1 multidrug resistance protein NP_866730.1 2838414 R 243090 CDS NP_866731.1 32473737 1792419 complement(2841689..2843398) 1 NC_005027.1 best DB hits: BLAST: pir:A83342; conserved hypothetical protein PA2430 [imported] -; E=4e-07 swissprot:P32716; YJCR_ECOLI HYPOTHETICAL 36.9 KDA PROTEIN IN; E=2e-05 gb:AAG59280.1; AE005641_5 (AE005641) membrane protein; E=2e-05 COG: PA2430; COG1566 Multidrug resistance efflux pump; E=4e-08 HIN0311; COG0845 Membrane-fusion protein; E=0.002 PFAM: PF00529; HlyD family secretion protein; E=0.00042; multidrug resistance efflux pump 2843398 1792419 RB5495 Rhodopirellula baltica SH 1 multidrug resistance efflux pump NP_866731.1 2841689 R 243090 CDS NP_866732.1 32473738 1795663 2843397..2843672 1 NC_005027.1 hypothetical protein 2843672 1795663 RB5498 Rhodopirellula baltica SH 1 hypothetical protein NP_866732.1 2843397 D 243090 CDS NP_866733.1 32473739 1793834 complement(2843655..2844998) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB07052.1; (AP001518) BH3333~unknown conserved protein in; E=8e-21 embl:CAC10313.1; (AL442629) hypothetical protein SCH63.22c; E=0.76; hypothetical protein 2844998 1793834 RB5499 Rhodopirellula baltica SH 1 hypothetical protein NP_866733.1 2843655 R 243090 CDS NP_866734.1 32473740 1794879 complement(2845019..2845759) 1 NC_005027.1 PMID: 9665876 best DB hits: BLAST: swissprot:O83487; Y474_TREPA HYPOTHETICAL PROTEIN TP0474 -----; E=5e-54 swissprot:Q51423; Y964_PSEAE HYPOTHETICAL PROTEIN PA0964 -----; E=2e-53 swissprot:O67517; YF75_AQUAE HYPOTHETICAL PROTEIN AQ_1575 -----; E=5e-53 COG: TP0474; COG0217 Uncharacterized ACR; E=4e-55 PFAM: PF01709; Domain of unknown function DUF28; E=8e-105; hypothetical protein 2845759 1794879 RB5500 Rhodopirellula baltica SH 1 hypothetical protein NP_866734.1 2845019 R 243090 CDS NP_866735.1 32473741 1795460 complement(2845843..2847141) 1 NC_005027.1 hypothetical protein 2847141 1795460 RB5501 Rhodopirellula baltica SH 1 hypothetical protein NP_866735.1 2845843 R 243090 CDS NP_866736.1 32473742 1792818 2845859..2846293 1 NC_005027.1 hypothetical protein 2846293 1792818 RB5502 Rhodopirellula baltica SH 1 hypothetical protein NP_866736.1 2845859 D 243090 CDS NP_866737.1 32473743 1790096 complement(2847155..2847568) 1 NC_005027.1 PMID: 7535280 PMID: 9422595 best DB hits: BLAST: ddbj:BAB06130.1; (AP001515) ribosome-binding factor A [Bacillus; E=4e-13 swissprot:P32731; RBFA_BACSU RIBOSOME-BINDING FACTOR A (P15B; E=2e-11 swissprot:Q55625; RBFA_SYNY3 RIBOSOME-BINDING FACTOR A -----; E=2e-09 COG: BH2411; COG0858 Ribosome-binding factor A; E=4e-14 PFAM: PF02033; Ribosome-binding factor A; E=1.7e-28; ribosome-binding factor A 2847568 rbfA 1790096 rbfA Rhodopirellula baltica SH 1 ribosome-binding factor A NP_866737.1 2847155 R 243090 CDS NP_866738.1 32473744 1792889 complement(2847721..2850837) 1 NC_005027.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 2850837 infB 1792889 infB Rhodopirellula baltica SH 1 translation initiation factor IF-2 NP_866738.1 2847721 R 243090 CDS NP_866739.1 32473745 1794043 2850866..2851087 1 NC_005027.1 hypothetical protein 2851087 1794043 RB5505 Rhodopirellula baltica SH 1 hypothetical protein NP_866739.1 2850866 D 243090 CDS NP_866740.1 32473746 1792016 complement(2850947..2851102) 1 NC_005027.1 hypothetical protein 2851102 1792016 RB5506 Rhodopirellula baltica SH 1 hypothetical protein NP_866740.1 2850947 R 243090 CDS NP_866741.1 32473747 1791819 complement(2851099..2852595) 1 NC_005027.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 2852595 nusA 1791819 nusA Rhodopirellula baltica SH 1 transcription elongation factor NusA NP_866741.1 2851099 R 243090 CDS NP_866742.1 32473748 1795606 complement(2852546..2852710) 1 NC_005027.1 hypothetical protein 2852710 1795606 RB5508 Rhodopirellula baltica SH 1 hypothetical protein NP_866742.1 2852546 R 243090 CDS NP_866743.1 32473749 1790761 complement(2852723..2854117) 1 NC_005027.1 hypothetical protein 2854117 1790761 RB5509 Rhodopirellula baltica SH 1 hypothetical protein NP_866743.1 2852723 R 243090 CDS NP_866744.1 32473750 1794716 complement(2854114..2855727) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAA77335.1; (AB019494) IDN3 [Homo sapiens]; E=0.21 ddbj:BAA77349.1; (AB019602) IDN3-B [Homo sapiens]; E=0.21; hypothetical protein 2855727 1794716 RB5511 Rhodopirellula baltica SH 1 hypothetical protein NP_866744.1 2854114 R 243090 CDS NP_866745.1 32473751 1791842 complement(2855743..2857647) 1 NC_005027.1 PMID: 8407845 best DB hits: BLAST: gb:AAC70108.1; (AF074613) type II secretion protein [Escherichia; E=2e-06 swissprot:P34026; GSPK_XANCP GENERAL SECRETION PATHWAY PROTEIN K; E=5e-04 swissprot:P31706; GSPK_ERWCA GENERAL SECRETION PATHWAY PROTEIN K; E=0.002 COG: XF1523; COG3156 General secretion pathway protein K; E=2e-04; general secretion pathway protein K 2857647 gspK 1791842 gspK Rhodopirellula baltica SH 1 general secretion pathway protein K NP_866745.1 2855743 R 243090 CDS NP_866746.1 32473752 1792009 complement(2857532..2858641) 1 NC_005027.1 hypothetical protein 2858641 1792009 RB5514 Rhodopirellula baltica SH 1 hypothetical protein NP_866746.1 2857532 R 243090 CDS NP_866747.1 32473753 1794094 complement(2858616..2859134) 1 NC_005027.1 PMID: 12024217; signal peptide 2859134 1794094 RB5515 Rhodopirellula baltica SH 1 signal peptide NP_866747.1 2858616 R 243090 CDS NP_866748.1 32473754 1793511 complement(2859131..2859862) 1 NC_005027.1 best DB hits: PFAM: PF02501; Bacterial type II secretion system p; E=0.08; signal peptide 2859862 1793511 RB5516 Rhodopirellula baltica SH 1 signal peptide NP_866748.1 2859131 R 243090 CDS NP_866749.1 32473755 1791942 complement(2859868..2860344) 1 NC_005027.1 PMID: 1640836 PMID: 8407845 best DB hits: BLAST: pir:B70338; general secretion pathway protein G - Aquifex aeolicus; E=0.065 swissprot:P31733; GSPG_AERHY GENERAL SECRETION PATHWAY PROTEIN G; E=0.29 pir:B82670; general secretory pathway protein G precursor XF1519; E=0.83 COG: aq_418; COG2165 General secretory pathway proteins G and H and; E=0.006; general secretion pathway protein G 2860344 gspG 1791942 gspG Rhodopirellula baltica SH 1 general secretion pathway protein G NP_866749.1 2859868 R 243090 CDS NP_866750.1 32473756 1791218 complement(2860331..2860696) 1 NC_005027.1 hypothetical protein 2860696 1791218 RB5522 Rhodopirellula baltica SH 1 hypothetical protein NP_866750.1 2860331 R 243090 CDS NP_866751.1 32473757 1793702 complement(2860709..2860984) 1 NC_005027.1 hypothetical protein 2860984 1793702 RB5523 Rhodopirellula baltica SH 1 hypothetical protein NP_866751.1 2860709 R 243090 CDS NP_866752.1 32473758 1793510 2860924..2882595 1 NC_005027.1 PMID: 11759840 best DB hits: BLAST: embl:CAC19834.1; (AJ401093) hypothetical protein [Actinomyces; E=0.17; hypothetical protein 2882595 1793510 RB5524 Rhodopirellula baltica SH 1 hypothetical protein NP_866752.1 2860924 D 243090 CDS NP_866753.1 32473759 1792850 2882665..2883432 1 NC_005027.1 PMID: 8760912 best DB hits: BLAST: swissprot:P42981; YPJG_BACSU HYPOTHETICAL 24.8 KD PROTEIN IN; E=9e-17 ddbj:BAB05401.1; (AP001512) BH1682~unknown conserved protein; E=2e-15 gb:AAC14880.1; (AF060080) hypothetical protein [Chlorobium; E=6e-15 COG: BS_ypjG; COG2120 Uncharacterized proteins, LmbE homologs; E=9e-18 PFAM: PF02585; Uncharacterized LmbE-like protein, C; E=2.5e-20; hypothetical protein 2883432 1792850 RB5540 Rhodopirellula baltica SH 1 hypothetical protein NP_866753.1 2882665 D 243090 CDS NP_866754.1 32473760 1789907 complement(2883410..2883577) 1 NC_005027.1 hypothetical protein 2883577 1789907 RB5542 Rhodopirellula baltica SH 1 hypothetical protein NP_866754.1 2883410 R 243090 CDS NP_866755.1 32473761 1790997 2883586..2885625 1 NC_005027.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 2885625 metG 1790997 metG Rhodopirellula baltica SH 1 methionyl-tRNA synthetase NP_866755.1 2883586 D 243090 CDS NP_866756.1 32473762 1791971 complement(2885702..2886013) 1 NC_005027.1 hypothetical protein 2886013 1791971 RB5544 Rhodopirellula baltica SH 1 hypothetical protein NP_866756.1 2885702 R 243090 CDS NP_866757.1 32473763 1790898 complement(2885758..2886006) 1 NC_005027.1 hypothetical protein 2886006 1790898 RB5545 Rhodopirellula baltica SH 1 hypothetical protein NP_866757.1 2885758 R 243090 CDS NP_866758.1 32473764 1795746 2885978..2887570 1 NC_005027.1 hypothetical protein 2887570 1795746 RB5546 Rhodopirellula baltica SH 1 hypothetical protein NP_866758.1 2885978 D 243090 CDS NP_866759.1 32473765 1790028 complement(2887576..2888748) 1 NC_005027.1 hypothetical protein 2888748 1790028 RB5547 Rhodopirellula baltica SH 1 hypothetical protein NP_866759.1 2887576 R 243090 CDS NP_866760.1 32473766 1790701 2887747..2888790 1 NC_005027.1 hypothetical protein 2888790 1790701 RB5548 Rhodopirellula baltica SH 1 hypothetical protein NP_866760.1 2887747 D 243090 CDS NP_866761.1 32473767 1796603 2888747..2889034 1 NC_005027.1 hypothetical protein 2889034 1796603 RB5549 Rhodopirellula baltica SH 1 hypothetical protein NP_866761.1 2888747 D 243090 CDS NP_866762.1 32473768 1796494 2888787..2889104 1 NC_005027.1 hypothetical protein 2889104 1796494 RB5550 Rhodopirellula baltica SH 1 hypothetical protein NP_866762.1 2888787 D 243090 CDS NP_866763.1 32473769 1792940 2889101..2891092 1 NC_005027.1 hypothetical protein 2891092 1792940 RB5551 Rhodopirellula baltica SH 1 hypothetical protein NP_866763.1 2889101 D 243090 CDS NP_866764.1 32473770 1792838 2891141..2891305 1 NC_005027.1 hypothetical protein 2891305 1792838 RB5554 Rhodopirellula baltica SH 1 hypothetical protein NP_866764.1 2891141 D 243090 CDS NP_866765.1 32473771 1793355 2891274..2891438 1 NC_005027.1 hypothetical protein 2891438 1793355 RB5555 Rhodopirellula baltica SH 1 hypothetical protein NP_866765.1 2891274 D 243090 CDS NP_866766.1 32473772 1794907 2891491..2892735 1 NC_005027.1 PMID: 2549854 best DB hits: BLAST: pir:H69064; serinethreonine protein kinase related protein -; E=0.002 pir:T29127; hypothetical protein SC1F2.18 - Streptomyces coelicolor; E=0.015 gb:AAG57622.1; AE005480_9 (AE005480) dehydrogenase; E=0.63 COG: MTH1485; COG1520 Uncharacterized proteins of WD40-like repeat family; E=2e-04 PFAM: PF01011; PQQ enzyme repeat; E=0.49; dehydrogenase 2892735 1794907 RB5557 Rhodopirellula baltica SH 1 dehydrogenase NP_866766.1 2891491 D 243090 CDS NP_866767.1 32473773 1796008 2892853..2893341 1 NC_005027.1 signal peptide 2893341 1796008 RB5559 Rhodopirellula baltica SH 1 signal peptide NP_866767.1 2892853 D 243090 CDS NP_866768.1 32473774 1795027 2893360..2894241 1 NC_005027.1 PMID: 4863752 PMID: 7038627 best DB hits: BLAST: swissprot:P77960; TRPA_SYNY3 TRYPTOPHAN SYNTHASE ALPHA CHAIN; E=1e-45 swissprot:P11081; TRPA_PSEPU TRYPTOPHAN SYNTHASE ALPHA CHAIN; E=6e-43 swissprot:P07344; TRPA_PSEAE TRYPTOPHAN SYNTHASE ALPHA CHAIN; E=4e-42 COG: slr0966; COG0159 Tryptophan synthase alpha chain; E=1e-46 PFAM: PF00290; Tryptophan synthase alpha chain; E=3.2e-73; tryptophan synthase subunit alpha 2894241 trpA 1795027 trpA Rhodopirellula baltica SH 1 tryptophan synthase subunit alpha NP_866768.1 2893360 D 243090 CDS NP_866769.1 32473775 1796754 complement(2894212..2894349) 1 NC_005027.1 hypothetical protein 2894349 1796754 RB5561 Rhodopirellula baltica SH 1 hypothetical protein NP_866769.1 2894212 R 243090 CDS NP_866770.1 32473776 1793921 complement(2894328..2895203) 1 NC_005027.1 best DB hits: BLAST: gb:AAG37030.1; (AF288409) transcription elongation regulator; E=0.076 gb:AAK00309.1; AF315819_1 (AF315819) DNA-dependent RNA polymerase II; E=0.25 embl:CAA73326.1; (Y12790) Supt5h protein [Homo sapiens] -----; E=0.26; hypothetical protein 2895203 1793921 RB5562 Rhodopirellula baltica SH 1 hypothetical protein NP_866770.1 2894328 R 243090 CDS NP_866771.1 32473777 1797043 complement(2895383..2897569) 1 NC_005027.1 PMID: 8444796 best DB hits: BLAST: swissprot:P73437; FTH3_SYNY3 CELL DIVISION PROTEIN FTSH HOMOLOG 3; E=1e-129 pir:T31466; cell-division protein homolog ftsH - Heliobacillus; E=1e-127 pir:F83053; cell division protein FtsH PA4751 [imported] -; E=1e-123 COG: sll1463; COG0465 ATP-dependent Zn proteases; E=1e-130 PFAM: PF00158; Sigma-54 interaction domain; E=0.092 PF01057; Parvovirus non-structural pro; E=0.014 PF00910; RNA helicase; E=0.31; cell division protein FtsH 2897569 ftsH 1797043 ftsH Rhodopirellula baltica SH 1 cell division protein FtsH NP_866771.1 2895383 R 243090 CDS NP_866772.1 32473778 1796377 complement(2897566..2897766) 1 NC_005027.1 hypothetical protein 2897766 1796377 RB5567 Rhodopirellula baltica SH 1 hypothetical protein NP_866772.1 2897566 R 243090 CDS NP_866773.1 32473779 1794572 2897715..2899184 1 NC_005027.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2899184 dxr 1794572 dxr Rhodopirellula baltica SH 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase NP_866773.1 2897715 D 243090 CDS NP_866774.1 32473780 1792787 2899223..2901454 1 NC_005027.1 best DB hits: BLAST: pir:H81228; conserved hypothetical protein NMB0183 [imported] -; E=9e-16 pir:C82000; probable integral membrane protein NMA0084 [imported] -; E=1e-15 pir:C69881; conserved hypothetical protein yluC - Bacillus subtilis; E=7e-15 COG: NMB0183; COG0750 Predicted membrane-associated Zn-dependent; E=9e-17 HI0918; COG0750 Predicted membrane-associated Zn-dependent proteases; E=2e-15 yaeL; COG0750 Predicted membrane-associated Zn-dependent proteases 1; E=3e-13 PFAM: PF02163; Sterol-regulatory element bindi; E=0.03 PF00595; PDZ domain (Also known as DHR o; E=0.0064; metalloproteinase 2901454 1792787 RB5571 Rhodopirellula baltica SH 1 metalloproteinase NP_866774.1 2899223 D 243090 CDS NP_866775.1 32473781 1792280 complement(2901499..2901618) 1 NC_005027.1 hypothetical protein 2901618 1792280 RB5572 Rhodopirellula baltica SH 1 hypothetical protein NP_866775.1 2901499 R 243090 CDS NP_866776.1 32473782 1790624 2901640..2902539 1 NC_005027.1 best DB hits: BLAST: pir:E82830; conserved hypothetical protein XF0250 [imported] -; E=9e-18 gb:AAK02545.1; (AE006082) unknown [Pasteurella multocida]; E=2e-07 pir:B83243; hypothetical protein PA3222 [imported] - Pseudomonas; E=7e-04 COG: XF0250; COG0697 Predicted permeases; E=8e-19 PFAM: PF00892; Integral membrane protein DUF6; E=0.00013; permease 2902539 1790624 RB5573 Rhodopirellula baltica SH 1 permease NP_866776.1 2901640 D 243090 CDS NP_866777.1 32473783 1794727 2902618..2903553 1 NC_005027.1 best DB hits: BLAST: swissprot:Q50658; YN07_MYCTU HYPOTHETICAL 29.7 KDA PROTEIN RV2307C; E=0.002 COG: Rv2307c; COG1073 Hydrolases of the alpha/beta superfamily; E=2e-04; hydrolase 2903553 1794727 RB5575 Rhodopirellula baltica SH 1 hydrolase NP_866777.1 2902618 D 243090 CDS NP_866778.1 32473784 1795647 complement(2903665..2904753) 1 NC_005027.1 PMID: 1482681 best DB hits: BLAST: embl:CAB59581.1; (AL132662) possible gluconolactonase precursor; E=2e-30 swissprot:Q01578; GNL_ZYMMO GLUCONOLACTONASE PRECURSOR; E=2e-19 pir:B82698; gluconolactonase precursor XF1297 [imported] - Xylella; E=3e-19 COG: XF1297; COG3386 Uncharacterized protein; E=3e-20; gluconolactonase 2904753 gnl 1795647 gnl Rhodopirellula baltica SH 1 gluconolactonase NP_866778.1 2903665 R 243090 CDS NP_866779.1 32473785 1795726 complement(2904780..2905973) 1 NC_005027.1 best DB hits: BLAST: pir:A82381; conserved hypothetical protein VCA1077 [imported] -; E=8e-05 gb:AAD38234.1; (U17224) CarF [Pectobacterium carotovorum]; E=0.002 pir:H81703; conserved hypothetical protein TC0422 [imported] -; E=0.016 COG: VCA1077_2; COG1262 Uncharacterized BCR; E=8e-06; hypothetical protein 2905973 1795726 RB5581 Rhodopirellula baltica SH 1 hypothetical protein NP_866779.1 2904780 R 243090 CDS NP_866780.1 32473786 1795570 2906089..2906592 1 NC_005027.1 signal peptide 2906592 1795570 RB5584 Rhodopirellula baltica SH 1 signal peptide NP_866780.1 2906089 D 243090 CDS NP_866781.1 32473787 1791883 complement(2906633..2907235) 1 NC_005027.1 PMID: 12024217 best DB hits: BLAST: embl:CAB83107.1; (AJ276657) sigma factor 3 [Sinapis alba]; E=0.13 pir:B72234; RNA polymerase sigma-E factor - Thermotoga maritima; E=0.17 pir:S30404; hypothetical protein 3 - Streptomyces clavuligerus; E=0.21 PFAM: PF01046; NodD transcription activator c; E=0.2 PF00140; Sigma-70 factor; E=0.00055 PF00196; Bacterial regulatory proteins,; E=0.043; RNA polymerase sigma-E factor 2907235 1791883 RB5585 Rhodopirellula baltica SH 1 RNA polymerase sigma-E factor NP_866781.1 2906633 R 243090 CDS NP_866782.1 32473788 1790974 complement(2907345..2908004) 1 NC_005027.1 signal peptide 2908004 1790974 RB5587 Rhodopirellula baltica SH 1 signal peptide NP_866782.1 2907345 R 243090 CDS NP_866783.1 32473789 1792330 complement(2908531..2909037) 1 NC_005027.1 signal peptide 2909037 1792330 RB5590 Rhodopirellula baltica SH 1 signal peptide NP_866783.1 2908531 R 243090 CDS NP_866784.1 32473790 1793930 complement(2909182..2913054) 1 NC_005027.1 PMID: 7768349 best DB hits: BLAST: gb:AAF73695.1; (AE002226) serinethreonine-protein kinase; E=7e-39 pir:G71532; probable threoninetyrosine-specific protein kinase (EC; E=3e-38 pir:C72120; st protein kinase - Chlamydophila pneumoniae (strain; E=4e-37 COG: CT301_1; COG0515 Serine/threonine protein kinases; E=3e-39 PFAM: PF00069; Protein kinase domain; E=2.2e-27 PF00515; TPR Domain; E=0.89 PF02018; Cellulose binding domain; E=0.037; serine/threonine-protein kinase 2913054 1793930 RB5593 Rhodopirellula baltica SH 1 serine/threonine-protein kinase NP_866784.1 2909182 R 243090 CDS NP_866785.1 32473791 1790730 2913027..2913269 1 NC_005027.1 hypothetical protein 2913269 1790730 RB5595 Rhodopirellula baltica SH 1 hypothetical protein NP_866785.1 2913027 D 243090 CDS NP_866786.1 32473792 1795264 2913295..2913807 1 NC_005027.1 signal peptide 2913807 1795264 RB5597 Rhodopirellula baltica SH 1 signal peptide NP_866786.1 2913295 D 243090 CDS NP_866787.1 32473793 1796169 2913833..2914309 1 NC_005027.1 PMID: 3062174 best DB hits: BLAST: swissprot:O30723; HIS2_RHOCA PHOSPHORIBOSYL-ATP PYROPHOSPHATASE; E=2e-10 swissprot:P26722; HIS2_AZOBR PHOSPHORIBOSYL-ATP PYROPHOSPHATASE; E=6e-08 pir:D81178; phosphoribosyl-ATP cyclohydrolase NMB0603 [imported] -; E=8e-08 COG: NMB0603; COG0140 Phosphoribosyl-ATP pyrophosphohydrolase; E=8e-09 PFAM: PF01503; Phosphoribosyl-ATP pyrophosphohydrol; E=9.2e-30; phosphoribosyl-ATP pyrophosphatase 2914309 hisI 1796169 hisI Rhodopirellula baltica SH 1 phosphoribosyl-ATP pyrophosphatase NP_866787.1 2913833 D 243090 CDS NP_866788.1 32473794 1794172 2914405..2915304 1 NC_005027.1 PMID: 3062174 best DB hits: BLAST: swissprot:Q99145; HIS1_YARLI ATP PHOSPHORIBOSYLTRANSFERASE -----; E=2e-43 swissprot:P46586; HIS1_CANAL ATP PHOSPHORIBOSYLTRANSFERASE -----; E=6e-42 swissprot:O33256; HIS1_MYCTU ATP PHOSPHORIBOSYLTRANSFERASE -----; E=4e-41 COG: Rv2121c; COG0040 ATP phosphoribosyltransferase (histidine; E=4e-42 hisG; COG0040 ATP phosphoribosyltransferase (histidine biosynthesis); E=2e-36 VC1132; COG0040 ATP phosphoribosyltransferase (histidine; E=3e-34 PFAM: PF01634; ATP phosphoribosyltransferase; E=2e-56; ATP phosphoribosyltransferase 2915304 hisG 1794172 hisG Rhodopirellula baltica SH 1 ATP phosphoribosyltransferase NP_866788.1 2914405 D 243090 CDS NP_866789.1 32473795 1794812 2915323..2915454 1 NC_005027.1 hypothetical protein 2915454 1794812 RB5604 Rhodopirellula baltica SH 1 hypothetical protein NP_866789.1 2915323 D 243090 CDS NP_866790.1 32473796 1795212 complement(2915422..2915625) 1 NC_005027.1 hypothetical protein 2915625 1795212 RB5605 Rhodopirellula baltica SH 1 hypothetical protein NP_866790.1 2915422 R 243090 CDS NP_866791.1 32473797 1794721 complement(2915852..2918947) 1 NC_005027.1 PMID: 3007478 best DB hits: BLAST: swissprot:O26543; UVRA_METTH EXCINUCLEASE ABC SUBUNIT A -----; E=1e-178 ddbj:BAB07313.1; (AP001519) excinuclease ABC (subunit A) [Bacillus; E=1e-173 swissprot:Q9Z507; UVRA_STRCO EXCINUCLEASE ABC SUBUNIT A -----; E=1e-168 COG: MTH443; COG0178 Excinuclease ATPase subunit; E=1e-179 PFAM: PF00005; ABC transporter; E=0.0014 PF01583; Adenylylsulfate kinase; E=0.037 PF00485; Phosphoribulokinase / Uridine; E=0.54; excinuclease ABC subunit A 2918947 uvrA 1794721 uvrA Rhodopirellula baltica SH 1 excinuclease ABC subunit A NP_866791.1 2915852 R 243090 CDS NP_866792.1 32473798 1794616 2918941..2920320 1 NC_005027.1 best DB hits: BLAST: embl:CAB45032.1; (AL078635) large multi-functional; E=4e-32 embl:CAB58265.1; (AL121849) multi-domain protein; E=6e-30 pir:T36423; probable large, multifunctional secreted protein -; E=9e-05; large multi-functional protein 2920320 1794616 RB5608 Rhodopirellula baltica SH 1 large multi-functional protein NP_866792.1 2918941 D 243090 CDS NP_866793.1 32473799 1791043 2920380..2920733 1 NC_005027.1 hypothetical protein 2920733 1791043 RB5611 Rhodopirellula baltica SH 1 hypothetical protein NP_866793.1 2920380 D 243090 CDS NP_866794.1 32473800 1791444 2920721..2921521 1 NC_005027.1 signal peptide 2921521 1791444 RB5612 Rhodopirellula baltica SH 1 signal peptide NP_866794.1 2920721 D 243090 CDS NP_866795.1 32473801 1791637 2921546..2922628 1 NC_005027.1 best DB hits: BLAST: pir:B75319; conserved hypothetical protein - Deinococcus radiodurans; E=5e-47 gb:AAG55401.1; AE005281_4 (AE005281) orf, hypothetical protein; E=8e-17 swissprot:P75843; YCAQ_ECOLI HYPOTHETICAL 47.7 KDA PROTEIN IN; E=3e-16 COG: DR2072; COG3214 Uncharacterized BCR; E=5e-48; hypothetical protein 2922628 1791637 RB5613 Rhodopirellula baltica SH 1 hypothetical protein NP_866795.1 2921546 D 243090 CDS NP_866796.1 32473802 1794304 2922659..2923114 1 NC_005027.1 hypothetical protein 2923114 1794304 RB5614 Rhodopirellula baltica SH 1 hypothetical protein NP_866796.1 2922659 D 243090 CDS NP_866797.1 32473803 1791968 complement(2923193..2924320) 1 NC_005027.1 best DB hits: BLAST: pir:B75154; hypothetical protein PAB2408 - Pyrococcus abyssi (strain; E=0.21 PFAM: PF00515; TPR Domain; E=0.15; hypothetical protein 2924320 1791968 RB5615 Rhodopirellula baltica SH 1 hypothetical protein NP_866797.1 2923193 R 243090 CDS NP_866798.1 32473804 1796203 complement(2924378..2926477) 1 NC_005027.1 best DB hits: BLAST: pir:B69988; hypothetical protein ytaP - Bacillus subtilis -----; E=3e-15 ddbj:BAA81869.1; (AB026295) ESTs C19441(E10423),C99201(E10423); E=2e-08 pir:G82643; conserved hypothetical protein XF1745 [imported] -; E=0.12 PFAM: PF00969; Class II histocompatibility ant; E=0.17; hypothetical protein 2926477 1796203 RB5616 Rhodopirellula baltica SH 1 hypothetical protein NP_866798.1 2924378 R 243090 CDS NP_866799.1 32473805 1791551 complement(2926646..2927152) 1 NC_005027.1 best DB hits: BLAST: pir:D83595; hypothetical protein PA0398 [imported] - Pseudomonas; E=2e-40 gb:AAG45137.1; AF310895_3 (AF310895) unknown [Dictyostelium; E=5e-06 gb:AAF48683.1; (AE003504) CG9089 gene product [Drosophila; E=2e-05 COG: PA0398; COG2314 Predicted membrane protein; E=2e-41; hypothetical protein 2927152 1791551 RB5618 Rhodopirellula baltica SH 1 hypothetical protein NP_866799.1 2926646 R 243090 CDS NP_866800.1 32473806 1795747 complement(2927404..2928822) 1 NC_005027.1 best DB hits: BLAST: swissprot:P74120; ENGA_SYNY3 PROBABLE GTP-BINDING PROTEIN ENGA; E=7e-72 ddbj:BAA88823.1; (AB016077) phosphoglycerate dehydrogenase; E=1e-69 swissprot:P50743; ENGA_BACSU PROBABLE GTP-BINDING PROTEIN ENGA; E=6e-68 COG: slr1974; COG1160 Predicted GTPases; E=7e-73 PFAM: PF02263; Guanylate-binding protein, N-termina; E=0.84 PF01926; GTPase of unknown function; E=8.1e-11 PF02421; Ferrous iron transport protein B; E=1.4e-05; GTP-binding protein 2928822 1795747 RB5619 Rhodopirellula baltica SH 1 GTP-binding protein NP_866800.1 2927404 R 243090 CDS NP_866801.1 32473807 1792113 2928859..2929824 1 NC_005027.1 PMID: 1324872 best DB hits: BLAST: pir:E70446; N-terminus of phage SPO1 DNA polymerase - Aquifex; E=2e-28 pir:C71351; probable DNA polymerase, bacteriophage-type - syphilis; E=6e-26 pir:D75359; DNA polymerase-related protein - Deinococcus radiodurans; E=4e-24 COG: aq_1693; COG1573 Uracil-DNA glycosylase; E=2e-29; DNA polymerase 2929824 1792113 RB5620 Rhodopirellula baltica SH 1 DNA polymerase NP_866801.1 2928859 D 243090 CDS NP_866802.1 32473808 1796320 complement(2930011..2930538) 1 NC_005027.1 hypothetical protein 2930538 1796320 RB5622 Rhodopirellula baltica SH 1 hypothetical protein NP_866802.1 2930011 R 243090 CDS NP_866803.1 32473809 1796071 complement(2930972..2931154) 1 NC_005027.1 hypothetical protein 2931154 1796071 RB5625 Rhodopirellula baltica SH 1 hypothetical protein NP_866803.1 2930972 R 243090 CDS NP_866804.1 32473810 1794337 2931090..2933726 1 NC_005027.1 PMID: 1765107 best DB hits: BLAST: embl:CAC16707.1; (AL450289) metallopeptidase; E=2e-08 gb:AAB68919.1; (U00062) Aap1'p: argininealanine aminopeptidase; E=8e-05 swissprot:P32454; APE2_YEAST AMINOPEPTIDASE II (YSCII) -----; E=1e-04 COG: YHR047c; COG0308 Aminopeptidase N; E=8e-06; aminopeptidase 2933726 pepN 1794337 pepN Rhodopirellula baltica SH 1 aminopeptidase NP_866804.1 2931090 D 243090 CDS NP_866805.1 32473811 1794145 2933723..2934316 1 NC_005027.1 hypothetical protein 2934316 1794145 RB5629 Rhodopirellula baltica SH 1 hypothetical protein NP_866805.1 2933723 D 243090 CDS NP_866806.1 32473812 1794470 complement(2934370..2935218) 1 NC_005027.1 PMID: 9054507 best DB hits: BLAST: gb:AAF16005.1; AF187159_5 (AF187159) ParA [Streptomyces coelicolor; E=8e-52 pir:F70851; probable parB protein - Mycobacterium tuberculosis; E=9e-52 gb:AAC03484.1; (AF031590) Soj-like [Streptomyces coelicolor; E=2e-51 COG: Rv3918c; COG1192 ATPases involved in chromosome partitioning; E=9e-53 PFAM: PF00142; 4Fe-4S iron sulfur cluster bi; E=0.00074 PF02374; Anion-transporting ATPase; E=0.0047 PF01227; GTP cyclohydrolase I; E=0.52; partitioning or sporulation protein ParA 2935218 parA 1794470 parA Rhodopirellula baltica SH 1 partitioning or sporulation protein ParA NP_866806.1 2934370 R 243090 CDS NP_866807.1 32473813 1796743 2935243..2935548 1 NC_005027.1 hypothetical protein 2935548 1796743 RB5631 Rhodopirellula baltica SH 1 hypothetical protein NP_866807.1 2935243 D 243090 CDS NP_866808.1 32473814 1794484 2935709..2935858 1 NC_005027.1 hypothetical protein 2935858 1794484 RB5634 Rhodopirellula baltica SH 1 hypothetical protein NP_866808.1 2935709 D 243090 CDS NP_866809.1 32473815 1790241 complement(2935874..2936059) 1 NC_005027.1 best DB hits: PFAM: PF01587; Monocarboxylate transporter; E=0.39; hypothetical protein 2936059 1790241 RB5635 Rhodopirellula baltica SH 1 hypothetical protein NP_866809.1 2935874 R 243090 CDS NP_866810.1 32473816 1795751 2936058..2936810 1 NC_005027.1 best DB hits: BLAST: pir:A83457; conserved hypothetical protein PA1501 [imported] -; E=1e-11 gb:AAG59852.1; AF284750_1 (AF284750) HT036-ISO [Homo sapiens]; E=9e-10 swissprot:P36951; TRLC_DROME TRANSIENT RECEPTOR POTENTIAL LOCUS C; E=2e-09 COG: PA1501; COG1082 Predicted endonucleases; E=1e-12; sugar phosphate isomerase/epimerase 2936810 1795751 RB5637 Rhodopirellula baltica SH 1 sugar phosphate isomerase/epimerase NP_866810.1 2936058 D 243090 CDS NP_866811.1 32473817 1795202 2936814..2939162 1 NC_005027.1 PMID: 11337471 best DB hits: BLAST: gb:AAK05748.1; AE006395_8 (AE006395) UNKNOWN PROTEIN [Lactococcus; E=0.018 pir:G81786; Neisseria-specific antigen protein, TspA NMA2146; E=0.38 gb:AAF57761.1; (AE003801) CG5765 gene product [Drosophila; E=0.51 PFAM: PF00249; Myb-like DNA-binding domain; E=0.16; hypothetical protein 2939162 1795202 RB5638 Rhodopirellula baltica SH 1 hypothetical protein NP_866811.1 2936814 D 243090 CDS NP_866812.1 32473818 1791280 2939202..2940830 1 NC_005027.1 best DB hits: BLAST: pir:H81355; probable integral membrane protein Cj0832c [imported] -; E=2e-58 pir:D75220; hypothetical protein PAB2161 - Pyrococcus abyssi (strain; E=3e-54 pir:D71202; hypothetical protein PH1889 - Pyrococcus horikoshii; E=4e-52 COG: Cj0832c; COG1757 Na+/H+ antiporter; E=2e-59; integral membrane protein- Na+H+ antiporter 2940830 1791280 RB5641 Rhodopirellula baltica SH 1 integral membrane protein- Na+H+ antiporter NP_866812.1 2939202 D 243090 CDS NP_866813.1 32473819 1797013 2940969..2942018 1 NC_005027.1 PMID: 10440379 best DB hits: BLAST: swissprot:Q9WY63; FLIG_THEMA FLAGELLAR MOTOR SWITCH PROTEIN FLIG; E=3e-60 pir:G71328; probable flagellar motor switch protein (fliG-2) -; E=2e-57 swissprot:P23448; FLIG_BACSU FLAGELLAR MOTOR SWITCH PROTEIN FLIG; E=5e-57 COG: TM0220; COG1536 Flagellar motor switch protein; E=3e-61 PFAM: PF01706; FliG C-terminal domain; E=7.8e-45; flagellar motor switch protein fliG 2942018 fliG 1797013 fliG Rhodopirellula baltica SH 1 flagellar motor switch protein fliG NP_866813.1 2940969 D 243090 CDS NP_866814.1 32473820 1790558 complement(2942015..2942314) 1 NC_005027.1 hypothetical protein 2942314 1790558 RB5643 Rhodopirellula baltica SH 1 hypothetical protein NP_866814.1 2942015 R 243090 CDS NP_866815.1 32473821 1792349 complement(2942366..2943130) 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=6e-04 embl:CAB94634.1; (AL359215) secreted glycosyl hydrolase.; E=7e-04 embl:CAB45032.1; (AL078635) large multi-functional; E=0.055; secreted glycosyl hydrolase 2943130 1792349 RB5644 Rhodopirellula baltica SH 1 secreted glycosyl hydrolase NP_866815.1 2942366 R 243090 CDS NP_866816.1 32473822 1790657 complement(2943152..2944822) 1 NC_005027.1 PMID: 2180903 best DB hits: BLAST: embl:CAA73938.1; (Y13616) degP [Bradyrhizobium japonicum]; E=2e-23 gb:AAF87931.1; AF163841_10 (AF163841) serine protease; E=4e-22 swissprot:P54925; DEGP_BARHE PROBABLE PERIPLASMIC SERINE PROTEASE; E=7e-21 COG: slr1204; COG0265 Trypsin-like serine proteases, typically; E=1e-19 htrA; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=1e-18 BB0104; COG0265 Trypsin-like serine proteases, typically; E=2e-18 PFAM: PF00089; Trypsin; E=4.9e-10 PF00595; PDZ domain (Also known as DHR or GLG; E=0.0022; serine protease 2944822 1790657 RB5645 Rhodopirellula baltica SH 1 serine protease NP_866816.1 2943152 R 243090 CDS NP_866817.1 32473823 1791371 complement(2944831..2946567) 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: swissprot:P42349; YC42_SYNY3 HYPOTHETICAL METHYLTRANSFERASE; E=1e-58 swissprot:Q55914; Y309_SYNY3 HYPOTHETICAL METHYLTRANSFERASE; E=4e-27 pir:E72242; Mg-protoporphyrin IX monomethyl ester oxidative; E=3e-11 COG: sll1242; COG1032 Fe-S oxidoreductases family 2; E=9e-60 PFAM: PF00750; tRNA synthetases class I (R); E=0.67; methyltransferase 2946567 1791371 RB5647 Rhodopirellula baltica SH 1 methyltransferase NP_866817.1 2944831 R 243090 CDS NP_866818.1 32473824 1795275 2946605..2947117 1 NC_005027.1 hypothetical protein 2947117 1795275 RB5648 Rhodopirellula baltica SH 1 hypothetical protein NP_866818.1 2946605 D 243090 CDS NP_866819.1 32473825 1794462 complement(2946695..2947318) 1 NC_005027.1 hypothetical protein 2947318 1794462 RB5649 Rhodopirellula baltica SH 1 hypothetical protein NP_866819.1 2946695 R 243090 CDS NP_866820.1 32473826 1791254 complement(2947071..2947226) 1 NC_005027.1 hypothetical protein 2947226 1791254 RB5652 Rhodopirellula baltica SH 1 hypothetical protein NP_866820.1 2947071 R 243090 CDS NP_866821.1 32473827 1795454 complement(2947365..2948867) 1 NC_005027.1 PMID: 2643092 PMID: 3326786 best DB hits: BLAST: ddbj:BAA12742.1; (D85230) small subunit of NADH-dependent; E=1e-163 pir:T49818; probable glutamate synthase (NADPH) [imported] -; E=1e-162 pir:S74625; NADH-glutamate synthase small chain gltD - Synechocystis; E=1e-161 COG: sll1027; COG0493 NADPH-dependent glutamate synthase beta chain and; E=1e-162 PFAM: PF01494; FAD binding domain; E=0.013 PF02254; KTN NAD-binding domain; E=0.036 PF00984; UDP-glucose/GDP-mannose dehydr; E=0.28; NADH-glutamate synthase small chain 2948867 gltD 1795454 gltD Rhodopirellula baltica SH 1 NADH-glutamate synthase small chain NP_866821.1 2947365 R 243090 CDS NP_866822.1 32473828 1794810 complement(2949010..2953575) 1 NC_005027.1 PMID: 2643092 PMID: 3326786 best DB hits: BLAST: swissprot:Q06434; GLSF_ANTSP FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE; E=0.0 swissprot:P23225; GLSF_MAIZE FERREDOXIN-DEPENDENT GLUTAMATE; E=0.0 swissprot:Q03460; GLSN_MEDSA GLUTAMATE SYNTHASE [NADH], CHLOROPLAST; E=0.0 COG: sll1502_2; COG0069 Glutamate synthetase domain 2; E=0.0 sll1502_1; COG0067 Glutamate synthetase domain 1; E=1e-118 PFAM: PF01645; Conserved region in glutamate; E=5.5e-235 PF01493; Domain of unknown function DU; E=4.2e-95; glutamate synthase [NADPH] large chain 2953575 gltB 1794810 gltB Rhodopirellula baltica SH 1 glutamate synthase [NADPH] large chain NP_866822.1 2949010 R 243090 CDS NP_866823.1 32473829 1793755 complement(2953644..2954621) 1 NC_005027.1 PMID: 3413113 best DB hits: BLAST: swissprot:Q9X725; OXYR_ERWCH HYDROGEN PEROXIDE-INDUCIBLE GENES; E=1e-25 swissprot:P71318; OXYR_ERWCA HYDROGEN PEROXIDE-INDUCIBLE GENES; E=1e-25 swissprot:P44418; OXYR_HAEIN HYDROGEN PEROXIDE-INDUCIBLE GENES; E=3e-25 COG: HI0571; COG0583 Transcriptional regulator; E=2e-26 PFAM: PF00126; Bacterial regulatory helix-turn-heli; E=9.6e-37; transcriptional regulator 2954621 1793755 RB5655 Rhodopirellula baltica SH 1 transcriptional regulator NP_866823.1 2953644 R 243090 CDS NP_866824.1 32473830 1789957 complement(2954894..2955289) 1 NC_005027.1 best DB hits: BLAST: gb:AAB81983.1; (AF025662) unknown [Vibrio cholerae]; E=7e-18 ddbj:BAB02723.1; (AB022216) gene_id:MGD8.2~unknown protein; E=1e-11 pir:T09703; pop3 protein - western balsam poplar x cottonwood; E=5e-08; hypothetical protein 2955289 1789957 RB5657 Rhodopirellula baltica SH 1 hypothetical protein NP_866824.1 2954894 R 243090 CDS NP_866825.1 32473831 1792086 2955464..2956750 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 2956750 1792086 RB5660 Rhodopirellula baltica SH 1 signal peptide NP_866825.1 2955464 D 243090 CDS NP_866826.1 32473832 1792650 complement(2956834..2957940) 1 NC_005027.1 signal peptide 2957940 1792650 RB5663 Rhodopirellula baltica SH 1 signal peptide NP_866826.1 2956834 R 243090 CDS NP_866827.1 32473833 1795513 complement(2958146..2959264) 1 NC_005027.1 best DB hits: BLAST: gb:AAD04331.1; (AF062404) calpain [Drosophila melanogaster]; E=0.001 gb:AAF50189.1; (AE003550) CalpB gene product [Drosophila; E=0.001; calpain 2959264 1795513 RB5665 Rhodopirellula baltica SH 1 calpain NP_866827.1 2958146 R 243090 CDS NP_866828.1 32473834 1795533 complement(2959418..2959762) 1 NC_005027.1 PMID: 10622725 best DB hits: BLAST: pir:S76565; hypothetical protein - Synechocystis sp. (strain PCC; E=7e-14 pir:S76179; hypothetical protein - Synechocystis sp. (strain PCC; E=2e-12 ddbj:BAB06639.1; (AP001517) BH2920~unknown conserved protein; E=2e-12 COG: slr0192; COG0607 Rhodanese-related sulfurtransferases; E=7e-15 yceA; COG1054 Uncharacterized enzyme related to sulfurtransferases; E=4e-04 PFAM: PF00581; Rhodanese-like domain; E=4.2e-17; molybdopterin-synthase sulfurylase 2959762 moeB 1795533 moeB Rhodopirellula baltica SH 1 molybdopterin-synthase sulfurylase NP_866828.1 2959418 R 243090 CDS NP_866829.1 32473835 1791359 complement(2959877..2961988) 1 NC_005027.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 2961988 nadE 1791359 nadE Rhodopirellula baltica SH 1 NAD synthetase NP_866829.1 2959877 R 243090 CDS NP_866830.1 32473836 1791981 complement(2962174..2962887) 1 NC_005027.1 PMID: 9130712 best DB hits: BLAST: pir:A72340; serinethreonine protein phosphatase - Thermotoga; E=3e-30 gb:AAB68789.1; (U97022) orf; similar to serinethreonine protein; E=4e-26 gb:AAC46052.1; (U80887) serinethreonine protein phosphatase 1; E=1e-20 COG: TM0742; COG0639 Diadenosine tetraphosphatase and related; E=2e-31 PFAM: PF00149; Ser/Thr protein phosphatase; E=0.15; serine/threonine protein phosphatase 2962887 1791981 RB5674 Rhodopirellula baltica SH 1 serine/threonine protein phosphatase NP_866830.1 2962174 R 243090 CDS NP_866831.1 32473837 1792320 complement(2962888..2963667) 1 NC_005027.1 best DB hits: BLAST: embl:CAB72194.1; (AL138851) hypothetical protein SCE59.07c; E=3e-10 gb:AAG15555.1; (AY007523) AlgH [Pseudomonas fluorescens]; E=6e-06 pir:C83596; conserved hypothetical protein PA0405 [imported] -; E=6e-06 COG: PA0405; COG1678 transcriptional regulator; E=6e-07 PFAM: PF02622; Uncharacterized ACR, COG1678; E=4.1e-12; transcriptional regulator 2963667 1792320 RB5675 Rhodopirellula baltica SH 1 transcriptional regulator NP_866831.1 2962888 R 243090 CDS NP_866832.1 32473838 1790224 complement(2963664..2963807) 1 NC_005027.1 hypothetical protein 2963807 1790224 RB5676 Rhodopirellula baltica SH 1 hypothetical protein NP_866832.1 2963664 R 243090 CDS NP_866833.1 32473839 1792326 complement(2963826..2964836) 1 NC_005027.1 PMID: 1551888 PMID: 10593943 best DB hits: BLAST: pir:C81029; 3-oxoacyl-(acyl-carrier-protein) synthase III NMB1916; E=7e-41 gb:AAK04869.1; AE006310_11 (AE006310); E=1e-39 pir:H82633; beta-ketoacyl-[ACP] synthase III XF1817 [imported] -; E=3e-39 COG: NMB1916; COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III; E=7e-42 PFAM: PF02797; Chalcone and stilbene synthas; E=0.31; 3-oxoacyl-ACP synthase 2964836 fabH 1792326 fabH Rhodopirellula baltica SH 1 3-oxoacyl-ACP synthase NP_866833.1 2963826 R 243090 CDS NP_866834.1 32473840 1795814 2965080..2966843 1 NC_005027.1 PMID: 2211496 best DB hits: BLAST: gb:AAG30851.1; AF296129_1 (AF296129) trigger factor [Aquifex; E=4e-23 swissprot:O67358; TIG_AQUAE TRIGGER FACTOR (TF) ----- pir:; E=8e-23 swissprot:O53189; TIG_MYCTU TRIGGER FACTOR (TF) ----- pir:; E=1e-20 COG: aq_1340; COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase; E=7e-24 tig; COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger; E=5e-20 BS_tig; COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase; E=8e-20; trigger factor 2966843 tig 1795814 tig Rhodopirellula baltica SH 1 trigger factor NP_866834.1 2965080 D 243090 CDS NP_866835.1 32473841 1794219 complement(2966933..2967730) 1 NC_005027.1 PMID: 9389475 best DB hits: BLAST: gb:AAB89060.1; (AE000954) conserved hypothetical protein; E=7e-11 gb:AAD23399.1; AF110772_1 (AF110772) unknown [Streptomyces; E=1e-10 pir:G69054; conserved hypothetical protein MTH141 - Methanobacterium; E=1e-10 COG: AF2196; COG1891 Uncharacterized ArCR; E=7e-12; hypothetical protein 2967730 1794219 RB5685 Rhodopirellula baltica SH 1 hypothetical protein NP_866835.1 2966933 R 243090 CDS NP_866836.1 32473842 1794881 2967715..2969196 1 NC_005027.1 PMID: 3041371 best DB hits: BLAST: gb:AAG56793.1; AE005403_4 (AE005403) RNase D, processes tRNA; E=2e-32 pir:A83483; ribonuclease D PA1294 [imported] - Pseudomonas; E=3e-32 swissprot:P09155; RND_ECOLI RIBONUCLEASE D (RNASE D) -----; E=7e-32 COG: PA1294; COG0349 Ribonuclease D; E=3e-33 aq_1967; COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase; E=3e-08 PFAM: PF01612; 3'-5' exonuclease; E=2e-31 PF00570; HRDC domain; E=0.00016; ribonuclease D 2969196 rnd 1794881 rnd Rhodopirellula baltica SH 1 ribonuclease D NP_866836.1 2967715 D 243090 CDS NP_866837.1 32473843 1791215 complement(2969237..2970463) 1 NC_005027.1 best DB hits: BLAST: gb:AAF82144.1; AC034256_8 (AC034256) Contains similarity to F-box; E=3e-07 pir:T15864; hypothetical protein C56E6.6 - Caenorhabditis elegans; E=0.006 embl:CAB95333.1; (AL359782) possible adenylate cyclase; E=0.025; adenylate cyclase 2970463 1791215 RB5691 Rhodopirellula baltica SH 1 adenylate cyclase NP_866837.1 2969237 R 243090 CDS NP_866838.1 32473844 1791334 complement(2970400..2970624) 1 NC_005027.1 hypothetical protein 2970624 1791334 RB5693 Rhodopirellula baltica SH 1 hypothetical protein NP_866838.1 2970400 R 243090 CDS NP_866839.1 32473845 1790199 complement(2970632..2971417) 1 NC_005027.1 PMID: 8250549 best DB hits: BLAST: swissprot:P36572; BIOD_SERMA DETHIOBIOTIN SYNTHETASE (DETHIOBIOTIN; E=8e-20 swissprot:P53558; BIOD_BACSU DETHIOBIOTIN SYNTHETASE (DETHIOBIOTIN; E=1e-19 gb:AAG55149.1; AE005258_13 (AE005258) dethiobiotin synthetase; E=1e-18 COG: BS_bioD; COG0132 Dethiobiotin synthetase; E=1e-20 PFAM: PF01656; Cobyrinic acid a,c-diamide synthase; E=0.077; dethiobiotin synthetase 2971417 bioD 1790199 bioD Rhodopirellula baltica SH 1 dethiobiotin synthetase NP_866839.1 2970632 R 243090 CDS NP_866840.1 32473846 1794834 2971401..2972267 1 NC_005027.1 PMID: 8449931 best DB hits: BLAST: pir:H82556; beta-alanine synthetase XF2443 [imported] - Xylella; E=4e-78 pir:B81369; probable hydrolase Cj0947c [imported] - Campylobacter; E=2e-73 pir:F71901; hypothetical protein jhp0694 - Helicobacter pylori; E=2e-69 COG: XF2443; COG0388 Predicted amidohydrolase; E=4e-79 PFAM: PF00795; Carbon-nitrogen hydrolase; E=8.8e-98; beta-alanine synthetase 2972267 1794834 RB5695 Rhodopirellula baltica SH 1 beta-alanine synthetase NP_866840.1 2971401 D 243090 CDS NP_866841.1 32473847 1790714 complement(2972326..2973153) 1 NC_005027.1 PMID: 8002619 PMID: 10747806 best DB hits: BLAST: pir:F81092; extragenic suppressor protein SuhB NMB1347 [imported] -; E=3e-45 pir:B81848; inositol monophosphate family protein NMA1559 [imported]; E=1e-44 pir:C83169; extragenic suppressor protein SuhB PA3818 [imported] -; E=3e-42 COG: NMB1347; COG0483 Archaeal fructose-1,6-bisphosphatase and related; E=3e-46 PFAM: PF00459; Inositol monophosphatase; E=1.4e-70; inositol monophosphatase 2973153 suhB 1790714 suhB Rhodopirellula baltica SH 1 inositol monophosphatase NP_866841.1 2972326 R 243090 CDS NP_866842.1 32473848 1793465 2973214..2974596 1 NC_005027.1 PMID: 8384715 best DB hits: BLAST: swissprot:P14312; FIXW_RHILE FIXW PROTEIN ----- pir: JQ0313; E=3e-11 pir:C70314; thiol-disulfide interchange protein tlpA [imported] -; E=5e-06 ddbj:BAB05296.1; (AP001512) cytochrome c biogenesis (thioredoxin); E=6e-05 COG: aq_152; COG0526 Thiol-disulfide isomerase and thioredoxins; E=5e-07 PFAM: PF00085; Thioredoxin; E=1.9e-05; thiol-disulfide interchange protein 2974596 1793465 RB5697 Rhodopirellula baltica SH 1 thiol-disulfide interchange protein NP_866842.1 2973214 D 243090 CDS NP_866843.1 32473849 1791593 2974605..2975243 1 NC_005027.1 PMID: 11248100 best DB hits: BLAST: gb:AAK03963.1; (AE006225) unknown [Pasteurella multocida]; E=2e-13 pir:A82416; conserved hypothetical protein VCA0789 [imported] -; E=1e-12 swissprot:P39270; YJDF_ECOLI HYPOTHETICAL 23.4 KD PROTEIN IN; E=1e-07 PFAM: PF02177; Amyloid A4 extracellular domain; E=0.63; hypothetical protein 2975243 1791593 RB5699 Rhodopirellula baltica SH 1 hypothetical protein NP_866843.1 2974605 D 243090 CDS NP_866844.1 32473850 1791289 2975188..2978523 1 NC_005027.1 PMID: 3286606 best DB hits: BLAST: gb:AAG20509.1; (AE005123) glycolate oxidase subunit; GlcD; E=2e-48 gb:AAG20148.1; (AE005092) glycerol-3-phosphate dehydrogenase chain; E=5e-40 gb:AAG56674.1; AE005391_11 (AE005391) oxidase; E=2e-38 COG: VNG2422G_1; COG0277 FAD/FMN-containing dehydrogenases; E=2e-49 VNG2422G_2; COG0247 Fe-S oxidoreductases; E=7e-42 ydiJ_1; COG0277 FAD/FMN-containing dehydrogenases; E=5e-39 PFAM: PF01565; FAD binding domain; E=6.7e-40 PF02913; FAD linked oxidases, C-terminal; E=2.6e-14; oxidase 2978523 1791289 RB5701 Rhodopirellula baltica SH 1 oxidase NP_866844.1 2975188 D 243090 CDS NP_866845.1 32473851 1790913 2978520..2978780 1 NC_005027.1 PMID: 8514782 PMID: 10053003 best DB hits: BLAST: pir:G70920; probable MoaD involved in molybdopterin synthesis -; E=2e-05 ddbj:BAB06737.1; (AP001517) molybdopterin converting factor; E=3e-05 gb:AAD14600.1; (AF091872) molybdopterin-synthase small subunit; E=1e-04 COG: Rv3112; COG1977 Molybdopterin converting factor, small subunit; E=3e-06; molybdopterin converting factor, small subunit 2978780 moaD 1790913 moaD Rhodopirellula baltica SH 1 molybdopterin converting factor, small subunit NP_866845.1 2978520 D 243090 CDS NP_866846.1 32473852 1796215 2978777..2979289 1 NC_005027.1 PMID: 8361352 PMID: 8514782 best DB hits: BLAST: gb:AAF67478.1; AF155659_1 (AF155659) molybdenum cofactor; E=6e-15 embl:CAB71291.1; (AJ271728) molybdopterin synthase, large subunit; E=1e-14 pir:D70487; molybdopterin biosynthesis protein E chain [similarity]; E=1e-13 COG: aq_2181; COG0314 Molybdopterin converting factor, large subunit; E=1e-14 PFAM: PF02391; Molydopterin converting factor subun; E=7.2e-26; molybdopterin converting factor, large subunit 2979289 moaE 1796215 moaE Rhodopirellula baltica SH 1 molybdopterin converting factor, large subunit NP_866846.1 2978777 D 243090 CDS NP_866847.1 32473853 1791104 2979435..2979986 1 NC_005027.1 hypothetical protein 2979986 1791104 RB5707 Rhodopirellula baltica SH 1 hypothetical protein NP_866847.1 2979435 D 243090 CDS NP_866848.1 32473854 1795475 complement(2980028..2980579) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB07337.1; (AP001519) BH3618~unknown conserved protein in; E=5e-11 pir:C72419; conserved hypothetical protein - Thermotoga maritima; E=1e-08 pir:C71297; probable transmembrane protein - syphilis spirochete; E=5e-07 COG: BH3618; COG1699 Uncharacterized BCR; E=5e-12 PFAM: PF02623; Uncharacterized BCR, COG1699; E=5.7e-12; hypothetical protein 2980579 1795475 RB5708 Rhodopirellula baltica SH 1 hypothetical protein NP_866848.1 2980028 R 243090 CDS NP_866849.1 32473855 1794807 complement(2980700..2982655) 1 NC_005027.1 PMID: 8158647 PMID: 2193164 best DB hits: BLAST: swissprot:P29744; FLGL_ECOLI FLAGELLAR HOOK-ASSOCIATED PROTEIN 3; E=4e-08 gb:AAG55829.1; AE005318_6 (AE005318) flagellar biosynthesis; E=1e-07 swissprot:P16326; FLGL_SALTY FLAGELLAR HOOK-ASSOCIATED PROTEIN 3; E=3e-07 COG: flgL; COG1344 Flagellin and related hook-associated proteins; E=4e-09 PFAM: PF00669; Bacterial flagellin N-terminus; E=0.028; flagellar hook-associated protein 3 2982655 flgL 1794807 flgL Rhodopirellula baltica SH 1 flagellar hook-associated protein 3 NP_866849.1 2980700 R 243090 CDS NP_866850.1 32473856 1791163 complement(2982595..2982759) 1 NC_005027.1 hypothetical protein 2982759 1791163 RB5713 Rhodopirellula baltica SH 1 hypothetical protein NP_866850.1 2982595 R 243090 CDS NP_866851.1 32473857 1790249 2982826..2983458 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB69748.1; (AL137166) hypothetical protein SCC121.30c; E=0.009; hypothetical protein 2983458 1790249 RB5715 Rhodopirellula baltica SH 1 hypothetical protein NP_866851.1 2982826 D 243090 CDS NP_866852.1 32473858 1791158 complement(2983465..2983761) 1 NC_005027.1 best DB hits: BLAST: pir:T36788; hypothetical protein SCI30A.08 - Streptomyces; E=0.51 PFAM: PF02656; Domain of unknown function DUF; E=0.0074; hypothetical protein 2983761 1791158 RB5716 Rhodopirellula baltica SH 1 hypothetical protein NP_866852.1 2983465 R 243090 CDS NP_866853.1 32473859 1790897 complement(2983764..2985257) 1 NC_005027.1 catalyzes the conversion of NADPH to NADH; soluble pyridine nucleotide transhydrogenase 2985257 sthA 1790897 sthA Rhodopirellula baltica SH 1 soluble pyridine nucleotide transhydrogenase NP_866853.1 2983764 R 243090 CDS NP_866854.1 32473860 1791966 2985336..2986280 1 NC_005027.1 PMID: 7987228 best DB hits: BLAST: pir:C75051; hydrolase related PAB1449 - Pyrococcus abyssi (strain; E=5e-28 pir:C71109; hypothetical protein PH0642 - Pyrococcus horikoshii; E=7e-27 pir:B83387; hypothetical protein PA2074 [imported] - Pseudomonas; E=2e-22 COG: PAB1449; COG0388 Predicted amidohydrolase; E=5e-29 PFAM: PF00795; Carbon-nitrogen hydrolase; E=8e-48; amidohydrolase 2986280 1791966 RB5720 Rhodopirellula baltica SH 1 amidohydrolase NP_866854.1 2985336 D 243090 CDS NP_866855.1 32473861 1794518 complement(2986310..2987221) 1 NC_005027.1 PMID: 9371463 best DB hits: BLAST: pir:H69043; conserved hypothetical protein MTH1330 -; E=0.19 swissprot:Q50500; YE63_METTH HYPOTHETICAL PROTEIN MTH1463 (ORF11); E=0.30 pir:A55712; hypothetical protein X mtd 5'-region - Methanobacterium; E=0.39; hypothetical protein 2987221 1794518 RB5722 Rhodopirellula baltica SH 1 hypothetical protein NP_866855.1 2986310 R 243090 CDS NP_866856.1 32473862 1791199 complement(2987319..2987567) 1 NC_005027.1 hypothetical protein 2987567 1791199 RB5724 Rhodopirellula baltica SH 1 hypothetical protein NP_866856.1 2987319 R 243090 CDS NP_866857.1 32473863 1790661 2987529..2988269 1 NC_005027.1 PMID: 1624460 best DB hits: BLAST: swissprot:P28619; RNPH_BACSU RIBONUCLEASE PH (RNASE PH) (TRNA; E=2e-60 pir:A44914; tRNA nucleotidyltransferase (EC 2.7.7.56) - Bacillus; E=4e-60 pir:D82350; ribonuclease PH VC0210 [imported] - Vibrio cholerae; E=7e-60 COG: BS_rph; COG0689 RNase PH; E=2e-61 PA4740; COG1185 Polyribonucleotide nucleotidyltransferase; E=0.001 PFAM: PF01138; 3' exoribonuclease; E=4.3e-59; ribonuclease PH 2988269 rph 1790661 rph Rhodopirellula baltica SH 1 ribonuclease PH NP_866857.1 2987529 D 243090 CDS NP_866858.1 32473864 1790272 2988285..2989502 1 NC_005027.1 best DB hits: BLAST: gb:AAD41367.1; AF151698_4 (AF151698) oxidoreductase; E=9e-09 pir:H69216; 3-chlorobenzoate-3,4-dioxygenase dyhydrogenase related; E=1e-08 pir:T38428; hypothetical oxidoreductase - fission yeast; E=5e-08 COG: MTH875; COG0673 Predicted dehydrogenases and related proteins; E=9e-10 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=9.2e-22; oxidoreductase 2989502 1790272 RB5727 Rhodopirellula baltica SH 1 oxidoreductase NP_866858.1 2988285 D 243090 CDS NP_866859.1 32473865 1793290 2989469..2990419 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: swissprot:P73846; YH17_SYNY3 HYPOTHETICAL 30.2 KD PROTEIN SLR1717; E=1e-37 gb:AAB89691.1; (AE000995) conserved hypothetical protein; E=3e-28 pir:C72312; conserved hypothetical protein - Thermotoga maritima; E=7e-28 COG: slr1717; COG1606 ATP-utilizing enzymes of the PP-loop superfamily; E=1e-38 PFAM: PF00764; Arginosuccinate synthase; E=0.042; ATP-utilizing enzyme 2990419 1793290 RB5730 Rhodopirellula baltica SH 1 ATP-utilizing enzyme NP_866859.1 2989469 D 243090 CDS NP_866860.1 32473866 1792711 2990416..2992047 1 NC_005027.1 PMID: 7768349 best DB hits: BLAST: pir:T36501; probable serinethreonine protein kinase - Streptomyces; E=3e-47 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=4e-46 swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=2e-45 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=4e-47 PFAM: PF00069; Protein kinase domain; E=2.8e-44; serine/threonine protein kinase 2992047 1792711 RB5731 Rhodopirellula baltica SH 1 serine/threonine protein kinase NP_866860.1 2990416 D 243090 CDS NP_866861.1 32473867 1795636 complement(2992114..2992512) 1 NC_005027.1 hypothetical protein 2992512 1795636 RB5732 Rhodopirellula baltica SH 1 hypothetical protein NP_866861.1 2992114 R 243090 CDS NP_866862.1 32473868 1796248 complement(2992454..2992648) 1 NC_005027.1 hypothetical protein 2992648 1796248 RB5733 Rhodopirellula baltica SH 1 hypothetical protein NP_866862.1 2992454 R 243090 CDS NP_866863.1 32473869 1792114 2992771..2993634 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S75932; hypothetical protein - Synechocystis sp. (strain PCC; E=1e-35 pir:B83298; conserved hypothetical protein PA2771 [imported] -; E=7e-07 pir:S76731; hypothetical protein - Synechocystis sp. (strain PCC; E=9e-06 COG: sll0048_1; COG2203 GAF domain; E=2e-27 PFAM: PF01590; GAF domain; E=2.5e-09; hypothetical protein 2993634 1792114 RB5734 Rhodopirellula baltica SH 1 hypothetical protein NP_866863.1 2992771 D 243090 CDS NP_866864.1 32473870 1796190 complement(2993690..2994466) 1 NC_005027.1 PMID: 1569007 best DB hits: BLAST: swissprot:P10940; UHPA_ECOLI transcriptional regulator; E=0.020 embl:CAB37412.1; (AJ224978) TtrR [Salmonella typhimurium] -----; E=0.075 swissprot:P27667; UHPA_SALTY transcriptional regulator; E=0.12 COG: uhpA; COG2197 Response regulators consisting of a CheY-like receiver; E=0.002; transcriptional regulator 2994466 1796190 RB5736 Rhodopirellula baltica SH 1 transcriptional regulator NP_866864.1 2993690 R 243090 CDS NP_866865.1 32473871 1795742 2994415..2994777 1 NC_005027.1 hypothetical protein 2994777 1795742 RB5737 Rhodopirellula baltica SH 1 hypothetical protein NP_866865.1 2994415 D 243090 CDS NP_866866.1 32473872 1793021 complement(2994894..2995667) 1 NC_005027.1 PMID: 3897211 best DB hits: BLAST: swissprot:Q58414; ILVE_METJA BRANCHED-CHAIN AMINO ACID; E=3e-07 gb:AAB90305.1; (AE001039) branched-chain amino acid; E=2e-05 pir:F69057; branched-chain amino-acid aminotransferase -; E=6e-05 COG: MJ1008; COG0115 Branched-chain amino acid; E=3e-08; branched-chain amino acid aminotransferase 2995667 ilvE 1793021 ilvE Rhodopirellula baltica SH 1 branched-chain amino acid aminotransferase NP_866866.1 2994894 R 243090 CDS NP_866867.1 32473873 1790627 complement(2995817..2996944) 1 NC_005027.1 PMID: 11259647 best DB hits: PFAM: PF00487; Fatty acid desaturase; E=0.11; hypothetical protein 2996944 1790627 RB5740 Rhodopirellula baltica SH 1 hypothetical protein NP_866867.1 2995817 R 243090 CDS NP_866868.1 32473874 1795353 complement(2997006..2997176) 1 NC_005027.1 hypothetical protein 2997176 1795353 RB5742 Rhodopirellula baltica SH 1 hypothetical protein NP_866868.1 2997006 R 243090 CDS NP_866869.1 32473875 1795519 2997165..2998460 1 NC_005027.1 PMID: 9387221 best DB hits: BLAST: gb:AAC00390.1; (AF008220) YtfP [Bacillus subtilis]; E=2e-57 ddbj:BAB06998.1; (AP001518) BH3279~unknown conserved protein; E=5e-53 gb:AAK04356.1; AE006263_3 (AE006263) HYPOTHETICAL PROTEIN; E=3e-46 COG: BH3279; COG2081 Predicted flavoproteins; E=5e-54 PFAM: PF01134; Glucose inhibited division prot; E=0.38 PF01494; FAD binding domain; E=0.002 PF01946; Thi4 family; E=0.25; flavoprotein 2998460 1795519 RB5743 Rhodopirellula baltica SH 1 flavoprotein NP_866869.1 2997165 D 243090 CDS NP_866870.1 32473876 1795686 2998532..3000640 1 NC_005027.1 PMID: 1970565 best DB hits: BLAST: swissprot:P40137; CYAA_STIAU ADENYLATE CYCLASE 1 (ATP; E=9e-11 swissprot:P19485; CYA1_RHIME ADENYLATE CYCLASE 1 (ATP; E=2e-10 pir:C71320; probable adenylate cyclase - syphilis spirochete -----; E=3e-10 COG: TP0485; COG2114 Adenylate cyclase, family 3 (some proteins contain; E=2e-11 PFAM: PF00498; FHA domain; E=0.61 PF00211; Adenylate and Guanylate cyclase; E=1.1e-07; adenylate cyclase 3000640 cya 1795686 cya Rhodopirellula baltica SH 1 adenylate cyclase NP_866870.1 2998532 D 243090 CDS NP_866871.1 32473877 1792076 complement(3000842..3001234) 1 NC_005027.1 hypothetical protein 3001234 1792076 RB5745 Rhodopirellula baltica SH 1 hypothetical protein NP_866871.1 3000842 R 243090 CDS NP_866872.1 32473878 1794533 complement(3001359..3003374) 1 NC_005027.1 PMID: 2668891 best DB hits: BLAST: pir:G82121; arginyl-tRNA synthetase VC2074 [imported] - Vibrio; E=1e-69 swissprot:Q55486; SYR_SYNY3 ARGINYL-TRNA SYNTHETASE; E=5e-68 embl:CAC01600.1; (AJ269505) arginyl-tRNA synthetase; E=4e-66 COG: VC2074; COG0018 Arginyl-tRNA synthetase; E=1e-70 PFAM: PF00750; tRNA synthetases class I (R); E=5.7e-55; arginyl-tRNA synthetase 3003374 argS 1794533 argS Rhodopirellula baltica SH 1 arginyl-tRNA synthetase NP_866872.1 3001359 R 243090 CDS NP_866873.1 32473879 1794795 complement(3003437..3004000) 1 NC_005027.1 PMID: 10192928 best DB hits: BLAST: ddbj:BAB05047.1; (AP001511) BH1328~unknown conserved protein; E=1e-12 pir:S77145; ybeB protein homolog iojap - Synechocystis sp. (strain; E=2e-12 pir:E75256; conserved hypothetical protein - Deinococcus radiodurans; E=3e-11 COG: BH1328; COG0799 Uncharacterized ACR (homolog of plant Iojap; E=1e-13 CT769; COG0799 Uncharacterized ACR (homolog of plant Iojap proteins); E=1e-09 TM0147; COG0799 Uncharacterized ACR (homolog of plant Iojap; E=2e-09 PFAM: PF02410; Domain of unknown function DUF143; E=3.3e-30; hypothetical protein 3004000 1794795 RB5749 Rhodopirellula baltica SH 1 hypothetical protein NP_866873.1 3003437 R 243090 CDS NP_866874.1 32473880 1792917 3004163..3004645 1 NC_005027.1 PMID: 9537378 best DB hits: BLAST: ddbj:BAB04667.1; (AP001510) bacterioferritin comigratory protein; E=2e-27 pir:F70870; probable bcp protein - Mycobacterium tuberculosis; E=2e-27 pir:A83520; bacterioferritin comigratory protein PA1008 [imported] -; E=8e-26 COG: BH0948; COG1225 Peroxiredoxins; E=2e-28 PFAM: PF00578; AhpC/TSA family; E=4.7e-35; bacterioferritin comigratory protein 3004645 1792917 RB5753 Rhodopirellula baltica SH 1 bacterioferritin comigratory protein NP_866874.1 3004163 D 243090 CDS NP_866875.1 32473881 1792945 3004578..3006515 1 NC_005027.1 best DB hits: BLAST: pir:F82206; DnaK-related protein VC1374 [imported] - Vibrio cholerae; E=1e-110 pir:E82206; DnaK-related protein VC1373 [imported] - Vibrio cholerae; E=2e-75 pir:C72385; dnaK-type molecular chaperone dnaK - Thermotoga maritima; E=4e-07 COG: VC1374; COG0443 Molecular chaperone; E=1e-111 PFAM: PF00370; FGGY family of carbohydrate kinases,; E=0.8 PF00012; Hsp70 protein; E=5.8e-06; molecular chaperone DnaK 3006515 dnaK 1792945 dnaK Rhodopirellula baltica SH 1 molecular chaperone DnaK NP_866875.1 3004578 D 243090 CDS NP_866876.1 32473882 1791347 3006427..3009393 1 NC_005027.1 PMID: 2345134 best DB hits: BLAST: pir:E82206; DnaK-related protein VC1373 [imported] - Vibrio cholerae; E=1e-142 pir:F82206; DnaK-related protein VC1374 [imported] - Vibrio cholerae; E=3e-88 swissprot:Q51382; HSCA_PSEAE CHAPERONE PROTEIN HSCA HOMOLOG; E=4e-08 COG: VC1373_1; COG0443 Molecular chaperone; E=1e-99 PFAM: PF00012; Hsp70 protein; E=0.0012; molecular chaperone DnaK 3009393 dnaK 1791347 dnaK Rhodopirellula baltica SH 1 molecular chaperone DnaK NP_866876.1 3006427 D 243090 CDS NP_866877.1 32473883 1792788 3009494..3013483 1 NC_005027.1 hypothetical protein 3013483 1792788 RB5756 Rhodopirellula baltica SH 1 hypothetical protein NP_866877.1 3009494 D 243090 CDS NP_866878.1 32473884 1796942 complement(3013477..3014379) 1 NC_005027.1 PMID: 9278503 best DB hits: BLAST: swissprot:Q46931; YGDQ_ECOLI HYPOTHETICAL 26.2 KD PROTEIN IN; E=2e-31 gb:AAF12561.1; AE001826_30 (AE001826) conserved hypothetical; E=5e-31 swissprot:P43932; YGDQ_HAEIN HYPOTHETICAL PROTEIN HI0056 -----; E=7e-30 COG: ygdQ; COG0861 Membrane protein TerC, possibly involved in tellurium; E=2e-32 DRB0131; COG0861 Membrane protein TerC, possibly involved in; E=5e-32; hypothetical protein 3014379 1796942 RB5758 Rhodopirellula baltica SH 1 hypothetical protein NP_866878.1 3013477 R 243090 CDS NP_866879.1 32473885 1794524 complement(3014426..3015202) 1 NC_005027.1 best DB hits: PFAM: PF01925; Domain of unknown function DUF81; E=0.54; hypothetical protein 3015202 1794524 RB5761 Rhodopirellula baltica SH 1 hypothetical protein NP_866879.1 3014426 R 243090 CDS NP_866880.1 32473886 1790168 complement(3015199..3015612) 1 NC_005027.1 PMID: 8760912 best DB hits: BLAST: swissprot:P42979; YPJD_BACSU HYPOTHETICAL 13.0 KD PROTEIN IN; E=8e-10 pir:H75445; conserved hypothetical protein - Deinococcus radiodurans; E=5e-09 ddbj:BAB05398.1; (AP001512) BH1679~unknown conserved protein; E=1e-08 COG: BS_ypjD; COG1694 Predicted pyrophosphatase; E=9e-11 PFAM: PF01503; Phosphoribosyl-ATP pyrophosphohydrol; E=0.23; pyrophosphatase 3015612 1790168 RB5762 Rhodopirellula baltica SH 1 pyrophosphatase NP_866880.1 3015199 R 243090 CDS NP_866881.1 32473887 1791548 complement(3015609..3016823) 1 NC_005027.1 PMID: 11481431 best DB hits: BLAST: embl:CAC18704.1; (AL451182) hypothetical protein [Streptomyces; E=0.12; signal peptide 3016823 1791548 RB5763 Rhodopirellula baltica SH 1 signal peptide NP_866881.1 3015609 R 243090 CDS NP_866882.1 32473888 1794983 complement(3016868..3018265) 1 NC_005027.1 PMID: 6265208 best DB hits: BLAST: pir:S74826; NADH dehydrogenase (EC 1.6.99.3) - Synechocystis sp.; E=1e-110 embl:CAA71031.1; (Y09899) NADH dehydrogenase [Calothrix; E=1e-106 gb:AAC46302.1; (AF038423) NADH dehydrogenase [Mycobacterium; E=9e-91 COG: slr0851; COG1252 NADH dehydrogenase, FAD-containing subunit; E=1e-111 PFAM: PF01494; FAD binding domain; E=0.015 PF00732; GMC oxidoreductases; E=0.067 PF00070; Pyridine nucleotide-disulphide; E=7.9e-33; NADH dehydrogenase 3018265 ndh 1794983 ndh Rhodopirellula baltica SH 1 NADH dehydrogenase NP_866882.1 3016868 R 243090 CDS NP_866883.1 32473889 1794253 complement(3018371..3021940) 1 NC_005027.1 PMID: 10202137 best DB hits: BLAST: swissprot:P77338; KEFA_ECOLI POTASSIUM EFFLUX SYSTEM KEFA (AEFA; E=3e-55 gb:AAK02442.1; (AE006072) unknown [Pasteurella multocida]; E=1e-52 swissprot:Q57362; YJEP_HAEIN PROTEIN HI0195.1 PRECURSOR -----; E=9e-49 COG: aefA; COG3264 Small-conductance mechanosensitive channel; E=3e-56 slr0510_1; COG0668 Small-conductance mechanosensitive channel; E=1e-18 PFAM: PF00924; Uncharacterized protein family UPF0; E=1.4e-66; potassium efflux system KefA 3021940 kefA 1794253 kefA Rhodopirellula baltica SH 1 potassium efflux system KefA NP_866883.1 3018371 R 243090 CDS NP_866884.1 32473890 1791841 3021969..3022139 1 NC_005027.1 hypothetical protein 3022139 1791841 RB5771 Rhodopirellula baltica SH 1 hypothetical protein NP_866884.1 3021969 D 243090 CDS NP_866885.1 32473891 1790734 3022129..3023556 1 NC_005027.1 hypothetical protein 3023556 1790734 RB5772 Rhodopirellula baltica SH 1 hypothetical protein NP_866885.1 3022129 D 243090 CDS NP_866886.1 32473892 1793030 3023580..3025166 1 NC_005027.1 PMID: 9389475 best DB hits: BLAST: gb:AAB90372.1; (AE001044) conserved hypothetical protein; E=5e-45 pir:E72265; conserved hypothetical protein - Thermotoga maritima; E=3e-44 embl:CAC23290.1; (AL512965) conserved hypothetical protein; E=1e-39 COG: AF0862; COG1690 Uncharacterized ACR; E=5e-46 PFAM: PF01139; Uncharacterized protein family; E=0.00068; hypothetical protein 3025166 1793030 RB5774 Rhodopirellula baltica SH 1 hypothetical protein NP_866886.1 3023580 D 243090 CDS NP_866887.1 32473893 1791299 complement(3025207..3026163) 1 NC_005027.1 PMID: 10086842 best DB hits: BLAST: pir:B72359; lipopolysaccharide biosynthesis protein BplA -; E=3e-27 ddbj:BAB07562.1; (AP001520) oxidoreductase [Bacillus halodurans]; E=5e-26 ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=3e-23 COG: TM0585; COG0673 Predicted dehydrogenases and related proteins; E=3e-28 PFAM: PF01408; Oxidoreductase, NAD-bin; E=7.5e-40 PF02894; Oxidoreductase, C-termi; E=2.8e-10; NADH-dependent dehydrogenase 3026163 1791299 RB5776 Rhodopirellula baltica SH 1 NADH-dependent dehydrogenase NP_866887.1 3025207 R 243090 CDS NP_866888.1 32473894 1795320 3026126..3026287 1 NC_005027.1 hypothetical protein 3026287 1795320 RB5777 Rhodopirellula baltica SH 1 hypothetical protein NP_866888.1 3026126 D 243090 CDS NP_866889.1 32473895 1796299 complement(3026289..3028175) 1 NC_005027.1 PMID: 8454193 PMID: 3537962 PMID: 7022451 best DB hits: BLAST: swissprot:P35483; PPBH_PSEAE ALKALINE PHOSPHATASE H PRECURSOR; E=2e-11 pdb:1ANI; A Chain A, Alkaline Phosphatase (D153h, K328h) -----; E=2e-11 pdb:2ANH; A Chain A, Alkaline Phosphatase (D153h) ----- pdb:; E=3e-11 COG: PA3296; COG1785 Alkaline phosphatase; E=2e-12 PFAM: PF00245; Alkaline phosphatase; E=2.2e-09; alkaline phosphatase 3028175 phoA 1796299 phoA Rhodopirellula baltica SH 1 alkaline phosphatase NP_866889.1 3026289 R 243090 CDS NP_866890.1 32473896 1791613 3028410..3028973 1 NC_005027.1 hypothetical protein 3028973 1791613 RB5779 Rhodopirellula baltica SH 1 hypothetical protein NP_866890.1 3028410 D 243090 CDS NP_866891.1 32473897 1793394 3028975..3029472 1 NC_005027.1 PMID: 7699720 best DB hits: BLAST: pir:D75276; response regulator - Deinococcus radiodurans (strain R1); E=2e-09 embl:CAB62661.1; (AL133422) hypothetical protein SCM1.03c.; E=4e-08 swissprot:Q55169; RCP1_SYNY3 RESPONSE REGULATOR RCP1 -----; E=4e-08 COG: DR2420; COG0784 CheY-like receiver domains; E=2e-10 VC0790; COG2197 Response regulators consisting of a CheY-like; E=0.002 citB; COG2197 Response regulators consisting of a CheY-like receiver; E=0.004 PFAM: PF00072; Response regulator receiver doma; E=2.1e-10; response regulator 3029472 1793394 RB5780 Rhodopirellula baltica SH 1 response regulator NP_866891.1 3028975 D 243090 CDS NP_866892.1 32473898 1795401 complement(3029469..3030296) 1 NC_005027.1 hypothetical protein 3030296 1795401 RB5781 Rhodopirellula baltica SH 1 hypothetical protein NP_866892.1 3029469 R 243090 CDS NP_866893.1 32473899 1793197 complement(3030299..3031819) 1 NC_005027.1 PMID: 9388228 best DB hits: BLAST: swissprot:P56430; THIO_HELPY THIOREDOXIN (TRX) ----- pir:; E=1e-06 swissprot:P80579; THIO_ALIAC THIOREDOXIN (TRX) ----- pdb: 1QUW; E=5e-06 pir:G75612; thioredoxin 1 - Deinococcus radiodurans (strain R1); E=1e-05 COG: jhp0763; COG0526 Thiol-disulfide isomerase and thioredoxins; E=1e-07 PA4061; COG3118 Thioredoxin domain-containing protein; E=2e-06 Cj0147c; COG0526 Thiol-disulfide isomerase and thioredoxins; E=6e-06 PFAM: PF00085; Thioredoxin; E=0.00016; thioredoxin 3031819 trx 1793197 trx Rhodopirellula baltica SH 1 thioredoxin NP_866893.1 3030299 R 243090 CDS NP_866894.1 32473900 1793870 complement(3031853..3032074) 1 NC_005027.1 hypothetical protein 3032074 1793870 RB5785 Rhodopirellula baltica SH 1 hypothetical protein NP_866894.1 3031853 R 243090 CDS NP_866895.1 32473901 1793070 complement(3032121..3033506) 1 NC_005027.1 PMID: 9482716 best DB hits: BLAST: pir:B69196; conserved hypothetical protein MTH72 - Methanobacterium; E=7e-20 pir:F69210; conserved hypothetical protein MTH83 - Methanobacterium; E=3e-15 pir:S74665; outer membrane protein mom72, 72K - Synechocystis sp.; E=2e-13 COG: MTH72; COG0457 TPR-repeat-containing proteins; E=7e-21 PFAM: PF00515; TPR Domain; E=0.12; TPR repeat-containing protein 3033506 1793070 RB5786 Rhodopirellula baltica SH 1 TPR repeat-containing protein NP_866895.1 3032121 R 243090 CDS NP_866896.1 32473902 1790753 complement(3033490..3033933) 1 NC_005027.1 PMID: 9180694 best DB hits: BLAST: pir:T14312; hypothetical protein - carrot transposon Tdc1 -----; E=0.54; hypothetical protein 3033933 1790753 RB5787 Rhodopirellula baltica SH 1 hypothetical protein NP_866896.1 3033490 R 243090 CDS NP_866897.1 32473903 1793185 3034000..3035802 1 NC_005027.1 PMID: 2185975 best DB hits: BLAST: gb:AAF53358.1; (AE003641) CG16885 gene product [Drosophila; E=0.40; ferredoxin 3035802 1793185 RB5788 Rhodopirellula baltica SH 1 ferredoxin NP_866897.1 3034000 D 243090 CDS NP_866898.1 32473904 1790466 complement(3035774..3035920) 1 NC_005027.1 hypothetical protein 3035920 1790466 RB5793 Rhodopirellula baltica SH 1 hypothetical protein NP_866898.1 3035774 R 243090 CDS NP_866899.1 32473905 1794431 complement(3036089..3036955) 1 NC_005027.1 hypothetical protein 3036955 1794431 RB5794 Rhodopirellula baltica SH 1 hypothetical protein NP_866899.1 3036089 R 243090 CDS NP_866900.1 32473906 1793072 complement(3036936..3037643) 1 NC_005027.1 PMID: 7876255 best DB hits: BLAST: pir:A82153; PTS system, fructose-specific IIABC component VC1822; E=7e-05 ddbj:BAB03332.1; (AB035450) fructose specific permease; E=2e-04 pir:E82153; PTS system, fructose-specific IIABC component VC1826; E=0.001 COG: VC1822_1; COG1762 Phosphotransferase system; E=6e-06 CT290; COG1762 Phosphotransferase system mannitol/fructose-specific; E=1e-04 BH0828_1; COG1762 Phosphotransferase system; E=4e-04 PFAM: PF00359; Phosphoenolpyruvate-dependent sug; E=0.011; PTS system, fructose-specific IIABC component 3037643 ptsN 1793072 ptsN Rhodopirellula baltica SH 1 PTS system, fructose-specific IIABC component NP_866900.1 3036936 R 243090 CDS NP_866901.1 32473907 1793660 3037748..3039463 1 NC_005027.1 signal peptide 3039463 1793660 RB5797 Rhodopirellula baltica SH 1 signal peptide NP_866901.1 3037748 D 243090 CDS NP_866902.1 32473908 1796938 3039583..3039852 1 NC_005027.1 PMID: 6382163 best DB hits: BLAST: gb:AAK05984.1; AE006418_4 (AE006418) 30S ribosomal protein S15; E=2e-14 ddbj:BAB06127.1; (AP001515) 30S ribosomal protein S15 [Bacillus; E=9e-14 swissprot:P21473; RS15_BACSU 30S RIBOSOMAL PROTEIN S15 (BS18); E=1e-13 COG: BH2408; COG0184 Ribosomal protein S15P/S13E; E=1e-14 PFAM: PF00312; Ribosomal protein S15; E=3.1e-39; 30S ribosomal protein S15 3039852 rpsO 1796938 rpsO Rhodopirellula baltica SH 1 30S ribosomal protein S15 NP_866902.1 3039583 D 243090 CDS NP_866903.1 32473909 1791924 3039864..3040334 1 NC_005027.1 hypothetical protein 3040334 1791924 RB5802 Rhodopirellula baltica SH 1 hypothetical protein NP_866903.1 3039864 D 243090 CDS NP_866904.1 32473910 1793865 3040160..3042616 1 NC_005027.1 PMID: 6382163 best DB hits: BLAST: pir:C81161; polyribonucleotide nucleotidyltransferase NMB0758; E=1e-154 pir:C83052; polyribonucleotide nucleotidyltransferase PA4740; E=1e-154 pir:H81943; probable polyribonucleotide nucleotidyltransferase (EC; E=1e-154 COG: NMB0758; COG1185 Polyribonucleotide nucleotidyltransferase; E=1e-155 PFAM: PF01138; 3' exoribonuclease; E=4e-43 PF00013; KH domain; E=5.3e-07 PF00575; S1 RNA binding domain; E=1.7e-15; polynucleotide phosphorylase 3042616 pnp 1793865 pnp Rhodopirellula baltica SH 1 polynucleotide phosphorylase NP_866904.1 3040160 D 243090 CDS NP_866905.1 32473911 1790340 complement(3042794..3046204) 1 NC_005027.1 best DB hits: PFAM: PF01436; NHL repeat; E=0.0032 PF00034; Cytochrome c; E=1.1e-06; hypothetical protein 3046204 1790340 RB5806 Rhodopirellula baltica SH 1 hypothetical protein NP_866905.1 3042794 R 243090 CDS NP_866906.1 32473912 1791756 3046272..3047141 1 NC_005027.1 PMID: 11058132 best DB hits: BLAST: ddbj:BAB04428.1; (AP001509) BH0709~unknown conserved protein in; E=9e-05 pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=0.53; hypothetical protein 3047141 1791756 RB5811 Rhodopirellula baltica SH 1 hypothetical protein NP_866906.1 3046272 D 243090 CDS NP_866907.1 32473913 1791177 3047192..3048607 1 NC_005027.1 PMID: 8760916 PMID: 25878 best DB hits: BLAST: swissprot:P42251; PPBD_BACSU ALKALINE PHOSPHATASE D PRECURSOR; E=6e-09 pir:F83157; hypothetical protein PA3910 [imported] - Pseudomonas; E=5e-08 pir:T35097; probable secreted alkaline phosphatase - Streptomyces; E=2e-06; alkaline phosphatase 3048607 phoD 1791177 phoD Rhodopirellula baltica SH 1 alkaline phosphatase NP_866907.1 3047192 D 243090 CDS NP_866908.1 32473914 1789986 complement(3048604..3048807) 1 NC_005027.1 hypothetical protein 3048807 1789986 RB5815 Rhodopirellula baltica SH 1 hypothetical protein NP_866908.1 3048604 R 243090 CDS NP_866909.1 32473915 1792574 3048773..3050641 1 NC_005027.1 PMID: 2803312 PMID: 2894306 best DB hits: BLAST: pir:B82515; alpha-L-fucosidase XF2714 [imported] - Xylella; E=4e-71 embl:CAC24067.1; (AL512981) Hypothetical [Sulfolobus; E=3e-67 pir:S10235; alpha-L-fucosidase (EC 3.2.1.51) precursor - rat; E=8e-51 PFAM: PF01120; Alpha-L-fucosidase; E=4.4e-27; alpha-L-fucosidase 3050641 fucA 1792574 fucA Rhodopirellula baltica SH 1 alpha-L-fucosidase NP_866909.1 3048773 D 243090 CDS NP_866910.1 32473916 1795247 3050638..3051705 1 NC_005027.1 PMID: 7765723 PMID: 2553671 best DB hits: BLAST: embl:CAB55711.1; (AL117387) possible oxidoreductase [Streptomyces; E=3e-18 embl:CAC01651.1; (AL391072) oxidoreductase [Streptomyces; E=2e-16 pir:JC2405; D-threo-aldose 1-dehydrogenase (EC 1.1.1.122) -; E=2e-11 COG: BS_iolS; COG0667 Predicted oxidoreductases (related to aryl-alcohol; E=0.005; L-fucose dehydrogenase 3051705 fucO 1795247 fucO Rhodopirellula baltica SH 1 L-fucose dehydrogenase NP_866910.1 3050638 D 243090 CDS NP_866911.1 32473917 1794341 3051745..3053121 1 NC_005027.1 PMID: 2553671 PMID: 7783647 best DB hits: BLAST: gb:AAF01487.1; AF137263_6 (AF137263) L-fucose permease; E=1e-106 swissprot:P44776; FUCP_HAEIN L-FUCOSE PERMEASE ----- pir:; E=7e-83 swissprot:P11551; FUCP_ECOLI L-FUCOSE PERMEASE ----- pir:; E=1e-49 COG: HI0610; COG0738 Fucose permease; E=6e-84; L-fucose permease 3053121 fucP 1794341 fucP Rhodopirellula baltica SH 1 L-fucose permease NP_866911.1 3051745 D 243090 CDS NP_866912.1 32473918 1791738 complement(3053157..3053321) 1 NC_005027.1 hypothetical protein 3053321 1791738 RB5822 Rhodopirellula baltica SH 1 hypothetical protein NP_866912.1 3053157 R 243090 CDS NP_866913.1 32473919 1795615 3053289..3054269 1 NC_005027.1 essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc); ribosomal biogenesis GTPase 3054269 rbgA 1795615 rbgA Rhodopirellula baltica SH 1 ribosomal biogenesis GTPase NP_866913.1 3053289 D 243090 CDS NP_866914.1 32473920 1793337 complement(3054406..3055293) 1 NC_005027.1 PMID: 7684040 best DB hits: BLAST: pir:F83498; hypothetical protein PA1166 [imported] - Pseudomonas; E=1e-38 pir:B83447; hypothetical protein PA1597 [imported] - Pseudomonas; E=5e-36 pir:T34190; hypothetical protein D1022.4 - Caenorhabditis elegans; E=4e-33 COG: PA1166; COG0412 Dienelactone hydrolase and related enzymes; E=1e-39 VNG0409C; COG1506 Dipeptidyl; E=0.003 PFAM: PF01738; Dienelactone hydrolase; E=2.8e-44; dienelactone hydrolase 3055293 1793337 RB5825 Rhodopirellula baltica SH 1 dienelactone hydrolase NP_866914.1 3054406 R 243090 CDS NP_866915.1 32473921 1795318 complement(3055383..3056579) 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S75996; hypothetical protein - Synechocystis sp. (strain PCC; E=2e-05 pir:S77272; hypothetical protein slr0882 - Synechocystis sp. (strain; E=0.023 pir:F72217; conserved hypothetical protein - Thermotoga maritima; E=0.13 COG: sll0496; COG0795 Predicted permeases; E=2e-06; permease 3056579 1795318 RB5826 Rhodopirellula baltica SH 1 permease NP_866915.1 3055383 R 243090 CDS NP_866916.1 32473922 1791020 3056745..3056882 1 NC_005027.1 hypothetical protein 3056882 1791020 RB5829 Rhodopirellula baltica SH 1 hypothetical protein NP_866916.1 3056745 D 243090 CDS NP_866917.1 32473923 1792985 3056879..3058264 1 NC_005027.1 PMID: 1663113 PMID: 9370333 best DB hits: BLAST: pir:B82971; cardiolipin synthase PA5394 [imported] - Pseudomonas; E=3e-42 swissprot:P71040; CLS2_BACSU PROBABLE CARDIOLIPIN SYNTHETASE 2; E=4e-42 swissprot:P31048; CLS_PSEPU PROBABLE CARDIOLIPIN SYNTHETASE; E=5e-42 COG: PA5394; COG1502; E=2e-43 cls; COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiol; E=9e-32 BS_ywjE; COG1502; E=2e-31 PFAM: PF00614; Phospholipase D. Active site motif; E=1.2e-05; cardiolipin synthase 3058264 cls 1792985 cls Rhodopirellula baltica SH 1 cardiolipin synthase NP_866917.1 3056879 D 243090 CDS NP_866918.1 32473924 1791874 3058339..3058518 1 NC_005027.1 hypothetical protein 3058518 1791874 RB5831 Rhodopirellula baltica SH 1 hypothetical protein NP_866918.1 3058339 D 243090 CDS NP_866919.1 32473925 1793792 3058478..3060037 1 NC_005027.1 hypothetical protein 3060037 1793792 RB5832 Rhodopirellula baltica SH 1 hypothetical protein NP_866919.1 3058478 D 243090 CDS NP_866920.1 32473926 1792866 complement(3060045..3060473) 1 NC_005027.1 hypothetical protein 3060473 1792866 RB5834 Rhodopirellula baltica SH 1 hypothetical protein NP_866920.1 3060045 R 243090 CDS NP_866921.1 32473927 1791410 complement(3060527..3061411) 1 NC_005027.1 PMID: 1639057 best DB hits: BLAST: gb:AAD09011.1; (AF089862) type-I signal peptidase SipB; E=1e-11 swissprot:P72365; LEP_STAAU SIGNAL PEPTIDASE IB (SPASE IB) (LEADER; E=2e-09 pir:A69708; signal peptidase I sipV - Bacillus subtilis -----; E=2e-08 COG: BS_sipV; COG0681 Signal peptidase I; E=2e-09 PFAM: PF00461; Signal peptidase I; E=1.8e-11; type-I signal peptidase 3061411 1791410 RB5837 Rhodopirellula baltica SH 1 type-I signal peptidase NP_866921.1 3060527 R 243090 CDS NP_866922.1 32473928 1795581 3061378..3061746 1 NC_005027.1 hypothetical protein 3061746 1795581 RB5839 Rhodopirellula baltica SH 1 hypothetical protein NP_866922.1 3061378 D 243090 CDS NP_866923.1 32473929 1796616 3061924..3063936 1 NC_005027.1 best DB hits: BLAST: pir:T35944; probable beta-galactosidase - Streptomyces coelicolor; E=2e-04 pir:D83558; transport protein ExbB2 PA0693 [imported] - Pseudomonas; E=0.002 gb:AAA59483.1; (L34155) epiligrin alpha 3 subunit [Homo sapiens]; E=0.009 COG: sll0222; COG1409 Predicted phosphohydrolases; E=0.002; beta-galactosidase 3063936 1796616 RB5841 Rhodopirellula baltica SH 1 beta-galactosidase NP_866923.1 3061924 D 243090 CDS NP_866924.1 32473930 1796282 3064164..3065057 1 NC_005027.1 best DB hits: BLAST: pir:S74796; hypothetical protein sll1020 - Synechocystis sp. (strain; E=4e-11 pir:D69148; dolichyl-phosphate mannose synthase related protein 2 -; E=2e-10 gb:AAB90908.1; (AE001082) dolichol-P-glucose synthetase, ; E=9e-08 COG: sll1020; COG0463 Glycosyltransferases involved in cell wall; E=4e-12 yfbF; COG0463 Glycosyltransferases involved in cell wall biogenesis; E=1e-08 MTH331; COG0463 Glycosyltransferases involved in cell wall; E=2e-08 PFAM: PF00535; Glycosyl transferase; E=2.6e-18; cell wall biosynthesis glycosyltransferase 3065057 1796282 RB5846 Rhodopirellula baltica SH 1 cell wall biosynthesis glycosyltransferase NP_866924.1 3064164 D 243090 CDS NP_866925.1 32473931 1796340 complement(3065127..3065747) 1 NC_005027.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 3065747 apt 1796340 apt Rhodopirellula baltica SH 1 adenine phosphoribosyltransferase NP_866925.1 3065127 R 243090 CDS NP_866926.1 32473932 1790131 complement(3065906..3066328) 1 NC_005027.1 PMID: 2180916 best DB hits: BLAST: pir:D71366; probable dnaK suppressor - syphilis spirochete -----; E=1e-09 pir:T34677; hypothetical protein SC1A9.28c SC1A9.28c - Streptomyces; E=9e-07 pir:E81429; dksA-like protein Cj0125c [imported] - Campylobacter; E=5e-06 COG: TP0096; COG1734 DnaK suppressor protein; E=1e-10 PFAM: PF01258; Prokaryotic dksA/traR C4-type zi; E=5e-10; DnaK suppressor protein 3066328 dksA 1790131 dksA Rhodopirellula baltica SH 1 DnaK suppressor protein NP_866926.1 3065906 R 243090 CDS NP_866927.1 32473933 1793062 complement(3066307..3066498) 1 NC_005027.1 hypothetical protein 3066498 1793062 RB5850 Rhodopirellula baltica SH 1 hypothetical protein NP_866927.1 3066307 R 243090 CDS NP_866928.1 32473934 1790331 complement(3066461..3066676) 1 NC_005027.1 hypothetical protein 3066676 1790331 RB5851 Rhodopirellula baltica SH 1 hypothetical protein NP_866928.1 3066461 R 243090 CDS NP_866929.1 32473935 1791541 3066813..3070673 1 NC_005027.1 PMID: 9208928 best DB hits: BLAST: ddbj:BAA22069.1; (D89992) myosin heavy chain [Cyprinus carpio]; E=0.001 gb:AAD52842.1; AF134172_1 (AF134172) myosin heavy chain [Pecten; E=0.001 gb:AAB03661.1; (U59295) myosin heavy chain [Placopecten; E=0.001 PFAM: PF00498; FHA domain; E=3.4e-05; hypothetical protein 3070673 1791541 RB5852 Rhodopirellula baltica SH 1 hypothetical protein NP_866929.1 3066813 D 243090 CDS NP_866930.1 32473936 1791514 complement(3070709..3071869) 1 NC_005027.1 PMID: 4578954 best DB hits: BLAST: pir:G72376; alcohol dehydrogenase, zinc-containing - Thermotoga; E=7e-23 gb:AAF17283.1; (AF204805) NosE [Nostoc sp. GSV224]; E=9e-19 ddbj:BAB10455.1; (AB005234) alcohol dehydrogenase-like protein; E=1e-18 COG: TM0436; COG1063 Threonine dehydrogenase and related Zn-dependent; E=7e-24 NMB0546; COG1064 Zn-dependent alcohol dehydrogenases; E=3e-15 PA2188; COG1063 Threonine dehydrogenase and related Zn-dependent; E=3e-15 PFAM: PF00899; ThiF family; E=0.34 PF02032; Phytoene dehydrogenase related; E=0.1 PF01494; FAD binding domain; E=0.0065; alcohol dehydrogenase 3071869 adh 1791514 adh Rhodopirellula baltica SH 1 alcohol dehydrogenase NP_866930.1 3070709 R 243090 CDS NP_866931.1 32473937 1793824 complement(3071842..3072543) 1 NC_005027.1 best DB hits: BLAST: pir:F69187; epoxidase - Methanobacterium thermoautotrophicum (strain; E=3e-08 pir:A83618; probable transcriptional regulator PA0225 [imported] -; E=5e-06 pir:E69193; conserved hypothetical protein MTH700 - Methanobacterium; E=1e-05 COG: MTH659; COG1396 Predicted transcriptional regulators; E=3e-09 PFAM: PF01381; Helix-turn-helix; E=1.7e-10; transcriptional regulator 3072543 1793824 RB5858 Rhodopirellula baltica SH 1 transcriptional regulator NP_866931.1 3071842 R 243090 CDS NP_866932.1 32473938 1792639 3072559..3073902 1 NC_005027.1 best DB hits: BLAST: gb:AAG26463.1; AF285774_3 (AF285774) unknown [Bacteroides; E=5e-64 gb:AAD40705.1; AF048749_1 (AF048749) unknown [Bacteroides; E=3e-36; hypothetical protein 3073902 1792639 RB5860 Rhodopirellula baltica SH 1 hypothetical protein NP_866932.1 3072559 D 243090 CDS NP_866933.1 32473939 1795849 3073915..3075117 1 NC_005027.1 best DB hits: BLAST: embl:CAB63337.1; (AL032631) contains similarity to Pfam domain:; E=1e-06 gb:AAF57796.1; (AE003802) CG6385 gene product [Drosophila; E=2e-04 ddbj:BAB05760.1; (AP001514) BH2041~unknown conserved protein; E=0.004 COG: BH2041; COG0665 Glycine/D-amino acid oxidases (deaminating); E=3e-04 PFAM: PF00070; Pyridine nucleotide-disulphid; E=0.0033 PF02032; Phytoene dehydrogenase relate; E=0.00044; oxidase 3075117 1795849 RB5861 Rhodopirellula baltica SH 1 oxidase NP_866933.1 3073915 D 243090 CDS NP_866934.1 32473940 1795981 3075071..3075802 1 NC_005027.1 best DB hits: BLAST: pdb:1FEZ; A Chain A, The Crystal Structure Of Bacillus Cereus; E=2e-07 gb:AAC14004.1; (U33059) phosphatase [Actinosynnema pretiosum; E=8e-07 embl:CAA94730.1; (Z70724) ORF2 [Streptomyces lividans]; E=3e-06 COG: VCA0606; COG1011 Predicted hydrolases of the HAD superfamily; E=5e-06 BH3587; COG0546 Predicted phosphatases; E=2e-04 PFAM: PF00702; haloacid dehalogenase-like hydrolas; E=2.8e-18; phosphatase 3075802 1795981 RB5862 Rhodopirellula baltica SH 1 phosphatase NP_866934.1 3075071 D 243090 CDS NP_866935.1 32473941 1793621 3076242..3077567 1 NC_005027.1 PMID: 1662761 best DB hits: BLAST: gb:AAG60893.1; AF322013_12 (AF322013) ID460 [Bradyrhizobium; E=8e-34 gb:AAD45539.1; U70376_1 (U70376) InsA [Streptomyces netropsis]; E=4e-33 ddbj:BAA19966.1; (D63923) transposase [Acetobacter pasteurianus]; E=2e-27; transposase 3077567 1793621 RB5866 Rhodopirellula baltica SH 1 transposase NP_866935.1 3076242 D 243090 CDS NP_866936.1 32473942 1790016 3077578..3077730 1 NC_005027.1 hypothetical protein 3077730 1790016 RB5867 Rhodopirellula baltica SH 1 hypothetical protein NP_866936.1 3077578 D 243090 CDS NP_866937.1 32473943 1793281 complement(3077796..3078569) 1 NC_005027.1 best DB hits: BLAST: embl:CAA86239.1; (Z38113) orf, len: 215, CAI: 0.14, similar to; E=2e-04 ddbj:BAB01069.1; (AB023041) peroxiredoxin Q-like protein; E=0.011 embl:CAB09905.1; (Z97179) Bcp [Mycobacterium leprae]; E=0.032 COG: YIL010w; COG1225 Peroxiredoxins; E=2e-05 PFAM: PF00578; AhpC/TSA family; E=0.037; bacterioferritin comigratory protein (Bcp) 3078569 1793281 RB5869 Rhodopirellula baltica SH 1 bacterioferritin comigratory protein (Bcp) NP_866937.1 3077796 R 243090 CDS NP_866938.1 32473944 1797004 complement(3078660..3080117) 1 NC_005027.1 best DB hits: BLAST: swissprot:P72991; FTH4_SYNY3 CELL DIVISION PROTEIN FTSH HOMOLOG 4; E=5e-20 gb:AAG19776.1; (AE005063) cell division cycle protein; Cdc48b; E=9e-20 gb:AAF69154.1; AC007915_6 (AC007915) F27F5.8 [Arabidopsis; E=2e-19 COG: slr1604; COG0465 ATP-dependent Zn proteases; E=4e-21 VNG1472G; COG0464 ATPases of the AAA+ class; E=8e-21 PH0201; COG1222 ATP-dependent 26S proteasome regulatory subunit; E=3e-20 PFAM: PF01695; IstB-like ATP binding protein; E=0.25 PF00910; RNA helicase; E=0.35 PF00004; ATPase associated with va; E=8.6e-30; cell division protein FtsH-like protein 3080117 ftsH 1797004 ftsH Rhodopirellula baltica SH 1 cell division protein FtsH-like protein NP_866938.1 3078660 R 243090 CDS NP_866939.1 32473945 1791012 3080059..3080310 1 NC_005027.1 hypothetical protein 3080310 1791012 RB5872 Rhodopirellula baltica SH 1 hypothetical protein NP_866939.1 3080059 D 243090 CDS NP_866940.1 32473946 1791387 complement(3080332..3080766) 1 NC_005027.1 PMID: 11792842 best DB hits: PFAM: PF01137; RNA 3'-terminal phosphate cyclase; E=0.31; hypothetical protein 3080766 1791387 RB5873 Rhodopirellula baltica SH 1 hypothetical protein NP_866940.1 3080332 R 243090 CDS NP_866941.1 32473947 1791405 complement(3080798..3080941) 1 NC_005027.1 hypothetical protein 3080941 1791405 RB5874 Rhodopirellula baltica SH 1 hypothetical protein NP_866941.1 3080798 R 243090 CDS NP_866942.1 32473948 1794919 complement(3080920..3081204) 1 NC_005027.1 hypothetical protein 3081204 1794919 RB5875 Rhodopirellula baltica SH 1 hypothetical protein NP_866942.1 3080920 R 243090 CDS NP_866943.1 32473949 1794579 complement(3081263..3082249) 1 NC_005027.1 PMID: 7768349 best DB hits: BLAST: swissprot:P54737; PKN5_MYXXA SERINETHREONINE-PROTEIN KINASE PKN5; E=3e-09 gb:AAF87930.1; AF163841_9 (AF163841) serinethreonine; E=4e-09 swissprot:P54738; PKN6_MYXXA SERINETHREONINE-PROTEIN KINASE PKN6; E=1e-07 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=1e-07 PFAM: PF00069; Protein kinase domain; E=3.8e-08 PF01130; CD36 family; E=0.61; serine/threonine-protein kinase 3082249 1794579 RB5876 Rhodopirellula baltica SH 1 serine/threonine-protein kinase NP_866943.1 3081263 R 243090 CDS NP_866944.1 32473950 1793067 3082302..3082409 1 NC_005027.1 hypothetical protein 3082409 1793067 RB5877 Rhodopirellula baltica SH 1 hypothetical protein NP_866944.1 3082302 D 243090 CDS NP_866945.1 32473951 1794486 complement(3082501..3082635) 1 NC_005027.1 hypothetical protein 3082635 1794486 RB5878 Rhodopirellula baltica SH 1 hypothetical protein NP_866945.1 3082501 R 243090 CDS NP_866946.1 32473952 1794653 complement(3082619..3083017) 1 NC_005027.1 best DB hits: BLAST: embl:CAB55661.1; (AL117385) hypothetical protein [Streptomyces; E=0.38 PFAM: PF00903; Glyoxalase/Bleomycin resistance; E=0.00027; hypothetical protein 3083017 1794653 RB5880 Rhodopirellula baltica SH 1 hypothetical protein NP_866946.1 3082619 R 243090 CDS NP_866947.1 32473953 1790349 complement(3082965..3083636) 1 NC_005027.1 best DB hits: BLAST: embl:CAB75424.1; (AJ271623) ORF101~shows homology to one ORF; E=3e-04 embl:CAB53171.1; (AL109969) transcriptional regulator; E=9e-04 PFAM: PF01381; Helix-turn-helix; E=2.5e-05; transcriptional regulator 3083636 1790349 RB5881 Rhodopirellula baltica SH 1 transcriptional regulator NP_866947.1 3082965 R 243090 CDS NP_866948.1 32473954 1791606 complement(3083599..3084330) 1 NC_005027.1 hypothetical protein 3084330 1791606 RB5882 Rhodopirellula baltica SH 1 hypothetical protein NP_866948.1 3083599 R 243090 CDS NP_866949.1 32473955 1794942 complement(3084242..3084823) 1 NC_005027.1 PMID: 9278503 best DB hits: BLAST: swissprot:P76068; YNAK_ECOLI HYPOTHETICAL 9.8 KD PROTEIN IN; E=5e-05 pir:T31008; hypothetical protein 422 - Sulfolobus sp. plasmid pNOB8; E=1e-04 pir:T31049; hypothetical protein 470 - Sulfolobus sp. plasmid pNOB8; E=0.001 COG: ynaK; COG1475 Predicted transcriptional regulators; E=5e-06 PFAM: PF02195; ParB-like nuclease domain; E=1.1e-10; transcriptional regulator 3084823 1794942 RB5884 Rhodopirellula baltica SH 1 transcriptional regulator NP_866949.1 3084242 R 243090 CDS NP_866950.1 32473956 1792277 complement(3084898..3086475) 1 NC_005027.1 hypothetical protein 3086475 1792277 RB5886 Rhodopirellula baltica SH 1 hypothetical protein NP_866950.1 3084898 R 243090 CDS NP_866951.1 32473957 1790953 complement(3086465..3087343) 1 NC_005027.1 PMID: 10384242 best DB hits: BLAST: gb:AAA88919.1; (U13013) ORFB [Leptospira interrogans]; E=1e-46 gb:AAA88916.1; (U13012) ORFB [Leptospira interrogans]; E=5e-46 gb:AAC05649.1; (AF038931) probable transposase-related protein; E=6e-45 COG: DRB0019.2; COG2801 transposase; E=1e-35 PFAM: PF00665; Integrase core domain; E=4.8e-40; transposase 3087343 1790953 RB5887 Rhodopirellula baltica SH 1 transposase NP_866951.1 3086465 R 243090 CDS NP_866952.1 32473958 1792181 complement(3087346..3087636) 1 NC_005027.1 PMID: 2824781 best DB hits: BLAST: gb:AAG58100.1; AE005527_3 (AE005527) unknown protein encoded by; E=0.002 gb:AAG53987.1; AF327445_1 (AF327445) transposase A; E=0.003 gb:AAF28119.1; AF153317_15 (AF153317) InsA [Shigella; E=0.007 COG: PA1937; COG2963 Transposase; E=0.004 PFAM: PF01381; Helix-turn-helix; E=0.53 PF01527; Transposase; E=6.1e-18; transposase A 3087636 1792181 RB5888 Rhodopirellula baltica SH 1 transposase A NP_866952.1 3087346 R 243090 CDS NP_866953.1 32473959 1793393 3087578..3087817 1 NC_005027.1 hypothetical protein 3087817 1793393 RB5892 Rhodopirellula baltica SH 1 hypothetical protein NP_866953.1 3087578 D 243090 CDS NP_866954.1 32473960 1792666 complement(3088294..3090420) 1 NC_005027.1 PMID: 11832943 best DB hits: BLAST: pir:F81221; hypothetical protein NMB0240 [imported] - Neisseria; E=0.018 pir:H81992; probable integral membrane protein NMA0020 [imported] -; E=0.018 embl:CAB95777.1; (AL359949) hypothetical protein [Streptomyces; E=0.20; hypothetical protein 3090420 1792666 RB5895 Rhodopirellula baltica SH 1 hypothetical protein NP_866954.1 3088294 R 243090 CDS NP_866955.1 32473961 1794911 3090375..3090551 1 NC_005027.1 hypothetical protein 3090551 1794911 RB5896 Rhodopirellula baltica SH 1 hypothetical protein NP_866955.1 3090375 D 243090 CDS NP_866956.1 32473962 1790325 complement(3090681..3091814) 1 NC_005027.1 best DB hits: BLAST: pir:D69100; probable protein disulfide-isomerase (EC 5.3.4.1); E=7e-07 gb:AAG20098.1; (AE005089) Vng1905c [Halobacterium sp. NRC-1]; E=9e-05 gb:AAB89512.1; (AE000983) conserved hypothetical protein; E=1e-04 COG: MTH1745; COG0526 Thiol-disulfide isomerase and thioredoxins; E=6e-08 VNG1905C; COG1331 Highly conserved protein containing a thioredoxin; E=9e-06 VCA0647; COG3350 Uncharacterized ACR; E=0.009; protein disulfide-isomerase 3091814 trx 1790325 trx Rhodopirellula baltica SH 1 protein disulfide-isomerase NP_866956.1 3090681 R 243090 CDS NP_866957.1 32473963 1794122 complement(3091748..3092014) 1 NC_005027.1 hypothetical protein 3092014 1794122 RB5899 Rhodopirellula baltica SH 1 hypothetical protein NP_866957.1 3091748 R 243090 CDS NP_866958.1 32473964 1792699 complement(3092170..3094272) 1 NC_005027.1 best DB hits: PFAM: PF00092; von Willebrand factor type A; E=0.0045; hypothetical protein 3094272 1792699 RB5901 Rhodopirellula baltica SH 1 hypothetical protein NP_866958.1 3092170 R 243090 CDS NP_866959.1 32473965 1791270 3094315..3094491 1 NC_005027.1 hypothetical protein 3094491 1791270 RB5903 Rhodopirellula baltica SH 1 hypothetical protein NP_866959.1 3094315 D 243090 CDS NP_866960.1 32473966 1792979 3094488..3095168 1 NC_005027.1 PMID: 9130712 best DB hits: BLAST: pir:A72340; serinethreonine protein phosphatase - Thermotoga; E=4e-22 gb:AAB68789.1; (U97022) orf; similar to serinethreonine protein; E=7e-22 pir:S75676; probable phosphoesterase (EC 3.1.-.-) sll1387 -; E=4e-20 COG: TM0742; COG0639 Diadenosine tetraphosphatase and related; E=3e-23; serine/threonine protein phosphatase 3095168 1792979 RB5905 Rhodopirellula baltica SH 1 serine/threonine protein phosphatase NP_866960.1 3094488 D 243090 CDS NP_866961.1 32473967 1791561 complement(3095195..3095761) 1 NC_005027.1 signal peptide 3095761 1791561 RB5907 Rhodopirellula baltica SH 1 signal peptide NP_866961.1 3095195 R 243090 CDS NP_866962.1 32473968 1792325 complement(3095758..3096315) 1 NC_005027.1 best DB hits: BLAST: swissprot:P31589; GSPJ_ERWCA GENERAL SECRETION PATHWAY PROTEIN J; E=0.64; hypothetical protein 3096315 1792325 RB5908 Rhodopirellula baltica SH 1 hypothetical protein NP_866962.1 3095758 R 243090 CDS NP_866963.1 32473969 1790310 complement(3096300..3096749) 1 NC_005027.1 hypothetical protein 3096749 1790310 RB5909 Rhodopirellula baltica SH 1 hypothetical protein NP_866963.1 3096300 R 243090 CDS NP_866964.1 32473970 1795123 complement(3096746..3097234) 1 NC_005027.1 signal peptide 3097234 1795123 RB5913 Rhodopirellula baltica SH 1 signal peptide NP_866964.1 3096746 R 243090 CDS NP_866965.1 32473971 1790868 3097264..3097434 1 NC_005027.1 hypothetical protein 3097434 1790868 RB5914 Rhodopirellula baltica SH 1 hypothetical protein NP_866965.1 3097264 D 243090 CDS NP_866966.1 32473972 1792803 complement(3097446..3097778) 1 NC_005027.1 hypothetical protein 3097778 1792803 RB5915 Rhodopirellula baltica SH 1 hypothetical protein NP_866966.1 3097446 R 243090 CDS NP_866967.1 32473973 1794489 complement(3097957..3098715) 1 NC_005027.1 PMID: 3899863 PMID: 1409631 best DB hits: BLAST: gb:AAK05878.1; AE006408_2 (AE006408) bifunctional protein BirA (EC; E=1e-17 pir:A83112; BirA bifunctional protein PA4280 [imported] -; E=1e-16 swissprot:P29906; BIRA_PARDE BIOTIN--[ACETYL-COA-CARBOXYLASE]; E=6e-15 COG: PA4280_2; COG0340 Biotin-(acetyl-CoA carboxylase) ligase; E=1e-17 PFAM: PF01317; Biotin protein ligase catalytic doma; E=6.2e-30 PF02237; Biotin protein ligase C terminal dom; E=5.4e-05; bifunctional protein BirA 3098715 birA 1794489 birA Rhodopirellula baltica SH 1 bifunctional protein BirA NP_866967.1 3097957 R 243090 CDS NP_866968.1 32473974 1795496 complement(3098712..3100763) 1 NC_005027.1 PMID: 10322433 best DB hits: BLAST: swissprot:Q00808; HET1_PODAN VEGETATIBLE INCOMPATIBILITY PROTEIN; E=3e-25 swissprot:P49695; PKWA_THECU SERINETHREONINE-PROTEIN; E=5e-21 swissprot:Q9UGP9; WDR5_HUMAN WD-REPEAT PROTEIN 5 ----- embl:; E=8e-20 COG: slr0143_2; COG2319 WD40 repeat protein; E=1e-16 PFAM: PF00400; WD domain, G-beta repeat; E=0.0064; hypothetical protein 3100763 1795496 RB5920 Rhodopirellula baltica SH 1 hypothetical protein NP_866968.1 3098712 R 243090 CDS NP_866969.1 32473975 1792568 complement(3100793..3103288) 1 NC_005027.1 best DB hits: BLAST: gb:AAB53736.1; (U95056) surface protein Lk90 [Leptospira; E=0.38 PFAM: PF02368; Bacterial Ig-like domain (grou; E=6.3e-05; surface protein 3103288 1792568 RB5921 Rhodopirellula baltica SH 1 surface protein NP_866969.1 3100793 R 243090 CDS NP_866970.1 32473976 1791954 complement(3103285..3105828) 1 NC_005027.1 best DB hits: BLAST: pir:A75582; serine proteinase, subtilase - Deinococcus; E=0.003 COG: DRA0283; COG1404 Subtilisin-like serine proteases; E=3e-04 PFAM: PF00630; Filamin/ABP280 repeat.; E=0.16; serine protease 3105828 1791954 RB5924 Rhodopirellula baltica SH 1 serine protease NP_866970.1 3103285 R 243090 CDS NP_866971.1 32473977 1792424 complement(3105905..3107242) 1 NC_005027.1 PMID: 11823852; sulfatase 3107242 1792424 RB5927 Rhodopirellula baltica SH 1 sulfatase NP_866971.1 3105905 R 243090 CDS NP_866972.1 32473978 1793955 3107256..3107480 1 NC_005027.1 hypothetical protein 3107480 1793955 RB5929 Rhodopirellula baltica SH 1 hypothetical protein NP_866972.1 3107256 D 243090 CDS NP_866973.1 32473979 1790508 complement(3107566..3108216) 1 NC_005027.1 hypothetical protein 3108216 1790508 RB5930 Rhodopirellula baltica SH 1 hypothetical protein NP_866973.1 3107566 R 243090 CDS NP_866974.1 32473980 1795710 complement(3108299..3110278) 1 NC_005027.1 PMID: 8182085 PMID: 2198286 best DB hits: BLAST: pir:E71101; probable geranylgeranyl pyrophosphate synthetase -; E=9e-17 gb:AAD47627.1; (AF153713) octylprenyl diphosphate synthase-like; E=1e-16 swissprot:Q53479; IDSA_METTM BIFUNCTIONAL SHORT CHAIN ISOPRENYL; E=2e-15 COG: PH1072; COG0142 Geranylgeranyl pyrophosphate synthase; E=9e-18 AF0204; COG1852 Uncharacterized ArCR; E=3e-13 NMB0261; COG0142 Geranylgeranyl pyrophosphate synthase; E=4e-13 PFAM: PF01976; Protein of unknown function D; E=6e-24 PF00348; Polyprenyl synthetase; E=3.4e-09; polyprenyl synthetase 3110278 1795710 RB5932 Rhodopirellula baltica SH 1 polyprenyl synthetase NP_866974.1 3108299 R 243090 CDS NP_866975.1 32473981 1791082 complement(3110275..3112260) 1 NC_005027.1 PMID: 7894707 best DB hits: BLAST: pir:T35404; probable squalene-hopene cyclase - Streptomyces; E=6e-15 embl:CAA71101.1; (Y09979) squalene-hopene cyclase; E=1e-14 swissprot:P55348; SQHC_RHISN PROBABLE SQUALENE--HOPENE CYCLASE; E=2e-11 COG: slr2089; COG1657 Squalene cyclase; E=4e-09 PFAM: PF00432; Prenyltransferase and squalene ox; E=1.5e-06; squalene-hopene cyclase 3112260 shc 1791082 shc Rhodopirellula baltica SH 1 squalene-hopene cyclase NP_866975.1 3110275 R 243090 CDS NP_866976.1 32473982 1791273 3112147..3113067 1 NC_005027.1 hypothetical protein 3113067 1791273 RB5937 Rhodopirellula baltica SH 1 hypothetical protein NP_866976.1 3112147 D 243090 CDS NP_866977.1 32473983 1791656 complement(3112372..3113484) 1 NC_005027.1 signal peptide 3113484 1791656 RB5938 Rhodopirellula baltica SH 1 signal peptide NP_866977.1 3112372 R 243090 CDS NP_866978.1 32473984 1789988 3113462..3113581 1 NC_005027.1 hypothetical protein 3113581 1789988 RB5939 Rhodopirellula baltica SH 1 hypothetical protein NP_866978.1 3113462 D 243090 CDS NP_866979.1 32473985 1790993 3113588..3114967 1 NC_005027.1 PMID: 8438237 PMID: 11566992 best DB hits: BLAST: gb:AAB36933.1; (U77780) secretory protein kinase [Chlorobium; E=1e-118 gb:AAF40195.1; AF229646_7 (AF229646) CpaF [Caulobacter crescentus]; E=1e-108 gb:AAD38172.2; AF152598_1 (AF152598) TadA [Actinobacillus; E=1e-101 COG: PA4302; COG0630 Predicted ATPases involved in pili and flagella; E=2e-92 PFAM: PF00004; ATPase associated with; E=0.6 PF01580; FtsK/SpoIIIE family; E=0.017 PF01443; Viral (Superfamily 1) RNA hel; E=0.48; secretion system protein TadA 3114967 tadA 1790993 tadA Rhodopirellula baltica SH 1 secretion system protein TadA NP_866979.1 3113588 D 243090 CDS NP_866980.1 32473986 1793971 3115005..3116048 1 NC_005027.1 PMID: 10880436 best DB hits: BLAST: gb:AAF40196.1; AF229646_8 (AF229646) TadB [Caulobacter crescentus]; E=2e-19 pir:D83108; hypothetical protein PA4301 [imported] - Pseudomonas; E=5e-12 embl:CAB92603.1; (AL356813) integral membrane protein; E=2e-09 COG: PA4301; COG2064 Predicted membrane protein; E=5e-13; secretion system protein TadB 3116048 tadB 1793971 tadB Rhodopirellula baltica SH 1 secretion system protein TadB NP_866980.1 3115005 D 243090 CDS NP_866981.1 32473987 1791454 3116114..3117100 1 NC_005027.1 PMID: 10880436 best DB hits: BLAST: embl:CAB92604.1; (AL356813) integral membrane protein; E=6e-09 gb:AAK02931.1; (AE006123) TadC [Pasteurella multocida]; E=2e-08 pir:C83108; hypothetical protein PA4300 [imported] - Pseudomonas; E=3e-08 COG: PH0653; COG2064 Predicted membrane protein; E=3e-05; secretion system protein TadC 3117100 tadC 1791454 tadC Rhodopirellula baltica SH 1 secretion system protein TadC NP_866981.1 3116114 D 243090 CDS NP_866982.1 32473988 1793075 complement(3117148..3117546) 1 NC_005027.1 PMID: 7699720 PMID: 1454550 best DB hits: BLAST: embl:CAA47908.1; (X67676) phoP [Bacillus subtilis]; E=1e-15 gb:AAA22661.1; (M16775) phoP protein (put.); [Bacillus; E=1e-15 swissprot:P13792; PHOP_BACSU ALKALINE PHOSPHATASE SYNTHESIS; E=1e-15 COG: BS_phoP; COG0745 Response regulators consisting of a CheY-like; E=1e-16 sll0043_4; COG0784 CheY-like receiver domains; E=4e-15 Rv0757; COG0745 Response regulators consisting of a CheY-like; E=4e-15 PFAM: PF00072; Response regulator receiver doma; E=4.8e-28; response regulator 3117546 1793075 RB5943 Rhodopirellula baltica SH 1 response regulator NP_866982.1 3117148 R 243090 CDS NP_866983.1 32473989 1795413 complement(3117554..3118402) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAA75358.1; (AB013363) YvaM [Bacillus halodurans] -----; E=0.63 PFAM: PF02230; Phospholipase/Carboxylesterase; E=0.0014; hypothetical protein 3118402 1795413 RB5945 Rhodopirellula baltica SH 1 hypothetical protein NP_866983.1 3117554 R 243090 CDS NP_866984.1 32473990 1795198 complement(3118447..3119487) 1 NC_005027.1 PMID: 3622514 best DB hits: BLAST: prf:2104227E; 2,3-butanediol dehydrogenase [Pseudomonas putida]; E=3e-40 pir:C83128; 2,3-butanediol dehydrogenase PA4153 [imported] -; E=4e-40 ddbj:BAB03906.1; (AP001507) sorbitol dehydrogenase [Bacillus; E=1e-38 COG: PA4153; COG1063 Threonine dehydrogenase and related Zn-dependent; E=4e-41 Rv3086; COG1062 Zn-dependent alcohol dehydrogenases, class III; E=7e-26 PFAM: PF00107; Zinc-binding dehydrogenases; E=4.4e-92; Zn-dependent alcohol dehydrogenase 3119487 adh 1795198 adh Rhodopirellula baltica SH 1 Zn-dependent alcohol dehydrogenase NP_866984.1 3118447 R 243090 CDS NP_866985.1 32473991 1790884 3119900..3121381 1 NC_005027.1 best DB hits: BLAST: pir:T50226; hypothetical protein SPAC607.06c [imported] - fission; E=1e-19 embl:CAA86272.1; (Z38125) orf, len: 696, CAI: 0.15 [Saccharomyces; E=3e-13 pir:T42995; hypothetical protein - fission yeast; E=4e-10; hypothetical protein 3121381 1790884 RB5952 Rhodopirellula baltica SH 1 hypothetical protein NP_866985.1 3119900 D 243090 CDS NP_866986.1 32473992 1793515 3121488..3122021 1 NC_005027.1 signal peptide 3122021 1793515 RB5955 Rhodopirellula baltica SH 1 signal peptide NP_866986.1 3121488 D 243090 CDS NP_866987.1 32473993 1793534 3122093..3122557 1 NC_005027.1 hypothetical protein 3122557 1793534 RB5957 Rhodopirellula baltica SH 1 hypothetical protein NP_866987.1 3122093 D 243090 CDS NP_866988.1 32473994 1791636 complement(3122679..3124154) 1 NC_005027.1 signal peptide 3124154 1791636 RB5960 Rhodopirellula baltica SH 1 signal peptide NP_866988.1 3122679 R 243090 CDS NP_866989.1 32473995 1794714 complement(3124275..3124895) 1 NC_005027.1 best DB hits: BLAST: pir:B75318; ferripyochelin-binding protein - Deinococcus radiodurans; E=1e-38 gb:AAB88579.1; (M82832) unknown [Pseudomonas aeruginosa]; E=2e-34 swissprot:P40882; Y1F3_PSEAE HYPOTHETICAL PROTEIN PA3753 -----; E=2e-34 COG: DR2089; COG0663 Carbonic anhydrases/acetyltransferases, isoleucine; E=1e-39 PFAM: PF00132; Bacterial transferase hexapeptide (f; E=0.67; ferripyochelin-binding protein 3124895 1794714 RB5961 Rhodopirellula baltica SH 1 ferripyochelin-binding protein NP_866989.1 3124275 R 243090 CDS NP_866990.1 32473996 1791884 3125043..3125837 1 NC_005027.1 hypothetical protein 3125837 1791884 RB5963 Rhodopirellula baltica SH 1 hypothetical protein NP_866990.1 3125043 D 243090 CDS NP_866991.1 32473997 1794734 complement(3125819..3128293) 1 NC_005027.1 best DB hits: BLAST: pir:H70302; conserved hypothetical protein aq_035 - Aquifex aeolicus; E=1e-28 pir:A71678; probable response regulatory protein RP237 - Rickettsia; E=3e-26 pir:E72220; conserved hypothetical protein - Thermotoga maritima; E=1e-24 COG: aq_035_2; COG2199 Diguanylate cyclase/phosphodiesterase domain 1; E=1e-29 TM1699_2; COG2206 HD-GYP domain; E=1e-24 aq_563_2; COG2199 Diguanylate cyclase/phosphodiesterase domain 1; E=2e-24 PFAM: PF01966; HD domain; E=6.6e-08 PF00989; PAS domain; E=0.032 PF00990; GGDEF domain; E=3.6e-53; response regulatory protein 3128293 1794734 RB5964 Rhodopirellula baltica SH 1 response regulatory protein NP_866991.1 3125819 R 243090 CDS NP_866992.1 32473998 1793605 3128115..3128537 1 NC_005027.1 hypothetical protein 3128537 1793605 RB5966 Rhodopirellula baltica SH 1 hypothetical protein NP_866992.1 3128115 D 243090 CDS NP_866993.1 32473999 1790648 complement(3128254..3128520) 1 NC_005027.1 hypothetical protein 3128520 1790648 RB5967 Rhodopirellula baltica SH 1 hypothetical protein NP_866993.1 3128254 R 243090 CDS NP_866994.1 32474000 1791429 3128602..3129225 1 NC_005027.1 best DB hits: BLAST: pir:B72234; RNA polymerase sigma-E factor - Thermotoga maritima; E=0.42 gb:AAC14121.1; (AF056199) sigma factor E [Streptomyces; E=0.80 PFAM: PF00140; Sigma-70 factor; E=4.9e-05 PF00196; Bacterial regulatory proteins,; E=0.19; RNA polymerase sigma-E factor 3129225 1791429 RB5968 Rhodopirellula baltica SH 1 RNA polymerase sigma-E factor NP_866994.1 3128602 D 243090 CDS NP_866995.1 32474001 1795877 3129301..3131550 1 NC_005027.1 PMID: 3027506 best DB hits: BLAST: pir:E83226; ATP-dependent DNA helicase RecQ PA3344 [imported] -; E=1e-127 pir:T34609; probable helicase - Streptomyces coelicolor -----; E=1e-126 pir:G75413; DNA helicase RecQ - Deinococcus radiodurans (strain R1); E=1e-125 COG: PA3344; COG0514 Superfamily II DNA helicase; E=1e-128 slr0083; COG0513 Superfamily II DNA and RNA helicases; E=1e-12 PFAM: PF00271; Helicase conserved C-terminal dom; E=0.15 PF00270; DEAD/DEAH box helicase; E=2.2e-29 PF00271; Helicase conserved C-terminal dom; E=1.9e-25; ATP-dependent DNA helicase RecQ 3131550 recQ 1795877 recQ Rhodopirellula baltica SH 1 ATP-dependent DNA helicase RecQ NP_866995.1 3129301 D 243090 CDS NP_866996.1 32474002 1793127 complement(3131592..3132572) 1 NC_005027.1 PMID: 7921236 best DB hits: BLAST: pir:H83402; membrane protein component of ABC ribose transporter; E=2e-51 gb:AAK02238.1; (AE006050) RbsC [Pasteurella multocida]; E=2e-24 swissprot:P44736; RBSC_HAEIN RIBOSE TRANSPORT SYSTEM PERMEASE; E=3e-24 COG: PA1948; COG1172 Ribose/xylose/arabinose/galactoside ABC-type; E=1e-52 rbsC; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport; E=2e-20 TM0112; COG1172 Ribose/xylose/arabinose/galactoside ABC-type; E=5e-17 PFAM: PF02653; Branched-chain amino acid transp; E=0.58; ribose transport system permease RbsC 3132572 rbsC 1793127 rbsC Rhodopirellula baltica SH 1 ribose transport system permease RbsC NP_866996.1 3131592 R 243090 CDS NP_866997.1 32474003 1792079 complement(3132545..3134113) 1 NC_005027.1 PMID: 3086314 best DB hits: BLAST: pir:G83402; ribose transport protein RbsA PA1947 [imported] -; E=1e-103 gb:AAK05735.1; AE006394_5 (AE006394) ribose ABC transporter ATP; E=3e-85 pir:E72314; ribose ABC transporter ATP-binding protein - Thermotoga; E=4e-83 COG: PA1947; COG1129 ABC-type sugar (aldose) transport system, ATPase; E=1e-104 PFAM: PF00005; ABC transporter; E=4.5e-45; ribose transport ATP-binding protein RbsA 3134113 rbsA 1792079 rbsA Rhodopirellula baltica SH 1 ribose transport ATP-binding protein RbsA NP_866997.1 3132545 R 243090 CDS NP_866998.1 32474004 1790800 complement(3134110..3135243) 1 NC_005027.1 PMID: 6313683 best DB hits: BLAST: pir:F83402; binding protein component precursor of ABC ribose; E=4e-88 gb:AAK03409.1; (AE006170) unknown [Pasteurella multocida]; E=3e-42 pir:C82497; ribose ABC transporter, periplasmic D-ribose-binding; E=6e-29 COG: PA1946; COG1879 Periplasmic sugar-binding proteins; E=4e-89 BH3727; COG1609 Transcriptional regulators; E=4e-09 HI1111; COG1879 Periplasmic sugar-binding proteins; E=5e-08 PFAM: PF00532; Periplasmic binding proteins; E=1.3e-11; D-ribose-binding periplasmic protein 3135243 rbsB 1790800 rbsB Rhodopirellula baltica SH 1 D-ribose-binding periplasmic protein NP_866998.1 3134110 R 243090 CDS NP_866999.1 32474005 1794969 3135318..3135482 1 NC_005027.1 hypothetical protein 3135482 1794969 RB5976 Rhodopirellula baltica SH 1 hypothetical protein NP_866999.1 3135318 D 243090 CDS NP_867000.1 32474006 1791616 3135599..3136117 1 NC_005027.1 signal peptide 3136117 1791616 RB5979 Rhodopirellula baltica SH 1 signal peptide NP_867000.1 3135599 D 243090 CDS NP_867001.1 32474007 1794346 3136114..3137451 1 NC_005027.1 PMID: 20365717 best DB hits: BLAST: pir:H82642; hypothetical protein XF1738 [imported] - Xylella; E=3e-46 ddbj:BAB09974.1; (AB010692) gene_id:K18I23.11~unknown protein; E=3e-16 COG: XF1738; COG3202 ATP/ADP translocase; E=3e-47 PFAM: PF01681; C6 domain; E=0.37; ATP/ADP translocase 3137451 1794346 RB5982 Rhodopirellula baltica SH 1 ATP/ADP translocase NP_867001.1 3136114 D 243090 CDS NP_867002.1 32474008 1795838 3137623..3138486 1 NC_005027.1 PMID: 10393305 best DB hits: BLAST: swissprot:P73326; ARGB_SYNY3 ACETYLGLUTAMATE KINASE (NAG KINASE); E=3e-58 swissprot:O67848; ARGB_AQUAE ACETYLGLUTAMATE KINASE (NAG KINASE); E=6e-58 swissprot:Q60382; ARGB_METJA PROBABLE ACETYLGLUTAMATE KINASE (NAG; E=2e-56 COG: slr1898; COG0548 Acetylglutamate kinase; E=3e-59 PFAM: PF00696; Amino acid kinase; E=2.1e-40; acetylglutamate kinase 3138486 argB 1795838 argB Rhodopirellula baltica SH 1 acetylglutamate kinase NP_867002.1 3137623 D 243090 CDS NP_867003.1 32474009 1790374 3138483..3140003 1 NC_005027.1 PMID: 9002618 best DB hits: BLAST: swissprot:Q58131; ARGD_METJA ACETYLORNITHINE AMINOTRANSFERASE; E=2e-08 swissprot:O66442; ARGD_AQUAE ACETYLORNITHINE AMINOTRANSFERASE; E=5e-05 swissprot:O04866; ARGD_ALNGL ACETYLORNITHINE AMINOTRANSFERASE,; E=8e-04 COG: MJ0721; COG0160 PLP-dependent aminotransferases; E=2e-09; acetylornithine aminotransferase 3140003 1790374 RB5984 Rhodopirellula baltica SH 1 acetylornithine aminotransferase NP_867003.1 3138483 D 243090 CDS NP_867004.1 32474010 1790857 3140000..3140941 1 NC_005027.1 PMID: 3072022 PMID: 9275160 best DB hits: BLAST: ddbj:BAB06613.1; (AP001517) ornithine carbamoyltransferase; E=7e-72 swissprot:O93656; OTC_PYRAB ORNITHINE CARBAMOYLTRANSFERASE; E=2e-68 gb:AAD09004.1; (AF083209) ornithine carbamoyltransferase; E=4e-68 COG: BH2894; COG0078 Ornithine carbamoyltransferase; E=7e-73 PFAM: PF02703; Early E1A protein; E=0.31 PF02729; Aspartate/ornithine carbamoyltransf; E=7.3e-43 PF00185; Aspartate/ornithine carbamoyltransf; E=2.7e-48; ornithine carbamoyltransferase 3140941 argF 1790857 argF Rhodopirellula baltica SH 1 ornithine carbamoyltransferase NP_867004.1 3140000 D 243090 CDS NP_867005.1 32474011 1793850 complement(3140970..3141494) 1 NC_005027.1 signal peptide 3141494 1793850 RB5988 Rhodopirellula baltica SH 1 signal peptide NP_867005.1 3140970 R 243090 CDS NP_867006.1 32474012 1796076 complement(3141554..3141715) 1 NC_005027.1 hypothetical protein 3141715 1796076 RB5989 Rhodopirellula baltica SH 1 hypothetical protein NP_867006.1 3141554 R 243090 CDS NP_867007.1 32474013 1794593 complement(3141577..3141918) 1 NC_005027.1 hypothetical protein 3141918 1794593 RB5990 Rhodopirellula baltica SH 1 hypothetical protein NP_867007.1 3141577 R 243090 CDS NP_867008.1 32474014 1795176 3141889..3143013 1 NC_005027.1 best DB hits: BLAST: pir:G69146; capsular polysaccharide biosynthesis protein -; E=6e-16 swissprot:O05083; YG98_HAEIN GLYCOSYL TRANSFERASE HI1698; E=9e-16 embl:CAA72352.1; (Y11648) wlaC [Campylobacter jejuni]; E=5e-15 COG: MTH362; COG0438 Predicted glycosyltransferases; E=5e-17 PFAM: PF00534; Glycosyl transferases group 1; E=1.8e-36; capsular polysaccharide biosynthesis protein 3143013 1795176 RB5991 Rhodopirellula baltica SH 1 capsular polysaccharide biosynthesis protein NP_867008.1 3141889 D 243090 CDS NP_867009.1 32474015 1795830 3143036..3143278 1 NC_005027.1 hypothetical protein 3143278 1795830 RB5992 Rhodopirellula baltica SH 1 hypothetical protein NP_867009.1 3143036 D 243090 CDS NP_867010.1 32474016 1794591 3143179..3144207 1 NC_005027.1 PMID: 3419283 PMID: 2304552 PMID: 1404390 best DB hits: BLAST: pir:F82202; hypothetical protein VC1418 [imported] - Vibrio cholerae; E=5e-11 gb:AAF32408.1; (AF229435) lipase precursor [Rhizopus arrhizus]; E=6e-10 swissprot:P19515; LIP_RHIMI LIPASE PRECURSOR (TRIACYLGLYCEROL; E=7e-10 PFAM: PF01764; Lipase (class 3); E=1.3e-23; lipase 3144207 1794591 RB5993 Rhodopirellula baltica SH 1 lipase NP_867010.1 3143179 D 243090 CDS NP_867011.1 32474017 1792222 3144218..3145246 1 NC_005027.1 best DB hits: BLAST: pir:T35917; probable regulatory protein - Streptomyces coelicolor; E=4e-08 swissprot:Q51664; NORQ_PARDE NORQ PROTEIN ----- gb: AAA68972.1; E=3e-07 swissprot:Q51481; NIRQ_PSEAE DENITRIFICATION REGULATORY PROTEIN; E=2e-06 COG: PA0520; COG0714 MoxR-like ATPases; E=1e-07; regulatory protein 3145246 1792222 RB5995 Rhodopirellula baltica SH 1 regulatory protein NP_867011.1 3144218 D 243090 CDS NP_867012.1 32474018 1792140 complement(3145288..3145458) 1 NC_005027.1 hypothetical protein 3145458 1792140 RB5996 Rhodopirellula baltica SH 1 hypothetical protein NP_867012.1 3145288 R 243090 CDS NP_867013.1 32474019 1792021 3145505..3146023 1 NC_005027.1 catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B 3146023 rpiB 1792021 rpiB Rhodopirellula baltica SH 1 ribose-5-phosphate isomerase B NP_867013.1 3145505 D 243090 CDS NP_867014.1 32474020 1795159 complement(3146080..3146982) 1 NC_005027.1 PMID: 8402918 PMID: 9311978 PMID: 9082984 best DB hits: BLAST: ddbj:BAB06184.1; (AP001515) integraserecombinase [Bacillus; E=3e-55 ddbj:BAB05248.1; (AP001512) integraserecombinase [Bacillus; E=9e-53 gb:AAC64162.1; (AF093548) tyrosine recombinase XerD; E=2e-49 COG: BH2465; COG0582 Integrase; E=2e-56 PFAM: PF02899; Phage integrase, N-terminal S; E=8.6e-26 PF00589; Phage integrase; E=3.9e-44; integrase/recombinase 3146982 1795159 RB5999 Rhodopirellula baltica SH 1 integrase/recombinase NP_867014.1 3146080 R 243090 CDS NP_867015.1 32474021 1792754 complement(3147011..3147349) 1 NC_005027.1 hypothetical protein 3147349 1792754 RB6002 Rhodopirellula baltica SH 1 hypothetical protein NP_867015.1 3147011 R 243090 CDS NP_867016.1 32474022 1795712 complement(3147328..3148674) 1 NC_005027.1 signal peptide 3148674 1795712 RB6003 Rhodopirellula baltica SH 1 signal peptide NP_867016.1 3147328 R 243090 CDS NP_867017.1 32474023 1796584 complement(3148678..3148950) 1 NC_005027.1 hypothetical protein 3148950 1796584 RB6005 Rhodopirellula baltica SH 1 hypothetical protein NP_867017.1 3148678 R 243090 CDS NP_867018.1 32474024 1792149 complement(3149031..3149564) 1 NC_005027.1 hypothetical protein 3149564 1792149 RB6007 Rhodopirellula baltica SH 1 hypothetical protein NP_867018.1 3149031 R 243090 CDS NP_867019.1 32474025 1792392 complement(3149573..3149941) 1 NC_005027.1 hypothetical protein 3149941 1792392 RB6009 Rhodopirellula baltica SH 1 hypothetical protein NP_867019.1 3149573 R 243090 CDS NP_867020.1 32474026 1790470 3149911..3150072 1 NC_005027.1 hypothetical protein 3150072 1790470 RB6010 Rhodopirellula baltica SH 1 hypothetical protein NP_867020.1 3149911 D 243090 CDS NP_867021.1 32474027 1796680 complement(3150083..3150235) 1 NC_005027.1 hypothetical protein 3150235 1796680 RB6011 Rhodopirellula baltica SH 1 hypothetical protein NP_867021.1 3150083 R 243090 CDS NP_867022.1 32474028 1791763 complement(3150246..3151547) 1 NC_005027.1 PMID: 1662761 best DB hits: BLAST: gb:AAD45539.1; U70376_1 (U70376) InsA [Streptomyces netropsis]; E=5e-33 gb:AAG60893.1; AF322013_12 (AF322013) ID460 [Bradyrhizobium; E=8e-33 ddbj:BAA19966.1; (D63923) transposase [Acetobacter pasteurianus]; E=1e-26; transposase 3151547 1791763 RB6012 Rhodopirellula baltica SH 1 transposase NP_867022.1 3150246 R 243090 CDS NP_867023.1 32474029 1790710 complement(3151570..3152304) 1 NC_005027.1 hypothetical protein 3152304 1790710 RB6013 Rhodopirellula baltica SH 1 hypothetical protein NP_867023.1 3151570 R 243090 CDS NP_867024.1 32474030 1791620 3152367..3152807 1 NC_005027.1 signal peptide 3152807 1791620 RB6014 Rhodopirellula baltica SH 1 signal peptide NP_867024.1 3152367 D 243090 CDS NP_867025.1 32474031 1792361 3152860..3153426 1 NC_005027.1 hypothetical protein 3153426 1792361 RB6016 Rhodopirellula baltica SH 1 hypothetical protein NP_867025.1 3152860 D 243090 CDS NP_867026.1 32474032 1791054 complement(3153562..3154134) 1 NC_005027.1 hypothetical protein 3154134 1791054 RB6018 Rhodopirellula baltica SH 1 hypothetical protein NP_867026.1 3153562 R 243090 CDS NP_867027.1 32474033 1793519 complement(3154198..3154683) 1 NC_005027.1 hypothetical protein 3154683 1793519 RB6019 Rhodopirellula baltica SH 1 hypothetical protein NP_867027.1 3154198 R 243090 CDS NP_867028.1 32474034 1795036 complement(3154768..3155358) 1 NC_005027.1 best DB hits: BLAST: gb:AAB64177.1; (AF012345) beta-amylase [Hordeum vulgare]; E=0.71; hypothetical protein 3155358 1795036 RB6021 Rhodopirellula baltica SH 1 hypothetical protein NP_867028.1 3154768 R 243090 CDS NP_867029.1 32474035 1790435 complement(3155504..3158788) 1 NC_005027.1 best DB hits: PFAM: PF00404; Dockerin type I repeat; E=0.21 PF00160; Cyclophilin type peptidyl-proly; E=0.12; hypothetical protein 3158788 1790435 RB6025 Rhodopirellula baltica SH 1 hypothetical protein NP_867029.1 3155504 R 243090 CDS NP_867030.1 32474036 1790622 complement(3158845..3159012) 1 NC_005027.1 hypothetical protein 3159012 1790622 RB6030 Rhodopirellula baltica SH 1 hypothetical protein NP_867030.1 3158845 R 243090 CDS NP_867031.1 32474037 1791772 complement(3158984..3160462) 1 NC_005027.1 hypothetical protein 3160462 1791772 RB6031 Rhodopirellula baltica SH 1 hypothetical protein NP_867031.1 3158984 R 243090 CDS NP_867032.1 32474038 1794418 complement(3160459..3162768) 1 NC_005027.1 PMID: 7768349 best DB hits: BLAST: pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=2e-41 ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=9e-39 swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=8e-36 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=2e-42 PFAM: PF00069; Protein kinase domain; E=3.3e-46 PF00515; TPR Domain; E=0.1; serine/threonine protein kinase 3162768 1794418 RB6033 Rhodopirellula baltica SH 1 serine/threonine protein kinase NP_867032.1 3160459 R 243090 CDS NP_867033.1 32474039 1793644 complement(3162765..3163394) 1 NC_005027.1 PMID: 7751307 best DB hits: BLAST: swissprot:P44790; RPOE_HAEIN RNA POLYMERASE SIGMA-E FACTOR; E=1e-11 gb:AAK03873.1; (AE006215) RpoE [Pasteurella multocida]; E=3e-11 pir:C82583; RNA polymerase sigma-H factor XF2239 [imported] -; E=4e-10 COG: HI0628; COG1595 DNA-directed RNA polymerase specialized sigma; E=1e-12 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=0.0021; RNA polymerase sigma-E factor 3163394 1793644 RB6034 Rhodopirellula baltica SH 1 RNA polymerase sigma-E factor NP_867033.1 3162765 R 243090 CDS NP_867034.1 32474040 1793733 complement(3163372..3163548) 1 NC_005027.1 hypothetical protein 3163548 1793733 RB6037 Rhodopirellula baltica SH 1 hypothetical protein NP_867034.1 3163372 R 243090 CDS NP_867035.1 32474041 1795627 complement(3163457..3163678) 1 NC_005027.1 hypothetical protein 3163678 1795627 RB6038 Rhodopirellula baltica SH 1 hypothetical protein NP_867035.1 3163457 R 243090 CDS NP_867036.1 32474042 1795047 complement(3163887..3164828) 1 NC_005027.1 best DB hits: BLAST: pir:G82309; probable hemolysin VC0558 [imported] - Vibrio cholerae; E=4e-10 gb:AAG20419.1; (AE005114) hemolysin protein; Hlp [Halobacterium; E=6e-09 ddbj:BAA16497.1; (D90888) similar to [SwissProt Accession Number; E=9e-09 COG: VC0558; COG1253 Uncharacterized CBS domain-containing proteins; E=4e-11 PFAM: PF01595; Domain of unknown function DUF21; E=1.8e-17; hemolysin protein 3164828 1795047 RB6040 Rhodopirellula baltica SH 1 hemolysin protein NP_867036.1 3163887 R 243090 CDS NP_867037.1 32474043 1794623 complement(3164825..3166072) 1 NC_005027.1 best DB hits: BLAST: pir:G82309; probable hemolysin VC0558 [imported] - Vibrio cholerae; E=6e-19 gb:AAG20419.1; (AE005114) hemolysin protein; Hlp [Halobacterium; E=1e-16 ddbj:BAA16497.1; (D90888) similar to [SwissProt Accession Number; E=4e-16 COG: VC0558; COG1253 Uncharacterized CBS domain-containing proteins; E=6e-20 PFAM: PF01595; Domain of unknown function DUF2; E=0.00013 PF00571; CBS domain; E=0.0037; hemolysin protein 3166072 1794623 RB6042 Rhodopirellula baltica SH 1 hemolysin protein NP_867037.1 3164825 R 243090 CDS NP_867038.1 32474044 1796611 complement(3166069..3167952) 1 NC_005027.1 hypothetical protein 3167952 1796611 RB6045 Rhodopirellula baltica SH 1 hypothetical protein NP_867038.1 3166069 R 243090 CDS NP_867039.1 32474045 1790805 complement(3168042..3168851) 1 NC_005027.1 PMID: 2828368 PMID: 1316900 best DB hits: BLAST: gb:AAG42463.1; AF308468_4 (AF308468) APS kinase [Klebsiella; E=2e-48 swissprot:P23846; CYSC_ECOLI ADENYLYLSULFATE KINASE (APS KINASE); E=7e-47 pir:JN0328; adenylylsulfate kinase (EC 2.7.1.25) precursor -; E=3e-46 COG: cysC; COG0529 Adenylylsulfate kinase and related kinases; E=6e-48 PFAM: PF01121; Uncharacterized protein famil; E=0.34 PF00005; ABC transporter; E=0.021 PF00910; RNA helicase; E=0.052; adenylylsulfate kinase 3168851 cysC 1790805 cysC Rhodopirellula baltica SH 1 adenylylsulfate kinase NP_867039.1 3168042 R 243090 CDS NP_867040.1 32474046 1793445 complement(3168891..3170468) 1 NC_005027.1 hypothetical protein 3170468 1793445 RB6051 Rhodopirellula baltica SH 1 hypothetical protein NP_867040.1 3168891 R 243090 CDS NP_867041.1 32474047 1796667 complement(3170500..3171969) 1 NC_005027.1 PMID: 12024217 best DB hits: PFAM: PF00884; Sulfatase; E=0.34; sulfatase 3171969 1796667 RB6053 Rhodopirellula baltica SH 1 sulfatase NP_867041.1 3170500 R 243090 CDS NP_867042.1 32474048 1794725 complement(3171912..3175166) 1 NC_005027.1 hypothetical protein 3175166 1794725 RB6054 Rhodopirellula baltica SH 1 hypothetical protein NP_867042.1 3171912 R 243090 CDS NP_867043.1 32474049 1793835 complement(3175256..3176359) 1 NC_005027.1 PMID: 8997703 best DB hits: BLAST: pir:H70121; methanol dehydrogenase regulator (moxR) homolog - Lyme; E=3e-71 embl:CAA65298.1; (X96434) moxR [Borrelia burgdorferi] -----; E=9e-69 ddbj:BAB04450.1; (AP001509) BH0731~unknown conserved protein; E=3e-67 COG: BB0176; COG0714 MoxR-like ATPases; E=3e-72 PFAM: PF00004; ATPase associated with va; E=0.0005 PF01078; Magnesium chelatase, subunit Chl; E=1e-12; MoxR protein 3176359 moxR 1793835 moxR Rhodopirellula baltica SH 1 MoxR protein NP_867043.1 3175256 R 243090 CDS NP_867044.1 32474050 1790631 3176103..3178871 1 NC_005027.1 best DB hits: PFAM: PF00432; Prenyltransferase and squalene ox; E=0.69; hypothetical protein 3178871 1790631 RB6057 Rhodopirellula baltica SH 1 hypothetical protein NP_867044.1 3176103 D 243090 CDS NP_867045.1 32474051 1793074 complement(3178888..3180738) 1 NC_005027.1 PMID: 8083177 best DB hits: BLAST: gb:AAD56627.1; AF165218_2 (AF165218) Pgm [Streptococcus; E=2e-83 ddbj:BAB04825.1; (AP001510) phosphomannomutase [Bacillus; E=5e-79 swissprot:P18159; YHXB_BACSU PROBABLE PHOSPHOMANNOMUTASE (PMM); E=1e-77 COG: BH1106; COG1109 Phosphomannomutase; E=5e-80 VC2095; COG0033 Phosphoglucomutase; E=3e-11 PH0923; COG1109 Phosphomannomutase; E=5e-11 PFAM: PF02878; Phosphoglucomutase/phosphomannomu; E=1.6e-13 PF02880; Phosphoglucomutase/phosphomannomu; E=0.023 PF00408; Phosphoglucomutase/phosphomannomu; E=0.76; phosphomannomutase 3180738 pmm 1793074 pmm Rhodopirellula baltica SH 1 phosphomannomutase NP_867045.1 3178888 R 243090 CDS NP_867046.1 32474052 1791382 3180701..3180874 1 NC_005027.1 hypothetical protein 3180874 1791382 RB6062 Rhodopirellula baltica SH 1 hypothetical protein NP_867046.1 3180701 D 243090 CDS NP_867047.1 32474053 1791732 complement(3180908..3182005) 1 NC_005027.1 PMID: 8314774 best DB hits: BLAST: pir:S77053; magnesiumcobalt transport protein sll0671 -; E=7e-61 pir:S75981; magnesiumcobalt transport protein sll0507 -; E=2e-52 pir:H72360; divalent cation transport-related protein - Thermotoga; E=3e-51 COG: sll0671; COG0598 Mg2+ and Co2+ transporters; E=7e-62 PFAM: PF01544; CorA-like Mg2+ transporter protein; E=1.9e-79; magnesium/cobalt transport protein 3182005 corA 1791732 corA Rhodopirellula baltica SH 1 magnesium/cobalt transport protein NP_867047.1 3180908 R 243090 CDS NP_867048.1 32474054 1790065 complement(3182052..3185756) 1 NC_005027.1 PMID: 9573042 best DB hits: BLAST: ddbj:BAB06206.1; (AP001515) chromosome segregation SMC protein; E=1e-119 swissprot:P51834; SMC_BACSU CHROMOSOME PARTITION PROTEIN SMC -----; E=1e-106 pir:JC4819; minichromosome stabilizing protein SMC - Bacillus subtilis; E=1e-104 COG: BH2487; COG1196 Chromosome segregation ATPases; E=1e-120 PFAM: PF00005; ABC transporter; E=0.038 PF02463; SMC domain N terminal domain; E=5.4e-79 PF02371; Transposase IS116/IS110/IS902; E=0.65; chromosome partition protein Smc 3185756 smc 1790065 smc Rhodopirellula baltica SH 1 chromosome partition protein Smc NP_867048.1 3182052 R 243090 CDS NP_867049.1 32474055 1794526 complement(3185766..3186659) 1 NC_005027.1 hypothetical protein 3186659 1794526 RB6067 Rhodopirellula baltica SH 1 hypothetical protein NP_867049.1 3185766 R 243090 CDS NP_867050.1 32474056 1790959 3186811..3187416 1 NC_005027.1 PMID: 9358175 best DB hits: BLAST: pir:S74697; hypothetical protein sll1193 - Synechocystis sp. (strain; E=3e-23 pir:T36856; hypothetical protein SCI5.03 - Streptomyces coelicolor; E=4e-17 pir:H82621; hypothetical protein XF1912 [imported] - Xylella; E=5e-17 COG: sll1193; COG1403 Restriction endonuclease; E=3e-24 PFAM: PF01844; HNH endonuclease; E=9.6e-11; restriction endonuclease 3187416 1790959 RB6070 Rhodopirellula baltica SH 1 restriction endonuclease NP_867050.1 3186811 D 243090 CDS NP_867051.1 32474057 1795534 3187463..3188104 1 NC_005027.1 hypothetical protein 3188104 1795534 RB6071 Rhodopirellula baltica SH 1 hypothetical protein NP_867051.1 3187463 D 243090 CDS NP_867052.1 32474058 1794963 complement(3188416..3188607) 1 NC_005027.1 hypothetical protein 3188607 1794963 RB6073 Rhodopirellula baltica SH 1 hypothetical protein NP_867052.1 3188416 R 243090 CDS NP_867053.1 32474059 1791862 3188548..3190110 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: ddbj:BAB06714.1; (AP001517) BH2995~unknown conserved protein; E=2e-95 embl:CAB71916.1; (AL138668) secreted protein.; E=2e-90 embl:CAB71258.1; (AL138598) secreted protein.; E=1e-79 PFAM: PF02871; NAD/NADP octopine/nopaline dehy; E=0.52 PF00070; Pyridine nucleotide-disulphide; E=0.0043 PF02254; KTN NAD-binding domain; E=0.011; secreted protein 3190110 1791862 RB6075 Rhodopirellula baltica SH 1 secreted protein NP_867053.1 3188548 D 243090 CDS NP_867054.1 32474060 1795173 3190235..3190855 1 NC_005027.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor SigZ 3190855 1795173 RB6078 Rhodopirellula baltica SH 1 RNA polymerase sigma factor SigZ NP_867054.1 3190235 D 243090 CDS NP_867055.1 32474061 1793529 complement(3190877..3191035) 1 NC_005027.1 hypothetical protein 3191035 1793529 RB6081 Rhodopirellula baltica SH 1 hypothetical protein NP_867055.1 3190877 R 243090 CDS NP_867056.1 32474062 1793912 complement(3191045..3191533) 1 NC_005027.1 hypothetical protein 3191533 1793912 RB6084 Rhodopirellula baltica SH 1 hypothetical protein NP_867056.1 3191045 R 243090 CDS NP_867057.1 32474063 1790172 3191537..3191911 1 NC_005027.1 PMID: 11474104 best DB hits: BLAST: gb:AAD28577.1; AF121341_1 (AF121341) response regulator; E=0.038 pir:F82618; chemotaxis-related protein kinase XF1952 [imported] -; E=0.10 pir:S76044; hypothetical protein slr0322 - Synechocystis sp. (strain; E=0.10 PFAM: PF00072; Response regulator receiver doma; E=3.5e-05; response regulator 3191911 1790172 RB6087 Rhodopirellula baltica SH 1 response regulator NP_867057.1 3191537 D 243090 CDS NP_867058.1 32474064 1789996 3191913..3192383 1 NC_005027.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 3192383 panD 1789996 panD Rhodopirellula baltica SH 1 aspartate alpha-decarboxylase NP_867058.1 3191913 D 243090 CDS NP_867059.1 32474065 1794400 3192387..3193472 1 NC_005027.1 PMID: 11214968 best DB hits: BLAST: pir:C82445; hypothetical protein VCA0550 [imported] - Vibrio; E=0.16; hypothetical protein 3193472 1794400 RB6092 Rhodopirellula baltica SH 1 hypothetical protein NP_867059.1 3192387 D 243090 CDS NP_867060.1 32474066 1791114 3193586..3195553 1 NC_005027.1 PMID: 10484179 best DB hits: BLAST: ddbj:BAB04212.1; (AP001508) BH0493~unknown [Bacillus halodurans]; E=4e-12 gb:AAF77061.1; AF266466_3 (AF266466) hexuronic acid; E=0.003 gb:AAK05726.1; AE006393_5 (AE006393) glucuronate isomerase (EC; E=0.57; hypothetical protein 3195553 1791114 RB6095 Rhodopirellula baltica SH 1 hypothetical protein NP_867060.1 3193586 D 243090 CDS NP_867061.1 32474067 1794844 3195567..3195869 1 NC_005027.1 hypothetical protein 3195869 1794844 RB6097 Rhodopirellula baltica SH 1 hypothetical protein NP_867061.1 3195567 D 243090 CDS NP_867062.1 32474068 1794850 3195620..3195847 1 NC_005027.1 hypothetical protein 3195847 1794850 RB6098 Rhodopirellula baltica SH 1 hypothetical protein NP_867062.1 3195620 D 243090 CDS NP_867063.1 32474069 1793035 3195902..3198724 1 NC_005027.1 best DB hits: PFAM: PF02368; Bacterial Ig-like domain (group; E=0.091; hypothetical protein 3198724 1793035 RB6100 Rhodopirellula baltica SH 1 hypothetical protein NP_867063.1 3195902 D 243090 CDS NP_867064.1 32474070 1790314 3198799..3200118 1 NC_005027.1 PMID: 11823852; hypothetical protein 3200118 1790314 RB6101 Rhodopirellula baltica SH 1 hypothetical protein NP_867064.1 3198799 D 243090 CDS NP_867065.1 32474071 1791581 complement(3200237..3200968) 1 NC_005027.1 signal peptide 3200968 1791581 RB6102 Rhodopirellula baltica SH 1 signal peptide NP_867065.1 3200237 R 243090 CDS NP_867066.1 32474072 1793693 complement(3201184..3202683) 1 NC_005027.1 hypothetical protein 3202683 1793693 RB6104 Rhodopirellula baltica SH 1 hypothetical protein NP_867066.1 3201184 R 243090 CDS NP_867067.1 32474073 1790719 3202741..3202908 1 NC_005027.1 hypothetical protein 3202908 1790719 RB6106 Rhodopirellula baltica SH 1 hypothetical protein NP_867067.1 3202741 D 243090 CDS NP_867068.1 32474074 1795753 complement(3202928..3205048) 1 NC_005027.1 PMID: 10710307 best DB hits: BLAST: pir:B81207; hypothetical protein NMB0372 [imported] - Neisseria; E=0.016 pir:A81174; hypothetical protein NMB0655 [imported] - Neisseria; E=0.022 pir:B81783; hypothetical protein NMA2115 [imported] - Neisseria; E=0.070; hypothetical protein 3205048 1795753 RB6107 Rhodopirellula baltica SH 1 hypothetical protein NP_867068.1 3202928 R 243090 CDS NP_867069.1 32474075 1791571 complement(3204895..3208185) 1 NC_005027.1 best DB hits: PFAM: PF00515; TPR Domain; E=0.036; signal peptide 3208185 1791571 RB6108 Rhodopirellula baltica SH 1 signal peptide NP_867069.1 3204895 R 243090 CDS NP_867070.1 32474076 1792378 complement(3208246..3208854) 1 NC_005027.1 hypothetical protein 3208854 1792378 RB6112 Rhodopirellula baltica SH 1 hypothetical protein NP_867070.1 3208246 R 243090 CDS NP_867071.1 32474077 1791591 3208897..3210969 1 NC_005027.1 PMID: 8436954 best DB hits: BLAST: swissprot:Q03523; MURE_BACSU; E=2e-10 ddbj:BAB06290.1; (AP001515); E=4e-09 swissprot:O86491; MURE_STAAU; E=7e-09 COG: BS_murE; COG0769 UDP-N-acetylmuramyl tripeptide synthase; E=2e-11 XF0794; COG0770 UDP-N-acetylmuramyl pentapeptide synthase; E=1e-09 CPn0418; COG0769 UDP-N-acetylmuramyl tripeptide synthase; E=2e-06 PFAM: PF01225; Mur ligase, catalytic domai; E=0.0033 PF00023; Ank repeat; E=0.019; UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase 3210969 murE 1791591 murE Rhodopirellula baltica SH 1 UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase NP_867071.1 3208897 D 243090 CDS NP_867072.1 32474078 1796631 3210993..3211385 1 NC_005027.1 hypothetical protein 3211385 1796631 RB6119 Rhodopirellula baltica SH 1 hypothetical protein NP_867072.1 3210993 D 243090 CDS NP_867073.1 32474079 1790668 3211382..3214606 1 NC_005027.1 PMID: 8955385 best DB hits: BLAST: embl:CAB60199.1; (AJ250881) P1a6 protein [Haemonchus contortus]; E=5e-29 gb:AAB01192.1; (U55864) apical gut membrane polyprotein; E=8e-29 pir:T19607; hypothetical protein C31C9.1 - Caenorhabditis elegans; E=8e-27 COG: XF0820; COG2234 Predicted aminopeptidases; E=2e-11 RP302; COG0823 Periplasmic component of the Tol biopolymer transport; E=1e-07 PA0972; COG0823 Periplasmic component of the Tol biopolymer; E=2e-06 PFAM: PF02787; Carbamoyl-phosphate synthetase; E=0.2 PF01546; Peptidase M20/M25/M40; E=0.61 PF00595; PDZ domain (Also known as DHR o; E=0.017; TolB protein 3214606 tolB 1790668 tolB Rhodopirellula baltica SH 1 TolB protein NP_867073.1 3211382 D 243090 CDS NP_867074.1 32474080 1790826 3214603..3215520 1 NC_005027.1 hypothetical protein 3215520 1790826 RB6122 Rhodopirellula baltica SH 1 hypothetical protein NP_867074.1 3214603 D 243090 CDS NP_867075.1 32474081 1789968 3215597..3217891 1 NC_005027.1 PMID: 8760355 best DB hits: BLAST: pir:T34092; hypothetical protein C07A12.4 - Caenorhabditis elegans; E=0.071 pir:S71862; protein disulfide-isomerase (EC 5.3.4.1) precursor -; E=0.071 swissprot:P09103; PDI_MOUSE PROTEIN DISULFIDE ISOMERASE PRECURSOR; E=0.079; protein disulfide-isomerase 3217891 1789968 RB6123 Rhodopirellula baltica SH 1 protein disulfide-isomerase NP_867075.1 3215597 D 243090 CDS NP_867076.1 32474082 1794925 3217792..3219075 1 NC_005027.1 PMID: 9068650 best DB hits: BLAST: pir:T50546; riboflavin bifunctional biosynthesis protein ribG; E=2e-56 swissprot:P50853; RIBD_ACTPL RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBD; E=2e-56 ddbj:BAB05273.1; (AP001512) riboflavin specific; E=9e-52 COG: ribD_1; COG0117 Pyrimidine deaminase; E=1e-28 BH1554_2; COG1985 Pyrimidine reductase, riboflavin biosynthesis; E=6e-21 CPn0871_1; COG0117 Pyrimidine deaminase; E=1e-20 PFAM: PF00383; Cytidine and deoxycytidylate de; E=1.5e-31 PF01872; RibD C-terminal domain; E=4e-33; riboflavin bifunctional biosynthesis protein RibG 3219075 ribD 1794925 ribD Rhodopirellula baltica SH 1 riboflavin bifunctional biosynthesis protein RibG NP_867076.1 3217792 D 243090 CDS NP_867077.1 32474083 1796627 complement(3219093..3223592) 1 NC_005027.1 best DB hits: PFAM: PF01842; ACT domain; E=0.55 PF00515; TPR Domain; E=0.051; signal peptide 3223592 1796627 RB6127 Rhodopirellula baltica SH 1 signal peptide NP_867077.1 3219093 R 243090 CDS NP_867078.1 32474084 1794199 3223482..3223790 1 NC_005027.1 hypothetical protein 3223790 1794199 RB6131 Rhodopirellula baltica SH 1 hypothetical protein NP_867078.1 3223482 D 243090 CDS NP_867079.1 32474085 1795736 complement(3223715..3223891) 1 NC_005027.1 hypothetical protein 3223891 1795736 RB6132 Rhodopirellula baltica SH 1 hypothetical protein NP_867079.1 3223715 R 243090 CDS NP_867080.1 32474086 1796713 complement(3224012..3225232) 1 NC_005027.1 PMID: 3036807 best DB hits: BLAST: swissprot:P12045; PURK_BACSU PHOSPHORIBOSYLAMINOIMIDAZOLE; E=2e-59 embl:CAB45017.1; (AJ242839) phosphoribosylaminoimidazole; E=2e-58 ddbj:BAB04343.1; (AP001509) phosphoribosylaminoimidazole; E=2e-58 COG: BS_purK; COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR; E=2e-60 MJ1486; COG0027 Formate-dependent phosphoribosylglycinamide; E=1e-31 purK; COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR; E=2e-29 PFAM: PF02786; Carbamoyl-phosphate synthase; E=0.027 PF02222; ATP-grasp domain; E=3.7e-22 PF01820; D-ala D-ala ligase; E=0.65; phosphoribosylaminoimidazole carboxylase ATPase subunit 3225232 purK 1796713 purK Rhodopirellula baltica SH 1 phosphoribosylaminoimidazole carboxylase ATPase subunit NP_867080.1 3224012 R 243090 CDS NP_867081.1 32474087 1791863 complement(3225229..3225747) 1 NC_005027.1 PMID: 3036807 best DB hits: BLAST: swissprot:P12044; PUR6_BACSU PHOSPHORIBOSYLAMINOIMIDAZOLE; E=7e-47 ddbj:BAB04342.1; (AP001509) phosphoribosylaminoimidazole; E=9e-45 swissprot:O06456; PUR6_SULSO PHOSPHORIBOSYLAMINOIMIDAZOLE; E=9e-43 COG: BS_purE; COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; E=7e-48 YOR128c_2; COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR); E=7e-39 VC0052; COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; E=1e-38 PFAM: PF00731; AIR carboxylase; E=1.7e-82; phosphoribosylaminoimidazole carboxylase catalytic subunit (air carboxylase) (airc) 3225747 purE 1791863 purE Rhodopirellula baltica SH 1 phosphoribosylaminoimidazole carboxylase catalytic subunit (air carboxylase) (airc) NP_867081.1 3225229 R 243090 CDS NP_867082.1 32474088 1796011 complement(3225751..3226056) 1 NC_005027.1 hypothetical protein 3226056 1796011 RB6137 Rhodopirellula baltica SH 1 hypothetical protein NP_867082.1 3225751 R 243090 CDS NP_867083.1 32474089 1791958 3226050..3226613 1 NC_005027.1 PMID: 10484179 best DB hits: BLAST: ddbj:BAB05607.1; (AP001513) BH1888~unknown conserved protein; E=4e-06 swissprot:P54564; YQKA_BACSU HYPOTHETICAL 39.0 KD PROTEIN IN; E=9e-06 pir:C83045; hypothetical protein PA4798 [imported] - Pseudomonas; E=2e-04 COG: BH1888; COG2320 Uncharacterized BCR; E=4e-07; hypothetical protein 3226613 1791958 RB6139 Rhodopirellula baltica SH 1 hypothetical protein NP_867083.1 3226050 D 243090 CDS NP_867084.1 32474090 1790109 3226679..3227080 1 NC_005027.1 hypothetical protein 3227080 1790109 RB6141 Rhodopirellula baltica SH 1 hypothetical protein NP_867084.1 3226679 D 243090 CDS NP_867085.1 32474091 1796048 complement(3227094..3228131) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:B83093; probable oxidoreductase PA4434 [imported] - Pseudomonas; E=4e-54 pir:C82294; oxidoreductase Tas, aldoketo reductase VC0667; E=2e-53 gb:AAG57946.1; AE005512_5 (AE005512) orf, hypothetical protein; E=3e-51 COG: PA4434; COG0667 Predicted oxidoreductases (related to aryl-alcohol; E=4e-55 PFAM: PF00248; Aldo/keto reductase; E=2.5e-29; aldo/keto reductase oxidoreductase TAS 3228131 tas 1796048 tas Rhodopirellula baltica SH 1 aldo/keto reductase oxidoreductase TAS NP_867085.1 3227094 R 243090 CDS NP_867086.1 32474092 1792668 complement(3228189..3228305) 1 NC_005027.1 hypothetical protein 3228305 1792668 RB6144 Rhodopirellula baltica SH 1 hypothetical protein NP_867086.1 3228189 R 243090 CDS NP_867087.1 32474093 1796650 3228326..3229294 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:B83340; hypothetical protein PA2451 [imported] - Pseudomonas; E=9e-10 pir:A75265; ferric enterobactin esterase-related protein -; E=4e-05 swissprot:P10478; XYNZ_CLOTM ENDO-1,4-BETA-XYLANASE Z PRECURSOR; E=0.004 COG: PA2451; COG2382 Enterochelin esterase and related enzymes; E=9e-11; hypothetical protein 3229294 1796650 RB6145 Rhodopirellula baltica SH 1 hypothetical protein NP_867087.1 3228326 D 243090 CDS NP_867088.1 32474094 1793598 3229258..3230442 1 NC_005027.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 3230442 aroB 1793598 aroB Rhodopirellula baltica SH 1 3-dehydroquinate synthase NP_867088.1 3229258 D 243090 CDS NP_867089.1 32474095 1790812 3230464..3231369 1 NC_005027.1 best DB hits: BLAST: gb:AAB51777.1; (U69571) ORF993; upstream of trxA gene; E=0.81; hypothetical protein 3231369 1790812 RB6148 Rhodopirellula baltica SH 1 hypothetical protein NP_867089.1 3230464 D 243090 CDS NP_867090.1 32474096 1791753 3231428..3231595 1 NC_005027.1 hypothetical protein 3231595 1791753 RB6150 Rhodopirellula baltica SH 1 hypothetical protein NP_867090.1 3231428 D 243090 CDS NP_867091.1 32474097 1790319 complement(3231606..3232352) 1 NC_005027.1 PMID: 10978523; hypothetical protein 3232352 1790319 RB6151 Rhodopirellula baltica SH 1 hypothetical protein NP_867091.1 3231606 R 243090 CDS NP_867092.1 32474098 1794823 complement(3232418..3232576) 1 NC_005027.1 hypothetical protein 3232576 1794823 RB6154 Rhodopirellula baltica SH 1 hypothetical protein NP_867092.1 3232418 R 243090 CDS NP_867093.1 32474099 1792907 complement(3232485..3232658) 1 NC_005027.1 hypothetical protein 3232658 1792907 RB6155 Rhodopirellula baltica SH 1 hypothetical protein NP_867093.1 3232485 R 243090 CDS NP_867094.1 32474100 1792485 complement(3232622..3233026) 1 NC_005027.1 hypothetical protein 3233026 1792485 RB6156 Rhodopirellula baltica SH 1 hypothetical protein NP_867094.1 3232622 R 243090 CDS NP_867095.1 32474101 1796032 complement(3233104..3233532) 1 NC_005027.1 hypothetical protein 3233532 1796032 RB6158 Rhodopirellula baltica SH 1 hypothetical protein NP_867095.1 3233104 R 243090 CDS NP_867096.1 32474102 1791116 3233585..3233743 1 NC_005027.1 hypothetical protein 3233743 1791116 RB6160 Rhodopirellula baltica SH 1 hypothetical protein NP_867096.1 3233585 D 243090 CDS NP_867097.1 32474103 1793715 complement(3233881..3234375) 1 NC_005027.1 hypothetical protein 3234375 1793715 RB6162 Rhodopirellula baltica SH 1 hypothetical protein NP_867097.1 3233881 R 243090 CDS NP_867098.1 32474104 1792925 3234329..3234799 1 NC_005027.1 hypothetical protein 3234799 1792925 RB6163 Rhodopirellula baltica SH 1 hypothetical protein NP_867098.1 3234329 D 243090 CDS NP_867099.1 32474105 1795578 3235092..3235940 1 NC_005027.1 PMID: 9163424 best DB hits: BLAST: swissprot:P55632; Y4QK_RHISN INTEGRASERECOMBINASE Y4QK; E=7e-25 swissprot:P55429; Y4EF_RHISN INTEGRASERECOMBINASE Y4EF; E=5e-24 prf:2115270D; integrase [Weeksella zoohelcum]; E=4e-18 COG: PAB0255; COG0582 Integrase; E=1e-15 PFAM: PF00589; Phage integrase; E=2.6e-19; integrase/recombinase 3235940 1795578 RB6166 Rhodopirellula baltica SH 1 integrase/recombinase NP_867099.1 3235092 D 243090 CDS NP_867100.1 32474106 1790873 3235937..3237064 1 NC_005027.1 PMID: 9163424 best DB hits: BLAST: swissprot:P55631; Y4QJ_RHISN TRANSPOSASE Y4QJ -----; E=7e-39 prf:2115270C; transposase [Weeksella zoohelcum]; E=6e-35 pir:S23782; transposase tnpA (insertion sequence IS91) - Escherichia; E=5e-14; transposase 3237064 1790873 RB6167 Rhodopirellula baltica SH 1 transposase NP_867100.1 3235937 D 243090 CDS NP_867101.1 32474107 1795651 3236689..3237315 1 NC_005027.1 hypothetical protein 3237315 1795651 RB6168 Rhodopirellula baltica SH 1 hypothetical protein NP_867101.1 3236689 D 243090 CDS NP_867102.1 32474108 1793556 complement(3237422..3237976) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:F83333; hypothetical protein PA2504 [imported] - Pseudomonas; E=8e-11 pir:C81172; hypothetical protein NMB0685 [imported] - Neisseria; E=1e-10 pir:B81935; hypothetical protein NMA0887 [imported] - Neisseria; E=3e-10; hypothetical protein 3237976 1793556 RB6170 Rhodopirellula baltica SH 1 hypothetical protein NP_867102.1 3237422 R 243090 CDS NP_867103.1 32474109 1795210 complement(3238048..3239091) 1 NC_005027.1 PMID: 9163424 best DB hits: BLAST: swissprot:P55632; Y4QK_RHISN INTEGRASERECOMBINASE Y4QK; E=3e-35 prf:2115270D; integrase [Weeksella zoohelcum]; E=1e-34 swissprot:P55429; Y4EF_RHISN INTEGRASERECOMBINASE Y4EF; E=1e-33 COG: MTH893; COG0582 Integrase; E=9e-29 PFAM: PF00589; Phage integrase; E=4.2e-40; integrase/recombinase 3239091 1795210 RB6171 Rhodopirellula baltica SH 1 integrase/recombinase NP_867103.1 3238048 R 243090 CDS NP_867104.1 32474110 1790448 complement(3239311..3239520) 1 NC_005027.1 hypothetical protein 3239520 1790448 RB6172 Rhodopirellula baltica SH 1 hypothetical protein NP_867104.1 3239311 R 243090 CDS NP_867105.1 32474111 1792283 complement(3239525..3239734) 1 NC_005027.1 hypothetical protein 3239734 1792283 RB6174 Rhodopirellula baltica SH 1 hypothetical protein NP_867105.1 3239525 R 243090 CDS NP_867106.1 32474112 1793276 complement(3239748..3240125) 1 NC_005027.1 hypothetical protein 3240125 1793276 RB6175 Rhodopirellula baltica SH 1 hypothetical protein NP_867106.1 3239748 R 243090 CDS NP_867107.1 32474113 1793217 3240162..3240287 1 NC_005027.1 hypothetical protein 3240287 1793217 RB6178 Rhodopirellula baltica SH 1 hypothetical protein NP_867107.1 3240162 D 243090 CDS NP_867108.1 32474114 1795156 3240284..3240586 1 NC_005027.1 PMID: 12093901 best DB hits: BLAST: gb:AAG19264.1; (AE005022) Vng0801c [Halobacterium sp. NRC-1]; E=0.001 embl:CAC22924.1; (AL512963) hypothetical [Sulfolobus; E=0.005 gb:AAB89210.1; (AE000961) conserved hypothetical protein; E=0.006 COG: APE2154a; COG1826 Sec-independent protein secretion pathway; E=4e-05 PFAM: PF02416; mttA/Hcf106 family; E=6.2e-10; component of Sec-independent protein secretion pathway 3240586 1795156 RB6180 Rhodopirellula baltica SH 1 component of Sec-independent protein secretion pathway NP_867108.1 3240284 D 243090 CDS NP_867109.1 32474115 1795430 3240588..3240863 1 NC_005027.1 best DB hits: BLAST: gb:AAD31522.1; AF145755_1 (AF145755) THA4 [Zea mays]; E=0.46 PFAM: PF02416; mttA/Hcf106 family; E=1.6e-06; hypothetical protein 3240863 1795430 RB6184 Rhodopirellula baltica SH 1 hypothetical protein NP_867109.1 3240588 D 243090 CDS NP_867110.1 32474116 1796156 complement(3240869..3244093) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:F75417; L-sorbosone dehydrogenase - Deinococcus radiodurans; E=0.19 pir:C75617; probable oxidoreductase - Deinococcus radiodurans; E=0.35 embl:CAA53052.1; (X75304) giantin [Homo sapiens]; E=0.78 PFAM: PF00034; Cytochrome c; E=0.017 PF02736; Myosin N-terminal SH3-like domai; E=0.62; L-sorbosone dehydrogenase 3244093 1796156 RB6185 Rhodopirellula baltica SH 1 L-sorbosone dehydrogenase NP_867110.1 3240869 R 243090 CDS NP_867111.1 32474117 1792138 complement(3244178..3244384) 1 NC_005027.1 hypothetical protein 3244384 1792138 RB6188 Rhodopirellula baltica SH 1 hypothetical protein NP_867111.1 3244178 R 243090 CDS NP_867112.1 32474118 1794700 complement(3244395..3244529) 1 NC_005027.1 hypothetical protein 3244529 1794700 RB6189 Rhodopirellula baltica SH 1 hypothetical protein NP_867112.1 3244395 R 243090 CDS NP_867113.1 32474119 1790992 complement(3244532..3245911) 1 NC_005027.1 best DB hits: BLAST: embl:CAC24059.1; (AL512981) Hypothetical [Sulfolobus; E=0.17; hypothetical protein 3245911 1790992 RB6190 Rhodopirellula baltica SH 1 hypothetical protein NP_867113.1 3244532 R 243090 CDS NP_867114.1 32474120 1793343 complement(3245908..3246096) 1 NC_005027.1 hypothetical protein 3246096 1793343 RB6193 Rhodopirellula baltica SH 1 hypothetical protein NP_867114.1 3245908 R 243090 CDS NP_867115.1 32474121 1794259 complement(3245988..3246119) 1 NC_005027.1 hypothetical protein 3246119 1794259 RB6194 Rhodopirellula baltica SH 1 hypothetical protein NP_867115.1 3245988 R 243090 CDS NP_867116.1 32474122 1790006 complement(3246209..3247717) 1 NC_005027.1 PMID: 9736747 best DB hits: BLAST: gb:AAC13371.1; (U39940) choline sulfatase [Sinorhizobium; E=4e-30 swissprot:O69787; BETC_RHIME CHOLINE-SULFATASE; E=4e-30 gb:AAA16877.1; (L13329) iduronate-2-sulfatase [Homo sapiens]; E=2e-28 COG: PA0031; COG3119 Arylsulfatase A and related enzymes; E=4e-23 PA0924; COG3083 Predicted hydrolase of alkaline phosphatase; E=0.003 PFAM: PF00884; Sulfatase; E=7.4e-20; choline sulfatase 3247717 1790006 RB6196 Rhodopirellula baltica SH 1 choline sulfatase NP_867116.1 3246209 R 243090 CDS NP_867117.1 32474123 1794415 complement(3247889..3249025) 1 NC_005027.1 PMID: 8821935 best DB hits: BLAST: pir:S70672; dehydrogenase homolog - Bordetella pertussis -----; E=5e-50 gb:AAD45293.1; AF156256_1 (AF156256) dehydrogenase; E=3e-44 embl:CAC24056.1; (AL512981) Hypothetical-conserved [Sulfolobus; E=3e-43 COG: TM0585; COG0673 Predicted dehydrogenases and related proteins; E=2e-40 PFAM: PF01958; Domain of unknown function DUF; E=0.00025 PF01408; Oxidoreductase, NAD-bin; E=2.1e-40 PF02894; Oxidoreductase, C-termi; E=1.4e-16; dehydrogenase-like protein 3249025 1794415 RB6199 Rhodopirellula baltica SH 1 dehydrogenase-like protein NP_867117.1 3247889 R 243090 CDS NP_867118.1 32474124 1791827 3248886..3252431 1 NC_005027.1 PMID: 7584024 best DB hits: BLAST: swissprot:P37474; MFD_BACSU TRANSCRIPTION-REPAIR COUPLING FACTOR; E=0.0 gb:AAC98900.1; (AF023181) transcription-repair coupling factor; E=0.0 gb:AAD03810.1; (AF054624) transcription-repair coupling factor; E=1e-179 COG: BS_mfd; COG1197 Transcription-repair coupling factor - superfamily II; E=0.0 TM0205; COG1200 RecG-like helicases; E=4e-69 PFAM: PF00270; DEAD/DEAH box helicase; E=2.7e-27 PF00271; Helicase conserved C-terminal; E=5.3e-18; transcription-repair coupling factor 3252431 mfd 1791827 mfd Rhodopirellula baltica SH 1 transcription-repair coupling factor NP_867118.1 3248886 D 243090 CDS NP_867119.1 32474125 1793277 3252449..3253759 1 NC_005027.1 PMID: 9389475 best DB hits: BLAST: gb:AAB89850.1; (AE001008) conserved hypothetical protein; E=2e-05 swissprot:P54741; AFSK_STRCO SERINETHREONINE PROTEIN KINASE AFSK; E=0.064 embl:CAB88430.1; (AL353815) serinethreonine protein kinase; E=0.064 COG: AF1399; COG1520 Uncharacterized proteins of WD40-like repeat family; E=2e-06 PFAM: PF01011; PQQ enzyme repeat; E=0.47 PF02316; Mu DNA-binding domain; E=0.84; hypothetical protein 3253759 1793277 RB6207 Rhodopirellula baltica SH 1 hypothetical protein NP_867119.1 3252449 D 243090 CDS NP_867120.1 32474126 1794348 3253663..3254859 1 NC_005027.1 PMID: 8688087 best DB hits: BLAST: swissprot:Q58250; Y840_METJA HYPOTHETICAL PROTEIN MJ0840 -----; E=3e-29 pir:C69211; conserved hypothetical protein MTH834 - Methanobacterium; E=1e-24 gb:AAB90759.1; (AE001071) conserved hypothetical protein; E=8e-24 COG: MJ0840; COG1548 Predicted nucleotide-binding enzyme; E=2e-30 PFAM: PF00370; FGGY family of carbohydrate kinases,; E=0.78 PF01897; Protein of unknown function DUF66; E=8.5e-35; hypothetical protein 3254859 1794348 RB6209 Rhodopirellula baltica SH 1 hypothetical protein NP_867120.1 3253663 D 243090 CDS NP_867121.1 32474127 1795082 3254829..3255473 1 NC_005027.1 best DB hits: PFAM: PF00696; Amino acid kinase; E=0.24; hypothetical protein 3255473 1795082 RB6210 Rhodopirellula baltica SH 1 hypothetical protein NP_867121.1 3254829 D 243090 CDS NP_867122.1 32474128 1796636 complement(3255495..3257693) 1 NC_005027.1 PMID: 11474104 best DB hits: BLAST: embl:CAB53476.1; (AJ245900) CAA30373.1 protein [Oryza sativa]; E=0.023 pir:B70126; surface-located membrane protein 1 (lmp1) homolog - Lyme; E=0.091 gb:AAD05531.1; (AF083240) c-type cytochrome precursor [Shewanella; E=0.093 COG: BB0210; COG0457 TPR-repeat-containing proteins; E=0.008 PFAM: PF00515; TPR Domain; E=0.00026; hypothetical protein 3257693 1796636 RB6211 Rhodopirellula baltica SH 1 hypothetical protein NP_867122.1 3255495 R 243090 CDS NP_867123.1 32474129 1792203 3257871..3259133 1 NC_005027.1 PMID: 9537320 best DB hits: BLAST: swissprot:O66776; GLYA_AQUAE SERINE HYDROXYMETHYLTRANSFERASE; E=1e-135 swissprot:P39148; GLYA_BACSU SERINE HYDROXYMETHYLTRANSFERASE; E=1e-132 ddbj:BAB07484.1; (AP001519) serine hydroxymethyltransferase; E=1e-131 COG: aq_479; COG0112 Glycine hydroxymethyltransferase; E=1e-136 PFAM: PF00464; Serine hydroxymethyltransferase; E=7.9e-234; serine hydroxymethyltransferase (serine methylase SHMT) 3259133 glyA 1792203 glyA Rhodopirellula baltica SH 1 serine hydroxymethyltransferase (serine methylase SHMT) NP_867123.1 3257871 D 243090 CDS NP_867124.1 32474130 1794999 3259199..3259624 1 NC_005027.1 PMID: 10376842 best DB hits: BLAST: gb:AAD28578.1; AF121341_2 (AF121341) response regulator; E=7e-27 gb:AAA87378.1; (L42554) pleD gene product [Caulobacter; E=3e-21 pir:S74913; sensory transduction system regulatory protein slr1400 -; E=4e-21 COG: slr1400_1; COG0784 CheY-like receiver domains; E=4e-20 slr0115; COG0745 Response regulators consisting of a CheY-like; E=2e-19 VC0622_4; COG0784 CheY-like receiver domains; E=4e-19 PFAM: PF00072; Response regulator receiver doma; E=3.1e-37; response regulator 3259624 1794999 RB6217 Rhodopirellula baltica SH 1 response regulator NP_867124.1 3259199 D 243090 CDS NP_867125.1 32474131 1791684 3259575..3259775 1 NC_005027.1 hypothetical protein 3259775 1791684 RB6218 Rhodopirellula baltica SH 1 hypothetical protein NP_867125.1 3259575 D 243090 CDS NP_867126.1 32474132 1792492 3259826..3260908 1 NC_005027.1 hypothetical protein 3260908 1792492 RB6220 Rhodopirellula baltica SH 1 hypothetical protein NP_867126.1 3259826 D 243090 CDS NP_867127.1 32474133 1792011 complement(3260995..3264012) 1 NC_005027.1 PMID: 11759840; signal peptide 3264012 1792011 RB6221 Rhodopirellula baltica SH 1 signal peptide NP_867127.1 3260995 R 243090 CDS NP_867128.1 32474134 1790003 complement(3264080..3264211) 1 NC_005027.1 hypothetical protein 3264211 1790003 RB6225 Rhodopirellula baltica SH 1 hypothetical protein NP_867128.1 3264080 R 243090 CDS NP_867129.1 32474135 1793068 complement(3264248..3265393) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:D83026; conserved hypothetical protein PA4950 [imported] -; E=4e-52 swissprot:P39288; YJES_ECOLI HYPOTHETICAL 43.1 KD PROTEIN IN; E=1e-48 gb:AAG59362.1; AE005650_1 (AE005650) orf, hypothetical protein; E=2e-48 COG: PA4950; COG1600 Uncharacterized Fe-S protein; E=4e-53 PFAM: PF00037; 4Fe-4S binding domain; E=0.026; (Fe-S)-binding protein 3265393 1793068 RB6226 Rhodopirellula baltica SH 1 (Fe-S)-binding protein NP_867129.1 3264248 R 243090 CDS NP_867130.1 32474136 1795052 complement(3265390..3267153) 1 NC_005027.1 best DB hits: BLAST: pir:T37039; hypothetical protein SCJ12.22 - Streptomyces coelicolor; E=6e-05 swissprot:P39066; ACUB_BACSU ACETOIN UTILIZATION ACUB PROTEIN; E=0.016 pir:T36952; conserved hypothetical protein SCJ1.19c - Streptomyces; E=0.021 COG: BS_acuB; COG0517 CBS domains; E=0.002 PFAM: PF00999; Sodium/hydrogen exchanger fami; E=0.024 PF00571; CBS domain; E=0.00084; hypothetical protein 3267153 1795052 RB6227 Rhodopirellula baltica SH 1 hypothetical protein NP_867130.1 3265390 R 243090 CDS NP_867131.1 32474137 1795419 complement(3267331..3269295) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAA89783.1; (AB037133) IRE [Arabidopsis thaliana] -----; E=0.25; IRE (iron responsive element) 3269295 1795419 RB6230 Rhodopirellula baltica SH 1 IRE (iron responsive element) NP_867131.1 3267331 R 243090 CDS NP_867132.1 32474138 1795230 complement(3269292..3271181) 1 NC_005027.1 hypothetical protein 3271181 1795230 RB6233 Rhodopirellula baltica SH 1 hypothetical protein NP_867132.1 3269292 R 243090 CDS NP_867133.1 32474139 1791436 complement(3271178..3272203) 1 NC_005027.1 PMID: 8590279 best DB hits: BLAST: swissprot:P22040; Y415_SYNY3 HYPOTHETICAL ABC TRANSPORTER; E=8e-56 gb:AAC36155.1; (AF003632) PilH [Myxococcus xanthus]; E=1e-48 pir:A39025; probable membrane protein, cpn60 5'-region -; E=7e-47 COG: sll0415; COG1131 ABC-type multidrug transport system, ATPase; E=7e-57 PFAM: PF00005; ABC transporter; E=1.4e-59; ABC transporter ATP-binding protein 3272203 1791436 RB6236 Rhodopirellula baltica SH 1 ABC transporter ATP-binding protein NP_867133.1 3271178 R 243090 CDS NP_867134.1 32474140 1790211 3272353..3273984 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: pir:D72411; folylpolyglutamate synthasedihydrofolate synthase -; E=4e-40 ddbj:BAB06756.1; (AP001517) folyl-polyglutamate synthetase; E=8e-39 swissprot:Q05865; FOLC_BACSU FOLYLPOLYGLUTAMATE SYNTHASE; E=8e-38 COG: TM0166; COG0285 Folylpolyglutamate synthase; E=4e-41 PFAM: PF01225; Mur ligase, catalytic dom; E=1.6e-13 PF02875; Mur ligase, glutamate lig; E=0.00031; folylpolyglutamate synthase/dihydrofolate synthase 3273984 folC 1790211 folC Rhodopirellula baltica SH 1 folylpolyglutamate synthase/dihydrofolate synthase NP_867134.1 3272353 D 243090 CDS NP_867135.1 32474141 1792066 complement(3273915..3275111) 1 NC_005027.1 PMID: 10952301 best DB hits: BLAST: pir:F82343; conserved hypothetical protein VC0271 [imported] -; E=3e-57 swissprot:P74078; YC54_SYNY3 HYPOTHETICAL 38.3 KD PROTEIN SLL1254; E=9e-39 gb:AAG20419.1; (AE005114) hemolysin protein; Hlp [Halobacterium; E=8e-17 COG: VC0271; COG1253 Uncharacterized CBS domain-containing proteins; E=3e-58 PFAM: PF01595; Domain of unknown function DUF21; E=2.1e-20 PF00571; CBS domain; E=0.0002; hypothetical protein 3275111 1792066 RB6238 Rhodopirellula baltica SH 1 hypothetical protein NP_867135.1 3273915 R 243090 CDS NP_867136.1 32474142 1792249 complement(3275123..3275302) 1 NC_005027.1 hypothetical protein 3275302 1792249 RB6239 Rhodopirellula baltica SH 1 hypothetical protein NP_867136.1 3275123 R 243090 CDS NP_867137.1 32474143 1795888 3275350..3276192 1 NC_005027.1 PMID: 10484179 best DB hits: BLAST: ddbj:BAB06210.1; (AP001515) 3-oxoacyl-(acyl-carrier protein); E=1e-17 pir:H75014; 3-oxoacyl-[acyl-carrier-protein] reductase PAB1085 -; E=3e-16 gb:AAK04872.1; AE006311_3 (AE006311) 3-oxoacyl-acyl carrier; E=9e-14 COG: BH2491; COG1028 Dehydrogenases with different specificities (related; E=1e-18 PAB1085; COG1028 Dehydrogenases with different specificities; E=3e-17 DR1943; COG1028 Dehydrogenases with different specificities (related; E=2e-13 PFAM: PF00106; short chain dehydrogenase; E=4.2e-11 PF00678; Short chain dehydrogenase/reduct; E=1.3e-06; 3-oxoacyl-ACP reductase 3276192 fabG 1795888 fabG Rhodopirellula baltica SH 1 3-oxoacyl-ACP reductase NP_867137.1 3275350 D 243090 CDS NP_867138.1 32474144 1793895 complement(3276131..3277327) 1 NC_005027.1 PMID: 10484179 best DB hits: BLAST: ddbj:BAB06407.1; (AP001516); E=4e-06 pir:G70961; probable hexosyltransferase (EC 2.4.1.-) Rv0225; E=2e-04 gb:AAF14309.1; (U45308) SqdX [Synechococcus sp. PCC 7942]; E=4e-04 COG: BH2688; COG0438 Predicted glycosyltransferases; E=3e-07 PFAM: PF00534; Glycosyl transferases group 1; E=4.6e-08; hexosyltransferase 3277327 1793895 RB6241 Rhodopirellula baltica SH 1 hexosyltransferase NP_867138.1 3276131 R 243090 CDS NP_867139.1 32474145 1793855 complement(3277324..3278667) 1 NC_005027.1 hypothetical protein 3278667 1793855 RB6242 Rhodopirellula baltica SH 1 hypothetical protein NP_867139.1 3277324 R 243090 CDS NP_867140.1 32474146 1790798 3278647..3278907 1 NC_005027.1 hypothetical protein 3278907 1790798 RB6243 Rhodopirellula baltica SH 1 hypothetical protein NP_867140.1 3278647 D 243090 CDS NP_867141.1 32474147 1794887 complement(3278695..3278979) 1 NC_005027.1 hypothetical protein 3278979 1794887 RB6244 Rhodopirellula baltica SH 1 hypothetical protein NP_867141.1 3278695 R 243090 CDS NP_867142.1 32474148 1790503 3278762..3279085 1 NC_005027.1 hypothetical protein 3279085 1790503 RB6245 Rhodopirellula baltica SH 1 hypothetical protein NP_867142.1 3278762 D 243090 CDS NP_867143.1 32474149 1792192 3279082..3280233 1 NC_005027.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 3280233 serC 1792192 serC Rhodopirellula baltica SH 1 phosphoserine aminotransferase NP_867143.1 3279082 D 243090 CDS NP_867144.1 32474150 1791083 3280282..3281904 1 NC_005027.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 3281904 serA 1791083 serA Rhodopirellula baltica SH 1 D-3-phosphoglycerate dehydrogenase NP_867144.1 3280282 D 243090 CDS NP_867145.1 32474151 1795078 3282079..3282186 1 NC_005027.1 hypothetical protein 3282186 1795078 RB6250 Rhodopirellula baltica SH 1 hypothetical protein NP_867145.1 3282079 D 243090 CDS NP_867146.1 32474152 1794321 complement(3282200..3284317) 1 NC_005027.1 hypothetical protein 3284317 1794321 RB6251 Rhodopirellula baltica SH 1 hypothetical protein NP_867146.1 3282200 R 243090 CDS NP_867147.1 32474153 1792764 complement(3284503..3285573) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:B75596; mannose-1-phosphate guanylyltransferase - Deinococcus; E=5e-67 pir:S75700; GDP-mannose pyrophosphorylase - Synechocystis sp.; E=9e-59 ddbj:BAB03201.1; (AB046360) GOP-mannose phosphorylase; E=2e-52 COG: DRA0032; COG0836 Mannose-1-phosphate guanylyltransferase; E=5e-68 PFAM: PF01128; Uncharacterized protein famil; E=0.27 PF00483; Nucleotidyl transferase; E=1.8e-54 PF01050; Mannose-6-phosphate isomerase; E=3.3e-05; mannose-1-phosphate guanylyltransferase 3285573 manC 1792764 manC Rhodopirellula baltica SH 1 mannose-1-phosphate guanylyltransferase NP_867147.1 3284503 R 243090 CDS NP_867148.1 32474154 1793456 complement(3285625..3287961) 1 NC_005027.1 best DB hits: BLAST: gb:AAD05534.1; (AF083240) deca-heme c-type cytochrome [Shewanella; E=4e-04 gb:AAD05531.1; (AF083240) c-type cytochrome precursor [Shewanella; E=4e-04 swissprot:P32707; NRFB_ECOLI CYTOCHROME C-TYPE PROTEIN NRFB; E=0.029 COG: MTH83; COG0457 TPR-repeat-containing proteins; E=0.007 PFAM: PF00515; TPR Domain; E=0.014; deca-heme c-type cytochrome 3287961 1793456 RB6255 Rhodopirellula baltica SH 1 deca-heme c-type cytochrome NP_867148.1 3285625 R 243090 CDS NP_867149.1 32474155 1792023 complement(3288043..3288666) 1 NC_005027.1 hypothetical protein 3288666 1792023 RB6257 Rhodopirellula baltica SH 1 hypothetical protein NP_867149.1 3288043 R 243090 CDS NP_867150.1 32474156 1792087 complement(3288663..3289493) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:G83274; probable tolQ-type transport protein PA2983 [imported] -; E=1e-15 pir:D82726; conserved hypothetical protein XF1079 [imported] -; E=4e-10 gb:AAC69453.1; (AF047974) TolR [Vibrio cholerae]; E=1e-09 COG: PA2983; COG0811 Biopolymer transport proteins; E=1e-16 PFAM: PF01618; MotA/TolQ/ExbB proton channel famil; E=1.9e-20; TolQ-type transport protein 3289493 tolQ 1792087 tolQ Rhodopirellula baltica SH 1 TolQ-type transport protein NP_867150.1 3288663 R 243090 CDS NP_867151.1 32474157 1796204 complement(3289490..3291310) 1 NC_005027.1 hypothetical protein 3291310 1796204 RB6263 Rhodopirellula baltica SH 1 hypothetical protein NP_867151.1 3289490 R 243090 CDS NP_867152.1 32474158 1791872 complement(3291307..3293502) 1 NC_005027.1 hypothetical protein 3293502 1791872 RB6266 Rhodopirellula baltica SH 1 hypothetical protein NP_867152.1 3291307 R 243090 CDS NP_867153.1 32474159 1791651 complement(3293581..3294798) 1 NC_005027.1 PMID: 11058132 best DB hits: BLAST: swissprot:Q9KDV3; GALE_BACHD UDP-GLUCOSE 4-EPIMERASE; E=9e-99 pir:A69184; UDP-glucose 4-epimerase - Methanobacterium; E=3e-98 gb:AAK06077.1; AE006428_1 (AE006428) UDP-glucose 4-epimerase (EC; E=2e-93 COG: BH1108; COG1087 UDP-glucose 4-epimerase; E=1e-100 TM0509; COG0451 Nucleoside-diphosphate-sugar epimerases; E=9e-41 MPN257; COG1087 UDP-glucose 4-epimerase; E=6e-38 PFAM: PF02716; Isoflavone reductase; E=0.13 PF02254; KTN NAD-binding domain; E=0.22 PF00984; UDP-glucose/GDP-mannose dehyd; E=0.0085; UDP-glucose 4-epimerase 3294798 galE 1791651 galE Rhodopirellula baltica SH 1 UDP-glucose 4-epimerase NP_867153.1 3293581 R 243090 CDS NP_867154.1 32474160 1793810 3294814..3295791 1 NC_005027.1 PMID: 10484179 best DB hits: BLAST: ddbj:BAB05248.1; (AP001512) integraserecombinase [Bacillus; E=1e-56 swissprot:P46352; RIPX_BACSU PROBABLE INTEGRASERECOMBINASE RIPX; E=1e-54 pir:A82080; integraserecombinase XerD VC2419 [imported] - Vibrio; E=5e-53 COG: BH1529; COG0582 Integrase; E=1e-57 PFAM: PF02899; Phage integrase, N-terminal S; E=1.8e-20 PF00589; Phage integrase; E=1.6e-50; integrase/recombinase 3295791 1793810 RB6271 Rhodopirellula baltica SH 1 integrase/recombinase NP_867154.1 3294814 D 243090 CDS NP_867155.2 161579032 1792472 complement(3295807..3296844) 1 NC_005027.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 3296844 fabH 1792472 fabH Rhodopirellula baltica SH 1 3-oxoacyl-ACP synthase NP_867155.2 3295807 R 243090 CDS NP_867156.1 32474162 1795203 complement(3296951..3297130) 1 NC_005027.1 hypothetical protein 3297130 1795203 RB6274 Rhodopirellula baltica SH 1 hypothetical protein NP_867156.1 3296951 R 243090 CDS NP_867157.1 32474163 1793535 complement(3297187..3297504) 1 NC_005027.1 PMID: 10910347 best DB hits: BLAST: pir:D82620; histone-like protein XF1943 [imported] - Xylella; E=4e-14 pir:JC6029; histone H1 homolog - Bordetella pertussis ----- gb:; E=4e-13 ddbj:BAB05028.1; (AP001511) non-specific DNA-binding protein II; E=3e-05 COG: BH1309; COG0776 Bacterial nucleoid DNA-binding protein; E=3e-06 PFAM: PF00216; Bacterial DNA-binding protein; E=7.4e-07; DNA-binding protein HU 3297504 hup 1793535 hup Rhodopirellula baltica SH 1 DNA-binding protein HU NP_867157.1 3297187 R 243090 CDS NP_867158.1 32474164 1796639 complement(3297678..3302303) 1 NC_005027.1 PMID: 7584044 best DB hits: BLAST: ddbj:BAA07555.1; (D38552) The ha1539 protein is related to; E=1e-19 gb:AAF58019.1; (AE003807) CG7747 gene product [Drosophila; E=2e-18 pir:T48940; hypothetical protein F14L2.150 - Arabidopsis thaliana; E=4e-18 COG: VNG1914G; COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) -; E=3e-15 PFAM: PF00160; Cyclophilin type peptidyl-prol; E=6.4e-32; cyclophilin type peptidyl-prolyl cis-trans isomerase 3302303 1796639 RB6278 Rhodopirellula baltica SH 1 cyclophilin type peptidyl-prolyl cis-trans isomerase NP_867158.1 3297678 R 243090 CDS NP_867159.1 32474165 1790846 3302547..3302903 1 NC_005027.1 hypothetical protein 3302903 1790846 RB6281 Rhodopirellula baltica SH 1 hypothetical protein NP_867159.1 3302547 D 243090 CDS NP_867160.1 32474166 1792329 3302795..3303397 1 NC_005027.1 hypothetical protein 3303397 1792329 RB6282 Rhodopirellula baltica SH 1 hypothetical protein NP_867160.1 3302795 D 243090 CDS NP_867161.1 32474167 1793450 complement(3303404..3303589) 1 NC_005027.1 hypothetical protein 3303589 1793450 RB6283 Rhodopirellula baltica SH 1 hypothetical protein NP_867161.1 3303404 R 243090 CDS NP_867162.1 32474168 1794833 complement(3303599..3304945) 1 NC_005027.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 3304945 sahH 1794833 sahH Rhodopirellula baltica SH 1 S-adenosyl-L-homocysteine hydrolase NP_867162.1 3303599 R 243090 CDS NP_867163.1 32474169 1794863 3304962..3305303 1 NC_005027.1 hypothetical protein 3305303 1794863 RB6286 Rhodopirellula baltica SH 1 hypothetical protein NP_867163.1 3304962 D 243090 CDS NP_867164.1 32474170 1791290 3305300..3307852 1 NC_005027.1 signal peptide 3307852 1791290 RB6288 Rhodopirellula baltica SH 1 signal peptide NP_867164.1 3305300 D 243090 CDS NP_867165.1 32474171 1795241 complement(3307849..3308577) 1 NC_005027.1 best DB hits: BLAST: pir:T45716; hypothetical protein F1P2.110 - Arabidopsis thaliana; E=4e-07 gb:AAG10612.1; AC008030_12 (AC008030) Unknown protein [Arabidopsis; E=1e-05 gb:AAD10154.1; (AC005917) esterase [Arabidopsis; E=1e-05 COG: XF1829; COG2945 Predicted hydrolase of the alpha/beta superfamily; E=6e-06 CT149; COG1073 Hydrolases of the alpha/beta superfamily; E=0.008 PFAM: PF00561; alpha/beta hydrolase fold; E=0.0058 PF00293; MutT-like domain; E=0.7; hydrolase 3308577 1795241 RB6289 Rhodopirellula baltica SH 1 hydrolase NP_867165.1 3307849 R 243090 CDS NP_867166.1 32474172 1795316 complement(3308706..3309743) 1 NC_005027.1 PMID: 10484179 best DB hits: BLAST: swissprot:P54466; YQFA_BACSU HYPOTHETICAL 35.6 KD PROTEIN IN; E=7e-57 embl:CAA12151.1; (AJ224829) ORF1 [Bacillus megaterium]; E=2e-54 ddbj:BAB05076.1; (AP001511) BH1357~unknown conserved protein in; E=3e-54; hypothetical protein 3309743 1795316 RB6291 Rhodopirellula baltica SH 1 hypothetical protein NP_867166.1 3308706 R 243090 CDS NP_867167.1 32474173 1794601 complement(3309876..3310694) 1 NC_005027.1 PMID: 8688087 best DB hits: BLAST: swissprot:Q58114; Y703_METJA HYPOTHETICAL PROTEIN MJ0703 -----; E=9e-14 gb:AAG32955.1; (AF032114) unknown [Methylobacterium extorquens]; E=6e-07 pir:A69189; phosphoribosylformimino-5-aminoimidazole carboxamide; E=4e-05 COG: MJ0703; COG1411 Archaeal family of HisA paralogs; E=9e-15; hypothetical protein 3310694 1794601 RB6292 Rhodopirellula baltica SH 1 hypothetical protein NP_867167.1 3309876 R 243090 CDS NP_867168.1 32474174 1795823 complement(3310691..3311119) 1 NC_005027.1 hypothetical protein 3311119 1795823 RB6296 Rhodopirellula baltica SH 1 hypothetical protein NP_867168.1 3310691 R 243090 CDS NP_867169.1 32474175 1791021 3311120..3311431 1 NC_005027.1 hypothetical protein 3311431 1791021 RB6298 Rhodopirellula baltica SH 1 hypothetical protein NP_867169.1 3311120 D 243090 CDS NP_867170.1 32474176 1794187 3311474..3312100 1 NC_005027.1 best DB hits: BLAST: swissprot:P20576; TRPG_PSEAE ANTHRANILATE SYNTHASE COMPONENT II; E=1e-60 pir:A35114; trpG protein - Pseudomonas aeruginosa ----- gb:; E=1e-60 pir:NNPS2P; anthranilate synthase (EC 4.1.3.27) component II; E=2e-59 COG: PA0649; COG0512 Anthranilate/para-aminobenzoate synthases component; E=1e-61 pabA; COG0512 Anthranilate/para-aminobenzoate synthases component II; E=3e-56 BS_pabA; COG0512 Anthranilate/para-aminobenzoate synthases component; E=2e-55 PFAM: PF00117; Glutamine amidotransferase class-I; E=2.5e-68; anthranilate synthase component II (glutamine amido-transferase) 3312100 trpG 1794187 trpG Rhodopirellula baltica SH 1 anthranilate synthase component II (glutamine amido-transferase) NP_867170.1 3311474 D 243090 CDS NP_867171.1 32474177 1792431 complement(3312186..3312701) 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: pir:H72286; conserved hypothetical protein - Thermotoga maritima; E=5e-22 swissprot:P54570; ADPP_BACSU ADP-RIBOSE PYROPHOSPHATASE; E=3e-21 ddbj:BAB05243.1; (AP001512) BH1524~unknown conserved protein; E=3e-19 COG: TM1181; COG0494 NTP pyrophosphohydrolases including oxidative damage; E=5e-23 BS_yqkG; COG0494 NTP pyrophosphohydrolases including oxidative; E=3e-22 BH1524; COG0494 NTP pyrophosphohydrolases including oxidative damage; E=3e-20 PFAM: PF00293; MutT-like domain; E=3.7e-13; ADP-ribose pyrophosphatase 3312701 1792431 RB6302 Rhodopirellula baltica SH 1 ADP-ribose pyrophosphatase NP_867171.1 3312186 R 243090 CDS NP_867172.1 32474178 1794479 3312700..3312900 1 NC_005027.1 hypothetical protein 3312900 1794479 RB6304 Rhodopirellula baltica SH 1 hypothetical protein NP_867172.1 3312700 D 243090 CDS NP_867173.1 32474179 1793273 3312842..3314155 1 NC_005027.1 PMID: 9537320 best DB hits: BLAST: pir:G70463; dolichol-phosphate mannosyltransferase - Aquifex; E=3e-52 pir:D83201; probable glycosyl transferase PA3553 [imported] -; E=3e-37 gb:AAG57385.1; AE005458_2 (AE005458) sugar transferase; E=2e-36 COG: aq_1899; COG0463 Glycosyltransferases involved in cell wall; E=3e-53 yfbF; COG0463 Glycosyltransferases involved in cell wall biogenesis; E=3e-37 sll0501; COG0463 Glycosyltransferases involved in cell wall; E=1e-23 PFAM: PF00535; Glycosyl transferase; E=1.1e-24; dolichol-phosphate mannosyltransferase 3314155 1793273 RB6305 Rhodopirellula baltica SH 1 dolichol-phosphate mannosyltransferase NP_867173.1 3312842 D 243090 CDS NP_867174.1 32474180 1792898 3314118..3315779 1 NC_005027.1 hypothetical protein 3315779 1792898 RB6307 Rhodopirellula baltica SH 1 hypothetical protein NP_867174.1 3314118 D 243090 CDS NP_867175.1 32474181 1793919 3315801..3319265 1 NC_005027.1 hypothetical protein 3319265 1793919 RB6310 Rhodopirellula baltica SH 1 hypothetical protein NP_867175.1 3315801 D 243090 CDS NP_867176.1 32474182 1792772 3319320..3319478 1 NC_005027.1 hypothetical protein 3319478 1792772 RB6314 Rhodopirellula baltica SH 1 hypothetical protein NP_867176.1 3319320 D 243090 CDS NP_867177.1 32474183 1792015 complement(3319455..3320228) 1 NC_005027.1 PMID: 8264528 best DB hits: BLAST: gb:AAK00179.1; AF222754_7 (AF222754) probable nodulation protein; E=5e-08 pir:S39902; nwsB protein - Bradyrhizobium japonicum ----- embl:; E=5e-07 prf:2009374B; NwsB protein [Bradyrhizobium japonicum]; E=5e-07 COG: PA4196; COG2197 Response regulators consisting of a CheY-like; E=1e-05 PFAM: PF01726; LexA DNA binding domain; E=0.74 PF00196; Bacterial regulatory proteins,; E=1.4e-12; response-regulator 3320228 1792015 RB6315 Rhodopirellula baltica SH 1 response-regulator NP_867177.1 3319455 R 243090 CDS NP_867178.1 32474184 1794071 complement(3320303..3320536) 1 NC_005027.1 hypothetical protein 3320536 1794071 RB6319 Rhodopirellula baltica SH 1 hypothetical protein NP_867178.1 3320303 R 243090 CDS NP_867179.1 32474185 1794349 3320376..3320570 1 NC_005027.1 hypothetical protein 3320570 1794349 RB6320 Rhodopirellula baltica SH 1 hypothetical protein NP_867179.1 3320376 D 243090 CDS NP_867180.1 32474186 1795093 3320563..3320790 1 NC_005027.1 hypothetical protein 3320790 1795093 RB6322 Rhodopirellula baltica SH 1 hypothetical protein NP_867180.1 3320563 D 243090 CDS NP_867181.1 32474187 1794722 3320754..3320930 1 NC_005027.1 hypothetical protein 3320930 1794722 RB6323 Rhodopirellula baltica SH 1 hypothetical protein NP_867181.1 3320754 D 243090 CDS NP_867182.1 32474188 1792029 complement(3321074..3321442) 1 NC_005027.1 hypothetical protein 3321442 1792029 RB6324 Rhodopirellula baltica SH 1 hypothetical protein NP_867182.1 3321074 R 243090 CDS NP_867183.1 32474189 1791364 complement(3321473..3321688) 1 NC_005027.1 hypothetical protein 3321688 1791364 RB6325 Rhodopirellula baltica SH 1 hypothetical protein NP_867183.1 3321473 R 243090 CDS NP_867184.1 32474190 1794507 3321757..3322500 1 NC_005027.1 PMID: 10617197 best DB hits: BLAST: ddbj:BAA98195.1; (AP002030) short chain alcohol; E=7e-21 gb:AAC95219.1; (AC004561) tropinone reductase; E=5e-20 gb:AAC95202.1; (AC004561) tropinone reductase; E=1e-19 COG: TM1724; COG1028 Dehydrogenases with different specificities (related; E=4e-19 VNG1341G; COG1028 Dehydrogenases with different specificities; E=2e-16 TM0441; COG1028 Dehydrogenases with different specificities (related; E=1e-15 PFAM: PF00899; ThiF family; E=0.21 PF02254; KTN NAD-binding domain; E=0.066 PF00106; short chain dehydrogenase; E=3.9e-28; short chain alcohol dehydrogenase-like 3322500 1794507 RB6327 Rhodopirellula baltica SH 1 short chain alcohol dehydrogenase-like NP_867184.1 3321757 D 243090 CDS NP_867185.1 32474191 1794197 complement(3322486..3323052) 1 NC_005027.1 PMID: 9371463 best DB hits: BLAST: pir:F69084; conserved hypothetical protein MTH1629 -; E=1e-20 pir:C71193; hypothetical protein PH1819 - Pyrococcus horikoshii; E=8e-18 swissprot:Q57692; Y240_METJA HYPOTHETICAL PROTEIN MJ0240 -----; E=1e-17 COG: MTH1629; COG1437 Adenylate cyclase, class 2 (thermophilic); E=1e-21 PFAM: PF01928; Adenylate cyclase; E=2.9e-45; adenylyl cyclase 3323052 1794197 RB6328 Rhodopirellula baltica SH 1 adenylyl cyclase NP_867185.1 3322486 R 243090 CDS NP_867186.1 32474192 1795022 complement(3323121..3324008) 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAC08313.1; (AL392149) integral membrane protein; E=8e-05; hypothetical protein 3324008 1795022 RB6330 Rhodopirellula baltica SH 1 hypothetical protein NP_867186.1 3323121 R 243090 CDS NP_867187.1 32474193 1792452 complement(3324024..3325151) 1 NC_005027.1 catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate; thiamine-phosphate pyrophosphorylase 3325151 thiE 1792452 thiE Rhodopirellula baltica SH 1 thiamine-phosphate pyrophosphorylase NP_867187.1 3324024 R 243090 CDS NP_867188.1 32474194 1795964 3325222..3325974 1 NC_005027.1 PMID: 9628582 best DB hits: BLAST: ddbj:BAB10862.1; (AB009053) contains similarity to isoamyl; E=0.074; hypothetical protein 3325974 1795964 RB6332 Rhodopirellula baltica SH 1 hypothetical protein NP_867188.1 3325222 D 243090 CDS NP_867189.1 32474195 1795481 3325971..3326081 1 NC_005027.1 hypothetical protein 3326081 1795481 RB6333 Rhodopirellula baltica SH 1 hypothetical protein NP_867189.1 3325971 D 243090 CDS NP_867190.1 32474196 1795225 complement(3326078..3326341) 1 NC_005027.1 hypothetical protein 3326341 1795225 RB6334 Rhodopirellula baltica SH 1 hypothetical protein NP_867190.1 3326078 R 243090 CDS NP_867191.1 32474197 1790504 3326340..3326609 1 NC_005027.1 hypothetical protein 3326609 1790504 RB6336 Rhodopirellula baltica SH 1 hypothetical protein NP_867191.1 3326340 D 243090 CDS NP_867192.1 32474198 1793700 complement(3326683..3327696) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:H75377; conserved hypothetical protein - Deinococcus radiodurans; E=1e-11 pir:S76965; hypothetical protein - Synechocystis sp. (strain PCC; E=2e-08; hypothetical protein 3327696 1793700 RB6337 Rhodopirellula baltica SH 1 hypothetical protein NP_867192.1 3326683 R 243090 CDS NP_867193.1 32474199 1796987 complement(3327638..3328528) 1 NC_005027.1 PMID: 8590279 best DB hits: BLAST: pir:S75891; hypothetical protein slr1174 - Synechocystis sp. (strain; E=9e-06 pir:E75548; conserved hypothetical protein - Deinococcus radiodurans; E=0.011 COG: slr1174; COG0842 Permease component of an ABC-transporter; E=8e-07; hypothetical protein 3328528 1796987 RB6339 Rhodopirellula baltica SH 1 hypothetical protein NP_867193.1 3327638 R 243090 CDS NP_867194.1 32474200 1794747 complement(3328447..3328977) 1 NC_005027.1 hypothetical protein 3328977 1794747 RB6340 Rhodopirellula baltica SH 1 hypothetical protein NP_867194.1 3328447 R 243090 CDS NP_867195.1 32474201 1791464 complement(3328977..3329153) 1 NC_005027.1 hypothetical protein 3329153 1791464 RB6342 Rhodopirellula baltica SH 1 hypothetical protein NP_867195.1 3328977 R 243090 CDS NP_867196.1 32474202 1794509 3329190..3331400 1 NC_005027.1 PMID: 10484179 best DB hits: BLAST: ddbj:BAB05094.1; (AP001511) DNA primase [Bacillus halodurans]; E=1e-55 swissprot:P05096; PRIM_BACSU DNA PRIMASE ----- pir: A22282 DNA; E=3e-54 swissprot:P74893; PRIM_SYNP7 DNA PRIMASE ----- pir: T11850 DNA; E=5e-54 COG: BH1375; COG0358 DNA primase (bacterial type); E=1e-56 PFAM: PF01807; CHC2 zinc finger; E=5.1e-26 PF01751; Toprim domain; E=3.1e-11; DNA primase 3331400 dnaG 1794509 dnaG Rhodopirellula baltica SH 1 DNA primase NP_867196.1 3329190 D 243090 CDS NP_867197.1 32474203 1791537 3331611..3333314 1 NC_005027.1 PMID: 8188604 best DB hits: BLAST: pir:I40872; transcription initiation factor sigma 70 - Chlamydophila; E=1e-78 swissprot:Q9Z7F0; RPSD_CHLPN RNA POLYMERASE SIGMA FACTOR RPOD; E=9e-77 pir:E81502; RNA polymerase sigma factor, sigma-70 family CP1116; E=2e-76 COG: CPn0756; COG0568 DNA-directed RNA polymerase sigma subunits; E=8e-78 PFAM: PF00140; Sigma-70 factor; E=3.5e-109; transcription initiation factor sigma 70 3333314 1791537 RB6347 Rhodopirellula baltica SH 1 transcription initiation factor sigma 70 NP_867197.1 3331611 D 243090 CDS NP_867198.1 32474204 1795621 3333462..3333602 1 NC_005027.1 hypothetical protein 3333602 1795621 RB6349 Rhodopirellula baltica SH 1 hypothetical protein NP_867198.1 3333462 D 243090 CDS NP_867199.1 32474205 1790603 3333612..3336110 1 NC_005027.1 CcoN/CcoO FixN/FixO; bifunctional cbb3-type cytochrome c oxidase subunit I/II 3336110 1790603 RB6350 Rhodopirellula baltica SH 1 bifunctional cbb3-type cytochrome c oxidase subunit I/II NP_867199.1 3333612 D 243090 CDS NP_867200.1 32474206 1792017 3336171..3336347 1 NC_005027.1 hypothetical protein 3336347 1792017 RB6351 Rhodopirellula baltica SH 1 hypothetical protein NP_867200.1 3336171 D 243090 CDS NP_867201.1 32474207 1790052 3336344..3336961 1 NC_005027.1 PMID: 10952301 best DB hits: BLAST: pir:C82200; cytochrome c oxidase, chain CcoP VC1439 [similarity] -; E=7e-15 gb:AAB02559.1; (U58092) cbb3-type cytochrome c oxidase CcoP; E=1e-13 pir:A83452; probable cytochrome c PA1552 [imported] - Pseudomonas; E=1e-13 COG: VC1439; COG2010 Cytochrome c, mono- and diheme variants; E=7e-16 PFAM: PF00034; Cytochrome c; E=4.2e-11; cytochrome c oxidase (chain III, cbb3-type) 3336961 1790052 RB6353 Rhodopirellula baltica SH 1 cytochrome c oxidase (chain III, cbb3-type) NP_867201.1 3336344 D 243090 CDS NP_867202.1 32474208 1794052 3336973..3338490 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:D83130; probable iron-sulfur protein PA4131 [imported] -; E=7e-48 pir:G82371; FixG-related protein VC0036 [imported] - Vibrio cholerae; E=1e-45 pir:G81081; ferredoxin, 4Fe-4S bacterial type NMB1454 [imported] -; E=2e-45 COG: PA4131; COG0348 Polyferredoxin; E=6e-49 PFAM: PF00037; 4Fe-4S binding domain; E=0.27; iron-sulfur protein 3338490 1794052 RB6355 Rhodopirellula baltica SH 1 iron-sulfur protein NP_867202.1 3336973 D 243090 CDS NP_867203.1 32474209 1792143 3338493..3339026 1 NC_005027.1 PMID: 8661920 best DB hits: BLAST: embl:CAA64888.1; (X95634) fixH [Bradyrhizobium japonicum] -----; E=0.18; nitrogen fixation protein fixH 3339026 1792143 RB6356 Rhodopirellula baltica SH 1 nitrogen fixation protein fixH NP_867203.1 3338493 D 243090 CDS NP_867204.1 32474210 1792971 3339028..3339849 1 NC_005027.1 PMID: 10710307 best DB hits: BLAST: pir:D81161; conserved hypothetical protein NMB0759 [imported] -; E=2e-10 pir:A81944; hypothetical protein NMA0970 [imported] - Neisseria; E=9e-10 pir:G82199; conserved hypothetical protein VC1435 [imported] -; E=8e-06 COG: NMB0759; COG2836 Uncharacterized BCR; E=2e-11; hypothetical protein 3339849 1792971 RB6357 Rhodopirellula baltica SH 1 hypothetical protein NP_867204.1 3339028 D 243090 CDS NP_867205.1 32474211 1795466 3339859..3342360 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:F83451; probable cation-transporting P-type ATPase PA1549; E=2e-85 pir:A82200; cation transport ATPase, E1-E2 family VC1437 [imported]; E=3e-77 pir:D81129; cation transport ATPase, E1-E2 family NMB1042 [imported]; E=6e-74 COG: PA1549; COG2217 Cation transport ATPases; E=2e-86 PFAM: PF00403; Heavy-metal-associated domain; E=5.3e-08 PF00122; E1-E2 ATPase; E=4.1e-72 PF00702; haloacid dehalogenase-like hydro; E=2.6e-22; cation-transporting P-type ATPase 3342360 1795466 RB6360 Rhodopirellula baltica SH 1 cation-transporting P-type ATPase NP_867205.1 3339859 D 243090 CDS NP_867206.1 32474212 1791615 3342357..3342566 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:E83451; conserved hypothetical protein PA1548 [imported] -; E=0.036 embl:CAA64890.1; (X95634) fixS [Bradyrhizobium japonicum]; E=0.30 pir:C81074; fixS protein NMB1516 [imported] - Neisseria; E=0.62 COG: PA1548; COG3197 Uncharacterized protein, possibly involved in; E=0.003; nitrogen fixation protein fixS 3342566 1791615 RB6363 Rhodopirellula baltica SH 1 nitrogen fixation protein fixS NP_867206.1 3342357 D 243090 CDS NP_867207.1 32474213 1795177 3342586..3343374 1 NC_005027.1 PMID: 10684935 best DB hits: BLAST: pir:E81578; conserved hypothetical protein CP0417 [imported] -; E=8e-13 pir:C71559; probable outer membrane leader peptide CT073 - Chlamydia; E=9e-13 pir:A81713; conserved hypothetical protein TC0345 [imported] -; E=2e-12; ATP/GTP-binding protein 3343374 1795177 RB6364 Rhodopirellula baltica SH 1 ATP/GTP-binding protein NP_867207.1 3342586 D 243090 CDS NP_867208.1 32474214 1791338 complement(3343390..3344547) 1 NC_005027.1 PMID: 10731132 best DB hits: BLAST: gb:AAF53305.1; (AE003640) CG16956 gene product [Drosophila; E=0.88; hypothetical protein 3344547 1791338 RB6365 Rhodopirellula baltica SH 1 hypothetical protein NP_867208.1 3343390 R 243090 CDS NP_867209.1 32474215 1793270 3344826..3345236 1 NC_005027.1 best DB hits: BLAST: gb:AAC69888.1; (AF098788) nuclear calmodulin-binding protein; E=0.13; nuclear calmodulin-binding protein 3345236 1793270 RB6369 Rhodopirellula baltica SH 1 nuclear calmodulin-binding protein NP_867209.1 3344826 D 243090 CDS NP_867210.1 32474216 1793433 3345223..3346725 1 NC_005027.1 PMID: 1756170 best DB hits: BLAST: gb:AAF33506.1; (AF170176) Salmonella typhimurium transcriptional; E=3e-12 gb:AAG59807.1; AF305914_2 (AF305914) HydG [Klebsiella oxytoca]; E=3e-12 swissprot:P25852; HYDG_SALTY transcriptional regulator; E=4e-12 COG: hydG; COG2204 AAA superfamily ATPases with N-terminal receiver; E=2e-12 BS_yqiR_2; COG1221 NtrC family transcriptional regulators, ATPase; E=4e-08 glnG; COG2204 AAA superfamily ATPases with N-terminal receiver; E=1e-07 PFAM: PF00158; Sigma-54 interaction domain; E=2e-05; hydrogenase regulatory protein HydG 3346725 hydG 1793433 hydG Rhodopirellula baltica SH 1 hydrogenase regulatory protein HydG NP_867210.1 3345223 D 243090 CDS NP_867211.1 32474217 1794974 3346722..3347120 1 NC_005027.1 hypothetical protein 3347120 1794974 RB6372 Rhodopirellula baltica SH 1 hypothetical protein NP_867211.1 3346722 D 243090 CDS NP_867212.1 32474218 1791468 3347077..3348357 1 NC_005027.1 PMID: 1552862 best DB hits: BLAST: swissprot:P25811; THDF_BACSU POSSIBLE THIOPHENE AND FURAN; E=7e-21 gb:AAK06340.1; AE006453_4 (AE006453) GTP-binding protein ThdF; E=3e-20 embl:CAA71458.1; (Y10436) orf452; translated orf similarity to; E=2e-17 COG: BS_thdF; COG0486 Predicted GTPase; E=7e-22 DR2308; COG1160 Predicted GTPases; E=8e-12 TP0550; COG0486 Predicted GTPase; E=1e-11 PFAM: PF00071; Ras family; E=0.77 PF02421; Ferrous iron transport protein B; E=1.3e-05 PF01926; GTPase of unknown function; E=1e-06; tRNA modification GTPase 3348357 trmE 1791468 trmE Rhodopirellula baltica SH 1 tRNA modification GTPase NP_867212.1 3347077 D 243090 CDS NP_867213.1 32474219 1790755 3348288..3349616 1 NC_005027.1 best DB hits: BLAST: pir:T35587; hypothetical protein SC6G4.36c SC6G4.36c - Streptomyces; E=5e-11 pir:H70859; hypothetical protein Rv3037c - Mycobacterium; E=2e-10 COG: Rv3037c; COG0500 SAM-dependent methyltransferases; E=2e-11; hypothetical protein 3349616 1790755 RB6374 Rhodopirellula baltica SH 1 hypothetical protein NP_867213.1 3348288 D 243090 CDS NP_867214.1 32474220 1795862 3349681..3350574 1 NC_005027.1 hypothetical protein 3350574 1795862 RB6375 Rhodopirellula baltica SH 1 hypothetical protein NP_867214.1 3349681 D 243090 CDS NP_867215.1 32474221 1793547 complement(3350626..3352671) 1 NC_005027.1 necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH 3352671 mdoH 1793547 mdoH Rhodopirellula baltica SH 1 glucosyltransferase MdoH NP_867215.1 3350626 R 243090 CDS NP_867216.1 32474222 1790996 3352598..3353284 1 NC_005027.1 hypothetical protein 3353284 1790996 RB6378 Rhodopirellula baltica SH 1 hypothetical protein NP_867216.1 3352598 D 243090 CDS NP_867217.1 32474223 1790540 complement(3352661..3353122) 1 NC_005027.1 hypothetical protein 3353122 1790540 RB6379 Rhodopirellula baltica SH 1 hypothetical protein NP_867217.1 3352661 R 243090 CDS NP_867218.1 32474224 1794633 3353359..3353583 1 NC_005027.1 hypothetical protein 3353583 1794633 RB6380 Rhodopirellula baltica SH 1 hypothetical protein NP_867218.1 3353359 D 243090 CDS NP_867219.1 32474225 1795080 3353694..3355046 1 NC_005027.1 PMID: 10910347 best DB hits: BLAST: pir:F82557; hypothetical protein XF2449 [imported] - Xylella; E=3e-50; hypothetical protein 3355046 1795080 RB6381 Rhodopirellula baltica SH 1 hypothetical protein NP_867219.1 3353694 D 243090 CDS NP_867220.1 32474226 1795728 complement(3355043..3355162) 1 NC_005027.1 hypothetical protein 3355162 1795728 RB6382 Rhodopirellula baltica SH 1 hypothetical protein NP_867220.1 3355043 R 243090 CDS NP_867221.1 32474227 1791086 3355184..3356905 1 NC_005027.1 involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G 3356905 mdoG 1791086 mdoG Rhodopirellula baltica SH 1 glucan biosynthesis protein G NP_867221.1 3355184 D 243090 CDS NP_867222.1 32474228 1793646 complement(3356942..3358297) 1 NC_005027.1 PMID: 7934829 best DB hits: BLAST: swissprot:P35160; RESA_BACSU RESA PROTEIN ----- pir: S45556; E=3e-14 pir:E69891; cytochrome c biogenesis protein CycX homolog homolog; E=1e-12 ddbj:BAB06587.1; (AP001516) thioldisulfide interchange protein; E=1e-10 COG: BS_resA; COG0526 Thiol-disulfide isomerase and thioredoxins; E=2e-15 PFAM: PF00578; AhpC/TSA family; E=0.0027 PF02630; SCO1/SenC; E=0.28 PF00085; Thioredoxin; E=1.8e-08; thioredoxin related protein 3358297 1793646 RB6384 Rhodopirellula baltica SH 1 thioredoxin related protein NP_867222.1 3356942 R 243090 CDS NP_867223.1 32474229 1793431 complement(3358338..3359480) 1 NC_005027.1 PMID: 10484179 best DB hits: BLAST: ddbj:BAB07065.1; (AP001518) BH3346~unknown conserved protein in; E=2e-11 swissprot:P49304; MOCC_RHIME RHIZOPINE CATABOLISM PROTEIN MOCC; E=0.84 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=0.38; hypothetical protein 3359480 1793431 RB6386 Rhodopirellula baltica SH 1 hypothetical protein NP_867223.1 3358338 R 243090 CDS NP_867224.1 32474230 1792347 complement(3359525..3360448) 1 NC_005027.1 PMID: 10910347 best DB hits: BLAST: pir:G82780; conserved hypothetical protein XF0649 [imported] -; E=3e-13 embl:CAA97104.1; (Z72886) ORF YGR101w [Saccharomyces cerevisiae]; E=2e-10 pir:D71258; probable glpG protein - syphilis spirochete -----; E=1e-09 COG: XF0649; COG0705 Uncharacterized membrane protein (homolog of; E=3e-14 PFAM: PF01694; Rhomboid family; E=2.6e-11; hypothetical protein 3360448 1792347 RB6387 Rhodopirellula baltica SH 1 hypothetical protein NP_867224.1 3359525 R 243090 CDS NP_867225.1 32474231 1793169 complement(3360472..3360906) 1 NC_005027.1 hypothetical protein 3360906 1793169 RB6388 Rhodopirellula baltica SH 1 hypothetical protein NP_867225.1 3360472 R 243090 CDS NP_867226.1 32474232 1791794 complement(3360908..3361996) 1 NC_005027.1 PMID: 10865958 best DB hits: BLAST: swissprot:P54466; YQFA_BACSU HYPOTHETICAL 35.6 KD PROTEIN IN; E=4e-73 ddbj:BAB05076.1; (AP001511) BH1357~unknown conserved protein in; E=3e-72 embl:CAA12151.1; (AJ224829) ORF1 [Bacillus megaterium]; E=2e-71; hypothetical protein 3361996 1791794 RB6389 Rhodopirellula baltica SH 1 hypothetical protein NP_867226.1 3360908 R 243090 CDS NP_867227.1 32474233 1796597 3361959..3362219 1 NC_005027.1 hypothetical protein 3362219 1796597 RB6390 Rhodopirellula baltica SH 1 hypothetical protein NP_867227.1 3361959 D 243090 CDS NP_867228.1 32474234 1793977 complement(3362175..3363908) 1 NC_005027.1 PMID: 8955422 best DB hits: BLAST: gb:AAC33456.1; (AF067083) unknown [Vitreoscilla sp.]; E=7e-14 swissprot:P32146; RBN_ECOLI RIBONUCLEASE BN (RNASE BN) -----; E=2e-13 pir:F83526; probable ribonuclease PA0951 [imported] - Pseudomonas; E=1e-12 COG: rbn; COG1295 tRNA-processing ribonuclease BN; E=2e-14; ribonuclease BN 3363908 rbn 1793977 rbn Rhodopirellula baltica SH 1 ribonuclease BN NP_867228.1 3362175 R 243090 CDS NP_867229.1 32474235 1791075 3363910..3364158 1 NC_005027.1 hypothetical protein 3364158 1791075 RB6393 Rhodopirellula baltica SH 1 hypothetical protein NP_867229.1 3363910 D 243090 CDS NP_867230.1 32474236 1792340 complement(3364068..3365288) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: gb:AAH00605.1; AAH00605 (BC000605) glyoxylate; E=1e-66 ref:XP_005487.2; glyoxylate reductasehydroxypyruvate reductase; E=1e-66 gb:AAF51963.1; (AE003602) CG1236 gene product [Drosophila; E=7e-61 COG: APE1831; COG1052 Lactate dehydrogenase and related dehydrogenases; E=2e-60 PAB0514; COG0111 Phosphoglycerate dehydrogenase and related; E=3e-44 YNL274c; COG1052 Lactate dehydrogenase and related dehydrogenases; E=3e-34 PFAM: PF00389; D-isomer specific 2-hydroxyacid; E=2.4e-06 PF02826; D-isomer specific 2-hydroxyacid; E=2.6e-85; 2-hydroxyacid dehydrogenase 3365288 1792340 RB6394 Rhodopirellula baltica SH 1 2-hydroxyacid dehydrogenase NP_867230.1 3364068 R 243090 CDS NP_867231.1 32474237 1791536 3364879..3367215 1 NC_005027.1 PMID: 7511204 best DB hits: BLAST: pir:A56534; P58 protein - bovine ----- gb: AAA17795.1; E=2e-08 gb:AAC52592.1; (U28423) p58 [Mus musculus]; E=1e-07 gb:AAC50502.1; (U28424) p58 [Homo sapiens]; E=2e-07 COG: BB0210; COG0457 TPR-repeat-containing proteins; E=2e-04 PFAM: PF00515; TPR Domain; E=0.65; PKR inhibitor (translation regulation) 3367215 1791536 RB6395 Rhodopirellula baltica SH 1 PKR inhibitor (translation regulation) NP_867231.1 3364879 D 243090 CDS NP_867232.1 32474238 1792643 3367281..3368609 1 NC_005027.1 hypothetical protein 3368609 1792643 RB6398 Rhodopirellula baltica SH 1 hypothetical protein NP_867232.1 3367281 D 243090 CDS NP_867233.1 32474239 1796746 3368649..3369926 1 NC_005027.1 best DB hits: PFAM: PF00397; WW domain; E=0.54; hypothetical protein 3369926 1796746 RB6400 Rhodopirellula baltica SH 1 hypothetical protein NP_867233.1 3368649 D 243090 CDS NP_867234.1 32474240 1790811 3369939..3370853 1 NC_005027.1 PMID: 10910347 best DB hits: BLAST: pir:T34675; probable response regulator - Streptomyces coelicolor; E=1e-05 pir:A82535; transcriptional regulator LuxRUhpA family XF2608; E=4e-05 pir:T35105; probable two-component regulator - Streptomyces; E=7e-05 COG: XF2608; COG2197 Response regulators consisting of a CheY-like; E=4e-06 PA3420; COG2909 ATP-dependent transcriptional regulator; E=4e-04 PA3714; COG2197 Response regulators consisting of a CheY-like; E=4e-04 PFAM: PF00989; PAS domain; E=4.2e-06 PF00196; Bacterial regulatory proteins, luxR; E=3.1e-14; response regulator 3370853 1790811 RB6403 Rhodopirellula baltica SH 1 response regulator NP_867234.1 3369939 D 243090 CDS NP_867235.1 32474241 1794449 complement(3371087..3371368) 1 NC_005027.1 hypothetical protein 3371368 1794449 RB6405 Rhodopirellula baltica SH 1 hypothetical protein NP_867235.1 3371087 R 243090 CDS NP_867236.1 32474242 1791662 complement(3371502..3371975) 1 NC_005027.1 hypothetical protein 3371975 1791662 RB6407 Rhodopirellula baltica SH 1 hypothetical protein NP_867236.1 3371502 R 243090 CDS NP_867237.1 32474243 1796922 3371976..3372284 1 NC_005027.1 hypothetical protein 3372284 1796922 RB6408 Rhodopirellula baltica SH 1 hypothetical protein NP_867237.1 3371976 D 243090 CDS NP_867238.1 32474244 1790430 complement(3372456..3373544) 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB56131.1; (AL117669) hypothetical protein [Streptomyces; E=8e-21 pir:T35709; hypothetical protein SC7H1.14 SC7H1.14 - Streptomyces; E=9e-20; hypothetical protein 3373544 1790430 RB6409 Rhodopirellula baltica SH 1 hypothetical protein NP_867238.1 3372456 R 243090 CDS NP_867239.1 32474245 1792912 complement(3373581..3374627) 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: swissprot:P74696; TRUB_SYNY3 TRNA PSEUDOURIDINE SYNTHASE B (TRNA; E=5e-36 swissprot:P72154; TRUB_PSEAE TRNA PSEUDOURIDINE SYNTHASE B (TRNA; E=2e-32 swissprot:P32732; TRUB_BACSU TRNA PSEUDOURIDINE SYNTHASE B (TRNA; E=1e-27 COG: slr0457; COG0130 Pseudouridine synthase; E=4e-37 PFAM: PF01509; TruB family pseudouridylate synthase; E=2.5e-39; tRNA pseudouridine synthase B 3374627 truB 1792912 truB Rhodopirellula baltica SH 1 tRNA pseudouridine synthase B NP_867239.1 3373581 R 243090 CDS NP_867240.1 32474246 1795291 complement(3374723..3375979) 1 NC_005027.1 hypothetical protein 3375979 1795291 RB6413 Rhodopirellula baltica SH 1 hypothetical protein NP_867240.1 3374723 R 243090 CDS NP_867241.1 32474247 1791257 complement(3376119..3376394) 1 NC_005027.1 PMID: 6313685 best DB hits: BLAST: pdb:1F5B; A Chain A, Crystal Structure Of F2h Ferredoxin 1; E=3e-21 pdb:1FRM; Ferredoxin (Fdi) Mutant With Glu 46 Replaced By; E=4e-21 swissprot:P03942; FER_THETH FERREDOXIN ----- pir: FETWT; E=8e-21 COG: PA3621; COG1146 Ferredoxin 3; E=2e-20 APE2605; COG0437 Fe-S-cluster-containing hydrogenase components 1; E=0.004 ygfS; COG1142 Fe-S-cluster-containing hydrogenase components 2; E=0.005 PFAM: PF00037; 4Fe-4S binding domain; E=2.1e-07; ferredoxin 3376394 1791257 RB6415 Rhodopirellula baltica SH 1 ferredoxin NP_867241.1 3376119 R 243090 CDS NP_867242.1 32474248 1793117 3376574..3377935 1 NC_005027.1 PMID: 8905232 best DB hits: BLAST: swissprot:P75876; YCCW_ECOLI HYPOTHETICAL 41.1 KD PROTEIN IN; E=7e-47 ddbj:BAA35732.1; (D90734) Hypothetical protein [Escherichia coli]; E=7e-47 gb:AAG55453.1; AE005286_12 (AE005286) oxidoreductase; E=8e-47 COG: yccW; COG1092 Predicted SAM-dependent methyltransferases; E=7e-48 BH0124; COG2813 16S RNA G1207 methylase RsmC; E=1e-04 PA3048_2; COG1092 Predicted SAM-dependent methyltransferases; E=1e-04 PFAM: PF00107; Zinc-binding dehydrogenases; E=0.039 PF02005; N2,N2-dimethylguanosine tRNA methylt; E=0.033; SAM-dependent methyltransferase 3377935 1793117 RB6416 Rhodopirellula baltica SH 1 SAM-dependent methyltransferase NP_867242.1 3376574 D 243090 CDS NP_867243.1 32474249 1791915 3378045..3378794 1 NC_005027.1 PMID: 9634230 PMID: 7482699 best DB hits: BLAST: pir:B70700; hypothetical protein Rv0020c - Mycobacterium; E=8e-06 pir:T10015; hypothetical protein MLB1770.15c - Mycobacterium leprae; E=4e-05 ddbj:BAB20624.1; (AB052847) adenylate cyclase; E=0.001 COG: Rv0020c_2; COG1716 FHA-domain-containing proteins; E=4e-06 PFAM: PF00498; FHA domain; E=8.9e-17; hypothetical protein 3378794 1791915 RB6417 Rhodopirellula baltica SH 1 hypothetical protein NP_867243.1 3378045 D 243090 CDS NP_867244.1 32474250 1789951 3378859..3380619 1 NC_005027.1 hypothetical protein 3380619 1789951 RB6420 Rhodopirellula baltica SH 1 hypothetical protein NP_867244.1 3378859 D 243090 CDS NP_867245.1 32474251 1794549 3380603..3380740 1 NC_005027.1 hypothetical protein 3380740 1794549 RB6423 Rhodopirellula baltica SH 1 hypothetical protein NP_867245.1 3380603 D 243090 CDS NP_867246.1 32474252 1790180 3380727..3380879 1 NC_005027.1 PMID: 9929392 best DB hits: BLAST: gb:AAC35721.1; (AF041468) ribosomal protein L36 [Guillardia; E=8e-07 pir:D82269; probable ribosomal protein L36 VC0879 [imported] -; E=1e-05 pir:B83196; conserved hypothetical protein PA3600 [imported] -; E=7e-05 COG: VC0879; COG0257 Ribosomal protein L36; E=9e-07 PFAM: PF00444; Ribosomal protein L36; E=6.9e-09; ribosomal protein L36 3380879 rpmJ 1790180 rpmJ Rhodopirellula baltica SH 1 ribosomal protein L36 NP_867246.1 3380727 D 243090 CDS NP_867247.1 32474253 1794177 3380929..3382257 1 NC_005027.1 PMID: 11259647; hypothetical protein 3382257 1794177 RB6426 Rhodopirellula baltica SH 1 hypothetical protein NP_867247.1 3380929 D 243090 CDS NP_867248.1 32474254 1796273 complement(3382322..3382816) 1 NC_005027.1 PMID: 11097914 best DB hits: BLAST: gb:AAF01193.1; AF179401_2 (AF179401) unknown [Sinorhizobium; E=9e-28 swissprot:P74615; YE83_SYNY3 HYPOTHETICAL 18.5 KDA PROTEIN SLL1483; E=2e-27 swissprot:O33752; YH35_SYNP2 HYPOTHETICAL 13.9 KDA PROTEIN SLL1735; E=7e-20 COG: sll1483; COG2335 Secreted and surface protein containing; E=2e-28 PFAM: PF02469; Fasciclin domain; E=6.8e-44; hypothetical protein 3382816 1796273 RB6428 Rhodopirellula baltica SH 1 hypothetical protein NP_867248.1 3382322 R 243090 CDS NP_867249.1 32474255 1793538 complement(3382813..3382998) 1 NC_005027.1 hypothetical protein 3382998 1793538 RB6429 Rhodopirellula baltica SH 1 hypothetical protein NP_867249.1 3382813 R 243090 CDS NP_867250.1 32474256 1791768 3383157..3384044 1 NC_005027.1 hypothetical protein 3384044 1791768 RB6430 Rhodopirellula baltica SH 1 hypothetical protein NP_867250.1 3383157 D 243090 CDS NP_867251.1 32474257 1790190 complement(3384209..3385699) 1 NC_005027.1 hypothetical protein 3385699 1790190 RB6431 Rhodopirellula baltica SH 1 hypothetical protein NP_867251.1 3384209 R 243090 CDS NP_867252.1 32474258 1791811 complement(3385719..3388430) 1 NC_005027.1 best DB hits: PFAM: PF01002; Flavivirus non-structural prot; E=0.28; hypothetical protein 3388430 1791811 RB6432 Rhodopirellula baltica SH 1 hypothetical protein NP_867252.1 3385719 R 243090 CDS NP_867253.1 32474259 1791910 complement(3388536..3388682) 1 NC_005027.1 hypothetical protein 3388682 1791910 RB6434 Rhodopirellula baltica SH 1 hypothetical protein NP_867253.1 3388536 R 243090 CDS NP_867254.1 32474260 1797027 complement(3388640..3389017) 1 NC_005027.1 best DB hits: BLAST: swissprot:O69159; ACPS_BRAJA HOLO-[ACYL-CARRIER PROTEIN]; E=2e-10 swissprot:Q9Z8M5; ACPS_CHLPN HOLO-[ACYL-CARRIER PROTEIN]; E=5e-09 swissprot:P15368; FAS2_PENPA FATTY ACID SYNTHASE, SUBUNIT ALPHA; E=1e-07 COG: CPn0313; COG0736 Phosphopantetheinyl transferase (holo-ACP; E=5e-10 VC2457; COG0736 Phosphopantetheinyl transferase (holo-ACP synthase); E=2e-06 aq_813; COG0736 Phosphopantetheinyl transferase (holo-ACP; E=3e-06 PFAM: PF01648; 4'-phosphopantetheinyl transferase s; E=6.1e-24; holo-[acyl-carrier protein] synthase 3389017 acpS 1797027 acpS Rhodopirellula baltica SH 1 holo-[acyl-carrier protein] synthase NP_867254.1 3388640 R 243090 CDS NP_867255.1 32474261 1791723 complement(3389021..3389983) 1 NC_005027.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 3389983 trpS 1791723 trpS Rhodopirellula baltica SH 1 tryptophanyl-tRNA synthetase NP_867255.1 3389021 R 243090 CDS NP_867256.1 32474262 1793305 complement(3390208..3391665) 1 NC_005027.1 hypothetical protein 3391665 1793305 RB6438 Rhodopirellula baltica SH 1 hypothetical protein NP_867256.1 3390208 R 243090 CDS NP_867257.1 32474263 1794646 3391656..3391829 1 NC_005027.1 hypothetical protein 3391829 1794646 RB6440 Rhodopirellula baltica SH 1 hypothetical protein NP_867257.1 3391656 D 243090 CDS NP_867258.1 32474264 1794116 complement(3391780..3392022) 1 NC_005027.1 hypothetical protein 3392022 1794116 RB6441 Rhodopirellula baltica SH 1 hypothetical protein NP_867258.1 3391780 R 243090 CDS NP_867259.1 32474265 1795549 3391970..3393274 1 NC_005027.1 PMID: 9002610 best DB hits: BLAST: embl:CAA64383.1; (X94756) cystathionine gamma-synthase; E=2e-75 gb:AAF26162.1; AC008261_19 (AC008261) cystathionine; E=2e-75 swissprot:P55217; METB_ARATH CYSTATHIONINE GAMMA-SYNTHASE,; E=3e-75 COG: APE1226; COG0626 Cystathionine beta-lyases/cystathionine; E=1e-64 PA5025; COG2873 O-acetylhomoserine sulfhydrylase; E=4e-47 PH1093; COG0626 Cystathionine beta-lyases/cystathionine; E=5e-47 PFAM: PF01053; Cys/Met metabolism PLP-depend; E=4.5e-154; cystathionine gamma-synthase 3393274 metB 1795549 metB Rhodopirellula baltica SH 1 cystathionine gamma-synthase NP_867259.1 3391970 D 243090 CDS NP_867260.1 32474266 1794028 3393276..3394469 1 NC_005027.1 PMID: 9843488 best DB hits: BLAST: pir:T45483; cystathionine gamma-lyase homolog [imported] -; E=9e-93 pir:F83595; probable cystathionine gamma-lyase PA0400 [imported] -; E=1e-92 gb:AAG19548.1; (AE005045) cystathionine alpha synthase; MetB; E=3e-92 COG: PA0400; COG0626 Cystathionine beta-lyases/cystathionine; E=1e-93 PFAM: PF01053; Cys/Met metabolism PLP-depend; E=2.9e-199; cystathionine gamma-lyase 3394469 metB 1794028 metB Rhodopirellula baltica SH 1 cystathionine gamma-lyase NP_867260.1 3393276 D 243090 CDS NP_867261.1 32474267 1791479 complement(3394492..3394686) 1 NC_005027.1 hypothetical protein 3394686 1791479 RB6444 Rhodopirellula baltica SH 1 hypothetical protein NP_867261.1 3394492 R 243090 CDS NP_867262.1 32474268 1794603 3394630..3395670 1 NC_005027.1 PMID: 9403685 best DB hits: BLAST: pir:G70121; conserved hypothetical protein BB0175 - Lyme disease; E=2e-13 swissprot:P71761; YE80_MYCTU HYPOTHETICAL 34.3 KDA PROTEIN RV1480; E=3e-11 pir:D83106; hypothetical protein PA4323 [imported] - Pseudomonas; E=1e-09 COG: BB0175; COG1721 Uncharacterized ACR; E=2e-14 APE1031; COG2425 Uncharacterized ACR; E=0.002 VNG0222C; COG1721 Uncharacterized ACR; E=0.008 PFAM: PF01882; Protein of unknown function DUF58; E=5.9e-18; hypothetical protein 3395670 1794603 RB6446 Rhodopirellula baltica SH 1 hypothetical protein NP_867262.1 3394630 D 243090 CDS NP_867263.1 32474269 1792034 3395667..3397970 1 NC_005027.1 PMID: 11756688; hypothetical protein 3397970 1792034 RB6447 Rhodopirellula baltica SH 1 hypothetical protein NP_867263.1 3395667 D 243090 CDS NP_867264.1 32474270 1790501 3397889..3400441 1 NC_005027.1 PMID: 10617197 best DB hits: BLAST: gb:AAD03363.1; (AC005957) EnSpm-like transposon protein; E=0.89; en/Spm-like transposon protein 3400441 1790501 RB6448 Rhodopirellula baltica SH 1 en/Spm-like transposon protein NP_867264.1 3397889 D 243090 CDS NP_867265.1 32474271 1792073 3400438..3406236 1 NC_005027.1 PMID: 7783620 best DB hits: BLAST: pir:A81937; IgA-specific metalloendopeptidase (EC 3.4.24.13) NMA0905; E=6e-08 pir:C81169; IgA-specific metalloendopeptidase (EC 3.4.24.13) NMB0700; E=9e-07 pir:T18296; myosin heavy chain - Entamoeba histolytica ----- gb:; E=9e-05; IgA-specific metalloendopeptidase 3406236 1792073 RB6449 Rhodopirellula baltica SH 1 IgA-specific metalloendopeptidase NP_867265.1 3400438 D 243090 CDS NP_867266.1 32474272 1796131 3406233..3407384 1 NC_005027.1 hypothetical protein 3407384 1796131 RB6452 Rhodopirellula baltica SH 1 hypothetical protein NP_867266.1 3406233 D 243090 CDS NP_867267.1 32474273 1791645 complement(3407495..3407776) 1 NC_005027.1 hypothetical protein 3407776 1791645 RB6454 Rhodopirellula baltica SH 1 hypothetical protein NP_867267.1 3407495 R 243090 CDS NP_867268.1 32474274 1791462 complement(3407787..3407990) 1 NC_005027.1 hypothetical protein 3407990 1791462 RB6457 Rhodopirellula baltica SH 1 hypothetical protein NP_867268.1 3407787 R 243090 CDS NP_867269.1 32474275 1790051 3407939..3408754 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 3408754 1790051 RB6458 Rhodopirellula baltica SH 1 signal peptide NP_867269.1 3407939 D 243090 CDS NP_867270.1 32474276 1791641 3408788..3414874 1 NC_005027.1 PMID: 9346930 best DB hits: BLAST: pir:T08617; aggregation factor core protein MAFp3, isoform E -; E=5e-04; aggregation factor core protein MAFp3, isoform E 3414874 1791641 RB6459 Rhodopirellula baltica SH 1 aggregation factor core protein MAFp3, isoform E NP_867270.1 3408788 D 243090 CDS NP_867271.1 32474277 1793069 3414908..3415180 1 NC_005027.1 hypothetical protein 3415180 1793069 RB6462 Rhodopirellula baltica SH 1 hypothetical protein NP_867271.1 3414908 D 243090 CDS NP_867272.1 32474278 1791183 3415155..3415724 1 NC_005027.1 hypothetical protein 3415724 1791183 RB6463 Rhodopirellula baltica SH 1 hypothetical protein NP_867272.1 3415155 D 243090 CDS NP_867273.1 32474279 1790728 complement(3415696..3416580) 1 NC_005027.1 PMID: 10830266 best DB hits: BLAST: gb:AAF35290.1; AF194444_3 (AF194444) SqdC [Sinorhizobium meliloti]; E=2e-18 pir:D81275; probable nucleotide sugar dehydratase Cj1319 [imported]; E=3e-15 pir:D70696; probable dtdp-glucose 4 - Mycobacterium tuberculosis; E=9e-15 COG: Cj1319; COG0451 Nucleoside-diphosphate-sugar epimerases; E=3e-16 aq_1069; COG1087 UDP-glucose 4-epimerase; E=1e-12 MTH1789; COG1088 dTDP-D-glucose 4,6-dehydratase; E=3e-11 PFAM: PF01073; 3-beta hydroxysteroid dehydrogenase; E=0.014 PF01370; NAD dependent epimerase/dehydratase; E=5.8e-16; sulfolipid biosynthesis protein SqdC 3416580 sqdC 1790728 sqdC Rhodopirellula baltica SH 1 sulfolipid biosynthesis protein SqdC NP_867273.1 3415696 R 243090 CDS NP_867274.1 32474280 1796036 3416688..3418610 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:E75426; GTP-binding translation elongation factor homolog; E=1e-163 pir:H81111; GTP-binding protein TypA NMB1199 [imported] - Neisseria; E=1e-161 pir:D81906; probable GTP-binding protein NMA1370 [imported] -; E=1e-161 COG: DR1198; COG1217 Predicted membrane GTPase involved in stress; E=1e-164 typA; COG1217 Predicted membrane GTPase involved in stress response; E=1e-156 BS_ylaG; COG1217 Predicted membrane GTPase involved in stress; E=1e-155 PFAM: PF00009; Elongation factor Tu family; E=2.1e-91 PF00679; Elongation factor G C-terminus; E=3.9e-06; GTP-binding translation elongation factor-like protein 3418610 typA 1796036 typA Rhodopirellula baltica SH 1 GTP-binding translation elongation factor-like protein NP_867274.1 3416688 D 243090 CDS NP_867275.1 32474281 1789956 3418620..3419378 1 NC_005027.1 PMID: 9537320 best DB hits: BLAST: pir:A70471; phosphoglycerate mutase 1 - Aquifex aeolicus -----; E=0.006 pir:G69831; phosphoglycerate mutase (glycolysis) homolog yhfR -; E=0.012 embl:CAA99510.1; (Z75191) ORF YOR283w [Saccharomyces; E=0.021 COG: aq_1990; COG0406 Phosphoglycerate; E=6e-04 BS_yhfR; COG0406 Phosphoglycerate mutase/fructose-2,6-bisphosphatase; E=0.001 YOR283w; COG0406 Phosphoglycerate; E=0.002 PFAM: PF00300; Phosphoglycerate mutase; E=3.9e-05; phosphoglycerate mutase 1 3419378 1789956 RB6467 Rhodopirellula baltica SH 1 phosphoglycerate mutase 1 NP_867275.1 3418620 D 243090 CDS NP_867276.1 32474282 1794229 3419515..3420273 1 NC_005027.1 best DB hits: BLAST: pir:F82572; sodium ABC transporter ATP-binding protein XF2329; E=8e-44 swissprot:P46903; NATA_BACSU ATP-BINDING TRANSPORT PROTEIN NATA; E=2e-40 pir:B75459; sodium extrusion protein NatA - Deinococcus radiodurans; E=3e-39 COG: XF2329; COG1131 ABC-type multidrug transport system, ATPase; E=8e-45 ybhF; COG1131 ABC-type multidrug transport system, ATPase component; E=7e-32 PFAM: PF00448; SRP54-type protein, GTPase do; E=0.26 PF00005; ABC transporter; E=6.2e-51; sodium ABC transporter ATP-binding protein 3420273 1794229 RB6469 Rhodopirellula baltica SH 1 sodium ABC transporter ATP-binding protein NP_867276.1 3419515 D 243090 CDS NP_867277.1 32474283 1790593 3420270..3422375 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:A75459; sodium extrusion protein NatB - Deinococcus radiodurans; E=1e-09 swissprot:P46904; NATB_BACSU PROTEIN NATB ----- pir: B69666; E=3e-07 ddbj:BAA22237.1; (AB000617) NatB [Bacillus subtilis]; E=0.002 COG: DR0926; COG1668 ATP-dependent Na+ efflux pump membrane component; E=1e-10 ybhS; COG0842 Permease component of an ABC-transporter; E=0.003 PFAM: PF02517; CAAX amino terminal protease; E=1.8e-15; sodium extrusion protein NatB 3422375 natB 1790593 natB Rhodopirellula baltica SH 1 sodium extrusion protein NatB NP_867277.1 3420270 D 243090 CDS NP_867278.1 32474284 1796590 complement(3422372..3423970) 1 NC_005027.1 PMID: 9384377 best DB hits: BLAST: pir:A55856; llm protein - Staphylococcus aureus ----- ddbj:; E=7e-25 pir:B69721; teichoic acid linkage unit synthesis tagO - Bacillus; E=5e-24 ddbj:BAA82114.1; (AB022909) RgpG [Streptococcus mutans]; E=5e-23 COG: BS_tagO; COG0472 UDP-N-acetylmuramyl pentapeptide; E=4e-25 PFAM: PF00953; Glycosyl transferase; E=4e-32; undecaprenyl-phosphate N-acetylglucosaminyltransferase 3423970 murG 1796590 murG Rhodopirellula baltica SH 1 undecaprenyl-phosphate N-acetylglucosaminyltransferase NP_867278.1 3422372 R 243090 CDS NP_867279.1 32474285 1789931 3424095..3424313 1 NC_005027.1 hypothetical protein 3424313 1789931 RB6475 Rhodopirellula baltica SH 1 hypothetical protein NP_867279.1 3424095 D 243090 CDS NP_867280.1 32474286 1792794 3424543..3425652 1 NC_005027.1 hypothetical protein 3425652 1792794 RB6477 Rhodopirellula baltica SH 1 hypothetical protein NP_867280.1 3424543 D 243090 CDS NP_867281.1 32474287 1793050 3425693..3427075 1 NC_005027.1 best DB hits: BLAST: pir:F70345; polysaccharide biosynthesis protein - Aquifex aeolicus; E=0.61; polysaccharide biosynthesis protein 3427075 1793050 RB6480 Rhodopirellula baltica SH 1 polysaccharide biosynthesis protein NP_867281.1 3425693 D 243090 CDS NP_867282.1 32474288 1794167 complement(3427166..3427936) 1 NC_005027.1 PMID: 10484179 PMID: 7493321 best DB hits: BLAST: ddbj:BAB06566.1; (AP001516) BH2847~unknown conserved protein; E=9e-22 swissprot:O31613; YJBO_BACSU HYPOTHETICAL 31.5 KD PROTEIN IN; E=3e-19 swissprot:Q45480; YLYB_BACSU HYPOTHETICAL 33.7 KD PROTEIN IN; E=8e-19 COG: BH2847; COG0564 Pseudouridylate synthases, 23S RNA-specific; E=9e-23 PFAM: PF00849; RNA pseudouridylate synthase; E=1.7e-33; ribosomal large subunit pseudouridine synthase D 3427936 rluD 1794167 rluD Rhodopirellula baltica SH 1 ribosomal large subunit pseudouridine synthase D NP_867282.1 3427166 R 243090 CDS NP_867283.1 32474289 1795802 3427842..3429392 1 NC_005027.1 PMID: 8300539 PMID: 2164680 best DB hits: BLAST: gb:AAF33434.1; (AF233324) S. typhimurium DNA-dependent ATPase DNA; E=5e-61 swissprot:P15043; RECQ_ECOLI ATP-DEPENDENT DNA HELICASE RECQ; E=6e-61 gb:AAA24517.1; (M30198) recQ [Escherichia coli]; E=1e-60 COG: recQ; COG0514 Superfamily II DNA helicase; E=1e-61 YDR021w; COG0513 Superfamily II DNA and RNA helicases; E=8e-10 PFAM: PF00270; DEAD/DEAH box helicase; E=4.1e-34 PF00271; Helicase conserved C-terminal doma; E=5.1e-23; ATP-dependent DNA helicase RecQ 3429392 recQ 1795802 recQ Rhodopirellula baltica SH 1 ATP-dependent DNA helicase RecQ NP_867283.1 3427842 D 243090 CDS NP_867284.1 32474290 1794459 complement(3429369..3430289) 1 NC_005027.1 PMID: 8905231 PMID: 8304179 best DB hits: BLAST: swissprot:P73248; DHPS_SYNY3 DIHYDROPTEROATE SYNTHASE (DHPS); E=2e-51 pir:E83053; dihydropteroate synthase PA4750 [imported] - Pseudomonas; E=2e-49 pir:E72425; dihydropteroate synthase (EC 2.5.1.15) TM0040; E=2e-45 COG: slr2026; COG0294 Dihydropteroate synthase; E=2e-52 PFAM: PF00809; Dihydropteroate synthase; E=1.1e-113; dihydropteroate synthase 3430289 folP 1794459 folP Rhodopirellula baltica SH 1 dihydropteroate synthase NP_867284.1 3429369 R 243090 CDS NP_867285.1 32474291 1796016 complement(3430286..3431686) 1 NC_005027.1 PMID: 10484179 PMID: 7768836 best DB hits: BLAST: ddbj:BAB05062.1; (AP001511) coproporphyrinogen III oxidase; E=1e-32 swissprot:O67886; HEMN_AQUAE OXYGEN-INDEPENDENT COPROPORPHYRINOGEN; E=2e-31 ddbj:BAB10571.1; (AB008265) oxygen-independent; E=6e-30 COG: BH1343; COG0635 Coproporphyrinogen III oxidase and related FeS; E=1e-33 PFAM: PF02473; Oxygen-independent Coproporphy; E=9.5e-08; coproporphyrinogen III oxidase 3431686 hemN 1796016 hemN Rhodopirellula baltica SH 1 coproporphyrinogen III oxidase NP_867285.1 3430286 R 243090 CDS NP_867286.1 32474292 1794364 complement(3431741..3433108) 1 NC_005027.1 PMID: 9371463 best DB hits: BLAST: pir:H69064; serinethreonine protein kinase related protein -; E=3e-13 pir:C75264; probable serinethreonine protein kinase - Deinococcus; E=1e-08 swissprot:P42111; YXAL_BACSU HYPOTHETICAL 38.5 KDA PROTEIN IN; E=5e-07 COG: MTH1485; COG1520 Uncharacterized proteins of WD40-like repeat family; E=3e-14 DR2518_2; COG1520 Uncharacterized proteins of WD40-like repeat; E=5e-09 BS_yxaL; COG1520 Uncharacterized proteins of WD40-like repeat family; E=4e-08 PFAM: PF01011; PQQ enzyme repeat; E=0.0066; serine/threonine protein kinase related protein 3433108 1794364 RB6486 Rhodopirellula baltica SH 1 serine/threonine protein kinase related protein NP_867286.1 3431741 R 243090 CDS NP_867287.1 32474293 1791185 3433231..3434721 1 NC_005027.1 PMID: 8067995 best DB hits: BLAST: gb:AAF08579.1; AC011623_12 (AC011623) dehydroquinase; E=2e-74 pir:S46210; 3-dehydroquinate dehydratase (EC 4.2.1.10) shikimate; E=6e-67 pir:T06264; 3-dehydroquinate dehydratase (EC 4.2.1.10) shikimate; E=2e-65 COG: BS_aroD; COG0169 Shikimate 5-dehydrogenase; E=4e-39 PAB0299; COG0710 3-dehydroquinate dehydratase; E=6e-18 Ta0284; COG0169 Shikimate 5-dehydrogenase; E=4e-17 PFAM: PF01487; Type I 3-dehydroquinase; E=1.6e-40 PF01488; Shikimate / quinate 5-dehydrogen; E=8e-72; 3-dehydroquinate dehydratase 3434721 1791185 RB6488 Rhodopirellula baltica SH 1 3-dehydroquinate dehydratase NP_867287.1 3433231 D 243090 CDS NP_867288.1 32474294 1795324 complement(3434765..3435940) 1 NC_005027.1 PMID: 9642221 best DB hits: BLAST: ddbj:BAA31547.1; (AB010956) metal-activated pyridoxal enzyme; E=1e-15 gb:AAG24954.1; AF242414_1 (AF242414) unknown [Paenibacillus; E=0.004 swissprot:P71683; YE14_MYCTU HYPOTHETICAL 14.3 KDA PROTEIN RV1414; E=0.65 PFAM: PF00842; Alanine racemase; E=0.0019; D-threonine aldolase, metal-activated pyridoxal enzyme 3435940 1795324 RB6489 Rhodopirellula baltica SH 1 D-threonine aldolase, metal-activated pyridoxal enzyme NP_867288.1 3434765 R 243090 CDS NP_867289.1 32474295 1796757 complement(3435918..3437117) 1 NC_005027.1 PMID: 9507020 best DB hits: BLAST: ddbj:BAB02539.1; (AP000371) DegP protease precursor [Arabidopsis; E=5e-87 swissprot:O22609; DEGP_ARATH PROTEASE DO-LIKE PRECURSOR -----; E=9e-87 ddbj:BAA98101.1; (AB024023) contains similarity to serine; E=2e-71 COG: TP0773; COG0265 Trypsin-like serine proteases, typically; E=3e-48 CT823; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=3e-37 Cj1228c; COG0265 Trypsin-like serine proteases, typically; E=2e-36 PFAM: PF00089; Trypsin; E=5.9e-26 PF00595; PDZ domain (Also known as DHR or GLG; E=0.0029; protease Do 3437117 degP 1796757 degP Rhodopirellula baltica SH 1 protease Do NP_867289.1 3435918 R 243090 CDS NP_867290.1 32474296 1790511 complement(3437096..3438676) 1 NC_005027.1 PMID: 2203540 best DB hits: BLAST: gb:AAC82369.1; (AF061965) RNA polymerase subunit sigma-54; E=1e-121 gb:AAG58336.1; AE005548_7 (AE005548) RNA polymerase, sigma(54 or; E=7e-59 swissprot:P24255; RP54_ECOLI RNA POLYMERASE SIGMA-54 FACTOR; E=2e-58 COG: rpoN; COG1508 DNA-directed RNA polymerase specialized sigma; E=2e-59 PFAM: PF00356; Bacterial regulatory proteins; E=0.018 PF00309; Sigma-54 factors family; E=4e-155; RNA polymerase subunit sigma-54 3438676 1790511 RB6491 Rhodopirellula baltica SH 1 RNA polymerase subunit sigma-54 NP_867290.1 3437096 R 243090 CDS NP_867291.1 32474297 1791389 complement(3438696..3439295) 1 NC_005027.1 PMID: 10567266 PMID: 2674903 best DB hits: BLAST: swissprot:Q9XAI4; RECR_STRCO RECOMBINATION PROTEIN RECR -----; E=3e-42 swissprot:Q9ZNA2; RECR_DEIRA RECOMBINATION PROTEIN RECR -----; E=4e-42 swissprot:O69520; RECR_MYCLE RECOMBINATION PROTEIN RECR -----; E=5e-42 COG: DR0198; COG0353 Recombinational DNA repair protein; E=4e-43 PFAM: PF00633; Helix-hairpin-helix motif.; E=0.21 PF02904; RuvA central domain II; E=0.049 PF02132; RecR protein; E=1.8e-14; recombinant protein RecR 3439295 recR 1791389 recR Rhodopirellula baltica SH 1 recombinant protein RecR NP_867291.1 3438696 R 243090 CDS NP_867292.1 32474298 1793568 complement(3439292..3439678) 1 NC_005027.1 PMID: 11823852 best DB hits: BLAST: swissprot:P17577; YBAB_ECOLI HYPOTHETICAL 12.0 KDA PROTEIN IN; E=0.12 swissprot:Q9ZCA0; Y866_RICPR HYPOTHETICAL PROTEIN RP866 -----; E=0.12 gb:AAK02289.1; (AE006055) unknown [Pasteurella multocida]; E=0.24 PFAM: PF02575; Uncharacterized BCR, YbaB family COG; E=2.7e-07; hypothetical protein 3439678 1793568 RB6493 Rhodopirellula baltica SH 1 hypothetical protein NP_867292.1 3439292 R 243090 CDS NP_867293.1 32474299 1792833 complement(3439757..3441787) 1 NC_005027.1 PMID: 10192928 PMID: 2186364 best DB hits: BLAST: ddbj:BAB03753.1; (AP001507) DNA polymerase III gamma and tau; E=9e-72 pir:S13786; DNA-directed DNA polymerase (EC 2.7.7.7) III chain dnaX; E=5e-66 swissprot:P09122; DP3X_BACSU DNA POLYMERASE III SUBUNIT GAMMATAU; E=5e-66 COG: BH0034; COG2812 DNA polymerase III, gamma/tau subunits; E=9e-73 PFAM: PF00693; Thymidine kinase from herpesviru; E=0.18 PF00004; ATPase associated with va; E=7.6e-14; DNA polymerase III gamma and tau subunits 3441787 dnaX 1792833 dnaX Rhodopirellula baltica SH 1 DNA polymerase III gamma and tau subunits NP_867293.1 3439757 R 243090 CDS NP_867294.1 32474300 1791450 complement(3441842..3441961) 1 NC_005027.1 hypothetical protein 3441961 1791450 RB6495 Rhodopirellula baltica SH 1 hypothetical protein NP_867294.1 3441842 R 243090 CDS NP_867295.1 32474301 1792488 3441948..3442121 1 NC_005027.1 hypothetical protein 3442121 1792488 RB6496 Rhodopirellula baltica SH 1 hypothetical protein NP_867295.1 3441948 D 243090 CDS NP_867296.1 32474302 1793309 3442109..3442804 1 NC_005027.1 PMID: 11823852; hypothetical protein 3442804 1793309 RB6497 Rhodopirellula baltica SH 1 hypothetical protein NP_867296.1 3442109 D 243090 CDS NP_867297.1 32474303 1796944 complement(3442214..3442882) 1 NC_005027.1 hypothetical protein 3442882 1796944 RB6498 Rhodopirellula baltica SH 1 hypothetical protein NP_867297.1 3442214 R 243090 CDS NP_867298.1 32474304 1793655 complement(3442866..3443810) 1 NC_005027.1 PMID: 10952301 best DB hits: BLAST: pir:D82351; rarD protein VC0195 [imported] - Vibrio cholerae (group; E=4e-38 embl:CAC08293.1; (AL392148) integral membrane protein; E=1e-36 gb:AAG59015.1; AE005613_8 (AE005613) orf, hypothetical protein; E=1e-35 COG: VC0195; COG2962 Predicted permeases; E=3e-39 PFAM: PF00892; Integral membrane protein DUF6; E=5.7e-12; RarD protein (chloramphenicol resistance) 3443810 rarD 1793655 rarD Rhodopirellula baltica SH 1 RarD protein (chloramphenicol resistance) NP_867298.1 3442866 R 243090 CDS NP_867299.1 32474305 1791987 complement(3443803..3454800) 1 NC_005027.1 PMID: 3880746 best DB hits: BLAST: pir:S72705; mycocerosate synthase (EC 2.3.1.111) - Mycobacterium; E=0.0 pir:H70819; probable polyketide synthase - Mycobacterium tuberculosis; E=0.0 gb:AAF62883.1; AF217189_6 (AF217189) epoD [Sorangium cellulosum]; E=1e-180 COG: PA2402_3; COG1020 Non-ribosomal peptide synthetase modules and related; E=4e-99 BS_ppsD_3; COG1020 Non-ribosomal peptide synthetase modules and; E=4e-92 PA2424_2; COG1020 Non-ribosomal peptide synthetase modules and related; E=1e-91 PFAM: PF00108; Thiolase, N-terminal domain; E=2.7e-06 PF00109; Beta-ketoacyl synthase, N-ter; E=7.7e-115 PF02801; Beta-ketoacyl synthase, C-ter; E=2.4e-81; mycocerosate synthase 3454800 1791987 RB6500 Rhodopirellula baltica SH 1 mycocerosate synthase NP_867299.1 3443803 R 243090 CDS NP_867300.1 32474306 1796759 complement(3454804..3455943) 1 NC_005027.1 PMID: 9371463 best DB hits: BLAST: pir:F69192; conserved hypothetical protein MTH695 - Methanobacterium; E=2e-30 swissprot:Q58902; YF07_METJA HYPOTHETICAL PROTEIN MJ1507 -----; E=5e-10 gb:AAB89778.1; (AE001001) conserved hypothetical protein; E=2e-09 COG: MTH695; COG0577 Predicted permease; E=2e-31 PFAM: PF02687; Predicted permease; E=4.3e-26; permease 3455943 1796759 RB6502 Rhodopirellula baltica SH 1 permease NP_867300.1 3454804 R 243090 CDS NP_867301.1 32474307 1791508 complement(3455940..3456092) 1 NC_005027.1 hypothetical protein 3456092 1791508 RB6503 Rhodopirellula baltica SH 1 hypothetical protein NP_867301.1 3455940 R 243090 CDS NP_867302.1 32474308 1795709 complement(3455959..3456120) 1 NC_005027.1 hypothetical protein 3456120 1795709 RB6504 Rhodopirellula baltica SH 1 hypothetical protein NP_867302.1 3455959 R 243090 CDS NP_867303.1 32474309 1795016 complement(3456110..3456265) 1 NC_005027.1 hypothetical protein 3456265 1795016 RB6505 Rhodopirellula baltica SH 1 hypothetical protein NP_867303.1 3456110 R 243090 CDS NP_867304.1 32474310 1795054 complement(3456133..3456243) 1 NC_005027.1 hypothetical protein 3456243 1795054 RB6506 Rhodopirellula baltica SH 1 hypothetical protein NP_867304.1 3456133 R 243090 CDS NP_867305.1 32474311 1794941 3456252..3457370 1 NC_005027.1 hypothetical protein 3457370 1794941 RB6507 Rhodopirellula baltica SH 1 hypothetical protein NP_867305.1 3456252 D 243090 CDS NP_867306.1 32474312 1796940 complement(3457390..3458832) 1 NC_005027.1 PMID: 12024217; hypothetical protein 3458832 1796940 RB6510 Rhodopirellula baltica SH 1 hypothetical protein NP_867306.1 3457390 R 243090 CDS NP_867307.1 32474313 1794929 complement(3458838..3461846) 1 NC_005027.1 hypothetical protein 3461846 1794929 RB6511 Rhodopirellula baltica SH 1 hypothetical protein NP_867307.1 3458838 R 243090 CDS NP_867308.1 32474314 1791629 complement(3461858..3462055) 1 NC_005027.1 hypothetical protein 3462055 1791629 RB6515 Rhodopirellula baltica SH 1 hypothetical protein NP_867308.1 3461858 R 243090 CDS NP_867309.1 32474315 1792180 3462062..3462598 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAC17654.1; (AL450450) ECF sigma factor; E=0.001 pir:G83282; probable sigma-70 factor, ECF subfamily PA2896; E=0.003 gb:AAA67931.1; (U16817) alternative sigma factor; E=0.014 COG: PA2896; COG1595 DNA-directed RNA polymerase specialized sigma; E=3e-04 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=3.9e-08 PF01603; Protein phosphatase 2A regulatory; E=0.46; ECF family RNA polymerase sigma factor 3462598 1792180 RB6517 Rhodopirellula baltica SH 1 ECF family RNA polymerase sigma factor NP_867309.1 3462062 D 243090 CDS NP_867310.1 32474316 1790050 3462626..3464260 1 NC_005027.1 PMID: 11062057 best DB hits: BLAST: gb:AAG32160.1; AF206329_1 (AF206329) polydom protein [Mus musculus]; E=0.28; pentaxin domain-containing protein 3464260 1790050 RB6518 Rhodopirellula baltica SH 1 pentaxin domain-containing protein NP_867310.1 3462626 D 243090 CDS NP_867311.1 32474317 1793731 complement(3464301..3465425) 1 NC_005027.1 best DB hits: BLAST: gb:AAD46732.1; AF078736_12 (AF078736) glycosyl; E=7e-20 gb:AAD50490.1; AF172324_8 (AF172324) WbnE [Escherichia coli]; E=9e-18 gb:AAF23993.1; (AF035937) WbpT [Pseudomonas aeruginosa]; E=1e-16 COG: DR1555; COG0438 Predicted glycosyltransferases; E=6e-14 PFAM: PF00534; Glycosyl transferases group 1; E=1.9e-35; glycosyl transferase 3465425 1793731 RB6520 Rhodopirellula baltica SH 1 glycosyl transferase NP_867311.1 3464301 R 243090 CDS NP_867312.1 32474318 1796941 complement(3465422..3466675) 1 NC_005027.1 hypothetical protein 3466675 1796941 RB6523 Rhodopirellula baltica SH 1 hypothetical protein NP_867312.1 3465422 R 243090 CDS NP_867313.1 32474319 1795172 complement(3466672..3467205) 1 NC_005027.1 PMID: 10192928 best DB hits: BLAST: pir:T36331; probable hypoxanthine phosphoribosyltransferase -; E=6e-27 ddbj:BAB03803.1; (AP001507) hypoxanthine-guanine; E=8e-23 embl:CAB60853.1; (AL132877) predicted using Genefinder; E=1e-22 COG: BH0084; COG0634 Hypoxanthine-guanine phosphoribosyltransferase; E=7e-24 BU169; COG0462 Phosphoribosylpyrophosphate synthetase; E=0.002 APE2071; COG2236 Predicted phosphoribosyltransferases; E=0.007 PFAM: PF00156; Phosphoribosyl transferase domai; E=1.5e-15; hypoxanthine-guanine phosphoribosyltransferase 3467205 hpt 1795172 hpt Rhodopirellula baltica SH 1 hypoxanthine-guanine phosphoribosyltransferase NP_867313.1 3466672 R 243090 CDS NP_867314.1 32474320 1794469 complement(3467212..3467454) 1 NC_005027.1 hypothetical protein 3467454 1794469 RB6525 Rhodopirellula baltica SH 1 hypothetical protein NP_867314.1 3467212 R 243090 CDS NP_867315.1 32474321 1794709 3467440..3467784 1 NC_005027.1 hypothetical protein 3467784 1794709 RB6528 Rhodopirellula baltica SH 1 hypothetical protein NP_867315.1 3467440 D 243090 CDS NP_867316.1 32474322 1795373 complement(3467807..3468520) 1 NC_005027.1 PMID: 9278503 best DB hits: BLAST: swissprot:P29217; YCEH_ECOLI HYPOTHETICAL 24.2 KDA PROTEIN IN; E=2e-19 gb:AAG55813.1; AE005317_2 (AE005317) orf, hypothetical protein; E=2e-19 pir:D83213; conserved hypothetical protein PA3453 [imported] -; E=1e-18 COG: yceH; COG3132 Uncharacterized BCR; E=1e-20 PFAM: PF01213; CAP protein; E=0.44 PF02465; Flagellar hook-associated protein 2; E=0.41 PF01519; Protein of unknown function DUF16; E=0.89; hypothetical protein 3468520 1795373 RB6530 Rhodopirellula baltica SH 1 hypothetical protein NP_867316.1 3467807 R 243090 CDS NP_867317.1 32474323 1792900 3468775..3471075 1 NC_005027.1 PMID: 8300626 best DB hits: BLAST: pir:A81368; probable 2-acylglycerophosphoethanolamine acyltransferase; E=2e-89 swissprot:P31119; AAS_ECOLI AAS BIFUNCTIONAL PROTEIN [INCLUDES:; E=5e-59 gb:AAG57948.1; AE005512_7 (AE005512); E=6e-59 COG: Cj0938c_3; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid; E=6e-66 aas_2; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases; E=6e-50 VNG1339C; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid; E=2e-28 PFAM: PF01553; Acyltransferase; E=7.6e-22 PF00501; AMP-binding enzyme; E=2.4e-07; 2-acyl-glycerophospho-ethanolamine acyltransferase 3471075 aas 1792900 aas Rhodopirellula baltica SH 1 2-acyl-glycerophospho-ethanolamine acyltransferase NP_867317.1 3468775 D 243090 CDS NP_867318.1 32474324 1790960 3471101..3471463 1 NC_005027.1 hypothetical protein 3471463 1790960 RB6534 Rhodopirellula baltica SH 1 hypothetical protein NP_867318.1 3471101 D 243090 CDS NP_867319.1 32474325 1791312 complement(3471113..3471451) 1 NC_005027.1 PMID: 12093901; hypothetical protein 3471451 1791312 RB6535 Rhodopirellula baltica SH 1 hypothetical protein NP_867319.1 3471113 R 243090 CDS NP_867320.1 32474326 1792564 complement(3471483..3471704) 1 NC_005027.1 hypothetical protein 3471704 1792564 RB6536 Rhodopirellula baltica SH 1 hypothetical protein NP_867320.1 3471483 R 243090 CDS NP_867321.1 32474327 1794134 complement(3471736..3472890) 1 NC_005027.1 PMID: 3012466 best DB hits: BLAST: embl:CAB62739.1; (AL133423) aldose 1-epimerase; E=8e-92 pir:H72395; probable aldose 1-epimerase (EC 5.1.3.3) - Thermotoga; E=4e-85 swissprot:P05149; GALM_ACICA ALDOSE 1-EPIMERASE PRECURSOR; E=2e-80 COG: TM0282; COG2017 Galactose mutarotase and related enzymes; E=3e-86 PFAM: PF01263; Aldose 1-epimerase; E=3.1e-111; aldose 1-epimerase 3472890 galM 1794134 galM Rhodopirellula baltica SH 1 aldose 1-epimerase NP_867321.1 3471736 R 243090 CDS NP_867322.1 32474328 1796586 complement(3472930..3474693) 1 NC_005027.1 uncharacterized member of the SSS superfamily of sodium-dependent solute transporters; unknown function; symporter YidK 3474693 1796586 RB6538 Rhodopirellula baltica SH 1 symporter YidK NP_867322.1 3472930 R 243090 CDS NP_867323.1 32474329 1796931 3474598..3475722 1 NC_005027.1 hypothetical protein 3475722 1796931 RB6539 Rhodopirellula baltica SH 1 hypothetical protein NP_867323.1 3474598 D 243090 CDS NP_867324.1 32474330 1795179 3475795..3476964 1 NC_005027.1 PMID: 8041620 best DB hits: BLAST: swissprot:P37390; XYLR_ECOLI XYLOSE OPERON REGULATORY PROTEIN; E=9e-48 swissprot:P45043; XYLR_HAEIN XYLOSE OPERON REGULATORY PROTEIN; E=1e-43 ddbj:BAB03212.1; (AB046360) xylose operon regulatory; E=8e-38 COG: xylR_1; COG1609 Transcriptional regulators; E=3e-25 xylR_2; COG2207 AraC-type DNA-binding domain-containing proteins; E=7e-17 PA2320; COG1609 Transcriptional regulators; E=4e-08 PFAM: PF00165; Bacterial regulatory helix-turn-heli; E=2.1e-20; xylose operon regulatory protein 3476964 1795179 RB6542 Rhodopirellula baltica SH 1 xylose operon regulatory protein NP_867324.1 3475795 D 243090 CDS NP_867325.1 32474331 1794334 complement(3476892..3477143) 1 NC_005027.1 hypothetical protein 3477143 1794334 RB6546 Rhodopirellula baltica SH 1 hypothetical protein NP_867325.1 3476892 R 243090 CDS NP_867326.1 32474332 1796765 3477191..3478189 1 NC_005027.1 hypothetical protein 3478189 1796765 RB6549 Rhodopirellula baltica SH 1 hypothetical protein NP_867326.1 3477191 D 243090 CDS NP_867327.1 32474333 1794732 3478197..3478328 1 NC_005027.1 hypothetical protein 3478328 1794732 RB6551 Rhodopirellula baltica SH 1 hypothetical protein NP_867327.1 3478197 D 243090 CDS NP_867328.1 32474334 1794124 complement(3478346..3479359) 1 NC_005027.1 PMID: 9537320 PMID: 3889910 best DB hits: BLAST: swissprot:O67695; RF2_AQUAE PEPTIDE CHAIN RELEASE FACTOR 2 (RF-2); E=3e-65 swissprot:P28367; RF2_BACSU PEPTIDE CHAIN RELEASE FACTOR 2 (RF-2); E=1e-64 pir:H82016; translation releasing factor RF-2 prfB NMA0224; E=3e-64 COG: aq_1840; COG1186 Protein chain release factor B; E=2e-66 PFAM: PF00213; ATP synthase delta (OSCP) subunit; E=0.085 PF00472; Peptidyl-tRNA hydrolase domain; E=3.4e-52; peptide chain release factor 2 3479359 prfB 1794124 prfB Rhodopirellula baltica SH 1 peptide chain release factor 2 NP_867328.1 3478346 R 243090 CDS NP_867329.1 32474335 1796951 complement(3479403..3479627) 1 NC_005027.1 hypothetical protein 3479627 1796951 RB6553 Rhodopirellula baltica SH 1 hypothetical protein NP_867329.1 3479403 R 243090 CDS NP_867330.1 32474336 1792744 3479573..3480772 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: swissprot:Q9ZDM1; TRMU_RICPR PROBABLE TRNA; E=5e-62 pir:H75357; tRNA; E=2e-53 ddbj:BAB04980.1; (AP001511); E=7e-49 COG: RP306; COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate); E=5e-63 PFAM: PF00764; Arginosuccinate synthase; E=0.0016 PF02568; Thiamine biosynthesis protein; E=0.0039; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 3480772 trmU 1792744 trmU Rhodopirellula baltica SH 1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase NP_867330.1 3479573 D 243090 CDS NP_867331.1 32474337 1792304 complement(3481050..3482471) 1 NC_005027.1 best DB hits: PFAM: PF00884; Sulfatase; E=0.0047; sulfatase 3482471 1792304 RB6556 Rhodopirellula baltica SH 1 sulfatase NP_867331.1 3481050 R 243090 CDS NP_867332.1 32474338 1794393 complement(3482475..3485186) 1 NC_005027.1 hypothetical protein 3485186 1794393 RB6557 Rhodopirellula baltica SH 1 hypothetical protein NP_867332.1 3482475 R 243090 CDS NP_867333.1 32474339 1790265 complement(3485306..3487090) 1 NC_005027.1 hypothetical protein 3487090 1790265 RB6559 Rhodopirellula baltica SH 1 hypothetical protein NP_867333.1 3485306 R 243090 CDS NP_867334.1 32474340 1793905 complement(3487063..3487173) 1 NC_005027.1 hypothetical protein 3487173 1793905 RB6562 Rhodopirellula baltica SH 1 hypothetical protein NP_867334.1 3487063 R 243090 CDS NP_867335.1 32474341 1796955 complement(3487154..3488014) 1 NC_005027.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 3488014 kdsA 1796955 kdsA Rhodopirellula baltica SH 1 2-dehydro-3-deoxyphosphooctonate aldolase NP_867335.1 3487154 R 243090 CDS NP_867336.1 32474342 1794347 complement(3488195..3489184) 1 NC_005027.1 PMID: 11214968 best DB hits: BLAST: swissprot:P39074; BMRU_BACSU BMRU PROTEIN ----- pir: F69595; E=0.057 pir:H70861; hypothetical protein Rv2252 - Mycobacterium tuberculosis; E=0.26 pir:H69995; hypothetical protein ytlR - Bacillus subtilis -----; E=0.35; protein BmrU 3489184 1794347 RB6566 Rhodopirellula baltica SH 1 protein BmrU NP_867336.1 3488195 R 243090 CDS NP_867337.1 32474343 1790548 complement(3489185..3489298) 1 NC_005027.1 hypothetical protein 3489298 1790548 RB6567 Rhodopirellula baltica SH 1 hypothetical protein NP_867337.1 3489185 R 243090 CDS NP_867338.1 32474344 1796945 3489300..3489527 1 NC_005027.1 hypothetical protein 3489527 1796945 RB6569 Rhodopirellula baltica SH 1 hypothetical protein NP_867338.1 3489300 D 243090 CDS NP_867339.1 32474345 1795071 3489550..3490014 1 NC_005027.1 signal peptide 3490014 1795071 RB6571 Rhodopirellula baltica SH 1 signal peptide NP_867339.1 3489550 D 243090 CDS NP_867340.1 32474346 1795174 complement(3490092..3491447) 1 NC_005027.1 signal peptide 3491447 1795174 RB6572 Rhodopirellula baltica SH 1 signal peptide NP_867340.1 3490092 R 243090 CDS NP_867341.1 32474347 1793348 complement(3491444..3493615) 1 NC_005027.1 hypothetical protein 3493615 1793348 RB6574 Rhodopirellula baltica SH 1 hypothetical protein NP_867341.1 3491444 R 243090 CDS NP_867342.1 32474348 1794513 complement(3493521..3493706) 1 NC_005027.1 hypothetical protein 3493706 1794513 RB6576 Rhodopirellula baltica SH 1 hypothetical protein NP_867342.1 3493521 R 243090 CDS NP_867343.1 32474349 1793175 3493739..3494956 1 NC_005027.1 signal peptide 3494956 1793175 RB6577 Rhodopirellula baltica SH 1 signal peptide NP_867343.1 3493739 D 243090 CDS NP_867344.1 32474350 1790034 complement(3495022..3495957) 1 NC_005027.1 best DB hits: PFAM: PF00036; EF hand; E=0.17; hypothetical protein 3495957 1790034 RB6578 Rhodopirellula baltica SH 1 hypothetical protein NP_867344.1 3495022 R 243090 CDS NP_867345.1 32474351 1791635 3496255..3498015 1 NC_005027.1 hypothetical protein 3498015 1791635 RB6581 Rhodopirellula baltica SH 1 hypothetical protein NP_867345.1 3496255 D 243090 CDS NP_867346.1 32474352 1794554 3498012..3501002 1 NC_005027.1 PMID: 9083068 best DB hits: BLAST: gb:AAA62535.1; (U21320) contains TPR domain-like repeats; E=0.14 gb:AAB63465.1; (U77412) O-linked GlcNAc transferase; E=0.14 PFAM: PF02836; Glycosyl hydrolases family 2,; E=0.12; O-linked GlcNAc transferase 3501002 1794554 RB6583 Rhodopirellula baltica SH 1 O-linked GlcNAc transferase NP_867346.1 3498012 D 243090 CDS NP_867347.1 32474353 1796952 complement(3501011..3501631) 1 NC_005027.1 best DB hits: BLAST: pir:C75548; hypothetical protein - Deinococcus radiodurans (strain; E=0.005; hypothetical protein 3501631 1796952 RB6586 Rhodopirellula baltica SH 1 hypothetical protein NP_867347.1 3501011 R 243090 CDS NP_867348.1 32474354 1795628 complement(3501595..3501747) 1 NC_005027.1 hypothetical protein 3501747 1795628 RB6587 Rhodopirellula baltica SH 1 hypothetical protein NP_867348.1 3501595 R 243090 CDS NP_867349.1 32474355 1792172 complement(3501744..3502583) 1 NC_005027.1 catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase 3502583 punA 1792172 punA Rhodopirellula baltica SH 1 purine nucleoside phosphorylase NP_867349.1 3501744 R 243090 CDS NP_867350.1 32474356 1796172 3502687..3505149 1 NC_005027.1 PMID: 9524235 best DB hits: BLAST: ddbj:BAA25303.1; (AB003477) hypothetical protein [Synechococcus; E=4e-04 pir:A75469; conserved hypothetical protein - Deinococcus radiodurans; E=0.099 gb:AAK03519.1; (AE006180) unknown [Pasteurella multocida]; E=0.37 COG: DR0837; COG0433 Predicted ATPase; E=0.009; ATP-binding protein 3505149 1796172 RB6590 Rhodopirellula baltica SH 1 ATP-binding protein NP_867350.1 3502687 D 243090 CDS NP_867351.1 32474357 1793401 3505079..3505396 1 NC_005027.1 hypothetical protein 3505396 1793401 RB6593 Rhodopirellula baltica SH 1 hypothetical protein NP_867351.1 3505079 D 243090 CDS NP_867352.1 32474358 1792238 complement(3505469..3506173) 1 NC_005027.1 best DB hits: BLAST: gb:AAF58230.1; (AE003814) CG12864 gene product [Drosophila; E=0.58; signal peptide 3506173 1792238 RB6595 Rhodopirellula baltica SH 1 signal peptide NP_867352.1 3505469 R 243090 CDS NP_867353.1 32474359 1794656 3505472..3506359 1 NC_005027.1 hypothetical protein 3506359 1794656 RB6594 Rhodopirellula baltica SH 1 hypothetical protein NP_867353.1 3505472 D 243090 CDS NP_867354.1 32474360 1792119 complement(3506375..3507067) 1 NC_005027.1 hypothetical protein 3507067 1792119 RB6596 Rhodopirellula baltica SH 1 hypothetical protein NP_867354.1 3506375 R 243090 CDS NP_867355.1 32474361 1791953 3507362..3508939 1 NC_005027.1 PMID: 7910580 best DB hits: BLAST: embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=1e-38 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=6e-38 pdb:1E2S; P Chain P, Crystal Structure Of An Arylsulfatase A; E=1e-37 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=2e-29 PFAM: PF00884; Sulfatase; E=6.7e-42; arylsulfatase 3508939 1791953 RB6599 Rhodopirellula baltica SH 1 arylsulfatase NP_867355.1 3507362 D 243090 CDS NP_867356.1 32474362 1795024 3508951..3509955 1 NC_005027.1 PMID: 8997703 best DB hits: BLAST: pir:C75037; methanol dehydrogenase regulatory protein (moxr-3); E=9e-65 pir:E70792; probable regulatory protein - Mycobacterium tuberculosis; E=2e-64 pir:B71126; hypothetical protein PH0776 - Pyrococcus horikoshii; E=2e-63 COG: PAB0848; COG0714 MoxR-like ATPases; E=9e-66 PFAM: PF00004; ATPase associated with; E=6.4e-06 PF02223; Thymidylate kinase; E=0.36 PF01078; Magnesium chelatase, subunit; E=4.3e-05; methanol dehydrogenase regulatory protein (MoxR) 3509955 1795024 RB6603 Rhodopirellula baltica SH 1 methanol dehydrogenase regulatory protein (MoxR) NP_867356.1 3508951 D 243090 CDS NP_867357.1 32474363 1796976 3510029..3510748 1 NC_005027.1 PMID: 1644792 best DB hits: BLAST: gb:AAA36453.1; (M95678) phospholipase C-beta-2 [Homo sapiens]; E=2e-04 gb:AAG51636.1; AC018908_2 (AC018908) unknown protein; 69131-60853; E=0.001 pir:F71318; conserved hypothetical protein TP0494 - syphilis; E=0.001 COG: TP0494; COG1579 Zn-ribbon protein, possibly nucleic acid-binding; E=1e-04 NMB1472; COG0542 ATPases with chaperone activity, ATP-binding domain; E=0.008 PFAM: PF02591; Uncharacterized ACR, COG1579; E=0.88; phospholipase C-beta-2 3510748 1796976 RB6605 Rhodopirellula baltica SH 1 phospholipase C-beta-2 NP_867357.1 3510029 D 243090 CDS NP_867358.1 32474364 1790128 3510745..3511395 1 NC_005027.1 PMID: 9784136 best DB hits: BLAST: pir:D75341; conserved hypothetical protein - Deinococcus radiodurans; E=3e-13 swissprot:O34932; YTAG_BACSU HYPOTHETICAL 22.0 KD PROTEIN IN; E=2e-12 pir:B71509; probable phosphatasekinase - Chlamydia trachomatis; E=5e-11 COG: DR1892; COG0237 Predicted nucleotide kinase; E=3e-14 PFAM: PF01583; Adenylylsulfate kinase; E=0.81 PF00485; Phosphoribulokinase / Uridine; E=0.0071 PF01121; Uncharacterized protein famil; E=1.1e-19; phosphatase/kinase 3511395 1790128 RB6607 Rhodopirellula baltica SH 1 phosphatase/kinase NP_867358.1 3510745 D 243090 CDS NP_867359.1 32474365 1796968 3511456..3511593 1 NC_005027.1 hypothetical protein 3511593 1796968 RB6609 Rhodopirellula baltica SH 1 hypothetical protein NP_867359.1 3511456 D 243090 CDS NP_867360.1 32474366 1793720 3511694..3515401 1 NC_005027.1 best DB hits: PFAM: PF00639; PPIC-type PPIASE domain.; E=0.81; hypothetical protein 3515401 1793720 RB6610 Rhodopirellula baltica SH 1 hypothetical protein NP_867360.1 3511694 D 243090 CDS NP_867361.1 32474367 1792498 3515430..3516122 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB94634.1; (AL359215) secreted glycosyl hydrolase.; E=1e-12 pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=3e-11 pir:T35028; probable glycosyl hydrolase - Streptomyces coelicolor; E=0.054; secreted glycosyl hydrolase 3516122 1792498 RB6615 Rhodopirellula baltica SH 1 secreted glycosyl hydrolase NP_867361.1 3515430 D 243090 CDS NP_867362.1 32474368 1795089 3516064..3517428 1 NC_005027.1 PMID: 8299947 best DB hits: BLAST: pir:T46882; phosphoribosylamine--glycine ligase (EC 6.3.4.13); E=1e-108 pir:I67805; purine synthesis multifunctional protein - mouse -----; E=1e-108 gb:AAC53250.1; (U20892) glycinamide ribonucleotide synthetase; E=1e-107 COG: BH0634; COG0151 Phosphoribosylamine-glycine ligase; E=1e-108 PFAM: PF02844; Phosphoribosylglycinamide syn; E=6.3e-55 PF02842; Phosphoribosylglycinamide syn; E=2.5e-30 PF01837; Domain of unknown function DU; E=0.23; phosphoribosylamine-glycine ligase 3517428 purD 1795089 purD Rhodopirellula baltica SH 1 phosphoribosylamine-glycine ligase NP_867362.1 3516064 D 243090 CDS NP_867363.1 32474369 1790480 complement(3517503..3518291) 1 NC_005027.1 hypothetical protein 3518291 1790480 RB6619 Rhodopirellula baltica SH 1 hypothetical protein NP_867363.1 3517503 R 243090 CDS NP_867364.1 32474370 1792209 complement(3518213..3519400) 1 NC_005027.1 PMID: 10710307 PMID: 9670013 best DB hits: BLAST: gb:AAK04063.1; (AE006234) unknown [Pasteurella multocida]; E=2e-06 pir:A81794; probable rotamase NMA2206 [imported] - Neisseria; E=7e-05 pir:B81216; peptidyl-prolyl cis-trans isomerase NMB0281 [imported] -; E=1e-04 COG: NMB0281; COG0760 Parvulin-like peptidyl-prolyl isomerase; E=1e-05 PFAM: PF00639; PPIC-type PPIASE domain.; E=0.0032; peptidyl-prolyl cis-trans isomerase 3519400 ppiD 1792209 ppiD Rhodopirellula baltica SH 1 peptidyl-prolyl cis-trans isomerase NP_867364.1 3518213 R 243090 CDS NP_867365.1 32474371 1790682 3519584..3520531 1 NC_005027.1 PMID: 10910347 best DB hits: BLAST: pir:B82621; nicotinate-mononucleotide pyrophosphorylase XF1925; E=4e-45 swissprot:P77938; NADC_RHORU PROBABLE NICOTINATE-NUCLEOTIDE; E=4e-43 gb:AAG47789.1; AF311738_5 (AF311738) NadC [Mesorhizobium loti]; E=4e-39 COG: XF1925; COG0157 Nicotinate-nucleotide pyrophosphorylase; E=4e-46 PFAM: PF00364; Biotin-requiring enzyme; E=0.5 PF02749; Quinolinate phosphoribosyl tran; E=8.9e-16 PF01729; Quinolinate phosphoribosyl tran; E=1.1e-32; nicotinate-mononucleotide pyrophosphorylase 3520531 nadC 1790682 nadC Rhodopirellula baltica SH 1 nicotinate-mononucleotide pyrophosphorylase NP_867365.1 3519584 D 243090 CDS NP_867366.1 32474372 1792244 3520589..3522100 1 NC_005027.1 PMID: 10952301 best DB hits: BLAST: pir:D82262; probable capsular polysaccharide biosynthesis; E=3e-87 gb:AAG57107.1; AE005430_7 (AE005430) colanic acid; E=4e-82 swissprot:P71241; WCAJ_ECOLI COLANIC BIOSYNTHESIS; E=5e-82 COG: VC0934; COG2148 Sugar transferases involved in lipopolysaccharide; E=3e-88 PFAM: PF02397; Bacterial sugar transferase; E=0.25; capsular polysaccharide biosynthesis glycosyltransferase 3522100 1792244 RB6624 Rhodopirellula baltica SH 1 capsular polysaccharide biosynthesis glycosyltransferase NP_867366.1 3520589 D 243090 CDS NP_867367.1 32474373 1796753 3522169..3522699 1 NC_005027.1 hypothetical protein 3522699 1796753 RB6627 Rhodopirellula baltica SH 1 hypothetical protein NP_867367.1 3522169 D 243090 CDS NP_867368.1 32474374 1794356 3522700..3522840 1 NC_005027.1 hypothetical protein 3522840 1794356 RB6628 Rhodopirellula baltica SH 1 hypothetical protein NP_867368.1 3522700 D 243090 CDS NP_867369.1 32474375 1791007 3522859..3524985 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: pir:F72424; hypothetical protein - Thermotoga maritima (strain MSB8); E=0.28; hypothetical protein 3524985 1791007 RB6629 Rhodopirellula baltica SH 1 hypothetical protein NP_867369.1 3522859 D 243090 CDS NP_867370.1 32474376 1791829 3524963..3525130 1 NC_005027.1 hypothetical protein 3525130 1791829 RB6632 Rhodopirellula baltica SH 1 hypothetical protein NP_867370.1 3524963 D 243090 CDS NP_867371.1 32474377 1796971 3525143..3525742 1 NC_005027.1 hypothetical protein 3525742 1796971 RB6633 Rhodopirellula baltica SH 1 hypothetical protein NP_867371.1 3525143 D 243090 CDS NP_867372.1 32474378 1792051 3525785..3526882 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 3526882 1792051 RB6634 Rhodopirellula baltica SH 1 signal peptide NP_867372.1 3525785 D 243090 CDS NP_867373.1 32474379 1792448 3527005..3528306 1 NC_005027.1 best DB hits: BLAST: gb:AAD45539.1; U70376_1 (U70376) InsA [Streptomyces netropsis]; E=5e-33 gb:AAG60893.1; AF322013_12 (AF322013) ID460 [Bradyrhizobium; E=8e-33 ddbj:BAA19966.1; (D63923) transposase [Acetobacter pasteurianus]; E=1e-26; transposase 3528306 1792448 RB6636 Rhodopirellula baltica SH 1 transposase NP_867373.1 3527005 D 243090 CDS NP_867374.1 32474380 1792959 3528317..3528469 1 NC_005027.1 hypothetical protein 3528469 1792959 RB6637 Rhodopirellula baltica SH 1 hypothetical protein NP_867374.1 3528317 D 243090 CDS NP_867375.1 32474381 1793505 complement(3528359..3528514) 1 NC_005027.1 hypothetical protein 3528514 1793505 RB6638 Rhodopirellula baltica SH 1 hypothetical protein NP_867375.1 3528359 R 243090 CDS NP_867376.1 32474382 1797032 complement(3528517..3529980) 1 NC_005027.1 hypothetical protein 3529980 1797032 RB6639 Rhodopirellula baltica SH 1 hypothetical protein NP_867376.1 3528517 R 243090 CDS NP_867377.1 32474383 1795224 complement(3529970..3530587) 1 NC_005027.1 PMID: 7961421 best DB hits: BLAST: gb:AAF01335.1; AF190580_1 (AF190580) alternate sigma factor AlgT; E=2e-09 pir:A69872; RNA polymerase ECF-type sigma factor homolog ylaC -; E=2e-09 swissprot:Q06198; RPSH_PSEAE RNA POLYMERASE SIGMA-H FACTOR; E=2e-09 COG: BS_ylaC; COG1595 DNA-directed RNA polymerase specialized sigma; E=2e-10 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=5.5e-14; RNA polymerase ECF-type sigma factor 3530587 1795224 RB6643 Rhodopirellula baltica SH 1 RNA polymerase ECF-type sigma factor NP_867377.1 3529970 R 243090 CDS NP_867378.1 32474384 1795809 complement(3530698..3534084) 1 NC_005027.1 PMID: 10684935 best DB hits: BLAST: gb:AAF73522.1; (AE002272) serinethreonine-protein kinase; E=6e-05 pir:E71486; probable st protein kinase - Chlamydia trachomatis; E=3e-04 swissprot:P54737; PKN5_MYXXA SERINETHREONINE-PROTEIN KINASE PKN5; E=0.001 COG: CT673; COG0515 Serine/threonine protein kinases; E=3e-05 PFAM: PF00069; Protein kinase domain; E=0.21; serine/threonine-protein kinase 3534084 1795809 RB6644 Rhodopirellula baltica SH 1 serine/threonine-protein kinase NP_867378.1 3530698 R 243090 CDS NP_867379.1 32474385 1793213 complement(3534121..3534261) 1 NC_005027.1 hypothetical protein 3534261 1793213 RB6653 Rhodopirellula baltica SH 1 hypothetical protein NP_867379.1 3534121 R 243090 CDS NP_867380.1 32474386 1796909 3534225..3535748 1 NC_005027.1 PMID: 10360571 PMID: 3097003 best DB hits: BLAST: pir:H72321; glycogen synthase - Thermotoga maritima (strain MSB8); E=6e-79 gb:AAK04797.1; AE006303_3 (AE006303) glycogen synthase (EC; E=1e-77 swissprot:O08328; GLGA_BACST GLYCOGEN SYNTHASE (STARCH [BACTERIAL; E=2e-76 COG: TM0895; COG0297 Glycogen synthase; E=6e-80 BH1415_2; COG0438 Predicted glycosyltransferases; E=6e-10 PH0069; COG0297 Glycogen synthase; E=7e-09 PFAM: PF00534; Glycosyl transferases group 1; E=8.9e-10; glycogen synthase 3535748 glgA 1796909 glgA Rhodopirellula baltica SH 1 glycogen synthase NP_867380.1 3534225 D 243090 CDS NP_867381.1 32474387 1791896 complement(3535719..3535829) 1 NC_005027.1 hypothetical protein 3535829 1791896 RB6655 Rhodopirellula baltica SH 1 hypothetical protein NP_867381.1 3535719 R 243090 CDS NP_867382.1 32474388 1796264 3535887..3537278 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: pir:A72322; hypothetical protein TM0896 - Thermotoga maritima; E=3e-47 ddbj:BAB09478.1; (AB012246) galactose-1-phosphate uridyl; E=1e-36 gb:AAF64398.1; AF148553_2 (AF148553) adenylylsulfate:phosphate; E=1e-35 COG: TM0896; COG1085 Galactose-1-phosphate uridylyltransferase; E=3e-48; galactose-1-phosphate uridylyltransferase 3537278 galT 1796264 galT Rhodopirellula baltica SH 1 galactose-1-phosphate uridylyltransferase NP_867382.1 3535887 D 243090 CDS NP_867383.1 32474389 1794853 3537387..3538430 1 NC_005027.1 signal peptide 3538430 1794853 RB6658 Rhodopirellula baltica SH 1 signal peptide NP_867383.1 3537387 D 243090 CDS NP_867384.1 32474390 1794578 complement(3538486..3538752) 1 NC_005027.1 hypothetical protein 3538752 1794578 RB6661 Rhodopirellula baltica SH 1 hypothetical protein NP_867384.1 3538486 R 243090 CDS NP_867385.1 32474391 1792154 complement(3538870..3540255) 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: pir:G72299; conserved hypothetical protein - Thermotoga maritima; E=0.001 gb:AAB88948.1; (AE000945) conserved hypothetical transmembrane; E=0.21 COG: TM1060; COG0477 Permeases of the major facilitator superfamily; E=1e-04; hypothetical protein 3540255 1792154 RB6663 Rhodopirellula baltica SH 1 hypothetical protein NP_867385.1 3538870 R 243090 CDS NP_867386.1 32474392 1789950 3540415..3541137 1 NC_005027.1 hypothetical protein 3541137 1789950 RB6666 Rhodopirellula baltica SH 1 hypothetical protein NP_867386.1 3540415 D 243090 CDS NP_867387.1 32474393 1796230 3541134..3541280 1 NC_005027.1 hypothetical protein 3541280 1796230 RB6667 Rhodopirellula baltica SH 1 hypothetical protein NP_867387.1 3541134 D 243090 CDS NP_867388.1 32474394 1795107 3541244..3543304 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: pir:T36106; hypothetical protein SCE15.03c - Streptomyces coelicolor; E=3e-87 pir:A83179; conserved hypothetical protein PA3729 [imported] -; E=4e-73 gb:AAG58185.1; AE005534_7 (AE005534) membrane protein; E=2e-28 COG: PA3729; COG2268 Uncharacterized BCR; E=4e-74; hypothetical protein 3543304 1795107 RB6668 Rhodopirellula baltica SH 1 hypothetical protein NP_867388.1 3541244 D 243090 CDS NP_867389.1 32474395 1792719 3543307..3548661 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:D83181; hypothetical protein PA3728 [imported] - Pseudomonas; E=0.0 pir:T36105; probable large glycinealanine rich protein - Streptomyces; E=1e-165 pir:D75436; ATP-dependent Clp proteinase, ATP-binding subunit ClpC -; E=0.19 PFAM: PF00004; ATPase associated with; E=0.00026; hypothetical protein 3548661 1792719 RB6669 Rhodopirellula baltica SH 1 hypothetical protein NP_867389.1 3543307 D 243090 CDS NP_867390.1 32474396 1791815 3548700..3549818 1 NC_005027.1 best DB hits: BLAST: pir:G82243; conserved hypothetical protein VC1079 [imported] -; E=1e-42 pir:F75007; sua5 related protein PAB1302 - Pyrococcus abyssi (strain; E=5e-41 embl:CAB57638.1; (Y18930) hypothetical protein [Sulfolobus; E=2e-39 COG: VC1079; COG0009 translation factor (SUA5); E=1e-43 PFAM: PF01300; SUA5/yciO/yrdC family; E=2.7e-50; translation factor 3549818 1791815 RB6670 Rhodopirellula baltica SH 1 translation factor NP_867390.1 3548700 D 243090 CDS NP_867391.1 32474397 1796643 complement(3549836..3550681) 1 NC_005027.1 PMID: 98151343 best DB hits: BLAST: gb:AAF55179.1; (AE003708) CG5038 gene product [Drosophila; E=4e-10 gb:AAF26789.1; AC016829_13 (AC016829) O-linked GlcNAc; E=4e-09 ddbj:BAB21885.1; (AB055261) hypothetical protein [Macaca; E=2e-08 COG: MTH72; COG0457 TPR-repeat-containing proteins; E=4e-07 PFAM: PF00515; TPR Domain; E=1.6e-05; hypothetical protein 3550681 1796643 RB6671 Rhodopirellula baltica SH 1 hypothetical protein NP_867391.1 3549836 R 243090 CDS NP_867392.1 32474398 1791156 complement(3550668..3550829) 1 NC_005027.1 hypothetical protein 3550829 1791156 RB6676 Rhodopirellula baltica SH 1 hypothetical protein NP_867392.1 3550668 R 243090 CDS NP_867393.1 32474399 1790533 3550883..3551071 1 NC_005027.1 hypothetical protein 3551071 1790533 RB6677 Rhodopirellula baltica SH 1 hypothetical protein NP_867393.1 3550883 D 243090 CDS NP_867394.1 32474400 1793155 3551127..3551480 1 NC_005027.1 hypothetical protein 3551480 1793155 RB6678 Rhodopirellula baltica SH 1 hypothetical protein NP_867394.1 3551127 D 243090 CDS NP_867395.1 32474401 1791762 3551491..3551718 1 NC_005027.1 PMID: 10731132 best DB hits: BLAST: gb:AAF57913.1; (AE003804) CG9642 gene product [Drosophila; E=0.032; hypothetical protein 3551718 1791762 RB6680 Rhodopirellula baltica SH 1 hypothetical protein NP_867395.1 3551491 D 243090 CDS NP_867396.1 32474402 1797093 3551775..3552194 1 NC_005027.1 hypothetical protein 3552194 1797093 RB6681 Rhodopirellula baltica SH 1 hypothetical protein NP_867396.1 3551775 D 243090 CDS NP_867397.1 32474403 1795028 complement(3552246..3553733) 1 NC_005027.1 PMID: 2337600 PMID: 6380576 best DB hits: BLAST: gb:AAF04133.1; AF191033_1 (AF191033) citrate synthase; E=1e-152 embl:CAB66275.1; (AL136519) citrate synthase. [Streptomyces; E=1e-149 swissprot:Q10530; CISY_MYCTU CITRATE SYNTHASE 1 ----- pir:; E=1e-145 COG: Rv0896; COG0372 Citrate synthase; E=1e-146 PFAM: PF00285; Citrate synthase; E=1e-208; citrate synthase 3553733 gltA 1795028 gltA Rhodopirellula baltica SH 1 citrate synthase NP_867397.1 3552246 R 243090 CDS NP_867398.1 32474404 1796318 complement(3553717..3554034) 1 NC_005027.1 hypothetical protein 3554034 1796318 RB6684 Rhodopirellula baltica SH 1 hypothetical protein NP_867398.1 3553717 R 243090 CDS NP_867399.1 32474405 1791159 complement(3554047..3554265) 1 NC_005027.1 hypothetical protein 3554265 1791159 RB6685 Rhodopirellula baltica SH 1 hypothetical protein NP_867399.1 3554047 R 243090 CDS NP_867400.1 32474406 1791800 3554230..3555036 1 NC_005027.1 PMID: 10484179 PMID: 9878437 best DB hits: BLAST: ddbj:BAB06876.1; (AP001517) two-component response regulator; E=9e-39 gb:AAG43239.1; AF123314_2 (AF123314) response regulator; E=5e-38 gb:AAG09797.1; AF258346_2 (AF258346) response regulator RegX3; E=7e-38 COG: BH3157; COG0745 Response regulators consisting of a CheY-like; E=9e-40 phoB; COG0745 Response regulators consisting of a CheY-like receiver; E=5e-31 BH1580; COG0745 Response regulators consisting of a CheY-like; E=1e-30 PFAM: PF00072; Response regulator receiver doma; E=8.3e-31 PF00486; Transcriptional regulatory prote; E=2.9e-24; two-component response regulator 3555036 1791800 RB6686 Rhodopirellula baltica SH 1 two-component response regulator NP_867400.1 3554230 D 243090 CDS NP_867401.1 32474407 1790303 3555061..3555747 1 NC_005027.1 PMID: 1089067 PMID: 3520487 best DB hits: BLAST: pir:B75415; superoxide dismutase (EC 1.15.1.1) (Mn) DR1279; E=7e-82 ddbj:BAB05128.1; (AP001511) superoxide dismutase [Bacillus; E=3e-75 embl:CAA05291.1; (AJ002279) manganese superoxide dismutase; E=9e-75 COG: DR1279; COG0605 Superoxide dismutase; E=6e-83 PFAM: PF00081; Iron/manganese superoxide dismutases; E=2.4e-53 PF02777; Iron/manganese superoxide dismutases; E=5.3e-69; Mn family superoxide dismutase 3555747 sodA 1790303 sodA Rhodopirellula baltica SH 1 Mn family superoxide dismutase NP_867401.1 3555061 D 243090 CDS NP_867402.2 161579031 1797088 3555896..3556918 1 NC_005027.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 3556918 fba 1797088 fba Rhodopirellula baltica SH 1 fructose-1,6-bisphosphate aldolase NP_867402.2 3555896 D 243090 CDS NP_867403.1 32474409 1791066 3556962..3557465 1 NC_005027.1 hypothetical protein 3557465 1791066 RB6691 Rhodopirellula baltica SH 1 hypothetical protein NP_867403.1 3556962 D 243090 CDS NP_867404.1 32474410 1791899 3557535..3557960 1 NC_005027.1 hypothetical protein 3557960 1791899 RB6693 Rhodopirellula baltica SH 1 hypothetical protein NP_867404.1 3557535 D 243090 CDS NP_867405.1 32474411 1797010 complement(3557988..3558311) 1 NC_005027.1 hypothetical protein 3558311 1797010 RB6696 Rhodopirellula baltica SH 1 hypothetical protein NP_867405.1 3557988 R 243090 CDS NP_867406.1 32474412 1796587 complement(3558301..3558933) 1 NC_005027.1 best DB hits: PFAM: PF01909; Nucleotidyltransferase domain; E=0.00053; hypothetical protein 3558933 1796587 RB6697 Rhodopirellula baltica SH 1 hypothetical protein NP_867406.1 3558301 R 243090 CDS NP_867407.1 32474413 1790082 complement(3558935..3559774) 1 NC_005027.1 PMID: 10413667 best DB hits: BLAST: gb:AAD24810.1; (AF003958) unknown [Acinetobacter sp. SUN]; E=0.004 swissprot:P05530; MCBG_ECOLI MCBG PROTEIN ----- pir: S00837; E=0.17 pir:I50531; transmembrane transporter - electric ray (Discopyge; E=0.26 PFAM: PF00805; Pentapeptide repeats (8 copies); E=3.4e-05; hypothetical protein 3559774 1790082 RB6698 Rhodopirellula baltica SH 1 hypothetical protein NP_867407.1 3558935 R 243090 CDS NP_867408.1 32474414 1792190 3559781..3559924 1 NC_005027.1 hypothetical protein 3559924 1792190 RB6699 Rhodopirellula baltica SH 1 hypothetical protein NP_867408.1 3559781 D 243090 CDS NP_867409.1 32474415 1795919 3559944..3560207 1 NC_005027.1 hypothetical protein 3560207 1795919 RB6701 Rhodopirellula baltica SH 1 hypothetical protein NP_867409.1 3559944 D 243090 CDS NP_867410.1 32474416 1792252 complement(3560183..3560371) 1 NC_005027.1 hypothetical protein 3560371 1792252 RB6702 Rhodopirellula baltica SH 1 hypothetical protein NP_867410.1 3560183 R 243090 CDS NP_867411.1 32474417 1793723 complement(3560295..3560822) 1 NC_005027.1 hypothetical protein 3560822 1793723 RB6703 Rhodopirellula baltica SH 1 hypothetical protein NP_867411.1 3560295 R 243090 CDS NP_867412.1 32474418 1794125 complement(3560829..3560942) 1 NC_005027.1 hypothetical protein 3560942 1794125 RB6706 Rhodopirellula baltica SH 1 hypothetical protein NP_867412.1 3560829 R 243090 CDS NP_867413.1 32474419 1797059 complement(3561015..3562985) 1 NC_005027.1 PMID: 6268937 best DB hits: BLAST: swissprot:P03835; YI41_ECOLI INSERTION ELEMENT IS4 HYPOTHETICAL; E=0.003 gb:AAC72261.1; (U91581) transposase [Lactococcus lactis; E=0.010 gb:AAF27554.1; (AF179847) transposase [Lactococcus; E=0.010 COG: yi41; COG3385 Predicted transposase; E=2e-04 PFAM: PF01609; Transposase (IS4 family); E=0.024; transposase 3562985 1797059 RB6707 Rhodopirellula baltica SH 1 transposase NP_867413.1 3561015 R 243090 CDS NP_867414.1 32474420 1793452 complement(3562975..3563853) 1 NC_005027.1 PMID: 7496528 best DB hits: BLAST: gb:AAA88919.1; (U13013) ORFB [Leptospira interrogans]; E=5e-47 gb:AAA88916.1; (U13012) ORFB [Leptospira interrogans]; E=2e-46 gb:AAC05649.1; (AF038931) probable transposase-related protein; E=8e-46 COG: tra5_g4; COG2801 transposase; E=2e-35 PFAM: PF00665; Integrase core domain; E=4.8e-40; transposase 3563853 1793452 RB6708 Rhodopirellula baltica SH 1 transposase NP_867414.1 3562975 R 243090 CDS NP_867415.1 32474421 1791544 complement(3563856..3564146) 1 NC_005027.1 PMID: 2824781 best DB hits: BLAST: gb:AAG58100.1; AE005527_3 (AE005527) unknown protein encoded by; E=0.002 gb:AAG53987.1; AF327445_1 (AF327445) transposase A; E=0.003 gb:AAF28119.1; AF153317_15 (AF153317) InsA [Shigella; E=0.007 COG: PA1937; COG2963 Transposase; E=0.004 PFAM: PF01381; Helix-turn-helix; E=0.53 PF01527; Transposase; E=6.1e-18; transposase A 3564146 1791544 RB6709 Rhodopirellula baltica SH 1 transposase A NP_867415.1 3563856 R 243090 CDS NP_867416.1 32474422 1791948 complement(3564510..3564737) 1 NC_005027.1 hypothetical protein 3564737 1791948 RB6711 Rhodopirellula baltica SH 1 hypothetical protein NP_867416.1 3564510 R 243090 CDS NP_867417.1 32474423 1795792 3564597..3564908 1 NC_005027.1 hypothetical protein 3564908 1795792 RB6712 Rhodopirellula baltica SH 1 hypothetical protein NP_867417.1 3564597 D 243090 CDS NP_867418.1 32474424 1791983 complement(3564826..3565773) 1 NC_005027.1 hypothetical protein 3565773 1791983 RB6713 Rhodopirellula baltica SH 1 hypothetical protein NP_867418.1 3564826 R 243090 CDS NP_867419.1 32474425 1790181 complement(3565803..3567209) 1 NC_005027.1 PMID: 1535622 best DB hits: BLAST: pir:F71205; hypothetical protein PH1912 - Pyrococcus horikoshii; E=3e-37 pir:F72315; conserved hypothetical protein - Thermotoga maritima; E=4e-37 pir:C75019; transport protein PAB1107 - Pyrococcus abyssi (strain; E=3e-36 COG: PH1912; COG1055 Na+/H+ antiporter NhaD and related arsenite; E=3e-38 arsB; COG1055 Na+/H+ antiporter NhaD and related arsenite permeases; E=6e-14 BH2999; COG1055 Na+/H+ antiporter NhaD and related arsenite; E=4e-13; transport protein- arsenite transport 3567209 1790181 RB6716 Rhodopirellula baltica SH 1 transport protein- arsenite transport NP_867419.1 3565803 R 243090 CDS NP_867420.1 32474426 1792486 complement(3567413..3567772) 1 NC_005027.1 hypothetical protein 3567772 1792486 RB6719 Rhodopirellula baltica SH 1 hypothetical protein NP_867420.1 3567413 R 243090 CDS NP_867421.1 32474427 1794842 3567752..3567970 1 NC_005027.1 hypothetical protein 3567970 1794842 RB6720 Rhodopirellula baltica SH 1 hypothetical protein NP_867421.1 3567752 D 243090 CDS NP_867422.1 32474428 1796766 complement(3568026..3569195) 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 3569195 1796766 RB6722 Rhodopirellula baltica SH 1 signal peptide NP_867422.1 3568026 R 243090 CDS NP_867423.1 32474429 1794741 3569189..3569584 1 NC_005027.1 hypothetical protein 3569584 1794741 RB6724 Rhodopirellula baltica SH 1 hypothetical protein NP_867423.1 3569189 D 243090 CDS NP_867424.1 32474430 1796093 complement(3569667..3570638) 1 NC_005027.1 PMID: 9464382 best DB hits: BLAST: gb:AAC38151.1; (AF034088) lipase [Pseudomonas sp. B11-1]; E=4e-34 ddbj:BAA82510.1; (AB029896) esterase HDE [petroleum-degrading; E=3e-33 gb:AAB89533.1; (AE000985) carboxylesterase (estA) [Archaeoglobus; E=2e-30 COG: AF1716; COG0657 Acetyl esterase; E=2e-31 PFAM: PF00135; Carboxylesterase; E=0.75 PF00326; Prolyl oligopeptidase; E=0.72 PF00561; alpha/beta hydrolase fold; E=0.27; lipase 3570638 1796093 RB6725 Rhodopirellula baltica SH 1 lipase NP_867424.1 3569667 R 243090 CDS NP_867425.1 32474431 1797017 3570581..3570922 1 NC_005027.1 hypothetical protein 3570922 1797017 RB6728 Rhodopirellula baltica SH 1 hypothetical protein NP_867425.1 3570581 D 243090 CDS NP_867426.1 32474432 1790859 3570858..3571640 1 NC_005027.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 3571640 deoC 1790859 deoC Rhodopirellula baltica SH 1 deoxyribose-phosphate aldolase NP_867426.1 3570858 D 243090 CDS NP_867427.1 32474433 1792845 complement(3571668..3573215) 1 NC_005027.1 hypothetical protein 3573215 1792845 RB6730 Rhodopirellula baltica SH 1 hypothetical protein NP_867427.1 3571668 R 243090 CDS NP_867428.1 32474434 1796655 3573171..3573812 1 NC_005027.1 hypothetical protein 3573812 1796655 RB6731 Rhodopirellula baltica SH 1 hypothetical protein NP_867428.1 3573171 D 243090 CDS NP_867429.1 32474435 1794039 3573460..3576996 1 NC_005027.1 PMID: 1683466 PMID: 8550462 best DB hits: BLAST: swissprot:O84604; TOLB_CHLTR TOLB PROTEIN PRECURSOR ----- pir:; E=0.006 pir:F81653; tolB protein, probable TC0888 [imported] - Chlamydia; E=0.014 pir:E75551; probable acyl-peptide hydrolase - Deinococcus radiodurans; E=0.020 COG: CT599; COG0823 Periplasmic component of the Tol biopolymer transport; E=5e-04 DR0165; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; E=0.002 HI0382; COG0823 Periplasmic component of the Tol biopolymer transport; E=0.005; TolB protein, protein/colicin/DNA uptake system 3576996 tolB 1794039 tolB Rhodopirellula baltica SH 1 TolB protein, protein/colicin/DNA uptake system NP_867429.1 3573460 D 243090 CDS NP_867430.1 32474436 1793581 complement(3577198..3577353) 1 NC_005027.1 hypothetical protein 3577353 1793581 RB6734 Rhodopirellula baltica SH 1 hypothetical protein NP_867430.1 3577198 R 243090 CDS NP_867431.1 32474437 1794566 complement(3577388..3577540) 1 NC_005027.1 hypothetical protein 3577540 1794566 RB6735 Rhodopirellula baltica SH 1 hypothetical protein NP_867431.1 3577388 R 243090 CDS NP_867432.1 32474438 1794104 complement(3577551..3578852) 1 NC_005027.1 best DB hits: BLAST: gb:AAD45539.1; U70376_1 (U70376) InsA [Streptomyces netropsis]; E=5e-33 gb:AAG60893.1; AF322013_12 (AF322013) ID460 [Bradyrhizobium; E=8e-33 ddbj:BAA19966.1; (D63923) transposase [Acetobacter pasteurianus]; E=1e-26; transposase 3578852 1794104 RB6736 Rhodopirellula baltica SH 1 transposase NP_867432.1 3577551 R 243090 CDS NP_867433.1 32474439 1796140 3579027..3579389 1 NC_005027.1 hypothetical protein 3579389 1796140 RB6738 Rhodopirellula baltica SH 1 hypothetical protein NP_867433.1 3579027 D 243090 CDS NP_867434.1 32474440 1791248 3579474..3580466 1 NC_005027.1 PMID: 9639599 best DB hits: BLAST: gb:AAC05180.1; (U74652) nonspecific acid phosphatase precursor; E=1e-105 PFAM: PF00702; haloacid dehalogenase-like hydr; E=0.0014; nonspecific acid phosphatase precursor 3580466 1791248 RB6740 Rhodopirellula baltica SH 1 nonspecific acid phosphatase precursor NP_867434.1 3579474 D 243090 CDS NP_867435.1 32474441 1791155 complement(3580591..3583347) 1 NC_005027.1 hypothetical protein 3583347 1791155 RB6742 Rhodopirellula baltica SH 1 hypothetical protein NP_867435.1 3580591 R 243090 CDS NP_867436.1 32474442 1794067 complement(3583390..3583503) 1 NC_005027.1 hypothetical protein 3583503 1794067 RB6745 Rhodopirellula baltica SH 1 hypothetical protein NP_867436.1 3583390 R 243090 CDS NP_867437.1 32474443 1797056 complement(3583522..3584742) 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: gb:AAC82905.1; (AF016485) ORF H1434 [Halobacterium sp. NRC-1]; E=1e-29 embl:CAB61860.1; (AL133252) methyltransferase; E=5e-24 gb:AAF00618.1; AF166383_1 (AF166383) methyltransferase [Mus; E=3e-19 COG: slr0303; COG0500 SAM-dependent methyltransferases; E=1e-13 VC0083; COG2226 Methylase involved in ubiquinone/menaquinone; E=1e-07 VNG1280C; COG0500 SAM-dependent methyltransferases; E=0.001 PFAM: PF01209; ubiE/COQ5 methyltransferase f; E=0.026; methyltransferase 3584742 1797056 RB6746 Rhodopirellula baltica SH 1 methyltransferase NP_867437.1 3583522 R 243090 CDS NP_867438.1 32474444 1791095 complement(3584705..3585703) 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S76979; hypothetical protein - Synechocystis sp. (strain PCC; E=3e-56 embl:CAC24148.1; (AL512973) Hypothetical protein [Sulfolobus; E=5e-05 pir:C83581; heme d1 biosynthesis protein NirJ PA0511 [imported] -; E=0.016 COG: slr0304; COG0535 Predicted Fe-S oxidoreductases; E=3e-57; Fe-S oxidoreductase 3585703 1791095 RB6747 Rhodopirellula baltica SH 1 Fe-S oxidoreductase NP_867438.1 3584705 R 243090 CDS NP_867439.1 32474445 1796222 complement(3585763..3586152) 1 NC_005027.1 PMID: 7540906; hypothetical protein 3586152 1796222 RB6749 Rhodopirellula baltica SH 1 hypothetical protein NP_867439.1 3585763 R 243090 CDS NP_867440.1 32474446 1791420 3586111..3588690 1 NC_005027.1 PMID: 8016066 best DB hits: BLAST: pir:T36384; probable ATP-binding proteinase - Streptomyces; E=0.0 swissprot:P37571; CLPC_BACSU NEGATIVE REGULATOR OF GENETIC; E=0.0 ddbj:BAB03822.1; (AP001507) class III stress response-related; E=0.0 COG: BS_clpC; COG0542 ATPases with chaperone activity, ATP-binding domain; E=0.0 PFAM: PF02861; Clp amino terminal domain; E=7.5e-19 PF00004; ATPase associated with; E=1.6e-12 PF02151; UvrB/uvrC motif; E=2.3e-09; negative regulator of genetic competence ClpC/MecB 3588690 clpC 1791420 clpC Rhodopirellula baltica SH 1 negative regulator of genetic competence ClpC/MecB NP_867440.1 3586111 D 243090 CDS NP_867441.1 32474447 1795299 3588713..3590266 1 NC_005027.1 PMID: 3057324 best DB hits: BLAST: gb:AAG61067.1; AF322013_186 (AF322013) ID893 [Bradyrhizobium; E=7e-72 swissprot:P12679; PABB_KLEAE PARA-AMINOBENZOATE SYNTHASE COMPONENT; E=4e-59 gb:AAG56801.1; AE005404_4 (AE005404) p-aminobenzoate synthetase,; E=2e-57 COG: pabB; COG0147 Anthranilate/para-aminobenzoate synthases component I; E=4e-58 VC1303; COG0147 Anthranilate/para-aminobenzoate synthases component; E=4e-57 VNG0384G; COG0147 Anthranilate/para-aminobenzoate synthases; E=1e-45 PFAM: PF00425; chorismate binding enzyme; E=2.4e-103; para-aminobenzoate synthase component I 3590266 pabB 1795299 pabB Rhodopirellula baltica SH 1 para-aminobenzoate synthase component I NP_867441.1 3588713 D 243090 CDS NP_867442.1 32474448 1797006 complement(3590294..3592045) 1 NC_005027.1 Catalyzes the specific recognition and activation of amino acids during peptide synthesis; peptide synthase 3592045 1797006 RB6755 Rhodopirellula baltica SH 1 peptide synthase NP_867442.1 3590294 R 243090 CDS NP_867443.1 32474449 1794723 complement(3592032..3593075) 1 NC_005027.1 PMID: 2570347 best DB hits: BLAST: gb:AAG32952.1; (AF032114) unknown [Methylobacterium extorquens]; E=3e-16 swissprot:Q58037; Y620_METJA HYPOTHETICAL PROTEIN MJ0620 -----; E=5e-15 pir:T43945; ribosomal protein S6 modification protein [imported] -; E=3e-13 COG: MJ0620; COG0189 Glutathione synthase/Ribosomal protein S6; E=5e-16 rimK; COG0189 Glutathione synthase/Ribosomal protein S6 modification; E=1e-11 VC2281; COG0189 Glutathione synthase/Ribosomal protein S6; E=3e-11 PFAM: PF02222; ATP-grasp domain; E=7.4e-06; ribosomal protein S6 modification protein 3593075 rimK 1794723 rimK Rhodopirellula baltica SH 1 ribosomal protein S6 modification protein NP_867443.1 3592032 R 243090 CDS NP_867444.1 32474450 1792000 complement(3593021..3594022) 1 NC_005027.1 catalyzes the reversible formation of methenyl-H(4)methanopterin from N(5)-formyl-H(4)methanopterin; N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase 3594022 mch 1792000 mch Rhodopirellula baltica SH 1 N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase NP_867444.1 3593021 R 243090 CDS NP_867445.1 32474451 1796045 3594163..3594759 1 NC_005027.1 PMID: 99209008 best DB hits: BLAST: ddbj:BAB04667.1; (AP001510) bacterioferritin comigratory protein; E=0.003 pir:S74867; hypothetical protein sll1159 - Synechocystis sp. (strain; E=0.010 pir:G81021; thioredoxin, probable NMB1958 [imported] - Neisseria; E=0.029 COG: BH0948; COG1225 Peroxiredoxins; E=3e-04 NMB1958; COG0526 Thiol-disulfide isomerase and thioredoxins; E=0.003 PFAM: PF00578; AhpC/TSA family; E=0.21; peroxiredoxin 3594759 1796045 RB6761 Rhodopirellula baltica SH 1 peroxiredoxin NP_867445.1 3594163 D 243090 CDS NP_867446.1 32474452 1793399 3594756..3595832 1 NC_005027.1 best DB hits: BLAST: pir:T13482; hypothetical protein 34F3.5 - fruit fly (Drosophila; E=0.007 swissprot:P41949; YLK1_CAEEL HYPOTHETICAL 48.2 KD PROTEIN D1044.1; E=0.060 pir:T22412; hypothetical protein F49C12.7 - Caenorhabditis elegans; E=0.18; hypothetical protein 3595832 1793399 RB6763 Rhodopirellula baltica SH 1 hypothetical protein NP_867446.1 3594756 D 243090 CDS NP_867447.1 32474453 1796523 3595880..3597370 1 NC_005027.1 PMID: 8020961 best DB hits: BLAST: gb:AAF30402.1; AF109924_1 (AF109924) sulfatase 1 precursor [Helix; E=1e-39 ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=2e-39 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=3e-39 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=1e-33 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=8e-11 Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=9e-11 PFAM: PF00884; Sulfatase; E=1.9e-44; N-acetylgalactosamine 6-sulfate sulfatase (GALNS) 3597370 1796523 RB6765 Rhodopirellula baltica SH 1 N-acetylgalactosamine 6-sulfate sulfatase (GALNS) NP_867447.1 3595880 D 243090 CDS NP_867448.1 32474454 1797029 3597367..3597534 1 NC_005027.1 hypothetical protein 3597534 1797029 RB6766 Rhodopirellula baltica SH 1 hypothetical protein NP_867448.1 3597367 D 243090 CDS NP_867449.1 32474455 1796132 complement(3597576..3599591) 1 NC_005027.1 PMID: 10192928 PMID: 3029683 best DB hits: BLAST: ddbj:BAB04367.1; (AP001509) ATP-dependent DNA helicase [Bacillus; E=1e-121 swissprot:Q53727; PCRA_STAAU ATP-DEPENDENT DNA HELICASE PCRA; E=1e-115 swissprot:P56255; PCRA_BACST ATP-DEPENDENT DNA HELICASE PCRA; E=1e-114 COG: BH0648; COG0210 Superfamily I DNA and RNA helicases; E=1e-122 PFAM: PF00580; UvrD/REP helicase; E=5.6e-173; ATP-dependent DNA helicase 3599591 pcrA 1796132 pcrA Rhodopirellula baltica SH 1 ATP-dependent DNA helicase NP_867449.1 3597576 R 243090 CDS NP_867450.1 32474456 1796296 complement(3599617..3599862) 1 NC_005027.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 3599862 rpmA 1796296 rpmA Rhodopirellula baltica SH 1 50S ribosomal protein L27 NP_867450.1 3599617 R 243090 CDS NP_867451.1 32474457 1795969 complement(3599921..3600991) 1 NC_005027.1 hypothetical protein 3600991 1795969 RB6771 Rhodopirellula baltica SH 1 hypothetical protein NP_867451.1 3599921 R 243090 CDS NP_867452.1 32474458 1791058 complement(3601004..3602617) 1 NC_005027.1 hypothetical protein 3602617 1791058 RB6774 Rhodopirellula baltica SH 1 hypothetical protein NP_867452.1 3601004 R 243090 CDS NP_867453.1 32474459 1791102 3602594..3602776 1 NC_005027.1 hypothetical protein 3602776 1791102 RB6776 Rhodopirellula baltica SH 1 hypothetical protein NP_867453.1 3602594 D 243090 CDS NP_867454.1 32474460 1795857 3602786..3603199 1 NC_005027.1 hypothetical protein 3603199 1795857 RB6777 Rhodopirellula baltica SH 1 hypothetical protein NP_867454.1 3602786 D 243090 CDS NP_867455.1 32474461 1790870 3603142..3603321 1 NC_005027.1 hypothetical protein 3603321 1790870 RB6778 Rhodopirellula baltica SH 1 hypothetical protein NP_867455.1 3603142 D 243090 CDS NP_867456.1 32474462 1793389 3603381..3605054 1 NC_005027.1 PMID: 7489918 best DB hits: BLAST: ddbj:BAA76622.1; (AB019194) RpoT [Mycobacterium leprae]; E=2e-26 ddbj:BAA76621.1; (AB019193) RpoT [Mycobacterium leprae]; E=2e-26 pir:S61292; transcription initiation factor sigma mysA -; E=4e-26 COG: Rv2703; COG0568 DNA-directed RNA polymerase sigma subunits; E=1e-26 PFAM: PF00140; Sigma-70 factor; E=7.7e-20; sigma-70 factor 3605054 1793389 RB6780 Rhodopirellula baltica SH 1 sigma-70 factor NP_867456.1 3603381 D 243090 CDS NP_867457.1 32474463 1796638 3605138..3606571 1 NC_005027.1 PMID: 9736747 best DB hits: BLAST: pir:E83642; choline sulfatase PA0031 [imported] - Pseudomonas; E=2e-25 gb:AAF72520.1; AF248951_1 (AF248951) mucin-desulfating sulfatase; E=3e-24 swissprot:P31447; YIDJ_ECOLI SULFATASE YIDJ -----; E=3e-24 COG: PA0031; COG3119 Arylsulfatase A and related enzymes; E=2e-26 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=3e-08 ydeN; COG3119 Arylsulfatase A and related enzymes; E=2e-07 PFAM: PF00884; Sulfatase; E=3.3e-13; choline sulfatase 3606571 1796638 RB6781 Rhodopirellula baltica SH 1 choline sulfatase NP_867457.1 3605138 D 243090 CDS NP_867458.1 32474464 1795432 3606608..3606796 1 NC_005027.1 hypothetical protein 3606796 1795432 RB6782 Rhodopirellula baltica SH 1 hypothetical protein NP_867458.1 3606608 D 243090 CDS NP_867459.1 32474465 1794222 complement(3606725..3606901) 1 NC_005027.1 hypothetical protein 3606901 1794222 RB6783 Rhodopirellula baltica SH 1 hypothetical protein NP_867459.1 3606725 R 243090 CDS NP_867460.1 32474466 1797086 3606809..3606922 1 NC_005027.1 hypothetical protein 3606922 1797086 RB6784 Rhodopirellula baltica SH 1 hypothetical protein NP_867460.1 3606809 D 243090 CDS NP_867461.1 32474467 1790262 complement(3607173..3607283) 1 NC_005027.1 hypothetical protein 3607283 1790262 RB6785 Rhodopirellula baltica SH 1 hypothetical protein NP_867461.1 3607173 R 243090 CDS NP_867462.1 32474468 1790600 3607257..3607775 1 NC_005027.1 hypothetical protein 3607775 1790600 RB6786 Rhodopirellula baltica SH 1 hypothetical protein NP_867462.1 3607257 D 243090 CDS NP_867463.1 32474469 1793156 complement(3607369..3607881) 1 NC_005027.1 hypothetical protein 3607881 1793156 RB6787 Rhodopirellula baltica SH 1 hypothetical protein NP_867463.1 3607369 R 243090 CDS NP_867464.1 32474470 1795994 complement(3607945..3608487) 1 NC_005027.1 hypothetical protein 3608487 1795994 RB6789 Rhodopirellula baltica SH 1 hypothetical protein NP_867464.1 3607945 R 243090 CDS NP_867465.1 32474471 1792341 complement(3608420..3608677) 1 NC_005027.1 hypothetical protein 3608677 1792341 RB6790 Rhodopirellula baltica SH 1 hypothetical protein NP_867465.1 3608420 R 243090 CDS NP_867466.1 32474472 1795055 complement(3608668..3608910) 1 NC_005027.1 hypothetical protein 3608910 1795055 RB6791 Rhodopirellula baltica SH 1 hypothetical protein NP_867466.1 3608668 R 243090 CDS NP_867467.1 32474473 1791165 complement(3608757..3608918) 1 NC_005027.1 hypothetical protein 3608918 1791165 RB6792 Rhodopirellula baltica SH 1 hypothetical protein NP_867467.1 3608757 R 243090 CDS NP_867468.1 32474474 1790434 complement(3608962..3610014) 1 NC_005027.1 best DB hits: BLAST: pir:F75057; hypothetical protein PAB2381 - Pyrococcus abyssi (strain; E=2e-13 pir:E71174; hypothetical protein PH0593 - Pyrococcus horikoshii; E=2e-06 pir:F72219; conserved hypothetical protein - Thermotoga maritima; E=1e-04 COG: PAB2381; COG0697 Predicted permeases; E=2e-14 PFAM: PF00892; Integral membrane protein DUF6; E=5.2e-12; permease 3610014 1790434 RB6793 Rhodopirellula baltica SH 1 permease NP_867468.1 3608962 R 243090 CDS NP_867469.1 32474475 1791518 complement(3610027..3611334) 1 NC_005027.1 hypothetical protein 3611334 1791518 RB6795 Rhodopirellula baltica SH 1 hypothetical protein NP_867469.1 3610027 R 243090 CDS NP_867470.1 32474476 1790841 complement(3611421..3613448) 1 NC_005027.1 hypothetical protein 3613448 1790841 RB6796 Rhodopirellula baltica SH 1 hypothetical protein NP_867470.1 3611421 R 243090 CDS NP_867471.1 32474477 1790662 3613537..3614721 1 NC_005027.1 hypothetical protein 3614721 1790662 RB6799 Rhodopirellula baltica SH 1 hypothetical protein NP_867471.1 3613537 D 243090 CDS NP_867472.1 32474478 1797095 3614718..3615578 1 NC_005027.1 PMID: 7751271 best DB hits: BLAST: swissprot:P50199; GNO_GLUOX GLUCONATE 5-DEHYDROGENASE; E=9e-23 swissprot:P39345; IDNO_ECOLI GLUCONATE 5-DEHYDROGENASE; E=4e-22 embl:CAC11881.1; (AL445065) glucose 1-dehydrogenase related; E=3e-21 COG: idnO; COG1028 Dehydrogenases with different specificities (related; E=4e-23 DRA0200; COG1028 Dehydrogenases with different specificities; E=5e-22 BH0938; COG1028 Dehydrogenases with different specificities (related; E=7e-20 PFAM: PF00106; short chain dehydrogenase; E=1e-43; gluconate 5-dehydrogenase 3615578 1797095 RB6802 Rhodopirellula baltica SH 1 gluconate 5-dehydrogenase NP_867472.1 3614718 D 243090 CDS NP_867473.1 32474479 1792173 3615617..3617815 1 NC_005027.1 PMID: 8918804 best DB hits: BLAST: embl:CAA67214.1; (X98625) sialic acid-specific 9-O-acetylesterase; E=5e-31 gb:AAB07813.1; (U40408) sialic-acid O-acetylesterase [Mus; E=9e-31 gb:AAD55976.1; (AF156856) cytosolic sialic acid; E=5e-28; sialic acid-specific 9-O-acetylesterase 3617815 1792173 RB6807 Rhodopirellula baltica SH 1 sialic acid-specific 9-O-acetylesterase NP_867473.1 3615617 D 243090 CDS NP_867474.1 32474480 1792248 complement(3617968..3618576) 1 NC_005027.1 PMID: 8552027 best DB hits: BLAST: swissprot:O86566; GCSH_STRCO PROBABLE GLYCINE CLEAVAGE SYSTEM H; E=1e-15 swissprot:Q50607; GCSH_MYCTU PROBABLE GLYCINE CLEAVAGE SYSTEM H; E=6e-12 swissprot:P25855; GCSH_ARATH GLYCINE CLEAVAGE SYSTEM H PROTEIN 1,; E=7e-12 COG: Rv1826; COG0509 Glycine cleavage system H protein (lipoate-binding); E=6e-13 VNG1605G; COG0509 Glycine cleavage system H protein; E=1e-12 gcvH; COG0509 Glycine cleavage system H protein (lipoate-binding); E=2e-12 PFAM: PF01597; Glycine cleavage H-protein; E=8.4e-12; glycine cleavage system H protein 1 3618576 gcvH 1792248 gcvH Rhodopirellula baltica SH 1 glycine cleavage system H protein 1 NP_867474.1 3617968 R 243090 CDS NP_867475.1 32474481 1795848 complement(3618500..3619450) 1 NC_005027.1 PMID: 9202461 best DB hits: BLAST: ddbj:BAA19714.1; (D88802) H. influenzae hypothetical protein; E=5e-27 swissprot:O05514; THIL_BACSU THIAMINE-MONOPHOSPHATE KINASE; E=5e-27 ddbj:BAB04263.1; (AP001508) thiamin-monophosphate kinase; E=2e-26 COG: BS_ydiA; COG0611 Thiamine monophosphate kinase; E=4e-28 MTH1864; COG2144 Selenophosphate synthetase-related proteins; E=2e-06 AF0733; COG0611 Thiamine monophosphate kinase; E=3e-06 PFAM: PF00586; AIR synthase related protein, N-; E=5e-06 PF02769; AIR synthase related protein, C-; E=6.4e-05; thiamine-monophosphate kinase 3619450 thiL 1795848 thiL Rhodopirellula baltica SH 1 thiamine-monophosphate kinase NP_867475.1 3618500 R 243090 CDS NP_867476.1 32474482 1792454 complement(3619552..3619704) 1 NC_005027.1 hypothetical protein 3619704 1792454 RB6812 Rhodopirellula baltica SH 1 hypothetical protein NP_867476.1 3619552 R 243090 CDS NP_867477.1 32474483 1792530 complement(3619749..3620915) 1 NC_005027.1 PMID: 9634230 best DB hits: BLAST: swissprot:Q10801; DIPZ_MYCTU DIPZ PROTEIN ----- pir: E70923; E=2e-18 embl:CAB58305.1; (AL121854) hypothetical protein SCJ33.06c; E=2e-11 gb:AAF45468.2; (AE002760) CG12547 gene product [Drosophila; E=2e-09 COG: Rv2874_2; COG0526 Thiol-disulfide isomerase and thioredoxins; E=2e-19 Rv2521; COG1225 Peroxiredoxins; E=0.007 DR2242; COG0450 Thiol - alkyl hydroperoxide reductases; E=0.009; DipZ protein, thioredoxin related to cytochrome c 3620915 dipZ 1792530 dipZ Rhodopirellula baltica SH 1 DipZ protein, thioredoxin related to cytochrome c NP_867477.1 3619749 R 243090 CDS NP_867478.1 32474484 1795087 complement(3621016..3621930) 1 NC_005027.1 PMID: 9665876 best DB hits: BLAST: pir:D71379; probable sensory transduction histidine kinase -; E=5e-23 embl:CAB64771.1; (AJ007794) kin1 [Bacillus cereus] -----; E=1e-21 pir:B69863; two-component sensor histidine kinase homolog ykrQ -; E=2e-21 COG: BS_ykrQ_3; COG0642 Sensory transduction histidine kinases; E=2e-22 PFAM: PF00512; His Kinase A (phosphoacceptor) doma; E=6.1e-12 PF02518; Histidine kinase-, DNA gyrase B-, p; E=8.6e-32; sensory transduction histidine kinase 3621930 1795087 RB6818 Rhodopirellula baltica SH 1 sensory transduction histidine kinase NP_867478.1 3621016 R 243090 CDS NP_867479.1 32474485 1791006 3622148..3623422 1 NC_005027.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 3623422 aspC 1791006 aspC Rhodopirellula baltica SH 1 aspartate aminotransferase NP_867479.1 3622148 D 243090 CDS NP_867480.1 32474486 1790738 3623410..3624624 1 NC_005027.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 3624624 aroC 1790738 aroC Rhodopirellula baltica SH 1 chorismate synthase NP_867480.1 3623410 D 243090 CDS NP_867481.1 32474487 1797092 complement(3624680..3626386) 1 NC_005027.1 PMID: 8188604 PMID: 8858155 best DB hits: BLAST: pir:I40872; transcription initiation factor sigma 70 - Chlamydophila; E=2e-74 swissprot:P18333; RPSD_CHLTR RNA POLYMERASE SIGMA FACTOR RPOD; E=3e-74 swissprot:Q9Z7F0; RPSD_CHLPN RNA POLYMERASE SIGMA FACTOR RPOD; E=7e-74 COG: CT615; COG0568 DNA-directed RNA polymerase sigma subunits; E=3e-75 PFAM: PF00140; Sigma-70 factor; E=2.8e-111; transcription initiation factor sigma 70 3626386 1797092 RB6823 Rhodopirellula baltica SH 1 transcription initiation factor sigma 70 NP_867481.1 3624680 R 243090 CDS NP_867482.1 32474488 1795808 complement(3626516..3626659) 1 NC_005027.1 hypothetical protein 3626659 1795808 RB6824 Rhodopirellula baltica SH 1 hypothetical protein NP_867482.1 3626516 R 243090 CDS NP_867483.1 32474489 1794660 3626621..3630106 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:B83021; glutamate-ammonia-ligase adenylyltransferase PA5014; E=1e-45 swissprot:P44419; GLNE_HAEIN GLUTAMATE-AMMONIA-LIGASE; E=7e-44 swissprot:P30870; GLNE_ECOLI GLUTAMATE-AMMONIA-LIGASE; E=7e-43 COG: PA5014; COG1391 Glutamine synthetase adenylyltransferase; E=1e-46; glutamate-ammonia-ligase adenylyltransferase 3630106 glnE 1794660 glnE Rhodopirellula baltica SH 1 glutamate-ammonia-ligase adenylyltransferase NP_867483.1 3626621 D 243090 CDS NP_867484.1 32474490 1795822 complement(3630103..3633003) 1 NC_005027.1 PMID: 9384377 best DB hits: BLAST: pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=3e-35 ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=1e-32 embl:CAA10713.1; (AJ132604) hypothetical protein [Lactococcus; E=3e-32 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=2e-36 PFAM: PF00069; Protein kinase domain; E=1.6e-49 PF00480; ROK family; E=0.13; serine/threonine protein kinase 3633003 1795822 RB6827 Rhodopirellula baltica SH 1 serine/threonine protein kinase NP_867484.1 3630103 R 243090 CDS NP_867485.1 32474491 1794978 3633140..3634153 1 NC_005027.1 PMID: 1522882 best DB hits: BLAST: gb:AAK03896.1; (AE006218) Pbg [Pasteurella multocida]; E=4e-49 swissprot:Q60169; HEM3_PSEAE PORPHOBILINOGEN DEAMINASE (PBG); E=3e-46 pdb:1YPN; Reduced Form Hydroxymethylbilane Synthase (K59q; E=2e-44 COG: PA5260; COG0181 Porphobilinogen deaminase; E=3e-47 PFAM: PF00126; Bacterial regulatory helix-tur; E=0.24 PF01379; Porphobilinogen deaminase; E=1.4e-105; porphobilinogen deaminase 3634153 hemC 1794978 hemC Rhodopirellula baltica SH 1 porphobilinogen deaminase NP_867485.1 3633140 D 243090 CDS NP_867486.1 32474492 1790380 3634211..3635530 1 NC_005027.1 PMID: 7763385 PMID: 1672867 best DB hits: BLAST: pir:E81978; probable glutamate-1-semialdehyde 2,1-aminomutase (EC; E=1e-116 swissprot:Q40147; GSA_LYCES GLUTAMATE-1-SEMIALDEHYDE; E=1e-115 swissprot:Q06741; GSA_XANCH GLUTAMATE-1-SEMIALDEHYDE; E=1e-115 COG: BS_hemL; COG0001 Glutamate-1-semialdehyde aminotransferase; E=1e-116 PFAM: PF00202; Aminotransferase class-III; E=1.8e-125; glutamate-1-semialdehyde 2,1-aminomutase 3635530 hemL 1790380 hemL Rhodopirellula baltica SH 1 glutamate-1-semialdehyde 2,1-aminomutase NP_867486.1 3634211 D 243090 CDS NP_867487.1 32474493 1796270 3635550..3636206 1 NC_005027.1 hypothetical protein 3636206 1796270 RB6833 Rhodopirellula baltica SH 1 hypothetical protein NP_867487.1 3635550 D 243090 CDS NP_867488.1 32474494 1796717 3636563..3636730 1 NC_005027.1 hypothetical protein 3636730 1796717 RB6838 Rhodopirellula baltica SH 1 hypothetical protein NP_867488.1 3636563 D 243090 CDS NP_867489.1 32474495 1790976 complement(3636888..3637106) 1 NC_005027.1 hypothetical protein 3637106 1790976 RB6839 Rhodopirellula baltica SH 1 hypothetical protein NP_867489.1 3636888 R 243090 CDS NP_867490.1 32474496 1797011 3637141..3637938 1 NC_005027.1 PMID: 2555671 best DB hits: BLAST: pir:S66080; UDP-N-acetylglucosamine pyrophosphorylase gcaD -; E=1e-44 gb:AAK05981.1; AE006418_1 (AE006418) UDP-N-acetylglucosamine; E=1e-43 ddbj:BAB03784.1; (AP001507) UDP-N-acetylglucosamine; E=2e-43 COG: BS_gcaD; COG1207 N-acetylglucosamine-1-phosphate uridyltransferase; E=1e-45 MTH1589; COG1208 Nucleoside-diphosphate-sugar pyrophosphorylases; E=1e-10 PFAM: PF01128; Uncharacterized protein famil; E=2.4e-06 PF00483; Nucleotidyl transferase; E=1.7e-08; UDP-N-acetylglucosamine pyrophosphorylase 3637938 glmU 1797011 glmU Rhodopirellula baltica SH 1 UDP-N-acetylglucosamine pyrophosphorylase NP_867490.1 3637141 D 243090 CDS NP_867491.1 32474497 1791957 3637931..3638881 1 NC_005027.1 PMID: 8918235 best DB hits: BLAST: pir:S71262; ribose-phosphate pyrophosphokinase (EC 2.7.6.1) II -; E=2e-82 swissprot:Q42583; KPR2_ARATH RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 2; E=2e-82 embl:CAB43599.1; (AJ006940) phosphoribosyl pyrophosphate synthase; E=3e-82 COG: Cj0918c; COG0462 Phosphoribosylpyrophosphate synthetase; E=6e-78 PFAM: PF00156; Phosphoribosyl transferase domai; E=2.1e-25; ribose-phosphate pyrophosphokinase 3638881 prsA 1791957 prsA Rhodopirellula baltica SH 1 ribose-phosphate pyrophosphokinase NP_867491.1 3637931 D 243090 CDS NP_867492.1 32474498 1792348 complement(3638904..3640397) 1 NC_005027.1 PMID: 10464185 best DB hits: BLAST: gb:AAC33460.2; (AF067140) exopolysaccharide polymerization; E=1e-06 ddbj:BAB07387.1; (AP001519) capsular polysaccharide biosynthesis; E=1e-06 embl:CAC06097.1; (AJ010494) ParA protein [Listeria monocytogenes]; E=3e-06 COG: BH3668; COG0489 ATPases involved in chromosome partitioning; E=1e-07 BH3027; COG2894 Septum formation inhibitor-activating ATPase; E=2e-06 BS_ywqD; COG0489 ATPases involved in chromosome partitioning; E=2e-06 PFAM: PF00991; ParA family ATPase; E=0.49; exopolysaccharide polymerization protein 3640397 1792348 RB6845 Rhodopirellula baltica SH 1 exopolysaccharide polymerization protein NP_867492.1 3638904 R 243090 CDS NP_867493.1 32474499 1790415 complement(3640411..3642033) 1 NC_005027.1 PMID: 11842247; hypothetical protein 3642033 1790415 RB6847 Rhodopirellula baltica SH 1 hypothetical protein NP_867493.1 3640411 R 243090 CDS NP_867494.1 32474500 1791839 3642216..3642443 1 NC_005027.1 hypothetical protein 3642443 1791839 RB6848 Rhodopirellula baltica SH 1 hypothetical protein NP_867494.1 3642216 D 243090 CDS NP_867495.1 32474501 1794766 complement(3642232..3642537) 1 NC_005027.1 hypothetical protein 3642537 1794766 RB6849 Rhodopirellula baltica SH 1 hypothetical protein NP_867495.1 3642232 R 243090 CDS NP_867496.1 32474502 1793095 complement(3642555..3643991) 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038 PF01856; Outer membrane protein; E=0.79; hypothetical protein 3643991 1793095 RB6850 Rhodopirellula baltica SH 1 hypothetical protein NP_867496.1 3642555 R 243090 CDS NP_867497.1 32474503 1794397 complement(3644007..3644126) 1 NC_005027.1 hypothetical protein 3644126 1794397 RB6851 Rhodopirellula baltica SH 1 hypothetical protein NP_867497.1 3644007 R 243090 CDS NP_867498.1 32474504 1789979 complement(3644168..3645400) 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 3645400 1789979 RB6852 Rhodopirellula baltica SH 1 signal peptide NP_867498.1 3644168 R 243090 CDS NP_867499.1 32474505 1793632 complement(3645425..3645613) 1 NC_005027.1 hypothetical protein 3645613 1793632 RB6856 Rhodopirellula baltica SH 1 hypothetical protein NP_867499.1 3645425 R 243090 CDS NP_867500.1 32474506 1794571 complement(3645782..3646807) 1 NC_005027.1 PMID: 8759848 best DB hits: BLAST: swissprot:Q54728; YJHC_STRPN HYPOTHETICAL PROTEIN IN NANB 3'REGION; E=1e-04 pir:A83617; probable oxidoreductase PA0237 [imported] - Pseudomonas; E=0.033 pir:S56505; hypothetical 41.9K protein (leuX-fecE intergenic region); E=0.094 COG: PA0237; COG0673 Predicted dehydrogenases and related proteins; E=0.003 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=2.6e-05; oxidoreductase 3646807 1794571 RB6858 Rhodopirellula baltica SH 1 oxidoreductase NP_867500.1 3645782 R 243090 CDS NP_867501.1 32474507 1790320 complement(3646874..3648253) 1 NC_005027.1 PMID: 10192928 best DB hits: BLAST: embl:CAC24034.1; (AL512980) ORF-c34_017 [Sulfolobus solfataricus]; E=2e-10 ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=2e-10 gb:AAD51832.1; AF175299_7 (AF175299) ThuB [Sinorhizobium meliloti]; E=4e-10 COG: BH1248; COG0673 Predicted dehydrogenases and related proteins; E=2e-11 PFAM: PF01408; Oxidoreductase, NAD-bin; E=1.4e-20; NADH-dependent dehydrogenase 3648253 1790320 RB6860 Rhodopirellula baltica SH 1 NADH-dependent dehydrogenase NP_867501.1 3646874 R 243090 CDS NP_867502.1 32474508 1791722 complement(3648286..3648444) 1 NC_005027.1 hypothetical protein 3648444 1791722 RB6863 Rhodopirellula baltica SH 1 hypothetical protein NP_867502.1 3648286 R 243090 CDS NP_867503.1 32474509 1791112 3648295..3648429 1 NC_005027.1 hypothetical protein 3648429 1791112 RB6864 Rhodopirellula baltica SH 1 hypothetical protein NP_867503.1 3648295 D 243090 CDS NP_867504.1 32474510 1793910 3648392..3649453 1 NC_005027.1 hypothetical protein 3649453 1793910 RB6865 Rhodopirellula baltica SH 1 hypothetical protein NP_867504.1 3648392 D 243090 CDS NP_867505.1 32474511 1796104 complement(3649470..3651020) 1 NC_005027.1 hypothetical protein 3651020 1796104 RB6866 Rhodopirellula baltica SH 1 hypothetical protein NP_867505.1 3649470 R 243090 CDS NP_867506.1 32474512 1796114 complement(3650927..3652456) 1 NC_005027.1 hypothetical protein 3652456 1796114 RB6867 Rhodopirellula baltica SH 1 hypothetical protein NP_867506.1 3650927 R 243090 CDS NP_867507.1 32474513 1796912 3652446..3652676 1 NC_005027.1 hypothetical protein 3652676 1796912 RB6870 Rhodopirellula baltica SH 1 hypothetical protein NP_867507.1 3652446 D 243090 CDS NP_867508.1 32474514 1793791 complement(3652782..3654230) 1 NC_005027.1 PMID: 7910580 best DB hits: BLAST: embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=8e-29 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=8e-29 swissprot:P50428; ARSA_MOUSE ARYLSULFATASE A PRECURSOR (ASA); E=1e-27 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=2e-27 BS_yfnI; COG1368 Phosphoglycerol transferase and related proteins,; E=0.004 PFAM: PF00884; Sulfatase; E=2e-60; arylsulphatase A 3654230 1793791 RB6873 Rhodopirellula baltica SH 1 arylsulphatase A NP_867508.1 3652782 R 243090 CDS NP_867509.1 32474515 1792615 3654471..3655649 1 NC_005027.1 PMID: 8098033 best DB hits: BLAST: swissprot:P29679; TESA_ECOLI ACYL-COA THIOESTERASE I PRECURSOR; E=0.32 gb:AAB40248.1; (U82664) acyl-coA thioesterase I precursor; E=0.32 gb:AAG54851.1; AE005230_11 (AE005230) acyl-CoA thioesterase I; E=0.32 PFAM: PF01236; Sodium:galactoside symporter; E=0.17; acyl-CoA thioesterase 3655649 1792615 RB6876 Rhodopirellula baltica SH 1 acyl-CoA thioesterase NP_867509.1 3654471 D 243090 CDS NP_867510.1 32474516 1793335 complement(3655896..3656162) 1 NC_005027.1 hypothetical protein 3656162 1793335 RB6880 Rhodopirellula baltica SH 1 hypothetical protein NP_867510.1 3655896 R 243090 CDS NP_867511.1 32474517 1790951 3656194..3657792 1 NC_005027.1 PMID: 10783239 best DB hits: BLAST: pir:E71676; hypothetical protein RP699 - Rickettsia prowazekii; E=2e-19 pir:C83271; conserved hypothetical protein PA2986 [imported] -; E=1e-17 pir:E83271; conserved hypothetical protein PA2988 [imported] -; E=4e-16 COG: RP699; COG0577 Predicted permease; E=2e-20 PFAM: PF02687; Predicted permease; E=3.5e-39; lipoprotein releasing system transmembrane protein LolC 3657792 lolC 1790951 lolC Rhodopirellula baltica SH 1 lipoprotein releasing system transmembrane protein LolC NP_867511.1 3656194 D 243090 CDS NP_867512.1 32474518 1796214 3657855..3658622 1 NC_005027.1 PMID: 10783239 best DB hits: BLAST: gb:AAG34709.1; AF320001_2 (AF320001) ATP binding protein; E=5e-49 swissprot:P45247; LOLD_HAEIN LIPOPROTEIN RELEASING SYSTEM; E=3e-45 gb:AAG18646.1; (AE004970) amino acid ABC transporter, ATP-binding; E=3e-45 COG: HI1549; COG1136 ABC-type (unclassified) transport system, ATPase; E=3e-46 PFAM: PF00005; ABC transporter; E=3.4e-58; lipoprotein releasing system ATP-binding protein LolD 3658622 lolD 1796214 lolD Rhodopirellula baltica SH 1 lipoprotein releasing system ATP-binding protein LolD NP_867512.1 3657855 D 243090 CDS NP_867513.1 32474519 1794711 3658683..3658841 1 NC_005027.1 hypothetical protein 3658841 1794711 RB6884 Rhodopirellula baltica SH 1 hypothetical protein NP_867513.1 3658683 D 243090 CDS NP_867514.1 32474520 1790822 complement(3658845..3661157) 1 NC_005027.1 PMID: 8063110 best DB hits: BLAST: swissprot:Q57142; C554_NITEU CYTOCHROME C-554 PRECURSOR (C554); E=1e-05 pdb:1FT5; A Chain A, Crystal Structure Of The Oxidized State Of; E=1e-05; cytochrome c-554 3661157 1790822 RB6885 Rhodopirellula baltica SH 1 cytochrome c-554 NP_867514.1 3658845 R 243090 CDS NP_867515.1 32474521 1790165 complement(3661187..3662449) 1 NC_005027.1 hypothetical protein 3662449 1790165 RB6888 Rhodopirellula baltica SH 1 hypothetical protein NP_867515.1 3661187 R 243090 CDS NP_867516.1 32474522 1790271 complement(3662541..3665156) 1 NC_005027.1 PMID: 10681551 best DB hits: BLAST: embl:CAB76379.1; (Y13219) hemocyanin type 1 [Haliotis; E=0.20 embl:CAC20588.1; (AJ252741) hemocyanin [Haliotis tuberculata]; E=0.20; hemocyanin type 1 3665156 1790271 RB6891 Rhodopirellula baltica SH 1 hemocyanin type 1 NP_867516.1 3662541 R 243090 CDS NP_867517.1 32474523 1792877 complement(3665153..3666358) 1 NC_005027.1 PMID: 1379743 best DB hits: BLAST: pir:S74927; lipophilic protein lim - Synechocystis sp. (strain PCC; E=3e-20 pir:B69721; teichoic acid linkage unit synthesis tagO - Bacillus; E=8e-19 pir:A55856; llm protein - Staphylococcus aureus ----- ddbj:; E=3e-18 COG: sll0648; COG0472 UDP-N-acetylmuramyl pentapeptide; E=2e-21 PFAM: PF00953; Glycosyl transferase; E=1.3e-27; undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase 3666358 rfe 1792877 rfe Rhodopirellula baltica SH 1 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase NP_867517.1 3665153 R 243090 CDS NP_867518.1 32474524 1795248 complement(3666374..3666835) 1 NC_005027.1 hypothetical protein 3666835 1795248 RB6898 Rhodopirellula baltica SH 1 hypothetical protein NP_867518.1 3666374 R 243090 CDS NP_867519.1 32474525 1794005 3666617..3669100 1 NC_005027.1 hypothetical protein 3669100 1794005 RB6901 Rhodopirellula baltica SH 1 hypothetical protein NP_867519.1 3666617 D 243090 CDS NP_867520.1 32474526 1793888 complement(3669059..3669220) 1 NC_005027.1 hypothetical protein 3669220 1793888 RB6903 Rhodopirellula baltica SH 1 hypothetical protein NP_867520.1 3669059 R 243090 CDS NP_867521.1 32474527 1791856 3669200..3670501 1 NC_005027.1 hypothetical protein 3670501 1791856 RB6904 Rhodopirellula baltica SH 1 hypothetical protein NP_867521.1 3669200 D 243090 CDS NP_867522.1 32474528 1790512 complement(3670529..3670783) 1 NC_005027.1 hypothetical protein 3670783 1790512 RB6905 Rhodopirellula baltica SH 1 hypothetical protein NP_867522.1 3670529 R 243090 CDS NP_867523.1 32474529 1790649 complement(3670719..3670961) 1 NC_005027.1 hypothetical protein 3670961 1790649 RB6906 Rhodopirellula baltica SH 1 hypothetical protein NP_867523.1 3670719 R 243090 CDS NP_867524.1 32474530 1793714 3670884..3671042 1 NC_005027.1 hypothetical protein 3671042 1793714 RB6907 Rhodopirellula baltica SH 1 hypothetical protein NP_867524.1 3670884 D 243090 CDS NP_867525.1 32474531 1797048 complement(3671057..3671329) 1 NC_005027.1 hypothetical protein 3671329 1797048 RB6908 Rhodopirellula baltica SH 1 hypothetical protein NP_867525.1 3671057 R 243090 CDS NP_867526.1 32474532 1794913 3671248..3671514 1 NC_005027.1 hypothetical protein 3671514 1794913 RB6909 Rhodopirellula baltica SH 1 hypothetical protein NP_867526.1 3671248 D 243090 CDS NP_867527.1 32474533 1791097 complement(3671356..3671484) 1 NC_005027.1 hypothetical protein 3671484 1791097 RB6910 Rhodopirellula baltica SH 1 hypothetical protein NP_867527.1 3671356 R 243090 CDS NP_867528.1 32474534 1790069 3671445..3672737 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 3672737 1790069 RB6911 Rhodopirellula baltica SH 1 signal peptide NP_867528.1 3671445 D 243090 CDS NP_867529.1 32474535 1796129 3672793..3672960 1 NC_005027.1 signal peptide 3672960 1796129 RB6912 Rhodopirellula baltica SH 1 signal peptide NP_867529.1 3672793 D 243090 CDS NP_867530.1 32474536 1790713 3673034..3676120 1 NC_005027.1 best DB hits: BLAST: embl:CAB98267.1; (AJ276171) ASPIC [Homo sapiens]; E=1e-07 embl:CAB98268.1; (AJ276171) ASPIC [Homo sapiens] ----- embl:; E=1e-07 embl:CAB98269.1; (AJ276171) ASPIC [Homo sapiens]; E=1e-07 COG: aq_854; COG0457 TPR-repeat-containing proteins; E=0.004 PFAM: PF01839; FG-GAP repeat; E=0.037; acid secreted protein ASPIC 3676120 1790713 RB6914 Rhodopirellula baltica SH 1 acid secreted protein ASPIC NP_867530.1 3673034 D 243090 CDS NP_867531.1 32474537 1795062 3676188..3676391 1 NC_005027.1 hypothetical protein 3676391 1795062 RB6916 Rhodopirellula baltica SH 1 hypothetical protein NP_867531.1 3676188 D 243090 CDS NP_867532.1 32474538 1796286 complement(3676346..3676531) 1 NC_005027.1 hypothetical protein 3676531 1796286 RB6917 Rhodopirellula baltica SH 1 hypothetical protein NP_867532.1 3676346 R 243090 CDS NP_867533.1 32474539 1796315 3676537..3676791 1 NC_005027.1 hypothetical protein 3676791 1796315 RB6918 Rhodopirellula baltica SH 1 hypothetical protein NP_867533.1 3676537 D 243090 CDS NP_867534.1 32474540 1793633 3676847..3677914 1 NC_005027.1 PMID: 8594326 best DB hits: BLAST: pir:S57418; fimbrial protein MS11-N556 precursor - Neisseria; E=0.009 ddbj:BAB06546.1; (AP001516) exogenous DNA-binding protein; E=0.014 gb:AAD05177.1; (AF110185) general secretory pathway protein G; E=0.014 COG: DR0548; COG2165 General secretory pathway proteins G and H and; E=0.010 PFAM: PF00114; Pilin (bacterial filament); E=0.16; fimbrial protein 3677914 1793633 RB6920 Rhodopirellula baltica SH 1 fimbrial protein NP_867534.1 3676847 D 243090 CDS NP_867535.1 32474541 1791602 3677883..3678398 1 NC_005027.1 best DB hits: PFAM: PF02369; Bacterial Ig-like domain (group 1); E=0.83; hypothetical protein 3678398 1791602 RB6923 Rhodopirellula baltica SH 1 hypothetical protein NP_867535.1 3677883 D 243090 CDS NP_867536.1 32474542 1791084 complement(3677976..3678461) 1 NC_005027.1 hypothetical protein 3678461 1791084 RB6925 Rhodopirellula baltica SH 1 hypothetical protein NP_867536.1 3677976 R 243090 CDS NP_867537.1 32474543 1795438 3678479..3678961 1 NC_005027.1 hypothetical protein 3678961 1795438 RB6928 Rhodopirellula baltica SH 1 hypothetical protein NP_867537.1 3678479 D 243090 CDS NP_867538.1 32474544 1792980 complement(3679076..3680317) 1 NC_005027.1 PMID: 7551585 best DB hits: BLAST: swissprot:O04937; DHEA_NICPL GLUTAMATE DEHYDROGENASE A (GDH A); E=1e-115 swissprot:Q43314; DHE1_ARATH GLUTAMATE DEHYDROGENASE 1 (GDH 1); E=1e-115 pir:T04342; glutamate dehydrogenase (EC 1.4.1.2) - maize -----; E=1e-114 COG: TM1015; COG0334 Glutamate dehydrogenase/leucine dehydrogenase; E=1e-99 PFAM: PF02812; Glu/Leu/Phe/Val dehydrogenase; E=3.1e-56 PF00044; Glyceraldehyde 3-phosphate de; E=0.76 PF02254; KTN NAD-binding domain; E=0.33; glutamate dehydrogenase A 3680317 gdhA 1792980 gdhA Rhodopirellula baltica SH 1 glutamate dehydrogenase A NP_867538.1 3679076 R 243090 CDS NP_867539.1 32474545 1790390 complement(3680349..3681308) 1 NC_005027.1 PMID: 10930739 best DB hits: BLAST: gb:AAG01804.1; AF276772_3 (AF276772) O-acetylserine sulfhydrylase; E=3e-83 swissprot:P95230; CYSK_MYCTU CYSTEINE SYNTHASE A (O-ACETYLSERINE; E=1e-82 pir:H81161; probable cysteine synthase (EC 4.2.99.8) NMA0974; E=1e-81 COG: Rv2334; COG0031 Cysteine synthase; E=1e-83 PFAM: PF00291; Pyridoxal-phosphate dependent enzym; E=1.3e-119; cysteine synthase (O-acetylserine sulfhydrylase) 3681308 cysK 1790390 cysK Rhodopirellula baltica SH 1 cysteine synthase (O-acetylserine sulfhydrylase) NP_867539.1 3680349 R 243090 CDS NP_867540.1 32474546 1792837 complement(3681290..3682351) 1 NC_005027.1 catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta 3682351 korB 1792837 korB Rhodopirellula baltica SH 1 2-oxoglutarate ferredoxin oxidoreductase subunit beta NP_867540.1 3681290 R 243090 CDS NP_867541.1 32474547 1795158 complement(3682377..3684260) 1 NC_005027.1 PMID: 11401501 best DB hits: BLAST: embl:CAC08296.1; (AL392148) oxidoreductase [Streptomyces; E=1e-165 embl:CAB60189.1; (AL132824) oxidoreductase alpha-subunit; E=1e-164 pir:F70864; probable oxidoreductase alpha subunit - Mycobacterium; E=1e-160 COG: Rv2455c_2; COG0674 Pyruvate:ferredoxin oxidoreductase and related; E=1e-106 Rv2455c_1; COG1014 Pyruvate:ferredoxin oxidoreductase and related; E=2e-46 BH2374_2; COG0674 Pyruvate:ferredoxin oxidoreductase and related; E=2e-40 PFAM: PF01855; Pyruvate flavodoxin/ferredoxin oxido; E=8.6e-64; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha 3684260 korA 1795158 korA Rhodopirellula baltica SH 1 2-oxoglutarate ferredoxin oxidoreductase subunit alpha NP_867541.1 3682377 R 243090 CDS NP_867542.1 32474548 1795161 3684322..3684504 1 NC_005027.1 hypothetical protein 3684504 1795161 RB6937 Rhodopirellula baltica SH 1 hypothetical protein NP_867542.1 3684322 D 243090 CDS NP_867543.1 32474549 1795098 complement(3684477..3685985) 1 NC_005027.1 hypothetical protein 3685985 1795098 RB6938 Rhodopirellula baltica SH 1 hypothetical protein NP_867543.1 3684477 R 243090 CDS NP_867544.1 32474550 1793831 complement(3686076..3686675) 1 NC_005027.1 hypothetical protein 3686675 1793831 RB6941 Rhodopirellula baltica SH 1 hypothetical protein NP_867544.1 3686076 R 243090 CDS NP_867545.1 32474551 1790655 3686749..3688518 1 NC_005027.1 PMID: 9523018 best DB hits: BLAST: pir:C71320; probable adenylate cyclase - syphilis spirochete -----; E=8e-40 pir:F70563; probable transmembrane protein - Mycobacterium; E=2e-35 embl:CAA18817.1; (AL023093) membrane protein; E=4e-35 COG: TP0485; COG2114 Adenylate cyclase, family 3 (some proteins contain; E=8e-41 slr1991_2; COG2114 Adenylate cyclase, family 3 (some proteins; E=9e-14 PA3217; COG2114 Adenylate cyclase, family 3 (some proteins contain; E=4e-12 PFAM: PF00672; HAMP domain; E=8.7e-11 PF00211; Adenylate and Guanylate cyclase; E=7e-26; adenylate cyclase 3688518 cyaA 1790655 cyaA Rhodopirellula baltica SH 1 adenylate cyclase NP_867545.1 3686749 D 243090 CDS NP_867546.1 32474552 1795574 3688572..3689660 1 NC_005027.1 PMID: 11953381; hypothetical protein 3689660 1795574 RB6949 Rhodopirellula baltica SH 1 hypothetical protein NP_867546.1 3688572 D 243090 CDS NP_867547.1 32474553 1794802 complement(3689634..3690014) 1 NC_005027.1 PMID: 8071224 best DB hits: BLAST: ddbj:BAB05083.1; (AP001511) diacylglycerol kinase [Bacillus; E=3e-05 gb:AAA70044.1; (U29177) diacylglycerol kinase [Bacillus subtilis]; E=9e-05 swissprot:P19638; KDGL_BACSU DIACYLGLYCEROL KINASE (DAGK); E=2e-04 COG: BH1364; COG0818 Diacylglycerol kinase; E=3e-06 PFAM: PF01219; Prokaryotic diacylglycerol kinase; E=1.1e-19; diacylglycerol kinase 3690014 dgkA 1794802 dgkA Rhodopirellula baltica SH 1 diacylglycerol kinase NP_867547.1 3689634 R 243090 CDS NP_867548.1 32474554 1795666 complement(3690015..3693377) 1 NC_005027.1 hypothetical protein 3693377 1795666 RB6951 Rhodopirellula baltica SH 1 hypothetical protein NP_867548.1 3690015 R 243090 CDS NP_867549.1 32474555 1792182 3693603..3695060 1 NC_005027.1 PMID: 7910580 best DB hits: BLAST: embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=1e-46 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=1e-46 pdb:1E2S; P Chain P, Crystal Structure Of An Arylsulfatase A; E=1e-45 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=4e-32 BS_yvgJ; COG1368 Phosphoglycerol transferase and related proteins,; E=0.006 PFAM: PF00884; Sulfatase; E=1.5e-63; arylsulphatase A 3695060 1792182 RB6956 Rhodopirellula baltica SH 1 arylsulphatase A NP_867549.1 3693603 D 243090 CDS NP_867550.1 32474556 1790598 complement(3695186..3695752) 1 NC_005027.1 PMID: 11016950 best DB hits: BLAST: gb:AAG19686.1; (AE005056) Vng1353c [Halobacterium sp. NRC-1]; E=0.009 gb:AAG19687.1; (AE005056) Vng1355h [Halobacterium sp. NRC-1]; E=0.034 ddbj:BAB05440.1; (AP001512) BH1721~unknown conserved protein; E=0.049 COG: VNG1355H; COG3402 Uncharacterized protein; E=0.003; hypothetical protein 3695752 1790598 RB6958 Rhodopirellula baltica SH 1 hypothetical protein NP_867550.1 3695186 R 243090 CDS NP_867551.1 32474557 1793313 complement(3695880..3696980) 1 NC_005027.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 3696980 ruvB 1793313 ruvB Rhodopirellula baltica SH 1 Holliday junction DNA helicase RuvB NP_867551.1 3695880 R 243090 CDS NP_867552.1 32474558 1792027 3696994..3697689 1 NC_005027.1 PMID: 7889934 best DB hits: BLAST: swissprot:O05843; RPOE_MYCTU RNA POLYMERASE SIGMA-E FACTOR; E=6e-07 gb:AAD41810.1; AF144091_4 (AF144091) sigma factor SigH; E=5e-06 pir:T42015; probable RNA polymerase sigma factor - Streptomyces; E=1e-05 COG: Rv3223c; COG1595 DNA-directed RNA polymerase specialized sigma; E=5e-08 PFAM: PF00140; Sigma-70 factor; E=0.012; RNA polymerase sigma-E factor 3697689 1792027 RB6961 Rhodopirellula baltica SH 1 RNA polymerase sigma-E factor NP_867552.1 3696994 D 243090 CDS NP_867553.1 32474559 1794604 3697682..3698575 1 NC_005027.1 best DB hits: BLAST: pir:T36872; hypothetical protein SCI51.09c - Streptomyces coelicolor; E=4e-08 swissprot:P35155; YPUH_BACSU HYPOTHETICAL 22.0 KD PROTEIN IN; E=3e-07 pir:D71320; conserved hypothetical protein TP0458 - syphilis; E=5e-06 COG: BS_ypuH; COG1386 Predicted transcriptional regulator containing the; E=2e-08; transcriptional regulator 3698575 1794604 RB6962 Rhodopirellula baltica SH 1 transcriptional regulator NP_867553.1 3697682 D 243090 CDS NP_867554.1 32474560 1796015 complement(3698510..3699649) 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: pir:G72218; conserved hypothetical protein - Thermotoga maritima; E=5e-45 pir:T02275; hypothetical protein T13D8.12 - Arabidopsis thaliana; E=3e-44 pir:H70337; conserved hypothetical protein aq_416 - Aquifex aeolicus; E=3e-43 COG: TM1715; COG0820 Predicted Fe-S oxidoreductase; E=4e-46; Fe-S oxidoreductase 3699649 1796015 RB6963 Rhodopirellula baltica SH 1 Fe-S oxidoreductase NP_867554.1 3698510 R 243090 CDS NP_867555.1 32474561 1796183 3699799..3703368 1 NC_005027.1 PMID: 7574579 best DB hits: BLAST: swissprot:Q44091; SNDH_ACELI L-SORBOSONE DEHYDROGENASE (SNDH); E=0.001 PFAM: PF00034; Cytochrome c; E=0.11; L-sorbosone dehydrogenase 3703368 1796183 RB6964 Rhodopirellula baltica SH 1 L-sorbosone dehydrogenase NP_867555.1 3699799 D 243090 CDS NP_867556.1 32474562 1792588 3703322..3705316 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:F83313; conserved hypothetical protein PA2651 [imported] -; E=7e-13 pir:C82300; conserved hypothetical protein VC0624 [imported] -; E=1e-12 swissprot:O83564; Y553_TREPA HYPOTHETICAL PROTEIN TP0553 -----; E=1e-09 COG: PA2651; COG0628 Predicted permease; E=7e-14 PFAM: PF01594; Domain of unknown function DU; E=1.1e-06 PF00694; Aconitase C-terminal domain; E=0.81 PF01594; Domain of unknown function DU; E=2.4e-27; permease 3705316 1792588 RB6967 Rhodopirellula baltica SH 1 permease NP_867556.1 3703322 D 243090 CDS NP_867557.1 32474563 1792108 3705375..3707036 1 NC_005027.1 PMID: 8813677 best DB hits: BLAST: pir:T30841; serine-repeat antigen 4 - Plasmodium vivax ----- gb:; E=0.030 swissprot:Q06852; SLP1_CLOTM CELL SURFACE GLYCOPROTEIN 1 PRECURSOR; E=0.37; serine repeat-containing antigen 3707036 1792108 RB6968 Rhodopirellula baltica SH 1 serine repeat-containing antigen NP_867557.1 3705375 D 243090 CDS NP_867558.1 32474564 1792834 complement(3707053..3708402) 1 NC_005027.1 PMID: 12024217 best DB hits: PFAM: PF01319; Cholesterol oxidase; E=0.56 PF00884; Sulfatase; E=0.052; hypothetical protein 3708402 1792834 RB6969 Rhodopirellula baltica SH 1 hypothetical protein NP_867558.1 3707053 R 243090 CDS NP_867559.1 32474565 1790250 complement(3708439..3710583) 1 NC_005027.1 hypothetical protein 3710583 1790250 RB6971 Rhodopirellula baltica SH 1 hypothetical protein NP_867559.1 3708439 R 243090 CDS NP_867560.1 32474566 1795146 3710584..3711420 1 NC_005027.1 PMID: 10339832 PMID: 2060788 best DB hits: BLAST: ddbj:BAB05779.1; (AP001514) BH2060~unknown [Bacillus halodurans]; E=5e-05 gb:AAD31610.1; (AF079807) tellurite resistance protein TehB; E=1e-04 swissprot:P45134; TEHB_HAEIN TELLURITE RESISTANCE PROTEIN TEHB; E=2e-04 COG: HI1275; COG0500 SAM-dependent methyltransferases; E=2e-05 VNG1117C; COG2520 Predicted methyltransferase; E=0.001 NMB1617; COG0500 SAM-dependent methyltransferases; E=0.002; tellurite resistance protein TehB 3711420 tehB 1795146 tehB Rhodopirellula baltica SH 1 tellurite resistance protein TehB NP_867560.1 3710584 D 243090 CDS NP_867561.1 32474567 1792184 3711550..3713001 1 NC_005027.1 PMID: 9603950 best DB hits: BLAST: gb:AAB31210.2; (S73498) AgX-1 antigen [Homo sapiens]; E=9e-64 swissprot:Q16222; UAP1_HUMAN UDP-N-ACETYLHEXOSAMINE; E=9e-64 gb:AAF52387.1; (AE003613) BcDNA:LD24639 gene product [Drosophila; E=1e-63 PFAM: PF01128; Uncharacterized protein family UPF00; E=0.091 PF01704; UTP--glucose-1-phosphate uridylyltra; E=3.5e-37; UDP-N-acetylhexosamine pyrophosphorylase 3713001 1792184 RB6977 Rhodopirellula baltica SH 1 UDP-N-acetylhexosamine pyrophosphorylase NP_867561.1 3711550 D 243090 CDS NP_867562.1 32474568 1795415 3712827..3715022 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:A83071; hypothetical protein PA4591 [imported] - Pseudomonas; E=2e-04 pir:S77541; hypothetical protein slr1207 - Synechocystis sp. (strain; E=4e-04 pir:D70391; hypothetical protein aq_1060 - Aquifex aeolicus -----; E=0.003 COG: PA4591; COG0845 Membrane-fusion protein; E=2e-05 aq_1060; COG1566 Multidrug resistance efflux pump; E=3e-04 PA3402; COG0845 Membrane-fusion protein; E=8e-04 PFAM: PF00358; phosphoenolpyruvate-dependent sug; E=0.72; hypothetical protein 3715022 1795415 RB6978 Rhodopirellula baltica SH 1 hypothetical protein NP_867562.1 3712827 D 243090 CDS NP_867563.1 32474569 1792061 3715019..3715879 1 NC_005027.1 PMID: 10952301 best DB hits: BLAST: swissprot:Q9WYI7; Y352_THEMA HYPOTHETICAL ABC TRANSPORTER; E=4e-61 pir:A82184; ABC transporter ATP-binding protein VC1568 [imported] -; E=4e-59 ddbj:BAB07392.1; (AP001519) ABC transporter (ATP-binding protein); E=2e-57 COG: TM0352; COG1136 ABC-type (unclassified) transport system, ATPase; E=4e-62 PFAM: PF00485; Phosphoribulokinase / Uridine; E=0.53 PF00005; ABC transporter; E=3.1e-55; ABC transporter ATP-binding protein 3715879 1792061 RB6982 Rhodopirellula baltica SH 1 ABC transporter ATP-binding protein NP_867563.1 3715019 D 243090 CDS NP_867564.1 32474570 1792084 3715876..3717207 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:S76946; hypothetical protein - Synechocystis sp. (strain PCC; E=2e-34 swissprot:O31712; YKNZ_BACSU HYPOTHETICAL 42.1 KDA PROTEIN IN; E=9e-33 pir:G72385; conserved hypothetical protein - Thermotoga maritima; E=4e-30 COG: slr0594; COG0577 Predicted permease; E=2e-35 PFAM: PF02780; Transketolase, C-terminal dom; E=0.67 PF02687; Predicted permease; E=1.8e-34; ATP-binding/permease fusion ABC transporter 3717207 1792084 RB6983 Rhodopirellula baltica SH 1 ATP-binding/permease fusion ABC transporter NP_867564.1 3715876 D 243090 CDS NP_867565.1 32474571 1797052 3717257..3717394 1 NC_005027.1 hypothetical protein 3717394 1797052 RB6984 Rhodopirellula baltica SH 1 hypothetical protein NP_867565.1 3717257 D 243090 CDS NP_867566.1 32474572 1790293 3717360..3718910 1 NC_005027.1 PMID: 10192928 best DB hits: BLAST: ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=1e-07 embl:CAC24034.1; (AL512980) ORF-c34_017 [Sulfolobus solfataricus]; E=2e-07 swissprot:P40332; YISS_BACSU HYPOTHETICAL 37.5 KD PROTEIN IN; E=5e-07 COG: BH1248; COG0673 Predicted dehydrogenases and related proteins; E=1e-08 PFAM: PF01113; Dihydrodipicolinate reductase; E=0.39 PF01408; Oxidoreductase, NAD-bindi; E=1.3e-23; NADH-dependent dehydrogenase 3718910 1790293 RB6985 Rhodopirellula baltica SH 1 NADH-dependent dehydrogenase NP_867566.1 3717360 D 243090 CDS NP_867567.1 32474573 1790820 complement(3718958..3719206) 1 NC_005027.1 hypothetical protein 3719206 1790820 RB6989 Rhodopirellula baltica SH 1 hypothetical protein NP_867567.1 3718958 R 243090 CDS NP_867568.1 32474574 1793317 complement(3719166..3719456) 1 NC_005027.1 hypothetical protein 3719456 1793317 RB6990 Rhodopirellula baltica SH 1 hypothetical protein NP_867568.1 3719166 R 243090 CDS NP_867569.1 32474575 1794085 complement(3719393..3720892) 1 NC_005027.1 best DB hits: PFAM: PF00429; ENV polyprotein (coat polypro; E=0.67; hypothetical protein 3720892 1794085 RB6991 Rhodopirellula baltica SH 1 hypothetical protein NP_867569.1 3719393 R 243090 CDS NP_867570.1 32474576 1796917 3720852..3721769 1 NC_005027.1 PMID: 9006060 PMID: 2005873 best DB hits: BLAST: swissprot:P94498; CYH1_BACSU PHOSPHOADENOSINE PHOSPHOSULFATE; E=2e-48 swissprot:O06737; CYH2_BACSU PROBABLE PHOSPHOADENOSINE; E=4e-48 ddbj:BAB05205.1; (AP001512) 3'-phosphoadenosine 5'-phosphosulfate; E=3e-47 COG: BS_cysH; COG0175 3'-phosphoadenosine 5'-phosphosulfate; E=2e-49 cysH; COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase; E=1e-17 BU426; COG0175 3'-phosphoadenosine 5'-phosphosulfate; E=2e-13 PFAM: PF01507; Phosphoadenosine phosphosulfate r; E=4.8e-62; phosphoadenosine phosphosulfate reductase 3721769 cysH 1796917 cysH Rhodopirellula baltica SH 1 phosphoadenosine phosphosulfate reductase NP_867570.1 3720852 D 243090 CDS NP_867571.1 32474577 1793474 3721806..3722231 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S75800; hypothetical protein slr0846 - Synechocystis sp.; E=7e-10 swissprot:Q55433; Y846_SYNY3 HYPOTHETICAL 16.4 KD PROTEIN; E=7e-10 swissprot:Q10613; YC87_MYCTU HYPOTHETICAL PROTEIN RV1287 PRECURSOR; E=4e-07 COG: slr0846; COG1959 Predicted transcriptional regulator; E=7e-11 PFAM: PF02082; Uncharacterized protein family UPF00; E=9e-19; hypothetical protein 3722231 1793474 RB6994 Rhodopirellula baltica SH 1 hypothetical protein NP_867571.1 3721806 D 243090 CDS NP_867572.1 32474578 1791843 3722268..3722555 1 NC_005027.1 hypothetical protein 3722555 1791843 RB6995 Rhodopirellula baltica SH 1 hypothetical protein NP_867572.1 3722268 D 243090 CDS NP_867573.1 32474579 1791191 complement(3722505..3724562) 1 NC_005027.1 PMID: 2498283 PMID: 814121 best DB hits: BLAST: pir:D72335; flagellin - Thermotoga maritima (strain MSB8) -----; E=2e-18 gb:AAC01555.1; (AF007122) flagellin [Vibrio cholerae]; E=1e-17 pir:C82112; flagellin FlaE VC2144 [imported] - Vibrio cholerae; E=1e-17 COG: TM0758; COG1344 Flagellin and related hook-associated proteins; E=2e-19 PFAM: PF00669; Bacterial flagellin N-terminus; E=1.1e-25 PF00700; Bacterial flagellin C-terminus; E=7.2e-18; flagellin 3724562 fliC 1791191 fliC Rhodopirellula baltica SH 1 flagellin NP_867573.1 3722505 R 243090 CDS NP_867574.1 32474580 1796595 complement(3724601..3724768) 1 NC_005027.1 hypothetical protein 3724768 1796595 RB6999 Rhodopirellula baltica SH 1 hypothetical protein NP_867574.1 3724601 R 243090 CDS NP_867575.1 32474581 1795012 3724763..3725806 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:C75407; excinuclease ABC chain C - Deinococcus radiodurans; E=5e-04 ddbj:BAA85760.1; (AB033748) UVR-C protein [Deinococcus; E=0.003 swissprot:P73580; UVRC_SYNY3 EXCINUCLEASE ABC SUBUNIT C -----; E=0.008 COG: DR1354; COG0322 Nuclease subunit of the excinuclease complex; E=4e-05 PFAM: PF01541; Endo/excinuclease amino termin; E=2.9e-05; excinuclease ABC subunit C 3725806 uvrC 1795012 uvrC Rhodopirellula baltica SH 1 excinuclease ABC subunit C NP_867575.1 3724763 D 243090 CDS NP_867576.1 32474582 1791678 3725925..3726623 1 NC_005027.1 hypothetical protein 3726623 1791678 RB7002 Rhodopirellula baltica SH 1 hypothetical protein NP_867576.1 3725925 D 243090 CDS NP_867577.1 32474583 1792740 complement(3726656..3727471) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:E70082; glucose 1-dehydrogenase homolog yxnA - Bacillus subtilis; E=2e-21 gb:AAG18928.1; (AE004994) oxidoreductase; YusZ3 [Halobacterium; E=1e-19 pir:F83229; probable short chain dehydrogenase PA3330 [imported] -; E=1e-18 COG: BS_yxnA; COG1028 Dehydrogenases with different specificities; E=2e-22 PA3330; COG1028 Dehydrogenases with different specificities (related; E=1e-19 VCA1057; COG0300 Short-chain dehydrogenases of various substrate; E=7e-19 PFAM: PF00106; short chain dehydrogenase; E=1.2e-38; glucose 1-dehydrogenase-like protein 3727471 1792740 RB7004 Rhodopirellula baltica SH 1 glucose 1-dehydrogenase-like protein NP_867577.1 3726656 R 243090 CDS NP_867578.1 32474584 1796986 complement(3727474..3728853) 1 NC_005027.1 PMID: 8248183 best DB hits: BLAST: swissprot:P25519; HFLX_ECOLI GTP-BINDING PROTEIN HFLX -----; E=2e-82 gb:AAG59369.1; AE005650_8 (AE005650) GTP - binding subunit of; E=2e-81 pir:D82334; GTP-binding protein HflX VC0348 [imported] - Vibrio; E=5e-78 COG: hflX; COG2262 GTPases; E=2e-83 slr1090; COG0536 Predicted GTPase; E=2e-06 PFAM: PF00005; ABC transporter; E=0.53 PF02421; Ferrous iron transport protein B; E=0.00079 PF01926; GTPase of unknown function; E=0.011; GTP-binding protein HflX 3728853 hflX 1796986 hflX Rhodopirellula baltica SH 1 GTP-binding protein HflX NP_867578.1 3727474 R 243090 CDS NP_867579.1 32474585 1790549 complement(3728944..3730368) 1 NC_005027.1 PMID: 6330676 best DB hits: BLAST: swissprot:P71689; UVRC_MYCTU EXCINUCLEASE ABC SUBUNIT C -----; E=4e-44 pir:G81845; excinuclease ABC subunit C NMA1540 [imported] -; E=6e-39 ddbj:BAB06816.1; (AP001517) excinuclease ABC (subunit C); E=2e-38 COG: Rv1420; COG0322 Nuclease subunit of the excinuclease complex; E=3e-45 PFAM: PF01541; Endo/excinuclease amino terminal; E=2.1e-18 PF02151; UvrB/uvrC motif; E=8.4e-11; excinuclease ABC subunit C 3730368 uvrC 1790549 uvrC Rhodopirellula baltica SH 1 excinuclease ABC subunit C NP_867579.1 3728944 R 243090 CDS NP_867580.1 32474586 1793658 complement(3730620..3731789) 1 NC_005027.1 PMID: 10731132 best DB hits: BLAST: gb:AAF54635.1; (AE003691) CG5270 gene product [Drosophila; E=0.17 PFAM: PF02058; Guanylin precursor; E=0.1; hypothetical protein 3731789 1793658 RB7012 Rhodopirellula baltica SH 1 hypothetical protein NP_867580.1 3730620 R 243090 CDS NP_867581.1 32474587 1794089 complement(3731793..3732359) 1 NC_005027.1 hypothetical protein 3732359 1794089 RB7014 Rhodopirellula baltica SH 1 hypothetical protein NP_867581.1 3731793 R 243090 CDS NP_867582.1 32474588 1793278 complement(3732349..3732537) 1 NC_005027.1 hypothetical protein 3732537 1793278 RB7015 Rhodopirellula baltica SH 1 hypothetical protein NP_867582.1 3732349 R 243090 CDS NP_867583.1 32474589 1795529 3732513..3733238 1 NC_005027.1 hypothetical protein 3733238 1795529 RB7016 Rhodopirellula baltica SH 1 hypothetical protein NP_867583.1 3732513 D 243090 CDS NP_867584.1 32474590 1796112 complement(3733282..3733671) 1 NC_005027.1 best DB hits: BLAST: pir:H70988; hypothetical protein Rv1767 - Mycobacterium; E=0.065 pir:C69225; conserved hypothetical protein MTH935 -; E=0.14 COG: Rv1767; COG0599 Uncharacterized ACR, homolog of; E=0.006 PFAM: PF02627; Carboxymuconolactone decarboxylase; E=1e-08; hypothetical protein 3733671 1796112 RB7019 Rhodopirellula baltica SH 1 hypothetical protein NP_867584.1 3733282 R 243090 CDS NP_867585.1 32474591 1793083 complement(3733593..3735125) 1 NC_005027.1 PMID: 7665501 best DB hits: BLAST: gb:AAK00606.1; AF221100_3 (AF221100) uroporphyrinogen III; E=1e-89 swissprot:Q59294; HEM4_CLOJO PORPHYRIN BIOSYNTHESIS PROTEIN HEMD; E=1e-64 gb:AAC18588.1; (AF064061) uroporphyrinogen-III; E=3e-63 COG: NMB1156_2; COG0007 Uroporphyrinogen-III methylase; E=2e-44 sll0166_2; COG1587 Uroporphyrinogen-III synthase; E=7e-30 PFAM: PF00590; Tetrapyrrole (Corrin/Porphyrin); E=1.2e-63 PF02602; Uroporphyrinogen-III synthase H; E=7.1e-43; uroporphyrinogen III synthase/methyltransferase 3735125 hemD 1793083 hemD Rhodopirellula baltica SH 1 uroporphyrinogen III synthase/methyltransferase NP_867585.1 3733593 R 243090 CDS NP_867586.1 32474592 1793537 3735291..3735563 1 NC_005027.1 PMID: 6267039 PMID: 786731 best DB hits: BLAST: pir:F82559; 30S ribosomal protein S20 XF2421 [imported] - Xylella; E=3e-06 pir:A70452; ribosomal protein S20 - Aquifex aeolicus ----- gb:; E=8e-06 pir:E83074; 30S ribosomal protein S20 PA4563 [imported] -; E=1e-05 COG: XF2421; COG0268 Ribosomal protein S20; E=4e-07 PFAM: PF01649; Ribosomal protein S20; E=5.2e-32; 30S ribosomal protein S20 3735563 rpsT 1793537 rpsT Rhodopirellula baltica SH 1 30S ribosomal protein S20 NP_867586.1 3735291 D 243090 CDS NP_867587.1 32474593 1792224 complement(3735792..3736535) 1 NC_005027.1 PMID: 8590279 best DB hits: BLAST: swissprot:Q55909; Y305_SYNY3 HYPOTHETICAL 22.2 KD PROTEIN SLR0305; E=0.003 embl:CAB61866.1; (AL133252) integral membrane protein; E=0.028 gb:AAF69152.1; AC007915_4 (AC007915) F27F5.5 [Arabidopsis; E=0.85 COG: slr0305; COG0398 Uncharacterized ACR; E=3e-04; hypothetical protein 3736535 1792224 RB7023 Rhodopirellula baltica SH 1 hypothetical protein NP_867587.1 3735792 R 243090 CDS NP_867588.1 32474594 1794455 complement(3736532..3736702) 1 NC_005027.1 hypothetical protein 3736702 1794455 RB7026 Rhodopirellula baltica SH 1 hypothetical protein NP_867588.1 3736532 R 243090 CDS NP_867589.1 32474595 1790462 3736673..3736885 1 NC_005027.1 hypothetical protein 3736885 1790462 RB7027 Rhodopirellula baltica SH 1 hypothetical protein NP_867589.1 3736673 D 243090 CDS NP_867590.1 32474596 1795341 3736857..3738494 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:B83295; hypothetical protein PA2794 [imported] - Pseudomonas; E=0.056 gb:AAF60322.1; (AF236853) sialidase [Pseudomonas aeruginosa]; E=0.16 PFAM: PF02012; BNR repeat; E=0.15; hypothetical protein 3738494 1795341 RB7028 Rhodopirellula baltica SH 1 hypothetical protein NP_867590.1 3736857 D 243090 CDS NP_867591.1 32474597 1789995 complement(3738527..3739885) 1 NC_005027.1 hypothetical protein 3739885 1789995 RB7030 Rhodopirellula baltica SH 1 hypothetical protein NP_867591.1 3738527 R 243090 CDS NP_867592.1 32474598 1795296 complement(3739882..3742263) 1 NC_005027.1 PMID: 8244995 best DB hits: BLAST: pir:A49551; filamin, Muller cell - chicken ----- gb:; E=0.77; filamin 3742263 1795296 RB7033 Rhodopirellula baltica SH 1 filamin NP_867592.1 3739882 R 243090 CDS NP_867593.1 32474599 1797091 3742454..3742618 1 NC_005027.1 hypothetical protein 3742618 1797091 RB7036 Rhodopirellula baltica SH 1 hypothetical protein NP_867593.1 3742454 D 243090 CDS NP_867594.1 32474600 1791220 complement(3742675..3742908) 1 NC_005027.1 hypothetical protein 3742908 1791220 RB7037 Rhodopirellula baltica SH 1 hypothetical protein NP_867594.1 3742675 R 243090 CDS NP_867595.1 32474601 1790017 3742902..3743555 1 NC_005027.1 hypothetical protein 3743555 1790017 RB7038 Rhodopirellula baltica SH 1 hypothetical protein NP_867595.1 3742902 D 243090 CDS NP_867596.1 32474602 1795928 complement(3742965..3743573) 1 NC_005027.1 hypothetical protein 3743573 1795928 RB7039 Rhodopirellula baltica SH 1 hypothetical protein NP_867596.1 3742965 R 243090 CDS NP_867597.1 32474603 1792966 complement(3743753..3744025) 1 NC_005027.1 hypothetical protein 3744025 1792966 RB7041 Rhodopirellula baltica SH 1 hypothetical protein NP_867597.1 3743753 R 243090 CDS NP_867598.1 32474604 1790399 3743971..3744246 1 NC_005027.1 hypothetical protein 3744246 1790399 RB7042 Rhodopirellula baltica SH 1 hypothetical protein NP_867598.1 3743971 D 243090 CDS NP_867599.1 32474605 1790584 3744340..3744798 1 NC_005027.1 hypothetical protein 3744798 1790584 RB7045 Rhodopirellula baltica SH 1 hypothetical protein NP_867599.1 3744340 D 243090 CDS NP_867600.1 32474606 1791261 3744905..3745480 1 NC_005027.1 hypothetical protein 3745480 1791261 RB7048 Rhodopirellula baltica SH 1 hypothetical protein NP_867600.1 3744905 D 243090 CDS NP_867601.1 32474607 1796739 3745423..3745623 1 NC_005027.1 hypothetical protein 3745623 1796739 RB7049 Rhodopirellula baltica SH 1 hypothetical protein NP_867601.1 3745423 D 243090 CDS NP_867602.1 32474608 1789922 3745617..3745946 1 NC_005027.1 hypothetical protein 3745946 1789922 RB7050 Rhodopirellula baltica SH 1 hypothetical protein NP_867602.1 3745617 D 243090 CDS NP_867603.1 32474609 1794058 3745943..3746491 1 NC_005027.1 hypothetical protein 3746491 1794058 RB7052 Rhodopirellula baltica SH 1 hypothetical protein NP_867603.1 3745943 D 243090 CDS NP_867604.1 32474610 1794772 3746488..3746775 1 NC_005027.1 hypothetical protein 3746775 1794772 RB7056 Rhodopirellula baltica SH 1 hypothetical protein NP_867604.1 3746488 D 243090 CDS NP_867605.1 32474611 1795117 3746784..3747071 1 NC_005027.1 hypothetical protein 3747071 1795117 RB7057 Rhodopirellula baltica SH 1 hypothetical protein NP_867605.1 3746784 D 243090 CDS NP_867606.1 32474612 1796935 3747156..3749396 1 NC_005027.1 best DB hits: BLAST: gb:AAD42851.1; AF159689_3 (AF159689) serinethreonine kinase PKN3; E=3e-40 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=5e-38 swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=2e-35 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=5e-39 PFAM: PF00069; Protein kinase domain; E=2.1e-34; serine/threonine kinase 3749396 1796935 RB7058 Rhodopirellula baltica SH 1 serine/threonine kinase NP_867606.1 3747156 D 243090 CDS NP_867607.1 32474613 1791176 complement(3749482..3751161) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:A83099; hypothetical protein PA4371 [imported] - Pseudomonas; E=3e-09 pir:A82220; hypothetical protein VC1265 [imported] - Vibrio cholerae; E=4e-08 pir:E81378; cytochrome-c peroxidase (EC 1.11.1.5) Cj0358; E=0.23; hypothetical protein 3751161 1791176 RB7061 Rhodopirellula baltica SH 1 hypothetical protein NP_867607.1 3749482 R 243090 CDS NP_867608.1 32474614 1794836 3751250..3751696 1 NC_005027.1 hypothetical protein 3751696 1794836 RB7063 Rhodopirellula baltica SH 1 hypothetical protein NP_867608.1 3751250 D 243090 CDS NP_867609.1 32474615 1792988 complement(3751693..3752295) 1 NC_005027.1 hypothetical protein 3752295 1792988 RB7065 Rhodopirellula baltica SH 1 hypothetical protein NP_867609.1 3751693 R 243090 CDS NP_867610.1 32474616 1795635 complement(3752187..3753347) 1 NC_005027.1 hypothetical protein 3753347 1795635 RB7067 Rhodopirellula baltica SH 1 hypothetical protein NP_867610.1 3752187 R 243090 CDS NP_867611.1 32474617 1790278 complement(3753366..3753644) 1 NC_005027.1 PMID: 3093467 best DB hits: BLAST: swissprot:P20429; RPOA_BACSU DNA-DIRECTED RNA POLYMERASE ALPHA; E=1e-07 gb:AAA81287.1; (U30821) alpha subunit of RNA polymerase; E=5e-07 swissprot:O50634; RPOA_BACHD DNA-DIRECTED RNA POLYMERASE ALPHA; E=1e-06 COG: BS_rpoA; COG0202 DNA-directed RNA polymerase alpha subunit/40 kD; E=1e-08 PFAM: PF01000; Bacterial RNA polymerase, alpha; E=8.2e-15; DNA-directed RNA polymerase alpha chain 3753644 rpoA 1790278 rpoA Rhodopirellula baltica SH 1 DNA-directed RNA polymerase alpha chain NP_867611.1 3753366 R 243090 CDS NP_867612.1 32474618 1793570 complement(3753783..3754556) 1 NC_005027.1 PMID: 10684935 best DB hits: BLAST: pir:B75110; lipoate-protein ligase A related PAB1916 - Pyrococcus; E=7e-10 pir:F72056; lipoate-protein ligase-related protein CP0129 [imported]; E=2e-09 gb:AAK04161.1; AE006244_10 (AE006244) lipoate-protein ligase; E=2e-09 COG: PAB1916; COG0095 Lipoate-protein ligase A; E=7e-11 PFAM: PF02539; Lipoate-protein ligase A; E=0.00023; lipoate-protein ligase A 3754556 lplA 1793570 lplA Rhodopirellula baltica SH 1 lipoate-protein ligase A NP_867612.1 3753783 R 243090 CDS NP_867613.1 32474619 1796018 complement(3754537..3758208) 1 NC_005027.1 PMID: 9371463 best DB hits: BLAST: pir:F69192; conserved hypothetical protein MTH695 - Methanobacterium; E=0.003 gb:AAG18647.1; (AE004970) Vng0003c [Halobacterium sp. NRC-1]; E=0.015 embl:CAB89462.1; (AL354048) ABC transporter integral; E=0.024 COG: MTH695; COG0577 Predicted permease; E=3e-04 PFAM: PF01890; CbiG; E=0.096 PF02687; Predicted permease; E=5.7e-06 PF00951; Arterivirus GL envelope glycop; E=0.081; ABC transporter permease 3758208 1796018 RB7074 Rhodopirellula baltica SH 1 ABC transporter permease NP_867613.1 3754537 R 243090 CDS NP_867614.1 32474620 1793222 complement(3758205..3758360) 1 NC_005027.1 hypothetical protein 3758360 1793222 RB7077 Rhodopirellula baltica SH 1 hypothetical protein NP_867614.1 3758205 R 243090 CDS NP_867615.1 32474621 1794478 3758295..3760328 1 NC_005027.1 best DB hits: PFAM: PF02321; Outer membrane efflux protein; E=0.52; hypothetical protein 3760328 1794478 RB7078 Rhodopirellula baltica SH 1 hypothetical protein NP_867615.1 3758295 D 243090 CDS NP_867616.1 32474622 1790685 complement(3760290..3760580) 1 NC_005027.1 hypothetical protein 3760580 1790685 RB7080 Rhodopirellula baltica SH 1 hypothetical protein NP_867616.1 3760290 R 243090 CDS NP_867617.1 32474623 1795864 complement(3760558..3761379) 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: pir:D72377; oxidoreductase, short chain dehydrogenasereductase; E=7e-38 gb:AAB90046.1; (AE001021) 2-deoxy-D-gluconate 3-dehydrogenase; E=9e-35 swissprot:P39640; YWFD_BACSU HYPOTHETICAL OXIDOREDUCTASE IN; E=2e-33 COG: TM0441; COG1028 Dehydrogenases with different specificities (related; E=6e-39 BS_ywfD; COG1028 Dehydrogenases with different specificities; E=2e-34 BH2491; COG1028 Dehydrogenases with different specificities (related; E=5e-30 PFAM: PF00106; short chain dehydrogenase; E=2.2e-65 PF00678; Short chain dehydrogenase/reduct; E=1.1e-11; short chain dehydrogenase/reductase oxidoreductase 3761379 1795864 RB7081 Rhodopirellula baltica SH 1 short chain dehydrogenase/reductase oxidoreductase NP_867617.1 3760558 R 243090 CDS NP_867618.1 32474624 1796239 complement(3761407..3761766) 1 NC_005027.1 hypothetical protein 3761766 1796239 RB7082 Rhodopirellula baltica SH 1 hypothetical protein NP_867618.1 3761407 R 243090 CDS NP_867619.1 32474625 1795447 complement(3761774..3763429) 1 NC_005027.1 catalyzes the hydrolysis of pyrophosphate to phosphate; manganese-dependent inorganic pyrophosphatase 3763429 ppaC 1795447 ppaC Rhodopirellula baltica SH 1 manganese-dependent inorganic pyrophosphatase NP_867619.1 3761774 R 243090 CDS NP_867620.1 32474626 1792517 complement(3763435..3763662) 1 NC_005027.1 hypothetical protein 3763662 1792517 RB7085 Rhodopirellula baltica SH 1 hypothetical protein NP_867620.1 3763435 R 243090 CDS NP_867621.1 32474627 1792131 complement(3763705..3764268) 1 NC_005027.1 decarboxylates 4-phosphopantothenoylcysteine to form 4'-phosphopantotheine.; phosphopantothenoylcysteine decarboxylase 3764268 1792131 RB7087 Rhodopirellula baltica SH 1 phosphopantothenoylcysteine decarboxylase NP_867621.1 3763705 R 243090 CDS NP_867622.1 32474628 1790449 complement(3764268..3764540) 1 NC_005027.1 hypothetical protein 3764540 1790449 RB7088 Rhodopirellula baltica SH 1 hypothetical protein NP_867622.1 3764268 R 243090 CDS NP_867623.1 32474629 1791914 complement(3764525..3765154) 1 NC_005027.1 PMID: 8390989 best DB hits: BLAST: swissprot:P24234; KGUA_ECOLI GUANYLATE KINASE (GMP KINASE) -----; E=8e-32 gb:AAG58792.1; AE005592_3 (AE005592) guanylate kinase [Escherichia; E=5e-31 pir:C72223; guanylate kinase - Thermotoga maritima (strain MSB8); E=7e-31 COG: gmk; COG0194 Guanylate kinase; E=8e-33 PFAM: PF01583; Adenylylsulfate kinase; E=0.11 PF00005; ABC transporter; E=0.019 PF00485; Phosphoribulokinase / Uridine; E=0.33; guanylate kinase 3765154 gmk 1791914 gmk Rhodopirellula baltica SH 1 guanylate kinase NP_867623.1 3764525 R 243090 CDS NP_867624.1 32474630 1792127 complement(3765164..3766192) 1 NC_005027.1 PMID: 10192928 best DB hits: BLAST: ddbj:BAB06233.1; (AP001515) BH2514~unknown conserved protein; E=2e-32 pir:C82350; conserved hypothetical protein VC0209 [imported] -; E=1e-30 pir:A69878; conserved hypothetical protein yloC - Bacillus subtilis; E=8e-30 COG: BH2514; COG1561 Uncharacterized stress-induced protein; E=2e-33; hypothetical protein 3766192 1792127 RB7091 Rhodopirellula baltica SH 1 hypothetical protein NP_867624.1 3765164 R 243090 CDS NP_867625.1 32474631 1796662 complement(3766189..3766845) 1 NC_005027.1 hypothetical protein 3766845 1796662 RB7093 Rhodopirellula baltica SH 1 hypothetical protein NP_867625.1 3766189 R 243090 CDS NP_867626.1 32474632 1792807 complement(3766805..3767569) 1 NC_005027.1 PMID: 1452037 best DB hits: BLAST: ddbj:BAB07277.1; (AP001519) triosephosphate isomerase [Bacillus; E=6e-61 swissprot:P35144; TPIS_BACME TRIOSEPHOSPHATE ISOMERASE (TIM); E=1e-59 swissprot:P27876; TPIS_BACSU TRIOSEPHOSPHATE ISOMERASE (TIM); E=3e-58 COG: BH3558; COG0149 Triosephosphate isomerase; E=6e-62 PFAM: PF00121; Triosephosphate isomerase; E=3.8e-140; triosephosphate isomerase 3767569 tpiA 1792807 tpiA Rhodopirellula baltica SH 1 triosephosphate isomerase NP_867626.1 3766805 R 243090 CDS NP_867627.1 32474633 1796145 complement(3767566..3768633) 1 NC_005027.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; 3-deoxy-7-phosphoheptulonate synthase 3768633 aroA 1796145 aroA Rhodopirellula baltica SH 1 3-deoxy-7-phosphoheptulonate synthase NP_867627.1 3767566 R 243090 CDS NP_867628.1 32474634 1793974 complement(3768676..3768837) 1 NC_005027.1 hypothetical protein 3768837 1793974 RB7097 Rhodopirellula baltica SH 1 hypothetical protein NP_867628.1 3768676 R 243090 CDS NP_867629.1 32474635 1794034 3768938..3769519 1 NC_005027.1 PMID: 9139909 best DB hits: BLAST: gb:AAC45219.1; (U87308) extracytoplasmic function alternative; E=3e-10 pir:H70507; probable sigE protein - Mycobacterium tuberculosis; E=4e-09 ddbj:BAB03982.1; (AP001507) RNA polymerase ECF-type sigma factor; E=2e-08 COG: Rv1221; COG1595 DNA-directed RNA polymerase specialized sigma; E=4e-10 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=0.028 PF00140; Sigma-70 factor; E=0.00033 PF01381; Helix-turn-helix; E=0.055; ECF family RNA polymerase sigma factor 3769519 1794034 RB7098 Rhodopirellula baltica SH 1 ECF family RNA polymerase sigma factor NP_867629.1 3768938 D 243090 CDS NP_867630.1 32474636 1796985 3769569..3772226 1 NC_005027.1 PMID: 9278503 best DB hits: BLAST: swissprot:P76481; YFBK_ECOLI HYPOTHETICAL 63.6 KD PROTEIN IN; E=3e-99 embl:CAB75310.1; (AL139164) lipoprotein [Streptomyces; E=4e-54 swissprot:Q55874; Y103_SYNY3 HYPOTHETICAL 45.8 KD PROTEIN SLL0103; E=8e-10 COG: yfbK; COG2304 Protein containing von Willebrand factor (vWF) type A; E=1e-100 sll0103; COG2304 Protein containing von Willebrand factor (vWF) type; E=7e-11 PFAM: PF00092; von Willebrand factor type A domain; E=4.9e-07; hypothetical protein 3772226 1796985 RB7099 Rhodopirellula baltica SH 1 hypothetical protein NP_867630.1 3769569 D 243090 CDS NP_867631.1 32474637 1792167 complement(3772343..3773137) 1 NC_005027.1 PMID: 11792842; hypothetical protein 3773137 1792167 RB7100 Rhodopirellula baltica SH 1 hypothetical protein NP_867631.1 3772343 R 243090 CDS NP_867632.1 32474638 1793203 complement(3773179..3774120) 1 NC_005027.1 best DB hits: BLAST: swissprot:Q19200; STO1_CAEEL STO-1 PROTEIN ----- pir: T15971; E=0.006 embl:CAB94650.1; (AL359215) secreted protein.; E=0.039 pir:E72322; conserved hypothetical protein - Thermotoga maritima; E=0.26; hypothetical protein 3774120 1793203 RB7102 Rhodopirellula baltica SH 1 hypothetical protein NP_867632.1 3773179 R 243090 CDS NP_867633.1 32474639 1793992 complement(3774053..3775084) 1 NC_005027.1 PMID: 9477341 best DB hits: BLAST: embl:CAB64583.1; (AL135941) hypothetical protein L391.06; E=0.003 gb:AAK04726.1; AE006295_7 (AE006295) conserved hypothetical; E=0.038 ddbj:BAB10843.1; (AB009053) hypersensitive-induced response; E=0.88; hypothetical protein 3775084 1793992 RB7104 Rhodopirellula baltica SH 1 hypothetical protein NP_867633.1 3774053 R 243090 CDS NP_867634.1 32474640 1794106 3775127..3775240 1 NC_005027.1 hypothetical protein 3775240 1794106 RB7106 Rhodopirellula baltica SH 1 hypothetical protein NP_867634.1 3775127 D 243090 CDS NP_867635.1 32474641 1790089 3775303..3775578 1 NC_005027.1 hypothetical protein 3775578 1790089 RB7108 Rhodopirellula baltica SH 1 hypothetical protein NP_867635.1 3775303 D 243090 CDS NP_867636.1 32474642 1793142 complement(3775546..3775707) 1 NC_005027.1 hypothetical protein 3775707 1793142 RB7109 Rhodopirellula baltica SH 1 hypothetical protein NP_867636.1 3775546 R 243090 CDS NP_867637.1 32474643 1794161 3775658..3775975 1 NC_005027.1 hypothetical protein 3775975 1794161 RB7110 Rhodopirellula baltica SH 1 hypothetical protein NP_867637.1 3775658 D 243090 CDS NP_867638.1 32474644 1790854 complement(3775972..3778017) 1 NC_005027.1 PMID: 2991205 best DB hits: BLAST: swissprot:P07395; SYFB_ECOLI PHENYLALANYL-TRNA SYNTHETASE BETA; E=3e-78 gb:AAG56700.1; AE005394_9 (AE005394) phenylalanine tRNA; E=6e-78 embl:CAA23565.1; (V00291) phenylalanyl-tRNA synthetase; E=3e-77 COG: pheT_2; COG0072 Phenylalanyl-tRNA synthetase beta subunit; E=3e-79 PFAM: PF01588; tRNA binding domain; E=2.2e-05; phenylalanyl-tRNA synthetase beta chain 3778017 pheT 1790854 pheT Rhodopirellula baltica SH 1 phenylalanyl-tRNA synthetase beta chain NP_867638.1 3775972 R 243090 CDS NP_867639.1 32474645 1794868 3777977..3778117 1 NC_005027.1 hypothetical protein 3778117 1794868 RB7113 Rhodopirellula baltica SH 1 hypothetical protein NP_867639.1 3777977 D 243090 CDS NP_867640.1 32474646 1792168 complement(3778209..3779252) 1 NC_005027.1 PMID: 6317865 best DB hits: BLAST: embl:CAA23564.1; (V00291) phenylalanyl-tRNA synthetase; E=6e-76 gb:AAA51469.1; (K02844) phenylalanyl-tRNA synthetase; E=6e-76 swissprot:P08312; SYFA_ECOLI PHENYLALANYL-TRNA SYNTHETASE ALPHA; E=3e-75 COG: pheS; COG0016 Phenylalanyl-tRNA synthetase alpha subunit; E=3e-76 PFAM: PF02912; Aminoacyl tRNA synthetase class; E=3.9e-08 PF01409; tRNA synthetases class II (F); E=9.4e-92; phenylalanyl-tRNA synthetase alpha chain 3779252 pheS 1792168 pheS Rhodopirellula baltica SH 1 phenylalanyl-tRNA synthetase alpha chain NP_867640.1 3778209 R 243090 CDS NP_867641.1 32474647 1795839 complement(3779262..3779618) 1 NC_005027.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 3779618 rplT 1795839 rplT Rhodopirellula baltica SH 1 50S ribosomal protein L20 NP_867641.1 3779262 R 243090 CDS NP_867642.1 32474648 1797014 3779586..3779765 1 NC_005027.1 hypothetical protein 3779765 1797014 RB7116 Rhodopirellula baltica SH 1 hypothetical protein NP_867642.1 3779586 D 243090 CDS NP_867643.1 32474649 1791232 complement(3779777..3780322) 1 NC_005027.1 PMID: 9823893 best DB hits: BLAST: swissprot:Q9ZCV1; RL35_RICPR 50S RIBOSOMAL PROTEIN L35 -----; E=0.55 PFAM: PF01632; Ribosomal protein L35; E=2.6e-15; 50S ribosomal protein L35 3780322 rpmI 1791232 rpmI Rhodopirellula baltica SH 1 50S ribosomal protein L35 NP_867643.1 3779777 R 243090 CDS NP_867644.1 32474650 1792345 3780434..3781474 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:A83355; hypothetical protein PA2336 [imported] - Pseudomonas; E=0.022; hypothetical protein 3781474 1792345 RB7120 Rhodopirellula baltica SH 1 hypothetical protein NP_867644.1 3780434 D 243090 CDS NP_867645.1 32474651 1797057 complement(3781519..3781962) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:D75276; response regulator - Deinococcus radiodurans (strain R1); E=4e-14 pir:A75522; response regulator - Deinococcus radiodurans (strain R1); E=8e-14 pir:D75617; response regulator - Deinococcus radiodurans (strain R1); E=4e-13 COG: DR2420; COG0784 CheY-like receiver domains; E=4e-15 sll0921; COG2197 Response regulators consisting of a CheY-like; E=1e-05 VC1349_3; COG0784 CheY-like receiver domains; E=3e-05 PFAM: PF00072; Response regulator receiver doma; E=5.6e-13; response regulator 3781962 1797057 RB7123 Rhodopirellula baltica SH 1 response regulator NP_867645.1 3781519 R 243090 CDS NP_867646.1 32474652 1794135 3781950..3782189 1 NC_005027.1 hypothetical protein 3782189 1794135 RB7125 Rhodopirellula baltica SH 1 hypothetical protein NP_867646.1 3781950 D 243090 CDS NP_867647.1 32474653 1794412 complement(3782200..3782373) 1 NC_005027.1 hypothetical protein 3782373 1794412 RB7127 Rhodopirellula baltica SH 1 hypothetical protein NP_867647.1 3782200 R 243090 CDS NP_867648.1 32474654 1796368 complement(3782370..3782627) 1 NC_005027.1 hypothetical protein 3782627 1796368 RB7128 Rhodopirellula baltica SH 1 hypothetical protein NP_867648.1 3782370 R 243090 CDS NP_867649.1 32474655 1791424 3782388..3782618 1 NC_005027.1 hypothetical protein 3782618 1791424 RB7129 Rhodopirellula baltica SH 1 hypothetical protein NP_867649.1 3782388 D 243090 CDS NP_867650.1 32474656 1796247 3782615..3784630 1 NC_005027.1 PMID: 8890205 best DB hits: BLAST: pir:F82744; ferrous iron transport protein B XF0933 [imported] -; E=7e-89 pir:T03547; probable ferrous iron transport protein b - Rhodobacter; E=3e-84 gb:AAB91270.1; (AE001111) iron (II) transporter (feoB-2); E=8e-80 COG: XF0933; COG0370 Ferrous ion uptake system protein FeoB (predicted; E=6e-90 PFAM: PF01926; GTPase of unknown function; E=0.029 PF02421; Ferrous iron transport protei; E=1.5e-56; ferrous iron transport protein B 3784630 feoB 1796247 feoB Rhodopirellula baltica SH 1 ferrous iron transport protein B NP_867650.1 3782615 D 243090 CDS NP_867651.1 32474657 1791398 complement(3784662..3786194) 1 NC_005027.1 PMID: 93377076 best DB hits: PFAM: PF02470; mce related protein; E=1.5e-09; hypothetical protein 3786194 1791398 RB7131 Rhodopirellula baltica SH 1 hypothetical protein NP_867651.1 3784662 R 243090 CDS NP_867652.1 32474658 1793993 complement(3786198..3787082) 1 NC_005027.1 PMID: 10710307 best DB hits: BLAST: pir:G81022; ABC transporter ATP-binding protein NMB1966 [imported]; E=1e-40 pir:B81966; probable ABC transport ATP-binding protein NMA0485; E=2e-40 swissprot:O06784; MKL_MYCTU POSSIBLE RIBONUCLEOTIDE TRANSPORT; E=1e-38 COG: NMB1966; COG1127 Uncharacterized ABC-type transport system, ATPase; E=1e-41 PA2350; COG1135 Uncharacterized ABC-type transport system ATPase; E=1e-32 XF0421; COG1127 Uncharacterized ABC-type transport system, ATPase; E=3e-32 PFAM: PF00006; ATP synthase alpha/beta family, n; E=0.092 PF00485; Phosphoribulokinase / Uridine kin; E=0.42 PF00005; ABC transporter; E=1.2e-54; ABC transporter ATP-binding protein 3787082 1793993 RB7134 Rhodopirellula baltica SH 1 ABC transporter ATP-binding protein NP_867652.1 3786198 R 243090 CDS NP_867653.1 32474659 1790169 complement(3787082..3787972) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:G71718; hypothetical protein RP096 - Rickettsia prowazekii; E=4e-38 pir:E70331; conserved hypothetical protein aq_355 - Aquifex aeolicus; E=6e-37 pir:S74989; hypothetical protein slr1045 - Synechocystis sp. (strain; E=5e-35 COG: RP096; COG0767 Permease component of an ABC-transporter; E=3e-39 PFAM: PF02405; Domain of unknown function DUF140; E=4.8e-79; ABC transporter permease 3787972 1790169 RB7135 Rhodopirellula baltica SH 1 ABC transporter permease NP_867653.1 3787082 R 243090 CDS NP_867654.1 32474660 1795076 3787932..3788138 1 NC_005027.1 hypothetical protein 3788138 1795076 RB7136 Rhodopirellula baltica SH 1 hypothetical protein NP_867654.1 3787932 D 243090 CDS NP_867655.1 32474661 1795966 3788086..3788256 1 NC_005027.1 hypothetical protein 3788256 1795966 RB7137 Rhodopirellula baltica SH 1 hypothetical protein NP_867655.1 3788086 D 243090 CDS NP_867656.1 32474662 1796950 complement(3788253..3790112) 1 NC_005027.1 PMID: 10731132 best DB hits: BLAST: gb:AAF56315.1; (AE003748) CG13625 gene product [Drosophila; E=0.27; hypothetical protein 3790112 1796950 RB7138 Rhodopirellula baltica SH 1 hypothetical protein NP_867656.1 3788253 R 243090 CDS NP_867657.1 32474663 1794033 3790286..3791179 1 NC_005027.1 PMID: 9384377 best DB hits: BLAST: pir:A70081; conserved hypothetical protein yxkH - Bacillus subtilis; E=2e-10 pir:A82350; conserved hypothetical protein VC0239 [imported] -; E=6e-09 pir:D82751; conserved hypothetical protein XF0878 [imported] -; E=2e-08 COG: BS_yxkH; COG0726 Predicted xylanase/chitin deacetylase; E=2e-11 PFAM: PF01522; Polysaccharide deacetylase; E=0.036; xylanase/chitin deacetylase 3791179 1794033 RB7144 Rhodopirellula baltica SH 1 xylanase/chitin deacetylase NP_867657.1 3790286 D 243090 CDS NP_867658.1 32474664 1795403 3791176..3792408 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: pir:E72354; probable hexosyltransferase (EC 2.4.1.-) TM0622 -; E=2e-24 gb:AAD50490.1; AF172324_8 (AF172324) WbnE [Escherichia coli]; E=5e-19 pir:E70036; capsular polysaccharide biosynthesis homolog yveP -; E=1e-18 COG: TM0622; COG0438 Predicted glycosyltransferases; E=2e-25 PFAM: PF00534; Glycosyl transferases group 1; E=1.8e-41; hexosyltransferase 3792408 1795403 RB7146 Rhodopirellula baltica SH 1 hexosyltransferase NP_867658.1 3791176 D 243090 CDS NP_867659.1 32474665 1790344 3792422..3793027 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:B83329; probable acyltransferase PA2537 [imported] - Pseudomonas; E=1e-38 gb:AAK04085.1; (AE006236) unknown [Pasteurella multocida]; E=3e-33 pir:A82139; conserved hypothetical protein VC1937 [imported] -; E=3e-13 COG: PA2537; COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; E=1e-39 PFAM: PF01553; Acyltransferase; E=6.5e-16; acyltransferase 3793027 1790344 RB7147 Rhodopirellula baltica SH 1 acyltransferase NP_867659.1 3792422 D 243090 CDS NP_867660.1 32474666 1795048 3793138..3793926 1 NC_005027.1 signal peptide 3793926 1795048 RB7149 Rhodopirellula baltica SH 1 signal peptide NP_867660.1 3793138 D 243090 CDS NP_867661.1 32474667 1796236 complement(3793943..3795199) 1 NC_005027.1 hypothetical protein 3795199 1796236 RB7151 Rhodopirellula baltica SH 1 hypothetical protein NP_867661.1 3793943 R 243090 CDS NP_867662.1 32474668 1796659 complement(3795199..3796536) 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=5e-09 embl:CAB94634.1; (AL359215) secreted glycosyl hydrolase.; E=3e-07 PFAM: PF01302; CAP-Gly domain; E=0.33; secreted glycosyl hydrolase 3796536 1796659 RB7152 Rhodopirellula baltica SH 1 secreted glycosyl hydrolase NP_867662.1 3795199 R 243090 CDS NP_867663.1 32474669 1793996 complement(3796569..3797810) 1 NC_005027.1 best DB hits: BLAST: swissprot:Q50695; YM67_MYCTU HYPOTHETICAL 46.1 KDA PROTEIN RV2267C; E=3e-72 pir:B70675; hypothetical protein Rv3529c - Mycobacterium; E=0.001 pir:T31307; type I fatty acid synthase homolog - Cryptosporidium; E=0.17; hypothetical protein 3797810 1793996 RB7157 Rhodopirellula baltica SH 1 hypothetical protein NP_867663.1 3796569 R 243090 CDS NP_867664.1 32474670 1796259 3798000..3798320 1 NC_005027.1 best DB hits: BLAST: pir:D75036; hypothetical protein PAB3319 - Pyrococcus abyssi (strain; E=3e-24 pir:C71127; hypothetical protein PHS025 - Pyrococcus horikoshii; E=1e-17 gb:AAB90424.1; (AE001047) A. fulgidus predicted coding region; E=9e-17 COG: PAB3319; COG1694 Predicted pyrophosphatase; E=3e-25; hypothetical protein 3798320 1796259 RB7161 Rhodopirellula baltica SH 1 hypothetical protein NP_867664.1 3798000 D 243090 CDS NP_867665.1 32474671 1796409 3798275..3800659 1 NC_005027.1 hypothetical protein 3800659 1796409 RB7162 Rhodopirellula baltica SH 1 hypothetical protein NP_867665.1 3798275 D 243090 CDS NP_867666.1 32474672 1796544 3800705..3801643 1 NC_005027.1 PMID: 9389475 best DB hits: BLAST: pir:S74476; ABC-type transport protein slr1113 - Synechocystis sp.; E=3e-48 pir:S76626; ABC-type transport protein sll0489 - Synechocystis sp.; E=2e-42 gb:AAB90107.1; (AE001025) ABC transporter ATP-binding protein; E=2e-40 COG: slr1113; COG1131 ABC-type multidrug transport system, ATPase; E=2e-49 BH1054_2; COG0842 Permease component of an ABC-transporter; E=6e-41 PA3672; COG1131 ABC-type multidrug transport system, ATPase; E=2e-39 PFAM: PF00005; ABC transporter; E=9.2e-45; ABC transporter ATP-binding protein 3801643 1796544 RB7166 Rhodopirellula baltica SH 1 ABC transporter ATP-binding protein NP_867666.1 3800705 D 243090 CDS NP_867667.1 32474673 1795979 3801693..3802277 1 NC_005027.1 PMID: 7806516 best DB hits: BLAST: gb:AAK04875.1; AE006311_6 (AE006311); E=3e-11 pir:D70065; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase; E=5e-11 gb:AAF98278.1; AF197933_8 (AF197933) beta-hydroxyacyl-ACP; E=9e-11 COG: BS_ywpB; COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier; E=5e-12 PFAM: PF01377; Thioester dehydrase; E=6e-11; hydroxymyristoyl-(acyl carrier protein) dehydratase 3802277 fabZ 1795979 fabZ Rhodopirellula baltica SH 1 hydroxymyristoyl-(acyl carrier protein) dehydratase NP_867667.1 3801693 D 243090 CDS NP_867668.1 32474674 1791193 3802304..3802693 1 NC_005027.1 PMID: 1556094 best DB hits: BLAST: gb:AAC35700.1; (AF041468) acyl carrier protein [Guillardia; E=2e-06 pir:C41609; acyl carrier protein - Cryptomonas sp. chloroplast; E=3e-06 swissprot:P20804; ACP_SYNY3 ACYL CARRIER PROTEIN (ACP) -----; E=1e-05 COG: ssl2084; COG0236 Acyl carrier protein; E=1e-06 PFAM: PF00550; Phosphopantetheine attachment site; E=3.6e-07; acyl carrier protein 3802693 acpP 1791193 acpP Rhodopirellula baltica SH 1 acyl carrier protein NP_867668.1 3802304 D 243090 CDS NP_867669.1 32474675 1795258 3802650..3803231 1 NC_005027.1 PMID: 7806516 best DB hits: BLAST: ddbj:BAB07454.1; (AP001519) hydroxymyristoyl-(acyl carrier; E=4e-09 pir:A70305; (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase; E=5e-09 pir:H71826; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase; E=7e-09 COG: BH3735; COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier; E=4e-10 PFAM: PF01377; Thioester dehydrase; E=0.00031; hydroxymyristoyl-(acyl carrier protein) dehydratase 3803231 fabZ 1795258 fabZ Rhodopirellula baltica SH 1 hydroxymyristoyl-(acyl carrier protein) dehydratase NP_867669.1 3802650 D 243090 CDS NP_867670.1 32474676 1790882 3803238..3804527 1 NC_005027.1 PMID: 7768872 best DB hits: BLAST: ddbj:BAB06601.1; (AP001517) 3-oxoacyl-(acyl-carrier protein); E=4e-93 pir:G69842; 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); E=5e-91 pir:S77464; 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); E=6e-88 COG: BH2882; COG0304 3-oxoacyl-(acyl-carrier-protein) synthase I; E=4e-94 PFAM: PF00109; Beta-ketoacyl synthase, N-ter; E=6.3e-46 PF02801; Beta-ketoacyl synthase, C-ter; E=5.1e-73; 3-oxoacyl-ACP synthase 3804527 fabF 1790882 fabF Rhodopirellula baltica SH 1 3-oxoacyl-ACP synthase NP_867670.1 3803238 D 243090 CDS NP_867671.1 32474677 1790702 3804503..3804709 1 NC_005027.1 hypothetical protein 3804709 1790702 RB7172 Rhodopirellula baltica SH 1 hypothetical protein NP_867671.1 3804503 D 243090 CDS NP_867672.1 32474678 1792562 complement(3804665..3805858) 1 NC_005027.1 PMID: 2198286 best DB hits: BLAST: gb:AAD47627.1; (AF153713) octylprenyl diphosphate synthase-like; E=6e-40 pir:C83075; octaprenyl-diphosphate synthase PA4569 [imported] -; E=8e-40 ddbj:BAA22867.1; (AB001997) solanesyl diphosphate synthase; E=7e-37 COG: PA4569; COG0142 Geranylgeranyl pyrophosphate synthase; E=7e-41 PFAM: PF00348; Polyprenyl synthetase; E=1.4e-49; polyprenyl synthetase 3805858 1792562 RB7173 Rhodopirellula baltica SH 1 polyprenyl synthetase NP_867672.1 3804665 R 243090 CDS NP_867673.1 32474679 1792527 complement(3805958..3806569) 1 NC_005027.1 PMID: 8361352 best DB hits: BLAST: pir:T46857; molybdenum cofactor biosynthesis protein C [imported] -; E=4e-23 swissprot:P30747; MOAC_ECOLI MOLYBDENUM COFACTOR BIOSYNTHESIS; E=8e-23 pdb:1EKR; A Chain A, Moac Protein From E. Coli; E=1e-22 COG: moaC; COG0315 Molybdenum cofactor biosynthesis enzyme; E=8e-24 PFAM: PF01967; MoaC family; E=4.4e-71; molybdenum cofactor biosynthesis protein C 3806569 MoaC 1792527 MoaC Rhodopirellula baltica SH 1 molybdenum cofactor biosynthesis protein C NP_867673.1 3805958 R 243090 CDS NP_867674.1 32474680 1796654 complement(3806643..3806783) 1 NC_005027.1 hypothetical protein 3806783 1796654 RB7176 Rhodopirellula baltica SH 1 hypothetical protein NP_867674.1 3806643 R 243090 CDS NP_867675.1 32474681 1789906 complement(3806784..3806891) 1 NC_005027.1 hypothetical protein 3806891 1789906 RB7177 Rhodopirellula baltica SH 1 hypothetical protein NP_867675.1 3806784 R 243090 CDS NP_867676.1 32474682 1795779 3806924..3807061 1 NC_005027.1 hypothetical protein 3807061 1795779 RB7178 Rhodopirellula baltica SH 1 hypothetical protein NP_867676.1 3806924 D 243090 CDS NP_867677.1 32474683 1793091 complement(3807031..3807345) 1 NC_005027.1 hypothetical protein 3807345 1793091 RB7180 Rhodopirellula baltica SH 1 hypothetical protein NP_867677.1 3807031 R 243090 CDS NP_867678.1 32474684 1792446 3807517..3808089 1 NC_005027.1 best DB hits: BLAST: gb:AAD12184.1; (U57900) utilizing regulatory protein tutC; E=4e-04 pir:S76529; hypothetical protein - Synechocystis sp. (strain PCC; E=0.002 embl:CAB88489.1; (AL353816) two-component systen; E=0.003 COG: sll0396; COG0745 Response regulators consisting of a CheY-like; E=2e-04 BB0419_1; COG0784 CheY-like receiver domains; E=8e-04 slr0115; COG0745 Response regulators consisting of a CheY-like; E=8e-04 PFAM: PF00072; Response regulator receiver do; E=0.027; two-component regulatory protein 3808089 1792446 RB7184 Rhodopirellula baltica SH 1 two-component regulatory protein NP_867678.1 3807517 D 243090 CDS NP_867679.1 32474685 1795399 complement(3808134..3808352) 1 NC_005027.1 hypothetical protein 3808352 1795399 RB7185 Rhodopirellula baltica SH 1 hypothetical protein NP_867679.1 3808134 R 243090 CDS NP_867680.1 32474686 1797189 3808152..3808364 1 NC_005027.1 hypothetical protein 3808364 1797189 RB7186 Rhodopirellula baltica SH 1 hypothetical protein NP_867680.1 3808152 D 243090 CDS NP_867681.1 32474687 1795429 3808328..3808534 1 NC_005027.1 hypothetical protein 3808534 1795429 RB7188 Rhodopirellula baltica SH 1 hypothetical protein NP_867681.1 3808328 D 243090 CDS NP_867682.1 32474688 1792042 3808531..3810435 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: pir:C72374; hypothetical protein TM0467 - Thermotoga maritima; E=3e-16 embl:CAB56681.1; (AL121596) hypothetical protein SCF51A.29c; E=2e-14 embl:CAC01561.1; (AL391039) conserved hypothetical protein; E=4e-14 COG: TM0467; COG2208 Serine phosphatase RsbU, regulator of sigma subunit; E=3e-17 Rv1827; COG1716 FHA-domain-containing proteins; E=1e-09 slr1860_2; COG2208 Serine phosphatase RsbU, regulator of sigma; E=4e-09 PFAM: PF00498; FHA domain; E=1.4e-20 PF01590; GAF domain; E=3.5e-17; regulatory protein 3810435 1792042 RB7190 Rhodopirellula baltica SH 1 regulatory protein NP_867682.1 3808531 D 243090 CDS NP_867683.1 32474689 1795094 3810464..3811585 1 NC_005027.1 PMID: 9477341 best DB hits: BLAST: pir:T04014; hypothetical protein F17A8.20 - Arabidopsis thaliana; E=4e-45 pir:T14319; protein AX110P - carrot ----- ddbj: BAA03455.1; E=2e-35 embl:CAB55380.1; (AL117263) oxidoreductase [Leishmania; E=6e-35 COG: BH3843; COG0673 Predicted dehydrogenases and related proteins; E=2e-26 PFAM: PF01408; Oxidoreductase, NAD-bin; E=0.0035 PF02894; Oxidoreductase, C-termi; E=0.11; oxidoreductase 3811585 1795094 RB7193 Rhodopirellula baltica SH 1 oxidoreductase NP_867683.1 3810464 D 243090 CDS NP_867684.1 32474690 1791487 complement(3811643..3812563) 1 NC_005027.1 hypothetical protein 3812563 1791487 RB7194 Rhodopirellula baltica SH 1 hypothetical protein NP_867684.1 3811643 R 243090 CDS NP_867685.1 32474691 1793104 complement(3812570..3812842) 1 NC_005027.1 hypothetical protein 3812842 1793104 RB7195 Rhodopirellula baltica SH 1 hypothetical protein NP_867685.1 3812570 R 243090 CDS NP_867686.1 32474692 1795992 3812895..3813479 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S74786; hypothetical protein slr1083 - Synechocystis sp. (strain; E=3e-16 embl:CAA77141.1; (Y18353) hypothetical protein [Thermus; E=2e-14 embl:CAA71549.1; (Y10525) arg-ORF1 [Thermus thermophilus]; E=2e-14; hypothetical protein 3813479 1795992 RB7196 Rhodopirellula baltica SH 1 hypothetical protein NP_867686.1 3812895 D 243090 CDS NP_867687.1 32474693 1790170 3813552..3813956 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S74550; hypothetical protein slr0240 - Synechocystis sp. (strain; E=9e-07 swissprot:O07127; YPTY_LACSK HYPOTHETICAL 16.5 KD PROTEIN IN PTSI; E=3e-04 swissprot:Q47839; COPY_ENTHR COPAB ATPASES METAL-FIST TYPE; E=0.052; hypothetical protein 3813956 1790170 RB7198 Rhodopirellula baltica SH 1 hypothetical protein NP_867687.1 3813552 D 243090 CDS NP_867688.1 32474694 1794048 3813928..3817935 1 NC_005027.1 PMID: 3040663 PMID: 3260234 PMID: 2404938 best DB hits: BLAST: swissprot:P12287; BLAR_BACLI REGULATORY PROTEIN BLAR1 -----; E=1e-12 pir:I39942; penicillinase antirepressor penJ - Bacillus; E=1e-11 swissprot:P26597; MECR_STAEP METHICILLIN RESISTANCE MECR1 PROTEIN; E=6e-05 PFAM: PF02687; Predicted permease; E=0.51; penicillin resistance regulatory protein 3817935 1794048 RB7200 Rhodopirellula baltica SH 1 penicillin resistance regulatory protein NP_867688.1 3813928 D 243090 CDS NP_867689.1 32474695 1796219 complement(3817957..3819441) 1 NC_005027.1 PMID: 3515318 PMID: 6330676 best DB hits: BLAST: swissprot:P07028; UVRC_ECOLI EXCINUCLEASE ABC SUBUNIT C; E=5e-20 ddbj:BAA15733.1; (D90832) Excinuclease ABC subunit C.; E=5e-20 pir:G81845; excinuclease ABC subunit C NMA1540 [imported] -; E=6e-20 COG: NMB1326; COG0322 Nuclease subunit of the excinuclease complex; E=2e-20 PFAM: PF01541; Endo/excinuclease amino terminal; E=1.1e-10 PF02151; UvrB/uvrC motif; E=0.00034; exinuclease ABC subunit C 3819441 1796219 RB7201 Rhodopirellula baltica SH 1 exinuclease ABC subunit C NP_867689.1 3817957 R 243090 CDS NP_867690.1 32474696 1796274 3819614..3820057 1 NC_005027.1 hypothetical protein 3820057 1796274 RB7203 Rhodopirellula baltica SH 1 hypothetical protein NP_867690.1 3819614 D 243090 CDS NP_867691.1 32474697 1793057 3820027..3821178 1 NC_005027.1 PMID: 12024217; hypothetical protein 3821178 1793057 RB7205 Rhodopirellula baltica SH 1 hypothetical protein NP_867691.1 3820027 D 243090 CDS NP_867692.1 32474698 1794897 3821302..3822627 1 NC_005027.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 3822627 thiC 1794897 thiC Rhodopirellula baltica SH 1 thiamine biosynthesis protein ThiC NP_867692.1 3821302 D 243090 CDS NP_867693.1 32474699 1791491 3822537..3822896 1 NC_005027.1 hypothetical protein 3822896 1791491 RB7207 Rhodopirellula baltica SH 1 hypothetical protein NP_867693.1 3822537 D 243090 CDS NP_867694.1 32474700 1796688 3822824..3823360 1 NC_005027.1 best DB hits: PFAM: PF02151; UvrB/uvrC motif; E=5.6e-08; hypothetical protein 3823360 1796688 RB7208 Rhodopirellula baltica SH 1 hypothetical protein NP_867694.1 3822824 D 243090 CDS NP_867695.1 32474701 1790054 3823406..3824188 1 NC_005027.1 signal peptide 3824188 1790054 RB7209 Rhodopirellula baltica SH 1 signal peptide NP_867695.1 3823406 D 243090 CDS NP_867696.1 32474702 1792457 complement(3824196..3824885) 1 NC_005027.1 PMID: 98196666 PMID: 9537320 best DB hits: BLAST: swissprot:O67053; PHOU_AQUAE PHOSPHATE TRANSPORT SYSTEM PROTEIN; E=1e-30 swissprot:Q51547; PHOU_PSEAE PHOSPHATE TRANSPORT SYSTEM PROTEIN; E=6e-23 swissprot:Q9Z410; PHOU_PSEPU PHOSPHATE TRANSPORT SYSTEM PROTEIN; E=4e-22 COG: aq_906; COG0704 Phosphate uptake regulator; E=1e-31; phosphate transporter PhoU 3824885 phoU 1792457 phoU Rhodopirellula baltica SH 1 phosphate transporter PhoU NP_867696.1 3824196 R 243090 CDS NP_867697.1 32474703 1795872 complement(3824962..3825810) 1 NC_005027.1 PMID: 96337999 PMID: 8688087 best DB hits: BLAST: swissprot:Q58418; PSTB_METJA PROBABLE PHOSPHATE TRANSPORT; E=2e-84 swissprot:P07655; PSTB_ECOLI PHOSPHATE TRANSPORT ATP-BINDING; E=3e-82 ddbj:BAA22864.1; (D89963) peripheral membrane protein; E=6e-81 COG: MJ1012; COG1117 ABC-type phosphate transport system, ATPase; E=2e-85 pstB; COG1117 ABC-type phosphate transport system, ATPase component; E=3e-83 PA5366; COG1117 ABC-type phosphate transport system, ATPase; E=7e-82 PFAM: PF00005; ABC transporter; E=3.1e-55; phosphate ABC transporter ATP-binding protein 3825810 pstB 1795872 pstB Rhodopirellula baltica SH 1 phosphate ABC transporter ATP-binding protein NP_867697.1 3824962 R 243090 CDS NP_867698.1 32474704 1790688 complement(3825820..3827088) 1 NC_005027.1 PMID: 99411980 best DB hits: BLAST: ddbj:BAB06711.1; (AP001517) phosphate ABC transporter (permease); E=1e-26 gb:AAB89888.1; (AE001010) phosphate ABC transporter, permease; E=1e-25 pir:D82504; phosphate ABC transporter, permease VCA0072; E=6e-17 COG: BH2992; COG0581 ABC-type phosphate transport system, permease; E=9e-28 MTH1729; COG0573 ABC-type phosphate transport system, permease; E=1e-16 sll0682; COG0581 ABC-type phosphate transport system, permease; E=4e-16 PFAM: PF00060; Ligand-gated ion channel; E=0.035 PF00528; Binding-protein-dependent transpor; E=1.1e-15; phosphate ABC transporter (permease) 3827088 pstA 1790688 pstA Rhodopirellula baltica SH 1 phosphate ABC transporter (permease) NP_867698.1 3825820 R 243090 CDS NP_867699.1 32474705 1795137 complement(3827123..3828070) 1 NC_005027.1 PMID: 99411980 best DB hits: BLAST: ddbj:BAB06712.1; (AP001517) phosphate ABC transporter (permease); E=2e-59 gb:AAG18997.1; (AE004999) phosphate ABC transporter permease; E=4e-48 gb:AAB89889.1; (AE001010) phosphate ABC transporter, permease; E=1e-46 COG: BH2993; COG0573 ABC-type phosphate transport system, permease; E=2e-60 VCA0072; COG0581 ABC-type phosphate transport system, permease; E=4e-22 HI1382; COG0573 ABC-type phosphate transport system, permease; E=6e-22 PFAM: PF00528; Binding-protein-dependent tran; E=4.3e-11; phosphate ABC transporter (permease) 3828070 pstC 1795137 pstC Rhodopirellula baltica SH 1 phosphate ABC transporter (permease) NP_867699.1 3827123 R 243090 CDS NP_867700.1 32474706 1796467 complement(3828184..3829116) 1 NC_005027.1 PMID: 95075296 PMID: 7741855 best DB hits: BLAST: swissprot:P39665; SPHX_SYNP7 SPHX PROTEIN PRECURSOR ----- pir:; E=9e-59 swissprot:Q55200; SPHX_SYNY3 SPHX PROTEIN HOMOLOG PRECURSOR; E=4e-56 gb:AAB89890.1; (AE001010) phosphate ABC transporter, periplasmic; E=3e-53 COG: sll0679; COG0226 ABC-type phosphate transport system, periplasmic; E=4e-57 PFAM: PF01449; Phosphate-binding protein; E=2.2e-64; phosphate ABC transporter, periplasmic phosphate-binding protein 3829116 sphX 1796467 sphX Rhodopirellula baltica SH 1 phosphate ABC transporter, periplasmic phosphate-binding protein NP_867700.1 3828184 R 243090 CDS NP_867701.1 32474707 1790007 complement(3829178..3829492) 1 NC_005027.1 hypothetical protein 3829492 1790007 RB7217 Rhodopirellula baltica SH 1 hypothetical protein NP_867701.1 3829178 R 243090 CDS NP_867702.1 32474708 1790595 complement(3829476..3829730) 1 NC_005027.1 hypothetical protein 3829730 1790595 RB7219 Rhodopirellula baltica SH 1 hypothetical protein NP_867702.1 3829476 R 243090 CDS NP_867703.1 32474709 1790568 complement(3829745..3831649) 1 NC_005027.1 PMID: 99411980 best DB hits: BLAST: ddbj:BAB05512.1; (AP001513) carbon starvation-induced protein; E=3e-82 swissprot:O67304; CSTA_AQUAE CARBON STARVATION PROTEIN A HOMOLOG; E=5e-65 pir:E75032; carbon starvation protein A homolog PAB1554 [similarity]; E=1e-53 COG: BH1793; COG1966 Carbon starvation protein, predicted membrane; E=3e-83 yjiY; COG1966 Carbon starvation protein, predicted membrane protein; E=2e-47 jhp1095; COG1966 Carbon starvation protein, predicted membrane; E=3e-47 PFAM: PF02554; Carbon starvation protein CstA; E=2.2e-104; carbon starvation-induced protein 3831649 cstA 1790568 cstA Rhodopirellula baltica SH 1 carbon starvation-induced protein NP_867703.1 3829745 R 243090 CDS NP_867704.1 32474710 1795522 complement(3831646..3832041) 1 NC_005027.1 hypothetical protein 3832041 1795522 RB7221 Rhodopirellula baltica SH 1 hypothetical protein NP_867704.1 3831646 R 243090 CDS NP_867705.1 32474711 1795754 3832051..3833184 1 NC_005027.1 best DB hits: BLAST: gb:AAB64789.1; (U28372) Similar to Thioredoxin reductase (Swiss; E=2e-76 swissprot:P51978; TRXB_NEUCR THIOREDOXIN REDUCTASE ----- pir:; E=5e-75 gb:AAB68856.1; (U00059) Yhr106wp [Saccharomyces cerevisiae]; E=2e-74 COG: YDR353w; COG0492 Thioredoxin reductase/alkyl hydroperoxide reductase; E=1e-77 VNG1259G; COG0492 Thioredoxin reductase/alkyl hydroperoxide; E=5e-53 BS_trxB; COG0492 Thioredoxin reductase/alkyl hydroperoxide reductase; E=4e-48 PFAM: PF02032; Phytoene dehydrogenase related; E=0.056 PF00070; Pyridine nucleotide-disulphide; E=3.1e-09; thioredoxin reductase 3833184 trx 1795754 trx Rhodopirellula baltica SH 1 thioredoxin reductase NP_867705.1 3832051 D 243090 CDS NP_867706.1 32474712 1790424 3833201..3833392 1 NC_005027.1 hypothetical protein 3833392 1790424 RB7224 Rhodopirellula baltica SH 1 hypothetical protein NP_867706.1 3833201 D 243090 CDS NP_867707.1 32474713 1791832 complement(3833484..3834713) 1 NC_005027.1 signal peptide 3834713 1791832 RB7225 Rhodopirellula baltica SH 1 signal peptide NP_867707.1 3833484 R 243090 CDS NP_867708.1 32474714 1796252 complement(3834777..3836258) 1 NC_005027.1 hypothetical protein 3836258 1796252 RB7228 Rhodopirellula baltica SH 1 hypothetical protein NP_867708.1 3834777 R 243090 CDS NP_867709.1 32474715 1794867 complement(3836255..3839446) 1 NC_005027.1 signal peptide 3839446 1794867 RB7229 Rhodopirellula baltica SH 1 signal peptide NP_867709.1 3836255 R 243090 CDS NP_867710.1 32474716 1793036 complement(3839521..3840168) 1 NC_005027.1 best DB hits: BLAST: pir:G69192; ABC transporter (glutamine transport ATP-binding; E=5e-39 pir:A82184; ABC transporter ATP-binding protein VC1568 [imported] -; E=5e-38 pir:H72342; ABC transporter ATP-binding protein - Thermotoga; E=6e-38 COG: MTH696; COG1136 ABC-type (unclassified) transport system, ATPase; E=5e-40 PFAM: PF00005; ABC transporter; E=6.5e-58; glutamine ABC transporter ATP-binding protein 3840168 1793036 RB7232 Rhodopirellula baltica SH 1 glutamine ABC transporter ATP-binding protein NP_867710.1 3839521 R 243090 CDS NP_867711.1 32474717 1793220 3840182..3840385 1 NC_005027.1 hypothetical protein 3840385 1793220 RB7233 Rhodopirellula baltica SH 1 hypothetical protein NP_867711.1 3840182 D 243090 CDS NP_867712.1 32474718 1791262 3840505..3841299 1 NC_005027.1 signal peptide 3841299 1791262 RB7235 Rhodopirellula baltica SH 1 signal peptide NP_867712.1 3840505 D 243090 CDS NP_867713.1 32474719 1790590 3841348..3844023 1 NC_005027.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 3844023 mutS 1790590 mutS Rhodopirellula baltica SH 1 DNA mismatch repair protein MutS NP_867713.1 3841348 D 243090 CDS NP_867714.1 32474720 1790712 complement(3844063..3845838) 1 NC_005027.1 hypothetical protein 3845838 1790712 RB7238 Rhodopirellula baltica SH 1 hypothetical protein NP_867714.1 3844063 R 243090 CDS NP_867715.1 32474721 1797076 3845897..3849013 1 NC_005027.1 best DB hits: BLAST: gb:AAD51954.1; (AF170528) glycoprotein IIb; GPIIb [Oryctolagus; E=0.85; hypothetical protein 3849013 1797076 RB7240 Rhodopirellula baltica SH 1 hypothetical protein NP_867715.1 3845897 D 243090 CDS NP_867716.1 32474722 1790186 3849010..3849603 1 NC_005027.1 best DB hits: BLAST: gb:AAB40278.1; (U82664) hypothetical protein [Escherichia coli]; E=6e-04; hypothetical protein 3849603 1790186 RB7243 Rhodopirellula baltica SH 1 hypothetical protein NP_867716.1 3849010 D 243090 CDS NP_867717.1 32474723 1792847 complement(3849148..3849579) 1 NC_005027.1 PMID: 9317025 best DB hits: BLAST: pir:H82708; peptidyl-prolyl cis-trans isomerase XF1212 [imported] -; E=7e-34 swissprot:O66105; PPIB_TREPA PROBABLE PEPTIDYL-PROLYL CIS-TRANS; E=8e-34 pir:E75543; peptidylprolyl isomerase (EC 5.2.1.8) DR0237; E=1e-30 COG: XF1212; COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) -; E=7e-35 PFAM: PF00160; Cyclophilin type peptidyl-proly; E=1.1e-67; peptidylprolyl isomerase 3849579 ppiB 1792847 ppiB Rhodopirellula baltica SH 1 peptidylprolyl isomerase NP_867717.1 3849148 R 243090 CDS NP_867718.1 32474724 1794373 complement(3849661..3850356) 1 NC_005027.1 hypothetical protein 3850356 1794373 RB7245 Rhodopirellula baltica SH 1 hypothetical protein NP_867718.1 3849661 R 243090 CDS NP_867719.1 32474725 1796126 3850393..3850545 1 NC_005027.1 hypothetical protein 3850545 1796126 RB7246 Rhodopirellula baltica SH 1 hypothetical protein NP_867719.1 3850393 D 243090 CDS NP_867720.1 32474726 1796405 3850538..3851638 1 NC_005027.1 PMID: 2575672 PMID: 1357539 best DB hits: BLAST: swissprot:P04772; GLN2_BRAJA GLUTAMINE SYNTHETASE II; E=1e-103 swissprot:Q02154; GLN2_RHILP GLUTAMINE SYNTHETASE II; E=1e-99 swissprot:P45626; GLN2_RHIME GLUTAMINE SYNTHETASE II; E=9e-97 COG: YPR035w; COG0174 Glutamine synthase; E=5e-83 PFAM: PF00120; Glutamine synthetase; E=3.6e-133; glutamine synthetase II 3851638 glnII 1796405 glnII Rhodopirellula baltica SH 1 glutamine synthetase II NP_867720.1 3850538 D 243090 CDS NP_867721.1 32474727 1796054 3851674..3851874 1 NC_005027.1 hypothetical protein 3851874 1796054 RB7248 Rhodopirellula baltica SH 1 hypothetical protein NP_867721.1 3851674 D 243090 CDS NP_867722.1 32474728 1793249 3851887..3852075 1 NC_005027.1 signal peptide 3852075 1793249 RB7249 Rhodopirellula baltica SH 1 signal peptide NP_867722.1 3851887 D 243090 CDS NP_867723.1 32474729 1795297 complement(3852199..3853488) 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 3853488 1795297 RB7251 Rhodopirellula baltica SH 1 signal peptide NP_867723.1 3852199 R 243090 CDS NP_867724.1 32474730 1792949 3853668..3853847 1 NC_005027.1 hypothetical protein 3853847 1792949 RB7253 Rhodopirellula baltica SH 1 hypothetical protein NP_867724.1 3853668 D 243090 CDS NP_867725.1 32474731 1790623 3853826..3855910 1 NC_005027.1 PMID: 10801787 best DB hits: BLAST: gb:AAF70456.1; AF221952_1 (AF221952) mu-protocadherin [Rattus; E=0.027 gb:AAF46574.1; (AE003450) CG2908 gene product [Drosophila; E=0.041 gb:AAG16897.1; AF182040_1 (AF182040) LAG protein [Mus musculus]; E=0.29; mu-protocadherin 3855910 1790623 RB7254 Rhodopirellula baltica SH 1 mu-protocadherin NP_867725.1 3853826 D 243090 CDS NP_867726.1 32474732 1791528 3855873..3859514 1 NC_005027.1 PMID: 97000351 best DB hits: BLAST: pir:T34946; probable isoleucyl-tRNA synthetase - Streptomyces; E=0.0 pir:C81552; isoleucyl-tRNA synthetase CP0665 [imported] -; E=0.0 swissprot:Q9Z972; SYI_CHLPN ISOLEUCYL-TRNA SYNTHETASE; E=0.0 COG: CPn0109; COG0060 Isoleucyl-tRNA synthetase; E=0.0 PFAM: PF00133; tRNA synthetases class I (I, L, M; E=1.8e-132; isoleucyl-tRNA synthetase 3859514 ileS 1791528 ileS Rhodopirellula baltica SH 1 isoleucyl-tRNA synthetase NP_867726.1 3855873 D 243090 CDS NP_867727.1 32474733 1790694 3859511..3860110 1 NC_005027.1 PMID: 95004650 best DB hits: BLAST: embl:CAA52779.2; (X74767) phosphoribosylglycinamide; E=1e-25 swissprot:P52422; PUR3_ARATH PHOSPHORIBOSYLGLYCINAMIDE; E=1e-25 pir:T11574; phosphoribosylglycinamide formyltransferase (EC 2.1.2.2); E=2e-25 COG: aq_857; COG0299 Folate-dependent phosphoribosylglycinamide; E=1e-23 VC1992; COG0788 Formyltetrahydrofolate hydrolase; E=9e-12 Cj0187c; COG0299 Folate-dependent phosphoribosylglycinamide; E=4e-11 PFAM: PF00551; Formyl transferase; E=2.9e-41; phosphoribosylglycinamide formyltransferase 3860110 pur3 1790694 pur3 Rhodopirellula baltica SH 1 phosphoribosylglycinamide formyltransferase NP_867727.1 3859511 D 243090 CDS NP_867728.1 32474734 1792328 3860241..3860393 1 NC_005027.1 hypothetical protein 3860393 1792328 RB7262 Rhodopirellula baltica SH 1 hypothetical protein NP_867728.1 3860241 D 243090 CDS NP_867729.1 32474735 1795287 3860323..3862392 1 NC_005027.1 PMID: 98196666 best DB hits: BLAST: pir:D70370; hypothetical protein aq_808 - Aquifex aeolicus -----; E=1e-05 PFAM: PF00430; ATP synthase B/B' CF(0); E=0.87; hypothetical protein 3862392 1795287 RB7263 Rhodopirellula baltica SH 1 hypothetical protein NP_867729.1 3860323 D 243090 CDS NP_867730.1 32474736 1796191 3862389..3864095 1 NC_005027.1 signal peptide 3864095 1796191 RB7267 Rhodopirellula baltica SH 1 signal peptide NP_867730.1 3862389 D 243090 CDS NP_867731.1 32474737 1793777 complement(3864352..3864549) 1 NC_005027.1 signal peptide 3864549 1793777 RB7271 Rhodopirellula baltica SH 1 signal peptide NP_867731.1 3864352 R 243090 CDS NP_867732.1 32474738 1791435 3864417..3864770 1 NC_005027.1 hypothetical protein 3864770 1791435 RB7273 Rhodopirellula baltica SH 1 hypothetical protein NP_867732.1 3864417 D 243090 CDS NP_867733.1 32474739 1792137 3864816..3866180 1 NC_005027.1 catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde; diaminobutyrate--2-oxoglutarate aminotransferase 3866180 ectB 1792137 ectB Rhodopirellula baltica SH 1 diaminobutyrate--2-oxoglutarate aminotransferase NP_867733.1 3864816 D 243090 CDS NP_867734.1 32474740 1792236 3866177..3868927 1 NC_005027.1 PMID: 20392447 best DB hits: BLAST: embl:CAC01604.1; (AJ269505) peptide synthetase [Anabaena sp. 90]; E=4e-91 embl:CAC11137.1; (AJ250581) NikP1 protein [Streptomyces tendae]; E=9e-91 gb:AAF17281.1; (AF204805) NosD [Nostoc sp. GSV224]; E=4e-89 COG: PA2424_3; COG1020 Non-ribosomal peptide synthetase modules and related; E=9e-85 BS_ppsC_1; COG1020 Non-ribosomal peptide synthetase modules and; E=5e-83 BS_dhbF; COG1020 Non-ribosomal peptide synthetase modules and related; E=2e-81 PFAM: PF00501; AMP-binding enzyme; E=2.2e-131 PF00550; Phosphopantetheine attachment; E=3.1e-21 PF00561; alpha/beta hydrolase fold; E=0.22; peptide synthetase 3868927 1792236 RB7276 Rhodopirellula baltica SH 1 peptide synthetase NP_867734.1 3866177 D 243090 CDS NP_867735.1 32474741 1795184 3868924..3869907 1 NC_005027.1 best DB hits: BLAST: pir:T45719; hypothetical protein F1P2.140 - Arabidopsis thaliana; E=0.014 pir:G82643; conserved hypothetical protein XF1745 [imported] -; E=0.023 pir:T45716; hypothetical protein F1P2.110 - Arabidopsis thaliana; E=0.072 COG: XF1745; COG1073 Hydrolases of the alpha/beta superfamily; E=0.002; hypothetical protein 3869907 1795184 RB7277 Rhodopirellula baltica SH 1 hypothetical protein NP_867735.1 3868924 D 243090 CDS NP_867736.1 32474742 1791323 3870019..3870309 1 NC_005027.1 hypothetical protein 3870309 1791323 RB7279 Rhodopirellula baltica SH 1 hypothetical protein NP_867736.1 3870019 D 243090 CDS NP_867737.1 32474743 1793806 3870457..3870762 1 NC_005027.1 hypothetical protein 3870762 1793806 RB7280 Rhodopirellula baltica SH 1 hypothetical protein NP_867737.1 3870457 D 243090 CDS NP_867738.1 32474744 1796448 3870834..3871508 1 NC_005027.1 signal peptide 3871508 1796448 RB7283 Rhodopirellula baltica SH 1 signal peptide NP_867738.1 3870834 D 243090 CDS NP_867739.1 32474745 1794506 3871505..3871639 1 NC_005027.1 hypothetical protein 3871639 1794506 RB7284 Rhodopirellula baltica SH 1 hypothetical protein NP_867739.1 3871505 D 243090 CDS NP_867740.1 32474746 1795590 3871636..3872637 1 NC_005027.1 PMID: 20365717 PMID: 10910347 best DB hits: BLAST: pir:E82847; lipid A biosynthesis lauroyl acyltransferase XF0104; E=8e-07 pir:A81318; probable lipid A biosynthesis lauroyl acyltransferase; E=2e-06 gb:AAG43974.1; AF215659_2 (AF215659) acyltransferase; E=1e-05 COG: XF0104; COG1560 Lauroyl/myristoyl acyltransferase involved in lipid; E=8e-08 RP718; COG1560 Lauroyl/myristoyl acyltransferase involved in lipid A; E=4e-04 CPn0098; COG1560 Lauroyl/myristoyl acyltransferase involved in lipid; E=0.005; lipid A biosynthesis lauroyl acyltransferase 3872637 htrB 1795590 htrB Rhodopirellula baltica SH 1 lipid A biosynthesis lauroyl acyltransferase NP_867740.1 3871636 D 243090 CDS NP_867741.1 32474747 1791546 complement(3872677..3873726) 1 NC_005027.1 PMID: 11214968 best DB hits: BLAST: pir:C72369; hypothetical protein TM0484 - Thermotoga maritima; E=6e-08 ddbj:BAB06401.1; (AP001516) thiamine biosynthesis [Bacillus; E=0.009 pir:H72008; ABC transporter permease - Chlamydophila pneumoniae; E=0.42 COG: TM0484; COG0715 ABC-type nitrate/sulfonate/taurine/bicarbonate; E=6e-09; ABC transporter permease 3873726 1791546 RB7287 Rhodopirellula baltica SH 1 ABC transporter permease NP_867741.1 3872677 R 243090 CDS NP_867742.1 32474748 1791985 complement(3873723..3874538) 1 NC_005027.1 best DB hits: BLAST: gb:AAK03349.1; (AE006165) unknown [Pasteurella multocida]; E=1e-19 pir:F83207; probable permease of ABC transporter PA3512 [imported] -; E=2e-19 ddbj:BAB06400.1; (AP001516) ABC transporter (permease) [Bacillus; E=6e-19 COG: PA3512; COG0600 ABC-type nitrate/sulfonate/taurine/bicarbonate; E=2e-20 PA5095; COG1174 ABC-type proline/glycine betaine transport systems,; E=1e-09 CT854_1; COG0600 ABC-type nitrate/sulfonate/taurine/bicarbonate; E=2e-09 PFAM: PF00528; Binding-protein-dependent transpor; E=0.003; ABC transporter permease 3874538 1791985 RB7288 Rhodopirellula baltica SH 1 ABC transporter permease NP_867742.1 3873723 R 243090 CDS NP_867743.1 32474749 1793257 complement(3874535..3875434) 1 NC_005027.1 PMID: 90264334 PMID: 2188958 best DB hits: BLAST: swissprot:P16676; CYSA_ECOLI SULFATE TRANSPORT ATP-BINDING PROTEIN; E=2e-33 gb:AAG57540.1; AE005472_7 (AE005472) ATP-binding component of; E=2e-33 ddbj:BAA21795.1; (AB000100) malK-like protein [Synechococcus sp.]; E=7e-33 COG: cysA; COG1118 ABC-type sulfate/molybdate transport systems, ATPase; E=1e-34 NMB0879; COG1118 ABC-type sulfate/molybdate transport systems,; E=6e-33 VC0541; COG1118 ABC-type sulfate/molybdate transport systems, ATPase; E=8e-33 PFAM: PF00071; Ras family; E=0.11 PF00004; ATPase associated with var; E=0.012 PF00005; ABC transporter; E=4.2e-47; sulfate ABC transport ATP-binding protein 3875434 cysA 1793257 cysA Rhodopirellula baltica SH 1 sulfate ABC transport ATP-binding protein NP_867743.1 3874535 R 243090 CDS NP_867744.1 32474750 1792823 complement(3875447..3875566) 1 NC_005027.1 hypothetical protein 3875566 1792823 RB7290 Rhodopirellula baltica SH 1 hypothetical protein NP_867744.1 3875447 R 243090 CDS NP_867745.1 32474751 1791304 3875577..3876347 1 NC_005027.1 PMID: 98332770 best DB hits: BLAST: pir:A71318; conserved hypothetical protein TP0489 - syphilis; E=9e-05 gb:AAB90300.1; (AE001039) conserved hypothetical protein; E=1e-04 pir:S74614; hypothetical protein sll1036 - Synechocystis sp. (strain; E=0.001 COG: TP0489; COG1235 Metal-dependent hydrolases of the beta-lactamase; E=8e-06 AF0939; COG1234 Metal-dependent hydrolases of the beta-lactamase; E=1e-05 sll1036; COG1235 Metal-dependent hydrolases of the beta-lactamase; E=1e-04; hypothetical protein 3876347 1791304 RB7292 Rhodopirellula baltica SH 1 hypothetical protein NP_867745.1 3875577 D 243090 CDS NP_867746.1 32474752 1793500 complement(3876391..3877239) 1 NC_005027.1 PMID: 20479972 best DB hits: BLAST: embl:CAC11337.1; (AL445063) probable glucose 1-dehydrogenase; E=5e-28 ddbj:BAB20935.2; (D85817) ORF [Staphylococcus aureus]; E=2e-27 ddbj:BAB06210.1; (AP001515) 3-oxoacyl-(acyl-carrier protein); E=2e-27 COG: Ta0191; COG1028 Dehydrogenases with different specificities (related; E=5e-29 BS_ycdF; COG1028 Dehydrogenases with different specificities; E=3e-27 yohF; COG1028 Dehydrogenases with different specificities (related; E=5e-26 PFAM: PF02882; Tetrahydrofolate dehydrogenase/; E=0.28 PF00106; short chain dehydrogenase; E=2.2e-53 PF00678; Short chain dehydrogenase/reduc; E=8.9e-10; glucose 1-dehydrogenase 3877239 gdh 1793500 gdh Rhodopirellula baltica SH 1 glucose 1-dehydrogenase NP_867746.1 3876391 R 243090 CDS NP_867747.1 32474753 1796116 3877224..3877472 1 NC_005027.1 hypothetical protein 3877472 1796116 RB7296 Rhodopirellula baltica SH 1 hypothetical protein NP_867747.1 3877224 D 243090 CDS NP_867748.1 32474754 1791754 3877465..3878073 1 NC_005027.1 PMID: 20406833 best DB hits: BLAST: pir:D82096; hypothetical protein VC2280 [imported] - Vibrio cholerae; E=1e-25 pir:C82997; hypothetical protein PA5196 [imported] - Pseudomonas; E=6e-13 pir:B82234; hypothetical protein VC1162 [imported] - Vibrio cholerae; E=3e-07; hypothetical protein 3878073 1791754 RB7297 Rhodopirellula baltica SH 1 hypothetical protein NP_867748.1 3877465 D 243090 CDS NP_867749.1 32474755 1796419 complement(3878094..3878213) 1 NC_005027.1 hypothetical protein 3878213 1796419 RB7298 Rhodopirellula baltica SH 1 hypothetical protein NP_867749.1 3878094 R 243090 CDS NP_867750.1 32474756 1791140 3878200..3879417 1 NC_005027.1 PMID: 20437337 best DB hits: BLAST: pir:D82997; ribosomal protein S6 modification protein PA5197; E=3e-76 pir:E82096; ribosomal protein S6 modification protein VC2281; E=2e-74 swissprot:P17116; RIMK_ECOLI RIBOSOMAL PROTEIN S6 MODIFICATION; E=1e-60 COG: PA5197; COG0189 Glutathione synthase/Ribosomal protein S6; E=3e-77 rimK; COG0189 Glutathione synthase/Ribosomal protein S6 modification; E=1e-61 HI1531; COG0189 Glutathione synthase/Ribosomal protein S6; E=2e-50 PFAM: PF02080; Potassium channel; E=3.8e-10; ribosomal protein S6 modification protein 3879417 rimK 1791140 rimK Rhodopirellula baltica SH 1 ribosomal protein S6 modification protein NP_867750.1 3878200 D 243090 CDS NP_867751.1 32474757 1795126 complement(3879390..3880487) 1 NC_005027.1 PMID: 9268317 best DB hits: BLAST: pir:E83274; tetraacyldisaccharide 4*-kinase PA2981 [imported] -; E=4e-25 pir:C82146; probable tetraacyldisaccharide 4'-kinase (EC 2.7.1.130); E=2e-23 pir:C70443; conserved hypothetical protein aq_1656 - Aquifex; E=2e-22 COG: PA2981; COG1663 Lipid A biosynthesis protein LpxK,; E=3e-26 sll0572; COG2403 Uncharacterized ACR; E=0.002 PFAM: PF02606; Tetraacyldisaccharide-1-P 4'-kinase; E=1.6e-13; tetraacyldisaccharide 4-kinase 3880487 lpxK 1795126 lpxK Rhodopirellula baltica SH 1 tetraacyldisaccharide 4-kinase NP_867751.1 3879390 R 243090 CDS NP_867752.1 32474758 1792323 complement(3880484..3883120) 1 NC_005027.1 PMID: 97000351 best DB hits: BLAST: embl:CAB88936.1; (AL353863) helicase [Streptomyces; E=3e-43 swissprot:Q10701; HELY_MYCTU HELICASE HELY ----- pir:; E=5e-43 embl:CAA22943.1; (AL035310) helicase [Mycobacterium; E=2e-41 COG: Rv2092c; COG0513 Superfamily II DNA and RNA helicases; E=5e-44 Ta0835; COG1204 Predicted helicases; E=9e-28 YLR398c; COG0513 Superfamily II DNA and RNA helicases; E=4e-26 PFAM: PF00004; ATPase associated with vari; E=0.0005 PF01695; IstB-like ATP binding protein; E=0.0061 PF00270; DEAD/DEAH box helicase; E=1.2e-29; helicase 3883120 1792323 RB7301 Rhodopirellula baltica SH 1 helicase NP_867752.1 3880484 R 243090 CDS NP_867753.1 32474759 1791995 3883041..3883526 1 NC_005027.1 hypothetical protein 3883526 1791995 RB7303 Rhodopirellula baltica SH 1 hypothetical protein NP_867753.1 3883041 D 243090 CDS NP_867754.1 32474760 1790794 3883565..3884809 1 NC_005027.1 PMID: 97404404 best DB hits: BLAST: pir:T03460; probable leucineisoleucine/valine-binding protein; E=1e-36 pir:H75444; branched-chain amino acid ABC transporter, periplasmic; E=4e-04 pir:G75579; branched-chain amino acid ABC transporter, periplasmic; E=9e-04 COG: DR1038; COG0683 Periplasmic leucine/isoleucine/valine-binding; E=4e-05; leucine/isoleucine/valine-binding protein precursor 3884809 livK 1790794 livK Rhodopirellula baltica SH 1 leucine/isoleucine/valine-binding protein precursor NP_867754.1 3883565 D 243090 CDS NP_867755.1 32474761 1793106 3884802..3887642 1 NC_005027.1 PMID: 20406833 best DB hits: BLAST: pir:H83285; probable two-component sensor PA2882 [imported] -; E=2e-36 pir:F83324; probable two-component sensor PA2571 [imported] -; E=3e-36 pir:D82244; sensory box sensor histidine kinase VC1084 [imported] -; E=7e-34 COG: PA2882; COG0642 Sensory transduction histidine kinases; E=2e-37 PFAM: PF00785; PAC motif; E=5.1e-05 PF00512; His Kinase A (phosphoacceptor); E=0.0012 PF02518; Histidine kinase-, DNA gyrase B; E=5.2e-32; sensory box sensor histidine kinase 3887642 1793106 RB7308 Rhodopirellula baltica SH 1 sensory box sensor histidine kinase NP_867755.1 3884802 D 243090 CDS NP_867756.1 32474762 1793728 complement(3887699..3891646) 1 NC_005027.1 hypothetical protein 3891646 1793728 RB7309 Rhodopirellula baltica SH 1 hypothetical protein NP_867756.1 3887699 R 243090 CDS NP_867757.1 32474763 1791807 complement(3891704..3891868) 1 NC_005027.1 hypothetical protein 3891868 1791807 RB7312 Rhodopirellula baltica SH 1 hypothetical protein NP_867757.1 3891704 R 243090 CDS NP_867758.1 32474764 1795766 complement(3891942..3892097) 1 NC_005027.1 hypothetical protein 3892097 1795766 RB7313 Rhodopirellula baltica SH 1 hypothetical protein NP_867758.1 3891942 R 243090 CDS NP_867759.1 32474765 1796472 3892096..3893412 1 NC_005027.1 PMID: 97000351 PMID: 8843436 best DB hits: BLAST: embl:CAB66286.1; (AL136519) bifunctional carbohydrate binding and; E=2e-20 gb:AAK03409.1; (AE006170) unknown [Pasteurella multocida]; E=4e-20 pir:A72417; sugar ABC transporter, periplasmic sugar-binding protein; E=3e-19 COG: TM0114; COG1879 Periplasmic sugar-binding proteins; E=3e-20 PFAM: PF00532; Periplasmic binding proteins; E=0.038; bifunctional carbohydrate binding and transport protein 3893412 rbsB 1796472 rbsB Rhodopirellula baltica SH 1 bifunctional carbohydrate binding and transport protein NP_867759.1 3892096 D 243090 CDS NP_867760.1 32474766 1790270 3893409..3893522 1 NC_005027.1 hypothetical protein 3893522 1790270 RB7316 Rhodopirellula baltica SH 1 hypothetical protein NP_867760.1 3893409 D 243090 CDS NP_867761.1 32474767 1795329 3893519..3894877 1 NC_005027.1 PMID: 99411980 best DB hits: BLAST: ddbj:BAB06103.1; (AP001515) ATP-dependent RNA helicase [Bacillus; E=3e-85 pir:D69772; ATP-dependent RNA helicase homolog ydbR - Bacillus; E=2e-81 gb:AAD20136.1; (AF091502) autoaggregation-mediating protein; E=2e-79 COG: BH2384; COG0513 Superfamily II DNA and RNA helicases; E=3e-86 PFAM: PF00270; DEAD/DEAH box helicase; E=5.5e-71 PF00271; Helicase conserved C-terminal doma; E=1.5e-31; ATP-dependent RNA helicase 3894877 deaD 1795329 deaD Rhodopirellula baltica SH 1 ATP-dependent RNA helicase NP_867761.1 3893519 D 243090 CDS NP_867762.1 32474768 1795269 complement(3894884..3895264) 1 NC_005027.1 hypothetical protein 3895264 1795269 RB7318 Rhodopirellula baltica SH 1 hypothetical protein NP_867762.1 3894884 R 243090 CDS NP_867763.1 32474769 1793913 complement(3895261..3895491) 1 NC_005027.1 hypothetical protein 3895491 1793913 RB7319 Rhodopirellula baltica SH 1 hypothetical protein NP_867763.1 3895261 R 243090 CDS NP_867764.1 32474770 1793545 3895351..3913824 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB10333.1; (AB016872) gene_id:K21P3.2~unknown protein; E=0.089 PFAM: PF00028; Cadherin domain; E=0.14 PF00797; N-acetyltransferase; E=0.3 PF00404; Dockerin type I repeat; E=0.045; hypothetical protein 3913824 1793545 RB7321 Rhodopirellula baltica SH 1 hypothetical protein NP_867764.1 3895351 D 243090 CDS NP_867765.1 32474771 1792145 3913925..3936541 1 NC_005027.1 PMID: 93125117 PMID: 1479886 PMID: 7891560 best DB hits: BLAST: pir:S61441; surface-associated protein cshA precursor - Streptococcus; E=0.006 PFAM: PF00404; Dockerin type I repeat; E=0.039; surface-associated protein cshA precursor 3936541 1792145 RB7341 Rhodopirellula baltica SH 1 surface-associated protein cshA precursor NP_867765.1 3913925 D 243090 CDS NP_867766.1 32474772 1796185 3936698..3938002 1 NC_005027.1 PMID: 20437337 best DB hits: BLAST: pir:C83147; gamma-glutamyl phosphate reductase PA4007 [imported] -; E=8e-97 swissprot:O67166; PROA_AQUAE GAMMA-GLUTAMYL PHOSPHATE REDUCTASE; E=1e-96 gb:AAK05706.1; AE006391_5 (AE006391) gamma-glutamyl phosphate; E=4e-96 COG: PA4007; COG0014 Gamma-glutamyl phosphate reductase; E=8e-98 VC2033_1; COG1012 NAD-dependent aldehyde dehydrogenases; E=0.001 PFAM: PF00171; Aldehyde dehydrogenase; E=0.0046; gamma-glutamyl phosphate reductase 3938002 proA 1796185 proA Rhodopirellula baltica SH 1 gamma-glutamyl phosphate reductase NP_867766.1 3936698 D 243090 CDS NP_867767.1 32474773 1793056 3938010..3939296 1 NC_005027.1 PMID: 96345631 PMID: 8755894 best DB hits: BLAST: swissprot:P74927; FLIM_TREPA FLAGELLAR MOTOR SWITCH PROTEIN FLIM; E=7e-47 swissprot:Q57511; FLIM_BORBU FLAGELLAR MOTOR SWITCH PROTEIN FLIM; E=5e-46 ddbj:BAB06165.1; (AP001515) flagellar motor switch protein; E=3e-44 COG: TP0721; COG1868 Flagellar motor switch protein; E=7e-48 PFAM: PF02154; Flagellar motor switch protein FliM; E=1.3e-68 PF01052; Surface presentation of antigens (S; E=0.19; flagellar motor switch protein fliM 3939296 fliM 1793056 fliM Rhodopirellula baltica SH 1 flagellar motor switch protein fliM NP_867767.1 3938010 D 243090 CDS NP_867768.1 32474774 1791870 complement(3939365..3939496) 1 NC_005027.1 hypothetical protein 3939496 1791870 RB7361 Rhodopirellula baltica SH 1 hypothetical protein NP_867768.1 3939365 R 243090 CDS NP_867769.1 32474775 1791891 complement(3939501..3939758) 1 NC_005027.1 PMID: 99303335 best DB hits: BLAST: gb:AAD28578.1; AF121341_2 (AF121341) response regulator; E=0.69; response regulator CelR2 3939758 1791891 RB7362 Rhodopirellula baltica SH 1 response regulator CelR2 NP_867769.1 3939501 R 243090 CDS NP_867770.1 32474776 1792904 3939802..3940212 1 NC_005027.1 hypothetical protein 3940212 1792904 RB7363 Rhodopirellula baltica SH 1 hypothetical protein NP_867770.1 3939802 D 243090 CDS NP_867771.1 32474777 1795067 3940103..3941347 1 NC_005027.1 signal peptide 3941347 1795067 RB7364 Rhodopirellula baltica SH 1 signal peptide NP_867771.1 3940103 D 243090 CDS NP_867772.1 32474778 1793384 3941421..3943328 1 NC_005027.1 PMID: 99287316 best DB hits: BLAST: pir:F72359; periplasmic serine proteinase Do (EC 3.4.21.-) -; E=6e-26 pir:B81728; serine proteinase, HtrADegQ/DegS family TC0210; E=6e-25 swissprot:P18584; DEGP_CHLTR PROBABLE SERINE PROTEASE DO-LIKE; E=7e-25 COG: TM0571; COG0265 Trypsin-like serine proteases, typically; E=5e-27 CT823; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=6e-26 Cj1228c; COG0265 Trypsin-like serine proteases, typically; E=8e-26 PFAM: PF00089; Trypsin; E=1.7e-09 PF00595; PDZ domain (Also known as DHR or GLG; E=0.0017; periplasmic serine proteinase DO 3943328 degP 1793384 degP Rhodopirellula baltica SH 1 periplasmic serine proteinase DO NP_867772.1 3941421 D 243090 CDS NP_867773.1 32474779 1796672 3943271..3944404 1 NC_005027.1 PMID: 20150255 best DB hits: BLAST: pir:B81728; serine proteinase, HtrADegQ/DegS family TC0210; E=1e-16 swissprot:P18584; DEGP_CHLTR PROBABLE SERINE PROTEASE DO-LIKE; E=2e-16 swissprot:Q9Z6T0; DEGP_CHLPN PROBABLE SERINE PROTEASE DO-LIKE; E=1e-15 COG: CT823; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=2e-17 CPn0979; COG0265 Trypsin-like serine proteases, typically; E=1e-16 RP124; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=3e-08 PFAM: PF00595; PDZ domain (Also known as DHR or GL; E=1.4e-09; serine protease 3944404 degP 1796672 degP Rhodopirellula baltica SH 1 serine protease NP_867773.1 3943271 D 243090 CDS NP_867774.1 32474780 1796058 3944401..3946470 1 NC_005027.1 PMID: 21145866 best DB hits: BLAST: gb:AAK02818.1; (AE006110) HtrA [Pasteurella multocida]; E=4e-23 swissprot:P45129; HTOA_HAEIN PROBABLE PERIPLASMIC SERINE PROTEASE; E=1e-21 gb:AAC38202.1; (AF018151) HtrA [Haemophilus influenzae]; E=2e-21 COG: HI1259; COG0265 Trypsin-like serine proteases, typically; E=1e-22 htrA; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=2e-17 NMB0532; COG0265 Trypsin-like serine proteases, typically; E=2e-17 PFAM: PF00595; PDZ domain (Also known as DHR or GLG; E=8.4e-09; HtrA family serine protease 3946470 degP 1796058 degP Rhodopirellula baltica SH 1 HtrA family serine protease NP_867774.1 3944401 D 243090 CDS NP_867775.1 32474781 1791396 3946584..3947570 1 NC_005027.1 PMID: 12101309 best DB hits: BLAST: pir:S76547; hypothetical protein - Synechocystis sp. (strain PCC; E=0.020 pir:C71559; probable outer membrane leader peptide CT073 - Chlamydia; E=0.27 pir:A81713; conserved hypothetical protein TC0345 [imported] -; E=0.41; hypothetical protein 3947570 1791396 RB7374 Rhodopirellula baltica SH 1 hypothetical protein NP_867775.1 3946584 D 243090 CDS NP_867776.1 32474782 1796328 complement(3947593..3948831) 1 NC_005027.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 3948831 pepT 1796328 pepT Rhodopirellula baltica SH 1 peptidase T NP_867776.1 3947593 R 243090 CDS NP_867777.1 32474783 1791433 complement(3948828..3949460) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: gb:AAF12632.1; AE001826_101 (AE001826) hypothetical protein; E=0.29; hypothetical protein 3949460 1791433 RB7376 Rhodopirellula baltica SH 1 hypothetical protein NP_867777.1 3948828 R 243090 CDS NP_867778.1 32474784 1792230 complement(3949595..3950326) 1 NC_005027.1 hypothetical protein 3950326 1792230 RB7381 Rhodopirellula baltica SH 1 hypothetical protein NP_867778.1 3949595 R 243090 CDS NP_867779.1 32474785 1793001 complement(3950426..3951508) 1 NC_005027.1 PMID: 11214968; hypothetical protein 3951508 1793001 RB7382 Rhodopirellula baltica SH 1 hypothetical protein NP_867779.1 3950426 R 243090 CDS NP_867780.1 32474786 1795148 complement(3951505..3951717) 1 NC_005027.1 signal peptide 3951717 1795148 RB7383 Rhodopirellula baltica SH 1 signal peptide NP_867780.1 3951505 R 243090 CDS NP_867781.1 32474787 1793292 complement(3951653..3952438) 1 NC_005027.1 PMID: 98044033 best DB hits: BLAST: pir:E70007; sepiapterin reductase homolog yueD - Bacillus subtilis; E=2e-09 pir:B70407; alcohol dehydrogenase - Aquifex aeolicus ----- gb:; E=3e-09 gb:AAF48896.1; (AE003510) CG7322 gene product [Drosophila; E=5e-08 COG: BS_yueD; COG1028 Dehydrogenases with different specificities; E=2e-10 XF0145; COG0300 Short-chain dehydrogenases of various substrate; E=2e-07 YIR035c; COG1028 Dehydrogenases with different specificities; E=3e-07 PFAM: PF00106; short chain dehydrogenase; E=2.7e-12; sepiapterin reductase 3952438 sprE 1793292 sprE Rhodopirellula baltica SH 1 sepiapterin reductase NP_867781.1 3951653 R 243090 CDS NP_867782.1 32474788 1793204 complement(3952464..3952583) 1 NC_005027.1 hypothetical protein 3952583 1793204 RB7386 Rhodopirellula baltica SH 1 hypothetical protein NP_867782.1 3952464 R 243090 CDS NP_867783.1 32474789 1793567 3952745..3953593 1 NC_005027.1 PMID: 9163424 best DB hits: BLAST: swissprot:P55632; Y4QK_RHISN INTEGRASERECOMBINASE Y4QK; E=7e-25 swissprot:P55429; Y4EF_RHISN INTEGRASERECOMBINASE Y4EF; E=5e-24 prf:2115270D; integrase [Weeksella zoohelcum]; E=4e-18 COG: PAB0255; COG0582 Integrase; E=1e-15 PFAM: PF00589; Phage integrase; E=2.6e-19; integrase/recombinase y4qk 3953593 y4qJ 1793567 y4qJ Rhodopirellula baltica SH 1 integrase/recombinase y4qk NP_867783.1 3952745 D 243090 CDS NP_867784.1 32474790 1794008 3953590..3954717 1 NC_005027.1 PMID: 9163424 best DB hits: BLAST: swissprot:P55631; Y4QJ_RHISN TRANSPOSASE Y4QJ -----; E=7e-39 prf:2115270C; transposase [Weeksella zoohelcum]; E=6e-35 pir:S23782; transposase tnpA (insertion sequence IS91) - Escherichia; E=5e-14; transposase y4qj 3954717 y4qJ 1794008 y4qJ Rhodopirellula baltica SH 1 transposase y4qj NP_867784.1 3953590 D 243090 CDS NP_867785.1 32474791 1790636 3954342..3954968 1 NC_005027.1 hypothetical protein 3954968 1790636 RB7390 Rhodopirellula baltica SH 1 hypothetical protein NP_867785.1 3954342 D 243090 CDS NP_867786.1 32474792 1794170 complement(3955080..3955364) 1 NC_005027.1 hypothetical protein 3955364 1794170 RB7392 Rhodopirellula baltica SH 1 hypothetical protein NP_867786.1 3955080 R 243090 CDS NP_867787.1 32474793 1792784 3955353..3955553 1 NC_005027.1 hypothetical protein 3955553 1792784 RB7393 Rhodopirellula baltica SH 1 hypothetical protein NP_867787.1 3955353 D 243090 CDS NP_867788.1 32474794 1793890 complement(3955527..3955937) 1 NC_005027.1 hypothetical protein 3955937 1793890 RB7394 Rhodopirellula baltica SH 1 hypothetical protein NP_867788.1 3955527 R 243090 CDS NP_867789.1 32474795 1793591 3955956..3956351 1 NC_005027.1 best DB hits: BLAST: swissprot:P08047; SP1_HUMAN TRANSCRIPTION FACTOR SP1 -----; E=0.76; transcription factor SP1 3956351 1793591 RB7395 Rhodopirellula baltica SH 1 transcription factor SP1 NP_867789.1 3955956 D 243090 CDS NP_867790.1 32474796 1795408 complement(3956438..3956551) 1 NC_005027.1 hypothetical protein 3956551 1795408 RB7397 Rhodopirellula baltica SH 1 hypothetical protein NP_867790.1 3956438 R 243090 CDS NP_867791.1 32474797 1791009 complement(3956615..3957253) 1 NC_005027.1 best DB hits: PFAM: PF00903; Glyoxalase/Bleomycin resistance pr; E=0.0062; hypothetical protein 3957253 1791009 RB7398 Rhodopirellula baltica SH 1 hypothetical protein NP_867791.1 3956615 R 243090 CDS NP_867792.1 32474798 1791585 complement(3957300..3958685) 1 NC_005027.1 PMID: 97305956 PMID: 9163424 best DB hits: BLAST: swissprot:P55632; Y4QK_RHISN INTEGRASERECOMBINASE Y4QK; E=6e-37 prf:2115270D; integrase [Weeksella zoohelcum]; E=1e-35 swissprot:P55429; Y4EF_RHISN INTEGRASERECOMBINASE Y4EF; E=2e-33 COG: MTH893; COG0582 Integrase; E=1e-31 PFAM: PF02899; Phage integrase, N-terminal S; E=0.0062 PF00589; Phage integrase; E=4.2e-40; integrase/recombinase Y4QK 3958685 y4qK 1791585 y4qK Rhodopirellula baltica SH 1 integrase/recombinase Y4QK NP_867792.1 3957300 R 243090 CDS NP_867793.1 32474799 1794668 3958756..3959001 1 NC_005027.1 hypothetical protein 3959001 1794668 RB7401 Rhodopirellula baltica SH 1 hypothetical protein NP_867793.1 3958756 D 243090 CDS NP_867794.1 32474800 1797166 3959074..3959751 1 NC_005027.1 hypothetical protein 3959751 1797166 RB7402 Rhodopirellula baltica SH 1 hypothetical protein NP_867794.1 3959074 D 243090 CDS NP_867795.1 32474801 1792849 complement(3959805..3960737) 1 NC_005027.1 PMID: 98416126 best DB hits: BLAST: pir:T44684; hypothetical protein Cbi [imported] - Bacillus; E=6e-22 ddbj:BAB05215.1; (AP001512) BH1496~unknown conserved protein; E=2e-19 pir:S75947; hypothetical protein - Synechocystis sp. (strain PCC; E=3e-19 COG: BH1496; COG2138 Uncharacterized ACR; E=2e-20; hypothetical protein 3960737 1792849 RB7404 Rhodopirellula baltica SH 1 hypothetical protein NP_867795.1 3959805 R 243090 CDS NP_867796.1 32474802 1790535 complement(3960764..3961156) 1 NC_005027.1 signal peptide 3961156 1790535 RB7406 Rhodopirellula baltica SH 1 signal peptide NP_867796.1 3960764 R 243090 CDS NP_867797.1 32474803 1795722 complement(3961365..3962852) 1 NC_005027.1 PMID: 98196666 best DB hits: BLAST: pir:F70369; carboxyl-terminal proteinase - Aquifex aeolicus -----; E=4e-49 swissprot:Q44879; CTPA_BARBA CARBOXY-TERMINAL PROCESSING PROTEASE; E=7e-49 pir:B83005; probable carboxyl-terminal proteinase PA5134 [imported]; E=7e-47 COG: aq_797; COG0793 Periplasmic protease; E=3e-50 PFAM: PF00595; PDZ domain (Also known as DHR or GLG; E=0.0011; carboxyl-terminal proteinase 3962852 ctpA 1795722 ctpA Rhodopirellula baltica SH 1 carboxyl-terminal proteinase NP_867797.1 3961365 R 243090 CDS NP_867798.1 32474804 1792800 complement(3962837..3963070) 1 NC_005027.1 hypothetical protein 3963070 1792800 RB7409 Rhodopirellula baltica SH 1 hypothetical protein NP_867798.1 3962837 R 243090 CDS NP_867799.1 32474805 1790403 complement(3963019..3964356) 1 NC_005027.1 best DB hits: BLAST: embl:CAB37946.1; (AJ133131) histidine kinase (PhoR1); E=2e-43 swissprot:P35164; RESE_BACSU SENSOR PROTEIN RESE ----- pir:; E=7e-40 embl:CAB64973.1; (AJ012050) VicK protein [Enterococcus faecalis]; E=1e-38 COG: BH4026; COG0642 Sensory transduction histidine kinases; E=2e-39 PFAM: PF00989; PAS domain; E=0.0015 PF00512; His Kinase A (phosphoacceptor) doma; E=9.2e-20 PF02518; Histidine kinase-, DNA gyrase B-, p; E=7.3e-38; histidine kinase (PhoR1) 3964356 1790403 RB7410 Rhodopirellula baltica SH 1 histidine kinase (PhoR1) NP_867799.1 3963019 R 243090 CDS NP_867800.1 32474806 1796468 complement(3964353..3964529) 1 NC_005027.1 hypothetical protein 3964529 1796468 RB7411 Rhodopirellula baltica SH 1 hypothetical protein NP_867800.1 3964353 R 243090 CDS NP_867801.1 32474807 1790961 3964518..3964904 1 NC_005027.1 hypothetical protein 3964904 1790961 RB7412 Rhodopirellula baltica SH 1 hypothetical protein NP_867801.1 3964518 D 243090 CDS NP_867802.1 32474808 1797216 complement(3964937..3965263) 1 NC_005027.1 hypothetical protein 3965263 1797216 RB7414 Rhodopirellula baltica SH 1 hypothetical protein NP_867802.1 3964937 R 243090 CDS NP_867803.1 32474809 1792284 3965167..3969372 1 NC_005027.1 hypothetical protein 3969372 1792284 RB7415 Rhodopirellula baltica SH 1 hypothetical protein NP_867803.1 3965167 D 243090 CDS NP_867804.1 32474810 1796201 3969369..3979892 1 NC_005027.1 best DB hits: PFAM: PF01433; Peptidase M1; E=0.23 PF01542; Hepatitis C virus core protei; E=0.54 PF00034; Cytochrome c; E=0.002; hypothetical protein 3979892 1796201 RB7418 Rhodopirellula baltica SH 1 hypothetical protein NP_867804.1 3969369 D 243090 CDS NP_867805.1 32474811 1794098 3979889..3981148 1 NC_005027.1 PMID: 99411980 best DB hits: BLAST: pir:G69051; nifS protein - Methanobacterium thermoautotrophicum; E=8e-37 ddbj:BAB07775.1; (AP001520) aminotransferase required for NAD; E=1e-34 pir:F70019; nifS protein homolog yurW - Bacillus subtilis -----; E=4e-27 COG: MTH1389; COG0520 Selenocysteine lyase; E=8e-38 aq_739; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; E=1e-20 BH3469; COG0520 Selenocysteine lyase; E=5e-20 PFAM: PF00266; Aminotransferase class-V; E=1.4e-19; aminotransferase NifS- NifS-like protein 3981148 nifS 1794098 nifS Rhodopirellula baltica SH 1 aminotransferase NifS- NifS-like protein NP_867805.1 3979889 D 243090 CDS NP_867806.1 32474812 1791472 3981262..3982491 1 NC_005027.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 3982491 nadA 1791472 nadA Rhodopirellula baltica SH 1 quinolinate synthetase NP_867806.1 3981262 D 243090 CDS NP_867807.1 32474813 1790429 3982578..3982964 1 NC_005027.1 PMID: 7542800 best DB hits: BLAST: swissprot:P45019; YGDD_HAEIN HYPOTHETICAL PROTEIN HI1073 -----; E=6e-10 pir:C83599; conserved hypothetical protein PA0379 [imported] -; E=2e-09 embl:CAB63338.1; (AL032631) Y106G6H.8 [Caenorhabditis elegans]; E=3e-09 COG: HI1073; COG2363 Uncharacterized small membrane protein; E=6e-11; hypothetical protein 3982964 1790429 RB7428 Rhodopirellula baltica SH 1 hypothetical protein NP_867807.1 3982578 D 243090 CDS NP_867808.1 32474814 1794870 3982983..3984014 1 NC_005027.1 PMID: 97000351 best DB hits: BLAST: embl:CAB93367.1; (AL357523) aspartate carbamoyltransferase; E=4e-67 swissprot:P74163; PYRB_SYNY3 ASPARTATE CARBAMOYLTRANSFERASE; E=6e-64 swissprot:Q59711; PYRB_PSEPU ASPARTATE CARBAMOYLTRANSFERASE; E=5e-63 COG: slr1476; COG0540 Aspartate carbamoyltransferase, catalytic chain; E=6e-65 PFAM: PF02729; Aspartate/ornithine carbamoylt; E=1.1e-44 PF01229; Glycosyl hydrolases family 39; E=0.23 PF00185; Aspartate/ornithine carbamoylt; E=7.1e-18; aspartate carbamoyltransferase 3984014 pyrB 1794870 pyrB Rhodopirellula baltica SH 1 aspartate carbamoyltransferase NP_867808.1 3982983 D 243090 CDS NP_867809.1 32474815 1792269 3983957..3985327 1 NC_005027.1 PMID: 97000351 PMID: 7516791 best DB hits: BLAST: embl:CAB93366.1; (AL357523) dihydroorotase [Streptomyces; E=2e-61 swissprot:P71809; PYRC_MYCTU DIHYDROOROTASE (DHOASE) -----; E=2e-54 swissprot:Q59712; PYRX_PSEPU DIHYDROOROTASE-LIKE PROTEIN; E=5e-54 COG: Rv1381; COG0044 Dihydroorotase; E=2e-55 PFAM: PF00744; Dihydroorotase-like; E=5.8e-12 PF02612; N-acetylglucosamine-6-phosphat; E=0.25 PF00744; Dihydroorotase-like; E=1.5e-33; dihydroorotase 3985327 pyrC 1792269 pyrC Rhodopirellula baltica SH 1 dihydroorotase NP_867809.1 3983957 D 243090 CDS NP_867810.1 32474816 1792417 3985327..3985767 1 NC_005027.1 PMID: 9628904 PMID: 99356711 PMID: 10427704 PMID: 20512582 PMID: 11058132 best DB hits: BLAST: swissprot:Q9RCA4; RNPA_BACHD RIBONUCLEASE P PROTEIN COMPONENT; E=3e-07 swissprot:Q9Z6X2; RNPA_CHLPN RIBONUCLEASE P PROTEIN COMPONENT; E=3e-06 pir:JQ1214; ribonuclease P (EC 3.1.26.5) protein component rnpA -; E=5e-06 COG: BH4065; COG0594 RNase P protein component; E=3e-08 PFAM: PF00825; Ribonuclease P; E=2.6e-21; ribonuclease P protein component 3985767 rnpA 1792417 rnpA Rhodopirellula baltica SH 1 ribonuclease P protein component NP_867810.1 3985327 D 243090 CDS NP_867811.1 32474817 1792272 complement(3985750..3986793) 1 NC_005027.1 best DB hits: BLAST: pir:F82509; conserved hypothetical protein VCA0040 [imported] -; E=6e-37 pir:H69160; hypothetical protein MTH465 - Methanobacterium; E=5e-26 gb:AAG19472.1; (AE005039) Vng1069c [Halobacterium sp. NRC-1]; E=2e-19 COG: VCA0040; COG2035 Predicted membrane protein; E=6e-38; hypothetical protein 3986793 1792272 RB7433 Rhodopirellula baltica SH 1 hypothetical protein NP_867811.1 3985750 R 243090 CDS NP_867812.1 32474818 1794626 3986759..3986899 1 NC_005027.1 hypothetical protein 3986899 1794626 RB7434 Rhodopirellula baltica SH 1 hypothetical protein NP_867812.1 3986759 D 243090 CDS NP_867813.1 32474819 1791742 3986915..3987688 1 NC_005027.1 PMID: 8389741 best DB hits: BLAST: gb:AAG03365.1; (AF024666) BacA [Corynebacterium striatum]; E=2e-26 gb:AAG58191.1; AE005535_3 (AE005535) bacitracin resistance; E=7e-26 swissprot:P31054; BACA_ECOLI BACITRACIN RESISTANCE PROTEIN; E=8e-26 COG: bacA; COG1968 Uncharacterized ACR, bacitracin resistance protein; E=7e-27 MTH1429; COG1968 Uncharacterized ACR, bacitracin resistance; E=2e-06 PFAM: PF02673; Bacitracin resistance protein BacA; E=0.005; bacitracin resistance protein (BacA) 3987688 bacA 1791742 bacA Rhodopirellula baltica SH 1 bacitracin resistance protein (BacA) NP_867813.1 3986915 D 243090 CDS NP_867814.1 32474820 1793041 3987953..3988672 1 NC_005027.1 PMID: 1657879 PMID: 8969214 PMID: 9555905 best DB hits: BLAST: embl:CAA12169.1; (AJ224870) LexA protein [Streptomyces; E=2e-17 swissprot:P31080; LEXA_BACSU LEXA REPRESSOR (SOS REGULATORY; E=8e-17 pir:T35123; SOS response regulator lexA - Streptomyces coelicolor; E=1e-16 COG: BS_lexA; COG1974 SOS-response transcriptional repressors; E=8e-18 lexA; COG1974 SOS-response transcriptional repressors (RecA-mediated; E=2e-14 VC0092; COG1974 SOS-response transcriptional repressors; E=3e-13 PFAM: PF01726; LexA DNA binding domain; E=5.5e-33 PF00717; Peptidase S24; E=0.0016; LexA protein 3988672 lexA 1793041 lexA Rhodopirellula baltica SH 1 LexA protein NP_867814.1 3987953 D 243090 CDS NP_867815.1 32474821 1791913 complement(3988692..3990002) 1 NC_005027.1 best DB hits: PFAM: PF00461; Signal peptidase I; E=0.0034; signal peptidase 3990002 1791913 RB7439 Rhodopirellula baltica SH 1 signal peptidase NP_867815.1 3988692 R 243090 CDS NP_867816.1 32474822 1791960 3990113..3990535 1 NC_005027.1 best DB hits: BLAST: gb:AAF18102.1; AF204400_2 (AF204400) FrgB [Myxococcus xanthus]; E=0.13 ddbj:BAB07745.1; (AP001520) two-component sensor histidine kinase; E=0.83 PFAM: PF02518; Histidine kinase-, DNA gyrase B; E=0.00025; two-component sensor histidine kinase 3990535 1791960 RB7440 Rhodopirellula baltica SH 1 two-component sensor histidine kinase NP_867816.1 3990113 D 243090 CDS NP_867817.1 32474823 1790633 3990532..3991098 1 NC_005027.1 PMID: 20437337 PMID: 1905667 best DB hits: BLAST: pir:C83510; flagellar basal-body rod protein FlgB PA1077; E=0.002 gb:AAD19729.1; (AF124349) flagellar basal-body rod protein; E=0.020 gb:AAF14367.1; AF133240_1 (AF133240) flagellar proximal rod; E=0.034 COG: PA1077; COG1815 Flagellar basal body protein; E=1e-04; flagellar basal-body rod protein FlgB 3991098 flgB 1790633 flgB Rhodopirellula baltica SH 1 flagellar basal-body rod protein FlgB NP_867817.1 3990532 D 243090 CDS NP_867818.1 32474824 1795014 3991134..3991565 1 NC_005027.1 PMID: 2129540 PMID: 2404955 PMID: 11677608 best DB hits: BLAST: swissprot:Q57466; FLGC_BORBU FLAGELLAR BASAL-BODY ROD PROTEIN FLGC; E=2e-18 gb:AAC45656.1; (U82214) FlgC [Proteus mirabilis]; E=4e-18 swissprot:P16438; FLGC_SALTY FLAGELLAR BASAL-BODY ROD PROTEIN FLGC; E=1e-17 COG: BB0293; COG1558 Flagellar basal body rod protein; E=2e-19 PFAM: PF00460; Flagella basal body rod protein; E=0.001; flagellar basal body rod protein FlgC 3991565 flgC 1795014 flgC Rhodopirellula baltica SH 1 flagellar basal body rod protein FlgC NP_867818.1 3991134 D 243090 CDS NP_867819.1 32474825 1790479 3991601..3992020 1 NC_005027.1 PMID: 1905667 best DB hits: BLAST: pir:G72263; flagellar hook-basal body complex protein FliE -; E=7e-05 swissprot:O67242; FLIE_AQUAE FLAGELLAR HOOK-BASAL BODY COMPLEX; E=1e-04 pir:E64714; flagellar hook-basal body complex protein - Helicobacter; E=0.002 COG: TM1366; COG1677 Flagellar hook-basal body protein; E=7e-06 PFAM: PF02049; Flagellar hook-basal body complex pr; E=1.9e-12; flagellar hook-basal body complex protein FliE 3992020 fliE 1790479 fliE Rhodopirellula baltica SH 1 flagellar hook-basal body complex protein FliE NP_867819.1 3991601 D 243090 CDS NP_867820.1 32474826 1796859 3992031..3993668 1 NC_005027.1 PMID: 20115548 PMID: 10648530 best DB hits: BLAST: gb:AAD15920.1; (AF069392) polar flagellar M-ring protein FliF; E=6e-04 swissprot:Q53151; FLIF_RHOSH FLAGELLAR M-RING PROTEIN -----; E=0.001 swissprot:O67241; FLIF_AQUAE FLAGELLAR M-RING PROTEIN -----; E=0.002 COG: aq_1182; COG1766 Flagellar biosynthesis/type III secretory pathway; E=2e-04 PFAM: PF01514; Secretory protein of YscJ/FliF fa; E=0.00027; polar flagellar M-ring protein FliF 3993668 fliF 1796859 fliF Rhodopirellula baltica SH 1 polar flagellar M-ring protein FliF NP_867820.1 3992031 D 243090 CDS NP_867821.1 32474827 1797195 complement(3993693..3994460) 1 NC_005027.1 signal peptide 3994460 1797195 RB7446 Rhodopirellula baltica SH 1 signal peptide NP_867821.1 3993693 R 243090 CDS NP_867822.1 32474828 1790257 3993813..3994457 1 NC_005027.1 signal peptide 3994457 1790257 RB7447 Rhodopirellula baltica SH 1 signal peptide NP_867822.1 3993813 D 243090 CDS NP_867823.1 32474829 1794452 3994530..3994706 1 NC_005027.1 hypothetical protein 3994706 1794452 RB7451 Rhodopirellula baltica SH 1 hypothetical protein NP_867823.1 3994530 D 243090 CDS NP_867824.1 32474830 1790816 3994713..3995225 1 NC_005027.1 PMID: 98282232 best DB hits: BLAST: gb:AAF23370.1; (AF178219) MMSET type II [Homo sapiens]; E=5e-12 ddbj:BAA83042.1; (AB029013) KIAA1090 protein [Homo sapiens]; E=5e-12 gb:AAK00344.1; AF330040_1 (AF330040) IL-5 promoter; E=5e-12 COG: YHR119w; COG2940 Proteins containing SET domain; E=3e-06 PFAM: PF00856; SET domain; E=5.6e-16; hypothetical protein 3995225 1790816 RB7452 Rhodopirellula baltica SH 1 hypothetical protein NP_867824.1 3994713 D 243090 CDS NP_867825.1 32474831 1792351 3995366..3996511 1 NC_005027.1 PMID: 10930739 PMID: 2553733 best DB hits: BLAST: gb:AAG01802.1; AF276772_1 (AF276772) cysteine desulfurase NifS; E=4e-53 swissprot:P12623; NIFS_ANASP NIFS PROTEIN ----- pir: C34443; E=2e-50 swissprot:Q43884; NIFS_ANAAZ NIFS PROTEIN ----- gb: AAA87249.1; E=3e-50 COG: yfhO; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; E=3e-51 PFAM: PF00266; Aminotransferase class-V; E=7.9e-47; cysteine desulfurase 3996511 nifS 1792351 nifS Rhodopirellula baltica SH 1 cysteine desulfurase NP_867825.1 3995366 D 243090 CDS NP_867826.1 32474832 1791791 complement(3996496..3996714) 1 NC_005027.1 hypothetical protein 3996714 1791791 RB7454 Rhodopirellula baltica SH 1 hypothetical protein NP_867826.1 3996496 R 243090 CDS NP_867827.1 32474833 1796380 complement(3996761..3999277) 1 NC_005027.1 PMID: 20196006 best DB hits: BLAST: gb:AAF57876.1; (AE003803) CG6564 gene product [Drosophila; E=0.010 embl:CAA96576.1; (Z72495) ZP2 [Carassius auratus]; E=0.47; hypothetical protein 3999277 1796380 RB7455 Rhodopirellula baltica SH 1 hypothetical protein NP_867827.1 3996761 R 243090 CDS NP_867828.1 32474834 1792420 complement(3999258..3999599) 1 NC_005027.1 hypothetical protein 3999599 1792420 RB7460 Rhodopirellula baltica SH 1 hypothetical protein NP_867828.1 3999258 R 243090 CDS NP_867829.1 32474835 1793365 3999634..4001478 1 NC_005027.1 best DB hits: BLAST: gb:AAA98756.1; (L29642) sensor kinase [Pseudomonas fluorescens]; E=2e-07 pir:S42745; nitrogen assimilation regulatory protein ntrC -; E=8e-07 swissprot:P45671; NTRC_AZOBR NITROGEN ASSIMILATION REGULATORY; E=4e-06 COG: VCA0142; COG2204 AAA superfamily ATPases with N-terminal receiver; E=7e-07 BB0570; COG0784 CheY-like receiver domains; E=6e-06 Rv0981; COG0745 Response regulators consisting of a CheY-like; E=9e-06 PFAM: PF01590; GAF domain; E=6.1e-16 PF00072; Response regulator receiver doma; E=7.9e-12; sensor kinase 4001478 1793365 RB7461 Rhodopirellula baltica SH 1 sensor kinase NP_867829.1 3999634 D 243090 CDS NP_867830.1 32474836 1796229 complement(4001480..4001614) 1 NC_005027.1 hypothetical protein 4001614 1796229 RB7464 Rhodopirellula baltica SH 1 hypothetical protein NP_867830.1 4001480 R 243090 CDS NP_867831.1 32474837 1791725 complement(4001633..4003504) 1 NC_005027.1 hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide; sulfite reductase subunit beta 4003504 sir 1791725 sir Rhodopirellula baltica SH 1 sulfite reductase subunit beta NP_867831.1 4001633 R 243090 CDS NP_867832.1 32474838 1796167 4003464..4004447 1 NC_005027.1 PMID: 8485162 best DB hits: BLAST: ddbj:BAB06503.1; (AP001516) methylenetetrahydrofolate; E=8e-74 swissprot:P54382; FOLD_BACSU FOLD BIFUNCTIONAL PROTEIN [INCLUDES:; E=2e-70 gb:AAF07929.1; AF186073_2 (AF186073) NMDMC isoform A [Drosophila; E=3e-70 COG: BH2784; COG0190 5,10-methylene-tetrahydrofolate dehydrogenase; E=8e-75 PFAM: PF00763; Tetrahydrofolate dehydrogenase/; E=4.3e-68 PF01262; Alanine dehydrogenase/pyridine; E=0.71 PF02882; Tetrahydrofolate dehydrogenase/; E=1.1e-101; 5,20-methylene-tetrahyrdofolate dehydrogenase (NADP+) / methylentetrahydrofolate cyclohydrolase 4004447 folD 1796167 folD Rhodopirellula baltica SH 1 5,20-methylene-tetrahyrdofolate dehydrogenase (NADP+) / methylentetrahydrofolate cyclohydrolase NP_867832.1 4003464 D 243090 CDS NP_867833.1 32474839 1797161 complement(4004558..4006096) 1 NC_005027.1 PMID: 91151356 PMID: 91151356 PMID: 92235856 best DB hits: BLAST: pir:S21801; myosin heavy chain, neuronal [similarity] - rat; E=0.047 gb:AAD01409.1; (AF007557) Mrp22 [Streptococcus pyogenes]; E=0.082 pir:S57834; fcrA protein precursor - Streptococcus pyogenes -----; E=0.15; hypothetical protein 4006096 1797161 RB7469 Rhodopirellula baltica SH 1 hypothetical protein NP_867833.1 4004558 R 243090 CDS NP_867834.1 32474840 1791274 complement(4006083..4006361) 1 NC_005027.1 hypothetical protein 4006361 1791274 RB7471 Rhodopirellula baltica SH 1 hypothetical protein NP_867834.1 4006083 R 243090 CDS NP_867835.1 32474841 1792633 4006340..4009093 1 NC_005027.1 hypothetical protein 4009093 1792633 RB7472 Rhodopirellula baltica SH 1 hypothetical protein NP_867835.1 4006340 D 243090 CDS NP_867836.1 32474842 1796660 complement(4009223..4011820) 1 NC_005027.1 best DB hits: BLAST: pir:S75525; sensory transduction histidine kinase sll1228 -; E=3e-62 pir:S75136; sensory transduction histidine kinase slr2104 -; E=5e-60 pir:H82211; sensory box sensor histidine kinaseresponse regulator; E=1e-58 COG: VC1349_2; COG0642 Sensory transduction histidine kinases; E=9e-60 PFAM: PF00989; PAS domain; E=0.025 PF00785; PAC motif; E=0.012 PF00989; PAS domain; E=7.5e-05; sensory transduction histidine kinase 4011820 rpfC 1796660 rpfC Rhodopirellula baltica SH 1 sensory transduction histidine kinase NP_867836.1 4009223 R 243090 CDS NP_867837.1 32474843 1796402 4011889..4012086 1 NC_005027.1 hypothetical protein 4012086 1796402 RB7475 Rhodopirellula baltica SH 1 hypothetical protein NP_867837.1 4011889 D 243090 CDS NP_867838.1 32474844 1791210 complement(4012092..4013264) 1 NC_005027.1 signal peptide 4013264 1791210 RB7476 Rhodopirellula baltica SH 1 signal peptide NP_867838.1 4012092 R 243090 CDS NP_867839.1 32474845 1793380 4013334..4013702 1 NC_005027.1 hypothetical protein 4013702 1793380 RB7479 Rhodopirellula baltica SH 1 hypothetical protein NP_867839.1 4013334 D 243090 CDS NP_867840.1 32474846 1791672 4013745..4015334 1 NC_005027.1 PMID: 7910580 PMID: 1572648 best DB hits: BLAST: embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=2e-44 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=2e-44 pdb:1E2S; P Chain P, Crystal Structure Of An Arylsulfatase A; E=2e-43 COG: aslA; COG3119 Arylsulfatase A and related enzymes; E=2e-27 PFAM: PF00884; Sulfatase; E=1.7e-47 PF01920; KE2 family protein; E=0.32; arylsulphatase A 4015334 arsA 1791672 arsA Rhodopirellula baltica SH 1 arylsulphatase A NP_867840.1 4013745 D 243090 CDS NP_867841.1 32474847 1796006 complement(4015443..4016498) 1 NC_005027.1 PMID: 96125720 PMID: 97158136 PMID: 2793833 best DB hits: BLAST: gb:AAB48319.1; (U29691) CDP-tyvelose epimerase [Yersinia; E=2e-29 swissprot:P14169; RFBE_SALTI CDP-TYVELOSE-2-EPIMERASE -----; E=3e-27 pir:B33604; rfbE protein - Salmonella sp; E=7e-26 COG: HI0873; COG1088 dTDP-D-glucose 4,6-dehydratase; E=5e-19 BH3649; COG0451 Nucleoside-diphosphate-sugar epimerases; E=1e-14 PH0414; COG1088 dTDP-D-glucose 4,6-dehydratase; E=1e-14 PFAM: PF01370; NAD dependent epimerase/dehydratase; E=0.0012; CDP-tyvelose epimerase 4016498 rfbE 1796006 rfbE Rhodopirellula baltica SH 1 CDP-tyvelose epimerase NP_867841.1 4015443 R 243090 CDS NP_867842.1 32474848 1794933 complement(4016511..4016675) 1 NC_005027.1 hypothetical protein 4016675 1794933 RB7484 Rhodopirellula baltica SH 1 hypothetical protein NP_867842.1 4016511 R 243090 CDS NP_867843.1 32474849 1795768 complement(4016672..4017064) 1 NC_005027.1 hypothetical protein 4017064 1795768 RB7486 Rhodopirellula baltica SH 1 hypothetical protein NP_867843.1 4016672 R 243090 CDS NP_867844.1 32474850 1794096 4017110..4017949 1 NC_005027.1 PMID: 2666400 best DB hits: BLAST: swissprot:P14377; HYDH_ECOLI SENSOR PROTEIN HYDH ----- pir:; E=5e-19 gb:AAG59200.1; AE005632_1 (AE005632) sensor kinase for HydG,; E=6e-18 swissprot:P07168; VIRA_AGRT6 WIDE HOST RANGE VIRA PROTEIN (WHR; E=6e-18 COG: hydH; COG0642 Sensory transduction histidine kinases; E=5e-20 PFAM: PF00512; His Kinase A (phosphoacceptor) doma; E=1.1e-06 PF02518; Histidine kinase-, DNA gyrase B-, p; E=4e-35; sensor protein HYDH 4017949 hydH 1794096 hydH Rhodopirellula baltica SH 1 sensor protein HYDH NP_867844.1 4017110 D 243090 CDS NP_867845.1 32474851 1793494 4018102..4018983 1 NC_005027.1 PMID: 99402746 PMID: 10473412 best DB hits: BLAST: ddbj:BAA20094.1; (D78338) L-proline 4-hydroxylase; E=1e-10 gb:AAF54534.2; (AE003688) CG14688 gene product [Drosophila; E=3e-07 ddbj:BAA75924.1; (D73371) epoxidase subunit A [Penicillium; E=3e-06; L-proline 4-hydroxylase 4018983 1793494 RB7491 Rhodopirellula baltica SH 1 L-proline 4-hydroxylase NP_867845.1 4018102 D 243090 CDS NP_867846.1 32474852 1794939 4019046..4020083 1 NC_005027.1 best DB hits: BLAST: pir:B75025; NADH-dependent dyhydrogenase related protein PAB1139 -; E=2e-11 pir:E71201; probable glucose-fructose oxidoreductase - Pyrococcus; E=8e-10 gb:AAC01706.1; (AF040570) unknown [Amycolatopsis mediterranei]; E=2e-09 COG: PAB1139; COG0673 Predicted dehydrogenases and related proteins; E=2e-12 PFAM: PF01408; Oxidoreductase, NAD-bin; E=3.2e-10 PF02894; Oxidoreductase, C-termi; E=3.4e-05; NADH-dependent dyhydrogenase related protein 4020083 1794939 RB7494 Rhodopirellula baltica SH 1 NADH-dependent dyhydrogenase related protein NP_867846.1 4019046 D 243090 CDS NP_867847.1 32474853 1795764 complement(4020151..4029972) 1 NC_005027.1 PMID: 11932238 best DB hits: BLAST: gb:AAD38597.1; AF145622_1 (AF145622) BcDNA.GH04245 [Drosophila; E=6e-08 gb:AAG22339.1; (AE003787) Ogt gene product [alt 3] [Drosophila; E=6e-08 swissprot:P56558; OGT1_RAT UDP-N-ACETYLGLUCOSAMINE--PEPTIDE; E=9e-08 COG: MTH72; COG0457 TPR-repeat-containing proteins; E=9e-07 PFAM: PF00515; TPR Domain; E=0.017 PF00671; Iron/Ascorbate oxidoreductase; E=0.67 PF00515; TPR Domain; E=0.21; hypothetical protein 4029972 1795764 RB7495 Rhodopirellula baltica SH 1 hypothetical protein NP_867847.1 4020151 R 243090 CDS NP_867848.1 32474854 1795421 4030069..4031112 1 NC_005027.1 PMID: 98065943 PMID: 9403685 PMID: 8997703 best DB hits: BLAST: pir:H70121; methanol dehydrogenase regulator (moxR) homolog - Lyme; E=2e-65 embl:CAA65298.1; (X96434) moxR [Borrelia burgdorferi] -----; E=3e-63 pir:C83106; conserved hypothetical protein PA4322 [imported] -; E=1e-61 COG: BB0176; COG0714 MoxR-like ATPases; E=2e-66 PFAM: PF00004; ATPase associated with; E=1.1e-05 PF02223; Thymidylate kinase; E=0.47 PF01078; Magnesium chelatase, subunit; E=3.9e-08; methanol dehydrogenase regulator (moxR)-like protein 4031112 moxR 1795421 moxR Rhodopirellula baltica SH 1 methanol dehydrogenase regulator (moxR)-like protein NP_867848.1 4030069 D 243090 CDS NP_867849.1 32474855 1794246 4031109..4032011 1 NC_005027.1 PMID: 97061201 best DB hits: BLAST: pir:S75346; hypothetical protein slr2013 - Synechocystis sp. (strain; E=3e-11 pir:D83106; hypothetical protein PA4323 [imported] - Pseudomonas; E=1e-10 embl:CAB90930.1; (AL355774) lipoprotein [Streptomyces; E=1e-09 COG: slr2013; COG1721 Uncharacterized ACR; E=3e-12 PFAM: PF01882; Protein of unknown function DUF58; E=2.5e-18; hypothetical protein 4032011 1794246 RB7501 Rhodopirellula baltica SH 1 hypothetical protein NP_867849.1 4031109 D 243090 CDS NP_867850.1 32474856 1791489 4032015..4033937 1 NC_005027.1 PMID: 11932238; hypothetical protein 4033937 1791489 RB7502 Rhodopirellula baltica SH 1 hypothetical protein NP_867850.1 4032015 D 243090 CDS NP_867851.1 32474857 1790733 4033904..4036606 1 NC_005027.1 PMID: 11932238 PMID: 96127529 PMID: 8590279 best DB hits: BLAST: swissprot:Q55874; Y103_SYNY3 HYPOTHETICAL 45.8 KD PROTEIN SLL0103; E=5e-12 gb:AAF13350.1; AF121336_1 (AF121336) unknown [Eufolliculina; E=4e-11 embl:CAB75310.1; (AL139164) lipoprotein [Streptomyces; E=1e-10 COG: sll0103; COG2304 Protein containing von Willebrand factor (vWF) type; E=5e-13 yfbK; COG2304 Protein containing von Willebrand factor (vWF) type A; E=2e-09 DRA0331; COG2304 Protein containing von Willebrand factor (vWF) type; E=0.003 PFAM: PF00092; von Willebrand factor type A domain; E=0.024; chloride channel 4036606 1790733 RB7503 Rhodopirellula baltica SH 1 chloride channel NP_867851.1 4033904 D 243090 CDS NP_867852.1 32474858 1791500 4036748..4038313 1 NC_005027.1 PMID: 93211444; hypothetical protein 4038313 1791500 RB7507 Rhodopirellula baltica SH 1 hypothetical protein NP_867852.1 4036748 D 243090 CDS NP_867853.1 32474859 1794175 complement(4038376..4039899) 1 NC_005027.1 signal peptide 4039899 1794175 RB7509 Rhodopirellula baltica SH 1 signal peptide NP_867853.1 4038376 R 243090 CDS NP_867854.1 32474860 1796316 complement(4039899..4041125) 1 NC_005027.1 PMID: 94281248 PMID: 8011666 PMID: 97419514 PMID: 9274029 best DB hits: BLAST: swissprot:P40407; YBBC_BACSU HYPOTHETICAL 46.0 KDA PROTEIN IN; E=6e-75 ddbj:BAB04393.1; (AP001509) BH0674~unknown conserved protein; E=3e-71 pir:G81651; conserved hypothetical protein TC0894 [imported] -; E=5e-47; hypothetical protein 4041125 1796316 RB7510 Rhodopirellula baltica SH 1 hypothetical protein NP_867854.1 4039899 R 243090 CDS NP_867855.1 32474861 1791196 complement(4041167..4042690) 1 NC_005027.1 PMID: 97000351 PMID: 8559252 best DB hits: BLAST: embl:CAC16517.1; (AL450223) integral membrane transport; E=3e-41 pir:A82432; sodiumsolute symporter VCA0667 [imported] - Vibrio; E=4e-26 pir:S75887; hypothetical protein - Synechocystis sp. (strain PCC; E=2e-25 COG: VCA0667; COG0591 Na+/proline, Na+/panthothenate symporters and; E=4e-27 yidK; COG0591 Na+/proline, Na+/panthothenate symporters and related; E=2e-06 PA0287; COG0591 Na+/proline, Na+/panthothenate symporters and; E=2e-06 PFAM: PF00474; Sodium:solute symporter family; E=1.6e-20; integral membrane transport protein 4042690 1791196 RB7512 Rhodopirellula baltica SH 1 integral membrane transport protein NP_867855.1 4041167 R 243090 CDS NP_867856.1 32474862 1792933 4042826..4043734 1 NC_005027.1 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid-6-phosphate etherase 4043734 murQ 1792933 murQ Rhodopirellula baltica SH 1 N-acetylmuramic acid-6-phosphate etherase NP_867856.1 4042826 D 243090 CDS NP_867857.1 32474863 1794021 4043608..4044696 1 NC_005027.1 best DB hits: BLAST: gb:AAF19757.1; AC009917_16 (AC009917) F26G16.16 [Arabidopsis; E=7e-24 embl:CAB71200.1; (AL138538) kinase [Streptomyces; E=6e-20 gb:AAF55174.1; (AE003708) CG6218 gene product [Drosophila; E=8e-12 COG: Ta0122; COG2971 Uncharacterized BCR; E=2e-06; N-acetylglucosamine kinase 4044696 1794021 RB7515 Rhodopirellula baltica SH 1 N-acetylglucosamine kinase NP_867857.1 4043608 D 243090 CDS NP_867858.1 32474864 1792401 complement(4044716..4045426) 1 NC_005027.1 hypothetical protein 4045426 1792401 RB7517 Rhodopirellula baltica SH 1 hypothetical protein NP_867858.1 4044716 R 243090 CDS NP_867859.1 32474865 1791630 complement(4045551..4045736) 1 NC_005027.1 hypothetical protein 4045736 1791630 RB7518 Rhodopirellula baltica SH 1 hypothetical protein NP_867859.1 4045551 R 243090 CDS NP_867860.1 32474866 1795139 4045790..4047814 1 NC_005027.1 best DB hits: PFAM: PF01841; Transglutaminase-like superfam; E=0.039; signal peptide 4047814 1795139 RB7521 Rhodopirellula baltica SH 1 signal peptide NP_867860.1 4045790 D 243090 CDS NP_867861.1 32474867 1790106 4047815..4047928 1 NC_005027.1 hypothetical protein 4047928 1790106 RB7522 Rhodopirellula baltica SH 1 hypothetical protein NP_867861.1 4047815 D 243090 CDS NP_867862.1 32474868 1790925 4047925..4048074 1 NC_005027.1 hypothetical protein 4048074 1790925 RB7523 Rhodopirellula baltica SH 1 hypothetical protein NP_867862.1 4047925 D 243090 CDS NP_867863.1 32474869 1793418 complement(4048085..4048930) 1 NC_005027.1 PMID: 2250030; signal peptide 4048930 1793418 RB7525 Rhodopirellula baltica SH 1 signal peptide NP_867863.1 4048085 R 243090 CDS NP_867864.1 32474870 1796213 complement(4049005..4049298) 1 NC_005027.1 hypothetical protein 4049298 1796213 RB7530 Rhodopirellula baltica SH 1 hypothetical protein NP_867864.1 4049005 R 243090 CDS NP_867865.1 32474871 1795166 complement(4049347..4049706) 1 NC_005027.1 hypothetical protein 4049706 1795166 RB7531 Rhodopirellula baltica SH 1 hypothetical protein NP_867865.1 4049347 R 243090 CDS NP_867866.1 32474872 1792798 4049364..4049582 1 NC_005027.1 hypothetical protein 4049582 1792798 RB7532 Rhodopirellula baltica SH 1 hypothetical protein NP_867866.1 4049364 D 243090 CDS NP_867867.1 32474873 1794690 4049600..4049971 1 NC_005027.1 PMID: 11930014; hypothetical protein 4049971 1794690 RB7533 Rhodopirellula baltica SH 1 hypothetical protein NP_867867.1 4049600 D 243090 CDS NP_867868.1 32474874 1791716 4050024..4050434 1 NC_005027.1 hypothetical protein 4050434 1791716 RB7535 Rhodopirellula baltica SH 1 hypothetical protein NP_867868.1 4050024 D 243090 CDS NP_867869.1 32474875 1793623 4050553..4052556 1 NC_005027.1 PMID: 20406833 best DB hits: BLAST: pir:A82284; conserved hypothetical protein VC0762 [imported] -; E=0.029 pir:T29127; hypothetical protein SC1F2.18 - Streptomyces coelicolor; E=0.18 pir:H69064; serinethreonine protein kinase related protein -; E=0.49 COG: VC0762; COG1520 Uncharacterized proteins of WD40-like repeat family; E=0.003 PFAM: PF01011; PQQ enzyme repeat; E=0.054; hypothetical protein 4052556 1793623 RB7538 Rhodopirellula baltica SH 1 hypothetical protein NP_867869.1 4050553 D 243090 CDS NP_867870.1 32474876 1790103 4052562..4052732 1 NC_005027.1 hypothetical protein 4052732 1790103 RB7540 Rhodopirellula baltica SH 1 hypothetical protein NP_867870.1 4052562 D 243090 CDS NP_867871.1 32474877 1795250 4052699..4054777 1 NC_005027.1 PMID: 98037514 best DB hits: BLAST: pir:H69064; serinethreonine protein kinase related protein -; E=0.16; serine/threonine protein kinase related protein 4054777 1795250 RB7541 Rhodopirellula baltica SH 1 serine/threonine protein kinase related protein NP_867871.1 4052699 D 243090 CDS NP_867872.1 32474878 1796724 4054857..4054997 1 NC_005027.1 hypothetical protein 4054997 1796724 RB7542 Rhodopirellula baltica SH 1 hypothetical protein NP_867872.1 4054857 D 243090 CDS NP_867873.1 32474879 1796745 complement(4054985..4055206) 1 NC_005027.1 hypothetical protein 4055206 1796745 RB7544 Rhodopirellula baltica SH 1 hypothetical protein NP_867873.1 4054985 R 243090 CDS NP_867874.1 32474880 1795794 4055149..4055379 1 NC_005027.1 hypothetical protein 4055379 1795794 RB7545 Rhodopirellula baltica SH 1 hypothetical protein NP_867874.1 4055149 D 243090 CDS NP_867875.1 32474881 1792219 complement(4055403..4056287) 1 NC_005027.1 PMID: 99215588 PMID: 6356036 best DB hits: BLAST: swissprot:O67422; METF_AQUAE 5,10-METHYLENETETRAHYDROFOLATE; E=1e-57 pir:T47821; methylenetetrahydrofolate reductase MTHFR1 - Arabidopsis; E=6e-50 gb:AAD51733.1; AF174486_1 (AF174486) methylenetetrahydrofolate; E=6e-48 COG: aq_1429; COG0685 5,10-methylenetetrahydrofolate reductase; E=1e-58 PFAM: PF02219; Methylenetetrahydrofolate reductase; E=2.9e-97; 5,10-methylenetetrahydrofolate reductase 4056287 metF 1792219 metF Rhodopirellula baltica SH 1 5,10-methylenetetrahydrofolate reductase NP_867875.1 4055403 R 243090 CDS NP_867876.1 32474882 1790806 4056333..4056542 1 NC_005027.1 hypothetical protein 4056542 1790806 RB7547 Rhodopirellula baltica SH 1 hypothetical protein NP_867876.1 4056333 D 243090 CDS NP_867877.1 32474883 1790142 complement(4056682..4057539) 1 NC_005027.1 PMID: 98007868 PMID: 99047670 best DB hits: BLAST: gb:AAF01812.1; AF187532_8 (AF187532) SnoK [Streptomyces nogalater]; E=1e-09 gb:AAD50521.1; (U25130) syringomycin biosynthesis enzyme 2; E=1e-09 gb:AAC71711.1; (AF061267) alpha-ketoglutarate-dependent; E=1e-07; syringomycin biosynthesis enzyme 2 4057539 1790142 RB7548 Rhodopirellula baltica SH 1 syringomycin biosynthesis enzyme 2 NP_867877.1 4056682 R 243090 CDS NP_867878.1 32474884 1796051 4057545..4057727 1 NC_005027.1 hypothetical protein 4057727 1796051 RB7549 Rhodopirellula baltica SH 1 hypothetical protein NP_867878.1 4057545 D 243090 CDS NP_867879.1 32474885 1791161 4057734..4058303 1 NC_005027.1 hypothetical protein 4058303 1791161 RB7550 Rhodopirellula baltica SH 1 hypothetical protein NP_867879.1 4057734 D 243090 CDS NP_867880.1 32474886 1793046 4058314..4058751 1 NC_005027.1 PMID: 11823852; signal peptide 4058751 1793046 RB7554 Rhodopirellula baltica SH 1 signal peptide NP_867880.1 4058314 D 243090 CDS NP_867881.1 32474887 1790067 4058409..4058948 1 NC_005027.1 hypothetical protein 4058948 1790067 RB7555 Rhodopirellula baltica SH 1 hypothetical protein NP_867881.1 4058409 D 243090 CDS NP_867882.1 32474888 1792366 4058936..4059919 1 NC_005027.1 best DB hits: BLAST: swissprot:P70960; YWMC_BACSU HYPOTHETICAL 24.5 KDA PROTEIN IN; E=3e-05 embl:CAB75310.1; (AL139164) lipoprotein [Streptomyces; E=4e-05 swissprot:Q55874; Y103_SYNY3 HYPOTHETICAL 45.8 KD PROTEIN SLL0103; E=6e-05 COG: BS_ywmC; COG2304 Protein containing von Willebrand factor (vWF) type; E=3e-06 VCA0172; COG3035 Uncharacterized BCR; E=3e-05 PFAM: PF00092; von Willebrand factor type A domain; E=0.013; hypothetical protein 4059919 1792366 RB7557 Rhodopirellula baltica SH 1 hypothetical protein NP_867882.1 4058936 D 243090 CDS NP_867883.1 32474889 1793867 4059970..4060392 1 NC_005027.1 transporter 4060392 1793867 RB7559 Rhodopirellula baltica SH 1 transporter NP_867883.1 4059970 D 243090 CDS NP_867884.1 32474890 1791001 complement(4060394..4061986) 1 NC_005027.1 PMID: 1755850 PMID: 8001980 PMID: 1522213 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=1e-31 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=4e-30 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=8e-28 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=3e-26 PFAM: PF00884; Sulfatase; E=7.7e-45; N-acetylgalactosamine 6-sulfate sulfatase (GALNS) 4061986 GALNS 1791001 GALNS Rhodopirellula baltica SH 1 N-acetylgalactosamine 6-sulfate sulfatase (GALNS) NP_867884.1 4060394 R 243090 CDS NP_867885.1 32474891 1791469 complement(4062057..4062959) 1 NC_005027.1 PMID: 97288094 best DB hits: BLAST: pir:B75555; probable lipaseesterase - Deinococcus radiodurans; E=1e-14 pir:B70961; probable esterase - Mycobacterium tuberculosis (strain; E=1e-13 pir:H70731; probable esterase - Mycobacterium tuberculosis (strain; E=2e-08 COG: DR0133; COG0657 Acetyl esterase; E=1e-15 APE2441; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; E=1e-04 Rv1399c; COG0657 Acetyl esterase; E=0.001; lipase/esterase 4062959 1791469 RB7562 Rhodopirellula baltica SH 1 lipase/esterase NP_867885.1 4062057 R 243090 CDS NP_867886.1 32474892 1795453 complement(4062975..4063148) 1 NC_005027.1 hypothetical protein 4063148 1795453 RB7563 Rhodopirellula baltica SH 1 hypothetical protein NP_867886.1 4062975 R 243090 CDS NP_867887.1 32474893 1793263 4063124..4064311 1 NC_005027.1 PMID: 8437592 best DB hits: BLAST: swissprot:Q03046; CEFD_NOCLA ISOPENICILLIN N EPIMERASE -----; E=8e-34 ddbj:BAA96579.1; (AP002480) ESTs AU091298(C61241),C28476(C61241); E=2e-31 swissprot:P18549; CEFD_STRCL ISOPENICILLIN N EPIMERASE -----; E=6e-31 COG: csdB; COG0520 Selenocysteine lyase; E=3e-15 VC0748; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; E=1e-07 XF1473; COG0520 Selenocysteine lyase; E=2e-07 PFAM: PF00266; Aminotransferase class-V; E=1.3e-12; isopenicillin N-epimerase 4064311 cefD 1793263 cefD Rhodopirellula baltica SH 1 isopenicillin N-epimerase NP_867887.1 4063124 D 243090 CDS NP_867888.1 32474894 1790699 complement(4064351..4065637) 1 NC_005027.1 PMID: 11743193; hypothetical protein 4065637 1790699 RB7565 Rhodopirellula baltica SH 1 hypothetical protein NP_867888.1 4064351 R 243090 CDS NP_867889.1 32474895 1796360 complement(4065613..4065720) 1 NC_005027.1 hypothetical protein 4065720 1796360 RB7566 Rhodopirellula baltica SH 1 hypothetical protein NP_867889.1 4065613 R 243090 CDS NP_867890.1 32474896 1794712 4065664..4065873 1 NC_005027.1 hypothetical protein 4065873 1794712 RB7567 Rhodopirellula baltica SH 1 hypothetical protein NP_867890.1 4065664 D 243090 CDS NP_867891.1 32474897 1792384 complement(4065680..4065898) 1 NC_005027.1 hypothetical protein 4065898 1792384 RB7568 Rhodopirellula baltica SH 1 hypothetical protein NP_867891.1 4065680 R 243090 CDS NP_867892.1 32474898 1792312 4065806..4066708 1 NC_005027.1 PMID: 96102858 best DB hits: BLAST: swissprot:P55044; FPG_NEIMB FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE; E=2e-29 swissprot:P95744; FPG_SYNEN FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE; E=6e-29 prf:2204218A; formamidopyrimidine-DNA glycosylase [Neisseria; E=7e-28 COG: NMB1295; COG0266 Formamidopyrimidine-DNA glycosylase; E=2e-30 PFAM: PF01149; Formamidopyrimidine-DNA glycos; E=6.4e-14; formamidopyrimidine-DNA glycosylase 4066708 mutM 1792312 mutM Rhodopirellula baltica SH 1 formamidopyrimidine-DNA glycosylase NP_867892.1 4065806 D 243090 CDS NP_867893.1 32474899 1796374 complement(4066752..4068164) 1 NC_005027.1 PMID: 99287316 best DB hits: BLAST: pir:G72396; 6-phosphofructokinase, pyrophosphate-dependent -; E=1e-36 pir:S54978; 6-phosphofructokinase (EC 2.7.1.11),; E=9e-32 gb:AAA85791.1; (U11733) pyrophosphate-dependent; E=1e-31 COG: TM0289; COG0205 6-phosphofructokinase; E=1e-37 PFAM: PF00365; Phosphofructokinase; E=0.0021; 6-phosphofructokinase 4068164 pfkA 1796374 pfkA Rhodopirellula baltica SH 1 6-phosphofructokinase NP_867893.1 4066752 R 243090 CDS NP_867894.1 32474900 1790525 complement(4068298..4069113) 1 NC_005027.1 PMID: 11889109 best DB hits: BLAST: pir:F64553; hypothetical protein HP0270 - Helicobacter pylori; E=6e-07 pir:F71953; hypothetical protein jhp0255 - Helicobacter pylori; E=6e-07 swissprot:Q9ZE57; Y090_RICPR HYPOTHETICAL PROTEIN RP090 -----; E=8e-07 COG: jhp0255; COG2121 Uncharacterized BCR; E=6e-08 PFAM: PF01553; Acyltransferase; E=0.068; hypothetical protein 4069113 1790525 RB7574 Rhodopirellula baltica SH 1 hypothetical protein NP_867894.1 4068298 R 243090 CDS NP_867895.1 32474901 1795983 complement(4069269..4070366) 1 NC_005027.1 hypothetical protein 4070366 1795983 RB7577 Rhodopirellula baltica SH 1 hypothetical protein NP_867895.1 4069269 R 243090 CDS NP_867896.1 32474902 1789981 4070466..4071035 1 NC_005027.1 PMID: 11727819 best DB hits: BLAST: gb:AAG40471.1; (AF216382) global regulator [Legionella; E=4e-10 gb:AAK03372.1; (AE006168) CsrA [Pasteurella multocida]; E=8e-09 swissprot:Q9WY93; CSRA_THEMA CARBON STORAGE REGULATOR HOMOLOG; E=6e-08 COG: TM0251; COG1551 Carbon storage regulator (could also regulate; E=6e-09 PFAM: PF02599; Carbon storage regulator; E=2.5e-19; global regulator 4071035 csrA 1789981 csrA Rhodopirellula baltica SH 1 global regulator NP_867896.1 4070466 D 243090 CDS NP_867897.1 32474903 1790281 4071162..4072619 1 NC_005027.1 PMID: 8346225 best DB hits: BLAST: swissprot:Q06065; ATOC_ECOLI ACETOACETATE METABOLISM REGULATORY; E=2e-88 pir:F71315; probable response regulatory protein (atoC) - syphilis; E=6e-87 gb:AAF18103.1; AF204400_3 (AF204400) FrgC [Myxococcus xanthus]; E=5e-82 COG: atoC; COG2204 AAA superfamily ATPases with N-terminal receiver; E=2e-89 PFAM: PF00072; Response regulator receiver doma; E=3.9e-32 PF00005; ABC transporter; E=0.86 PF00004; ATPase associated with va; E=5.1e-06; acetoacetate metabolism regulatory protein ATOC 4072619 atoC 1790281 atoC Rhodopirellula baltica SH 1 acetoacetate metabolism regulatory protein ATOC NP_867897.1 4071162 D 243090 CDS NP_867898.1 32474904 1795978 4072588..4073415 1 NC_005027.1 PMID: 10075431 best DB hits: BLAST: pir:E71057; probable thiamin biosynthesis protein - Pyrococcus; E=4e-45 pir:C75087; hydroxymethylpyrimidine phosphate kinase (thid) PAB1646; E=2e-44 pir:F75613; phosphomethylpyrimidine kinase - Deinococcus radiodurans; E=5e-43 COG: PH1155_1; COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine; E=4e-46 thiD; COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; E=3e-42 NMB1616; COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine; E=3e-41 PFAM: PF01031; Dynamin central region; E=0.41 PF00294; pfkB family carbohydrate kinase; E=7.7e-08; thiamin biosynthesis protein 4073415 thiD 1795978 thiD Rhodopirellula baltica SH 1 thiamin biosynthesis protein NP_867898.1 4072588 D 243090 CDS NP_867899.1 32474905 1797187 complement(4073449..4074489) 1 NC_005027.1 hypothetical protein 4074489 1797187 RB7581 Rhodopirellula baltica SH 1 hypothetical protein NP_867899.1 4073449 R 243090 CDS NP_867900.1 32474906 1797171 complement(4074530..4075372) 1 NC_005027.1 PMID: 99411980 PMID: 99184645 PMID: 99356711 PMID: 99209008 PMID: 99184646 PMID: 20263314 best DB hits: BLAST: ddbj:BAB06531.1; (AP001516) lipoate protein ligase [Bacillus; E=3e-24 pir:D69959; conserved hypothetical protein yqhM - Bacillus subtilis; E=8e-22 pir:C72462; hypothetical protein APE2342 - Aeropyrum pernix (strain; E=8e-17 COG: BH2812; COG0095 Lipoate-protein ligase A; E=3e-25 PFAM: PF02539; Lipoate-protein ligase A; E=1.4e-11; lipoate protein ligase 4075372 lplA 1797171 lplA Rhodopirellula baltica SH 1 lipoate protein ligase NP_867900.1 4074530 R 243090 CDS NP_867901.1 32474907 1795707 complement(4075369..4076871) 1 NC_005027.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 4076871 yqhK 1795707 yqhK Rhodopirellula baltica SH 1 glycine dehydrogenase subunit 2 NP_867901.1 4075369 R 243090 CDS NP_867902.1 32474908 1792846 complement(4076905..4078350) 1 NC_005027.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 4078350 yqhJ 1792846 yqhJ Rhodopirellula baltica SH 1 glycine dehydrogenase subunit 1 NP_867902.1 4076905 R 243090 CDS NP_867903.1 32474909 1792961 complement(4078313..4078711) 1 NC_005027.1 PMID: 1802033 PMID: 8375392 PMID: 8219277 best DB hits: BLAST: swissprot:Q9WY55; GCSH_THEMA PROBABLE GLYCINE CLEAVAGE SYSTEM H; E=6e-15 swissprot:P23884; GCSH_ECOLI GLYCINE CLEAVAGE SYSTEM H PROTEIN; E=3e-14 gb:AAC61829.1; (AC004667) glycine decarboxylase complex H-protein; E=3e-14 COG: TM0212; COG0509 Glycine cleavage system H protein (lipoate-binding); E=6e-16 VNG1605G; COG0509 Glycine cleavage system H protein; E=4e-14 VCA0277; COG0509 Glycine cleavage system H protein (lipoate-binding); E=8e-14 PFAM: PF01597; Glycine cleavage H-protein; E=9.4e-39; glycine cleavage system H protein 4078711 gcvH 1792961 gcvH Rhodopirellula baltica SH 1 glycine cleavage system H protein NP_867903.1 4078313 R 243090 CDS NP_867904.1 32474910 1797157 complement(4078815..4079981) 1 NC_005027.1 PMID: 8165246 best DB hits: BLAST: swissprot:O86567; GCST_STRCO PROBABLE AMINOMETHYLTRANSFERASE; E=6e-67 swissprot:P54378; GCST_BACSU PROBABLE AMINOMETHYLTRANSFERASE; E=1e-61 swissprot:Q9K934; GCST_BACHD PROBABLE AMINOMETHYLTRANSFERASE; E=2e-59 COG: BS_yqhI; COG0404 Glycine cleavage system T protein; E=1e-62 PFAM: PF01571; Glycine cleavage T-protein (aminomet; E=7.5e-102; aminotransferase-glycine cleavage system T protein 4079981 gcvT 1797157 gcvT Rhodopirellula baltica SH 1 aminotransferase-glycine cleavage system T protein NP_867904.1 4078815 R 243090 CDS NP_867905.1 32474911 1792701 complement(4079978..4080238) 1 NC_005027.1 hypothetical protein 4080238 1792701 RB7589 Rhodopirellula baltica SH 1 hypothetical protein NP_867905.1 4079978 R 243090 CDS NP_867906.1 32474912 1796553 complement(4080204..4083185) 1 NC_005027.1 PMID: 96178988 best DB hits: BLAST: pir:D75377; probable proteinase - Deinococcus radiodurans (strain; E=1e-172 gb:AAC98910.1; (AF028721) protease [Rhodothermus sp. 'ITI 518']; E=5e-37 pir:C82309; probable insulinase-type proteinase VC0554 [imported] -; E=2e-36 COG: DR1598; COG0612 Predicted Zn-dependent peptidases; E=1e-173 PFAM: PF00675; Insulinase (Peptidase M; E=3e-15; proteinase 4083185 1796553 RB7590 Rhodopirellula baltica SH 1 proteinase NP_867906.1 4080204 R 243090 CDS NP_867907.1 32474913 1795197 4083050..4083712 1 NC_005027.1 best DB hits: BLAST: embl:CAA09913.1; (AJ012090) ferredoxin [Xanthobacter sp. Py2]; E=7e-06 pir:B83424; assimilatory nitrite reductase small subunit PA1780; E=8e-06 gb:AAD46364.1; AF161183_4 (AF161183) PrnD [Burkholderia cepacia]; E=3e-04 COG: PA1780; COG2146 Ferredoxin subunits of nitrite reductase and; E=8e-07 PFAM: PF00355; Rieske [2Fe-2S] domain; E=1.7e-15; ferredoxin 4083712 1795197 RB7592 Rhodopirellula baltica SH 1 ferredoxin NP_867907.1 4083050 D 243090 CDS NP_867908.1 32474914 1796744 complement(4083655..4083975) 1 NC_005027.1 hypothetical protein 4083975 1796744 RB7594 Rhodopirellula baltica SH 1 hypothetical protein NP_867908.1 4083655 R 243090 CDS NP_867909.1 32474915 1791197 4084008..4084535 1 NC_005027.1 hypothetical protein 4084535 1791197 RB7596 Rhodopirellula baltica SH 1 hypothetical protein NP_867909.1 4084008 D 243090 CDS NP_867910.1 32474916 1791434 4084525..4084977 1 NC_005027.1 best DB hits: BLAST: pir:C82396; transcriptional regulator MarR family VCA0955 [imported] -; E=3e-04 embl:CAB95985.1; (AL360034) MarR-family regulatory; E=4e-04 gb:AAD05186.1; (AF110185) unknown [Burkholderia pseudomallei]; E=8e-04 COG: VCA0955; COG1846 Transcriptional regulators; E=3e-05 PFAM: PF01047; MarR family; E=5.2e-13; MarR family transcriptional regulator 4084977 marR 1791434 marR Rhodopirellula baltica SH 1 MarR family transcriptional regulator NP_867910.1 4084525 D 243090 CDS NP_867911.1 32474917 1789938 4084913..4086382 1 NC_005027.1 PMID: 92267380 best DB hits: BLAST: pir:JC1118; alkyl sulfatase (EC 3.1.6.-) - Pseudomonas sp -----; E=2e-61 pir:G83552; probable beta-lactamase PA0740 [imported] - Pseudomonas; E=3e-48 embl:CAA99186.1; (Z74906) ORF YOL164w [Saccharomyces cerevisiae]; E=4e-43 COG: PA0740; COG2015 Alkyl sulfatase and related hydrolases; E=2e-49 aq_1798; COG0491 Zn-dependent hydrolases, including glyoxylases; E=2e-07 PFAM: PF00753; Metallo-beta-lactamase superfamil; E=5.2e-32 PF02151; UvrB/uvrC motif; E=0.24; alkyl sulfatase or beta-lactamase 4086382 1789938 RB7598 Rhodopirellula baltica SH 1 alkyl sulfatase or beta-lactamase NP_867911.1 4084913 D 243090 CDS NP_867912.1 32474918 1797180 complement(4086379..4086498) 1 NC_005027.1 hypothetical protein 4086498 1797180 RB7599 Rhodopirellula baltica SH 1 hypothetical protein NP_867912.1 4086379 R 243090 CDS NP_867913.1 32474919 1791060 complement(4086470..4088107) 1 NC_005027.1 PMID: 1541262 best DB hits: BLAST: swissprot:O86528; SYE_STRCO GLUTAMYL-TRNA SYNTHETASE; E=4e-74 ddbj:BAB03828.1; (AP001507) glutamyl-tRNA synthetase [Bacillus; E=2e-65 swissprot:Q9X172; SYE1_THEMA GLUTAMYL-TRNA SYNTHETASE 1; E=3e-65 COG: BH0109; COG0008 Glutamyl- and glutaminyl-tRNA synthetases; E=2e-66 PFAM: PF00749; tRNA synthetases class I (E and; E=1.3e-102; glutamyl-tRNA synthetase 4088107 gltX 1791060 gltX Rhodopirellula baltica SH 1 glutamyl-tRNA synthetase NP_867913.1 4086470 R 243090 CDS NP_867914.1 32474920 1795620 complement(4088110..4088460) 1 NC_005027.1 hypothetical protein 4088460 1795620 RB7601 Rhodopirellula baltica SH 1 hypothetical protein NP_867914.1 4088110 R 243090 CDS NP_867915.1 32474921 1791928 complement(4088560..4091070) 1 NC_005027.1 best DB hits: BLAST: pir:T23334; hypothetical protein K04H8.3 - Caenorhabditis elegans; E=0.53 PFAM: PF02321; Outer membrane efflux protein; E=0.0021; hypothetical protein 4091070 1791928 RB7603 Rhodopirellula baltica SH 1 hypothetical protein NP_867915.1 4088560 R 243090 CDS NP_867916.1 32474922 1796914 4090995..4091456 1 NC_005027.1 hypothetical protein 4091456 1796914 RB7607 Rhodopirellula baltica SH 1 hypothetical protein NP_867916.1 4090995 D 243090 CDS NP_867917.1 32474923 1794888 4091594..4092859 1 NC_005027.1 PMID: 98044033 best DB hits: BLAST: pir:C69985; probable DNA-dependent DNA polymerase beta chain yshC -; E=0.23 ddbj:BAB06826.1; (AP001517) DNA-dependent DNA polymerase beta; E=0.41 PFAM: PF02231; PHP domain N-terminal region; E=0.00015; DNA-dependent DNA polymerase beta chain yshC 4092859 1794888 RB7610 Rhodopirellula baltica SH 1 DNA-dependent DNA polymerase beta chain yshC NP_867917.1 4091594 D 243090 CDS NP_867918.1 32474924 1792274 4092907..4093317 1 NC_005027.1 hypothetical protein 4093317 1792274 RB7612 Rhodopirellula baltica SH 1 hypothetical protein NP_867918.1 4092907 D 243090 CDS NP_867919.1 32474925 1790410 complement(4093418..4093558) 1 NC_005027.1 hypothetical protein 4093558 1790410 RB7613 Rhodopirellula baltica SH 1 hypothetical protein NP_867919.1 4093418 R 243090 CDS NP_867920.2 161579030 1792963 complement(4093593..4094009) 1 NC_005027.1 PMID: 2828880 best DB hits: BLAST: pir:A65018; hypothetical protein b2434 - Escherichia coli (strain; E=2e-19 gb:AAG57552.1; AE005473_7 (AE005473) Z3699 gene product; E=3e-19 pir:F82455; probable acetyltransferase VCA0470 [imported] - Vibrio; E=3e-10 COG: ypeA; COG0456 Acetyltransferases; E=2e-20 VNG1215G; COG0454 Histone acetyltransferase HPA2 and related; E=1e-04 PA4534; COG0456 Acetyltransferases; E=1e-04 PFAM: PF00583; Acetyltransferase (GNAT) family; E=1.7e-26; acetyltransferase 4094009 1792963 RB7615 Rhodopirellula baltica SH 1 acetyltransferase NP_867920.2 4093593 R 243090 CDS NP_867921.1 32474927 1793485 complement(4094087..4094752) 1 NC_005027.1 PMID: 99120557 best DB hits: BLAST: pir:G71971; hypothetical protein jhp0125 - Helicobacter pylori; E=9e-04 pir:T36430; hypothetical protein SCF43A.07 - Streptomyces coelicolor; E=0.002 pir:A64537; hypothetical protein HP0137 - Helicobacter pylori; E=0.003 COG: jhp0125; COG1556 Uncharacterized ACR; E=8e-05 APE0258; COG1139 Uncharacterized conserved protein containing a; E=0.007 ykgG; COG1556 Uncharacterized ACR; E=0.009 PFAM: PF02589; Uncharacterized ACR, YkgG family COG; E=2.3e-07; hypothetical protein 4094752 1793485 RB7616 Rhodopirellula baltica SH 1 hypothetical protein NP_867921.1 4094087 R 243090 CDS NP_867922.1 32474928 1791107 complement(4094692..4096143) 1 NC_005027.1 PMID: 97426617 PMID: 9278503 best DB hits: BLAST: swissprot:P77536; YKGF_ECOLI HYPOTHETICAL 53.1 KD PROTEIN IN; E=5e-89 gb:AAG54641.1; AE005208_9 (AE005208) orf, hypothetical protein; E=9e-89 pir:T36429; probable iron-sulfur protein SCF43A.06 [similarity] -; E=1e-86 COG: ykgF; COG1139 Uncharacterized conserved protein containing a; E=5e-90 AF0506; COG0247 Fe-S oxidoreductases; E=2e-05 PFAM: PF00037; 4Fe-4S binding domain; E=0.43; electron transport protein ykgF- 4Fe-4S containing oxidoreductase 4096143 1791107 RB7618 Rhodopirellula baltica SH 1 electron transport protein ykgF- 4Fe-4S containing oxidoreductase NP_867922.1 4094692 R 243090 CDS NP_867923.1 32474929 1796737 complement(4096174..4097010) 1 NC_005027.1 best DB hits: BLAST: pir:T36428; hypothetical protein SCF43A.05 - Streptomyces coelicolor; E=3e-48 ddbj:BAB05551.1; (AP001513) glycolate oxidase [Bacillus; E=1e-39 pir:H75337; fumarate reductase-related protein - Deinococcus; E=7e-39 COG: BH1832; COG0247 Fe-S oxidoreductases; E=1e-40 MJ0863; COG2048 Heterodisulfide reductase subunit B; E=1e-05 MJ0092_2; COG0247 Fe-S oxidoreductases; E=7e-05 PFAM: PF02754; Domain of unknown function (DUF224); E=9.2e-10; Fe-S oxidoreductase 4097010 1796737 RB7619 Rhodopirellula baltica SH 1 Fe-S oxidoreductase NP_867923.1 4096174 R 243090 CDS NP_867924.1 32474930 1795053 complement(4096965..4097114) 1 NC_005027.1 hypothetical protein 4097114 1795053 RB7620 Rhodopirellula baltica SH 1 hypothetical protein NP_867924.1 4096965 R 243090 CDS NP_867925.1 32474931 1795464 4097160..4098164 1 NC_005027.1 best DB hits: BLAST: swissprot:Q57699; FER5_METJA FERREDOXIN MJ0251 -----; E=8e-10 pir:B72286; ferredoxin - Thermotoga maritima (strain MSB8) -----; E=9e-09 pir:B72206; ferredoxin - Thermotoga maritima (strain MSB8) -----; E=1e-05 COG: MJ0251; COG1146 Ferredoxin 3; E=7e-11 TM1292; COG1149 MinD superfamily P-loop ATPase containing an; E=0.002 AF0427; COG1146 Ferredoxin 3; E=0.004 PFAM: PF00037; 4Fe-4S binding domain; E=0.0025; Fe-S oxidoreductase 4098164 1795464 RB7621 Rhodopirellula baltica SH 1 Fe-S oxidoreductase NP_867925.1 4097160 D 243090 CDS NP_867926.2 161579029 1794399 complement(4098290..4099714) 1 NC_005027.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 4099714 fumC 1794399 fumC Rhodopirellula baltica SH 1 fumarate hydratase NP_867926.2 4098290 R 243090 CDS NP_867927.1 32474933 1792191 4099907..4101862 1 NC_005027.1 PMID: 9658018 best DB hits: BLAST: swissprot:P39344; IDNT_ECOLI GNT-II SYSTEM L-IDONATE TRANSPORTER; E=1e-14 ddbj:BAA83912.1; (AB024550) GNTP [Bacillus halodurans] -----; E=1e-14 swissprot:Q9ZIJ1; GNUT_PSEAE GLUCONATE PERMEASE ----- pir:; E=4e-12 COG: BH0805; COG2610 H+/gluconate symporter and related permeases; E=1e-15 PFAM: PF02447; GntP family permease; E=2.5e-34; Gnt-II system L-idonate transporter 4101862 idnT 1792191 idnT Rhodopirellula baltica SH 1 Gnt-II system L-idonate transporter NP_867927.1 4099907 D 243090 CDS NP_867928.1 32474934 1794150 complement(4101843..4102148) 1 NC_005027.1 hypothetical protein 4102148 1794150 RB7626 Rhodopirellula baltica SH 1 hypothetical protein NP_867928.1 4101843 R 243090 CDS NP_867929.1 32474935 1796060 complement(4102093..4103661) 1 NC_005027.1 best DB hits: BLAST: gb:AAF34762.1; AF228345_1 (AF228345) unknown [Listeria; E=6e-93 ddbj:BAB06097.1; (AP001515) BH2378~unknown conserved protein; E=2e-91 pir:F69884; conserved hypothetical protein ymdA - Bacillus subtilis; E=1e-89 COG: BH2378; COG1418 Predicted HD superfamily hydrolase; E=2e-92 PFAM: PF00261; Tropomyosin; E=0.57 PF00013; KH domain; E=6.3e-07 PF01966; HD domain; E=3.4e-21; signal transduction protein 4103661 1796060 RB7627 Rhodopirellula baltica SH 1 signal transduction protein NP_867929.1 4102093 R 243090 CDS NP_867930.1 32474936 1792213 complement(4103661..4104029) 1 NC_005027.1 hypothetical protein 4104029 1792213 RB7628 Rhodopirellula baltica SH 1 hypothetical protein NP_867930.1 4103661 R 243090 CDS NP_867931.1 32474937 1791699 4103944..4105137 1 NC_005027.1 PMID: 99061957 best DB hits: BLAST: pir:T31465; cell cycle protein homolog mesJ - Heliobacillus mobilis; E=1e-31 swissprot:Q9WZ48; Y579_THEMA HYPOTHETICAL PROTEIN TM0579 -----; E=7e-24 pir:F75424; probable cell cycle protein MesJcytosine; E=2e-21 COG: TM0579; COG0037 Predicted ATPase of the PP-loop superfamily; E=6e-25 mesJ; COG0037 Predicted ATPase of the PP-loop superfamily implicated; E=1e-17 TP0373; COG0037 Predicted ATPase of the PP-loop superfamily; E=6e-17 PFAM: PF01171; Uncharacterized protein family UPF00; E=0.044; cell cycle protein homolog mesJ 4105137 mesJ 1791699 mesJ Rhodopirellula baltica SH 1 cell cycle protein homolog mesJ NP_867931.1 4103944 D 243090 CDS NP_867932.1 32474938 1793395 4105185..4105418 1 NC_005027.1 hypothetical protein 4105418 1793395 RB7631 Rhodopirellula baltica SH 1 hypothetical protein NP_867932.1 4105185 D 243090 CDS NP_867933.1 32474939 1793724 complement(4105304..4105450) 1 NC_005027.1 hypothetical protein 4105450 1793724 RB7632 Rhodopirellula baltica SH 1 hypothetical protein NP_867933.1 4105304 R 243090 CDS NP_867934.1 32474940 1795352 4105449..4106270 1 NC_005027.1 best DB hits: BLAST: pir:C69049; ABC transporter (ATP-binding protein) - Methanobacterium; E=5e-47 swissprot:P46903; NATA_BACSU ATP-BINDING TRANSPORT PROTEIN NATA; E=2e-46 pir:F82572; sodium ABC transporter ATP-binding protein XF2329; E=5e-46 COG: MTH1370; COG1131 ABC-type multidrug transport system, ATPase; E=5e-48 PFAM: PF02223; Thymidylate kinase; E=0.42 PF00005; ABC transporter; E=1.6e-61; sodium ABC transporter ATP-binding protein 4106270 natA 1795352 natA Rhodopirellula baltica SH 1 sodium ABC transporter ATP-binding protein NP_867934.1 4105449 D 243090 CDS NP_867935.1 32474941 1792399 4106267..4108588 1 NC_005027.1 best DB hits: BLAST: pir:A75459; sodium extrusion protein NatB - Deinococcus radiodurans; E=2e-15 swissprot:P46904; NATB_BACSU PROTEIN NATB ----- pir: B69666; E=1e-10 ddbj:BAA22237.1; (AB000617) NatB [Bacillus subtilis]; E=5e-05 COG: DR0926; COG1668 ATP-dependent Na+ efflux pump membrane component; E=1e-16 BS_ydiL; COG1266 Predicted metal-dependent membrane protease; E=1e-04 PFAM: PF02517; CAAX amino terminal protease; E=1.1e-19; sodium extrusion protein NatB 4108588 natB 1792399 natB Rhodopirellula baltica SH 1 sodium extrusion protein NatB NP_867935.1 4106267 D 243090 CDS NP_867936.1 32474942 1792220 complement(4108602..4110038) 1 NC_005027.1 hypothetical protein 4110038 1792220 RB7637 Rhodopirellula baltica SH 1 hypothetical protein NP_867936.1 4108602 R 243090 CDS NP_867937.1 32474943 1791697 4109953..4110333 1 NC_005027.1 hypothetical protein 4110333 1791697 RB7638 Rhodopirellula baltica SH 1 hypothetical protein NP_867937.1 4109953 D 243090 CDS NP_867938.1 32474944 1796509 complement(4110356..4110484) 1 NC_005027.1 hypothetical protein 4110484 1796509 RB7641 Rhodopirellula baltica SH 1 hypothetical protein NP_867938.1 4110356 R 243090 CDS NP_867939.1 32474945 1794864 complement(4110498..4111352) 1 NC_005027.1 best DB hits: BLAST: pir:S74796; hypothetical protein sll1020 - Synechocystis sp. (strain; E=2e-34 pir:A75176; dolichyl-phosphate mannose synthase related protein; E=1e-20 pir:D71038; hypothetical protein PH1596 - Pyrococcus horikoshii; E=2e-19 COG: sll1020; COG0463 Glycosyltransferases involved in cell wall; E=2e-35 PFAM: PF00535; Glycosyl transferase; E=1.3e-41; dolichyl-phosphate hexose synthase 4111352 1794864 RB7643 Rhodopirellula baltica SH 1 dolichyl-phosphate hexose synthase NP_867939.1 4110498 R 243090 CDS NP_867940.1 32474946 1790956 complement(4111483..4111716) 1 NC_005027.1 hypothetical protein 4111716 1790956 RB7645 Rhodopirellula baltica SH 1 hypothetical protein NP_867940.1 4111483 R 243090 CDS NP_867941.1 32474947 1795277 4111735..4111923 1 NC_005027.1 hypothetical protein 4111923 1795277 RB7646 Rhodopirellula baltica SH 1 hypothetical protein NP_867941.1 4111735 D 243090 CDS NP_867942.1 32474948 1793064 4111931..4112152 1 NC_005027.1 hypothetical protein 4112152 1793064 RB7647 Rhodopirellula baltica SH 1 hypothetical protein NP_867942.1 4111931 D 243090 CDS NP_867943.1 32474949 1791673 complement(4112085..4112402) 1 NC_005027.1 hypothetical protein 4112402 1791673 RB7648 Rhodopirellula baltica SH 1 hypothetical protein NP_867943.1 4112085 R 243090 CDS NP_867944.1 32474950 1796663 complement(4112093..4112386) 1 NC_005027.1 hypothetical protein 4112386 1796663 RB7649 Rhodopirellula baltica SH 1 hypothetical protein NP_867944.1 4112093 R 243090 CDS NP_867945.1 32474951 1794943 complement(4112383..4112517) 1 NC_005027.1 hypothetical protein 4112517 1794943 RB7651 Rhodopirellula baltica SH 1 hypothetical protein NP_867945.1 4112383 R 243090 CDS NP_867946.1 32474952 1794536 4112505..4113452 1 NC_005027.1 PMID: 8661927 PMID: 3133356 best DB hits: BLAST: swissprot:P80040; MDH_CHLAU MALATE DEHYDROGENASE ----- embl:; E=3e-86 swissprot:Q9X4K8; MDH_BACTC MALATE DEHYDROGENASE ----- gb:; E=1e-83 swissprot:Q59202; MDH_BACIS MALATE DEHYDROGENASE ----- pir:; E=1e-83 COG: BH3158; COG0039 Malate/lactate dehydrogenases; E=3e-81 PFAM: PF00984; UDP-glucose/GDP-mannose dehydro; E=0.28 PF00056; lactate/malate dehydrogenase, N; E=1.3e-43 PF02866; lactate/malate dehydrogenase, a; E=1.5e-41; malate dehydrogenase 4113452 mdh 1794536 mdh Rhodopirellula baltica SH 1 malate dehydrogenase NP_867946.1 4112505 D 243090 CDS NP_867947.1 32474953 1795461 complement(4113482..4113631) 1 NC_005027.1 hypothetical protein 4113631 1795461 RB7655 Rhodopirellula baltica SH 1 hypothetical protein NP_867947.1 4113482 R 243090 CDS NP_867948.1 32474954 1796330 4113652..4114290 1 NC_005027.1 best DB hits: PFAM: PF02432; Fimbrial, major and minor subuni; E=0.17; signal peptide 4114290 1796330 RB7658 Rhodopirellula baltica SH 1 signal peptide NP_867948.1 4113652 D 243090 CDS NP_867949.1 32474955 1794036 4114441..4115529 1 NC_005027.1 PMID: 1400209 best DB hits: BLAST: swissprot:P73807; HIS8_SYNY3 HISTIDINOL-PHOSPHATE AMINOTRANSFERASE; E=1e-56 swissprot:P45358; HIS8_ACEXY HISTIDINOL-PHOSPHATE AMINOTRANSFERASE; E=2e-52 gb:AAK00147.1; AF222753_2 (AF222753) aminotransferase; E=2e-43 COG: sll1958; COG0079 Histidinol-phosphate aminotransferase/Tyrosine; E=1e-57 PFAM: PF00155; Aminotransferase class-I; E=5.1e-06 PF00222; Aminotransferase class-II; E=1.3e-17; histidinol-phosphate aminotransferase 4115529 hisC 1794036 hisC Rhodopirellula baltica SH 1 histidinol-phosphate aminotransferase NP_867949.1 4114441 D 243090 CDS NP_867950.1 32474956 1791326 4115526..4116134 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB07300.1; (AP001519) imidazoleglycerol-phosphate; E=3e-49 swissprot:O33564; HIS7_RHOSH IMIDAZOLEGLYCEROL-PHOSPHATE; E=1e-48 swissprot:P34047; HIS7_ARATH IMIDAZOLEGLYCEROL-PHOSPHATE; E=2e-48 COG: BH3581; COG0131 Imidazoleglycerol-phosphate dehydratase; E=3e-50 PFAM: PF00475; Imidazoleglycerol-phosphate dehydrat; E=7e-96; imidazoleglycerol-phosphate dehydratase 4116134 hisBD 1791326 hisBD Rhodopirellula baltica SH 1 imidazoleglycerol-phosphate dehydratase NP_867950.1 4115526 D 243090 CDS NP_867951.1 32474957 1794269 complement(4116230..4116733) 1 NC_005027.1 best DB hits: BLAST: swissprot:O83845; Y875_TREPA HYPOTHETICAL PROTEIN TP0875 -----; E=1e-09 pir:H72229; conserved hypothetical protein - Thermotoga maritima; E=2e-08 ddbj:BAB04264.1; (AP001508) BH0545~unknown conserved protein; E=1e-05 COG: TP0875; COG0802 Predicted ATPase or kinase; E=1e-10 PFAM: PF02367; Uncharacterised P-loop hydrolase UPF; E=3.9e-22; hypothetical protein 4116733 1794269 RB7663 Rhodopirellula baltica SH 1 hypothetical protein NP_867951.1 4116230 R 243090 CDS NP_867952.1 32474958 1792018 4116710..4116979 1 NC_005027.1 hypothetical protein 4116979 1792018 RB7665 Rhodopirellula baltica SH 1 hypothetical protein NP_867952.1 4116710 D 243090 CDS NP_867953.1 32474959 1790580 complement(4116766..4116984) 1 NC_005027.1 hypothetical protein 4116984 1790580 RB7666 Rhodopirellula baltica SH 1 hypothetical protein NP_867953.1 4116766 R 243090 CDS NP_867954.1 32474960 1796431 complement(4116981..4117097) 1 NC_005027.1 hypothetical protein 4117097 1796431 RB7667 Rhodopirellula baltica SH 1 hypothetical protein NP_867954.1 4116981 R 243090 CDS NP_867955.1 32474961 1793508 4117114..4117797 1 NC_005027.1 PMID: 8547819 best DB hits: BLAST: swissprot:P45458; MASY_SOYBN MALATE SYNTHASE, GLYOXYSOMAL (MS); E=0.60; malate synthase 4117797 1793508 RB7668 Rhodopirellula baltica SH 1 malate synthase NP_867955.1 4117114 D 243090 CDS NP_867956.1 32474962 1797159 4117946..4119253 1 NC_005027.1 hypothetical protein 4119253 1797159 RB7672 Rhodopirellula baltica SH 1 hypothetical protein NP_867956.1 4117946 D 243090 CDS NP_867957.1 32474963 1791542 complement(4119234..4120808) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB05075.1; (AP001511) BH1356~unknown conserved protein; E=1e-25 swissprot:P54465; YQEZ_BACSU HYPOTHETICAL 46.5 KD PROTEIN IN; E=6e-22 gb:AAB89465.1; (AE000979) nodulation protein NfeD (nfeD); E=8e-04 COG: BH1356_1; COG1030 Periplasmic serine proteases (ClpP class); E=1e-17 BH1356_2; COG1585 Membrane protein implicated in regulation of; E=1e-07 AF1781_1; COG1030 Periplasmic serine proteases (ClpP class); E=7e-05 PFAM: PF01957; Protein of unknown function DUF107; E=0.53; periplasmatic serine protease 4120808 1791542 RB7673 Rhodopirellula baltica SH 1 periplasmatic serine protease NP_867957.1 4119234 R 243090 CDS NP_867958.1 32474964 1796023 complement(4120780..4122597) 1 NC_005027.1 PMID: 7896723 best DB hits: BLAST: gb:AAB90400.1; (AE001046) TRK potassium uptake system protein; E=8e-61 pir:G82037; potassium uptake protein TrkH VC2756 [imported] - Vibrio; E=4e-49 swissprot:P44843; TRKH_HAEIN TRK SYSTEM POTASSIUM UPTAKE PROTEIN; E=1e-46 COG: AF0839; COG0168 Trk-type K+ transport systems, membrane components; E=8e-62 NMB0661_2; COG0168 Trk-type K+ transport systems, membrane; E=1e-36 PA3210; COG0168 Trk-type K+ transport systems, membrane components; E=1e-36 PFAM: PF02386; Sodium transport protein; E=1.1e-54; TRK potassium uptake system protein (trkH) 4122597 trkH 1796023 trkH Rhodopirellula baltica SH 1 TRK potassium uptake system protein (trkH) NP_867958.1 4120780 R 243090 CDS NP_867959.1 32474965 1796397 complement(4122659..4123339) 1 NC_005027.1 PMID: 8407791 best DB hits: BLAST: pir:E83626; protocatechuate 3,4-dioxygenase, beta subunit PA0153; E=1e-14 pir:T35018; protocatechuate 3,4-dioxygenase beta chain -; E=1e-14 gb:AAF65837.1; AF253466_3 (AF253466) protocatechuate; E=3e-14 PFAM: PF00652; QXW lectin repeat; E=0.28 PF00775; Dioxygenase; E=3.6e-18; protocatechuate 3,4-dioxygenase subunit beta 4123339 pcxB 1796397 pcxB Rhodopirellula baltica SH 1 protocatechuate 3,4-dioxygenase subunit beta NP_867959.1 4122659 R 243090 CDS NP_867960.1 32474966 1790716 complement(4123209..4123523) 1 NC_005027.1 hypothetical protein 4123523 1790716 RB7681 Rhodopirellula baltica SH 1 hypothetical protein NP_867960.1 4123209 R 243090 CDS NP_867961.1 32474967 1792964 4123608..4125095 1 NC_005027.1 hypothetical protein 4125095 1792964 RB7682 Rhodopirellula baltica SH 1 hypothetical protein NP_867961.1 4123608 D 243090 CDS NP_867962.1 32474968 1795878 4125274..4125573 1 NC_005027.1 hypothetical protein 4125573 1795878 RB7684 Rhodopirellula baltica SH 1 hypothetical protein NP_867962.1 4125274 D 243090 CDS NP_867963.1 32474969 1793332 4125633..4126799 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein 4126799 1793332 RB7685 Rhodopirellula baltica SH 1 hypothetical protein NP_867963.1 4125633 D 243090 CDS NP_867964.1 32474970 1796486 4126912..4127307 1 NC_005027.1 hypothetical protein 4127307 1796486 RB7688 Rhodopirellula baltica SH 1 hypothetical protein NP_867964.1 4126912 D 243090 CDS NP_867965.1 32474971 1796981 4127213..4127620 1 NC_005027.1 signal peptide 4127620 1796981 RB7689 Rhodopirellula baltica SH 1 signal peptide NP_867965.1 4127213 D 243090 CDS NP_867966.1 32474972 1794804 4127641..4128903 1 NC_005027.1 PMID: 8063110 PMID: 8195067 PMID: 9808046 PMID: 11372197 best DB hits: BLAST: gb:AAD05531.1; (AF083240) c-type cytochrome precursor [Shewanella; E=0.74 swissprot:Q57142; C554_NITEU CYTOCHROME C-554 PRECURSOR (C554); E=0.84; c-type cytochrome precursor- periplasmic heme binding protein 4128903 1794804 RB7692 Rhodopirellula baltica SH 1 c-type cytochrome precursor- periplasmic heme binding protein NP_867966.1 4127641 D 243090 CDS NP_867967.1 32474973 1791056 4128786..4130045 1 NC_005027.1 hypothetical protein 4130045 1791056 RB7694 Rhodopirellula baltica SH 1 hypothetical protein NP_867967.1 4128786 D 243090 CDS NP_867968.1 32474974 1793886 4130042..4131289 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB05140.1; (AP001512) BH1421~unknown conserved protein; E=0.16; hypothetical protein 4131289 1793886 RB7698 Rhodopirellula baltica SH 1 hypothetical protein NP_867968.1 4130042 D 243090 CDS NP_867969.1 32474975 1796445 complement(4131286..4131441) 1 NC_005027.1 hypothetical protein 4131441 1796445 RB7700 Rhodopirellula baltica SH 1 hypothetical protein NP_867969.1 4131286 R 243090 CDS NP_867970.1 32474976 1795674 4131412..4131519 1 NC_005027.1 hypothetical protein 4131519 1795674 RB7701 Rhodopirellula baltica SH 1 hypothetical protein NP_867970.1 4131412 D 243090 CDS NP_867971.1 32474977 1790920 4131608..4131814 1 NC_005027.1 hypothetical protein 4131814 1790920 RB7702 Rhodopirellula baltica SH 1 hypothetical protein NP_867971.1 4131608 D 243090 CDS NP_867972.1 32474978 1795439 4131842..4132138 1 NC_005027.1 hypothetical protein 4132138 1795439 RB7703 Rhodopirellula baltica SH 1 hypothetical protein NP_867972.1 4131842 D 243090 CDS NP_867973.1 32474979 1796354 complement(4132107..4132631) 1 NC_005027.1 PMID: 8361352 best DB hits: BLAST: pir:H69658; molybdopterin precursor biosynthesis moaB - Bacillus; E=9e-25 ddbj:BAB06741.1; (AP001517) molybdopterin precursor biosynthesis; E=4e-22 gb:AAG20033.1; (AE005084) molybdenum cofactor biosynthesis; E=7e-21 COG: BS_moaB; COG0521 Molybdopterin biosynthesis enzymes; E=9e-26 PFAM: PF00994; Molybdenum cofactor biosynthesi; E=0.062; molybdopterin precursor biosynthesis moaB 4132631 moaB 1796354 moaB Rhodopirellula baltica SH 1 molybdopterin precursor biosynthesis moaB NP_867973.1 4132107 R 243090 CDS NP_867974.1 32474980 1794143 complement(4132628..4134397) 1 NC_005027.1 PMID: 20175229 best DB hits: BLAST: ddbj:BAB03332.1; (AB035450) fructose specific permease; E=3e-07 pir:H69626; PTS fructose-specific enzyme IIBC component fruA -; E=5e-07 pir:B81941; probable regulatory protein NMA0946 [imported] -; E=9e-07 COG: BS_fruA_1; COG1762 Phosphotransferase system; E=5e-08 TP0755; COG1762 Phosphotransferase system mannitol/fructose-specific; E=6e-07 VC1826_1; COG1762 Phosphotransferase system; E=8e-07; fructose specific permease 4134397 ptfA 1794143 ptfA Rhodopirellula baltica SH 1 fructose specific permease NP_867974.1 4132628 R 243090 CDS NP_867975.1 32474981 1792863 complement(4134343..4134747) 1 NC_005027.1 hypothetical protein 4134747 1792863 RB7709 Rhodopirellula baltica SH 1 hypothetical protein NP_867975.1 4134343 R 243090 CDS NP_867976.1 32474982 1797190 complement(4134606..4134917) 1 NC_005027.1 hypothetical protein 4134917 1797190 RB7710 Rhodopirellula baltica SH 1 hypothetical protein NP_867976.1 4134606 R 243090 CDS NP_867977.1 32474983 1795955 4134709..4134894 1 NC_005027.1 hypothetical protein 4134894 1795955 RB7711 Rhodopirellula baltica SH 1 hypothetical protein NP_867977.1 4134709 D 243090 CDS NP_867978.1 32474984 1791895 4134885..4135025 1 NC_005027.1 hypothetical protein 4135025 1791895 RB7712 Rhodopirellula baltica SH 1 hypothetical protein NP_867978.1 4134885 D 243090 CDS NP_867979.1 32474985 1791372 complement(4134987..4135688) 1 NC_005027.1 signal peptide 4135688 1791372 RB7713 Rhodopirellula baltica SH 1 signal peptide NP_867979.1 4134987 R 243090 CDS NP_867980.1 32474986 1796436 complement(4135754..4135918) 1 NC_005027.1 hypothetical protein 4135918 1796436 RB7714 Rhodopirellula baltica SH 1 hypothetical protein NP_867980.1 4135754 R 243090 CDS NP_867981.1 32474987 1792229 4135891..4136097 1 NC_005027.1 hypothetical protein 4136097 1792229 RB7716 Rhodopirellula baltica SH 1 hypothetical protein NP_867981.1 4135891 D 243090 CDS NP_867982.1 32474988 1796333 4136155..4136316 1 NC_005027.1 hypothetical protein 4136316 1796333 RB7717 Rhodopirellula baltica SH 1 hypothetical protein NP_867982.1 4136155 D 243090 CDS NP_867983.1 32474989 1796715 complement(4136242..4136418) 1 NC_005027.1 hypothetical protein 4136418 1796715 RB7718 Rhodopirellula baltica SH 1 hypothetical protein NP_867983.1 4136242 R 243090 CDS NP_867984.1 32474990 1790162 complement(4136415..4137251) 1 NC_005027.1 hypothetical protein 4137251 1790162 RB7722 Rhodopirellula baltica SH 1 hypothetical protein NP_867984.1 4136415 R 243090 CDS NP_867985.1 32474991 1795100 4137186..4137386 1 NC_005027.1 hypothetical protein 4137386 1795100 RB7723 Rhodopirellula baltica SH 1 hypothetical protein NP_867985.1 4137186 D 243090 CDS NP_867986.1 32474992 1796571 complement(4137563..4138534) 1 NC_005027.1 hypothetical protein 4138534 1796571 RB7726 Rhodopirellula baltica SH 1 hypothetical protein NP_867986.1 4137563 R 243090 CDS NP_867987.1 32474993 1797192 4138569..4138811 1 NC_005027.1 hypothetical protein 4138811 1797192 RB7727 Rhodopirellula baltica SH 1 hypothetical protein NP_867987.1 4138569 D 243090 CDS NP_867988.1 32474994 1790219 complement(4138779..4139270) 1 NC_005027.1 signal peptide 4139270 1790219 RB7728 Rhodopirellula baltica SH 1 signal peptide NP_867988.1 4138779 R 243090 CDS NP_867989.1 32474995 1796575 complement(4139239..4139523) 1 NC_005027.1 hypothetical protein 4139523 1796575 RB7729 Rhodopirellula baltica SH 1 hypothetical protein NP_867989.1 4139239 R 243090 CDS NP_867990.1 32474996 1790361 complement(4139598..4140044) 1 NC_005027.1 hypothetical protein 4140044 1790361 RB7730 Rhodopirellula baltica SH 1 hypothetical protein NP_867990.1 4139598 R 243090 CDS NP_867991.1 32474997 1792950 complement(4140162..4140488) 1 NC_005027.1 hypothetical protein 4140488 1792950 RB7731 Rhodopirellula baltica SH 1 hypothetical protein NP_867991.1 4140162 R 243090 CDS NP_867992.1 32474998 1790906 complement(4140525..4140734) 1 NC_005027.1 hypothetical protein 4140734 1790906 RB7733 Rhodopirellula baltica SH 1 hypothetical protein NP_867992.1 4140525 R 243090 CDS NP_867993.1 32474999 1790896 4140699..4142543 1 NC_005027.1 hypothetical protein 4142543 1790896 RB7734 Rhodopirellula baltica SH 1 hypothetical protein NP_867993.1 4140699 D 243090 CDS NP_867994.1 32475000 1792876 complement(4142604..4142771) 1 NC_005027.1 hypothetical protein 4142771 1792876 RB7736 Rhodopirellula baltica SH 1 hypothetical protein NP_867994.1 4142604 R 243090 CDS NP_867995.1 32475001 1793830 complement(4142861..4143112) 1 NC_005027.1 hypothetical protein 4143112 1793830 RB7737 Rhodopirellula baltica SH 1 hypothetical protein NP_867995.1 4142861 R 243090 CDS NP_867996.1 32475002 1791744 complement(4143120..4144664) 1 NC_005027.1 hypothetical protein 4144664 1791744 RB7739 Rhodopirellula baltica SH 1 hypothetical protein NP_867996.1 4143120 R 243090 CDS NP_867997.1 32475003 1793219 4144689..4144817 1 NC_005027.1 hypothetical protein 4144817 1793219 RB7741 Rhodopirellula baltica SH 1 hypothetical protein NP_867997.1 4144689 D 243090 CDS NP_867998.1 32475004 1793145 complement(4144793..4145209) 1 NC_005027.1 hypothetical protein 4145209 1793145 RB7742 Rhodopirellula baltica SH 1 hypothetical protein NP_867998.1 4144793 R 243090 CDS NP_867999.1 32475005 1794664 complement(4145254..4146072) 1 NC_005027.1 PMID: 20175755 best DB hits: BLAST: embl:CAB72079.1; (AJ391284) hypothetical protein [Neisseria; E=0.028 pir:D81191; hypothetical protein NMB0509 [imported] - Neisseria; E=0.028; hypothetical protein 4146072 1794664 RB7743 Rhodopirellula baltica SH 1 hypothetical protein NP_867999.1 4145254 R 243090 CDS NP_868000.1 32475006 1790113 complement(4146120..4146569) 1 NC_005027.1 hypothetical protein 4146569 1790113 RB7744 Rhodopirellula baltica SH 1 hypothetical protein NP_868000.1 4146120 R 243090 CDS NP_868001.1 32475007 1795970 4146480..4149623 1 NC_005027.1 PMID: 11158351 best DB hits: BLAST: ddbj:BAA36466.1; (AB015053) serine protease homologue; E=1e-19 gb:AAF80995.1; (AF216702) PrtB [Pseudomonas fluorescens]; E=5e-19 pir:JC5568; serine proteinase h1 (EC 3.4.-.-) precursor - Serratia; E=4e-18 COG: PA3535_1; COG1404 Subtilisin-like serine proteases; E=3e-10 PFAM: PF02223; Thymidylate kinase; E=0.27; serine protease homologue- secreted serine protease 4149623 prtB 1795970 prtB Rhodopirellula baltica SH 1 serine protease homologue- secreted serine protease NP_868001.1 4146480 D 243090 CDS NP_868002.1 32475008 1796279 complement(4149694..4150269) 1 NC_005027.1 best DB hits: BLAST: pir:B70535; probable sulfatase (EC 3.1.6.-) atsD - Mycobacterium; E=7e-11 pir:E70533; probable sulfatase (EC 3.1.6.-) atsB - Mycobacterium; E=4e-08 pir:B70643; probable sulfatase (EC 3.1.6.-) atsA - Mycobacterium; E=0.22 COG: Rv0663; COG3119 Arylsulfatase A and related enzymes; E=7e-12; sulfatase atsD 4150269 1796279 RB7746 Rhodopirellula baltica SH 1 sulfatase atsD NP_868002.1 4149694 R 243090 CDS NP_868003.1 32475009 1790998 4150256..4150549 1 NC_005027.1 hypothetical protein 4150549 1790998 RB7747 Rhodopirellula baltica SH 1 hypothetical protein NP_868003.1 4150256 D 243090 CDS NP_868004.1 32475010 1793859 4150491..4150715 1 NC_005027.1 hypothetical protein 4150715 1793859 RB7748 Rhodopirellula baltica SH 1 hypothetical protein NP_868004.1 4150491 D 243090 CDS NP_868005.1 32475011 1794619 complement(4150677..4150979) 1 NC_005027.1 hypothetical protein 4150979 1794619 RB7749 Rhodopirellula baltica SH 1 hypothetical protein NP_868005.1 4150677 R 243090 CDS NP_868006.1 32475012 1793872 complement(4151023..4152765) 1 NC_005027.1 PMID: 20365717 best DB hits: BLAST: pir:H82841; conserved hypothetical protein XF0161 [imported] -; E=1e-06 gb:AAB48483.1; (U87814) PEST phosphatase interacting protein [Mus; E=0.060 embl:CAB99171.1; (AL390189) related to transport protein USO1; E=0.15; hypothetical protein 4152765 1793872 RB7750 Rhodopirellula baltica SH 1 hypothetical protein NP_868006.1 4151023 R 243090 CDS NP_868007.1 32475013 1790977 complement(4152765..4153019) 1 NC_005027.1 hypothetical protein 4153019 1790977 RB7752 Rhodopirellula baltica SH 1 hypothetical protein NP_868007.1 4152765 R 243090 CDS NP_868008.1 32475014 1793808 complement(4153022..4153987) 1 NC_005027.1 hypothetical protein 4153987 1793808 RB7753 Rhodopirellula baltica SH 1 hypothetical protein NP_868008.1 4153022 R 243090 CDS NP_868009.1 32475015 1791937 complement(4154033..4154398) 1 NC_005027.1 PMID: 7642487 best DB hits: BLAST: pir:E72348; conserved hypothetical protein - Thermotoga maritima; E=0.001 ddbj:BAB05844.1; (AP001514) transcriptional regulator of; E=0.006 swissprot:P06533; SINR_BACSU SINR PROTEIN ----- pir: B25159; E=0.010 COG: TM0656; COG1396 Predicted transcriptional regulators; E=1e-04 PFAM: PF01381; Helix-turn-helix; E=1.2e-07; transcriptional regulator 4154398 1791937 RB7754 Rhodopirellula baltica SH 1 transcriptional regulator NP_868009.1 4154033 R 243090 CDS NP_868010.1 32475016 1791731 4154446..4154631 1 NC_005027.1 hypothetical protein 4154631 1791731 RB7755 Rhodopirellula baltica SH 1 hypothetical protein NP_868010.1 4154446 D 243090 CDS NP_868011.1 32475017 1790194 complement(4154488..4154712) 1 NC_005027.1 hypothetical protein 4154712 1790194 RB7756 Rhodopirellula baltica SH 1 hypothetical protein NP_868011.1 4154488 R 243090 CDS NP_868012.1 32475018 1792297 complement(4154809..4155177) 1 NC_005027.1 PMID: 21101824 best DB hits: BLAST: gb:AAG60904.1; AF322013_23 (AF322013) ID479 [Bradyrhizobium; E=2e-04; hypothetical protein 4155177 1792297 RB7757 Rhodopirellula baltica SH 1 hypothetical protein NP_868012.1 4154809 R 243090 CDS NP_868013.1 32475019 1793397 4155419..4156051 1 NC_005027.1 hypothetical protein 4156051 1793397 RB7759 Rhodopirellula baltica SH 1 hypothetical protein NP_868013.1 4155419 D 243090 CDS NP_868014.1 32475020 1796117 complement(4155488..4156900) 1 NC_005027.1 hypothetical protein 4156900 1796117 RB7760 Rhodopirellula baltica SH 1 hypothetical protein NP_868014.1 4155488 R 243090 CDS NP_868015.1 32475021 1790313 complement(4156869..4159847) 1 NC_005027.1 PMID: 11157235 PMID: 10347025 PMID: 10966413 best DB hits: BLAST: ddbj:BAB21059.1; (AB037178) xanthan lyase [Bacillus sp. GL1]; E=5e-08 gb:AAG24953.1; AF242413_1 (AF242413) XalA [Paenibacillus; E=3e-07 gb:AAG42262.1; AF318176_1 (AF318176) xanthan lyase XalB; E=0.003; xanthan lyase 4159847 1790313 RB7762 Rhodopirellula baltica SH 1 xanthan lyase NP_868015.1 4156869 R 243090 CDS NP_868016.1 32475022 1792434 complement(4160044..4160757) 1 NC_005027.1 best DB hits: BLAST: pir:T32623; hypothetical protein F42A6.9 - Caenorhabditis elegans; E=0.39; hypothetical protein 4160757 1792434 RB7765 Rhodopirellula baltica SH 1 hypothetical protein NP_868016.1 4160044 R 243090 CDS NP_868017.1 32475023 1790019 complement(4160901..4162406) 1 NC_005027.1 PMID: 8020961 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=9e-25 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=2e-23 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=4e-23 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=1e-21 PFAM: PF00884; Sulfatase; E=3.8e-39; N-acetylgalactosamine 6-sulfate sulfatase (GALNS) 4162406 GALNS 1790019 GALNS Rhodopirellula baltica SH 1 N-acetylgalactosamine 6-sulfate sulfatase (GALNS) NP_868017.1 4160901 R 243090 CDS NP_868018.1 32475024 1796342 4162365..4162472 1 NC_005027.1 hypothetical protein 4162472 1796342 RB7771 Rhodopirellula baltica SH 1 hypothetical protein NP_868018.1 4162365 D 243090 CDS NP_868019.1 32475025 1795777 4162474..4164597 1 NC_005027.1 PMID: 7744061 best DB hits: BLAST: swissprot:P51691; ARS_PSEAE ARYLSULFATASE (ARYL-SULFATE; E=2e-61 pir:S69336; arylsulfatase (EC 3.1.6.1) - Pseudomonas aeruginosa; E=2e-60 pir:E70533; probable sulfatase (EC 3.1.6.-) atsB - Mycobacterium; E=7e-53 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=2e-62 PFAM: PF00884; Sulfatase; E=3.2e-77; arylsulfatase 4164597 atsA 1795777 atsA Rhodopirellula baltica SH 1 arylsulfatase NP_868019.1 4162474 D 243090 CDS NP_868020.1 32475026 1796608 4164594..4167062 1 NC_005027.1 PMID: 97000351 best DB hits: BLAST: embl:CAB62685.1; (AL133422) membrane protein.; E=6e-12 pir:A49911; NADH oxidase (hydrogen peroxide-forming) (EC 1.6.-.-) -; E=0.008 swissprot:P26829; DHNA_BACSP NADH DEHYDROGENASE (ALKYL; E=0.024 PFAM: PF01134; Glucose inhibited division prote; E=1.1e-05 PF00070; Pyridine nucleotide-disulphide o; E=1.1e-05 PF02032; Phytoene dehydrogenase related e; E=0.43; NADH-dependant oxidoreductase 4167062 1796608 RB7773 Rhodopirellula baltica SH 1 NADH-dependant oxidoreductase NP_868020.1 4164594 D 243090 CDS NP_868021.1 32475027 1793190 complement(4165560..4167398) 1 NC_005027.1 PMID: 20363099 best DB hits: BLAST: ddbj:BAB01977.1; (AP002065) gene_id:T31J18.6~pir F71651~similar; E=0.23; hypothetical protein 4167398 1793190 RB7775 Rhodopirellula baltica SH 1 hypothetical protein NP_868021.1 4165560 R 243090 CDS NP_868022.1 32475028 1795187 4167044..4168843 1 NC_005027.1 PMID: 20416234 best DB hits: BLAST: embl:CAB53350.1; (AJ010260) NosR protein [Paracoccus; E=0.001 gb:AAD09156.1; (AF047429) regulatory protein NosR [Achromobacter; E=0.001 embl:CAC03728.1; (AJ297529) RnfG protein [Pseudomonas stutzeri; E=0.094; NosR regulatory protein 4168843 nosR 1795187 nosR Rhodopirellula baltica SH 1 NosR regulatory protein NP_868022.1 4167044 D 243090 CDS NP_868023.1 32475029 1795376 complement(4168833..4170992) 1 NC_005027.1 PMID: 9523018 PMID: 8418825 best DB hits: BLAST: swissprot:P40137; CYAA_STIAU ADENYLATE CYCLASE 1 (ATP; E=8e-24 pir:S74929; adenylate cyclase (EC 4.6.1.1) - Synechocystis sp.; E=1e-23 ddbj:BAA13997.1; (D89622) adenylate cyclase [Anabaena sp.]; E=4e-23 COG: sll0646; COG2114 Adenylate cyclase, family 3 (some proteins contain; E=1e-24 slr1991_2; COG2114 Adenylate cyclase, family 3 (some proteins; E=3e-08 Rv1625c; COG2114 Adenylate cyclase, family 3 (some proteins contain; E=4e-08 PFAM: PF00211; Adenylate and Guanylate cyclase; E=2.7e-39; adenylate cyclase 4170992 cyaA 1795376 cyaA Rhodopirellula baltica SH 1 adenylate cyclase NP_868023.1 4168833 R 243090 CDS NP_868024.1 32475030 1793152 complement(4170800..4171828) 1 NC_005027.1 PMID: 20150912 PMID: 97000351 best DB hits: BLAST: pir:B81402; hypothetical protein Cj0554 [imported] - Campylobacter; E=4e-57 embl:CAB56667.1; (AL121596) hypothetical protein SCF51A.15c; E=4e-54; hypothetical protein 4171828 1793152 RB7785 Rhodopirellula baltica SH 1 hypothetical protein NP_868024.1 4170800 R 243090 CDS NP_868025.1 32475031 1796550 complement(4171854..4172318) 1 NC_005027.1 hypothetical protein 4172318 1796550 RB7786 Rhodopirellula baltica SH 1 hypothetical protein NP_868025.1 4171854 R 243090 CDS NP_868026.1 32475032 1792802 4172308..4173246 1 NC_005027.1 PMID: 8921895 best DB hits: BLAST: swissprot:P44677; TOLB_HAEIN TOLB PROTEIN PRECURSOR ----- pir:; E=0.67 pir:JC5213; tolB protein - Haemophilus influenzae ----- gb:; E=0.72; tolB protein [precursor] 4173246 1792802 RB7789 Rhodopirellula baltica SH 1 tolB protein [precursor] NP_868026.1 4172308 D 243090 CDS NP_868027.1 32475033 1791135 4173233..4173502 1 NC_005027.1 hypothetical protein 4173502 1791135 RB7790 Rhodopirellula baltica SH 1 hypothetical protein NP_868027.1 4173233 D 243090 CDS NP_868028.1 32475034 1790336 4173444..4175045 1 NC_005027.1 PMID: 12024217; hypothetical protein 4175045 1790336 RB7791 Rhodopirellula baltica SH 1 hypothetical protein NP_868028.1 4173444 D 243090 CDS NP_868029.1 32475035 1796302 complement(4173508..4174068) 1 NC_005027.1 signal peptide 4174068 1796302 RB7792 Rhodopirellula baltica SH 1 signal peptide NP_868029.1 4173508 R 243090 CDS NP_868030.1 32475036 1795164 4175197..4175742 1 NC_005027.1 PMID: 7961470 best DB hits: BLAST: swissprot:Q44583; NCCH_ALCXX RNA POLYMERASE SIGMA FACTOR NCCH; E=6e-07 pir:H82073; RNA polymerase sigma-E factor VC2467 [imported] - Vibrio; E=3e-06 embl:CAB55345.1; (AJ010584) ECF sigma factor [Streptomyces; E=2e-05 COG: VC2467; COG1595 DNA-directed RNA polymerase specialized sigma; E=3e-07 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=9.7e-11; RNA polymerase sigma factor nccH 4175742 nccH 1795164 nccH Rhodopirellula baltica SH 1 RNA polymerase sigma factor nccH NP_868030.1 4175197 D 243090 CDS NP_868031.1 32475037 1797214 4175770..4178583 1 NC_005027.1 PMID: 7774814 best DB hits: BLAST: embl:CAB94054.1; (AL358672) serinethreonine-protein; E=3e-29 pir:T35491; probable serinethreonine-specific protein kinase pkaF -; E=1e-25 gb:AAF79944.1; AF233851_2 (AF233851) eukaryotic-type; E=1e-25 COG: Rv0015c; COG0515 Serine/threonine protein kinases; E=3e-26 PFAM: PF00069; Protein kinase domain; E=7.1e-37; serine/threonine-protein kinase 4178583 pkn 1797214 pkn Rhodopirellula baltica SH 1 serine/threonine-protein kinase NP_868031.1 4175770 D 243090 CDS NP_868032.1 32475038 1792005 complement(4178548..4178730) 1 NC_005027.1 hypothetical protein 4178730 1792005 RB7799 Rhodopirellula baltica SH 1 hypothetical protein NP_868032.1 4178548 R 243090 CDS NP_868033.1 32475039 1797212 complement(4178948..4179349) 1 NC_005027.1 PMID: 11759840; hypothetical protein 4179349 1797212 RB7800 Rhodopirellula baltica SH 1 hypothetical protein NP_868033.1 4178948 R 243090 CDS NP_868034.1 32475040 1795772 complement(4179441..4180505) 1 NC_005027.1 hypothetical protein 4180505 1795772 RB7801 Rhodopirellula baltica SH 1 hypothetical protein NP_868034.1 4179441 R 243090 CDS NP_868035.1 32475041 1797152 complement(4180502..4182523) 1 NC_005027.1 best DB hits: BLAST: pir:D75432; uroporphyrinogen decarboxylase - Deinococcus radiodurans; E=2e-74 swissprot:Q9RV96; DCUP_DEIRA UROPORPHYRINOGEN DECARBOXYLASE; E=2e-74 swissprot:O69861; DCUP_STRCO UROPORPHYRINOGEN DECARBOXYLASE; E=1e-73 COG: DR1133; COG0407 Uroporphyrinogen-III decarboxylase; E=2e-75 Rv0260c_1; COG1587 Uroporphyrinogen-III synthase; E=7e-12 PFAM: PF02602; Uroporphyrinogen-III synthase HemD; E=4.3e-13 PF01208; Uroporphyrinogen decarboxylase (URO-; E=5.6e-144; uroporphyrinogen III synthase, uroporhyrinogen decarboxylase 4182523 uroD 1797152 uroD Rhodopirellula baltica SH 1 uroporphyrinogen III synthase, uroporhyrinogen decarboxylase NP_868035.1 4180502 R 243090 CDS NP_868036.1 32475042 1794343 4182504..4183319 1 NC_005027.1 best DB hits: BLAST: pir:B69997; conserved hypothetical protein ytmQ - Bacillus subtilis; E=1e-15 pir:G82761; conserved hypothetical protein XF0784 [imported] -; E=3e-15 gb:AAK04847.1; AE006308_7 (AE006308) HYPOTHETICAL PROTEIN; E=1e-14 COG: BS_ytmQ; COG0220 Predicted S-adenosylmethionine-dependent; E=1e-16 PFAM: PF02390; methyltransferase; E=2e-41; methyltransferase 4183319 1794343 RB7807 Rhodopirellula baltica SH 1 methyltransferase NP_868036.1 4182504 D 243090 CDS NP_868037.1 32475043 1792973 complement(4183621..4184409) 1 NC_005027.1 PMID: 98263372 best DB hits: BLAST: pir:B83395; probable enoyl-CoA hydrataseisomerase PA2013 [imported]; E=4e-17 pir:D72628; probable 3-hydroxybutyryl-CoA dehydratase APE1484 -; E=7e-16 gb:AAC24330.1; (AF029714) PhaB [Pseudomonas putida]; E=3e-14 COG: PA2013; COG1024 Enoyl-CoA hydratase/carnithine racemase; E=4e-18 PFAM: PF00378; Enoyl-CoA hydratase/isomerase; E=5.7e-27; enoyl-CoA hydratase 4184409 1792973 RB7812 Rhodopirellula baltica SH 1 enoyl-CoA hydratase NP_868037.1 4183621 R 243090 CDS NP_868038.1 32475044 1791401 complement(4184462..4185385) 1 NC_005027.1 PMID: 20437337 best DB hits: BLAST: pir:D83184; conserved hypothetical protein PA3683 [imported] -; E=4e-42 pir:E82234; conserved hypothetical protein VC1165 [imported] -; E=9e-42 swissprot:P37348; YECE_ECOLI HYPOTHETICAL 31.5 KD PROTEIN IN; E=1e-39 COG: PA3683; COG1801 Uncharacterized ACR; E=4e-43 PFAM: PF01904; Protein of unknown function D; E=1.6e-11; hypothetical protein 4185385 1791401 RB7813 Rhodopirellula baltica SH 1 hypothetical protein NP_868038.1 4184462 R 243090 CDS NP_868039.1 32475045 1791943 4185351..4185758 1 NC_005027.1 hypothetical protein 4185758 1791943 RB7815 Rhodopirellula baltica SH 1 hypothetical protein NP_868039.1 4185351 D 243090 CDS NP_868040.1 32475046 1791885 4185730..4186095 1 NC_005027.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 4186095 rpsL 1791885 rpsL Rhodopirellula baltica SH 1 30S ribosomal protein S12 NP_868040.1 4185730 D 243090 CDS NP_868041.1 32475047 1792604 4186170..4186643 1 NC_005027.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 4186643 rpsG 1792604 rpsG Rhodopirellula baltica SH 1 30S ribosomal protein S7 NP_868041.1 4186170 D 243090 CDS NP_868042.1 32475048 1792103 4186706..4188880 1 NC_005027.1 PMID: 8070396 PMID: 11054294 best DB hits: BLAST: embl:CAB81852.1; (AL161691) elongation factor G [Streptomyces; E=1e-147 swissprot:O66428; EFG_AQUAE ELONGATION FACTOR G (EF-G) -----; E=1e-145 swissprot:P38525; EFG_THEMA ELONGATION FACTOR G (EF-G) -----; E=1e-145 COG: aq_001; COG0480 Translation elongation and release factors (GTPases); E=1e-146 jhp1118; COG0480 Translation elongation and release factors; E=1e-139 BH0131; COG0480 Translation elongation and release factors (GTPases); E=1e-138 PFAM: PF01894; Uncharacterised protein family UPF; E=0.082 PF00009; Elongation factor Tu family; E=3.4e-123 PF00679; Elongation factor G C-terminus; E=1.2e-42; elongation factor G 4188880 fusA 1792103 fusA Rhodopirellula baltica SH 1 elongation factor G NP_868042.1 4186706 D 243090 CDS NP_868043.1 32475049 1790153 complement(4189064..4189612) 1 NC_005027.1 PMID: 20406833 best DB hits: BLAST: pir:G82206; hypothetical protein VC1375 [imported] - Vibrio cholerae; E=9e-09; hypothetical protein 4189612 1790153 RB7822 Rhodopirellula baltica SH 1 hypothetical protein NP_868043.1 4189064 R 243090 CDS NP_868044.1 32475050 1796383 complement(4189704..4191209) 1 NC_005027.1 PMID: 8907187 PMID: 10029535 best DB hits: BLAST: pir:D70479; probable transaminase (EC 2.6.1.-) aspC2 [similarity] -; E=1e-111 pir:E83056; probable aminotransferase PA4715 [imported] -; E=1e-100 swissprot:P77434; YFDZ_ECOLI HYPOTHETICAL AMINOTRANSFERASE YFDZ; E=4e-97 COG: aq_2094; COG0436 PLP-dependent aminotransferases; E=1e-112 PFAM: PF00155; Aminotransferase class-I; E=7.9e-34; transaminase 4191209 1796383 RB7823 Rhodopirellula baltica SH 1 transaminase NP_868044.1 4189704 R 243090 CDS NP_868045.1 32475051 1793448 complement(4191139..4191699) 1 NC_005027.1 hypothetical protein 4191699 1793448 RB7824 Rhodopirellula baltica SH 1 hypothetical protein NP_868045.1 4191139 R 243090 CDS NP_868046.1 32475052 1795509 complement(4191369..4191662) 1 NC_005027.1 hypothetical protein 4191662 1795509 RB7825 Rhodopirellula baltica SH 1 hypothetical protein NP_868046.1 4191369 R 243090 CDS NP_868047.1 32475053 1791445 complement(4191725..4191901) 1 NC_005027.1 hypothetical protein 4191901 1791445 RB7826 Rhodopirellula baltica SH 1 hypothetical protein NP_868047.1 4191725 R 243090 CDS NP_868048.1 32475054 1791457 4191785..4191946 1 NC_005027.1 hypothetical protein 4191946 1791457 RB7827 Rhodopirellula baltica SH 1 hypothetical protein NP_868048.1 4191785 D 243090 CDS NP_868049.1 32475055 1790463 complement(4191915..4192037) 1 NC_005027.1 hypothetical protein 4192037 1790463 RB7828 Rhodopirellula baltica SH 1 hypothetical protein NP_868049.1 4191915 R 243090 CDS NP_868050.1 32475056 1796618 4192031..4192357 1 NC_005027.1 PMID: 7037196 PMID: 3892488 PMID: 7007073 best DB hits: BLAST: swissprot:P44378; RS10_HAEIN 30S RIBOSOMAL PROTEIN S10 -----; E=2e-26 pir:E81234; 30S ribosomal protein S10 NMB0140 [imported] - Neisseria; E=4e-25 swissprot:P48851; RS10_NEIGO 30S RIBOSOMAL PROTEIN S10 -----; E=6e-25 COG: HI0776; COG0051 Ribosomal protein S10; E=2e-27 PFAM: PF00338; Ribosomal protein S10p/S20e; E=2.8e-41; 30S ribosomal protein S10 4192357 rpsJ 1796618 rpsJ Rhodopirellula baltica SH 1 30S ribosomal protein S10 NP_868050.1 4192031 D 243090 CDS NP_868051.1 32475057 1796224 4192499..4192651 1 NC_005027.1 hypothetical protein 4192651 1796224 RB7832 Rhodopirellula baltica SH 1 hypothetical protein NP_868051.1 4192499 D 243090 CDS NP_868052.1 32475058 1796223 4192692..4193378 1 NC_005027.1 PMID: 3892488 PMID: 365579 best DB hits: BLAST: swissprot:P52860; RL3_THETH 50S RIBOSOMAL PROTEIN L3 -----; E=1e-47 embl:CAB82070.1; (AL161803) 50S ribosomal protein L3; E=7e-45 swissprot:P73320; RL3_SYNY3 50S RIBOSOMAL PROTEIN L3 -----; E=3e-42 COG: Rv0701; COG0087 Ribosomal protein L3; E=4e-43 PFAM: PF00297; Ribosomal protein L3; E=2.7e-71; 50S ribosomal protein L3 4193378 rplC 1796223 rplC Rhodopirellula baltica SH 1 50S ribosomal protein L3 NP_868052.1 4192692 D 243090 CDS NP_868053.1 32475059 1795927 4193390..4194058 1 NC_005027.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 4194058 rplD 1795927 rplD Rhodopirellula baltica SH 1 50S ribosomal protein L4 NP_868053.1 4193390 D 243090 CDS NP_868054.1 32475060 1791061 4194060..4194383 1 NC_005027.1 PMID: 8790600 best DB hits: BLAST: swissprot:P55839; RL23_ACTAC 50S RIBOSOMAL PROTEIN L23 -----; E=1e-12 gb:AAK03497.1; (AE006177) RpL23 [Pasteurella multocida]; E=2e-12 pir:C83116; 50S ribosomal protein L23 PA4261 [imported] -; E=3e-12 COG: PA4261; COG0089 Ribosomal protein L23; E=3e-13 PFAM: PF00276; Ribosomal protein L23; E=6.9e-27; 50S ribosomal protein L23 4194383 rplW 1791061 rplW Rhodopirellula baltica SH 1 50S ribosomal protein L23 NP_868054.1 4194060 D 243090 CDS NP_868055.1 32475061 1790365 4194481..4195341 1 NC_005027.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 4195341 rplB 1790365 rplB Rhodopirellula baltica SH 1 50S ribosomal protein L2 NP_868055.1 4194481 D 243090 CDS NP_868056.1 32475062 1796411 4195376..4195645 1 NC_005027.1 PMID: 3892488 PMID: 348496 PMID: 10094780 best DB hits: BLAST: pir:B82059; ribosomal protein S19 VC2592 [imported] - Vibrio; E=2e-23 swissprot:P02375; RS19_ECOLI 30S RIBOSOMAL PROTEIN S19 -----; E=2e-23 swissprot:P44385; RS19_HAEIN 30S RIBOSOMAL PROTEIN S19 -----; E=5e-23 COG: VC2592; COG0185 Ribosomal protein S19; E=2e-24 PFAM: PF00203; Ribosomal protein S19; E=3.7e-42; ribosomal protein S19 4195645 rpsS 1796411 rpsS Rhodopirellula baltica SH 1 ribosomal protein S19 NP_868056.1 4195376 D 243090 CDS NP_868057.1 32475063 1796088 4195706..4196065 1 NC_005027.1 PMID: 3892488 PMID: 7007072 best DB hits: BLAST: pir:E81231; 50S ribosomal protein L22 NMB0147 [imported] - Neisseria; E=2e-17 swissprot:P02423; RL22_ECOLI 50S RIBOSOMAL PROTEIN L22 -----; E=9e-16 pir:A82059; ribosomal protein L22 VC2591 [imported] - Vibrio; E=3e-14 COG: NMB0147; COG0091 Ribosomal protein L22; E=2e-18 PFAM: PF00237; Ribosomal protein L22p/L17e; E=2.2e-31; 50S ribosomal protein L22 4196065 rplV 1796088 rplV Rhodopirellula baltica SH 1 50S ribosomal protein L22 NP_868057.1 4195706 D 243090 CDS NP_868058.1 32475064 1791085 4196161..4196871 1 NC_005027.1 PMID: 2222862 best DB hits: BLAST: swissprot:Q9Z9K8; RS3_BACHD 30S RIBOSOMAL PROTEIN S3 -----; E=4e-50 swissprot:O66437; RS3_AQUAE 30S RIBOSOMAL PROTEIN S3 -----; E=6e-50 pir:A81665; ribosomal protein S3 TC0809 [imported] - Chlamydia; E=1e-49 COG: BH0140; COG0092 Ribosomal protein S3; E=4e-51 PFAM: PF00417; Ribosomal protein S3, N-termin; E=1.2e-28 PF00013; KH domain; E=0.014 PF00189; Ribosomal protein S3, C-termin; E=4.1e-43; 30S ribosomal protein S3 4196871 rpsC 1791085 rpsC Rhodopirellula baltica SH 1 30S ribosomal protein S3 NP_868058.1 4196161 D 243090 CDS NP_868059.1 32475065 1795271 4196810..4197226 1 NC_005027.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 4197226 rplP 1795271 rplP Rhodopirellula baltica SH 1 50S ribosomal protein L16 NP_868059.1 4196810 D 243090 CDS NP_868060.1 32475066 1796457 4197405..4197623 1 NC_005027.1 PMID: 4018095 best DB hits: BLAST: embl:CAB82078.1; (AL161803) 50S ribosomal protein L29; E=3e-04 swissprot:O32989; RL29_MYCLE 50S RIBOSOMAL PROTEIN L29 -----; E=4e-04 swissprot:P95057; RL29_MYCTU 50S RIBOSOMAL PROTEIN L29 -----; E=0.002 COG: Rv0709; COG0255 Ribosomal protein L29; E=2e-04 PFAM: PF00831; Ribosomal L29 protein; E=2e-14; 50S ribosomal protein L29 4197623 rpmC 1796457 rpmC Rhodopirellula baltica SH 1 50S ribosomal protein L29 NP_868060.1 4197405 D 243090 CDS NP_868061.1 32475067 1790861 4197700..4198026 1 NC_005027.1 PMID: 344065 best DB hits: BLAST: swissprot:P02373; RS17_ECOLI 30S RIBOSOMAL PROTEIN S17 -----; E=1e-14 pir:E82058; ribosomal protein S17 VC2587 [imported] - Vibrio; E=2e-13 swissprot:P46175; RS17_BUCAK 30S RIBOSOMAL PROTEIN S17 -----; E=2e-13 COG: rpsQ; COG0186 Ribosomal protein S17; E=1e-15 PFAM: PF00366; Ribosomal protein S17; E=5.2e-27; 30S ribosomal protein S17 4198026 rpsQ 1790861 rpsQ Rhodopirellula baltica SH 1 30S ribosomal protein S17 NP_868061.1 4197700 D 243090 CDS NP_868062.1 32475068 1795442 4198081..4198449 1 NC_005027.1 PMID: 2508062 PMID: 4018095 PMID: 8805509 best DB hits: BLAST: swissprot:P95062; RL14_MYCTU 50S RIBOSOMAL PROTEIN L14 -----; E=5e-32 swissprot:O32993; RL14_MYCLE 50S RIBOSOMAL PROTEIN L14 -----; E=5e-32 swissprot:Q9Z9K4; RL14_BACHD 50S RIBOSOMAL PROTEIN L14 -----; E=2e-31 COG: Rv0714; COG0093 Ribosomal protein L14; E=2e-32 PFAM: PF00238; Ribosomal protein L14p/L23e; E=2.6e-73; 50S ribosomal protein L14 4198449 rplN 1795442 rplN Rhodopirellula baltica SH 1 50S ribosomal protein L14 NP_868062.1 4198081 D 243090 CDS NP_868063.1 32475069 1793822 4198529..4198876 1 NC_005027.1 PMID: 4018095 best DB hits: BLAST: swissprot:Q9Z9K3; RL24_BACHD 50S RIBOSOMAL PROTEIN L24 -----; E=5e-15 swissprot:P04455; RL24_BACST 50S RIBOSOMAL PROTEIN L24 -----; E=4e-14 swissprot:P12876; RL24_BACSU 50S RIBOSOMAL PROTEIN L24 (BL23) (12; E=9e-14 COG: BH0145; COG0198 Ribosomal protein L24; E=5e-16 PFAM: PF00467; KOW motif; E=4.2e-18; 50S ribosomal protein L24 4198876 rplX 1793822 rplX Rhodopirellula baltica SH 1 50S ribosomal protein L24 NP_868063.1 4198529 D 243090 CDS NP_868064.1 32475070 1797206 4198935..4199525 1 NC_005027.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 4199525 rplE 1797206 rplE Rhodopirellula baltica SH 1 50S ribosomal protein L5 NP_868064.1 4198935 D 243090 CDS NP_868065.1 32475071 1792611 4199624..4199809 1 NC_005027.1 best DB hits: BLAST: swissprot:Q9Z9K1; RS14_BACHD 30S RIBOSOMAL PROTEIN S14 -----; E=2e-09 swissprot:P24320; RS14_THETH 30S RIBOSOMAL PROTEIN S14 -----; E=8e-10 pir:S15440; ribosomal protein S14 - Thermus aquaticus (strain; E=9e-10 COG: CPn0937; COG0199 Ribosomal protein S14; E=2e-06 PFAM: PF00253; Ribosomal protein S14p/S29e; E=2.1e-27; 30 S ribosomal protein S14 4199809 rpsN 1792611 rpsN Rhodopirellula baltica SH 1 30 S ribosomal protein S14 NP_868065.1 4199624 D 243090 CDS NP_868066.1 32475072 1794278 4199839..4200240 1 NC_005027.1 PMID: 6806564 best DB hits: BLAST: swissprot:Q9Z9K0; RS8_BACHD 30S RIBOSOMAL PROTEIN S8 -----; E=2e-31 swissprot:P12879; RS8_BACSU 30S RIBOSOMAL PROTEIN S8 (BS8) -----; E=1e-30 pir:G69699; ribosomal protein S8 - Bacillus subtilis ----- ddbj:; E=4e-30 COG: BH0148; COG0096 Ribosomal protein S8; E=2e-32 PFAM: PF00410; Ribosomal protein S8; E=1.9e-63; 30S ribosomal protein S8 4200240 rpsH 1794278 rpsH Rhodopirellula baltica SH 1 30S ribosomal protein S8 NP_868066.1 4199839 D 243090 CDS NP_868067.1 32475073 1789933 4200306..4200851 1 NC_005027.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 4200851 rplF 1789933 rplF Rhodopirellula baltica SH 1 50S ribosomal protein L6 NP_868067.1 4200306 D 243090 CDS NP_868068.1 32475074 1791241 4200854..4201303 1 NC_005027.1 PMID: 3542562 best DB hits: BLAST: swissprot:Q9ZAE3; RL18_THEMA 50S RIBOSOMAL PROTEIN L18 -----; E=4e-21 embl:CAA79793.1; (Z21677) ribosomal protein L18 [Thermotoga; E=4e-20 swissprot:O24704; RL18_SYNP6 50S RIBOSOMAL PROTEIN L18 -----; E=1e-19 COG: TM1484; COG0256 Ribosomal protein L18; E=4e-22 PFAM: PF00861; Ribosomal L18p/L5e family; E=3.7e-41; 50S ribosomal protein L18 4201303 rplR 1791241 rplR Rhodopirellula baltica SH 1 50S ribosomal protein L18 NP_868068.1 4200854 D 243090 CDS NP_868069.1 32475075 1793350 4201351..4201884 1 NC_005027.1 PMID: 6806564 PMID: 6363400 best DB hits: BLAST: swissprot:P21467; RS5_BACSU 30S RIBOSOMAL PROTEIN S5 (BS5) -----; E=1e-31 swissprot:Q9Z9J7; RS5_BACHD 30S RIBOSOMAL PROTEIN S5 -----; E=1e-31 pir:A81233; 30s ribosomal protein S5 NMB0159 [imported] - Neisseria; E=3e-31 COG: BS_rpsE; COG0098 Ribosomal protein S5; E=9e-33 PFAM: PF00333; Ribosomal protein S5; E=1.7e-62; 30S ribosomal protein S5 4201884 rpsE 1793350 rpsE Rhodopirellula baltica SH 1 30S ribosomal protein S5 NP_868069.1 4201351 D 243090 CDS NP_868070.1 32475076 1794317 4202048..4202542 1 NC_005027.1 PMID: 4018095 best DB hits: BLAST: swissprot:O67561; RL15_AQUAE 50S RIBOSOMAL PROTEIN L15 -----; E=3e-27 swissprot:Q9X1J0; RL15_THEMA 50S RIBOSOMAL PROTEIN L15 -----; E=1e-25 swissprot:O83237; RL15_TREPA 50S RIBOSOMAL PROTEIN L15 -----; E=1e-23 COG: aq_1642; COG0200 Ribosomal protein L15; E=3e-28 PFAM: PF01305; Ribosomal protein L15 amino te; E=5.2e-35 PF00256; Ribosomal protein L15; E=1.8e-19; 50S ribosomal protein L15 4202542 rplO 1794317 rplO Rhodopirellula baltica SH 1 50S ribosomal protein L15 NP_868070.1 4202048 D 243090 CDS NP_868071.1 32475077 1793997 4202820..4204214 1 NC_005027.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 4204214 secY 1793997 secY Rhodopirellula baltica SH 1 preprotein translocase subunit SecY NP_868071.1 4202820 D 243090 CDS NP_868072.1 32475078 1796540 4204183..4204806 1 NC_005027.1 PMID: 9300823 PMID: 1554691 PMID: 9715904 best DB hits: BLAST: swissprot:O24706; KAD_SYNP6 ADENYLATE KINASE (ATP-AMP; E=3e-26 swissprot:P43414; KAD_STRCO ADENYLATE KINASE (ATP-AMP; E=3e-26 swissprot:P27142; KAD_BACST ADENYLATE KINASE (ATP-AMP; E=8e-26 COG: Rv0733; COG0563 Adenylate kinase and related kinases; E=3e-26 PFAM: PF02223; Thymidylate kinase; E=0.27 PF01202; Shikimate kinase; E=0.041 PF01712; Deoxynucleoside kinase; E=0.27; adenylate kinase 4204806 adk 1796540 adk Rhodopirellula baltica SH 1 adenylate kinase NP_868072.1 4204183 D 243090 CDS NP_868073.1 32475079 1796269 complement(4204869..4205570) 1 NC_005027.1 PMID: 97061201 best DB hits: BLAST: pir:S75290; hypothetical protein sll1289 - Synechocystis sp. (strain; E=3e-20 pir:G70687; hypothetical protein Rv1732c - Mycobacterium; E=1e-17 gb:AAF87891.1; AC015447_1 (AC015447) Hypothetical protein; E=1e-15 COG: sll1289; COG0526 Thiol-disulfide isomerase and thioredoxins; E=3e-21; hypothetical protein 4205570 1796269 RB7868 Rhodopirellula baltica SH 1 hypothetical protein NP_868073.1 4204869 R 243090 CDS NP_868074.1 32475080 1790322 complement(4205582..4206676) 1 NC_005027.1 PMID: 8098033 best DB hits: BLAST: pir:D81057; GDSL lipase NMB1674 [imported] -; E=4e-13 gb:AAG54851.1; AE005230_11 (AE005230) acyl-CoA thioesterase I; E=9e-11 swissprot:P29679; TESA_ECOLI ACYL-COA THIOESTERASE I PRECURSOR; E=2e-10 COG: NMB1674; COG2755 Lysophospholipase L1 and related esterases; E=3e-14 PFAM: PF00657; Lipase/Acylhydrolase with GDSL-li; E=0.59; GDSL lipase 4206676 1790322 RB7869 Rhodopirellula baltica SH 1 GDSL lipase NP_868074.1 4205582 R 243090 CDS NP_868075.1 32475081 1790373 4206608..4208176 1 NC_005027.1 PMID: 12004073; signal peptide 4208176 1790373 RB7871 Rhodopirellula baltica SH 1 signal peptide NP_868075.1 4206608 D 243090 CDS NP_868076.1 32475082 1796341 4208176..4209654 1 NC_005027.1 PMID: 7910580 PMID: 1572648 best DB hits: BLAST: gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=4e-58 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=4e-58 pdb:1E2S; P Chain P, Crystal Structure Of An Arylsulfatase A; E=4e-57 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=5e-25 PFAM: PF00884; Sulfatase; E=3.3e-84; arylsulfatase 4209654 arsA 1796341 arsA Rhodopirellula baltica SH 1 arylsulfatase NP_868076.1 4208176 D 243090 CDS NP_868077.1 32475083 1792161 4209807..4211261 1 NC_005027.1 PMID: 20164110 best DB hits: BLAST: gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=2e-35 ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=6e-35 gb:AAF30402.1; AF109924_1 (AF109924) sulfatase 1 precursor [Helix; E=2e-30 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=2e-26 PA0924; COG3083 Predicted hydrolase of alkaline phosphatase; E=0.002 PFAM: PF00884; Sulfatase; E=3.3e-51; N-acetylgalactosamine-6-sulfatase 4211261 GALNS 1792161 GALNS Rhodopirellula baltica SH 1 N-acetylgalactosamine-6-sulfatase NP_868077.1 4209807 D 243090 CDS NP_868078.1 32475084 1796506 complement(4211388..4211615) 1 NC_005027.1 hypothetical protein 4211615 1796506 RB7881 Rhodopirellula baltica SH 1 hypothetical protein NP_868078.1 4211388 R 243090 CDS NP_868079.1 32475085 1791498 4211572..4213689 1 NC_005027.1 PMID: 8760914 best DB hits: BLAST: pir:C81860; DNA mismatch repair protein NMA1655 [imported] -; E=8e-97 pir:B81084; mismatch repair protein MutL NMB1442 [imported] -; E=6e-95 ddbj:BAB06087.1; (AP001515) DNA mismatch repair protein [Bacillus; E=1e-85 COG: NMB1442; COG0323 DNA mismatch repair enzyme (predicted ATPase); E=6e-96 PFAM: PF02518; Histidine kinase-, DNA gyrase; E=0.00053 PF01119; DNA mismatch repair protein; E=8.5e-57; DNA mismatch repair protein 4213689 mutL 1791498 mutL Rhodopirellula baltica SH 1 DNA mismatch repair protein NP_868079.1 4211572 D 243090 CDS NP_868080.1 32475086 1796393 4213686..4214741 1 NC_005027.1 PMID: 2670894 best DB hits: BLAST: pir:H70373; pyridoxal phosphate biosynthetic protein PdxA - Aquifex; E=3e-45 pir:S77070; pyridoxal phosphate biosynthetic protein pdxA -; E=1e-44 pir:A83572; pyridoxal phosphate biosynthetic protein PdxA PA0593; E=2e-43 COG: aq_852; COG1995 Pyridoxin biosynthesis protein of unknown function; E=3e-46; pyridoxal phosphate biosynthetic protein PdxA 4214741 pdxA 1796393 pdxA Rhodopirellula baltica SH 1 pyridoxal phosphate biosynthetic protein PdxA NP_868080.1 4213686 D 243090 CDS NP_868081.1 32475087 1796529 4214726..4216519 1 NC_005027.1 hypothetical protein 4216519 1796529 RB7886 Rhodopirellula baltica SH 1 hypothetical protein NP_868081.1 4214726 D 243090 CDS NP_868082.1 32475088 1794559 4217484..4218680 1 NC_005027.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 4218680 tufA 1794559 tufA Rhodopirellula baltica SH 1 elongation factor Tu NP_868082.1 4217484 D 243090 CDS NP_868083.1 32475089 1791409 4218945..4219403 1 NC_005027.1 best DB hits: PFAM: PF00584; SecE/Sec61-gamma subunits of protein; E=2.2e-07; SecE protein 4219403 secE 1791409 secE Rhodopirellula baltica SH 1 SecE protein NP_868083.1 4218945 D 243090 CDS NP_868084.1 32475090 1796168 4219400..4220077 1 NC_005027.1 PMID: 2137819 PMID: 1532577 PMID: 7505669 PMID: 8422985 best DB hits: BLAST: gb:AAK03828.1; (AE006211) NusG [Pasteurella multocida]; E=3e-27 pir:A82338; transcription antitermination protein NusG VC0323; E=6e-26 gb:AAF33495.1; (AF170176) 99% identity over 181 amino acids with; E=8e-25 COG: VC0323; COG0250 Transcription antiterminator; E=6e-27 PFAM: PF02357; Transcription termination facto; E=2.9e-10 PF00467; KOW motif; E=0.37; transcription antiterminator NusG 4220077 nusG 1796168 nusG Rhodopirellula baltica SH 1 transcription antiterminator NusG NP_868084.1 4219400 D 243090 CDS NP_868085.1 32475091 1792618 4220226..4220651 1 NC_005027.1 PMID: 8181706 PMID: 7715599 PMID: 9731302 best DB hits: BLAST: ddbj:BAB03838.1; (AP001507) 50S ribosomal protein L11 [Bacillus; E=5e-37 swissprot:P36254; RL11_STACA 50S RIBOSOMAL PROTEIN L11 -----; E=1e-36 swissprot:O06443; RL11_STAAU 50S RIBOSOMAL PROTEIN L11 -----; E=1e-36 COG: BH0119; COG0080 Ribosomal protein L11; E=5e-38 PFAM: PF00298; Ribosomal protein L11; E=1.4e-62; 50S ribosomal protein L11 4220651 rplK 1792618 rplK Rhodopirellula baltica SH 1 50S ribosomal protein L11 NP_868085.1 4220226 D 243090 CDS NP_868086.1 32475092 1795135 complement(4220692..4221276) 1 NC_005027.1 PMID: 97426617 PMID: 9278503 best DB hits: BLAST: swissprot:P39903; YEAA_ECOLI HYPOTHETICAL 15.5 KDA PROTEIN IN; E=5e-32 gb:AAG51964.1; AC024260_2 (AC024260) transcriptional regulator,; E=3e-31 ddbj:BAA15575.1; (D90821) F44E2.6 protein [Escherichia coli]; E=4e-30 COG: yeaA; COG0229 Conserved domain frequently associated with peptide; E=5e-33 HI1455_2; COG0229 Conserved domain frequently associated with; E=3e-29 BS_yppQ; COG0229 Conserved domain frequently associated with peptide; E=2e-28 PFAM: PF01641; Domain of unknown function DUF25; E=4.7e-66; peptide methionine sulfoxide reductase 4221276 msrB 1795135 msrB Rhodopirellula baltica SH 1 peptide methionine sulfoxide reductase NP_868086.1 4220692 R 243090 CDS NP_868087.1 32475093 1791567 complement(4221293..4221613) 1 NC_005027.1 hypothetical protein 4221613 1791567 RB7901 Rhodopirellula baltica SH 1 hypothetical protein NP_868087.1 4221293 R 243090 CDS NP_868088.1 32475094 1795577 4221555..4221755 1 NC_005027.1 hypothetical protein 4221755 1795577 RB7902 Rhodopirellula baltica SH 1 hypothetical protein NP_868088.1 4221555 D 243090 CDS NP_868089.1 32475095 1794514 4221689..4222915 1 NC_005027.1 PMID: 97221617 best DB hits: BLAST: gb:AAK03847.1; (AE006213) unknown [Pasteurella multocida]; E=2e-43 pir:E70943; probable ABC-type sugar transport protein -; E=1e-42 embl:CAB77334.1; (AL160331) ABC transporter ATP-binding protein; E=1e-42 COG: Rv2038c; COG1130 ABC-type sugar/spermidine/putrescine transport; E=9e-44 PA0280; COG1118 ABC-type sulfate/molybdate transport systems, ATPase; E=5e-41 BH1140; COG1130 ABC-type sugar/spermidine/putrescine transport; E=5e-41 PFAM: PF00071; Ras family; E=0.056 PF00005; ABC transporter; E=8.4e-47; ABC transporter 4222915 1794514 RB7903 Rhodopirellula baltica SH 1 ABC transporter NP_868089.1 4221689 D 243090 CDS NP_868090.1 32475096 1794448 4222930..4223628 1 NC_005027.1 best DB hits: BLAST: pir:B82738; conserved hypothetical protein XF0979 [imported] -; E=2e-14 pir:G81234; conserved hypothetical protein NMB0122 [imported] -; E=3e-14 pir:A82360; conserved hypothetical protein VC0146 [imported] -; E=9e-14 COG: XF0979; COG0742 N6-adenine-specific methylase; E=2e-15 PAB1237; COG1092 Predicted SAM-dependent methyltransferases; E=7e-04 RP545; COG0742 N6-adenine-specific methylase; E=0.006; hypothetical protein 4223628 1794448 RB7906 Rhodopirellula baltica SH 1 hypothetical protein NP_868090.1 4222930 D 243090 CDS NP_868091.1 32475097 1792242 complement(4223603..4224445) 1 NC_005027.1 PMID: 8445654 best DB hits: BLAST: pir:C75472; probable lipase - Deinococcus radiodurans (strain R1); E=2e-17 pir:E70914; probable lipO protein - Mycobacterium tuberculosis; E=3e-07 pir:H70731; probable esterase - Mycobacterium tuberculosis (strain; E=4e-07 COG: DR0821_2; COG0657 Acetyl esterase; E=2e-17 DR0415; COG2272 Carboxylesterase type B; E=0.002 VCA0490; COG0657 Acetyl esterase; E=0.005 PFAM: PF00326; Prolyl oligopeptidase; E=0.00023 PF00135; Carboxylesterase; E=2.4e-05; lipase 4224445 1792242 RB7907 Rhodopirellula baltica SH 1 lipase NP_868091.1 4223603 R 243090 CDS NP_868092.1 32475098 1790909 complement(4224502..4225494) 1 NC_005027.1 signal peptide 4225494 1790909 RB7909 Rhodopirellula baltica SH 1 signal peptide NP_868092.1 4224502 R 243090 CDS NP_868093.1 32475099 1796324 complement(4225623..4226849) 1 NC_005027.1 best DB hits: BLAST: pir:T35287; probable secreted proteinase - Streptomyces coelicolor; E=3e-10 gb:AAK02818.1; (AE006110) HtrA [Pasteurella multocida]; E=2e-08 pir:S47170; hypothetical protein 34K - Mycobacterium; E=3e-08 COG: VNG0226G; COG0265 Trypsin-like serine proteases, typically; E=9e-09 htrA; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=2e-08 aq_1450; COG0265 Trypsin-like serine proteases, typically; E=5e-08 PFAM: PF00089; Trypsin; E=0.038; secreted proteinase 4226849 1796324 RB7911 Rhodopirellula baltica SH 1 secreted proteinase NP_868093.1 4225623 R 243090 CDS NP_868094.1 32475100 1791426 complement(4226932..4227861) 1 NC_005027.1 best DB hits: PFAM: PF02236; Viral DNA-binding protein; E=0.73; signal peptide 4227861 1791426 RB7912 Rhodopirellula baltica SH 1 signal peptide NP_868094.1 4226932 R 243090 CDS NP_868095.1 32475101 1797198 complement(4227877..4228476) 1 NC_005027.1 signal peptide 4228476 1797198 RB7914 Rhodopirellula baltica SH 1 signal peptide NP_868095.1 4227877 R 243090 CDS NP_868096.1 32475102 1796272 complement(4227877..4228083) 1 NC_005027.1 hypothetical protein 4228083 1796272 RB7913 Rhodopirellula baltica SH 1 hypothetical protein NP_868096.1 4227877 R 243090 CDS NP_868097.1 32475103 1794718 4228108..4228539 1 NC_005027.1 signal peptide 4228539 1794718 RB7915 Rhodopirellula baltica SH 1 signal peptide NP_868097.1 4228108 D 243090 CDS NP_868098.1 32475104 1792606 4228608..4229396 1 NC_005027.1 hypothetical protein 4229396 1792606 RB7916 Rhodopirellula baltica SH 1 hypothetical protein NP_868098.1 4228608 D 243090 CDS NP_868099.1 32475105 1792200 complement(4229437..4231818) 1 NC_005027.1 PMID: 7883195 best DB hits: BLAST: gb:AAD03499.2; (AF035395) serinethreonine protein kinase PpkA; E=6e-16 pir:D83637; serinethreonine protein kinase PpkA PA0074 [imported] -; E=1e-15 pir:T36502; serinethreonine protein kinase - Streptomyces; E=2e-11 COG: PA0074; COG0515 Serine/threonine protein kinases; E=1e-16 PFAM: PF00069; Protein kinase domain; E=1e-08; serine/threonine protein kinase PpkA 4231818 ppkA 1792200 ppkA Rhodopirellula baltica SH 1 serine/threonine protein kinase PpkA NP_868099.1 4229437 R 243090 CDS NP_868100.1 32475106 1791332 4231813..4232499 1 NC_005027.1 PMID: 20372644 best DB hits: BLAST: ddbj:BAB08177.1; (AB039273) ECF sigma factor AdsA [Streptomyces; E=2e-05 pir:T36271; probable RNA polymerase sigma factor - Streptomyces; E=2e-04 embl:CAB55345.1; (AJ010584) ECF sigma factor [Streptomyces; E=2e-04 COG: Rv3414c; COG1595 DNA-directed RNA polymerase specialized sigma; E=3e-05 TM0902; COG1191 DNA-directed RNA polymerase specialized sigma; E=3e-04 BS_sigH; COG1595 DNA-directed RNA polymerase specialized sigma; E=0.008 PFAM: PF00140; Sigma-70 factor; E=3.2e-05; ECF sigma factor AdsA 4232499 sig 1791332 sig Rhodopirellula baltica SH 1 ECF sigma factor AdsA NP_868100.1 4231813 D 243090 CDS NP_868101.1 32475107 1790594 4232595..4233323 1 NC_005027.1 best DB hits: PFAM: PF00009; Elongation factor Tu family; E=0.29; hypothetical protein 4233323 1790594 RB7926 Rhodopirellula baltica SH 1 hypothetical protein NP_868101.1 4232595 D 243090 CDS NP_868102.1 32475108 1795874 4233448..4236582 1 NC_005027.1 PMID: 99426839 best DB hits: BLAST: embl:CAA10713.1; (AJ132604) hypothetical protein [Lactococcus; E=1e-38 gb:AAK05985.1; AE006418_5 (AE006418) serinethreonine protein; E=8e-38 gb:AAD42851.1; AF159689_3 (AF159689) serinethreonine kinase PKN3; E=2e-37 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=3e-38 PFAM: PF01610; Transposase; E=0.64 PF00069; Protein kinase domain; E=7.4e-61; serine/threonine protein kinase 4236582 pknB 1795874 pknB Rhodopirellula baltica SH 1 serine/threonine protein kinase NP_868102.1 4233448 D 243090 CDS NP_868103.1 32475109 1792599 4236583..4236810 1 NC_005027.1 hypothetical protein 4236810 1792599 RB7929 Rhodopirellula baltica SH 1 hypothetical protein NP_868103.1 4236583 D 243090 CDS NP_868104.1 32475110 1793576 4236807..4237280 1 NC_005027.1 hypothetical protein 4237280 1793576 RB7931 Rhodopirellula baltica SH 1 hypothetical protein NP_868104.1 4236807 D 243090 CDS NP_868105.1 32475111 1791026 complement(4237340..4237720) 1 NC_005027.1 signal peptide 4237720 1791026 RB7935 Rhodopirellula baltica SH 1 signal peptide NP_868105.1 4237340 R 243090 CDS NP_868106.1 32475112 1790890 complement(4237684..4237809) 1 NC_005027.1 hypothetical protein 4237809 1790890 RB7937 Rhodopirellula baltica SH 1 hypothetical protein NP_868106.1 4237684 R 243090 CDS NP_868107.1 32475113 1796694 complement(4237919..4238386) 1 NC_005027.1 hypothetical protein 4238386 1796694 RB7938 Rhodopirellula baltica SH 1 hypothetical protein NP_868107.1 4237919 R 243090 CDS NP_868108.1 32475114 1795798 4238296..4238613 1 NC_005027.1 hypothetical protein 4238613 1795798 RB7939 Rhodopirellula baltica SH 1 hypothetical protein NP_868108.1 4238296 D 243090 CDS NP_868109.1 32475115 1792875 complement(4238703..4240943) 1 NC_005027.1 PMID: 1537804 best DB hits: BLAST: swissprot:P27236; DCP_SALTY PEPTIDYL-DIPEPTIDASE DCP (DIPEPTIDYL; E=1e-109 pir:E82620; peptidyl-dipeptidase XF1944 [imported] - Xylella; E=1e-107 gb:AAG56224.1; AE005351_3 (AE005351) dipeptidyl carboxypeptidase; E=1e-106 COG: XF1944; COG0339 Zn-dependent oligopeptidases; E=1e-108 PFAM: PF01432; Peptidase M3; E=1.9e-122; peptidyl-dipeptidase DCP 4240943 dcp 1792875 dcp Rhodopirellula baltica SH 1 peptidyl-dipeptidase DCP NP_868109.1 4238703 R 243090 CDS NP_868110.1 32475116 1791533 complement(4240892..4242835) 1 NC_005027.1 in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from EScherichia coli involved in cysteine biosynthesis; bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase 4242835 cysN 1791533 cysN Rhodopirellula baltica SH 1 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase NP_868110.1 4240892 R 243090 CDS NP_868111.1 32475117 1792402 complement(4242979..4243890) 1 NC_005027.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 4243890 cysD 1792402 cysD Rhodopirellula baltica SH 1 sulfate adenylyltransferase subunit 2 NP_868111.1 4242979 R 243090 CDS NP_868112.1 32475118 1792870 complement(4243996..4244691) 1 NC_005027.1 PMID: 98295987 PMID: 9634230 best DB hits: BLAST: swissprot:O53597; GIDB_MYCTU GLUCOSE INHIBITED DIVISION PROTEIN B; E=2e-15 swissprot:Q50203; GIDB_MYCLE GLUCOSE INHIBITED DIVISION PROTEIN B; E=9e-15 pir:C82950; glucose inhibited division protein B PA5564 [imported] -; E=1e-14 COG: Rv3919c; COG0357 Predicted S-adenosylmethionine-dependent; E=2e-16 PFAM: PF02527; Glucose inhibited division protein; E=1.5e-26; glucose inhibited division protein B (GidB) 4244691 gidB 1792870 gidB Rhodopirellula baltica SH 1 glucose inhibited division protein B (GidB) NP_868112.1 4243996 R 243090 CDS NP_868113.1 32475119 1794359 complement(4244889..4246172) 1 NC_005027.1 PMID: 9083067 PMID: 97238870 best DB hits: BLAST: gb:AAF26789.1; AC016829_13 (AC016829) O-linked GlcNAc; E=2e-09 gb:AAA62535.1; (U21320) contains TPR domain-like repeats; E=2e-08 gb:AAB63465.1; (U77412) O-linked GlcNAc transferase; E=2e-08 COG: sll0886; COG0457 TPR-repeat-containing proteins; E=2e-07 PFAM: PF00515; TPR Domain; E=0.025; O-linked GlcNAc transferase 4246172 1794359 RB7947 Rhodopirellula baltica SH 1 O-linked GlcNAc transferase NP_868113.1 4244889 R 243090 CDS NP_868114.1 32475120 1795134 4246162..4246314 1 NC_005027.1 best DB hits: PFAM: PF02522; Aminoglycoside 3-N-acetyltrans; E=0.66; hypothetical protein 4246314 1795134 RB7950 Rhodopirellula baltica SH 1 hypothetical protein NP_868114.1 4246162 D 243090 CDS NP_868115.1 32475121 1796241 4246311..4246565 1 NC_005027.1 hypothetical protein 4246565 1796241 RB7951 Rhodopirellula baltica SH 1 hypothetical protein NP_868115.1 4246311 D 243090 CDS NP_868116.1 32475122 1795528 complement(4246743..4247114) 1 NC_005027.1 hypothetical protein 4247114 1795528 RB7955 Rhodopirellula baltica SH 1 hypothetical protein NP_868116.1 4246743 R 243090 CDS NP_868117.1 32475123 1796543 complement(4247111..4249921) 1 NC_005027.1 PMID: 8921893 best DB hits: BLAST: swissprot:Q9X909; TOP1_STRCO DNA TOPOISOMERASE I (OMEGA-PROTEIN); E=0.0 pir:G75403; DNA topoisomerase I - Deinococcus radiodurans (strain; E=0.0 swissprot:Q59567; TOP1_MYCTU DNA TOPOISOMERASE I (OMEGA-PROTEIN); E=0.0 COG: DR1374_1; COG0550 Topoisomerase IA; E=1e-170 PFAM: PF01751; Toprim domain; E=3.1e-39 PF01131; DNA topoisomerase; E=4e-164; DNA topoisomerase I 4249921 topA 1796543 topA Rhodopirellula baltica SH 1 DNA topoisomerase I NP_868117.1 4247111 R 243090 CDS NP_868118.1 32475124 1795769 complement(4249943..4256578) 1 NC_005027.1 PMID: 8675016 best DB hits: BLAST: swissprot:P94972; UVRA_MYCTU EXCINUCLEASE ABC SUBUNIT A -----; E=0.0 swissprot:Q56242; UVRA_THETH EXCINUCLEASE ABC SUBUNIT A -----; E=0.0 swissprot:Q9Z507; UVRA_STRCO EXCINUCLEASE ABC SUBUNIT A -----; E=0.0 COG: Rv1638; COG0178 Excinuclease ATPase subunit; E=0.0 PFAM: PF00005; ABC transporter; E=0.033 PF01583; Adenylylsulfate kinase; E=0.026 PF00005; ABC transporter; E=5e-12; exinuclease ABC subunit A 4256578 uvrA 1795769 uvrA Rhodopirellula baltica SH 1 exinuclease ABC subunit A NP_868118.1 4249943 R 243090 CDS NP_868119.1 32475125 1794846 complement(4256632..4257723) 1 NC_005027.1 PMID: 7819288 PMID: 9671698 best DB hits: BLAST: ddbj:BAB03821.1; (AP001507) creatine kinase [Bacillus halodurans]; E=1e-66 swissprot:P37570; YACI_BACSU HYPOTHETICAL 41.1 KD PROTEIN IN; E=2e-65 gb:AAC44445.1; (U40604) ORF3; 39 kDa protein [Listeria; E=8e-56 PFAM: PF00217; ATP:guanido phosphotransferase; E=0.0053; ATP:guanido phosphotransferase 4257723 yacI 1794846 yacI Rhodopirellula baltica SH 1 ATP:guanido phosphotransferase NP_868119.1 4256632 R 243090 CDS NP_868120.1 32475126 1791849 complement(4257720..4258241) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAA90847.1; (AB031211) YacH [Bacillus halodurans] -----; E=2e-08 swissprot:P37569; YACH_BACSU HYPOTHETICAL 21.0 KD PROTEIN IN; E=5e-08 gb:AAC44444.1; (U40604) ORF2; 19 kDa protein [Listeria; E=2e-05 PFAM: PF02151; UvrB/uvrC motif; E=4.7e-08; hypothetical protein 4258241 yacH 1791849 yacH Rhodopirellula baltica SH 1 hypothetical protein NP_868120.1 4257720 R 243090 CDS NP_868121.1 32475127 1794141 4258303..4258464 1 NC_005027.1 hypothetical protein 4258464 1794141 RB7965 Rhodopirellula baltica SH 1 hypothetical protein NP_868121.1 4258303 D 243090 CDS NP_868122.1 32475128 1791269 4258474..4260117 1 NC_005027.1 PMID: 2732211 best DB hits: BLAST: swissprot:P14953; TRPE_CLOTM ANTHRANILATE SYNTHASE COMPONENT I; E=1e-112 swissprot:P21689; TRPE_PSESS ANTHRANILATE SYNTHASE COMPONENT I; E=1e-104 pir:A39128; anthranilate synthase (EC 4.1.3.27) component I; E=1e-104 COG: PA0609; COG0147 Anthranilate/para-aminobenzoate synthases component; E=1e-103 VNG0384G; COG0147 Anthranilate/para-aminobenzoate synthases; E=2e-66 VC1174; COG0147 Anthranilate/para-aminobenzoate synthases component; E=1e-64 PFAM: PF00425; chorismate binding enzyme; E=2e-166; anthranilate synthase component I 4260117 trpE 1791269 trpE Rhodopirellula baltica SH 1 anthranilate synthase component I NP_868122.1 4258474 D 243090 CDS NP_868123.1 32475129 1797199 4260248..4260739 1 NC_005027.1 best DB hits: BLAST: pir:F64973; hypothetical protein b2071 - Escherichia coli (strain; E=1e-08 pir:D81118; conserved hypothetical protein ankyrin-related protein; E=8e-08 pir:C81903; hypothetical protein NMA1343 [imported] - Neisseria; E=1e-04; hypothetical protein 4260739 1797199 RB7970 Rhodopirellula baltica SH 1 hypothetical protein NP_868123.1 4260248 D 243090 CDS NP_868124.1 32475130 1797209 complement(4261285..4265451) 1 NC_005027.1 PMID: 97428333 PMID: 2986626 PMID: 9281430 PMID: 11152119 best DB hits: BLAST: pir:A83363; probable cytochrome c precursor PA2266 [imported] -; E=5e-09 pir:E83075; probable cytochrome c PA4571 [imported] - Pseudomonas; E=7e-07 pir:CCTW5T; cytochrome c552 [validated] - Thermus aquaticus; E=9e-07 COG: PA2266; COG2010 Cytochrome c, mono- and diheme variants; E=5e-10 PFAM: PF00034; Cytochrome c; E=0.042; cytochrome c precursor 4265451 cycA 1797209 cycA Rhodopirellula baltica SH 1 cytochrome c precursor NP_868124.1 4261285 R 243090 CDS NP_868125.1 32475131 1790680 4265473..4265817 1 NC_005027.1 hypothetical protein 4265817 1790680 RB7978 Rhodopirellula baltica SH 1 hypothetical protein NP_868125.1 4265473 D 243090 CDS NP_868126.1 32475132 1791224 4265869..4266462 1 NC_005027.1 hypothetical protein 4266462 1791224 RB7980 Rhodopirellula baltica SH 1 hypothetical protein NP_868126.1 4265869 D 243090 CDS NP_868127.1 32475133 1797184 complement(4266520..4267023) 1 NC_005027.1 hypothetical protein 4267023 1797184 RB7983 Rhodopirellula baltica SH 1 hypothetical protein NP_868127.1 4266520 R 243090 CDS NP_868128.1 32475134 1789915 4267183..4267290 1 NC_005027.1 hypothetical protein 4267290 1789915 RB7984 Rhodopirellula baltica SH 1 hypothetical protein NP_868128.1 4267183 D 243090 CDS NP_868129.1 32475135 1795703 4267280..4268695 1 NC_005027.1 PMID: 1391778 best DB hits: BLAST: swissprot:P30364; ASPG_LUPAN L-ASPARAGINASE (L-ASPARAGINE; E=3e-62 swissprot:Q9ZSD6; ASPG_LUPLU L-ASPARAGINASE (L-ASPARAGINE; E=3e-62 swissprot:P50288; ASPG_LUPAL L-ASPARAGINASE (L-ASPARAGINE; E=5e-62 COG: ybiK; COG1446 Asparaginase; E=2e-56 PFAM: PF02530; Porin subfamily; E=0.047 PF01112; Asparaginase; E=1.9e-57; L-asparaginase 4268695 ansA 1795703 ansA Rhodopirellula baltica SH 1 L-asparaginase NP_868129.1 4267280 D 243090 CDS NP_868130.1 32475136 1795175 4268647..4269756 1 NC_005027.1 hypothetical protein 4269756 1795175 RB7987 Rhodopirellula baltica SH 1 hypothetical protein NP_868130.1 4268647 D 243090 CDS NP_868131.1 32475137 1796714 4269708..4271909 1 NC_005027.1 hypothetical protein 4271909 1796714 RB7989 Rhodopirellula baltica SH 1 hypothetical protein NP_868131.1 4269708 D 243090 CDS NP_868132.1 32475138 1796421 4271954..4273435 1 NC_005027.1 PMID: 11743194; signal peptide 4273435 1796421 RB7991 Rhodopirellula baltica SH 1 signal peptide NP_868132.1 4271954 D 243090 CDS NP_868133.1 32475139 1789941 complement(4273470..4275440) 1 NC_005027.1 PMID: 20164110 PMID: 7910580 PMID: 1572648 best DB hits: BLAST: pir:E64903; arylsulfatase homolog b1498 - Escherichia coli -----; E=2e-39 swissprot:P77318; YDEN_ECOLI SULFATASE YDEN PRECURSOR; E=2e-39 gb:AAG56270.1; AE005355_4 (AE005355) sulfatase; E=2e-39 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=2e-40 PFAM: PF00884; Sulfatase; E=1.1e-59; arylsulfatase 4275440 arsA 1789941 arsA Rhodopirellula baltica SH 1 arylsulfatase NP_868133.1 4273470 R 243090 CDS NP_868134.1 32475140 1793123 4275399..4276436 1 NC_005027.1 hypothetical protein 4276436 1793123 RB7998 Rhodopirellula baltica SH 1 hypothetical protein NP_868134.1 4275399 D 243090 CDS NP_868135.1 32475141 1791069 4276441..4277514 1 NC_005027.1 best DB hits: PFAM: PF00573; Ribosomal protein L4/L1 family; E=0.0042; hypothetical protein 4277514 1791069 RB7999 Rhodopirellula baltica SH 1 hypothetical protein NP_868135.1 4276441 D 243090 CDS NP_868136.1 32475142 1791465 complement(4276849..4277541) 1 NC_005027.1 signal peptide 4277541 1791465 RB8001 Rhodopirellula baltica SH 1 signal peptide NP_868136.1 4276849 R 243090 CDS NP_868137.1 32475143 1791361 4277579..4279036 1 NC_005027.1 PMID: 8020961 PMID: 1755850 PMID: 8001980 PMID: 1522213 best DB hits: BLAST: gb:AAF49287.1; (AE003522) CG7402 gene product [Drosophila; E=2e-38 gb:AAF49302.1; (AE003522) CG5584 gene product [Drosophila; E=2e-37 ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=2e-35 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=2e-31 PFAM: PF00884; Sulfatase; E=2.4e-44; N-acetylgalactosamine 6-sulfate sulfatase (GALNS) 4279036 GALNS 1791361 GALNS Rhodopirellula baltica SH 1 N-acetylgalactosamine 6-sulfate sulfatase (GALNS) NP_868137.1 4277579 D 243090 CDS NP_868138.1 32475144 1795165 4279356..4280558 1 NC_005027.1 PMID: hofG PMID: hopG best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; general secretion pathway protein G 4280558 1795165 RB8008 Rhodopirellula baltica SH 1 general secretion pathway protein G NP_868138.1 4279356 D 243090 CDS NP_868139.1 32475145 1797210 4280574..4280861 1 NC_005027.1 signal peptide 4280861 1797210 RB8010 Rhodopirellula baltica SH 1 signal peptide NP_868139.1 4280574 D 243090 CDS NP_868140.1 32475146 1791882 complement(4281114..4282298) 1 NC_005027.1 hypothetical protein 4282298 1791882 RB8011 Rhodopirellula baltica SH 1 hypothetical protein NP_868140.1 4281114 R 243090 CDS NP_868141.1 32475147 1796125 complement(4282280..4282669) 1 NC_005027.1 hypothetical protein 4282669 1796125 RB8012 Rhodopirellula baltica SH 1 hypothetical protein NP_868141.1 4282280 R 243090 CDS NP_868142.1 32475148 1795249 complement(4282620..4282802) 1 NC_005027.1 hypothetical protein 4282802 1795249 RB8014 Rhodopirellula baltica SH 1 hypothetical protein NP_868142.1 4282620 R 243090 CDS NP_868143.1 32475149 1797205 4282805..4284103 1 NC_005027.1 PMID: 11294880 best DB hits: BLAST: gb:AAG12988.1; AF169257_1 (AF169257) sodiumcalcium exchanger; E=4e-08 ref:XP_009649.1; sodium calcium exchanger [Homo sapiens]; E=4e-08 gb:AAG60049.1; AF314821_1 (AF314821) K+-dependent NaCa exchanger; E=4e-08 COG: MTH1155; COG0530 Ca2+/Na+ antiporter; E=0.002 PFAM: PF01699; Sodium/calcium exchanger protei; E=4.9e-05; sodium/calcium exchanger antiporter 4284103 ncx 1797205 ncx Rhodopirellula baltica SH 1 sodium/calcium exchanger antiporter NP_868143.1 4282805 D 243090 CDS NP_868144.1 32475150 1796888 4284304..4286895 1 NC_005027.1 hypothetical protein 4286895 1796888 RB8018 Rhodopirellula baltica SH 1 hypothetical protein NP_868144.1 4284304 D 243090 CDS NP_868145.1 32475151 1792545 complement(4284682..4285233) 1 NC_005027.1 PMID: 98295987 best DB hits: BLAST: pir:A70985; probable polyketide synthase - Mycobacterium; E=0.69; polyketide synthase 4285233 1792545 RB8019 Rhodopirellula baltica SH 1 polyketide synthase NP_868145.1 4284682 R 243090 CDS NP_868146.1 32475152 1790387 4286892..4288223 1 NC_005027.1 signal peptide 4288223 1790387 RB8022 Rhodopirellula baltica SH 1 signal peptide NP_868146.1 4286892 D 243090 CDS NP_868147.1 32475153 1790608 4288220..4289278 1 NC_005027.1 best DB hits: BLAST: pir:E82768; conserved hypothetical protein XF0752 [imported] -; E=4e-30 pir:A82381; conserved hypothetical protein VCA1077 [imported] -; E=1e-26 gb:AAF47337.1; (AE003467) CG7049 gene product [Drosophila; E=5e-19 COG: XF0752_2; COG1262 Uncharacterized BCR; E=9e-30; hypothetical protein 4289278 1790608 RB8026 Rhodopirellula baltica SH 1 hypothetical protein NP_868147.1 4288220 D 243090 CDS NP_868148.1 32475154 1796078 4289305..4290003 1 NC_005027.1 hypothetical protein 4290003 1796078 RB8027 Rhodopirellula baltica SH 1 hypothetical protein NP_868148.1 4289305 D 243090 CDS NP_868149.1 32475155 1797208 4289867..4291702 1 NC_005027.1 PMID: 99426839 best DB hits: BLAST: gb:AAF80365.1; AF159160_1 (AF159160) serinethreonine kinase Pkn10; E=6e-50 swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=3e-46 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=7e-44 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=7e-45 PFAM: PF00069; Protein kinase domain; E=1.6e-64; serine/threonine kinase Pkn10 4291702 pknB 1797208 pknB Rhodopirellula baltica SH 1 serine/threonine kinase Pkn10 NP_868149.1 4289867 D 243090 CDS NP_868150.1 32475156 1796735 complement(4291888..4292625) 1 NC_005027.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 4292625 fabG 1796735 fabG Rhodopirellula baltica SH 1 3-ketoacyl-ACP reductase NP_868150.1 4291888 R 243090 CDS NP_868151.1 32475157 1794975 4292674..4294116 1 NC_005027.1 PMID: 1755850 PMID: 8001980 PMID: 1522213 PMID: 7668283 PMID: 7795586 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=4e-24 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=4e-23 gb:AAF58475.1; (AE003821) CG8646 gene product [Drosophila; E=1e-22 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=1e-14 PFAM: PF00884; Sulfatase; E=9.4e-37; N-acetylgalactosamine 6-sulfate sulfatase (GALNS) 4294116 GALNS 1794975 GALNS Rhodopirellula baltica SH 1 N-acetylgalactosamine 6-sulfate sulfatase (GALNS) NP_868151.1 4292674 D 243090 CDS NP_868152.1 32475158 1794498 complement(4294183..4295373) 1 NC_005027.1 best DB hits: BLAST: swissprot:O34499; YKGB_BACSU HYPOTHETICAL 38.4 KDA PROTEIN IN; E=1e-43 embl:CAB66198.1; (AL136502) hypothetical protein SCF43.09.; E=1e-31 embl:CAC13069.1; (AL445503) secreted protein; E=6e-31 COG: BS_ykgB; COG2706 3-carboxymuconate cyclase; E=1e-44; 3-carboxymuconate cyclase 4295373 ybhE 1794498 ybhE Rhodopirellula baltica SH 1 3-carboxymuconate cyclase NP_868152.1 4294183 R 243090 CDS NP_868153.1 32475159 1792418 4295344..4295787 1 NC_005027.1 hypothetical protein 4295787 1792418 RB8034 Rhodopirellula baltica SH 1 hypothetical protein NP_868153.1 4295344 D 243090 CDS NP_868154.1 32475160 1796331 4295792..4297138 1 NC_005027.1 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane component 4297138 trkA 1796331 trkA Rhodopirellula baltica SH 1 potassium transporter peripheral membrane component NP_868154.1 4295792 D 243090 CDS NP_868155.1 32475161 1797162 4296997..4298454 1 NC_005027.1 PMID: 2997734 best DB hits: BLAST: pir:C83025; probable phosphoserine phosphatase PA4960 [imported] -; E=1e-108 pir:E70860; probable serB2 protein - Mycobacterium tuberculosis; E=1e-60 pir:T36772; probable phosphoserine phosphatase - Streptomyces; E=1e-57 COG: PA4960_2; COG0560 Phosphoserine phosphatase; E=5e-70 PA4960_1; COG2716 ACT domain-containing protein; E=3e-31 jhp0597; COG0560 Phosphoserine phosphatase; E=6e-26 PFAM: PF01842; ACT domain; E=0.052 PF00702; haloacid dehalogenase-like hy; E=3.6e-26; phosphoserine phosphatase 4298454 serB 1797162 serB Rhodopirellula baltica SH 1 phosphoserine phosphatase NP_868155.1 4296997 D 243090 CDS NP_868156.1 32475162 1790060 4298294..4302439 1 NC_005027.1 PMID: 8943290 best DB hits: BLAST: pir:E70627; hypothetical protein Rv0266c - Mycobacterium tuberculosis; E=0.0 pir:S77037; hypothetical protein slr0697 - Synechocystis sp. (strain; E=0.0 swissprot:P97608; OPLA_RAT 5-OXOPROLINASE (5-OXO-L-PROLINASE); E=1e-153 COG: Rv0266c_1; COG0145 N-methylhydaintoinase A; E=2e-99 slr0697_2; COG0146 N-methylhydaintoinase B; E=9e-85 YKL215c_1; COG0145 N-methylhydaintoinase A; E=6e-73 PFAM: PF01968; Hydantoinase/oxoprolinase; E=0.00018 PF02538; Hydantoinase B/oxoprolinase; E=1.7e-167; 5-oxoprolinase 4302439 OPLAH 1790060 OPLAH Rhodopirellula baltica SH 1 5-oxoprolinase NP_868156.1 4298294 D 243090 CDS NP_868157.1 32475163 1791994 complement(4302446..4307233) 1 NC_005027.1 best DB hits: PFAM: PF01011; PQQ enzyme repeat; E=0.48 PF00515; TPR Domain; E=0.0026 PF01011; PQQ enzyme repeat; E=0.16; oxidoreductase 4307233 1791994 RB8039 Rhodopirellula baltica SH 1 oxidoreductase NP_868157.1 4302446 R 243090 CDS NP_868158.1 32475164 1792663 complement(4307428..4308630) 1 NC_005027.1 PMID: 98230330 best DB hits: BLAST: embl:CAA67986.1; (X99672) devC [Anabaena sp.]; E=2e-57 embl:CAA05976.1; (AJ003195) membrane spanning subunit [Anabaena; E=7e-57 pir:S76812; hypothetical protein - Synechocystis sp. (strain PCC; E=4e-53 COG: Rv0072; COG0577 Predicted permease; E=0.008 PFAM: PF02687; Predicted permease; E=5.7e-12; exporter subunit devC- ABC transporter family protein 4308630 devC 1792663 devC Rhodopirellula baltica SH 1 exporter subunit devC- ABC transporter family protein NP_868158.1 4307428 R 243090 CDS NP_868159.1 32475165 1796497 complement(4308630..4309100) 1 NC_005027.1 PMID: 1406588 best DB hits: BLAST: pir:G82098; conserved hypothetical protein VC2272 [imported] -; E=4e-30 swissprot:P25538; YBAD_ECOLI HYPOTHETICAL 17.2 KD PROTEIN IN; E=2e-28 pir:E72221; conserved hypothetical protein - Thermotoga maritima; E=4e-28 COG: VC2272; COG1327 Predicted transcriptional regulator, consists of a; E=4e-31 PFAM: PF02644; Uncharacterized BCR, COG1327; E=5.2e-62; NrdR family transcriptional regulator 4309100 nrdR 1796497 nrdR Rhodopirellula baltica SH 1 NrdR family transcriptional regulator NP_868159.1 4308630 R 243090 CDS NP_868160.1 32475166 1791691 complement(4309175..4309393) 1 NC_005027.1 hypothetical protein 4309393 1791691 RB8050 Rhodopirellula baltica SH 1 hypothetical protein NP_868160.1 4309175 R 243090 CDS NP_868161.1 32475167 1790362 4309427..4310107 1 NC_005027.1 PMID: 98295987 best DB hits: BLAST: pir:G70979; hypothetical protein Rv3278c - Mycobacterium; E=0.59 PFAM: PF01944; Integral membrane protein DUF95; E=0.0077; hypothetical protein 4310107 1790362 RB8052 Rhodopirellula baltica SH 1 hypothetical protein NP_868161.1 4309427 D 243090 CDS NP_868162.1 32475168 1797196 4310110..4310499 1 NC_005027.1 PMID: 2509712 best DB hits: BLAST: swissprot:P18746; ZO26_XENLA OOCYTE ZINC FINGER PROTEIN XLCOF26; E=0.84; hypothetical protein 4310499 1797196 RB8054 Rhodopirellula baltica SH 1 hypothetical protein NP_868162.1 4310110 D 243090 CDS NP_868163.1 32475169 1790309 complement(4310613..4311851) 1 NC_005027.1 signal peptide 4311851 1790309 RB8055 Rhodopirellula baltica SH 1 signal peptide NP_868163.1 4310613 R 243090 CDS NP_868164.1 32475170 1793629 complement(4311931..4313712) 1 NC_005027.1 hypothetical protein 4313712 1793629 RB8056 Rhodopirellula baltica SH 1 hypothetical protein NP_868164.1 4311931 R 243090 CDS NP_868165.1 32475171 1792405 4313654..4314058 1 NC_005027.1 hypothetical protein 4314058 1792405 RB8059 Rhodopirellula baltica SH 1 hypothetical protein NP_868165.1 4313654 D 243090 CDS NP_868166.1 32475172 1791677 complement(4314080..4314925) 1 NC_005027.1 PMID: 7590303 PMID: 2987648 best DB hits: BLAST: gb:AAF73591.1; (AE002337) spoU rRNA methylase; E=2e-27 pir:C72066; rRNA methylase - Chlamydophila pneumoniae (strain; E=5e-27 pir:A75448; rRNA methylase - Deinococcus radiodurans (strain R1); E=2e-26 COG: CPn0530; COG0566 rRNA methylases; E=5e-28 PFAM: PF00588; SpoU rRNA Methylase; E=4.7e-24; spoU rRNA methylase 4314925 spoU 1791677 spoU Rhodopirellula baltica SH 1 spoU rRNA methylase NP_868166.1 4314080 R 243090 CDS NP_868167.1 32475173 1791773 4314897..4316168 1 NC_005027.1 PMID: 97426617 best DB hits: BLAST: pir:C65084; hypothetical protein b2981 - Escherichia coli (strain; E=9e-35; hypothetical protein 4316168 1791773 RB8061 Rhodopirellula baltica SH 1 hypothetical protein NP_868167.1 4314897 D 243090 CDS NP_868168.1 32475174 1795953 4316165..4318267 1 NC_005027.1 PMID: 92332449 best DB hits: BLAST: pir:E82133; ATP-dependent helicase, DinG family VC1990 [imported] -; E=4e-87 swissprot:P76257; YOAA_ECOLI PROBABLE ATP-DEPENDENT HELICASE YOAA; E=2e-84 gb:AAG56797.1; AE005403_8 (AE005403) enzyme [Escherichia; E=5e-84 COG: VC1990; COG1199 Rad3-related DNA helicases; E=4e-88 PFAM: PF00270; DEAD/DEAH box helicase; E=0.00011 PF00271; Helicase conserved C-terminal; E=0.5; ATP-dependent helicase DinG 4318267 yoaA 1795953 yoaA Rhodopirellula baltica SH 1 ATP-dependent helicase DinG NP_868168.1 4316165 D 243090 CDS NP_868169.1 32475175 1796665 complement(4318222..4318440) 1 NC_005027.1 hypothetical protein 4318440 1796665 RB8064 Rhodopirellula baltica SH 1 hypothetical protein NP_868169.1 4318222 R 243090 CDS NP_868170.1 32475176 1796218 complement(4318424..4318540) 1 NC_005027.1 hypothetical protein 4318540 1796218 RB8065 Rhodopirellula baltica SH 1 hypothetical protein NP_868170.1 4318424 R 243090 CDS NP_868171.1 32475177 1796175 complement(4318519..4318635) 1 NC_005027.1 hypothetical protein 4318635 1796175 RB8066 Rhodopirellula baltica SH 1 hypothetical protein NP_868171.1 4318519 R 243090 CDS NP_868172.1 32475178 1791203 complement(4318645..4318842) 1 NC_005027.1 hypothetical protein 4318842 1791203 RB8067 Rhodopirellula baltica SH 1 hypothetical protein NP_868172.1 4318645 R 243090 CDS NP_868173.1 32475179 1794754 4318894..4319541 1 NC_005027.1 signal peptide 4319541 1794754 RB8068 Rhodopirellula baltica SH 1 signal peptide NP_868173.1 4318894 D 243090 CDS NP_868174.1 32475180 1794102 4319538..4319717 1 NC_005027.1 hypothetical protein 4319717 1794102 RB8070 Rhodopirellula baltica SH 1 hypothetical protein NP_868174.1 4319538 D 243090 CDS NP_868175.1 32475181 1790323 4319838..4322033 1 NC_005027.1 PMID: 2808524 PMID: 8276898 PMID: 2497103 best DB hits: BLAST: swissprot:P13395; SPCA_DROME SPECTRIN ALPHA CHAIN ----- pir:; E=0.46 gb:AAF47569.1; (AE003472) alpha-Spec gene product [alt 2]; E=0.46; spectrin alpha chain 4322033 1790323 RB8071 Rhodopirellula baltica SH 1 spectrin alpha chain NP_868175.1 4319838 D 243090 CDS NP_868176.1 32475182 1790665 4322176..4323276 1 NC_005027.1 PMID: 20125575 best DB hits: BLAST: ddbj:BAB05586.1; (AP001513) BH1867~unknown conserved protein; E=1e-23 pir:B59296; alpha-L-arabinofuranosidase II [validated] -; E=6e-19 embl:CAB89837.1; (AJ242516) hypothetical protein [Salmonella; E=1e-18; alpha-L-arabinofuranosidase 4323276 abf2 1790665 abf2 Rhodopirellula baltica SH 1 alpha-L-arabinofuranosidase NP_868176.1 4322176 D 243090 CDS NP_868177.1 32475183 1791550 4323454..4323975 1 NC_005027.1 PMID: 11466286 best DB hits: BLAST: embl:CAB93380.1; (AL357523) hypothetical protein [Streptomyces; E=1e-12 swissprot:Q52673; YQGF_RHOCA HYPOTHETICAL 17.1 KDA PROTEIN -----; E=4e-12 swissprot:Q9ZDJ8; Y330_RICPR HYPOTHETICAL PROTEIN RP330 -----; E=2e-11 COG: RP330; COG0816 Predicted endonuclease involved in recombination; E=2e-12; an endonuclease 4323975 1791550 RB8076 Rhodopirellula baltica SH 1 an endonuclease NP_868177.1 4323454 D 243090 CDS NP_868178.1 32475184 1791996 4324046..4325737 1 NC_005027.1 signal peptide 4325737 1791996 RB8077 Rhodopirellula baltica SH 1 signal peptide NP_868178.1 4324046 D 243090 CDS NP_868179.1 32475185 1790876 4325750..4327261 1 NC_005027.1 PMID: 7910580 PMID: 1572648 best DB hits: BLAST: swissprot:P50428; ARSA_MOUSE ARYLSULFATASE A PRECURSOR (ASA); E=1e-56 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=4e-55 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=4e-55 COG: aslA; COG3119 Arylsulfatase A and related enzymes; E=2e-31 PFAM: PF00884; Sulfatase; E=1.6e-47; arylsulfatase 4327261 arsA 1790876 arsA Rhodopirellula baltica SH 1 arylsulfatase NP_868179.1 4325750 D 243090 CDS NP_868180.1 32475186 1790912 complement(4327230..4327388) 1 NC_005027.1 hypothetical protein 4327388 1790912 RB8079 Rhodopirellula baltica SH 1 hypothetical protein NP_868180.1 4327230 R 243090 CDS NP_868181.1 32475187 1792914 complement(4327385..4328146) 1 NC_005027.1 PMID: 2664449 best DB hits: BLAST: swissprot:P74561; HIS4_SYNY3; E=3e-56 pir:A83003; phosphoribosylformimino-5-aminoimidazole carboxamide; E=5e-49 gb:AAF05093.1; AF150930_2 (AF150930) phosphoribosyl; E=2e-46 COG: slr0652; COG0106 Phosphoribosylformimino-5-aminoimidazole; E=3e-57 PA5141; COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide; E=5e-50 NMB0629; COG0106 Phosphoribosylformimino-5-aminoimidazole; E=6e-44 PFAM: PF00977; Histidine biosynthesis protein; E=4.7e-70; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 4328146 hisA 1792914 hisA Rhodopirellula baltica SH 1 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase NP_868181.1 4327385 R 243090 CDS NP_868182.1 32475188 1790843 4328116..4329816 1 NC_005027.1 best DB hits: BLAST: pir:S75597; hypothetical protein slr1343 - Synechocystis sp. (strain; E=6e-94 gb:AAG19190.1; (AE005016) Vng0705c [Halobacterium sp. NRC-1]; E=2e-91 pir:G82413; conserved hypothetical protein VCA0809 [imported] -; E=2e-83 COG: slr1343; COG3046 Deoxyribodipyrimidine photolyase-related proteins; E=6e-95; a deoxyribodipyrimidine photolyase-like protein 4329816 1790843 RB8082 Rhodopirellula baltica SH 1 a deoxyribodipyrimidine photolyase-like protein NP_868182.1 4328116 D 243090 CDS NP_868183.1 32475189 1796435 complement(4329890..4330006) 1 NC_005027.1 hypothetical protein 4330006 1796435 RB8084 Rhodopirellula baltica SH 1 hypothetical protein NP_868183.1 4329890 R 243090 CDS NP_868184.1 32475190 1790607 4330030..4331517 1 NC_005027.1 PMID: 11705915 best DB hits: BLAST: gb:AAG31169.1; (AF314961) unknown [Salmonella typhimurium]; E=0.70 PFAM: PF01011; PQQ enzyme repeat; E=0.017; PQQ repeat-containing protein 4331517 1790607 RB8085 Rhodopirellula baltica SH 1 PQQ repeat-containing protein NP_868184.1 4330030 D 243090 CDS NP_868185.1 32475191 1791032 complement(4331518..4332285) 1 NC_005027.1 signal peptide 4332285 1791032 RB8089 Rhodopirellula baltica SH 1 signal peptide NP_868185.1 4331518 R 243090 CDS NP_868186.1 32475192 1796070 complement(4332254..4334476) 1 NC_005027.1 PMID: 20039618 best DB hits: BLAST: ddbj:BAA86452.1; (AB032964) KIAA1138 protein [Homo sapiens]; E=0.74; hypothetical protein 4334476 1796070 RB8091 Rhodopirellula baltica SH 1 hypothetical protein NP_868186.1 4332254 R 243090 CDS NP_868187.1 32475193 1796319 complement(4334451..4335641) 1 NC_005027.1 signal peptide 4335641 1796319 RB8093 Rhodopirellula baltica SH 1 signal peptide NP_868187.1 4334451 R 243090 CDS NP_868188.1 32475194 1792600 complement(4335638..4335838) 1 NC_005027.1 hypothetical protein 4335838 1792600 RB8095 Rhodopirellula baltica SH 1 hypothetical protein NP_868188.1 4335638 R 243090 CDS NP_868189.1 32475195 1793938 complement(4335851..4337122) 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.86; signal peptide 4337122 1793938 RB8096 Rhodopirellula baltica SH 1 signal peptide NP_868189.1 4335851 R 243090 CDS NP_868190.1 32475196 1796539 complement(4337119..4337334) 1 NC_005027.1 hypothetical protein 4337334 1796539 RB8098 Rhodopirellula baltica SH 1 hypothetical protein NP_868190.1 4337119 R 243090 CDS NP_868191.1 32475197 1791354 4337464..4337715 1 NC_005027.1 hypothetical protein 4337715 1791354 RB8100 Rhodopirellula baltica SH 1 hypothetical protein NP_868191.1 4337464 D 243090 CDS NP_868192.1 32475198 1792955 4337684..4337875 1 NC_005027.1 hypothetical protein 4337875 1792955 RB8101 Rhodopirellula baltica SH 1 hypothetical protein NP_868192.1 4337684 D 243090 CDS NP_868193.1 32475199 1796493 complement(4337885..4339048) 1 NC_005027.1 PMID: 1588814 PMID: 1309616 best DB hits: BLAST: pir:E83258; general secretion pathway protein G PA3101 [imported]; E=0.063 gb:AAC83358.1; (AF092918) outer membrane secretion protein T; E=0.069 gb:AAC79845.1; (AF089753) cellulose-binding protein CbpC; E=0.24 COG: PA3101; COG2165 General secretory pathway proteins G and H and; E=0.006 PFAM: PF02361; Cobalt transport protein; E=0.11 PF00114; Pilin (bacterial filament); E=0.011; general secretion pathway protein G 4339048 1796493 RB8102 Rhodopirellula baltica SH 1 general secretion pathway protein G NP_868193.1 4337885 R 243090 CDS NP_868194.1 32475200 1794762 4338942..4339313 1 NC_005027.1 hypothetical protein 4339313 1794762 RB8103 Rhodopirellula baltica SH 1 hypothetical protein NP_868194.1 4338942 D 243090 CDS NP_868195.1 32475201 1790221 4339329..4340276 1 NC_005027.1 hypothetical protein 4340276 1790221 RB8107 Rhodopirellula baltica SH 1 hypothetical protein NP_868195.1 4339329 D 243090 CDS NP_868196.1 32475202 1794016 complement(4340324..4343143) 1 NC_005027.1 hypothetical protein 4343143 1794016 RB8108 Rhodopirellula baltica SH 1 hypothetical protein NP_868196.1 4340324 R 243090 CDS NP_868197.1 32475203 1796403 complement(4343127..4344044) 1 NC_005027.1 PMID: 1924314 PMID: 8088782 best DB hits: BLAST: pir:T36523; probable ABC-type transport system ATP-binding protein -; E=4e-37 pir:C72303; ABC transporter ATP-binding protein - Thermotoga; E=6e-34 gb:AAF81232.1; (AF263012) ABC transporter ATP binding protein; E=9e-33 COG: TM1028; COG1131 ABC-type multidrug transport system, ATPase; E=5e-35 PFAM: PF00005; ABC transporter; E=5e-43; ABC transporter ATP-binding protein 4344044 1796403 RB8113 Rhodopirellula baltica SH 1 ABC transporter ATP-binding protein NP_868197.1 4343127 R 243090 CDS NP_868198.1 32475204 1793939 complement(4344172..4344669) 1 NC_005027.1 best DB hits: BLAST: pir:G69999; transcriptional regulator GntR related protein ytrA -; E=4e-13 pir:D72336; transcriptional regulator, GntR family - Thermotoga; E=9e-13 gb:AAC62421.1; (AF084104) hypothetical protein [Bacillus firmus]; E=1e-08 COG: BS_ytrA; COG1725 Predicted transcriptional regulators; E=4e-14 BH1940; COG1167 Transcriptional regulators containing a; E=3e-06 BH1164; COG1725 Predicted transcriptional regulators; E=5e-06 PFAM: PF00392; Bacterial regulatory proteins, gntR; E=0.0001; GntR family transcriptional regulator 4344669 gntR 1793939 gntR Rhodopirellula baltica SH 1 GntR family transcriptional regulator NP_868198.1 4344172 R 243090 CDS NP_868199.1 32475205 1795362 4344626..4346503 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB06996.1; (AP001518) spore cortex protein [Bacillus; E=0.022 COG: BH3277; COG2244 Membrane protein involved in the export of O-antigen; E=0.002 PFAM: PF01943; Polysaccharide biosynthesis pro; E=0.05; spore cortex protein- membrane protein involved in the export of O-antigen and teichoic acid 4346503 1795362 RB8117 Rhodopirellula baltica SH 1 spore cortex protein- membrane protein involved in the export of O-antigen and teichoic acid NP_868199.1 4344626 D 243090 CDS NP_868200.1 32475206 1796399 4346427..4346855 1 NC_005027.1 hypothetical protein 4346855 1796399 RB8119 Rhodopirellula baltica SH 1 hypothetical protein NP_868200.1 4346427 D 243090 CDS NP_868201.1 32475207 1795859 4346827..4347360 1 NC_005027.1 PMID: 7806516 best DB hits: BLAST: gb:AAF98278.1; AF197933_8 (AF197933) beta-hydroxyacyl-ACP; E=2e-14 gb:AAK04875.1; AE006311_6 (AE006311); E=3e-14 pir:C82731; (3r)-hydroxymyristoyl ACP dehydrase XF1044 [imported] -; E=6e-14 COG: XF1044; COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier; E=6e-15 PFAM: PF01377; Thioester dehydrase; E=2.1e-18 PF01575; MaoC like domain; E=0.0056; beta-hydroxyacyl-ACP dehydratase 4347360 fabZ 1795859 fabZ Rhodopirellula baltica SH 1 beta-hydroxyacyl-ACP dehydratase NP_868201.1 4346827 D 243090 CDS NP_868202.1 32475208 1794186 4347357..4348190 1 NC_005027.1 PMID: 20138198 best DB hits: BLAST: gb:AAF05840.1; AF197058_1 (AF197058) trans-2-enoyl-ACP reductase; E=6e-31 ddbj:BAB06562.1; (AP001516) enoyl-[acyl-carrier protein]; E=5e-29 gb:AAD04184.1; (L10036) unknown [Nostoc sp. PCC 7120]; E=2e-28 COG: BH2843; COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH); E=5e-30 TM0441; COG1028 Dehydrogenases with different specificities (related; E=1e-09 BS_yfhR; COG1028 Dehydrogenases with different specificities; E=1e-06 PFAM: PF00678; Short chain dehydrogenase/redu; E=7.1e-05; trans-2-enoyl-ACP reductase 4348190 fabI 1794186 fabI Rhodopirellula baltica SH 1 trans-2-enoyl-ACP reductase NP_868202.1 4347357 D 243090 CDS NP_868203.1 32475209 1791693 4348269..4349126 1 NC_005027.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 4349126 ilvE 1791693 ilvE Rhodopirellula baltica SH 1 branched-chain amino acid aminotransferase NP_868203.1 4348269 D 243090 CDS NP_868204.1 32475210 1791532 4349191..4349979 1 NC_005027.1 hypothetical protein 4349979 1791532 RB8127 Rhodopirellula baltica SH 1 hypothetical protein NP_868204.1 4349191 D 243090 CDS NP_868205.1 32475211 1793388 4349972..4350505 1 NC_005027.1 hypothetical protein 4350505 1793388 RB8132 Rhodopirellula baltica SH 1 hypothetical protein NP_868205.1 4349972 D 243090 CDS NP_868206.1 32475212 1796443 4350477..4351796 1 NC_005027.1 PMID: 93188700 best DB hits: BLAST: embl:CAA19102.1; (AL023591) hypothetical protein MLCB1259.27; E=1e-95 swissprot:Q50739; YP59_MYCTU HYPOTHETICAL 47.5 KDA PROTEIN RV2559C; E=2e-91 embl:CAB93386.1; (AL357523) conserved ATPGTP binding protein; E=2e-90 COG: Rv2559c; COG2256 Uncharacterized ATPase related to the helicase; E=2e-92 ycaJ; COG2256 Uncharacterized ATPase related to the helicase subunit; E=4e-86 HI1590; COG2256 Uncharacterized ATPase related to the helicase; E=1e-85 PFAM: PF01057; Parvovirus non-structural pro; E=0.099 PF00910; RNA helicase; E=0.0011 PF00004; ATPase associated with; E=7.6e-20; recombination factor protein RarA 4351796 1796443 RB8134 Rhodopirellula baltica SH 1 recombination factor protein RarA NP_868206.1 4350477 D 243090 CDS NP_868207.1 32475213 1796388 complement(4351882..4352109) 1 NC_005027.1 hypothetical protein 4352109 1796388 RB8137 Rhodopirellula baltica SH 1 hypothetical protein NP_868207.1 4351882 R 243090 CDS NP_868208.1 32475214 1791467 4351960..4352187 1 NC_005027.1 hypothetical protein 4352187 1791467 RB8138 Rhodopirellula baltica SH 1 hypothetical protein NP_868208.1 4351960 D 243090 CDS NP_868209.1 32475215 1793211 complement(4352189..4353931) 1 NC_005027.1 best DB hits: BLAST: pir:T47011; hypothetical protein [imported] - Yersinia pestis; E=0.020 embl:CAB58305.1; (AL121854) hypothetical protein SCJ33.06c; E=0.11 pir:E69891; cytochrome c biogenesis protein CycX homolog homolog; E=0.28; hypothetical protein 4353931 1793211 RB8140 Rhodopirellula baltica SH 1 hypothetical protein NP_868209.1 4352189 R 243090 CDS NP_868210.1 32475216 1797151 complement(4353961..4354179) 1 NC_005027.1 hypothetical protein 4354179 1797151 RB8143 Rhodopirellula baltica SH 1 hypothetical protein NP_868210.1 4353961 R 243090 CDS NP_868211.1 32475217 1796430 complement(4354191..4354622) 1 NC_005027.1 hypothetical protein 4354622 1796430 RB8144 Rhodopirellula baltica SH 1 hypothetical protein NP_868211.1 4354191 R 243090 CDS NP_868212.1 32475218 1796281 complement(4354667..4355122) 1 NC_005027.1 hypothetical protein 4355122 1796281 RB8146 Rhodopirellula baltica SH 1 hypothetical protein NP_868212.1 4354667 R 243090 CDS NP_868213.1 32475219 1791005 4355339..4355551 1 NC_005027.1 PMID: 8393005 PMID: 7751274 PMID: 9211896 best DB hits: BLAST: ddbj:BAB07336.1; (AP001519) carbon storage regulator [Bacillus; E=2e-07 swissprot:O83663; CSRA_TREPA CARBON STORAGE REGULATOR HOMOLOG; E=5e-07 swissprot:P44879; CSRA_HAEIN CARBON STORAGE REGULATOR HOMOLOG; E=6e-06 COG: BH3617; COG1551 Carbon storage regulator (could also regulate; E=2e-08 PFAM: PF02599; Carbon storage regulator; E=8.9e-27; carbon storage regulator 4355551 csrA 1791005 csrA Rhodopirellula baltica SH 1 carbon storage regulator NP_868213.1 4355339 D 243090 CDS NP_868214.1 32475220 1797168 complement(4356002..4357339) 1 NC_005027.1 signal peptide 4357339 1797168 RB8150 Rhodopirellula baltica SH 1 signal peptide NP_868214.1 4356002 R 243090 CDS NP_868215.1 32475221 1790505 4357496..4357870 1 NC_005027.1 best DB hits: BLAST: pir:C75577; conserved hypothetical protein - Deinococcus radiodurans; E=1e-13 pir:E70324; conserved hypothetical protein aq_268 - Aquifex aeolicus; E=3e-07 swissprot:P44675; YFHP_HAEIN HYPOTHETICAL PROTEIN HI0379 -----; E=2e-04 COG: DRA0242; COG1959 Predicted transcriptional regulator; E=1e-14 PFAM: PF02082; Uncharacterized protein family UPF00; E=6.3e-10; a transcriptional regulator 4357870 1790505 RB8152 Rhodopirellula baltica SH 1 a transcriptional regulator NP_868215.1 4357496 D 243090 CDS NP_868216.1 32475222 1792725 complement(4357932..4359392) 1 NC_005027.1 PMID: 8168477 PMID: 10360571 best DB hits: BLAST: swissprot:P56727; Y929_THEMA HYPOTHETICAL PROTEIN TM0929 -----; E=1e-09 embl:CAA57668.1; (X82178) orf1 [Thermotoga maritima]; E=0.34 gb:AAA65436.1; (U24145) orf1; upstream of ferrodoxin; Method:; E=0.34; hypothetical protein 4359392 1792725 RB8153 Rhodopirellula baltica SH 1 hypothetical protein NP_868216.1 4357932 R 243090 CDS NP_868217.1 32475223 1790988 complement(4359389..4360483) 1 NC_005027.1 PMID: 99287316 best DB hits: BLAST: pir:B72315; conserved hypothetical protein - Thermotoga maritima; E=1e-25 pir:T35221; probable ATPGTP binding protein - Streptomyces; E=5e-15 pir:A75429; conserved hypothetical protein - Deinococcus radiodurans; E=1e-07 COG: TM0930; COG0714 MoxR-like ATPases; E=1e-26; hypothetical protein 4360483 1790988 RB8157 Rhodopirellula baltica SH 1 hypothetical protein NP_868217.1 4359389 R 243090 CDS NP_868218.1 32475224 1796556 complement(4360522..4361223) 1 NC_005027.1 hypothetical protein 4361223 1796556 RB8158 Rhodopirellula baltica SH 1 hypothetical protein NP_868218.1 4360522 R 243090 CDS NP_868219.1 32475225 1790191 complement(4361220..4361990) 1 NC_005027.1 PMID: 1708495 best DB hits: BLAST: swissprot:P37454; EXOA_BACSU EXODEOXYRIBONUCLEASE ----- pir:; E=7e-78 pir:F64710; exodeoxyribonuclease - Helicobacter pylori (strain; E=3e-72 pir:C71809; exodeoxyribonuclease - Helicobacter pylori (strain J99); E=2e-71 COG: BS_exoA; COG0708 Exonuclease III; E=7e-79 PFAM: PF01181; Deoxyribonuclease I (DNase I); E=0.25 PF01260; AP endonuclease 1; E=2e-108; exodeoxyribonuclease 4361990 exoA 1790191 exoA Rhodopirellula baltica SH 1 exodeoxyribonuclease NP_868219.1 4361220 R 243090 CDS NP_868220.1 32475226 1790232 complement(4361987..4362685) 1 NC_005027.1 best DB hits: BLAST: pir:F75496; conserved hypothetical protein - Deinococcus radiodurans; E=1e-63 gb:AAG19057.1; (AE005004) Vng0533h [Halobacterium sp. NRC-1]; E=5e-34 embl:CAB93731.1; (AL357613) hypothetical protein SC5F8.03c.; E=9e-30 COG: DR0625; COG2013 Uncharacterized ACR; E=1e-64; hypothetical protein 4362685 1790232 RB8163 Rhodopirellula baltica SH 1 hypothetical protein NP_868220.1 4361987 R 243090 CDS NP_868221.1 32475227 1796382 complement(4362702..4362863) 1 NC_005027.1 hypothetical protein 4362863 1796382 RB8165 Rhodopirellula baltica SH 1 hypothetical protein NP_868221.1 4362702 R 243090 CDS NP_868222.1 32475228 1794460 4362882..4365650 1 NC_005027.1 best DB hits: BLAST: pir:G71299; conserved hypothetical protein TP0648 - syphilis; E=0.027 pir:S49376; hypothetical protein 3 - Pseudomonas aeruginosa -----; E=0.11 pir:F69210; conserved hypothetical protein MTH83 - Methanobacterium; E=0.20 COG: TP0648; COG0457 TPR-repeat-containing proteins; E=0.003 PFAM: PF00515; TPR Domain; E=0.0036; hypothetical protein 4365650 1794460 RB8167 Rhodopirellula baltica SH 1 hypothetical protein NP_868222.1 4362882 D 243090 CDS NP_868223.1 32475229 1795897 4365647..4366831 1 NC_005027.1 PMID: 11259647; hypothetical protein 4366831 1795897 RB8171 Rhodopirellula baltica SH 1 hypothetical protein NP_868223.1 4365647 D 243090 CDS NP_868224.1 32475230 1796400 4366881..4367900 1 NC_005027.1 best DB hits: BLAST: pir:C83106; conserved hypothetical protein PA4322 [imported] -; E=2e-61 pir:G71146; hypothetical protein PH0385 - Pyrococcus horikoshii; E=1e-60 pir:H82493; MoxR-related protein VCA0175 [imported] - Vibrio; E=2e-60 COG: PA4322; COG0714 MoxR-like ATPases; E=2e-62 PFAM: PF00004; ATPase associated with; E=0.0029 PF01078; Magnesium chelatase, subunit; E=1.7e-06; MoxR-related protein 4367900 moxR 1796400 moxR Rhodopirellula baltica SH 1 MoxR-related protein NP_868224.1 4366881 D 243090 CDS NP_868225.1 32475231 1796415 4367851..4368960 1 NC_005027.1 best DB hits: BLAST: swissprot:P71761; YE80_MYCTU HYPOTHETICAL 34.3 KDA PROTEIN RV1480; E=2e-17 pir:G82493; conserved hypothetical protein VCA0174 [imported] -; E=1e-12 pir:H83261; hypothetical protein PA3071 [imported] - Pseudomonas; E=2e-12 COG: Rv1480; COG1721 Uncharacterized ACR; E=1e-18 PFAM: PF01882; Protein of unknown function DUF58; E=8.4e-16; hypothetical protein 4368960 1796415 RB8174 Rhodopirellula baltica SH 1 hypothetical protein NP_868225.1 4367851 D 243090 CDS NP_868226.1 32475232 1796049 4368957..4371071 1 NC_005027.1 PMID: 2450046 PMID: 2446322 PMID: 2462430 PMID: 3663330 PMID: 2476436 PMID: 1384548 best DB hits: BLAST: swissprot:P19823; ITH2_HUMAN INTER-ALPHA-TRYPSIN INHIBITOR HEAVY; E=0.69 ref:XP_011910.1; similar to inter-alpha (globulin) inhibitor, H2; E=0.69; inter-alpha-trypsin inhibitor heavy chain H2 [precursor] 4371071 1796049 RB8176 Rhodopirellula baltica SH 1 inter-alpha-trypsin inhibitor heavy chain H2 [precursor] NP_868226.1 4368957 D 243090 CDS NP_868227.1 32475233 1796096 4371052..4375008 1 NC_005027.1 hypothetical protein 4375008 1796096 RB8177 Rhodopirellula baltica SH 1 hypothetical protein NP_868227.1 4371052 D 243090 CDS NP_868228.1 32475234 1791627 4375005..4377428 1 NC_005027.1 best DB hits: PFAM: PF00672; HAMP domain; E=0.22; hypothetical protein 4377428 1791627 RB8181 Rhodopirellula baltica SH 1 hypothetical protein NP_868228.1 4375005 D 243090 CDS NP_868229.1 32475235 1793549 4377386..4378576 1 NC_005027.1 signal peptide 4378576 1793549 RB8186 Rhodopirellula baltica SH 1 signal peptide NP_868229.1 4377386 D 243090 CDS NP_868230.1 32475236 1790711 4378573..4379352 1 NC_005027.1 best DB hits: BLAST: gb:AAG54864.1; AE005231_11 (AE005231) glyoxylate-induced protein; E=9e-21 gb:AAG59852.1; AF284750_1 (AF284750) HT036-ISO [Homo sapiens]; E=1e-20 swissprot:Q44015; YGB4_ALCEU HYPOTHETICAL 28.3 KDA PROTEIN IN GBD; E=1e-20 COG: gip; COG1082 Predicted endonucleases; E=3e-21; glyoxylate-induced protein 4379352 1790711 RB8188 Rhodopirellula baltica SH 1 glyoxylate-induced protein NP_868230.1 4378573 D 243090 CDS NP_868231.1 32475237 1796998 complement(4379339..4382134) 1 NC_005027.1 PMID: 8056751 best DB hits: BLAST: pir:G82830; ATP-dependent RNA helicase XF0252 [imported] - Xylella; E=1e-151 swissprot:Q11039; DEAD_MYCTU COLD-SHOCK DEAD-BOX PROTEIN A HOMOLOG; E=1e-128 pir:JX0314; DEAD box protein - Klebsiella pneumoniae ----- gb:; E=1e-128 COG: XF0252; COG0513 Superfamily II DNA and RNA helicases; E=1e-152 PFAM: PF00270; DEAD/DEAH box helicase; E=9.2e-70 PF00271; Helicase conserved C-terminal doma; E=7.8e-35; ATP-dependent RNA helicase 4382134 deaD 1796998 deaD Rhodopirellula baltica SH 1 ATP-dependent RNA helicase NP_868231.1 4379339 R 243090 CDS NP_868232.1 32475238 1791497 4382096..4382314 1 NC_005027.1 hypothetical protein 4382314 1791497 RB8191 Rhodopirellula baltica SH 1 hypothetical protein NP_868232.1 4382096 D 243090 CDS NP_868233.1 32475239 1793116 complement(4382297..4382404) 1 NC_005027.1 hypothetical protein 4382404 1793116 RB8192 Rhodopirellula baltica SH 1 hypothetical protein NP_868233.1 4382297 R 243090 CDS NP_868234.1 32475240 1795975 4382501..4382656 1 NC_005027.1 hypothetical protein 4382656 1795975 RB8193 Rhodopirellula baltica SH 1 hypothetical protein NP_868234.1 4382501 D 243090 CDS NP_868235.1 32475241 1796050 4382684..4383916 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein 4383916 1796050 RB8194 Rhodopirellula baltica SH 1 hypothetical protein NP_868235.1 4382684 D 243090 CDS NP_868236.1 32475242 1792385 complement(4383964..4384356) 1 NC_005027.1 hypothetical protein 4384356 1792385 RB8195 Rhodopirellula baltica SH 1 hypothetical protein NP_868236.1 4383964 R 243090 CDS NP_868237.1 32475243 1790918 4384410..4385729 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.0077; hypothetical protein 4385729 1790918 RB8199 Rhodopirellula baltica SH 1 hypothetical protein NP_868237.1 4384410 D 243090 CDS NP_868238.1 32475244 1791201 complement(4385820..4386506) 1 NC_005027.1 PMID: 8407798 best DB hits: BLAST: swissprot:P50619; YMAB_BACSU HYPOTHETICAL 23.4 KD PROTEIN IN; E=1e-17 pir:G72261; conserved hypothetical protein - Thermotoga maritima; E=9e-13; hypothetical protein 4386506 1791201 RB8202 Rhodopirellula baltica SH 1 hypothetical protein NP_868238.1 4385820 R 243090 CDS NP_868239.1 32475245 1795043 complement(4386548..4387249) 1 NC_005027.1 PMID: 95134354 best DB hits: BLAST: embl:CAA52615.1; (X74509) N-methylpurine-DNA glycosirase (MPG); E=9e-26 pdb:1F4R; A Chain A, Crystal Structure Of The Human Aag Dna Repair; E=3e-22 gb:AAA58369.1; (M71215) alkyl-N-purine-DNA glycosylasee [Homo; E=5e-22 COG: APE2247; COG2094 3-methyladenine DNA glycosylase; E=8e-18 PFAM: PF02245; Methylpurine-DNA glycosylase (M; E=2.2e-44; N-methylpurine-DNA glycosirase (MPG) 4387249 mpg 1795043 mpg Rhodopirellula baltica SH 1 N-methylpurine-DNA glycosirase (MPG) NP_868239.1 4386548 R 243090 CDS NP_868240.1 32475246 1796547 4387234..4388472 1 NC_005027.1 PMID: 7592318 best DB hits: BLAST: ddbj:BAB05411.1; (AP001512) BH1692~unknown conserved protein in; E=1e-18 swissprot:Q9RW45; Y824_DEIRA HYPOTHETICAL PROTEIN DR0824 -----; E=1e-16 swissprot:O27549; YF05_METTH HYPOTHETICAL PROTEIN MTH1505 -----; E=5e-16 COG: BH1692; COG0402 Cytosine deaminase and related metal-dependent; E=1e-19 PFAM: PF00744; Dihydroorotase-like; E=0.025 PF01979; Adenine deaminase; E=0.099 PF00962; Adenosine/AMP deaminase; E=0.05; chlorohydrolase 4388472 trzA 1796547 trzA Rhodopirellula baltica SH 1 chlorohydrolase NP_868240.1 4387234 D 243090 CDS NP_868241.1 32475247 1795423 complement(4388391..4389188) 1 NC_005027.1 best DB hits: PFAM: PF02517; CAAX amino terminal protease; E=0.1; hypothetical protein 4389188 1795423 RB8209 Rhodopirellula baltica SH 1 hypothetical protein NP_868241.1 4388391 R 243090 CDS NP_868242.1 32475248 1790026 complement(4389198..4391078) 1 NC_005027.1 PMID: 1349418 best DB hits: BLAST: ddbj:BAB04170.1; (AP001508) lantibiotic mersacidin transporter; E=5e-21 swissprot:P45861; YWJA_BACSU HYPOTHETICAL ABC TRANSPORTER; E=7e-21 ddbj:BAB04845.1; (AP001511) ABC transporter (ATP-binding protein); E=5e-20 COG: BH0451; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain; E=5e-22 BS_ywjA; COG1132 ABC-type multidrug/protein/lipid transport system,; E=6e-22 VCA1084; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain; E=2e-17 PFAM: PF00005; ABC transporter; E=0.024; lantibiotic mersacidin transporter system 4391078 1790026 RB8210 Rhodopirellula baltica SH 1 lantibiotic mersacidin transporter system NP_868242.1 4389198 R 243090 CDS NP_868243.1 32475249 1791931 complement(4391179..4392948) 1 NC_005027.1 best DB hits: BLAST: pir:S76926; hypothetical protein - Synechocystis sp. (strain PCC; E=1e-06 gb:AAC36156.1; (AF003632) PilI [Myxococcus xanthus]; E=0.016 COG: sll1107; COG1277 Permease component of an ABC-transporter; E=9e-08; membrane bound transporter 4392948 1791931 RB8214 Rhodopirellula baltica SH 1 membrane bound transporter NP_868243.1 4391179 R 243090 CDS NP_868244.1 32475250 1792505 complement(4393113..4393709) 1 NC_005027.1 PMID: 11997336 best DB hits: BLAST: pir:H72201; conserved hypothetical protein - Thermotoga maritima; E=1e-14 pir:A70337; hypothetical protein aq_408 - Aquifex aeolicus -----; E=1e-08; hypothetical protein 4393709 1792505 RB8217 Rhodopirellula baltica SH 1 hypothetical protein NP_868244.1 4393113 R 243090 CDS NP_868245.1 32475251 1794701 4393980..4395161 1 NC_005027.1 PMID: 8907187 PMID: 10029535 best DB hits: BLAST: ddbj:BAB07069.1; (AP001518) aspartate aminotransferase [Bacillus; E=2e-59 embl:CAC11669.1; (AL445064) probable aspartate aminotransferase; E=9e-55 pir:G69119; probable aspartate transaminase (EC 2.6.1.1) MTH1894; E=2e-54 COG: BH3350; COG0436 PLP-dependent aminotransferases; E=2e-60 PFAM: PF01041; DegT/DnrJ/EryC1/StrS family; E=1.5e-05 PF01053; Cys/Met metabolism PLP-depend; E=5.4e-05 PF00222; Aminotransferase class-II; E=0.28; aspartate aminotransferase 4395161 aspC 1794701 aspC Rhodopirellula baltica SH 1 aspartate aminotransferase NP_868245.1 4393980 D 243090 CDS NP_868246.1 32475252 1796787 4395234..4396553 1 NC_005027.1 PMID: 7704274 best DB hits: BLAST: ddbj:BAB06322.1; (AP001516) O-acetylhomoserine sulfhydrylase; E=1e-123 pir:D72324; O-acetylhomoserine sulfhydrylase - Thermotoga maritima; E=1e-114 pir:T40463; O-acetylhomoserine (thiol)-lyase (EC 4.2.99.10) -; E=1e-110 COG: BH2603; COG2873 O-acetylhomoserine sulfhydrylase; E=1e-124 DR0921; COG0626 Cystathionine beta-lyases/cystathionine; E=7e-63 PFAM: PF01053; Cys/Met metabolism PLP-depend; E=6.3e-204; O-acetylhomoserine sulfhydrylase 4396553 1796787 RB8221 Rhodopirellula baltica SH 1 O-acetylhomoserine sulfhydrylase NP_868246.1 4395234 D 243090 CDS NP_868247.1 32475253 1789924 4396604..4398475 1 NC_005027.1 PMID: 9209059 best DB hits: BLAST: swissprot:P57714; METX_PSEAE HOMOSERINE O-ACETYLTRANSFERASE; E=1e-83 swissprot:P94891; METX_LEPME HOMOSERINE O-ACETYLTRANSFERASE; E=7e-78 swissprot:Q9JZQ5; METX_NEIMB HOMOSERINE O-ACETYLTRANSFERASE; E=1e-77 COG: PA0390; COG2021 Homoserine acetyltransferase; E=1e-84 PA0389; COG0500 SAM-dependent methyltransferases; E=2e-26 MTH1820; COG2021 Homoserine acetyltransferase; E=8e-14 PFAM: PF00561; alpha/beta hydrolase fold; E=6.7e-07; homoserine O-acetyltransferase 4398475 metX 1789924 metX Rhodopirellula baltica SH 1 homoserine O-acetyltransferase NP_868247.1 4396604 D 243090 CDS NP_868248.1 32475254 1793493 complement(4398527..4399759) 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein 4399759 1793493 RB8223 Rhodopirellula baltica SH 1 hypothetical protein NP_868248.1 4398527 R 243090 CDS NP_868249.1 32475255 1796455 complement(4399783..4400097) 1 NC_005027.1 signal peptide 4400097 1796455 RB8226 Rhodopirellula baltica SH 1 signal peptide NP_868249.1 4399783 R 243090 CDS NP_868250.1 32475256 1792928 complement(4400186..4400365) 1 NC_005027.1 hypothetical protein 4400365 1792928 RB8227 Rhodopirellula baltica SH 1 hypothetical protein NP_868250.1 4400186 R 243090 CDS NP_868251.1 32475257 1791936 complement(4400412..4401449) 1 NC_005027.1 signal peptide 4401449 1791936 RB8228 Rhodopirellula baltica SH 1 signal peptide NP_868251.1 4400412 R 243090 CDS NP_868252.1 32475258 1795600 4401422..4401721 1 NC_005027.1 hypothetical protein 4401721 1795600 RB8229 Rhodopirellula baltica SH 1 hypothetical protein NP_868252.1 4401422 D 243090 CDS NP_868253.1 32475259 1793718 4401779..4402291 1 NC_005027.1 PMID: 98037514 best DB hits: BLAST: pir:A69115; hypothetical protein MTH1854 - Methanobacterium; E=4e-13 pir:D69083; hypothetical protein MTH162 - Methanobacterium; E=4e-09 gb:AAB89585.1; (AE000988) acetolactate synthase, small subunit,; E=5e-07 PFAM: PF01842; ACT domain; E=0.0014; acetolactate synthase small regulatory subunit 4402291 ilvH 1793718 ilvH Rhodopirellula baltica SH 1 acetolactate synthase small regulatory subunit NP_868253.1 4401779 D 243090 CDS NP_868254.1 32475260 1796504 4402467..4403522 1 NC_005027.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 4403522 hemH 1796504 hemH Rhodopirellula baltica SH 1 ferrochelatase NP_868254.1 4402467 D 243090 CDS NP_868255.1 32475261 1791504 complement(4403418..4404629) 1 NC_005027.1 signal peptide 4404629 1791504 RB8234 Rhodopirellula baltica SH 1 signal peptide NP_868255.1 4403418 R 243090 CDS NP_868256.1 32475262 1794515 4403595..4403942 1 NC_005027.1 hypothetical protein 4403942 1794515 RB8236 Rhodopirellula baltica SH 1 hypothetical protein NP_868256.1 4403595 D 243090 CDS NP_868257.1 32475263 1789908 4403997..4404593 1 NC_005027.1 PMID: 9115640 best DB hits: BLAST: ref:XP_009063.1; TR00071480_p [Homo sapiens]; E=2e-62 swissprot:Q61171; PDX2_MOUSE PEROXIREDOXIN 2 (THIOREDOXIN; E=3e-62 swissprot:P32119; PDX2_HUMAN PEROXIREDOXIN 2 (THIOREDOXIN; E=4e-62 COG: PA0848; COG0450 Thiol - alkyl hydroperoxide reductases; E=4e-60 PFAM: PF00578; AhpC/TSA family; E=1e-71; peroxiredoxin 2 4404593 prdX2 1789908 prdX2 Rhodopirellula baltica SH 1 peroxiredoxin 2 NP_868257.1 4403997 D 243090 CDS NP_868258.1 32475264 1793596 4404615..4405322 1 NC_005027.1 hypothetical protein 4405322 1793596 RB8239 Rhodopirellula baltica SH 1 hypothetical protein NP_868258.1 4404615 D 243090 CDS NP_868259.1 32475265 1790126 4405428..4407911 1 NC_005027.1 PMID: 9804807 best DB hits: BLAST: swissprot:P44973; 60IM_HAEIN 60 KDA INNER-MEMBRANE PROTEIN HOMOLOG; E=7e-31 gb:AAG58902.1; AE005601_8 (AE005601) 60 KD inner-membrane protein; E=4e-30 swissprot:P25714; 60IM_ECOLI 60 KDA INNER-MEMBRANE PROTEIN -----; E=4e-30 COG: HI1001; COG0706 Preprotein translocase subunit YidC; E=6e-32 PFAM: PF00595; PDZ domain (Also known as DHR or GLG; E=5.2e-06 PF02096; 60Kd inner membrane protein; E=2.8e-49; hypothetical protein 4407911 1790126 RB8240 Rhodopirellula baltica SH 1 hypothetical protein NP_868259.1 4405428 D 243090 CDS NP_868260.1 32475266 1793391 complement(4407852..4408184) 1 NC_005027.1 hypothetical protein 4408184 1793391 RB8243 Rhodopirellula baltica SH 1 hypothetical protein NP_868260.1 4407852 R 243090 CDS NP_868261.1 32475267 1795180 complement(4408205..4408444) 1 NC_005027.1 hypothetical protein 4408444 1795180 RB8245 Rhodopirellula baltica SH 1 hypothetical protein NP_868261.1 4408205 R 243090 CDS NP_868262.1 32475268 1796325 complement(4408441..4409241) 1 NC_005027.1 best DB hits: BLAST: embl:CAB59607.1; (AL132662) transmembrane protein; E=6e-08 pir:G83504; hypothetical protein PA1139 [imported] - Pseudomonas; E=6e-06 pir:T35659; probable transmembrane protein - Streptomyces coelicolor; E=2e-05 COG: PA1139; COG2340 Uncharacterized protein with SCP/PR1 domains; E=6e-07; transmembrane protein 4409241 1796325 RB8246 Rhodopirellula baltica SH 1 transmembrane protein NP_868262.1 4408441 R 243090 CDS NP_868263.1 32475269 1792896 complement(4409183..4409386) 1 NC_005027.1 hypothetical protein 4409386 1792896 RB8247 Rhodopirellula baltica SH 1 hypothetical protein NP_868263.1 4409183 R 243090 CDS NP_868264.1 32475270 1796158 4409395..4410156 1 NC_005027.1 PMID: 11571162 PMID: 89125597 best DB hits: BLAST: embl:CAA98652.1; (Z74134) ORF YDL086w [Saccharomyces cerevisiae]; E=2e-36 gb:AAC69477.1; (AF087482) dienelactone hydrolase [Pseudomonas; E=3e-09 ddbj:BAA74533.1; (AB019032) dienelactone hydrolase [Ralstonia; E=1e-08 COG: YDL086w; COG0412 Dienelactone hydrolase and related enzymes; E=2e-37 PFAM: PF01738; Dienelactone hydrolase; E=4.2e-05; carboxymethylenebutenolidase 4410156 1796158 RB8248 Rhodopirellula baltica SH 1 carboxymethylenebutenolidase NP_868264.1 4409395 D 243090 CDS NP_868265.1 32475271 1790492 4410353..4412131 1 NC_005027.1 PMID: 2129559 PMID: 1944398 PMID: 10562565 PMID: 10873442 best DB hits: BLAST: swissprot:O32038; SYD_BACSU ASPARTYL-TRNA SYNTHETASE; E=1e-165 ddbj:BAB04971.1; (AP001511) aspartyl-tRNA synthetase [Bacillus; E=1e-161 swissprot:O67589; SYD_AQUAE ASPARTYL-TRNA SYNTHETASE; E=1e-157 COG: BS_aspS; COG0173 Aspartyl-tRNA synthetase; E=1e-166 PFAM: PF01336; OB-fold nucleic acid binding dom; E=2.2e-11 PF00152; tRNA synthetases class II (D, K; E=8.2e-21 PF01409; tRNA synthetases class II (F); E=0.69; aspartyl-tRNA synthetase 4412131 aspS 1790492 aspS Rhodopirellula baltica SH 1 aspartyl-tRNA synthetase NP_868265.1 4410353 D 243090 CDS NP_868266.1 32475272 1793312 4412322..4414511 1 NC_005027.1 PMID: 9308174 best DB hits: BLAST: gb:AAB89635.1; (AE000991) cationic amino acid transporter (cat-1); E=3e-38 gb:AAG20879.1; (AE005155) cationic amino acid transporter; Cat2; E=1e-29 gb:AAG18789.1; (AE004983) cationic amino acid transporter; Cat1; E=6e-21 COG: AF1612_1; COG0531 Amino acid transporters; E=2e-32 PA5097; COG1113 Gamma-aminobutyrate and related permeases; E=4e-12 BS_ykbA; COG0531 Amino acid transporters; E=8e-12 PFAM: PF00324; Amino acid permease; E=2e-08; cationic amino acid transporter (cat-1) 4414511 1793312 RB8254 Rhodopirellula baltica SH 1 cationic amino acid transporter (cat-1) NP_868266.1 4412322 D 243090 CDS NP_868267.1 32475273 1793524 complement(4414523..4414690) 1 NC_005027.1 hypothetical protein 4414690 1793524 RB8257 Rhodopirellula baltica SH 1 hypothetical protein NP_868267.1 4414523 R 243090 CDS NP_868268.1 32475274 1796881 4414716..4415126 1 NC_005027.1 hypothetical protein 4415126 1796881 RB8258 Rhodopirellula baltica SH 1 hypothetical protein NP_868268.1 4414716 D 243090 CDS NP_868269.1 32475275 1796600 complement(4415068..4415394) 1 NC_005027.1 PMID: 20150255 best DB hits: BLAST: pir:H72072; conserved hypothetical protein CP0257 [imported] -; E=2e-10 pir:F81677; conserved hypothetical protein TC0667 [imported] -; E=4e-10 pir:B71520; hypothetical protein CT388 - Chlamydia trachomatis; E=6e-10 COG: CPn0497; COG1872 Uncharacterized ACR; E=2e-11 PFAM: PF02594; Uncharacterized ACR, YggU family COG; E=4.7e-22; hypothetical protein 4415394 1796600 RB8260 Rhodopirellula baltica SH 1 hypothetical protein NP_868269.1 4415068 R 243090 CDS NP_868270.1 32475276 1790663 complement(4415391..4419104) 1 NC_005027.1 PMID: 96062224 best DB hits: BLAST: pir:H64526; proline dehydrogenase (EC 1.5.99.8); E=0.0 pir:B71980; proline dehydrogenase (EC 1.5.99.8); E=0.0 pir:C81297; proline dehydrogenase (EC 1.5.99.8); E=1e-180 COG: jhp0048_2; COG1012 NAD-dependent aldehyde dehydrogenases; E=1e-123 Cj1503c_1; COG0506 Proline dehydrogenase; E=2e-56 sll1561_2; COG1012 NAD-dependent aldehyde dehydrogenases; E=1e-51 PFAM: PF01619; Proline dehydrogenase; E=2e-36 PF00171; Aldehyde dehydrogenase; E=0.0014; proline dehydrogenase 4419104 putA 1790663 putA Rhodopirellula baltica SH 1 proline dehydrogenase NP_868270.1 4415391 R 243090 CDS NP_868271.1 32475277 1793460 4419178..4419603 1 NC_005027.1 best DB hits: BLAST: swissprot:O67466; YE94_AQUAE HYPOTHETICAL PROTEIN AQ_1494 -----; E=3e-12 pir:B75463; conserved hypothetical protein - Deinococcus radiodurans; E=4e-10 pir:I39564; hypothetical protein 6 gbd-region [imported] -; E=1e-08 COG: aq_1494; COG0824 Predicted thioesterase; E=3e-13; thioesterase 4419603 1793460 RB8265 Rhodopirellula baltica SH 1 thioesterase NP_868271.1 4419178 D 243090 CDS NP_868272.1 32475278 1796122 4419639..4420688 1 NC_005027.1 best DB hits: BLAST: gb:AAK03329.1; (AE006164) unknown [Pasteurella multocida]; E=1e-04 swissprot:Q58707; YD11_METJA HYPOTHETICAL PROTEIN MJ1311 -----; E=2e-04 pir:S47803; hypothetical 33.7K protein (avtA-selB intergenic region); E=0.002 COG: MJ1311; COG1082 Predicted endonucleases; E=2e-05; hypothetical protein 4420688 1796122 RB8266 Rhodopirellula baltica SH 1 hypothetical protein NP_868272.1 4419639 D 243090 CDS NP_868273.1 32475279 1796491 4420685..4421662 1 NC_005027.1 best DB hits: BLAST: swissprot:P73460; YB44_SYNY3 HYPOTHETICAL 34.4 KDA PROTEIN SLL1144; E=2e-40 swissprot:Q9WZX6; Y872_THEMA HYPOTHETICAL PROTEIN TM0872 -----; E=7e-40 gb:AAK02218.1; (AE006048) unknown [Pasteurella multocida]; E=4e-38 COG: sll1144; COG0275 Predicted S-adenosylmethionine-dependent; E=2e-41 PFAM: PF01795; MraW methylase; E=2e-100; methyltransferase 4421662 1796491 RB8268 Rhodopirellula baltica SH 1 methyltransferase NP_868273.1 4420685 D 243090 CDS NP_868274.1 32475280 1791752 complement(4421746..4422867) 1 NC_005027.1 hypothetical protein 4422867 1791752 RB8271 Rhodopirellula baltica SH 1 hypothetical protein NP_868274.1 4421746 R 243090 CDS NP_868275.1 32475281 1796700 4422882..4424753 1 NC_005027.1 PMID: 8346225 PMID: 9097040 best DB hits: BLAST: swissprot:Q06067; ATOS_ECOLI SENSOR PROTEIN ATOS ----- pir:; E=2e-17 gb:AAD47419.1; AF100457_2 (AF100457) histidine kinase [Myxococcus; E=2e-16 ddbj:BAB04255.1; (AP001508) two-component sensor histidine kinase; E=3e-14 COG: atoS_3; COG0642 Sensory transduction histidine kinases; E=2e-18 Rv1827; COG1716 FHA-domain-containing proteins; E=1e-08 PA2882; COG0642 Sensory transduction histidine kinases; E=2e-08 PFAM: PF00498; FHA domain; E=3.2e-19 PF01590; GAF domain; E=4.8e-18 PF00512; His Kinase A (phosphoacceptor) doma; E=6.6e-07; sensor protein atoS 4424753 1796700 RB8274 Rhodopirellula baltica SH 1 sensor protein atoS NP_868275.1 4422882 D 243090 CDS NP_868276.1 32475282 1797174 complement(4424760..4424897) 1 NC_005027.1 hypothetical protein 4424897 1797174 RB8275 Rhodopirellula baltica SH 1 hypothetical protein NP_868276.1 4424760 R 243090 CDS NP_868277.1 32475283 1793254 complement(4424907..4425257) 1 NC_005027.1 hypothetical protein 4425257 1793254 RB8278 Rhodopirellula baltica SH 1 hypothetical protein NP_868277.1 4424907 R 243090 CDS NP_868278.1 32475284 1791717 4425128..4425343 1 NC_005027.1 hypothetical protein 4425343 1791717 RB8279 Rhodopirellula baltica SH 1 hypothetical protein NP_868278.1 4425128 D 243090 CDS NP_868279.1 32475285 1795032 4425318..4425707 1 NC_005027.1 PMID: 11759840; hypothetical protein 4425707 1795032 RB8280 Rhodopirellula baltica SH 1 hypothetical protein NP_868279.1 4425318 D 243090 CDS NP_868280.1 32475286 1797172 complement(4425696..4425938) 1 NC_005027.1 hypothetical protein 4425938 1797172 RB8281 Rhodopirellula baltica SH 1 hypothetical protein NP_868280.1 4425696 R 243090 CDS NP_868281.1 32475287 1791750 complement(4426169..4427014) 1 NC_005027.1 hypothetical protein 4427014 1791750 RB8282 Rhodopirellula baltica SH 1 hypothetical protein NP_868281.1 4426169 R 243090 CDS NP_868282.1 32475288 1792531 complement(4427175..4428167) 1 NC_005027.1 PMID: 98196666 best DB hits: BLAST: pir:F70440; conserved hypothetical protein aq_1630 - Aquifex; E=3e-18 pir:D71323; conserved hypothetical protein TP0436 - syphilis; E=3e-18 pir:F69999; conserved hypothetical protein ytqI - Bacillus subtilis; E=1e-16 COG: aq_1630; COG0618 Exopolyphosphatase-related proteins; E=3e-19 PFAM: PF01368; DHH family; E=2.4e-12 PF02272; DHHA1 domain; E=2.2e-06; a phopsphoesterase or an exonuclease 4428167 1792531 RB8284 Rhodopirellula baltica SH 1 a phopsphoesterase or an exonuclease NP_868282.1 4427175 R 243090 CDS NP_868283.1 32475289 1789926 complement(4428183..4429154) 1 NC_005027.1 PMID: 7772835 PMID: 3023344 best DB hits: BLAST: pir:T35984; probable riboflavin kinase (FAD synthetase) -; E=3e-46 pir:C83077; riboflavin kinaseFAD synthase PA4561 [imported] -; E=4e-42 pir:C82293; riboflavin kinaseFMN adenylyltransferase VC0681; E=2e-41 COG: PA4561; COG0196 FAD synthase; E=4e-43 PFAM: PF01687; Riboflavin kinase / FAD synthetase; E=3.3e-32; riboflavin kinase (FAD synthetase) 4429154 ribF 1789926 ribF Rhodopirellula baltica SH 1 riboflavin kinase (FAD synthetase) NP_868283.1 4428183 R 243090 CDS NP_868284.1 32475290 1790502 complement(4429273..4430187) 1 NC_005027.1 PMID: 20406833 best DB hits: BLAST: pir:H82489; conserved hypothetical protein VCA0191 [imported] -; E=2e-23 pir:G81111; conserved hypothetical protein NMB1197, NMB1159; E=4e-21 pir:C72317; conserved hypothetical protein - Thermotoga maritima; E=9e-21 COG: VCA0191_2; COG0063 Predicted sugar kinase; E=8e-24 PFAM: PF01256; Uncharacterized protein family UPF00; E=3.6e-40; sugar kinase 4430187 1790502 RB8287 Rhodopirellula baltica SH 1 sugar kinase NP_868284.1 4429273 R 243090 CDS NP_868285.1 32475291 1793764 4430350..4431591 1 NC_005027.1 PMID: 8170937 best DB hits: BLAST: pir:S76018; hypothetical protein - Synechocystis sp. (strain PCC; E=2e-61 swissprot:Q58752; YD57_METJA POTASSIUM CHANNEL PROTEIN; E=1e-36 swissprot:Q57604; Y13B_METJA POTASSIUM CHANNEL PROTEIN; E=2e-34 COG: sll0536; COG1226 Kef-type K+ transport systems, predicted; E=1e-62 MJ1357; COG1226 Kef-type K+ transport systems, predicted NAD-binding; E=1e-37 MJ0138.1; COG1226 Kef-type K+ transport systems, predicted; E=2e-35 PFAM: PF00520; Ion transport protein; E=0.45 PF02254; KTN NAD-binding domain; E=5.2e-39 PF02080; Potassium channel; E=2.2e-09; potassium channel 4431591 1793764 RB8290 Rhodopirellula baltica SH 1 potassium channel NP_868285.1 4430350 D 243090 CDS NP_868286.1 32475292 1793455 complement(4431605..4432453) 1 NC_005027.1 PMID: 98049343 PMID: 8809759 best DB hits: BLAST: gb:AAB89969.1; (AE001016) conserved hypothetical protein; E=4e-29 pir:S76797; hypothetical protein - Synechocystis sp. (strain PCC; E=7e-28 gb:AAD29318.1; AF117208_1 (AF117208) circadian phase modifier; E=2e-24 COG: AF1275; COG1691 NCAIR mutase (PurE)-related proteins; E=4e-30; phosphoribosylcarboxyaminoimidazole mutase (purE) 4432453 purE 1793455 purE Rhodopirellula baltica SH 1 phosphoribosylcarboxyaminoimidazole mutase (purE) NP_868286.1 4431605 R 243090 CDS NP_868287.1 32475293 1795790 4432457..4433791 1 NC_005027.1 PMID: 20158877 PMID: 90046714 PMID: 3174461 best DB hits: BLAST: pir:H72210; argininosuccinate synthase - Thermotoga maritima (strain; E=2e-97 pir:D75490; arginosuccinate synthase - Deinococcus radiodurans; E=3e-96 pir:C83204; argininosuccinate synthase PA3525 [imported] -; E=2e-87 COG: TM1780; COG0137 Argininosuccinate synthase; E=2e-98 PFAM: PF00764; Arginosuccinate synthase; E=2e-190; argininosuccinate synthase 4433791 argG 1795790 argG Rhodopirellula baltica SH 1 argininosuccinate synthase NP_868287.1 4432457 D 243090 CDS NP_868288.1 32475294 1792512 complement(4433907..4434830) 1 NC_005027.1 hypothetical protein 4434830 1792512 RB8295 Rhodopirellula baltica SH 1 hypothetical protein NP_868288.1 4433907 R 243090 CDS NP_868289.1 32475295 1797179 4434814..4435359 1 NC_005027.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 4435359 dtd 1797179 dtd Rhodopirellula baltica SH 1 D-tyrosyl-tRNA(Tyr) deacylase NP_868289.1 4434814 D 243090 CDS NP_868290.1 32475296 1796359 complement(4435384..4436412) 1 NC_005027.1 hypothetical protein 4436412 1796359 RB8301 Rhodopirellula baltica SH 1 hypothetical protein NP_868290.1 4435384 R 243090 CDS NP_868291.1 32475297 1791081 4436602..4437399 1 NC_005027.1 PMID: 2542219 best DB hits: PFAM: PF02674; Colicin V production protein; E=8.4e-14; colicin V biosynthesis protein 4437399 1791081 RB8306 Rhodopirellula baltica SH 1 colicin V biosynthesis protein NP_868291.1 4436602 D 243090 CDS NP_868292.1 32475298 1796160 4437354..4437554 1 NC_005027.1 hypothetical protein 4437554 1796160 RB8309 Rhodopirellula baltica SH 1 hypothetical protein NP_868292.1 4437354 D 243090 CDS NP_868293.1 32475299 1794220 complement(4437695..4438654) 1 NC_005027.1 best DB hits: BLAST: gb:AAK02376.1; (AE006064) AccA [Pasteurella multocida]; E=4e-72 swissprot:P43872; ACCA_HAEIN ACETYL-COENZYME A CARBOXYLASE; E=6e-72 ddbj:BAA77860.1; (D83536) Acetyl-CoA carboxylase (EC 6.4.1.2),; E=1e-68 COG: HI0406; COG0825 Acetyl-CoA carboxylase alpha subunit; E=5e-73; acetylCoA-carboxylase 4438654 accA 1794220 accA Rhodopirellula baltica SH 1 acetylCoA-carboxylase NP_868293.1 4437695 R 243090 CDS NP_868294.1 32475300 1791335 complement(4438658..4439752) 1 NC_005027.1 PMID: 7774814 best DB hits: BLAST: pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=2e-27 pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=1e-26 pir:T36501; probable serinethreonine protein kinase - Streptomyces; E=2e-26 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=1e-28 PFAM: PF00069; Protein kinase domain; E=3e-39; protein kinase yloP 4439752 1791335 RB8311 Rhodopirellula baltica SH 1 protein kinase yloP NP_868294.1 4438658 R 243090 CDS NP_868295.1 32475301 1796226 complement(4439844..4441088) 1 NC_005027.1 PMID: 10531250 best DB hits: BLAST: gb:AAD50490.1; AF172324_8 (AF172324) WbnE [Escherichia coli]; E=7e-21 pir:C70036; capsular polysaccharide biosynthesis homolog yveN -; E=2e-19 pir:T35514; probable glycosyl transferase - Streptomyces coelicolor; E=2e-17 COG: BS_yveN; COG0438 Predicted glycosyltransferases; E=2e-20 PFAM: PF00534; Glycosyl transferases group 1; E=9.5e-43; glycosyl transferase (WbnE) 4441088 1796226 RB8313 Rhodopirellula baltica SH 1 glycosyl transferase (WbnE) NP_868295.1 4439844 R 243090 CDS NP_868296.1 32475302 1796695 complement(4441097..4441915) 1 NC_005027.1 PMID: 2507166 PMID: 94259284 best DB hits: BLAST: pir:S29615; whiG protein - Streptoverticillium griseocarneum -----; E=5e-44 gb:AAB41960.1; (U58281) sporulation sigma factor [Streptomyces; E=9e-44 prf:2013252A; RNA polymerase:SUBUNIT=sigma factor [Streptomyces; E=1e-43 COG: TP0709; COG1191 DNA-directed RNA polymerase specialized sigma; E=8e-41 fliA; COG1191 DNA-directed RNA polymerase specialized sigma subunit; E=2e-38 BS_sigD; COG1191 DNA-directed RNA polymerase specialized sigma; E=7e-34 PFAM: PF01399; PCI domain; E=0.026 PF00140; Sigma-70 factor; E=1.3e-59; RNA polymerase sigma factor whiG 4441915 whiG 1796695 whiG Rhodopirellula baltica SH 1 RNA polymerase sigma factor whiG NP_868296.1 4441097 R 243090 CDS NP_868297.1 32475303 1791106 complement(4442037..4442318) 1 NC_005027.1 hypothetical protein 4442318 1791106 RB8318 Rhodopirellula baltica SH 1 hypothetical protein NP_868297.1 4442037 R 243090 CDS NP_868298.1 32475304 1794937 complement(4442308..4442421) 1 NC_005027.1 hypothetical protein 4442421 1794937 RB8319 Rhodopirellula baltica SH 1 hypothetical protein NP_868298.1 4442308 R 243090 CDS NP_868299.1 32475305 1792132 complement(4442485..4443879) 1 NC_005027.1 PMID: 1447978 best DB hits: BLAST: pir:B72319; flagellar biosynthesis protein FlhF - Thermotoga; E=9e-32 ddbj:BAB06156.1; (AP001515) flagella-associated protein [Bacillus; E=3e-22 swissprot:Q01960; FLHF_BACSU FLAGELLAR BIOSYNTHESIS PROTEIN FLHF; E=2e-21 COG: TM0907; COG1419 Flagellar GTP-binding protein; E=8e-33 AF0622; COG0541 Signal recognition particle GTPase; E=3e-09 PFAM: PF00005; ABC transporter; E=0.018 PF00931; NB-ARC domain; E=0.2 PF00004; ATPase associated with va; E=0.13; flagellar biosynthesis protein FlhF 4443879 flhF 1792132 flhF Rhodopirellula baltica SH 1 flagellar biosynthesis protein FlhF NP_868299.1 4442485 R 243090 CDS NP_868300.1 32475306 1794984 complement(4443876..4445939) 1 NC_005027.1 PMID: 8097015 best DB hits: BLAST: ddbj:BAB06157.1; (AP001515) flagella-associated protein [Bacillus; E=1e-119 pir:C72319; flagellar biosynthesis protein FlhA - Thermotoga; E=1e-115 swissprot:P35620; FLHA_BACSU FLAGELLAR BIOSYNTHESIS PROTEIN FLHA; E=1e-114 COG: BH2438; COG1298 Flagellar biosynthesis/type III secretory pathway; E=1e-120 PFAM: PF00771; FHIPEP family; E=1.6e-261; flagella-associated protein 4445939 flhA 1794984 flhA Rhodopirellula baltica SH 1 flagella-associated protein NP_868300.1 4443876 R 243090 CDS NP_868301.1 32475307 1796208 complement(4445997..4446113) 1 NC_005027.1 hypothetical protein 4446113 1796208 RB8324 Rhodopirellula baltica SH 1 hypothetical protein NP_868301.1 4445997 R 243090 CDS NP_868302.1 32475308 1796257 complement(4446139..4447029) 1 NC_005027.1 hypothetical protein 4447029 1796257 RB8325 Rhodopirellula baltica SH 1 hypothetical protein NP_868302.1 4446139 R 243090 CDS NP_868303.1 32475309 1793502 complement(4447147..4449489) 1 NC_005027.1 PMID: 1835671 best DB hits: BLAST: swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=2e-35 pir:T36501; probable serinethreonine protein kinase - Streptomyces; E=2e-34 embl:CAB94054.1; (AL358672) serinethreonine-protein; E=4e-34 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=2e-33 PFAM: PF00069; Protein kinase domain; E=3e-52 PF00191; Annexin; E=0.78; serine/threonine-protein kinase pknB 4449489 pknB 1793502 pknB Rhodopirellula baltica SH 1 serine/threonine-protein kinase pknB NP_868303.1 4447147 R 243090 CDS NP_868304.1 32475310 1795196 complement(4449338..4449607) 1 NC_005027.1 hypothetical protein 4449607 1795196 RB8327 Rhodopirellula baltica SH 1 hypothetical protein NP_868304.1 4449338 R 243090 CDS NP_868305.1 32475311 1790885 4449636..4450601 1 NC_005027.1 PMID: 97158661 best DB hits: BLAST: gb:AAB68787.1; (U97022) orf; similar to the Staphylococcus aureus; E=6e-35 gb:AAK06020.1; AE006422_9 (AE006422) HYPOTHETICAL PROTEIN; E=2e-29 ddbj:BAB04894.1; (AP001511) CMP-binding protein [Bacillus; E=1e-28 PFAM: PF01336; OB-fold nucleic acid binding domain; E=1.4e-05 PF01966; HD domain; E=1.1e-10; CMP-binding protein 4450601 1790885 RB8328 Rhodopirellula baltica SH 1 CMP-binding protein NP_868305.1 4449636 D 243090 CDS NP_868306.1 32475312 1793235 4450583..4451335 1 NC_005027.1 best DB hits: BLAST: pir:E83522; conserved hypothetical protein PA0976 [imported] -; E=6e-63 embl:CAB50783.1; (X74218) hypothetical protein [Pseudomonas; E=3e-62 pir:B82628; transcriptional regulator XF1858 [imported] - Xylella; E=1e-60 COG: PA0976; COG0603 Predicted ATPase (PP-loop superfamily), confers; E=6e-64 XF0999; COG0137 Argininosuccinate synthase; E=3e-04 PFAM: PF02568; Thiamine biosynthesis protein; E=0.087 PF00733; Asparagine synthase; E=0.26 PF00764; Arginosuccinate synthase; E=0.00022; transcriptional regulator 4451335 1793235 RB8329 Rhodopirellula baltica SH 1 transcriptional regulator NP_868306.1 4450583 D 243090 CDS NP_868307.1 32475313 1793110 complement(4451457..4451813) 1 NC_005027.1 hypothetical protein 4451813 1793110 RB8332 Rhodopirellula baltica SH 1 hypothetical protein NP_868307.1 4451457 R 243090 CDS NP_868308.1 32475314 1791586 4451489..4451839 1 NC_005027.1 best DB hits: BLAST: embl:CAB77251.1; (AJ249487) accumulation-associated protein; E=0.75; hypothetical protein 4451839 1791586 RB8333 Rhodopirellula baltica SH 1 hypothetical protein NP_868308.1 4451489 D 243090 CDS NP_868309.1 32475315 1791746 4451919..4452278 1 NC_005027.1 hypothetical protein 4452278 1791746 RB8335 Rhodopirellula baltica SH 1 hypothetical protein NP_868309.1 4451919 D 243090 CDS NP_868310.1 32475316 1792918 complement(4452448..4454547) 1 NC_005027.1 hypothetical protein 4454547 1792918 RB8337 Rhodopirellula baltica SH 1 hypothetical protein NP_868310.1 4452448 R 243090 CDS NP_868311.1 32475317 1796488 complement(4454565..4454696) 1 NC_005027.1 hypothetical protein 4454696 1796488 RB8342 Rhodopirellula baltica SH 1 hypothetical protein NP_868311.1 4454565 R 243090 CDS NP_868312.1 32475318 1796353 4454677..4456134 1 NC_005027.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 4456134 purB 1796353 purB Rhodopirellula baltica SH 1 adenylosuccinate lyase NP_868312.1 4454677 D 243090 CDS NP_868313.1 32475319 1790337 4456118..4456243 1 NC_005027.1 hypothetical protein 4456243 1790337 RB8344 Rhodopirellula baltica SH 1 hypothetical protein NP_868313.1 4456118 D 243090 CDS NP_868314.1 32475320 1796633 complement(4456240..4457583) 1 NC_005027.1 best DB hits: BLAST: gb:AAD19720.1; (AF124349) unknown [Zymomonas mobilis]; E=0.54 PFAM: PF00076; RNA recognition motif. (a.k.a. RRM,; E=0.54; hypothetical protein 4457583 1796633 RB8345 Rhodopirellula baltica SH 1 hypothetical protein NP_868314.1 4456240 R 243090 CDS NP_868315.1 32475321 1796703 complement(4457580..4457780) 1 NC_005027.1 hypothetical protein 4457780 1796703 RB8348 Rhodopirellula baltica SH 1 hypothetical protein NP_868315.1 4457580 R 243090 CDS NP_868316.1 32475322 1796577 complement(4457938..4459383) 1 NC_005027.1 hypothetical protein 4459383 1796577 RB8350 Rhodopirellula baltica SH 1 hypothetical protein NP_868316.1 4457938 R 243090 CDS NP_868317.1 32475323 1795867 4459374..4459622 1 NC_005027.1 hypothetical protein 4459622 1795867 RB8353 Rhodopirellula baltica SH 1 hypothetical protein NP_868317.1 4459374 D 243090 CDS NP_868318.1 32475324 1792968 4459577..4459735 1 NC_005027.1 hypothetical protein 4459735 1792968 RB8355 Rhodopirellula baltica SH 1 hypothetical protein NP_868318.1 4459577 D 243090 CDS NP_868319.1 32475325 1790351 4459802..4460011 1 NC_005027.1 hypothetical protein 4460011 1790351 RB8356 Rhodopirellula baltica SH 1 hypothetical protein NP_868319.1 4459802 D 243090 CDS NP_868320.1 32475326 1793900 complement(4460004..4460174) 1 NC_005027.1 hypothetical protein 4460174 1793900 RB8357 Rhodopirellula baltica SH 1 hypothetical protein NP_868320.1 4460004 R 243090 CDS NP_868321.1 32475327 1795213 4460178..4460453 1 NC_005027.1 PMID: 9342321 best DB hits: BLAST: ddbj:BAB04384.1; (AP001509) glutamyl-tRNA (Gln); E=2e-13 swissprot:O67904; GATC_AQUAE GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE; E=6e-11 swissprot:O06492; GATC_BACSU GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE; E=7e-10 COG: BH0665; COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit; E=2e-14 BS_yerL; COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C; E=8e-11 PA4482; COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit; E=2e-08 PFAM: PF02686; Glu-tRNAGln amidotransferase C su; E=3e-15; glutamyl-tRNA (Gln) amidotransferase subunit C 4460453 gatC 1795213 gatC Rhodopirellula baltica SH 1 glutamyl-tRNA (Gln) amidotransferase subunit C NP_868321.1 4460178 D 243090 CDS NP_868322.1 32475328 1795112 4460580..4460726 1 NC_005027.1 hypothetical protein 4460726 1795112 RB8361 Rhodopirellula baltica SH 1 hypothetical protein NP_868322.1 4460580 D 243090 CDS NP_868323.1 32475329 1796410 complement(4460687..4462144) 1 NC_005027.1 PMID: 11298281 best DB hits: BLAST: gb:AAF81068.1; AF223364_3 (AF223364) protein phosphatase 1; E=9e-32 pir:E71538; hypothetical protein CT259 - Chlamydia trachomatis; E=4e-28 pir:H75265; conserved hypothetical protein - Deinococcus radiodurans; E=5e-28 COG: CT259; COG0631 Protein serine/threonine phosphatases; E=4e-29 PFAM: PF00481; Protein phosphatase 2C; E=4.9e-09; protein phosphatase 1 4462144 Pph1 1796410 Pph1 Rhodopirellula baltica SH 1 protein phosphatase 1 NP_868323.1 4460687 R 243090 CDS NP_868324.1 32475330 1792976 complement(4462387..4463592) 1 NC_005027.1 PMID: 8978088 best DB hits: BLAST: pir:B82211; peptidase, M20A family VC1343 [imported] - Vibrio; E=1e-34 swissprot:P54542; YQJE_BACSU HYPOTHETICAL 39.7 KD PROTEIN IN; E=2e-32 ddbj:BAB05188.1; (AP001512) BH1469~unknown conserved protein; E=7e-32 COG: VC1343; COG2195 Di- and tripeptidases; E=1e-35 PA5390; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate; E=5e-07 HI1348; COG2195 Di- and tripeptidases; E=5e-06 PFAM: PF01546; Peptidase M20/M25/M40; E=6.8e-20; M20A family peptidase 4463592 pepT 1792976 pepT Rhodopirellula baltica SH 1 M20A family peptidase NP_868324.1 4462387 R 243090 CDS NP_868325.1 32475331 1791574 complement(4463631..4463903) 1 NC_005027.1 signal peptide 4463903 1791574 RB8365 Rhodopirellula baltica SH 1 signal peptide NP_868325.1 4463631 R 243090 CDS NP_868326.1 32475332 1792178 4463905..4464057 1 NC_005027.1 hypothetical protein 4464057 1792178 RB8367 Rhodopirellula baltica SH 1 hypothetical protein NP_868326.1 4463905 D 243090 CDS NP_868327.1 32475333 1794927 complement(4464030..4465001) 1 NC_005027.1 best DB hits: BLAST: pir:F82221; conserved hypothetical protein VC1259 [imported] -; E=7e-86 pir:D83539; conserved hypothetical protein PA0858 [imported] -; E=4e-81 pir:G75436; conserved hypothetical protein - Deinococcus radiodurans; E=2e-67 COG: VC1259; COG1054 Uncharacterized enzyme related to sulfurtransferases; E=6e-87 sll0765; COG1054 Uncharacterized enzyme related to; E=5e-67 RP125; COG1054 Uncharacterized enzyme related to sulfurtransferases; E=2e-49 PFAM: PF00581; Rhodanese-like domain; E=1.5e-17; hypothetical protein 4465001 1794927 RB8368 Rhodopirellula baltica SH 1 hypothetical protein NP_868327.1 4464030 R 243090 CDS NP_868328.1 32475334 1795783 complement(4465020..4467089) 1 NC_005027.1 best DB hits: PFAM: PF00602; Influenza RNA-dependent RNA poly; E=0.35; hypothetical protein 4467089 1795783 RB8370 Rhodopirellula baltica SH 1 hypothetical protein NP_868328.1 4465020 R 243090 CDS NP_868329.1 32475335 1794086 4467164..4468927 1 NC_005027.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 4468927 guaA 1794086 guaA Rhodopirellula baltica SH 1 GMP synthase NP_868329.1 4467164 D 243090 CDS NP_868330.1 32475336 1790461 4469120..4470799 1 NC_005027.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein 4470799 1790461 RB8375 Rhodopirellula baltica SH 1 ABC transporter ATP-binding protein NP_868330.1 4469120 D 243090 CDS NP_868331.1 32475337 1794023 4470886..4471233 1 NC_005027.1 hypothetical protein 4471233 1794023 RB8376 Rhodopirellula baltica SH 1 hypothetical protein NP_868331.1 4470886 D 243090 CDS NP_868332.1 32475338 1796549 4471241..4475557 1 NC_005027.1 hypothetical protein 4475557 1796549 RB8378 Rhodopirellula baltica SH 1 hypothetical protein NP_868332.1 4471241 D 243090 CDS NP_868333.1 32475339 1796026 4475559..4475819 1 NC_005027.1 hypothetical protein 4475819 1796026 RB8381 Rhodopirellula baltica SH 1 hypothetical protein NP_868333.1 4475559 D 243090 CDS NP_868334.1 32475340 1794815 4475978..4478470 1 NC_005027.1 PMID: 7916624 PMID: 2424788 best DB hits: BLAST: pir:S77252; phosphorylase (EC 2.4.1.1) 2 - Synechocystis sp. (strain; E=0.0 swissprot:P73511; PHSG_SYNY3 GLYCOGEN PHOSPHORYLASE ----- pir:; E=0.0 gb:AAD30476.1; AF124787_1 (AF124787) muscle glycogen phosphorylase; E=0.0 COG: slr1367; COG0058 Glucan phosphorylase; E=0.0 PFAM: PF00343; Carbohydrate phosphorylase; E=0; phosphorylase 2 4478470 glgP 1794815 glgP Rhodopirellula baltica SH 1 phosphorylase 2 NP_868334.1 4475978 D 243090 CDS NP_868335.1 32475341 1794287 4478623..4479924 1 NC_005027.1 best DB hits: BLAST: gb:AAD45539.1; U70376_1 (U70376) InsA [Streptomyces netropsis]; E=5e-33 gb:AAG60893.1; AF322013_12 (AF322013) ID460 [Bradyrhizobium; E=8e-33 ddbj:BAA19966.1; (D63923) transposase [Acetobacter pasteurianus]; E=1e-26; InsA (transposase) 4479924 insA 1794287 insA Rhodopirellula baltica SH 1 InsA (transposase) NP_868335.1 4478623 D 243090 CDS NP_868336.1 32475342 1795321 4479935..4480087 1 NC_005027.1 hypothetical protein 4480087 1795321 RB8385 Rhodopirellula baltica SH 1 hypothetical protein NP_868336.1 4479935 D 243090 CDS NP_868337.1 32475343 1795364 complement(4480229..4480744) 1 NC_005027.1 hypothetical protein 4480744 1795364 RB8387 Rhodopirellula baltica SH 1 hypothetical protein NP_868337.1 4480229 R 243090 CDS NP_868338.1 32475344 1796499 complement(4480960..4481880) 1 NC_005027.1 PMID: 11481431; hypothetical protein 4481880 1796499 RB8388 Rhodopirellula baltica SH 1 hypothetical protein NP_868338.1 4480960 R 243090 CDS NP_868339.1 32475345 1791796 complement(4481915..4484734) 1 NC_005027.1 hypothetical protein 4484734 1791796 RB8389 Rhodopirellula baltica SH 1 hypothetical protein NP_868339.1 4481915 R 243090 CDS NP_868340.1 32475346 1793302 complement(4484815..4485939) 1 NC_005027.1 hypothetical protein 4485939 1793302 RB8394 Rhodopirellula baltica SH 1 hypothetical protein NP_868340.1 4484815 R 243090 CDS NP_868341.1 32475347 1796372 complement(4486129..4487310) 1 NC_005027.1 PMID: 8472961 PMID: 7836307 PMID: 10452953 PMID: 1901561 best DB hits: BLAST: embl:CAB52498.1; (AJ131519) DEAH-family helicase; E=1e-11 swissprot:P24125; V51K_BPL79 51.5 KD PROTEIN ----- pir: JU0445; E=5e-10 embl:CAB63670.1; (AJ251789) hypothetical protein [Lactobacillus; E=1e-08 COG: VC0812_2; COG1061 DNA or RNA helicases of superfamily II; E=1e-08 DR1624; COG0513 Superfamily II DNA and RNA helicases; E=5e-04 PFAM: PF00270; DEAD/DEAH box helicase; E=0.024 PF00271; Helicase conserved C-terminal doma; E=5.5e-07; DEAH-family helicase 4487310 deaD 1796372 deaD Rhodopirellula baltica SH 1 DEAH-family helicase NP_868341.1 4486129 R 243090 CDS NP_868342.1 32475348 1796164 complement(4487470..4489596) 1 NC_005027.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 4489596 uvrB 1796164 uvrB Rhodopirellula baltica SH 1 excinuclease ABC subunit B NP_868342.1 4487470 R 243090 CDS NP_868343.1 32475349 1792189 4489679..4490314 1 NC_005027.1 catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 4490314 tdk 1792189 tdk Rhodopirellula baltica SH 1 thymidine kinase NP_868343.1 4489679 D 243090 CDS NP_868344.1 32475350 1797213 4490393..4492687 1 NC_005027.1 PMID: 9603904 best DB hits: BLAST: ddbj:BAB07272.1; (AP001519) ribonuclease R [Bacillus halodurans]; E=6e-88 swissprot:O32231; RNR_BACSU RIBONUCLEASE R (RNASE R) (VACB PROTEIN; E=8e-84 gb:AAK05040.1; AE006328_8 (AE006328) ribonuclease [Lactococcus; E=3e-76 COG: BH3553_1; COG0557 Exoribonucleases; E=1e-76 PFAM: PF00773; RNB-like protein; E=2e-87 PF00575; S1 RNA binding domain; E=3.2e-08; ribonuclease R 4492687 rnr 1797213 rnr Rhodopirellula baltica SH 1 ribonuclease R NP_868344.1 4490393 D 243090 CDS NP_868345.1 32475351 1794882 4492899..4493618 1 NC_005027.1 Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 4493618 cobT 1794882 cobT Rhodopirellula baltica SH 1 NAD-dependent deacetylase NP_868345.1 4492899 D 243090 CDS NP_868346.1 32475352 1797147 complement(4493600..4494673) 1 NC_005027.1 hypothetical protein 4494673 1797147 RB8406 Rhodopirellula baltica SH 1 hypothetical protein NP_868346.1 4493600 R 243090 CDS NP_868347.1 32475353 1795605 complement(4494700..4495545) 1 NC_005027.1 best DB hits: BLAST: pir:T37061; probable secreted protein - Streptomyces coelicolor; E=2e-27 pir:T35483; hypothetical protein SC6C5.12c SC6C5.12c - Streptomyces; E=2e-16 pir:T35506; hypothetical protein SC6E10.19c - Streptomyces; E=9e-11 COG: DR2293; COG3021 Uncharacterized BCR; E=7e-04 PFAM: PF01260; AP endonuclease 1; E=0.88; hypothetical protein 4495545 1795605 RB8407 Rhodopirellula baltica SH 1 hypothetical protein NP_868347.1 4494700 R 243090 CDS NP_868348.1 32475354 1790101 4495547..4495840 1 NC_005027.1 hypothetical protein 4495840 1790101 RB8409 Rhodopirellula baltica SH 1 hypothetical protein NP_868348.1 4495547 D 243090 CDS NP_868349.1 32475355 1789970 4495746..4496063 1 NC_005027.1 best DB hits: BLAST: embl:CAB57873.1; (AJ132579) coat protein readthrough [Oat golden; E=0.10 embl:CAB57874.1; (AJ132579) coat protein [Oat golden stripe; E=0.10; hypothetical protein 4496063 1789970 RB8410 Rhodopirellula baltica SH 1 hypothetical protein NP_868349.1 4495746 D 243090 CDS NP_868350.1 32475356 1795153 4496092..4497180 1 NC_005027.1 best DB hits: BLAST: pir:H83475; probable transcriptional regulator PA1359 [imported] -; E=0.067 embl:CAA64677.1; (X95394) aldehyde dehydrogenase-like protein; E=0.52 COG: PA1359; COG1396 Predicted transcriptional regulators; E=0.006 PFAM: PF01381; Helix-turn-helix; E=7.3e-11; transcriptional regulator 4497180 1795153 RB8411 Rhodopirellula baltica SH 1 transcriptional regulator NP_868350.1 4496092 D 243090 CDS NP_868351.1 32475357 1796291 complement(4497128..4498204) 1 NC_005027.1 hypothetical protein 4498204 1796291 RB8414 Rhodopirellula baltica SH 1 hypothetical protein NP_868351.1 4497128 R 243090 CDS NP_868352.1 32475358 1794322 complement(4498132..4498758) 1 NC_005027.1 best DB hits: PFAM: PF00583; Acetyltransferase (GNAT) family; E=0.72; hypothetical protein 4498758 1794322 RB8415 Rhodopirellula baltica SH 1 hypothetical protein NP_868352.1 4498132 R 243090 CDS NP_868353.1 32475359 1790847 4498883..4498999 1 NC_005027.1 hypothetical protein 4498999 1790847 RB8417 Rhodopirellula baltica SH 1 hypothetical protein NP_868353.1 4498883 D 243090 CDS NP_868354.1 32475360 1792559 complement(4498986..4501421) 1 NC_005027.1 PMID: 9086272 best DB hits: BLAST: swissprot:P94461; PRIA_BACSU PRIMOSOMAL PROTEIN N' (REPLICATION; E=1e-130 embl:CAA71348.1; (Y10304) priA [Bacillus subtilis]; E=1e-123 swissprot:P74397; PRIA_SYNY3 PRIMOSOMAL PROTEIN N' (REPLICATION; E=1e-112 COG: BS_priA; COG1198 Primosomal protein N' (replication factor Y) -; E=1e-131 PFAM: PF00005; ABC transporter; E=0.66 PF01443; Viral (Superfamily 1) RNA hel; E=0.33 PF00271; Helicase conserved C-terminal; E=7.8e-09; primosomal protein N 4501421 priA 1792559 priA Rhodopirellula baltica SH 1 primosomal protein N NP_868354.1 4498986 R 243090 CDS NP_868355.1 32475361 1794407 4501382..4501843 1 NC_005027.1 hypothetical protein 4501843 1794407 RB8420 Rhodopirellula baltica SH 1 hypothetical protein NP_868355.1 4501382 D 243090 CDS NP_868356.1 32475362 1791235 4501840..4502310 1 NC_005027.1 signal peptide 4502310 1791235 RB8421 Rhodopirellula baltica SH 1 signal peptide NP_868356.1 4501840 D 243090 CDS NP_868357.1 32475363 1794264 4502270..4502428 1 NC_005027.1 hypothetical protein 4502428 1794264 RB8422 Rhodopirellula baltica SH 1 hypothetical protein NP_868357.1 4502270 D 243090 CDS NP_868358.1 32475364 1791047 complement(4502421..4504376) 1 NC_005027.1 PMID: 9634230 best DB hits: BLAST: pir:F70837; probable sulfatase (EC 3.1.6.-) atsG - Mycobacterium; E=1e-40 gb:AAF55607.1; (AE003724) CG14291 gene product [Drosophila; E=1e-20 gb:AAF29467.1; (AF156255) N-sulfoglucosamine sulfohydrolase [Mus; E=3e-20 COG: Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=1e-41 BH1718; COG1413 Phycocyanin alpha-subunit phycocyanobilin lyase and; E=0.010 PFAM: PF00884; Sulfatase; E=5.2e-22; sulfatase atsG 4504376 atsG 1791047 atsG Rhodopirellula baltica SH 1 sulfatase atsG NP_868358.1 4502421 R 243090 CDS NP_868359.1 32475365 1794417 complement(4504479..4505753) 1 NC_005027.1 PMID: 10844693 PMID: 10712688 best DB hits: BLAST: pir:T44945; hypothetical protein 6 [imported] - Natronobacterium; E=1e-48 swissprot:Q9RPF3; MNT1_PSEAE MANGANESE TRANSPORT PROTEIN MNTH1; E=1e-18 pir:B83105; probable transport protein PA4334 [imported] -; E=1e-18 COG: PA4334; COG1914 Mn2+ and Fe2+ transporters of the NRAMP family; E=1e-19 PFAM: PF01566; Natural resistance-associated macrop; E=0.00026; manganese transport protein mntH1 4505753 mntH 1794417 mntH Rhodopirellula baltica SH 1 manganese transport protein mntH1 NP_868359.1 4504479 R 243090 CDS NP_868360.1 32475366 1792052 4505767..4506624 1 NC_005027.1 best DB hits: BLAST: pir:F70844; probable fusion protein - Mycobacterium tuberculosis; E=1e-07 embl:CAC04235.1; (AL391515) conserved hypothetical protein; E=2e-04 pir:E83611; conserved hypothetical protein PA0269 [imported] -; E=0.020 COG: Rv3327_2; COG2128 Uncharacterized ACR; E=1e-08; fusion protein 4506624 1792052 RB8432 Rhodopirellula baltica SH 1 fusion protein NP_868360.1 4505767 D 243090 CDS NP_868361.1 32475367 1796818 4506660..4506869 1 NC_005027.1 hypothetical protein 4506869 1796818 RB8434 Rhodopirellula baltica SH 1 hypothetical protein NP_868361.1 4506660 D 243090 CDS NP_868362.1 32475368 1793066 4506842..4509907 1 NC_005027.1 PMID: 98027367 best DB hits: BLAST: embl:CAA04438.1; (AJ000978) cistrans isomerase [Pseudomonas; E=0.030 gb:AAD41252.1; AF110738_2 (AF110738) Cti [Pseudomonas putida]; E=0.030 gb:AAD41255.1; AF110739_2 (AF110739) Cti [Pseudomonas putida]; E=0.030; cis/trans isomerase 4509907 cti 1793066 cti Rhodopirellula baltica SH 1 cis/trans isomerase NP_868362.1 4506842 D 243090 CDS NP_868363.1 32475369 1792214 4509914..4511311 1 NC_005027.1 best DB hits: BLAST: gb:AAK03766.1; (AE006204) unknown [Pasteurella multocida]; E=0.72; hypothetical protein 4511311 1792214 RB8440 Rhodopirellula baltica SH 1 hypothetical protein NP_868363.1 4509914 D 243090 CDS NP_868364.1 32475370 1795305 complement(4511315..4514038) 1 NC_005027.1 PMID: 87307953 best DB hits: BLAST: pir:I39942; penicillinase antirepressor penJ - Bacillus; E=1e-07 swissprot:P12287; BLAR_BACLI REGULATORY PROTEIN BLAR1 -----; E=2e-07; penicillinase antirepressor penJ 4514038 1795305 RB8441 Rhodopirellula baltica SH 1 penicillinase antirepressor penJ NP_868364.1 4511315 R 243090 CDS NP_868365.1 32475371 1797070 complement(4514050..4514475) 1 NC_005027.1 best DB hits: BLAST: pir:S74550; hypothetical protein slr0240 - Synechocystis sp. (strain; E=2e-07 swissprot:Q47839; COPY_ENTHR COPAB ATPASES METAL-FIST TYPE; E=0.047 swissprot:O07127; YPTY_LACSK HYPOTHETICAL 16.5 KD PROTEIN IN PTSI; E=0.13; hypothetical protein 4514475 1797070 RB8445 Rhodopirellula baltica SH 1 hypothetical protein NP_868365.1 4514050 R 243090 CDS NP_868366.1 32475372 1790616 4514588..4514986 1 NC_005027.1 hypothetical protein 4514986 1790616 RB8448 Rhodopirellula baltica SH 1 hypothetical protein NP_868366.1 4514588 D 243090 CDS NP_868367.1 32475373 1795567 4514838..4516724 1 NC_005027.1 best DB hits: BLAST: pir:S75290; hypothetical protein sll1289 - Synechocystis sp. (strain; E=0.007 pir:G70687; hypothetical protein Rv1732c - Mycobacterium; E=0.037 ddbj:BAB05296.1; (AP001512) cytochrome c biogenesis (thioredoxin); E=0.53 COG: sll1289; COG0526 Thiol-disulfide isomerase and thioredoxins; E=7e-04; hypothetical protein 4516724 1795567 RB8450 Rhodopirellula baltica SH 1 hypothetical protein NP_868367.1 4514838 D 243090 CDS NP_868368.1 32475374 1791133 4516833..4517477 1 NC_005027.1 PMID: 10894752 best DB hits: BLAST: swissprot:O66452; NADD_AQUAE PROBABLE NICOTINATE-NUCLEOTIDE; E=2e-23 swissprot:P52085; NADD_ECOLI NICOTINATE-NUCLEOTIDE; E=7e-23 gb:AAG54973.1; AE005243_2 (AE005243) orf, hypothetical protein; E=1e-22 COG: aq_036; COG1057 Nicotinic acid mononucleotide adenylyltransferase; E=2e-24; nicotinate-nucleotide adenylyltransferase 4517477 nadD 1791133 nadD Rhodopirellula baltica SH 1 nicotinate-nucleotide adenylyltransferase NP_868368.1 4516833 D 243090 CDS NP_868369.1 32475375 1791240 4517483..4518115 1 NC_005027.1 best DB hits: BLAST: swissprot:P72873; Y925_SYNY3 HYPOTHETICAL 23.0 KD PROTEIN sll0925; E=3e-25 gb:AAC26156.1; (AF035751) hypothetical protein [Synechococcus sp.; E=2e-24 swissprot:P72821; YC90_SYNY3 HYPOTHETICAL 21.6 KD PROTEIN SLR1290; E=5e-24; hypothetical protein 4518115 1791240 RB8456 Rhodopirellula baltica SH 1 hypothetical protein NP_868369.1 4517483 D 243090 CDS NP_868370.1 32475376 1796332 complement(4518117..4518458) 1 NC_005027.1 hypothetical protein 4518458 1796332 RB8457 Rhodopirellula baltica SH 1 hypothetical protein NP_868370.1 4518117 R 243090 CDS NP_868371.1 32475377 1791242 4518496..4518663 1 NC_005027.1 PMID: 6806564 best DB hits: BLAST: swissprot:P21475; RS18_BACSU 30S RIBOSOMAL PROTEIN S18 (BS21); E=1e-08 pir:S66013; ribosomal protein S18 (rpsR) - Bacillus subtilis; E=1e-08 pir:R3BS18; ribosomal protein S18 - Bacillus stearothermophilus; E=1e-08 COG: BS_rpsR; COG0238 Ribosomal protein S18; E=1e-09 PFAM: PF01084; Ribosomal protein S18; E=2e-16; 30S ribosomal protein S18 4518663 rpsR 1791242 rpsR Rhodopirellula baltica SH 1 30S ribosomal protein S18 NP_868371.1 4518496 D 243090 CDS NP_868372.1 32475378 1793163 4518681..4519142 1 NC_005027.1 PMID: 9837940 best DB hits: BLAST: ddbj:BAB05718.1; (AP001514) 4-hydroxybenzoyl-CoA thioesterase; E=3e-07 swissprot:O67466; YE94_AQUAE HYPOTHETICAL PROTEIN AQ_1494 -----; E=6e-06 pir:B83525; conserved hypothetical protein PA0968 [imported] -; E=7e-06 COG: BH1999; COG0824 Predicted thioesterase; E=3e-08; 4-hydroxybenzoyl-CoA thioesterase 4519142 1793163 RB8462 Rhodopirellula baltica SH 1 4-hydroxybenzoyl-CoA thioesterase NP_868372.1 4518681 D 243090 CDS NP_868373.1 32475379 1792677 complement(4519130..4519675) 1 NC_005027.1 hypothetical protein 4519675 1792677 RB8463 Rhodopirellula baltica SH 1 hypothetical protein NP_868373.1 4519130 R 243090 CDS NP_868374.1 32475380 1790833 4519151..4519621 1 NC_005027.1 hypothetical protein 4519621 1790833 RB8464 Rhodopirellula baltica SH 1 hypothetical protein NP_868374.1 4519151 D 243090 CDS NP_868375.1 32475381 1795678 complement(4519682..4520236) 1 NC_005027.1 PMID: 8083178 PMID: 7590316 PMID: 9765558 best DB hits: BLAST: pir:B70423; transcriptional regulator FurR family - Aquifex aeolicus; E=2e-15 swissprot:P48796; FUR_CAMJE FERRIC UPTAKE REGULATION PROTEIN; E=7e-13 swissprot:Q51008; FUR_NEIGO FERRIC UPTAKE REGULATION PROTEIN; E=8e-13 COG: aq_1418; COG0735 Fe2+/Zn2+ uptake regulation proteins; E=2e-16 PFAM: PF01475; Ferric uptake regulator family; E=1.5e-22; FurR family transcriptional regulator 4520236 fur 1795678 fur Rhodopirellula baltica SH 1 FurR family transcriptional regulator NP_868375.1 4519682 R 243090 CDS NP_868376.1 32475382 1790968 complement(4520533..4520799) 1 NC_005027.1 best DB hits: BLAST: swissprot:P46726; CYSQ_MYCLE CYSQ PROTEIN HOMOLOG ----- pir:; E=0.66; 3'-phosphoadenosine 5'-phosphosulfate 3'-phosphatase 4520799 csyQ 1790968 csyQ Rhodopirellula baltica SH 1 3'-phosphoadenosine 5'-phosphosulfate 3'-phosphatase NP_868376.1 4520533 R 243090 CDS NP_868377.1 32475383 1790335 4520779..4521975 1 NC_005027.1 PMID: 20528325 best DB hits: BLAST: ddbj:BAA24923.1; (AB011029) lysineornithine decarboxylase; E=5e-59 ddbj:BAA83427.1; (AB031066) ornithine decarboxylase [Nicotiana; E=1e-46 pir:T03035; ornithine decarboxylase (EC 4.1.1.17) - common tobacco; E=1e-46 COG: aq_728; COG0019 Diaminopimelate decarboxylase; E=8e-44 PFAM: PF02784; Pyridoxal-dependent decarboxy; E=4e-55 PF00278; Pyridoxal-dependent decarboxy; E=1.8e-17; lysine/ornithine decarboxylase 4521975 odc 1790335 odc Rhodopirellula baltica SH 1 lysine/ornithine decarboxylase NP_868377.1 4520779 D 243090 CDS NP_868378.1 32475384 1794679 4521990..4523444 1 NC_005027.1 best DB hits: BLAST: gb:AAG36945.1; (AF276872) sodium and chloride-dependent; E=8e-26 embl:CAC03719.1; (AJ401467) high affinity choline transporter; E=1e-25 ddbj:BAA90484.1; (AB030947) high-affinity choline transporter; E=2e-25 COG: PA1418; COG0591 Na+/proline, Na+/panthothenate symporters and; E=7e-20 panF; COG0591 Na+/proline, Na+/panthothenate symporters and related; E=3e-10 PFAM: PF00474; Sodium:solute symporter family; E=4.5e-05; high affinity choline transporter 4523444 cht1 1794679 cht1 Rhodopirellula baltica SH 1 high affinity choline transporter NP_868378.1 4521990 D 243090 CDS NP_868379.1 32475385 1797153 4523410..4523535 1 NC_005027.1 hypothetical protein 4523535 1797153 RB8473 Rhodopirellula baltica SH 1 hypothetical protein NP_868379.1 4523410 D 243090 CDS NP_868380.1 32475386 1794510 complement(4523554..4524096) 1 NC_005027.1 hypothetical protein 4524096 1794510 RB8474 Rhodopirellula baltica SH 1 hypothetical protein NP_868380.1 4523554 R 243090 CDS NP_868381.1 32475387 1791852 complement(4524113..4524394) 1 NC_005027.1 PMID: 7925971 PMID: 8163020 best DB hits: BLAST: pir:C83123; peptidyl-prolyl cis-trans isomerase C2 PA4176; E=5e-28 gb:AAG33124.1; AF247689_1 (AF247689) parvulin; E=1e-22 gb:AAG33121.1; AF247686_1 (AF247686) parvulin; E=1e-22 COG: PA4176; COG0760 Parvulin-like peptidyl-prolyl isomerase; E=6e-29 PFAM: PF00639; PPIC-type PPIASE domain.; E=3.1e-24; peptidyl-prolyl cis-trans isomerase C2 4524394 ppiC 1791852 ppiC Rhodopirellula baltica SH 1 peptidyl-prolyl cis-trans isomerase C2 NP_868381.1 4524113 R 243090 CDS NP_868382.1 32475388 1794267 complement(4524334..4524759) 1 NC_005027.1 hypothetical protein 4524759 1794267 RB8478 Rhodopirellula baltica SH 1 hypothetical protein NP_868382.1 4524334 R 243090 CDS NP_868383.1 32475389 1790645 4524840..4526150 1 NC_005027.1 signal peptide 4526150 1790645 RB8479 Rhodopirellula baltica SH 1 signal peptide NP_868383.1 4524840 D 243090 CDS NP_868384.1 32475390 1796425 4526206..4527162 1 NC_005027.1 PMID: 3042771 PMID: 2406271 PMID: 1495415 best DB hits: BLAST: pir:F72029; phosphatidylserine decarboxylase (EC 4.1.1.65) precursor; E=3e-65 pir:D81745; probable phosphatidylserine decarboxylase (EC 4.1.1.65); E=7e-65 pir:E71482; phosphatidylserine decarboxylase (EC 4.1.1.65) precursor; E=9e-61 COG: CPn0839; COG0688 Phosphatidylserine decarboxylase; E=3e-66 PFAM: PF02666; Phosphatidylserine decarboxyla; E=1.9e-61; phosphatidylserine decarboxylase precursor 4527162 psd 1796425 psd Rhodopirellula baltica SH 1 phosphatidylserine decarboxylase precursor NP_868384.1 4526206 D 243090 CDS NP_868385.1 32475391 1794456 4527287..4527634 1 NC_005027.1 best DB hits: BLAST: pir:T35585; hypothetical protein SC6G4.34 - Streptomyces coelicolor; E=4e-08 embl:CAB88460.1; (AL353815) hypothetical protein SCD6.31c; E=8e-05 pir:C83475; hypothetical protein PA1354 [imported] - Pseudomonas; E=0.002; hypothetical protein 4527634 1794456 RB8484 Rhodopirellula baltica SH 1 hypothetical protein NP_868385.1 4527287 D 243090 CDS NP_868386.1 32475392 1793965 4527631..4528884 1 NC_005027.1 best DB hits: BLAST: pir:T35586; hypothetical protein SC6G4.35 SC6G4.35 - Streptomyces; E=2e-47 pir:G83477; probable sigma-70 factor, ECF subfamily PA1351; E=8e-45 swissprot:Q52997; YDNY_RHIME HYPOTHETICAL 47.0 KDA PROTEIN IN DNAA; E=1e-35 COG: PA1351_1; COG1595 DNA-directed RNA polymerase specialized sigma; E=2e-17; ECF subfamily RNA polymerase sigma-70 factor 4528884 1793965 RB8485 Rhodopirellula baltica SH 1 ECF subfamily RNA polymerase sigma-70 factor NP_868386.1 4527631 D 243090 CDS NP_868387.1 32475393 1795214 complement(4528983..4530158) 1 NC_005027.1 signal peptide 4530158 1795214 RB8487 Rhodopirellula baltica SH 1 signal peptide NP_868387.1 4528983 R 243090 CDS NP_868388.1 32475394 1794079 4530305..4530841 1 NC_005027.1 hypothetical protein 4530841 1794079 RB8490 Rhodopirellula baltica SH 1 hypothetical protein NP_868388.1 4530305 D 243090 CDS NP_868389.1 32475395 1797163 complement(4530812..4531447) 1 NC_005027.1 PMID: 8432708 best DB hits: BLAST: swissprot:Q45585; SIGW_BACSU RNA POLYMERASE SIGMA FACTOR SIGW; E=3e-23 gb:AAF18265.1; U22895_1 (U22895) alternative sigma factor AlgU; E=6e-18 ddbj:BAB03982.1; (AP001507) RNA polymerase ECF-type sigma factor; E=2e-17 COG: BS_sigW; COG1595 DNA-directed RNA polymerase specialized sigma; E=3e-24 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=9.9e-15; RNA polymerase sigma factor sigW 4531447 sigW 1797163 sigW Rhodopirellula baltica SH 1 RNA polymerase sigma factor sigW NP_868389.1 4530812 R 243090 CDS NP_868390.1 32475396 1793093 complement(4531481..4532854) 1 NC_005027.1 best DB hits: BLAST: pir:A75321; prepilin peptidase, type IV - Deinococcus radiodurans; E=4e-16 swissprot:P72640; LEP4_SYNY3 TYPE 4 PREPILIN-LIKE PROTEINS LEADER; E=3e-15 ddbj:BAA83726.1; (AB017809) prepilin peptidase [Escherichia coli]; E=3e-14 COG: DR2065; COG1989 Signal peptidase, cleaves prepilin-like proteins; E=4e-17 PFAM: PF01478; Type III leader peptidase famil; E=8.9e-28; prepilin peptidase, type IV 4532854 1793093 RB8494 Rhodopirellula baltica SH 1 prepilin peptidase, type IV NP_868390.1 4531481 R 243090 CDS NP_868391.1 32475397 1791360 4532893..4534416 1 NC_005027.1 PMID: 7813451 PMID: 2668276 best DB hits: BLAST: swissprot:P12769; PHR_METTH DEOXYRIBODIPYRIMIDINE PHOTOLYASE (DNA; E=3e-58 gb:AAF81696.1; AF246697_1 (AF246697) CPD-photolyase [Fowlpox; E=1e-54 swissprot:P34205; PHR_CARAU DEOXYRIBODIPYRIMIDINE PHOTOLYASE (DNA; E=6e-54 COG: MTH904; COG0415 Deoxyribodipyrimidine photolyase; E=3e-59 PFAM: PF00875; DNA photolyase; E=0.0034; deoxyribodipyrimidine photolyase 4534416 phr 1791360 phr Rhodopirellula baltica SH 1 deoxyribodipyrimidine photolyase NP_868391.1 4532893 D 243090 CDS NP_868392.1 32475398 1790044 complement(4534503..4535069) 1 NC_005027.1 hypothetical protein 4535069 1790044 RB8499 Rhodopirellula baltica SH 1 hypothetical protein NP_868392.1 4534503 R 243090 CDS NP_868393.1 32475399 1796084 complement(4535044..4535367) 1 NC_005027.1 hypothetical protein 4535367 1796084 RB8500 Rhodopirellula baltica SH 1 hypothetical protein NP_868393.1 4535044 R 243090 CDS NP_868394.1 32475400 1790886 4535391..4536536 1 NC_005027.1 PMID: 99397451 best DB hits: BLAST: ddbj:BAB09588.1; (AB018118) gene_id:MRI1.6~pir D64592~similar to; E=5e-46 gb:AAG35309.1; AF274868_1 (AF274868) sialidase NanB [Pasteurella; E=0.050 pir:D64592; hypothetical protein HP0580 - Helicobacter pylori; E=0.42 PFAM: PF02012; BNR repeat; E=0.88; hypothetical protein 4536536 1790886 RB8501 Rhodopirellula baltica SH 1 hypothetical protein NP_868394.1 4535391 D 243090 CDS NP_868395.1 32475401 1792589 complement(4536479..4536637) 1 NC_005027.1 hypothetical protein 4536637 1792589 RB8503 Rhodopirellula baltica SH 1 hypothetical protein NP_868395.1 4536479 R 243090 CDS NP_868396.1 32475402 1795787 complement(4536661..4536996) 1 NC_005027.1 hypothetical protein 4536996 1795787 RB8504 Rhodopirellula baltica SH 1 hypothetical protein NP_868396.1 4536661 R 243090 CDS NP_868397.1 32475403 1791926 complement(4537127..4538446) 1 NC_005027.1 best DB hits: BLAST: pir:H69064; serinethreonine protein kinase related protein -; E=4e-04 swissprot:P77774; YFGL_ECOLI HYPOTHETICAL 41.9 KD PROTEIN IN; E=0.004 gb:AAG20856.1; (AE005154) Vng6189h [Halobacterium sp. NRC-1]; E=0.007 COG: MTH1485; COG1520 Uncharacterized proteins of WD40-like repeat family; E=4e-05 PFAM: PF01011; PQQ enzyme repeat; E=0.03; serine/threonine protein kinase related protein 4538446 1791926 RB8505 Rhodopirellula baltica SH 1 serine/threonine protein kinase related protein NP_868397.1 4537127 R 243090 CDS NP_868398.1 32475404 1791822 complement(4538454..4538720) 1 NC_005027.1 hypothetical protein 4538720 1791822 RB8507 Rhodopirellula baltica SH 1 hypothetical protein NP_868398.1 4538454 R 243090 CDS NP_868399.1 32475405 1790987 4538651..4539046 1 NC_005027.1 hypothetical protein 4539046 1790987 RB8509 Rhodopirellula baltica SH 1 hypothetical protein NP_868399.1 4538651 D 243090 CDS NP_868400.1 32475406 1791846 complement(4539096..4540442) 1 NC_005027.1 PMID: 1333566 best DB hits: BLAST: pir:F69031; homoserine dehydrogenase (EC 1.1.1.3) - Methanobacterium; E=4e-81 gb:AAF21129.1; L78665_3 (L78665) homoserine dehydrogenase; E=2e-80 swissprot:P29365; DHOM_PSEAE HOMOSERINE DEHYDROGENASE (HDH); E=1e-77 COG: MTH1232; COG0460 Homoserine dehydrogenase; E=4e-82 PFAM: PF02737; 3-hydroxyacyl-CoA dehydrogenase; E=0.85 PF02254; KTN NAD-binding domain; E=0.19 PF01408; Oxidoreductase, NAD-bind; E=0.73; homoserine dehydrogenase 4540442 hom 1791846 hom Rhodopirellula baltica SH 1 homoserine dehydrogenase NP_868400.1 4539096 R 243090 CDS NP_868401.1 32475407 1790604 4540419..4540760 1 NC_005027.1 hypothetical protein 4540760 1790604 RB8511 Rhodopirellula baltica SH 1 hypothetical protein NP_868401.1 4540419 D 243090 CDS NP_868402.1 32475408 1797191 complement(4540573..4540812) 1 NC_005027.1 hypothetical protein 4540812 1797191 RB8512 Rhodopirellula baltica SH 1 hypothetical protein NP_868402.1 4540573 R 243090 CDS NP_868403.1 32475409 1795120 4540912..4541316 1 NC_005027.1 hypothetical protein 4541316 1795120 RB8513 Rhodopirellula baltica SH 1 hypothetical protein NP_868403.1 4540912 D 243090 CDS NP_868404.1 32475410 1792828 4541316..4542917 1 NC_005027.1 best DB hits: BLAST: swissprot:P54545; YQJH_BACSU HYPOTHETICAL 47.0 KD PROTEIN IN; E=0.15 PFAM: PF00817; impB/mucB/samB family; E=0.87; hypothetical protein 4542917 yqjH 1792828 yqjH Rhodopirellula baltica SH 1 hypothetical protein NP_868404.1 4541316 D 243090 CDS NP_868405.1 32475411 1790803 complement(4542940..4545015) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:D83024; probable secretion protein PA4974 [imported] -; E=0.28 pir:A82540; outer membrane export factor XF2586 [imported] - Xylella; E=0.31 pir:B83071; hypothetical protein PA4592 [imported] - Pseudomonas; E=0.45 PFAM: PF02321; Outer membrane efflux protein; E=8.2e-07; secretion protein 4545015 1790803 RB8516 Rhodopirellula baltica SH 1 secretion protein NP_868405.1 4542940 R 243090 CDS NP_868406.1 32475412 1793998 4543984..4545096 1 NC_005027.1 best DB hits: PFAM: PF00559; Retroviral Vif (Viral infectivity) p; E=0.47; signal peptide 4545096 1793998 RB8518 Rhodopirellula baltica SH 1 signal peptide NP_868406.1 4543984 D 243090 CDS NP_868407.1 32475413 1796085 complement(4545120..4546163) 1 NC_005027.1 hypothetical protein 4546163 1796085 RB8519 Rhodopirellula baltica SH 1 hypothetical protein NP_868407.1 4545120 R 243090 CDS NP_868408.1 32475414 1795507 4546045..4546170 1 NC_005027.1 hypothetical protein 4546170 1795507 RB8520 Rhodopirellula baltica SH 1 hypothetical protein NP_868408.1 4546045 D 243090 CDS NP_868409.1 32475415 1796407 4546213..4547121 1 NC_005027.1 best DB hits: BLAST: embl:CAB76071.1; (AL157953) rRNA methylase [Streptomyces; E=1e-22 swissprot:Q10543; Y881_MYCTU HYPOTHETICAL TRNARRNA; E=7e-18 pir:C82904; rRNA methylase UU327 [imported] - Ureaplasma urealyticum; E=3e-14 COG: Rv0881; COG0566 rRNA methylases; E=7e-19 PFAM: PF00588; SpoU rRNA Methylase; E=2.6e-26; rRNA methylase 4547121 1796407 RB8522 Rhodopirellula baltica SH 1 rRNA methylase NP_868409.1 4546213 D 243090 CDS NP_868410.1 32475416 1791499 4547108..4548595 1 NC_005027.1 PMID: 8969504 best DB hits: BLAST: pir:E71667; 2-acylglycerophosphoethanolamine acyltransferase (aas); E=6e-18 gb:AAG19674.1; (AE005055) Vng1339c [Halobacterium sp. NRC-1]; E=5e-17 pir:A69831; probable acid--CoA ligase (EC 6.2.1.-) yhfL [similarity]; E=8e-17 COG: RP620_3; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases; E=5e-19 VNG1339C; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid; E=5e-18 BS_yhfL; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases; E=7e-18 PFAM: PF00501; AMP-binding enzyme; E=1.3e-08 PF01781; Ribosomal L38e protein family; E=0.56; 2-acylglycerophosphoethanolamine acyltransferase (aas) 4548595 lcfA 1791499 lcfA Rhodopirellula baltica SH 1 2-acylglycerophosphoethanolamine acyltransferase (aas) NP_868410.1 4547108 D 243090 CDS NP_868411.1 32475417 1793973 complement(4548811..4549104) 1 NC_005027.1 hypothetical protein 4549104 1793973 RB8526 Rhodopirellula baltica SH 1 hypothetical protein NP_868411.1 4548811 R 243090 CDS NP_868412.1 32475418 1793118 4549097..4550089 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein 4550089 1793118 RB8527 Rhodopirellula baltica SH 1 hypothetical protein NP_868412.1 4549097 D 243090 CDS NP_868413.1 32475419 1792315 4550184..4550294 1 NC_005027.1 hypothetical protein 4550294 1792315 RB8528 Rhodopirellula baltica SH 1 hypothetical protein NP_868413.1 4550184 D 243090 CDS NP_868414.1 32475420 1793071 4550288..4550716 1 NC_005027.1 signal peptide 4550716 1793071 RB8529 Rhodopirellula baltica SH 1 signal peptide NP_868414.1 4550288 D 243090 CDS NP_868415.1 32475421 1796063 complement(4550725..4550886) 1 NC_005027.1 best DB hits: BLAST: pir:D64585; cag pathogenicity island protein cag5 - Helicobacter; E=0.63 pir:F71927; cag island protein, DNA transfer protein - Helicobacter; E=0.63 gb:AAF80195.1; AF282852_5 (AF282852) Cag-beta [Helicobacter; E=0.63; cag pathogenicity island protein cag5 4550886 1796063 RB8530 Rhodopirellula baltica SH 1 cag pathogenicity island protein cag5 NP_868415.1 4550725 R 243090 CDS NP_868416.1 32475422 1795812 complement(4550911..4552125) 1 NC_005027.1 PMID: 9649434 PMID: 9546395 best DB hits: BLAST: swissprot:O05523; YDIJ_BACSU HYPOTHETICAL 29.1 KDA PROTEIN IN; E=4e-18 swissprot:Q9ZM59; TATC_HELPJ SEC-INDEPENDENT PROTEIN TRANSLOCASE; E=6e-18 swissprot:Q9ZCG6; TATC_RICPR SEC-INDEPENDENT PROTEIN TRANSLOCASE; E=7e-18 COG: BS_ydiJ; COG0805 Sec-independent protein secretion pathway component; E=4e-19 VNG2267G; COG0805 Sec-independent protein secretion pathway; E=9e-06 PFAM: PF00902; MttB family UPF0032; E=4.5e-35; Sec-independent protein translocase tatC-like protein 4552125 tatC 1795812 tatC Rhodopirellula baltica SH 1 Sec-independent protein translocase tatC-like protein NP_868416.1 4550911 R 243090 CDS NP_868417.1 32475423 1790653 4552172..4552762 1 NC_005027.1 best DB hits: BLAST: pir:H75163; intracellular proteinase (pfpi) PAB0311 - Pyrococcus; E=1e-30 pir:F72722; hypothetical protein APE0319 - Aeropyrum pernix (strain; E=4e-30 gb:AAB89965.1; (AE001016) intracellular protease (pfpI); E=2e-29 COG: PAB0311; COG0693 intracellular protease/amidase; E=1e-31 PFAM: PF01965; ThiJ/PfpI family; E=1.1e-39; intracellular proteinase pfpI 4552762 pfpI 1790653 pfpI Rhodopirellula baltica SH 1 intracellular proteinase pfpI NP_868417.1 4552172 D 243090 CDS NP_868418.1 32475424 1794195 4552802..4552930 1 NC_005027.1 hypothetical protein 4552930 1794195 RB8534 Rhodopirellula baltica SH 1 hypothetical protein NP_868418.1 4552802 D 243090 CDS NP_868419.1 32475425 1795259 complement(4552942..4553163) 1 NC_005027.1 hypothetical protein 4553163 1795259 RB8535 Rhodopirellula baltica SH 1 hypothetical protein NP_868419.1 4552942 R 243090 CDS NP_868420.1 32475426 1796928 4553098..4554066 1 NC_005027.1 hypothetical protein 4554066 1796928 RB8536 Rhodopirellula baltica SH 1 hypothetical protein NP_868420.1 4553098 D 243090 CDS NP_868421.1 32475427 1794724 complement(4554117..4554302) 1 NC_005027.1 hypothetical protein 4554302 1794724 RB8538 Rhodopirellula baltica SH 1 hypothetical protein NP_868421.1 4554117 R 243090 CDS NP_868422.1 32475428 1791940 4554349..4554768 1 NC_005027.1 best DB hits: BLAST: pir:A70418; conserved hypothetical protein aq_1359 - Aquifex; E=2e-08 pir:H75488; conserved hypothetical protein - Deinococcus radiodurans; E=5e-08 pir:B81033; N-acetylglutamate synthase NMB1876 [imported] -; E=9e-07 COG: aq_1359; COG1246 N-acetylglutamate synthase and related; E=2e-09 PFAM: PF00583; Acetyltransferase (GNAT) family; E=6e-15; N-acetylglutamate synthase 4554768 argA 1791940 argA Rhodopirellula baltica SH 1 N-acetylglutamate synthase NP_868422.1 4554349 D 243090 CDS NP_868423.1 32475429 1791642 4554758..4555831 1 NC_005027.1 best DB hits: BLAST: pir:E75542; probable endoglucanase - Deinococcus radiodurans (strain; E=6e-48 gb:AAG19796.1; (AE005064) endoglucanase; CelM [Halobacterium sp.; E=2e-47 pir:A69157; endo-1,4-beta-glucanase - Methanobacterium; E=8e-47 COG: DR0229; COG1363 Cellulase M and related proteins; E=6e-49; endoglucanase 4555831 celM 1791642 celM Rhodopirellula baltica SH 1 endoglucanase NP_868423.1 4554758 D 243090 CDS NP_868424.1 32475430 1796439 complement(4556001..4557038) 1 NC_005027.1 PMID: 9576794 best DB hits: BLAST: swissprot:O04905; UMPK_ARATH URIDYLATE KINASE (UK) (URIDINE; E=1e-30 pir:T47842; URIDYLATE KINASE-like protein - Arabidopsis thaliana; E=9e-30 gb:AAB27365.1; UMP kinase [Saccharomyces cerevisiae, Peptide, 204; E=1e-29 COG: YKL024c; COG0563 Adenylate kinase and related kinases; E=1e-30 PFAM: PF00406; Adenylate kinase; E=2.6e-39; uridylate kinase 4557038 pyrH 1796439 pyrH Rhodopirellula baltica SH 1 uridylate kinase NP_868424.1 4556001 R 243090 CDS NP_868425.1 32475431 1791568 complement(4557105..4559942) 1 NC_005027.1 PMID: 7005898 PMID: 7025207 PMID: 6256345 best DB hits: BLAST: pir:H83533; alanyl-tRNA synthetase PA0903 [imported] - Pseudomonas; E=1e-132 swissprot:O67323; SYA_AQUAE ALANYL-TRNA SYNTHETASE (ALANINE--TRNA; E=1e-130 pir:F75289; alanyl-tRNA synthetase - Deinococcus radiodurans (strain; E=1e-129 COG: PA0903; COG0013 Alanyl-tRNA synthetase; E=1e-133 PFAM: PF01411; tRNA synthetases class II (A); E=2.8e-255 PF02272; DHHA1 domain; E=5.4e-20; alanyl-tRNA synthetase 4559942 alaS 1791568 alaS Rhodopirellula baltica SH 1 alanyl-tRNA synthetase NP_868425.1 4557105 R 243090 CDS NP_868426.1 32475432 1795733 complement(4559942..4560166) 1 NC_005027.1 hypothetical protein 4560166 1795733 RB8546 Rhodopirellula baltica SH 1 hypothetical protein NP_868426.1 4559942 R 243090 CDS NP_868427.1 32475433 1794684 4560165..4561271 1 NC_005027.1 best DB hits: BLAST: pir:F65012; hypothetical protein b2385 - Escherichia coli (strain; E=1e-55 gb:AAG57511.1; AE005469_11 (AE005469) peptidase; E=1e-53 pir:D75419; proline dipeptidase - Deinococcus radiodurans (strain; E=1e-49 COG: ypdF; COG0006 Xaa-Pro aminopeptidase; E=1e-56 PFAM: PF00557; metallopeptidase M24; E=2.9e-50; peptidase 4561271 1794684 RB8547 Rhodopirellula baltica SH 1 peptidase NP_868427.1 4560165 D 243090 CDS NP_868428.1 32475434 1792160 4561336..4561863 1 NC_005027.1 PMID: 7592499 best DB hits: BLAST: pir:H69580; acetyl-CoA carboxylase (biotin carboxyl carrier subunit); E=1e-18 gb:AAB00182.1; (U36245) biotin carboxyl carrier protein [Bacillus; E=1e-17 swissprot:P49786; BCCP_BACSU BIOTIN CARBOXYL CARRIER PROTEIN OF; E=1e-17 COG: BS_accB; COG0511 Biotin carboxyl carrier protein of acetyl-CoA; E=1e-19 PFAM: PF00364; Biotin-requiring enzyme; E=1.5e-25; acetyl-CoA carboxylase (biotin carboxyl carrier subunit) accB 4561863 accB 1792160 accB Rhodopirellula baltica SH 1 acetyl-CoA carboxylase (biotin carboxyl carrier subunit) accB NP_868428.1 4561336 D 243090 CDS NP_868429.1 32475435 1790969 4561867..4563219 1 NC_005027.1 PMID: 8102363 best DB hits: BLAST: gb:AAB88214.1; (U59234) biotin carboxylase [Synechococcus sp. PCC; E=1e-139 swissprot:Q06862; ACCC_ANASP BIOTIN CARBOXYLASE (A SUBUNIT OF; E=1e-138 pir:S74380; biotin carboxylase accC - Synechocystis sp. (strain PCC; E=1e-136 COG: sll0053; COG0439 Biotin carboxylase; E=1e-137 PFAM: PF00289; Carbamoyl-phosphate synthase L; E=5.1e-48 PF02786; Carbamoyl-phosphate synthase L; E=1.4e-100 PF02785; Biotin carboxylase C-terminal; E=2.7e-58; biotin carboxylase 4563219 accC 1790969 accC Rhodopirellula baltica SH 1 biotin carboxylase NP_868429.1 4561867 D 243090 CDS NP_868430.1 32475436 1791119 4563289..4564425 1 NC_005027.1 best DB hits: BLAST: embl:CAA04730.1; (AJ001401) HpnA protein [Zymomonas mobilis]; E=3e-17 swissprot:P73212; DFRA_SYNY3 DIHYDROFLAVONOL-4-REDUCTASE; E=1e-13 pir:C83067; hypothetical protein PA4631 [imported] - Pseudomonas; E=3e-12 COG: slr1706; COG0451 Nucleoside-diphosphate-sugar epimerases; E=1e-14 PFAM: PF01370; NAD dependent epimerase/dehydra; E=0.51 PF01073; 3-beta hydroxysteroid dehydroge; E=1.6e-06; HpnA protein 4564425 hpnA 1791119 hpnA Rhodopirellula baltica SH 1 HpnA protein NP_868430.1 4563289 D 243090 CDS NP_868431.1 32475437 1794386 complement(4564021..4564509) 1 NC_005027.1 signal peptide 4564509 1794386 RB8552 Rhodopirellula baltica SH 1 signal peptide NP_868431.1 4564021 R 243090 CDS NP_868432.1 32475438 1796357 4564556..4565191 1 NC_005027.1 best DB hits: BLAST: embl:CAC17654.1; (AL450450) ECF sigma factor; E=0.003 ddbj:BAB03982.1; (AP001507) RNA polymerase ECF-type sigma; E=0.005 swissprot:Q45585; SIGW_BACSU RNA POLYMERASE SIGMA FACTOR SIGW; E=0.005 COG: BH0263; COG1595 DNA-directed RNA polymerase specialized sigma; E=4e-04 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=5.2e-10; ECF sigma factor 4565191 sigW 1796357 sigW Rhodopirellula baltica SH 1 ECF sigma factor NP_868432.1 4564556 D 243090 CDS NP_868433.1 32475439 1793675 4565184..4566725 1 NC_005027.1 PMID: 7774814 best DB hits: BLAST: pir:B70936; probable serinethreonine-specific protein kinase (EC; E=3e-31 embl:CAA18685.1; (AL022602) serinethreonine protein; E=5e-31 ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=6e-30 COG: Rv2176; COG0515 Serine/threonine protein kinases; E=3e-32 PFAM: PF00069; Protein kinase domain; E=1.2e-49; serine/threonine-specific protein kinase 2 4566725 pkn2 1793675 pkn2 Rhodopirellula baltica SH 1 serine/threonine-specific protein kinase 2 NP_868433.1 4565184 D 243090 CDS NP_868434.1 32475440 1793972 4566722..4568275 1 NC_005027.1 best DB hits: BLAST: pir:G82380; hypothetical protein VCA1075 [imported] - Vibrio; E=0.50; hypothetical protein 4568275 1793972 RB8557 Rhodopirellula baltica SH 1 hypothetical protein NP_868434.1 4566722 D 243090 CDS NP_868435.1 32475441 1795056 complement(4568305..4568877) 1 NC_005027.1 signal peptide 4568877 1795056 RB8559 Rhodopirellula baltica SH 1 signal peptide NP_868435.1 4568305 R 243090 CDS NP_868436.1 32475442 1796068 complement(4568962..4570281) 1 NC_005027.1 hypothetical protein 4570281 1796068 RB8561 Rhodopirellula baltica SH 1 hypothetical protein NP_868436.1 4568962 R 243090 CDS NP_868437.1 32475443 1792126 complement(4570281..4571912) 1 NC_005027.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 4571912 pgm 1792126 pgm Rhodopirellula baltica SH 1 phosphoglyceromutase NP_868437.1 4570281 R 243090 CDS NP_868438.1 32475444 1793507 complement(4572043..4572426) 1 NC_005027.1 PMID: 10500158 PMID: 10636862 best DB hits: BLAST: swissprot:Q10784; GLBN_MYCTU HEMOGLOBIN HBN ----- pir: C70761; E=2e-18 gb:AAA29446.2; (M57542) hemoglobin major component [Paramecium; E=3e-09 swissprot:P15160; GLB_PARCA MYOGLOBIN (HEMOGLOBIN) ----- pir:; E=2e-08 COG: Rv1542c; COG2346 Hemoglobin-like proteins; E=2e-19 PFAM: PF01152; Protozoan/cyanobacterial globin; E=5.3e-25; hemoglobin-like protein HbN 4572426 glbN 1793507 glbN Rhodopirellula baltica SH 1 hemoglobin-like protein HbN NP_868438.1 4572043 R 243090 CDS NP_868439.1 32475445 1792956 complement(4572448..4573365) 1 NC_005027.1 PMID: 7952181 best DB hits: BLAST: swissprot:P42419; IOLI_BACSU IOLI PROTEIN ----- pir: A69646; E=0.026 COG: BS_iolI; COG1082 Predicted endonucleases; E=0.002; xylose isomerase 4573365 iolI 1792956 iolI Rhodopirellula baltica SH 1 xylose isomerase NP_868439.1 4572448 R 243090 CDS NP_868440.1 32475446 1792881 complement(4573453..4575297) 1 NC_005027.1 hypothetical protein 4575297 1792881 RB8568 Rhodopirellula baltica SH 1 hypothetical protein NP_868440.1 4573453 R 243090 CDS NP_868441.1 32475447 1796310 complement(4575518..4575709) 1 NC_005027.1 hypothetical protein 4575709 1796310 RB8572 Rhodopirellula baltica SH 1 hypothetical protein NP_868441.1 4575518 R 243090 CDS NP_868442.1 32475448 1795448 complement(4575565..4575681) 1 NC_005027.1 hypothetical protein 4575681 1795448 RB8573 Rhodopirellula baltica SH 1 hypothetical protein NP_868442.1 4575565 R 243090 CDS NP_868443.1 32475449 1790551 complement(4575727..4576830) 1 NC_005027.1 best DB hits: BLAST: pir:E75284; conserved hypothetical protein - Deinococcus radiodurans; E=1e-36 gb:AAK05795.1; AE006400_5 (AE006400) conserved hypothetical; E=1e-35 pir:T50502; hypothetical protein T22D6.110 - Arabidopsis thaliana; E=7e-34 COG: DR2359; COG2957 Peptidylarginine deiminase and related enzymes; E=1e-37; peptidylarginine deiminase or related enzyme 4576830 1790551 RB8574 Rhodopirellula baltica SH 1 peptidylarginine deiminase or related enzyme NP_868443.1 4575727 R 243090 CDS NP_868444.1 32475450 1797164 complement(4576842..4577132) 1 NC_005027.1 hypothetical protein 4577132 1797164 RB8576 Rhodopirellula baltica SH 1 hypothetical protein NP_868444.1 4576842 R 243090 CDS NP_868445.1 32475451 1790217 4577393..4577734 1 NC_005027.1 best DB hits: BLAST: pir:B53373; hypothetical protein 1 (rpoN 3' region) - Pseudomonas; E=0.004 pir:G82065; probable sigma-54 modulation protein VC2530 [imported]; E=0.005 swissprot:P17160; RP5M_AZOVI PROBABLE SIGMA(54) MODULATION; E=0.007 COG: VC2530; COG1544 Ribosome-associated protein Y (PSrp-1); E=5e-04 PFAM: PF02482; Sigma 54 modulation protein / S; E=0.0074; sigma-54 modulation protein 4577734 1790217 RB8580 Rhodopirellula baltica SH 1 sigma-54 modulation protein NP_868445.1 4577393 D 243090 CDS NP_868446.1 32475452 1796260 4577819..4578298 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB04547.1; (AP001510) PTS system, fructose-specific enzyme; E=6e-19 gb:AAK05057.1; AE006330_5 (AE006330) fructose-specific PTS system; E=9e-18 ddbj:BAB03332.1; (AB035450) fructose specific permease; E=1e-16 COG: BH0828_1; COG1762 Phosphotransferase system; E=3e-19 TP0085; COG1762 Phosphotransferase system mannitol/fructose-specific; E=5e-16 NMB0736; COG1762 Phosphotransferase system; E=7e-14 PFAM: PF00359; Phosphoenolpyruvate-dependent suga; E=3.6e-13; PTS system, fructose-specific enzyme II, BC component 4578298 fruA 1796260 fruA Rhodopirellula baltica SH 1 PTS system, fructose-specific enzyme II, BC component NP_868446.1 4577819 D 243090 CDS NP_868447.1 32475453 1795816 4578438..4578785 1 NC_005027.1 PMID: 9172326 best DB hits: BLAST: swissprot:O83598; PTHP_TREPA PHOSPHOCARRIER PROTEIN HPR; E=8e-11 pir:D69607; catabolite repression protein crh [validated] -; E=1e-09 embl:CAB10076.1; (Z97203) histidine containing protein; E=2e-09 COG: TP0589; COG1925 Phosphotransferase system, HPr-related proteins; E=9e-12 PFAM: PF00381; PTS HPr component phosphorylation si; E=5.8e-25; phosphocarrier protein HPr 4578785 ptsH 1795816 ptsH Rhodopirellula baltica SH 1 phosphocarrier protein HPr NP_868447.1 4578438 D 243090 CDS NP_868448.1 32475454 1791315 4578825..4579148 1 NC_005027.1 hypothetical protein 4579148 1791315 RB8590 Rhodopirellula baltica SH 1 hypothetical protein NP_868448.1 4578825 D 243090 CDS NP_868449.1 32475455 1792147 4579130..4580950 1 NC_005027.1 PMID: 7670643 best DB hits: BLAST: swissprot:P42014; PT1_BACST PHOSPHOENOLPYRUVATE-PROTEIN; E=1e-108 swissprot:O83018; PT1_BACSP PHOSPHOENOLPYRUVATE-PROTEIN; E=1e-108 ddbj:BAB06792.1; (AP001517) PTS system, enzyme I [Bacillus; E=1e-106 COG: BH3073; COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI; E=1e-107 PFAM: PF00391; PEP-utilizing enzyme, mobile; E=4e-21 PF02896; PEP-utilizing enzyme, TIM bar; E=1.4e-115; phosphoenolpyruvate-protein phosphotransferase 4580950 ptsI 1792147 ptsI Rhodopirellula baltica SH 1 phosphoenolpyruvate-protein phosphotransferase NP_868449.1 4579130 D 243090 CDS NP_868450.1 32475456 1796570 4580947..4581648 1 NC_005027.1 best DB hits: BLAST: pir:S77440; hypothetical protein sll1084 - Synechocystis sp. (strain; E=2e-14 embl:CAB75381.1; (AL139298) hypothetical protein SCC88.11c; E=6e-09 pir:E72374; hypothetical protein - Thermotoga maritima (strain; E=4e-05 COG: sll1084; COG1032 Fe-S oxidoreductases family 2; E=2e-15 PFAM: PF02474; Nodulation protein A (NodA); E=0.78; hypothetical protein 4581648 1796570 RB8592 Rhodopirellula baltica SH 1 hypothetical protein NP_868450.1 4580947 D 243090 CDS NP_868451.1 32475457 1796392 4581645..4581770 1 NC_005027.1 hypothetical protein 4581770 1796392 RB8594 Rhodopirellula baltica SH 1 hypothetical protein NP_868451.1 4581645 D 243090 CDS NP_868452.1 32475458 1794293 4581760..4583364 1 NC_005027.1 PMID: 2011493 PMID: 8415644 PMID: 11328869 best DB hits: BLAST: pir:B82538; ribonuclease E XF2607 [imported] - Xylella fastidiosa; E=1e-100 pir:H83273; ribonuclease E PA2976 [imported] - Pseudomonas; E=7e-97 gb:AAK03075.1; (AE006138) Rne [Pasteurella multocida]; E=2e-95 COG: XF2607; COG1530 Ribonucleases G and E; E=1e-101 PFAM: PF00575; S1 RNA binding domain; E=3.6e-07; ribonuclease E 4583364 rne 1794293 rne Rhodopirellula baltica SH 1 ribonuclease E NP_868452.1 4581760 D 243090 CDS NP_868453.1 32475459 1795226 4583361..4584935 1 NC_005027.1 PMID: 10809675 best DB hits: BLAST: gb:AAF72520.1; AF248951_1 (AF248951) mucin-desulfating sulfatase; E=2e-56 pir:T44602; phosphonate monoester hydrolase (EC 3.1.3.-) PEH; E=3e-30 pir:F83354; probable sulfatase PA2333 [imported] - Pseudomonas; E=1e-26 COG: PA2333; COG3119 Arylsulfatase A and related enzymes; E=9e-28 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=9e-08 VC2600; COG3083 Predicted hydrolase of alkaline phosphatase; E=9e-07 PFAM: PF00884; Sulfatase; E=2.6e-65; mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase) 4584935 mdsA 1795226 mdsA Rhodopirellula baltica SH 1 mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase) NP_868453.1 4583361 D 243090 CDS NP_868454.1 32475460 1790287 4584856..4586307 1 NC_005027.1 PMID: 9634230 best DB hits: BLAST: gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=8e-20 ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=3e-18 pir:F70837; probable sulfatase (EC 3.1.6.-) atsG - Mycobacterium; E=2e-15 COG: Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=2e-16 BS_yvgJ; COG1368 Phosphoglycerol transferase and related proteins,; E=0.001 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=0.002 PFAM: PF01663; Type I phosphodiesterase / nucle; E=0.89 PF00884; Sulfatase; E=7.3e-28; sulfatase atsG 4586307 GALNS 1790287 GALNS Rhodopirellula baltica SH 1 sulfatase atsG NP_868454.1 4584856 D 243090 CDS NP_868455.1 32475461 1792482 4586329..4588524 1 NC_005027.1 PMID: 2941757 PMID: 2211698 PMID: 9036855 best DB hits: BLAST: gb:AAC44462.1; (U60056) CbbBc [Ralstonia eutropha]; E=7e-98 pir:T35749; probable formate dehydrogenase - Streptomyces coelicolor; E=8e-96 pir:A82998; probable oxidoreductase PA5181 [imported] - Pseudomonas; E=7e-93 COG: PA5181; COG0243 Anaerobic dehydrogenases, typically; E=6e-94 MTH1552; COG3383 Uncharacterized anaerobic dehydrogenase; E=9e-45 PH1353; COG0243 Anaerobic dehydrogenases, typically; E=7e-38 PFAM: PF00384; Molybdopterin oxidoreductases; E=2e-36 PF01568; Molydopterin dinucleotide bin; E=1.7e-08; formate dehydrogenase-like protein 4588524 fdhF 1792482 fdhF Rhodopirellula baltica SH 1 formate dehydrogenase-like protein NP_868455.1 4586329 D 243090 CDS NP_868456.1 32475462 1797165 complement(4588490..4588870) 1 NC_005027.1 hypothetical protein 4588870 1797165 RB8599 Rhodopirellula baltica SH 1 hypothetical protein NP_868456.1 4588490 R 243090 CDS NP_868457.1 32475463 1796246 4588912..4590165 1 NC_005027.1 signal peptide 4590165 1796246 RB8601 Rhodopirellula baltica SH 1 signal peptide NP_868457.1 4588912 D 243090 CDS NP_868458.1 32475464 1791526 4590203..4593886 1 NC_005027.1 PMID: 7610180 PMID: 8617725 best DB hits: BLAST: pir:D81040; cytochrome c-type biogenesis protein, probable NMB1803; E=2e-18 pir:B81986; probable membrane protein NMA0660 [imported] - Neisseria; E=2e-18 pir:H71862; probable cytochrome C-type biogenesis protein -; E=7e-17 COG: NMB1803; COG0755 Cytochrome c-type biogenesis protein (heme exporter; E=2e-19 APE2274; COG1138 Cytochrome c biogenesis factor; E=5e-04 NMB1804; COG1333 ResB protein required for cytochrome c biosynthesis; E=0.002 PFAM: PF02590; Uncharacterized ACR, COG1576; E=0.15 PF01578; Cytochrome C assembly protein; E=0.036; cytochrome c-type biogenesis protein 4593886 ccsA 1791526 ccsA Rhodopirellula baltica SH 1 cytochrome c-type biogenesis protein NP_868458.1 4590203 D 243090 CDS NP_868459.1 32475465 1796574 4593970..4594224 1 NC_005027.1 hypothetical protein 4594224 1796574 RB8611 Rhodopirellula baltica SH 1 hypothetical protein NP_868459.1 4593970 D 243090 CDS NP_868460.1 32475466 1791835 complement(4594213..4595094) 1 NC_005027.1 PMID: 1479344 best DB hits: BLAST: pir:C83249; 3-demethylubiquinone-9 3-methyltransferase PA3171; E=0.004 swissprot:P08442; YAT1_SYNP6 ATP SYNTHASE SUBUNITS REGION ORF 1; E=0.055 pir:S76629; hypothetical protein - Synechocystis sp. (strain PCC; E=0.19 COG: PA3171; COG2227; E=3e-04; 3-demethylubiquinone-9 3-methyltransferase 4595094 ubiG 1791835 ubiG Rhodopirellula baltica SH 1 3-demethylubiquinone-9 3-methyltransferase NP_868460.1 4594213 R 243090 CDS NP_868461.1 32475467 1793224 complement(4595082..4595960) 1 NC_005027.1 PMID: 10548741 best DB hits: BLAST: gb:AAB89983.1; (AE001017) phosphoribosylformylglycinamidine; E=2e-33 ddbj:BAA20816.1; (AB002359) KIAA0361 [Homo sapiens]; E=2e-26 swissprot:O15067; PUR4_HUMAN PHOSPHORIBOSYLFORMYLGLYCINAMIDINE; E=2e-26 COG: AF1260; COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase,; E=1e-34 NMB1996_2; COG0047 Phosphoribosylformylglycinamidine (FGAM); E=3e-22 HI0752_2; COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase,; E=1e-20; phosphoribosylformylglycinamidine synthase I (purQ) 4595960 pfaS 1793224 pfaS Rhodopirellula baltica SH 1 phosphoribosylformylglycinamidine synthase I (purQ) NP_868461.1 4595082 R 243090 CDS NP_868462.1 32475468 1795773 4595974..4598340 1 NC_005027.1 best DB hits: BLAST: pir:E69869; thioredoxin related protein ykvV - Bacillus subtilis; E=1e-07 pir:E69891; cytochrome c biogenesis protein CycX homolog homolog; E=4e-07 swissprot:P43221; TLPA_BRAJA THIOL:DISULFIDE INTERCHANGE PROTEIN; E=3e-06 COG: BS_ykvV; COG0526 Thiol-disulfide isomerase and thioredoxins; E=9e-09 PFAM: PF02369; Bacterial Ig-like domain (group 1); E=0.033; thioredoxin related protein ykvV 4598340 1795773 RB8615 Rhodopirellula baltica SH 1 thioredoxin related protein ykvV NP_868462.1 4595974 D 243090 CDS NP_868463.1 32475469 1796312 4598321..4599388 1 NC_005027.1 hypothetical protein 4599388 1796312 RB8622 Rhodopirellula baltica SH 1 hypothetical protein NP_868463.1 4598321 D 243090 CDS NP_868464.1 32475470 1792186 4599385..4599855 1 NC_005027.1 signal peptide 4599855 1792186 RB8625 Rhodopirellula baltica SH 1 signal peptide NP_868464.1 4599385 D 243090 CDS NP_868465.1 32475471 1796053 4599960..4600265 1 NC_005027.1 hypothetical protein 4600265 1796053 RB8628 Rhodopirellula baltica SH 1 hypothetical protein NP_868465.1 4599960 D 243090 CDS NP_868466.1 32475472 1796740 4600323..4600619 1 NC_005027.1 best DB hits: BLAST: pir:B70403; hypothetical protein aq_1194 - Aquifex aeolicus -----; E=0.009 swissprot:P72821; YC90_SYNY3 HYPOTHETICAL 21.6 KD PROTEIN SLR1290; E=0.013 pir:T34610; hypothetical protein SC10A7.07 - Streptomyces coelicolor; E=0.069; hypothetical protein 4600619 1796740 RB8629 Rhodopirellula baltica SH 1 hypothetical protein NP_868466.1 4600323 D 243090 CDS NP_868467.1 32475473 1796723 4600763..4601035 1 NC_005027.1 hypothetical protein 4601035 1796723 RB8630 Rhodopirellula baltica SH 1 hypothetical protein NP_868467.1 4600763 D 243090 CDS NP_868468.1 32475474 1794792 4601126..4602520 1 NC_005027.1 PMID: 2199330 best DB hits: BLAST: swissprot:Q58131; ARGD_METJA ACETYLORNITHINE AMINOTRANSFERASE; E=2e-23 swissprot:P30268; YKAB_BACFI PROBABLE AMINOTRANSFERASE IN KATA; E=3e-19 embl:CAC11216.1; (AL445063) L-2,; E=5e-19 COG: MJ0721; COG0160 PLP-dependent aminotransferases; E=2e-24 PFAM: PF00202; Aminotransferase class-III; E=1.7e-39; acetylornithine aminotransferase 4602520 argD 1794792 argD Rhodopirellula baltica SH 1 acetylornithine aminotransferase NP_868468.1 4601126 D 243090 CDS NP_868469.1 32475475 1791411 4602560..4602715 1 NC_005027.1 hypothetical protein 4602715 1791411 RB8634 Rhodopirellula baltica SH 1 hypothetical protein NP_868469.1 4602560 D 243090 CDS NP_868470.1 32475476 1796449 complement(4602649..4603914) 1 NC_005027.1 best DB hits: BLAST: pir:B69865; probable phosphoesterase (EC 3.1.-.-) ykuE - Bacillus; E=1e-16 gb:AAB08594.1; (U70214) hypothetical [Escherichia coli]; E=1e-15 pir:D64740; probable phosphoesterase (EC 3.1.-.-) yaeI - Escherichia; E=1e-15 COG: BS_ykuE; COG1408 Predicted phosphohydrolases; E=1e-17 PFAM: PF02549; DNA repair exonuclease; E=0.12; phosphoesterase ykuE 4603914 ykuE 1796449 ykuE Rhodopirellula baltica SH 1 phosphoesterase ykuE NP_868470.1 4602649 R 243090 CDS NP_868471.1 32475477 1796440 complement(4603872..4604477) 1 NC_005027.1 best DB hits: BLAST: pir:T36773; hypothetical protein SCI28.03c - Streptomyces coelicolor; E=2e-12 pir:T49094; hypothetical protein F4F15.260 - Arabidopsis thaliana; E=5e-12 swissprot:Q11043; YC76_MYCTU HYPOTHETICAL 16.5 KDA PROTEIN RV1276C; E=3e-08 COG: Rv1276c; COG2062 Phosphohistidine phosphatase SixA; E=3e-09 slr1124; COG0406 Phosphoglycerate mutase/fructose-2,6-bisphosphatase; E=0.001 Cj1002c; COG2062 Phosphohistidine phosphatase SixA; E=0.002 PFAM: PF00300; Phosphoglycerate mutase; E=0.013; phosphohistidine phosphatase 4604477 sixA 1796440 sixA Rhodopirellula baltica SH 1 phosphohistidine phosphatase NP_868471.1 4603872 R 243090 CDS NP_868472.1 32475478 1794423 4604495..4605874 1 NC_005027.1 best DB hits: BLAST: gb:AAG20856.1; (AE005154) Vng6189h [Halobacterium sp. NRC-1]; E=5e-05 pir:H69064; serinethreonine protein kinase related protein -; E=0.005 pir:C82804; conserved hypothetical protein XF0464 [imported] -; E=0.053 COG: MTH1485; COG1520 Uncharacterized proteins of WD40-like repeat family; E=5e-04 PFAM: PF01011; PQQ enzyme repeat; E=0.27; hypothetical protein 4605874 1794423 RB8639 Rhodopirellula baltica SH 1 hypothetical protein NP_868472.1 4604495 D 243090 CDS NP_868473.1 32475479 1790299 4605970..4606248 1 NC_005027.1 hypothetical protein 4606248 1790299 RB8641 Rhodopirellula baltica SH 1 hypothetical protein NP_868473.1 4605970 D 243090 CDS NP_868474.1 32475480 1790652 4606349..4606828 1 NC_005027.1 best DB hits: BLAST: gb:AAF29108.1; AF161493_1 (AF161493) HSPC144 [Homo sapiens]; E=7e-35 gb:AAG43118.1; AF059619_1 (AF059619) My005 protein [Homo sapiens]; E=7e-35 pir:C82610; conserved hypothetical protein XF2014 [imported] -; E=3e-31 COG: XF2014; COG2947 Uncharacterized BCR; E=3e-32; hypothetical protein 4606828 1790652 RB8644 Rhodopirellula baltica SH 1 hypothetical protein NP_868474.1 4606349 D 243090 CDS NP_868475.1 32475481 1792778 complement(4606868..4607347) 1 NC_005027.1 hypothetical protein 4607347 1792778 RB8646 Rhodopirellula baltica SH 1 hypothetical protein NP_868475.1 4606868 R 243090 CDS NP_868476.1 32475482 1797188 4607282..4607563 1 NC_005027.1 hypothetical protein 4607563 1797188 RB8648 Rhodopirellula baltica SH 1 hypothetical protein NP_868476.1 4607282 D 243090 CDS NP_868477.1 32475483 1790188 4607622..4608245 1 NC_005027.1 PMID: 8694762 best DB hits: BLAST: pir:T02489; peptidylprolyl isomerase (EC 5.2.1.8) F23F1.12 -; E=2e-55 pir:T50837; cyclophilin CYP5 [imported] - Arabidopsis thaliana; E=3e-55 pir:T50838; cyclophilin ROC7 [imported] - Arabidopsis thaliana; E=1e-53 COG: slr1251; COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) -; E=6e-54 PFAM: PF00160; Cyclophilin type peptidyl-proly; E=1.4e-105; peptidylprolyl isomerase 4608245 cypH 1790188 cypH Rhodopirellula baltica SH 1 peptidylprolyl isomerase NP_868477.1 4607622 D 243090 CDS NP_868478.1 32475484 1795556 4608494..4609975 1 NC_005027.1 best DB hits: BLAST: pir:S75346; hypothetical protein slr2013 - Synechocystis sp. (strain; E=2e-34 pir:D83106; hypothetical protein PA4323 [imported] - Pseudomonas; E=3e-33 ddbj:BAB04451.1; (AP001509) BH0732~unknown conserved protein in; E=9e-31 COG: slr2013; COG1721 Uncharacterized ACR; E=2e-35 PFAM: PF01882; Protein of unknown function DUF; E=5.3e-19; hypothetical protein 4609975 1795556 RB8651 Rhodopirellula baltica SH 1 hypothetical protein NP_868478.1 4608494 D 243090 CDS NP_868479.1 32475485 1795982 4609979..4610365 1 NC_005027.1 hypothetical protein 4610365 1795982 RB8652 Rhodopirellula baltica SH 1 hypothetical protein NP_868479.1 4609979 D 243090 CDS NP_868480.1 32475486 1795242 4614557..4614670 1 NC_005027.1 hypothetical protein 4614670 1795242 RB8669 Rhodopirellula baltica SH 1 hypothetical protein NP_868480.1 4614557 D 243090 CDS NP_868481.1 32475487 1792947 4614842..4614985 1 NC_005027.1 hypothetical protein 4614985 1792947 RB8670 Rhodopirellula baltica SH 1 hypothetical protein NP_868481.1 4614842 D 243090 CDS NP_868482.1 32475488 1793385 complement(4615354..4615710) 1 NC_005027.1 hypothetical protein 4615710 1793385 RB8672 Rhodopirellula baltica SH 1 hypothetical protein NP_868482.1 4615354 R 243090 CDS NP_868483.1 32475489 1796619 4615595..4617571 1 NC_005027.1 best DB hits: BLAST: pir:H71366; probable thioredoxin - syphilis spirochete ----- gb:; E=2e-11 gb:AAD00775.1; (U95250) thioredoxin [Treponema pallidum]; E=2e-11 ddbj:BAB06587.1; (AP001516) thioldisulfide interchange protein; E=7e-09 COG: TP0100; COG0526 Thiol-disulfide isomerase and thioredoxins; E=2e-12 XF2174; COG3118 Thioredoxin domain-containing protein; E=7e-07 XF1990; COG0526 Thiol-disulfide isomerase and thioredoxins; E=1e-06 PFAM: PF00085; Thioredoxin; E=0.34; thioredoxin 4617571 1796619 RB8674 Rhodopirellula baltica SH 1 thioredoxin NP_868483.1 4615595 D 243090 CDS NP_868484.1 32475490 1792253 complement(4617669..4618556) 1 NC_005027.1 best DB hits: BLAST: pir:S76850; hypothetical protein - Synechocystis sp. (strain PCC; E=0.56; hypothetical protein 4618556 1792253 RB8677 Rhodopirellula baltica SH 1 hypothetical protein NP_868484.1 4617669 R 243090 CDS NP_868485.1 32475491 1793311 complement(4618580..4620013) 1 NC_005027.1 best DB hits: BLAST: gb:AAF23289.1; AC016661_14 (AC016661) oxidoreductase; E=1e-52 gb:AAG19065.1; (AE005005) Vng0542c [Halobacterium sp. NRC-1]; E=2e-45 pir:C75327; oxidoreductase, FAD-binding - Deinococcus radiodurans; E=2e-41 COG: VNG0542C; COG1233 Phytoene dehydrogenase and related proteins; E=2e-46 PFAM: PF00070; Pyridine nucleotide-disulphide; E=0.041 PF01593; Flavin containing amine oxidase; E=2.5e-05 PF01494; FAD binding domain; E=0.0013; oxidoreductase 4620013 1793311 RB8679 Rhodopirellula baltica SH 1 oxidoreductase NP_868485.1 4618580 R 243090 CDS NP_868486.1 32475492 1790252 complement(4620010..4621476) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAA33615.1; (AB012956) unknown [Vibrio cholerae]; E=6e-99 pir:F82345; conserved hypothetical protein VC0264 [imported] -; E=9e-96 gb:AAD54657.1; AF090685_1 (AF090685) hypothetical protein [Vibrio; E=7e-67 COG: VC0264; COG1236 Predicted exonuclease of the beta-lactamase fold; E=9e-97 MJ1236; COG1782 Predicted metal-dependent RNase, consists of a; E=4e-39 MJ0162; COG1236 Predicted exonuclease of the beta-lactamase fold; E=1e-26 PFAM: PF00753; Metallo-beta-lactamase superfami; E=9.3e-07; cleavage and polyadenylation specifity factor-related protein 4621476 1790252 RB8680 Rhodopirellula baltica SH 1 cleavage and polyadenylation specifity factor-related protein NP_868486.1 4620010 R 243090 CDS NP_868487.1 32475493 1791881 4621513..4621959 1 NC_005027.1 hypothetical protein 4621959 1791881 RB8681 Rhodopirellula baltica SH 1 hypothetical protein NP_868487.1 4621513 D 243090 CDS NP_868488.1 32475494 1792054 4621902..4622102 1 NC_005027.1 hypothetical protein 4622102 1792054 RB8683 Rhodopirellula baltica SH 1 hypothetical protein NP_868488.1 4621902 D 243090 CDS NP_868489.1 32475495 1796362 4622113..4623192 1 NC_005027.1 best DB hits: BLAST: gb:AAG20046.1; (AE005084) Vng1839h [Halobacterium sp. NRC-1]; E=3e-46 embl:CAC11174.1; (AL445063) hypothetical protein [Thermoplasma; E=3e-40 pir:E72334; conserved hypothetical protein - Thermotoga maritima; E=6e-29 COG: VNG1839H; COG3367 Uncharacterized ACR; E=3e-47; hypothetical protein 4623192 1796362 RB8684 Rhodopirellula baltica SH 1 hypothetical protein NP_868489.1 4622113 D 243090 CDS NP_868490.1 32475496 1796966 4623156..4624238 1 NC_005027.1 PMID: 2583528 best DB hits: BLAST: gb:AAG20045.1; (AE005084) chloromuconate cycloisomerase; YkfB1; E=3e-38 pir:H64881; hypothetical protein b1325 - Escherichia coli -----; E=1e-24 swissprot:P51981; YCJG_ECOLI HYPOTHETICAL 34.7 KD PROTEIN IN; E=8e-24 COG: VNG1837G; COG1441 O-succinylbenzoate synthase and related enzymes; E=3e-39 PFAM: PF02746; Mandelate racemase / muconate lacton; E=0.00038 PF01188; Mandelate racemase / muconate lacton; E=9.6e-23; chloromuconate cycloisomerase YkfB1 4624238 ykfB 1796966 ykfB Rhodopirellula baltica SH 1 chloromuconate cycloisomerase YkfB1 NP_868490.1 4623156 D 243090 CDS NP_868491.1 32475497 1794235 4624297..4626705 1 NC_005027.1 best DB hits: BLAST: pir:A83422; hypothetical protein PA1797 [imported] - Pseudomonas; E=4e-34 pir:G75201; probable beta-lactamase (EC 3.5.2.6) PAB0087 -; E=3e-29 gb:AAF86053.1; AF210139_1 (AF210139) fmtA-like protein; E=4e-28 COG: PA1797; COG1680 Beta-lactamase class C and other penicillin binding; E=3e-35 ddpX; COG2173 D-alanyl-D-alanine dipeptidase; E=6e-16 Rv0399c; COG1680 Beta-lactamase class C and other penicillin binding; E=6e-14 PFAM: PF01427; D-ala-D-ala dipeptidase; E=3.1e-32; beta-lactamase 4626705 1794235 RB8687 Rhodopirellula baltica SH 1 beta-lactamase NP_868491.1 4624297 D 243090 CDS NP_868492.1 32475498 1797177 complement(4626753..4626875) 1 NC_005027.1 hypothetical protein 4626875 1797177 RB8689 Rhodopirellula baltica SH 1 hypothetical protein NP_868492.1 4626753 R 243090 CDS NP_868493.1 32475499 1792804 complement(4626859..4628703) 1 NC_005027.1 best DB hits: PFAM: PF02774; Semialdehyde dehydrogenase, d; E=0.16; hypothetical protein 4628703 1792804 RB8690 Rhodopirellula baltica SH 1 hypothetical protein NP_868493.1 4626859 R 243090 CDS NP_868494.1 32475500 1793504 complement(4628700..4629695) 1 NC_005027.1 best DB hits: BLAST: gb:AAF81232.1; (AF263012) ABC transporter ATP binding protein; E=4e-31 pir:C72303; ABC transporter ATP-binding protein - Thermotoga; E=5e-29 pir:T36523; probable ABC-type transport system ATP-binding protein -; E=1e-28 COG: TM1028; COG1131 ABC-type multidrug transport system, ATPase; E=5e-30 PFAM: PF00005; ABC transporter; E=4.5e-39; ABC transporter ATP binding protein 4629695 1793504 RB8693 Rhodopirellula baltica SH 1 ABC transporter ATP binding protein NP_868494.1 4628700 R 243090 CDS NP_868495.1 32475501 1795784 complement(4629692..4630087) 1 NC_005027.1 PMID: 7612925 best DB hits: BLAST: pir:G69999; transcriptional regulator GntR related protein ytrA -; E=7e-17 swissprot:P54590; YHCF_BACSU HYPOTHETICAL TRANSCRIPTIONAL; E=1e-11 pir:D72336; transcriptional regulator, GntR family - Thermotoga; E=5e-11 COG: BS_ytrA; COG1725 Predicted transcriptional regulators; E=7e-18 PA0268; COG1167 Transcriptional regulators containing a; E=1e-08 BH1940; COG1167 Transcriptional regulators containing a DNA-binding; E=1e-08 PFAM: PF01047; MarR family; E=0.01 PF00392; Bacterial regulatory proteins, gntR; E=5.7e-17; GntR family transcriptional regulator 4630087 1795784 RB8695 Rhodopirellula baltica SH 1 GntR family transcriptional regulator NP_868495.1 4629692 R 243090 CDS NP_868496.1 32475502 1792093 complement(4630111..4630281) 1 NC_005027.1 hypothetical protein 4630281 1792093 RB8697 Rhodopirellula baltica SH 1 hypothetical protein NP_868496.1 4630111 R 243090 CDS NP_868497.1 32475503 1792752 4630224..4630400 1 NC_005027.1 hypothetical protein 4630400 1792752 RB8700 Rhodopirellula baltica SH 1 hypothetical protein NP_868497.1 4630224 D 243090 CDS NP_868498.1 32475504 1791887 4630397..4630999 1 NC_005027.1 PMID: 99328972 best DB hits: BLAST: gb:AAD41810.1; AF144091_4 (AF144091) sigma factor SigH; E=7e-06 pir:H75550; RNA polymerase sigma-E factor - Deinococcus radiodurans; E=3e-05 swissprot:O05843; RPOE_MYCTU RNA POLYMERASE SIGMA-E FACTOR; E=8e-05 COG: DR0180; COG1595 DNA-directed RNA polymerase specialized sigma; E=3e-06 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=0.0092; sigma factor SigH 4630999 sigH 1791887 sigH Rhodopirellula baltica SH 1 sigma factor SigH NP_868498.1 4630397 D 243090 CDS NP_868499.1 32475505 1793124 4630992..4631468 1 NC_005027.1 hypothetical protein 4631468 1793124 RB8703 Rhodopirellula baltica SH 1 hypothetical protein NP_868499.1 4630992 D 243090 CDS NP_868500.1 32475506 1793802 4631375..4632673 1 NC_005027.1 hypothetical protein 4632673 1793802 RB8704 Rhodopirellula baltica SH 1 hypothetical protein NP_868500.1 4631375 D 243090 CDS NP_868501.1 32475507 1796557 4632670..4633758 1 NC_005027.1 PMID: 95369727 PMID: 1971619 best DB hits: BLAST: pir:A82078; type IV pilin biogenesis protein PilC VC2425 [imported]; E=8e-09 gb:AAB65806.1; (U17138) FimO [Dichelobacter nodosus]; E=3e-06 swissprot:P22609; PILC_PSEAE FIMBRIAL ASSEMBLY PROTEIN PILC; E=2e-05 COG: VC2425; COG1459 General secretory pathway protein F; E=7e-10 PFAM: PF00482; Bacterial type II secretion syst; E=8.1e-08; type IV pilin biogenesis protein PilC 4633758 pilC 1796557 pilC Rhodopirellula baltica SH 1 type IV pilin biogenesis protein PilC NP_868501.1 4632670 D 243090 CDS NP_868502.1 32475508 1796869 4633755..4634828 1 NC_005027.1 PMID: 8820654 best DB hits: BLAST: gb:AAC23568.1; (AF059249) type IV pilus assembly protein TapC; E=2e-04 swissprot:P45793; TAPC_AERHY TYPE IV PILUS ASSEMBLY PROTEIN TAPC; E=5e-04 pir:S77585; pilus assembly protein pilG - Neisseria gonorrhoeae; E=0.036 PFAM: PF00482; Bacterial type II secretion system; E=0.0045; type IV pilus assembly protein TapC 4634828 tapC 1796869 tapC Rhodopirellula baltica SH 1 type IV pilus assembly protein TapC NP_868502.1 4633755 D 243090 CDS NP_868503.1 32475509 1793696 4634825..4635253 1 NC_005027.1 hypothetical protein 4635253 1793696 RB8713 Rhodopirellula baltica SH 1 hypothetical protein NP_868503.1 4634825 D 243090 CDS NP_868504.1 32475510 1791150 4635250..4635789 1 NC_005027.1 hypothetical protein 4635789 1791150 RB8715 Rhodopirellula baltica SH 1 hypothetical protein NP_868504.1 4635250 D 243090 CDS NP_868505.1 32475511 1795026 4635786..4636415 1 NC_005027.1 hypothetical protein 4636415 1795026 RB8717 Rhodopirellula baltica SH 1 hypothetical protein NP_868505.1 4635786 D 243090 CDS NP_868506.1 32475512 1791921 4636447..4637355 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 4637355 1791921 RB8718 Rhodopirellula baltica SH 1 signal peptide NP_868506.1 4636447 D 243090 CDS NP_868507.1 32475513 1796010 4637352..4638119 1 NC_005027.1 hypothetical protein 4638119 1796010 RB8722 Rhodopirellula baltica SH 1 hypothetical protein NP_868507.1 4637352 D 243090 CDS NP_868508.1 32475514 1795609 4638077..4638301 1 NC_005027.1 hypothetical protein 4638301 1795609 RB8723 Rhodopirellula baltica SH 1 hypothetical protein NP_868508.1 4638077 D 243090 CDS NP_868509.1 32475515 1791473 4638301..4638465 1 NC_005027.1 PMID: 9403685 best DB hits: BLAST: swissprot:O51357; RL33_BORBU 50S RIBOSOMAL PROTEIN L33 -----; E=0.32 PFAM: PF00471; Ribosomal protein L33; E=0.00011; 50S ribosomal protein L33 4638465 rpmG 1791473 rpmG Rhodopirellula baltica SH 1 50S ribosomal protein L33 NP_868509.1 4638301 D 243090 CDS NP_868510.1 32475516 1795070 4638505..4640304 1 NC_005027.1 PMID: 1987126 PMID: 2649886 best DB hits: BLAST: ddbj:BAB04959.1; (AP001511) single-strand DNA-specific; E=5e-91 pir:H69980; single-strand DNA-specific exonuclease homolog yrvE -; E=3e-88 pir:D72062; single-stranded-DNA-specific exonuclease RecJ CP0187; E=3e-73 COG: BH1240_1; COG0608 Single-stranded DNA-specific exonuclease; E=5e-92 PFAM: PF01368; DHH family; E=3e-41 PF02272; DHHA1 domain; E=0.00061; single-strand DNA-specific exonuclease 4640304 recJ 1795070 recJ Rhodopirellula baltica SH 1 single-strand DNA-specific exonuclease NP_868510.1 4638505 D 243090 CDS NP_868511.1 32475517 1796343 4640698..4641507 1 NC_005027.1 Converts D-mannonate to D-mannuronate; D-mannonate oxidoreductase 4641507 1796343 RB8728 Rhodopirellula baltica SH 1 D-mannonate oxidoreductase NP_868511.1 4640698 D 243090 CDS NP_868512.1 32475518 1790601 4641652..4642728 1 NC_005027.1 PMID: 8157608 best DB hits: BLAST: pir:G72422; 2-keto-3-deoxygluconate kinase - Thermotoga maritima; E=1e-15 embl:CAB61818.1; (AL133236) sugar kinase [Streptomyces; E=2e-08 pir:D83362; probable 2-ketogluconate kinase PA2261 [imported] -; E=2e-06 COG: TM0067; COG0524 Sugar kinases, ribokinase; E=1e-16 PFAM: PF00294; pfkB family carbohydrate kinase; E=3.8e-10; 2-keto-3-deoxygluconate kinase 4642728 kdgK 1790601 kdgK Rhodopirellula baltica SH 1 2-keto-3-deoxygluconate kinase NP_868512.1 4641652 D 243090 CDS NP_868513.1 32475519 1790877 complement(4642725..4643033) 1 NC_005027.1 hypothetical protein 4643033 1790877 RB8734 Rhodopirellula baltica SH 1 hypothetical protein NP_868513.1 4642725 R 243090 CDS NP_868514.1 32475520 1796541 complement(4643049..4643357) 1 NC_005027.1 hypothetical protein 4643357 1796541 RB8736 Rhodopirellula baltica SH 1 hypothetical protein NP_868514.1 4643049 R 243090 CDS NP_868515.1 32475521 1796338 complement(4643329..4643880) 1 NC_005027.1 hypothetical protein 4643880 1796338 RB8738 Rhodopirellula baltica SH 1 hypothetical protein NP_868515.1 4643329 R 243090 CDS NP_868516.1 32475522 1796429 4643832..4644191 1 NC_005027.1 hypothetical protein 4644191 1796429 RB8739 Rhodopirellula baltica SH 1 hypothetical protein NP_868516.1 4643832 D 243090 CDS NP_868517.1 32475523 1791437 complement(4644150..4644689) 1 NC_005027.1 hypothetical protein 4644689 1791437 RB8740 Rhodopirellula baltica SH 1 hypothetical protein NP_868517.1 4644150 R 243090 CDS NP_868518.1 32475524 1793950 4644447..4644920 1 NC_005027.1 PMID: 2105742 PMID: 8046752 best DB hits: BLAST: ddbj:BAB05377.1; (AP001512) chorismate mutase [Bacillus; E=6e-26 gb:AAD33790.1; AF139534_1 (AF139534) chorismate mutase [Bacillus; E=5e-25 swissprot:P19080; CHMU_BACSU CHORISMATE MUTASE (CM) ----- pir:; E=1e-22; chorismate mutase 4644920 aroH 1793950 aroH Rhodopirellula baltica SH 1 chorismate mutase NP_868518.1 4644447 D 243090 CDS NP_868519.1 32475525 1792202 4644874..4645908 1 NC_005027.1 hypothetical protein 4645908 1792202 RB8742 Rhodopirellula baltica SH 1 hypothetical protein NP_868519.1 4644874 D 243090 CDS NP_868520.1 32475526 1796387 4645847..4647718 1 NC_005027.1 PMID: 2722750 best DB hits: BLAST: swissprot:P12626; ANFA_AZOVI NITROGEN FIXATION PROTEIN ANFA; E=1e-64 pir:A48291; ornithine decarboxylase inhibitor - Escherichia coli; E=7e-61 swissprot:Q06065; ATOC_ECOLI ACETOACETATE METABOLISM REGULATORY; E=7e-61 COG: atoC; COG2204 AAA superfamily ATPases with N-terminal receiver; E=7e-62 ygeV_3; COG1221 NtrC family transcriptional regulators, ATPase; E=3e-61 TP0519; COG2204 AAA superfamily ATPases with N-terminal receiver; E=8e-60 PFAM: PF00498; FHA domain; E=1.4e-16 PF00158; Sigma-54 interaction domain; E=1.6e-129 PF02001; Protein of unknown function DUF134; E=0.73; nitrogen fixation protein anfA (sigma-54 dependendent transcriptional regulator 4647718 1796387 RB8745 Rhodopirellula baltica SH 1 nitrogen fixation protein anfA (sigma-54 dependendent transcriptional regulator NP_868520.1 4645847 D 243090 CDS NP_868521.1 32475527 1793967 4647715..4648155 1 NC_005027.1 hypothetical protein 4648155 1793967 RB8746 Rhodopirellula baltica SH 1 hypothetical protein NP_868521.1 4647715 D 243090 CDS NP_868522.1 32475528 1796157 4648152..4648808 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB06229.1; (AP001515) flavoprotein [Bacillus halodurans]; E=2e-26 swissprot:P44953; DFP_HAEIN DNAPANTOTHENATE METABOLISM; E=2e-26 pir:B82982; DNApantothenate metabolism flavoprotein PA5320; E=5e-25 COG: BH2510; COG0452 Flavoprotein involved in pantothenate metabolism; E=2e-27; flavoprotein 4648808 dfp 1796157 dfp Rhodopirellula baltica SH 1 flavoprotein NP_868522.1 4648152 D 243090 CDS NP_868523.1 32475529 1796542 4648815..4649732 1 NC_005027.1 PMID: 1709162 PMID: 10545205 best DB hits: BLAST: ddbj:BAB06253.1; (AP001515) dihydroorotate dehydrogenase; E=6e-68 swissprot:P25996; PYRD_BACSU DIHYDROOROTATE DEHYDROGENASE,; E=3e-67 swissprot:P46539; PYRD_BACCL DIHYDROOROTATE DEHYDROGENASE,; E=2e-65 COG: BH2534; COG0167 Dihydroorotate dehydrogenase; E=6e-69 PFAM: PF00977; Histidine biosynthesis protein; E=0.004 PF01180; Dihydroorotate dehydrogenase; E=4.3e-82; dihydroorotate dehydrogenase 4649732 pyrD 1796542 pyrD Rhodopirellula baltica SH 1 dihydroorotate dehydrogenase NP_868523.1 4648815 D 243090 CDS NP_868524.1 32475530 1793280 complement(4649739..4649927) 1 NC_005027.1 hypothetical protein 4649927 1793280 RB8749 Rhodopirellula baltica SH 1 hypothetical protein NP_868524.1 4649739 R 243090 CDS NP_868525.1 32475531 1796077 complement(4649932..4651029) 1 NC_005027.1 signal peptide 4651029 1796077 RB8750 Rhodopirellula baltica SH 1 signal peptide NP_868525.1 4649932 R 243090 CDS NP_868526.1 32475532 1795391 complement(4651227..4652345) 1 NC_005027.1 hypothetical protein 4652345 1795391 RB8752 Rhodopirellula baltica SH 1 hypothetical protein NP_868526.1 4651227 R 243090 CDS NP_868527.1 32475533 1791661 complement(4652356..4655331) 1 NC_005027.1 PMID: 99232513 best DB hits: BLAST: gb:AAD30861.1; AF116251_4 (AF116251) BatD [Bacteroides fragilis]; E=2e-10 gb:AAD30862.1; AF116251_5 (AF116251) BatE [Bacteroides fragilis]; E=4e-04 embl:CAA76834.1; (Y17720) SPINDLY protein [Petunia x hybrida]; E=0.59 PFAM: PF00515; TPR Domain; E=4e-07; hypothetical protein 4655331 batD 1791661 batD Rhodopirellula baltica SH 1 hypothetical protein NP_868527.1 4652356 R 243090 CDS NP_868528.1 32475534 1793262 complement(4655325..4657568) 1 NC_005027.1 PMID: 99232513 best DB hits: BLAST: gb:AAD30859.1; AF116251_2 (AF116251) BatB [Bacteroides fragilis]; E=5e-25 gb:AAD30858.1; AF116251_1 (AF116251) BatA [Bacteroides fragilis]; E=8e-15 pir:E70121; hypothetical protein BB0173 - Lyme disease spirochete; E=1e-09 COG: BB0173; COG3035 Uncharacterized BCR; E=1e-10 yfbK; COG2304 Protein containing von Willebrand factor (vWF) type A; E=0.003 APE0605; COG3035 Uncharacterized BCR; E=0.006 PFAM: PF00092; von Willebrand factor type A domain; E=6e-05; BatB 4657568 batB 1793262 batB Rhodopirellula baltica SH 1 BatB NP_868528.1 4655325 R 243090 CDS NP_868529.1 32475535 1794890 complement(4657463..4658536) 1 NC_005027.1 PMID: 99232513 best DB hits: BLAST: gb:AAD30858.1; AF116251_1 (AF116251) BatA [Bacteroides fragilis]; E=3e-38 pir:E82493; conserved hypothetical protein VCA0172 [imported] -; E=8e-29 pir:B83262; hypothetical protein PA3073 [imported] - Pseudomonas; E=4e-23 COG: VCA0172; COG3035 Uncharacterized BCR; E=8e-30 PFAM: PF00092; von Willebrand factor type A do; E=0.00041; BatA 4658536 batA 1794890 batA Rhodopirellula baltica SH 1 BatA NP_868529.1 4657463 R 243090 CDS NP_868530.1 32475536 1796456 complement(4658533..4659579) 1 NC_005027.1 hypothetical protein 4659579 1796456 RB8764 Rhodopirellula baltica SH 1 hypothetical protein NP_868530.1 4658533 R 243090 CDS NP_868531.1 32475537 1795902 complement(4659576..4660451) 1 NC_005027.1 best DB hits: BLAST: pir:G70121; conserved hypothetical protein BB0175 - Lyme disease; E=7e-30 swissprot:P71761; YE80_MYCTU HYPOTHETICAL 34.3 KDA PROTEIN RV1480; E=7e-27 pir:H83261; hypothetical protein PA3071 [imported] - Pseudomonas; E=3e-26 COG: BB0175; COG1721 Uncharacterized ACR; E=7e-31 PFAM: PF01882; Protein of unknown function DUF58; E=4.2e-38; hypothetical protein 4660451 1795902 RB8767 Rhodopirellula baltica SH 1 hypothetical protein NP_868531.1 4659576 R 243090 CDS NP_868532.1 32475538 1792612 complement(4660455..4661498) 1 NC_005027.1 best DB hits: BLAST: pir:G83261; conserved hypothetical protein PA3070 [imported] -; E=9e-66 pir:H82493; MoxR-related protein VCA0175 [imported] - Vibrio; E=2e-65 pir:B70874; probable moxR protein - Mycobacterium tuberculosis; E=4e-63 COG: PA3070; COG0714 MoxR-like ATPases; E=9e-67 PFAM: PF01078; Magnesium chelatase, subunit Chl; E=1e-06; moxR-type regulator 4661498 1792612 RB8768 Rhodopirellula baltica SH 1 moxR-type regulator NP_868532.1 4660455 R 243090 CDS NP_868533.1 32475539 1794522 complement(4661775..4663367) 1 NC_005027.1 best DB hits: BLAST: gb:AAG20870.1; (AE005155) Vng6208c [Halobacterium sp. NRC-1]; E=7e-05 pir:E75514; B-cell receptor associated protein-related protein -; E=0.016 COG: DR0482; COG0330 Membrane protease subunits, stomatin/prohibitin; E=0.002; hypothetical protein 4663367 1794522 RB8770 Rhodopirellula baltica SH 1 hypothetical protein NP_868533.1 4661775 R 243090 CDS NP_868534.1 32475540 1793081 complement(4663364..4665094) 1 NC_005027.1 best DB hits: BLAST: gb:AAG20870.1; (AE005155) Vng6208c [Halobacterium sp. NRC-1]; E=3e-04 pir:E75514; B-cell receptor associated protein-related protein -; E=8e-04 pir:S75156; hypothetical protein slr1768 - Synechocystis sp. (strain; E=8e-04 COG: DR0482; COG0330 Membrane protease subunits, stomatin/prohibitin; E=8e-05; hypothetical protein 4665094 1793081 RB8773 Rhodopirellula baltica SH 1 hypothetical protein NP_868534.1 4663364 R 243090 CDS NP_868535.1 32475541 1794901 complement(4665122..4665250) 1 NC_005027.1 hypothetical protein 4665250 1794901 RB8774 Rhodopirellula baltica SH 1 hypothetical protein NP_868535.1 4665122 R 243090 CDS NP_868536.1 32475542 1795546 complement(4665252..4665497) 1 NC_005027.1 hypothetical protein 4665497 1795546 RB8775 Rhodopirellula baltica SH 1 hypothetical protein NP_868536.1 4665252 R 243090 CDS NP_868537.1 32475543 1796263 4665512..4665772 1 NC_005027.1 hypothetical protein 4665772 1796263 RB8776 Rhodopirellula baltica SH 1 hypothetical protein NP_868537.1 4665512 D 243090 CDS NP_868538.1 32475544 1797201 4665826..4667160 1 NC_005027.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 4667160 rho 1797201 rho Rhodopirellula baltica SH 1 transcription termination factor Rho NP_868538.1 4665826 D 243090 CDS NP_868539.1 32475545 1796451 4667344..4668846 1 NC_005027.1 PMID: 2504697 best DB hits: BLAST: pir:B83341; L-serine dehydratase PA2443 [imported] - Pseudomonas; E=1e-141 pir:D82974; L-serine dehydratase PA5379 [imported] - Pseudomonas; E=1e-127 swissprot:O86564; SDHL_STRCO L-SERINE DEHYDRATASE (L-SERINE; E=1e-126 COG: PA2443; COG1760 L-serine deaminase; E=1e-142; L-serine dehydratase 4668846 sdaA 1796451 sdaA Rhodopirellula baltica SH 1 L-serine dehydratase NP_868539.1 4667344 D 243090 CDS NP_868540.1 32475546 1794987 complement(4668909..4669028) 1 NC_005027.1 hypothetical protein 4669028 1794987 RB8780 Rhodopirellula baltica SH 1 hypothetical protein NP_868540.1 4668909 R 243090 CDS NP_868541.1 32475547 1795962 4669001..4670116 1 NC_005027.1 best DB hits: BLAST: embl:CAC14937.1; (AL449216) oxidoreductase [Streptomyces; E=8e-20 swissprot:P49305; YMO1_RHIME HYPOTHETICAL 36.4 KD PROTEIN IN; E=1e-12 ddbj:BAB04429.1; (AP001509) BH0710~unknown conserved protein; E=3e-11 COG: BH0710; COG0673 Predicted dehydrogenases and related proteins; E=3e-12 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=2.3e-26; NADH-dependent oxidoreductase 4670116 1795962 RB8781 Rhodopirellula baltica SH 1 NADH-dependent oxidoreductase NP_868541.1 4669001 D 243090 CDS NP_868542.1 32475548 1790020 complement(4670203..4671168) 1 NC_005027.1 best DB hits: BLAST: pir:T48821; hypothetical protein 68B2.50 [imported] - Neurospora; E=7e-21 pir:T37061; probable secreted protein - Streptomyces coelicolor; E=1e-05 pir:S71925; angel protein - fruit fly (Drosophila melanogaster); E=0.001; hypothetical protein 4671168 1790020 RB8783 Rhodopirellula baltica SH 1 hypothetical protein NP_868542.1 4670203 R 243090 CDS NP_868543.1 32475549 1792331 complement(4671165..4672793) 1 NC_005027.1 best DB hits: BLAST: pir:H72393; hypothetical protein TM0307 - Thermotoga maritima; E=3e-12 COG: TM0307; COG2407 L-fucose isomerase and related proteins; E=3e-13; L-fucose isomerase 4672793 fucI 1792331 fucI Rhodopirellula baltica SH 1 L-fucose isomerase NP_868543.1 4671165 R 243090 CDS NP_868544.1 32475550 1797149 complement(4672814..4674508) 1 NC_005027.1 catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; ribulokinase 4674508 araB 1797149 araB Rhodopirellula baltica SH 1 ribulokinase NP_868544.1 4672814 R 243090 CDS NP_868545.1 32475551 1795704 complement(4674623..4677007) 1 NC_005027.1 best DB hits: BLAST: pir:T35497; hypothetical protein SC6E10.10 - Streptomyces coelicolor; E=0.14 gb:AAG54838.1; AE005229_1 (AE005229) RTX family exoprotein; E=0.87; hypothetical protein 4677007 1795704 RB8789 Rhodopirellula baltica SH 1 hypothetical protein NP_868545.1 4674623 R 243090 CDS NP_868546.1 32475552 1792620 complement(4677023..4678378) 1 NC_005027.1 best DB hits: BLAST: swissprot:P31455; YIDR_ECOLI HYPOTHETICAL 46.4 KD PROTEIN IN; E=5e-86 gb:AAA62041.1; (L10328) f416 [Escherichia coli]; E=3e-85 gb:AAG58891.1; AE005600_9 (AE005600) orf, hypothetical protein; E=3e-85 COG: RP302; COG0823 Periplasmic component of the Tol biopolymer transport; E=0.004 PFAM: PF02039; Adrenomedullin; E=0.72; hypothetical protein 4678378 yidR 1792620 yidR Rhodopirellula baltica SH 1 hypothetical protein NP_868546.1 4677023 R 243090 CDS NP_868547.1 32475553 1791319 4678582..4679277 1 NC_005027.1 best DB hits: BLAST: pir:T36491; probable gntR-family transcriptional regulator -; E=1e-12 pir:T34672; probable gntR family transcriptional regulator -; E=2e-10 pir:B83545; probable transcriptional regulator PA0797 [imported] -; E=3e-10 COG: PA0797; COG1802 Transcriptional regulators; E=3e-11 DR1905; COG2186 Transcriptional regulators; E=2e-07 VC1335; COG1802 Transcriptional regulators; E=2e-07 PFAM: PF00392; Bacterial regulatory proteins, gntR; E=3.7e-09; GntR family transcriptional regulator 4679277 1791319 RB8796 Rhodopirellula baltica SH 1 GntR family transcriptional regulator NP_868547.1 4678582 D 243090 CDS NP_868548.1 32475554 1794611 complement(4679244..4680872) 1 NC_005027.1 PMID: 9329364 best DB hits: BLAST: pir:S75887; hypothetical protein - Synechocystis sp. (strain PCC; E=3e-31 embl:CAC16517.1; (AL450223) integral membrane transport; E=1e-27 gb:AAF57192.1; (AE003779) CG2187 gene product [Drosophila; E=6e-27 COG: sll1087; COG0591 Na+/proline, Na+/panthothenate symporters and; E=3e-32 yidK; COG0591 Na+/proline, Na+/panthothenate symporters and related; E=3e-06 PAB0609; COG0591 Na+/proline, Na+/panthothenate symporters and; E=1e-04 PFAM: PF00474; Sodium:solute symporter family; E=1.5e-11; sodium iodide symporter 4680872 1794611 RB8797 Rhodopirellula baltica SH 1 sodium iodide symporter NP_868548.1 4679244 R 243090 CDS NP_868549.1 32475555 1796434 complement(4680869..4681828) 1 NC_005027.1 PMID: 8098035 best DB hits: BLAST: gb:AAG18989.1; (AE004999) dihydrodipicolinate synthase; DapA; E=2e-23 swissprot:P75682; YAGE_ECOLI HYPOTHETICAL 33.3 KD PROTEIN IN; E=6e-19 pir:S56523; dihydrodipicolinate synthase homolog yjhH - Escherichia; E=1e-18 COG: VNG0444G; COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate; E=2e-24 PFAM: PF00701; Dihydrodipicolinate synthetase famil; E=1.6e-46; dihydrodipicolinate synthase DapA 4681828 dapA 1796434 dapA Rhodopirellula baltica SH 1 dihydrodipicolinate synthase DapA NP_868549.1 4680869 R 243090 CDS NP_868550.1 32475556 1796074 complement(4681977..4683413) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=6e-11 ddbj:BAB05884.1; (AP001514) BH2165~unknown conserved protein; E=7e-11 pir:T34927; probable oxidoreductase - Streptomyces coelicolor; E=8e-11 COG: BH1248; COG0673 Predicted dehydrogenases and related proteins; E=6e-12 PFAM: PF01408; Oxidoreductase, NAD-bin; E=9.9e-20; NADH-dependent dyhydrogenase 4683413 1796074 RB8799 Rhodopirellula baltica SH 1 NADH-dependent dyhydrogenase NP_868550.1 4681977 R 243090 CDS NP_868551.1 32475557 1791377 complement(4683497..4684438) 1 NC_005027.1 hypothetical protein 4684438 1791377 RB8803 Rhodopirellula baltica SH 1 hypothetical protein NP_868551.1 4683497 R 243090 CDS NP_868552.1 32475558 1795973 4684515..4685042 1 NC_005027.1 best DB hits: BLAST: embl:CAC12079.1; (AL445066) conserved hypothetical protein; E=2e-11 swissprot:Q58668; YC72_METJA HYPOTHETICAL PROTEIN MJ1272 -----; E=1e-10 swissprot:O27296; YC28_METTH HYPOTHETICAL PROTEIN MTH1228 -----; E=2e-10 COG: Ta0950; COG0720 6-pyruvoyl-tetrahydropterin synthase; E=1e-12 PFAM: PF01242; 6-pyruvoyl tetrahydropterin synthas; E=0.0016 PF01945; Domain of unknown function; E=0.87; 6-pyruvoyl tetrahydrobiopterin synthase 4685042 1795973 RB8806 Rhodopirellula baltica SH 1 6-pyruvoyl tetrahydrobiopterin synthase NP_868552.1 4684515 D 243090 CDS NP_868553.1 32475559 1791041 complement(4685078..4686313) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB05084.1; (AP001511) BH1365~unknown conserved protein in; E=1e-17 pir:G81831; probable integral membrane protein NMA2020 [imported] -; E=1e-16 pir:F81195; conserved hypothetical protein NMB0465 [imported] -; E=1e-16 COG: BH1365; COG2928 Uncharacterized BCR; E=1e-18; hypothetical protein 4686313 1791041 RB8807 Rhodopirellula baltica SH 1 hypothetical protein NP_868553.1 4685078 R 243090 CDS NP_868554.1 32475560 1795181 complement(4686310..4687218) 1 NC_005027.1 best DB hits: BLAST: pir:D83584; probable phosphoribosyl transferase PA0489 [imported] -; E=1e-05 gb:AAD29646.1; AF124757_6 (AF124757) competence protein F; E=2e-05 pir:H82042; ComF-related protein VC2719 [imported] - Vibrio cholerae; E=0.50 COG: PA0489; COG1040 Predicted amidophosphoribosyltransferases; E=1e-06 PFAM: PF00156; Phosphoribosyl transferase domai; E=0.00076; phosphoribosyl transferase 4687218 1795181 RB8812 Rhodopirellula baltica SH 1 phosphoribosyl transferase NP_868554.1 4686310 R 243090 CDS NP_868555.1 32475561 1792088 4687305..4687445 1 NC_005027.1 hypothetical protein 4687445 1792088 RB8813 Rhodopirellula baltica SH 1 hypothetical protein NP_868555.1 4687305 D 243090 CDS NP_868556.1 32475562 1793713 4687433..4687669 1 NC_005027.1 hypothetical protein 4687669 1793713 RB8814 Rhodopirellula baltica SH 1 hypothetical protein NP_868556.1 4687433 D 243090 CDS NP_868557.1 32475563 1796551 complement(4687740..4687955) 1 NC_005027.1 hypothetical protein 4687955 1796551 RB8815 Rhodopirellula baltica SH 1 hypothetical protein NP_868557.1 4687740 R 243090 CDS NP_868558.1 32475564 1794112 4688029..4688784 1 NC_005027.1 PMID: 8432708 PMID: 7961421 best DB hits: BLAST: swissprot:Q45585; SIGW_BACSU RNA POLYMERASE SIGMA FACTOR SIGW; E=1e-15 ddbj:BAB03982.1; (AP001507) RNA polymerase ECF-type sigma factor; E=5e-13 gb:AAF18265.1; U22895_1 (U22895) alternative sigma factor AlgU; E=3e-10 COG: BS_sigW; COG1595 DNA-directed RNA polymerase specialized sigma; E=1e-16 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=2.9e-11; RNA polymerase sigma factor sigW 4688784 sigW 1794112 sigW Rhodopirellula baltica SH 1 RNA polymerase sigma factor sigW NP_868558.1 4688029 D 243090 CDS NP_868559.1 32475565 1790725 complement(4688839..4689021) 1 NC_005027.1 hypothetical protein 4689021 1790725 RB8818 Rhodopirellula baltica SH 1 hypothetical protein NP_868559.1 4688839 R 243090 CDS NP_868560.1 32475566 1790247 complement(4689011..4689157) 1 NC_005027.1 hypothetical protein 4689157 1790247 RB8819 Rhodopirellula baltica SH 1 hypothetical protein NP_868560.1 4689011 R 243090 CDS NP_868561.1 32475567 1794482 4689239..4690069 1 NC_005027.1 best DB hits: BLAST: pir:S75136; sensory transduction histidine kinase slr2104 -; E=5e-05 swissprot:P39663; SPHR_SYNP7 ALKALINE PHOSPHATASE SYNTHESIS; E=8e-05 ddbj:BAB09274.1; (AB011485) histidine kinase-like protein; E=1e-04 COG: slr2104_4; COG0784 CheY-like receiver domains; E=4e-06 VC0719; COG0745 Response regulators consisting of a CheY-like; E=2e-05 slr1042; COG0784 CheY-like receiver domains; E=5e-05 PFAM: PF02599; Carbon storage regulator; E=0.2 PF00072; Response regulator receiver d; E=1.7e-10; sensory transduction histidine kinase 4690069 1794482 RB8820 Rhodopirellula baltica SH 1 sensory transduction histidine kinase NP_868561.1 4689239 D 243090 CDS NP_868562.1 32475568 1797042 4690159..4690344 1 NC_005027.1 hypothetical protein 4690344 1797042 RB8821 Rhodopirellula baltica SH 1 hypothetical protein NP_868562.1 4690159 D 243090 CDS NP_868563.1 32475569 1795661 complement(4690285..4691280) 1 NC_005027.1 PMID: 3139632 PMID: 7664125 best DB hits: BLAST: swissprot:Q10614; YC88_MYCTU HYPOTHETICAL 49.6 KDA PROTEIN RV1288; E=2e-08 pir:S58235; endo-1,4-beta-xylanase (EC 3.2.1.8) 1 precursor -; E=2e-07 embl:CAB93667.1; (AJ272430) endoxylanase [Ruminococcus; E=4e-07 COG: yieL; COG2382 Enterochelin esterase and related enzymes; E=0.001; endo-1,4-beta-xylanase 1 precursor 4691280 xynE 1795661 xynE Rhodopirellula baltica SH 1 endo-1,4-beta-xylanase 1 precursor NP_868563.1 4690285 R 243090 CDS NP_868564.1 32475570 1795000 4691280..4691843 1 NC_005027.1 PMID: 9000374 best DB hits: BLAST: swissprot:P78594; FCA1_CANAL CYTOSINE DEAMINASE (CYTOSINE; E=9e-32 gb:AAC13409.1; (U55193) cytosine deaminase [Saccharomyces; E=8e-30 gb:AAG33626.1; AF312392_1 (AF312392) cytosine deaminase-uracil; E=8e-30 COG: YPR062w; COG0590 Cytosine/adenosine deaminases; E=8e-31 PFAM: PF00383; Cytidine and deoxycytidylate de; E=6.1e-24; cytosine deaminase 4691843 1795000 RB8824 Rhodopirellula baltica SH 1 cytosine deaminase NP_868564.1 4691280 D 243090 CDS NP_868565.1 32475571 1791784 complement(4691834..4692952) 1 NC_005027.1 PMID: 8445726 best DB hits: BLAST: ddbj:BAA92557.1; (AB037740) KIAA1319 protein [Homo sapiens]; E=0.030 gb:AAF74498.1; AF263462_1 (AF263462) cingulin [Homo sapiens]; E=0.030 embl:CAC14945.1; (AL132825) dJ756N5.1 (Myosin heavy chain protein; E=0.047; transmembrane protein 4692952 1791784 RB8825 Rhodopirellula baltica SH 1 transmembrane protein NP_868565.1 4691834 R 243090 CDS NP_868566.1 32475572 1791628 complement(4693062..4694819) 1 NC_005027.1 best DB hits: BLAST: pir:H69086; ABC transporter - Methanobacterium thermoautotrophicum; E=3e-56 swissprot:Q46189; YHG1_CLOPA HYPOTHETICAL PROTEIN IN HYDROGENASE 1; E=3e-52 ddbj:BAB06427.1; (AP001516) ABC transporter [Bacillus halodurans]; E=3e-51 COG: MTH1645; COG0661 Predicted unusual protein kinase; E=3e-57; ABC transporter 4694819 1791628 RB8827 Rhodopirellula baltica SH 1 ABC transporter NP_868566.1 4693062 R 243090 CDS NP_868567.1 32475573 1793129 4694777..4696435 1 NC_005027.1 PMID: 8590279 best DB hits: BLAST: swissprot:P55660; Y4TF_RHISN PROBABLE AMINO-ACID ABC TRANSPORTER; E=0.095; amino-acid ABC transporter permease Y4TF 4696435 1793129 RB8828 Rhodopirellula baltica SH 1 amino-acid ABC transporter permease Y4TF NP_868567.1 4694777 D 243090 CDS NP_868568.1 32475574 1794339 4696475..4697428 1 NC_005027.1 best DB hits: BLAST: embl:CAA86969.1; (Z46881) unknown [Saccharomyces cerevisiae]; E=0.22 PFAM: PF02535; ZIP Zinc transporter; E=0.23; hypothetical protein 4697428 1794339 RB8833 Rhodopirellula baltica SH 1 hypothetical protein NP_868568.1 4696475 D 243090 CDS NP_868569.1 32475575 1790698 4697452..4698447 1 NC_005027.1 PMID: 2678100 best DB hits: BLAST: pir:G72363; cation efflux system protein - Thermotoga maritima; E=4e-37 pir:H71078; probable cation efflux system protein czcD - Pyrococcus; E=4e-37 pir:C83595; probable cation efflux system protein PA0397 [imported]; E=9e-37 COG: TM0538; COG1230 Co/Zn/Cd efflux system component; E=4e-38 Rv2025c; COG0053 Predicted Co/Zn/Cd cation transporters; E=2e-10 PA1297; COG1230 Co/Zn/Cd efflux system component; E=4e-10 PFAM: PF01545; Cation efflux family; E=1.7e-65; cation efflux system protein 4698447 czcD 1790698 czcD Rhodopirellula baltica SH 1 cation efflux system protein NP_868569.1 4697452 D 243090 CDS NP_868570.1 32475576 1795761 4698524..4700386 1 NC_005027.1 best DB hits: BLAST: embl:CAB99170.1; (AL390188) secreted alkaline; E=0.003 embl:CAC18240.1; (AL451018) conserved hypothetical protein; E=0.004 ddbj:BAA06483.1; (D30808) unknown [Bacillus subtilis]; E=0.10 PFAM: PF02908; Purple acid phosphatase, N-term; E=0.89 PF00041; Fibronectin type III domain; E=0.42; secreted alkaline phosphatase (fragment) 4700386 1795761 RB8835 Rhodopirellula baltica SH 1 secreted alkaline phosphatase (fragment) NP_868570.1 4698524 D 243090 CDS NP_868571.1 32475577 1794504 complement(4700391..4701458) 1 NC_005027.1 best DB hits: BLAST: pir:T09933; nucleotide pyrophosphatase homolog T16L4.210 -; E=5e-04 pir:T33724; hypothetical protein - Zymomonas mobilis ----- gb:; E=0.001 pir:B82537; phosphodiesterase-nucleotide pyrophosphatase precursor; E=0.019 PFAM: PF01676; Metalloenzyme superfamily; E=0.0082; nucleotide pyrophosphatase-like protein 4701458 1794504 RB8838 Rhodopirellula baltica SH 1 nucleotide pyrophosphatase-like protein NP_868571.1 4700391 R 243090 CDS NP_868572.1 32475578 1793033 4701445..4701729 1 NC_005027.1 PMID: 9395090 best DB hits: BLAST: pir:G72240; hypothetical protein TM1564 - Thermotoga maritima; E=3e-04 embl:CAA58988.1; (X84195) acylphosphatase [Homo sapiens]; E=9e-04 swissprot:P00818; ACYM_HORSE ACYLPHOSPHATASE, MUSCLE TYPE; E=0.001 COG: TM1564; COG1254 Acylphosphatases; E=3e-05 PFAM: PF00708; Acylphosphatase; E=0.02; acylphosphatase 4701729 1793033 RB8840 Rhodopirellula baltica SH 1 acylphosphatase NP_868572.1 4701445 D 243090 CDS NP_868573.1 32475579 1791260 complement(4701844..4704855) 1 NC_005027.1 PMID: 2987847 best DB hits: BLAST: swissprot:P05653; GYRA_BACSU DNA GYRASE SUBUNIT A ----- pir:; E=0.0 swissprot:P48372; GYRA_PSEAE DNA GYRASE SUBUNIT A ----- pir:; E=0.0 gb:AAC34892.1; (AF085683) DNA gyrase A subunit [Methylovorus sp.; E=0.0 COG: BS_gyrA; COG0188 DNA gyrase (topoisomerase II) A subunit; E=0.0 PFAM: PF00521; DNA gyrase/topoisomerase IV, su; E=1.3e-246; DNA gyrase subunit A 4704855 gyrA 1791260 gyrA Rhodopirellula baltica SH 1 DNA gyrase subunit A NP_868573.1 4701844 R 243090 CDS NP_868574.1 32475580 1793103 4705018..4706850 1 NC_005027.1 best DB hits: BLAST: embl:CAA72104.1; (Y11218) stage V sporulation protein K [Bacillus; E=1e-49 swissprot:O69733; Y2G8_MYCTU HYPOTHETICAL 62.4 KDA PROTEIN RV3868; E=1e-49 embl:CAB96009.1; (AL360055) hypothetical protein [Streptomyces; E=2e-49 COG: Rv3868; COG0464 ATPases of the AAA+ class; E=1e-50 slr0156; COG0542 ATPases with chaperone activity, ATP-binding domain; E=7e-05 AF0477; COG0464 ATPases of the AAA+ class; E=0.006 PFAM: PF00004; ATPase associated with va; E=8.9e-22; stage V sporulation protein K 4706850 1793103 RB8843 Rhodopirellula baltica SH 1 stage V sporulation protein K NP_868574.1 4705018 D 243090 CDS NP_868575.1 32475581 1795404 complement(4706923..4707834) 1 NC_005027.1 hypothetical protein 4707834 1795404 RB8846 Rhodopirellula baltica SH 1 hypothetical protein NP_868575.1 4706923 R 243090 CDS NP_868576.1 32475582 1791322 complement(4707844..4708572) 1 NC_005027.1 best DB hits: BLAST: gb:AAK03770.1; (AE006205) UbiE [Pasteurella multocida]; E=0.011 embl:CAB86120.1; (AL163003) spermidine synthase; E=0.050 pir:G83392; hypothetical protein PA2034 [imported] - Pseudomonas; E=0.098; ubiquinone/menaquinone biosynthesis methyltransferase UbiE 4708572 ubiE 1791322 ubiE Rhodopirellula baltica SH 1 ubiquinone/menaquinone biosynthesis methyltransferase UbiE NP_868576.1 4707844 R 243090 CDS NP_868577.1 32475583 1795934 complement(4708527..4709513) 1 NC_005027.1 hypothetical protein 4709513 1795934 RB8849 Rhodopirellula baltica SH 1 hypothetical protein NP_868577.1 4708527 R 243090 CDS NP_868578.1 32475584 1797156 complement(4709464..4710327) 1 NC_005027.1 PMID: 8550403 best DB hits: BLAST: embl:CAC24092.1; (AL512982) hypothetical [Sulfolobus; E=1e-48 embl:CAB55723.1; (AL117387) hypothetical protein SCF41.20c; E=3e-18 pir:T45421; probable 2-hydroxyhepta-2,4-diene-1,7- dioate isomaerase; E=1e-10 COG: Rv2993c; COG0179 2-keto-4-pentenoate; E=2e-11 PFAM: PF01557; Fumarylacetoacetate (FAA) hydro; E=0.0074; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 4710327 hpaG 1797156 hpaG Rhodopirellula baltica SH 1 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase NP_868578.1 4709464 R 243090 CDS NP_868579.1 32475585 1796774 complement(4710412..4711515) 1 NC_005027.1 PMID: 8108524 best DB hits: BLAST: pir:C75587; probable chalcone synthase - Deinococcus radiodurans; E=5e-46 pir:A75315; probable chalcone synthase - Deinococcus radiodurans; E=3e-35 gb:AAD43969.1; AF121274_1 (AF121274) chalcone synthase; E=1e-33 COG: DRA0326; COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III; E=5e-47 PFAM: PF00195; Chalcone and stilbene synthas; E=1.3e-28 PF02797; Chalcone and stilbene synthas; E=2.9e-25; chalcone synthase 4711515 chsA 1796774 chsA Rhodopirellula baltica SH 1 chalcone synthase NP_868579.1 4710412 R 243090 CDS NP_868580.1 32475586 1792314 complement(4711512..4712861) 1 NC_005027.1 best DB hits: BLAST: pir:D70549; hypothetical protein Rv0561c - Mycobacterium; E=0.12 PFAM: PF02737; 3-hydroxyacyl-CoA dehydrogenase; E=0.26 PF01494; FAD binding domain; E=0.039 PF00070; Pyridine nucleotide-disulphide; E=2.9e-09; FAD-containing oxidoreductase 4712861 1792314 RB8854 Rhodopirellula baltica SH 1 FAD-containing oxidoreductase NP_868580.1 4711512 R 243090 CDS NP_868581.1 32475587 1795568 complement(4712858..4713613) 1 NC_005027.1 best DB hits: BLAST: pir:D75587; hypothetical protein - Deinococcus radiodurans (strain; E=5e-04 pir:F75277; ubiquinonemenaquinone biosynthesis methyltransferase -; E=0.11 COG: DRA0327; COG0500 SAM-dependent methyltransferases; E=5e-05; hypothetical protein 4713613 1795568 RB8857 Rhodopirellula baltica SH 1 hypothetical protein NP_868581.1 4712858 R 243090 CDS NP_868582.1 32475588 1791660 complement(4713610..4714608) 1 NC_005027.1 Catalyzes the reduction of sulfopyruvate to (R)-sulfolactate much more efficiently than the reverse reaction. Also catalyzes the reduction of oxaloacetate, alpha-ketoglutarate, and to a much lower extent, KHTCA, but not pyruvate. Involved in the biosynthes; D-lactate dehydrogenase 4714608 ldhA 1791660 ldhA Rhodopirellula baltica SH 1 D-lactate dehydrogenase NP_868582.1 4713610 R 243090 CDS NP_868583.1 32475589 1795106 complement(4714690..4716168) 1 NC_005027.1 PMID: 7896715 best DB hits: BLAST: swissprot:P72846; LGT_SYNY3 PROBABLE PROLIPOPROTEIN DIACYLGLYCERYL; E=4e-07 pir:G70324; prolipoprotein diacylglyceryl transferase - Aquifex; E=3e-06 pir:D75473; prolipoprotein diacylglyceryl transferase - Deinococcus; E=8e-06 COG: sll1187; COG0682 Prolipoprotein diacylglyceryltransferase; E=4e-08 PFAM: PF01790; Prolipoprotein diacylglyceryl transf; E=7e-23; prolipoprotein diacylglyceryl transferase 4716168 lgt 1795106 lgt Rhodopirellula baltica SH 1 prolipoprotein diacylglyceryl transferase NP_868583.1 4714690 R 243090 CDS NP_868584.1 32475590 1790155 complement(4716340..4716639) 1 NC_005027.1 signal peptide 4716639 1790155 RB8863 Rhodopirellula baltica SH 1 signal peptide NP_868584.1 4716340 R 243090 CDS NP_868585.1 32475591 1795640 4716455..4716658 1 NC_005027.1 signal peptide 4716658 1795640 RB8864 Rhodopirellula baltica SH 1 signal peptide NP_868585.1 4716455 D 243090 CDS NP_868586.1 32475592 1791658 complement(4716709..4716891) 1 NC_005027.1 hypothetical protein 4716891 1791658 RB8865 Rhodopirellula baltica SH 1 hypothetical protein NP_868586.1 4716709 R 243090 CDS NP_868587.1 32475593 1797200 4716964..4718301 1 NC_005027.1 best DB hits: BLAST: pir:T44513; hypothetical protein 5P [imported] - Plesiomonas; E=3e-21 gb:AAG17422.1; AF285971_6 (AF285971) WbgV [Shigella sonnei]; E=4e-21 gb:AAA84874.1; (U34305) ORF6; Method: conceptual translation; E=4e-14; hypothetical protein 4718301 1797200 RB8866 Rhodopirellula baltica SH 1 hypothetical protein NP_868587.1 4716964 D 243090 CDS NP_868588.1 32475594 1792732 4718340..4719470 1 NC_005027.1 best DB hits: BLAST: swissprot:Q9RVM9; MRP_DEIRA MRP PROTEIN HOMOLOG ----- pir:; E=1e-60 pir:B82576; polysaccharide export protein XF2301 [imported] -; E=3e-56 pir:A64114; probable ATPase mrp - Haemophilus influenzae (strain Rd; E=2e-53 COG: XF2301; COG0489 ATPases involved in chromosome partitioning; E=3e-57 PFAM: PF02374; Anion-transporting ATPase; E=0.097 PF01209; ubiE/COQ5 methyltransferase f; E=0.6 PF00991; ParA family ATPase; E=0.041; Mrp protein homolog- chromosome partitioning ATPase 4719470 1792732 RB8870 Rhodopirellula baltica SH 1 Mrp protein homolog- chromosome partitioning ATPase NP_868588.1 4718340 D 243090 CDS NP_868589.1 32475595 1796356 4719525..4720280 1 NC_005027.1 PMID: 8759840 best DB hits: BLAST: pir:H75014; 3-oxoacyl-[acyl-carrier-protein] reductase PAB1085 -; E=6e-34 swissprot:P16543; DHK2_STRVN GRANATICIN POLYKETIDE SYNTHASE; E=9e-33 gb:AAC44307.1; (U59433) 3-ketoacyl-acyl carrier protein reductase; E=2e-30 COG: PAB1085; COG1028 Dehydrogenases with different specificities; E=6e-35 BH2491; COG1028 Dehydrogenases with different specificities (related; E=3e-31 BS_fabG; COG1028 Dehydrogenases with different specificities; E=3e-31 PFAM: PF00106; short chain dehydrogenase; E=1.1e-62; 3-oxoacyl-ACP reductase 4720280 fabG 1796356 fabG Rhodopirellula baltica SH 1 3-oxoacyl-ACP reductase NP_868589.1 4719525 D 243090 CDS NP_868590.1 32475596 1792765 4720343..4721158 1 NC_005027.1 PMID: 8436953 best DB hits: BLAST: swissprot:Q9X1E3; GLPF_THEMA PROBABLE GLYCEROL UPTAKE FACILITATOR; E=3e-37 swissprot:P18156; GLPF_BACSU GLYCEROL UPTAKE FACILITATOR PROTEIN; E=4e-33 ddbj:BAB04811.1; (AP001510) glycerol uptake facilitator [Bacillus; E=5e-33 COG: TM1429; COG0580 Glycerol uptake facilitator and related permeases; E=3e-38 PFAM: PF00230; Major intrinsic protein; E=6.1e-57; glycerol uptake facilitator protein 4721158 glpF 1792765 glpF Rhodopirellula baltica SH 1 glycerol uptake facilitator protein NP_868590.1 4720343 D 243090 CDS NP_868591.1 32475597 1796038 complement(4721200..4723605) 1 NC_005027.1 PMID: 7984107 best DB hits: BLAST: pir:S75136; sensory transduction histidine kinase slr2104 -; E=2e-56 pir:S75525; sensory transduction histidine kinase sll1228 -; E=4e-50 pir:E82198; sensor histidine kinaseresponse regulator VC1445; E=5e-46 COG: VC1349_2; COG0642 Sensory transduction histidine kinases; E=2e-43 PFAM: PF00785; PAC motif; E=0.00017 PF00512; His Kinase A (phosphoacceptor; E=1.1e-25 PF02518; Histidine kinase-, DNA gyrase; E=8.9e-44; sensory transduction histidine kinase 4723605 1796038 RB8873 Rhodopirellula baltica SH 1 sensory transduction histidine kinase NP_868591.1 4721200 R 243090 CDS NP_868592.1 32475598 1792929 4723629..4723892 1 NC_005027.1 hypothetical protein 4723892 1792929 RB8876 Rhodopirellula baltica SH 1 hypothetical protein NP_868592.1 4723629 D 243090 CDS NP_868593.1 32475599 1793586 complement(4723713..4723982) 1 NC_005027.1 hypothetical protein 4723982 1793586 RB8877 Rhodopirellula baltica SH 1 hypothetical protein NP_868593.1 4723713 R 243090 CDS NP_868594.1 32475600 1790072 4724071..4725009 1 NC_005027.1 best DB hits: BLAST: gb:AAK05448.1; AE006367_4 (AE006367) HYPOTHETICAL PROTEIN; E=3e-10 pir:C69789; hypothetical protein ydjG - Bacillus subtilis -----; E=3e-09 ddbj:BAB05525.1; (AP001513) BH1806~unknown conserved protein; E=5e-09; hypothetical protein 4725009 yniI 1790072 yniI Rhodopirellula baltica SH 1 hypothetical protein NP_868594.1 4724071 D 243090 CDS NP_868595.1 32475601 1796193 4724951..4725979 1 NC_005027.1 best DB hits: BLAST: pir:C69789; hypothetical protein ydjG - Bacillus subtilis -----; E=2e-07 embl:CAA76859.1; (Y17797) hypothetical protein [Enterococcus; E=2e-07 gb:AAK05448.1; AE006367_4 (AE006367) HYPOTHETICAL PROTEIN; E=8e-04; hypothetical protein 4725979 ydjG 1796193 ydjG Rhodopirellula baltica SH 1 hypothetical protein NP_868595.1 4724951 D 243090 CDS NP_868596.1 32475602 1795233 complement(4726013..4726480) 1 NC_005027.1 hypothetical protein 4726480 1795233 RB8881 Rhodopirellula baltica SH 1 hypothetical protein NP_868596.1 4726013 R 243090 CDS NP_868597.1 32475603 1794531 complement(4726461..4727510) 1 NC_005027.1 PMID: 1906968 best DB hits: BLAST: pir:S22102; fimbrial protein MS11-C3MS11-G2 precursor - Neisseria; E=0.57 pir:S22103; fimbrial protein MS11-E1MS11-F3 precursor - Neisseria; E=0.57 pir:S22104; fimbrial protein MS11-E3 precursor - Neisseria; E=0.57 PFAM: PF00114; Pilin (bacterial filament); E=0.42; fimbrial protein MS11-C3/MS11-G2 precursor 4727510 pilE1 1794531 pilE1 Rhodopirellula baltica SH 1 fimbrial protein MS11-C3/MS11-G2 precursor NP_868597.1 4726461 R 243090 CDS NP_868598.1 32475604 1796606 4727666..4727878 1 NC_005027.1 hypothetical protein 4727878 1796606 RB8884 Rhodopirellula baltica SH 1 hypothetical protein NP_868598.1 4727666 D 243090 CDS NP_868599.1 32475605 1793794 complement(4727875..4729392) 1 NC_005027.1 best DB hits: BLAST: pir:T34690; hypothetical protein SC1B5.12c SC1B5.12c - Streptomyces; E=2e-63 ddbj:BAB07623.1; (AP001520) BH3904~unknown conserved protein in; E=7e-54 pir:T36920; hypothetical protein SCI7.24c - Streptomyces coelicolor; E=4e-48 COG: BH3904; COG3211 Predicted phosphatase; E=7e-55; phosphatase 4729392 1793794 RB8885 Rhodopirellula baltica SH 1 phosphatase NP_868599.1 4727875 R 243090 CDS NP_868600.1 32475606 1795677 complement(4729323..4729475) 1 NC_005027.1 hypothetical protein 4729475 1795677 RB8886 Rhodopirellula baltica SH 1 hypothetical protein NP_868600.1 4729323 R 243090 CDS NP_868601.1 32475607 1793443 complement(4729500..4729718) 1 NC_005027.1 hypothetical protein 4729718 1793443 RB8888 Rhodopirellula baltica SH 1 hypothetical protein NP_868601.1 4729500 R 243090 CDS NP_868602.1 32475608 1794345 4729717..4731300 1 NC_005027.1 PMID: 8760916 PMID: 25878 best DB hits: BLAST: swissprot:P42251; PPBD_BACSU ALKALINE PHOSPHATASE D PRECURSOR; E=1e-124 ddbj:BAA06483.1; (D30808) unknown [Bacillus subtilis]; E=1e-110 pir:T50595; probable alkaline phosphatase [imported] - Streptomyces; E=1e-103; alkaline phosphatase 4731300 phoD 1794345 phoD Rhodopirellula baltica SH 1 alkaline phosphatase NP_868602.1 4729717 D 243090 CDS NP_868603.1 32475609 1792974 complement(4731429..4731620) 1 NC_005027.1 hypothetical protein 4731620 1792974 RB8890 Rhodopirellula baltica SH 1 hypothetical protein NP_868603.1 4731429 R 243090 CDS NP_868604.1 32475610 1790679 complement(4731627..4731824) 1 NC_005027.1 hypothetical protein 4731824 1790679 RB8891 Rhodopirellula baltica SH 1 hypothetical protein NP_868604.1 4731627 R 243090 CDS NP_868605.1 32475611 1790543 4731727..4735809 1 NC_005027.1 best DB hits: BLAST: pir:A83363; probable cytochrome c precursor PA2266 [imported] -; E=6e-09 pir:B81167; cytochrome c552 NMB0717 precursor [similarity] - Neisseria; E=7e-09 pir:F83631; cytochrome c oxidase, subunit II PA0105 [imported] -; E=2e-08 COG: PA2266; COG2010 Cytochrome c, mono- and diheme variants; E=6e-10; cytochrome c precursor 4735809 1790543 RB8892 Rhodopirellula baltica SH 1 cytochrome c precursor NP_868605.1 4731727 D 243090 CDS NP_868606.1 32475612 1795974 4736087..4737343 1 NC_005027.1 PMID: 8093075 best DB hits: BLAST: ddbj:BAA05853.1; (D28493) neuraminidase precursor [Bacteroides; E=4e-90 pir:JC2500; exo-alpha-sialidase (EC 3.2.1.18) precursor -; E=8e-89 swissprot:P31206; NANH_BACFR SIALIDASE (NEURAMINIDASE) -----; E=2e-68 PFAM: PF02012; BNR repeat; E=0.038; neuraminidase precursor 4737343 nanH 1795974 nanH Rhodopirellula baltica SH 1 neuraminidase precursor NP_868606.1 4736087 D 243090 CDS NP_868607.1 32475613 1791456 4737468..4738433 1 NC_005027.1 best DB hits: BLAST: pir:E82335; hypothetical protein VC0334 [imported] - Vibrio cholerae; E=3e-58 PFAM: PF02272; DHHA1 domain; E=0.84; hypothetical protein 4738433 1791456 RB8898 Rhodopirellula baltica SH 1 hypothetical protein NP_868607.1 4737468 D 243090 CDS NP_868608.1 32475614 1792658 4738478..4738645 1 NC_005027.1 hypothetical protein 4738645 1792658 RB8900 Rhodopirellula baltica SH 1 hypothetical protein NP_868608.1 4738478 D 243090 CDS NP_868609.1 32475615 1794973 4738703..4740295 1 NC_005027.1 best DB hits: BLAST: pir:S75223; hypothetical protein sll1835 - Synechocystis sp. (strain; E=0.16; hypothetical protein 4740295 1794973 RB8901 Rhodopirellula baltica SH 1 hypothetical protein NP_868609.1 4738703 D 243090 CDS NP_868610.1 32475616 1790692 complement(4740226..4740474) 1 NC_005027.1 hypothetical protein 4740474 1790692 RB8902 Rhodopirellula baltica SH 1 hypothetical protein NP_868610.1 4740226 R 243090 CDS NP_868611.1 32475617 1795942 complement(4740607..4740744) 1 NC_005027.1 hypothetical protein 4740744 1795942 RB8903 Rhodopirellula baltica SH 1 hypothetical protein NP_868611.1 4740607 R 243090 CDS NP_868612.1 32475618 1796176 4740862..4741962 1 NC_005027.1 PMID: 8541300 PMID: 9004408 best DB hits: BLAST: gb:AAB48319.1; (U29691) CDP-tyvelose epimerase [Yersinia; E=5e-14 pir:B33604; rfbE protein - Salmonella sp; E=1e-11 swissprot:P14169; RFBE_SALTI CDP-TYVELOSE-2-EPIMERASE -----; E=1e-11 COG: PAB1299; COG0451 Nucleoside-diphosphate-sugar epimerases; E=3e-09 PAB0785; COG1088 dTDP-D-glucose 4,6-dehydratase; E=7e-08 PH1742; COG0451 Nucleoside-diphosphate-sugar epimerases; E=2e-07 PFAM: PF01370; NAD dependent epimerase/dehydratase; E=2.5e-05; CDP-tyvelose epimerase 4741962 tyv 1796176 tyv Rhodopirellula baltica SH 1 CDP-tyvelose epimerase NP_868612.1 4740862 D 243090 CDS NP_868613.1 32475619 1791893 4742073..4742894 1 NC_005027.1 best DB hits: BLAST: embl:CAC15463.1; (AJ294477) polyprenol phosphate; E=6e-18 pir:B70945; hypothetical protein Rv2051c - Mycobacterium; E=2e-16 embl:CAB11300.1; (Z98604) hypothetical protein MLCB2052.02; E=2e-14 COG: Rv2051c_2; COG0463 Glycosyltransferases involved in cell wall; E=6e-17 PFAM: PF00535; Glycosyl transferase; E=4.6e-17; polyprenol phosphate mannosyl transferase 1 (Ppm1) 4742894 1791893 RB8905 Rhodopirellula baltica SH 1 polyprenol phosphate mannosyl transferase 1 (Ppm1) NP_868613.1 4742073 D 243090 CDS NP_868614.1 32475620 1791687 4743202..4743357 1 NC_005027.1 hypothetical protein 4743357 1791687 RB8908 Rhodopirellula baltica SH 1 hypothetical protein NP_868614.1 4743202 D 243090 CDS NP_868615.1 32475621 1795444 4743469..4745151 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB05126.1; (AP001511) BH1407~unknown conserved protein; E=2e-60 pir:H71283; conserved hypothetical integral membrane protein TP0771; E=1e-47 embl:CAC27413.1; (AJ307315) membrane protein; E=4e-47 COG: BH1407; COG1283 Na+/phosphate symporter; E=2e-61 PFAM: PF02690; Na+/Pi-cotransporter; E=1.4e-26; Na/phosphate symporter 4745151 1795444 RB8909 Rhodopirellula baltica SH 1 Na/phosphate symporter NP_868615.1 4743469 D 243090 CDS NP_868616.1 32475622 1790305 4745087..4745500 1 NC_005027.1 hypothetical protein 4745500 1790305 RB8910 Rhodopirellula baltica SH 1 hypothetical protein NP_868616.1 4745087 D 243090 CDS NP_868617.1 32475623 1793793 complement(4745692..4746429) 1 NC_005027.1 PMID: 96003619 PMID: 97309356 best DB hits: BLAST: pdb:1DL3; A Chain A, Crystal Structure Of Mutually Generated; E=2e-19 swissprot:Q56320; TRPF_THEMA N-(5'-PHOSPHORIBOSYL)ANTHRANILATE; E=5e-19 pir:E81935; probable phosphoribosylanthranilate isomerase (EC; E=6e-18 COG: TM0139; COG0135 Phosphoribosylanthranilate isomerase; E=5e-20 PFAM: PF00697; N-(5'phosphoribosyl)anthranilate (PR; E=7.3e-41; N-(5'-phosphoribosyl)anthranilate isomerase 4746429 trpF 1793793 trpF Rhodopirellula baltica SH 1 N-(5'-phosphoribosyl)anthranilate isomerase NP_868617.1 4745692 R 243090 CDS NP_868618.1 32475624 1792067 4746481..4747422 1 NC_005027.1 hypothetical protein 4747422 1792067 RB8914 Rhodopirellula baltica SH 1 hypothetical protein NP_868618.1 4746481 D 243090 CDS NP_868619.1 32475625 1795586 4747435..4747659 1 NC_005027.1 hypothetical protein 4747659 1795586 RB8917 Rhodopirellula baltica SH 1 hypothetical protein NP_868619.1 4747435 D 243090 CDS NP_868620.1 32475626 1795825 4747666..4750518 1 NC_005027.1 PMID: 1317842 best DB hits: BLAST: ddbj:BAB17162.1; (AP002868) leucyl-tRNA synthetase; E=0.0 embl:CAB77903.1; (AL161500) leucyl tRNA synthetase; E=0.0 gb:AAK04914.1; AE006315_3 (AE006315) leucyl-tRNA synthetase (EC; E=0.0 COG: TP0586; COG0495 Leucyl-tRNA synthetase; E=0.0 PFAM: PF00133; tRNA synthetases class I (I, L; E=1.4e-39; leucyl-tRNA synthetase 4750518 lueS 1795825 lueS Rhodopirellula baltica SH 1 leucyl-tRNA synthetase NP_868620.1 4747666 D 243090 CDS NP_868621.1 32475627 1796853 complement(4750749..4751930) 1 NC_005027.1 best DB hits: BLAST: embl:CAB69781.1; (AL137187) membrane protein; E=2e-18 pir:T36253; probable membrane protein - Streptomyces coelicolor; E=1e-16 pir:T21781; hypothetical protein F35E2.6 - Caenorhabditis elegans; E=4e-06 COG: BS_yrhL; COG1835 Predicted acyltransferases; E=1e-05; membrane protein- a lipopolysaccharide biosynthesis acyltransferase 4751930 1796853 RB8921 Rhodopirellula baltica SH 1 membrane protein- a lipopolysaccharide biosynthesis acyltransferase NP_868621.1 4750749 R 243090 CDS NP_868622.1 32475628 1789903 4751924..4752370 1 NC_005027.1 hypothetical protein 4752370 1789903 RB8923 Rhodopirellula baltica SH 1 hypothetical protein NP_868622.1 4751924 D 243090 CDS NP_868623.2 161579028 1790801 4752367..4753608 1 NC_005027.1 catalyzes the interconversion of 3-phosphoglycerate and 2-phosphoglycerate; this enzyme does not require the cofactor 2,3-bisphosphoglycerate as a phosphate donor; BPG-independent PGAM; aPGAM; cofactor-independent phosphoglycerate mutase 4753608 bcpC 1790801 bcpC Rhodopirellula baltica SH 1 cofactor-independent phosphoglycerate mutase NP_868623.2 4752367 D 243090 CDS NP_868624.1 32475630 1790510 4753687..4755474 1 NC_005027.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; aspartate kinase 4755474 ask 1790510 ask Rhodopirellula baltica SH 1 aspartate kinase NP_868624.1 4753687 D 243090 CDS NP_868625.1 32475631 1796361 complement(4755670..4757094) 1 NC_005027.1 PMID: 21429239 best DB hits: BLAST: embl:CAC28871.1; (AJ278984) PbrT protein [Ralstonia; E=2e-05 pir:B82990; hypothetical protein PA5248 [imported] - Pseudomonas; E=0.15 PFAM: PF00034; Cytochrome c; E=0.04; PbrT protein- c-type cytochrome 4757094 pbrT 1796361 pbrT Rhodopirellula baltica SH 1 PbrT protein- c-type cytochrome NP_868625.1 4755670 R 243090 CDS NP_868626.1 32475632 1796969 complement(4757129..4758355) 1 NC_005027.1 best DB hits: BLAST: pir:S74905; hypothetical protein slr2060 - Synechocystis sp. (strain; E=4e-10 ddbj:BAB05354.1; (AP001512) BH1635~unknown conserved protein; E=0.004 gb:AAF73599.1; (AE002342) 1-acyl-sn-glycerol-3-phosphate; E=0.004 COG: BH1635; COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; E=4e-04 PFAM: PF01553; Acyltransferase; E=2.7e-09; 1-acyl-sn-glycerol-3-phosphate acyltransferase 4758355 1796969 RB8928 Rhodopirellula baltica SH 1 1-acyl-sn-glycerol-3-phosphate acyltransferase NP_868626.1 4757129 R 243090 CDS NP_868627.1 32475633 1792193 complement(4758352..4759884) 1 NC_005027.1 PMID: 1835671 best DB hits: BLAST: pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=3e-44 pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=2e-42 swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=7e-42 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=3e-45 PFAM: PF01740; STAS domain; E=0.19 PF00069; Protein kinase domain; E=7.3e-58; protein kinase yloP- serine/threonine protein kinase 4759884 1792193 RB8929 Rhodopirellula baltica SH 1 protein kinase yloP- serine/threonine protein kinase NP_868627.1 4758352 R 243090 CDS NP_868628.1 32475634 1792411 4759922..4760098 1 NC_005027.1 hypothetical protein 4760098 1792411 RB8930 Rhodopirellula baltica SH 1 hypothetical protein NP_868628.1 4759922 D 243090 CDS NP_868629.1 32475635 1795589 4760145..4760954 1 NC_005027.1 best DB hits: BLAST: ddbj:BAA84086.1; (AB032065) hypothetical protein [Streptomyces; E=3e-15 embl:CAB61872.1; (AL133252) hypothetical protein SCE46.21; E=7e-14 gb:AAC15821.1; (U44977) unknown [Prochlorococcus marinus]; E=7e-13 COG: sll1095; COG3222 Uncharacterized BCR; E=5e-08; hypothetical protein 4760954 1795589 RB8932 Rhodopirellula baltica SH 1 hypothetical protein NP_868629.1 4760145 D 243090 CDS NP_868630.1 32475636 1793643 4760956..4762170 1 NC_005027.1 PMID: 8682785 best DB hits: BLAST: swissprot:P33642; Y9E8_PSEAE PROBABLE D-AMINO ACID OXIDASE PA4548; E=5e-27 ddbj:BAB05760.1; (AP001514) BH2041~unknown conserved protein; E=6e-26 gb:AAB39269.1; (L48934) homolgous to D-amino acid dehydrogenase; E=1e-25 COG: PA4548; COG0665 Glycine/D-amino acid oxidases (deaminating); E=5e-28 PFAM: PF01494; FAD binding domain; E=0.022 PF02254; KTN NAD-binding domain; E=0.00026 PF00070; Pyridine nucleotide-disulphide; E=0.00011; D-amino acid oxidase 4762170 1793643 RB8935 Rhodopirellula baltica SH 1 D-amino acid oxidase NP_868630.1 4760956 D 243090 CDS NP_868631.1 32475637 1792835 complement(4762195..4763877) 1 NC_005027.1 best DB hits: BLAST: pir:B82434; probable NADH oxidase VCA0644 [imported] - Vibrio; E=1e-102 gb:AAK04884.1; AE006312_4 (AE006312) NADH oxidase [Lactococcus; E=3e-99 gb:AAB90837.1; (AE001077) NADH oxidase (noxA-3) [Archaeoglobus; E=2e-75 COG: VCA0644_1; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; E=5e-87 BH0613; COG1251 NAD(P)H-nitrite reductase; E=1e-18 PFAM: PF01266; D-amino acid oxidase; E=0.47 PF02032; Phytoene dehydrogenase related; E=0.14 PF00070; Pyridine nucleotide-disulphide; E=8.8e-72; NADH oxidase 4763877 noxA 1792835 noxA Rhodopirellula baltica SH 1 NADH oxidase NP_868631.1 4762195 R 243090 CDS NP_868632.1 32475638 1790984 4763963..4764310 1 NC_005027.1 PMID: 8231807 PMID: 9457888 best DB hits: BLAST: pir:B70850; probable transcriptional regulator Rv0081 - Mycobacterium; E=7e-07 pir:D82766; transcriptional regulator ArsR family XF0767 [imported] -; E=1e-06 pir:E70585; probable transcriptional regulator Rv2358 - Mycobacterium; E=4e-06 COG: Rv0081; COG0640 Predicted transcriptional regulators; E=7e-08 PFAM: PF01022; Bacterial regulatory protein, arsR f; E=1.8e-18; transcriptional regulator 4764310 1790984 RB8939 Rhodopirellula baltica SH 1 transcriptional regulator NP_868632.1 4763963 D 243090 CDS NP_868633.1 32475639 1795116 4764387..4766054 1 NC_005027.1 PMID: 96118391 PMID: 20363527 best DB hits: BLAST: pir:S27619; ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.-) -; E=2e-65 pir:S27612; ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.-) -; E=6e-61 pdb:1EYY; A Chain A, Crystal Structure Of The Nadp+ Dependent; E=5e-54 COG: PA2217; COG1012 NAD-dependent aldehyde dehydrogenases; E=4e-54 PFAM: PF00171; Aldehyde dehydrogenase; E=3.5e-08; ketoglutarate semialdehyde dehydrogenase 4766054 1795116 RB8941 Rhodopirellula baltica SH 1 ketoglutarate semialdehyde dehydrogenase NP_868633.1 4764387 D 243090 CDS NP_868634.1 32475640 1794026 complement(4766175..4766504) 1 NC_005027.1 hypothetical protein 4766504 1794026 RB8943 Rhodopirellula baltica SH 1 hypothetical protein NP_868634.1 4766175 R 243090 CDS NP_868635.1 32475641 1794146 4766541..4767818 1 NC_005027.1 hypothetical protein 4767818 1794146 RB8945 Rhodopirellula baltica SH 1 hypothetical protein NP_868635.1 4766541 D 243090 CDS NP_868636.1 32475642 1796546 4767992..4774183 1 NC_005027.1 best DB hits: PFAM: PF02058; Guanylin precursor; E=0.81; hypothetical protein 4774183 1796546 RB8947 Rhodopirellula baltica SH 1 hypothetical protein NP_868636.1 4767992 D 243090 CDS NP_868637.1 32475643 1796651 4774288..4775019 1 NC_005027.1 hypothetical protein 4775019 1796651 RB8957 Rhodopirellula baltica SH 1 hypothetical protein NP_868637.1 4774288 D 243090 CDS NP_868638.1 32475644 1790599 complement(4775133..4777121) 1 NC_005027.1 signal peptide 4777121 1790599 RB8959 Rhodopirellula baltica SH 1 signal peptide NP_868638.1 4775133 R 243090 CDS NP_868639.1 32475645 1793330 complement(4777134..4777445) 1 NC_005027.1 hypothetical protein 4777445 1793330 RB8964 Rhodopirellula baltica SH 1 hypothetical protein NP_868639.1 4777134 R 243090 CDS NP_868640.1 32475646 1791685 4777180..4777473 1 NC_005027.1 hypothetical protein 4777473 1791685 RB8965 Rhodopirellula baltica SH 1 hypothetical protein NP_868640.1 4777180 D 243090 CDS NP_868641.1 32475647 1791503 4777493..4779475 1 NC_005027.1 PMID: 8097179 best DB hits: BLAST: swissprot:O67943; CH60_AQUAE 60 KDA CHAPERONIN (PROTEIN CPN60); E=1e-160 swissprot:P35471; CH63_RHIME 60 KDA CHAPERONIN C (PROTEIN CPN60 C); E=1e-159 swissprot:P45746; CH60_THETH 60 KDA CHAPERONIN (PROTEIN CPN60); E=1e-159 COG: aq_2200; COG0459 Chaperonin GroEL (HSP60 family); E=1e-161 PFAM: PF00118; TCP-1/cpn60 chaperonin family; E=3.3e-207; molecular chaperone GroEL 4779475 groEL 1791503 groEL Rhodopirellula baltica SH 1 molecular chaperone GroEL NP_868641.1 4777493 D 243090 CDS NP_868642.1 32475648 1790059 4779554..4779859 1 NC_005027.1 PMID: 7913076 PMID: 9387235 best DB hits: BLAST: swissprot:P40172; CH10_STRCO 10 KDA CHAPERONIN (PROTEIN CPN10); E=1e-23 swissprot:P26195; CH10_LEGMI 10 KD CHAPERONIN (PROTEIN CPN10); E=5e-22 swissprot:Q07200; CH10_BACST 10 KD CHAPERONIN (PROTEIN CPN10); E=6e-22 COG: BS_groES; COG0234 Co-chaperonin GroES (HSP10); E=1e-22 PFAM: PF00166; Chaperonin 10 Kd subunit; E=5.4e-52; molecular chaperone GroES 4779859 groES 1790059 groES Rhodopirellula baltica SH 1 molecular chaperone GroES NP_868642.1 4779554 D 243090 CDS NP_868643.1 32475649 1796490 4779905..4781527 1 NC_005027.1 PMID: 8097179 best DB hits: BLAST: swissprot:P35471; CH63_RHIME 60 KDA CHAPERONIN C (PROTEIN CPN60 C); E=1e-163 gb:AAF64160.1; AF239163_2 (AF239163) GroEL [Rhizobium; E=1e-163 swissprot:P77829; CH61_BRAJA 60 KD CHAPERONIN 1 (PROTEIN CPN60 1); E=1e-162 COG: TM0506; COG0459 Chaperonin GroEL (HSP60 family); E=1e-163 PFAM: PF00118; TCP-1/cpn60 chaperonin family; E=4.9e-226; molecular chaperone GroEL 4781527 groEL 1796490 groEL Rhodopirellula baltica SH 1 molecular chaperone GroEL NP_868643.1 4779905 D 243090 CDS NP_868644.1 32475650 1795644 4781697..4782872 1 NC_005027.1 PMID: 9061015 best DB hits: BLAST: pir:A83052; DnaJ protein PA4760 [imported] - Pseudomonas aeruginosa; E=6e-83 swissprot:Q9ZFC5; DNAJ_METSS CHAPERONE PROTEIN DNAJ ----- gb:; E=3e-81 gb:AAG54315.1; AE005178_5 (AE005178) chaperone with DnaK; heat; E=1e-80 COG: PA4760; COG0484 Molecular chaperones (contain C-terminal Zn finger; E=5e-84 PFAM: PF00226; DnaJ domain; E=2.8e-32 PF00684; DnaJ central domain (4 repeats); E=1.3e-22 PF01556; DnaJ C terminal region; E=7e-58; molecular chaperone DnaJ 4782872 dnaJ 1795644 dnaJ Rhodopirellula baltica SH 1 molecular chaperone DnaJ NP_868644.1 4781697 D 243090 CDS NP_868645.1 32475651 1797169 4782869..4783471 1 NC_005027.1 PMID: 10024539 PMID: 2108432 PMID: 1339421 best DB hits: BLAST: swissprot:Q9ZCT4; GRPE_RICPR GRPE PROTEIN (HSP-70 COFACTOR); E=3e-19 swissprot:P95333; GRPS_MYXXA GRPS PROTEIN ----- gb: AAC64204.1; E=2e-18 gb:AAC72386.1; (AF098635) chaperone GrpE type 1 [Nicotiana; E=3e-18 COG: RP629; COG0576 Molecular chaperone GrpE (heat shock protein); E=3e-20 PFAM: PF01025; GrpE; E=1e-49; molecular chaperone GrpE 4783471 grpE 1797169 grpE Rhodopirellula baltica SH 1 molecular chaperone GrpE NP_868645.1 4782869 D 243090 CDS NP_868646.1 32475652 1793412 complement(4783556..4783888) 1 NC_005027.1 signal peptide 4783888 1793412 RB8975 Rhodopirellula baltica SH 1 signal peptide NP_868646.1 4783556 R 243090 CDS NP_868647.1 32475653 1792901 4783568..4783846 1 NC_005027.1 best DB hits: BLAST: pir:F72411; conserved hypothetical protein - Thermotoga maritima; E=3e-08 embl:CAB90971.1; (AL355832) hypothetical protein SCE22.04; E=6e-07 pir:B70601; hypothetical protein Rv0991c - Mycobacterium; E=2e-06 COG: TM0144; COG2331 Uncharacterized BCR; E=3e-09; hypothetical protein 4783846 1792901 RB8976 Rhodopirellula baltica SH 1 hypothetical protein NP_868647.1 4783568 D 243090 CDS NP_868648.1 32475654 1794157 4783977..4784783 1 NC_005027.1 best DB hits: BLAST: pir:E83520; conserved hypothetical protein PA1012 [imported] -; E=4e-34 embl:CAB65404.1; (AJ012052) YycJ protein [Staphylococcus aureus]; E=3e-28 embl:CAB64977.1; (AJ012050) YycJ protein [Enterococcus faecalis]; E=2e-27 COG: PA1012; COG1235 Metal-dependent hydrolases of the beta-lactamase; E=4e-35 PAB0518; COG1237 Metal-dependent hydrolases of the beta-lactamase; E=0.005 BS_yqgX; COG0491 Zn-dependent hydrolases, including glyoxylases; E=0.007 PFAM: PF00753; Metallo-beta-lactamase superfamil; E=6.5e-14; metal-dependent hydrolase 4784783 1794157 RB8978 Rhodopirellula baltica SH 1 metal-dependent hydrolase NP_868648.1 4783977 D 243090 CDS NP_868649.1 32475655 1793599 4785013..4786671 1 NC_005027.1 PMID: 2504697 PMID: 8436113 best DB hits: BLAST: swissprot:O34607; SDHA_BACSU PROBABLE L-SERINE DEHYDRATASE, ALPHA; E=1e-26 ddbj:BAB06215.1; (AP001515) L-serine dehydratase alpha subunit; E=9e-26 gb:AAK04929.1; AE006316_10 (AE006316) alpha-subuni L-serine; E=5e-25 COG: BS_ylpA; COG1760 L-serine deaminase; E=1e-27; L-serine dehydratase, alpha chain 4786671 1793599 RB8979 Rhodopirellula baltica SH 1 L-serine dehydratase, alpha chain NP_868649.1 4785013 D 243090 CDS NP_868650.1 32475656 1796511 complement(4786833..4788689) 1 NC_005027.1 hypothetical protein 4788689 1796511 RB8980 Rhodopirellula baltica SH 1 hypothetical protein NP_868650.1 4786833 R 243090 CDS NP_868651.1 32475657 1797167 4788960..4790000 1 NC_005027.1 best DB hits: BLAST: pir:G71146; hypothetical protein PH0385 - Pyrococcus horikoshii; E=3e-58 pir:C83106; conserved hypothetical protein PA4322 [imported] -; E=2e-56 pir:D75008; methanol dehydrogenase regulatory protein (moxr-2); E=3e-56 COG: PH0385; COG0714 MoxR-like ATPases; E=2e-59 PFAM: PF00004; ATPase associated with v; E=0.23 PF01078; Magnesium chelatase, subunit Ch; E=1.9e-12; moxR-like transcriptional regulator protein 4790000 moxR 1797167 moxR Rhodopirellula baltica SH 1 moxR-like transcriptional regulator protein NP_868651.1 4788960 D 243090 CDS NP_868652.1 32475658 1789943 4790156..4790524 1 NC_005027.1 best DB hits: BLAST: pir:A81035; conserved hypothetical protein NMB1852 [imported] -; E=2e-18 gb:AAC78448.1; (AF029361) similar to E. coli ORF, encoded by; E=7e-18 gb:AAC78450.1; (AF029362) similar to E. coli ORF, encoded by; E=2e-17 COG: NMB1852; COG2852 Uncharacterized BCR; E=2e-19; hypothetical protein 4790524 1789943 RB8985 Rhodopirellula baltica SH 1 hypothetical protein NP_868652.1 4790156 D 243090 CDS NP_868653.1 32475659 1794463 complement(4790710..4790856) 1 NC_005027.1 hypothetical protein 4790856 1794463 RB8987 Rhodopirellula baltica SH 1 hypothetical protein NP_868653.1 4790710 R 243090 CDS NP_868654.1 32475660 1796466 4790886..4791797 1 NC_005027.1 best DB hits: BLAST: pir:G70121; conserved hypothetical protein BB0175 - Lyme disease; E=2e-13 swissprot:P71761; YE80_MYCTU HYPOTHETICAL 34.3 KDA PROTEIN RV1480; E=1e-12 pir:D83106; hypothetical protein PA4323 [imported] - Pseudomonas; E=2e-11 COG: BB0175; COG1721 Uncharacterized ACR; E=2e-14 PFAM: PF01882; Protein of unknown function DUF; E=6.5e-23; hypothetical protein 4791797 1796466 RB8988 Rhodopirellula baltica SH 1 hypothetical protein NP_868654.1 4790886 D 243090 CDS NP_868655.1 32475661 1792511 4791794..4793851 1 NC_005027.1 hypothetical protein 4793851 1792511 RB8992 Rhodopirellula baltica SH 1 hypothetical protein NP_868655.1 4791794 D 243090 CDS NP_868656.1 32475662 1794803 4793791..4796112 1 NC_005027.1 PMID: 11214968; transmembrane protein 4796112 1794803 RB8999 Rhodopirellula baltica SH 1 transmembrane protein NP_868656.1 4793791 D 243090 CDS NP_868657.1 32475663 1790107 complement(4794141..4794812) 1 NC_005027.1 signal peptide 4794812 1790107 RB9000 Rhodopirellula baltica SH 1 signal peptide NP_868657.1 4794141 R 243090 CDS NP_868658.1 32475664 1793043 4796028..4799393 1 NC_005027.1 hypothetical protein 4799393 1793043 RB9002 Rhodopirellula baltica SH 1 hypothetical protein NP_868658.1 4796028 D 243090 CDS NP_868659.1 32475665 1791330 4799393..4800166 1 NC_005027.1 signal peptide 4800166 1791330 RB9009 Rhodopirellula baltica SH 1 signal peptide NP_868659.1 4799393 D 243090 CDS NP_868660.1 32475666 1795075 4800154..4800963 1 NC_005027.1 signal peptide 4800963 1795075 RB9010 Rhodopirellula baltica SH 1 signal peptide NP_868660.1 4800154 D 243090 CDS NP_868661.1 32475667 1791588 4800960..4802027 1 NC_005027.1 PMID: 92104976 best DB hits: BLAST: pir:A43300; squalene-hopene cyclase (EC 5.4.99.-) - Alicyclobacillus; E=0.089; squalene-hopene cyclase 4802027 1791588 RB9011 Rhodopirellula baltica SH 1 squalene-hopene cyclase NP_868661.1 4800960 D 243090 CDS NP_868662.1 32475668 1796041 4801715..4804966 1 NC_005027.1 best DB hits: BLAST: pir:F75549; cytochrome c biogenesis protein CycX homolog DR0189; E=1e-15 pir:E69891; cytochrome c biogenesis protein CycX homolog homolog yneN; E=9e-14 swissprot:P35160; RESA_BACSU RESA PROTEIN ----- pir: S45556; E=2e-13 COG: DR0189; COG0526 Thiol-disulfide isomerase and thioredoxins; E=1e-16 PFAM: PF00578; AhpC/TSA family; E=0.072 PF00085; Thioredoxin; E=9.1e-07; cytochrome c biogenesis protein CycX-like protein 4804966 cycX 1796041 cycX Rhodopirellula baltica SH 1 cytochrome c biogenesis protein CycX-like protein NP_868662.1 4801715 D 243090 CDS NP_868663.1 32475669 1797193 complement(4802188..4802682) 1 NC_005027.1 signal peptide 4802682 1797193 RB9013 Rhodopirellula baltica SH 1 signal peptide NP_868663.1 4802188 R 243090 CDS NP_868664.1 32475670 1793259 4804993..4805181 1 NC_005027.1 signal peptide 4805181 1793259 RB9015 Rhodopirellula baltica SH 1 signal peptide NP_868664.1 4804993 D 243090 CDS NP_868665.1 32475671 1796072 4805225..4805806 1 NC_005027.1 best DB hits: BLAST: pir:C82583; RNA polymerase sigma-H factor XF2239 [imported] -; E=0.001 embl:CAC01348.1; (AL390975) ECF-subfamily sigma factor; E=0.018 gb:AAC45221.1; (U87307) extracytoplasmic function alternative; E=0.030 COG: XF2239; COG1595 DNA-directed RNA polymerase specialized sigma; E=1e-04 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=0.016 PF00196; Bacterial regulatory proteins,; E=0.13; RNA polymerase sigma-H factor 4805806 1796072 RB9017 Rhodopirellula baltica SH 1 RNA polymerase sigma-H factor NP_868665.1 4805225 D 243090 CDS NP_868666.1 32475672 1795387 4805803..4807269 1 NC_005027.1 PMID: 7774814 best DB hits: BLAST: swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=4e-41 ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=2e-38 pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=4e-38 COG: BH2504_1; COG0515 Serine/threonine protein kinases; E=2e-39 PFAM: PF00069; Protein kinase domain; E=5.1e-52; serine/threonine-protein kinase pknB 4807269 pknB 1795387 pknB Rhodopirellula baltica SH 1 serine/threonine-protein kinase pknB NP_868666.1 4805803 D 243090 CDS NP_868667.1 32475673 1790678 4807486..4808631 1 NC_005027.1 signal peptide 4808631 1790678 RB9020 Rhodopirellula baltica SH 1 signal peptide NP_868667.1 4807486 D 243090 CDS NP_868668.1 32475674 1790676 4808543..4808899 1 NC_005027.1 hypothetical protein 4808899 1790676 RB9022 Rhodopirellula baltica SH 1 hypothetical protein NP_868668.1 4808543 D 243090 CDS NP_868669.1 32475675 1792567 4808850..4809074 1 NC_005027.1 hypothetical protein 4809074 1792567 RB9023 Rhodopirellula baltica SH 1 hypothetical protein NP_868669.1 4808850 D 243090 CDS NP_868670.1 32475676 1796061 complement(4809050..4809190) 1 NC_005027.1 hypothetical protein 4809190 1796061 RB9024 Rhodopirellula baltica SH 1 hypothetical protein NP_868670.1 4809050 R 243090 CDS NP_868671.1 32475677 1796040 complement(4809363..4810784) 1 NC_005027.1 best DB hits: BLAST: swissprot:O05389; YRBE_BACSU HYPOTHETICAL 37.8 KDA PROTEIN IN; E=2e-08 swissprot:P40332; YISS_BACSU HYPOTHETICAL 37.5 KD PROTEIN IN; E=1e-07 ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=1e-06 COG: BS_yrbE; COG0673 Predicted dehydrogenases and related proteins; E=2e-09 PFAM: PF01408; Oxidoreductase, NAD-bin; E=3.2e-25; NADH-dependent dyhydrogenase 4810784 1796040 RB9026 Rhodopirellula baltica SH 1 NADH-dependent dyhydrogenase NP_868671.1 4809363 R 243090 CDS NP_868672.1 32475678 1796826 4810823..4813102 1 NC_005027.1 PMID: 10571076 best DB hits: BLAST: embl:CAB08809.1; (Z95398) unknown [Mycobacterium leprae]; E=1e-152 pir:C70838; probable zinc metalloproteinase Rv0198c - Mycobacterium; E=1e-150 ddbj:BAA24495.1; (AB010440) PepO [Porphyromonas gingivalis]; E=1e-142 PFAM: PF01447; Thermolysin metallopeptidase, c; E=0.64 PF01431; Peptidase M13; E=1.3e-88; zinc metalloproteinase 4813102 1796826 RB9029 Rhodopirellula baltica SH 1 zinc metalloproteinase NP_868672.1 4810823 D 243090 CDS NP_868673.1 32475679 1795655 4813245..4815728 1 NC_005027.1 hypothetical protein 4815728 1795655 RB9030 Rhodopirellula baltica SH 1 hypothetical protein NP_868673.1 4813245 D 243090 CDS NP_868674.1 32475680 1795820 complement(4815824..4818418) 1 NC_005027.1 hypothetical protein 4818418 1795820 RB9032 Rhodopirellula baltica SH 1 hypothetical protein NP_868674.1 4815824 R 243090 CDS NP_868675.1 32475681 1790405 4818355..4821450 1 NC_005027.1 best DB hits: PFAM: PF00515; TPR Domain; E=0.008; hypothetical protein 4821450 1790405 RB9034 Rhodopirellula baltica SH 1 hypothetical protein NP_868675.1 4818355 D 243090 CDS NP_868676.1 32475682 1795559 4821537..4822571 1 NC_005027.1 best DB hits: BLAST: gb:AAF46853.2; (AE003457) CG4554 gene product [Drosophila; E=0.55 PFAM: PF00515; TPR Domain; E=0.5; hypothetical protein 4822571 1795559 RB9037 Rhodopirellula baltica SH 1 hypothetical protein NP_868676.1 4821537 D 243090 CDS NP_868677.1 32475683 1796404 complement(4822642..4823103) 1 NC_005027.1 hypothetical protein 4823103 1796404 RB9038 Rhodopirellula baltica SH 1 hypothetical protein NP_868677.1 4822642 R 243090 CDS NP_868678.1 32475684 1790708 complement(4823138..4824610) 1 NC_005027.1 sulfatase 4824610 1790708 RB9039 Rhodopirellula baltica SH 1 sulfatase NP_868678.1 4823138 R 243090 CDS NP_868679.1 32475685 1796323 complement(4824607..4827714) 1 NC_005027.1 hypothetical protein 4827714 1796323 RB9042 Rhodopirellula baltica SH 1 hypothetical protein NP_868679.1 4824607 R 243090 CDS NP_868680.1 32475686 1796348 4828072..4829721 1 NC_005027.1 hypothetical protein 4829721 1796348 RB9047 Rhodopirellula baltica SH 1 hypothetical protein NP_868680.1 4828072 D 243090 CDS NP_868681.1 32475687 1795144 complement(4829676..4829846) 1 NC_005027.1 hypothetical protein 4829846 1795144 RB9050 Rhodopirellula baltica SH 1 hypothetical protein NP_868681.1 4829676 R 243090 CDS NP_868682.1 32475688 1795257 4830021..4834586 1 NC_005027.1 best DB hits: BLAST: pir:F69009; probable membrane protein MTH1074 - Methanobacterium; E=1e-19 pir:T28679; fibrinogen-binding protein homolog - Staphylococcus aureus; E=0.008 pir:B75556; hypothetical protein - Deinococcus radiodurans (strain R1); E=0.059 PFAM: PF01345; Domain of unknown function DUF11; E=0.14; hypothetical protein 4834586 1795257 RB9053 Rhodopirellula baltica SH 1 hypothetical protein NP_868682.1 4830021 D 243090 CDS NP_868683.1 32475689 1790606 complement(4834562..4834849) 1 NC_005027.1 best DB hits: BLAST: gb:AAB91043.1; (AE001093) conserved hypothetical protein; E=0.84; hypothetical protein 4834849 1790606 RB9057 Rhodopirellula baltica SH 1 hypothetical protein NP_868683.1 4834562 R 243090 CDS NP_868684.1 32475690 1790104 complement(4834725..4834922) 1 NC_005027.1 best DB hits: BLAST: embl:CAB88963.1; (AL353864) DNA-binding protein.; E=0.38; DNA-binding protein 4834922 1790104 RB9058 Rhodopirellula baltica SH 1 DNA-binding protein NP_868684.1 4834725 R 243090 CDS NP_868685.1 32475691 1791648 4835065..4836423 1 NC_005027.1 signal peptide 4836423 1791648 RB9063 Rhodopirellula baltica SH 1 signal peptide NP_868685.1 4835065 D 243090 CDS NP_868686.1 32475692 1793300 4836501..4839587 1 NC_005027.1 best DB hits: BLAST: gb:AAG54838.1; AE005229_1 (AE005229) RTX family exoprotein; E=0.005 swissprot:Q99144; PEX5_YARLI PEROXISOMAL TARGETING SIGNAL RECEPTOR; E=0.056 pir:A72220; conserved hypothetical protein - Thermotoga maritima; E=0.084 COG: TM1695; COG0457 TPR-repeat-containing proteins; E=0.008 PFAM: PF00515; TPR Domain; E=0.28 PF01839; FG-GAP repeat; E=0.0027; RTX family protein exoprotein 4839587 1793300 RB9066 Rhodopirellula baltica SH 1 RTX family protein exoprotein NP_868686.1 4836501 D 243090 CDS NP_868687.1 32475693 1793883 4839661..4839834 1 NC_005027.1 signal peptide 4839834 1793883 RB9067 Rhodopirellula baltica SH 1 signal peptide NP_868687.1 4839661 D 243090 CDS NP_868688.1 32475694 1792524 complement(4839822..4840145) 1 NC_005027.1 signal peptide 4840145 1792524 RB9068 Rhodopirellula baltica SH 1 signal peptide NP_868688.1 4839822 R 243090 CDS NP_868689.1 32475695 1792085 4840267..4841496 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 4841496 1792085 RB9070 Rhodopirellula baltica SH 1 signal peptide NP_868689.1 4840267 D 243090 CDS NP_868690.1 32475696 1794388 complement(4841493..4841639) 1 NC_005027.1 hypothetical protein 4841639 1794388 RB9072 Rhodopirellula baltica SH 1 hypothetical protein NP_868690.1 4841493 R 243090 CDS NP_868691.1 32475697 1797181 4841676..4844801 1 NC_005027.1 best DB hits: PFAM: PF00515; TPR Domain; E=0.83; hypothetical protein 4844801 1797181 RB9073 Rhodopirellula baltica SH 1 hypothetical protein NP_868691.1 4841676 D 243090 CDS NP_868692.1 32475698 1793223 complement(4844694..4844849) 1 NC_005027.1 hypothetical protein 4844849 1793223 RB9075 Rhodopirellula baltica SH 1 hypothetical protein NP_868692.1 4844694 R 243090 CDS NP_868693.1 32475699 1794820 complement(4844854..4846761) 1 NC_005027.1 best DB hits: BLAST: swissprot:P75790; YBIT_ECOLI HYPOTHETICAL ABC TRANSPORTER; E=1e-60 pir:D83399; probable ATP-binding component of ABC transporter PA1964; E=2e-60 swissprot:O05519; YDIF_BACSU HYPOTHETICAL ABC TRANSPORTER; E=2e-60 COG: ybiT; COG0488 ATPase components of ABC transporters with duplicated; E=1e-61 PA1964; COG0488 ATPase components of ABC transporters with; E=2e-61 yheS; COG0488 ATPase components of ABC transporters with duplicated; E=2e-52 PFAM: PF00005; ABC transporter; E=4.7e-40 PF00006; ATP synthase alpha/beta family; E=0.83 PF00005; ABC transporter; E=8.7e-34; ABC transporter ATP-binding protein 4846761 ybiT 1794820 ybiT Rhodopirellula baltica SH 1 ABC transporter ATP-binding protein NP_868693.1 4844854 R 243090 CDS NP_868694.1 32475700 1790256 4846881..4849790 1 NC_005027.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 4849790 sucA 1790256 sucA Rhodopirellula baltica SH 1 2-oxoglutarate dehydrogenase E1 NP_868694.1 4846881 D 243090 CDS NP_868695.1 32475701 1795011 complement(4849845..4850678) 1 NC_005027.1 hypothetical protein 4850678 1795011 RB9079 Rhodopirellula baltica SH 1 hypothetical protein NP_868695.1 4849845 R 243090 CDS NP_868696.1 32475702 1794704 complement(4850732..4851769) 1 NC_005027.1 best DB hits: BLAST: pir:F83600; conserved hypothetical protein PA0368 [imported] -; E=6e-21 gb:AAG24650.1; (AF193866) unknown [Alcanivorax borkumensis]; E=8e-17 pir:F81794; conserved hypothetical protein NMA2211 [imported] -; E=1e-16 COG: PA0368; COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold; E=5e-22 NMB0276; COG0429 Predicted hydrolase of the alpha/beta-hydrolase; E=3e-17 VC2610; COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold; E=7e-15 PFAM: PF00561; alpha/beta hydrolase fold; E=0.0028; hydrolase 4851769 1794704 RB9080 Rhodopirellula baltica SH 1 hydrolase NP_868696.1 4850732 R 243090 CDS NP_868697.1 32475703 1795435 4851788..4852357 1 NC_005027.1 best DB hits: BLAST: swissprot:O66967; Y768_AQUAE HYPOTHETICAL PROTEIN AQ_768 -----; E=1e-17 swissprot:O26683; Y583_METTH HYPOTHETICAL PROTEIN MTH583 -----; E=7e-17 swissprot:Q58963; YF68_METJA HYPOTHETICAL PROTEIN MJ1568 -----; E=1e-14 COG: aq_768; COG1514 2'-5' RNA ligase; E=1e-18 PFAM: PF02834; 2',5' RNA ligase; E=4.1e-11; 2'-5' RNA ligase 4852357 1795435 RB9083 Rhodopirellula baltica SH 1 2'-5' RNA ligase NP_868697.1 4851788 D 243090 CDS NP_868698.1 32475704 1790707 4852354..4853430 1 NC_005027.1 PMID: 1885539 best DB hits: BLAST: ddbj:BAB04267.1; (AP001508) glycoprotein endopeptidase [Bacillus; E=3e-64 swissprot:O05518; GCP_BACSU PROBABLE O-SIALOGLYCOPROTEIN; E=4e-62 gb:AAK03322.1; (AE006163) Gcp [Pasteurella multocida]; E=1e-61 COG: BH0548; COG0533 Metal-dependent proteases with possible chaperone; E=3e-65 PFAM: PF00814; Glycoprotease; E=1.8e-113; glycoprotein endopeptidase 4853430 1790707 RB9084 Rhodopirellula baltica SH 1 glycoprotein endopeptidase NP_868698.1 4852354 D 243090 CDS NP_868699.1 32475705 1796062 4853477..4854022 1 NC_005027.1 PMID: 21595285; hypothetical protein 4854022 1796062 RB9087 Rhodopirellula baltica SH 1 hypothetical protein NP_868699.1 4853477 D 243090 CDS NP_868700.1 32475706 1790093 complement(4854131..4854832) 1 NC_005027.1 PMID: 9020051 best DB hits: BLAST: swissprot:P46016; 6PGL_ANASP 6-PHOSPHOGLUCONOLACTONASE (6PGL); E=5e-36 pir:S76814; hypothetical protein - Synechocystis sp. (strain PCC; E=8e-31 swissprot:P74618; 6PGL_SYNY3 6-PHOSPHOGLUCONOLACTONASE (6PGL); E=8e-31 COG: sll1479; COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate; E=8e-32 PFAM: PF00256; Ribosomal protein L15; E=0.018; 6-phosphogluconolactonase 4854832 pgl 1790093 pgl Rhodopirellula baltica SH 1 6-phosphogluconolactonase NP_868700.1 4854131 R 243090 CDS NP_868701.1 32475707 1796458 complement(4854896..4855705) 1 NC_005027.1 PMID: 10223988 best DB hits: BLAST: pir:T50554; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC; E=2e-47 swissprot:Q10505; PANB_MYCTU 3-METHYL-2-OXOBUTANOATE; E=1e-46 pir:T50565; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC; E=1e-45 COG: Rv2225; COG0413 Ketopantoate hydroxymethyltransferase; E=1e-47 PFAM: PF02548; Ketopantoate hydroxymethyltra; E=3.6e-110; 3-methyl-2-oxobutanoate hydroxymethyltransferase 4855705 panB 1796458 panB Rhodopirellula baltica SH 1 3-methyl-2-oxobutanoate hydroxymethyltransferase NP_868701.1 4854896 R 243090 CDS NP_868702.1 32475708 1796287 complement(4855732..4857735) 1 NC_005027.1 PMID: 8020961 PMID: 7744061 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=2e-35 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=5e-35 pir:S69336; arylsulfatase (EC 3.1.6.1) - Pseudomonas aeruginosa; E=6e-33 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=4e-33 PFAM: PF00884; Sulfatase; E=1.8e-50; N-acetylgalactosamine 6-sulfatase (GALNS) 4857735 atsA 1796287 atsA Rhodopirellula baltica SH 1 N-acetylgalactosamine 6-sulfatase (GALNS) NP_868702.1 4855732 R 243090 CDS NP_868703.1 32475709 1796748 4857876..4858808 1 NC_005027.1 PMID: 7499387 best DB hits: BLAST: pir:A75096; UTP--glucose-1-phosphate uridylyltransferase (EC; E=3e-20 gb:AAD32398.1; AAD32398 (AF065404) pXO1-94 [Bacillus anthracis]; E=4e-19 swissprot:Q54713; HASC_STRPY UTP--GLUCOSE-1-PHOSPHATE; E=2e-17 COG: PAB0771; COG1210 UDP-glucose pyrophosphorylase; E=3e-21 PAB0784; COG1209 dTDP-glucose pyrophosphorylase; E=3e-04 PFAM: PF00483; Nucleotidyl transferase; E=0.014; UTP-glucose-1-phosphate uridylyltransferase 4858808 hasC 1796748 hasC Rhodopirellula baltica SH 1 UTP-glucose-1-phosphate uridylyltransferase NP_868703.1 4857876 D 243090 CDS NP_868704.1 32475710 1796256 4858808..4862176 1 NC_005027.1 PMID: 8666250 best DB hits: BLAST: swissprot:Q43772; UDPG_HORVU UTP--GLUCOSE-1-PHOSPHATE; E=3e-04 swissprot:P57751; UDPG_ARATH UTP--GLUCOSE-1-PHOSPHATE; E=0.001 swissprot:O64459; UDPG_PYRPY UTP--GLUCOSE-1-PHOSPHATE; E=0.001; UTP-glucose-1-phosphate uridylyltransferase 4862176 1796256 RB9096 Rhodopirellula baltica SH 1 UTP-glucose-1-phosphate uridylyltransferase NP_868704.1 4858808 D 243090 CDS NP_868705.1 32475711 1793896 complement(4862220..4863167) 1 NC_005027.1 hypothetical protein 4863167 1793896 RB9100 Rhodopirellula baltica SH 1 hypothetical protein NP_868705.1 4862220 R 243090 CDS NP_868706.1 32475712 1796845 complement(4863130..4863681) 1 NC_005027.1 best DB hits: BLAST: pir:E82631; conserved hypothetical protein XF1840 [imported] -; E=4e-08 pir:F81836; probable periplasmic protein NMA1457 [imported] -; E=7e-08 pir:D81130; conserved hypothetical protein NMB1030 [imported] -; E=1e-07 COG: XF1840; COG2353 Uncharacterized BCR; E=4e-09; hypothetical protein 4863681 1796845 RB9101 Rhodopirellula baltica SH 1 hypothetical protein NP_868706.1 4863130 R 243090 CDS NP_868707.1 32475713 1791231 complement(4863850..4866549) 1 NC_005027.1 PMID: 8759846 best DB hits: BLAST: swissprot:P74361; CLPB_SYNY3 CLPB PROTEIN ----- pir: S76197; E=0.0 gb:AAK03788.1; (AE006206) ClpB [Pasteurella multocida]; E=0.0 swissprot:P53533; CLPB_SYNP7 CLPB PROTEIN ----- gb: AAB09631.1; E=0.0 COG: slr1641; COG0542 ATPases with chaperone activity, ATP-binding domain; E=0.0 PFAM: PF02861; Clp amino terminal domain; E=1.1e-07 PF02421; Ferrous iron transport protein; E=0.54 PF00004; ATPase associated with v; E=6e-14; ClpB protein 4866549 clpB 1791231 clpB Rhodopirellula baltica SH 1 ClpB protein NP_868707.1 4863850 R 243090 CDS NP_868708.1 32475714 1796442 complement(4866559..4866696) 1 NC_005027.1 hypothetical protein 4866696 1796442 RB9104 Rhodopirellula baltica SH 1 hypothetical protein NP_868708.1 4866559 R 243090 CDS NP_868709.1 32475715 1797178 complement(4866720..4868834) 1 NC_005027.1 PMID: 9061015 best DB hits: BLAST: ddbj:BAA19796.1; (D78133) DnaK protein [Rhodopseudomonas sp.]; E=0.0 gb:AAK00145.1; AF222752_1 (AF222752) heat shock protein; E=0.0 swissprot:P28608; DNAK_BORBU DNAK PROTEIN (HEAT SHOCK PROTEIN 70); E=0.0 COG: BB0518; COG0443 Molecular chaperone; E=0.0 PFAM: PF00012; Hsp70 protein; E=0; molecular chaperone DnaK 4868834 dnaK 1797178 dnaK Rhodopirellula baltica SH 1 molecular chaperone DnaK NP_868709.1 4866720 R 243090 CDS NP_868710.1 32475716 1793458 4868997..4870088 1 NC_005027.1 PMID: 1919506 best DB hits: BLAST: swissprot:O67085; PHEA_AQUAE P-PROTEIN [INCLUDES: CHORISMATE; E=2e-40 swissprot:P27603; PHEA_PSEST P-PROTEIN [INCLUDES: CHORISMATE; E=8e-40 gb:AAD47360.1; AF038578_3 (AF038578) chorismate mutaseprephenate; E=1e-38 COG: aq_951_2; COG0077 Prephenate dehydratase; E=9e-40 PFAM: PF00800; Prephenate dehydratase; E=4.5e-50 PF01842; ACT domain; E=3.1e-09; P-protein (PheA) 4870088 pheA 1793458 pheA Rhodopirellula baltica SH 1 P-protein (PheA) NP_868710.1 4868997 D 243090 CDS NP_868711.1 32475717 1795795 complement(4870326..4871405) 1 NC_005027.1 PMID: 8997703 best DB hits: BLAST: pir:H82493; MoxR-related protein VCA0175 [imported] - Vibrio; E=4e-67 pir:C75037; methanol dehydrogenase regulatory protein (moxr-3); E=3e-65 pir:G71146; hypothetical protein PH0385 - Pyrococcus horikoshii; E=6e-65 COG: VCA0175; COG0714 MoxR-like ATPases; E=4e-68 PFAM: PF00004; ATPase associated with; E=0.00052 PF01078; Magnesium chelatase, subunit; E=0.00014; MoxR-related protein 4871405 moxR 1795795 moxR Rhodopirellula baltica SH 1 MoxR-related protein NP_868711.1 4870326 R 243090 CDS NP_868712.1 32475718 1795730 complement(4871365..4874058) 1 NC_005027.1 PMID: 2170947 PMID: 2540413 best DB hits: BLAST: swissprot:O84193; GYRB_CHLTR DNA GYRASE SUBUNIT B ----- pir:; E=1e-154 gb:AAC33551.1; (AF044267) gyrase subunit B [Chlamydia; E=1e-153 swissprot:P13364; GYRB_PSEPU DNA GYRASE SUBUNIT B ----- pir:; E=1e-141 COG: CT190; COG0187 DNA gyrase (topoisomerase II) B subunit; E=1e-155 PFAM: PF02518; Histidine kinase-, DNA gyrase B; E=2.2e-17 PF00204; DNA topoisomerase II (N-termina; E=6.5e-78 PF00750; tRNA synthetases class I (R); E=0.49; DNA gyrase subunit B 4874058 gyrB 1795730 gyrB Rhodopirellula baltica SH 1 DNA gyrase subunit B NP_868712.1 4871365 R 243090 CDS NP_868713.1 32475719 1791475 complement(4874173..4875924) 1 NC_005027.1 best DB hits: BLAST: pir:H69064; serinethreonine protein kinase related protein -; E=0.037 embl:CAB57415.1; (AL121746) hypothetical protein SCF73.10c; E=0.075 COG: MTH1485; COG1520 Uncharacterized proteins of WD40-like repeat family; E=0.003 PFAM: PF01011; PQQ enzyme repeat; E=0.25; serine/threonine protein kinase related protein 4875924 1791475 RB9110 Rhodopirellula baltica SH 1 serine/threonine protein kinase related protein NP_868713.1 4874173 R 243090 CDS NP_868714.1 32475720 1791950 4875751..4876041 1 NC_005027.1 best DB hits: BLAST: pir:E83275; thymidylate kinase PA2962 [imported] - Pseudomonas; E=0.27; thymidylate kinase 4876041 1791950 RB9112 Rhodopirellula baltica SH 1 thymidylate kinase NP_868714.1 4875751 D 243090 CDS NP_868715.1 32475721 1793787 4876026..4876598 1 NC_005027.1 best DB hits: BLAST: pir:A83103; conserved hypothetical protein PA4336 [imported] -; E=3e-62 gb:AAF26988.1; AC018363_33 (AC018363) unknown protein [Arabidopsis; E=2e-55 gb:AAD56430.1; AF158699_2 (AF158699) unknown [Burkholderia; E=1e-51 COG: PA4336; COG0693 intracellular protease/amidase; E=3e-63 PAB1200; COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase,; E=5e-04 Cj0899c; COG0693 intracellular protease/amidase; E=5e-04 PFAM: PF01965; ThiJ/PfpI family; E=2.5e-45; intracellular proteinase 4876598 pfpI 1793787 pfpI Rhodopirellula baltica SH 1 intracellular proteinase NP_868715.1 4876026 D 243090 CDS NP_868716.1 32475722 1796895 4876598..4878172 1 NC_005027.1 hypothetical protein 4878172 1796895 RB9114 Rhodopirellula baltica SH 1 hypothetical protein NP_868716.1 4876598 D 243090 CDS NP_868717.1 32475723 1793579 4878182..4878685 1 NC_005027.1 best DB hits: BLAST: pir:A82306; conserved hypothetical protein VC0580 [imported] -; E=1e-05 swissprot:Q10819; YS98_MYCTU HYPOTHETICAL 14.2 KDA PROTEIN RV2898C; E=8e-04 pir:H83091; conserved hypothetical protein PA4424 [imported] -; E=0.001 COG: VC0580; COG0792 Predicted endonuclease distantly related to archaeal; E=1e-06 Rv2898c; COG0792 Predicted endonuclease distantly related to; E=8e-05 PA4424; COG0792 Predicted endonuclease distantly related to archaeal; E=1e-04 PFAM: PF02021; Uncharacterised protein family; E=1.4e-18; endonuclease 4878685 1793579 RB9115 Rhodopirellula baltica SH 1 endonuclease NP_868717.1 4878182 D 243090 CDS NP_868718.1 32475724 1793892 complement(4878718..4879983) 1 NC_005027.1 PMID: 99047594 best DB hits: BLAST: pir:B82973; probable peptidic bond hydrolase PA5390 [imported] -; E=2e-32 gb:AAC82366.1; (AF055904) acetylornithine deacetylase; ArgE; E=3e-31 gb:AAK03201.1; (AE006153) ArgE [Pasteurella multocida]; E=8e-27 COG: PA5390; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate; E=2e-33 BS_argE; COG0624 Acetylornithine; E=8e-12 AF0904; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate; E=1e-10 PFAM: PF01546; Peptidase M20/M25/M40; E=0.12; acetylornithine deacetylase ArgE 4879983 argE 1793892 argE Rhodopirellula baltica SH 1 acetylornithine deacetylase ArgE NP_868718.1 4878718 R 243090 CDS NP_868719.1 32475725 1796838 4879893..4881428 1 NC_005027.1 best DB hits: BLAST: ddbj:BAA75383.1; (AB013374) Ykok [Bacillus halodurans]; E=5e-38 ddbj:BAB04230.1; (AP001508) magnesium (Mg2+) transporter; E=5e-38 pir:B81018; magnesium transporter NMB1999 [imported] - Neisseria; E=2e-37 COG: BH0511; COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain); E=5e-39 PFAM: PF00571; CBS domain; E=0.081 PF01769; Divalent cation transporter; E=7.3e-28; magnesium transporter Ykok 4881428 ykoK 1796838 ykoK Rhodopirellula baltica SH 1 magnesium transporter Ykok NP_868719.1 4879893 D 243090 CDS NP_868720.1 32475726 1792503 complement(4881482..4885273) 1 NC_005027.1 best DB hits: BLAST: pir:T36406; hypothetical protein SCF34.07 - Streptomyces coelicolor; E=1e-06 pir:F75417; L-sorbosone dehydrogenase - Deinococcus radiodurans; E=7e-04 pir:C75617; probable oxidoreductase - Deinococcus radiodurans; E=0.022 COG: DR1257; COG2133 Glucose/sorbosone dehydrogenases; E=7e-05 PFAM: PF02837; Glycosyl hydrolases family 2,; E=0.00037 PF00034; Cytochrome c; E=0.0092; hypothetical protein 4885273 1792503 RB9120 Rhodopirellula baltica SH 1 hypothetical protein NP_868720.1 4881482 R 243090 CDS NP_868721.1 32475727 1795332 4885253..4885417 1 NC_005027.1 hypothetical protein 4885417 1795332 RB9126 Rhodopirellula baltica SH 1 hypothetical protein NP_868721.1 4885253 D 243090 CDS NP_868722.1 32475728 1792848 complement(4885396..4886001) 1 NC_005027.1 hypothetical protein 4886001 1792848 RB9128 Rhodopirellula baltica SH 1 hypothetical protein NP_868722.1 4885396 R 243090 CDS NP_868723.1 32475729 1790815 complement(4886018..4886818) 1 NC_005027.1 hypothetical protein 4886818 1790815 RB9130 Rhodopirellula baltica SH 1 hypothetical protein NP_868723.1 4886018 R 243090 CDS NP_868724.1 32475730 1793756 4886727..4888004 1 NC_005027.1 best DB hits: BLAST: swissprot:P55480; Y4HM_RHISN HYPOTHETICAL PROTEIN Y4HM PRECURSOR; E=7e-52 pir:D69803; hypothetical protein yfiI - Bacillus subtilis -----; E=7e-49 pir:T34927; probable oxidoreductase - Streptomyces coelicolor; E=1e-21 COG: BS_yfiI; COG0673 Predicted dehydrogenases and related proteins; E=7e-50 PFAM: PF01408; Oxidoreductase, NAD-bin; E=6.1e-30 PF02894; Oxidoreductase, C-termi; E=2.5e-09; hypothetical protein 4888004 1793756 RB9132 Rhodopirellula baltica SH 1 hypothetical protein NP_868724.1 4886727 D 243090 CDS NP_868725.1 32475731 1794108 4888021..4888752 1 NC_005027.1 PMID: 10518523 PMID: 11427897 best DB hits: BLAST: swissprot:Q06755; ISPD_BACSU; E=2e-32 pir:S66119; conserved hypothetical protein yacM - Bacillus subtilis; E=7e-32 swissprot:Q9KGF8; ISPD_BACHD; E=4e-28 COG: BS_yacM; COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; E=7e-33 PFAM: PF01128; Uncharacterized protein family UPF00; E=4.2e-63; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 4888752 ispD 1794108 ispD Rhodopirellula baltica SH 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NP_868725.1 4888021 D 243090 CDS NP_868726.1 32475732 1797176 4888731..4890047 1 NC_005027.1 PMID: 3011073 best DB hits: BLAST: swissprot:P04077; SYY_BACCA TYROSYL-TRNA SYNTHETASE; E=1e-104 swissprot:P00952; SYY_BACST TYROSYL-TRNA SYNTHETASE; E=1e-104 swissprot:P22326; SYY1_BACSU TYROSYL-TRNA SYNTHETASE 1; E=1e-98 COG: BS_tyrS; COG0162 Tyrosyl-tRNA synthetase; E=1e-99 PFAM: PF00579; tRNA synthetases class I (W and; E=2.3e-107; tyrosyl-tRNA synthetase 4890047 tyrS 1797176 tyrS Rhodopirellula baltica SH 1 tyrosyl-tRNA synthetase NP_868726.1 4888731 D 243090 CDS NP_868727.1 32475733 1792422 4890050..4891843 1 NC_005027.1 PMID: 8917072 best DB hits: BLAST: pir:T05214; hypothetical protein F17I5.50 - Arabidopsis thaliana; E=1e-14 pir:T00624; endo-1,4-beta-xylanase homolog T27I1.7 - Arabidopsis; E=6e-14 ddbj:BAA88262.1; (AB008015) similar to xylan endohydrolase; E=1e-12; endo-1,4-beta-xylanase 4891843 xlnC 1792422 xlnC Rhodopirellula baltica SH 1 endo-1,4-beta-xylanase NP_868727.1 4890050 D 243090 CDS NP_868728.1 32475734 1790773 4891836..4892876 1 NC_005027.1 PMID: 9873033 best DB hits: BLAST: pir:E72640; hypothetical protein APE0557 - Aeropyrum pernix (strain; E=7e-07 embl:CAC22834.1; (AL512963) hypothetical [Sulfolobus; E=5e-06 swissprot:P37872; YBXB_BACSU HYPOTHETICAL 22.5 KDA PROTEIN IN; E=9e-06 COG: APE0557; COG0116 Predicted N6-adenine-specific DNA methylases; E=7e-08 BS_ybxB; COG2813 16S RNA G1207 methylase RsmC; E=9e-07 MTH1918; COG2263 Predicted RNA methylase; E=0.004; ribosomal RNA small subunit methyltransferase C 4892876 rsmC 1790773 rsmC Rhodopirellula baltica SH 1 ribosomal RNA small subunit methyltransferase C NP_868728.1 4891836 D 243090 CDS NP_868729.1 32475735 1791505 4892884..4893279 1 NC_005027.1 best DB hits: BLAST: embl:CAA62188.1; (X90568) Protein sequence and annotation; E=0.25 pir:I38344; titin, cardiac muscle [validated] - human; E=0.25; titin 4893279 titin 1791505 titin Rhodopirellula baltica SH 1 titin NP_868729.1 4892884 D 243090 CDS NP_868730.1 32475736 1790196 complement(4893247..4893513) 1 NC_005027.1 hypothetical protein 4893513 1790196 RB9143 Rhodopirellula baltica SH 1 hypothetical protein NP_868730.1 4893247 R 243090 CDS NP_868731.1 32475737 1790952 4893346..4893798 1 NC_005027.1 hypothetical protein 4893798 1790952 RB9144 Rhodopirellula baltica SH 1 hypothetical protein NP_868731.1 4893346 D 243090 CDS NP_868732.1 32475738 1792423 complement(4893681..4895339) 1 NC_005027.1 best DB hits: BLAST: pir:A72314; hypothetical protein TM0950 - Thermotoga maritima; E=0.001; hypothetical protein 4895339 1792423 RB9146 Rhodopirellula baltica SH 1 hypothetical protein NP_868732.1 4893681 R 243090 CDS NP_868733.1 32475739 1790457 complement(4895461..4895574) 1 NC_005027.1 hypothetical protein 4895574 1790457 RB9149 Rhodopirellula baltica SH 1 hypothetical protein NP_868733.1 4895461 R 243090 CDS NP_868734.1 32475740 1791886 4895546..4895821 1 NC_005027.1 hypothetical protein 4895821 1791886 RB9151 Rhodopirellula baltica SH 1 hypothetical protein NP_868734.1 4895546 D 243090 CDS NP_868735.1 32475741 1795069 complement(4895920..4896042) 1 NC_005027.1 hypothetical protein 4896042 1795069 RB9155 Rhodopirellula baltica SH 1 hypothetical protein NP_868735.1 4895920 R 243090 CDS NP_868736.1 32475742 1791281 4896072..4899233 1 NC_005027.1 best DB hits: BLAST: pir:B70374; conserved hypothetical protein aq_854 - Aquifex aeolicus; E=2e-04 pir:H71261; conserved hypothetical protein TP0954 - syphilis; E=0.21 gb:AAF26789.1; AC016829_13 (AC016829) O-linked GlcNAc; E=0.44 COG: aq_854; COG0457 TPR-repeat-containing proteins; E=2e-05 PFAM: PF00515; TPR Domain; E=0.14; hypothetical protein 4899233 1791281 RB9156 Rhodopirellula baltica SH 1 hypothetical protein NP_868736.1 4896072 D 243090 CDS NP_868737.1 32475743 1797175 complement(4899277..4899549) 1 NC_005027.1 signal peptide 4899549 1797175 RB9157 Rhodopirellula baltica SH 1 signal peptide NP_868737.1 4899277 R 243090 CDS NP_868738.1 32475744 1795945 complement(4899546..4900523) 1 NC_005027.1 hypothetical protein 4900523 1795945 RB9159 Rhodopirellula baltica SH 1 hypothetical protein NP_868738.1 4899546 R 243090 CDS NP_868739.1 32475745 1796082 4900491..4900847 1 NC_005027.1 hypothetical protein 4900847 1796082 RB9160 Rhodopirellula baltica SH 1 hypothetical protein NP_868739.1 4900491 D 243090 CDS NP_868740.1 32475746 1791876 complement(4900858..4901631) 1 NC_005027.1 metallopeptidase 4901631 1791876 RB9161 Rhodopirellula baltica SH 1 metallopeptidase NP_868740.1 4900858 R 243090 CDS NP_868741.1 32475747 1791171 complement(4901660..4903453) 1 NC_005027.1 best DB hits: BLAST: pir:G70687; hypothetical protein Rv1732c - Mycobacterium; E=5e-13 pir:S75290; hypothetical protein sll1289 - Synechocystis sp. (strain; E=6e-11 gb:AAG19194.1; (AE005016) Vng0711c [Halobacterium sp. NRC-1]; E=1e-10 COG: Rv1732c; COG0526 Thiol-disulfide isomerase and thioredoxins; E=5e-14 DR2242; COG0450 Thiol - alkyl hydroperoxide reductases; E=4e-06 BS_yneN; COG0526 Thiol-disulfide isomerase and thioredoxins; E=5e-06 PFAM: PF00578; AhpC/TSA family; E=0.00037 PF00255; Glutathione peroxidase; E=0.77; thiol-disulfide isomerase 4903453 1791171 RB9164 Rhodopirellula baltica SH 1 thiol-disulfide isomerase NP_868741.1 4901660 R 243090 CDS NP_868742.1 32475748 1796384 complement(4903417..4903614) 1 NC_005027.1 hypothetical protein 4903614 1796384 RB9167 Rhodopirellula baltica SH 1 hypothetical protein NP_868742.1 4903417 R 243090 CDS NP_868743.1 32475749 1796626 complement(4903635..4904627) 1 NC_005027.1 PMID: 10531250 best DB hits: BLAST: pir:G70415; nucleotide sugar epimerase - Aquifex aeolicus -----; E=5e-90 ddbj:BAB07428.1; (AP001519) nucleotide sugar epimerase; E=6e-57 gb:AAD50494.1; AF172324_12 (AF172324) WbnF [Escherichia coli]; E=2e-55 COG: aq_1335; COG0451 Nucleoside-diphosphate-sugar epimerases; E=5e-91 XF0255; COG1088 dTDP-D-glucose 4,6-dehydratase; E=1e-23 PA1384; COG1087 UDP-glucose 4-epimerase; E=1e-23 PFAM: PF00106; short chain dehydrogenase; E=0.16 PF01370; NAD dependent epimerase/dehydratase; E=8.9e-98; nucleotide sugar epimerase 4904627 1796626 RB9168 Rhodopirellula baltica SH 1 nucleotide sugar epimerase NP_868743.1 4903635 R 243090 CDS NP_868744.1 32475750 1793574 4904739..4905881 1 NC_005027.1 PMID: 8226648 best DB hits: BLAST: pir:A82264; UDP-N-acetylglucosamine 2-epimerase VC0917 [imported] -; E=1e-106 pir:T44828; probable UDP-N-acetylglucosamine 2-epimerase (EC; E=1e-101 swissprot:P27828; WECB_ECOLI UDP-N-ACETYLGLUCOSAMINE 2-EPIMERASE; E=1e-101 COG: VC0917; COG0381 UDP-N-acetylglucosamine 2-epimerase; E=1e-107 PFAM: PF02350; UDP-N-acetylglucosamine 2-epimera; E=1.7e-162; UDP-N-acetylglucosamine 2-epimerase 4905881 wecB 1793574 wecB Rhodopirellula baltica SH 1 UDP-N-acetylglucosamine 2-epimerase NP_868744.1 4904739 D 243090 CDS NP_868745.1 32475751 1794451 complement(4905872..4907278) 1 NC_005027.1 signal peptide 4907278 1794451 RB9170 Rhodopirellula baltica SH 1 signal peptide NP_868745.1 4905872 R 243090 CDS NP_868746.1 32475752 1789987 complement(4907485..4908450) 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein 4908450 1789987 RB9174 Rhodopirellula baltica SH 1 hypothetical protein NP_868746.1 4907485 R 243090 CDS NP_868747.1 32475753 1792159 4908466..4908651 1 NC_005027.1 hypothetical protein 4908651 1792159 RB9176 Rhodopirellula baltica SH 1 hypothetical protein NP_868747.1 4908466 D 243090 CDS NP_868748.1 32475754 1790635 4908835..4910352 1 NC_005027.1 signal peptide 4910352 1790635 RB9180 Rhodopirellula baltica SH 1 signal peptide NP_868748.1 4908835 D 243090 CDS NP_868749.1 32475755 1796162 4910352..4912637 1 NC_005027.1 PMID: 8439670 best DB hits: BLAST: pir:F70345; polysaccharide biosynthesis protein - Aquifex aeolicus; E=2e-07 pir:S70958; otnA protein - Vibrio cholerae ----- embl:; E=1e-06 swissprot:Q02728; EXOF_RHIME EXOPOLYSACCHARIDE PRODUCTION PROTEIN; E=3e-05 COG: aq_505; COG1596 Periplasmic protein involved in polysaccharide; E=2e-08 yccZ; COG1596 Periplasmic protein involved in polysaccharide export; E=1e-05 PA2234; COG1596 Periplasmic protein involved in polysaccharide; E=0.001 PFAM: PF00159; Pancreatic hormone peptide; E=0.82; polysaccharide biosynthesis protein 4912637 exoF 1796162 exoF Rhodopirellula baltica SH 1 polysaccharide biosynthesis protein NP_868749.1 4910352 D 243090 CDS NP_868750.1 32475756 1796712 4912719..4914002 1 NC_005027.1 PMID: 6350601 best DB hits: BLAST: gb:AAK05382.1; AE006360_11 (AE006360) diaminopimelate; E=1e-106 swissprot:P31851; TABA_PSESZ TABA PROTEIN ----- pir: S27649; E=6e-92 swissprot:O27390; DCDA_METTH DIAMINOPIMELATE DECARBOXYLASE (DAP; E=7e-59 COG: MTH1335; COG0019 Diaminopimelate decarboxylase; E=7e-60 PFAM: PF02784; Pyridoxal-dependent decarboxy; E=3.1e-40 PF00278; Pyridoxal-dependent decarboxy; E=1.4e-29; diaminopimelate decarboxylase 4914002 lysA 1796712 lysA Rhodopirellula baltica SH 1 diaminopimelate decarboxylase NP_868750.1 4912719 D 243090 CDS NP_868751.1 32475757 1790544 4914039..4914437 1 NC_005027.1 best DB hits: BLAST: pir:E75319; ferredoxin - Deinococcus radiodurans (strain R1) -----; E=2e-18 pir:C83272; Na+-translocating NADH:quinone oxidoreductase, subunit; E=0.002 gb:AAD03987.1; (AF079317) xylene monooxygenase electron transfer; E=0.005 COG: DR2075; COG0633 Ferredoxin; E=2e-19 PA2994; COG2871 Na+-transporting NADH:ubiquinone oxidoreductase beta; E=2e-04 CPn0883; COG2871 Na+-transporting NADH:ubiquinone oxidoreductase; E=0.001 PFAM: PF00111; 2Fe-2S iron-sulfur cluster binding d; E=2.6e-05; ferredoxin 4914437 1790544 RB9190 Rhodopirellula baltica SH 1 ferredoxin NP_868751.1 4914039 D 243090 CDS NP_868752.1 32475758 1791671 4914516..4914653 1 NC_005027.1 hypothetical protein 4914653 1791671 RB9191 Rhodopirellula baltica SH 1 hypothetical protein NP_868752.1 4914516 D 243090 CDS NP_868753.1 32475759 1791531 complement(4914631..4916001) 1 NC_005027.1 PMID: 7910580 PMID: 1572648 best DB hits: BLAST: embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=2e-27 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=2e-27 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=7e-27 COG: aslA; COG3119 Arylsulfatase A and related enzymes; E=9e-22 PFAM: PF00884; Sulfatase; E=1.5e-55; arylsulphatase A 4916001 arsA 1791531 arsA Rhodopirellula baltica SH 1 arylsulphatase A NP_868753.1 4914631 R 243090 CDS NP_868754.1 32475760 1795388 complement(4916023..4916592) 1 NC_005027.1 hypothetical protein 4916592 1795388 RB9195 Rhodopirellula baltica SH 1 hypothetical protein NP_868754.1 4916023 R 243090 CDS NP_868755.1 32475761 1797207 4916635..4917975 1 NC_005027.1 best DB hits: BLAST: pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=1e-05 embl:CAB94634.1; (AL359215) secreted glycosyl hydrolase.; E=1e-04; secreted glycosyl hydrolase 4917975 1797207 RB9196 Rhodopirellula baltica SH 1 secreted glycosyl hydrolase NP_868755.1 4916635 D 243090 CDS NP_868756.1 32475762 1791632 4918018..4918140 1 NC_005027.1 hypothetical protein 4918140 1791632 RB9197 Rhodopirellula baltica SH 1 hypothetical protein NP_868756.1 4918018 D 243090 CDS NP_868757.1 32475763 1792390 4918032..4918208 1 NC_005027.1 hypothetical protein 4918208 1792390 RB9198 Rhodopirellula baltica SH 1 hypothetical protein NP_868757.1 4918032 D 243090 CDS NP_868758.1 32475764 1794936 complement(4918120..4918323) 1 NC_005027.1 hypothetical protein 4918323 1794936 RB9199 Rhodopirellula baltica SH 1 hypothetical protein NP_868758.1 4918120 R 243090 CDS NP_868759.1 32475765 1791522 complement(4918369..4919220) 1 NC_005027.1 PMID: 97000351 PMID: 99411980 PMID: 2668691 PMID: 2190615 best DB hits: BLAST: embl:CAB65573.1; (AL136058) probable; E=1e-51 ddbj:BAB07147.1; (AP001518) p-nitrophenyl phosphatase [Bacillus; E=4e-43 swissprot:P15302; NAGD_ECOLI NAGD PROTEIN ----- pir: B64802; E=6e-42 COG: BH3428; COG0647 Predicted sugar phosphatases of the HAD superfamily; E=4e-44 VNG0719G; COG0647 Predicted sugar phosphatases of the HAD; E=7e-31 BH1074; COG0647 Predicted sugar phosphatases of the HAD superfamily; E=2e-24 PFAM: PF00702; haloacid dehalogenase-like hydr; E=2.9e-14; N-acetylglucosamine-6-phoshatase or p-nitrophenyl phosphatase 4919220 nagD 1791522 nagD Rhodopirellula baltica SH 1 N-acetylglucosamine-6-phoshatase or p-nitrophenyl phosphatase NP_868759.1 4918369 R 243090 CDS NP_868760.1 32475766 1792720 complement(4919456..4925596) 1 NC_005027.1 best DB hits: BLAST: pir:E72310; hypothetical protein - Thermotoga maritima (strain MSB8); E=8e-06 pir:F83085; conserved hypothetical protein PA4489 [imported] -; E=9e-06 ddbj:BAA12317.1; (D84339) murinoglobulin [Cavia porcellus]; E=9e-05 COG: TM0984; COG2373 Large extracellular alpha-helical protein; E=8e-07; hypothetical protein 4925596 1792720 RB9201 Rhodopirellula baltica SH 1 hypothetical protein NP_868760.1 4919456 R 243090 CDS NP_868761.1 32475767 1795813 4925661..4926506 1 NC_005027.1 PMID: 9163424 best DB hits: BLAST: swissprot:P55478; Y4HK_RHISN HYPOTHETICAL 25.4 KD PROTEIN Y4HK; E=8e-07 gb:AAG60981.1; AF322013_100 (AF322013) ID687 [Bradyrhizobium; E=2e-04 PFAM: PF02056; Family 4 glycosyl hydrolase; E=0.31 PF01925; Domain of unknown function DUF8; E=0.00091; hypothetical protein 4926506 1795813 RB9208 Rhodopirellula baltica SH 1 hypothetical protein NP_868761.1 4925661 D 243090 CDS NP_868762.1 32475768 1793265 complement(4926525..4927712) 1 NC_005027.1 PMID: 8663056 PMID: 10600118 PMID: iscS best DB hits: BLAST: pir:E81852; NifS-like aminotranfserase NMA1594 [imported] -; E=1e-63 gb:AAF62329.1; (AE002486) nifS protein [Neisseria meningitidis; E=9e-63 pir:A71652; iron-sulfur cofactor synthesis protein RP486 -; E=1e-60 COG: NMB1379; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; E=8e-64 PFAM: PF00266; Aminotransferase class-V; E=3.4e-70; NifS-like aminotranfserase- cysteine desulfurase 4927712 nifS 1793265 nifS Rhodopirellula baltica SH 1 NifS-like aminotranfserase- cysteine desulfurase NP_868762.1 4926525 R 243090 CDS NP_868763.1 32475769 1794843 complement(4927739..4928980) 1 NC_005027.1 PMID: 9469931 best DB hits: BLAST: swissprot:P00639; DRN1_BOVIN DEOXYRIBONUCLEASE I PRECURSOR (DNASE; E=6e-11 pdb:3DNI; Deoxyribonuclease I (Dnase I) (E.C.3.1.21.1) -----; E=6e-11 pdb:1ATN; D Chain D, Deoxyribonuclease I Complex With Actin; E=9e-11 PFAM: PF01181; Deoxyribonuclease I (DNase I); E=0.053; deoxyribonuclease I precursor (DNase I) 4928980 dnl1 1794843 dnl1 Rhodopirellula baltica SH 1 deoxyribonuclease I precursor (DNase I) NP_868763.1 4927739 R 243090 CDS NP_868764.1 32475770 1791478 4929311..4930618 1 NC_005027.1 PMID: 9823893 best DB hits: BLAST: swissprot:Q9ZDY4; ODO2_RICPR DIHYDROLIPOAMIDE SUCCINYLTRANSFERASE; E=4e-93 pir:S42875; dihydrolipoamide S-succinyltransferase (EC 2.3.1.61) -; E=7e-92 swissprot:P52993; ODO2_ALCEU DIHYDROLIPOAMIDE SUCCINYLTRANSFERASE; E=7e-92 COG: RP179; COG0508 Dihydrolipoamide acyltransferases; E=4e-94 PFAM: PF00364; Biotin-requiring enzyme; E=5e-17 PF02817; e3 binding domain; E=1.8e-14 PF00198; 2-oxo acid dehydrogenases acylt; E=2.2e-96; dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex 4930618 sucB 1791478 sucB Rhodopirellula baltica SH 1 dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex NP_868764.1 4929311 D 243090 CDS NP_868765.1 32475771 1790227 complement(4930706..4931395) 1 NC_005027.1 PMID: 1830053 best DB hits: BLAST: ddbj:BAA86537.1; (AB033049) KIAA1223 protein [Homo sapiens]; E=5e-12 gb:AAF56803.1; (AE003766) CG10011 gene product [Drosophila; E=5e-12 pir:T25412; hypothetical protein T28D6.4 - Caenorhabditis elegans; E=1e-11 COG: XF1640; COG0666 Ankyrin repeat proteins; E=2e-07 PFAM: PF00023; Ank repeat; E=0.00059; ankyrin repeat-containing protein 4931395 ank2 1790227 ank2 Rhodopirellula baltica SH 1 ankyrin repeat-containing protein NP_868765.1 4930706 R 243090 CDS NP_868766.1 32475772 1795178 complement(4931428..4932162) 1 NC_005027.1 best DB hits: BLAST: pir:F70418; conserved hypothetical protein aq_1365 - Aquifex; E=9e-24 embl:CAB94036.1; (AL358652) conserved hypothetical protein; E=6e-21 gb:AAB90387.1; (AE001045) conserved hypothetical protein; E=6e-19 COG: aq_1365_1; COG0062 Uncharacterized ACR; E=5e-22; hypothetical protein 4932162 1795178 RB9218 Rhodopirellula baltica SH 1 hypothetical protein NP_868766.1 4931428 R 243090 CDS NP_868767.1 32475773 1792916 complement(4932047..4932877) 1 NC_005027.1 hypothetical protein 4932877 1792916 RB9220 Rhodopirellula baltica SH 1 hypothetical protein NP_868767.1 4932047 R 243090 CDS NP_868768.1 32475774 1795290 4932617..4934044 1 NC_005027.1 PMID: 11761711 PMID: 8606151 best DB hits: BLAST: gb:AAK01318.1; (AF190580) MucD [Pseudomonas syringae pv.; E=0.010 gb:AAB01513.1; (U30799) MucD [Azotobacter vinelandii]; E=0.087 pir:F83550; serine proteinase MucD precursor PA0766 [imported] -; E=0.50 PFAM: PF00595; PDZ domain (Also known as DHR or; E=7.1e-05; MucD- a secreted serine proteinase 4934044 mucD 1795290 mucD Rhodopirellula baltica SH 1 MucD- a secreted serine proteinase NP_868768.1 4932617 D 243090 CDS NP_868769.1 32475775 1790765 complement(4934175..4934600) 1 NC_005027.1 hypothetical protein 4934600 1790765 RB9226 Rhodopirellula baltica SH 1 hypothetical protein NP_868769.1 4934175 R 243090 CDS NP_868770.1 32475776 1796447 complement(4934332..4934649) 1 NC_005027.1 PMID: 9990318 best DB hits: BLAST: swissprot:P39405; FHUF_ECOLI FERRIC IRON REDUCTase FHUF; E=0.82 gb:AAG59550.1; AE005668_5 (AE005668) orf, hypothetical protein; E=0.85; ferric iron reductase fhuF 4934649 1796447 RB9227 Rhodopirellula baltica SH 1 ferric iron reductase fhuF NP_868770.1 4934332 R 243090 CDS NP_868771.1 32475777 1794274 4934679..4936592 1 NC_005027.1 hypothetical protein 4936592 1794274 RB9228 Rhodopirellula baltica SH 1 hypothetical protein NP_868771.1 4934679 D 243090 CDS NP_868772.1 32475778 1795788 4936673..4936996 1 NC_005027.1 hypothetical protein 4936996 1795788 RB9230 Rhodopirellula baltica SH 1 hypothetical protein NP_868772.1 4936673 D 243090 CDS NP_868773.1 32475779 1795952 complement(4936679..4937008) 1 NC_005027.1 hypothetical protein 4937008 1795952 RB9231 Rhodopirellula baltica SH 1 hypothetical protein NP_868773.1 4936679 R 243090 CDS NP_868774.1 32475780 1796453 4937011..4937940 1 NC_005027.1 best DB hits: BLAST: embl:CAB93418.1; (AL357524) transposase [Streptomyces; E=0.60; transposase 4937940 1796453 RB9232 Rhodopirellula baltica SH 1 transposase NP_868774.1 4937011 D 243090 CDS NP_868775.1 32475781 1791584 4938001..4938246 1 NC_005027.1 signal peptide 4938246 1791584 RB9233 Rhodopirellula baltica SH 1 signal peptide NP_868775.1 4938001 D 243090 CDS NP_868776.1 32475782 1791530 4938435..4939232 1 NC_005027.1 PMID: 9163424 best DB hits: BLAST: swissprot:P55473; NOEI_RHISN NODULATION PROTEIN NOEI ----- gb:; E=0.004 gb:AAF67136.1; AF228683_3 (AF228683) nodulation protein NoeI; E=0.006 pir:S73065; u0002kb protein - Mycobacterium tuberculosis -----; E=0.014 COG: sll1456; COG0500 SAM-dependent methyltransferases; E=0.003; nodulation protein noeI- methyltransferase 4939232 noeI 1791530 noeI Rhodopirellula baltica SH 1 nodulation protein noeI- methyltransferase NP_868776.1 4938435 D 243090 CDS NP_868777.1 32475783 1795160 4939229..4939393 1 NC_005027.1 hypothetical protein 4939393 1795160 RB9236 Rhodopirellula baltica SH 1 hypothetical protein NP_868777.1 4939229 D 243090 CDS NP_868778.1 32475784 1796545 4939360..4940193 1 NC_005027.1 PMID: 20127862 PMID: 10350455 best DB hits: BLAST: pir:B81318; probable two-domain glycosyltransferase Cj1135; E=1e-20 gb:AAF34140.1; (AF167344) glycosyltransferase [Campylobacter; E=2e-13 gb:AAG43975.1; AF215659_3 (AF215659) glycosyltransferase; E=2e-13 COG: Cj1135; COG0463 Glycosyltransferases involved in cell wall; E=1e-21 aq_1407; COG1215 Glycosyltransferases, probably involved in cell; E=0.010 PFAM: PF00535; Glycosyl transferase; E=2.8e-19; glycosyltransferase 4940193 1796545 RB9237 Rhodopirellula baltica SH 1 glycosyltransferase NP_868778.1 4939360 D 243090 CDS NP_868779.1 32475785 1790375 4940193..4941143 1 NC_005027.1 PMID: 10377135 PMID: 99195826 PMID: 7721792 best DB hits: BLAST: pir:T44328; hypothetical protein wblA [imported] - Vibrio cholerae; E=7e-32 gb:AAD40713.1; AF048749_9 (AF048749) fucosyl transferase; E=1e-18 gb:AAD29863.1; (AF093828) alpha-1,2-fucosyltransferase; E=2e-18 PFAM: PF01531; Glycosyl transferase 1; E=2.2e-16; fucosyl transferase 4941143 fucT2 1790375 fucT2 Rhodopirellula baltica SH 1 fucosyl transferase NP_868779.1 4940193 D 243090 CDS NP_868780.1 32475786 1790433 4941209..4941904 1 NC_005027.1 best DB hits: BLAST: pir:D70714; hypothetical protein Rv1513 - Mycobacterium tuberculosis; E=2e-04 pir:S73065; u0002kb protein - Mycobacterium tuberculosis -----; E=0.021 embl:CAA11577.1; (AJ223833) gsc [Mycobacterium avium subsp.; E=0.080; hypothetical protein 4941904 1790433 RB9239 Rhodopirellula baltica SH 1 hypothetical protein NP_868780.1 4941209 D 243090 CDS NP_868781.1 32475787 1791016 4941959..4942762 1 NC_005027.1 best DB hits: BLAST: pir:E83602; hypothetical protein PA0343 [imported] - Pseudomonas; E=4e-07 pir:C82785; hypothetical protein XF0607 [imported] - Xylella; E=0.17 gb:AAF86398.1; AF235504_19 (AF235504) FkbM [Streptomyces; E=0.73; hypothetical protein 4942762 1791016 RB9241 Rhodopirellula baltica SH 1 hypothetical protein NP_868781.1 4941959 D 243090 CDS NP_868782.1 32475788 1792991 complement(4942873..4943853) 1 NC_005027.1 best DB hits: PFAM: PF01668; SmpB protein; E=0.84 PF00535; Glycosyl transferase; E=0.029; glycosyltransferase 4943853 1792991 RB9243 Rhodopirellula baltica SH 1 glycosyltransferase NP_868782.1 4942873 R 243090 CDS NP_868783.1 32475789 1791609 complement(4944047..4945117) 1 NC_005027.1 PMID: 11371519 PMID: 97315213 best DB hits: BLAST: gb:AAD37767.1; AF146532_7 (AF146532) heptosyl III; E=9e-13 gb:AAK03386.1; (AE006169) OpsX [Pasteurella multocida]; E=3e-07 embl:CAA07672.1; (AJ007747) heptosyltransferase; E=5e-07 COG: HI0261; COG0859 ADP-heptose:LPS heptosyltransferase; E=3e-07 PFAM: PF01075; Glycosyltransferase 9 (; E=6.9e-06; heptosyl III transferase 4945117 waaQ 1791609 waaQ Rhodopirellula baltica SH 1 heptosyl III transferase NP_868783.1 4944047 R 243090 CDS NP_868784.1 32475790 1792091 complement(4945139..4947571) 1 NC_005027.1 hypothetical protein 4947571 1792091 RB9249 Rhodopirellula baltica SH 1 hypothetical protein NP_868784.1 4945139 R 243090 CDS NP_868785.1 32475791 1792294 4947533..4949536 1 NC_005027.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 4949536 gidA 1792294 gidA Rhodopirellula baltica SH 1 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA NP_868785.1 4947533 D 243090 CDS NP_868786.1 32475792 1795073 4949533..4950621 1 NC_005027.1 best DB hits: BLAST: pir:C83451; conserved hypothetical protein PA1563 [imported] -; E=0.089 pir:A82768; conserved hypothetical protein XF0748 [imported] -; E=0.11 COG: PA1563; COG2933 Predicted SAM-dependent methyltransferase; E=0.008; SAM-depedent methyltransferase 4950621 1795073 RB9256 Rhodopirellula baltica SH 1 SAM-depedent methyltransferase NP_868786.1 4949533 D 243090 CDS NP_868787.1 32475793 1796288 4951242..4952522 1 NC_005027.1 PMID: 9884231 best DB hits: BLAST: embl:CAA06650.1; (AJ005645) sdrc [Staphylococcus aureus]; E=0.21; SD repeat-containing protein 4952522 1796288 RB9260 Rhodopirellula baltica SH 1 SD repeat-containing protein NP_868787.1 4951242 D 243090 CDS NP_868788.1 32475794 1790092 4952589..4953827 1 NC_005027.1 best DB hits: BLAST: ddbj:BAA37082.1; (AB022095) ORF2 [Streptomyces griseus]; E=5e-45 embl:CAC04221.1; (AL391515) conserved hypothetical protein; E=9e-35 pir:G69070; coenzyme F390 synthetase I - Methanobacterium; E=0.004 COG: MTH1528; COG1541 Coenzyme F390 synthetase; E=4e-04 PFAM: PF00031; Cystatin domain; E=0.0015; hypothetical protein 4953827 1790092 RB9261 Rhodopirellula baltica SH 1 hypothetical protein NP_868788.1 4952589 D 243090 CDS NP_868789.1 32475795 1793730 4953841..4955331 1 NC_005027.1 best DB hits: BLAST: embl:CAC04220.1; (AL391515) conserved hypothetical protein; E=1e-21 ddbj:BAA37083.1; (AB022095) ORF3 [Streptomyces griseus]; E=8e-13 pir:E70961; hypothetical protein Rv0223c - Mycobacterium; E=4e-06 COG: Rv0223c; COG1012 NAD-dependent aldehyde dehydrogenases; E=3e-07 PFAM: PF00171; Aldehyde dehydrogenase; E=0.21; NAD-dependent aldehyde dehydrogenase 4955331 1793730 RB9262 Rhodopirellula baltica SH 1 NAD-dependent aldehyde dehydrogenase NP_868789.1 4953841 D 243090 CDS NP_868790.1 32475796 1795799 4955344..4955742 1 NC_005027.1 hypothetical protein 4955742 1795799 RB9266 Rhodopirellula baltica SH 1 hypothetical protein NP_868790.1 4955344 D 243090 CDS NP_868791.1 32475797 1797154 4955675..4955920 1 NC_005027.1 best DB hits: BLAST: pir:A72347; hypothetical protein TM0675 - Thermotoga maritima; E=1e-08 ddbj:BAB06167.1; (AP001515) BH2448~unknown conserved protein in; E=4e-05 pir:B70135; flagellar protein (flbD) homolog - Lyme disease; E=3e-04 COG: TM0675; COG1582 Uncharacterized protein, possibly involved in; E=1e-09; flagellar protein (flbD)-like protein 4955920 flbD 1797154 flbD Rhodopirellula baltica SH 1 flagellar protein (flbD)-like protein NP_868791.1 4955675 D 243090 CDS NP_868792.1 32475798 1794107 4955939..4956700 1 NC_005027.1 PMID: 99254111 best DB hits: BLAST: swissprot:P46826; YTXD_BACME HYPOTHETICAL 29.3 KD PROTEIN IN CCPA; E=9e-35 swissprot:O06873; POMA_VIBAL CHEMOTAXIS POMA PROTEIN -----; E=2e-31 gb:AAD15904.1; (AF069391) sodium-driven polar flagellar protein; E=3e-31 COG: BS_ytxD; COG1291 Flagellar motor component; E=5e-32 PFAM: PF01618; MotA/TolQ/ExbB proton channel famil; E=0.0002; chemotaxis pomA protein 4956700 pomA 1794107 pomA Rhodopirellula baltica SH 1 chemotaxis pomA protein NP_868792.1 4955939 D 243090 CDS NP_868793.1 32475799 1793200 4956700..4957455 1 NC_005027.1 PMID: 7934817 PMID: 9387221 PMID: 1447140 best DB hits: BLAST: swissprot:P39064; YTXE_BACSU HYPOTHETICAL 27.6 KD PROTEIN IN ACUC; E=2e-10 gb:AAB94398.1; (U91841) MotB homolog [Bacillus firmus]; E=3e-09 ddbj:BAB06958.1; (AP001518) BH3239~unknown conserved protein; E=2e-07 COG: BS_ytxE; COG1360 Flagellar motor protein; E=2e-11 PA0973; COG2885 Outer membrane protein and related; E=5e-05 PFAM: PF00691; OmpA family; E=1.4e-11; MotB-like protein 4957455 motB 1793200 motB Rhodopirellula baltica SH 1 MotB-like protein NP_868793.1 4956700 D 243090 CDS NP_868794.1 32475800 1794148 4957465..4958022 1 NC_005027.1 PMID: 10368162 best DB hits: BLAST: gb:AAC05584.1; (AF006075) dihydrolipoamide acetyltransferase; E=0.090 swissprot:O31550; ACOC_BACSU DIHYDROLIPOAMIDE ACETYLTRANSFERASE; E=0.090 COG: BS_acoC; COG0508 Dihydrolipoamide acyltransferases; E=0.009; dihydrolipoamide acetyltransferase 4958022 1794148 RB9273 Rhodopirellula baltica SH 1 dihydrolipoamide acetyltransferase NP_868794.1 4957465 D 243090 CDS NP_868795.1 32475801 1793904 4958039..4958464 1 NC_005027.1 PMID: 2656645 PMID: 2651416 best DB hits: BLAST: swissprot:P35539; FLIN_ERWCA FLAGELLAR MOTOR SWITCH PROTEIN FLIN; E=5e-16 swissprot:P24073; FLIY_BACSU FLAGELLAR MOTOR SWITCH PROTEIN FLIY; E=8e-16 swissprot:P26419; FLIN_SALTY FLAGELLAR MOTOR SWITCH PROTEIN FLIN; E=2e-15 COG: BS_fliY_2; COG1886 Flagellar motor switch/type III secretory pathway; E=6e-17 PFAM: PF01052; Surface presentation of antigens (SP; E=2.5e-25; flagellar motor switch protein fliN (fragment) 4958464 fliN 1793904 fliN Rhodopirellula baltica SH 1 flagellar motor switch protein fliN (fragment) NP_868795.1 4958039 D 243090 CDS NP_868796.1 32475802 1794631 4958461..4959162 1 NC_005027.1 best DB hits: BLAST: swissprot:P49080; AKH2_MAIZE BIFUNCTIONAL ASPARTOKINASEHOMOSERINE; E=0.43; bifunctional aspartokinase/homoserine dehydrogenase 2 4959162 1794631 RB9276 Rhodopirellula baltica SH 1 bifunctional aspartokinase/homoserine dehydrogenase 2 NP_868796.1 4958461 D 243090 CDS NP_868797.1 32475803 1795049 complement(4959131..4961644) 1 NC_005027.1 PMID: 7813451 PMID: 2668276 best DB hits: BLAST: pir:A83065; hypothetical protein PA4657 [imported] - Pseudomonas; E=4e-47 swissprot:P12769; PHR_METTH DEOXYRIBODIPYRIMIDINE PHOTOLYASE (DNA; E=6e-41 swissprot:P34205; PHR_CARAU DEOXYRIBODIPYRIMIDINE PHOTOLYASE (DNA; E=4e-37 COG: PA4657; COG3380 Predicted NAD/FAD-dependent oxidoreductase; E=3e-48 MTH904; COG0415 Deoxyribodipyrimidine photolyase; E=5e-42 sll1135; COG3380 Predicted NAD/FAD-dependent oxidoreductase; E=1e-21 PFAM: PF00875; DNA photolyase; E=6.3e-06 PF02254; KTN NAD-binding domain; E=0.19 PF01266; D-amino acid oxidase; E=0.0088; deoxyribodipyrimidine photolyase 4961644 phr 1795049 phr Rhodopirellula baltica SH 1 deoxyribodipyrimidine photolyase NP_868797.1 4959131 R 243090 CDS NP_868798.1 32475804 1794582 complement(4961732..4963150) 1 NC_005027.1 PMID: 97227932 PMID: 1594600 best DB hits: BLAST: pir:T35402; probable phytoene dehydrogenase - Streptomyces; E=7e-25 pir:T10701; probable phytoene dehydrogenase (EC 1.3.-.-) - green; E=3e-18 embl:CAA60479.1; (X86783) Phytoene desaturase [Haematococcus; E=1e-15 COG: slr1254; COG3349 Uncharacterized ACR; E=5e-14 PFAM: PF01593; Flavin containing amine oxidase; E=0.51 PF01494; FAD binding domain; E=0.00029 PF01266; D-amino acid oxidase; E=0.019; phytoene dehydrogenase 4963150 pds 1794582 pds Rhodopirellula baltica SH 1 phytoene dehydrogenase NP_868798.1 4961732 R 243090 CDS NP_868799.1 32475805 1792814 complement(4963147..4964157) 1 NC_005027.1 PMID: 1537409 best DB hits: BLAST: pir:T35400; probable phytoene synthase - Streptomyces coelicolor; E=5e-25 pir:A81118; phytoene synthase, probable NMB1130, NMB1168 [imported]; E=3e-21 swissprot:P37269; CRTB_SYNP7 PHYTOENE SYNTHASE ----- pir:; E=5e-21 COG: NMB1130; COG1562 Phytoene/squalene synthetase; E=3e-22 PFAM: PF00494; Squalene/phytoene synthase; E=0.0026; phytoene synthase 4964157 crtB 1792814 crtB Rhodopirellula baltica SH 1 phytoene synthase NP_868799.1 4963147 R 243090 CDS NP_868800.1 32475806 1792722 complement(4964154..4965053) 1 NC_005027.1 PMID: 20175755 PMID: 1537409 best DB hits: BLAST: pir:H81074; phytoene synthase-related protein NMB1521 [imported] -; E=6e-38 pir:D81868; probable transferase NMA1721 [imported] - Neisseria; E=2e-37 pir:T35399; probable phytoene synthase - Streptomyces coelicolor; E=2e-25 COG: NMB1521; COG1562 Phytoene/squalene synthetase; E=5e-39 PFAM: PF00494; Squalene/phytoene synthase; E=2.8e-23; phytoene synthase 4965053 ctrB 1792722 ctrB Rhodopirellula baltica SH 1 phytoene synthase NP_868800.1 4964154 R 243090 CDS NP_868801.1 32475807 1796398 4965373..4966332 1 NC_005027.1 PMID: 11818558 best DB hits: BLAST: pir:G83076; LytB protein PA4557 [imported] - Pseudomonas aeruginosa; E=4e-81 gb:AAD55804.1; (AF027189) LytB [Acinetobacter sp. BD413]; E=1e-80 pir:G82293; lytB protein VC0685 [imported] - Vibrio cholerae (group; E=7e-77 COG: PA4557; COG0761 Penicillin tolerance protein; E=4e-82 PFAM: PF02401; LytB protein; E=2.4e-132; LytB protein 4966332 lytB 1796398 lytB Rhodopirellula baltica SH 1 LytB protein NP_868801.1 4965373 D 243090 CDS NP_868802.1 32475808 1794622 complement(4966456..4969701) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAA91540.1; (AK001182) unnamed protein product [Homo sapiens]; E=9e-08 embl:CAB98267.1; (AJ276171) ASPIC [Homo sapiens]; E=1e-07 embl:CAB98268.1; (AJ276171) ASPIC [Homo sapiens] ----- embl:; E=1e-07 COG: nfrA; COG0457 TPR-repeat-containing proteins; E=0.002; hypothetical protein 4969701 1794622 RB9289 Rhodopirellula baltica SH 1 hypothetical protein NP_868802.1 4966456 R 243090 CDS NP_868803.1 32475809 1791423 complement(4969727..4971928) 1 NC_005027.1 PMID: 97061201 PMID: 10333591 PMID: 10669803 best DB hits: BLAST: pir:S77094; glycogen operon protein (EC 3.2.1.-) glgX-2 -; E=1e-149 pir:S74546; glycogen operon protein (EC 3.2.1.-) glgX-1 -; E=1e-139 embl:CAB92884.1; (AL356932) glycogen debranching enzyme.; E=1e-136 COG: slr1857; COG1523 Pullulanase and related glycosidases; E=1e-151 DR0464; COG0296 1,4-alpha-glucan branching enzyme; E=3e-17 DR0405; COG1523 Pullulanase and related glycosidases; E=3e-12 PFAM: PF02922; Isoamylase N-terminal domain; E=1.3e-22 PF00128; Alpha amylase, catalytic domain; E=9.7e-21; glycogen operon protein glgX-2 4971928 glgX 1791423 glgX Rhodopirellula baltica SH 1 glycogen operon protein glgX-2 NP_868803.1 4969727 R 243090 CDS NP_868804.1 32475810 1793847 complement(4972084..4972386) 1 NC_005027.1 hypothetical protein 4972386 1793847 RB9294 Rhodopirellula baltica SH 1 hypothetical protein NP_868804.1 4972084 R 243090 CDS NP_868805.1 32475811 1797215 4972307..4972768 1 NC_005027.1 hypothetical protein 4972768 1797215 RB9296 Rhodopirellula baltica SH 1 hypothetical protein NP_868805.1 4972307 D 243090 CDS NP_868806.1 32475812 1794184 complement(4972886..4973878) 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein 4973878 1794184 RB9298 Rhodopirellula baltica SH 1 hypothetical protein NP_868806.1 4972886 R 243090 CDS NP_868807.1 32475813 1795579 complement(4974088..4974270) 1 NC_005027.1 hypothetical protein 4974270 1795579 RB9301 Rhodopirellula baltica SH 1 hypothetical protein NP_868807.1 4974088 R 243090 CDS NP_868808.1 32475814 1796982 4974378..4974623 1 NC_005027.1 PMID: 339950 best DB hits: BLAST: pir:C81433; 50S ribosomal protein L31 Cj0155c [imported] -; E=2e-17 swissprot:O66075; RL31_TREPA 50S RIBOSOMAL PROTEIN L31 -----; E=9e-17 swissprot:P45834; RL31_MYCLE 50S RIBOSOMAL PROTEIN L31 -----; E=5e-16 COG: Cj0155c; COG0254 Ribosomal protein L31; E=2e-18 PFAM: PF01197; Ribosomal protein L31; E=1.6e-37; 50S ribosomal protein L31 4974623 rpmE 1796982 rpmE Rhodopirellula baltica SH 1 50S ribosomal protein L31 NP_868808.1 4974378 D 243090 CDS NP_868809.1 32475815 1796091 4974620..4975702 1 NC_005027.1 PMID: 9353933 PMID: 8662205 best DB hits: BLAST: swissprot:P45872; RF1_BACSU PEPTIDE CHAIN RELEASE FACTOR 1 (RF-1); E=1e-80 swissprot:P43917; RF1_HAEIN PEPTIDE CHAIN RELEASE FACTOR 1 (RF-1); E=2e-79 gb:AAK02639.1; (AE006091) PrfA [Pasteurella multocida]; E=6e-79 COG: BS_prfA; COG0216 Protein chain release factor A; E=1e-81 PFAM: PF00472; Peptidyl-tRNA hydrolase domain; E=2.2e-66; peptide chain release factor 1 4975702 prfA 1796091 prfA Rhodopirellula baltica SH 1 peptide chain release factor 1 NP_868809.1 4974620 D 243090 CDS NP_868810.1 32475816 1795947 4975706..4976596 1 NC_005027.1 PMID: 11805295 best DB hits: BLAST: pir:A82109; hemK protein VC2178 [imported] - Vibrio cholerae (group; E=4e-33 ddbj:BAB07493.1; (AP001519) protoporphyrinogen oxidase [Bacillus; E=7e-33 swissprot:P45873; HEMK_BACSU HEMK PROTEIN HOMOLOG ----- pir:; E=8e-32 COG: VC2178; COG2890 Predicted rRNA or tRNA methylase; E=4e-34 PFAM: PF02390; methyltransferase; E=0.19; hemK protein 4976596 hemK 1795947 hemK Rhodopirellula baltica SH 1 hemK protein NP_868810.1 4975706 D 243090 CDS NP_868811.1 32475817 1791652 4976727..4976945 1 NC_005027.1 hypothetical protein 4976945 1791652 RB9307 Rhodopirellula baltica SH 1 hypothetical protein NP_868811.1 4976727 D 243090 CDS NP_868812.1 32475818 1795245 complement(4976960..4978849) 1 NC_005027.1 best DB hits: PFAM: PF02321; Outer membrane efflux protein; E=5.8e-06; hypothetical protein 4978849 1795245 RB9308 Rhodopirellula baltica SH 1 hypothetical protein NP_868812.1 4976960 R 243090 CDS NP_868813.1 32475819 1790334 4978793..4979035 1 NC_005027.1 hypothetical protein 4979035 1790334 RB9310 Rhodopirellula baltica SH 1 hypothetical protein NP_868813.1 4978793 D 243090 CDS NP_868814.1 32475820 1792718 4979077..4980462 1 NC_005027.1 best DB hits: PFAM: PF00364; Biotin-requiring enzyme; E=0.13 PF02749; Quinolinate phosphoribosyl tran; E=0.19; hypothetical protein 4980462 1792718 RB9311 Rhodopirellula baltica SH 1 hypothetical protein NP_868814.1 4979077 D 243090 CDS NP_868815.1 32475821 1793845 4980456..4981586 1 NC_005027.1 PMID: 11004187 best DB hits: BLAST: swissprot:P77239; YLCD_ECOLI HYPOTHETICAL 44.3 KDA PROTEIN IN; E=0.003 gb:AAG54907.1; AE005237_3 (AE005237) resistance protein; E=0.003 pir:A72386; conserved hypothetical protein - Thermotoga maritima; E=0.037 COG: ylcD; COG0845 Membrane-fusion protein; E=3e-04 PFAM: PF00364; Biotin-requiring enzyme; E=0.0042 PF00529; HlyD family secretion protein; E=0.005 PF00364; Biotin-requiring enzyme; E=0.0068; copper efflux system protein cusB (precursor) 4981586 1793845 RB9313 Rhodopirellula baltica SH 1 copper efflux system protein cusB (precursor) NP_868815.1 4980456 D 243090 CDS NP_868816.1 32475822 1796298 4981583..4983793 1 NC_005027.1 best DB hits: BLAST: pir:G82300; conserved hypothetical protein VC0628 [imported] -; E=0.002 pir:F70091; hypothetical protein yydH - Bacillus subtilis -----; E=0.14 pir:D70385; hypothetical protein aq_986 - Aquifex aeolicus -----; E=0.31 COG: VC0628; COG0845 Membrane-fusion protein; E=2e-04 PFAM: PF02163; Sterol-regulatory element bindi; E=6.4e-05; hypothetical protein 4983793 1796298 RB9315 Rhodopirellula baltica SH 1 hypothetical protein NP_868816.1 4981583 D 243090 CDS NP_868817.1 32475823 1791527 complement(4983811..4989579) 1 NC_005027.1 PMID: 99000809 PMID: 97000351 best DB hits: BLAST: pir:G71532; probable threoninetyrosine-specific protein kinase (EC; E=4e-30 gb:AAF73573.1; (AE002326) serinethreonine protein kinase; E=3e-27 embl:CAB45034.1; (AL078635) WD-repeat containing protein; E=3e-26 COG: CT301_1; COG0515 Serine/threonine protein kinases; E=3e-31 sll0163; COG2319 WD40 repeat protein; E=1e-19 Rv1266c; COG0515 Serine/threonine protein kinases; E=1e-19 PFAM: PF00069; Protein kinase domain; E=1.1e-26 PF00400; WD domain, G-beta repeat; E=7.5e-06; threonine/tyrosine-specific protein kinase 4989579 1791527 RB9317 Rhodopirellula baltica SH 1 threonine/tyrosine-specific protein kinase NP_868817.1 4983811 R 243090 CDS NP_868818.1 32475824 1792543 complement(4989569..4992178) 1 NC_005027.1 best DB hits: PFAM: PF00956; Nucleosome assembly protein (NAP); E=0.78; hypothetical protein 4992178 1792543 RB9320 Rhodopirellula baltica SH 1 hypothetical protein NP_868818.1 4989569 R 243090 CDS NP_868819.1 32475825 1796913 complement(4992331..4992459) 1 NC_005027.1 hypothetical protein 4992459 1796913 RB9322 Rhodopirellula baltica SH 1 hypothetical protein NP_868819.1 4992331 R 243090 CDS NP_868820.1 32475826 1797155 4992474..4993277 1 NC_005027.1 signal peptide 4993277 1797155 RB9324 Rhodopirellula baltica SH 1 signal peptide NP_868820.1 4992474 D 243090 CDS NP_868821.1 32475827 1796069 4993426..4994358 1 NC_005027.1 PMID: 20222556 best DB hits: BLAST: pir:H81856; hypothetical protein NMA1628 [imported] - Neisseria; E=1e-17 pir:C81085; conserved hypothetical protein NMB1417 [imported] -; E=4e-17 embl:CAC01390.1; (AJ131360) WlaX protein [Campylobacter jejuni]; E=7e-17 COG: NMB1417; COG3298 Predicted 3'-5' exonuclease related to the; E=4e-18; hypothetical protein 4994358 1796069 RB9326 Rhodopirellula baltica SH 1 hypothetical protein NP_868821.1 4993426 D 243090 CDS NP_868822.1 32475828 1792322 4994375..4995406 1 NC_005027.1 hypothetical protein 4995406 1792322 RB9327 Rhodopirellula baltica SH 1 hypothetical protein NP_868822.1 4994375 D 243090 CDS NP_868823.1 32475829 1794783 4995491..4996729 1 NC_005027.1 best DB hits: BLAST: embl:CAB45034.1; (AL078635) WD-repeat containing protein; E=1e-12 swissprot:Q00808; HET1_PODAN VEGETATIBLE INCOMPATIBILITY PROTEIN; E=5e-12 gb:AAG40737.1; AF299085_1 (AF299085) Bap1 [Myxococcus xanthus]; E=3e-09 COG: slr0143_2; COG2319 WD40 repeat protein; E=2e-09 PFAM: PF00400; WD domain, G-beta repeat; E=0.87; hypothetical protein 4996729 1794783 RB9329 Rhodopirellula baltica SH 1 hypothetical protein NP_868823.1 4995491 D 243090 CDS NP_868824.1 32475830 1794468 4996801..5002071 1 NC_005027.1 PMID: 99098700 PMID: 98261511 best DB hits: BLAST: pir:T28679; fibrinogen-binding protein homolog - Staphylococcus aureus; E=9e-46 gb:AAF72509.1; AF245041_1 (AF245041) cell-surface adhesin; E=1e-37 embl:CAB75732.1; (Y18653) bone sialoprotein-binding protein; E=6e-24; fibrinogen-binding protein 5002071 1794468 RB9330 Rhodopirellula baltica SH 1 fibrinogen-binding protein NP_868824.1 4996801 D 243090 CDS NP_868825.1 32475831 1790074 5002119..5002295 1 NC_005027.1 hypothetical protein 5002295 1790074 RB9337 Rhodopirellula baltica SH 1 hypothetical protein NP_868825.1 5002119 D 243090 CDS NP_868826.1 32475832 1795811 5002305..5002853 1 NC_005027.1 PMID: 11073907 PMID: 9651254 best DB hits: BLAST: pir:D69063; conserved hypothetical protein MTH1474 -; E=2e-16 gb:AAB89943.1; (AE001014) D-arabino 3-hexulose 6-phosphate; E=7e-13 gb:AAG32954.1; (AF032114) formaldehyde-activating enzyme; E=3e-10 COG: MTH1474_1; COG1795 Uncharacterized archaeal domain; E=1e-17; formaldehyde-activating enzyme 5002853 fae 1795811 fae Rhodopirellula baltica SH 1 formaldehyde-activating enzyme NP_868826.1 5002305 D 243090 CDS NP_868827.1 32475833 1791346 complement(5002928..5003644) 1 NC_005027.1 PMID: 9882677 best DB hits: BLAST: pir:S74670; hypothetical protein sll1663 - Synechocystis sp. (strain; E=0.069 pir:D69108; phycocyanin alpha phycocyanobilin lyase CpcE -; E=0.20 pir:F83358; hypothetical protein PA2293 [imported] - Pseudomonas; E=0.35 COG: sll1663; COG1413 Phycocyanin alpha-subunit phycocyanobilin lyase and; E=0.007; phycocyanin alpha phycocyanobilin lyase CpcE 5003644 cpcE 1791346 cpcE Rhodopirellula baltica SH 1 phycocyanin alpha phycocyanobilin lyase CpcE NP_868827.1 5002928 R 243090 CDS NP_868828.1 32475834 1793695 5003578..5003808 1 NC_005027.1 hypothetical protein 5003808 1793695 RB9342 Rhodopirellula baltica SH 1 hypothetical protein NP_868828.1 5003578 D 243090 CDS NP_868829.1 32475835 1791229 5003789..5003968 1 NC_005027.1 hypothetical protein 5003968 1791229 RB9343 Rhodopirellula baltica SH 1 hypothetical protein NP_868829.1 5003789 D 243090 CDS NP_868830.1 32475836 1790517 5003979..5008139 1 NC_005027.1 best DB hits: BLAST: pir:D83545; probable helicase PA0799 [imported] - Pseudomonas; E=2e-96 embl:CAA67095.1; (X98455) SNF [Bacillus cereus]; E=8e-90 embl:CAB60181.1; (AL132824) helicase [Streptomyces; E=1e-86 COG: PA0799; COG0553 Superfamily II DNA/RNA helicases, SNF2 family; E=2e-97 PFAM: PF02561; Flagellar protein FliS; E=0.63 PF02156; Glycosyl hydrolase 26; E=0.62 PF00176; SNF2 and others N-terminal dom; E=1.5e-71; SWF/SNF family helicase 5008139 1790517 RB9344 Rhodopirellula baltica SH 1 SWF/SNF family helicase NP_868830.1 5003979 D 243090 CDS NP_868831.1 32475837 1794926 complement(5008092..5008376) 1 NC_005027.1 hypothetical protein 5008376 1794926 RB9345 Rhodopirellula baltica SH 1 hypothetical protein NP_868831.1 5008092 R 243090 CDS NP_868832.1 32475838 1795960 5008335..5008550 1 NC_005027.1 hypothetical protein 5008550 1795960 RB9346 Rhodopirellula baltica SH 1 hypothetical protein NP_868832.1 5008335 D 243090 CDS NP_868833.1 32475839 1790009 complement(5008394..5008600) 1 NC_005027.1 hypothetical protein 5008600 1790009 RB9347 Rhodopirellula baltica SH 1 hypothetical protein NP_868833.1 5008394 R 243090 CDS NP_868834.1 32475840 1796187 complement(5008536..5008826) 1 NC_005027.1 hypothetical protein 5008826 1796187 RB9348 Rhodopirellula baltica SH 1 hypothetical protein NP_868834.1 5008536 R 243090 CDS NP_868835.1 32475841 1796645 5008812..5009219 1 NC_005027.1 hypothetical protein 5009219 1796645 RB9349 Rhodopirellula baltica SH 1 hypothetical protein NP_868835.1 5008812 D 243090 CDS NP_868836.1 32475842 1791493 complement(5009312..5011513) 1 NC_005027.1 hypothetical protein 5011513 1791493 RB9350 Rhodopirellula baltica SH 1 hypothetical protein NP_868836.1 5009312 R 243090 CDS NP_868837.1 32475843 1796081 5011447..5011785 1 NC_005027.1 hypothetical protein 5011785 1796081 RB9351 Rhodopirellula baltica SH 1 hypothetical protein NP_868837.1 5011447 D 243090 CDS NP_868838.1 32475844 1797186 complement(5011516..5011746) 1 NC_005027.1 PMID: 2585490 best DB hits: BLAST: embl:CAA35604.1; (X17591) HsdS polypeptide, part of CfrA family; E=0.17 pir:NDECAS; type I site-specific deoxyribonuclease (EC 3.1.21.3); E=0.17 swissprot:P19705; T1SE_ECOLI TYPE I RESTRICTION ENZYME ECOEI; E=0.17; polypeptide HsdS 5011746 1797186 RB9352 Rhodopirellula baltica SH 1 polypeptide HsdS NP_868838.1 5011516 R 243090 CDS NP_868839.1 32475845 1796653 complement(5011753..5011917) 1 NC_005027.1 PMID: 7607524 best DB hits: BLAST: swissprot:P50196; MTE8_ECOLI MODIFICATION METHYLASE ECO47II; E=0.004 swissprot:P55393; Y4CK_RHISN REPLICATION PROTEIN A; E=0.35; modification methylase- transcriptional regulator 5011917 1796653 RB9353 Rhodopirellula baltica SH 1 modification methylase- transcriptional regulator NP_868839.1 5011753 R 243090 CDS NP_868840.1 32475846 1792438 5011855..5012406 1 NC_005027.1 hypothetical protein 5012406 1792438 RB9354 Rhodopirellula baltica SH 1 hypothetical protein NP_868840.1 5011855 D 243090 CDS NP_868841.1 32475847 1797217 complement(5012382..5012771) 1 NC_005027.1 hypothetical protein 5012771 1797217 RB9356 Rhodopirellula baltica SH 1 hypothetical protein NP_868841.1 5012382 R 243090 CDS NP_868842.1 32475848 1792216 complement(5012956..5014053) 1 NC_005027.1 catalyzes the conversion of terminal3'-phosphate of RNA to the 2',3'-cyclicphosphodiester; RNA 3'-terminal-phosphate cyclase 5014053 rtcA 1792216 rtcA Rhodopirellula baltica SH 1 RNA 3'-terminal-phosphate cyclase NP_868842.1 5012956 R 243090 CDS NP_868843.1 32475849 1796390 complement(5014031..5015563) 1 NC_005027.1 PMID: 9738023 best DB hits: BLAST: pir:E72265; conserved hypothetical protein - Thermotoga maritima; E=1e-45 gb:AAB90372.1; (AE001044) conserved hypothetical protein; E=3e-43 pir:B69080; conserved hypothetical protein MTH1597 -; E=2e-40 COG: TM1357; COG1690 Uncharacterized ACR; E=1e-46 PFAM: PF01139; Uncharacterized protein family UPF00; E=3e-38 PF00367; phosphotransferase system, EIIB; E=0.44; hypothetical protein 5015563 rtcB 1796390 rtcB Rhodopirellula baltica SH 1 hypothetical protein NP_868843.1 5014031 R 243090 CDS NP_868844.1 32475850 1792806 5015748..5017364 1 NC_005027.1 PMID: 9738023 best DB hits: BLAST: pir:C83074; transcriptional regulator RtcR PA4581 [imported] -; E=1e-163 swissprot:P38035; RTCR_ECOLI transcriptional regulator; E=1e-162 gb:AAA58220.1; (U18997) ORF_o532 [Escherichia coli]; E=1e-161 COG: rtcR_2; COG1221 NtrC family transcriptional regulators, ATPase; E=1e-111 atoC; COG2204 AAA superfamily ATPases with N-terminal receiver; E=8e-38 aq_218_2; COG1221 NtrC family transcriptional regulators, ATPase; E=3e-37 PFAM: PF00004; ATPase associated with variou; E=0.29 PF00158; Sigma-54 interaction domain; E=4e-84; transcriptional regulator RtcR 5017364 rtcR 1792806 rtcR Rhodopirellula baltica SH 1 transcriptional regulator RtcR NP_868844.1 5015748 D 243090 CDS NP_868845.1 32475851 1795668 5017351..5017809 1 NC_005027.1 hypothetical protein 5017809 1795668 RB9365 Rhodopirellula baltica SH 1 hypothetical protein NP_868845.1 5017351 D 243090 CDS NP_868846.1 32475852 1796641 complement(5017918..5018946) 1 NC_005027.1 best DB hits: BLAST: swissprot:P39879; YK26_PSEAE HYPOTHETICAL PROTEIN PA2026 -----; E=7e-06 gb:AAG57528.1; AE005471_5 (AE005471) cytochrome oxidase; E=0.004 ddbj:BAA16281.1; (D90870) similar to [SwissProt Accession Number; E=0.015 COG: PA2026; COG0385 Predicted Na+-dependent transporter; E=7e-07; sodium-dependent transporter 5018946 1796641 RB9366 Rhodopirellula baltica SH 1 sodium-dependent transporter NP_868846.1 5017918 R 243090 CDS NP_868847.1 32475853 1791519 complement(5018952..5019971) 1 NC_005027.1 PMID: 7952181 best DB hits: BLAST: swissprot:P42419; IOLI_BACSU IOLI PROTEIN ----- pir: A69646; E=3e-12 ddbj:BAB06034.1; (AP001515) myo-inositol catabolism [Bacillus; E=1e-08 pir:D83615; hypothetical protein PA0242 [imported] - Pseudomonas; E=1e-05 COG: BS_iolI; COG1082 Predicted endonucleases; E=3e-13; xylose isomerase 5019971 lolI 1791519 lolI Rhodopirellula baltica SH 1 xylose isomerase NP_868847.1 5018952 R 243090 CDS NP_868848.1 32475854 1795344 complement(5020156..5020713) 1 NC_005027.1 hypothetical protein 5020713 1795344 RB9369 Rhodopirellula baltica SH 1 hypothetical protein NP_868848.1 5020156 R 243090 CDS NP_868849.1 32475855 1790178 complement(5020746..5021363) 1 NC_005027.1 PMID: 3062174 PMID: 8494895 PMID: 11551184 best DB hits: BLAST: swissprot:O66943; HIS5_AQUAE AMIDOTRANSFERASE HISH ----- pir:; E=9e-37 gb:AAA81252.1; (U30821) glutamine amidotransferase [Cyanophora; E=7e-34 swissprot:O27568; HIS5_METTH AMIDOTRANSFERASE HISH ----- pir:; E=3e-33 COG: aq_732; COG0118 Glutamine amidotransferase; E=9e-38 PFAM: PF00117; Glutamine amidotransferase class-I; E=8.1e-34; amidotransferase hisH 5021363 hisH 1790178 hisH Rhodopirellula baltica SH 1 amidotransferase hisH NP_868849.1 5020746 R 243090 CDS NP_868850.1 32475856 1796797 complement(5021612..5023600) 1 NC_005027.1 PMID: 3027506 PMID: 2164680 best DB hits: BLAST: gb:AAK05906.1; AE006411_1 (AE006411) ATP-dependent DNA helicase; E=9e-60 pir:E83226; ATP-dependent DNA helicase RecQ PA3344 [imported] -; E=4e-58 pir:G75413; DNA helicase RecQ - Deinococcus radiodurans (strain R1); E=1e-56 COG: PA3344; COG0514 Superfamily II DNA helicase; E=4e-59 YPL119c; COG0513 Superfamily II DNA and RNA helicases; E=5e-12 PFAM: PF00270; DEAD/DEAH box helicase; E=1e-32 PF00271; Helicase conserved C-terminal d; E=3.8e-26; ATP-dependent DNA helicase RecQ 5023600 recQ 1796797 recQ Rhodopirellula baltica SH 1 ATP-dependent DNA helicase RecQ NP_868850.1 5021612 R 243090 CDS NP_868851.1 32475857 1793651 complement(5023619..5029102) 1 NC_005027.1 PMID: 9441671 best DB hits: BLAST: pir:T30213; G-cadherin - sea urchin (Lytechinus variegatus) -----; E=9e-17 ddbj:BAA84069.1; (AB028498) Flamingo [Drosophila melanogaster]; E=5e-14 gb:AAF02618.1; AF172329_1 (AF172329) starry night protein; E=5e-14 PFAM: PF00028; Cadherin domain; E=7.1e-08; G-cadherin 5029102 1793651 RB9376 Rhodopirellula baltica SH 1 G-cadherin NP_868851.1 5023619 R 243090 CDS NP_868852.1 32475858 1791485 complement(5029125..5029487) 1 NC_005027.1 hypothetical protein 5029487 1791485 RB9380 Rhodopirellula baltica SH 1 hypothetical protein NP_868852.1 5029125 R 243090 CDS NP_868853.1 32475859 1797183 5029471..5030859 1 NC_005027.1 PMID: 8576051 best DB hits: BLAST: swissprot:P18584; DEGP_CHLTR PROBABLE SERINE PROTEASE DO-LIKE; E=2e-39 pir:B81728; serine proteinase, HtrADegQ/DegS family TC0210; E=4e-39 swissprot:Q9Z6T0; DEGP_CHLPN PROBABLE SERINE PROTEASE DO-LIKE; E=2e-36 COG: CT823; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=2e-40 CPn0979; COG0265 Trypsin-like serine proteases, typically; E=2e-37 degQ; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=4e-31 PFAM: PF00089; Trypsin; E=3.9e-17 PF00595; PDZ domain (Also known as DHR or GLG; E=1.5e-07; serine protease do-like [precursor] 5030859 htrA 1797183 htrA Rhodopirellula baltica SH 1 serine protease do-like [precursor] NP_868853.1 5029471 D 243090 CDS NP_868854.1 32475860 1795841 complement(5030902..5032212) 1 NC_005027.1 PMID: 11337471 PMID: 7921236 best DB hits: BLAST: gb:AAK05734.1; AE006394_4 (AE006394) ribose ABC transporter; E=1e-16 pir:G72416; sugar ABC transporter, permease - Thermotoga; E=3e-16 pir:B69690; ribose ABC transporter (permease) rbsC - Bacillus; E=3e-16 COG: TM0112; COG1172 Ribose/xylose/arabinose/galactoside ABC-type; E=3e-17 rbsC; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport; E=2e-14 VCA0129; COG1172 Ribose/xylose/arabinose/galactoside ABC-type; E=3e-14 PFAM: PF02653; Branched-chain amino acid transp; E=6e-09; ribose ABC transporter permease 5032212 rbsC 1795841 rbsC Rhodopirellula baltica SH 1 ribose ABC transporter permease NP_868854.1 5030902 R 243090 CDS NP_868855.1 32475861 1795786 complement(5032209..5033732) 1 NC_005027.1 PMID: 3011793 PMID: 3086314 best DB hits: BLAST: gb:AAG59288.1; AE005642_7 (AE005642) ATP-binding protein; E=8e-88 ddbj:BAB06041.1; (AP001515) sugar ABC transporter (ATP-binding; E=1e-86 ddbj:BAB07449.1; (AP001519) ribose ABC transporter (ATP-binding; E=2e-86 COG: BH2322; COG1129 ABC-type sugar (aldose) transport system, ATPase; E=1e-87 PFAM: PF00005; ABC transporter; E=2.1e-51; ribose ABC transporter ATP-binding protein 5033732 rbsA 1795786 rbsA Rhodopirellula baltica SH 1 ribose ABC transporter ATP-binding protein NP_868855.1 5032209 R 243090 CDS NP_868856.1 32475862 1789965 complement(5033729..5034937) 1 NC_005027.1 PMID: 2555670 PMID: 2137818 best DB hits: BLAST: swissprot:P14312; FIXW_RHILE FIXW PROTEIN ----- pir: JQ0313; E=7e-12 swissprot:P36893; HELX_RHOCA THIOL:DISULFIDE INTERCHANGE PROTEIN; E=1e-08 pir:C70314; thiol-disulfide interchange protein tlpA [imported] -; E=3e-05 COG: aq_152; COG0526 Thiol-disulfide isomerase and thioredoxins; E=3e-06 PFAM: PF00085; Thioredoxin; E=4.6e-05; FixW protein 5034937 fixW 1789965 fixW Rhodopirellula baltica SH 1 FixW protein NP_868856.1 5033729 R 243090 CDS NP_868857.1 32475863 1789959 5034987..5035370 1 NC_005027.1 hypothetical protein 5035370 1789959 RB9388 Rhodopirellula baltica SH 1 hypothetical protein NP_868857.1 5034987 D 243090 CDS NP_868858.1 32475864 1795637 complement(5034998..5035390) 1 NC_005027.1 hypothetical protein 5035390 1795637 RB9389 Rhodopirellula baltica SH 1 hypothetical protein NP_868858.1 5034998 R 243090 CDS NP_868859.1 32475865 1791180 5035453..5038491 1 NC_005027.1 PMID: 11823852 best DB hits: PFAM: PF00263; Bacterial type II and III secretion; E=0.68; signal peptide 5038491 1791180 RB9390 Rhodopirellula baltica SH 1 signal peptide NP_868859.1 5035453 D 243090 CDS NP_868860.1 32475866 1795633 complement(5037580..5038107) 1 NC_005027.1 signal peptide 5038107 1795633 RB9392 Rhodopirellula baltica SH 1 signal peptide NP_868860.1 5037580 R 243090 CDS NP_868861.1 32475867 1792353 5038491..5041415 1 NC_005027.1 best DB hits: BLAST: swissprot:O54101; MMLB_STRCO MEMBRANE PROTEIN SC10A5.10C; E=2e-29 swissprot:P96706; YDGH_BACSU MEMBRANE PROTEIN YDGH; E=3e-17 swissprot:Q53902; MMLA_STRCO MEMBRANE PROTEIN ACTII-3; E=1e-15 COG: BS_ydgH; COG2409 Predicted transporters; E=3e-18 AF0459; COG1033 Membrane proteins related to SecD/SecF; E=3e-07 BS_ydfJ; COG2409 Predicted transporters; E=3e-07; membrane protein- transporter 5041415 1792353 RB9395 Rhodopirellula baltica SH 1 membrane protein- transporter NP_868861.1 5038491 D 243090 CDS NP_868862.1 32475868 1790610 5041464..5041676 1 NC_005027.1 signal peptide 5041676 1790610 RB9399 Rhodopirellula baltica SH 1 signal peptide NP_868862.1 5041464 D 243090 CDS NP_868863.1 32475869 1792437 5041673..5043112 1 NC_005027.1 PMID: 20042346 best DB hits: BLAST: swissprot:Q57163; YLEA_HAEIN HYPOTHETICAL PROTEIN HI0019 -----; E=2e-87 gb:AAK03085.1; (AE006140) unknown [Pasteurella multocida]; E=3e-85 pir:C81034; conserved hypothetical protein NMB1866 [imported] -; E=3e-85 COG: HI0019; COG0621 Fe-S oxidoreductases family 1; E=2e-88 PFAM: PF00919; Uncharacterized protein family UPF00; E=1e-42; MiaB protein- tRNA-thiotransferase 5043112 miaB 1792437 miaB Rhodopirellula baltica SH 1 MiaB protein- tRNA-thiotransferase NP_868863.1 5041673 D 243090 CDS NP_868864.1 32475870 1794713 5043252..5044550 1 NC_005027.1 PMID: 9634230 best DB hits: BLAST: pir:A75264; hypothetical protein - Deinococcus radiodurans (strain; E=2e-36 gb:AAF78805.1; (U33883) mitochondrial processing peptidase-like; E=1e-35 swissprot:O86835; YA12_STRCO HYPOTHETICAL ZINC PROTEASE SC9A10.02; E=7e-26 COG: DR2516; COG0612 Predicted Zn-dependent peptidases; E=2e-37; zinc protease 5044550 1794713 RB9402 Rhodopirellula baltica SH 1 zinc protease NP_868864.1 5043252 D 243090 CDS NP_868865.1 32475871 1792671 5044547..5045809 1 NC_005027.1 best DB hits: BLAST: swissprot:O33324; YR82_MYCTU HYPOTHETICAL ZINC PROTEASE RV2782C; E=3e-47 swissprot:O32965; YR82_MYCLE HYPOTHETICAL ZINC PROTEASE MLCB22.26C; E=7e-44 pir:H75263; probable zinc proteinase - Deinococcus radiodurans; E=9e-43 COG: Rv2782c; COG0612 Predicted Zn-dependent peptidases; E=3e-48 PFAM: PF00675; Insulinase (Peptidase M1; E=4.8e-38; zinc protease 5045809 1792671 RB9404 Rhodopirellula baltica SH 1 zinc protease NP_868865.1 5044547 D 243090 CDS NP_868866.1 32475872 1790031 5045817..5047787 1 NC_005027.1 hypothetical protein 5047787 1790031 RB9405 Rhodopirellula baltica SH 1 hypothetical protein NP_868866.1 5045817 D 243090 CDS NP_868867.1 32475873 1796473 complement(5047798..5048169) 1 NC_005027.1 hypothetical protein 5048169 1796473 RB9409 Rhodopirellula baltica SH 1 hypothetical protein NP_868867.1 5047798 R 243090 CDS NP_868868.1 32475874 1796243 complement(5048166..5048582) 1 NC_005027.1 hypothetical protein 5048582 1796243 RB9410 Rhodopirellula baltica SH 1 hypothetical protein NP_868868.1 5048166 R 243090 CDS NP_868869.1 32475875 1796625 5048517..5049893 1 NC_005027.1 PMID: 20002534 PMID: 20225833 best DB hits: BLAST: gb:AAD38020.1; AF148127_1 (AF148127) transposase [Porphyromonas; E=2e-13 ddbj:BAA83477.1; (AB009361) transposase [Porphyromonas; E=3e-13 ddbj:BAA92234.1; (AB031551) transposase [Bacillus subtilis]; E=4e-10 COG: BH0691; COG3385 Predicted transposase; E=4e-10 PFAM: PF01609; Transposase (IS4 family); E=6.2e-08; transposase 5049893 1796625 RB9411 Rhodopirellula baltica SH 1 transposase NP_868869.1 5048517 D 243090 CDS NP_868870.1 32475876 1794852 5049820..5050239 1 NC_005027.1 signal peptide 5050239 1794852 RB9412 Rhodopirellula baltica SH 1 signal peptide NP_868870.1 5049820 D 243090 CDS NP_868871.1 32475877 1789974 complement(5050290..5050445) 1 NC_005027.1 hypothetical protein 5050445 1789974 RB9414 Rhodopirellula baltica SH 1 hypothetical protein NP_868871.1 5050290 R 243090 CDS NP_868872.1 32475878 1796139 5050419..5050529 1 NC_005027.1 hypothetical protein 5050529 1796139 RB9415 Rhodopirellula baltica SH 1 hypothetical protein NP_868872.1 5050419 D 243090 CDS NP_868873.1 32475879 1794947 5050621..5050932 1 NC_005027.1 hypothetical protein 5050932 1794947 RB9417 Rhodopirellula baltica SH 1 hypothetical protein NP_868873.1 5050621 D 243090 CDS NP_868874.1 32475880 1792623 complement(5051079..5053283) 1 NC_005027.1 best DB hits: BLAST: swissprot:Q9R6X3; PHYB_ANASP CYANOBACTERIAL PHYTOCHROME B -----; E=5e-32 gb:AAB89763.1; (AE001000) signal-transducing histidine kinase; E=7e-28 pir:C75276; sensory box sensor histidine kinase - Deinococcus; E=5e-25 COG: DR2419_2; COG0642 Sensory transduction histidine kinases; E=5e-26 PFAM: PF00989; PAS domain; E=1.5e-06 PF00785; PAC motif; E=0.00034 PF00512; His Kinase A (phosphoacceptor) doma; E=1.3e-11; signal-transducing histidine kinase 5053283 1792623 RB9418 Rhodopirellula baltica SH 1 signal-transducing histidine kinase NP_868874.1 5051079 R 243090 CDS NP_868875.1 32475881 1790234 complement(5053377..5055368) 1 NC_005027.1 PMID: 8094880 PMID: 9575204 PMID: 11546864 best DB hits: BLAST: pir:G69815; ABC transporter (ATP-binding protein) homolog ygaD -; E=7e-74 ddbj:BAB04660.1; (AP001510) ABC transporter (ATP-binding protein); E=3e-66 swissprot:P27299; MSBA_ECOLI PROBABLE TRANSPORT ATP-BINDING; E=6e-65 COG: BS_ygaD; COG1132 ABC-type multidrug/protein/lipid transport system,; E=7e-75 PFAM: PF00664; ABC transporter transmembrane re; E=1.7e-13 PF01583; Adenylylsulfate kinase; E=0.7 PF01202; Shikimate kinase; E=0.27; ABC transporter ATP-binding protein 5055368 msaB 1790234 msaB Rhodopirellula baltica SH 1 ABC transporter ATP-binding protein NP_868875.1 5053377 R 243090 CDS NP_868876.1 32475882 1796391 complement(5055426..5057453) 1 NC_005027.1 best DB hits: BLAST: embl:CAB75310.1; (AL139164) lipoprotein [Streptomyces; E=0.011; lipoprotein 5057453 1796391 RB9421 Rhodopirellula baltica SH 1 lipoprotein NP_868876.1 5055426 R 243090 CDS NP_868877.1 32475883 1793499 5056635..5057219 1 NC_005027.1 PMID: 1629228 best DB hits: BLAST: gb:AAG22814.1; (AF299248) talin [Drosophila melanogaster]; E=0.78; talin 5057219 1793499 RB9423 Rhodopirellula baltica SH 1 talin NP_868877.1 5056635 D 243090 CDS NP_868878.1 32475884 1795524 complement(5057450..5058616) 1 NC_005027.1 best DB hits: BLAST: pir:G70121; conserved hypothetical protein BB0175 - Lyme disease; E=4e-10 pir:G82493; conserved hypothetical protein VCA0174 [imported] -; E=6e-09 swissprot:P71761; YE80_MYCTU HYPOTHETICAL 34.3 KDA PROTEIN RV1480; E=1e-08 COG: BB0175; COG1721 Uncharacterized ACR; E=3e-11 PFAM: PF01882; Protein of unknown function DUF58; E=3.1e-15; hypothetical protein 5058616 1795524 RB9424 Rhodopirellula baltica SH 1 hypothetical protein NP_868878.1 5057450 R 243090 CDS NP_868879.1 32475885 1793908 5058620..5060074 1 NC_005027.1 best DB hits: BLAST: pir:T47637; hypothetical protein T5N23.140 - Arabidopsis thaliana; E=5e-20 swissprot:Q55874; Y103_SYNY3 HYPOTHETICAL 45.8 KD PROTEIN SLL0103; E=2e-18 swissprot:P76481; YFBK_ECOLI HYPOTHETICAL 63.6 KD PROTEIN IN; E=3e-18 COG: sll0103; COG2304 Protein containing von Willebrand factor (vWF) type; E=2e-19 yfbK; COG2304 Protein containing von Willebrand factor (vWF) type A; E=3e-19 PFAM: PF00092; von Willebrand factor type A domain; E=4.8e-06; hypothetical protein 5060074 1793908 RB9427 Rhodopirellula baltica SH 1 hypothetical protein NP_868879.1 5058620 D 243090 CDS NP_868880.1 32475886 1794527 5060081..5061778 1 NC_005027.1 best DB hits: BLAST: embl:CAB64973.1; (AJ012050) VicK protein [Enterococcus faecalis]; E=2e-15 pir:C72228; sensor histidine kinase HpkA - Thermotoga maritima; E=5e-15 ddbj:BAB05664.1; (AP001513) two-component sensor histidine kinase; E=5e-15 COG: TM1654_2; COG0642 Sensory transduction histidine kinases; E=5e-16 PFAM: PF00193; Extracellular link domain; E=0.19 PF00512; His Kinase A (phosphoacceptor) doma; E=2.9e-16 PF02518; Histidine kinase-, DNA gyrase B-, p; E=6.3e-27; two-component sensor histidine kinase VicK 5061778 1794527 RB9428 Rhodopirellula baltica SH 1 two-component sensor histidine kinase VicK NP_868880.1 5060081 D 243090 CDS NP_868881.1 32475887 1790910 5061763..5062482 1 NC_005027.1 PMID: 1454550 best DB hits: BLAST: embl:CAB90891.1; (AL355753) two-component system response; E=4e-40 swissprot:P37478; YYCF_BACSU HYPOTHETICAL 27.2 KD SENSORY; E=5e-40 gb:AAD10263.1; (AF036966) response regulator; E=9e-40 COG: BS_yycF; COG0745 Response regulators consisting of a CheY-like; E=5e-41 ompR; COG0745 Response regulators consisting of a CheY-like receiver; E=8e-37 TM1655; COG0745 Response regulators consisting of a CheY-like; E=7e-36 PFAM: PF00072; Response regulator receiver doma; E=3.9e-38 PF00486; Transcriptional regulatory prote; E=4.2e-23; two-component system response regulator 5062482 cheY 1790910 cheY Rhodopirellula baltica SH 1 two-component system response regulator NP_868881.1 5061763 D 243090 CDS NP_868882.1 32475888 1796422 5062464..5063273 1 NC_005027.1 signal peptide 5063273 1796422 RB9432 Rhodopirellula baltica SH 1 signal peptide NP_868882.1 5062464 D 243090 CDS NP_868883.1 32475889 1796363 complement(5063294..5063998) 1 NC_005027.1 best DB hits: BLAST: pir:S76975; hypothetical protein - Synechocystis sp. (strain PCC; E=1e-10 pir:S74748; hypothetical protein slr0981 - Synechocystis sp. (strain; E=2e-08 pir:B70303; hypothetical protein aq_037 - Aquifex aeolicus -----; E=4e-08; hypothetical protein 5063998 1796363 RB9433 Rhodopirellula baltica SH 1 hypothetical protein NP_868883.1 5063294 R 243090 CDS NP_868884.1 32475890 1794858 complement(5064002..5064139) 1 NC_005027.1 hypothetical protein 5064139 1794858 RB9434 Rhodopirellula baltica SH 1 hypothetical protein NP_868884.1 5064002 R 243090 CDS NP_868885.1 32475891 1797170 complement(5064117..5067209) 1 NC_005027.1 PMID: 7774814 best DB hits: BLAST: embl:CAB94054.1; (AL358672) serinethreonine-protein; E=9e-43 swissprot:P54736; PKN2_MYXXA SERINETHREONINE-PROTEIN KINASE PKN2; E=4e-39 swissprot:Q10697; PKNJ_MYCTU PROBABLE SERINETHREONINE-PROTEIN; E=2e-38 COG: Rv2088; COG0515 Serine/threonine protein kinases; E=2e-39 PFAM: PF00069; Protein kinase domain; E=1.6e-54; serine/threonine-protein kinase 5067209 pkn2 1797170 pkn2 Rhodopirellula baltica SH 1 serine/threonine-protein kinase NP_868885.1 5064117 R 243090 CDS NP_868886.1 32475892 1794045 5067290..5067919 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB05334.1; (AP001512) RNA polymerase sigma factor Y; E=5e-04 swissprot:Q44583; NCCH_ALCXX RNA POLYMERASE SIGMA FACTOR NCCH; E=6e-04 embl:CAB55345.1; (AJ010584) ECF sigma factor [Streptomyces; E=6e-04 COG: BH1615; COG1595 DNA-directed RNA polymerase specialized sigma; E=4e-05 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=2.8e-10 PF00140; Sigma-70 factor; E=0.11; RNA polymerase sigma factor Y 5067919 sigY 1794045 sigY Rhodopirellula baltica SH 1 RNA polymerase sigma factor Y NP_868886.1 5067290 D 243090 CDS NP_868887.1 32475893 1796420 complement(5067945..5069423) 1 NC_005027.1 best DB hits: BLAST: pir:T36423; probable large, multifunctional secreted protein -; E=4e-50 embl:CAB45032.1; (AL078635) large multi-functional; E=6e-45; large, multifunctional secreted protein 5069423 1796420 RB9438 Rhodopirellula baltica SH 1 large, multifunctional secreted protein NP_868887.1 5067945 R 243090 CDS NP_868888.1 32475894 1796275 complement(5069490..5073116) 1 NC_005027.1 best DB hits: BLAST: embl:CAB58265.1; (AL121849) multi-domain protein; E=6e-33 embl:CAB45032.1; (AL078635) large multi-functional; E=1e-32 pir:T36423; probable large, multifunctional secreted protein -; E=1e-06 PFAM: PF00034; Cytochrome c; E=0.023; large multi-functional protein 5073116 1796275 RB9439 Rhodopirellula baltica SH 1 large multi-functional protein NP_868888.1 5069490 R 243090 CDS NP_868889.1 32475895 1796207 complement(5073113..5074930) 1 NC_005027.1 hypothetical protein 5074930 1796207 RB9442 Rhodopirellula baltica SH 1 hypothetical protein NP_868889.1 5073113 R 243090 CDS NP_868890.1 32475896 1795576 5074872..5075621 1 NC_005027.1 best DB hits: BLAST: embl:CAB89030.1; (AL353870) integral membrane protein.; E=6e-17; hypothetical protein 5075621 1795576 RB9445 Rhodopirellula baltica SH 1 hypothetical protein NP_868890.1 5074872 D 243090 CDS NP_868891.1 32475897 1796087 5075664..5076218 1 NC_005027.1 best DB hits: BLAST: pir:S75593; hypothetical protein slr1340 - Synechocystis sp. (strain; E=3e-27 swissprot:P08457; STA_STRLA STREPTOTHRICIN ACETYLTRANSFERASE; E=2e-05 pir:JN0662; nourseothricin acetyltransferase (EC 2.3.1.-) -; E=3e-04 COG: slr1340; COG0454 Histone acetyltransferase HPA2 and related; E=3e-28 MTH1284; COG0456 Acetyltransferases; E=0.001 AF0521; COG0454 Histone acetyltransferase HPA2 and related; E=0.001 PFAM: PF00583; Acetyltransferase (GNAT) family; E=1.7e-20; hypothetical protein 5076218 1796087 RB9447 Rhodopirellula baltica SH 1 hypothetical protein NP_868891.1 5075664 D 243090 CDS NP_868892.1 32475898 1795698 5076267..5076614 1 NC_005027.1 best DB hits: BLAST: pir:C82978; conserved hypothetical protein PA5333 [imported] -; E=1e-12 pir:S74932; hypothetical protein slr0686 - Synechocystis sp. (strain; E=1e-08 COG: PA5333; COG3296 Uncharacterized BCR; E=1e-13; hypothetical protein 5076614 1795698 RB9448 Rhodopirellula baltica SH 1 hypothetical protein NP_868892.1 5076267 D 243090 CDS NP_868893.1 32475899 1791370 5076581..5076739 1 NC_005027.1 hypothetical protein 5076739 1791370 RB9450 Rhodopirellula baltica SH 1 hypothetical protein NP_868893.1 5076581 D 243090 CDS NP_868894.1 32475900 1795782 complement(5078621..5078860) 1 NC_005027.1 best DB hits: BLAST: gb:AAF79368.1; AC007887_27 (AC007887) F15O4.40 [Arabidopsis; E=0.77; hypothetical protein 5078860 1795782 RB9460 Rhodopirellula baltica SH 1 hypothetical protein NP_868894.1 5078621 R 243090 CDS NP_868895.1 32475901 1796482 complement(5078876..5079106) 1 NC_005027.1 hypothetical protein 5079106 1796482 RB9462 Rhodopirellula baltica SH 1 hypothetical protein NP_868895.1 5078876 R 243090 CDS NP_868896.1 32475902 1797073 5079098..5080984 1 NC_005027.1 best DB hits: BLAST: pir:H69181; hypothetical protein MTH616 - Methanobacterium; E=4e-31 pir:H69125; hypothetical protein MTH210 - Methanobacterium; E=2e-30 gb:AAF35993.1; AC005836_5 (AC005836) 26S Protease Regulatory; E=0.42 COG: MTH616; COG0606 Predicted ATPases; E=4e-32 PFAM: PF00004; ATPase associated with variou; E=0.039; hypothetical protein 5080984 1797073 RB9463 Rhodopirellula baltica SH 1 hypothetical protein NP_868896.1 5079098 D 243090 CDS NP_868897.1 32475903 1796438 5081396..5082625 1 NC_005027.1 best DB hits: PFAM: PF01040; UbiA prenyltransferase; E=0.14; hypothetical protein 5082625 1796438 RB9469 Rhodopirellula baltica SH 1 hypothetical protein NP_868897.1 5081396 D 243090 CDS NP_868898.1 32475904 1791366 5082460..5085018 1 NC_005027.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 5085018 ppk 1791366 ppk Rhodopirellula baltica SH 1 polyphosphate kinase NP_868898.1 5082460 D 243090 CDS NP_868899.1 32475905 1795446 5085031..5085393 1 NC_005027.1 hypothetical protein 5085393 1795446 RB9472 Rhodopirellula baltica SH 1 hypothetical protein NP_868899.1 5085031 D 243090 CDS NP_868900.1 32475906 1796227 5085390..5087720 1 NC_005027.1 signal peptide 5087720 1796227 RB9474 Rhodopirellula baltica SH 1 signal peptide NP_868900.1 5085390 D 243090 CDS NP_868901.1 32475907 1794092 5087717..5088817 1 NC_005027.1 best DB hits: BLAST: pir:S74476; ABC-type transport protein slr1113 - Synechocystis sp.; E=2e-46 pir:H71008; probable ATP-binding transport protein - Pyrococcus; E=2e-41 pir:E75122; hypothetical protein PAB1845 - Pyrococcus abyssi (strain; E=2e-40 COG: slr1113; COG1131 ABC-type multidrug transport system, ATPase; E=2e-47 ybhF; COG1131 ABC-type multidrug transport system, ATPase component; E=1e-33 TM1403; COG1131 ABC-type multidrug transport system, ATPase; E=2e-33 PFAM: PF00005; ABC transporter; E=5e-40; ABC-type transport protein 5088817 1794092 RB9477 Rhodopirellula baltica SH 1 ABC-type transport protein NP_868901.1 5087717 D 243090 CDS NP_868902.1 32475908 1792163 5088814..5089818 1 NC_005027.1 best DB hits: BLAST: pir:F81850; conserved hypothetical protein NMA1579 [imported] -; E=1e-66 pir:D81090; conserved hypothetical protein NMB1367 [imported] -; E=3e-66 pir:A82195; conserved hypothetical protein VC1488 [imported] -; E=1e-65 COG: NMB1367; COG1092 Predicted SAM-dependent methyltransferases; E=3e-67; methyltransferase 5089818 1792163 RB9478 Rhodopirellula baltica SH 1 methyltransferase NP_868902.1 5088814 D 243090 CDS NP_868903.1 32475909 1792598 complement(5089839..5090633) 1 NC_005027.1 hypothetical protein 5090633 1792598 RB9480 Rhodopirellula baltica SH 1 hypothetical protein NP_868903.1 5089839 R 243090 CDS NP_868904.1 32475910 1794945 complement(5090691..5090858) 1 NC_005027.1 hypothetical protein 5090858 1794945 RB9481 Rhodopirellula baltica SH 1 hypothetical protein NP_868904.1 5090691 R 243090 CDS NP_868905.1 32475911 1795680 5090809..5092401 1 NC_005027.1 best DB hits: BLAST: pir:G71008; hypothetical protein PH1365 - Pyrococcus horikoshii; E=0.58 pir:F75122; hypothetical protein PAB1844 - Pyrococcus abyssi (strain; E=0.72; hypothetical protein 5092401 1795680 RB9482 Rhodopirellula baltica SH 1 hypothetical protein NP_868905.1 5090809 D 243090 CDS NP_868906.1 32475912 1794994 complement(5092452..5094011) 1 NC_005027.1 best DB hits: BLAST: gb:AAF87925.1; AF163841_2 (AF163841) unknown [Myxococcus xanthus]; E=9e-51 swissprot:Q50722; YY03_MYCTU HYPOTHETICAL 57.9 KDA PROTEIN RV3403C; E=0.031 PFAM: PF00070; Pyridine nucleotide-disulphide oxid; E=4.7e-05; hypothetical protein 5094011 1794994 RB9484 Rhodopirellula baltica SH 1 hypothetical protein NP_868906.1 5092452 R 243090 CDS NP_868907.1 32475913 1797148 complement(5094035..5094190) 1 NC_005027.1 hypothetical protein 5094190 1797148 RB9485 Rhodopirellula baltica SH 1 hypothetical protein NP_868907.1 5094035 R 243090 CDS NP_868908.1 32475914 1797197 5094163..5094687 1 NC_005027.1 PMID: 8384293 best DB hits: BLAST: gb:AAB87745.1; (U89914) hypothetical 16.1 kDa transcriptional; E=8e-10 pir:G69867; transcriptional regulator MarR family homolog ykvE -; E=6e-06 pir:A82692; transcriptional regulator MarR family XF1354 [imported] -; E=1e-05 COG: BS_ykvE; COG1846 Transcriptional regulators; E=6e-07 PFAM: PF01047; MarR family; E=3.1e-20; hypothetical protein 5094687 1797197 RB9486 Rhodopirellula baltica SH 1 hypothetical protein NP_868908.1 5094163 D 243090 CDS NP_868909.1 32475915 1796460 5094757..5096388 1 NC_005027.1 PMID: 11549181 best DB hits: BLAST: gb:AAF82075.1; AF232751_3 (AF232751) unknown protein; E=1e-22 gb:AAB89642.1; (AE000991) conserved hypothetical protein; E=1e-10 gb:AAB89643.1; (AE000991) A. fulgidus predicted coding region; E=8e-05 COG: yeiH; COG2855 Uncharacterized membrane protein; E=2e-04 PFAM: PF00065; Neurotransmitter-gated ion-channel; E=0.36; hypothetical protein 5096388 1796460 RB9488 Rhodopirellula baltica SH 1 hypothetical protein NP_868909.1 5094757 D 243090 CDS NP_868910.1 32475916 1796433 5096385..5096651 1 NC_005027.1 signal peptide 5096651 1796433 RB9491 Rhodopirellula baltica SH 1 signal peptide NP_868910.1 5096385 D 243090 CDS NP_868911.1 32475917 1796042 5096754..5097221 1 NC_005027.1 best DB hits: BLAST: pir:G83613; probable acetyltransferase PA0249 [imported] -; E=7e-20 pir:S41381; hypothetical protein - Pseudomonas aeruginosa -----; E=5e-16 swissprot:P37664; YIAC_ECOLI HYPOTHETICAL 17.1 KDA PROTEIN IN; E=2e-13 COG: PA0249; COG0454 Histone acetyltransferase HPA2 and related; E=6e-21 Rv3420c; COG0456 Acetyltransferases; E=0.006 PFAM: PF00583; Acetyltransferase (GNAT) family; E=4.2e-21; acetyltransferase 5097221 1796042 RB9493 Rhodopirellula baltica SH 1 acetyltransferase NP_868911.1 5096754 D 243090 CDS NP_868912.1 32475918 1796052 complement(5097275..5098132) 1 NC_005027.1 best DB hits: BLAST: pir:B83343; hypothetical protein PA2418 [imported] - Pseudomonas; E=2e-88 embl:CAC08479.1; (AL392189) possible chromosome condensation; E=8e-42 pir:B83239; conserved hypothetical protein PA3240 [imported] -; E=2e-38 COG: PA2418; COG1741 Uncharacterized BCR; E=2e-89 PFAM: PF02678; Uncharacterized BCR, YhhW family COG; E=6.7e-09; hypothetical protein 5098132 1796052 RB9494 Rhodopirellula baltica SH 1 hypothetical protein NP_868912.1 5097275 R 243090 CDS NP_868913.1 32475919 1793520 complement(5098332..5098523) 1 NC_005027.1 hypothetical protein 5098523 1793520 RB9495 Rhodopirellula baltica SH 1 hypothetical protein NP_868913.1 5098332 R 243090 CDS NP_868914.1 32475920 1793356 5098535..5099059 1 NC_005027.1 hypothetical protein 5099059 1793356 RB9496 Rhodopirellula baltica SH 1 hypothetical protein NP_868914.1 5098535 D 243090 CDS NP_868915.1 32475921 1793462 5099139..5100695 1 NC_005027.1 PMID: 10336424 best DB hits: BLAST: gb:AAF04318.1; (AF065159) arylsulfatase [Bradyrhizobium; E=1e-59 gb:AAG58993.1; AE005611_3 (AE005611) arylsulfatase [Escherichia; E=5e-45 swissprot:P25549; ASLA_ECOLI ARYLSULFATASE (ARYL-SULFATE; E=5e-45 COG: aslA; COG3119 Arylsulfatase A and related enzymes; E=4e-46 yejM; COG3083 Predicted hydrolase of alkaline phosphatase; E=0.001 PFAM: PF00884; Sulfatase; E=5.8e-75; arylsulfatase 5100695 arsA 1793462 arsA Rhodopirellula baltica SH 1 arylsulfatase NP_868915.1 5099139 D 243090 CDS NP_868916.1 32475922 1792721 5100826..5101953 1 NC_005027.1 PMID: 1657871 best DB hits: BLAST: pir:H82493; MoxR-related protein VCA0175 [imported] - Vibrio; E=1e-87 pir:G83261; conserved hypothetical protein PA3070 [imported] -; E=2e-87 pir:H70121; methanol dehydrogenase regulator (moxR) homolog - Lyme; E=3e-69 COG: VCA0175; COG0714 MoxR-like ATPases; E=9e-89 PFAM: PF01078; Magnesium chelatase, subunit Chl; E=6.9e-08; MoxR-related protein 5101953 moxR 1792721 moxR Rhodopirellula baltica SH 1 MoxR-related protein NP_868916.1 5100826 D 243090 CDS NP_868917.1 32475923 1791747 5101960..5102925 1 NC_005027.1 best DB hits: BLAST: pir:H83261; hypothetical protein PA3071 [imported] - Pseudomonas; E=2e-35 pir:G82493; conserved hypothetical protein VCA0174 [imported] -; E=6e-30 pir:D83106; hypothetical protein PA4323 [imported] - Pseudomonas; E=1e-11 COG: PA3071; COG1721 Uncharacterized ACR; E=2e-36 PFAM: PF01882; Protein of unknown function DUF58; E=2.4e-18; hypothetical protein 5102925 1791747 RB9500 Rhodopirellula baltica SH 1 hypothetical protein NP_868917.1 5101960 D 243090 CDS NP_868918.1 32475924 1792603 5102922..5103431 1 NC_005027.1 hypothetical protein 5103431 1792603 RB9501 Rhodopirellula baltica SH 1 hypothetical protein NP_868918.1 5102922 D 243090 CDS NP_868919.1 32475925 1795085 5103356..5104462 1 NC_005027.1 best DB hits: BLAST: pir:E82493; conserved hypothetical protein VCA0172 [imported] -; E=7e-49 pir:B83262; hypothetical protein PA3073 [imported] - Pseudomonas; E=3e-44 gb:AAD30858.1; AF116251_1 (AF116251) BatA [Bacteroides fragilis]; E=6e-23 COG: VCA0172; COG3035 Uncharacterized BCR; E=7e-50; hypothetical protein 5104462 1795085 RB9502 Rhodopirellula baltica SH 1 hypothetical protein NP_868919.1 5103356 D 243090 CDS NP_868920.1 32475926 1793143 5104459..5105412 1 NC_005027.1 best DB hits: BLAST: pir:D82493; conserved hypothetical protein VCA0171 [imported] -; E=9e-11 pir:C83262; hypothetical protein PA3074 [imported] - Pseudomonas; E=4e-10 gb:AAD30859.1; AF116251_2 (AF116251) BatB [Bacteroides fragilis]; E=0.046 COG: VCA0171_1; COG3035 Uncharacterized BCR; E=2e-12; hypothetical protein 5105412 1793143 RB9504 Rhodopirellula baltica SH 1 hypothetical protein NP_868920.1 5104459 D 243090 CDS NP_868921.1 32475927 1790408 5105412..5106041 1 NC_005027.1 best DB hits: BLAST: pir:D82493; conserved hypothetical protein VCA0171 [imported] -; E=4e-12 pir:C83262; hypothetical protein PA3074 [imported] - Pseudomonas; E=9e-06 pir:S74853; hypothetical protein sll0837 - Synechocystis sp. (strain; E=0.059 COG: VCA0171_2; COG0457 TPR-repeat-containing proteins; E=2e-10 PFAM: PF00515; TPR Domain; E=1.3e-05; hypothetical protein 5106041 1790408 RB9505 Rhodopirellula baltica SH 1 hypothetical protein NP_868921.1 5105412 D 243090 CDS NP_868922.1 32475928 1792569 5106038..5107351 1 NC_005027.1 best DB hits: BLAST: pir:D83262; hypothetical protein PA3075 [imported] - Pseudomonas; E=1e-18; hypothetical protein 5107351 1792569 RB9506 Rhodopirellula baltica SH 1 hypothetical protein NP_868922.1 5106038 D 243090 CDS NP_868923.1 32475929 1789945 complement(5107377..5108834) 1 NC_005027.1 best DB hits: BLAST: pir:S77346; hypothetical protein slr1841 - Synechocystis sp. (strain; E=0.64; hypothetical protein 5108834 1789945 RB9508 Rhodopirellula baltica SH 1 hypothetical protein NP_868923.1 5107377 R 243090 CDS NP_868924.1 32475930 1790453 5108992..5109963 1 NC_005027.1 signal peptide 5109963 1790453 RB9512 Rhodopirellula baltica SH 1 signal peptide NP_868924.1 5108992 D 243090 CDS NP_868925.1 32475931 1792157 5109960..5111885 1 NC_005027.1 PMID: 1501644 best DB hits: BLAST: gb:AAF70456.1; AF221952_1 (AF221952) mu-protocadherin [Rattus; E=5e-08 gb:AAF45927.1; (AE003430) CG15570 gene product [Drosophila; E=3e-07 embl:CAC16087.1; (AJ289697) zona pellucida protein 1 [Gallus; E=5e-07 COG: VC1711; COG1032 Fe-S oxidoreductases family 2; E=6e-04; mu-protocadherin- cell-suface protein 5111885 1792157 RB9513 Rhodopirellula baltica SH 1 mu-protocadherin- cell-suface protein NP_868925.1 5109960 D 243090 CDS NP_868926.1 32475932 1792786 5111918..5112856 1 NC_005027.1 signal peptide 5112856 1792786 RB9518 Rhodopirellula baltica SH 1 signal peptide NP_868926.1 5111918 D 243090 CDS NP_868927.1 32475933 1796599 complement(5112897..5114495) 1 NC_005027.1 PMID: 12024217; hypothetical protein 5114495 1796599 RB9520 Rhodopirellula baltica SH 1 hypothetical protein NP_868927.1 5112897 R 243090 CDS NP_868928.1 32475934 1797182 5114655..5115068 1 NC_005027.1 best DB hits: BLAST: swissprot:P37684; YIAW_ECOLI HYPOTHETICAL 12.4 KD PROTEIN IN; E=0.006 swissprot:P32108; YIBI_ECOLI HYPOTHETICAL 13.9 KD PROTEIN IN; E=0.019 gb:AAG58742.1; AE005586_7 (AE005586) orf, hypothetical protein; E=0.019; hypothetical protein 5115068 1797182 RB9522 Rhodopirellula baltica SH 1 hypothetical protein NP_868928.1 5114655 D 243090 CDS NP_868929.1 32475935 1796412 5115178..5116371 1 NC_005027.1 best DB hits: BLAST: pir:H82507; conserved hypothetical protein VCA0047 [imported] -; E=1e-42 swissprot:P32107; YIBH_ECOLI HYPOTHETICAL 42.0 KD PROTEIN IN; E=2e-27 swissprot:P37683; YIAV_ECOLI HYPOTHETICAL 41.8 KD PROTEIN IN; E=2e-23 COG: VCA0047; COG1566 Multidrug resistance efflux pump; E=1e-43 ybhG; COG0845 Membrane-fusion protein; E=2e-08 PA1237; COG1566 Multidrug resistance efflux pump; E=5e-08 PFAM: PF00529; HlyD family secretion protein; E=3.2e-10; multidrug resistance efflux pump 5116371 1796412 RB9526 Rhodopirellula baltica SH 1 multidrug resistance efflux pump NP_868929.1 5115178 D 243090 CDS NP_868930.1 32475936 1792631 5116407..5117846 1 NC_005027.1 signal peptide 5117846 1792631 RB9527 Rhodopirellula baltica SH 1 signal peptide NP_868930.1 5116407 D 243090 CDS NP_868931.1 32475937 1796446 complement(5117274..5117864) 1 NC_005027.1 hypothetical protein 5117864 1796446 RB9528 Rhodopirellula baltica SH 1 hypothetical protein NP_868931.1 5117274 R 243090 CDS NP_868932.1 32475938 1796552 5117956..5118297 1 NC_005027.1 hypothetical protein 5118297 1796552 RB9529 Rhodopirellula baltica SH 1 hypothetical protein NP_868932.1 5117956 D 243090 CDS NP_868933.1 32475939 1794581 complement(5118294..5119910) 1 NC_005027.1 PMID: 10336424 best DB hits: BLAST: swissprot:P25549; ASLA_ECOLI ARYLSULFATASE (ARYL-SULFATE; E=4e-62 gb:AAG58993.1; AE005611_3 (AE005611) arylsulfatase [Escherichia; E=6e-62 gb:AAC32036.1; (M90498) arylsulfatase [Escherichia coli]; E=1e-54 COG: aslA; COG3119 Arylsulfatase A and related enzymes; E=4e-63 PFAM: PF00884; Sulfatase; E=3.6e-42; arylsulfatase 5119910 aslA 1794581 aslA Rhodopirellula baltica SH 1 arylsulfatase NP_868933.1 5118294 R 243090 CDS NP_868934.1 32475940 1795948 5119929..5120243 1 NC_005027.1 hypothetical protein 5120243 1795948 RB9532 Rhodopirellula baltica SH 1 hypothetical protein NP_868934.1 5119929 D 243090 CDS NP_868935.1 32475941 1795463 5120240..5121715 1 NC_005027.1 PMID: 9370333 PMID: 1663113 best DB hits: BLAST: gb:AAB60128.1; (U24202) cardiolipin synthase [Escherichia coli]; E=2e-68 swissprot:P31071; CLS_ECOLI CARDIOLIPIN SYNTHETASE (CARDIOLIPIN; E=4e-68 gb:AAB60144.1; (U24204) cardiolipin synthase [Escherichia coli]; E=7e-68 COG: cls; COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiol; E=3e-69 VC1670; COG1502; E=2e-64 PFAM: PF00614; Phospholipase D. Active site motif; E=0.016; cardiolipin synthase 5121715 cls 1795463 cls Rhodopirellula baltica SH 1 cardiolipin synthase NP_868935.1 5120240 D 243090 CDS NP_868936.1 32475942 1793501 5121750..5123204 1 NC_005027.1 PMID: http://us.expasy.org/cgi-bin/niceprot.pl?Q9WVR6 best DB hits: BLAST: pir:B69855; amino acid permease homolog ykbA - Bacillus subtilis; E=4e-13 swissprot:Q9WVR6; LAT2_RAT LARGE NEUTRAL AMINO ACIDS TRANSPORTER; E=2e-11 embl:CAB69072.1; (Y19022) LAT2 protein [Mus musculus]; E=3e-11 COG: BS_ykbA; COG0531 Amino acid transporters; E=4e-14; amino acid permease 5123204 ykbA 1793501 ykbA Rhodopirellula baltica SH 1 amino acid permease NP_868936.1 5121750 D 243090 CDS NP_868937.1 32475943 1796379 complement(5123259..5123963) 1 NC_005027.1 best DB hits: BLAST: pir:S76625; hypothetical protein - Synechocystis sp. (strain PCC; E=1e-13 pir:A83553; hypothetical protein PA0742 [imported] - Pseudomonas; E=3e-06 swissprot:P06549; LCTB_BACCA LCTB PROTEIN ----- pir: A25748; E=0.007 COG: PA0742; COG1226 Kef-type K+ transport systems, predicted NAD-binding; E=3e-07; hypothetical protein 5123963 1796379 RB9536 Rhodopirellula baltica SH 1 hypothetical protein NP_868937.1 5123259 R 243090 CDS NP_868938.1 32475944 1794027 complement(5124085..5124243) 1 NC_005027.1 hypothetical protein 5124243 1794027 RB9540 Rhodopirellula baltica SH 1 hypothetical protein NP_868938.1 5124085 R 243090 CDS NP_868939.1 32475945 1793546 5124210..5125622 1 NC_005027.1 PMID: 8196548 best DB hits: BLAST: pir:E83335; RND multidrug efflux membrane fusion protein MexE; E=9e-33 pir:T30829; hypothetical protein mexE - Pseudomonas aeruginosa; E=1e-31 embl:CAC14594.1; (AJ252200) membrane fusion protein; E=1e-21 COG: PA2493; COG0845 Membrane-fusion protein; E=9e-34 PFAM: PF00364; Biotin-requiring enzyme; E=0.31 PF00529; HlyD family secretion protein; E=5.5e-13; RND multidrug efflux membrane fusion protein MexE precursor 5125622 mexE 1793546 mexE Rhodopirellula baltica SH 1 RND multidrug efflux membrane fusion protein MexE precursor NP_868939.1 5124210 D 243090 CDS NP_868940.1 32475946 1792872 5125626..5128739 1 NC_005027.1 best DB hits: BLAST: pir:F83335; RND multidrug efflux transporter MexF PA2494 [imported] -; E=0.0 pir:T30830; hypothetical protein mexF - Pseudomonas aeruginosa -----; E=0.0 pir:T43024; ceoB protein - Burkholderia cepacia ----- gb:; E=0.0 COG: PA2494; COG0841 Cation/multidrug efflux pump; E=0.0 PFAM: PF00873; AcrB/AcrD/AcrF family; E=0; RND multidrug efflux transporter MexF 5128739 mexF 1792872 mexF Rhodopirellula baltica SH 1 RND multidrug efflux transporter MexF NP_868940.1 5125626 D 243090 CDS NP_868941.1 32475947 1790617 complement(5128796..5129950) 1 NC_005027.1 best DB hits: BLAST: embl:CAB83202.1; (AJ277117) membrane protein; E=6e-21 pir:S47693; hypothetical 38.5K protein (ftsy-nika intergenic region); E=2e-18 gb:AAG58583.1; AE005570_10 (AE005570) orf, hypothetical protein; E=3e-18 COG: yhhT; COG0628 Predicted permease; E=2e-19 PFAM: PF01594; Domain of unknown function DUF20; E=5e-05; membrane protein- a permease 5129950 1790617 RB9543 Rhodopirellula baltica SH 1 membrane protein- a permease NP_868941.1 5128796 R 243090 CDS NP_868942.1 32475948 1794719 5129925..5130128 1 NC_005027.1 hypothetical protein 5130128 1794719 RB9544 Rhodopirellula baltica SH 1 hypothetical protein NP_868942.1 5129925 D 243090 CDS NP_868943.1 32475949 1795608 complement(5130161..5130991) 1 NC_005027.1 best DB hits: BLAST: pir:F72424; hypothetical protein - Thermotoga maritima (strain MSB8); E=8e-27 gb:AAK03442.1; (AE006173) unknown [Pasteurella multocida]; E=8e-09 swissprot:P10478; XYNZ_CLOTM ENDO-1,4-BETA-XYLANASE Z PRECURSOR; E=1e-07 COG: TM0033; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; E=7e-28 PFAM: PF00561; alpha/beta hydrolase fold; E=0.033 PF01738; Dienelactone hydrolase; E=0.00013 PF02230; Phospholipase/Carboxylesterase; E=0.012; a hydrolase 5130991 1795608 RB9546 Rhodopirellula baltica SH 1 a hydrolase NP_868943.1 5130161 R 243090 CDS NP_868944.1 32475950 1796355 complement(5131031..5131201) 1 NC_005027.1 hypothetical protein 5131201 1796355 RB9547 Rhodopirellula baltica SH 1 hypothetical protein NP_868944.1 5131031 R 243090 CDS NP_868945.1 32475951 1795535 5131295..5134444 1 NC_005027.1 PMID: 8244397 PMID: 8325651 PMID: 20233298 best DB hits: BLAST: gb:AAA37880.1; (L07921) iduronate sulfatase [Mus musculus]; E=6e-34 gb:AAF30402.1; AF109924_1 (AF109924) sulfatase 1 precursor [Helix; E=9e-33 gb:AAF49287.1; (AE003522) CG7402 gene product [Drosophila; E=3e-31 COG: PA0031; COG3119 Arylsulfatase A and related enzymes; E=2e-28 PFAM: PF00884; Sulfatase; E=1.7e-25; iduronate-sulfatase (partial) and sulfatase 1 precursor 5134444 1795535 RB9549 Rhodopirellula baltica SH 1 iduronate-sulfatase (partial) and sulfatase 1 precursor NP_868945.1 5131295 D 243090 CDS NP_868946.1 32475952 1796918 complement(5134564..5135298) 1 NC_005027.1 PMID: 11823852; hypothetical protein 5135298 1796918 RB9550 Rhodopirellula baltica SH 1 hypothetical protein NP_868946.1 5134564 R 243090 CDS NP_868947.1 32475953 1795681 complement(5135358..5137139) 1 NC_005027.1 PMID: 9464374 best DB hits: BLAST: gb:AAD51849.1; AF178758_5 (AF178758) ArsA [Sinorhizobium sp. As4]; E=1e-162 swissprot:O50593; ARSA_ACIMU ARSENICAL PUMP-DRIVING ATPASE; E=1e-148 swissprot:P52145; ARA2_ECOLI ARSENICAL PUMP-DRIVING ATPASE; E=1e-147 COG: MJ1142; COG0003 Arsenite transporting ATPase; E=6e-22 PA1462; COG1192 ATPases involved in chromosome partitioning; E=4e-04 PFAM: PF01583; Adenylylsulfate kinase; E=0.42 PF00142; 4Fe-4S iron sulfur cluster bi; E=0.31 PF01695; IstB-like ATP binding protein; E=0.025; ArsA-catalytic subunit of arsenic oxyanion-translocating ATPase 5137139 arsA 1795681 arsA Rhodopirellula baltica SH 1 ArsA-catalytic subunit of arsenic oxyanion-translocating ATPase NP_868947.1 5135358 R 243090 CDS NP_868948.1 32475954 1790552 complement(5137202..5137570) 1 NC_005027.1 PMID: 9464374 best DB hits: BLAST: ddbj:BAA24821.1; (AB004659) ArsD [Acidiphilium multivorum]; E=7e-21 swissprot:P46003; ARD1_ECOLI ARSENICAL RESISTANCE OPERON; E=2e-20 gb:AAF89639.1; AF168737_2 (AF168737) ArsD [Klebsiella oxytoca]; E=3e-20; ArsD repressor protein 5137570 arsD 1790552 arsD Rhodopirellula baltica SH 1 ArsD repressor protein NP_868948.1 5137202 R 243090 CDS NP_868949.1 32475955 1792854 complement(5137602..5137772) 1 NC_005027.1 hypothetical protein 5137772 1792854 RB9556 Rhodopirellula baltica SH 1 hypothetical protein NP_868949.1 5137602 R 243090 CDS NP_868950.1 32475956 1790414 complement(5137783..5140833) 1 NC_005027.1 hypothetical protein 5140833 1790414 RB9557 Rhodopirellula baltica SH 1 hypothetical protein NP_868950.1 5137783 R 243090 CDS NP_868951.1 32475957 1794736 5140686..5141429 1 NC_005027.1 PMID: 9139909 best DB hits: BLAST: gb:AAC45219.1; (U87308) extracytoplasmic function alternative; E=7e-05 pir:H70507; probable sigE protein - Mycobacterium tuberculosis; E=1e-04 gb:AAC45221.1; (U87307) extracytoplasmic function alternative; E=4e-04 COG: Rv1221; COG1595 DNA-directed RNA polymerase specialized sigma; E=1e-05 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=3.2e-06; extracytoplasmic function alternative sigma factor 5141429 sigE 1794736 sigE Rhodopirellula baltica SH 1 extracytoplasmic function alternative sigma factor NP_868951.1 5140686 D 243090 CDS NP_868952.1 32475958 1794270 5141426..5142799 1 NC_005027.1 hypothetical protein 5142799 1794270 RB9563 Rhodopirellula baltica SH 1 hypothetical protein NP_868952.1 5141426 D 243090 CDS NP_868953.1 32475959 1792616 complement(5142812..5143795) 1 NC_005027.1 best DB hits: BLAST: embl:CAA96346.1; (Z71679) ORF YNR064c [Saccharomyces cerevisiae]; E=3e-59 embl:CAB56721.1; (AL121600) hydrolase [Streptomyces; E=1e-53 embl:CAB56691.1; (AL121596) hydrolase [Streptomyces; E=6e-30 COG: YNR064c; COG0596 Predicted hydrolases or acyltransferases; E=3e-60 Rv2296; COG0596 Predicted hydrolases or acyltransferases (alpha/beta; E=1e-15 BS_yugF; COG0596 Predicted hydrolases or acyltransferases; E=2e-15 PFAM: PF00561; alpha/beta hydrolase fold; E=7.1e-28; hydrolase 5143795 1792616 RB9565 Rhodopirellula baltica SH 1 hydrolase NP_868953.1 5142812 R 243090 CDS NP_868954.1 32475960 1792871 5143784..5143894 1 NC_005027.1 signal peptide 5143894 1792871 RB9566 Rhodopirellula baltica SH 1 signal peptide NP_868954.1 5143784 D 243090 CDS NP_868955.1 32475961 1796684 complement(5143904..5144374) 1 NC_005027.1 best DB hits: BLAST: pir:C82971; conserved hypothetical protein PA5395 [imported] -; E=1e-46 pir:S77029; hypothetical protein sll0781 - Synechocystis sp. (strain; E=1e-42 embl:CAC14336.1; (AL445945) conserved hypothetical protein; E=3e-36; hypothetical protein 5144374 1796684 RB9567 Rhodopirellula baltica SH 1 hypothetical protein NP_868955.1 5143904 R 243090 CDS NP_868956.1 32475962 1796159 complement(5144424..5145056) 1 NC_005027.1 PMID: 8007818 best DB hits: BLAST: gb:AAB31024.1; (S71704) Mip=24 kda macrophage infectivity; E=3e-32 pir:D83354; hypothetical protein PA2331 [imported] - Pseudomonas; E=8e-14 pir:B81134; macrophage infectivity potentiator-related protein; E=1e-13 COG: PA2331; COG2128 Uncharacterized ACR; E=7e-15 PA0565; COG0599 Uncharacterized ACR, homolog of; E=0.002 PFAM: PF02627; Carboxymuconolactone decarboxylase; E=1e-06; hypothetical protein 5145056 mip 1796159 mip Rhodopirellula baltica SH 1 hypothetical protein NP_868956.1 5144424 R 243090 CDS NP_868957.1 32475963 1793400 5145205..5146848 1 NC_005027.1 best DB hits: BLAST: swissprot:P71229; HYFR_ECOLI HYDROGENASE-4 TRANSCRIPTIONAL; E=1e-83 pir:B65025; hypothetical protein b2491 - Escherichia coli (strain; E=1e-83 ddbj:BAA16380.1; (D90878) FORMATE HYDROGENLYASE TRANSCRIPTIONAL; E=1e-83 COG: hyfR_2; COG1221 NtrC family transcriptional regulators, ATPase; E=2e-77 hydG; COG2204 AAA superfamily ATPases with N-terminal receiver; E=4e-66 aq_1792_2; COG1221 NtrC family transcriptional regulators, ATPase; E=8e-66 PFAM: PF01590; GAF domain; E=9.9e-11 PF00158; Sigma-54 interaction domain; E=2.1e-138; hydrogenase-4 transcriptional activator 5146848 hyfR 1793400 hyfR Rhodopirellula baltica SH 1 hydrogenase-4 transcriptional activator NP_868957.1 5145205 D 243090 CDS NP_868958.1 32475964 1791062 5146973..5149477 1 NC_005027.1 PMID: 7574579 best DB hits: BLAST: pir:F75417; L-sorbosone dehydrogenase - Deinococcus radiodurans; E=8e-06 swissprot:Q44091; SNDH_ACELI L-SORBOSONE DEHYDROGENASE (SNDH); E=0.20 COG: DR1257; COG2133 Glucose/sorbosone dehydrogenases; E=8e-07 PFAM: PF01436; NHL repeat; E=0.028; L-sorbosone dehydrogenase 5149477 1791062 RB9572 Rhodopirellula baltica SH 1 L-sorbosone dehydrogenase NP_868958.1 5146973 D 243090 CDS NP_868959.1 32475965 1793322 complement(5149549..5150355) 1 NC_005027.1 best DB hits: BLAST: swissprot:Q9X248; FABG_THEMA 3-OXOACYL-[ACYL-CARRIER PROTEIN]; E=7e-33 pir:E81695; 3-oxoacyl-(acyl carrier protein) reductase TC0508; E=3e-29 swissprot:P38004; FABG_CHLTR 3-OXOACYL-[ACYL-CARRIER PROTEIN]; E=2e-28 COG: TM1724; COG1028 Dehydrogenases with different specificities (related; E=7e-34 CPn0296; COG1028 Dehydrogenases with different specificities; E=3e-28 BH2491; COG1028 Dehydrogenases with different specificities (related; E=4e-27 PFAM: PF00106; short chain dehydrogenase; E=3.1e-58 PF00678; Short chain dehydrogenase/reduct; E=3.5e-06; 3-oxoacyl-ACP reductase 5150355 fabG 1793322 fabG Rhodopirellula baltica SH 1 3-oxoacyl-ACP reductase NP_868959.1 5149549 R 243090 CDS NP_868960.1 32475966 1789952 complement(5150346..5150501) 1 NC_005027.1 hypothetical protein 5150501 1789952 RB9577 Rhodopirellula baltica SH 1 hypothetical protein NP_868960.1 5150346 R 243090 CDS NP_868961.1 32475967 1796009 5150392..5150592 1 NC_005027.1 hypothetical protein 5150592 1796009 RB9578 Rhodopirellula baltica SH 1 hypothetical protein NP_868961.1 5150392 D 243090 CDS NP_868962.1 32475968 1796675 complement(5150535..5150921) 1 NC_005027.1 best DB hits: BLAST: swissprot:P37486; YYBR_BACSU HYPOTHETICAL 14.7 KDA PROTEIN IN; E=3e-25 ddbj:BAA19363.1; (AB001488) FUNCTION UNKNOWN, SIMILAR PRODUCT IN; E=3e-25 swissprot:P96673; YDEP_BACSU HYPOTHETICAL 15.2 KDA PROTEIN IN; E=3e-25 COG: BS_yybR; COG1733 Predicted transcriptional regulators; E=3e-26 PFAM: PF01638; Protein of unknown function DUF24; E=1.9e-44; cinnamoyl ester hydrolase- a transcriptional regulator 5150921 1796675 RB9581 Rhodopirellula baltica SH 1 cinnamoyl ester hydrolase- a transcriptional regulator NP_868962.1 5150535 R 243090 CDS NP_868963.1 32475969 1791223 5151075..5152061 1 NC_005027.1 best DB hits: BLAST: embl:CAA04767.1; (AJ001445) ripening-induced protein [Fragaria; E=6e-31 pir:T10824; auxin-induced protein (clone MII-3) - mung bean -----; E=3e-29 swissprot:Q9ZUC1; QORL_ARATH QUINONE OXIDOREDUCTASE-LIKE PROTEIN; E=9e-27 COG: PA1137; COG0604 NADPH:quinone reductase and related Zn-dependent; E=2e-24 PA5427; COG1064 Zn-dependent alcohol dehydrogenases; E=4e-10 VNG1821G; COG0604 NADPH:quinone reductase and related Zn-dependent; E=5e-10 PFAM: PF00107; Zinc-binding dehydrogenases; E=2.8e-68; ripening-induced protein- Zn-containing oxidoreductase 5152061 1791223 RB9584 Rhodopirellula baltica SH 1 ripening-induced protein- Zn-containing oxidoreductase NP_868963.1 5151075 D 243090 CDS NP_868964.1 32475970 1792231 5152143..5153129 1 NC_005027.1 best DB hits: BLAST: pir:E83496; hypothetical protein PA1186 [imported] - Pseudomonas; E=8e-50 embl:CAB76875.1; (AL159139) hypothetical protein SCL6.10; E=2e-12 swissprot:P71557; Y953_MYCTU HYPOTHETICAL 30.9 KDA PROTEIN RV0953C; E=7e-08 COG: PA1186; COG2141 Coenzyme F420-dependent N5,N10-methylene; E=8e-51 PFAM: PF00296; Bacterial luciferase; E=0.86; coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase 5153129 1792231 RB9585 Rhodopirellula baltica SH 1 coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase NP_868964.1 5152143 D 243090 CDS NP_868965.1 32475971 1792004 5153129..5153929 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB03618.1; (AP002522) contains ESTs; E=3e-20 pir:S42651; hypothetical protein - rape ----- embl: CAB58175.1; E=1e-19 pir:T02520; hypothetical protein F13M22.4 - Arabidopsis thaliana; E=2e-18 COG: Rv0068; COG1028 Dehydrogenases with different specificities (related; E=8e-17 VNG0479G; COG1028 Dehydrogenases with different specificities; E=1e-15 XF2716; COG1028 Dehydrogenases with different specificities (related; E=1e-15 PFAM: PF00106; short chain dehydrogenase; E=4.1e-22; oxidoreductase 5153929 1792004 RB9586 Rhodopirellula baltica SH 1 oxidoreductase NP_868965.1 5153129 D 243090 CDS NP_868966.1 32475972 1790547 5153993..5155975 1 NC_005027.1 PMID: 11932238; hypothetical protein 5155975 1790547 RB9587 Rhodopirellula baltica SH 1 hypothetical protein NP_868966.1 5153993 D 243090 CDS NP_868967.1 32475973 1792601 complement(5156015..5156821) 1 NC_005027.1 best DB hits: BLAST: embl:CAB62700.1; (AL133422) hypothetical protein SCM1.42c; E=7e-34 gb:AAF12648.1; AE001826_117 (AE001826) hypothetical protein; E=4e-33; hypothetical protein 5156821 1792601 RB9588 Rhodopirellula baltica SH 1 hypothetical protein NP_868967.1 5156015 R 243090 CDS NP_868968.1 32475974 1794728 5156987..5157931 1 NC_005027.1 best DB hits: BLAST: pir:T36867; hypothetical protein SCI51.04 - Streptomyces coelicolor; E=3e-50 pir:T36868; hypothetical protein SCI51.05c - Streptomyces coelicolor; E=7e-07 pir:D83072; conserved hypothetical protein PA4584 [imported] -; E=2e-05; hypothetical protein 5157931 1794728 RB9591 Rhodopirellula baltica SH 1 hypothetical protein NP_868968.1 5156987 D 243090 CDS NP_868969.1 32475975 1792075 5157928..5158737 1 NC_005027.1 best DB hits: BLAST: pir:T36868; hypothetical protein SCI51.05c - Streptomyces coelicolor; E=6e-54 swissprot:Q60312; Y002_METJA HYPOTHETICAL PROTEIN MJ0002 -----; E=1e-13 pir:T36867; hypothetical protein SCI51.04 - Streptomyces coelicolor; E=9e-07; hypothetical protein 5158737 1792075 RB9592 Rhodopirellula baltica SH 1 hypothetical protein NP_868969.1 5157928 D 243090 CDS NP_868970.1 32475976 1795844 5158697..5161153 1 NC_005027.1 PMID: 7522196 best DB hits: BLAST: swissprot:P35824; SLAP_BACCI S-LAYER RELATED PROTEIN PRECURSOR; E=4e-04 PFAM: PF02368; Bacterial Ig-like domain (group 2; E=0.013; S-layer related protein [precursor] 5161153 butB 1795844 butB Rhodopirellula baltica SH 1 S-layer related protein [precursor] NP_868970.1 5158697 D 243090 CDS NP_868971.1 32475977 1791703 5161160..5162500 1 NC_005027.1 hypothetical protein 5162500 1791703 RB9598 Rhodopirellula baltica SH 1 hypothetical protein NP_868971.1 5161160 D 243090 CDS NP_868972.1 32475978 1794225 complement(5161286..5162521) 1 NC_005027.1 hypothetical protein 5162521 1794225 RB9599 Rhodopirellula baltica SH 1 hypothetical protein NP_868972.1 5161286 R 243090 CDS NP_868973.1 32475979 1796075 5162500..5164209 1 NC_005027.1 best DB hits: BLAST: pir:A75582; serine proteinase, subtilase - Deinococcus; E=0.064 COG: DRA0283; COG1404 Subtilisin-like serine proteases; E=0.006; serine proteinase 5164209 1796075 RB9600 Rhodopirellula baltica SH 1 serine proteinase NP_868973.1 5162500 D 243090 CDS NP_868974.1 32475980 1791035 5164206..5167013 1 NC_005027.1 PMID: 7557402 best DB hits: BLAST: swissprot:Q00808; HET1_PODAN VEGETATIBLE INCOMPATIBILITY PROTEIN; E=3e-21 pir:T41075; hypothetical WD-repeat protein - fission yeast; E=9e-17 embl:CAA04998.1; (AJ001774) vanadium chloroperoxidase [Anabaena; E=2e-16 COG: YCR084c; COG2319 WD40 repeat protein; E=9e-14 PFAM: PF00400; WD domain, G-beta repeat; E=0.058; vegetatible incompatibility protein HET-E1 5167013 1791035 RB9604 Rhodopirellula baltica SH 1 vegetatible incompatibility protein HET-E1 NP_868974.1 5164206 D 243090 CDS NP_868975.1 32475981 1792263 5167135..5168976 1 NC_005027.1 PMID: 8335689 best DB hits: BLAST: embl:CAA84826.1; (Z35768) ORF YBL007c [Saccharomyces cerevisiae]; E=0.67; cytoskeleton assembly control protein SLA1- secreted or membrane associated protein 5168976 1792263 RB9606 Rhodopirellula baltica SH 1 cytoskeleton assembly control protein SLA1- secreted or membrane associated protein NP_868975.1 5167135 D 243090 CDS NP_868976.1 32475982 1796146 5169123..5170628 1 NC_005027.1 best DB hits: BLAST: pir:F70974; probable acrA1 protein - Mycobacterium tuberculosis; E=4e-15 gb:AAG31130.1; AF299336_7 (AF299336) MxcG [Stigmatella aurantiaca]; E=6e-12 pir:T37054; hypothetical protein SCJ21.05 - Streptomyces coelicolor; E=7e-10 COG: Rv3391_1; COG0451 Nucleoside-diphosphate-sugar epimerases; E=4e-16 PA4078_2; COG3320 Epimerase domains of multifunctional non-ribosomal; E=2e-04 PFAM: PF01073; 3-beta hydroxysteroid dehydro; E=0.7; AcrA1 protein 5170628 acrA1 1796146 acrA1 Rhodopirellula baltica SH 1 AcrA1 protein NP_868976.1 5169123 D 243090 CDS NP_868977.1 32475983 1796635 complement(5170773..5172827) 1 NC_005027.1 best DB hits: BLAST: pir:C81187; ABC transporter ATP-binding protein NMB0549 [imported]; E=3e-97 pir:C81916; probable ABC transporter ATP-binding protein NMA0729; E=8e-96 gb:AAG55261.1; AE005269_5 (AE005269) ATP-binding; E=7e-94 COG: BS_yknY; COG1136 ABC-type (unclassified) transport system, ATPase; E=1e-56 NMB0549_2; COG0577 Predicted permease; E=5e-46 PFAM: PF00735; Cell division protein; E=0.7 PF00005; ABC transporter; E=3e-64 PF02687; Predicted permease; E=0.2; ABC transporter ATP-binding protein 5172827 1796635 RB9611 Rhodopirellula baltica SH 1 ABC transporter ATP-binding protein NP_868977.1 5170773 R 243090 CDS NP_868978.1 32475984 1795843 complement(5172824..5174467) 1 NC_005027.1 PMID: 8231810 best DB hits: BLAST: swissprot:P33951; SYRD_PSESY ATP-BINDING PROTEIN SYRD -----; E=8e-65 pir:G83345; pyoverdine biosynthesis protein PvdE PA2397 [imported] -; E=8e-65 pir:S54001; pyoverdine synthetase E - Pseudomonas aeruginosa -----; E=9e-64 COG: PA2397; COG1132 ABC-type multidrug/protein/lipid transport system,; E=8e-66 APE1253; COG1136 ABC-type (unclassified) transport system, ATPase; E=2e-09 XF1081; COG1132 ABC-type multidrug/protein/lipid transport system,; E=2e-07 PFAM: PF00664; ABC transporter transmembrane; E=0.25 PF00470; RecF protein; E=0.13 PF02223; Thymidylate kinase; E=0.0054; ATP-binding protein syrD-ATP binding protein of ABC-type transporter 5174467 syrD 1795843 syrD Rhodopirellula baltica SH 1 ATP-binding protein syrD-ATP binding protein of ABC-type transporter NP_868978.1 5172824 R 243090 CDS NP_868979.1 32475985 1796389 complement(5174489..5174650) 1 NC_005027.1 hypothetical protein 5174650 1796389 RB9613 Rhodopirellula baltica SH 1 hypothetical protein NP_868979.1 5174489 R 243090 CDS NP_868980.1 32475986 1790357 complement(5174663..5175448) 1 NC_005027.1 best DB hits: BLAST: swissprot:Q10323; YD6B_SCHPO HYPOTHETICAL 42.2 KD PROTEIN; E=1e-28 pir:T38533; similar to S. cerevisiae sur1 protein - fission yeast; E=4e-27 gb:AAB68308.1; (U39205) Sur1p [Saccharomyces cerevisiae]; E=8e-26; surface protein Sur1 5175448 sur1 1790357 sur1 Rhodopirellula baltica SH 1 surface protein Sur1 NP_868980.1 5174663 R 243090 CDS NP_868981.1 32475987 1795455 complement(5175471..5176667) 1 NC_005027.1 PMID: 8162191 PMID: 7536735 best DB hits: BLAST: pir:I76776; Mannosyltransferase (EC 5.-.-.-) B - Escherichia coli; E=2e-26 gb:AAF04384.1; AF189151_7 (AF189151) WbdB; mannosyl transferase B; E=2e-26 gb:AAC38771.1; (AF010182) glycosyltransferase WbpY [Pseudomonas; E=3e-21 COG: PA5448; COG0438 Predicted glycosyltransferases; E=3e-22 PFAM: PF00534; Glycosyl transferases group 1; E=2.1e-24; mannosyltransferase 5176667 mtfB 1795455 mtfB Rhodopirellula baltica SH 1 mannosyltransferase NP_868981.1 5175471 R 243090 CDS NP_868982.1 32475988 1791524 complement(5176761..5177939) 1 NC_005027.1 hypothetical protein 5177939 1791524 RB9619 Rhodopirellula baltica SH 1 hypothetical protein NP_868982.1 5176761 R 243090 CDS NP_868983.1 32475989 1792150 complement(5177920..5179596) 1 NC_005027.1 hypothetical protein 5179596 1792150 RB9620 Rhodopirellula baltica SH 1 hypothetical protein NP_868983.1 5177920 R 243090 CDS NP_868984.1 32475990 1791956 complement(5179518..5180189) 1 NC_005027.1 best DB hits: BLAST: embl:CAA69119.1; (Y07786) sugar transferase [Vibrio cholerae]; E=3e-13 ddbj:BAA33603.1; (AB012956) probable glycosyl transferase [Vibrio; E=3e-13 pir:T44330; glycosyl transferase homolog [imported] - Vibrio; E=3e-12 COG: BH3661; COG0463 Glycosyltransferases involved in cell wall; E=7e-13 RP339; COG0463 Glycosyltransferases involved in cell wall biogenesis; E=5e-10 HI0868; COG0463 Glycosyltransferases involved in cell wall; E=4e-09 PFAM: PF00535; Glycosyl transferase; E=1.9e-44; sugar transferase- a glycosyl transferase 5180189 1791956 RB9623 Rhodopirellula baltica SH 1 sugar transferase- a glycosyl transferase NP_868984.1 5179518 R 243090 CDS NP_868985.1 32475991 1796039 complement(5180186..5181259) 1 NC_005027.1 hypothetical protein 5181259 1796039 RB9624 Rhodopirellula baltica SH 1 hypothetical protein NP_868985.1 5180186 R 243090 CDS NP_868986.1 32475992 1794730 complement(5181277..5181714) 1 NC_005027.1 hypothetical protein 5181714 1794730 RB9625 Rhodopirellula baltica SH 1 hypothetical protein NP_868986.1 5181277 R 243090 CDS NP_868987.1 32475993 1789999 5181753..5181959 1 NC_005027.1 hypothetical protein 5181959 1789999 RB9626 Rhodopirellula baltica SH 1 hypothetical protein NP_868987.1 5181753 D 243090 CDS NP_868988.1 32475994 1793933 5181911..5183374 1 NC_005027.1 best DB hits: BLAST: pir:S74764; hypothetical protein slr1063 - Synechocystis sp. (strain; E=2e-10 gb:AAB91182.1; (AE001103) mannosyltransferase A (mtfA); E=3e-10 pir:S77338; LPS glycosyltransferase icsA - Synechocystis sp. (strain; E=0.004 COG: AF0045; COG0438 Predicted glycosyltransferases; E=3e-11 PFAM: PF00534; Glycosyl transferases group 1; E=9.2e-10; mannosyltransferase 5183374 mtfA 1793933 mtfA Rhodopirellula baltica SH 1 mannosyltransferase NP_868988.1 5181911 D 243090 CDS NP_868989.1 32475995 1793053 complement(5183393..5184385) 1 NC_005027.1 PMID: 9106218 best DB hits: BLAST: gb:AAB61353.1; (U36390) delta-9 desaturase [Synechococcus sp. PCC; E=2e-39 pir:S75765; stearoyl-CoA desaturase (EC 1.14.99.5) 1 - Synechocystis; E=1e-36 pir:S57643; stearoyl-CoA desaturase (EC 1.14.99.5) - Synechococcus; E=2e-36 COG: sll0541; COG1398 Fatty-acid desaturase; E=1e-37 PFAM: PF01069; Fatty acid desaturase; E=7.5e-32; delta-9 desaturase 5184385 desC 1793053 desC Rhodopirellula baltica SH 1 delta-9 desaturase NP_868989.1 5183393 R 243090 CDS NP_868990.1 32475996 1791142 complement(5184595..5185926) 1 NC_005027.1 best DB hits: BLAST: gb:AAF15891.2; AF204805_1 (AF204805) NosA [Nostoc sp. GSV224]; E=0.19 PFAM: PF00668; Condensation domain; E=0.00055; hypothetical protein 5185926 1791142 RB9631 Rhodopirellula baltica SH 1 hypothetical protein NP_868990.1 5184595 R 243090 CDS NP_868991.1 32475997 1792686 complement(5185973..5187031) 1 NC_005027.1 hypothetical protein 5187031 1792686 RB9635 Rhodopirellula baltica SH 1 hypothetical protein NP_868991.1 5185973 R 243090 CDS NP_868992.1 32475998 1796329 5187058..5188608 1 NC_005027.1 best DB hits: BLAST: pir:B75096; glycosyl transferase PAB0772 - Pyrococcus abyssi (strain; E=8e-23 gb:AAC44786.1; (U70729) MigA [Pseudomonas aeruginosa]; E=2e-22 pir:B83557; probable glycosyl transferase PA0705 [imported] -; E=2e-22 COG: PAB0772; COG0463 Glycosyltransferases involved in cell wall; E=7e-24 RP339; COG0463 Glycosyltransferases involved in cell wall biogenesis; E=2e-17 PA5000; COG0463 Glycosyltransferases involved in cell wall; E=3e-17 PFAM: PF00535; Glycosyl transferase; E=3.7e-41; glycosyl transferase 5188608 1796329 RB9637 Rhodopirellula baltica SH 1 glycosyl transferase NP_868992.1 5187058 D 243090 CDS NP_868993.1 32475999 1792198 complement(5188617..5189891) 1 NC_005027.1 best DB hits: BLAST: embl:CAC11705.1; (AL445064) hypothetical protein [Thermoplasma; E=5e-14 pir:S75560; ceramide glucosyltransferase - Synechocystis sp. (strain; E=2e-11 ddbj:BAA09451.1; (D50840) ceramide glucosyltransferase [Homo; E=0.004 COG: Ta0565; COG1215 Glycosyltransferases, probably involved in cell wall; E=5e-15 slr0813; COG1215 Glycosyltransferases, probably involved in cell; E=2e-12 PFAM: PF00535; Glycosyl transferase; E=0.014; ceramide glucosyltransferase 5189891 1792198 RB9640 Rhodopirellula baltica SH 1 ceramide glucosyltransferase NP_868993.1 5188617 R 243090 CDS NP_868994.1 32476000 1796572 5189877..5190098 1 NC_005027.1 hypothetical protein 5190098 1796572 RB9641 Rhodopirellula baltica SH 1 hypothetical protein NP_868994.1 5189877 D 243090 CDS NP_868995.1 32476001 1794540 5190092..5190214 1 NC_005027.1 hypothetical protein 5190214 1794540 RB9642 Rhodopirellula baltica SH 1 hypothetical protein NP_868995.1 5190092 D 243090 CDS NP_868996.1 32476002 1796059 5190264..5191526 1 NC_005027.1 best DB hits: BLAST: gb:AAK03081.1; (AE006139) unknown [Pasteurella multocida]; E=8e-11 gb:AAG55260.1; AE005269_4 (AE005269) membrane protein; E=5e-10 pir:F64826; probable membrane protein b0878 - Escherichia coli; E=1e-09 COG: ybjY; COG0845 Membrane-fusion protein; E=1e-10 VC1410; COG1566 Multidrug resistance efflux pump; E=6e-06 NMB0548; COG0845 Membrane-fusion protein; E=1e-05 PFAM: PF00529; HlyD family secretion protein; E=7.9e-05; hypothetical protein 5191526 1796059 RB9643 Rhodopirellula baltica SH 1 hypothetical protein NP_868996.1 5190264 D 243090 CDS NP_868997.1 32476003 1796171 complement(5191659..5193572) 1 NC_005027.1 PMID: 11222613 best DB hits: BLAST: gb:AAF87592.1; AF286062_5 (AF286062) AprF [Pseudomonas; E=0.29 gb:AAF01330.1; (AF188365) outer membrane protein [Pseudomonas; E=0.64 PFAM: PF02321; Outer membrane efflux protein; E=2.3e-05; AprF- outer membrane efflux protein or secreted alkaline phosphatase 5193572 aprF 1796171 aprF Rhodopirellula baltica SH 1 AprF- outer membrane efflux protein or secreted alkaline phosphatase NP_868997.1 5191659 R 243090 CDS NP_868998.1 32476004 1796358 complement(5193858..5195090) 1 NC_005027.1 best DB hits: BLAST: embl:CAC11705.1; (AL445064) hypothetical protein [Thermoplasma; E=9e-09 pir:S75560; ceramide glucosyltransferase - Synechocystis sp. (strain; E=3e-08 ddbj:BAA09451.1; (D50840) ceramide glucosyltransferase [Homo; E=7e-05 COG: Ta0565; COG1215 Glycosyltransferases, probably involved in cell wall; E=8e-10 slr0813; COG1215 Glycosyltransferases, probably involved in cell; E=3e-09 sll1004; COG0463 Glycosyltransferases involved in cell wall; E=4e-05 PFAM: PF00535; Glycosyl transferase; E=2e-07; ceramide glucosyltransferase 5195090 1796358 RB9648 Rhodopirellula baltica SH 1 ceramide glucosyltransferase NP_868998.1 5193858 R 243090 CDS NP_868999.1 32476005 1794358 complement(5195258..5196670) 1 NC_005027.1 PMID: 8020961 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=5e-38 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=4e-37 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=4e-37 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=6e-29 TM1703; COG1368 Phosphoglycerol transferase and related proteins,; E=2e-04 VNG1337C; COG3119 Arylsulfatase A and related enzymes; E=8e-04 PFAM: PF00884; Sulfatase; E=5.7e-53; N-acetylgalactosamine 6-sulfatase (GALNS) 5196670 1794358 RB9650 Rhodopirellula baltica SH 1 N-acetylgalactosamine 6-sulfatase (GALNS) NP_868999.1 5195258 R 243090 CDS NP_869000.1 32476006 1791225 complement(5196643..5198277) 1 NC_005027.1 PMID: 97078679 PMID: 8662838 PMID: 10464298 PMID: 8918804 best DB hits: BLAST: embl:CAA67214.1; (X98625) sialic acid-specific 9-O-acetylesterase; E=3e-37 gb:AAB07813.1; (U40408) sialic-acid O-acetylesterase [Mus; E=6e-37 pir:T46250; hypothetical protein DKFZp761A051.1 - human (fragment); E=1e-34; sialic acid-specific 9-O-acetylesterase 5198277 1791225 RB9651 Rhodopirellula baltica SH 1 sialic acid-specific 9-O-acetylesterase NP_869000.1 5196643 R 243090 CDS NP_869001.1 32476007 1794949 5198245..5198721 1 NC_005027.1 hypothetical protein 5198721 1794949 RB9653 Rhodopirellula baltica SH 1 hypothetical protein NP_869001.1 5198245 D 243090 CDS NP_869002.1 32476008 1797146 5198833..5200932 1 NC_005027.1 catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase 5200932 pta 1797146 pta Rhodopirellula baltica SH 1 phosphate acetyltransferase NP_869002.1 5198833 D 243090 CDS NP_869003.1 32476009 1796441 5200863..5202038 1 NC_005027.1 PMID: 10074080 best DB hits: BLAST: swissprot:O52594; ACKA_CLOTM ACETATE KINASE (ACETOKINASE) -----; E=7e-71 swissprot:Q9WYB1; ACKA_THEMA ACETATE KINASE (ACETOKINASE) -----; E=2e-68 swissprot:P38502; ACKA_METTE ACETATE KINASE (ACETOKINASE) -----; E=5e-66 COG: TM0274; COG0282 Acetate kinase; E=2e-69 PFAM: PF00871; Acetokinase; E=3.3e-06; acetate kinase 5202038 ackA 1796441 ackA Rhodopirellula baltica SH 1 acetate kinase NP_869003.1 5200863 D 243090 CDS NP_869004.1 32476010 1793717 5202179..5203258 1 NC_005027.1 best DB hits: BLAST: embl:CAC18708.1; (AL451182) aldoketoreductase; E=9e-18 embl:CAA74709.1; (Y14332) dTDP-4-keto-L-6-deoxy-hexose; E=6e-17 ddbj:BAB04730.1; (AP001510) oxidoreductase [Bacillus halodurans]; E=2e-15 COG: BH1011; COG0667 Predicted oxidoreductases (related to aryl-alcohol; E=2e-16 Ta0027; COG0656 Aldo/keto reductases, related to diketogulonate; E=3e-12 BS_iolS; COG0667 Predicted oxidoreductases (related to aryl-alcohol; E=4e-12 PFAM: PF00248; Aldo/keto reductase; E=1.6e-13; dTDP-4-keto-L-6-deoxy-hexose 2,3-reductase- a NADP-dependent oxidoreductase 5203258 1793717 RB9657 Rhodopirellula baltica SH 1 dTDP-4-keto-L-6-deoxy-hexose 2,3-reductase- a NADP-dependent oxidoreductase NP_869004.1 5202179 D 243090 CDS NP_869005.1 32476011 1792899 complement(5203305..5203856) 1 NC_005027.1 best DB hits: BLAST: pir:D82155; hypothetical protein VC1816 [imported] - Vibrio cholerae; E=1e-16 ddbj:BAA89380.1; (AB025342) ORF6 [Moritella marina]; E=2e-15 pir:G75556; hypothetical protein - Deinococcus radiodurans (strain; E=2e-13 COG: DR0127; COG0666 Ankyrin repeat proteins; E=2e-14; hypothetical protein 5203856 1792899 RB9658 Rhodopirellula baltica SH 1 hypothetical protein NP_869005.1 5203305 R 243090 CDS NP_869006.1 32476012 1790874 complement(5203888..5204784) 1 NC_005027.1 best DB hits: BLAST: gb:AAG58178.1; AE005533_11 (AE005533) orf, hypothetical protein; E=1e-59 swissprot:P24197; YGID_ECOLI HYPOTHETICAL 29.9 KD PROTEIN IN; E=6e-59 pir:S22362; hypothetical protein C - Escherichia coli ----- gb:; E=1e-54 COG: ygiD; COG3384 Uncharacterized protein; E=6e-60; hypothetical protein 5204784 1790874 RB9659 Rhodopirellula baltica SH 1 hypothetical protein NP_869006.1 5203888 R 243090 CDS NP_869007.1 32476013 1793324 complement(5204810..5205271) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB05804.1; (AP001514) BH2085~unknown [Bacillus halodurans]; E=5e-19; membrane associated or secreted protein 5205271 1793324 RB9660 Rhodopirellula baltica SH 1 membrane associated or secreted protein NP_869007.1 5204810 R 243090 CDS NP_869008.1 32476014 1792355 5205359..5206723 1 NC_005027.1 best DB hits: BLAST: pir:T35901; probable araC family transcriptional regulator -; E=1e-17 swissprot:Q03320; ARAL_STRAT ARAC-LIKE TRANSCRIPTION; E=2e-16 swissprot:P35319; ARAL_STRLI ARAC-LIKE TRANSCRIPTION; E=2e-15 COG: ykgD; COG2207 AraC-type DNA-binding domain-containing proteins; E=2e-12 VCA1018_1; COG2169 Adenosine deaminase; E=3e-05 VCA1074; COG2207 AraC-type DNA-binding domain-containing proteins; E=3e-05 PFAM: PF00440; Bacterial regulatory proteins, tetR; E=0.37 PF00165; Bacterial regulatory helix-turn-heli; E=3.5e-25 PF01047; MarR family; E=0.25; AraC family transcriptional regulator 5206723 araC 1792355 araC Rhodopirellula baltica SH 1 AraC family transcriptional regulator NP_869008.1 5205359 D 243090 CDS NP_869009.1 32476015 1796205 5206898..5209192 1 NC_005027.1 PMID: 8830057 best DB hits: BLAST: gb:AAD05198.1; (U43163) inter-alpha-trypsin inhibitor family; E=3e-24 ddbj:BAA07602.1; (D38595) inter-alpha-trypsin inhibitor family; E=4e-24 ddbj:BAA07536.1; (D38535) PK-120 precursor [Homo sapiens]; E=8e-24 COG: sll0103; COG2304 Protein containing von Willebrand factor (vWF) type; E=1e-04 PFAM: PF02138; Beige/BEACH domain; E=0.089 PF00092; von Willebrand factor type A domain; E=0.084; inter-alpha-trypsin inhibitor domain-containing protein 5209192 1796205 RB9664 Rhodopirellula baltica SH 1 inter-alpha-trypsin inhibitor domain-containing protein NP_869009.1 5206898 D 243090 CDS NP_869010.1 32476016 1794438 5209189..5209872 1 NC_005027.1 best DB hits: PFAM: PF01694; Rhomboid family; E=0.038; hypothetical protein 5209872 1794438 RB9666 Rhodopirellula baltica SH 1 hypothetical protein NP_869010.1 5209189 D 243090 CDS NP_869011.1 32476017 1796395 complement(5209887..5210069) 1 NC_005027.1 hypothetical protein 5210069 1796395 RB9668 Rhodopirellula baltica SH 1 hypothetical protein NP_869011.1 5209887 R 243090 CDS NP_869012.1 32476018 1790827 complement(5210092..5210265) 1 NC_005027.1 hypothetical protein 5210265 1790827 RB9669 Rhodopirellula baltica SH 1 hypothetical protein NP_869012.1 5210092 R 243090 CDS NP_869013.1 32476019 1790994 complement(5210290..5211006) 1 NC_005027.1 best DB hits: BLAST: pir:E81971; hypothetical protein NMA0532 [imported] - Neisseria; E=0.079 pir:G81862; conserved hypothetical protein NMA1675 [imported] -; E=0.079 pir:F81882; hypothetical protein NMA1155 [imported] - Neisseria; E=0.17; hypothetical protein 5211006 1790994 RB9670 Rhodopirellula baltica SH 1 hypothetical protein NP_869013.1 5210290 R 243090 CDS NP_869014.1 32476020 1792227 5211126..5211281 1 NC_005027.1 hypothetical protein 5211281 1792227 RB9673 Rhodopirellula baltica SH 1 hypothetical protein NP_869014.1 5211126 D 243090 CDS NP_869015.1 32476021 1792056 5211283..5213163 1 NC_005027.1 catalyzes the removal of N-terminal dipeptides when proline is the penultimate residue; x-prolyl-dipeptidyl aminopeptidase 5213163 pepX 1792056 pepX Rhodopirellula baltica SH 1 x-prolyl-dipeptidyl aminopeptidase NP_869015.1 5211283 D 243090 CDS NP_869016.1 32476022 1795743 complement(5213215..5214558) 1 NC_005027.1 signal peptide 5214558 1795743 RB9676 Rhodopirellula baltica SH 1 signal peptide NP_869016.1 5213215 R 243090 CDS NP_869017.1 32476023 1795943 5214695..5216233 1 NC_005027.1 best DB hits: BLAST: gb:AAG54525.1; AE005198_6 (AE005198) Z0256 gene product; E=2e-16 pir:D83634; hypothetical protein PA0079 [imported] - Pseudomonas; E=3e-16 pir:E82499; hypothetical protein VCA0114 [imported] - Vibrio; E=2e-14; hypothetical protein 5216233 1795943 RB9679 Rhodopirellula baltica SH 1 hypothetical protein NP_869017.1 5214695 D 243090 CDS NP_869018.1 32476024 1794967 5216230..5216877 1 NC_005027.1 best DB hits: BLAST: pir:F83350; hypothetical protein PA2362 [imported] - Pseudomonas; E=3e-05 pir:G83437; hypothetical protein PA1668 [imported] - Pseudomonas; E=0.006; hypothetical protein 5216877 1794967 RB9684 Rhodopirellula baltica SH 1 hypothetical protein NP_869018.1 5216230 D 243090 CDS NP_869019.1 32476025 1792007 5216911..5218644 1 NC_005027.1 best DB hits: BLAST: embl:CAC05884.1; (AL391754) penicillin-binding protein; E=0.22; hypothetical protein 5218644 1792007 RB9685 Rhodopirellula baltica SH 1 hypothetical protein NP_869019.1 5216911 D 243090 CDS NP_869020.1 32476026 1796609 5218795..5219868 1 NC_005027.1 best DB hits: BLAST: pir:G83634; hypothetical protein PA0082 [imported] - Pseudomonas; E=1e-34 pir:D83350; hypothetical protein PA2360 [imported] - Pseudomonas; E=3e-10; hypothetical protein 5219868 1796609 RB9687 Rhodopirellula baltica SH 1 hypothetical protein NP_869020.1 5218795 D 243090 CDS NP_869021.1 32476027 1794609 5219934..5220461 1 NC_005027.1 best DB hits: BLAST: pir:H83634; conserved hypothetical protein PA0083 [imported] -; E=2e-54 gb:AAB92577.1; (AF037441) 19.5 kDa protein [Edwardsiella; E=7e-29 pir:A83351; conserved hypothetical protein PA2365 [imported] -; E=8e-28; hypothetical protein 5220461 1794609 RB9689 Rhodopirellula baltica SH 1 hypothetical protein NP_869021.1 5219934 D 243090 CDS NP_869022.1 32476028 1790063 5220509..5222011 1 NC_005027.1 best DB hits: BLAST: pir:A83635; conserved hypothetical protein PA0084 [imported] -; E=0.0 gb:AAB92576.1; (AF037441) 54.5 kDa protein [Edwardsiella; E=1e-110 pir:B83351; conserved hypothetical protein PA2366 [imported] -; E=1e-109; hypothetical protein 5222011 1790063 RB9690 Rhodopirellula baltica SH 1 hypothetical protein NP_869022.1 5220509 D 243090 CDS NP_869023.1 32476029 1789939 5222065..5222544 1 NC_005027.1 best DB hits: BLAST: pir:A83349; hypothetical protein PA2367 [imported] - Pseudomonas; E=9e-13 gb:AAB92575.1; (AF037441) 17.8 kDa protein [Edwardsiella; E=0.006 COG: PA2367; COG3157 Hemolysin-coregulated protein (uncharacterized); E=9e-14; hypothetical protein 5222544 1789939 RB9692 Rhodopirellula baltica SH 1 hypothetical protein NP_869023.1 5222065 D 243090 CDS NP_869024.1 32476030 1790135 5222556..5223110 1 NC_005027.1 best DB hits: BLAST: pir:D83635; hypothetical protein PA0087 [imported] - Pseudomonas; E=6e-06 gb:AAB92574.1; (AF037441) 18.8 kDa protein [Edwardsiella; E=1e-04; hypothetical protein 5223110 1790135 RB9693 Rhodopirellula baltica SH 1 hypothetical protein NP_869024.1 5222556 D 243090 CDS NP_869025.1 32476031 1796579 5223290..5225191 1 NC_005027.1 best DB hits: BLAST: pir:E83635; hypothetical protein PA0088 [imported] - Pseudomonas; E=1e-139 pir:C83349; hypothetical protein PA2369 [imported] - Pseudomonas; E=2e-61 pir:A82499; hypothetical protein VCA0110 [imported] - Vibrio; E=3e-40; hypothetical protein 5225191 1796579 RB9696 Rhodopirellula baltica SH 1 hypothetical protein NP_869025.1 5223290 D 243090 CDS NP_869026.1 32476032 1790459 5225279..5226328 1 NC_005027.1 best DB hits: BLAST: pir:F83635; hypothetical protein PA0089 [imported] - Pseudomonas; E=4e-31 pir:D83349; hypothetical protein PA2370 [imported] - Pseudomonas; E=1e-05 gb:AAG54528.1; AE005198_9 (AE005198) Z0259 gene product; E=0.001; hypothetical protein 5226328 1790459 RB9698 Rhodopirellula baltica SH 1 hypothetical protein NP_869026.1 5225279 D 243090 CDS NP_869027.1 32476033 1796177 5226252..5228345 1 NC_005027.1 best DB hits: BLAST: pir:H83635; conserved hypothetical protein PA0091 [imported] -; E=1e-104 pir:D83633; conserved hypothetical protein PA0095 [imported] -; E=1e-101 pir:G83310; conserved hypothetical protein PA2685 [imported] -; E=5e-97; hypothetical protein 5228345 1796177 RB9699 Rhodopirellula baltica SH 1 hypothetical protein NP_869027.1 5226252 D 243090 CDS NP_869028.1 32476034 1795368 5228428..5229342 1 NC_005027.1 hypothetical protein 5229342 1795368 RB9700 Rhodopirellula baltica SH 1 hypothetical protein NP_869028.1 5228428 D 243090 CDS NP_869029.1 32476035 1793473 5229342..5229632 1 NC_005027.1 best DB hits: BLAST: pir:H83542; hypothetical protein PA0824 [imported] - Pseudomonas; E=0.042 pir:F82478; hypothetical protein VCA0284 [imported] - Vibrio; E=0.18 gb:AAG54900.1; AE005236_1 (AE005236) Z0705 gene product; E=0.36; hypothetical protein 5229632 1793473 RB9702 Rhodopirellula baltica SH 1 hypothetical protein NP_869029.1 5229342 D 243090 CDS NP_869030.1 32476036 1793245 5229636..5234027 1 NC_005027.1 hypothetical protein 5234027 1793245 RB9704 Rhodopirellula baltica SH 1 hypothetical protein NP_869030.1 5229636 D 243090 CDS NP_869031.1 32476037 1796648 5234044..5234844 1 NC_005027.1 hypothetical protein 5234844 1796648 RB9707 Rhodopirellula baltica SH 1 hypothetical protein NP_869031.1 5234044 D 243090 CDS NP_869032.1 32476038 1793970 complement(5235132..5240027) 1 NC_005027.1 best DB hits: PFAM: PF02869; Eukaryotic initiation factor 5A hypu; E=0.64 PF00092; von Willebrand factor type A domain; E=0.00092; hypothetical protein 5240027 1793970 RB9710 Rhodopirellula baltica SH 1 hypothetical protein NP_869032.1 5235132 R 243090 CDS NP_869033.1 32476039 1796017 complement(5240049..5243297) 1 NC_005027.1 best DB hits: BLAST: pir:T36423; probable large, multifunctional secreted protein -; E=8e-23 embl:CAB45032.1; (AL078635) large multi-functional protein; E=2e-22 pir:C75617; probable oxidoreductase - Deinococcus radiodurans; E=0.40 PFAM: PF01436; NHL repeat; E=0.1; large, multifunctional secreted protein 5243297 1796017 RB9713 Rhodopirellula baltica SH 1 large, multifunctional secreted protein NP_869033.1 5240049 R 243090 CDS NP_869034.1 32476040 1796381 complement(5243612..5243833) 1 NC_005027.1 hypothetical protein 5243833 1796381 RB9717 Rhodopirellula baltica SH 1 hypothetical protein NP_869034.1 5243612 R 243090 CDS NP_869035.1 32476041 1795781 5243888..5244346 1 NC_005027.1 hypothetical protein 5244346 1795781 RB9720 Rhodopirellula baltica SH 1 hypothetical protein NP_869035.1 5243888 D 243090 CDS NP_869036.1 32476042 1797158 complement(5244321..5246186) 1 NC_005027.1 best DB hits: BLAST: swissprot:O67293; YC50_AQUAE HYPOTHETICAL PROTEIN AQ_1250 -----; E=2e-09 swissprot:Q9Z729; Y877_CHLPN HYPOTHETICAL PROTEIN CPN0877CP0992; E=2e-07 swissprot:O26373; Y273_METTH HYPOTHETICAL PROTEIN MTH273 -----; E=4e-07 COG: aq_1250; COG1881 Phospholipid-binding protein; E=2e-10; phospholipid-binding protein 5246186 1797158 RB9722 Rhodopirellula baltica SH 1 phospholipid-binding protein NP_869036.1 5244321 R 243090 CDS NP_869037.1 32476043 1791459 complement(5246183..5246920) 1 NC_005027.1 signal peptide 5246920 1791459 RB9724 Rhodopirellula baltica SH 1 signal peptide NP_869037.1 5246183 R 243090 CDS NP_869038.1 32476044 1792041 complement(5246921..5247988) 1 NC_005027.1 hypothetical protein 5247988 1792041 RB9725 Rhodopirellula baltica SH 1 hypothetical protein NP_869038.1 5246921 R 243090 CDS NP_869039.1 32476045 1791336 complement(5247985..5248503) 1 NC_005027.1 PMID: 8052622 best DB hits: BLAST: swissprot:P46358; RFAY_XANCP PROBABLE RNA POLYMERASE SIGMA FACTOR; E=5e-05 swissprot:P37978; CNRH_ALCEU RNA POLYMERASE SIGMA FACTOR CNRH; E=9e-04 pir:C69826; RNA polymerase ECF-type sigma factor homolog yhdM -; E=0.001 COG: BS_yhdM; COG1595 DNA-directed RNA polymerase specialized sigma; E=1e-04 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=4.8e-07; RNA polymerase sigma factor rfaY 5248503 rfaY 1791336 rfaY Rhodopirellula baltica SH 1 RNA polymerase sigma factor rfaY NP_869039.1 5247985 R 243090 CDS NP_869040.1 32476046 1793647 5248458..5248703 1 NC_005027.1 hypothetical protein 5248703 1793647 RB9731 Rhodopirellula baltica SH 1 hypothetical protein NP_869040.1 5248458 D 243090 CDS NP_869041.1 32476047 1794651 5248700..5250529 1 NC_005027.1 best DB hits: BLAST: pir:B82698; gluconolactonase precursor XF1297 [imported] - Xylella; E=4e-05 embl:CAB59581.1; (AL132662) possible gluconolactonase precursor; E=0.028 pir:B83340; hypothetical protein PA2451 [imported] - Pseudomonas; E=0.036 COG: XF1297; COG3386 Uncharacterized protein; E=4e-06 PA2451; COG2382 Enterochelin esterase and related enzymes; E=0.003; gluconolactonase 5250529 1794651 RB9732 Rhodopirellula baltica SH 1 gluconolactonase NP_869041.1 5248700 D 243090 CDS NP_869042.1 32476048 1794658 complement(5250678..5250788) 1 NC_005027.1 hypothetical protein 5250788 1794658 RB9736 Rhodopirellula baltica SH 1 hypothetical protein NP_869042.1 5250678 R 243090 CDS NP_869043.1 32476049 1794959 5250930..5251292 1 NC_005027.1 hypothetical protein 5251292 1794959 RB9737 Rhodopirellula baltica SH 1 hypothetical protein NP_869043.1 5250930 D 243090 CDS NP_869044.1 32476050 1791559 5251375..5251554 1 NC_005027.1 hypothetical protein 5251554 1791559 RB9739 Rhodopirellula baltica SH 1 hypothetical protein NP_869044.1 5251375 D 243090 CDS NP_869045.1 32476051 1796554 complement(5251409..5251600) 1 NC_005027.1 hypothetical protein 5251600 1796554 RB9740 Rhodopirellula baltica SH 1 hypothetical protein NP_869045.1 5251409 R 243090 CDS NP_869046.1 32476052 1796417 complement(5251548..5252279) 1 NC_005027.1 hypothetical protein 5252279 1796417 RB9742 Rhodopirellula baltica SH 1 hypothetical protein NP_869046.1 5251548 R 243090 CDS NP_869047.1 32476053 1797160 complement(5252292..5252417) 1 NC_005027.1 hypothetical protein 5252417 1797160 RB9744 Rhodopirellula baltica SH 1 hypothetical protein NP_869047.1 5252292 R 243090 CDS NP_869048.1 32476054 1792339 5252442..5254412 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=1e-33 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=1e-32 pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=1e-32 COG: BH2504_1; COG0515 Serine/threonine protein kinases; E=1e-34 PFAM: PF00069; Protein kinase domain; E=2.6e-53; serine/threonine protein kinase 5254412 pknB 1792339 pknB Rhodopirellula baltica SH 1 serine/threonine protein kinase NP_869048.1 5252442 D 243090 CDS NP_869049.1 32476055 1791991 5254530..5254748 1 NC_005027.1 hypothetical protein 5254748 1791991 RB9747 Rhodopirellula baltica SH 1 hypothetical protein NP_869049.1 5254530 D 243090 CDS NP_869050.1 32476056 1791612 5254745..5255845 1 NC_005027.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 5255845 1791612 RB9748 Rhodopirellula baltica SH 1 dihydroorotate dehydrogenase 2 NP_869050.1 5254745 D 243090 CDS NP_869051.1 32476057 1796738 5255923..5256858 1 NC_005027.1 signal peptide 5256858 1796738 RB9751 Rhodopirellula baltica SH 1 signal peptide NP_869051.1 5255923 D 243090 CDS NP_869052.1 32476058 1791190 complement(5256855..5257259) 1 NC_005027.1 hypothetical protein 5257259 1791190 RB9752 Rhodopirellula baltica SH 1 hypothetical protein NP_869052.1 5256855 R 243090 CDS NP_869053.1 32476059 1796692 complement(5257623..5259401) 1 NC_005027.1 PMID: 7910580 PMID: 1572648 best DB hits: BLAST: pdb:1E2S; P Chain P, Crystal Structure Of An Arylsulfatase A; E=5e-34 pdb:1AUK; Human Arylsulfatase A; E=6e-34 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=7e-34 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=9e-32 TM1703; COG1368 Phosphoglycerol transferase and related proteins,; E=0.008 PFAM: PF00884; Sulfatase; E=4.8e-55; arylsulfatase 5259401 arsA 1796692 arsA Rhodopirellula baltica SH 1 arylsulfatase NP_869053.1 5257623 R 243090 CDS NP_869054.1 32476060 1792237 complement(5259412..5259519) 1 NC_005027.1 hypothetical protein 5259519 1792237 RB9757 Rhodopirellula baltica SH 1 hypothetical protein NP_869054.1 5259412 R 243090 CDS NP_869055.1 32476061 1796386 complement(5259536..5259928) 1 NC_005027.1 hypothetical protein 5259928 1796386 RB9758 Rhodopirellula baltica SH 1 hypothetical protein NP_869055.1 5259536 R 243090 CDS NP_869056.1 32476062 1794335 5260004..5260363 1 NC_005027.1 signal peptide 5260363 1794335 RB9761 Rhodopirellula baltica SH 1 signal peptide NP_869056.1 5260004 D 243090 CDS NP_869057.1 32476063 1795319 complement(5260845..5263346) 1 NC_005027.1 PMID: 11544236 best DB hits: BLAST: gb:AAK02042.1; AF261825_11 (AF261825) hypothetical protein; E=2e-97 PFAM: PF02662; Methyl-viologen-reducing hydrogenase; E=0.091; subtilisin proteinase-like protein 5263346 1795319 RB9765 Rhodopirellula baltica SH 1 subtilisin proteinase-like protein NP_869057.1 5260845 R 243090 CDS NP_869058.1 32476064 1790079 complement(5263361..5264383) 1 NC_005027.1 PMID: 11544236 best DB hits: BLAST: gb:AAK02043.1; AF261825_12 (AF261825) ATPase [Salmonella; E=3e-67 swissprot:P55530; Y4KL_RHISN HYPOTHETICAL 37.6 KD AAA-FAMILY; E=2e-41 gb:AAA64864.1; (U23723) orf300 [Escherichia coli]; E=9e-32 COG: HP1069; COG0465 ATP-dependent Zn proteases; E=4e-24 AF0477; COG0464 ATPases of the AAA+ class; E=3e-23 Cj1116c; COG0465 ATP-dependent Zn proteases; E=5e-22 PFAM: PF00406; Adenylate kinase; E=0.57 PF00071; Ras family; E=0.09 PF01202; Shikimate kinase; E=0.028; ATPase 5264383 1790079 RB9766 Rhodopirellula baltica SH 1 ATPase NP_869058.1 5263361 R 243090 CDS NP_869059.1 32476065 1796217 5264348..5264641 1 NC_005027.1 hypothetical protein 5264641 1796217 RB9767 Rhodopirellula baltica SH 1 hypothetical protein NP_869059.1 5264348 D 243090 CDS NP_869060.1 32476066 1791374 complement(5264812..5264970) 1 NC_005027.1 hypothetical protein 5264970 1791374 RB9768 Rhodopirellula baltica SH 1 hypothetical protein NP_869060.1 5264812 R 243090 CDS NP_869061.1 32476067 1795671 complement(5264970..5265335) 1 NC_005027.1 best DB hits: BLAST: pir:F83457; hypothetical protein PA1506 [imported] - Pseudomonas; E=9e-13 COG: PA1506; COG0394 Protein-tyrosine-phosphatase; E=9e-14 PFAM: PF01451; Low molecular weight phosphotyrosine; E=0.00019; phosphotyrosine protein phosphatase 5265335 1795671 RB9769 Rhodopirellula baltica SH 1 phosphotyrosine protein phosphatase NP_869061.1 5264970 R 243090 CDS NP_869062.1 32476068 1796080 complement(5265332..5265928) 1 NC_005027.1 best DB hits: BLAST: embl:CAB76298.1; (AL158057) hypothetical protein SC10G8.25c.; E=8e-33 pir:A82207; conserved hypothetical protein VC1377 [imported] -; E=2e-12 pir:E83447; hypothetical protein PA1575 [imported] - Pseudomonas; E=5e-10 PFAM: PF00929; Exonuclease; E=1.8e-09; exonuclease 5265928 1796080 RB9771 Rhodopirellula baltica SH 1 exonuclease NP_869062.1 5265332 R 243090 CDS NP_869063.1 32476069 1795221 5265889..5266926 1 NC_005027.1 PMID: 11759840; hypothetical protein 5266926 1795221 RB9772 Rhodopirellula baltica SH 1 hypothetical protein NP_869063.1 5265889 D 243090 CDS NP_869064.1 32476070 1793915 complement(5267010..5267189) 1 NC_005027.1 hypothetical protein 5267189 1793915 RB9774 Rhodopirellula baltica SH 1 hypothetical protein NP_869064.1 5267010 R 243090 CDS NP_869065.1 32476071 1795617 5267553..5268920 1 NC_005027.1 hypothetical protein 5268920 1795617 RB9779 Rhodopirellula baltica SH 1 hypothetical protein NP_869065.1 5267553 D 243090 CDS NP_869066.1 32476072 1791934 complement(5268914..5269594) 1 NC_005027.1 signal peptide 5269594 1791934 RB9782 Rhodopirellula baltica SH 1 signal peptide NP_869066.1 5268914 R 243090 CDS NP_869067.1 32476073 1790417 complement(5269555..5270166) 1 NC_005027.1 hypothetical protein 5270166 1790417 RB9784 Rhodopirellula baltica SH 1 hypothetical protein NP_869067.1 5269555 R 243090 CDS NP_869068.1 32476074 1791638 complement(5270205..5270645) 1 NC_005027.1 hypothetical protein 5270645 1791638 RB9786 Rhodopirellula baltica SH 1 hypothetical protein NP_869068.1 5270205 R 243090 CDS NP_869069.1 32476075 1790133 complement(5270719..5270904) 1 NC_005027.1 hypothetical protein 5270904 1790133 RB9787 Rhodopirellula baltica SH 1 hypothetical protein NP_869069.1 5270719 R 243090 CDS NP_869070.1 32476076 1791030 5270809..5271042 1 NC_005027.1 hypothetical protein 5271042 1791030 RB9788 Rhodopirellula baltica SH 1 hypothetical protein NP_869070.1 5270809 D 243090 CDS NP_869071.1 32476077 1795720 complement(5271138..5271476) 1 NC_005027.1 PMID: 2307677 best DB hits: BLAST: swissprot:P32084; YHIT_SYNP7 HYPOTHETICAL 12.4 KD HIT-LIKE PROTEIN; E=5e-34 pir:A35350; protein kinase C inhibitor - bovine; E=8e-34 gb:AAA18398.1; (U09407) protein kinase C inhibitor; E=8e-34 COG: slr1234; COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and; E=6e-33 ycfF; COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other; E=9e-26 XF1810; COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and; E=1e-21 PFAM: PF01230; HIT family; E=6e-59; protein kinase C inhibitor 5271476 1795720 RB9790 Rhodopirellula baltica SH 1 protein kinase C inhibitor NP_869071.1 5271138 R 243090 CDS NP_869072.1 32476078 1792948 5271583..5272542 1 NC_005027.1 PMID: 1741263 best DB hits: BLAST: ddbj:BAB06751.1; (AP001517) DNA repair protein [Bacillus; E=6e-32 swissprot:Q02170; RADC_BACSU DNA REPAIR PROTEIN RADC HOMOLOG; E=9e-32 swissprot:Q9X1P3; RADC_THEMA DNA REPAIR PROTEIN RADC HOMOLOG; E=1e-30 COG: BH3032; COG2003 DNA repair proteins; E=5e-33; DNA repair protein 5272542 radC 1792948 radC Rhodopirellula baltica SH 1 DNA repair protein NP_869072.1 5271583 D 243090 CDS NP_869073.1 32476079 1791594 5272603..5272740 1 NC_005027.1 hypothetical protein 5272740 1791594 RB9792 Rhodopirellula baltica SH 1 hypothetical protein NP_869073.1 5272603 D 243090 CDS NP_869074.1 32476080 1794924 complement(5272850..5273041) 1 NC_005027.1 hypothetical protein 5273041 1794924 RB9793 Rhodopirellula baltica SH 1 hypothetical protein NP_869074.1 5272850 R 243090 CDS NP_869075.1 32476081 1796336 complement(5273274..5273591) 1 NC_005027.1 PMID: 7590157 PMID: 9733647 best DB hits: BLAST: swissprot:Q10960; GLNB_MYCTU NITROGEN REGULATORY PROTEIN P-II; E=5e-16 swissprot:O30794; GLNB_NOSPU NITROGEN REGULATORY PROTEIN P-II (PII; E=4e-15 swissprot:P80016; GLNB_SYNP7 NITROGEN REGULATORY PROTEIN P-II (PII; E=5e-15 COG: Rv2919c; COG0347 Nitrogen regulatory protein PII; E=5e-17 PFAM: PF00543; Nitrogen regulatory protein P-II; E=1.2e-10; nitrogen regulatory protein P-II 5273591 glnB 1796336 glnB Rhodopirellula baltica SH 1 nitrogen regulatory protein P-II NP_869075.1 5273274 R 243090 CDS NP_869076.1 32476082 1796322 complement(5273623..5274642) 1 NC_005027.1 best DB hits: BLAST: swissprot:O67716; DHAS_AQUAE ASPARTATE-SEMIALDEHYDE DEHYDROGENASE; E=1e-78 swissprot:Q04797; DHAS_BACSU ASPARTATE-SEMIALDEHYDE DEHYDROGENASE; E=4e-78 pir:D46665; aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) -; E=9e-78 COG: aq_1866; COG0136 Aspartate-semialdehyde dehydrogenase; E=1e-79 PFAM: PF01118; Semialdehyde dehydrogenase, N; E=9.5e-36 PF02774; Semialdehyde dehydrogenase, d; E=5.2e-65; aspartate-semialdehyde dehydrogenase 5274642 asd 1796322 asd Rhodopirellula baltica SH 1 aspartate-semialdehyde dehydrogenase NP_869076.1 5273623 R 243090 CDS NP_869077.1 32476083 1796558 complement(5274691..5275002) 1 NC_005027.1 hypothetical protein 5275002 1796558 RB9797 Rhodopirellula baltica SH 1 hypothetical protein NP_869077.1 5274691 R 243090 CDS NP_869078.1 32476084 1793131 complement(5275172..5276314) 1 NC_005027.1 hypothetical protein 5276314 1793131 RB9798 Rhodopirellula baltica SH 1 hypothetical protein NP_869078.1 5275172 R 243090 CDS NP_869079.1 32476085 1795479 complement(5276364..5276618) 1 NC_005027.1 hypothetical protein 5276618 1795479 RB9800 Rhodopirellula baltica SH 1 hypothetical protein NP_869079.1 5276364 R 243090 CDS NP_869080.1 32476086 1796413 5276520..5276741 1 NC_005027.1 hypothetical protein 5276741 1796413 RB9801 Rhodopirellula baltica SH 1 hypothetical protein NP_869080.1 5276520 D 243090 CDS NP_869081.1 32476087 1793548 5276839..5280519 1 NC_005027.1 PMID: 8426613 best DB hits: BLAST: gb:AAA70381.1; (L05069) circumsporozoite protein [Plasmodium; E=0.15 pir:A41156; circumsporozoite protein - Plasmodium vivax (isolate; E=0.35 embl:CAB58111.1; (AL121806) prediction=(method:''genefinder'',; E=0.48; circumsporozoite protein- membrane associated protein 5280519 1793548 RB9805 Rhodopirellula baltica SH 1 circumsporozoite protein- membrane associated protein NP_869081.1 5276839 D 243090 CDS NP_869082.1 32476088 1795865 5280590..5281087 1 NC_005027.1 signal peptide 5281087 1795865 RB9806 Rhodopirellula baltica SH 1 signal peptide NP_869082.1 5280590 D 243090 CDS NP_869083.1 32476089 1792217 5281208..5282749 1 NC_005027.1 PMID: 9457884 best DB hits: BLAST: pir:S75721; hypothetical protein slr0904 - Synechocystis sp. (strain; E=1e-117 pir:G72368; comM protein - Thermotoga maritima (strain MSB8) -----; E=1e-113 pir:C75370; Mg(2+) chelatase - Deinococcus; E=1e-111 COG: slr0904; COG0606 Predicted ATPases; E=1e-118 BH3051; COG1067 Predicted ATP-dependent protease; ATPase domain; E=7e-06 MTH556; COG1239 Mg-chelatase subunit ChlI; E=5e-04 PFAM: PF01078; Magnesium chelatase, subunit; E=1.2e-10 PF01202; Shikimate kinase; E=0.29 PF01695; IstB-like ATP binding protein; E=0.57; comM protein 5282749 comM 1792217 comM Rhodopirellula baltica SH 1 comM protein NP_869083.1 5281208 D 243090 CDS NP_869084.1 32476090 1793937 complement(5282685..5283128) 1 NC_005027.1 hypothetical protein 5283128 1793937 RB9809 Rhodopirellula baltica SH 1 hypothetical protein NP_869084.1 5282685 R 243090 CDS NP_869085.1 32476091 1790514 5283122..5284438 1 NC_005027.1 best DB hits: BLAST: gb:AAD38020.1; AF148127_1 (AF148127) transposase [Porphyromonas; E=2e-13 ddbj:BAA83477.1; (AB009361) transposase [Porphyromonas; E=3e-13 ddbj:BAA92234.1; (AB031551) transposase [Bacillus subtilis]; E=4e-10 COG: BH0691; COG3385 Predicted transposase; E=4e-10 PFAM: PF01609; Transposase (IS4 family); E=6.2e-08; transposase 5284438 1790514 RB9810 Rhodopirellula baltica SH 1 transposase NP_869085.1 5283122 D 243090 CDS NP_869086.1 32476092 1791808 5284365..5284673 1 NC_005027.1 hypothetical protein 5284673 1791808 RB9811 Rhodopirellula baltica SH 1 hypothetical protein NP_869086.1 5284365 D 243090 CDS NP_869087.1 32476093 1793891 complement(5284638..5285123) 1 NC_005027.1 best DB hits: BLAST: pir:T00198; vp80 protein - Leucania separata nuclear polyhedrosis; E=0.39; hypothetical protein 5285123 1793891 RB9813 Rhodopirellula baltica SH 1 hypothetical protein NP_869087.1 5284638 R 243090 CDS NP_869088.1 32476094 1792100 complement(5285340..5288765) 1 NC_005027.1 hypothetical protein 5288765 1792100 RB9817 Rhodopirellula baltica SH 1 hypothetical protein NP_869088.1 5285340 R 243090 CDS NP_869089.1 32476095 1796401 complement(5288732..5289274) 1 NC_005027.1 best DB hits: BLAST: pir:B82065; conserved hypothetical protein VC2524 [imported] -; E=9e-28 embl:CAC12689.1; (AJ272115) hypothetical protein [Thauera; E=6e-26 pir:B83087; conserved hypothetical protein PA4458 [imported] -; E=7e-26 COG: VC2524; COG1778 Uncharacterized proteins of HAD superfamily,; E=8e-29 APE0766; COG0561 Predicted hydrolases of the HAD superfamily; E=6e-05; hypothetical protein 5289274 1796401 RB9821 Rhodopirellula baltica SH 1 hypothetical protein NP_869089.1 5288732 R 243090 CDS NP_869090.1 32476096 1794381 complement(5289276..5290535) 1 NC_005027.1 best DB hits: BLAST: swissprot:O67500; YF46_AQUAE HYPOTHETICAL PROTEIN AQ_1546 -----; E=3e-47 swissprot:P45313; YRBH_HAEIN HYPOTHETICAL PROTEIN HI1678 -----; E=2e-46 gb:AAK02609.1; (AE006087) KpsF [Pasteurella multocida]; E=3e-43 COG: aq_1546_1; COG0794 Predicted sugar phosphate isomerase involved in; E=7e-37 APE1838; COG0517 CBS domains; E=2e-08 PFAM: PF01380; SIS domain; E=1.1e-28 PF00571; CBS domain; E=0.059; hypothetical protein 5290535 1794381 RB9823 Rhodopirellula baltica SH 1 hypothetical protein NP_869090.1 5289276 R 243090 CDS NP_869091.1 32476097 1796385 complement(5290549..5291328) 1 NC_005027.1 best DB hits: BLAST: pir:G83105; hypothetical protein PA4318 [imported] - Pseudomonas; E=2e-12 ddbj:BAB04453.1; (AP001509) BH0734~unknown conserved protein; E=3e-04 pir:S74573; hypothetical protein slr0254 - Synechocystis sp. (strain; E=4e-04 COG: PA4318; COG1714 Uncharacterized membrane protein/domain; E=2e-13; hypothetical protein 5291328 1796385 RB9826 Rhodopirellula baltica SH 1 hypothetical protein NP_869091.1 5290549 R 243090 CDS NP_869092.1 32476098 1796573 5291466..5293130 1 NC_005027.1 best DB hits: BLAST: gb:AAK02765.1; (AE006104) unknown [Pasteurella multocida]; E=0.006 gb:AAD41078.1; AF141204_1 (AF141204) Nramp2 [Arabidopsis thaliana]; E=0.014 gb:AAG52643.1; AC079677_7 (AC079677) stress response protein; E=0.014 COG: NMB1426; COG1914 Mn2+ and Fe2+ transporters of the NRAMP family; E=0.002 BS_ycsG; COG0591 Na+/proline, Na+/panthothenate symporters and; E=0.008; transmembrane Mn(2+) transporter 5293130 1796573 RB9828 Rhodopirellula baltica SH 1 transmembrane Mn(2+) transporter NP_869092.1 5291466 D 243090 CDS NP_869093.1 32476099 1795208 complement(5293111..5293341) 1 NC_005027.1 hypothetical protein 5293341 1795208 RB9830 Rhodopirellula baltica SH 1 hypothetical protein NP_869093.1 5293111 R 243090 CDS NP_869094.1 32476100 1795397 complement(5293371..5294813) 1 NC_005027.1 best DB hits: BLAST: pir:E71082; probable phospho-sugar mutase 2 - Pyrococcus horikoshii; E=1e-60 pir:H75104; phosphomannomutase (pmm) PAB0819 - Pyrococcus abyssi; E=7e-58 gb:AAB90779.1; (AE001073) phosphomannomutase (pmm) [Archaeoglobus; E=5e-53 COG: PH0923; COG1109 Phosphomannomutase; E=1e-61 PFAM: PF02878; Phosphoglucomutase/phosphomannomu; E=4.1e-29 PF02879; Phosphoglucomutase/phosphomannomu; E=1.2e-15 PF02880; Phosphoglucomutase/phosphomannomu; E=0.00028; phosphomannomutase (pmm) 5294813 1795397 RB9832 Rhodopirellula baltica SH 1 phosphomannomutase (pmm) NP_869094.1 5293371 R 243090 CDS NP_869095.1 32476101 1793558 5294812..5296632 1 NC_005027.1 PMID: 9651254 PMID: 10215859 PMID: 10848995 PMID: 11073907 best DB hits: BLAST: gb:AAG32950.1; (AF032114) formylmethanofuran; E=6e-98 pir:S57456; formylmethanofuran dehydrogenase (EC 1.2.99.5); E=8e-72 pir:G69074; formylmethanofuran dehydrogenase (EC 1.2.99.5); E=3e-71 COG: MTH1557; COG1229 Formylmethanofuran dehydrogenase subunit A; E=3e-72 PFAM: PF02612; N-acetylglucosamine-6-phosphat; E=0.0077; formylmethanofuran dehydrogenase subunit A 5296632 fwdA 1793558 fwdA Rhodopirellula baltica SH 1 formylmethanofuran dehydrogenase subunit A NP_869095.1 5294812 D 243090 CDS NP_869096.1 32476102 1794930 5296625..5297629 1 NC_005027.1 catalyzes the transfer of a formyl group from formylmethanofuran to tetrahydromethanopterin tetrahydromethanopterin; formylmethanofuran--tetrahydromethanopterin formyltransferase 5297629 ffsA 1794930 ffsA Rhodopirellula baltica SH 1 formylmethanofuran--tetrahydromethanopterin formyltransferase NP_869096.1 5296625 D 243090 CDS NP_869097.1 32476103 1796313 5297626..5298417 1 NC_005027.1 PMID: 8575452 best DB hits: BLAST: gb:AAB89324.1; (AE000970) tungsten formylmethanofuran; E=2e-17 pir:T45154; probable formylmethanofuran dehydrogenase (EC 1.2.99.5); E=3e-17 swissprot:Q59579; FWDC_METTM TUNGSTEN-CONTAINING; E=2e-14 COG: AF1931; COG2218 Formylmethanofuran dehydrogenase subunit C; E=2e-18 TM0394; COG0070 Glutamate synthetase domain 3; E=2e-06 MJ0658; COG2218 Formylmethanofuran dehydrogenase subunit C; E=0.001 PFAM: PF01493; Domain of unknown function DUF14; E=1.3e-06; tungsten formylmethanofuran dehydrogenase, subunit C (fwdC) 5298417 fwdC 1796313 fwdC Rhodopirellula baltica SH 1 tungsten formylmethanofuran dehydrogenase, subunit C (fwdC) NP_869097.1 5297626 D 243090 CDS NP_869098.1 32476104 1791496 complement(5298462..5298938) 1 NC_005027.1 hypothetical protein 5298938 1791496 RB9838 Rhodopirellula baltica SH 1 hypothetical protein NP_869098.1 5298462 R 243090 CDS NP_869099.1 32476105 1796428 complement(5299011..5299172) 1 NC_005027.1 hypothetical protein 5299172 1796428 RB9839 Rhodopirellula baltica SH 1 hypothetical protein NP_869099.1 5299011 R 243090 CDS NP_869100.1 32476106 1796681 5299200..5301809 1 NC_005027.1 PMID: 7968523 best DB hits: BLAST: pir:B75346; probable competence protein ComECRec2 - Deinococcus; E=2e-19 ddbj:BAA12454.1; (D84432) ComEC [Bacillus subtilis] -----; E=3e-19 swissprot:P39695; CME3_BACSU COME OPERON PROTEIN 3 ----- pir:; E=1e-18 COG: DR1854_2; COG2333 Predicted hydrolases of metallo-beta-lactamase; E=3e-16 BH1335_1; COG0658 Predicted multitransmembrane, metal-binding; E=5e-13 PA2984_2; COG2333 Predicted hydrolases of metallo-beta-lactamase; E=5e-09 PFAM: PF00753; Metallo-beta-lactamase superfamil; E=1.5e-07; competence protein ComEC 5301809 comE 1796681 comE Rhodopirellula baltica SH 1 competence protein ComEC NP_869100.1 5299200 D 243090 CDS NP_869101.1 32476107 1794903 5301844..5302797 1 NC_005027.1 hypothetical protein 5302797 1794903 RB9844 Rhodopirellula baltica SH 1 hypothetical protein NP_869101.1 5301844 D 243090 CDS NP_869102.1 32476108 1796251 5302794..5304074 1 NC_005027.1 PMID: 2110138 best DB hits: BLAST: swissprot:P16618; HEM1_BACSU GLUTAMYL-TRNA REDUCTASE (GLUTR); E=4e-56 swissprot:P42807; HEM1_PSEAE GLUTAMYL-TRNA REDUCTASE (GLUTR); E=1e-54 ddbj:BAB06767.1; (AP001517) glutamyl-tRNA reductase [Bacillus; E=8e-53 COG: BS_hemA; COG0373 Glutamyl-tRNA reductase; E=4e-57 PFAM: PF01089; Delta 1-pyrroline-5-carboxyla; E=0.55 PF01408; Oxidoreductase, NAD-bi; E=4.2e-05 PF01488; Shikimate / quinate 5-dehydro; E=7.6e-05; glutamyl-tRNA reductase 5304074 hemA 1796251 hemA Rhodopirellula baltica SH 1 glutamyl-tRNA reductase NP_869102.1 5302794 D 243090 CDS NP_869103.1 32476109 1796064 5304088..5304933 1 NC_005027.1 best DB hits: BLAST: pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=3e-04; hypothetical protein 5304933 1796064 RB9849 Rhodopirellula baltica SH 1 hypothetical protein NP_869103.1 5304088 D 243090 CDS NP_869104.1 32476110 1792130 5304982..5305653 1 NC_005027.1 PMID: 8052622 best DB hits: BLAST: swissprot:P37978; CNRH_ALCEU RNA POLYMERASE SIGMA FACTOR CNRH; E=5e-04 pir:G83282; probable sigma-70 factor, ECF subfamily PA2896; E=0.008 pir:S74832; transcription initiation factor sigma E sll0856 -; E=0.055 COG: PA2896; COG1595 DNA-directed RNA polymerase specialized sigma; E=8e-04 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=0.028 PF00140; Sigma-70 factor; E=0.028; RNA polymerase sigma factor cnrH 5305653 cnrH 1792130 cnrH Rhodopirellula baltica SH 1 RNA polymerase sigma factor cnrH NP_869104.1 5304982 D 243090 CDS NP_869105.1 32476111 1795770 5305661..5307355 1 NC_005027.1 best DB hits: BLAST: pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=4e-44 swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=5e-44 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=3e-43 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=3e-44 PFAM: PF00069; Protein kinase domain; E=2.2e-48; serine/threonine protein kinase 5307355 pknB 1795770 pknB Rhodopirellula baltica SH 1 serine/threonine protein kinase NP_869105.1 5305661 D 243090 CDS NP_869106.1 32476112 1793880 complement(5307599..5308990) 1 NC_005027.1 best DB hits: BLAST: pir:E71127; hypothetical protein PH0786 - Pyrococcus horikoshii; E=0.013 pir:T32472; hypothetical protein F08F1.7 - Caenorhabditis elegans; E=0.87 PFAM: PF02366; Dolichyl-phosphate-mannose-prote; E=0.00021; transmembrane protein 5308990 1793880 RB9855 Rhodopirellula baltica SH 1 transmembrane protein NP_869106.1 5307599 R 243090 CDS NP_869107.1 32476113 1791598 complement(5308914..5312654) 1 NC_005027.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 5312654 metH 1791598 metH Rhodopirellula baltica SH 1 B12-dependent methionine synthase NP_869107.1 5308914 R 243090 CDS NP_869108.1 32476114 1795433 5312605..5312790 1 NC_005027.1 hypothetical protein 5312790 1795433 RB9858 Rhodopirellula baltica SH 1 hypothetical protein NP_869108.1 5312605 D 243090 CDS NP_869109.1 32476115 1796092 complement(5312651..5312860) 1 NC_005027.1 hypothetical protein 5312860 1796092 RB9859 Rhodopirellula baltica SH 1 hypothetical protein NP_869109.1 5312651 R 243090 CDS NP_869110.1 32476116 1796508 5312803..5313810 1 NC_005027.1 best DB hits: BLAST: embl:CAC01649.1; (AL391072) conserved hypothetical protein; E=2e-34 embl:CAB55712.1; (AL117387) hypothetical protein SCF41.09; E=2e-29 swissprot:P55567; Y4MH_RHISN HYPOTHETICAL 33.9 KD PROTEIN Y4MH; E=2e-15; hypothetical protein 5313810 1796508 RB9860 Rhodopirellula baltica SH 1 hypothetical protein NP_869110.1 5312803 D 243090 CDS NP_869111.1 32476117 1796437 5313829..5314125 1 NC_005027.1 hypothetical protein 5314125 1796437 RB9861 Rhodopirellula baltica SH 1 hypothetical protein NP_869111.1 5313829 D 243090 CDS NP_869112.1 32476118 1793159 5314129..5314242 1 NC_005027.1 hypothetical protein 5314242 1793159 RB9863 Rhodopirellula baltica SH 1 hypothetical protein NP_869112.1 5314129 D 243090 CDS NP_869113.1 32476119 1793090 complement(5314345..5314974) 1 NC_005027.1 hypothetical protein 5314974 1793090 RB9867 Rhodopirellula baltica SH 1 hypothetical protein NP_869113.1 5314345 R 243090 CDS NP_869114.1 32476120 1790269 complement(5314979..5315983) 1 NC_005027.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 5315983 ilvC 1790269 ilvC Rhodopirellula baltica SH 1 ketol-acid reductoisomerase NP_869114.1 5314979 R 243090 CDS NP_869115.1 32476121 1791592 complement(5316045..5316629) 1 NC_005027.1 PMID: 6308579 PMID: 1851954 best DB hits: BLAST: swissprot:O27492; ILVH_METTH PROBABLE ACETOLACTATE SYNTHASE SMALL; E=1e-27 pir:S74358; acetolactate synthase ilvN - Synechocystis sp. (strain; E=5e-27 gb:AAB89532.1; (AE000985) acetolactate synthase, small subunit; E=9e-27 COG: MTH1443; COG0440 Acetolactate synthase, small subunit; E=9e-29 PFAM: PF01842; ACT domain; E=1.1e-18; acetolactate synthase small subunit 5316629 ilvN 1791592 ilvN Rhodopirellula baltica SH 1 acetolactate synthase small subunit NP_869115.1 5316045 R 243090 CDS NP_869116.1 32476122 1795169 5316692..5316895 1 NC_005027.1 hypothetical protein 5316895 1795169 RB9872 Rhodopirellula baltica SH 1 hypothetical protein NP_869116.1 5316692 D 243090 CDS NP_869117.1 32476123 1795842 5316908..5317711 1 NC_005027.1 best DB hits: BLAST: swissprot:P35154; YPUG_BACSU HYPOTHETICAL 29.6 KD PROTEIN IN; E=4e-18 ddbj:BAB05279.1; (AP001512) BH1560~unknown conserved protein; E=3e-14 pir:D81075; conserved hypothetical protein NMB1504 [imported] -; E=3e-13 COG: BS_ypuG; COG1354 Uncharacterized ACR; E=4e-19 PFAM: PF02616; Uncharacterized ACR, COG1354; E=1.1e-14; hypothetical protein 5317711 ypuG 1795842 ypuG Rhodopirellula baltica SH 1 hypothetical protein NP_869117.1 5316908 D 243090 CDS NP_869118.1 32476124 1795018 5317708..5318550 1 NC_005027.1 best DB hits: BLAST: gb:AAG52354.1; AC011765_6 (AC011765) unknown protein; E=2e-36 gb:AAD55271.1; AC008263_2 (AC008263) ESTs gb AA067482 and gb; E=4e-34 gb:AAD25827.1; AC006951_6 (AC006951) hypothetical protein; E=1e-29 COG: TM0864; COG1234 Metal-dependent hydrolases of the beta-lactamase; E=8e-06 PFAM: PF02112; cAMP phosphodiesterases class-; E=0.25 PF00753; Metallo-beta-lactamase superfa; E=0.036; hypothetical protein 5318550 1795018 RB9875 Rhodopirellula baltica SH 1 hypothetical protein NP_869118.1 5317708 D 243090 CDS NP_869119.1 32476125 1791246 5318552..5319721 1 NC_005027.1 PMID: 8757728 best DB hits: BLAST: ddbj:BAB05062.1; (AP001511) coproporphyrinogen III oxidase; E=7e-49 pir:B69640; coproporphyrinogen oxidase (EC 1.3.3.3) III,; E=4e-47 swissprot:P54304; HEMN_BACSU PROBABLE OXYGEN-INDEPENDENT; E=5e-47 COG: BH1343; COG0635 Coproporphyrinogen III oxidase and related FeS; E=7e-50 PFAM: PF02473; Oxygen-independent Coproporphy; E=2.7e-17; coproporphyrinogen III oxidase 5319721 hemN 1791246 hemN Rhodopirellula baltica SH 1 coproporphyrinogen III oxidase NP_869119.1 5318552 D 243090 CDS NP_869120.1 32476126 1795061 5319678..5319887 1 NC_005027.1 hypothetical protein 5319887 1795061 RB9877 Rhodopirellula baltica SH 1 hypothetical protein NP_869120.1 5319678 D 243090 CDS NP_869121.1 32476127 1790493 5319838..5320185 1 NC_005027.1 hypothetical protein 5320185 1790493 RB9878 Rhodopirellula baltica SH 1 hypothetical protein NP_869121.1 5319838 D 243090 CDS NP_869122.1 32476128 1796043 complement(5320131..5320868) 1 NC_005027.1 best DB hits: BLAST: pir:C83489; probable transcriptional regulator PA1261 [imported] -; E=6e-26 pir:H83309; probable transcriptional regulator PA2696 [imported] -; E=8e-14 ddbj:BAB04708.1; (AP001510) transcriptional regulator (AraCXylS; E=1e-11 COG: PA1261; COG2207 AraC-type DNA-binding domain-containing proteins; E=5e-27 PFAM: PF00989; PAS domain; E=0.18 PF00165; Bacterial regulatory helix-turn-heli; E=7.6e-24; transcriptional regulator 5320868 1796043 RB9879 Rhodopirellula baltica SH 1 transcriptional regulator NP_869122.1 5320131 R 243090 CDS NP_869123.1 32476129 1791810 5320852..5322111 1 NC_005027.1 PMID: 3153462 best DB hits: BLAST: gb:AAF58870.1; (AE003831) CG12130 gene product [Drosophila; E=0.033 ddbj:BAA06104.1; (D29625) precursor peptide [Equus caballus]; E=0.041 pir:T25723; hypothetical protein F21F3.1 - Caenorhabditis elegans; E=0.14; peptidylglycine monooxygenase 5322111 pam 1791810 pam Rhodopirellula baltica SH 1 peptidylglycine monooxygenase NP_869123.1 5320852 D 243090 CDS NP_869124.1 32476130 1795119 5322182..5325406 1 NC_005027.1 best DB hits: BLAST: gb:AAF24999.1; (AF141320) endo-inulinase [Pseudomonas mucidolens]; E=0.45; endo-inulinase 5325406 1795119 RB9884 Rhodopirellula baltica SH 1 endo-inulinase NP_869124.1 5322182 D 243090 CDS NP_869125.1 32476131 1795045 5325468..5327039 1 NC_005027.1 sulfatase 5327039 1795045 RB9886 Rhodopirellula baltica SH 1 sulfatase NP_869125.1 5325468 D 243090 CDS NP_869126.1 32476132 1793256 5327180..5328352 1 NC_005027.1 best DB hits: BLAST: pir:S74947; hypothetical protein slr1591 - Synechocystis sp. (strain; E=1e-43 pir:F83079; NADH dehydrogenase PA4538 [imported] - Pseudomonas; E=9e-08 gb:AAK06224.1; AE006441_2 (AE006441) NADH oxidase [Lactococcus; E=1e-07 COG: slr1591; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; E=1e-44 PA4538; COG1252 NADH dehydrogenase, FAD-containing subunit; E=9e-09 Ta1129; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; E=6e-07 PFAM: PF02411; MerT mercuric transport prote; E=0.58 PF01266; D-amino acid oxidase; E=0.097 PF00070; Pyridine nucleotide-disulphid; E=4.6e-14; NADH dehydrogenase 5328352 yjlD 1793256 yjlD Rhodopirellula baltica SH 1 NADH dehydrogenase NP_869126.1 5327180 D 243090 CDS NP_869127.1 32476133 1795785 5328390..5329865 1 NC_005027.1 PMID: 2843510 best DB hits: BLAST: pir:F72119; cytochrome oxidase chain I - Chlamydophila pneumoniae; E=3e-89 pir:A81721; cytochrome D ubiquinol oxidase, chain I TC0281; E=7e-86 pir:F71567; probable cytochrome oxidase chain I - Chlamydia; E=2e-85 COG: CPn0102; COG1271 Cytochrome bd-type quinol oxidase, subunit 1; E=3e-90 PFAM: PF01654; Bacterial Cytochrome Ubiquinol Ox; E=1.3e-170; cytochrome oxidase chain I 5329865 cydA 1795785 cydA Rhodopirellula baltica SH 1 cytochrome oxidase chain I NP_869127.1 5328390 D 243090 CDS NP_869128.1 32476134 1794567 5329862..5330890 1 NC_005027.1 PMID: 2843510 best DB hits: BLAST: gb:AAG01153.1; AF284438_4 (AF284438) cytochrome d oxidase subunit; E=3e-51 pir:H70417; cytochrome oxidase d subunit II - Aquifex aeolicus; E=1e-49 pir:G72119; cytochrome D ubiquinol oxidase, chain II CP0671; E=2e-47 COG: aq_1358; COG1294 Cytochrome bd-type quinol oxidase, subunit 2; E=9e-51 PFAM: PF02322; Cytochrome oxidase subunit II; E=4.7e-139; cytochrome d oxidase subunit 5330890 cydB 1794567 cydB Rhodopirellula baltica SH 1 cytochrome d oxidase subunit NP_869128.1 5329862 D 243090 CDS NP_869129.1 32476135 1795518 complement(5330911..5333682) 1 NC_005027.1 signal peptide 5333682 1795518 RB9895 Rhodopirellula baltica SH 1 signal peptide NP_869129.1 5330911 R 243090 CDS NP_869130.1 32476136 1790741 complement(5333549..5333773) 1 NC_005027.1 hypothetical protein 5333773 1790741 RB9897 Rhodopirellula baltica SH 1 hypothetical protein NP_869130.1 5333549 R 243090 CDS NP_869131.1 32476137 1796973 5333967..5334593 1 NC_005027.1 PMID: 8626329 best DB hits: BLAST: embl:CAC11607.1; (AL445064) probable intracellular proteinase I; E=2e-33 pir:F72722; hypothetical protein APE0319 - Aeropyrum pernix (strain; E=4e-27 gb:AAB89965.1; (AE001016) intracellular protease (pfpI); E=3e-20 COG: Ta0465; COG0693 intracellular protease/amidase; E=2e-34 PFAM: PF01965; ThiJ/PfpI family; E=3.6e-26; intracellular proteinase I 5334593 1796973 RB9898 Rhodopirellula baltica SH 1 intracellular proteinase I NP_869131.1 5333967 D 243090 CDS NP_869132.1 32476138 1796734 complement(5334744..5335766) 1 NC_005027.1 signal peptide 5335766 1796734 RB9900 Rhodopirellula baltica SH 1 signal peptide NP_869132.1 5334744 R 243090 CDS NP_869133.1 32476139 1795124 complement(5335763..5336299) 1 NC_005027.1 chaperonine 5336299 1795124 RB9902 Rhodopirellula baltica SH 1 chaperonine NP_869133.1 5335763 R 243090 CDS NP_869134.1 32476140 1796280 complement(5336312..5337100) 1 NC_005027.1 hypothetical protein 5337100 1796280 RB9903 Rhodopirellula baltica SH 1 hypothetical protein NP_869134.1 5336312 R 243090 CDS NP_869135.1 32476141 1796463 complement(5337111..5337344) 1 NC_005027.1 hypothetical protein 5337344 1796463 RB9904 Rhodopirellula baltica SH 1 hypothetical protein NP_869135.1 5337111 R 243090 CDS NP_869136.1 32476142 1796365 5337287..5338162 1 NC_005027.1 best DB hits: BLAST: pir:S35005; probable transposase - Acetobacter xylinus insertion; E=5e-56 gb:AAD47597.1; AF144038_1 (AF144038) transposase; E=1e-55 pir:S77171; transposase sll1710 - Synechocystis sp. (strain PCC; E=4e-55 COG: sll1710; COG3293 Predicted transposase; E=3e-56 PFAM: PF01511; Transposase; E=9e-35 PF01675; Transposase; E=2.1e-31; transposase 5338162 1796365 RB9905 Rhodopirellula baltica SH 1 transposase NP_869136.1 5337287 D 243090 CDS NP_869137.1 32476143 1790102 5338185..5339486 1 NC_005027.1 best DB hits: BLAST: gb:AAD45539.1; U70376_1 (U70376) InsA [Streptomyces netropsis]; E=5e-33 gb:AAG60893.1; AF322013_12 (AF322013) ID460 [Bradyrhizobium; E=8e-33 ddbj:BAA19966.1; (D63923) transposase [Acetobacter pasteurianus]; E=1e-26; InsA (transposase) 5339486 1790102 RB9907 Rhodopirellula baltica SH 1 InsA (transposase) NP_869137.1 5338185 D 243090 CDS NP_869138.1 32476144 1793638 5339497..5339649 1 NC_005027.1 hypothetical protein 5339649 1793638 RB9908 Rhodopirellula baltica SH 1 hypothetical protein NP_869138.1 5339497 D 243090 CDS NP_869139.1 32476145 1791927 complement(5339539..5339913) 1 NC_005027.1 hypothetical protein 5339913 1791927 RB9909 Rhodopirellula baltica SH 1 hypothetical protein NP_869139.1 5339539 R 243090 CDS NP_869140.1 32476146 1796450 complement(5340153..5342036) 1 NC_005027.1 PMID: 3139632 PMID: 7664125 best DB hits: BLAST: gb:AAA90913.1; (U33060) endo-1,4-beta-xylanase [Thermotoga sp.]; E=2e-33 pir:B72423; endo-1,4-beta-xylanase B - Thermotoga maritima (strain; E=3e-33 swissprot:Q60041; XYNB_THENE ENDO-1,4-BETA-XYLANASE B PRECURSOR; E=2e-31 PFAM: PF00331; Glycosyl hydrolase 10; E=0.05; endo-1,4-beta-xylanase 5342036 1796450 RB9911 Rhodopirellula baltica SH 1 endo-1,4-beta-xylanase NP_869140.1 5340153 R 243090 CDS NP_869141.1 32476147 1794880 complement(5341978..5342994) 1 NC_005027.1 signal peptide 5342994 1794880 RB9913 Rhodopirellula baltica SH 1 signal peptide NP_869141.1 5341978 R 243090 CDS NP_869142.1 32476148 1795727 complement(5343249..5343782) 1 NC_005027.1 PMID: 3528756 best DB hits: BLAST: pir:C82333; ribosomal protein L9 VC0369 [imported] - Vibrio cholerae; E=2e-23 pir:B82543; 50S ribosomal protein L9 XF2559 [imported] - Xylella; E=9e-20 swissprot:P02418; RL9_ECOLI 50S RIBOSOMAL PROTEIN L9 -----; E=4e-19 COG: VC0369; COG0359 Ribosomal protein L9; E=2e-24 PFAM: PF01281; Ribosomal protein L9; E=1.1e-39; ribosomal protein L9 5343782 rplI 1795727 rplI Rhodopirellula baltica SH 1 ribosomal protein L9 NP_869142.1 5343249 R 243090 CDS NP_869143.1 32476149 1795538 complement(5343861..5344370) 1 NC_005027.1 PMID: 6270666 PMID: 6384214 best DB hits: BLAST: swissprot:O83101; SSB_TREPA SINGLE-STRAND BINDING PROTEIN (SSB); E=7e-23 embl:CAA76674.1; (Y17166) single strand DNA binding protein; E=1e-19 pir:B81310; single-strand DNA binding protein Cj1071 [imported] -; E=1e-19 COG: TP0062; COG0629 Single-stranded DNA-binding protein; E=7e-24 PFAM: PF00436; Single-strand binding protein family; E=1.7e-48; single-strand binding protein 5344370 ssb 1795538 ssb Rhodopirellula baltica SH 1 single-strand binding protein NP_869143.1 5343861 R 243090 CDS NP_869144.1 32476150 1795375 5344369..5344872 1 NC_005027.1 hypothetical protein 5344872 1795375 RB9918 Rhodopirellula baltica SH 1 hypothetical protein NP_869144.1 5344369 D 243090 CDS NP_869145.1 32476151 1796857 complement(5344405..5344827) 1 NC_005027.1 PMID: 3528756 best DB hits: BLAST: embl:CAA76675.1; (Y17166) ribosomal protein S6 [Campylobacter; E=3e-06 swissprot:Q9ZAH3; RS6_CAMJE 30S RIBOSOMAL PROTEIN S6 -----; E=4e-06 swissprot:P56013; RS6_HELPY 30S RIBOSOMAL PROTEIN S6 -----; E=8e-06 COG: Cj1070; COG0360 Ribosomal protein S6; E=4e-07 PFAM: PF01250; Ribosomal protein S6; E=1.3e-13; ribosomal protein S6 5344827 rpsF 1796857 rpsF Rhodopirellula baltica SH 1 ribosomal protein S6 NP_869145.1 5344405 R 243090 CDS NP_869146.1 32476152 1793404 complement(5344869..5345441) 1 NC_005027.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 5345441 pth 1793404 pth Rhodopirellula baltica SH 1 peptidyl-tRNA hydrolase NP_869146.1 5344869 R 243090 CDS NP_869147.1 32476153 1797218 complement(5345438..5346076) 1 NC_005027.1 best DB hits: BLAST: swissprot:P14194; CTC_BACSU GENERAL STRESS PROTEIN CTC -----; E=4e-18 pir:S05373; ctc protein - Bacillus subtilis (fragment) -----; E=1e-17 ddbj:BAB03786.1; (AP001507) 50S ribosomal protein L25 [Bacillus; E=1e-16 COG: BS_ctc; COG1825 Ribosomal protein L25 (general stress protein Ctc); E=4e-19 PFAM: PF01386; Ribosomal L25p family; E=6.1e-20; 50S ribosomal protein L25 5346076 rplY 1797218 rplY Rhodopirellula baltica SH 1 50S ribosomal protein L25 NP_869147.1 5345438 R 243090 CDS NP_869148.1 32476154 1796055 complement(5346254..5347174) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB10440.1; (AB009055) pyruvate kinase [Arabidopsis; E=0.25; pyruvate kinase-hypothetical secreted or membrane associated protein 5347174 1796055 RB9926 Rhodopirellula baltica SH 1 pyruvate kinase-hypothetical secreted or membrane associated protein NP_869148.1 5346254 R 243090 CDS NP_869149.1 32476155 1796267 complement(5347256..5348656) 1 NC_005027.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 5348656 clpX 1796267 clpX Rhodopirellula baltica SH 1 ATP-dependent protease ATP-binding subunit ClpX NP_869149.1 5347256 R 243090 CDS NP_869150.1 32476156 1797211 complement(5348975..5349331) 1 NC_005027.1 best DB hits: PFAM: PF01537; Herpesvirus glycoprotein D; E=0.22; signal peptide 5349331 1797211 RB9930 Rhodopirellula baltica SH 1 signal peptide NP_869150.1 5348975 R 243090 CDS NP_869151.1 32476157 1791728 complement(5349475..5350425) 1 NC_005027.1 best DB hits: BLAST: pir:T34932; hypothetical protein SC3F9.10 SC3F9.10 - Streptomyces; E=5e-06 pir:T36189; probable isomerase - Streptomyces coelicolor -----; E=0.001; hypothetical protein 5350425 1791728 RB9932 Rhodopirellula baltica SH 1 hypothetical protein NP_869151.1 5349475 R 243090 CDS NP_869152.1 32476158 1797150 5350464..5350640 1 NC_005027.1 hypothetical protein 5350640 1797150 RB9936 Rhodopirellula baltica SH 1 hypothetical protein NP_869152.1 5350464 D 243090 CDS NP_869153.1 32476159 1795170 5350651..5352162 1 NC_005027.1 best DB hits: BLAST: pir:H82133; conserved hypothetical protein VC1966 [imported] -; E=1e-23 pir:F81867; probable integral membrane protein NMA1715 [imported] -; E=4e-22 pir:B81074; transporter, probable NMB1515 [imported] - Neisseria; E=1e-21 COG: VC1966_1; COG0477 Permeases of the major facilitator superfamily; E=1e-22; transporter 5352162 1795170 RB9937 Rhodopirellula baltica SH 1 transporter NP_869153.1 5350651 D 243090 CDS NP_869154.1 32476160 1796644 complement(5352096..5352302) 1 NC_005027.1 hypothetical protein 5352302 1796644 RB9941 Rhodopirellula baltica SH 1 hypothetical protein NP_869154.1 5352096 R 243090 CDS NP_869155.1 32476161 1791127 complement(5352324..5353916) 1 NC_005027.1 best DB hits: BLAST: swissprot:O05979; Y789_RICPR HYPOTHETICAL PROTEIN RP789 -----; E=9e-51 embl:CAA72463.1; (Y11779) hypothetical protein [Rickettsia; E=6e-37 gb:AAK02458.1; (AE006073) unknown [Pasteurella multocida]; E=5e-35 COG: RP789_1; COG0500 SAM-dependent methyltransferases; E=8e-47; SAM-dependent methyltransferase 5353916 1791127 RB9942 Rhodopirellula baltica SH 1 SAM-dependent methyltransferase NP_869155.1 5352324 R 243090 CDS NP_869156.1 32476162 1791583 5353964..5355271 1 NC_005027.1 PMID: 8027026 best DB hits: BLAST: gb:AAD52151.1; AF132298_1 (AF132298) broadly selective; E=3e-54 gb:AAK03376.1; (AE006168) unknown [Pasteurella multocida]; E=6e-54 swissprot:Q62674; CNT1_RAT SODIUMNUCLEOSIDE COTRANSPORTER 1; E=2e-53 COG: BH1446; COG1972 Nucleoside permease; E=2e-53 PFAM: PF01773; Na+ dependent nucleoside tran; E=1.1e-142; broadly selective sodium/nucleoside transporter hfCNT 5355271 cnt1 1791583 cnt1 Rhodopirellula baltica SH 1 broadly selective sodium/nucleoside transporter hfCNT NP_869156.1 5353964 D 243090 CDS NP_869157.1 32476163 1790830 5355360..5356313 1 NC_005027.1 signal peptide 5356313 1790830 RB9945 Rhodopirellula baltica SH 1 signal peptide NP_869157.1 5355360 D 243090 CDS NP_869158.1 32476164 1794279 complement(5356736..5357236) 1 NC_005027.1 hypothetical protein 5357236 1794279 RB9948 Rhodopirellula baltica SH 1 hypothetical protein NP_869158.1 5356736 R 243090 CDS NP_869159.1 32476165 1794283 complement(5357353..5359563) 1 NC_005027.1 best DB hits: BLAST: embl:CAB66476.1; (AL136541) hypothetical protein [Homo sapiens]; E=0.31 embl:CAA62913.1; (X91803) sodium-calcium exchanger; E=0.43 PFAM: PF00404; Dockerin type I repeat; E=0.19; hypothetical protein 5359563 1794283 RB9950 Rhodopirellula baltica SH 1 hypothetical protein NP_869159.1 5357353 R 243090 CDS NP_869160.1 32476166 1794676 complement(5359676..5360476) 1 NC_005027.1 PMID: 7928962 best DB hits: BLAST: pir:F82311; survival protein SurE VC0531 [imported] - Vibrio; E=2e-37 gb:AAD51394.1; AF117715_3 (AF117715) survival protein homolog; E=8e-35 swissprot:O67004; SURE_AQUAE STATIONARY-PHASE SURVIVAL PROTEIN; E=5e-34 COG: VC0531; COG0496 Survival protein, predicted acid phosphatase; E=2e-38 PFAM: PF01975; Survival protein SurE; E=3.1e-64; survival protein SurE 5360476 surE 1794676 surE Rhodopirellula baltica SH 1 survival protein SurE NP_869160.1 5359676 R 243090 CDS NP_869161.1 32476167 1794100 complement(5360489..5362111) 1 NC_005027.1 best DB hits: BLAST: pir:D82536; conserved hypothetical protein XF2619 [imported] -; E=1e-140 pir:T49917; hypothetical protein T24H18.200 - Arabidopsis thaliana; E=1e-100 swissprot:P77649; YDIU_ECOLI HYPOTHETICAL 54.4 KD PROTEIN IN; E=2e-82 COG: XF2619; COG0397 Uncharacterized ACR; E=1e-141 PFAM: PF02696; Uncharacterized ACR, YdiU/UPF0061; E=5e-63; hypothetical protein 5362111 1794100 RB9953 Rhodopirellula baltica SH 1 hypothetical protein NP_869161.1 5360489 R 243090 CDS NP_869162.1 32476168 1796452 complement(5362247..5363605) 1 NC_005027.1 best DB hits: PFAM: PF01676; Metalloenzyme superfamily; E=0.78; hypothetical protein 5363605 1796452 RB9955 Rhodopirellula baltica SH 1 hypothetical protein NP_869162.1 5362247 R 243090 CDS NP_869163.1 32476169 1789948 complement(5363607..5366096) 1 NC_005027.1 signal peptide 5366096 1789948 RB9957 Rhodopirellula baltica SH 1 signal peptide NP_869163.1 5363607 R 243090 CDS NP_869164.1 32476170 1796198 complement(5366220..5366417) 1 NC_005027.1 hypothetical protein 5366417 1796198 RB9959 Rhodopirellula baltica SH 1 hypothetical protein NP_869164.1 5366220 R 243090 CDS NP_869165.1 32476171 1790784 5366418..5367416 1 NC_005027.1 signal peptide 5367416 1790784 RB9960 Rhodopirellula baltica SH 1 signal peptide NP_869165.1 5366418 D 243090 CDS NP_869166.1 32476172 1795015 complement(5367674..5368651) 1 NC_005027.1 hypothetical protein 5368651 1795015 RB9964 Rhodopirellula baltica SH 1 hypothetical protein NP_869166.1 5367674 R 243090 CDS NP_869167.1 32476173 1794642 complement(5368655..5370040) 1 NC_005027.1 best DB hits: BLAST: pir:C72330; astBchuR-related protein - Thermotoga maritima (strain; E=1e-30 gb:AAB89245.1; (AE000964) heme biosynthesis protein (nirJ-2); E=2e-14 pir:H72545; probable coenzyme PQQ synthesis protein APE1652 -; E=4e-10 COG: TM0824; COG0535 Predicted Fe-S oxidoreductases; E=1e-31 AF2006; COG2896 Molybdenum cofactor biosynthesis enzyme; E=0.002 MJ0907; COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); E=0.004 PFAM: PF01444; moaA / nifB / pqqE family; E=0.00043; hypothetical protein 5370040 1794642 RB9966 Rhodopirellula baltica SH 1 hypothetical protein NP_869167.1 5368655 R 243090 CDS NP_869168.1 32476174 1792404 5370020..5370340 1 NC_005027.1 hypothetical protein 5370340 1792404 RB9969 Rhodopirellula baltica SH 1 hypothetical protein NP_869168.1 5370020 D 243090 CDS NP_869169.1 32476175 1793676 5370350..5371720 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB05884.1; (AP001514) BH2165~unknown conserved protein; E=3e-11 ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=1e-09 gb:AAC23913.1; (AF039207) NADH-dependent dehydrogenase homolog; E=2e-09 COG: BH2165; COG0673 Predicted dehydrogenases and related proteins; E=3e-12 PFAM: PF01408; Oxidoreductase, NAD-bin; E=3.7e-23; NADH-dependent dyhydrogenase 5371720 1793676 RB9971 Rhodopirellula baltica SH 1 NADH-dependent dyhydrogenase NP_869169.1 5370350 D 243090 CDS NP_869170.1 32476176 1791799 complement(5371844..5373487) 1 NC_005027.1 PMID: 11259647; hypothetical protein 5373487 1791799 RB9973 Rhodopirellula baltica SH 1 hypothetical protein NP_869170.1 5371844 R 243090 CDS NP_869171.1 32476177 1794217 5373768..5375321 1 NC_005027.1 hypothetical protein 5375321 1794217 RB9977 Rhodopirellula baltica SH 1 hypothetical protein NP_869171.1 5373768 D 243090 CDS NP_869172.1 32476178 1792317 5375015..5377234 1 NC_005027.1 PMID: 10517319 best DB hits: BLAST: gb:AAF35250.1; AF227632_1 (AF227632) mismatch binding protein Mus3; E 4e-12 pir:T41262; mutS family DNA mismatch repair protein - fission yeast; E 3e-11 gb:AAB57798.1; (AF001535) AGAA.3 [Arabidopsis thaliana]; E=5e-11 COG: VC0535; COG0249 MutS-like ATPases involved in mismatch repair,; E=5e-12 BU429; COG0249 MutS-like ATPases involved in mismatch repair, family; E=6e-12 XF1716; COG0249 MutS-like ATPases involved in mismatch repair,; E=1e-10 PFAM: PF00488; DNA mismatch repair proteins, mutS f; E=0.0026; mismatch binding protein 5377234 1792317 RB9979 Rhodopirellula baltica SH 1 mismatch binding protein NP_869172.1 5375015 D 243090 CDS NP_869173.1 32476179 1796406 complement(5377256..5377441) 1 NC_005027.1 hypothetical protein 5377441 1796406 RB9981 Rhodopirellula baltica SH 1 hypothetical protein NP_869173.1 5377256 R 243090 CDS NP_869174.1 32476180 1790355 5377468..5378649 1 NC_005027.1 best DB hits: BLAST: embl:CAC24034.1; (AL512980) ORF-c34_017 [Sulfolobus solfataricus]; E=1e-11 pir:H69216; 3-chlorobenzoate-3,4-dioxygenase dyhydrogenase related; E=3e-10 pir:T36464; probable oxidoreductase - Streptomyces coelicolor; E=2e-09 COG: MTH875; COG0673 Predicted dehydrogenases and related proteins; E=3e-11 PFAM: PF01408; Oxidoreductase, NAD-bin; E=1.1e-09 PF02894; Oxidoreductase, C-termi; E=0.0018; 3-chlorobenzoate-3,4-dioxygenase dyhydrogenase related protein 5378649 1790355 RB9982 Rhodopirellula baltica SH 1 3-chlorobenzoate-3,4-dioxygenase dyhydrogenase related protein NP_869174.1 5377468 D 243090 CDS NP_869175.1 32476181 1790036 complement(5378777..5379757) 1 NC_005027.1 PMID: 8293960 best DB hits: BLAST: pir:B75598; probable mannose-6-phosphate isomerase - Deinococcus; E=7e-43 pir:H69848; mannose-6-phosphate isomerase homolog yjdE - Bacillus; E=5e-39 ddbj:BAA75351.1; (AB011838) mannnose-6 phospate isomelase; E=8e-39 COG: DRA0048; COG1482 Phosphomannose isomerase; E=7e-44 PFAM: PF01238; Phosphomannose isomerase type I; E=0.0026; mannose-6-phosphate isomerase 5379757 pmi 1790036 pmi Rhodopirellula baltica SH 1 mannose-6-phosphate isomerase NP_869175.1 5378777 R 243090 CDS NP_869176.1 32476182 1795804 complement(5379828..5380382) 1 NC_005027.1 hypothetical protein 5380382 1795804 RB9985 Rhodopirellula baltica SH 1 hypothetical protein NP_869176.1 5379828 R 243090 CDS NP_869177.1 32476183 1796375 complement(5380379..5380717) 1 NC_005027.1 hypothetical protein 5380717 1796375 RB9986 Rhodopirellula baltica SH 1 hypothetical protein NP_869177.1 5380379 R 243090 CDS NP_869178.1 32476184 1794740 complement(5380734..5381816) 1 NC_005027.1 hypothetical protein 5381816 1794740 RB9989 Rhodopirellula baltica SH 1 hypothetical protein NP_869178.1 5380734 R 243090 CDS NP_869179.1 32476185 1790243 5381822..5381983 1 NC_005027.1 hypothetical protein 5381983 1790243 RB9990 Rhodopirellula baltica SH 1 hypothetical protein NP_869179.1 5381822 D 243090 CDS NP_869180.1 32476186 1794871 complement(5382085..5383545) 1 NC_005027.1 best DB hits: BLAST: pir:C75316; conserved hypothetical protein - Deinococcus radiodurans; E=1e-63 gb:AAG19052.1; (AE005004) Vng0525c [Halobacterium sp. NRC-1]; E=1e-47 pir:B72260; conserved hypothetical protein - Thermotoga maritima; E=2e-46 COG: DR2101; COG0719 Predicted membrane components of an uncharacterized; E=1e-64 VNG0525C; COG0719 Predicted membrane components of an; E=1e-48 TM1369; COG0719 Predicted membrane components of an uncharacterized; E=2e-47 PFAM: PF02291; Transcription initiation factor IID,; E=0.53 PF01458; Uncharacterized protein family (UPF0; E=2.1e-67; iron-regulated ABC transporter 5383545 1794871 RB9992 Rhodopirellula baltica SH 1 iron-regulated ABC transporter NP_869180.1 5382085 R 243090 CDS NP_869181.1 32476187 1791821 complement(5383639..5385045) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB07186.1; (AP001518) BH3467~unknown conserved protein; E=1e-174 pir:T35997; conserved hypothetical protein SCC22.07c - Streptomyces; E=1e-174 pir:D70019; conserved hypothetical protein yurU - Bacillus subtilis; E=1e-171 COG: BH3467; COG0719 Predicted membrane components of an uncharacterized; E=1e-175 VNG0525C; COG0719 Predicted membrane components of an; E=1e-135 TP0612; COG0719 Predicted membrane components of an uncharacterized; E=1e-132 PFAM: PF01458; Uncharacterized protein family (UPF0; E=8.2e-125; iron-regulated ABC transporter 5385045 1791821 RB9995 Rhodopirellula baltica SH 1 iron-regulated ABC transporter NP_869181.1 5383639 R 243090 CDS NP_869182.1 32476188 1797185 complement(5385104..5385937) 1 NC_005027.1 best DB hits: BLAST: pir:B70872; probable ABC-type transporter ATP-binding protein -; E=3e-68 swissprot:P80866; V296_BACSU VEGETATIVE PROTEIN 296 (VEG296); E=4e-66 ddbj:BAB07190.1; (AP001518) ABC transporter (ATP-binding protein); E=1e-64 COG: Rv1463; COG0396 Iron-regulated ABC transporter ATPase subunit SufC; E=3e-69 PFAM: PF00005; ABC transporter; E=9.6e-30; ABC transporter ATP-binding protein 5385937 1797185 RB9998 Rhodopirellula baltica SH 1 ABC transporter ATP-binding protein NP_869182.1 5385104 R 243090 CDS NP_869183.1 32476189 1793381 complement(5385983..5386828) 1 NC_005027.1 best DB hits: BLAST: pir:D82048; conserved hypothetical protein VC2666 [imported] -; E=7e-06 ddbj:BAB07148.1; (AP001518) BH3429~unknown conserved protein in; E=0.001 pir:S72759; hypothetical protein B1496_C2_188 - Mycobacterium leprae; E=0.004 COG: VC2666; COG2345 Predicted transcriptional regulator; E=7e-07 PFAM: PF01037; AsnC family; E=0.23; transcriptional regulator 5386828 1793381 RB9999 Rhodopirellula baltica SH 1 transcriptional regulator NP_869183.1 5385983 R 243090 CDS NP_869184.1 32476190 1794151 5387011..5388126 1 NC_005027.1 PMID: 8436115 PMID: 2803257 best DB hits: BLAST: gb:AAG18991.1; (AE004999) glucose dehydrogenase; Gcd; E=2e-27 pir:T44937; glucose 1-dehydrogenase (EC 1.1.1.47) [imported] -; E=1e-25 pir:S29788; glucose 1-dehydrogenase (EC 1.1.1.47) - Thermoplasma; E=3e-13 COG: VNG0446G; COG1063 Threonine dehydrogenase and related Zn-dependent; E=2e-28 YDL168w; COG1062 Zn-dependent alcohol dehydrogenases, class III; E=0.003 XF1727; COG1063 Threonine dehydrogenase and related Zn-dependent; E=0.005 PFAM: PF00107; Zinc-binding dehydrogenases; E=3.1e-22; glucose dehydrogenase Gcd 5388126 gcd 1794151 gcd Rhodopirellula baltica SH 1 glucose dehydrogenase Gcd NP_869184.1 5387011 D 243090 CDS NP_869185.1 32476191 1796418 5388110..5389189 1 NC_005027.1 best DB hits: BLAST: gb:AAG19748.1; (AE005060) phosphoglycerate dehydrogenase; SerA2; E=4e-30 swissprot:P45637; YPRA_CORGL HYPOTHETICAL 33.0 KD PROTEIN IN; E=2e-28 pir:T35826; probable dehydrogenase - Streptomyces coelicolor -----; E=5e-26 COG: VNG1437G; COG0111 Phosphoglycerate dehydrogenase and related; E=3e-31 PA2263; COG1052 Lactate dehydrogenase and related dehydrogenases; E=2e-25 MTH970; COG0111 Phosphoglycerate dehydrogenase and related; E=3e-25 PFAM: PF02826; D-isomer specific 2-hydroxyacid; E=3.8e-62; phosphoglycerate dehydrogenase SerA2- NAD-dependent 2-hydroxyacid dehydrogenase 5389189 serA 1796418 serA Rhodopirellula baltica SH 1 phosphoglycerate dehydrogenase SerA2- NAD-dependent 2-hydroxyacid dehydrogenase NP_869185.1 5388110 D 243090 CDS NP_869186.1 32476192 1794213 5389186..5389419 1 NC_005027.1 hypothetical protein 5389419 1794213 RB10005 Rhodopirellula baltica SH 1 hypothetical protein NP_869186.1 5389186 D 243090 CDS NP_869187.1 32476193 1796073 complement(5389524..5390195) 1 NC_005027.1 PMID: 1356963 PMID: 7860596 PMID: 9693059 PMID: 10903950 PMID: 1453690 best DB hits: BLAST: ddbj:BAA97018.1; (AB024032) contains similarity to pyridoxamine; E=3e-50 embl:CAB95898.1; (AL359988) pyridoxamine oxidase; E=5e-50 pir:F83513; pyridoxine 5'-phosphate oxidase PA1049 [imported] -; E=1e-49 COG: PA1049; COG0259 Pyridoxamine phosphate oxidase; E=1e-50 PFAM: PF01243; Pyridoxamine 5'-phosphate oxi; E=4.2e-107; pyridoxamine oxidase 5390195 pdxH 1796073 pdxH Rhodopirellula baltica SH 1 pyridoxamine oxidase NP_869187.1 5389524 R 243090 CDS NP_869188.1 32476194 1792406 5390130..5391071 1 NC_005027.1 best DB hits: BLAST: gb:AAF97283.1; AC010164_5 (AC010164) Unknown protein [Arabidopsis; E=0.087 pir:B82584; transcriptional regulator XF2228 [imported] - Xylella; E=0.32 pir:T10016; hypothetical protein - Mycobacterium leprae -----; E=0.64; hypothetical protein 5391071 1792406 RB10007 Rhodopirellula baltica SH 1 hypothetical protein NP_869188.1 5390130 D 243090 CDS NP_869189.1 32476195 1796396 5391076..5391459 1 NC_005027.1 PMID: 8631696 best DB hits: BLAST: swissprot:P77605; CSPI_ECOLI COLD SHOCK-LIKE PROTEIN CSPI; E=0.27 embl:CAA72682.1; (Y11932) cspB [Salmonella typhimurium]; E=0.31 swissprot:Q47130; CSPG_ECOLI COLD SHOCK-LIKE PROTEIN CSPG; E=0.36 PFAM: PF00313; 'Cold-shock' DNA-binding domain; E=6.7e-05; cold shock-like protein cspI 5391459 cspG 1796396 cspG Rhodopirellula baltica SH 1 cold shock-like protein cspI NP_869189.1 5391076 D 243090 CDS NP_869190.1 32476196 1796339 complement(5391460..5393982) 1 NC_005027.1 signal peptide 5393982 1796339 RB10010 Rhodopirellula baltica SH 1 signal peptide NP_869190.1 5391460 R 243090 CDS NP_869191.1 32476197 1794326 complement(5393973..5395577) 1 NC_005027.1 best DB hits: PFAM: PF01676; Metalloenzyme superfamily; E=0.19; hypothetical protein 5395577 1794326 RB10014 Rhodopirellula baltica SH 1 hypothetical protein NP_869191.1 5393973 R 243090 CDS NP_869192.1 32476198 1796212 5395605..5396468 1 NC_005027.1 hypothetical protein 5396468 1796212 RB10018 Rhodopirellula baltica SH 1 hypothetical protein NP_869192.1 5395605 D 243090 CDS NP_869193.1 32476199 1792044 5396392..5396559 1 NC_005027.1 hypothetical protein 5396559 1792044 RB10019 Rhodopirellula baltica SH 1 hypothetical protein NP_869193.1 5396392 D 243090 CDS NP_869194.1 32476200 1792554 complement(5396594..5396788) 1 NC_005027.1 hypothetical protein 5396788 1792554 RB10020 Rhodopirellula baltica SH 1 hypothetical protein NP_869194.1 5396594 R 243090 CDS NP_869195.1 32476201 1791582 5396777..5396923 1 NC_005027.1 hypothetical protein 5396923 1791582 RB10021 Rhodopirellula baltica SH 1 hypothetical protein NP_869195.1 5396777 D 243090 CDS NP_869196.1 32476202 1791951 5396916..5397413 1 NC_005027.1 hypothetical protein 5397413 1791951 RB10022 Rhodopirellula baltica SH 1 hypothetical protein NP_869196.1 5396916 D 243090 CDS NP_869197.1 32476203 1796334 5397477..5398001 1 NC_005027.1 hypothetical protein 5398001 1796334 RB10023 Rhodopirellula baltica SH 1 hypothetical protein NP_869197.1 5397477 D 243090 CDS NP_869198.1 32476204 1792494 complement(5397998..5398270) 1 NC_005027.1 hypothetical protein 5398270 1792494 RB10024 Rhodopirellula baltica SH 1 hypothetical protein NP_869198.1 5397998 R 243090 CDS NP_869199.1 32476205 1797202 complement(5398325..5399254) 1 NC_005027.1 best DB hits: BLAST: pir:D83031; conserved hypothetical protein PA4926 [imported] -; E=4e-49 swissprot:Q50652; YP69_MYCTU HYPOTHETICAL 34.4 KDA PROTEIN RV2569C; E=2e-32 embl:CAA19100.1; (AL023591) hypothetical protein MLCB1259.25; E=4e-32 COG: PA4926; COG1305 transglutaminases, cysteine; E=4e-50 PFAM: PF01841; Transglutaminase-like superfam; E=1.6e-20; protease 5399254 1797202 RB10025 Rhodopirellula baltica SH 1 protease NP_869199.1 5398325 R 243090 CDS NP_869200.1 32476206 1792174 complement(5399251..5401902) 1 NC_005027.1 best DB hits: BLAST: pir:E83031; conserved hypothetical protein PA4927 [imported] -; E=1e-107 embl:CAA17945.1; (AL022118) hypothetical protein MLCB1913.13; E=1e-94 swissprot:Q50654; YP67_MYCTU HYPOTHETICAL 95.4 KDA PROTEIN RV2567; E=4e-88 COG: PA4927_1; COG2308 Uncharacterized BCR; E=4e-78 PA4927_2; COG2307 Uncharacterized BCR; E=4e-23; hypothetical protein 5401902 1792174 RB10026 Rhodopirellula baltica SH 1 hypothetical protein NP_869200.1 5399251 R 243090 CDS NP_869201.1 32476207 1790829 complement(5402078..5405425) 1 NC_005027.1 best DB hits: BLAST: pir:B70729; hypothetical protein Rv2566 - Mycobacterium tuberculosis; E=0.0 gb:AAD10833.1; (U49838) 72.2 KDa protein [Mycobacterium leprae]; E=1e-174 embl:CAA17944.1; (AL022118) hypothetical protein MLCB1913.12; E=1e-110 COG: Rv2566_1; COG1305 transglutaminases, cysteine; E=6e-81 PFAM: PF01841; Transglutaminase-like superfam; E=2.7e-17; protease 5405425 1790829 RB10027 Rhodopirellula baltica SH 1 protease NP_869201.1 5402078 R 243090 CDS NP_869202.1 32476208 1796186 complement(5405422..5406468) 1 NC_005027.1 best DB hits: BLAST: pir:S74601; hypothetical protein sll1039 - Synechocystis sp. (strain; E=2e-67 gb:AAC08422.1; (AF054525) hypothetical protein [Synechococcus sp.; E=1e-61 pir:B75323; conserved hypothetical protein - Deinococcus radiodurans; E=1e-35 COG: sll1039; COG2307 Uncharacterized BCR; E=2e-68; hypothetical protein 5406468 1796186 RB10028 Rhodopirellula baltica SH 1 hypothetical protein NP_869202.1 5405422 R 243090 CDS NP_869203.1 32476209 1790823 complement(5406484..5408100) 1 NC_005027.1 best DB hits: BLAST: swissprot:Q55587; Y335_SYNY3 HYPOTHETICAL 53.7 KDA PROTEIN SLL0335; E=1e-169 gb:AAC08421.1; (AF054525) hypothetical protein [Synechococcus sp.; E=1e-160 pir:C83429; conserved hypothetical protein PA1730 [imported] -; E=1e-135 COG: sll0335; COG2308 Uncharacterized BCR; E=1e-170; hypothetical protein 5408100 1790823 RB10030 Rhodopirellula baltica SH 1 hypothetical protein NP_869203.1 5406484 R 243090 CDS NP_869204.1 32476210 1792926 complement(5408110..5408328) 1 NC_005027.1 signal peptide 5408328 1792926 RB10032 Rhodopirellula baltica SH 1 signal peptide NP_869204.1 5408110 R 243090 CDS NP_869205.1 32476211 1791149 complement(5408291..5409271) 1 NC_005027.1 hypothetical protein 5409271 1791149 RB10033 Rhodopirellula baltica SH 1 hypothetical protein NP_869205.1 5408291 R 243090 CDS NP_869206.1 32476212 1792841 5409226..5410980 1 NC_005027.1 best DB hits: BLAST: gb:AAG31169.1; (AF314961) unknown [Salmonella typhimurium]; E=0.23 pir:C82804; conserved hypothetical protein XF0464 [imported] -; E=0.79 PFAM: PF01011; PQQ enzyme repeat; E=0.016; membrane bound PQQ-employing oxidoreductase 5410980 1792841 RB10035 Rhodopirellula baltica SH 1 membrane bound PQQ-employing oxidoreductase NP_869206.1 5409226 D 243090 CDS NP_869207.1 32476213 1790024 5410896..5411729 1 NC_005027.1 best DB hits: BLAST: embl:CAA77139.1; (Y18353) hypothetical protein [Thermus; E=2e-29 swissprot:P42981; YPJG_BACSU HYPOTHETICAL 24.8 KD PROTEIN IN; E=1e-24 ddbj:BAB05401.1; (AP001512) BH1682~unknown conserved protein; E=3e-23 COG: DR2363a; COG2120 Uncharacterized proteins, LmbE homologs; E=9e-32 PFAM: PF02585; Uncharacterized LmbE-like protein, C; E=4.6e-12; hypothetical protein 5411729 1790024 RB10036 Rhodopirellula baltica SH 1 hypothetical protein NP_869207.1 5410896 D 243090 CDS NP_869208.1 32476214 1790205 5411815..5413245 1 NC_005027.1 hypothetical protein 5413245 1790205 RB10038 Rhodopirellula baltica SH 1 hypothetical protein NP_869208.1 5411815 D 243090 CDS NP_869209.1 32476215 1791367 complement(5413242..5414639) 1 NC_005027.1 best DB hits: BLAST: gb:AAF31458.1; (AF223393) HRNT1 [Homo sapiens]; E=0.31 pir:B70374; conserved hypothetical protein aq_854 - Aquifex aeolicus; E=0.47 pir:A72220; conserved hypothetical protein - Thermotoga maritima; E=0.11 COG: PA5257; COG3071 Uncharacterized enzyme of heme biosynthesis; E=0.007 PFAM: PF00515; TPR Domain; E=2.9e-05; hypothetical protein 5414639 1791367 RB10039 Rhodopirellula baltica SH 1 hypothetical protein NP_869209.1 5413242 R 243090 CDS NP_869210.1 32476216 1796507 complement(5414632..5415855) 1 NC_005027.1 best DB hits: BLAST: gb:AAD05531.1; (AF083240) c-type cytochrome precursor [Shewanella; E=1e-04 gb:AAD05534.1; (AF083240) deca-heme c-type cytochrome [Shewanella; E=0.001; c-type cytochrome precursor 5415855 mtrA 1796507 mtrA Rhodopirellula baltica SH 1 c-type cytochrome precursor NP_869210.1 5414632 R 243090 CDS NP_869211.1 32476217 1791930 5415822..5416031 1 NC_005027.1 signal peptide 5416031 1791930 RB10042 Rhodopirellula baltica SH 1 signal peptide NP_869211.1 5415822 D 243090 CDS NP_869212.1 32476218 1795088 complement(5415836..5416018) 1 NC_005027.1 signal peptide 5416018 1795088 RB10043 Rhodopirellula baltica SH 1 signal peptide NP_869212.1 5415836 R 243090 CDS NP_869213.1 32476219 1795815 5416038..5416154 1 NC_005027.1 hypothetical protein 5416154 1795815 RB10044 Rhodopirellula baltica SH 1 hypothetical protein NP_869213.1 5416038 D 243090 CDS NP_869214.1 32476220 1795749 complement(5416167..5417477) 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein 5417477 1795749 RB10045 Rhodopirellula baltica SH 1 hypothetical protein NP_869214.1 5416167 R 243090 CDS NP_869215.1 32476221 1796020 complement(5417577..5417801) 1 NC_005027.1 hypothetical protein 5417801 1796020 RB10046 Rhodopirellula baltica SH 1 hypothetical protein NP_869215.1 5417577 R 243090 CDS NP_869216.1 32476222 1794410 5417619..5417843 1 NC_005027.1 hypothetical protein 5417843 1794410 RB10047 Rhodopirellula baltica SH 1 hypothetical protein NP_869216.1 5417619 D 243090 CDS NP_869217.1 32476223 1793803 complement(5417850..5419478) 1 NC_005027.1 PMID: 97078679 best DB hits: BLAST: embl:CAA67214.1; (X98625) sialic acid-specific 9-O-acetylesterase; E=1e-32 gb:AAB07813.1; (U40408) sialic-acid O-acetylesterase [Mus; E=2e-32 gb:AAD55976.1; (AF156856) cytosolic sialic acid; E=2e-29; sialic acid-specific 9-O-acetylesterase 5419478 1793803 RB10048 Rhodopirellula baltica SH 1 sialic acid-specific 9-O-acetylesterase NP_869217.1 5417850 R 243090 CDS NP_869218.1 32476224 1790446 5419507..5420160 1 NC_005027.1 PMID: 8052622 best DB hits: BLAST: gb:AAF18265.1; U22895_1 (U22895) alternative sigma factor AlgU; E=2e-04 gb:AAF01335.1; AF190580_1 (AF190580) alternate sigma factor AlgT; E=8e-04 gb:AAC98488.1; (AF049107) ECF sigma factor RpoE1; E=0.001 COG: PA0762; COG1595 DNA-directed RNA polymerase specialized sigma; E=3e-04 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=3.1e-05 PF00140; Sigma-70 factor; E=0.6; alternative sigma factor AlgU 5420160 1790446 RB10049 Rhodopirellula baltica SH 1 alternative sigma factor AlgU NP_869218.1 5419507 D 243090 CDS NP_869219.1 32476225 1795993 5420157..5423789 1 NC_005027.1 hypothetical protein 5423789 1795993 RB10051 Rhodopirellula baltica SH 1 hypothetical protein NP_869219.1 5420157 D 243090 CDS NP_869220.1 32476226 1796454 5423854..5425344 1 NC_005027.1 hypothetical protein 5425344 1796454 RB10053 Rhodopirellula baltica SH 1 hypothetical protein NP_869220.1 5423854 D 243090 CDS NP_869221.1 32476227 1795818 complement(5425334..5426716) 1 NC_005027.1 best DB hits: BLAST: gb:AAC46093.1; (U81973) Cap5J [Staphylococcus aureus]; E=0.32; Cap5J protein- transmembraneprotein 5426716 1795818 RB10055 Rhodopirellula baltica SH 1 Cap5J protein- transmembraneprotein NP_869221.1 5425334 R 243090 CDS NP_869222.1 32476228 1793453 5426810..5427139 1 NC_005027.1 best DB hits: BLAST: pir:A70799; probable transcriptional regulator Rv3744 -; E=4e-07 pir:A75601; transcription repressor SmtB - Deinococcus radiodurans; E=8e-07 swissprot:P37374; CADF_STAAU CADMIUM EFFLUX SYSTEM ACCESSORY; E=1e-06 COG: Rv3744; COG0640 Predicted transcriptional regulators; E=5e-08 PFAM: PF01022; Bacterial regulatory protein, arsR f; E=3.5e-19; transcriptional regulator 5427139 1793453 RB10060 Rhodopirellula baltica SH 1 transcriptional regulator NP_869222.1 5426810 D 243090 CDS NP_869223.1 32476229 1794214 5427236..5428342 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB04085.1; (AP001508) BH0366~unknown conserved protein in; E=1e-09 embl:CAC28817.1; (AL513466) conserved hypothetical protein; E=7e-08 pir:D82449; conserved hypothetical protein VCA0527 [imported] -; E=3e-07 COG: BH0366; COG0523 GTPases (G3E family); E=9e-11 sll1079; COG0378 Urease/hydrogenase-associated predicted GTPases; E=0.004 CT418; COG0536 Predicted GTPase; E=0.004 PFAM: PF01443; Viral (Superfamily 1) RNA hel; E=0.53 PF01583; Adenylylsulfate kinase; E=0.7 PF02223; Thymidylate kinase; E=0.0067; hypothetical protein 5428342 1794214 RB10061 Rhodopirellula baltica SH 1 hypothetical protein NP_869223.1 5427236 D 243090 CDS NP_869224.1 32476230 1796285 complement(5428367..5429641) 1 NC_005027.1 catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate; hydroxyglutarate oxidase 5429641 1796285 RB10062 Rhodopirellula baltica SH 1 hydroxyglutarate oxidase NP_869224.1 5428367 R 243090 CDS NP_869225.1 32476231 1794629 5429784..5431103 1 NC_005027.1 best DB hits: BLAST: ddbj:BAA82692.1; (AB013492) ORF14 [Bacillus halodurans] -----; E=4e-20 pir:D83132; hypothetical protein PA4108 [imported] - Pseudomonas; E=4e-17 pir:E71268; conserved hypothetical protein TP0912 - syphilis; E=4e-15 COG: BH0008; COG2206 HD-GYP domain; E=4e-21; phosphohydrolase involved in signal transduction 5431103 1794629 RB10065 Rhodopirellula baltica SH 1 phosphohydrolase involved in signal transduction NP_869225.1 5429784 D 243090 CDS NP_869226.1 32476232 1792139 complement(5431121..5433625) 1 NC_005027.1 hypothetical protein 5433625 1792139 RB10067 Rhodopirellula baltica SH 1 hypothetical protein NP_869226.1 5431121 R 243090 CDS NP_869227.1 32476233 1792495 complement(5433573..5434046) 1 NC_005027.1 lipoprotein 5434046 1792495 RB10069 Rhodopirellula baltica SH 1 lipoprotein NP_869227.1 5433573 R 243090 CDS NP_869228.1 32476234 1794512 complement(5434250..5435071) 1 NC_005027.1 best DB hits: BLAST: pir:G69742; hypothetical protein ybaJ - Bacillus subtilis -----; E=7e-13 pir:E83313; conserved hypothetical protein PA2650 [imported] -; E=9e-12 pir:S76919; hypothetical protein - Synechocystis sp. (strain PCC; E=6e-04 COG: BS_ybaJ; COG0500 SAM-dependent methyltransferases; E=7e-14 XF2471; COG2227; E=0.004; SAM-dependent methyltransferase 5435071 1794512 RB10074 Rhodopirellula baltica SH 1 SAM-dependent methyltransferase NP_869228.1 5434250 R 243090 CDS NP_869229.1 32476235 1793488 5435202..5436659 1 NC_005027.1 hypothetical protein 5436659 1793488 RB10075 Rhodopirellula baltica SH 1 hypothetical protein NP_869229.1 5435202 D 243090 CDS NP_869230.1 32476236 1796548 5436817..5437083 1 NC_005027.1 lipoprotein 5437083 1796548 RB10077 Rhodopirellula baltica SH 1 lipoprotein NP_869230.1 5436817 D 243090 CDS NP_869231.1 32476237 1796555 complement(5437154..5439220) 1 NC_005027.1 best DB hits: BLAST: pir:G82627; hypothetical protein XF1887 [imported] - Xylella; E=1e-40 PFAM: PF00949; Flavivirus helicase (NS3); E=0.44 PF00089; Trypsin; E=0.59 PF00571; CBS domain; E=0.31; hypothetical protein 5439220 1796555 RB10078 Rhodopirellula baltica SH 1 hypothetical protein NP_869231.1 5437154 R 243090 CDS NP_869232.1 32476238 1794357 complement(5439311..5441353) 1 NC_005027.1 best DB hits: BLAST: pir:G69815; ABC transporter (ATP-binding protein) homolog ygaD -; E=6e-66 gb:AAG49002.1; (AY013246) ABC transporter [Hordeum; E=4e-63 pir:A75590; ABC transporter ATP-binding protein - Deinococcus; E=6e-63 COG: BS_ygaD; COG1132 ABC-type multidrug/protein/lipid transport system,; E=6e-67 PFAM: PF00664; ABC transporter transmembrane re; E=8.5e-30 PF02463; SMC domain N terminal domain; E=0.53 PF01202; Shikimate kinase; E=0.019; ABC transporter ATP-binding protein 5441353 1794357 RB10081 Rhodopirellula baltica SH 1 ABC transporter ATP-binding protein NP_869232.1 5439311 R 243090 CDS NP_869233.1 32476239 1791388 5441648..5442409 1 NC_005027.1 hypothetical protein 5442409 1791388 RB10085 Rhodopirellula baltica SH 1 hypothetical protein NP_869233.1 5441648 D 243090 CDS NP_869234.2 161579027 1794706 5442529..5443422 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB07544.1; (AP001520) BH3825~unknown conserved protein; E=7e-27 swissprot:P39645; YWFI_BACSU HYPOTHETICAL 29.5 KD PROTEIN IN; E=5e-24 gb:AAG20186.1; (AE005095) Vng2021c [Halobacterium sp. NRC-1]; E=7e-24 COG: BH3825; COG3253 Uncharacterized ACR; E=7e-28; heme peroxidase 5443422 1794706 RB10088 Rhodopirellula baltica SH 1 heme peroxidase NP_869234.2 5442529 D 243090 CDS NP_869235.1 32476241 1794523 complement(5443485..5444303) 1 NC_005027.1 best DB hits: BLAST: embl:CAB66289.1; (AL136519) hypothetical protein SCC57A.21c.; E=3e-19 swissprot:P42419; IOLI_BACSU IOLI PROTEIN ----- pir: A69646; E=4e-07 ddbj:BAB06034.1; (AP001515) myo-inositol catabolism [Bacillus; E=1e-06 COG: BS_iolI; COG1082 Predicted endonucleases; E=4e-08 PFAM: PF01542; Hepatitis C virus core protei; E=0.23; hypothetical protein 5444303 1794523 RB10089 Rhodopirellula baltica SH 1 hypothetical protein NP_869235.1 5443485 R 243090 CDS NP_869236.1 32476242 1791617 5444432..5445460 1 NC_005027.1 best DB hits: BLAST: ref:XP_002773.1; CGI-105 protein [Homo sapiens]; E=4e-56 gb:AAD34100.1; AF151863_1 (AF151863) CGI-105 protein [Homo; E=6e-56 gb:AAF55945.1; (AE003737) CG6028 gene product [Drosophila; E=3e-54 COG: BH2000; COG0179 2-keto-4-pentenoate; E=1e-45 PFAM: PF01557; Fumarylacetoacetate (FAA) hydro; E=5.1e-83; 2-keto-4-pentenoate hydratase 5445460 1791617 RB10092 Rhodopirellula baltica SH 1 2-keto-4-pentenoate hydratase NP_869236.1 5444432 D 243090 CDS NP_869237.1 32476243 1792241 complement(5445866..5446891) 1 NC_005027.1 best DB hits: BLAST: gb:AAC09305.1; (AF047044) transposase [Nostoc sp. PCC; E=2e-41 pir:A32816; hypothetical protein, 33K - Pseudomonas atlantica; E=7e-35 pir:B81886; probable transposase NMA1185 [imported] - Neisseria; E=1e-30 PFAM: PF01548; Transposase; E=2.2e-05 PF02371; Transposase IS116/IS110/IS902; E=1.3e-25; transposase 5446891 1792241 RB10096 Rhodopirellula baltica SH 1 transposase NP_869237.1 5445866 R 243090 CDS NP_869238.1 32476244 1796802 5446658..5447284 1 NC_005027.1 hypothetical protein 5447284 1796802 RB10097 Rhodopirellula baltica SH 1 hypothetical protein NP_869238.1 5446658 D 243090 CDS NP_869239.1 32476245 1794083 5447310..5447453 1 NC_005027.1 hypothetical protein 5447453 1794083 RB10098 Rhodopirellula baltica SH 1 hypothetical protein NP_869239.1 5447310 D 243090 CDS NP_869240.1 32476246 1794847 5447566..5448546 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein 5448546 1794847 RB10099 Rhodopirellula baltica SH 1 hypothetical protein NP_869240.1 5447566 D 243090 CDS NP_869241.1 32476247 1791211 5448543..5449025 1 NC_005027.1 lipoprotein 5449025 1791211 RB10100 Rhodopirellula baltica SH 1 lipoprotein NP_869241.1 5448543 D 243090 CDS NP_869242.1 32476248 1793128 5449143..5450834 1 NC_005027.1 PMID: 10888605 best DB hits: BLAST: gb:AAF81717.1; AF252281_1 (AF252281) Kelch-like 1 protein [Mus; E=2e-09 gb:AAD39007.1; AF156857_1 (AF156857) actin-binding protein [Homo; E=3e-09 gb:AAK00278.1; AF285178_1 (AF285178) actin-binding protein MIPP; E=3e-08 COG: HI0148; COG3055 Uncharacterized BCR; E=9e-06 PFAM: PF01344; Kelch motif; E=0.0021; hypothetical protein 5450834 1793128 RB10103 Rhodopirellula baltica SH 1 hypothetical protein NP_869242.1 5449143 D 243090 CDS NP_869243.1 32476249 1793060 complement(5450855..5451202) 1 NC_005027.1 hypothetical protein 5451202 1793060 RB10105 Rhodopirellula baltica SH 1 hypothetical protein NP_869243.1 5450855 R 243090 CDS NP_869244.1 32476250 1790819 complement(5451244..5451624) 1 NC_005027.1 best DB hits: BLAST: gb:AAF48350.1; (AE003495) CG11590 gene product [Drosophila; E=7e-12 gb:AAB89277.1; (AE000966) periplasmic divalent cation tolerance; E=2e-11 pir:C69068; divalent cation tolerance protein - Methanobacterium; E=2e-11 COG: AF1978; COG1324 Uncharacterized protein involved in tolerance to; E=2e-12; periplasmic divalent cation tolerance protein (cutA) 5451624 cutA 1790819 cutA Rhodopirellula baltica SH 1 periplasmic divalent cation tolerance protein (cutA) NP_869244.1 5451244 R 243090 CDS NP_869245.1 32476251 1796459 complement(5451724..5451876) 1 NC_005027.1 hypothetical protein 5451876 1796459 RB10107 Rhodopirellula baltica SH 1 hypothetical protein NP_869245.1 5451724 R 243090 CDS NP_869246.1 32476252 1796408 5451913..5453247 1 NC_005027.1 PMID: 2540413 best DB hits: BLAST: swissprot:P13455; DP3B_PSEPU DNA POLYMERASE III, BETA CHAIN; E=1e-31 pir:C81713; DNA polymerase III, beta chain TC0347 [imported] -; E=1e-29 pir:E71559; probable DNA pol III (beta chain) - Chlamydia; E=1e-29 COG: CT075; COG0592 DNA polymerase III beta subunit; E=1e-30 PFAM: PF00712; DNA polymerase III beta subun; E=7.1e-16 PF02767; DNA polymerase III beta subun; E=2.4e-12 PF02768; DNA polymerase III beta subun; E=1e-10; DNA polymerase III, beta chain 5453247 dnaN 1796408 dnaN Rhodopirellula baltica SH 1 DNA polymerase III, beta chain NP_869246.1 5451913 D 243090 CDS NP_869247.1 32476253 1796612 5453244..5453639 1 NC_005027.1 best DB hits: BLAST: pir:D72328; hypothetical protein - Thermotoga maritima (strain MSB8); E=0.18; hypothetical protein 5453639 1796612 RB10109 Rhodopirellula baltica SH 1 hypothetical protein NP_869247.1 5453244 D 243090 CDS NP_869248.1 32476254 1794677 5453942..5454730 1 NC_005027.1 PMID: 2664449 PMID: 3062174 PMID: 8494895 best DB hits: BLAST: swissprot:P26721; HIS6_AZOBR HISF PROTEIN (CYCLASE) ----- pir:; E=6e-87 swissprot:O66567; HIS6_AQUAE HISF PROTEIN (CYCLASE) ----- pir:; E=1e-84 pir:H83002; imidazoleglycerol-phosphate synthase, cyclase subunit; E=2e-84 COG: aq_181; COG0107 Imidazoleglycerol-phosphate synthase; E=1e-85 PFAM: PF01791; Deoxyribose-phosphate aldolase; E=0.43 PF00977; Histidine biosynthesis protein; E=1.9e-135; imidazole glycerol phosphate synthase subunit HisF 5454730 hisF 1794677 hisF Rhodopirellula baltica SH 1 imidazole glycerol phosphate synthase subunit HisF NP_869248.1 5453942 D 243090 CDS NP_869249.1 32476255 1795643 5454845..5456416 1 NC_005027.1 PMID: 3036807 best DB hits: BLAST: swissprot:P12048; PUR9_BACSU BIFUNCTIONAL PURINE BIOSYNTHESIS; E=1e-125 ddbj:BAB04352.1; (AP001509); E=1e-124 gb:AAF33520.1; (AF170176) Salmonella typhimurium; E=1e-118 COG: BS_purH; COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only; E=1e-126 purH; COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP; E=1e-119 HI0887; COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only; E=1e-118 PFAM: PF02142; MGS-like domain; E=2.2e-46 PF01808; AICARFT/IMPCHase bienzyme; E=1.3e-113; bifunctional purine biosynthesis protein purH 5456416 purH 1795643 purH Rhodopirellula baltica SH 1 bifunctional purine biosynthesis protein purH NP_869249.1 5454845 D 243090 CDS NP_869250.1 32476256 1794165 5456435..5457214 1 NC_005027.1 PMID: 1896020 PMID: 7007653 PMID: 6355484 best DB hits: BLAST: swissprot:P26938; TRPC_AZOBR INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE; E=6e-55 swissprot:P94327; TRPC_BRAJA INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE; E=3e-52 swissprot:Q9ZFA7; TRPC_RHOSH INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE; E=2e-51 COG: XF0213; COG0134 Indole-3-glycerol phosphate synthase; E=5e-51 PFAM: PF00218; Indole-3-glycerol phosphate synthase; E=2.6e-111; indole-3-glycerol phosphate synthase 5457214 trpC 1794165 trpC Rhodopirellula baltica SH 1 indole-3-glycerol phosphate synthase NP_869250.1 5456435 D 243090 CDS NP_869251.1 32476257 1794000 5457222..5457395 1 NC_005027.1 hypothetical protein 5457395 1794000 RB10115 Rhodopirellula baltica SH 1 hypothetical protein NP_869251.1 5457222 D 243090 CDS NP_869252.1 32476258 1795188 5457531..5459000 1 NC_005027.1 PMID: 7910580 PMID: 1572648 best DB hits: BLAST: embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=4e-61 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=4e-61 pdb:1E2S; P Chain P, Crystal Structure Of An Arylsulfatase A; E=4e-60 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=5e-33 PFAM: PF00884; Sulfatase; E=3.7e-106; arylsulfatase 5459000 arsA 1795188 arsA Rhodopirellula baltica SH 1 arylsulfatase NP_869252.1 5457531 D 243090 CDS NP_869253.1 32476259 1793085 5458976..5460400 1 NC_005027.1 PMID: 10950929 PMID: 7910580 best DB hits: BLAST: pir:F70837; probable sulfatase (EC 3.1.6.-) atsG - Mycobacterium; E=9e-28 gb:AAG41945.1; AF304053_1 (AF304053) heparan N-sulfatase [Mus; E=5e-25 gb:AAF29467.1; (AF156255) N-sulfoglucosamine sulfohydrolase [Mus; E=6e-25 COG: Rv0296c; COG3119 Arylsulfatase A and related enzymes; E=8e-29 TM1703; COG1368 Phosphoglycerol transferase and related proteins,; E=0.008 PFAM: PF00884; Sulfatase; E=4e-22; sulfatase atsG 5460400 atsG 1793085 atsG Rhodopirellula baltica SH 1 sulfatase atsG NP_869253.1 5458976 D 243090 CDS NP_869254.1 32476260 1796394 complement(5460423..5462723) 1 NC_005027.1 best DB hits: BLAST: swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=9e-38 pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=3e-37 ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=7e-37 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=2e-38 PFAM: PF00069; Protein kinase domain; E=2.1e-52; serine/threonine-protein kinase pknB 5462723 pknB 1796394 pknB Rhodopirellula baltica SH 1 serine/threonine-protein kinase pknB NP_869254.1 5460423 R 243090 CDS NP_869255.1 32476261 1792873 complement(5462708..5463364) 1 NC_005027.1 PMID: 7768826 PMID: 7889934 PMID: 7889935 best DB hits: BLAST: pir:H82073; RNA polymerase sigma-E factor VC2467 [imported] - Vibrio; E=1e-05 swissprot:P44790; RPOE_HAEIN RNA POLYMERASE SIGMA-E FACTOR; E=9e-05 pir:C82583; RNA polymerase sigma-H factor XF2239 [imported] -; E=3e-04 COG: VC2467; COG1595 DNA-directed RNA polymerase specialized sigma; E=1e-06 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=0.0054 PF00140; Sigma-70 factor; E=2.7e-05; RNA polymerase sigma-E factor 5463364 rpoE 1792873 rpoE Rhodopirellula baltica SH 1 RNA polymerase sigma-E factor NP_869255.1 5462708 R 243090 CDS NP_869256.1 32476262 1792123 5463443..5463661 1 NC_005027.1 hypothetical protein 5463661 1792123 RB10123 Rhodopirellula baltica SH 1 hypothetical protein NP_869256.1 5463443 D 243090 CDS NP_869257.1 32476263 1795900 5463645..5465093 1 NC_005027.1 best DB hits: BLAST: pir:A82580; polyvinylalcohol dehydrogenase XF2259 [imported] -; E=0.003 pir:H69064; serinethreonine protein kinase related protein -; E=0.013 pir:C83171; conserved hypothetical protein PA3800 [imported] -; E=0.14 COG: XF2259; COG1520 Uncharacterized proteins of WD40-like repeat family; E=3e-04 PFAM: PF01011; PQQ enzyme repeat; E=0.0033; polyvinylalcohol dehydrogenase 5465093 1795900 RB10124 Rhodopirellula baltica SH 1 polyvinylalcohol dehydrogenase NP_869257.1 5463645 D 243090 CDS NP_869258.1 32476264 1792014 5465077..5465187 1 NC_005027.1 hypothetical protein 5465187 1792014 RB10125 Rhodopirellula baltica SH 1 hypothetical protein NP_869258.1 5465077 D 243090 CDS NP_869259.1 32476265 1794440 5465210..5465341 1 NC_005027.1 hypothetical protein 5465341 1794440 RB10126 Rhodopirellula baltica SH 1 hypothetical protein NP_869259.1 5465210 D 243090 CDS NP_869260.1 32476266 1796874 complement(5465320..5466726) 1 NC_005027.1 PMID: 8700860 PMID: 3399393 best DB hits: BLAST: gb:AAC59865.1; (U37373) up-regulated by thyroid hormone in; E=9e-60 ddbj:BAB14717.1; (AK023902) unnamed protein product [Homo; E=6e-59 pir:A58519; hypothetical 345 protein - Streptomyces coelicolor; E=5e-42 COG: slr1608; COG2133 Glucose/sorbosone dehydrogenases; E=1e-22; protein up-regulated by thyroid hormone- PQQ-dependent glucose dehydrogenase 5466726 1796874 RB10127 Rhodopirellula baltica SH 1 protein up-regulated by thyroid hormone- PQQ-dependent glucose dehydrogenase NP_869260.1 5465320 R 243090 CDS NP_869261.1 32476267 1796086 complement(5466713..5467429) 1 NC_005027.1 PMID: 9350870 PMID: 2925252 PMID: 1379319 PMID: 7516906 best DB hits: BLAST: gb:AAC45700.1; (U92214) macrophage infectivity potentiator; E=4e-36 gb:AAC45696.1; (U92229) macrophage infectivity potentiator; E=4e-35 gb:AAC45668.1; (U91606) macrophage infectivity potentiator; E=5e-35 COG: PA3262; COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1; E=1e-33 PFAM: PF01346; Domain amino terminal to FKBP-type p; E=7.4e-14 PF00254; FKBP-type peptidyl-prolyl cis-trans; E=2e-48; macrophage infectivity potentiator 5467429 mip 1796086 mip Rhodopirellula baltica SH 1 macrophage infectivity potentiator NP_869261.1 5466713 R 243090 CDS NP_869262.1 32476268 1790901 complement(5467814..5468908) 1 NC_005027.1 best DB hits: BLAST: swissprot:Q11053; PKNH_MYCTU PROBABLE SERINETHREONINE-PROTEIN; E=3e-35 embl:CAB94054.1; (AL358672) serinethreonine-protein; E=1e-34 embl:CAA10713.1; (AJ132604) hypothetical protein [Lactococcus; E=2e-33 COG: Rv1266c; COG0515 Serine/threonine protein kinases; E=3e-36 PFAM: PF00069; Protein kinase domain; E=7.6e-54; serine/threonine-protein kinase pknH 5468908 pknH 1790901 pknH Rhodopirellula baltica SH 1 serine/threonine-protein kinase pknH NP_869262.1 5467814 R 243090 CDS NP_869263.1 32476269 1791130 complement(5468929..5469243) 1 NC_005027.1 best DB hits: BLAST: gb:AAK05177.1; AE006340_10 (AE006340) 50S ribosomal protein L21; E=4e-10 pir:F82920; ribosomal protein L21 UU212 [imported] - Ureaplasma; E=3e-11 gb:AAC35614.1; (AF041468) ribosomal protein L21 [Guillardia; E=3e-10 COG: Rv2442c; COG0261 Ribosomal protein L21; E=3e-07 PFAM: PF00829; Ribosomal prokaryotic L21 prot; E=2.2e-36; 50S ribosomal protein L21 5469243 1791130 RB10134 Rhodopirellula baltica SH 1 50S ribosomal protein L21 NP_869263.1 5468929 R 243090 CDS NP_869264.1 32476270 1790083 complement(5469167..5469418) 1 NC_005027.1 hypothetical protein 5469418 1790083 RB10135 Rhodopirellula baltica SH 1 hypothetical protein NP_869264.1 5469167 R 243090 CDS NP_869265.1 32476271 1789972 5469419..5469577 1 NC_005027.1 hypothetical protein 5469577 1789972 RB10136 Rhodopirellula baltica SH 1 hypothetical protein NP_869265.1 5469419 D 243090 CDS NP_869266.1 32476272 1796130 complement(5469551..5469772) 1 NC_005027.1 hypothetical protein 5469772 1796130 RB10137 Rhodopirellula baltica SH 1 hypothetical protein NP_869266.1 5469551 R 243090 CDS NP_869267.1 32476273 1791566 complement(5469878..5470681) 1 NC_005027.1 best DB hits: BLAST: pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=0.018; membrane lipoprotein 5470681 1791566 RB10138 Rhodopirellula baltica SH 1 membrane lipoprotein NP_869267.1 5469878 R 243090 CDS NP_869268.1 32476274 1796471 complement(5470782..5471021) 1 NC_005027.1 hypothetical protein 5471021 1796471 RB10139 Rhodopirellula baltica SH 1 hypothetical protein NP_869268.1 5470782 R 243090 CDS NP_869269.1 32476275 1796261 5471107..5472927 1 NC_005027.1 best DB hits: BLAST: pir:B82127; sulfate permease VC2031 [imported] -; E=1e-89 pir:G83325; probable sulfate transporter PA2563 [imported] -; E=5e-53 ddbj:BAB04133.1; (AP001508) sulfate permease [Bacillus; E=1e-51 COG: VC2031; COG0659 Sulfate permease and related transporters (MFS; E=1e-90 PFAM: PF00916; Sulfate transporter family; E=9.5e-12 PF00955; HCO3- transporter family; E=0.86 PF00916; Sulfate transporter family; E=4.5e-54; sulfate permease 5472927 1796261 RB10140 Rhodopirellula baltica SH 1 sulfate permease NP_869269.1 5471107 D 243090 CDS NP_869270.1 32476276 1790456 complement(5472900..5473064) 1 NC_005027.1 hypothetical protein 5473064 1790456 RB10141 Rhodopirellula baltica SH 1 hypothetical protein NP_869270.1 5472900 R 243090 CDS NP_869271.1 32476277 1797204 5473137..5474159 1 NC_005027.1 signal peptide 5474159 1797204 RB10142 Rhodopirellula baltica SH 1 signal peptide NP_869271.1 5473137 D 243090 CDS NP_869272.1 32476278 1796089 5474239..5475198 1 NC_005027.1 PMID: 1909424 best DB hits: BLAST: swissprot:P26223; XYNB_BUTFI ENDO-1,4-BETA-XYLANASE B (XYLANASE B); E=2e-18 prf:1718306A; xylanase [Butyrivibrio fibrisolvens]; E=2e-18 gb:AAK04528.1; AE006280_4 (AE006280) sugar hydrolase [Lactococcus; E=1e-17 COG: DR0821_2; COG0657 Acetyl esterase; E=6e-06 DR0165; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; E=0.004 PFAM: PF01738; Dienelactone hydrolase; E=0.81 PF00561; alpha/beta hydrolase fold; E=0.0016; endo-1,4-beta-xylanase B 5475198 1796089 RB10144 Rhodopirellula baltica SH 1 endo-1,4-beta-xylanase B NP_869272.1 5474239 D 243090 CDS NP_869273.1 32476279 1797064 complement(5475236..5476630) 1 NC_005027.1 signal peptide 5476630 1797064 RB10145 Rhodopirellula baltica SH 1 signal peptide NP_869273.1 5475236 R 243090 CDS NP_869274.1 32476280 1792655 complement(5476557..5476874) 1 NC_005027.1 hypothetical protein 5476874 1792655 RB10146 Rhodopirellula baltica SH 1 hypothetical protein NP_869274.1 5476557 R 243090 CDS NP_869275.1 32476281 1794333 complement(5476994..5477758) 1 NC_005027.1 signal peptide 5477758 1794333 RB10148 Rhodopirellula baltica SH 1 signal peptide NP_869275.1 5476994 R 243090 CDS NP_869276.1 32476282 1792413 complement(5477832..5487368) 1 NC_005027.1 best DB hits: BLAST: swissprot:P33450; FAT_DROME CADHERIN-RELATED TUMOR SUPPRESSOR; E=0.68 pir:IJFFTM; cadherin-related tumor suppressor precursor - fruit fly; E=0.68 gb:AAF51036.1; (AE003577) ft gene product [Drosophila melanogaster]; E=0.68 PFAM: PF00028; Cadherin domain; E=0.014 PF00801; PKD domain; E=0.0048 PF02101; Ocular albinism type 1 protei; E=0.26; cadherin-related protein 5487368 1959133 1792413 1959133 Rhodopirellula baltica SH 1 cadherin-related protein NP_869276.1 5477832 R 243090 CDS NP_869277.1 32476283 1793864 complement(5487365..5487658) 1 NC_005027.1 hypothetical protein 5487658 1793864 RB10157 Rhodopirellula baltica SH 1 hypothetical protein NP_869277.1 5487365 R 243090 CDS NP_869278.1 32476284 1793528 5487643..5489772 1 NC_005027.1 best DB hits: PFAM: PF00404; Dockerin type I repeat; E=0.039; dockerin repeat-containing protein 5489772 1793528 RB10159 Rhodopirellula baltica SH 1 dockerin repeat-containing protein NP_869278.1 5487643 D 243090 CDS NP_869279.1 32476285 1794698 complement(5489812..5493105) 1 NC_005027.1 PMID: 835671 best DB hits: BLAST: swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=3e-34 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=5e-33 pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=9e-32 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=5e-34 PFAM: PF00069; Protein kinase domain; E=1.3e-46 PF00400; WD domain, G-beta repeat; E=0.00029; serine/threonine-protein kinase pknB 5493105 pknB 1794698 pknB Rhodopirellula baltica SH 1 serine/threonine-protein kinase pknB NP_869279.1 5489812 R 243090 CDS NP_869280.1 32476286 1795457 complement(5493115..5493693) 1 NC_005027.1 PMID: 12024217 best DB hits: BLAST: pir:T02748; hypothetical protein R31180_1 - human ----- gb:; E=0.38; sigma factor 5493693 1795457 RB10164 Rhodopirellula baltica SH 1 sigma factor NP_869280.1 5493115 R 243090 CDS NP_869281.1 32476287 1795437 complement(5493761..5496907) 1 NC_005027.1 PMID: 7836292 best DB hits: BLAST: gb:AAA65703.1; (U12976) polyhydroxyalkanoate depolymerase; E=0.16 swissprot:P52090; PHA1_PSELE POLY(3-HYDROXYALKANOATE) DEPOLYMERASE; E=0.53 PFAM: PF01841; Transglutaminase-like superfam; E=0.00014; polyhydroxyalkanoate depolymerase 5496907 1795437 RB10165 Rhodopirellula baltica SH 1 polyhydroxyalkanoate depolymerase NP_869281.1 5493761 R 243090 CDS NP_869282.1 32476288 1795236 complement(5496917..5497096) 1 NC_005027.1 hypothetical protein 5497096 1795236 RB10167 Rhodopirellula baltica SH 1 hypothetical protein NP_869282.1 5496917 R 243090 CDS NP_869283.1 32476289 1795157 complement(5497002..5497235) 1 NC_005027.1 hypothetical protein 5497235 1795157 RB10168 Rhodopirellula baltica SH 1 hypothetical protein NP_869283.1 5497002 R 243090 CDS NP_869284.1 32476290 1792293 5497260..5498231 1 NC_005027.1 PMID: 2188958 best DB hits: BLAST: swissprot:P16703; CYSM_ECOLI CYSTEINE SYNTHASE B (O-ACETYLSERINE; E=1e-30 pir:D82758; cysteine synthase XF0831 [imported] - Xylella fastidiosa; E=1e-30 swissprot:P95230; CYSK_MYCTU CYSTEINE SYNTHASE A (O-ACETYLSERINE; E=2e-30 COG: cysM; COG0031 Cysteine synthase; E=1e-31 PFAM: PF00291; Pyridoxal-phosphate dependent enzyme; E=5.9e-51; cysteine synthase B 5498231 cysM 1792293 cysM Rhodopirellula baltica SH 1 cysteine synthase B NP_869284.1 5497260 D 243090 CDS NP_869285.1 32476291 1796569 complement(5498330..5499799) 1 NC_005027.1 PMID: 9369242 best DB hits: BLAST: gb:AAA64636.1; (U07235) aldehyde dehydrogenase [Mus musculus]; E=1e-163 gb:AAA51693.1; (M20456) aldehyde dehydrogenase [Homo sapiens]; E=1e-163 pir:DEHUE2; aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) 2 precursor,; E=1e-162 COG: BH0539; COG1012 NAD-dependent aldehyde dehydrogenases; E=1e-156 PFAM: PF00171; Aldehyde dehydrogenase; E=1.5e-240; aldehyde dehydrogenase 5499799 1796569 RB10172 Rhodopirellula baltica SH 1 aldehyde dehydrogenase NP_869285.1 5498330 R 243090 CDS NP_869286.1 32476292 1790836 complement(5499953..5501080) 1 NC_005027.1 best DB hits: BLAST: pir:E83192; hypothetical protein PA3615 [imported] - Pseudomonas; E=2e-63 embl:CAC01341.1; (AL390975) hypothetical protein [Streptomyces; E=8e-33 pir:C81216; conserved hypothetical protein NMB0283 [imported] -; E=5e-29 COG: PA3615; COG1611 Predicted Rossmann fold nucleotide-binding protein; E=2e-64; hypothetical protein 5501080 1790836 RB10175 Rhodopirellula baltica SH 1 hypothetical protein NP_869286.1 5499953 R 243090 CDS NP_869287.1 32476293 1791390 complement(5500977..5501195) 1 NC_005027.1 hypothetical protein 5501195 1791390 RB10176 Rhodopirellula baltica SH 1 hypothetical protein NP_869287.1 5500977 R 243090 CDS NP_869288.1 32476294 1796067 5501183..5502373 1 NC_005027.1 best DB hits: BLAST: pir:A72312; conserved hypothetical protein - Thermotoga maritima; E=4e-47 pir:S74581; hypothetical protein slr1411 - Synechocystis sp. (strain; E=1e-41 pir:E69014; hypothetical protein MTH1109 - Methanobacterium; E=6e-37 COG: TM0964; COG1641 Uncharacterized ACR; E=4e-48 PFAM: PF01969; Protein of unknown function DUF111; E=6.1e-89; hypothetical protein 5502373 1796067 RB10177 Rhodopirellula baltica SH 1 hypothetical protein NP_869288.1 5501183 D 243090 CDS NP_869289.1 32476295 1790484 5502418..5502570 1 NC_005027.1 hypothetical protein 5502570 1790484 RB10178 Rhodopirellula baltica SH 1 hypothetical protein NP_869289.1 5502418 D 243090 CDS NP_869290.1 32476296 1797173 5502594..5503865 1 NC_005027.1 hypothetical protein 5503865 1797173 RB10179 Rhodopirellula baltica SH 1 hypothetical protein NP_869290.1 5502594 D 243090 CDS NP_869291.1 32476297 1792923 5503948..5505756 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB06575.1; (AP001516) peptidase [Bacillus halodurans]; E=1e-133 pir:T44581; thimet oligopeptidase (EC 3.4.24.15) [imported] -; E=1e-133 swissprot:O31605; PEPF_BACSU OLIGOENDOPEPTIDASE F HOMOLOG -----; E=1e-133 COG: BH2856; COG1164 Oligoendopeptidase F; E=1e-134 PFAM: PF01432; Peptidase M3; E=2.5e-94; peptidase 5505756 1792923 RB10180 Rhodopirellula baltica SH 1 peptidase NP_869291.1 5503948 D 243090 CDS NP_869292.1 32476298 1796056 5505633..5507300 1 NC_005027.1 PMID: 7921236 best DB hits: BLAST: swissprot:P36947; RBSA_BACSU RIBOSE TRANSPORT ATP-BINDING PROTEIN; E=4e-92 embl:CAB66285.1; (AL136519) ABC transporter protein, ATP binding; E=2e-90 gb:AAK05735.1; AE006394_5 (AE006394) ribose ABC transporter ATP; E=1e-89 COG: BS_rbsA; COG1129 ABC-type sugar (aldose) transport system, ATPase; E=4e-93 PFAM: PF02239; Cytochrome D1 heme domain; E=0.31 PF00005; ABC transporter; E=3e-50; ribose transport ATP-binding protein rbsA 5507300 rbsA 1796056 rbsA Rhodopirellula baltica SH 1 ribose transport ATP-binding protein rbsA NP_869292.1 5505633 D 243090 CDS NP_869293.1 32476299 1796970 complement(5507302..5507613) 1 NC_005027.1 hypothetical protein 5507613 1796970 RB10182 Rhodopirellula baltica SH 1 hypothetical protein NP_869293.1 5507302 R 243090 CDS NP_869294.1 32476300 1795326 complement(5507610..5507891) 1 NC_005027.1 hypothetical protein 5507891 1795326 RB10184 Rhodopirellula baltica SH 1 hypothetical protein NP_869294.1 5507610 R 243090 CDS NP_869295.1 32476301 1794735 complement(5508081..5508716) 1 NC_005027.1 PMID: 7798145 best DB hits: BLAST: ddbj:BAB07483.1; (AP001519) uracil phosphoribosyltransferase; E=8e-45 pir:T48896; uracil phosphoribosyltransferase (EC 2.4.2.9) upp; E=3e-43 swissprot:P39149; UPP_BACSU URACIL PHOSPHORIBOSYLTRANSFERASE (UMP; E=8e-42 COG: BH3764; COG0035 Uracil phosphoribosyltransferase; E=7e-46 PFAM: PF00156; Phosphoribosyl transferase doma; E=6.1e-05; uracil phosphoribosyltransferase 5508716 upp 1794735 upp Rhodopirellula baltica SH 1 uracil phosphoribosyltransferase NP_869295.1 5508081 R 243090 CDS NP_869296.1 32476302 1792783 complement(5508840..5510252) 1 NC_005027.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 5510252 pyrC 1792783 pyrC Rhodopirellula baltica SH 1 dihydroorotase NP_869296.1 5508840 R 243090 CDS NP_869297.1 32476303 1790025 complement(5510280..5510453) 1 NC_005027.1 hypothetical protein 5510453 1790025 RB10194 Rhodopirellula baltica SH 1 hypothetical protein NP_869297.1 5510280 R 243090 CDS NP_869298.1 32476304 1796911 complement(5510484..5511278) 1 NC_005027.1 best DB hits: BLAST: pir:T34929; hypothetical protein SC3F9.07 SC3F9.07 - Streptomyces; E=0.004 embl:CAB94634.1; (AL359215) secreted glycosyl hydrolase.; E=0.013 ddbj:BAB04428.1; (AP001509) BH0709~unknown conserved protein in; E=0.39; hypothetical protein 5511278 1796911 RB10195 Rhodopirellula baltica SH 1 hypothetical protein NP_869298.1 5510484 R 243090 CDS NP_869299.1 32476305 1796464 complement(5511281..5512591) 1 NC_005027.1 best DB hits: BLAST: pir:S76571; hypothetical protein - Synechocystis sp. (strain PCC; E=1e-06 pir:C72255; hypothetical protein - Thermotoga maritima (strain MSB8); E=5e-05 swissprot:P38527; RHO_THEMA TRANSCRIPTION TERMINATION FACTOR RHO; E=0.71 COG: sll0185; COG3330 Uncharacterized BCR; E=1e-07; hypothetical protein 5512591 1796464 RB10196 Rhodopirellula baltica SH 1 hypothetical protein NP_869299.1 5511281 R 243090 CDS NP_869300.1 32476306 1796432 complement(5512584..5512721) 1 NC_005027.1 hypothetical protein 5512721 1796432 RB10199 Rhodopirellula baltica SH 1 hypothetical protein NP_869300.1 5512584 R 243090 CDS NP_869301.1 32476307 1791494 complement(5512786..5513028) 1 NC_005027.1 hypothetical protein 5513028 1791494 RB10200 Rhodopirellula baltica SH 1 hypothetical protein NP_869301.1 5512786 R 243090 CDS NP_869302.1 32476308 1792628 5512988..5513224 1 NC_005027.1 hypothetical protein 5513224 1792628 RB10202 Rhodopirellula baltica SH 1 hypothetical protein NP_869302.1 5512988 D 243090 CDS NP_869303.1 32476309 1796352 5513405..5513851 1 NC_005027.1 hypothetical protein 5513851 1796352 RB10204 Rhodopirellula baltica SH 1 hypothetical protein NP_869303.1 5513405 D 243090 CDS NP_869304.1 32476310 1790743 5513878..5514927 1 NC_005027.1 PMID: 2902844 best DB hits: BLAST: swissprot:P15012; ATP6_RHORU ATP SYNTHASE A CHAIN (PROTEIN 6); E=3e-09 gb:AAD12651.1; (U02970) H(+)-transporting ATPase [Prototheca; E=1e-08 gb:AAF24787.1; U17009_19 (U17009) ATP synthase F0 subunit 6; E=6e-08 COG: XF1149; COG0356 F0F1-type ATP synthase a subunit; E=5e-07 PFAM: PF00119; ATP synthase A chain; E=3.3e-12; protein ATP synthase A chain 5514927 atpB 1790743 atpB Rhodopirellula baltica SH 1 protein ATP synthase A chain NP_869304.1 5513878 D 243090 CDS NP_869305.1 32476311 1796925 5514957..5515097 1 NC_005027.1 hypothetical protein 5515097 1796925 RB10208 Rhodopirellula baltica SH 1 hypothetical protein NP_869305.1 5514957 D 243090 CDS NP_869306.1 32476312 1790923 5515135..5515467 1 NC_005027.1 PMID: 1448623 PMID: 1328152 best DB hits: BLAST: pir:I39786; H+-transporting ATP synthase (EC 3.6.1.34) C chain -; E=0.076 pir:JN0362; H+-transporting ATP synthase (EC 3.6.1.34) lipid-binding; E=0.36 swissprot:P26682; ATPL_ENTHR ATP SYNTHASE C CHAIN (LIPID-BINDING; E=0.38 PFAM: PF00137; ATP synthase subunit C; E=7.6e-07; H+-transporting ATP synthase C chain 5515467 atpE 1790923 atpE Rhodopirellula baltica SH 1 H+-transporting ATP synthase C chain NP_869306.1 5515135 D 243090 CDS NP_869307.1 32476313 1791780 5515421..5516206 1 NC_005027.1 PMID: 2521483 best DB hits: BLAST: swissprot:P20601; ATPF_BACME ATP SYNTHASE B CHAIN ----- pir:; E=7e-12 ddbj:BAB07477.1; (AP001519) ATP synthase subunit b [Bacillus; E=7e-11 gb:AAF22494.1; AF098522_4 (AF098522) F1F0-ATPase subunit b; E=1e-09 COG: BH3758; COG0711 F0F1-type ATP synthase b subunit; E=6e-12 PFAM: PF00430; ATP synthase B/B' CF(0); E=1.7e-28; protein ATP synthase B chain 5516206 atpF 1791780 atpF Rhodopirellula baltica SH 1 protein ATP synthase B chain NP_869307.1 5515421 D 243090 CDS NP_869308.1 32476314 1794931 5516217..5516900 1 NC_005027.1 PMID: 8363578 best DB hits: BLAST: ddbj:BAA23685.1; (AB006151) proton-translocating ATPase, delta; E=7e-14 gb:AAC64903.1; (AF008185) oligomycin sensitivity conferring; E=2e-12 pir:S36964; H+-transporting ATP synthase (EC 3.6.1.34) delta chain -; E=3e-12 COG: sll1325; COG0712 F0F1-type ATP synthase delta subunit (mitochondrial; E=6e-13 Rv1307_2; COG0712 F0F1-type ATP synthase delta subunit; E=6e-05 HI0482; COG0712 F0F1-type ATP synthase delta subunit (mitochondrial; E=6e-04 PFAM: PF00213; ATP synthase delta (OSCP) subunit; E=1e-33; ATP synthase subunit delta 5516900 atpD 1794931 atpD Rhodopirellula baltica SH 1 ATP synthase subunit delta NP_869308.1 5516217 D 243090 CDS NP_869309.1 32476315 1793842 5516975..5518498 1 NC_005027.1 produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha 5518498 atpA 1793842 atpA Rhodopirellula baltica SH 1 ATP synthase F0F1 subunit alpha NP_869309.1 5516975 D 243090 CDS NP_869310.1 32476316 1796003 5518520..5519410 1 NC_005027.1 PMID: 1833620,7961438 best DB hits: BLAST: gb:AAG48362.1; AF330160_9 (AF330160) ATP synthase gamma subunit; E=1e-33 pir:C69592; H+-transporting ATP synthase (EC 3.6.1.34) gamma chain -; E=1e-33 swissprot:P37810; ATPG_BACSU ATP SYNTHASE GAMMA CHAIN -----; E=4e-33 COG: BS_atpG; COG0224 F0F1-type ATP synthase gamma subunit; E=1e-34 PFAM: PF00231; ATP synthase; E=2.7e-85; ATP synthase gamma subunit 5519410 atpG 1796003 atpG Rhodopirellula baltica SH 1 ATP synthase gamma subunit NP_869310.1 5518520 D 243090 CDS NP_869311.1 32476317 1792043 5519560..5520999 1 NC_005027.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta 5520999 atpB 1792043 atpB Rhodopirellula baltica SH 1 ATP synthase F0F1 subunit beta NP_869311.1 5519560 D 243090 CDS NP_869312.1 32476318 1793344 5521003..5521389 1 NC_005027.1 PMID: 2878921 PMID: 1533602 best DB hits: BLAST: gb:AAC35683.1; (AF041468) ATP synthase CF1 subunit e [Guillardia; E=8e-10 gb:AAF13019.1; AF022186_193 (AF022186) unknown; ATP synthase CF1; E=1e-09 swissprot:P06542; ATPE_ANASP ATP SYNTHASE EPSILON CHAIN -----; E=3e-09 COG: slr1330; COG0355 F0F1-type ATP synthase epsilon subunit; E=2e-06 atpC; COG0355 F0F1-type ATP synthase epsilon subunit (mitochondrial; E=0.008 PFAM: PF02823; ATP synthase, Delta/Epsilon cha; E=2.3e-16; ATP synthase CF1 subunit e 5521389 atpE 1793344 atpE Rhodopirellula baltica SH 1 ATP synthase CF1 subunit e NP_869312.1 5521003 D 243090 CDS NP_869313.1 32476319 1796705 complement(5521409..5521615) 1 NC_005027.1 hypothetical protein 5521615 1796705 RB10220 Rhodopirellula baltica SH 1 hypothetical protein NP_869313.1 5521409 R 243090 CDS NP_869314.1 32476320 1790332 5521594..5522802 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S76765; hypothetical protein - Synechocystis sp. (strain PCC; E=2e-12 pir:T51140; disease resistance protein RPS4 [imported] - Arabidopsis; E=0.13 pir:T51141; disease resistance protein rps4 [imported] - Arabidopsis; E=0.13; disease resistance protein 5522802 1790332 RB10221 Rhodopirellula baltica SH 1 disease resistance protein NP_869314.1 5521594 D 243090 CDS NP_869315.1 32476321 1795572 5522883..5523362 1 NC_005027.1 hypothetical protein 5523362 1795572 RB10223 Rhodopirellula baltica SH 1 hypothetical protein NP_869315.1 5522883 D 243090 CDS NP_869316.1 32476322 1791604 5523429..5524040 1 NC_005027.1 hypothetical protein 5524040 1791604 RB10224 Rhodopirellula baltica SH 1 hypothetical protein NP_869316.1 5523429 D 243090 CDS NP_869317.1 32476323 1794992 5524018..5525178 1 NC_005027.1 PMID: 9687406 best DB hits: BLAST: embl:CAB61226.1; (Y17305) hypothetical protein [Bacillus; E=0.13; hypothetical protein 5525178 1794992 RB10226 Rhodopirellula baltica SH 1 hypothetical protein NP_869317.1 5524018 D 243090 CDS NP_869318.1 32476324 1796444 complement(5525241..5526581) 1 NC_005027.1 PMID: 9537320 best DB hits: BLAST: pir:B70428; general secretion pathway protein E - Aquifex aeolicus; E=7e-21 pir:C75333; general secretion pathway protein E - Deinococcus; E=6e-19 pir:C83313; probable type II secretion protein PA2677 [imported] -; E=1e-18 COG: aq_1474; COG2804 Predicted ATPases involved in pili biogenesis, PilB; E=6e-22 PFAM: PF00437; Bacterial type II secretion system p; E=0.00098; general secretion pathway protein E 5526581 hofB 1796444 hofB Rhodopirellula baltica SH 1 general secretion pathway protein E NP_869318.1 5525241 R 243090 CDS NP_869319.1 32476325 1792510 complement(5526582..5527784) 1 NC_005027.1 PMID: 8100347 PMID: 1676385 best DB hits: BLAST: pir:F82321; twitching motility protein PilT VC0462 [imported] -; E=2e-65 pir:C70365; twitching motility protein PilT - Aquifex aeolicus; E=1e-63 swissprot:P24559; PILT_PSEAE TWITCHING MOBILITY PROTEIN -----; E=3e-61 COG: VC0462; COG2805 Predicted ATPases involved in pili biogenesis, PilT; E=1e-66 XF1517; COG2804 Predicted ATPases involved in pili biogenesis, PilB; E=2e-22 PFAM: PF00155; Aminotransferase class-I; E=0.3 PF00448; SRP54-type protein, GTPase do; E=0.32 PF00437; Bacterial type II secretion s; E=1.5e-34; twitching motility protein PilT 5527784 pilT 1792510 pilT Rhodopirellula baltica SH 1 twitching motility protein PilT NP_869319.1 5526582 R 243090 CDS NP_869320.1 32476326 1796184 5528046..5529317 1 NC_005027.1 PMID: 8987664 PMID: 9817849 PMID: 8987664 best DB hits: BLAST: pdb:1BRW; B Chain B, The Crystal Structure Of Pyrimidine; E=3e-70 swissprot:P77836; PDP_BACST PYRIMIDINE-NUCLEOSIDE PHOSPHORYLASE; E=3e-69 swissprot:O53366; DEOA_MYCTU THYMIDINE PHOSPHORYLASE (TDRPASE); E=1e-68 COG: Rv3314c; COG0213 Thymidine phosphorylase; E=1e-69 PFAM: PF02885; Glycosyl transferase,; E=1.4e-15 PF00591; Glycosyl transferase,; E=6.1e-39; pyrimidine-nucleoside phosphorylase (PYNP) 5529317 pyn 1796184 pyn Rhodopirellula baltica SH 1 pyrimidine-nucleoside phosphorylase (PYNP) NP_869320.1 5528046 D 243090 CDS NP_869321.1 32476327 1794699 5529398..5530981 1 NC_005027.1 PMID: 10336424 best DB hits: BLAST: gb:AAG58881.1; AE005599_13 (AE005599) sulfatase; E=5e-29 swissprot:P31447; YIDJ_ECOLI SULFATASE YIDJ -----; E=1e-28 pir:E83642; choline sulfatase PA0031 [imported] - Pseudomonas; E=1e-27 COG: yidJ; COG3119 Arylsulfatase A and related enzymes; E=1e-29 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=9e-06 VNG1337C; COG3119 Arylsulfatase A and related enzymes; E=2e-04 PFAM: PF00884; Sulfatase; E=9.3e-36; sulfatase yidj 5530981 yidJ 1794699 yidJ Rhodopirellula baltica SH 1 sulfatase yidj NP_869321.1 5529398 D 243090 CDS NP_869322.1 32476328 1796202 5531205..5531750 1 NC_005027.1 best DB hits: BLAST: pir:G83172; hypothetical protein PA3783 [imported] - Pseudomonas; E=9e-28 pir:G69776; conserved hypothetical protein yddQ - Bacillus subtilis; E=9e-15 ddbj:BAB11178.1; (AB007648) gene_id:MKD15.9~pir C72413~similar to; E=2e-13 COG: PA3783; COG1335 Amidases related to nicotinamidase; E=9e-29 TM0133; COG1535 2,3-Dihydro-2,3 dihydroxybenzoate synthase; E=2e-06 AF2151; COG1335 Amidases related to nicotinamidase; E=2e-06 PFAM: PF00857; Isochorismatase; E=5.7e-11; hydrolase 5531750 1796202 RB10235 Rhodopirellula baltica SH 1 hydrolase NP_869322.1 5531205 D 243090 CDS NP_869323.1 32476329 1791917 5531834..5533567 1 NC_005027.1 hypothetical protein 5533567 1791917 RB10238 Rhodopirellula baltica SH 1 hypothetical protein NP_869323.1 5531834 D 243090 CDS NP_869324.1 32476330 1797194 5533582..5535099 1 NC_005027.1 hypothetical protein 5535099 1797194 RB10240 Rhodopirellula baltica SH 1 hypothetical protein NP_869324.1 5533582 D 243090 CDS NP_869325.1 32476331 1795013 complement(5535126..5536118) 1 NC_005027.1 PMID: 8016869 PMID: 9276481 best DB hits: BLAST: embl:CAA10745.1; (AJ132708) DnaJ1 protein [Anabaena sp.]; E=1e-39 swissprot:P50027; DNJH_SYNY3 DNAJ-LIKE PROTEIN SLR0093 -----; E=1e-39 embl:CAA10739.1; (AJ132704) DnaJ1 protein [Anabaena variabilis]; E=2e-39 COG: slr0093; COG2214 Molecular chaperones, DnaJ class; E=9e-41 TP0217; COG0484 Molecular chaperones (contain C-terminal Zn finger; E=2e-27 XF2233; COG2214 Molecular chaperones, DnaJ class; E=1e-26 PFAM: PF00226; DnaJ domain; E=3.6e-37 PF01556; DnaJ C terminal region; E=0.48; DnaJ1 protein 5536118 dnaJ 1795013 dnaJ Rhodopirellula baltica SH 1 DnaJ1 protein NP_869325.1 5535126 R 243090 CDS NP_869326.1 32476332 1795110 5536144..5537874 1 NC_005027.1 hypothetical protein 5537874 1795110 RB10243 Rhodopirellula baltica SH 1 hypothetical protein NP_869326.1 5536144 D 243090 CDS NP_869327.1 32476333 1794013 5537951..5538937 1 NC_005027.1 PMID: 3398051 PMID: 2026135 PMID: 8515812 best DB hits: BLAST: pir:C82615; haloalkane dehalogenase XF1965 [imported] - Xylella; E=2e-36 swissprot:Q50600; YJ33_MYCTU HYPOTHETICAL 32.2 KDA PROTEIN RV1833C; E=3e-23 pdb:1BEZ; Haloalkane Dehalogenase Mutant With Trp 175 Replaced; E=3e-19 COG: XF1965; COG0596 Predicted hydrolases or acyltransferases (alpha/beta; E=2e-37 Rv1833c; COG0596 Predicted hydrolases or acyltransferases; E=3e-24 Rv2579; COG0596 Predicted hydrolases or acyltransferases (alpha/beta; E=1e-16 PFAM: PF00561; alpha/beta hydrolase fold; E=3.5e-20; haloalkane dehalogenase 5538937 dhlA 1794013 dhlA Rhodopirellula baltica SH 1 haloalkane dehalogenase NP_869327.1 5537951 D 243090 CDS NP_869328.1 32476334 1793654 5538891..5539841 1 NC_005027.1 PMID: 9651254 PMID: 10215859 PMID: 10848995 PMID: 11073907 best DB hits: BLAST: gb:AAG32953.1; (AF032114) unknown [Methylobacterium extorquens]; E=2e-21 pir:D69199; conserved hypothetical protein MTH743 - Methanobacterium; E=6e-18 swissprot:Q57680; Y227_METJA HYPOTHETICAL PROTEIN MJ0227 -----; E=2e-16 COG: MTH743; COG1767 Uncharacterized ACR; E=5e-19 PFAM: PF01874; CitG family; E=1.9e-07; hypothetical protein 5539841 1793654 RB10246 Rhodopirellula baltica SH 1 hypothetical protein NP_869328.1 5538891 D 243090 CDS NP_869329.1 32476335 1790577 complement(5539851..5541332) 1 NC_005027.1 PMID: 9371463 best DB hits: BLAST: pir:D69109; serine proteinase HtrA - Methanobacterium; E=0.014 embl:CAA72164.1; (Y11304) ORF E0 [Rhodobacter capsulatus]; E=0.018 gb:AAF87931.1; AF163841_10 (AF163841) serine protease; E=0.041 COG: MTH1813; COG0265 Trypsin-like serine proteases, typically; E=0.001 PFAM: PF00595; PDZ domain (Also known as DHR; E=0.0018; serine proteinase HtrA 5541332 htrA 1790577 htrA Rhodopirellula baltica SH 1 serine proteinase HtrA NP_869329.1 5539851 R 243090 CDS NP_869330.1 32476336 1793026 5541386..5542546 1 NC_005027.1 best DB hits: BLAST: embl:CAA51674.1; (X73149) Nourseothricin acetyltransferase; E=0.069 gb:AAD47630.1; AF156670_1 (AF156670) nourseothricin; E=0.069 pir:E69786; ribosomal-protein-alanine N-acetyltransfer homolog ydiD; E=0.081 COG: BS_ydiD; COG0456 Acetyltransferases; E=0.008 PFAM: PF00583; Acetyltransferase (GNAT) family; E=7.9e-11; nourseothricin acetyltransferase 5542546 1793026 RB10252 Rhodopirellula baltica SH 1 nourseothricin acetyltransferase NP_869330.1 5541386 D 243090 CDS NP_869331.1 32476337 1793436 5542656..5543669 1 NC_005027.1 PMID: 10952301 best DB hits: BLAST: pir:A82318; conserved hypothetical protein VC0480 [imported] -; E=1e-37 swissprot:O52401; YGGB_EDWIC HYPOTHETICAL 30.6 KDA PROTEIN IN; E=2e-36 pir:B83096; conserved hypothetical protein PA4394 [imported] -; E=2e-31 COG: VC0480; COG0668 Small-conductance mechanosensitive channel; E=1e-38 HI0195.1; COG3264 Small-conductance mechanosensitive channel; E=2e-12 APE1441; COG0668 Small-conductance mechanosensitive channel; E=4e-12 PFAM: PF00924; Uncharacterized protein family UPF00; E=2.7e-52; mechanosensitive ion channel MscS 5543669 1793436 RB10255 Rhodopirellula baltica SH 1 mechanosensitive ion channel MscS NP_869331.1 5542656 D 243090 CDS NP_869332.1 32476338 1792905 5543753..5544559 1 NC_005027.1 hypothetical protein 5544559 1792905 RB10256 Rhodopirellula baltica SH 1 hypothetical protein NP_869332.1 5543753 D 243090 CDS NP_869333.1 32476339 1790571 5544584..5545453 1 NC_005027.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 5545453 surE 1790571 surE Rhodopirellula baltica SH 1 stationary phase survival protein SurE NP_869333.1 5544584 D 243090 CDS NP_869334.1 32476340 1797203 complement(5545719..5545964) 1 NC_005027.1 PMID: 9211896 best DB hits: BLAST: swissprot:Q9WY93; CSRA_THEMA CARBON STORAGE REGULATOR HOMOLOG; E=8e-08 swissprot:P44879; CSRA_HAEIN CARBON STORAGE REGULATOR HOMOLOG; E=1e-07 gb:AAK03372.1; (AE006168) CsrA [Pasteurella multocida]; E=2e-07 COG: TM0251; COG1551 Carbon storage regulator (could also regulate; E=1e-08 PFAM: PF02599; Carbon storage regulator; E=3.6e-16; CsrA_thema carbon storage regulator-like protein 5545964 csrA 1797203 csrA Rhodopirellula baltica SH 1 CsrA_thema carbon storage regulator-like protein NP_869334.1 5545719 R 243090 CDS NP_869335.1 32476341 1792037 complement(5546162..5546338) 1 NC_005027.1 hypothetical protein 5546338 1792037 RB10263 Rhodopirellula baltica SH 1 hypothetical protein NP_869335.1 5546162 R 243090 CDS NP_869336.1 32476342 1791626 complement(5546370..5547440) 1 NC_005027.1 PMID: 10360571 PMID: 9384377 best DB hits: BLAST: swissprot:Q9X013; E2B_THEMA TRANSLATION INITIATION FACTOR; E=4e-73 swissprot:O31662; E2B_BACSU TRANSLATION INITIATION FACTOR; E=1e-68 swissprot:P74497; E2B_SYNY3 TRANSLATION INITIATION FACTOR; E=4e-68 COG: TM0911; COG0182 Translation initiation factor eIF-2B alpha subunit; E=4e-74 aq_2114_2; COG0182 Translation initiation factor eIF-2B alpha; E=5e-59 PH0702; COG0182 Translation initiation factor eIF-2B alpha subunit; E=8e-58 PFAM: PF01144; Coenzyme A transferase; E=0.17 PF01008; Initiation factor 2 subunit family; E=3.7e-112; translation initiation factor eIF-2B 5547440 eIF-2B 1791626 eIF-2B Rhodopirellula baltica SH 1 translation initiation factor eIF-2B NP_869336.1 5546370 R 243090 CDS NP_869337.1 32476343 1794612 complement(5547471..5549033) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=7e-09 gb:AAC23913.1; (AF039207) NADH-dependent dehydrogenase homolog; E=3e-07 swissprot:Q54728; YJHC_STRPN HYPOTHETICAL PROTEIN IN NANB 3'REGION; E=5e-06 COG: BH1248; COG0673 Predicted dehydrogenases and related proteins; E=7e-10 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=4.4e-17; NADH-dependent dehydrogenase 5549033 1794612 RB10266 Rhodopirellula baltica SH 1 NADH-dependent dehydrogenase NP_869337.1 5547471 R 243090 CDS NP_869338.1 32476344 1795977 complement(5549332..5550216) 1 NC_005027.1 best DB hits: BLAST: embl:CAB61608.1; (AL133210) hypothetical protein SCG11A.27c; E=2e-48 embl:CAA98817.1; (Z74285) ORF YDL237w [Saccharomyces cerevisiae]; E=6e-09 gb:AAF40431.1; (AF234680) activity-dependent neuroprotective; E=0.80; secreted protein 5550216 1795977 RB10269 Rhodopirellula baltica SH 1 secreted protein NP_869338.1 5549332 R 243090 CDS NP_869339.1 32476345 1794770 complement(5550356..5551969) 1 NC_005027.1 PMID: 8467787 PMID: 7588751 PMID: 8021167 best DB hits: BLAST: pir:S43324; zeta-carotene desaturase - Anabaena sp. (strain PCC; E=2e-82 swissprot:Q02861; CRTI_MYXXA PHYTOENE DEHYDROGENASE (PHYTOENE; E=5e-78 pir:T31463; probable diapophytoene dehydrogenase crtN -; E=5e-67 COG: VNG1684G; COG1233 Phytoene dehydrogenase and related proteins; E=7e-60 PFAM: PF01266; D-amino acid oxidase; E=0.0003 PF01494; FAD binding domain; E=9.7e-07 PF01946; Thi4 family; E=0.0015; phytoene dehydrogenase 5551969 crtI 1794770 crtI Rhodopirellula baltica SH 1 phytoene dehydrogenase NP_869339.1 5550356 R 243090 CDS NP_869340.1 32476346 1791018 complement(5552071..5552547) 1 NC_005027.1 PMID: 1698262 PMID: 1311386 PMID: 6296074 best DB hits: BLAST: pdb:1RBR; Ribonuclease H (E.C.3.1.26.4) Mutant With His 62; E=1e-36 pdb:1RBT; Ribonuclease H (E.C.3.1.26.4) Mutant With Lys 95; E=2e-36 pdb:1RBV; Ribonuclease H (E.C.3.1.26.4) Mutant With Lys 95; E=9e-36 COG: rnhA; COG0328 Ribonuclease HI; E=1e-36 PFAM: PF00075; RNase H; E=9.5e-48; ribonuclease H 5552547 rnH 1791018 rnH Rhodopirellula baltica SH 1 ribonuclease H NP_869340.1 5552071 R 243090 CDS NP_869341.1 32476347 1793516 complement(5552651..5553475) 1 NC_005027.1 best DB hits: BLAST: pir:B82680; pteridine reductase 1 XF1457 [imported] - Xylella; E=4e-27 swissprot:P50161; VER1_ASPPA VERSICOLORIN REDUCTASE (VER-1); E=8e-23 swissprot:Q08632; SDR1_PICAB SHORT-CHAIN TYPE; E=9e-22 COG: XF1457; COG1028 Dehydrogenases with different specificities (related; E=4e-28 PAB1085; COG1028 Dehydrogenases with different specificities; E=1e-20 BH1511; COG1028 Dehydrogenases with different specificities (related; E=2e-19 PFAM: PF00106; short chain dehydrogenase; E=3.1e-32 PF00678; Short chain dehydrogenase/reduct; E=0.0013; pteridine reductase 1 5553475 1793516 RB10272 Rhodopirellula baltica SH 1 pteridine reductase 1 NP_869341.1 5552651 R 243090 CDS NP_869342.1 32476348 1794717 complement(5553477..5554556) 1 NC_005027.1 catalyzes the formation of biotin from dethiobiotin and sulfur 2 S-adenosyl-L-methionine; biotin synthase 5554556 bioB 1794717 bioB Rhodopirellula baltica SH 1 biotin synthase NP_869342.1 5553477 R 243090 CDS NP_869343.1 32476349 1790659 complement(5554594..5555310) 1 NC_005027.1 hypothetical protein 5555310 1790659 RB10276 Rhodopirellula baltica SH 1 hypothetical protein NP_869343.1 5554594 R 243090 CDS NP_869344.1 32476350 1790317 5555414..5556844 1 NC_005027.1 PMID: 9387221 best DB hits: BLAST: ddbj:BAB06882.1; (AP001517) pyruvate kinase [Bacillus halodurans]; E=4e-82 swissprot:P80885; KPYK_BACSU PYRUVATE KINASE (PK) (VEGETATIVE; E=6e-80 swissprot:P51181; KPYK_BACLI PYRUVATE KINASE (PK) ----- pir:; E=1e-79 COG: BH3163_1; COG0469 Pyruvate kinase; E=4e-83 PFAM: PF00478; IMP dehydrogenase / GMP reductase C; E=0.0006 PF00224; Pyruvate kinase, barrel domain; E=9.5e-124 PF02887; Pyruvate kinase, alpha/beta domain; E=1.3e-06; pyruvate kinase 5556844 pykA 1790317 pykA Rhodopirellula baltica SH 1 pyruvate kinase NP_869344.1 5555414 D 243090 CDS NP_869345.1 32476351 1790048 5557118..5557573 1 NC_005027.1 PMID: 1863771 PMID: 10452954 best DB hits: BLAST: pir:A75436; heat shock protein, HSP20 family - Deinococcus; E=3e-20 pir:F82582; low molecular weight heat shock protein XF2234; E=4e-16 pir:D72385; heat shock protein, class I - Thermotoga maritima; E=2e-15 COG: DR1114; COG0071 Molecular chaperone (small heat shock protein); E=3e-21 PFAM: PF00011; Hsp20/alpha crystallin family; E=3.8e-22; heat shock protein 20 5557573 hsp20 1790048 hsp20 Rhodopirellula baltica SH 1 heat shock protein 20 NP_869345.1 5557118 D 243090 CDS NP_869346.1 32476352 1791888 5557737..5558060 1 NC_005027.1 PMID: 8423161 PMID: 8226695 best DB hits: BLAST: pir:F82582; low molecular weight heat shock protein XF2234; E=1e-11 swissprot:Q06823; SP21_STIAU SPORE PROTEIN SP21 ----- pir:; E=3e-11 embl:CAB99442.1; (AJ276218) HspA protein [Stigmatella aurantiaca]; E=3e-11 COG: XF2234; COG0071 Molecular chaperone (small heat shock protein); E=1e-12 PFAM: PF00011; Hsp20/alpha crystallin family; E=1.1e-20; heat shock protein SP21 5558060 hsp20 1791888 hsp20 Rhodopirellula baltica SH 1 heat shock protein SP21 NP_869346.1 5557737 D 243090 CDS NP_869347.1 32476353 1796978 complement(5558011..5558157) 1 NC_005027.1 hypothetical protein 5558157 1796978 RB10286 Rhodopirellula baltica SH 1 hypothetical protein NP_869347.1 5558011 R 243090 CDS NP_869348.1 32476354 1796174 complement(5558161..5559072) 1 NC_005027.1 PMID: 11481431 best DB hits: BLAST: pir:T36903; probable dihydropicolinate synthase - Streptomyces; E=0.41 gb:AAG18989.1; (AE004999) dihydrodipicolinate synthase; DapA; E=0.42; dihydropicolinate synthase 5559072 1796174 RB10287 Rhodopirellula baltica SH 1 dihydropicolinate synthase NP_869348.1 5558161 R 243090 CDS NP_869349.1 32476355 1797144 complement(5559203..5559631) 1 NC_005027.1 hypothetical protein 5559631 1797144 RB10290 Rhodopirellula baltica SH 1 hypothetical protein NP_869349.1 5559203 R 243090 CDS NP_869350.1 32476356 1794776 5559646..5561391 1 NC_005027.1 PMID: 10656583; signal peptide 5561391 1794776 RB10292 Rhodopirellula baltica SH 1 signal peptide NP_869350.1 5559646 D 243090 CDS NP_869351.1 32476357 1797143 complement(5561501..5562427) 1 NC_005027.1 PMID: 8144463 PMID: 9765566 PMID: 11297742 best DB hits: BLAST: swissprot:P55818; MTDA_METEX METHYLENETETRAHYDROFOLATE; E=2e-53 gb:AAD55895.1; AF139593_2 (AF139593) methylene; E=2e-18 gb:AAC27020.1; (AF032114) methylene tetrahydromethanopterin; E=3e-16 PFAM: PF02254; KTN NAD-binding domain; E=0.021 PF00106; short chain dehydrogenase; E=0.00046; MtdA bifunctional protein 5562427 mtdA 1797143 mtdA Rhodopirellula baltica SH 1 MtdA bifunctional protein NP_869351.1 5561501 R 243090 CDS NP_869352.1 32476358 1797097 complement(5562491..5563081) 1 NC_005027.1 best DB hits: BLAST: gb:AAB89943.1; (AE001014) D-arabino 3-hexulose 6-phosphate; E=4e-41 pir:D69063; conserved hypothetical protein MTH1474 -; E=2e-40 gb:AAG32954.1; (AF032114) formaldehyde-activating enzyme; E=1e-37 COG: AF1305_1; COG1795 Uncharacterized archaeal domain; E=4e-42; D-arabino 3-hexulose 6-phosphate formaldehyde lyase (hps-2) 5563081 fae 1797097 fae Rhodopirellula baltica SH 1 D-arabino 3-hexulose 6-phosphate formaldehyde lyase (hps-2) NP_869352.1 5562491 R 243090 CDS NP_869353.1 32476359 1796108 5563036..5564403 1 NC_005027.1 PMID: 9651254 PMID: 10215859 PMID: 10848995 PMID: 11073907 best DB hits: BLAST: gb:AAC27021.1; (AF032114) unknown [Methylobacterium extorquens]; E=0.029 embl:CAB92281.1; (AL356595) hypothetical protein [Streptomyces; E=0.43 pir:C83094; D-alanine--D-alanine ligase PA4410 [imported] -; E=0.62 PFAM: PF00826; Ribosomal L10; E=0.66; hypothetical protein 5564403 1796108 RB10299 Rhodopirellula baltica SH 1 hypothetical protein NP_869353.1 5563036 D 243090 CDS NP_869354.1 32476360 1797142 complement(5564392..5567523) 1 NC_005027.1 best DB hits: BLAST: gb:AAG19252.1; (AE005021) plastocyanin homology; Pcy; E=0.67; signal peptide 5567523 1797142 RB10300 Rhodopirellula baltica SH 1 signal peptide NP_869354.1 5564392 R 243090 CDS NP_869355.1 32476361 1797141 5567639..5567959 1 NC_005027.1 PMID: 11474104; hypothetical protein 5567959 1797141 RB10305 Rhodopirellula baltica SH 1 hypothetical protein NP_869355.1 5567639 D 243090 CDS NP_869356.1 32476362 1797140 5568000..5569049 1 NC_005027.1 PMID: 9464392 best DB hits: BLAST: pir:T03500; hypothetical protein - Rhodobacter capsulatus -----; E=1e-70 ddbj:BAA24794.1; (AB001577) low specificity L-threonine aldolase; E=5e-61 gb:AAD42401.1; AF157493_9 (AF157493) low specificity L-threonine; E=2e-59 COG: PA5413; COG2008 Threonine aldolase; E=9e-59; low specificity L-threonine aldolase 5569049 gly1 1797140 gly1 Rhodopirellula baltica SH 1 low specificity L-threonine aldolase NP_869356.1 5568000 D 243090 CDS NP_869357.1 32476363 1797139 5569131..5570057 1 NC_005027.1 PMID: 9823893 PMID: 10984043 best DB hits: BLAST: pir:A71678; probable response regulatory protein RP237 - Rickettsia; E=2e-21 pir:A82428; sensory boxGGDEF family protein VCA0697 [imported] -; E=6e-21 pir:E83183; probable two-component response regulator PA3702; E=1e-20 COG: VCA0697_3; COG2199 Diguanylate cyclase/phosphodiesterase domain 1; E=6e-22 PFAM: PF00072; Response regulator receiver doma; E=5.4e-17 PF00990; GGDEF domain; E=7.2e-44; response regulatory protein 5570057 1797139 RB10308 Rhodopirellula baltica SH 1 response regulatory protein NP_869357.1 5569131 D 243090 CDS NP_869358.1 32476364 1797138 complement(5570064..5571518) 1 NC_005027.1 PMID: 9647823 PMID: 9076741 best DB hits: BLAST: ddbj:BAA31873.1; (AB009593) xylose transporter [Tetragenococcus; E=1e-67 embl:CAA96096.1; (Z71474) xylose permease [Bacillus megaterium]; E=5e-60 swissprot:P09098; XYLE_ECOLI D-XYLOSE-PROTON SYMPORTER (D-XYLOSE; E=2e-57 COG: xylE; COG0477 Permeases of the major facilitator superfamily; E=2e-58 PFAM: PF00083; Sugar (and other) transporter; E=1.2e-118; xylose transporter 5571518 xylE 1797138 xylE Rhodopirellula baltica SH 1 xylose transporter NP_869358.1 5570064 R 243090 CDS NP_869359.1 32476365 1797137 complement(5571523..5572980) 1 NC_005027.1 PMID: 7690854 best DB hits: BLAST: pir:H81796; NADH dehydrogenase (ubiquinone) (EC 1.6.5.3) chain M; E=1e-15 pir:E81220; NADH dehydrogenase I, M chain NMB0258 [imported] -; E=4e-15 swissprot:Q9ZCG0; NUOM_RICPR NADH DEHYDROGENASE I CHAIN M; E=3e-14 COG: NMB0258; COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); E=4e-16 PH1431; COG0651 Formate hydrogenlyase subunit 3; E=6e-13 HP1272; COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); E=3e-12 PFAM: PF00361; NADH-Ubiquinone/plastoquinone (co; E=2e-07; NADH dehydrogenase (ubiquinone) chain M 5572980 nuoM 1797137 nuoM Rhodopirellula baltica SH 1 NADH dehydrogenase (ubiquinone) chain M NP_869359.1 5571523 R 243090 CDS NP_869360.1 32476366 1797136 complement(5572993..5574402) 1 NC_005027.1 PMID: 3035337 best DB hits: BLAST: gb:AAG09461.1; AF217811_11 (AF217811) NADH subunit 5 [Tupaia; E=3e-29 swissprot:P50368; NU5M_SCHCO NADH-UBIQUINONE OXIDOREDUCTASE CHAIN; E=4e-29 embl:CAA50887.1; (X72004) NADH-ubiquinone oxidoreductase subunit; E=1e-28 COG: slr0844; COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L); E=3e-29 PAB1402; COG0651 Formate hydrogenlyase subunit 3; E=4e-17 sll1732; COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L); E=1e-16 PFAM: PF00662; NADH-Ubiquinone oxidoreductase; E=0.41 PF00361; NADH-Ubiquinone/plastoquinone (; E=1.2e-36; NADH subunit 5 5574402 ndhF 1797136 ndhF Rhodopirellula baltica SH 1 NADH subunit 5 NP_869360.1 5572993 R 243090 CDS NP_869361.1 32476367 1797130 complement(5574399..5577620) 1 NC_005027.1 PMID: 9537320 best DB hits: BLAST: pir:G70374; hypothetical protein aq_863 - Aquifex aeolicus -----; E=6e-49 pir:H82182; conserved hypothetical protein VC1582 [imported] - Vibrio; E=8e-46 pir:E69745; hypothetical protein ybcD - Bacillus subtilis -----; E=1e-39 COG: aq_863; COG3002 Uncharacterized BCR; E=6e-50 PFAM: PF02873; UDP-N-acetylenolpyruvoylglucosamine; E=0.038; hypothetical protein 5577620 1797130 RB10314 Rhodopirellula baltica SH 1 hypothetical protein NP_869361.1 5574399 R 243090 CDS NP_869362.1 32476368 1797129 5577574..5577771 1 NC_005027.1 hypothetical protein 5577771 1797129 RB10319 Rhodopirellula baltica SH 1 hypothetical protein NP_869362.1 5577574 D 243090 CDS NP_869363.1 32476369 1797133 5577911..5579290 1 NC_005027.1 PMID: 10086841 PMID: 10086842 PMID: 10192928 best DB hits: BLAST: ddbj:BAB05639.1; (AP001513) two-component sensor histidine kinase; E=5e-22 swissprot:Q06067; ATOS_ECOLI SENSOR PROTEIN ATOS ----- pir:; E=1e-21 pir:S70528; sensor protein pilS - Myxococcus xanthus ----- gb:; E=2e-21 COG: BH1920; COG0642 Sensory transduction histidine kinases; E=5e-23 PFAM: PF00785; PAC motif; E=0.099 PF00512; His Kinase A (phosphoacceptor) doma; E=7.9e-10 PF02518; Histidine kinase-, DNA gyrase B-, p; E=1.1e-33; two-component sensor histidine kinase 5579290 1797133 RB10322 Rhodopirellula baltica SH 1 two-component sensor histidine kinase NP_869363.1 5577911 D 243090 CDS NP_869364.1 32476370 1797132 5579287..5580654 1 NC_005027.1 PMID: 9278503 PMID: 9097040 PMID: 8346225 best DB hits: BLAST: swissprot:Q06065; ATOC_ECOLI ACETOACETATE METABOLISM REGULATORY; E=6e-93 pir:F71315; probable response regulatory protein (atoC) - syphilis; E=7e-93 gb:AAF33506.1; (AF170176) Salmonella typhimurium transcriptional; E=3e-89 COG: atoC; COG2204 AAA superfamily ATPases with N-terminal receiver; E=5e-94 PFAM: PF00072; Response regulator receiver doma; E=1.5e-34 PF00158; Sigma-54 interaction domain; E=1.2e-133; acetoacetate metabolism regulatory protein atoC 5580654 atoC 1797132 atoC Rhodopirellula baltica SH 1 acetoacetate metabolism regulatory protein atoC NP_869364.1 5579287 D 243090 CDS NP_869365.1 32476371 1797083 5580658..5580846 1 NC_005027.1 hypothetical protein 5580846 1797083 RB10324 Rhodopirellula baltica SH 1 hypothetical protein NP_869365.1 5580658 D 243090 CDS NP_869366.1 32476372 1797131 5580833..5582599 1 NC_005027.1 best DB hits: BLAST: pir:D83631; probable sulfate transporter PA0103 [imported] -; E=6e-41 pir:B70979; hypothetical protein Rv3273 - Mycobacterium tuberculosis; E=2e-37 pir:T36683; probable integral membrane protein - Streptomyces; E=7e-31 COG: PA0103; COG0659 Sulfate permease and related transporters (MFS; E=6e-42 PFAM: PF00916; Sulfate transporter family; E=5.9e-11; sulfate transporter 5582599 1797131 RB10326 Rhodopirellula baltica SH 1 sulfate transporter NP_869366.1 5580833 D 243090 CDS NP_869367.1 32476373 1797098 5582627..5583010 1 NC_005027.1 best DB hits: BLAST: swissprot:O26118; SUI1_METTH PROTEIN TRANSLATION FACTOR SUI1; E=2e-09 swissprot:Q57902; SUI1_METJA PROTEIN TRANSLATION FACTOR SUI1; E=5e-09 pir:H72542; hypothetical protein APE1629 - Aeropyrum pernix (strain; E=7e-09 COG: MTH10; COG0023 Translation initiation factor (SUI1); E=2e-10 PFAM: PF01253; Translation initiation factor SUI1; E=1.8e-12; protein translation factor SUI1-like protein 5583010 sui1 1797098 sui1 Rhodopirellula baltica SH 1 protein translation factor SUI1-like protein NP_869367.1 5582627 D 243090 CDS NP_869368.1 32476374 1797125 complement(5582992..5583675) 1 NC_005027.1 PMID: 10567266 PMID: 10086841 best DB hits: BLAST: pir:H75538; conserved hypothetical protein - Deinococcus radiodurans; E=1e-17 ddbj:BAB05098.1; (AP001511) BH1379~unknown conserved protein; E=4e-13 swissprot:P54471; YQFN_BACSU HYPOTHETICAL 23.7 KD PROTEIN IN; E=3e-12 COG: DR0276; COG2384 Predicted SAM-dependent methyltransferase; E=1e-18; SAM-dependent methyltransferase 5583675 1797125 RB10328 Rhodopirellula baltica SH 1 SAM-dependent methyltransferase NP_869368.1 5582992 R 243090 CDS NP_869369.1 32476375 1797124 complement(5583682..5584935) 1 NC_005027.1 best DB hits: BLAST: pir:T36501; probable serinethreonine protein kinase - Streptomyces; E=2e-32 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=4e-32 swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=5e-31 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=4e-33 PA5360; COG0745 Response regulators consisting of a CheY-like; E=9e-17 VC0622_4; COG0784 CheY-like receiver domains; E=2e-16 PFAM: PF00072; Response regulator receiver doma; E=6e-29 PF00069; Protein kinase domain; E=6.7e-52; serine/threonine protein kinase 5584935 1797124 RB10329 Rhodopirellula baltica SH 1 serine/threonine protein kinase NP_869369.1 5583682 R 243090 CDS NP_869370.1 32476376 1797145 complement(5584932..5587514) 1 NC_005027.1 best DB hits: BLAST: pir:S75136; sensory transduction histidine kinase slr2104 -; E=3e-69 pir:E83443; probable sensorresponse regulator hybrid PA1611; E=2e-56 pir:H83132; probable sensorresponse regulator hybrid PA4112; E=1e-52 COG: PA4982; COG0642 Sensory transduction histidine kinases; E=4e-49 PFAM: PF00512; His Kinase A (phosphoacceptor) d; E=1.3e-22 PF02518; Histidine kinase-, DNA gyrase B-; E=8e-46 PF00072; Response regulator receiver doma; E=6.2e-33; sensory transduction histidine kinase 5587514 1797145 RB10330 Rhodopirellula baltica SH 1 sensory transduction histidine kinase NP_869370.1 5584932 R 243090 CDS NP_869371.1 32476377 1797096 complement(5587518..5587892) 1 NC_005027.1 hypothetical protein 5587892 1797096 RB10332 Rhodopirellula baltica SH 1 hypothetical protein NP_869371.1 5587518 R 243090 CDS NP_869372.1 32476378 1790245 complement(5587906..5589567) 1 NC_005027.1 best DB hits: BLAST: pir:T42076; protein kinase homolog - Streptomyces coelicolor -----; E=5e-18 pir:T42077; protein kinase homolog - Streptomyces coelicolor -----; E=1e-16 pir:T35491; probable serinethreonine-specific protein kinase pkaF -; E=1e-16 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=3e-15 PFAM: PF00069; Protein kinase domain; E=3.2e-06; protein kinase-like protein 5589567 1790245 RB10333 Rhodopirellula baltica SH 1 protein kinase-like protein NP_869372.1 5587906 R 243090 CDS NP_869373.1 32476379 1792561 complement(5589648..5590382) 1 NC_005027.1 PMID: 9882662 best DB hits: BLAST: swissprot:O31751; UPPS_BACSU UNDECAPRENYL PYROPHOSPHATE SYNTHETASE; E=4e-51 pir:F82099; undecaprenyl diphosphate synthase VC2256 [imported] -; E=3e-50 gb:AAB08603.1; (U70214) hypothetical protein [Escherichia coli]; E=3e-50 COG: BS_yluA; COG0020 Undecaprenyl pyrophosphate synthase; E=4e-52 PFAM: PF01255; undecaprenyl diphosph; E=2.1e-100; undecaprenyl pyrophosphate synthetase 5590382 uppS 1792561 uppS Rhodopirellula baltica SH 1 undecaprenyl pyrophosphate synthetase NP_869373.1 5589648 R 243090 CDS NP_869374.1 32476380 1793449 complement(5590379..5591839) 1 NC_005027.1 PMID: 9748431 PMID: 1699845 best DB hits: BLAST: swissprot:P21296; FLBA_CAUCR FLBA PROTEIN ----- gb: AAC62523.1; E=2e-19 swissprot:P56558; OGT1_RAT UDP-N-ACETYLGLUCOSAMINE--PEPTIDE; E=5e-11 embl:CAA76834.1; (Y17720) SPINDLY protein [Petunia x hybrida]; E=8e-11 COG: aq_2197; COG0457 TPR-repeat-containing proteins; E=2e-09 PFAM: PF00515; TPR Domain; E=5.6e-07; FlbA protein 5591839 flbA 1793449 flbA Rhodopirellula baltica SH 1 FlbA protein NP_869374.1 5590379 R 243090 CDS NP_869375.1 32476381 1794158 complement(5591839..5593398) 1 NC_005027.1 PMID: 2110143 best DB hits: BLAST: swissprot:P56835; RPSD_CHLMU RNA POLYMERASE SIGMA FACTOR RPOD; E=5e-80 swissprot:P18333; RPSD_CHLTR RNA POLYMERASE SIGMA FACTOR RPOD; E=6e-80 pir:RNCW7H; transcription initiation factor sigma 70 - Chlamydia; E=6e-80 COG: CT615; COG0568 DNA-directed RNA polymerase sigma subunits; E=6e-81 PFAM: PF00140; Sigma-70 factor; E=6.7e-109; RNA polymerase sigma factor rpoD 5593398 rpdD 1794158 rpdD Rhodopirellula baltica SH 1 RNA polymerase sigma factor rpoD NP_869375.1 5591839 R 243090 CDS NP_869376.1 32476382 1793527 5593416..5593601 1 NC_005027.1 hypothetical protein 5593601 1793527 RB10341 Rhodopirellula baltica SH 1 hypothetical protein NP_869376.1 5593416 D 243090 CDS NP_869377.1 32476383 1796761 complement(5593621..5593929) 1 NC_005027.1 hypothetical protein 5593929 1796761 RB10342 Rhodopirellula baltica SH 1 hypothetical protein NP_869377.1 5593621 R 243090 CDS NP_869378.1 32476384 1795327 5593898..5594059 1 NC_005027.1 hypothetical protein 5594059 1795327 RB10343 Rhodopirellula baltica SH 1 hypothetical protein NP_869378.1 5593898 D 243090 CDS NP_869379.1 32476385 1796822 5594195..5594752 1 NC_005027.1 hypothetical protein 5594752 1796822 RB10344 Rhodopirellula baltica SH 1 hypothetical protein NP_869379.1 5594195 D 243090 CDS NP_869380.1 32476386 1790523 5594718..5594879 1 NC_005027.1 hypothetical protein 5594879 1790523 RB10345 Rhodopirellula baltica SH 1 hypothetical protein NP_869380.1 5594718 D 243090 CDS NP_869381.1 32476387 1793564 complement(5594855..5595682) 1 NC_005027.1 best DB hits: BLAST: gb:AAK04327.1; AE006260_10 (AE006260) HYPOTHETICAL PROTEIN; E=0.003 gb:AAC68678.1; (AF079762) N,N-dimethyltransferase [Streptomyces; E=0.052 pir:G75136; menaquinone biosynthesis methlytransferase related; E=0.13; N,N-dimethyltransferase 5595682 1793564 RB10346 Rhodopirellula baltica SH 1 N,N-dimethyltransferase NP_869381.1 5594855 R 243090 CDS NP_869382.1 32476388 1793469 complement(5595704..5596258) 1 NC_005027.1 hypothetical protein 5596258 1793469 RB10347 Rhodopirellula baltica SH 1 hypothetical protein NP_869382.1 5595704 R 243090 CDS NP_869383.1 32476389 1790393 complement(5596387..5596878) 1 NC_005027.1 best DB hits: BLAST: pir:H82154; conserved hypothetical protein VC1812 [imported] -; E=6e-04 gb:AAF87148.1; AC002423_13 (AC002423) T23E23.25 [Arabidopsis; E=0.20 COG: VC1812; COG3011 Uncharacterized BCR; E=6e-05; hypothetical protein 5596878 1790393 RB10350 Rhodopirellula baltica SH 1 hypothetical protein NP_869383.1 5596387 R 243090 CDS NP_869384.1 32476390 1795295 5597086..5598849 1 NC_005027.1 hypothetical protein 5598849 1795295 RB10354 Rhodopirellula baltica SH 1 hypothetical protein NP_869384.1 5597086 D 243090 CDS NP_869385.1 32476391 1790078 5598846..5599451 1 NC_005027.1 hypothetical protein 5599451 1790078 RB10357 Rhodopirellula baltica SH 1 hypothetical protein NP_869385.1 5598846 D 243090 CDS NP_869386.1 32476392 1792049 complement(5599427..5600203) 1 NC_005027.1 hypothetical protein 5600203 1792049 RB10358 Rhodopirellula baltica SH 1 hypothetical protein NP_869386.1 5599427 R 243090 CDS NP_869387.1 32476393 1793289 5600459..5601301 1 NC_005027.1 best DB hits: BLAST: pir:F83592; conserved hypothetical protein PA0419 [imported] -; E=2e-13 gb:AAK03952.1; (AE006224) unknown [Pasteurella multocida]; E=4e-12 pir:A65080; hypothetical protein in endA-gshB intergenic region -; E=1e-10 COG: PA0419; COG1385 Uncharacterized BCR; E=2e-14; hypothetical protein 5601301 1793289 RB10359 Rhodopirellula baltica SH 1 hypothetical protein NP_869387.1 5600459 D 243090 CDS NP_869388.1 32476394 1796106 5601276..5601440 1 NC_005027.1 hypothetical protein 5601440 1796106 RB10361 Rhodopirellula baltica SH 1 hypothetical protein NP_869388.1 5601276 D 243090 CDS NP_869389.1 32476395 1792299 5601298..5601540 1 NC_005027.1 hypothetical protein 5601540 1792299 RB10362 Rhodopirellula baltica SH 1 hypothetical protein NP_869389.1 5601298 D 243090 CDS NP_869390.1 32476396 1792824 5601572..5602762 1 NC_005027.1 best DB hits: BLAST: pir:H69181; hypothetical protein MTH616 - Methanobacterium; E=5e-30 pir:H69125; hypothetical protein MTH210 - Methanobacterium; E=2e-29 gb:AAC48226.1; (AF006826) N-ethylmaleimide-sensitive fusion; E=0.21 COG: MTH616; COG0606 Predicted ATPases; E=5e-31 PFAM: PF00004; ATPase associated with variou; E=1.9e-06 PF01202; Shikimate kinase; E=0.31; ATPase with chaperone activity 5602762 1792824 RB10364 Rhodopirellula baltica SH 1 ATPase with chaperone activity NP_869390.1 5601572 D 243090 CDS NP_869391.1 32476397 1790899 5602851..5606144 1 NC_005027.1 best DB hits: BLAST: pir:C70986; probable serinethreonine protein kinase (EC 2.7.1.-) -; E=1e-17 embl:CAB66178.1; (AL136500) probable serinethreonine protein; E=1e-15 swissprot:Q10697; PKNJ_MYCTU PROBABLE SERINETHREONINE-PROTEIN; E=6e-15 COG: Rv1746; COG0515 Serine/threonine protein kinases; E=1e-18 PFAM: PF00069; Protein kinase domain; E=3.8e-28; serine/threonine protein kinase 5606144 1790899 RB10367 Rhodopirellula baltica SH 1 serine/threonine protein kinase NP_869391.1 5602851 D 243090 CDS NP_869392.1 32476398 1791399 complement(5606187..5606867) 1 NC_005027.1 PMID: 8969498 best DB hits: BLAST: swissprot:P54607; YHCW_BACSU HYPOTHETICAL 24.7 KD PROTEIN IN; E=6e-15 ref:XP_010289.2; DNA segment, numerous copies, expressed probes; E=9e-14 gb:AAA58622.1; (M86934) Gene from Xp22.3 which escapes; E=4e-13 COG: BS_yhcW; COG0637 Predicted phosphatase/phosphohexomutase; E=6e-16 gph; COG0546 Predicted phosphatases; E=6e-08 PA2067; COG0637 Predicted phosphatase/phosphohexomutase; E=8e-08 PFAM: PF00702; haloacid dehalogenase-like hydrolas; E=2.1e-26; phosphatase 5606867 1791399 RB10370 Rhodopirellula baltica SH 1 phosphatase NP_869392.1 5606187 R 243090 CDS NP_869393.1 32476399 1792638 complement(5606864..5609191) 1 NC_005027.1 PMID: 10688204 best DB hits: BLAST: pir:B81282; probable integral membrane protein Cj1373 [imported] -; E=5e-09 COG: Cj1373; COG1033 Membrane proteins related to SecD/SecF; E=5e-10; hypothetical protein 5609191 1792638 RB10372 Rhodopirellula baltica SH 1 hypothetical protein NP_869393.1 5606864 R 243090 CDS NP_869394.1 32476400 1793690 complement(5609188..5609916) 1 NC_005027.1 PMID: 10984043 PMID: 2121716 best DB hits: BLAST: pir:A83077; prolipoprotein signal peptidase PA4559 [imported] -; E=3e-05 swissprot:P17942; LSPA_PSEFL LIPOPROTEIN SIGNAL PEPTIDASE; E=3e-04 embl:CAA11250.1; (AJ223309) SPase II [Myxococcus xanthus]; E=5e-04 COG: PA4559; COG0597 Lipoprotein signal peptidase; E=3e-06 PFAM: PF01252; Signal peptidase (SPase) II; E=0.043; prolipoprotein signal peptidase 5609916 lspA 1793690 lspA Rhodopirellula baltica SH 1 prolipoprotein signal peptidase NP_869394.1 5609188 R 243090 CDS NP_869395.1 32476401 1794395 complement(5610063..5610497) 1 NC_005027.1 PMID: 2137818 PMID: 3280308 best DB hits: BLAST: swissprot:P08058; THIO_RHOSH THIOREDOXIN (TRX) ----- pir:; E=8e-17 swissprot:P43785; THIO_HAEIN THIOREDOXIN (TRX) ----- pir:; E=2e-14 swissprot:P00275; THI1_CORNE THIOREDOXIN C-1 ----- pir: TXFK; E=1e-13 COG: HI0084; COG0526 Thiol-disulfide isomerase and thioredoxins; E=2e-15 XF2174; COG3118 Thioredoxin domain-containing protein; E=2e-10 PA5240; COG0526 Thiol-disulfide isomerase and thioredoxins; E=2e-10 PFAM: PF00085; Thioredoxin; E=1.1e-24; thioredoxin 5610497 trxA 1794395 trxA Rhodopirellula baltica SH 1 thioredoxin NP_869395.1 5610063 R 243090 CDS NP_869396.1 32476402 1790208 complement(5610680..5611582) 1 NC_005027.1 hypothetical protein 5611582 1790208 RB10380 Rhodopirellula baltica SH 1 hypothetical protein NP_869396.1 5610680 R 243090 CDS NP_869397.1 32476403 1795386 complement(5611884..5612174) 1 NC_005027.1 hypothetical protein 5612174 1795386 RB10384 Rhodopirellula baltica SH 1 hypothetical protein NP_869397.1 5611884 R 243090 CDS NP_869398.1 32476404 1793379 complement(5612201..5612452) 1 NC_005027.1 hypothetical protein 5612452 1793379 RB10385 Rhodopirellula baltica SH 1 hypothetical protein NP_869398.1 5612201 R 243090 CDS NP_869399.1 32476405 1794869 5612453..5613286 1 NC_005027.1 best DB hits: PFAM: PF01090; Ribosomal protein S19e; E=0.077; signal peptide 5613286 1794869 RB10386 Rhodopirellula baltica SH 1 signal peptide NP_869399.1 5612453 D 243090 CDS NP_869400.1 32476406 1795293 5613357..5615438 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=4e-28 pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=1e-27 embl:CAA73979.1; (Y13639) protein kinase [Staphylococcus aureus]; E=5e-27 COG: BH2504_1; COG0515 Serine/threonine protein kinases; E=3e-29 PFAM: PF00069; Protein kinase domain; E=4.6e-52; serine/threonine protein kinase 5615438 1795293 RB10388 Rhodopirellula baltica SH 1 serine/threonine protein kinase NP_869400.1 5613357 D 243090 CDS NP_869401.1 32476407 1793133 5615419..5616087 1 NC_005027.1 hypothetical protein 5616087 1793133 RB10391 Rhodopirellula baltica SH 1 hypothetical protein NP_869401.1 5615419 D 243090 CDS NP_869402.1 32476408 1794647 complement(5616195..5619110) 1 NC_005027.1 best DB hits: BLAST: embl:CAC20842.1; (AJ250467) receptor protein kinase [Pinus; E=6e-04 pir:T10659; probable serinethreonine-specific protein kinase (EC; E=0.019 embl:CAB95344.1; (AL359782) possible adenylate cyclase; E=0.081; receptor protein kinase 5619110 upK 1794647 upK Rhodopirellula baltica SH 1 receptor protein kinase NP_869402.1 5616195 R 243090 CDS NP_869403.1 32476409 1794371 complement(5619254..5620012) 1 NC_005027.1 PMID: 10074426 best DB hits: BLAST: ddbj:BAA91571.1; (AK001235) unnamed protein product [Homo; E=3e-51 gb:AAD17300.1; (AF125181) single-strand selective monofunctional; E=1e-50 gb:AAF55400.1; (AE003716) CG5285 gene product [Drosophila; E=5e-33; single-strand selective monofunctional uracil DNA glycosylase 5620012 smuG1 1794371 smuG1 Rhodopirellula baltica SH 1 single-strand selective monofunctional uracil DNA glycosylase NP_869403.1 5619254 R 243090 CDS NP_869404.1 32476410 1794636 complement(5620009..5620857) 1 NC_005027.1 membrane associated protein 5620857 1794636 RB10396 Rhodopirellula baltica SH 1 membrane associated protein NP_869404.1 5620009 R 243090 CDS NP_869405.1 32476411 1793378 complement(5620781..5621725) 1 NC_005027.1 hypothetical protein 5621725 1793378 RB10397 Rhodopirellula baltica SH 1 hypothetical protein NP_869405.1 5620781 R 243090 CDS NP_869406.1 32476412 1794286 5621773..5623224 1 NC_005027.1 best DB hits: BLAST: gb:AAB89578.1; (AE000988) coenzyme F390 synthetase (ftsA-2); E=6e-37 pir:A69082; coenzyme F390 synthetase III - Methanobacterium; E=2e-36 pir:B69115; coenzyme F390 synthetase II - Methanobacterium; E=7e-36 COG: AF1671; COG1541 Coenzyme F390 synthetase; E=6e-38; coenzyme F390 synthetase (ftsA-2) 5623224 ftsA 1794286 ftsA Rhodopirellula baltica SH 1 coenzyme F390 synthetase (ftsA-2) NP_869406.1 5621773 D 243090 CDS NP_869407.1 32476413 1790932 complement(5623215..5623460) 1 NC_005027.1 hypothetical protein 5623460 1790932 RB10399 Rhodopirellula baltica SH 1 hypothetical protein NP_869407.1 5623215 R 243090 CDS NP_869408.1 32476414 1795542 5623435..5625792 1 NC_005027.1 PMID: 8606192 PMID: 9045821 best DB hits: BLAST: gb:AAB49431.1; (U73374) Cap8B [Staphylococcus aureus]; E=6e-19 gb:AAC46085.1; (U81973) Cap5B [Staphylococcus aureus]; E=1e-18 ddbj:BAB07387.1; (AP001519) capsular polysaccharide biosynthesis; E=2e-18 COG: BH3668; COG0489 ATPases involved in chromosome partitioning; E=2e-19 MJ0547; COG0455 ATPases involved in chromosome partitioning; E=1e-04 PFAM: PF00142; 4Fe-4S iron sulfur cluster bindin; E=0.68; type 8 capsule gene Cap8B 5625792 1795542 RB10401 Rhodopirellula baltica SH 1 type 8 capsule gene Cap8B NP_869408.1 5623435 D 243090 CDS NP_869409.1 32476415 1794625 complement(5625926..5627350) 1 NC_005027.1 best DB hits: BLAST: pir:F70345; polysaccharide biosynthesis protein - Aquifex aeolicus; E=0.16; polysaccharide biosynthesis protein 5627350 1794625 RB10404 Rhodopirellula baltica SH 1 polysaccharide biosynthesis protein NP_869409.1 5625926 R 243090 CDS NP_869410.1 32476416 1792038 complement(5627316..5628203) 1 NC_005027.1 signal peptide 5628203 1792038 RB10406 Rhodopirellula baltica SH 1 signal peptide NP_869410.1 5627316 R 243090 CDS NP_869411.1 32476417 1793201 5628235..5628600 1 NC_005027.1 hypothetical protein 5628600 1793201 RB10409 Rhodopirellula baltica SH 1 hypothetical protein NP_869411.1 5628235 D 243090 CDS NP_869412.1 32476418 1796813 5628807..5630213 1 NC_005027.1 hypothetical protein 5630213 1796813 RB10410 Rhodopirellula baltica SH 1 hypothetical protein NP_869412.1 5628807 D 243090 CDS NP_869413.1 32476419 1793592 5630210..5630386 1 NC_005027.1 hypothetical protein 5630386 1793592 RB10412 Rhodopirellula baltica SH 1 hypothetical protein NP_869413.1 5630210 D 243090 CDS NP_869414.1 32476420 1792832 complement(5630383..5634441) 1 NC_005027.1 best DB hits: BLAST: gb:AAB89163.1; (AE000959) conserved hypothetical protein; E=6e-09 PFAM: PF00082; Subtilase; E=5e-12; hypothetical protein 5634441 1792832 RB10413 Rhodopirellula baltica SH 1 hypothetical protein NP_869414.1 5630383 R 243090 CDS NP_869415.1 32476421 1793051 5634693..5639387 1 NC_005027.1 PMID: 9294005 best DB hits: BLAST: embl:CAA72323.1; (Y11564) xylanase [Rhodothermus marinus]; E=2e-06 embl:CAA60868.1; (X87417) xylanase [Rhodothermus marinus]; E=2e-06 pir:B72423; endo-1,4-beta-xylanase B - Thermotoga maritima (strain; E=4e-06 COG: sll0656_1; COG3204 Uncharacterized BCR; E=6e-06 XF0845; COG1472 Beta-glucosidase-related glycosidases; E=0.008 PFAM: PF00404; Dockerin type I repeat; E=0.49 PF02369; Bacterial Ig-like domain (group 1); E=0.16; xylanase 5639387 xynB 1793051 xynB Rhodopirellula baltica SH 1 xylanase NP_869415.1 5634693 D 243090 CDS NP_869416.1 32476422 1790422 complement(5639384..5639506) 1 NC_005027.1 hypothetical protein 5639506 1790422 RB10419 Rhodopirellula baltica SH 1 hypothetical protein NP_869416.1 5639384 R 243090 CDS NP_869417.1 32476423 1790212 5639547..5640638 1 NC_005027.1 hypothetical protein 5640638 1790212 RB10420 Rhodopirellula baltica SH 1 hypothetical protein NP_869417.1 5639547 D 243090 CDS NP_869418.1 32476424 1790490 5640680..5646919 1 NC_005027.1 PMID: 9406417 best DB hits: BLAST: pir:T18266; cycloinulo-oligosaccharide fructanotransferase (EC; E=4e-05 gb:AAG47946.1; AF222787_1 (AF222787) cycloinulo-oligosaccharide; E=5e-04 pir:E82410; hypothetical protein VCA0849 [imported] - Vibrio cholerae; E=0.016 PFAM: PF00801; PKD domain; E=0.36 PF00404; Dockerin type I repeat; E=0.17; cycloinulo-oligosaccharide fructanotransferase 5646919 1790490 RB10423 Rhodopirellula baltica SH 1 cycloinulo-oligosaccharide fructanotransferase NP_869418.1 5640680 D 243090 CDS NP_869419.1 32476425 1791428 complement(5646882..5647025) 1 NC_005027.1 hypothetical protein 5647025 1791428 RB10427 Rhodopirellula baltica SH 1 hypothetical protein NP_869419.1 5646882 R 243090 CDS NP_869420.1 32476426 1791549 complement(5647066..5648352) 1 NC_005027.1 best DB hits: BLAST: gb:AAC44056.1; (U51197) unknown [Sphingomonas sp. S88]; E=1e-12 pir:H75097; polysaccharide biosynthesis related protein PAB0783 -; E=4e-05 COG: PAB0783; COG2244 Membrane protein involved in the export of; E=3e-06 PFAM: PF01943; Polysaccharide biosynthesis pro; E=0.02; polysaccharide biosynthesis related protein 5648352 1791549 RB10428 Rhodopirellula baltica SH 1 polysaccharide biosynthesis related protein NP_869420.1 5647066 R 243090 CDS NP_869421.1 32476427 1796809 complement(5648519..5649511) 1 NC_005027.1 PMID: 11481431; hypothetical protein 5649511 1796809 RB10430 Rhodopirellula baltica SH 1 hypothetical protein NP_869421.1 5648519 R 243090 CDS NP_869422.1 32476428 1793563 complement(5649426..5650397) 1 NC_005027.1 hypothetical protein 5650397 1793563 RB10431 Rhodopirellula baltica SH 1 hypothetical protein NP_869422.1 5649426 R 243090 CDS NP_869423.1 32476429 1796899 complement(5650421..5651746) 1 NC_005027.1 hypothetical protein 5651746 1796899 RB10433 Rhodopirellula baltica SH 1 hypothetical protein NP_869423.1 5650421 R 243090 CDS NP_869424.1 32476430 1795204 complement(5651763..5652902) 1 NC_005027.1 best DB hits: BLAST: pir:A75597; mannosyltransferase - Deinococcus radiodurans (strain; E=3e-34 pir:I76776; Mannosyltransferase (EC 5.-.-.-) B - Escherichia coli; E=1e-27 gb:AAF04384.1; AF189151_7 (AF189151) WbdB; mannosyl transferase B; E=1e-27 COG: DRA0039; COG0438 Predicted glycosyltransferases; E=3e-35 PFAM: PF00534; Glycosyl transferases group 1; E=3.4e-29; mannosyltransferase 5652902 1795204 RB10434 Rhodopirellula baltica SH 1 mannosyltransferase NP_869424.1 5651763 R 243090 CDS NP_869425.1 32476431 1792152 complement(5652865..5654064) 1 NC_005027.1 PMID: 10978535 best DB hits: BLAST: pir:S22620; hypothetical protein 18.9 - Salmonella choleraesuis; E=7e-55 ddbj:BAB03210.1; (AB046360) glycosyltransferase; E=4e-53 ddbj:BAA94399.1; (AB041266) mannosyl transferase [Actinobacillus; E=2e-52 COG: DRA0040; COG0438 Predicted glycosyltransferases; E=1e-50 PFAM: PF00534; Glycosyl transferases group 1; E=2.4e-29; mannosyl transferase 5654064 1792152 RB10436 Rhodopirellula baltica SH 1 mannosyl transferase NP_869425.1 5652865 R 243090 CDS NP_869426.1 32476432 1795193 complement(5654134..5655714) 1 NC_005027.1 PMID: 7596293 best DB hits: BLAST: swissprot:Q57491; Y872_HAEIN HYPOTHETICAL SUGAR TRANSFERASE HI0872; E=3e-56 swissprot:Q46628; AMSG_ERWAM UDP-GALACTOSE-LIPID CARRIER; E=5e-56 pir:S61891; undecaprenyl-phosphate galactosephosphotransferase (EC; E=5e-56 COG: HI0872; COG2148 Sugar transferases involved in lipopolysaccharide; E=2e-57 PFAM: PF00895; ATP synthase 8; E=0.37 PF02397; Bacterial sugar transferase; E=3.6e-89; UDP-galactose-lipid carrier transferase 5655714 amsG 1795193 amsG Rhodopirellula baltica SH 1 UDP-galactose-lipid carrier transferase NP_869426.1 5654134 R 243090 CDS NP_869427.1 32476433 1795856 5655693..5655842 1 NC_005027.1 hypothetical protein 5655842 1795856 RB10440 Rhodopirellula baltica SH 1 hypothetical protein NP_869427.1 5655693 D 243090 CDS NP_869428.1 32476434 1795289 5655913..5656026 1 NC_005027.1 hypothetical protein 5656026 1795289 RB10441 Rhodopirellula baltica SH 1 hypothetical protein NP_869428.1 5655913 D 243090 CDS NP_869429.1 32476435 1790615 complement(5656076..5657962) 1 NC_005027.1 best DB hits: BLAST: swissprot:P42349; YC42_SYNY3 HYPOTHETICAL METHYLTRANSFERASE; E=1e-97 swissprot:Q55914; Y309_SYNY3 HYPOTHETICAL METHYLTRANSFERASE; E=2e-28 swissprot:O58549; Y819_PYRHO HYPOTHETICAL METHYLTRANSFERASE PH0819; E=3e-18 COG: sll1242; COG1032 Fe-S oxidoreductases family 2; E=9e-99; methyltransferase or Fe-S oxidoreductase 5657962 1790615 RB10442 Rhodopirellula baltica SH 1 methyltransferase or Fe-S oxidoreductase NP_869429.1 5656076 R 243090 CDS NP_869430.1 32476436 1791109 5658105..5658269 1 NC_005027.1 hypothetical protein 5658269 1791109 RB10445 Rhodopirellula baltica SH 1 hypothetical protein NP_869430.1 5658105 D 243090 CDS NP_869431.1 32476437 1792868 5658266..5667091 1 NC_005027.1 best DB hits: BLAST: ddbj:BAA89384.1; (AB025342) ORF10 [Moritella marina]; E=3e-37 pir:T30185; hypothetical protein 7 - Shewanella sp ----- gb:; E=3e-36 pir:T37057; probable multi-domain beta keto-acyl synthase -; E=8e-35 COG: DR1945; COG0331 (acyl-carrier-protein) S-malonyltransferase; E=3e-17 Rv3391_1; COG0451 Nucleoside-diphosphate-sugar epimerases; E=2e-14 BH2492; COG0331 (acyl-carrier-protein) S-malonyltransferase; E=2e-13 PFAM: PF00109; Beta-ketoacyl synthase, N-ter; E=7.7e-09 PF02801; Beta-ketoacyl synthase, C-ter; E=7.6e-61 PF00109; Beta-ketoacyl synthase, N-ter; E=3.6e-21; beta keto-acyl synthase 5667091 1792868 RB10446 Rhodopirellula baltica SH 1 beta keto-acyl synthase NP_869431.1 5658266 D 243090 CDS NP_869432.1 32476438 1791695 5667095..5668255 1 NC_005027.1 best DB hits: BLAST: pir:G70946; probable dioxygenase (EC 1.14.-.-) Rieske iron-sulfur; E=3e-18 pir:T14542; choline monooxygenase - beet ----- gb: AAB80954.1; E=2e-15 pir:G83331; anthranilate dioxygenase large subunit PA2512 [imported]; E=4e-14 COG: Rv3161c; COG2146 Ferredoxin subunits of nitrite reductase and; E=3e-19 PFAM: PF00355; Rieske [2Fe-2S] domain; E=1.8e-21; dioxygenase Rieske iron-sulfur component 5668255 1791695 RB10451 Rhodopirellula baltica SH 1 dioxygenase Rieske iron-sulfur component NP_869432.1 5667095 D 243090 CDS NP_869433.1 32476439 1793193 5668248..5669045 1 NC_005027.1 PMID: 8955309 PMID: 10973220 best DB hits: BLAST: gb:AAC44655.1; (U72144) 1-cyclohexenylcarbonyl CoA reductase; E=4e-40 pir:B69802; glucose 1-dehydrogenase homolog yfhR - Bacillus subtilis; E=4e-37 ddbj:BAB04657.1; (AP001510) glucose 1-dehydrogenase [Bacillus; E=2e-34 COG: BS_yfhR; COG1028 Dehydrogenases with different specificities; E=4e-38 BH0938; COG1028 Dehydrogenases with different specificities (related; E=2e-35 BS_fabG; COG1028 Dehydrogenases with different specificities; E=3e-26 PFAM: PF00106; short chain dehydrogenase; E=8.7e-45 PF00678; Short chain dehydrogenase/reduct; E=0.0016; 1-cyclohexenylcarbonyl CoA reductase 5669045 chcA 1793193 chcA Rhodopirellula baltica SH 1 1-cyclohexenylcarbonyl CoA reductase NP_869433.1 5668248 D 243090 CDS NP_869434.1 32476440 1796843 5669104..5670384 1 NC_005027.1 hypothetical protein 5670384 1796843 RB10456 Rhodopirellula baltica SH 1 hypothetical protein NP_869434.1 5669104 D 243090 CDS NP_869435.1 32476441 1790095 complement(5670510..5671130) 1 NC_005027.1 PMID: 7541909 best DB hits: BLAST: ddbj:BAA08402.1; (D49424) RNA-binding protein [Anabaena; E=4e-16 pir:S58673; RNA-binding protein RbpC - Anabaena variabilis; E=4e-16 pir:S77263; RNA-binding protein ssr1480 - Synechocystis sp. (strain; E=1e-15 COG: ssr1480; COG0724 RNA-binding proteins (RRM domain); E=1e-16 PFAM: PF00076; RNA recognition motif. (a.k.a. RRM,; E=2.9e-31; RNA-binding protein 5671130 grp 1790095 grp Rhodopirellula baltica SH 1 RNA-binding protein NP_869435.1 5670510 R 243090 CDS NP_869436.1 32476442 1792944 complement(5671227..5672684) 1 NC_005027.1 PMID: 1459957 PMID: 8288631 best DB hits: BLAST: ddbj:BAB04923.1; (AP001511) protoporphyrinogen IX and; E=2e-46 swissprot:P32397; PPOX_BACSU PROTOPORPHYRINOGEN OXIDASE (PPO); E=9e-41 swissprot:P56601; PPOX_MYXXA PROTOPORPHYRINOGEN OXIDASE (PPO); E=8e-39 COG: BH1204; COG1232 Protoporphyrinogen oxidase; E=1e-47 PFAM: PF01494; FAD binding domain; E=0.64 PF01266; D-amino acid oxidase; E=0.00034 PF00221; Phenylalanine and histidine amm; E=0.39; protoporphyrinogen oxidase 5672684 hemY 1792944 hemY Rhodopirellula baltica SH 1 protoporphyrinogen oxidase NP_869436.1 5671227 R 243090 CDS NP_869437.1 32476443 1790934 complement(5672698..5674119) 1 NC_005027.1 hypothetical protein 5674119 1790934 RB10460 Rhodopirellula baltica SH 1 hypothetical protein NP_869437.1 5672698 R 243090 CDS NP_869438.1 32476444 1791244 5674183..5674386 1 NC_005027.1 hypothetical protein 5674386 1791244 RB10462 Rhodopirellula baltica SH 1 hypothetical protein NP_869438.1 5674183 D 243090 CDS NP_869439.1 32476445 1795191 5674394..5675368 1 NC_005027.1 PMID: 8449868 PMID: 7961651 PMID: 9149148 best DB hits: BLAST: swissprot:P28861; FENR_ECOLI FERREDOXIN--NADP REDUCTASE (FNR); E=3e-10 pdb:1FDR; Flavodoxin Reductase From E. Coli; E=3e-10 pir:F82624; ferredoxin-NADP reductase XF1889 [imported] - Xylella; E=5e-10 COG: fpr; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases); E=3e-11 slr1643; COG0369 Sulfite reductase flavoprotein subunit; E=0.005 PFAM: PF00970; Oxidoreductase FAD-binding doma; E=0.015 PF00175; Oxidoreductase FAD/NAD-binding; E=1.2e-06; ferredoxin-NADP reductase 5675368 fpr 1795191 fpr Rhodopirellula baltica SH 1 ferredoxin-NADP reductase NP_869439.1 5674394 D 243090 CDS NP_869440.1 32476446 1793134 5675439..5676728 1 NC_005027.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 5676728 glgC 1793134 glgC Rhodopirellula baltica SH 1 glucose-1-phosphate adenylyltransferase NP_869440.1 5675439 D 243090 CDS NP_869441.1 32476447 1790559 complement(5676890..5677426) 1 NC_005027.1 PMID: 7806516 best DB hits: BLAST: gb:AAF98278.1; AF197933_8 (AF197933) beta-hydroxyacyl-ACP; E=1e-05 pir:H81661; (3R)-hydroxymyristol-(acyl carrier protein) dehydratase; E=4e-05 pir:B33171; hypothetical 17K protein (lpxA 5' region) - Escherichia; E=5e-05 COG: fabZ; COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier; E=5e-06 PFAM: PF01377; Thioester dehydrase; E=1.3e-15; beta-hydroxyacyl-ACP dehydratase 5677426 fabZ 1790559 fabZ Rhodopirellula baltica SH 1 beta-hydroxyacyl-ACP dehydratase NP_869441.1 5676890 R 243090 CDS NP_869442.1 32476448 1792594 complement(5677614..5677835) 1 NC_005027.1 PMID: 3037488 PMID: 1909328 best DB hits: BLAST: pir:A70121; probable translation initiation factor IF-1 - Lyme; E=1e-20 swissprot:O83135; IF1_TREPA TRANSLATION INITIATION FACTOR IF-1; E=3e-20 swissprot:O51191; IF1_BORBU TRANSLATION INITIATION FACTOR IF-1; E=3e-20 COG: BB0169; COG0361 Translation initiation factor IF-1; E=1e-21 PFAM: PF00575; S1 RNA binding domain; E=1.1e-07; translation initiation factor IF-1 5677835 infA 1792594 infA Rhodopirellula baltica SH 1 translation initiation factor IF-1 NP_869442.1 5677614 R 243090 CDS NP_869443.1 32476449 1791252 complement(5677848..5678261) 1 NC_005027.1 PMID: 3884974 PMID: 1091515 best DB hits: BLAST: swissprot:P02363; RS9_ECOLI 30S RIBOSOMAL PROTEIN S9 -----; E=1e-22 gb:AAK02605.1; (AE006087) RpS9 [Pasteurella multocida]; E=5e-22 pir:C82308; ribosomal protein S9 VC0571 [imported] - Vibrio cholerae; E=2e-21 COG: rpsI; COG0103 Ribosomal protein S9; E=1e-23 PFAM: PF00380; Ribosomal protein S9/S16; E=7.2e-51; 30S ribosomal protein S9 5678261 rpsI 1791252 rpsI Rhodopirellula baltica SH 1 30S ribosomal protein S9 NP_869443.1 5677848 R 243090 CDS NP_869444.1 32476450 1793989 complement(5678304..5678759) 1 NC_005027.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 5678759 rplM 1793989 rplM Rhodopirellula baltica SH 1 50S ribosomal protein L13 NP_869444.1 5678304 R 243090 CDS NP_869445.1 32476451 1790760 complement(5678887..5679453) 1 NC_005027.1 hypothetical protein 5679453 1790760 RB10472 Rhodopirellula baltica SH 1 hypothetical protein NP_869445.1 5678887 R 243090 CDS NP_869446.1 32476452 1790004 5679433..5681868 1 NC_005027.1 best DB hits: BLAST: pir:D71687; alkaline proteinase secretion protein apre (aprE) RP314; E=0.032 pir:E82263; conserved hypothetical protein VC0913 [imported] -; E=0.053 gb:AAK03081.1; (AE006139) unknown [Pasteurella multocida]; E=0.13 COG: RP314; COG0845 Membrane-fusion protein; E=0.003 PFAM: PF01590; GAF domain; E=0.00029 PF00364; Biotin-requiring enzyme; E=0.0022; alkaline protease secretion protein AprE 5681868 1790004 RB10473 Rhodopirellula baltica SH 1 alkaline protease secretion protein AprE NP_869446.1 5679433 D 243090 CDS NP_869447.1 32476453 1795682 5681878..5682843 1 NC_005027.1 best DB hits: BLAST: pir:E82436; AcrAAcrE family protein VCA0639 [imported] - Vibrio; E=7e-04 pir:C70415; cation efflux system (czcB-like) - Aquifex aeolicus; E=0.040 pir:D83099; probable RND efflux membrane fusion protein precursor; E=0.50 COG: VCA0639; COG0845 Membrane-fusion protein; E=6e-05 PFAM: PF00364; Biotin-requiring enzyme; E=0.0048 PF00529; HlyD family secretion protein; E=0.0018; AcrA/AcrE family protein 5682843 1795682 RB10478 Rhodopirellula baltica SH 1 AcrA/AcrE family protein NP_869447.1 5681878 D 243090 CDS NP_869448.1 32476454 1793435 5682921..5685158 1 NC_005027.1 best DB hits: BLAST: pir:F70091; hypothetical protein yydH - Bacillus subtilis -----; E=2e-06 pir:H70326; hypothetical protein aq_294 - Aquifex aeolicus -----; E=0.29 PFAM: PF02163; Sterol-regulatory element bindi; E=0.039; hypothetical protein 5685158 1793435 RB10479 Rhodopirellula baltica SH 1 hypothetical protein NP_869448.1 5682921 D 243090 CDS NP_869449.1 32476455 1790767 5685184..5685432 1 NC_005027.1 hypothetical protein 5685432 1790767 RB10481 Rhodopirellula baltica SH 1 hypothetical protein NP_869449.1 5685184 D 243090 CDS NP_869450.1 32476456 1793774 5685437..5685838 1 NC_005027.1 hypothetical protein 5685838 1793774 RB10483 Rhodopirellula baltica SH 1 hypothetical protein NP_869450.1 5685437 D 243090 CDS NP_869451.1 32476457 1794693 5685979..5688987 1 NC_005027.1 PMID: 3027506 PMID: 3027506 best DB hits: BLAST: gb:AAA24517.1; (M30198) recQ [Escherichia coli]; E=2e-78 gb:AAA67618.1; (M87049) DNA-dependent ATPase, DNA helicase; E=2e-78 pir:BVECRQ; DNA helicase recQ - Escherichia coli (strain K-12); E=2e-78 COG: recQ; COG0514 Superfamily II DNA helicase; E=2e-79 PFAM: PF00270; DEAD/DEAH box helicase; E=2.7e-39 PF00271; Helicase conserved C-terminal doma; E=2.1e-28; hypothetical protein 5688987 recQ 1794693 recQ Rhodopirellula baltica SH 1 hypothetical protein NP_869451.1 5685979 D 243090 CDS NP_869452.1 32476458 1792857 complement(5689099..5691714) 1 NC_005027.1 PMID: 20572072 best DB hits: BLAST: pir:S75136; sensory transduction histidine kinase slr2104 -; E=3e-67 pir:E83443; probable sensorresponse regulator hybrid PA1611; E=2e-64 pir:H82211; sensory box sensor histidine kinaseresponse regulator; E=8e-61 COG: VC1349_2; COG0642 Sensory transduction histidine kinases; E=7e-62 PFAM: PF00785; PAC motif; E=0.00076 PF00512; His Kinase A (phosphoacceptor) d; E=1.6e-28 PF02518; Histidine kinase-, DNA gyrase B-; E=1.6e-42; sensory transduction histidine kinase- sensory histidine kinase / response regulator hybrid 5691714 1792857 RB10488 Rhodopirellula baltica SH 1 sensory transduction histidine kinase- sensory histidine kinase / response regulator hybrid NP_869452.1 5689099 R 243090 CDS NP_869453.1 32476459 1790035 complement(5691635..5692624) 1 NC_005027.1 best DB hits: BLAST: pir:G82805; two-component system, regulatory protein XF0450; E=5e-09 swissprot:P43501; PILH_PSEAE PILH PROTEIN ----- pir: S40035; E=3e-08 pir:F82618; chemotaxis-related protein kinase XF1952 [imported] -; E=6e-08 COG: XF0450; COG0784 CheY-like receiver domains; E=5e-10 PA2798; COG2204 AAA superfamily ATPases with N-terminal receiver; E=6e-08 BH1910_1; COG0784 CheY-like receiver domains; E=2e-07 PFAM: PF00072; Response regulator receiver doma; E=5.7e-25; two-component system regulatory protein 5692624 cheY 1790035 cheY Rhodopirellula baltica SH 1 two-component system regulatory protein NP_869453.1 5691635 R 243090 CDS NP_869454.1 32476460 1791578 5692652..5693962 1 NC_005027.1 best DB hits: BLAST: gb:AAC15080.1; (L37087) HrmA [Nostoc sp.]; E=5e-25 pir:E72377; conserved hypothetical protein - Thermotoga maritima; E=5e-23; hypothetical protein 5693962 1791578 RB10494 Rhodopirellula baltica SH 1 hypothetical protein NP_869454.1 5692652 D 243090 CDS NP_869455.1 32476461 1790756 complement(5693999..5695177) 1 NC_005027.1 hypothetical protein 5695177 1790756 RB10497 Rhodopirellula baltica SH 1 hypothetical protein NP_869455.1 5693999 R 243090 CDS NP_869456.1 32476462 1793877 5695422..5696615 1 NC_005027.1 PMID: 8021172 best DB hits: BLAST: swissprot:P40924; PGK_BACSU PHOSPHOGLYCERATE KINASE ----- pir:; E=3e-96 swissprot:O52632; PGK_CLOAB PHOSPHOGLYCERATE KINASE ----- gb:; E=4e-96 swissprot:P29409; PGKH_SPIOL PHOSPHOGLYCERATE KINASE, CHLOROPLAST; E=2e-93 COG: BS_pgk; COG0126 3-phosphoglycerate kinase; E=3e-97 PFAM: PF00162; Phosphoglycerate kinase; E=8.3e-186; phosphoglycerate kinase 5696615 pgk 1793877 pgk Rhodopirellula baltica SH 1 phosphoglycerate kinase NP_869456.1 5695422 D 243090 CDS NP_869457.1 32476463 1792844 5696612..5696818 1 NC_005027.1 hypothetical protein 5696818 1792844 RB10501 Rhodopirellula baltica SH 1 hypothetical protein NP_869457.1 5696612 D 243090 CDS NP_869458.1 32476464 1790423 5696901..5698274 1 NC_005027.1 best DB hits: BLAST: pir:B72359; lipopolysaccharide biosynthesis protein BplA -; E=7e-09 ddbj:BAB05939.1; (AP001514) dehydrogenase [Bacillus halodurans]; E=2e-07 gb:AAC23913.1; (AF039207) NADH-dependent dehydrogenase homolog; E=2e-06 COG: TM0585; COG0673 Predicted dehydrogenases and related proteins; E=7e-10 PFAM: PF01118; Semialdehyde dehydrogenase, NA; E=0.37 PF01408; Oxidoreductase, NAD-bin; E=6e-09 PF02894; Oxidoreductase, C-termi; E=0.52; lipopolysaccharide biosynthesis protein BplA- NADH-dependent oxidoreductase 5698274 1790423 RB10503 Rhodopirellula baltica SH 1 lipopolysaccharide biosynthesis protein BplA- NADH-dependent oxidoreductase NP_869458.1 5696901 D 243090 CDS NP_869459.1 32476465 1791293 5698496..5700433 1 NC_005027.1 PMID: 8955399 best DB hits: BLAST: gb:AAC44671.1; (U66897) alpha-glucosidase [Bacteroides; E=4e-42 PFAM: PF01729; Quinolinate phosphoribosyl transfera; E=0.71; alpha-glucosidase 5700433 1791293 RB10507 Rhodopirellula baltica SH 1 alpha-glucosidase NP_869459.1 5698496 D 243090 CDS NP_869460.1 32476466 1791200 complement(5700449..5700982) 1 NC_005027.1 best DB hits: BLAST: pir:F83378; hypothetical protein PA2141 [imported] - Pseudomonas; E=7e-08 pir:B82935; conserved hypothetical UU083 [imported] - Ureaplasma; E=9e-08 pir:G71875; hypothetical protein jhp0886 - Helicobacter pylori; E=2e-07 COG: PA2141; COG1546 Uncharacterized protein (competence- and; E=7e-09 PFAM: PF02464; Competence-damaged protein; E=8.7e-13; related to competence-damage inducible protein 5700982 cinA 1791200 cinA Rhodopirellula baltica SH 1 related to competence-damage inducible protein NP_869460.1 5700449 R 243090 CDS NP_869461.1 32476467 1792565 complement(5700979..5701668) 1 NC_005027.1 PMID: 9126287 best DB hits: BLAST: swissprot:Q49885; KCY_MYCLE CYTIDYLATE KINASE (CK) (CYTIDINE; E=2e-30 swissprot:Q9RC80; KCY_BACHD CYTIDYLATE KINASE (CK) (CYTIDINE; E=5e-30 pir:S75604; pantothenate synthetase panC - Synechocystis sp. (strain; E=3e-29 COG: BH1634; COG0283 Cytidylate kinase; E=5e-31 PFAM: PF02223; Thymidylate kinase; E=0.42 PF00485; Phosphoribulokinase / Uridine; E=0.094 PF01202; Shikimate kinase; E=3.5e-05; cytidylate kinase 5701668 cmk 1792565 cmk Rhodopirellula baltica SH 1 cytidylate kinase NP_869461.1 5700979 R 243090 CDS NP_869462.1 32476468 1794247 complement(5701665..5704376) 1 NC_005027.1 best DB hits: BLAST: pir:A75496; conserved hypothetical protein - Deinococcus radiodurans; E=1e-12 pir:F83287; hypothetical protein PA2873 [imported] - Pseudomonas; E=8e-11 pir:F70464; hypothetical protein aq_1912 - Aquifex aeolicus -----; E=1e-10 COG: DR0620_2; COG1305 transglutaminases, cysteine; E=2e-13 PFAM: PF01841; Transglutaminase-like superfam; E=3e-17; transmembrane protein 5704376 1794247 RB10512 Rhodopirellula baltica SH 1 transmembrane protein NP_869462.1 5701665 R 243090 CDS NP_869463.1 32476469 1796800 complement(5704327..5705595) 1 NC_005027.1 best DB hits: BLAST: pir:H71125; hypothetical protein PH0774 - Pyrococcus horikoshii; E=6e-06 pir:T34965; probable membrane protein - Streptomyces coelicolor; E=7e-05 pir:A75012; conserved hypothetical protein PAB1277 - Pyrococcus; E=1e-04 COG: PH0774; COG1721 Uncharacterized ACR; E=5e-07 PFAM: PF01882; Protein of unknown function DUF58; E=5.4e-20; hypothetical protein 5705595 1796800 RB10515 Rhodopirellula baltica SH 1 hypothetical protein NP_869463.1 5704327 R 243090 CDS NP_869464.1 32476470 1794429 complement(5705602..5706546) 1 NC_005027.1 best DB hits: BLAST: pir:C69791; methanol dehydrogenase regulation homolog yeaC -; E=4e-73 ddbj:BAB04323.1; (AP001509) methanol dehydrogenase regulatory; E=6e-73 pir:S75782; methanol dehydrogenase regulatory protein -; E=3e-70 COG: BS_yeaC; COG0714 MoxR-like ATPases; E=4e-74 PFAM: PF00004; ATPase associated with; E=5.2e-06 PF01078; Magnesium chelatase, subunit; E=3.4e-13; methanol dehydrogenase regulation homolog yeaC 5706546 yeaC 1794429 yeaC Rhodopirellula baltica SH 1 methanol dehydrogenase regulation homolog yeaC NP_869464.1 5705602 R 243090 CDS NP_869465.1 32476471 1790483 complement(5706651..5706881) 1 NC_005027.1 hypothetical protein 5706881 1790483 RB10518 Rhodopirellula baltica SH 1 hypothetical protein NP_869465.1 5706651 R 243090 CDS NP_869466.1 32476472 1793985 5706831..5708198 1 NC_005027.1 best DB hits: BLAST: pir:F81236; DNA processing chain A NMB0116 [imported] - Neisseria; E=5e-47 pir:C82009; DprA homolog NMA0158 [imported] - Neisseria meningitidis; E=4e-46 pir:G82369; smf protein VC0048 [imported] - Vibrio cholerae (group; E=8e-44 COG: NMB0116; COG0758 Predicted Rossmann-fold nucleotide-binding protein; E=5e-48 PFAM: PF00633; Helix-hairpin-helix motif.; E=0.15 PF02481; SMF family; E=2.4e-83; DNA processing chain A 5708198 dprA 1793985 dprA Rhodopirellula baltica SH 1 DNA processing chain A NP_869466.1 5706831 D 243090 CDS NP_869467.1 32476473 1793708 5708182..5708343 1 NC_005027.1 hypothetical protein 5708343 1793708 RB10521 Rhodopirellula baltica SH 1 hypothetical protein NP_869467.1 5708182 D 243090 CDS NP_869468.1 32476474 1793701 5708488..5712261 1 NC_005027.1 best DB hits: BLAST: pir:D82995; conserved hypothetical protein PA5201 [imported] -; E=9e-17 pir:T35268; probable transcription accessory protein - Streptomyces; E=3e-16 gb:AAK03532.1; (AE006181) unknown [Pasteurella multocida]; E=3e-15 COG: PA5201; COG2183 Predicted RNA binding protein, contains S1 domain; E=8e-18 PFAM: PF00575; S1 RNA binding domain; E=7.3e-15; RNA-binding protein 5712261 1793701 RB10524 Rhodopirellula baltica SH 1 RNA-binding protein NP_869468.1 5708488 D 243090 CDS NP_869469.1 32476475 1793583 5712258..5712755 1 NC_005027.1 hypothetical protein 5712755 1793583 RB10530 Rhodopirellula baltica SH 1 hypothetical protein NP_869469.1 5712258 D 243090 CDS NP_869470.1 32476476 1794801 5712827..5712958 1 NC_005027.1 hypothetical protein 5712958 1794801 RB10531 Rhodopirellula baltica SH 1 hypothetical protein NP_869470.1 5712827 D 243090 CDS NP_869471.1 32476477 1790893 complement(5712955..5714478) 1 NC_005027.1 best DB hits: BLAST: pir:A82193; Sunnucleolar protein family protein VC1502 [imported] -; E=3e-23 gb:AAG56825.1; AE005406_4 (AE005406) nucleolar proteins; E=2e-21 pir:C64945; probable rRNA methylase yebU - Escherichia coli -----; E=5e-21 COG: yebU_1; COG0144 tRNA and rRNA cytosine-C5-methylases; E=5e-22 PFAM: PF01189; NOL1/NOP2/sun family; E=1.1e-24; Sun/nucleolar protein family protein- tRNA and rRNA cytosine-C5-methylase 5714478 sun 1790893 sun Rhodopirellula baltica SH 1 Sun/nucleolar protein family protein- tRNA and rRNA cytosine-C5-methylase NP_869471.1 5712955 R 243090 CDS NP_869472.1 32476478 1791898 complement(5714475..5714810) 1 NC_005027.1 hypothetical protein 5714810 1791898 RB10535 Rhodopirellula baltica SH 1 hypothetical protein NP_869472.1 5714475 R 243090 CDS NP_869473.1 32476479 1790058 complement(5714785..5715492) 1 NC_005027.1 PMID: http://us.expasy.org/cgi-bin/niceprot.pl?P28016 best DB hits: BLAST: ddbj:BAB03783.1; (AP001507) stage V sporulation protein G; E=3e-11 swissprot:P28016; SP5G_BACME STAGE V SPORULATION PROTEIN G -----; E=8e-10 swissprot:P28015; SP5G_BACSU STAGE V SPORULATION PROTEIN G -----; E=1e-09 COG: BH0064; COG2088 Uncharacterized protein, involved in the regulation; E=3e-12 BS_spoVG; COG2088 Uncharacterized protein, involved in the; E=1e-10 AF1778; COG2088 Uncharacterized protein, involved in the regulation; E=3e-05; stage V sporulation protein G- protein involved in regulation of septum location 5715492 spoVG 1790058 spoVG Rhodopirellula baltica SH 1 stage V sporulation protein G- protein involved in regulation of septum location NP_869473.1 5714785 R 243090 CDS NP_869474.1 32476480 1794233 complement(5715502..5716491) 1 NC_005027.1 best DB hits: BLAST: swissprot:Q9KGK0; ISPE_BACHD; E=2e-13 swissprot:Q9RR89; ISPE_DEIRA; E=1e-12 swissprot:O05596; ISPE_MYCTU; E=2e-10 COG: BH0061; COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol; E=2e-14 ychB; COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate; E=2e-05 TM1383; COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol; E=2e-04; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 5716491 ispE 1794233 ispE Rhodopirellula baltica SH 1 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase NP_869474.1 5715502 R 243090 CDS NP_869475.1 32476481 1790528 complement(5716496..5717476) 1 NC_005027.1 best DB hits: BLAST: pir:E70410; hypothetical protein aq_1276 - Aquifex aeolicus -----; E=2e-15 gb:AAA96792.1; (U51683) ORF9; hypothetical protein [Brucella; E=4e-14 pir:G71632; hypothetical protein RP730 - Rickettsia prowazekii; E=8e-12; hypothetical protein 5717476 1790528 RB10538 Rhodopirellula baltica SH 1 hypothetical protein NP_869475.1 5716496 R 243090 CDS NP_869476.1 32476482 1795827 complement(5717509..5718741) 1 NC_005027.1 PMID: 1987124 PMID: 1602961 PMID: 1429432 PMID: 8444173 PMID: 8366125 best DB hits: BLAST: pir:F72094; UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine; E=4e-46 swissprot:O24991; LPXD_HELPY UDP-3-O-[3-HYDROXYMYRISTOYL]; E=1e-43 gb:AAC45422.1; (U79481); E=7e-43 COG: CPn0302; COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine; E=4e-47 lpxA; COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine; E=1e-13 NMB0178; COG1043 Acyl-[acyl carrier; E=2e-12 PFAM: PF00132; Bacterial transferase hexapeptide (f; E=0.0016; UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase 5718741 lpdX 1795827 lpdX Rhodopirellula baltica SH 1 UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase NP_869476.1 5717509 R 243090 CDS NP_869477.1 32476483 1790376 5718795..5719784 1 NC_005027.1 best DB hits: BLAST: gb:AAF26789.1; AC016829_13 (AC016829) O-linked GlcNAc; E=1e-05 swissprot:P56558; OGT1_RAT UDP-N-ACETYLGLUCOSAMINE--PEPTIDE; E=3e-05 gb:AAF31458.1; (AF223393) HRNT1 [Homo sapiens]; E=3e-05 COG: TP0468; COG0457 TPR-repeat-containing proteins; E=7e-04 PFAM: PF00515; TPR Domain; E=0.00012; TPR repeat-containing O-linked GlcNAc transferase 5719784 1790376 RB10541 Rhodopirellula baltica SH 1 TPR repeat-containing O-linked GlcNAc transferase NP_869477.1 5718795 D 243090 CDS NP_869478.1 32476484 1790482 5719900..5721576 1 NC_005027.1 Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase 5721576 glyS 1790482 glyS Rhodopirellula baltica SH 1 glycyl-tRNA synthetase NP_869478.1 5719900 D 243090 CDS NP_869479.1 32476485 1790742 5721577..5721732 1 NC_005027.1 hypothetical protein 5721732 1790742 RB10548 Rhodopirellula baltica SH 1 hypothetical protein NP_869479.1 5721577 D 243090 CDS NP_869480.1 32476486 1789962 complement(5721750..5722643) 1 NC_005027.1 best DB hits: BLAST: pir:G83242; hypothetical protein PA3219 [imported] - Pseudomonas; E=6e-35 COG: PA3219; COG2908 Uncharacterized BCR; E=5e-36; hypothetical protein 5722643 1789962 RB10549 Rhodopirellula baltica SH 1 hypothetical protein NP_869480.1 5721750 R 243090 CDS NP_869481.1 32476487 1795256 5722722..5722991 1 NC_005027.1 hypothetical protein 5722991 1795256 RB10551 Rhodopirellula baltica SH 1 hypothetical protein NP_869481.1 5722722 D 243090 CDS NP_869482.1 32476488 1791245 5722904..5723086 1 NC_005027.1 hypothetical protein 5723086 1791245 RB10552 Rhodopirellula baltica SH 1 hypothetical protein NP_869482.1 5722904 D 243090 CDS NP_869483.1 32476489 1791719 5723185..5724069 1 NC_005027.1 PMID: 3086287 PMID: 3027051 PMID: 3036777 best DB hits: BLAST: swissprot:P08064; DHSC_BACSU SUCCINATE DEHYDROGENASE CYTOCHROME; E=2e-23 embl:CAA69871.1; (Y08563) succinate dehydrogenase subunit C; E=6e-20 ddbj:BAB06812.1; (AP001517) succinate dehydrogenase cytochrome; E=1e-19 COG: BS_sdhC; COG2009 Succinate dehydrogenase/fumarate reductase; E=2e-24; succinate dehydrogenase cytochrome B-558 subunit 5724069 sdhC 1791719 sdhC Rhodopirellula baltica SH 1 succinate dehydrogenase cytochrome B-558 subunit NP_869483.1 5723185 D 243090 CDS NP_869484.1 32476490 1794180 5724111..5726120 1 NC_005027.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 5726120 sdhA 1794180 sdhA Rhodopirellula baltica SH 1 succinate dehydrogenase flavoprotein subunit NP_869484.1 5724111 D 243090 CDS NP_869485.1 32476491 1790667 5726209..5727063 1 NC_005027.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 5727063 sdhB 1790667 sdhB Rhodopirellula baltica SH 1 succinate dehydrogenase iron-sulfur subunit NP_869485.1 5726209 D 243090 CDS NP_869486.1 32476492 1793244 5727064..5727468 1 NC_005027.1 signal peptide 5727468 1793244 RB10556 Rhodopirellula baltica SH 1 signal peptide NP_869486.1 5727064 D 243090 CDS NP_869487.1 32476493 1790723 complement(5727501..5729066) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAA95412.1; (AB036744) This protein has 3 calmodulin-like; E=0.002 ddbj:BAB03079.1; (AP001313) calmodulin-like protein [Arabidopsis; E=0.016 pir:A31797; Spec-related protein (clone LpS1) - sea urchin; E=0.032 PFAM: PF00036; EF hand; E=0.096; calmodulin-like membrane associated Ca(2+)-binding protein 5729066 1790723 RB10558 Rhodopirellula baltica SH 1 calmodulin-like membrane associated Ca(2+)-binding protein NP_869487.1 5727501 R 243090 CDS NP_869488.1 32476494 1795366 complement(5729063..5731867) 1 NC_005027.1 best DB hits: PFAM: PF00263; Bacterial type II and III secretio; E=0.066; GSP protein 5731867 1795366 RB10560 Rhodopirellula baltica SH 1 GSP protein NP_869488.1 5729063 R 243090 CDS NP_869489.1 32476495 1793192 5732009..5732605 1 NC_005027.1 hypothetical protein 5732605 1793192 RB10563 Rhodopirellula baltica SH 1 hypothetical protein NP_869489.1 5732009 D 243090 CDS NP_869490.1 32476496 1792444 complement(5732695..5734146) 1 NC_005027.1 PMID: 3020045 best DB hits: BLAST: ddbj:BAA83912.1; (AB024550) GNTP [Bacillus halodurans] -----; E=3e-28 gb:AAK03824.1; (AE006211) GntP [Pasteurella multocida]; E=4e-28 swissprot:Q9Z670; GNTP_ZYMMO GLUCONATE PERMEASE ----- gb:; E=6e-26 COG: BH0805; COG2610 H+/gluconate symporter and related permeases; E=3e-29 PFAM: PF02447; GntP family permease; E=1.7e-49; gluconate permease gntP 5734146 gntP 1792444 gntP Rhodopirellula baltica SH 1 gluconate permease gntP NP_869490.1 5732695 R 243090 CDS NP_869491.1 32476497 1790032 complement(5734191..5734994) 1 NC_005027.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 5734994 ate1 1790032 ate1 Rhodopirellula baltica SH 1 arginyl-tRNA-protein transferase NP_869491.1 5734191 R 243090 CDS NP_869492.1 32476498 1793935 complement(5735008..5736174) 1 NC_005027.1 hypothetical protein 5736174 1793935 RB10569 Rhodopirellula baltica SH 1 hypothetical protein NP_869492.1 5735008 R 243090 CDS NP_869493.1 32476499 1791771 complement(5736125..5736859) 1 NC_005027.1 hypothetical protein 5736859 1791771 RB10570 Rhodopirellula baltica SH 1 hypothetical protein NP_869493.1 5736125 R 243090 CDS NP_869494.1 32476500 1793873 5736845..5737138 1 NC_005027.1 hypothetical protein 5737138 1793873 RB10573 Rhodopirellula baltica SH 1 hypothetical protein NP_869494.1 5736845 D 243090 CDS NP_869495.1 32476501 1794737 complement(5737148..5738278) 1 NC_005027.1 hypothetical protein 5738278 1794737 RB10574 Rhodopirellula baltica SH 1 hypothetical protein NP_869495.1 5737148 R 243090 CDS NP_869496.1 32476502 1790497 5738298..5738786 1 NC_005027.1 hypothetical protein 5738786 1790497 RB10576 Rhodopirellula baltica SH 1 hypothetical protein NP_869496.1 5738298 D 243090 CDS NP_869497.1 32476503 1790116 complement(5738949..5739254) 1 NC_005027.1 signal peptide 5739254 1790116 RB10579 Rhodopirellula baltica SH 1 signal peptide NP_869497.1 5738949 R 243090 CDS NP_869498.1 32476504 1796771 5739063..5739272 1 NC_005027.1 signal peptide 5739272 1796771 RB10580 Rhodopirellula baltica SH 1 signal peptide NP_869498.1 5739063 D 243090 CDS NP_869499.1 32476505 1795317 5739353..5740507 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein 5740507 1795317 RB10581 Rhodopirellula baltica SH 1 hypothetical protein NP_869499.1 5739353 D 243090 CDS NP_869500.1 32476506 1791327 5740602..5743778 1 NC_005027.1 best DB hits: BLAST: pir:B70374; conserved hypothetical protein aq_854 - Aquifex aeolicus; E=1e-05 ddbj:BAA91540.1; (AK001182) unnamed protein product [Homo; E=0.12 embl:CAB98267.1; (AJ276171) ASPIC [Homo sapiens]; E=0.12 COG: aq_854; COG0457 TPR-repeat-containing proteins; E=1e-06 PFAM: PF00515; TPR Domain; E=0.059; TPR repeat-containing protein 5743778 1791327 RB10583 Rhodopirellula baltica SH 1 TPR repeat-containing protein NP_869500.1 5740602 D 243090 CDS NP_869501.1 32476507 1792756 5743888..5745102 1 NC_005027.1 best DB hits: BLAST: gb:AAG19595.1; (AE005049) X-pro aminopeptidase homolog; PepQ2; E=1e-43 gb:AAB89220.1; (AE000962) X-pro aminopeptidase (pepQ); E=3e-16 swissprot:Q10698; YK89_MYCTU PROBABLE DIPEPTIDASE RV2089C -----; E=4e-16 COG: VNG1233G; COG0006 Xaa-Pro aminopeptidase; E=1e-44 PFAM: PF00557; metallopeptidase M24; E=0.3; X-pro aminopeptidase PepQ2 5745102 pepQ 1792756 pepQ Rhodopirellula baltica SH 1 X-pro aminopeptidase PepQ2 NP_869501.1 5743888 D 243090 CDS NP_869502.1 32476508 1790215 5745087..5745764 1 NC_005027.1 best DB hits: BLAST: pir:F75129; hypothetical protein PAB0562 - Pyrococcus abyssi (strain; E=4e-07 embl:CAC23276.1; (AL512965) hypothetical [Sulfolobus; E=1e-05 pir:A69108; probable phosphoesterase (EC 3.1.-.-) MTH1803 -; E=2e-04 COG: PAB0562; COG1407 Predicted ICC-like phosphoesterases; E=3e-08; phosphoesterase 5745764 1790215 RB10587 Rhodopirellula baltica SH 1 phosphoesterase NP_869502.1 5745087 D 243090 CDS NP_869503.1 32476509 1794650 5745783..5745971 1 NC_005027.1 hypothetical protein 5745971 1794650 RB10589 Rhodopirellula baltica SH 1 hypothetical protein NP_869503.1 5745783 D 243090 CDS NP_869504.1 32476510 1793360 5745968..5747566 1 NC_005027.1 PMID: 10368134 best DB hits: BLAST: swissprot:P75920; MDOC_ECOLI GLUCANS BIOSYNTHESIS PROTEIN MDOC; E=2e-10 gb:AAG55793.1; AE005315_7 (AE005315) orf, hypothetical protein; E=2e-09 embl:CAB77037.1; (AJ245997) hypothetical protein [Xanthomonas; E=0.003 PFAM: PF00023; Ank repeat; E=1e-05; glucans biosynthesis protein mdoC- transmembrane protein 5747566 1793360 RB10590 Rhodopirellula baltica SH 1 glucans biosynthesis protein mdoC- transmembrane protein NP_869504.1 5745968 D 243090 CDS NP_869505.1 32476511 1795007 complement(5747563..5748924) 1 NC_005027.1 catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate; pyrophosphate--fructose-6-phosphate 1-phosphotransferase 5748924 pfk 1795007 pfk Rhodopirellula baltica SH 1 pyrophosphate--fructose-6-phosphate 1-phosphotransferase NP_869505.1 5747563 R 243090 CDS NP_869506.1 32476512 1794607 complement(5749128..5752628) 1 NC_005027.1 biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase 5752628 pyc 1794607 pyc Rhodopirellula baltica SH 1 pyruvate carboxylase NP_869506.1 5749128 R 243090 CDS NP_869507.1 32476513 1792690 complement(5752771..5753001) 1 NC_005027.1 hypothetical protein 5753001 1792690 RB10593 Rhodopirellula baltica SH 1 hypothetical protein NP_869507.1 5752771 R 243090 CDS NP_869508.1 32476514 1794467 complement(5752935..5755793) 1 NC_005027.1 best DB hits: BLAST: pir:T49425; hypothetical protein B17C10.60 [imported] - Neurospora; E=0.0 embl:CAA87818.1; (Z47815) unknown [Saccharomyces cerevisiae]; E=0.0 embl:CAA96728.1; (Z72549) ORF YGL027c [Saccharomyces cerevisiae]; E=7e-06 PFAM: PF00452; Apoptosis regulator proteins, B; E=0.0068; hypothetical protein 5755793 1794467 RB10595 Rhodopirellula baltica SH 1 hypothetical protein NP_869508.1 5752935 R 243090 CDS NP_869509.1 32476515 1795023 complement(5755604..5756743) 1 NC_005027.1 hypothetical protein 5756743 1795023 RB10596 Rhodopirellula baltica SH 1 hypothetical protein NP_869509.1 5755604 R 243090 CDS NP_869510.1 32476516 1794777 complement(5756796..5758457) 1 NC_005027.1 PMID: 20233298 best DB hits: BLAST: gb:AAF30402.1; AF109924_1 (AF109924) sulfatase 1 precursor [Helix; E=8e-37 gb:AAF49287.1; (AE003522) CG7402 gene product [Drosophila; E=2e-29 gb:AAA51779.1; (M32373) arylsulfatase B precursor [Homo sapiens]; E=3e-29 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=6e-26 PFAM: PF00884; Sulfatase; E=2e-35; sulfatase 1 precursor 5758457 arsB 1794777 arsB Rhodopirellula baltica SH 1 sulfatase 1 precursor NP_869510.1 5756796 R 243090 CDS NP_869511.1 32476517 1796974 complement(5758512..5758793) 1 NC_005027.1 hypothetical protein 5758793 1796974 RB10601 Rhodopirellula baltica SH 1 hypothetical protein NP_869511.1 5758512 R 243090 CDS NP_869512.1 32476518 1796915 5758745..5759563 1 NC_005027.1 best DB hits: BLAST: embl:CAB94996.1; (AJ278464) annexin A11 [Homo sapiens]; E=0.20 ref:XP_005688.1; annexin XI [Homo sapiens]; E=0.56; signal peptide 5759563 1796915 RB10603 Rhodopirellula baltica SH 1 signal peptide NP_869512.1 5758745 D 243090 CDS NP_869513.1 32476519 1793239 complement(5759537..5759926) 1 NC_005027.1 hypothetical protein 5759926 1793239 RB10607 Rhodopirellula baltica SH 1 hypothetical protein NP_869513.1 5759537 R 243090 CDS NP_869514.1 32476520 1793346 5759903..5761276 1 NC_005027.1 PMID: 11292750 best DB hits: BLAST: swissprot:P03835; YI41_ECOLI INSERTION ELEMENT IS4 HYPOTHETICAL; E=0.030 embl:CAA57483.1; (X81894) ORF [Enterobacter agglomerans]; E=0.064 COG: yi41; COG3385 Predicted transposase; E=0.003; transposase insG for insertion sequence element IS4 5761276 1793346 RB10608 Rhodopirellula baltica SH 1 transposase insG for insertion sequence element IS4 NP_869514.1 5759903 D 243090 CDS NP_869515.1 32476521 1792439 5761454..5762932 1 NC_005027.1 PMID: 8244397 PMID: 8325651 best DB hits: BLAST: gb:AAA16877.1; (L13329) iduronate-2-sulfatase [Homo sapiens]; E=1e-39 gb:AAB33747.1; iduronate-2-sulfatase, IDS {EC 3.1.6.13} [human,; E=6e-39 gb:AAA37880.1; (L07921) iduronate sulfatase [Mus musculus]; E=6e-37 COG: PA0031; COG3119 Arylsulfatase A and related enzymes; E=2e-28 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=1e-08 VNG0061C; COG3119 Arylsulfatase A and related enzymes; E=2e-08 PFAM: PF00884; Sulfatase; E=5.7e-22; iduronate-2-sulfatase 5762932 1792439 RB10612 Rhodopirellula baltica SH 1 iduronate-2-sulfatase NP_869515.1 5761454 D 243090 CDS NP_869516.1 32476522 1791901 complement(5763239..5764348) 1 NC_005027.1 PMID: 11157937 PMID: 11481430 best DB hits: BLAST: swissprot:Q9R9N0; LPSD_RHIME LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS; E=4e-17 swissprot:Q9R9N1; LPSE_RHIME LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS; E=2e-16 ddbj:BAB07431.1; (AP001519) BH3712~unknown conserved protein; E=3e-14 COG: DR0713; COG0438 Predicted glycosyltransferases; E=3e-17 PFAM: PF00534; Glycosyl transferases group 1; E=1e-30; lipopolysaccharide core biosynthesis glycosyl transferase lpsD 5764348 1791901 RB10614 Rhodopirellula baltica SH 1 lipopolysaccharide core biosynthesis glycosyl transferase lpsD NP_869516.1 5763239 R 243090 CDS NP_869517.1 32476523 1790875 complement(5764381..5766285) 1 NC_005027.1 PMID: 9278503 PMID: 3038546 best DB hits: BLAST: ddbj:BAB04209.1; (AP001508) altronate hydrolase [Bacillus; E=6e-65 gb:AAG58224.1; AE005539_1 (AE005539) altronate hydrolase; E=2e-64 swissprot:P42604; UXAA_ECOLI ALTRONATE HYDROLASE (ALTRONIC ACID; E=2e-63 COG: BH0490; COG2721 Altronate dehydratase; E=6e-66; altronate hydrolase 5766285 1790875 RB10616 Rhodopirellula baltica SH 1 altronate hydrolase NP_869517.1 5764381 R 243090 CDS NP_869518.1 32476524 1795467 5766160..5767401 1 NC_005027.1 PMID: 3002435 PMID: 8144675 best DB hits: BLAST: ddbj:BAB06189.1; (AP001515) succinyl-CoA synthetase (beta; E=1e-101 swissprot:P80886; SUCC_BACSU SUCCINYL-COA SYNTHETASE BETA CHAIN; E=5e-99 pir:H82120; succinyl-CoA synthase, beta chain VC2085 [imported] -; E=8e-91 COG: BH2470; COG0045 Succinyl-CoA synthetase beta subunit; E=1e-102 PFAM: PF02222; ATP-grasp domain; E=1.7e-37 PF00549; CoA-ligase; E=1.3e-66; succinyl-CoA synthetase subunit beta 5767401 sucC 1795467 sucC Rhodopirellula baltica SH 1 succinyl-CoA synthetase subunit beta NP_869518.1 5766160 D 243090 CDS NP_869519.1 32476525 1791861 5767521..5768393 1 NC_005027.1 PMID: 3002435 PMID: 2548486 PMID: 8144675 best DB hits: BLAST: embl:CAA54877.1; (X77919) succinyl-CoA synthetase alpha; E=3e-91 swissprot:P53591; SUCD_COXBU SUCCINYL-COA SYNTHETASE ALPHA CHAIN; E=5e-91 swissprot:P07459; SUCD_ECOLI SUCCINYL-COA SYNTHETASE ALPHA CHAIN; E=5e-90 COG: sucD; COG0074 succinyl-CoA synthetase subunit alpha; E=5e-91 PFAM: PF00549; CoA-ligase; E=4.1e-64; succinyl-CoA synthetase subunit alpha 5768393 sucD 1791861 sucD Rhodopirellula baltica SH 1 succinyl-CoA synthetase subunit alpha NP_869519.1 5767521 D 243090 CDS NP_869520.1 32476526 1794398 complement(5768412..5768561) 1 NC_005027.1 hypothetical protein 5768561 1794398 RB10620 Rhodopirellula baltica SH 1 hypothetical protein NP_869520.1 5768412 R 243090 CDS NP_869521.1 32476527 1793140 complement(5768572..5768916) 1 NC_005027.1 hypothetical protein 5768916 1793140 RB10621 Rhodopirellula baltica SH 1 hypothetical protein NP_869521.1 5768572 R 243090 CDS NP_869522.1 32476528 1795351 complement(5768958..5769140) 1 NC_005027.1 hypothetical protein 5769140 1795351 RB10623 Rhodopirellula baltica SH 1 hypothetical protein NP_869522.1 5768958 R 243090 CDS NP_869523.1 32476529 1790905 5769148..5769429 1 NC_005027.1 PMID: 98386497 best DB hits: BLAST: gb:AAC36499.1; (U45241) GroESHSP10 homolog [Lawsonia; E=1e-21 ddbj:BAA19726.1; (D88802) groES [Bacillus subtilis] -----; E=2e-21 swissprot:P26210; CH10_BACP3 10 KD CHAPERONIN (PROTEIN CPN10); E=4e-21 COG: BS_groES; COG0234 Co-chaperonin GroES (HSP10); E=2e-22 PFAM: PF00166; Chaperonin 10 Kd subunit; E=6.3e-47; molecular chaperone GroES 5769429 groES 1790905 groES Rhodopirellula baltica SH 1 molecular chaperone GroES NP_869523.1 5769148 D 243090 CDS NP_869524.1 32476530 1794215 5769500..5771119 1 NC_005027.1 PMID: 8808920 best DB hits: BLAST: gb:AAD37976.1; AF145252_2 (AF145252) heat shock protein GroEL; E=1e-165 swissprot:P77829; CH61_BRAJA 60 KD CHAPERONIN 1 (PROTEIN CPN60 1); E=1e-165 gb:AAC36500.1; (U45241) GroELHSP60 homolog [Lawsonia; E=1e-162 COG: CPn0134; COG0459 Chaperonin GroEL (HSP60 family); E=1e-162 PFAM: PF00118; TCP-1/cpn60 chaperonin family; E=3.5e-219; molecular chaperone GroEL 5771119 groEL 1794215 groEL Rhodopirellula baltica SH 1 molecular chaperone GroEL NP_869524.1 5769500 D 243090 CDS NP_869525.1 32476531 1793839 5771116..5771277 1 NC_005027.1 hypothetical protein 5771277 1793839 RB10630 Rhodopirellula baltica SH 1 hypothetical protein NP_869525.1 5771116 D 243090 CDS NP_869526.1 32476532 1790867 5771311..5772474 1 NC_005027.1 PMID: 11258796 old EC_number=1.14.1.- best DB hits: BLAST: pir:G70946; probable dioxygenase (EC 1.14.-.-) Rieske iron-sulfur; E=4e-17 ddbj:BAA15597.1; (D90823) Benzene 1,2-dioxygenase a subunit (EC; E=2e-15 swissprot:P76253; YEAW_ECOLI DIOXYGENASE ALPHA SUBUNIT; E=2e-15 COG: Rv3161c; COG2146 Ferredoxin subunits of nitrite reductase and; E=3e-18 PFAM: PF00355; Rieske [2Fe-2S] domain; E=4.6e-17; dioxygenase alpha subunit yeaW 5772474 1790867 RB10631 Rhodopirellula baltica SH 1 dioxygenase alpha subunit yeaW NP_869526.1 5771311 D 243090 CDS NP_869527.1 32476533 1792935 5772471..5773010 1 NC_005027.1 hypothetical protein 5773010 1792935 RB10634 Rhodopirellula baltica SH 1 hypothetical protein NP_869527.1 5772471 D 243090 CDS NP_869528.1 32476534 1794185 5772967..5773164 1 NC_005027.1 hypothetical protein 5773164 1794185 RB10637 Rhodopirellula baltica SH 1 hypothetical protein NP_869528.1 5772967 D 243090 CDS NP_869529.2 161579026 1791027 5773547..5774329 1 NC_005027.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 5774329 rpsB 1791027 rpsB Rhodopirellula baltica SH 1 30S ribosomal protein S2 NP_869529.2 5773547 D 243090 CDS NP_869530.1 32476536 1792379 5774380..5775360 1 NC_005027.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 5775360 tsf 1792379 tsf Rhodopirellula baltica SH 1 elongation factor Ts NP_869530.1 5774380 D 243090 CDS NP_869531.1 32476537 1794991 complement(5775513..5776442) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB10039.1; (AB007727) Rab geranylgeranyltransferase, beta; E=5e-05 swissprot:P41992; PFTB_CAEEL PROBABLE PROTEIN FARNESYLTRANSFERASE; E=7e-05 swissprot:Q04903; PFTB_PEA PROTEIN FARNESYLTRANSFERASE BETA; E=0.005 PFAM: PF00432; Prenyltransferase and squalene ox; E=1.4e-08; beta-subunit of geranylgeranyltransferase or farnesyltransferase 5776442 1794991 RB10641 Rhodopirellula baltica SH 1 beta-subunit of geranylgeranyltransferase or farnesyltransferase NP_869531.1 5775513 R 243090 CDS NP_869532.1 32476538 1791272 complement(5776444..5778198) 1 NC_005027.1 PMID: 8158647 best DB hits: BLAST: pir:A81293; probable flagellar hook-associated protein Cj1466; E=8e-31 pir:G71853; flagellar hook-associated protein 1 (hap1) -; E=9e-29 gb:AAG61142.1; (AF333079) flagellar hook-associated protein 1; E=2e-28 COG: Cj1466; COG1256 Flagellar hook-associated protein; E=8e-32 PFAM: PF00460; Flagella basal body rod protein; E=7.7e-08; flagellar hook-associated protein 5778198 flgK 1791272 flgK Rhodopirellula baltica SH 1 flagellar hook-associated protein NP_869532.1 5776444 R 243090 CDS NP_869533.1 32476539 1792609 complement(5778228..5779160) 1 NC_005027.1 hypothetical protein 5779160 1792609 RB10648 Rhodopirellula baltica SH 1 hypothetical protein NP_869533.1 5778228 R 243090 CDS NP_869534.1 32476540 1794752 5779234..5780457 1 NC_005027.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 5780457 trpB 1794752 trpB Rhodopirellula baltica SH 1 tryptophan synthase subunit beta NP_869534.1 5779234 D 243090 CDS NP_869535.1 32476541 1793005 5780554..5781579 1 NC_005027.1 PMID: 10660060 best DB hits: BLAST: gb:AAD55584.1; (AF077869) C-methyltransferase [Streptomyces; E=4e-09 gb:AAG15232.1; AF288602_4 (AF288602) CrtF [Chloroflexus; E=4e-07 pir:T34921; probable methyltransferase - Streptomyces coelicolor; E=2e-06 COG: Rv0089; COG0500 SAM-dependent methyltransferases; E=7e-04 DR2405; COG2226 Methylase involved in ubiquinone/menaquinone; E=0.002; C-methyltransferase 5781579 1793005 RB10652 Rhodopirellula baltica SH 1 C-methyltransferase NP_869535.1 5780554 D 243090 CDS NP_869536.1 32476542 1796808 5781576..5782817 1 NC_005027.1 best DB hits: BLAST: gb:AAK05889.1; AE006408_13 (AE006408) conserved hypothetical; E=2e-16 pir:A72506; probable tRNA splicing protein SPL1 APE2023 - Aeropyrum; E=3e-17 pir:F65063; hypothetical protein b2810 - Escherichia coli (strain; E=8e-18 COG: BB0084; COG0520 Selenocysteine lyase; E=2e-13 yfhO; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; E=1e-14 BS_ycbU; COG0520 Selenocysteine lyase; E=2e-15 PFAM: PF00266; Aminotransferase class-V; E=1.5e-05; nifS protein 5782817 nifS 1796808 nifS Rhodopirellula baltica SH 1 nifS protein NP_869536.1 5781576 D 243090 CDS NP_869537.1 32476543 1793588 5782824..5783363 1 NC_005027.1 PMID: 10480925 PMID: 10205156 best DB hits: BLAST: swissprot:Q9WZK0; COAD_THEMA PHOSPHOPANTETHEINE; E=1e-27 ddbj:BAB06308.1; (AP001516) pantetheine-phosphate; E=1e-27 swissprot:Q55235; COAD_SYNP7 PHOSPHOPANTETHEINE; E=1e-27 COG: TM0741; COG0669 Phosphopantetheine adenylyltransferase; E=1e-28 VNG0301C; COG1056 Nicotinamide mononucleotide adenylyltransferase; E=0.003 aq_1368; COG0615 Predicted cytidylyltransferases; E=0.005 PFAM: PF01467; Cytidylyltransferase; E=3.7e-32; phosphopantetheine adenylyltransferase 5783363 coaD 1793588 coaD Rhodopirellula baltica SH 1 phosphopantetheine adenylyltransferase NP_869537.1 5782824 D 243090 CDS NP_869538.1 32476544 1795302 5783360..5784292 1 NC_005027.1 best DB hits: BLAST: pir:G83352; transcriptional regulator MtlR PA2337 [imported] -; E=1e-09 pir:S52856; AraC-like protein - Azorhizobium caulinodans -----; E=1e-08 gb:AAF43900.1; (U20115) adpA-like protein [Mycobacterium; E=2e-08 COG: PA2337; COG2207 AraC-type DNA-binding domain-containing proteins; E=1e-10 BS_adaA; COG2169 Adenosine deaminase; E=1e-05 araC; COG2207 AraC-type DNA-binding domain-containing proteins; E=1e-05 PFAM: PF00165; Bacterial regulatory helix-turn-heli; E=1.4e-21; transcriptional regulator 5784292 1795302 RB10655 Rhodopirellula baltica SH 1 transcriptional regulator NP_869538.1 5783360 D 243090 CDS NP_869539.1 32476545 1792118 complement(5784251..5784517) 1 NC_005027.1 hypothetical protein 5784517 1792118 RB10656 Rhodopirellula baltica SH 1 hypothetical protein NP_869539.1 5784251 R 243090 CDS NP_869540.1 32476546 1792999 complement(5784704..5784823) 1 NC_005027.1 hypothetical protein 5784823 1792999 RB10657 Rhodopirellula baltica SH 1 hypothetical protein NP_869540.1 5784704 R 243090 CDS NP_869541.1 32476547 1794183 complement(5784820..5788650) 1 NC_005027.1 best DB hits: BLAST: pir:H69818; conserved hypothetical protein yhaN - Bacillus subtilis; E=2e-07 ddbj:BAB05865.1; (AP001514) BH2146~unknown conserved protein; E=0.002 pir:S56387; hypothetical protein f1107 - Escherichia coli -----; E=0.004 COG: BH2146; COG1511 Predicted membrane protein; E=2e-04 yjeP; COG3264 Small-conductance mechanosensitive channel; E=4e-04 PFAM: PF00005; ABC transporter; E=0.1; hypothetical protein 5788650 yahN 1794183 yahN Rhodopirellula baltica SH 1 hypothetical protein NP_869541.1 5784820 R 243090 CDS NP_869542.1 32476548 1790189 complement(5788593..5789888) 1 NC_005027.1 best DB hits: BLAST: pir:A69819; probable phosphoesterase (EC 3.1.-.-) yhaO - Bacillus; E=3e-31 pir:E75103; DNA repair protein rad32 (rad32) PAB0811 - Pyrococcus; E=6e-07 gb:AAG60901.1; AF322013_20 (AF322013) ID473 [Bradyrhizobium; E=1e-05 COG: BS_yhaO; COG0420 DNA repair exonuclease; E=3e-32 PFAM: PF02549; DNA repair exonuclease; E=5.9e-18; phosphoesterase yhaO- DNA repair exonuclease 5789888 1790189 RB10663 Rhodopirellula baltica SH 1 phosphoesterase yhaO- DNA repair exonuclease NP_869542.1 5788593 R 243090 CDS NP_869543.1 32476549 1790971 5789912..5790514 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB03764.1; (AP001507) signal peptidase-like protein; E=0.87; hypothetical protein 5790514 1790971 RB10665 Rhodopirellula baltica SH 1 hypothetical protein NP_869543.1 5789912 D 243090 CDS NP_869544.1 32476550 1790495 complement(5790485..5796394) 1 NC_005027.1 best DB hits: BLAST: pir:F69009; probable membrane protein MTH1074 - Methanobacterium; E=1e-114 embl:CAA48444.1; (X68367) ORF5' [Methanobacterium; E=9e-18 pir:S30585; hypothetical protein 5 - Methanobacterium thermoformicicum; E=6e-17 PFAM: PF01345; Domain of unknown function DUF11; E=0.007; hypothetical protein 5796394 1790495 RB10666 Rhodopirellula baltica SH 1 hypothetical protein NP_869544.1 5790485 R 243090 CDS NP_869545.1 32476551 1790939 complement(5796352..5796528) 1 NC_005027.1 hypothetical protein 5796528 1790939 RB10668 Rhodopirellula baltica SH 1 hypothetical protein NP_869545.1 5796352 R 243090 CDS NP_869546.1 32476552 1793101 complement(5796491..5798362) 1 NC_005027.1 best DB hits: BLAST: pir:B83531; hypothetical protein PA0924 [imported] - Pseudomonas; E=1e-12 pir:D82055; conserved hypothetical protein VC2600 [imported] -; E=7e-06 gb:AAK03767.1; (AE006205) unknown [Pasteurella multocida]; E=0.12 COG: PA0924; COG3083 Predicted hydrolase of alkaline phosphatase; E=1e-13; hypothetical protein 5798362 1793101 RB10670 Rhodopirellula baltica SH 1 hypothetical protein NP_869546.1 5796491 R 243090 CDS NP_869547.1 32476553 1793628 complement(5798359..5798598) 1 NC_005027.1 hypothetical protein 5798598 1793628 RB10672 Rhodopirellula baltica SH 1 hypothetical protein NP_869547.1 5798359 R 243090 CDS NP_869548.1 32476554 1790749 complement(5798531..5799907) 1 NC_005027.1 best DB hits: BLAST: pir:S22614; hypothetical protein - Salmonella choleraesuis -----; E=9e-25; transmembrane protein 5799907 1790749 RB10673 Rhodopirellula baltica SH 1 transmembrane protein NP_869548.1 5798531 R 243090 CDS NP_869549.1 32476555 1794675 complement(5799904..5800080) 1 NC_005027.1 hypothetical protein 5800080 1794675 RB10674 Rhodopirellula baltica SH 1 hypothetical protein NP_869549.1 5799904 R 243090 CDS NP_869550.1 32476556 1794621 complement(5800168..5802507) 1 NC_005027.1 hypothetical protein 5802507 1794621 RB10675 Rhodopirellula baltica SH 1 hypothetical protein NP_869550.1 5800168 R 243090 CDS NP_869551.1 32476557 1796110 5802466..5802816 1 NC_005027.1 hypothetical protein 5802816 1796110 RB10678 Rhodopirellula baltica SH 1 hypothetical protein NP_869551.1 5802466 D 243090 CDS NP_869552.1 32476558 1796796 5802930..5804603 1 NC_005027.1 best DB hits: BLAST: pir:S00715; hypothetical protein - Calothrix sp ----- embl:; E=0.64; signal peptide 5804603 1796796 RB10679 Rhodopirellula baltica SH 1 signal peptide NP_869552.1 5802930 D 243090 CDS NP_869553.1 32476559 1794261 complement(5804628..5806019) 1 NC_005027.1 best DB hits: PFAM: PF00534; Glycosyl transferases group 1; E=0.001; hypothetical protein 5806019 1794261 RB10680 Rhodopirellula baltica SH 1 hypothetical protein NP_869553.1 5804628 R 243090 CDS NP_869554.1 32476560 1792700 complement(5805998..5807422) 1 NC_005027.1 signal peptide 5807422 1792700 RB10682 Rhodopirellula baltica SH 1 signal peptide NP_869554.1 5805998 R 243090 CDS NP_869555.1 32476561 1793018 5806079..5807173 1 NC_005027.1 best DB hits: BLAST: gb:AAK03171.1; (AE006150) unknown [Pasteurella multocida]; E=4e-48 embl:CAB63312.1; (AL133471) hypothetical protein SCC82.03c; E=5e-48 swissprot:P45672; NIR3_AZOBR NIFR3-LIKE PROTEIN ----- pir:; E=1e-46 COG: BH0097; COG0042 Predicted TIM-barrel enzymes, possibly; E=2e-47 yhdG; COG0042 Predicted TIM-barrel enzymes, possibly dehydrogenases,; E=1e-42 RP011; COG0042 Predicted TIM-barrel enzymes, possibly; E=3e-41 PFAM: PF01207; Uncharacterized protein family UPF00; E=3.3e-79; hypothetical protein 5807173 1793018 RB10683 Rhodopirellula baltica SH 1 hypothetical protein NP_869555.1 5806079 D 243090 CDS NP_869556.1 32476562 1795331 5807477..5807791 1 NC_005027.1 PMID: 12024217; hypothetical protein 5807791 1795331 RB10686 Rhodopirellula baltica SH 1 hypothetical protein NP_869556.1 5807477 D 243090 CDS NP_869557.1 32476563 1795583 complement(5807486..5807884) 1 NC_005027.1 hypothetical protein 5807884 1795583 RB10687 Rhodopirellula baltica SH 1 hypothetical protein NP_869557.1 5807486 R 243090 CDS NP_869558.1 32476564 1792264 5807769..5807960 1 NC_005027.1 hypothetical protein 5807960 1792264 RB10688 Rhodopirellula baltica SH 1 hypothetical protein NP_869558.1 5807769 D 243090 CDS NP_869559.1 32476565 1790049 complement(5807950..5808207) 1 NC_005027.1 hypothetical protein 5808207 1790049 RB10689 Rhodopirellula baltica SH 1 hypothetical protein NP_869559.1 5807950 R 243090 CDS NP_869560.1 32476566 1794105 complement(5808255..5809544) 1 NC_005027.1 best DB hits: BLAST: pir:T34936; hypothetical protein SC3F9.14 SC3F9.14 - Streptomyces; E=3e-83 pir:T36185; hypothetical protein SCE29.06c - Streptomyces coelicolor; E=2e-73 pir:B82537; phosphodiesterase-nucleotide pyrophosphatase precursor; E=0.094 COG: XF2599; COG1524 Uncharacterized proteins of the AP superfamily; E=0.009 PFAM: PF01663; Type I phosphodiesterase / nucle; E=0.18; hypothetical protein 5809544 1794105 RB10690 Rhodopirellula baltica SH 1 hypothetical protein NP_869560.1 5808255 R 243090 CDS NP_869561.1 32476567 1789909 5809698..5811395 1 NC_005027.1 PMID: 1447975 best DB hits: BLAST: embl:CAC01597.1; (AL391041) amino acid transport; E=1e-90 gb:AAF12563.1; AE001826_32 (AE001826) Na(+)-linked D-alanine; E=5e-81 ddbj:BAB07752.1; (AP001520) amino acid transporter [Bacillus; E=4e-46 COG: DRB0133; COG1115 Na+/alanine symporter; E=4e-82 PFAM: PF02497; Arterivirus glycoprotein; E=0.45 PF00746; Gram positive anchor; E=0.031 PF01235; Sodium:alanine symporter fami; E=5.2e-96; Na(+)-linked D-alanine glycine permease 5811395 dagA 1789909 dagA Rhodopirellula baltica SH 1 Na(+)-linked D-alanine glycine permease NP_869561.1 5809698 D 243090 CDS NP_869562.1 32476568 1794173 5811856..5812854 1 NC_005027.1 hypothetical protein 5812854 1794173 RB10696 Rhodopirellula baltica SH 1 hypothetical protein NP_869562.1 5811856 D 243090 CDS NP_869563.1 32476569 1790358 complement(5811978..5812436) 1 NC_005027.1 signal peptide 5812436 1790358 RB10697 Rhodopirellula baltica SH 1 signal peptide NP_869563.1 5811978 R 243090 CDS NP_869564.1 32476570 1793370 complement(5812573..5813025) 1 NC_005027.1 hypothetical protein 5813025 1793370 RB10698 Rhodopirellula baltica SH 1 hypothetical protein NP_869564.1 5812573 R 243090 CDS NP_869565.1 32476571 1794952 5812882..5813082 1 NC_005027.1 hypothetical protein 5813082 1794952 RB10699 Rhodopirellula baltica SH 1 hypothetical protein NP_869565.1 5812882 D 243090 CDS NP_869566.1 32476572 1793479 5813102..5813809 1 NC_005027.1 PMID: 8921895 best DB hits: BLAST: gb:AAK03054.1; (AE006136) TolQ [Pasteurella multocida]; E=3e-10 swissprot:P43768; TOLQ_HAEIN TOLQ PROTEIN ----- pir: I64064; E=7e-09 pir:PC4258; tolQ protein - Haemophilus influenzae (fragment) -----; E=2e-08 COG: HI0385; COG0811 Biopolymer transport proteins; E=7e-10 PFAM: PF01618; MotA/TolQ/ExbB proton channel famil; E=1.4e-18; TolQ 5813809 tolQ 1793479 tolQ Rhodopirellula baltica SH 1 TolQ NP_869566.1 5813102 D 243090 CDS NP_869567.1 32476573 1793595 5813809..5814297 1 NC_005027.1 PMID: 9781885 best DB hits: BLAST: pir:E82726; conserved hypothetical protein XF1080 [imported] -; E=0.007 swissprot:Q9ZHV9; EXD2_VIBCH BIOPOLYMER TRANSPORT EXBD2 PROTEIN; E=0.043 pir:B82858; biopolymer transport ExbD1 protein XF0011 [imported] -; E=0.16 COG: XF1080; COG0848 Biopolymer transport protein; E=7e-04 PFAM: PF02472; Biopolymer transport protein ExbD/To; E=5.3e-06; biopolymer transport exbD2 protein 5814297 1793595 RB10702 Rhodopirellula baltica SH 1 biopolymer transport exbD2 protein NP_869567.1 5813809 D 243090 CDS NP_869568.1 32476574 1794720 5814372..5815151 1 NC_005027.1 PMID: 9140974 best DB hits: BLAST: embl:CAB50919.1; (AJ243354) hypothetical protein [Pseudomonas; E=4e-05 pir:F83274; conserved hypothetical protein PA2982 [imported] -; E=7e-05 swissprot:O06434; EXBD_NEIGO BIOPOLYMER TRANSPORT EXBD PROTEIN; E=0.001 COG: PA2982; COG0848 Biopolymer transport protein; E=7e-06 PFAM: PF02472; Biopolymer transport protein ExbD/; E=8.9e-08; biopolymer transport exbD protein 5815151 exbD 1794720 exbD Rhodopirellula baltica SH 1 biopolymer transport exbD protein NP_869568.1 5814372 D 243090 CDS NP_869569.1 32476575 1791214 5815264..5818653 1 NC_005027.1 best DB hits: BLAST: pir:H69064; serinethreonine protein kinase related protein -; E=0.045 COG: MTH1485; COG1520 Uncharacterized proteins of WD40-like repeat family; E=0.004 PFAM: PF01011; PQQ enzyme repeat; E=0.009; serine/threonine protein kinase related protein- PQQ-dependent oxidoreductase 5818653 1791214 RB10706 Rhodopirellula baltica SH 1 serine/threonine protein kinase related protein- PQQ-dependent oxidoreductase NP_869569.1 5815264 D 243090 CDS NP_869570.1 32476576 1791124 5818659..5821040 1 NC_005027.1 best DB hits: BLAST: ddbj:BAA15142.1; (D90789) Periplasmic dipeptide transport protein; E=0.15 swissprot:P76128; YDDS_ECOLI BINDING PROTEIN YDDS; E=0.15 gb:AAG56282.1; AE005357_2 (AE005357) hemin-binding; E=0.15; periplasmic dipeptide transport protein precursor (dipeptide-binding protein) (DBP)- secreted, membrane associated or paryphoplasmic protein 5821040 1791124 RB10709 Rhodopirellula baltica SH 1 periplasmic dipeptide transport protein precursor (dipeptide-binding protein) (DBP)- secreted, membrane associated or paryphoplasmic protein NP_869570.1 5818659 D 243090 CDS NP_869571.1 32476577 1793135 5821022..5822908 1 NC_005027.1 signal peptide 5822908 1793135 RB10710 Rhodopirellula baltica SH 1 signal peptide NP_869571.1 5821022 D 243090 CDS NP_869572.1 32476578 1794855 complement(5822909..5825029) 1 NC_005027.1 PMID: 10407164 PMID: 10368271 best DB hits: BLAST: swissprot:O87703; DNLJ_BACST DNA LIGASE (POLYDEOXYRIBONUCLEOTIDE; E=1e-135 swissprot:O31498; DNLJ_BACSU DNA LIGASE (POLYDEOXYRIBONUCLEOTIDE; E=1e-135 swissprot:P15042; DNLJ_ECOLI DNA LIGASE (POLYDEOXYRIBONUCLEOTIDE; E=1e-133 COG: BS_yerG; COG0272 NAD-dependent DNA ligase (contains BRCT domain type; E=1e-136 lig; COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); E=1e-134 BH0649; COG0272 NAD-dependent DNA ligase (contains BRCT domain type; E=1e-134 PFAM: PF01653; NAD-dependent DNA ligase; E=4.3e-103 PF00633; Helix-hairpin-helix motif.; E=0.3 PF00533; BRCA1 C Terminus (BRCT) domain; E=9.8e-16; DNA ligase 5825029 ligA 1794855 ligA Rhodopirellula baltica SH 1 DNA ligase NP_869572.1 5822909 R 243090 CDS NP_869573.1 32476579 1794827 5824976..5825230 1 NC_005027.1 hypothetical protein 5825230 1794827 RB10712 Rhodopirellula baltica SH 1 hypothetical protein NP_869573.1 5824976 D 243090 CDS NP_869574.1 32476580 1792714 complement(5825271..5825528) 1 NC_005027.1 signal peptide 5825528 1792714 RB10714 Rhodopirellula baltica SH 1 signal peptide NP_869574.1 5825271 R 243090 CDS NP_869575.1 32476581 1790848 complement(5825657..5827027) 1 NC_005027.1 PMID: 11932238 best DB hits: BLAST: pir:C82804; conserved hypothetical protein XF0464 [imported] -; E=0.10 swissprot:Q9Z4J7; EXAA_PSEAE QUINOPROTEIN ETHANOL DEHYDROGENASE; E=0.29 pdb:1FLG; A Chain A, Crystal Structure Of The Quinoprotein Ethanol; E=0.29 COG: XF0464; COG1520 Uncharacterized proteins of WD40-like repeat family; E=0.009 PFAM: PF01011; PQQ enzyme repeat; E=0.0088; PQQ-dependent dehydrogenase 5827027 1790848 RB10716 Rhodopirellula baltica SH 1 PQQ-dependent dehydrogenase NP_869575.1 5825657 R 243090 CDS NP_869576.1 32476582 1790289 complement(5827069..5827251) 1 NC_005027.1 hypothetical protein 5827251 1790289 RB10719 Rhodopirellula baltica SH 1 hypothetical protein NP_869576.1 5827069 R 243090 CDS NP_869577.1 32476583 1795427 5827264..5830629 1 NC_005027.1 best DB hits: BLAST: pir:S56387; hypothetical protein f1107 - Escherichia coli -----; E=9e-35 swissprot:P39285; YJEP_ECOLI HYPOTHETICAL 123.8 KD PROTEIN IN; E=2e-34 gb:AAG59358.1; AE005649_3 (AE005649) periplasmic binding; E=2e-34 COG: yjeP; COG3264 Small-conductance mechanosensitive channel; E=2e-35 PA1408_2; COG0668 Small-conductance mechanosensitive channel; E=2e-15 PFAM: PF00924; Uncharacterized protein famil; E=2.9e-36; transmembrane channel protein 5830629 1795427 RB10721 Rhodopirellula baltica SH 1 transmembrane channel protein NP_869577.1 5827264 D 243090 CDS NP_869578.1 32476584 1793416 5830775..5831605 1 NC_005027.1 PMID: 97094642 best DB hits: BLAST: ddbj:BAB05909.1; (AP001514) manganese-containing catalase; E=3e-62 swissprot:P80878; GS80_BACSU GENERAL STRESS PROTEIN 80 (GSP80); E=1e-61 pir:C69854; conserved hypothetical protein yjqC - Bacillus subtilis; E=2e-56; manganese-containing catalase 5831605 1793416 RB10727 Rhodopirellula baltica SH 1 manganese-containing catalase NP_869578.1 5830775 D 243090 CDS NP_869579.1 32476585 1796887 5831649..5832047 1 NC_005027.1 signal peptide 5832047 1796887 RB10728 Rhodopirellula baltica SH 1 signal peptide NP_869579.1 5831649 D 243090 CDS NP_869580.1 32476586 1794497 5832028..5832246 1 NC_005027.1 hypothetical protein 5832246 1794497 RB10729 Rhodopirellula baltica SH 1 hypothetical protein NP_869580.1 5832028 D 243090 CDS NP_869581.1 32476587 1792395 5832453..5832590 1 NC_005027.1 hypothetical protein 5832590 1792395 RB10730 Rhodopirellula baltica SH 1 hypothetical protein NP_869581.1 5832453 D 243090 CDS NP_869582.1 32476588 1792673 5832569..5832682 1 NC_005027.1 hypothetical protein 5832682 1792673 RB10731 Rhodopirellula baltica SH 1 hypothetical protein NP_869582.1 5832569 D 243090 CDS NP_869583.1 32476589 1795573 5832679..5833848 1 NC_005027.1 PMID: 7926692 best DB hits: BLAST: swissprot:P47734; FADH_METMR GLUTATHIONE-DEPENDENT FORMALDEHYDE; E=1e-160 pir:A75593; alcohol dehydrogenase, zinc-containing - Deinococcus; E=1e-113 pir:B83373; probable alcohol dehydrogenase (Zn-dependent) PA2188; E=7e-84 COG: DRA0005; COG1063 Threonine dehydrogenase and related Zn-dependent; E=1e-114 sll0990; COG1062 Zn-dependent alcohol dehydrogenases, class III; E=7e-20 PFAM: PF00107; Zinc-binding dehydrogenases; E=3e-74; glutathione-dependent formaldehyde dehydrogenase 5833848 fdh 1795573 fdh Rhodopirellula baltica SH 1 glutathione-dependent formaldehyde dehydrogenase NP_869583.1 5832679 D 243090 CDS NP_869584.1 32476590 1790075 5833947..5834780 1 NC_005027.1 signal peptide 5834780 1790075 RB10734 Rhodopirellula baltica SH 1 signal peptide NP_869584.1 5833947 D 243090 CDS NP_869585.1 32476591 1795933 5834722..5835720 1 NC_005027.1 hypothetical protein 5835720 1795933 RB10735 Rhodopirellula baltica SH 1 hypothetical protein NP_869585.1 5834722 D 243090 CDS NP_869586.1 32476592 1793149 complement(5835783..5835983) 1 NC_005027.1 hypothetical protein 5835983 1793149 RB10736 Rhodopirellula baltica SH 1 hypothetical protein NP_869586.1 5835783 R 243090 CDS NP_869587.1 32476593 1793088 complement(5836025..5836372) 1 NC_005027.1 hypothetical protein 5836372 1793088 RB10740 Rhodopirellula baltica SH 1 hypothetical protein NP_869587.1 5836025 R 243090 CDS NP_869588.1 32476594 1790154 complement(5836327..5836653) 1 NC_005027.1 hypothetical protein 5836653 1790154 RB10741 Rhodopirellula baltica SH 1 hypothetical protein NP_869588.1 5836327 R 243090 CDS NP_869589.1 32476595 1795931 complement(5836632..5836955) 1 NC_005027.1 hypothetical protein 5836955 1795931 RB10742 Rhodopirellula baltica SH 1 hypothetical protein NP_869589.1 5836632 R 243090 CDS NP_869590.1 32476596 1794308 5836648..5836938 1 NC_005027.1 hypothetical protein 5836938 1794308 RB10743 Rhodopirellula baltica SH 1 hypothetical protein NP_869590.1 5836648 D 243090 CDS NP_869591.1 32476597 1793000 5837016..5837183 1 NC_005027.1 hypothetical protein 5837183 1793000 RB10745 Rhodopirellula baltica SH 1 hypothetical protein NP_869591.1 5837016 D 243090 CDS NP_869592.1 32476598 1792983 complement(5837169..5838017) 1 NC_005027.1 hypothetical protein 5838017 1792983 RB10746 Rhodopirellula baltica SH 1 hypothetical protein NP_869592.1 5837169 R 243090 CDS NP_869593.1 32476599 1793414 5838000..5838227 1 NC_005027.1 hypothetical protein 5838227 1793414 RB10749 Rhodopirellula baltica SH 1 hypothetical protein NP_869593.1 5838000 D 243090 CDS NP_869594.1 32476600 1792975 complement(5838326..5838454) 1 NC_005027.1 hypothetical protein 5838454 1792975 RB10750 Rhodopirellula baltica SH 1 hypothetical protein NP_869594.1 5838326 R 243090 CDS NP_869595.1 32476601 1790500 5838430..5838561 1 NC_005027.1 hypothetical protein 5838561 1790500 RB10751 Rhodopirellula baltica SH 1 hypothetical protein NP_869595.1 5838430 D 243090 CDS NP_869596.1 32476602 1793940 complement(5838612..5838740) 1 NC_005027.1 hypothetical protein 5838740 1793940 RB10752 Rhodopirellula baltica SH 1 hypothetical protein NP_869596.1 5838612 R 243090 CDS NP_869597.1 32476603 1793988 5838793..5839371 1 NC_005027.1 hypothetical protein 5839371 1793988 RB10753 Rhodopirellula baltica SH 1 hypothetical protein NP_869597.1 5838793 D 243090 CDS NP_869598.1 32476604 1794606 5839301..5839483 1 NC_005027.1 hypothetical protein 5839483 1794606 RB10754 Rhodopirellula baltica SH 1 hypothetical protein NP_869598.1 5839301 D 243090 CDS NP_869599.1 32476605 1794862 complement(5839451..5839576) 1 NC_005027.1 hypothetical protein 5839576 1794862 RB10755 Rhodopirellula baltica SH 1 hypothetical protein NP_869599.1 5839451 R 243090 CDS NP_869600.1 32476606 1790184 complement(5839548..5842730) 1 NC_005027.1 hypothetical protein 5842730 1790184 RB10757 Rhodopirellula baltica SH 1 hypothetical protein NP_869600.1 5839548 R 243090 CDS NP_869601.1 32476607 1794329 complement(5842631..5844493) 1 NC_005027.1 hypothetical protein 5844493 1794329 RB10761 Rhodopirellula baltica SH 1 hypothetical protein NP_869601.1 5842631 R 243090 CDS NP_869602.1 32476608 1796864 complement(5844490..5844687) 1 NC_005027.1 hypothetical protein 5844687 1796864 RB10763 Rhodopirellula baltica SH 1 hypothetical protein NP_869602.1 5844490 R 243090 CDS NP_869603.1 32476609 1793016 complement(5844684..5845271) 1 NC_005027.1 hypothetical protein 5845271 1793016 RB10764 Rhodopirellula baltica SH 1 hypothetical protein NP_869603.1 5844684 R 243090 CDS NP_869604.1 32476610 1791108 5844819..5845508 1 NC_005027.1 hypothetical protein 5845508 1791108 RB10766 Rhodopirellula baltica SH 1 hypothetical protein NP_869604.1 5844819 D 243090 CDS NP_869605.1 32476611 1793710 complement(5845264..5846916) 1 NC_005027.1 PMID: 2642743 best DB hits: BLAST: swissprot:P19705; T1SE_ECOLI TYPE I RESTRICTION ENZYME ECOEI; E=5e-22 swissprot:P05719; T1SK_ECOLI TYPE I RESTRICTION ENZYME ECOKI; E=2e-18 swissprot:P06990; T1SB_ECOLI TYPE I RESTRICTION ENZYME ECOBI; E=1e-16 COG: hsdS; COG0732 Restriction endonuclease S subunits; E=1e-19 PFAM: PF01420; Type I restriction modification D; E=4.3e-18; type I restriction enzyme EcoEI specificity protein 5846916 hsdS 1793710 hsdS Rhodopirellula baltica SH 1 type I restriction enzyme EcoEI specificity protein NP_869605.1 5845264 R 243090 CDS NP_869606.1 32476612 1790327 complement(5846913..5848436) 1 NC_005027.1 PMID: 1409708 PMID: 3025838 best DB hits: BLAST: swissprot:P07989; T1M_SALPO TYPE I RESTRICTION ENZYME STYSPI M; E=1e-135 gb:AAA23985.1; (L02508) restriction-modification enzyme type I M; E=1e-134 swissprot:P08957; T1MK_ECOLI TYPE I RESTRICTION ENZYME ECOKI M; E=1e-134 COG: hsdM; COG0286 Type I restriction-modification system; E=1e-135 PFAM: PF02506; Type I restriction modification s; E=0.00016 PF02384; N-6 DNA Methylase; E=7.2e-40; type I restriction enzyme StySPI M protein 5848436 hsdM 1790327 hsdM Rhodopirellula baltica SH 1 type I restriction enzyme StySPI M protein NP_869606.1 5846913 R 243090 CDS NP_869607.1 32476613 1791501 complement(5848458..5851874) 1 NC_005027.1 restriction endonuclease; the EcoKI enzyme recognizes 5'-AACN(6)GTGC-3'; subunit R is required for both nuclease and ATPase activities; type I restriction enzyme EcoKI subunit R 5851874 hsdR 1791501 hsdR Rhodopirellula baltica SH 1 type I restriction enzyme EcoKI subunit R NP_869607.1 5848458 R 243090 CDS NP_869608.1 32476614 1796923 5851969..5852352 1 NC_005027.1 hypothetical protein 5852352 1796923 RB10772 Rhodopirellula baltica SH 1 hypothetical protein NP_869608.1 5851969 D 243090 CDS NP_869609.1 32476615 1790832 5852378..5852968 1 NC_005027.1 hypothetical protein 5852968 1790832 RB10774 Rhodopirellula baltica SH 1 hypothetical protein NP_869609.1 5852378 D 243090 CDS NP_869610.1 32476616 1795886 5852981..5853157 1 NC_005027.1 hypothetical protein 5853157 1795886 RB10775 Rhodopirellula baltica SH 1 hypothetical protein NP_869610.1 5852981 D 243090 CDS NP_869611.1 32476617 1790156 complement(5853194..5853529) 1 NC_005027.1 hypothetical protein 5853529 1790156 RB10776 Rhodopirellula baltica SH 1 hypothetical protein NP_869611.1 5853194 R 243090 CDS NP_869612.1 32476618 1795588 complement(5853522..5855129) 1 NC_005027.1 best DB hits: BLAST: embl:CAC08270.1; (AL392146) ATP-binding protein; E=4e-28; ATP-binding protein 5855129 1795588 RB10778 Rhodopirellula baltica SH 1 ATP-binding protein NP_869612.1 5853522 R 243090 CDS NP_869613.1 32476619 1790979 complement(5855126..5855425) 1 NC_005027.1 hypothetical protein 5855425 1790979 RB10780 Rhodopirellula baltica SH 1 hypothetical protein NP_869613.1 5855126 R 243090 CDS NP_869614.1 32476620 1790458 complement(5855472..5856872) 1 NC_005027.1 hypothetical protein 5856872 1790458 RB10783 Rhodopirellula baltica SH 1 hypothetical protein NP_869614.1 5855472 R 243090 CDS NP_869615.1 32476621 1795303 complement(5857037..5858326) 1 NC_005027.1 best DB hits: PFAM: PF00589; Phage integrase; E=0.063; hypothetical protein 5858326 1795303 RB10785 Rhodopirellula baltica SH 1 hypothetical protein NP_869615.1 5857037 R 243090 CDS NP_869616.1 32476622 1795300 complement(5858568..5860031) 1 NC_005027.1 best DB hits: BLAST: pir:A72236; hypothetical protein TM1585 - Thermotoga maritima; E=8e-33 pir:B71162; hypothetical protein PH0495 - Pyrococcus horikoshii; E=6e-30 swissprot:Q44472; TUD4_AGRVI HYDROXYPYRUVATE REDUCTASE; E=5e-29 COG: TM1585; COG2379 glycerate kinase; E=8e-34; glycerate kinase 5860031 1795300 RB10787 Rhodopirellula baltica SH 1 glycerate kinase NP_869616.1 5858568 R 243090 CDS NP_869617.1 32476623 1795596 complement(5859980..5860573) 1 NC_005027.1 best DB hits: BLAST: pir:S75290; hypothetical protein sll1289 - Synechocystis sp. (strain; E=2e-50 pir:G70687; hypothetical protein Rv1732c - Mycobacterium; E=2e-41 gb:AAF87891.1; AC015447_1 (AC015447) Hypothetical protein; E=3e-37 COG: sll1289; COG0526 Thiol-disulfide isomerase and thioredoxins; E=2e-51 Rv2521; COG1225 Peroxiredoxins; E=4e-06 NMB1958; COG0526 Thiol-disulfide isomerase and thioredoxins; E=0.004 PFAM: PF00578; AhpC/TSA family; E=0.0023; alkyl hydroperoxide reductase 5860573 1795596 RB10789 Rhodopirellula baltica SH 1 alkyl hydroperoxide reductase NP_869617.1 5859980 R 243090 CDS NP_869618.1 32476624 1794774 complement(5860620..5861519) 1 NC_005027.1 PMID: 8075395 PMID: 8953047 PMID: 10493822 best DB hits: BLAST: gb:AAD04184.1; (L10036) unknown [Nostoc sp. PCC 7120]; E=2e-60 swissprot:Q05069; FABI_ANASP ENOYL-[ACYL-CARRIER-PROTEIN]; E=2e-60 pir:H81284; probable enoyl-[acyl-carrier-protein] reductase [NADH]; E=1e-55 COG: Cj1400c; COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH); E=9e-57 BH1511; COG1028 Dehydrogenases with different specificities (related; E=2e-16 BS_yhdF; COG1028 Dehydrogenases with different specificities; E=2e-15 PFAM: PF00106; short chain dehydrogenase; E=0.019 PF00678; Short chain dehydrogenase/reduct; E=2.3e-07; enoyl-ACP reductase 5861519 fabI 1794774 fabI Rhodopirellula baltica SH 1 enoyl-ACP reductase NP_869618.1 5860620 R 243090 CDS NP_869619.1 32476625 1793308 5861653..5863617 1 NC_005027.1 best DB hits: BLAST: pir:C83055; probable two-component response regulator PA4726; E=2e-58 gb:AAG59807.1; AF305914_2 (AF305914) HydG [Klebsiella oxytoca]; E=2e-58 pir:T08624; probable NtrC-type response regulator - Eubacterium; E=3e-58 COG: PA4726; COG2204 AAA superfamily ATPases with N-terminal receiver; E=2e-59 PA2359; COG1221 NtrC family transcriptional regulators, ATPase; E=2e-58 VC1926; COG2204 AAA superfamily ATPases with N-terminal receiver; E=2e-57 PFAM: PF01590; GAF domain; E=1.1e-13 PF00158; Sigma-54 interaction domain; E=1e-128; two-component response regulator 5863617 1793308 RB10793 Rhodopirellula baltica SH 1 two-component response regulator NP_869619.1 5861653 D 243090 CDS NP_869620.1 32476626 1790758 5863798..5864613 1 NC_005027.1 best DB hits: BLAST: pir:A71552; probable lysophospholipase esterase - Chlamydia; E=4e-08 pir:F81704; serine esterase, probable TC0413 [imported] - Chlamydia; E=6e-08 pir:D72098; serine esterase, probable CP0488 [imported] -; E=1e-06 COG: CT136; COG0400 Predicted esterase; E=4e-09 PFAM: PF02230; Phospholipase/Carboxylesterase; E=0.68; lysophospholipase esterase 5864613 1790758 RB10797 Rhodopirellula baltica SH 1 lysophospholipase esterase NP_869620.1 5863798 D 243090 CDS NP_869621.1 32476627 1790295 5864610..5867177 1 NC_005027.1 hypothetical protein 5867177 1790295 RB10799 Rhodopirellula baltica SH 1 hypothetical protein NP_869621.1 5864610 D 243090 CDS NP_869622.1 32476628 1790818 5867012..5869543 1 NC_005027.1 best DB hits: BLAST: embl:CAB37418.1; (AJ224978) ORF 245 [Salmonella typhimurium]; E=0.002 gb:AAG31761.1; (AF282268) unknown [Salmonella enterica serovar; E=0.23; transmembrane protein 5869543 1790818 RB10801 Rhodopirellula baltica SH 1 transmembrane protein NP_869622.1 5867012 D 243090 CDS NP_869623.1 32476629 1794353 5869621..5870781 1 NC_005027.1 PMID: 88038383 best DB hits: BLAST: swissprot:Q09669; ADHF_SCHPO IRON ALCOHOL DEHYDROGENASE; E=5e-46 gb:AAD43989.1; U59485_16 (U59485) AttL [Agrobacterium tumefaciens]; E=5e-45 gb:AAG58733.1; AE005585_7 (AE005585) oxidoreductase; E=6e-42 COG: yiaY; COG1454 Alcohol dehydrogenase IV; E=3e-42 PFAM: PF00465; Iron-containing alcohol dehydrogenas; E=3.3e-58; iron alcohol dehydrogenase 5870781 1794353 RB10805 Rhodopirellula baltica SH 1 iron alcohol dehydrogenase NP_869623.1 5869621 D 243090 CDS NP_869624.1 32476630 1792865 5870789..5871349 1 NC_005027.1 hypothetical protein 5871349 1792865 RB10806 Rhodopirellula baltica SH 1 hypothetical protein NP_869624.1 5870789 D 243090 CDS NP_869625.1 32476631 1790515 complement(5871407..5871757) 1 NC_005027.1 hypothetical protein 5871757 1790515 RB10808 Rhodopirellula baltica SH 1 hypothetical protein NP_869625.1 5871407 R 243090 CDS NP_869626.1 32476632 1796860 complement(5871764..5872048) 1 NC_005027.1 hypothetical protein 5872048 1796860 RB10810 Rhodopirellula baltica SH 1 hypothetical protein NP_869626.1 5871764 R 243090 CDS NP_869627.1 32476633 1794641 complement(5872089..5873717) 1 NC_005027.1 signal peptide 5873717 1794641 RB10814 Rhodopirellula baltica SH 1 signal peptide NP_869627.1 5872089 R 243090 CDS NP_869628.1 32476634 1795278 complement(5873941..5875071) 1 NC_005027.1 best DB hits: BLAST: pir:C75278; DNA polymerase III, taugamma subunit - Deinococcus; E=2e-23 gb:AAB82595.1; (AF025391) DNA polymerase III holoenzyme tau; E=4e-22 pir:A70460; DNA polymerase III gamma subunit - Aquifex aeolicus; E=9e-21 COG: DR2410; COG2812 DNA polymerase III, gamma/tau subunits; E=2e-24 NMB0769; COG0470 ATPase involved in DNA replication; E=1e-19 Cj1157; COG2812 DNA polymerase III, gamma/tau subunits; E=4e-18 PFAM: PF00448; SRP54-type protein, GTPase domain; E=0.64 PF00004; ATPase associated with vario; E=0.0033; DNA polymerase III, tau/gamma subunit 5875071 holB 1795278 holB Rhodopirellula baltica SH 1 DNA polymerase III, tau/gamma subunit NP_869628.1 5873941 R 243090 CDS NP_869629.1 32476635 1793250 complement(5875075..5875548) 1 NC_005027.1 PMID: 8576032 best DB hits: BLAST: ddbj:BAB07486.1; (AP001519) ribose 5-phosphate epimerase (pentose; E=3e-30 pir:H70397; ribose 5-phosphate isomerase B - Aquifex aeolicus; E=9e-29 embl:CAA07515.1; (AJ007446) hypothetical protein [Thermotoga; E=7e-27 COG: BH3767; COG0698 Ribose 5-phosphate isomerase RpiB; E=2e-31 PFAM: PF02502; Ribose/Galactose Isomerase; E=1.1e-35; ribose 5-phosphate epimerase (pentose phosphate) 5875548 rpiB 1793250 rpiB Rhodopirellula baltica SH 1 ribose 5-phosphate epimerase (pentose phosphate) NP_869629.1 5875075 R 243090 CDS NP_869630.1 32476636 1795541 complement(5875552..5876937) 1 NC_005027.1 PMID: 7798145 best DB hits: BLAST: swissprot:P39155; YWLE_BACSU LOW MOLECULAR WEIGHT; E=1e-13 swissprot:Q45408; EPSP_BURSO PROBABLE LOW MOLECULAR WEIGHT; E=3e-10 ddbj:BAB07488.1; (AP001519) protein-tyrosine-phosphatase; E=1e-09 COG: BS_ywlE; COG0394 Protein-tyrosine-phosphatase; E=1e-14 VC1079; COG0009 translation factor (SUA5); E=2e-06 BH2998; COG0394 Protein-tyrosine-phosphatase; E=8e-05 PFAM: PF01300; SUA5/yciO/yrdC family; E=0.14 PF01451; Low molecular weight phosphoty; E=2.2e-28; low molecular weight protein-tyrosine-phosphatase ywlE 5876937 1795541 RB10818 Rhodopirellula baltica SH 1 low molecular weight protein-tyrosine-phosphatase ywlE NP_869630.1 5875552 R 243090 CDS NP_869631.1 32476637 1790409 5876924..5877973 1 NC_005027.1 best DB hits: BLAST: swissprot:Q03601; YMB4_CAEEL HYPOTHETICAL 109.1 KDA PROTEIN; E=6e-23 ddbj:BAA83343.1; (AB030912) RING finger protein HAC1 [Mus; E=8e-16 gb:AAC17997.1; (AF036255) RING finger protein [Rattus norvegicus]; E=1e-15 PFAM: PF01436; NHL repeat; E=0.00042; ring finger protein HAC1 5877973 1790409 RB10820 Rhodopirellula baltica SH 1 ring finger protein HAC1 NP_869631.1 5876924 D 243090 CDS NP_869632.1 32476638 1791101 5877977..5878132 1 NC_005027.1 hypothetical protein 5878132 1791101 RB10821 Rhodopirellula baltica SH 1 hypothetical protein NP_869632.1 5877977 D 243090 CDS NP_869633.1 32476639 1793539 complement(5878083..5878859) 1 NC_005027.1 signal peptide 5878859 1793539 RB10823 Rhodopirellula baltica SH 1 signal peptide NP_869633.1 5878083 R 243090 CDS NP_869634.1 32476640 1790752 5878877..5878999 1 NC_005027.1 hypothetical protein 5878999 1790752 RB10824 Rhodopirellula baltica SH 1 hypothetical protein NP_869634.1 5878877 D 243090 CDS NP_869635.1 32476641 1795639 5878996..5879280 1 NC_005027.1 hypothetical protein 5879280 1795639 RB10825 Rhodopirellula baltica SH 1 hypothetical protein NP_869635.1 5878996 D 243090 CDS NP_869636.1 32476642 1791253 5879229..5879912 1 NC_005027.1 PMID: 9383193 best DB hits: BLAST: gb:AAD31002.1; AF127082_1 (AF127082) ATP-dependent protease; E=2e-52 swissprot:Q60107; CLPP_YEREN ATP-DEPENDENT CLP PROTEASE; E=1e-48 swissprot:Q9WZF9; CLPP_THEMA ATP-DEPENDENT CLP PROTEASE; E=1e-48 COG: TM0695; COG0740 Protease subunit of ATP-dependent Clp proteases; E=1e-49 PFAM: PF00574; Clp protease; E=5e-76; ATP-dependent Clp protease proteolytic subunit 5879912 clpP 1791253 clpP Rhodopirellula baltica SH 1 ATP-dependent Clp protease proteolytic subunit NP_869636.1 5879229 D 243090 CDS NP_869637.1 32476643 1791513 5879971..5880558 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: swissprot:Q9WZF9; CLPP_THEMA ATP-DEPENDENT CLP PROTEASE; E=7e-69 swissprot:Q60107; CLPP_YEREN ATP-DEPENDENT CLP PROTEASE; E=5e-68 ddbj:BAA94668.1; (AB033628) serine protease subunit [Salmonella; E=9e-68 COG: TM0695; COG0740 Protease subunit of ATP-dependent Clp proteases; E=7e-70 PFAM: PF00378; Enoyl-CoA hydratase/isomerase fa; E=0.064 PF00574; Clp protease; E=1.5e-111; ATP-dependent Clp protease proteolytic subunit 5880558 clpP 1791513 clpP Rhodopirellula baltica SH 1 ATP-dependent Clp protease proteolytic subunit NP_869637.1 5879971 D 243090 CDS NP_869638.1 32476644 1793205 5880714..5880980 1 NC_005027.1 hypothetical protein 5880980 1793205 RB10832 Rhodopirellula baltica SH 1 hypothetical protein NP_869638.1 5880714 D 243090 CDS NP_869639.1 32476645 1793620 complement(5881054..5883036) 1 NC_005027.1 PMID: 2121708 PMID: 10984043 best DB hits: BLAST: pir:B81175; argininosuccinate lyase NMB0637 [imported] - Neisseria; E=1e-110 pir:C81930; probable argininosuccinate lyase (EC 4.3.2.1) NMA0847; E=1e-110 swissprot:P50987; ARLY_PSEAE ARGININOSUCCINATE LYASE; E=1e-107 COG: NMB0637; COG0165 Argininosuccinate lyase; E=1e-111 PAB0829; COG0015 Adenylosuccinate lyase; E=5e-14 PFAM: PF00206; Lyase; E=3.2e-82; argininosuccinate lyase 5883036 argH 1793620 argH Rhodopirellula baltica SH 1 argininosuccinate lyase NP_869639.1 5881054 R 243090 CDS NP_869640.1 32476646 1793765 5882524..5885532 1 NC_005027.1 best DB hits: BLAST: gb:AAG17720.1; AF286114_1 (AF286114) PAK-like protein kinase; E=0.82; hypothetical protein 5885532 1793765 RB10835 Rhodopirellula baltica SH 1 hypothetical protein NP_869640.1 5882524 D 243090 CDS NP_869641.1 32476647 1794986 complement(5885632..5887179) 1 NC_005027.1 best DB hits: BLAST: pir:T36293; probable serinethreonine protein kinase - Streptomyces; E=0.15 gb:AAG20933.1; (AE005160) Vng6297c [Halobacterium sp. NRC-1]; E=0.24 pir:C82804; conserved hypothetical protein XF0464 [imported] -; E=0.56 PFAM: PF01011; PQQ enzyme repeat; E=0.045; serine/threonine protein kinase 5887179 1794986 RB10839 Rhodopirellula baltica SH 1 serine/threonine protein kinase NP_869641.1 5885632 R 243090 CDS NP_869642.1 32476648 1791173 5887124..5888455 1 NC_005027.1 PMID: 7860585 best DB hits: BLAST: pir:I39710; cellulose biosynthesis protein celD - Agrobacterium; E=4e-05 embl:CAB92279.1; (AL356595) hypothetical protein [Streptomyces; E=0.001 PFAM: PF02572; ATP:corrinoid adenosyltransfer; E=0.094; cellulose biosynthesis protein celD 5888455 celD 1791173 celD Rhodopirellula baltica SH 1 cellulose biosynthesis protein celD NP_869642.1 5887124 D 243090 CDS NP_869643.1 32476649 1790532 5888421..5889197 1 NC_005027.1 best DB hits: PFAM: PF00583; Acetyltransferase (GNAT) family; E=2.3e-12; signal peptide 5889197 1790532 RB10844 Rhodopirellula baltica SH 1 signal peptide NP_869643.1 5888421 D 243090 CDS NP_869644.1 32476650 1790130 complement(5889180..5890121) 1 NC_005027.1 hypothetical protein 5890121 1790130 RB10845 Rhodopirellula baltica SH 1 hypothetical protein NP_869644.1 5889180 R 243090 CDS NP_869645.1 32476651 1791779 complement(5890118..5890996) 1 NC_005027.1 hypothetical protein 5890996 1791779 RB10848 Rhodopirellula baltica SH 1 hypothetical protein NP_869645.1 5890118 R 243090 CDS NP_869646.1 32476652 1793624 complement(5890993..5891601) 1 NC_005027.1 hypothetical protein 5891601 1793624 RB10851 Rhodopirellula baltica SH 1 hypothetical protein NP_869646.1 5890993 R 243090 CDS NP_869647.1 32476653 1795561 complement(5891768..5893261) 1 NC_005027.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 5893261 gatB 1795561 gatB Rhodopirellula baltica SH 1 aspartyl/glutamyl-tRNA amidotransferase subunit B NP_869647.1 5891768 R 243090 CDS NP_869648.1 32476654 1794610 complement(5893328..5894194) 1 NC_005027.1 PMID: 9389475 best DB hits: BLAST: gb:AAB89497.1; (AE000982) lysophospholipase [Archaeoglobus; E=2e-10 pir:D69998; lysophospholipase homolog ytpA - Bacillus subtilis; E=1e-05 embl:CAA64113.1; (X94355) M5L [Cowpox virus] ----- embl:; E=2e-05 COG: AF1753; COG2267 Lysophospholipase; E=2e-11 PFAM: PF00561; alpha/beta hydrolase fold; E=6.7e-09; lysophospholipase 5894194 1794610 RB10853 Rhodopirellula baltica SH 1 lysophospholipase NP_869648.1 5893328 R 243090 CDS NP_869649.1 32476655 1795309 complement(5894191..5895378) 1 NC_005027.1 PMID: 8990288 best DB hits: BLAST: pir:H69855; chloromuconate cycloisomerase homolog ykfB - Bacillus; E=7e-22 pir:T51250; chloromuconate cycloisomerase homolog ykfB [imported] -; E=3e-19 ddbj:BAB06725.1; (AP001517) muconate cycloisomerase [Bacillus; E=3e-19 COG: BS_ykfB; COG1441 O-succinylbenzoate synthase and related enzymes; E=6e-23 PFAM: PF01188; Mandelate racemase / muconate; E=3.6e-27; muconate cycloisomerase I 5895378 1795309 RB10855 Rhodopirellula baltica SH 1 muconate cycloisomerase I NP_869649.1 5894191 R 243090 CDS NP_869650.1 32476656 1794297 complement(5895365..5896372) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:H83099; probable oxidoreductase PA4361 [imported] - Pseudomonas; E=3e-24 pir:T34919; oxidoreductase - Streptomyces coelicolor ----- embl:; E=3e-18 pir:E82632; NAD(P)H steroid dehydrogenase XF1825 [imported] -; E=9e-16 COG: PA4361; COG0451 Nucleoside-diphosphate-sugar epimerases; E=3e-25 slr0836; COG1088 dTDP-D-glucose 4,6-dehydratase; E=6e-04 Rv3784; COG0451 Nucleoside-diphosphate-sugar epimerases; E=0.004 PFAM: PF00106; short chain dehydrogenase; E=0.0018 PF01073; 3-beta hydroxysteroid dehydro; E=4.1e-08 PF01370; NAD dependent epimerase/dehyd; E=1.7e-06; oxidoreductase 5896372 1794297 RB10858 Rhodopirellula baltica SH 1 oxidoreductase NP_869650.1 5895365 R 243090 CDS NP_869651.1 32476657 1792632 complement(5896538..5896828) 1 NC_005027.1 hypothetical protein 5896828 1792632 RB10860 Rhodopirellula baltica SH 1 hypothetical protein NP_869651.1 5896538 R 243090 CDS NP_869652.1 32476658 1791573 5896851..5896991 1 NC_005027.1 hypothetical protein 5896991 1791573 RB10861 Rhodopirellula baltica SH 1 hypothetical protein NP_869652.1 5896851 D 243090 CDS NP_869653.1 32476659 1794828 5896997..5898142 1 NC_005027.1 PMID: 8316082 best DB hits: BLAST: swissprot:Q07833; WAPA_BACSU WALL-ASSOCIATED PROTEIN PRECURSOR; E=4e-09 pir:JS0625; rhsD protein - Escherichia coli ----- gb: AAA24544.1; E=1e-08 swissprot:P16919; RHSD_ECOLI RHSD PROTEIN PRECURSOR ----- pir:; E=1e-08 COG: BS_wapA; COG3209 Rhs family protein; E=4e-10; wall-associated protein 5898142 1794828 RB10862 Rhodopirellula baltica SH 1 wall-associated protein NP_869653.1 5896997 D 243090 CDS NP_869654.1 32476660 1795601 5898139..5899083 1 NC_005027.1 hypothetical protein 5899083 1795601 RB10864 Rhodopirellula baltica SH 1 hypothetical protein NP_869654.1 5898139 D 243090 CDS NP_869655.1 32476661 1791696 complement(5899043..5899291) 1 NC_005027.1 hypothetical protein 5899291 1791696 RB10866 Rhodopirellula baltica SH 1 hypothetical protein NP_869655.1 5899043 R 243090 CDS NP_869656.1 32476662 1791049 5899359..5899982 1 NC_005027.1 signal peptide 5899982 1791049 RB10867 Rhodopirellula baltica SH 1 signal peptide NP_869656.1 5899359 D 243090 CDS NP_869657.1 32476663 1794558 complement(5899920..5900330) 1 NC_005027.1 hypothetical protein 5900330 1794558 RB10868 Rhodopirellula baltica SH 1 hypothetical protein NP_869657.1 5899920 R 243090 CDS NP_869658.1 32476664 1794590 complement(5900233..5900871) 1 NC_005027.1 hypothetical protein 5900871 1794590 RB10871 Rhodopirellula baltica SH 1 hypothetical protein NP_869658.1 5900233 R 243090 CDS NP_869659.1 32476665 1793924 complement(5900865..5901032) 1 NC_005027.1 hypothetical protein 5901032 1793924 RB10874 Rhodopirellula baltica SH 1 hypothetical protein NP_869659.1 5900865 R 243090 CDS NP_869660.1 32476666 1795367 complement(5901043..5901192) 1 NC_005027.1 hypothetical protein 5901192 1795367 RB10875 Rhodopirellula baltica SH 1 hypothetical protein NP_869660.1 5901043 R 243090 CDS NP_869661.1 32476667 1792808 complement(5901251..5903770) 1 NC_005027.1 PMID: 12000953 best DB hits: BLAST: swissprot:Q9Z507; UVRA_STRCO EXCINUCLEASE ABC SUBUNIT A -----; E=1e-132 swissprot:O34863; UVRA_BACSU EXCINUCLEASE ABC SUBUNIT A -----; E=1e-131 swissprot:Q56242; UVRA_THETH EXCINUCLEASE ABC SUBUNIT A -----; E=1e-130 COG: BS_uvrA; COG0178 Excinuclease ATPase subunit; E=1e-132 PFAM: PF01443; Viral (Superfamily 1) RNA hel; E=0.46 PF00005; ABC transporter; E=0.2; excinuclease ABC subunit A 5903770 uvrA 1792808 uvrA Rhodopirellula baltica SH 1 excinuclease ABC subunit A NP_869661.1 5901251 R 243090 CDS NP_869662.1 32476668 1790440 complement(5903767..5905128) 1 NC_005027.1 best DB hits: PFAM: PF02517; CAAX amino terminal protease; E=0.2; hypothetical protein 5905128 1790440 RB10877 Rhodopirellula baltica SH 1 hypothetical protein NP_869662.1 5903767 R 243090 CDS NP_869663.1 32476669 1790674 complement(5905125..5905859) 1 NC_005027.1 PMID: 7750561 best DB hits: BLAST: ddbj:BAB06105.1; (AP001515) phosphatidylglycerophosphate synthase; E=7e-20 pir:I39950; pgsA protein - Bacillus subtilis ----- ddbj:; E=5e-16 swissprot:P46322; PGSA_BACSU; E=5e-15 COG: BH2386; COG0558 Phosphatidylglycerophosphate synthase; E=7e-21 PFAM: PF01066; CDP-alcohol phosphatidyltrans; E=1.1e-21; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 5905859 pgsA 1790674 pgsA Rhodopirellula baltica SH 1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase NP_869663.1 5905125 R 243090 CDS NP_869664.1 32476670 1791553 complement(5905907..5907340) 1 NC_005027.1 PMID: 9537320 best DB hits: BLAST: swissprot:O67016; Y849_AQUAE HYPOTHETICAL PROTEIN AQ_849 -----; E=1e-87 swissprot:Q55803; Y082_SYNY3 HYPOTHETICAL 49.4 KD PROTEIN SLR0082; E=4e-84 swissprot:P75802; YLIG_ECOLI HYPOTHETICAL 49.6 KDA PROTEIN IN; E=1e-76 COG: aq_849; COG0621 Fe-S oxidoreductases family 1; E=9e-89 PFAM: PF00919; Uncharacterized protein family UPF00; E=3.2e-35; 2-methylthioadenine synthetase 5907340 1791553 RB10880 Rhodopirellula baltica SH 1 2-methylthioadenine synthetase NP_869664.1 5905907 R 243090 CDS NP_869665.1 32476671 1793210 complement(5907337..5907645) 1 NC_005027.1 hypothetical protein 5907645 1793210 RB10881 Rhodopirellula baltica SH 1 hypothetical protein NP_869665.1 5907337 R 243090 CDS NP_869666.1 32476672 1796815 5907588..5909228 1 NC_005027.1 best DB hits: BLAST: swissprot:Q53638; SYK_STAAU LYSYL-TRNA SYNTHETASE (LYSINE--TRNA; E=1e-116 swissprot:P37477; SYK_BACSU LYSYL-TRNA SYNTHETASE (LYSINE--TRNA; E=1e-114 swissprot:Q9KGG4; SYK_BACHD LYSYL-TRNA SYNTHETASE (LYSINE--TRNA; E=1e-111 COG: BS_lysS; COG1190 Lysyl-tRNA synthetase class II; E=1e-115 PFAM: PF01336; OB-fold nucleic acid binding dom; E=5.9e-12 PF01409; tRNA synthetases class II (F); E=0.46 PF00152; tRNA synthetases class II (D, K; E=7e-136; lysyl-tRNA synthetase 5909228 lysS 1796815 lysS Rhodopirellula baltica SH 1 lysyl-tRNA synthetase NP_869666.1 5907588 D 243090 CDS NP_869667.1 32476673 1793306 complement(5909299..5909517) 1 NC_005027.1 hypothetical protein 5909517 1793306 RB10884 Rhodopirellula baltica SH 1 hypothetical protein NP_869667.1 5909299 R 243090 CDS NP_869668.1 32476674 1789897 complement(5909525..5909932) 1 NC_005027.1 signal peptide 5909932 1789897 RB10886 Rhodopirellula baltica SH 1 signal peptide NP_869668.1 5909525 R 243090 CDS NP_869669.1 32476675 1790282 complement(5909943..5911772) 1 NC_005027.1 PMID: 9163424 best DB hits: BLAST: swissprot:P74178; YB78_SYNY3 HYPOTHETICAL 69.1 KD PROTEIN SLL1178; E=1e-175 gb:AAK00162.1; AF222753_17 (AF222753) nodulation protein NolO; E=8e-78 swissprot:P55474; NOLO_RHISN NODULATION PROTEIN NOLNO -----; E=1e-76 COG: sll1178; COG2192 Predicted carbamoyl transferase, NodU family; E=1e-176 PFAM: PF02543; Carbamoyltransferase; E=4.4e-130; carbamyltransferase BlmD 5911772 1790282 RB10887 Rhodopirellula baltica SH 1 carbamyltransferase BlmD NP_869669.1 5909943 R 243090 CDS NP_869670.1 32476676 1795711 complement(5911782..5912018) 1 NC_005027.1 hypothetical protein 5912018 1795711 RB10890 Rhodopirellula baltica SH 1 hypothetical protein NP_869670.1 5911782 R 243090 CDS NP_869671.1 32476677 1790076 5911978..5912151 1 NC_005027.1 hypothetical protein 5912151 1790076 RB10891 Rhodopirellula baltica SH 1 hypothetical protein NP_869671.1 5911978 D 243090 CDS NP_869672.1 32476678 1796892 5912176..5914878 1 NC_005027.1 PMID: 8590279 best DB hits: BLAST: swissprot:P54148; Y537_SYNY3 AMMONIUM TRANSPORTER SLL0537; E=9e-88 swissprot:P54147; Y108_SYNY3 AMMONIUM TRANSPORTER SLL0108; E=1e-70 gb:AAB89503.1; (AE000982) ammonium transporter (amt-2); E=2e-66 COG: sll0537; COG0004 Ammonia permeases; E=8e-89 VC1084; COG0642 Sensory transduction histidine kinases; E=2e-33 MTH661; COG0004 Ammonia permeases; E=1e-32 PFAM: PF00909; Ammonium Transporter Family; E=1.9e-133 PF00512; His Kinase A (phosphoacceptor; E=6.1e-05 PF02518; Histidine kinase-, DNA gyrase; E=3.7e-25; ammonium transporter 5914878 1796892 RB10892 Rhodopirellula baltica SH 1 ammonium transporter NP_869672.1 5912176 D 243090 CDS NP_869673.1 32476679 1794301 5914894..5915067 1 NC_005027.1 hypothetical protein 5915067 1794301 RB10893 Rhodopirellula baltica SH 1 hypothetical protein NP_869673.1 5914894 D 243090 CDS NP_869674.1 32476680 1794204 complement(5915024..5916394) 1 NC_005027.1 PMID: 8706836 best DB hits: BLAST: pir:S71362; threonine synthase (EC 4.2.99.2) precursor - Arabidopsis; E=1e-126 pir:T08545; threonine synthase (EC 4.2.99.2) precursor - Arabidopsis; E=1e-126 gb:AAF74984.1; AF082894_1 (AF082894) threonine synthase [Solanum; E=1e-125 COG: MJ1465; COG0498 Threonine synthase; E=7e-58 PFAM: PF00291; Pyridoxal-phosphate dependent enzyme; E=2.1e-62; threonine synthase 5916394 thrC 1794204 thrC Rhodopirellula baltica SH 1 threonine synthase NP_869674.1 5915024 R 243090 CDS NP_869675.1 32476681 1796862 5916348..5917151 1 NC_005027.1 hypothetical protein 5917151 1796862 RB10895 Rhodopirellula baltica SH 1 hypothetical protein NP_869675.1 5916348 D 243090 CDS NP_869676.1 32476682 1795936 complement(5916555..5917040) 1 NC_005027.1 signal peptide 5917040 1795936 RB10896 Rhodopirellula baltica SH 1 signal peptide NP_869676.1 5916555 R 243090 CDS NP_869677.1 32476683 1792644 5917309..5918409 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: pir:A72417; sugar ABC transporter, periplasmic sugar-binding protein; E=2e-17 ddbj:BAB07559.1; (AP001520) sugar ABC transporter (sugar-binding; E=3e-15 ddbj:BAB07167.1; (AP001518) sugar ABC transporter (sugar-binding; E=4e-09 COG: TM0114; COG1879 Periplasmic sugar-binding proteins; E=2e-18; sugar ABC transporter, periplasmic sugar-binding protein 5918409 1792644 RB10898 Rhodopirellula baltica SH 1 sugar ABC transporter, periplasmic sugar-binding protein NP_869677.1 5917309 D 243090 CDS NP_869678.1 32476684 1793268 5918562..5918819 1 NC_005027.1 hypothetical protein 5918819 1793268 RB10902 Rhodopirellula baltica SH 1 hypothetical protein NP_869678.1 5918562 D 243090 CDS NP_869679.1 32476685 1796101 complement(5918945..5919703) 1 NC_005027.1 PMID: 9679194 best DB hits: BLAST: pir:H71040; probable phosphoesterase (EC 3.1.-.-) PH1616 -; E=1e-26 swissprot:Q58322; Y912_METJA HYPOTHETICAL PROTEIN MJ0912 -----; E=8e-25 pir:A75174; hypothetical protein PAB1999 - Pyrococcus abyssi (strain; E=2e-24 COG: PH1616; COG0639 Diadenosine tetraphosphatase and related; E=1e-27; phosphoesterase 5919703 1796101 RB10905 Rhodopirellula baltica SH 1 phosphoesterase NP_869679.1 5918945 R 243090 CDS NP_869680.1 32476686 1792389 complement(5919708..5920466) 1 NC_005027.1 best DB hits: BLAST: swissprot:Q58322; Y912_METJA HYPOTHETICAL PROTEIN MJ0912 -----; E=7e-31 pir:H71040; probable phosphoesterase (EC 3.1.-.-) PH1616 -; E=2e-26 pir:A75174; hypothetical protein PAB1999 - Pyrococcus abyssi (strain; E=4e-25 COG: MJ0912; COG0639 Diadenosine tetraphosphatase and related; E=7e-32 PFAM: PF01143; Uncharacterized phosphoesterase fami; E=0.086; phosphoesterase 5920466 1792389 RB10907 Rhodopirellula baltica SH 1 phosphoesterase NP_869680.1 5919708 R 243090 CDS NP_869681.1 32476687 1790970 5920575..5921378 1 NC_005027.1 hypothetical protein 5921378 1790970 RB10909 Rhodopirellula baltica SH 1 hypothetical protein NP_869681.1 5920575 D 243090 CDS NP_869682.1 32476688 1791070 complement(5921462..5923135) 1 NC_005027.1 best DB hits: BLAST: gb:AAA96788.1; (U51683) OMP1 precursor [Brucella abortus]; E=1e-14 pir:C70412; outer membrane protein - Aquifex aeolicus ----- gb:; E=5e-12 pir:H83190; probable outer membrane protein PA3648 [imported] -; E=1e-10 COG: aq_1300; COG0729 Predicted outer membrane protein; E=5e-13 PFAM: PF01103; Bacterial surface antigen; E=0.00093; hypothetical protein 5923135 1791070 RB10911 Rhodopirellula baltica SH 1 hypothetical protein NP_869682.1 5921462 R 243090 CDS NP_869683.1 32476689 1794794 complement(5923132..5924643) 1 NC_005027.1 PMID: 9403685 best DB hits: BLAST: pir:B70199; outer membrane protein homolog - Lyme disease spirochete; E=6e-17 pir:C70412; outer membrane protein - Aquifex aeolicus ----- gb:; E=3e-16 gb:AAA96788.1; (U51683) OMP1 precursor [Brucella abortus]; E=2e-15 COG: BB0795; COG0729 Predicted outer membrane protein; E=6e-18 PFAM: PF01103; Bacterial surface antigen; E=1.3e-16; hypothetical protein 5924643 1794794 RB10916 Rhodopirellula baltica SH 1 hypothetical protein NP_869683.1 5923132 R 243090 CDS NP_869684.1 32476690 1790073 5924636..5924824 1 NC_005027.1 hypothetical protein 5924824 1790073 RB10919 Rhodopirellula baltica SH 1 hypothetical protein NP_869684.1 5924636 D 243090 CDS NP_869685.1 32476691 1792556 complement(5924859..5925719) 1 NC_005027.1 hypothetical protein 5925719 1792556 RB10920 Rhodopirellula baltica SH 1 hypothetical protein NP_869685.1 5924859 R 243090 CDS NP_869686.1 32476692 1793611 complement(5925810..5926664) 1 NC_005027.1 PMID: 9163424 best DB hits: BLAST: swissprot:P55607; Y4OV_RHISN HYPOTHETICAL 30.2 KD PROTEIN Y4OV; E=8e-81 ddbj:BAB10918.1; (AB013389) gene_id:K1F13.7~similar to unknown; E=6e-75 gb:AAG60875.1; AF322012_180 (AF322013) ID407 [Bradyrhizobium; E=2e-29 PFAM: PF01884; PcrB family; E=0.34; transcriptional regulator Y4PA 5926664 1793611 RB10921 Rhodopirellula baltica SH 1 transcriptional regulator Y4PA NP_869686.1 5925810 R 243090 CDS NP_869687.1 32476693 1792369 complement(5926686..5927933) 1 NC_005027.1 best DB hits: BLAST: swissprot:P55606; Y4OU_RHISN HYPOTHETICAL PROTEIN Y4OU PRECURSOR; E=3e-85 ddbj:BAB10918.1; (AB013389) gene_id:K1F13.7~similar to unknown; E=1e-80; hypothetical protein 5927933 1792369 RB10922 Rhodopirellula baltica SH 1 hypothetical protein NP_869687.1 5926686 R 243090 CDS NP_869688.1 32476694 1795506 5927928..5928035 1 NC_005027.1 hypothetical protein 5928035 1795506 RB10923 Rhodopirellula baltica SH 1 hypothetical protein NP_869688.1 5927928 D 243090 CDS NP_869689.1 32476695 1792630 complement(5928118..5933337) 1 NC_005027.1 PMID: 8497190 best DB hits: BLAST: swissprot:Q02998; YH19_RHOCA HYPOTHETICAL 104.1 KD PROTEIN IN HYPE; E=2e-90 pir:H83132; probable sensorresponse regulator hybrid PA4112; E=7e-67 pir:S75136; sensory transduction histidine kinase slr2104 -; E=4e-64 COG: VC1349_2; COG0642 Sensory transduction histidine kinases; E=2e-49 PFAM: PF01339; CheB methylesterase; E=1.5e-09 PF01739; CheR methyltransferase; E=7e-68 PF00989; PAS domain; E=1.2e-05; sensor/response regulator hybrid 5933337 1792630 RB10924 Rhodopirellula baltica SH 1 sensor/response regulator hybrid NP_869689.1 5928118 R 243090 CDS NP_869690.1 32476696 1791152 complement(5933431..5933547) 1 NC_005027.1 hypothetical protein 5933547 1791152 RB10926 Rhodopirellula baltica SH 1 hypothetical protein NP_869690.1 5933431 R 243090 CDS NP_869691.1 32476697 1790081 5933490..5933741 1 NC_005027.1 hypothetical protein 5933741 1790081 RB10927 Rhodopirellula baltica SH 1 hypothetical protein NP_869691.1 5933490 D 243090 CDS NP_869692.1 32476698 1794406 complement(5933631..5933993) 1 NC_005027.1 hypothetical protein 5933993 1794406 RB10929 Rhodopirellula baltica SH 1 hypothetical protein NP_869692.1 5933631 R 243090 CDS NP_869693.1 32476699 1793472 5933742..5933906 1 NC_005027.1 hypothetical protein 5933906 1793472 RB10931 Rhodopirellula baltica SH 1 hypothetical protein NP_869693.1 5933742 D 243090 CDS NP_869694.1 32476700 1792812 5933872..5934069 1 NC_005027.1 signal peptide 5934069 1792812 RB10932 Rhodopirellula baltica SH 1 signal peptide NP_869694.1 5933872 D 243090 CDS NP_869695.1 32476701 1791355 5934135..5934341 1 NC_005027.1 best DB hits: BLAST: pir:F83054; conserved hypothetical protein PA4738 [imported] -; E=1e-05 swissprot:P32691; YJBJ_ECOLI PROTEIN YJBJ ----- pir: D65212; E=2e-05 embl:CAB98302.2; (AL390114) probable 8.3 Kd protein in dinf-qor; E=0.032 COG: PA4738; COG3237 Uncharacterized BCR; E=1e-06; hypothetical protein 5934341 1791355 RB10934 Rhodopirellula baltica SH 1 hypothetical protein NP_869695.1 5934135 D 243090 CDS NP_869696.1 32476702 1795905 5934348..5934518 1 NC_005027.1 hypothetical protein 5934518 1795905 RB10936 Rhodopirellula baltica SH 1 hypothetical protein NP_869696.1 5934348 D 243090 CDS NP_869697.1 32476703 1791003 complement(5934376..5934561) 1 NC_005027.1 hypothetical protein 5934561 1791003 RB10937 Rhodopirellula baltica SH 1 hypothetical protein NP_869697.1 5934376 R 243090 CDS NP_869698.1 32476704 1793426 5934628..5934816 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:H75351; conserved hypothetical protein - Deinococcus radiodurans; E=3e-06 gb:AAG20306.1; (AE005104) Vng2170h [Halobacterium sp. NRC-1]; E=0.81 COG: DR1804; COG1396 Predicted transcriptional regulators; E=3e-07; transcriptional regulator 5934816 1793426 RB10939 Rhodopirellula baltica SH 1 transcriptional regulator NP_869698.1 5934628 D 243090 CDS NP_869699.1 32476705 1792313 5934856..5935407 1 NC_005027.1 PMID: 11248100 best DB hits: BLAST: gb:AAK03637.1; (AE006192) unknown [Pasteurella multocida]; E=7e-25 gb:AAG50796.1; AC074309_13 (AC074309) unknown protein [Arabidopsis; E=0.009 pir:T36821; hypothetical protein SCI35.08c - Streptomyces coelicolor; E=0.15 PFAM: PF00583; Acetyltransferase (GNAT) family; E=6.2e-09; acetyltransferase 5935407 1792313 RB10940 Rhodopirellula baltica SH 1 acetyltransferase NP_869699.1 5934856 D 243090 CDS NP_869700.1 32476706 1794370 complement(5935417..5937012) 1 NC_005027.1 PMID: 9083067 best DB hits: BLAST: swissprot:P56558; OGT1_RAT UDP-N-ACETYLGLUCOSAMINE--PEPTIDE; E=9e-05 gb:AAF31458.1; (AF223393) HRNT1 [Homo sapiens]; E=9e-05 gb:AAA62535.1; (U21320) contains TPR domain-like repeats; E=0.003 PFAM: PF00515; TPR Domain; E=0.00017; TPR repeat-containing protein 5937012 ogt 1794370 ogt Rhodopirellula baltica SH 1 TPR repeat-containing protein NP_869700.1 5935417 R 243090 CDS NP_869701.1 32476707 1793202 complement(5937047..5937241) 1 NC_005027.1 hypothetical protein 5937241 1793202 RB10944 Rhodopirellula baltica SH 1 hypothetical protein NP_869701.1 5937047 R 243090 CDS NP_869702.1 32476708 1793743 5937215..5938453 1 NC_005027.1 hypothetical protein 5938453 1793743 RB10945 Rhodopirellula baltica SH 1 hypothetical protein NP_869702.1 5937215 D 243090 CDS NP_869703.1 32476709 1793614 5938575..5939036 1 NC_005027.1 best DB hits: BLAST: pir:T30321; hypothetical protein - Lactococcus lactis plasmid; E=0.015; hypothetical protein 5939036 1793614 RB10948 Rhodopirellula baltica SH 1 hypothetical protein NP_869703.1 5938575 D 243090 CDS NP_869704.1 32476710 1794960 5939124..5939825 1 NC_005027.1 signal peptide 5939825 1794960 RB10950 Rhodopirellula baltica SH 1 signal peptide NP_869704.1 5939124 D 243090 CDS NP_869705.1 32476711 1795285 complement(5939927..5940232) 1 NC_005027.1 hypothetical protein 5940232 1795285 RB10951 Rhodopirellula baltica SH 1 hypothetical protein NP_869705.1 5939927 R 243090 CDS NP_869706.1 32476712 1795405 complement(5940318..5940749) 1 NC_005027.1 hypothetical protein 5940749 1795405 RB10954 Rhodopirellula baltica SH 1 hypothetical protein NP_869706.1 5940318 R 243090 CDS NP_869707.1 32476713 1794090 5940336..5940689 1 NC_005027.1 hypothetical protein 5940689 1794090 RB10956 Rhodopirellula baltica SH 1 hypothetical protein NP_869707.1 5940336 D 243090 CDS NP_869708.1 32476714 1794832 5940708..5941007 1 NC_005027.1 best DB hits: BLAST: pir:F75258; hypothetical protein - Deinococcus radiodurans (strain; E=3e-16 pir:T35249; hypothetical protein SC5F2A.07 - Streptomyces coelicolor; E=4e-04; hypothetical protein 5941007 1794832 RB10957 Rhodopirellula baltica SH 1 hypothetical protein NP_869708.1 5940708 D 243090 CDS NP_869709.1 32476715 1795266 5941015..5941491 1 NC_005027.1 best DB hits: PFAM: PF01226; Formate/nitrite transporter; E=0.8; hypothetical protein 5941491 1795266 RB10958 Rhodopirellula baltica SH 1 hypothetical protein NP_869709.1 5941015 D 243090 CDS NP_869710.1 32476716 1794063 5941602..5942021 1 NC_005027.1 best DB hits: BLAST: pir:D75324; hypothetical protein - Deinococcus radiodurans (strain; E=7e-14 pir:C83546; hypothetical protein PA0806 [imported] - Pseudomonas; E=9e-11 embl:CAB92195.1; (AL356592) membrane protein.; E=0.13; transmembrane protein 5942021 1794063 RB10960 Rhodopirellula baltica SH 1 transmembrane protein NP_869710.1 5941602 D 243090 CDS NP_869711.1 32476717 1790198 5942116..5942730 1 NC_005027.1 best DB hits: BLAST: pir:C70127; gufA protein homolog - Lyme disease spirochete -----; E=2e-05 pir:T29905; hypothetical protein F59A3.4 - Caenorhabditis elegans; E=0.002 pir:E75052; gufA protein homolog PAB1443 - Pyrococcus abyssi (strain; E=0.027 COG: BB0219; COG0428 Predicted divalent heavy-metal cations transporter; E=2e-06; divalent heavy-metal cations transporter 5942730 gufA 1790198 gufA Rhodopirellula baltica SH 1 divalent heavy-metal cations transporter NP_869711.1 5942116 D 243090 CDS NP_869712.1 32476718 1791234 complement(5942752..5942934) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAA95845.1; (AP002070) Similar to Arabidopsis thaliana low; E=0.053 gb:AAF26091.1; AC012393_17 (AC012393) low temperature and salt; E=0.069 gb:AAF26090.1; AC012393_16 (AC012393) low temperature and salt; E=0.088 PFAM: PF01679; Uncharacterized protein family UPF00; E=1.8e-13; signal peptide 5942934 1791234 RB10966 Rhodopirellula baltica SH 1 signal peptide NP_869712.1 5942752 R 243090 CDS NP_869713.1 32476719 1791470 complement(5943015..5944040) 1 NC_005027.1 best DB hits: BLAST: embl:CAB62729.1; (AL133423) oxidoreductase [Streptomyces; E=1e-81 gb:AAG19273.1; (AE005023) quinone oxidoreductase; YfmJ; E=1e-77 pir:A69813; quinone oxidoreductase homolog yfmJ - Bacillus subtilis; E=6e-76 COG: VNG0815G; COG2130 NADP-dependent oxidoreductases; E=1e-78 PA5234; COG0604 NADPH:quinone reductase and related Zn-dependent; E=5e-10 Ta0841; COG1064 Zn-dependent alcohol dehydrogenases; E=2e-05 PFAM: PF00022; Actin; E=0.28 PF00107; Zinc-binding dehydrogenases; E=7.7e-37; oxidoreductase 5944040 1791470 RB10967 Rhodopirellula baltica SH 1 oxidoreductase NP_869713.1 5943015 R 243090 CDS NP_869714.1 32476720 1793698 complement(5944044..5945417) 1 NC_005027.1 PMID: 8297211 best DB hits: BLAST: swissprot:O32507; GABD_DEIRA SUCCINATE-SEMIALDEHYDE DEHYDROGENASE; E=1e-118 gb:AAD19405.1; (AF102543) succinic semialdehyde dehydrogenase; E=1e-111 swissprot:Q55585; GABD_SYNY3 PROBABLE SUCCINATE-SEMIALDEHYDE; E=1e-107 COG: DRA0343; COG1012 NAD-dependent aldehyde dehydrogenases; E=1e-119 PFAM: PF00171; Aldehyde dehydrogenase; E=2.7e-118; succinate-semialdehyde dehydrogenase [NADP+] 5945417 gabD 1793698 gabD Rhodopirellula baltica SH 1 succinate-semialdehyde dehydrogenase [NADP+] NP_869714.1 5944044 R 243090 CDS NP_869715.1 32476721 1793612 complement(5945495..5946406) 1 NC_005027.1 best DB hits: BLAST: pir:H83564; probable short-chain dehydrogenase PA0658 [imported] -; E=1e-42 pir:E70761; probable ketoacyl reductase - Mycobacterium tuberculosis; E=8e-38 gb:AAK03000.1; (AE006130) unknown [Pasteurella multocida]; E=4e-34 COG: PA0658; COG0300 Short-chain dehydrogenases of various substrate; E=1e-43 Rv1050; COG1028 Dehydrogenases with different specificities (related; E=5e-23 YMR226c; COG0300 Short-chain dehydrogenases of various substrate; E=2e-22 PFAM: PF00106; short chain dehydrogenase; E=1.6e-45; short-chain dehydrogenase 5946406 dltE 1793612 dltE Rhodopirellula baltica SH 1 short-chain dehydrogenase NP_869715.1 5945495 R 243090 CDS NP_869716.1 32476722 1793164 complement(5946410..5946523) 1 NC_005027.1 hypothetical protein 5946523 1793164 RB10973 Rhodopirellula baltica SH 1 hypothetical protein NP_869716.1 5946410 R 243090 CDS NP_869717.1 32476723 1792705 5946559..5947263 1 NC_005027.1 hypothetical protein 5947263 1792705 RB10974 Rhodopirellula baltica SH 1 hypothetical protein NP_869717.1 5946559 D 243090 CDS NP_869718.1 32476724 1790240 5947515..5947883 1 NC_005027.1 PMID: 8096175 best DB hits: BLAST: pir:S36340; sugE protein - Escherichia coli ----- embl:; E=6e-17 gb:AAG59349.1; AE005648_11 (AE005648) suppresses groEL, may be; E=4e-16 pir:S56376; sugES protein - Escherichia coli ----- gb:; E=6e-16 COG: sugE; COG2076 Membrane transporters of cations and cationic drugs; E=6e-17 NMB0393; COG2076 Membrane transporters of cations and cationic; E=6e-04 BH0840; COG2076 Membrane transporters of cations and cationic drugs; E=0.004 PFAM: PF00893; Integral membrane protein DUF7; E=3e-37; sugE protein- transmembrane protein 5947883 sugE 1790240 sugE Rhodopirellula baltica SH 1 sugE protein- transmembrane protein NP_869718.1 5947515 D 243090 CDS NP_869719.1 32476725 1794069 complement(5947956..5948414) 1 NC_005027.1 best DB hits: BLAST: pir:S62728; transposase - phage D3112 ----- embl: CAA60956.1; E=0.69; hypothetical protein 5948414 1794069 RB10979 Rhodopirellula baltica SH 1 hypothetical protein NP_869719.1 5947956 R 243090 CDS NP_869720.1 32476726 1790850 complement(5948527..5948844) 1 NC_005027.1 hypothetical protein 5948844 1790850 RB10980 Rhodopirellula baltica SH 1 hypothetical protein NP_869720.1 5948527 R 243090 CDS NP_869721.1 32476727 1794155 5948851..5950653 1 NC_005027.1 PMID: 8196548 best DB hits: BLAST: swissprot:P43505; MTRC_NEIGO MEMBRANE FUSION PROTEIN MTRC; E=3e-07 pir:S40252; MtrC protein - Neisseria gonorrhoeae ----- pir:; E=4e-07 pir:H81825; membrane fusion protein NMA1970 [imported] - Neisseria; E=1e-06 COG: NMB1716; COG0845 Membrane-fusion protein; E=1e-07 PA2430; COG1566 Multidrug resistance efflux pump; E=5e-05 PA4599; COG0845 Membrane-fusion protein; E=6e-04 PFAM: PF00529; HlyD family secretion protein; E=0.061; membrane fusion protein mtrC 5950653 mtrC 1794155 mtrC Rhodopirellula baltica SH 1 membrane fusion protein mtrC NP_869721.1 5948851 D 243090 CDS NP_869722.1 32476728 1790123 5950650..5953997 1 NC_005027.1 best DB hits: BLAST: pir:B83627; probable RND efflux transporter PA0158 [imported] -; E=9e-84 pir:F82829; acriflavin resistance protein XF0243 [imported] - Xylella; E=1e-81 pir:B82604; cation efflux system protein XF2083 [imported] - Xylella; E=6e-77 COG: PA0158; COG0841 Cation/multidrug efflux pump; E=8e-85 PFAM: PF00873; AcrB/AcrD/AcrF family; E=8.1e-17; RND efflux transporter 5953997 acrD 1790123 acrD Rhodopirellula baltica SH 1 RND efflux transporter NP_869722.1 5950650 D 243090 CDS NP_869723.1 32476729 1791595 complement(5954010..5954633) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB06554.1; (AP001516) BH2835~unknown conserved protein; E=5e-27 swissprot:P54168; YPGQ_BACSU HYPOTHETICAL 23.1 KD PROTEIN IN; E=7e-22 gb:AAK04163.1; AE006245_2 (AE006245) conserved hypothetical; E=6e-17 COG: BH2835; COG1418 Predicted HD superfamily hydrolase; E=5e-28 AF1423; COG1078 HD superfamily phosphohydrolases; E=0.002 PFAM: PF01966; HD domain; E=3.6e-12; hypothetical protein 5954633 1791595 RB10985 Rhodopirellula baltica SH 1 hypothetical protein NP_869723.1 5954010 R 243090 CDS NP_869724.1 32476730 1792920 5954713..5955597 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB04002.1; (AP001508) BH0283~unknown conserved protein; E=2e-62 pir:E83199; conserved hypothetical protein PA3578 [imported] -; E=3e-55 pir:A83301; hypothetical protein PA2770 [imported] - Pseudomonas; E=8e-52 COG: BH0283; COG0384 Predicted epimerase, PhzC/PhzF homolog; E=2e-63 PFAM: PF02567; Phenazine biosynthesis-like pro; E=1.5e-27 PF01678; Diaminopimelate epimerase; E=0.53; hypothetical protein 5955597 1792920 RB10987 Rhodopirellula baltica SH 1 hypothetical protein NP_869724.1 5954713 D 243090 CDS NP_869725.1 32476731 1790691 5955627..5956076 1 NC_005027.1 PMID: 9835490 best DB hits: BLAST: embl:CAA08848.1; (AJ009820) hypothetical protein [Salmonella; E=2e-16 gb:AAG17708.1; AF282595_4 (AF282595) unknown [Klebsiella; E=2e-16 pir:S74655; hypothetical protein sll1671 - Synechocystis sp. (strain; E=2e-15 COG: sll1671; COG0454 Histone acetyltransferase HPA2 and related; E=2e-16 PFAM: PF00583; Acetyltransferase (GNAT) family; E=3.9e-17; acetyltransferase 5956076 1790691 RB10989 Rhodopirellula baltica SH 1 acetyltransferase NP_869725.1 5955627 D 243090 CDS NP_869726.1 32476732 1793478 5956313..5956789 1 NC_005027.1 best DB hits: BLAST: pir:T36405; probable marR-family transcriptional regulator -; E=2e-04 gb:AAG00065.1; (U18133) CbaR [Comamonas testosteroni]; E=8e-04 pir:T29126; hypothetical protein SC1F2.17 - Streptomyces coelicolor; E=0.002 COG: XF0216; COG1846 Transcriptional regulators; E=4e-04 PFAM: PF01047; MarR family; E=2.9e-14; MarR family transcriptional regulator 5956789 1793478 RB10991 Rhodopirellula baltica SH 1 MarR family transcriptional regulator NP_869726.1 5956313 D 243090 CDS NP_869727.1 32476733 1793866 complement(5956746..5956949) 1 NC_005027.1 hypothetical protein 5956949 1793866 RB10992 Rhodopirellula baltica SH 1 hypothetical protein NP_869727.1 5956746 R 243090 CDS NP_869728.1 32476734 1795234 5956958..5957677 1 NC_005027.1 best DB hits: BLAST: gb:AAD42769.1; AF121849_1 (AF121849) SigG [Synechococcus sp. PCC; E=9e-12 pir:S77368; transcription initiation factor sigma E slr1545 -; E=1e-11 pir:C82583; RNA polymerase sigma-H factor XF2239 [imported] -; E=1e-08 COG: slr1545; COG1595 DNA-directed RNA polymerase specialized sigma; E=1e-12 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=0.00072 PF00140; Sigma-70 factor; E=0.028; RNA-polymerase sigma-E factor 5957677 sigG 1795234 sigG Rhodopirellula baltica SH 1 RNA-polymerase sigma-E factor NP_869728.1 5956958 D 243090 CDS NP_869729.1 32476735 1796924 5957741..5960086 1 NC_005027.1 best DB hits: BLAST: pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=8e-35 ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=4e-34 pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=9e-34 COG: BH2504_1; COG0515 Serine/threonine protein kinases; E=3e-35 PFAM: PF00069; Protein kinase domain; E=5.1e-31; serine/threonine protein kinase 5960086 1796924 RB10995 Rhodopirellula baltica SH 1 serine/threonine protein kinase NP_869729.1 5957741 D 243090 CDS NP_869730.1 32476736 1790324 5960143..5961429 1 NC_005027.1 best DB hits: BLAST: gb:AAD39269.1; AC007203_1 (AC007203) UDP-glucose:sterol; E=9e-62 embl:CAB06082.1; (Z83833) UDP-glucose:sterol glucosyltransferase; E=9e-59 gb:AAF27006.1; AC016827_17 (AC016827) UDP-glucose:sterol; E=9e-59 COG: YLR189c_2; COG1819 Glycosyl transferases, related to; E=4e-51; UDP-glucose:sterol glucosyltransferase 5961429 1790324 RB10996 Rhodopirellula baltica SH 1 UDP-glucose:sterol glucosyltransferase NP_869730.1 5960143 D 243090 CDS NP_869731.1 32476737 1792693 5961422..5961580 1 NC_005027.1 hypothetical protein 5961580 1792693 RB10998 Rhodopirellula baltica SH 1 hypothetical protein NP_869731.1 5961422 D 243090 CDS NP_869732.1 32476738 1794643 5961577..5963355 1 NC_005027.1 PMID: 11157277 best DB hits: BLAST: gb:AAG47946.1; AF222787_1 (AF222787) cycloinulo-oligosaccharide; E=2e-04 pir:T35944; probable beta-galactosidase - Streptomyces coelicolor; E=5e-04 pir:T18266; cycloinulo-oligosaccharide fructanotransferase (EC; E=0.030 PFAM: PF02012; BNR repeat; E=0.23; cycloinulo-oligosaccharide fructanotransferase 5963355 cft 1794643 cft Rhodopirellula baltica SH 1 cycloinulo-oligosaccharide fructanotransferase NP_869732.1 5961577 D 243090 CDS NP_869733.1 32476739 1793195 complement(5963380..5964054) 1 NC_005027.1 signal peptide 5964054 1793195 RB11000 Rhodopirellula baltica SH 1 signal peptide NP_869733.1 5963380 R 243090 CDS NP_869734.1 32476740 1795557 complement(5964047..5964931) 1 NC_005027.1 hypothetical protein 5964931 1795557 RB11001 Rhodopirellula baltica SH 1 hypothetical protein NP_869734.1 5964047 R 243090 CDS NP_869735.1 32476741 1789916 complement(5964938..5966887) 1 NC_005027.1 best DB hits: BLAST: embl:CAB76936.1; (AJ275974) cellulosomal protein; E=6e-11 swissprot:Q45535; COTH_BACSU INNER SPORE COAT PROTEIN H -----; E=0.77; hypothetical protein 5966887 celP 1789916 celP Rhodopirellula baltica SH 1 hypothetical protein NP_869735.1 5964938 R 243090 CDS NP_869736.1 32476742 1792755 5967078..5968262 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB10498.1; (AB013391) cycloartenol synthase [Arabidopsis; E=0.18; cycloartenol synthase 5968262 1792755 RB11008 Rhodopirellula baltica SH 1 cycloartenol synthase NP_869736.1 5967078 D 243090 CDS NP_869737.1 32476743 1794315 complement(5969036..5969752) 1 NC_005027.1 PMID: 8633080 best DB hits: BLAST: gb:AAC06216.1; (AF051690) iron-uptake factor [Pseudomonas; E=5e-17 pir:C83081; probable oxidoreductase PA4513 [imported] - Pseudomonas; E=5e-17 pir:B82329; sulfite reductase (NADPH) flavoprotein alpha-component; E=3e-10 COG: PA4513_2; COG0369 Sulfite reductase flavoprotein subunit; E=7e-17 VC0002; COG0716 Flavodoxins; E=2e-05 PFAM: PF00258; Flavodoxin; E=4.7e-29; iron-uptake factor- FMN-dependent oxidoreductase 5969752 piuB 1794315 piuB Rhodopirellula baltica SH 1 iron-uptake factor- FMN-dependent oxidoreductase NP_869737.1 5969036 R 243090 CDS NP_869738.1 32476744 1790300 complement(5969749..5970585) 1 NC_005027.1 PMID: 20365717 best DB hits: BLAST: pir:E82786; hypothetical protein XF0595 [imported] - Xylella; E=2e-63 pir:A81079; conserved hypothetical protein NMB1475 [imported] -; E=0.33 pir:A81864; probable NMA1686 [imported] - Neisseria meningitidis; E=0.79; hypothetical protein 5970585 1790300 RB11010 Rhodopirellula baltica SH 1 hypothetical protein NP_869738.1 5969749 R 243090 CDS NP_869739.1 32476745 1792652 complement(5970582..5971127) 1 NC_005027.1 PMID: 20365717 best DB hits: BLAST: pir:F82786; conserved hypothetical protein XF0596 [imported] -; E=4e-45 pir:G75353; hypothetical protein - Deinococcus radiodurans (strain; E=3e-08; hypothetical protein 5971127 1792652 RB11011 Rhodopirellula baltica SH 1 hypothetical protein NP_869739.1 5970582 R 243090 CDS NP_869740.1 32476746 1793105 complement(5971146..5971802) 1 NC_005027.1 PMID: 20365717 best DB hits: BLAST: pir:G82786; conserved hypothetical protein XF0597 [imported] -; E=2e-46 gb:AAG02156.1; AF212041_12 (AF212041) plasmolipin [Zymomonas; E=1e-20 pir:F75353; hypothetical protein - Deinococcus radiodurans (strain; E=1e-09 COG: XF0597; COG3295 Uncharacterized BCR; E=2e-47; hypothetical protein 5971802 1793105 RB11013 Rhodopirellula baltica SH 1 hypothetical protein NP_869740.1 5971146 R 243090 CDS NP_869741.1 32476747 1791417 complement(5971828..5972916) 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 5972916 1791417 RB11015 Rhodopirellula baltica SH 1 signal peptide NP_869741.1 5971828 R 243090 CDS NP_869742.1 32476748 1795280 complement(5973102..5974211) 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 5974211 1795280 RB11016 Rhodopirellula baltica SH 1 signal peptide NP_869742.1 5973102 R 243090 CDS NP_869743.1 32476749 1795462 complement(5974141..5974374) 1 NC_005027.1 hypothetical protein 5974374 1795462 RB11019 Rhodopirellula baltica SH 1 hypothetical protein NP_869743.1 5974141 R 243090 CDS NP_869744.1 32476750 1793706 complement(5974498..5975385) 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAC10293.1; (AL442629) ABC transport system ATP; E=3e-49 embl:CAB81857.1; (AL161691) ABC-transporter ATP-binding; E=6e-48 embl:CAB89461.1; (AL354048) ABC transporter ATP-binding; E=5e-47 COG: AF1469; COG1136 ABC-type (unclassified) transport system, ATPase; E=3e-47 PFAM: PF00485; Phosphoribulokinase / Uridine; E=0.21 PF00005; ABC transporter; E=2.1e-56; ABC transport system ATP binding protein 5975385 1793706 RB11021 Rhodopirellula baltica SH 1 ABC transport system ATP binding protein NP_869744.1 5974498 R 243090 CDS NP_869745.1 32476751 1790727 complement(5975424..5975603) 1 NC_005027.1 hypothetical protein 5975603 1790727 RB11023 Rhodopirellula baltica SH 1 hypothetical protein NP_869745.1 5975424 R 243090 CDS NP_869746.1 32476752 1793369 5975602..5977248 1 NC_005027.1 PMID: 11694506 best DB hits: BLAST: pir:B83340; hypothetical protein PA2451 [imported] - Pseudomonas; E=2e-32 swissprot:O51900; FES_ERWCH ENTEROCHELIN ESTERASE (FERRIC; E=6e-20 gb:AAC46181.1; (U97227) ferric enterochelin esterase homolog; E=2e-18 COG: PA2451; COG2382 Enterochelin esterase and related enzymes; E=2e-33; enterochelin esterase 5977248 fes 1793369 fes Rhodopirellula baltica SH 1 enterochelin esterase NP_869746.1 5975602 D 243090 CDS NP_869747.1 32476753 1794408 complement(5977270..5980077) 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAC09551.1; (AL442120) ABC transport system; E=1e-06 pir:G70821; hypothetical protein Rv0987 - Mycobacterium tuberculosis; E=0.005 ddbj:BAB06840.1; (AP001517) BH3121~unknown conserved protein; E=0.011 COG: Rv0987_1; COG0577 Predicted permease; E=8e-04 PFAM: PF02687; Predicted permease; E=3.3e-13; ABC transporter 5980077 1794408 RB11027 Rhodopirellula baltica SH 1 ABC transporter NP_869747.1 5977270 R 243090 CDS NP_869748.1 32476754 1791748 complement(5980074..5980829) 1 NC_005027.1 PMID: 9389475 best DB hits: BLAST: gb:AAB89781.1; (AE001001) ABC transporter ATP-binding protein; E=2e-46 embl:CAB89461.1; (AL354048) ABC transporter ATP-binding; E=2e-45 embl:CAC10293.1; (AL442629) ABC transport system ATP; E=3e-45 COG: AF1469; COG1136 ABC-type (unclassified) transport system, ATPase; E=2e-47 PFAM: PF01580; FtsK/SpoIIIE family; E=0.7 PF00485; Phosphoribulokinase / Uridine ki; E=0.21 PF00005; ABC transporter; E=7.9e-61; ABC transporter ATP-binding protein 5980829 1791748 RB11030 Rhodopirellula baltica SH 1 ABC transporter ATP-binding protein NP_869748.1 5980074 R 243090 CDS NP_869749.1 32476755 1792373 5980865..5981053 1 NC_005027.1 hypothetical protein 5981053 1792373 RB11031 Rhodopirellula baltica SH 1 hypothetical protein NP_869749.1 5980865 D 243090 CDS NP_869750.1 32476756 1793862 5981108..5984020 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB89462.1; (AL354048) ABC transporter integral; E=2e-16 embl:CAC09551.1; (AL442120) ABC transport system; E=2e-11 embl:CAB62838.1; (AL133443) hypothetical protein L5529.07; E=3e-04 COG: AF1017; COG0577 Predicted permease; E=3e-05 PFAM: PF02687; Predicted permease; E=2.3e-12; ABC transporter integral membrane protein 5984020 1793862 RB11033 Rhodopirellula baltica SH 1 ABC transporter integral membrane protein NP_869750.1 5981108 D 243090 CDS NP_869751.1 32476757 1795547 complement(5984197..5985609) 1 NC_005027.1 PMID: 7602583 PMID: 7827089 PMID: 10512705 PMID: 10622255 best DB hits: BLAST: pir:E83006; two-component response regulator NtrC PA5125 [imported]; E=9e-89 swissprot:P41789; NTRC_SALTY NITROGEN REGULATION PROTEIN NR(I); E=1e-85 gb:AAG59057.1; AE005617_6 (AE005617) response regulator for gln; E=2e-85 COG: PA5125; COG2204 AAA superfamily ATPases with N-terminal receiver; E=8e-90 PFAM: PF00072; Response regulator receiver doma; E=1e-31 PF00158; Sigma-54 interaction domain; E=2.1e-114; nitrogen regulation protein NR(I) 5985609 ntrC 1795547 ntrC Rhodopirellula baltica SH 1 nitrogen regulation protein NR(I) NP_869751.1 5984197 R 243090 CDS NP_869752.1 32476758 1792731 complement(5985617..5987098) 1 NC_005027.1 PMID: 7553451 best DB hits: BLAST: pir:A82630; two-component system, sensor protein XF1849 [imported] -; E=1e-11 pir:S35265; ntrB protein - Azospirillum brasilense ----- embl:; E=1e-11 swissprot:P45670; NTRB_AZOBR NITROGEN REGULATION PROTEIN NTRB; E=3e-11 COG: XF1849; COG0642 Sensory transduction histidine kinases; E=1e-12 PFAM: PF00672; HAMP domain; E=9.9e-11 PF00512; His Kinase A (phosphoacceptor) doma; E=0.00015 PF02518; Histidine kinase-, DNA gyrase B-, p; E=4.8e-20; nitrogen regulation protein ntrB 5987098 ntrB 1792731 ntrB Rhodopirellula baltica SH 1 nitrogen regulation protein ntrB NP_869752.1 5985617 R 243090 CDS NP_869753.1 32476759 1794787 5987234..5988283 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 5988283 1794787 RB11041 Rhodopirellula baltica SH 1 signal peptide NP_869753.1 5987234 D 243090 CDS NP_869754.1 32476760 1791535 5988389..5989402 1 NC_005027.1 PMID: 9734815 best DB hits: BLAST: ddbj:BAB09005.1; (AB012239) gene_id:K11J9.14~unknown protein; E=0.63 PFAM: PF00036; EF hand; E=0.00096; hypothetical protein 5989402 1791535 RB11043 Rhodopirellula baltica SH 1 hypothetical protein NP_869754.1 5988389 D 243090 CDS NP_869755.1 32476761 1790954 complement(5989573..5990562) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:G83341; hypothetical protein PA2428 [imported] - Pseudomonas; E=1e-102 gb:AAB09718.1; (U12891) ORF1 [Pseudomonas aeruginosa]; E=1e-101 pir:B82287; conserved hypothetical protein VC0728 [imported] -; E=2e-81 COG: PA2428; COG2326 Uncharacterized BCR; E=1e-103; hypothetical protein 5990562 1790954 RB11047 Rhodopirellula baltica SH 1 hypothetical protein NP_869755.1 5989573 R 243090 CDS NP_869756.1 32476762 1795679 complement(5990489..5990713) 1 NC_005027.1 hypothetical protein 5990713 1795679 RB11049 Rhodopirellula baltica SH 1 hypothetical protein NP_869756.1 5990489 R 243090 CDS NP_869757.1 32476763 1794324 complement(5990726..5991910) 1 NC_005027.1 PMID: 7478940 best DB hits: BLAST: pir:D82295; nptA protein VC0676 [imported] - Vibrio cholerae (group; E=9e-73 gb:AAC42026.1; (L33878) renal cortical Na+Pi co-transporter [Mus; E=1e-18 gb:AAC52361.1; (U22465) NaPi-cotransporter [Mus musculus]; E=1e-18 COG: VC0676; COG1283 Na+/phosphate symporter; E=9e-74 PFAM: PF02659; Domain of unknown function DUF; E=0.051 PF02690; Na+/Pi-cotransporter; E=2.8e-96; nptA protein 5991910 nptA 1794324 nptA Rhodopirellula baltica SH 1 nptA protein NP_869757.1 5990726 R 243090 CDS NP_869758.1 32476764 1794548 complement(5991855..5992130) 1 NC_005027.1 PMID: 9634230 best DB hits: BLAST: pir:E70933; hypothetical protein Rv0574c - Mycobacterium; E=0.88; hypothetical protein 5992130 1794548 RB11052 Rhodopirellula baltica SH 1 hypothetical protein NP_869758.1 5991855 R 243090 CDS NP_869759.1 32476765 1791068 complement(5992248..5994449) 1 NC_005027.1 PMID: 10470850 best DB hits: BLAST: ddbj:BAB09588.1; (AB018118) gene_id:MRI1.6~pir D64592~similar to; E=7e-09 pir:G83627; probable nucleoside hydrolase PA0143 [imported] -; E=0.010 COG: PA0143; COG1957 Inosine-uridine nucleoside N-ribohydrolase; E=0.001 PFAM: PF01156; Inosine-uridine preferring nucle; E=0.022 PF02012; BNR repeat; E=0.32; hypothetical protein 5994449 1791068 RB11055 Rhodopirellula baltica SH 1 hypothetical protein NP_869759.1 5992248 R 243090 CDS NP_869760.1 32476766 1791307 5994448..5994648 1 NC_005027.1 hypothetical protein 5994648 1791307 RB11060 Rhodopirellula baltica SH 1 hypothetical protein NP_869760.1 5994448 D 243090 CDS NP_869761.1 32476767 1791239 complement(5994714..5995358) 1 NC_005027.1 hypothetical protein 5995358 1791239 RB11062 Rhodopirellula baltica SH 1 hypothetical protein NP_869761.1 5994714 R 243090 CDS NP_869762.1 32476768 1793837 complement(5995455..5997761) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:B70979; hypothetical protein Rv3273 - Mycobacterium tuberculosis; E=2e-36 pir:D83631; probable sulfate transporter PA0103 [imported] -; E=3e-31 ddbj:BAB20551.1; (AB040415) Mig5 [Salmonella enterica serovar; E=9e-24 COG: PA0103; COG0659 Sulfate permease and related transporters (MFS; E=2e-32 DR2238; COG0288 Carbonic anhydrase; E=2e-24 slr0096; COG0659 Sulfate permease and related transporters (MFS; E=4e-15 PFAM: PF00916; Sulfate transporter family; E=1.5e-39 PF00484; Carbonic anhydrase; E=5.9e-12 PF02878; Phosphoglucomutase/phosphomann; E=0.17; sulfate transporter 5997761 sul1 1793837 sul1 Rhodopirellula baltica SH 1 sulfate transporter NP_869762.1 5995455 R 243090 CDS NP_869763.1 32476769 1795220 5997794..5998018 1 NC_005027.1 hypothetical protein 5998018 1795220 RB11065 Rhodopirellula baltica SH 1 hypothetical protein NP_869763.1 5997794 D 243090 CDS NP_869764.1 32476770 1796830 complement(5998015..5998308) 1 NC_005027.1 signal peptide 5998308 1796830 RB11067 Rhodopirellula baltica SH 1 signal peptide NP_869764.1 5998015 R 243090 CDS NP_869765.1 32476771 1790931 complement(5998517..6000286) 1 NC_005027.1 the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter 6000286 nhaP 1790931 nhaP Rhodopirellula baltica SH 1 potassium/proton antiporter NP_869765.1 5998517 R 243090 CDS NP_869766.1 32476772 1792267 6000321..6000479 1 NC_005027.1 hypothetical protein 6000479 1792267 RB11070 Rhodopirellula baltica SH 1 hypothetical protein NP_869766.1 6000321 D 243090 CDS NP_869767.1 32476773 1795564 complement(6000550..6003768) 1 NC_005027.1 PMID: 8905231 PMID: 8407802 PMID: 7651136 best DB hits: BLAST: pir:F83335; RND multidrug efflux transporter MexF PA2494 [imported] -; E=0.0 pir:T30830; hypothetical protein mexF - Pseudomonas aeruginosa -----; E=0.0 pir:D83206; probable RND efflux transporter PA3522 [imported] -; E=0.0 COG: PA2494; COG0841 Cation/multidrug efflux pump; E=0.0 PFAM: PF00873; AcrB/AcrD/AcrF family; E=0; acriflavine resistance protein B 6003768 acrB 1795564 acrB Rhodopirellula baltica SH 1 acriflavine resistance protein B NP_869767.1 6000550 R 243090 CDS NP_869768.1 32476774 1793909 complement(6003705..6005108) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:E83335; RND multidrug efflux membrane fusion protein MexE; E=1e-54 pir:T30829; hypothetical protein mexE - Pseudomonas aeruginosa; E=1e-52 pir:E83206; probable RND efflux membrane fusion protein precursor; E=2e-42 COG: PA2493; COG0845 Membrane-fusion protein; E=1e-55 PFAM: PF00364; Biotin-requiring enzyme; E=0.0006 PF00529; HlyD family secretion protein; E=4e-20; acriflavin resistance protein A 6005108 acrA 1793909 acrA Rhodopirellula baltica SH 1 acriflavin resistance protein A NP_869768.1 6003705 R 243090 CDS NP_869769.1 32476775 1793209 complement(6005224..6005727) 1 NC_005027.1 PMID: 11473263 PMID: 9068629 best DB hits: BLAST: pir:A82692; transcriptional regulator MarR family XF1354 [imported] -; E=1e-04 embl:CAB95985.1; (AL360034) MarR-family regulatory; E=2e-04 gb:AAB87745.1; (U89914) hypothetical 16.1 kDa transcriptional; E=2e-04 COG: XF1354; COG1846 Transcriptional regulators; E=1e-05 PFAM: PF01047; MarR family; E=9.8e-17; MarR family transcriptional regulator 6005727 marR 1793209 marR Rhodopirellula baltica SH 1 MarR family transcriptional regulator NP_869769.1 6005224 R 243090 CDS NP_869770.1 32476776 1794998 complement(6005904..6006371) 1 NC_005027.1 PMID: 10761919 best DB hits: BLAST: pir:D81775; conserved hypothetical protein NMA2048 [imported] -; E=3e-17 pir:F81198; conserved hypothetical protein NMB0437 [imported] -; E=4e-17 gb:AAC61685.1; (AF052517) CDG1D [Acetobacter xylinus]; E=1e-15 COG: NMB0437; COG1959 Predicted transcriptional regulator; E=4e-18 PFAM: PF02082; Uncharacterized protein family UPF00; E=1.3e-33; hypothetical protein 6006371 1794998 RB11077 Rhodopirellula baltica SH 1 hypothetical protein NP_869770.1 6005904 R 243090 CDS NP_869771.1 32476777 1792146 6006388..6006543 1 NC_005027.1 hypothetical protein 6006543 1792146 RB11079 Rhodopirellula baltica SH 1 hypothetical protein NP_869771.1 6006388 D 243090 CDS NP_869772.1 32476778 1791507 6006413..6006592 1 NC_005027.1 hypothetical protein 6006592 1791507 RB11080 Rhodopirellula baltica SH 1 hypothetical protein NP_869772.1 6006413 D 243090 CDS NP_869773.1 32476779 1796878 6006629..6007093 1 NC_005027.1 hypothetical protein 6007093 1796878 RB11081 Rhodopirellula baltica SH 1 hypothetical protein NP_869773.1 6006629 D 243090 CDS NP_869774.1 32476780 1793476 complement(6007033..6007371) 1 NC_005027.1 hypothetical protein 6007371 1793476 RB11082 Rhodopirellula baltica SH 1 hypothetical protein NP_869774.1 6007033 R 243090 CDS NP_869775.1 32476781 1794856 6007384..6010278 1 NC_005027.1 PMID: 9384377 best DB hits: BLAST: pir:F69688; response regulator aspartate phosphatase rapC - Bacillus; E=0.79; response regulator aspartate phosphatase rapC 6010278 1794856 RB11084 Rhodopirellula baltica SH 1 response regulator aspartate phosphatase rapC NP_869775.1 6007384 D 243090 CDS NP_869776.1 32476782 1796893 6010268..6012115 1 NC_005027.1 best DB hits: BLAST: ddbj:BAA91540.1; (AK001182) unnamed protein product [Homo; E=0.027 embl:CAB98267.1; (AJ276171) ASPIC [Homo sapiens]; E=0.027 embl:CAB98268.1; (AJ276171) ASPIC [Homo sapiens] ----- embl:; E=0.027; hypothetical protein 6012115 1796893 RB11088 Rhodopirellula baltica SH 1 hypothetical protein NP_869776.1 6010268 D 243090 CDS NP_869777.1 32476783 1794583 complement(6012230..6013378) 1 NC_005027.1 PMID: 10952301 best DB hits: BLAST: pir:T17197; adenylate cyclase homolog - Spirulina platensis -----; E=5e-17 pir:G82244; response regulator VC1087 [imported] - Vibrio cholerae; E=1e-15 ddbj:BAA14000.1; (D89625) adenylate cyclase [Anabaena sp.]; E=6e-14 COG: VC1087_1; COG0784 CheY-like receiver domains; E=2e-16 PA2881; COG2204 AAA superfamily ATPases with N-terminal receiver; E=2e-12 VC1086_1; COG0784 CheY-like receiver domains; E=4e-11 PFAM: PF00072; Response regulator receiver doma; E=8e-19; adenylate cyclase 6013378 cyaA 1794583 cyaA Rhodopirellula baltica SH 1 adenylate cyclase NP_869777.1 6012230 R 243090 CDS NP_869778.1 32476784 1793741 complement(6013416..6015725) 1 NC_005027.1 PMID: 9045826 PMID: 10564511 best DB hits: BLAST: pir:F83324; probable two-component sensor PA2571 [imported] -; E=5e-36 pir:D82244; sensory box sensor histidine kinase VC1084 [imported] -; E=1e-35 pir:C82425; sensor histide kinase VCA0719 [imported] - Vibrio; E=2e-34 COG: PA2571; COG0642 Sensory transduction histidine kinases; E=5e-37 PFAM: PF00989; PAS domain; E=1.1e-06 PF00512; His Kinase A (phosphoacceptor) doma; E=0.001 PF02518; Histidine kinase-, DNA gyrase B-, p; E=2.9e-30; two-component sensor 6015725 1793741 RB11091 Rhodopirellula baltica SH 1 two-component sensor NP_869778.1 6013416 R 243090 CDS NP_869779.1 32476785 1789929 complement(6015744..6016727) 1 NC_005027.1 hypothetical protein 6016727 1789929 RB11095 Rhodopirellula baltica SH 1 hypothetical protein NP_869779.1 6015744 R 243090 CDS NP_869780.1 32476786 1791179 6016757..6017959 1 NC_005027.1 PMID: 20365717 best DB hits: BLAST: pir:A82699; conserved hypothetical protein XF1304 [imported] -; E=4e-20 pir:T39090; probable integral membrane protein - fission yeast; E=1e-09 embl:CAB62252.1; (Y18559) hypothetical protein [Pichia farinosa]; E=2e-08 COG: XF1304; COG3163 Uncharacterized ACR; E=4e-21 BH0081; COG2966 Uncharacterized BCR; E=1e-06 MTH749; COG3163 Uncharacterized ACR; E=2e-04; hypothetical protein 6017959 1791179 RB11099 Rhodopirellula baltica SH 1 hypothetical protein NP_869780.1 6016757 D 243090 CDS NP_869781.1 32476787 1791481 complement(6017989..6018402) 1 NC_005027.1 Transcriptional regulator that represses the manganese transporter MntH when manganese is present; manganese transport regulator MntR 6018402 1791481 RB11100 Rhodopirellula baltica SH 1 manganese transport regulator MntR NP_869781.1 6017989 R 243090 CDS NP_869782.1 32476788 1792698 6018615..6019805 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; signal peptide 6019805 1792698 RB11101 Rhodopirellula baltica SH 1 signal peptide NP_869782.1 6018615 D 243090 CDS NP_869783.1 32476789 1795701 6019790..6020155 1 NC_005027.1 hypothetical protein 6020155 1795701 RB11104 Rhodopirellula baltica SH 1 hypothetical protein NP_869783.1 6019790 D 243090 CDS NP_869784.1 32476790 1791955 complement(6020182..6021042) 1 NC_005027.1 best DB hits: BLAST: pir:T37061; probable secreted protein - Streptomyces coelicolor; E=8e-19 pir:T35483; hypothetical protein SC6C5.12c SC6C5.12c - Streptomyces; E=2e-15 ddbj:BAB15080.1; (AK025164) unnamed protein product [Homo; E=7e-12 COG: VC2238; COG3021 Uncharacterized BCR; E=0.001 PFAM: PF01260; AP endonuclease 1; E=0.8; hypothetical protein 6021042 1791955 RB11105 Rhodopirellula baltica SH 1 hypothetical protein NP_869784.1 6020182 R 243090 CDS NP_869785.1 32476791 1794608 6021425..6022102 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S77018; hypothetical protein sll0788 - Synechocystis sp. (strain; E=0.12; hypothetical protein 6022102 1794608 RB11107 Rhodopirellula baltica SH 1 hypothetical protein NP_869785.1 6021425 D 243090 CDS NP_869786.1 32476792 1795911 complement(6022268..6022597) 1 NC_005027.1 hypothetical protein 6022597 1795911 RB11109 Rhodopirellula baltica SH 1 hypothetical protein NP_869786.1 6022268 R 243090 CDS NP_869787.1 32476793 1792585 6022600..6023529 1 NC_005027.1 PMID: 11759840 best DB hits: BLAST: embl:CAB93418.1; (AL357524) transposase [Streptomyces; E=0.60; transposase 6023529 1792585 RB11110 Rhodopirellula baltica SH 1 transposase NP_869787.1 6022600 D 243090 CDS NP_869788.1 32476794 1793964 complement(6023806..6024144) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:A83243; CsaA protein PA3221 [imported] - Pseudomonas aeruginosa; E=9e-25 ddbj:BAB05504.1; (AP001513) chaperonin involved in protein; E=2e-23 swissprot:P37584; CSAA_BACSU CSAA PROTEIN ----- pir: E69607; E=7e-23 COG: PA3221; COG0073 EMAP domain; E=9e-26 PFAM: PF01588; tRNA binding domain; E=4.9e-17; CsaA protein 6024144 csaA 1793964 csaA Rhodopirellula baltica SH 1 CsaA protein NP_869788.1 6023806 R 243090 CDS NP_869789.1 32476795 1791078 6024283..6024474 1 NC_005027.1 hypothetical protein 6024474 1791078 RB11114 Rhodopirellula baltica SH 1 hypothetical protein NP_869789.1 6024283 D 243090 CDS NP_869790.1 32476796 1790119 complement(6024483..6024632) 1 NC_005027.1 hypothetical protein 6024632 1790119 RB11115 Rhodopirellula baltica SH 1 hypothetical protein NP_869790.1 6024483 R 243090 CDS NP_869791.1 32476797 1793186 6024657..6026306 1 NC_005027.1 PMID: 7744061 best DB hits: BLAST: pir:S69336; arylsulfatase (EC 3.1.6.1) - Pseudomonas aeruginosa; E=8e-74 swissprot:P51691; ARS_PSEAE ARYLSULFATASE (ARYL-SULFATE; E=5e-73 gb:AAF71377.1; AF262990_2 (AF262990) arylsulfatase [Klebsiella; E=3e-65 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=5e-74 PFAM: PF00884; Sulfatase; E=2.3e-45 PF00505; HMG (high mobility group) box; E=0.84 PF00884; Sulfatase; E=5.5e-54; arylsulfatase 6026306 aslA 1793186 aslA Rhodopirellula baltica SH 1 arylsulfatase NP_869791.1 6024657 D 243090 CDS NP_869792.1 32476798 1792319 complement(6026407..6027564) 1 NC_005027.1 PMID: 11016950 best DB hits: BLAST: gb:AAG20045.1; (AE005084) chloromuconate cycloisomerase; YkfB1; E=8e-48 gb:AAF28135.1; AF153317_32 (AF153317) YcjG [Shigella dysenteriae]; E=6e-28 swissprot:P51981; YCJG_ECOLI HYPOTHETICAL 34.7 KD PROTEIN IN; E=1e-27 COG: VNG1837G; COG1441 O-succinylbenzoate synthase and related enzymes; E=8e-49 PFAM: PF02746; Mandelate racemase / muconate; E=1.3e-09 PF01188; Mandelate racemase / muconate; E=4.9e-21; chloromuconate cycloisomerase YkfB1 6027564 1792319 RB11118 Rhodopirellula baltica SH 1 chloromuconate cycloisomerase YkfB1 NP_869792.1 6026407 R 243090 CDS NP_869793.1 32476799 1793215 complement(6027561..6028775) 1 NC_005027.1 PMID: 1587462 PMID: 1551459 best DB hits: BLAST: swissprot:P39043; DPP6_BACSH DIPEPTIDYL-PEPTIDASE VI (DPP VI); E=2e-19 pir:A69856; polysugar degrading enzyme homolog ykfC - Bacillus; E=6e-14 ddbj:BAB06726.1; (AP001517) polysugar degrading enzyme; E=7e-14 COG: BS_ykfC; COG0791 Cell wall-associated hydrolases; E=6e-15 BH3007; COG0791 Cell wall-associated hydrolases (invasion-associated; E=6e-15 DR1325_2; COG0791 Cell wall-associated hydrolases; E=2e-12 PFAM: PF00877; NLP/P60 family; E=4.2e-24; pipeptidyl-peptidase VI 6028775 1793215 RB11119 Rhodopirellula baltica SH 1 pipeptidyl-peptidase VI NP_869793.1 6027561 R 243090 CDS NP_869794.1 32476800 1791770 6028836..6029543 1 NC_005027.1 hypothetical protein 6029543 1791770 RB11121 Rhodopirellula baltica SH 1 hypothetical protein NP_869794.1 6028836 D 243090 CDS NP_869795.1 32476801 1794404 complement(6029516..6029755) 1 NC_005027.1 hypothetical protein 6029755 1794404 RB11122 Rhodopirellula baltica SH 1 hypothetical protein NP_869795.1 6029516 R 243090 CDS NP_869796.1 32476802 1793136 complement(6029771..6031246) 1 NC_005027.1 PMID: 8020961 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=3e-31 pir:S07089; arylsulfatase (EC 3.1.6.1) - sea urchin (Lytechinus; E=9e-29 swissprot:P14000; ARS_HEMPU ARYLSULFATASE PRECURSOR (ARYL-SULFATE; E=9e-29 COG: PA0183; COG3119 Arylsulfatase A and related enzymes; E=2e-27 PFAM: PF00884; Sulfatase; E=1.6e-44; N-acetylgalactosamine 6-sulfate sulfatase (GALNS) 6031246 aslA 1793136 aslA Rhodopirellula baltica SH 1 N-acetylgalactosamine 6-sulfate sulfatase (GALNS) NP_869796.1 6029771 R 243090 CDS NP_869797.1 32476803 1790348 complement(6031401..6033116) 1 NC_005027.1 PMID: 8325651 best DB hits: BLAST: gb:AAA37880.1; (L07921) iduronate sulfatase [Mus musculus]; E=1e-55 gb:AAA16877.1; (L13329) iduronate-2-sulfatase [Homo sapiens]; E=5e-53 gb:AAB33747.1; iduronate-2-sulfatase, IDS {EC 3.1.6.13} [human,; E=2e-52 COG: PA0031; COG3119 Arylsulfatase A and related enzymes; E=8e-36 BS_yfnI; COG1368 Phosphoglycerol transferase and related proteins,; E=4e-05 VC2600; COG3083 Predicted hydrolase of alkaline phosphatase; E=5e-05 PFAM: PF00884; Sulfatase; E=8.7e-22; iduronate-2-sulfatase 6033116 ids 1790348 ids Rhodopirellula baltica SH 1 iduronate-2-sulfatase NP_869797.1 6031401 R 243090 CDS NP_869798.1 32476804 1791167 6033077..6033415 1 NC_005027.1 hypothetical protein 6033415 1791167 RB11130 Rhodopirellula baltica SH 1 hypothetical protein NP_869798.1 6033077 D 243090 CDS NP_869799.1 32476805 1790654 6033307..6035646 1 NC_005027.1 PMID: 7488183 best DB hits: BLAST: pir:JC4397; peroxinectin precursor - signal crayfish ----- embl:; E=2e-65 gb:AAC94959.1; (U68724) polysomal ribonuclease 1 [Xenopus laevis]; E=5e-65 embl:CAA43114.1; (X60703) peroxidase [Mus musculus]; E=8e-65 PFAM: PF00404; Dockerin type I repeat; E=0.11 PF00141; Peroxidase; E=7.8e-06; peroxinectin precursor 6035646 1790654 RB11131 Rhodopirellula baltica SH 1 peroxinectin precursor NP_869799.1 6033307 D 243090 CDS NP_869800.1 32476806 1791103 complement(6035845..6036210) 1 NC_005027.1 hypothetical protein 6036210 1791103 RB11132 Rhodopirellula baltica SH 1 hypothetical protein NP_869800.1 6035845 R 243090 CDS NP_869801.1 32476807 1790862 6036170..6038077 1 NC_005027.1 PMID: 10964925 PMID: 7657606 best DB hits: BLAST: gb:AAF47255.1; (AE003464) CG4859 gene product [Drosophila; E=3e-18 gb:AAG33131.1; AF271666_1 (AF271666) matrix metalloproteinase 1; E=3e-18 embl:CAA78248.1; (Z12604) stromelysin-3 [Mus musculus]; E=8e-16 PFAM: PF00404; Dockerin type I repeat; E=0.0079; matrix metalloproteinase 1 6038077 1790862 RB11133 Rhodopirellula baltica SH 1 matrix metalloproteinase 1 NP_869801.1 6036170 D 243090 CDS NP_869802.1 32476808 1793763 6038191..6038868 1 NC_005027.1 PMID: 11248100 PMID: 7768826 PMID: 7889934 best DB hits: BLAST: gb:AAK03873.1; (AE006215) RpoE [Pasteurella multocida]; E=7e-07 swissprot:P44790; RPOE_HAEIN RNA POLYMERASE SIGMA-E FACTOR; E=2e-06 pir:H82073; RNA polymerase sigma-E factor VC2467 [imported] - Vibrio; E=5e-06 COG: HI0628; COG1595 DNA-directed RNA polymerase specialized sigma; E=2e-07 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=0.4; RNA polymerase sigma-E factor 6038868 rpoE 1793763 rpoE Rhodopirellula baltica SH 1 RNA polymerase sigma-E factor NP_869802.1 6038191 D 243090 CDS NP_869803.1 32476809 1794178 6038799..6041537 1 NC_005027.1 PMID: 1835671 best DB hits: BLAST: pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=1e-31 embl:CAA10713.1; (AJ132604) hypothetical protein [Lactococcus; E=1e-31 pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=3e-31 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=3e-32 PFAM: PF00069; Protein kinase domain; E=9.9e-29 PF00515; TPR Domain; E=0.0026; serine/threonine protein kinase 6041537 1794178 RB11136 Rhodopirellula baltica SH 1 serine/threonine protein kinase NP_869803.1 6038799 D 243090 CDS NP_869804.1 32476810 1795543 6041524..6042972 1 NC_005027.1 hypothetical protein 6042972 1795543 RB11137 Rhodopirellula baltica SH 1 hypothetical protein NP_869804.1 6041524 D 243090 CDS NP_869805.1 32476811 1794403 6043192..6044637 1 NC_005027.1 best DB hits: PFAM: PF01011; PQQ enzyme repeat; E=0.34; signal peptide 6044637 1794403 RB11142 Rhodopirellula baltica SH 1 signal peptide NP_869805.1 6043192 D 243090 CDS NP_869806.1 32476812 1792749 complement(6044594..6044779) 1 NC_005027.1 hypothetical protein 6044779 1792749 RB11145 Rhodopirellula baltica SH 1 hypothetical protein NP_869806.1 6044594 R 243090 CDS NP_869807.1 32476813 1794979 6044754..6045629 1 NC_005027.1 PMID: 97000351 PMID: 2380986 best DB hits: BLAST: embl:CAB92202.1; (AL356592) hydrolase. [Streptomyces; E=2e-33 pir:D70881; hypothetical protein Rv2765 - Mycobacterium tuberculosis; E=3e-29 embl:CAC04055.1; (AL391406) hydrolase (dienelactone; E=9e-23 COG: Rv2765; COG0412 Dienelactone hydrolase and related enzymes; E=3e-30 PFAM: PF02277; Phosphoribosyltransferase; E=0.45 PF00561; alpha/beta hydrolase fold; E=0.6 PF01738; Dienelactone hydrolase; E=2e-34; hydrolase 6045629 1794979 RB11146 Rhodopirellula baltica SH 1 hydrolase NP_869807.1 6044754 D 243090 CDS NP_869808.1 32476814 1790810 6045769..6046419 1 NC_005027.1 PMID: 10567266 PMID: 9537360 PMID: 8003493 best DB hits: BLAST: pir:F75607; arsenate reductase - Deinococcus radiodurans (strain R1); E=1e-04 swissprot:P45947; ARSC_BACSU ARSENATE REDUCTASE (ARSENICAL PUMP; E=0.001 pir:B70360; arsenate reductase - Aquifex aeolicus ----- gb:; E=0.014 COG: DRA0123; COG0394 Protein-tyrosine-phosphatase; E=1e-05; arsenate reductase 6046419 arsC 1790810 arsC Rhodopirellula baltica SH 1 arsenate reductase NP_869808.1 6045769 D 243090 CDS NP_869809.1 32476815 1793475 complement(6046601..6046921) 1 NC_005027.1 hypothetical protein 6046921 1793475 RB11149 Rhodopirellula baltica SH 1 hypothetical protein NP_869809.1 6046601 R 243090 CDS NP_869810.1 32476816 1791563 6046862..6048019 1 NC_005027.1 PMID: 10515912 best DB hits: BLAST: pir:D83102; xenobiotic reductase PA4356 [imported] - Pseudomonas; E=5e-92 ddbj:BAA88211.1; (AB025798) NAD(P)H-dependent 2-cyclohexen-1-one; E=1e-91 gb:AAF02539.1; AF154062_1 (AF154062) xenobiotic reductase B; E=1e-87 COG: PA4356; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme; E=4e-93 nemA; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family; E=2e-73 PA2932; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme; E=3e-70 PFAM: PF00724; NADH:flavin oxidoreductase / NAD; E=5.6e-98; xenobiotic reductase B 6048019 1791563 RB11150 Rhodopirellula baltica SH 1 xenobiotic reductase B NP_869810.1 6046862 D 243090 CDS NP_869811.1 32476817 1794769 6048095..6049105 1 NC_005027.1 PMID: 87304248 PMID: 92277668 best DB hits: BLAST: pir:S76928; probable aryl alcohol dehydrogenase (EC 1.1.1.-) -; E=1e-94 pir:S56495; probable aryl alcohol dehydrogenase (EC 1.1.1.-) yjgB -; E=6e-71 swissprot:P27250; YJGB_ECOLI HYPOTHETICAL ZINC-TYPE ALCOHOL; E=6e-71 COG: slr1192; COG1064 Zn-dependent alcohol dehydrogenases; E=9e-96 PFAM: PF00899; ThiF family; E=0.48 PF02826; D-isomer specific 2-hydroxyacid; E=0.48 PF00107; Zinc-binding dehydrogenases; E=5.9e-85; zinc-type alcohol dehydrogenase 6049105 yjgB 1794769 yjgB Rhodopirellula baltica SH 1 zinc-type alcohol dehydrogenase NP_869811.1 6048095 D 243090 CDS NP_869812.1 32476818 1794595 complement(6049159..6052266) 1 NC_005027.1 PMID: 2678100 best DB hits: BLAST: pir:H82300; probable multidrug resistance protein VC0629 [imported] -; E=3e-51 pir:S76433; cation efflux system protein czcA-2 - Synechocystis sp.; E=4e-42 pir:G64595; acriflavine resistance protein - Helicobacter pylori; E=4e-41 COG: VC0629; COG0841 Cation/multidrug efflux pump; E=3e-52 PFAM: PF00873; AcrB/AcrD/AcrF family; E=1e-43; multidrug resistance protein 6052266 czcA 1794595 czcA Rhodopirellula baltica SH 1 multidrug resistance protein NP_869812.1 6049159 R 243090 CDS NP_869813.1 32476819 1796098 complement(6052263..6053573) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:A83330; probable RND efflux membrane fusion protein precursor; E=2e-06 gb:AAG57137.1; AE005434_1 (AE005434) membrane protein; E=2e-06 ddbj:BAA15928.1; (D90845) Membrane fusion protein MtrC precursor.; E=4e-06 COG: PA2528; COG0845 Membrane-fusion protein; E=2e-07 PA3892; COG1566 Multidrug resistance efflux pump; E=1e-05 VC0628; COG0845 Membrane-fusion protein; E=4e-05 PFAM: PF00529; HlyD family secretion protein; E=4.2e-07; RND efflux membrane fusion protein precursor 6053573 1796098 RB11154 Rhodopirellula baltica SH 1 RND efflux membrane fusion protein precursor NP_869813.1 6052263 R 243090 CDS NP_869814.1 32476820 1794427 complement(6053518..6055002) 1 NC_005027.1 PMID: 10225861 best DB hits: BLAST: pir:A83347; probable outer membrane protein PA2391 [imported] -; E=1e-24 pir:F83329; probable outer membrane lipoprotein precursor PA2525; E=2e-23 gb:AAD05185.1; (AF110185) unknown [Burkholderia pseudomallei]; E=4e-23 COG: PA2391; COG1538 Outer membrane protein; E=1e-25 PFAM: PF02321; Outer membrane efflux protein; E=1.3e-18; hypothetical protein 6055002 ibeB 1794427 ibeB Rhodopirellula baltica SH 1 hypothetical protein NP_869814.1 6053518 R 243090 CDS NP_869815.1 32476821 1795283 complement(6055022..6056074) 1 NC_005027.1 PMID: 1729216 PMID: 9532806 PMID: 2253626 PMID: 9295270 best DB hits: BLAST: pir:T35404; probable squalene-hopene cyclase - Streptomyces; E=1e-04 pir:A43300; squalene-hopene cyclase (EC 5.4.99.-) - Alicyclobacillus; E=0.008 gb:AAA75452.1; (M73834) squalene-hopene-cyclase [Alicyclobacillus; E=0.008 PFAM: PF01264; Chorismate synthase; E=0.74 PF00432; Prenyltransferase and squalen; E=0.00015; squalene-hopene cyclase 6056074 1795283 RB11156 Rhodopirellula baltica SH 1 squalene-hopene cyclase NP_869815.1 6055022 R 243090 CDS NP_869816.1 32476822 1790697 complement(6056146..6056496) 1 NC_005027.1 PMID: 8674982 best DB hits: BLAST: pir:C81247; arsenate reductase NMB0005 [imported] - Neisseria; E=8e-26 gb:AAG57605.1; AE005479_3 (AE005479) oxidoreductase; E=6e-25 swissprot:P76569; YFGD_ECOLI PROTEIN YFGD ----- pir: F65025; E=6e-25 COG: NMB0005; COG1393 Arsenate reductase and related proteins,; E=8e-27 yfgD; COG1393 Arsenate reductase and related proteins, glutaredoxin; E=7e-26 VC2165; COG1393 Arsenate reductase and related proteins,; E=3e-25; arsenate reductase 6056496 arsC 1790697 arsC Rhodopirellula baltica SH 1 arsenate reductase NP_869816.1 6056146 R 243090 CDS NP_869817.1 32476823 1793406 complement(6056587..6057378) 1 NC_005027.1 PMID: 11337471 best DB hits: BLAST: gb:AAK04894.1; AE006313_1 (AE006313) HYPOTHETICAL PROTEIN; E=0.051 pir:T02333; hypothetical protein F13P17.29 - Arabidopsis thaliana; E=0.093 pir:T34378; hypothetical protein T25G12.7 - Caenorhabditis elegans; E=0.095 PFAM: PF01118; Semialdehyde dehydrogenase, NA; E=0.095; hypothetical protein 6057378 1793406 RB11160 Rhodopirellula baltica SH 1 hypothetical protein NP_869817.1 6056587 R 243090 CDS NP_869818.1 32476824 1793139 complement(6057379..6059295) 1 NC_005027.1 hypothetical protein 6059295 1793139 RB11162 Rhodopirellula baltica SH 1 hypothetical protein NP_869818.1 6057379 R 243090 CDS NP_869819.1 32476825 1790892 complement(6059348..6060913) 1 NC_005027.1 PMID: 20138370 best DB hits: BLAST: pir:B81280; probable periplasmic cytochrome C Cj1357c [imported] -; E=1e-50 embl:CAB53160.1; (AJ245540) catalytic subunit of cytochrome c; E=5e-42 embl:CAB37320.1; (AJ133037) cytochrome c nitrite reductase; E=5e-37 COG: Cj1357c; COG3303 Nitrite reductase, periplasmic cytochrome c subunit; E=9e-52 PFAM: PF02335; Cytochrome c552; E=0.032; catalytic subunit of cytochrome c nitrite reductase 6060913 nrfA 1790892 nrfA Rhodopirellula baltica SH 1 catalytic subunit of cytochrome c nitrite reductase NP_869819.1 6059348 R 243090 CDS NP_869820.1 32476826 1793689 complement(6060983..6061519) 1 NC_005027.1 PMID: 20138370 best DB hits: BLAST: pir:C81280; probable periplasmic cytochrome C Cj1358c [imported] -; E=1e-21 embl:CAB53159.1; (AJ245540) small subunit of cytochrome c nitrite; E=1e-18 pir:A82138; cytochrome c-type protein YecK VC1951 [imported] -; E=1e-05 COG: Cj1358c; COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme; E=1e-22; small subunit of cytochrome c nitrite reductase 6061519 nrfC 1793689 nrfC Rhodopirellula baltica SH 1 small subunit of cytochrome c nitrite reductase NP_869820.1 6060983 R 243090 CDS NP_869821.1 32476827 1794749 complement(6061728..6062177) 1 NC_005027.1 PMID: 20086437 best DB hits: BLAST: pir:S76179; hypothetical protein - Synechocystis sp. (strain PCC; E=3e-04 embl:CAA76284.1; (Y16560) MPT-synthase sulfurylase [Synechococcus; E=4e-04 gb:AAF33130.1; AF196567_6 (AF196567) sulfurylase; E=0.003 COG: sll1536_2; COG0607 Rhodanese-related sulfurtransferases; E=3e-05 PFAM: PF00581; Rhodanese-like domain; E=2.8e-06; MPT-synthase sulfurylase 6062177 moaB 1794749 moaB Rhodopirellula baltica SH 1 MPT-synthase sulfurylase NP_869821.1 6061728 R 243090 CDS NP_869822.1 32476828 1792817 6062211..6062405 1 NC_005027.1 hypothetical protein 6062405 1792817 RB11169 Rhodopirellula baltica SH 1 hypothetical protein NP_869822.1 6062211 D 243090 CDS NP_869823.1 32476829 1794044 6062402..6063142 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:D75273; transcriptional regulator, MerR family - Deinococcus; E=9e-08 embl:CAB61592.1; (AL133210) DNA polymerase III beta; E=1e-05 embl:CAB88450.1; (AL353815) merR-family transcriptional; E=1e-05 COG: DR2448; COG0789 Predicted transcriptional regulators; E=8e-09; MerR family transcriptional regulator 6063142 merR 1794044 merR Rhodopirellula baltica SH 1 MerR family transcriptional regulator NP_869823.1 6062402 D 243090 CDS NP_869824.1 32476830 1790573 6063194..6063586 1 NC_005027.1 PMID: 9679194 best DB hits: BLAST: pir:F71051; hypothetical protein PH1109 - Pyrococcus horikoshii; E=3e-12 pir:H72254; conserved hypothetical protein - Thermotoga maritima; E=6e-12 pir:F75091; hypothetical protein PAB1624 - Pyrococcus abyssi (strain; E=8e-12 COG: PH1109; COG1832 Uncharacterized ACR; E=3e-13 AF0932; COG1042 Acyl-CoA synthetase (NDP forming); E=8e-11 Ta1005; COG1832 Uncharacterized ACR; E=2e-09 PFAM: PF02629; Uncharacterized ACR, COG1832; E=4e-13; hypothetical protein 6063586 1790573 RB11173 Rhodopirellula baltica SH 1 hypothetical protein NP_869824.1 6063194 D 243090 CDS NP_869825.1 32476831 1792467 complement(6063637..6065046) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:E75584; conserved hypothetical protein - Deinococcus radiodurans; E=2e-54 ddbj:BAA86645.1; (AB033763) hypothetical protein [Staphylococcus; E=4e-45 pir:T44111; conserved hypothetical protein [imported] -; E=2e-33 COG: DRA0304_1; COG0491 Zn-dependent hydrolases, including glyoxylases; E=5e-42 MTH1096; COG0607 Rhodanese-related sulfurtransferases; E=6e-17 BS_yrkH; COG0491 Zn-dependent hydrolases, including glyoxylases; E=2e-16 PFAM: PF00753; Metallo-beta-lactamase superfamil; E=6.1e-25 PF00581; Rhodanese-like domain; E=0.0017; hypothetical protein 6065046 1792467 RB11174 Rhodopirellula baltica SH 1 hypothetical protein NP_869825.1 6063637 R 243090 CDS NP_869826.1 32476832 1796904 complement(6065144..6065605) 1 NC_005027.1 PMID: 20365717 best DB hits: BLAST: pir:E82766; conserved hypothetical protein XF0768 [imported] -; E=2e-09 pir:C81827; hypothetical protein NMA1982 [imported] - Neisseria; E=8e-04 pir:F81048; conserved hypothetical protein NMB1727 [imported] -; E=0.001; hypothetical protein 6065605 1796904 RB11176 Rhodopirellula baltica SH 1 hypothetical protein NP_869826.1 6065144 R 243090 CDS NP_869827.1 32476833 1794070 6065633..6065842 1 NC_005027.1 hypothetical protein 6065842 1794070 RB11177 Rhodopirellula baltica SH 1 hypothetical protein NP_869827.1 6065633 D 243090 CDS NP_869828.1 32476834 1793338 6065843..6066880 1 NC_005027.1 PMID: 8688087 best DB hits: BLAST: swissprot:Q57951; Y531_METJA HYPOTHETICAL PROTEIN MJ0531 -----; E=4e-10 ddbj:BAB03102.1; (AP002040) gene_id:MEC18.3~unknown protein; E=2e-08 pir:A69220; conserved hypothetical protein MTH898 - Methanobacterium; E=2e-08 COG: MJ0531; COG0589 Universal stress protein UspA and related; E=4e-11 PFAM: PF00582; Universal stress protein family; E=3.9e-11; universal stress protein 6066880 uspA 1793338 uspA Rhodopirellula baltica SH 1 universal stress protein NP_869828.1 6065843 D 243090 CDS NP_869829.1 32476835 1792491 6067002..6067109 1 NC_005027.1 signal peptide 6067109 1792491 RB11181 Rhodopirellula baltica SH 1 signal peptide NP_869829.1 6067002 D 243090 CDS NP_869830.1 32476836 1794363 complement(6067293..6068240) 1 NC_005027.1 PMID: 9371463 best DB hits: BLAST: pir:A69220; conserved hypothetical protein MTH898 - Methanobacterium; E=1e-07 gb:AAD46412.1; AF096262_1 (AF096262) ER6 protein [Lycopersicon; E=1e-05 gb:AAK04173.1; AE006246_3 (AE006246) conserved hypothetical; E=2e-05 COG: MTH898; COG0589 Universal stress protein UspA and related; E=1e-08 PFAM: PF00582; Universal stress protein family; E=4e-11; hypothetical protein 6068240 uspA 1794363 uspA Rhodopirellula baltica SH 1 hypothetical protein NP_869830.1 6067293 R 243090 CDS NP_869831.1 32476837 1793668 complement(6068316..6068441) 1 NC_005027.1 signal peptide 6068441 1793668 RB11184 Rhodopirellula baltica SH 1 signal peptide NP_869831.1 6068316 R 243090 CDS NP_869832.1 32476838 1792757 complement(6068431..6069342) 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: swissprot:P74148; YD88_SYNY3 HYPOTHETICAL 17.3 KD PROTEIN SLL1388; E=2e-05 gb:AAG20091.1; (AE005088) Vng1898c [Halobacterium sp. NRC-1]; E=5e-05 swissprot:Q57951; Y531_METJA HYPOTHETICAL PROTEIN MJ0531 -----; E=7e-04 COG: sll1388; COG0589 Universal stress protein UspA and related; E=2e-06 PFAM: PF00582; Universal stress protein family; E=0.04; universal stress protein 6069342 uspA 1792757 uspA Rhodopirellula baltica SH 1 universal stress protein NP_869832.1 6068431 R 243090 CDS NP_869833.1 32476839 1790150 complement(6069339..6070814) 1 NC_005027.1 best DB hits: BLAST: gb:AAG45333.1; AF273214_1 (AF273214) SasR [Myxococcus xanthus]; E=3e-83 swissprot:Q06065; ATOC_ECOLI ACETOACETATE METABOLISM REGULATORY; E=1e-81 gb:AAC28085.1; (AF100457) response regulator [Myxococcus xanthus]; E=5e-80 COG: atoC; COG2204 AAA superfamily ATPases with N-terminal receiver; E=1e-82 PFAM: PF00072; Response regulator receiver doma; E=2.7e-32 PF00158; Sigma-54 interaction domain; E=1.1e-119; NtrC-like response regulator SasR 6070814 sasR 1790150 sasR Rhodopirellula baltica SH 1 NtrC-like response regulator SasR NP_869833.1 6069339 R 243090 CDS NP_869834.1 32476840 1795920 complement(6070940..6071212) 1 NC_005027.1 hypothetical protein 6071212 1795920 RB11190 Rhodopirellula baltica SH 1 hypothetical protein NP_869834.1 6070940 R 243090 CDS NP_869835.1 32476841 1793674 6071180..6072646 1 NC_005027.1 PMID: 2666400 PMID: 11243806 best DB hits: BLAST: gb:AAG59806.1; AF305914_1 (AF305914) HydH [Klebsiella oxytoca]; E=2e-23 gb:AAG09417.1; AF180147_9 (AF180147) bZIP histidine kinase TobS; E=5e-23 embl:CAB43735.1; (Y18245) bZIP histidine kinase [Pseudomonas; E=6e-23 COG: BH1920; COG0642 Sensory transduction histidine kinases; E=2e-22 PFAM: PF00072; Response regulator receiver doma; E=1.2e-21 PF00989; PAS domain; E=1e-08 PF00785; PAC motif; E=0.053; sensor kinase of the HydH/G two-component system 6072646 hydH 1793674 hydH Rhodopirellula baltica SH 1 sensor kinase of the HydH/G two-component system NP_869835.1 6071180 D 243090 CDS NP_869836.1 32476842 1793038 complement(6072695..6073078) 1 NC_005027.1 PMID: 2155230 best DB hits: BLAST: pir:A83631; conserved hypothetical protein PA0128 [imported] -; E=2e-34 swissprot:P16680; PHNA_ECOLI PHNA PROTEIN ----- pir: B35718; E=5e-29 pir:F82023; PhnA protein homolog NMA0283 [imported] - Neisseria; E=3e-27 COG: PA0128; COG2824 Uncharacterized Zn-ribbon-containing protein; E=2e-35 phnA; COG2824 Uncharacterized Zn-ribbon-containing protein involved; E=5e-30 NMB0037; COG2824 Uncharacterized Zn-ribbon-containing protein; E=2e-27; PhnA protein 6073078 phnA 1793038 phnA Rhodopirellula baltica SH 1 PhnA protein NP_869836.1 6072695 R 243090 CDS NP_869837.1 32476843 1793875 6073112..6074515 1 NC_005027.1 best DB hits: PFAM: PF01485; IBR domain; E=0.38; hypothetical protein 6074515 1793875 RB11195 Rhodopirellula baltica SH 1 hypothetical protein NP_869837.1 6073112 D 243090 CDS NP_869838.1 32476844 1792473 complement(6073532..6074206) 1 NC_005027.1 best DB hits: BLAST: gb:AAD21990.1; (AF110998) DNA-directed DNA polymerase [snow goose; E=0.70 gb:AAD21980.1; (AF110996) DNA-directed DNA polymerase [snow goose; E=0.75 gb:AAD21985.1; (AF110997) DNA-directed DNA polymerase [snow goose; E=0.75; DNA-directed DNA polymerase 6074206 1792473 RB11199 Rhodopirellula baltica SH 1 DNA-directed DNA polymerase NP_869838.1 6073532 R 243090 CDS NP_869839.1 32476845 1795913 complement(6074761..6075201) 1 NC_005027.1 PMID: 7699720 PMID: 9278513 best DB hits: BLAST: embl:CAB62661.1; (AL133422) hypothetical protein SCM1.03c.; E=8e-33 pir:D75276; response regulator - Deinococcus radiodurans (strain R1); E=1e-31 swissprot:Q55169; RCP1_SYNY3 RESPONSE REGULATOR RCP1 -----; E=1e-25 COG: DR2420; COG0784 CheY-like receiver domains; E=1e-32 slr0115; COG0745 Response regulators consisting of a CheY-like; E=2e-09 sll0039; COG0784 CheY-like receiver domains; E=6e-09 PFAM: PF00072; Response regulator receiver doma; E=6.5e-19; response regulator rcp1 6075201 rcp1 1795913 rcp1 Rhodopirellula baltica SH 1 response regulator rcp1 NP_869839.1 6074761 R 243090 CDS NP_869840.1 32476846 1793407 complement(6075155..6076903) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:C75276; sensory box sensor histidine kinase - Deinococcus; E=8e-45 swissprot:Q55168; PHY1_SYNY3 PHYTOCHROME-LIKE PROTEIN CPH1; E=1e-41 embl:CAB62662.1; (AL133422) two-component sensor; E=2e-41 COG: DR2419_2; COG0642 Sensory transduction histidine kinases; E=8e-46 PFAM: PF00512; His Kinase A (phosphoacceptor) doma; E=1e-12 PF02518; Histidine kinase-, DNA gyrase B-, p; E=3.5e-35; light-regulated histidine kinase 1 6076903 cph1 1793407 cph1 Rhodopirellula baltica SH 1 light-regulated histidine kinase 1 NP_869840.1 6075155 R 243090 CDS NP_869841.1 32476847 1794483 complement(6076852..6077364) 1 NC_005027.1 hypothetical protein 6077364 1794483 RB11204 Rhodopirellula baltica SH 1 hypothetical protein NP_869841.1 6076852 R 243090 CDS NP_869842.1 32476848 1793593 complement(6077380..6078903) 1 NC_005027.1 Enables the enzymatic reduction of mercuric ions to elemental mercury; mercuric reductase 6078903 merA 1793593 merA Rhodopirellula baltica SH 1 mercuric reductase NP_869842.1 6077380 R 243090 CDS NP_869843.1 32476849 1793943 complement(6078964..6080580) 1 NC_005027.1 PMID: 8590279 best DB hits: BLAST: swissprot:Q55909; Y305_SYNY3 HYPOTHETICAL 22.2 KD PROTEIN SLR0305; E=2e-40 gb:AAB72174.1; (AF000657) unknown protein [Arabidopsis thaliana]; E=3e-33 gb:AAC72122.1; (AC005278) F15K9.14 [Arabidopsis thaliana]; E=1e-27 COG: slr0305; COG0398 Uncharacterized ACR; E=2e-41 aq_2066; COG1238 Uncharacterized membrane protein; E=7e-04 BS_yhjE; COG0398 Uncharacterized ACR; E=8e-04; hypothetical protein 6080580 1793943 RB11207 Rhodopirellula baltica SH 1 hypothetical protein NP_869843.1 6078964 R 243090 CDS NP_869844.1 32476850 1791634 6080584..6081078 1 NC_005027.1 hypothetical protein 6081078 1791634 RB11208 Rhodopirellula baltica SH 1 hypothetical protein NP_869844.1 6080584 D 243090 CDS NP_869845.1 32476851 1790347 6080603..6080914 1 NC_005027.1 hypothetical protein 6080914 1790347 RB11209 Rhodopirellula baltica SH 1 hypothetical protein NP_869845.1 6080603 D 243090 CDS NP_869846.1 32476852 1795349 complement(6080653..6080955) 1 NC_005027.1 hypothetical protein 6080955 1795349 RB11210 Rhodopirellula baltica SH 1 hypothetical protein NP_869846.1 6080653 R 243090 CDS NP_869847.1 32476853 1793325 6081008..6081550 1 NC_005027.1 PMID: 9175471 PMID: 9727486 best DB hits: BLAST: gb:AAK04154.1; AE006244_3 (AE006244) HYPOTHETICAL PROTEIN; E=2e-12 pir:B82297; probable acetyltransferase VC0655 [imported] - Vibrio; E=7e-12 pir:H83557; hypothetical protein PA0711 [imported] - Pseudomonas; E=2e-11 COG: VC0655; COG3153 Predicted acetyltransferase; E=7e-13 PFAM: PF00583; Acetyltransferase (GNAT) family; E=1.1e-16; acetyltransferase yjhQ 6081550 yjhQ 1793325 yjhQ Rhodopirellula baltica SH 1 acetyltransferase yjhQ NP_869847.1 6081008 D 243090 CDS NP_869848.1 32476854 1794971 6081689..6081943 1 NC_005027.1 PMID: 2106913 PMID: 3932661 PMID: 2506358 PMID: 2600971 best DB hits: BLAST: embl:CAC04216.1; (AL391515) ferredoxin [Streptomyces coelicolor; E=3e-16 embl:CAC05765.1; (AL391751) ferredoxin [Streptomyces; E=6e-16 swissprot:P13279; FER_STRGR FERREDOXIN ----- pir: S08287; E=2e-15 COG: Rv1177; COG1146 Ferredoxin 3; E=7e-16 VC1512; COG0437 Fe-S-cluster-containing hydrogenase components 1; E=5e-05 Rv0886_1; COG1146 Ferredoxin 3; E=2e-04 PFAM: PF00037; 4Fe-4S binding domain; E=1.9e-07; ferredoxin 6081943 1794971 RB11216 Rhodopirellula baltica SH 1 ferredoxin NP_869848.1 6081689 D 243090 CDS NP_869849.1 32476855 1795879 complement(6081958..6083022) 1 NC_005027.1 PMID: 11315111 best DB hits: BLAST: gb:AAB89527.1; (AE000984) dinitrogenase reductase activating; E=8e-11 pir:JC4745; ADP-ribosyl-nitrogenase hydrolase (EC 3.2.2.24) - rice; E=1e-06 pir:I39752; ADP-ribosyl-nitrogenase hydrolase (EC 3.2.2.24) -; E=1e-06 COG: AF1724; COG1397 ADP-ribosylglycohydrolase; E=7e-12; dinitrogenase reductase activating glycohydrolase (draG) 6083022 1795879 RB11217 Rhodopirellula baltica SH 1 dinitrogenase reductase activating glycohydrolase (draG) NP_869849.1 6081958 R 243090 CDS NP_869850.1 32476856 1794695 complement(6083086..6083640) 1 NC_005027.1 PMID: 9915792 best DB hits: BLAST: swissprot:Q9ZBX9; KPTA_STRCO PROBABLE RNA 2'-PHOSPHOTRANSFERASE; E=3e-42 swissprot:Q9I778; KPTA_PSEAE PROBABLE RNA 2'-PHOSPHOTRANSFERASE; E=5e-42 pir:S56556; hypothetical 24.6K protein (iadA-mcrD intergenic region); E=1e-41 COG: PA0054; COG1859 Uncharacterized ACR; E=4e-43 PFAM: PF01885; Domain of unknown function DUF60; E=9.2e-62; RNA 2-phosphotransferase 6083640 1794695 RB11219 Rhodopirellula baltica SH 1 RNA 2-phosphotransferase NP_869850.1 6083086 R 243090 CDS NP_869851.1 32476857 1790865 complement(6083673..6084044) 1 NC_005027.1 hypothetical protein 6084044 1790865 RB11221 Rhodopirellula baltica SH 1 hypothetical protein NP_869851.1 6083673 R 243090 CDS NP_869852.1 32476858 1792553 complement(6084059..6084187) 1 NC_005027.1 hypothetical protein 6084187 1792553 RB11222 Rhodopirellula baltica SH 1 hypothetical protein NP_869852.1 6084059 R 243090 CDS NP_869853.1 32476859 1791605 6084224..6084586 1 NC_005027.1 PMID: 8451191 PMID: 8506147 best DB hits: BLAST: pir:E70585; probable transcriptional regulator Rv2358 - Mycobacterium; E=4e-07 pir:B70850; probable transcriptional regulator Rv0081 - Mycobacterium; E=5e-07 gb:AAG02351.1; AF210249_10 (AF210249) metal-dependent regulatory; E=1e-06 COG: Rv2358; COG0640 Predicted transcriptional regulators; E=4e-08 PFAM: PF01022; Bacterial regulatory protein, arsR f; E=1.3e-13; metal-dependent regulatory protein 6084586 arsR 1791605 arsR Rhodopirellula baltica SH 1 metal-dependent regulatory protein NP_869853.1 6084224 D 243090 CDS NP_869854.1 32476860 1791011 6084698..6085243 1 NC_005027.1 PMID: 9733650 PMID: 8702871 best DB hits: BLAST: swissprot:P73801; YC61_SYNY3 HYPOTHETICAL 19.1 KD PROTEIN SLR1261; E=5e-25 embl:CAB62750.1; (AL133424) hypothetical protein SCF56.05; E=6e-17 swissprot:P55734; YGAP_ECOLI HYPOTHETICAL 18.6 KD PROTEIN IN; E=2e-14 COG: slr1261; COG0607 Rhodanese-related sulfurtransferases; E=5e-26 PFAM: PF00581; Rhodanese-like domain; E=2.1e-15; hypothetical protein 6085243 1791011 RB11225 Rhodopirellula baltica SH 1 hypothetical protein NP_869854.1 6084698 D 243090 CDS NP_869855.1 32476861 1790574 6085171..6086055 1 NC_005027.1 best DB hits: BLAST: pir:H83213; hypothetical protein PA3457 [imported] - Pseudomonas; E=1e-08 pir:S74895; hypothetical protein slr1262 - Synechocystis sp. (strain; E=4e-08 pir:H70015; hypothetical protein yunE - Bacillus subtilis -----; E=2e-04 COG: PA3457; COG0730 Predicted permeases; E=1e-09 PFAM: PF01925; Domain of unknown function DUF81; E=3.5e-12; hypothetical protein 6086055 1790574 RB11226 Rhodopirellula baltica SH 1 hypothetical protein NP_869855.1 6085171 D 243090 CDS NP_869856.1 32476862 1791422 6086085..6087509 1 NC_005027.1 PMID: 7588620 best DB hits: BLAST: ddbj:BAA86645.1; (AB033763) hypothetical protein [Staphylococcus; E=9e-94 pir:E75584; conserved hypothetical protein - Deinococcus radiodurans; E=3e-90 pir:T44111; conserved hypothetical protein [imported] -; E=2e-76 COG: DRA0304_1; COG0491 Zn-dependent hydrolases, including glyoxylases; E=3e-63 DRA0304_2; COG0607 Rhodanese-related sulfurtransferases; E=2e-22 BS_yrkH; COG0491 Zn-dependent hydrolases, including glyoxylases; E=2e-17 PFAM: PF00753; Metallo-beta-lactamase superfamil; E=7.1e-27 PF00581; Rhodanese-like domain; E=0.02; hypothetical protein 6087509 1791422 RB11227 Rhodopirellula baltica SH 1 hypothetical protein NP_869856.1 6086085 D 243090 CDS NP_869857.1 32476863 1791458 complement(6087471..6087599) 1 NC_005027.1 hypothetical protein 6087599 1791458 RB11228 Rhodopirellula baltica SH 1 hypothetical protein NP_869857.1 6087471 R 243090 CDS NP_869858.1 32476864 1790770 6087671..6088150 1 NC_005027.1 PMID: 2276500 PMID: 1904771 PMID: 8695634 PMID: 8526846 PMID: 7664064 PMID: 7559480 best DB hits: BLAST: swissprot:Q59738; BFR_RHOCA BACTERIOFERRITIN (BFR) ----- embl:; E=9e-22 swissprot:P49944; BFR_BRUME BACTERIOFERRITIN (BFR) ----- pir:; E=4e-21 pir:H82810; bacterioferritin XF0395 [imported] - Xylella fastidiosa; E=7e-19 COG: XF0395; COG2193 Bacterioferritin (cytochrome b1); E=7e-20 BS_yhjR; COG1633 Uncharacterized ACR; E=0.004 AF0832; COG1592 Rubrerythrin; E=0.009 PFAM: PF01334; Bacterioferritin; E=9.1e-39; bacterioferritin 6088150 bfr 1790770 bfr Rhodopirellula baltica SH 1 bacterioferritin NP_869858.1 6087671 D 243090 CDS NP_869859.1 32476865 1790781 6088214..6089386 1 NC_005027.1 best DB hits: BLAST: gb:AAB90342.1; (AE001041) A. fulgidus predicted coding region; E=0.001 COG: AF0913; COG1416 Uncharacterized ACR; E=1e-04 PFAM: PF01406; tRNA synthetases class I (C); E=0.52; hypothetical protein 6089386 1790781 RB11231 Rhodopirellula baltica SH 1 hypothetical protein NP_869859.1 6088214 D 243090 CDS NP_869860.1 32476866 1793411 complement(6089453..6090340) 1 NC_005027.1 hypothetical protein 6090340 1793411 RB11233 Rhodopirellula baltica SH 1 hypothetical protein NP_869860.1 6089453 R 243090 CDS NP_869861.1 32476867 1791217 6090398..6090991 1 NC_005027.1 hypothetical protein 6090991 1791217 RB11235 Rhodopirellula baltica SH 1 hypothetical protein NP_869861.1 6090398 D 243090 CDS NP_869862.1 32476868 1794948 6091005..6091187 1 NC_005027.1 hypothetical protein 6091187 1794948 RB11236 Rhodopirellula baltica SH 1 hypothetical protein NP_869862.1 6091005 D 243090 CDS NP_869863.1 32476869 1793157 6091324..6092547 1 NC_005027.1 PMID: 2249654 PMID: 2184029 best DB hits: BLAST: gb:AAG09628.1; (AY007258) CztB [Pseudomonas fluorescens]; E=6e-17 pir:F83330; RND divalent metal cation efflux membrane fusion protein; E=2e-15 embl:CAB56470.1; (Y14018) czrB protein [Pseudomonas aeruginosa]; E=2e-14 COG: PA2521; COG0845 Membrane-fusion protein; E=1e-16 PFAM: PF00364; Biotin-requiring enzyme; E=4.2e-05 PF00529; HlyD family secretion protein; E=0.37; cobalt-zinc-cadmium resistance protein 6092547 czcB 1793157 czcB Rhodopirellula baltica SH 1 cobalt-zinc-cadmium resistance protein NP_869863.1 6091324 D 243090 CDS NP_869864.1 32476870 1793231 6092544..6095705 1 NC_005027.1 PMID: 8829543 best DB hits: BLAST: swissprot:P94177; CZCA_ALCSP CATION EFFLUX SYSTEM PROTEIN CZCA; E=0.0 pir:A33830; cation efflux system membrane protein czcA - Alcaligenes; E=0.0 swissprot:P13511; CZCA_ALCEU COBALT-ZINC-CADMIUM RESISTANCE PROTEIN; E=0.0 COG: PA2520; COG0841 Cation/multidrug efflux pump; E=0.0 PFAM: PF00804; Syntaxin; E=0.39 PF00873; AcrB/AcrD/AcrF family; E=0; cation efflux system protein CZCA 6095705 czcA 1793231 czcA Rhodopirellula baltica SH 1 cation efflux system protein CZCA NP_869864.1 6092544 D 243090 CDS NP_869865.1 32476871 1794208 6095778..6096383 1 NC_005027.1 PMID: 3052291 PMID: 8052622 best DB hits: BLAST: embl:CAC01348.1; (AL390975) ECF-subfamily sigma factor; E=9e-08 gb:AAC45221.1; (U87307) extracytoplasmic function alternative; E=1e-04 embl:CAC17654.1; (AL450450) ECF sigma factor; E=1e-04 COG: Rv1221; COG1595 DNA-directed RNA polymerase specialized sigma; E=6e-05 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=3.3e-10; extracytoplasmic function alternative sigma factor 6096383 sigE 1794208 sigE Rhodopirellula baltica SH 1 extracytoplasmic function alternative sigma factor NP_869865.1 6095778 D 243090 CDS NP_869866.1 32476872 1793518 6096365..6098935 1 NC_005027.1 PMID: 1956325 PMID: 1835513 PMID: 3291115 best DB hits: BLAST: ddbj:BAB06223.1; (AP001515) serinethreonine protein kinase; E=1e-44 pir:T36501; probable serinethreonine protein kinase - Streptomyces; E=7e-43 pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=3e-42 COG: BH2504_1; COG0515 Serine/threonine protein kinases; E=1e-45 PFAM: PF00069; Protein kinase domain; E=2.2e-50; serine/threonine protein kinase 6098935 1793518 RB11244 Rhodopirellula baltica SH 1 serine/threonine protein kinase NP_869866.1 6096365 D 243090 CDS NP_869867.1 32476873 1796829 complement(6098965..6099126) 1 NC_005027.1 hypothetical protein 6099126 1796829 RB11245 Rhodopirellula baltica SH 1 hypothetical protein NP_869867.1 6098965 R 243090 CDS NP_869868.1 32476874 1794798 complement(6099130..6100293) 1 NC_005027.1 PMID: 2229036 PMID: 3762694 PMID: 1542576 best DB hits: BLAST: pir:B83548; hypothetical protein PA0787 [imported] - Pseudomonas; E=2e-96 gb:AAG45955.1; AF282921_1 (AF282921) RecF protein; E=7e-35 gb:AAB90237.1; (AE001034) A. fulgidus predicted coding region; E=0.005 PFAM: PF00005; ABC transporter; E=0.0014 PF00470; RecF protein; E=0.34 PF02463; SMC domain N terminal domain; E=0.11; RecF protein 6100293 1794798 RB11247 Rhodopirellula baltica SH 1 RecF protein NP_869868.1 6099130 R 243090 CDS NP_869869.1 32476875 1790693 complement(6100290..6101252) 1 NC_005027.1 best DB hits: BLAST: pir:T37506; protein-S-isoprenylcysteine O-methyltransferase (EC; E=0.095; protein-S-isoprenylcysteine methyltransferase 6101252 1790693 RB11248 Rhodopirellula baltica SH 1 protein-S-isoprenylcysteine methyltransferase NP_869869.1 6100290 R 243090 CDS NP_869870.1 32476876 1792375 complement(6101311..6102588) 1 NC_005027.1 best DB hits: BLAST: swissprot:P29679; TESA_ECOLI ACYL-COA THIOESTERASE I PRECURSOR; E=0.28 gb:AAB40248.1; (U82664) acyl-coA thioesterase I precursor; E=0.28 gb:AAG54851.1; AE005230_11 (AE005230) acyl-CoA thioesterase I; E=0.32; acyl-CoA thioesterase 6102588 1792375 RB11249 Rhodopirellula baltica SH 1 acyl-CoA thioesterase NP_869870.1 6101311 R 243090 CDS NP_869871.1 32476877 1793430 6102783..6104327 1 NC_005027.1 PMID: 20411542 best DB hits: BLAST: pir:T06288; probable cytochrome P450 T9E8.50 - Arabidopsis thaliana; E=5e-14 ddbj:BAA31438.1; (AB010393) ALK6 [Yarrowia lipolytica]; E=3e-13 pir:C81286; probable cytochrome P450 Cj1411c [imported] -; E=5e-13 COG: Cj1411c; COG2124 Cytochrome P450; E=4e-14 PFAM: PF00067; Cytochrome P450; E=1e-20; cytochrome P450 T9E850 6104327 cypX 1793430 cypX Rhodopirellula baltica SH 1 cytochrome P450 T9E850 NP_869871.1 6102783 D 243090 CDS NP_869872.1 32476878 1793233 complement(6104491..6105171) 1 NC_005027.1 PMID: 8576035 PMID: 3031032 best DB hits: BLAST: prf:2206391A; phosphatidylglycerophosphate synthase [Rhodobacter; E=2e-04 gb:AAG44472.1; AF241784_1 (AF241784) CAPTase-iso [Homo sapiens]; E=7e-04 swissprot:Q50611; PGSA_MYCTU ; E=0.004 COG: Rv1822; COG0558 Phosphatidylglycerophosphate synthase; E=4e-04 PFAM: PF01066; CDP-alcohol phosphatidyltrans; E=0.00012; phosphatidylglycerophosphate synthase 6105171 pgsA 1793233 pgsA Rhodopirellula baltica SH 1 phosphatidylglycerophosphate synthase NP_869872.1 6104491 R 243090 CDS NP_869873.1 32476879 1792124 complement(6105168..6106130) 1 NC_005027.1 PMID: 2995359 PMID: 8557688 best DB hits: BLAST: gb:AAG56370.1; AE005365_4 (AE005365) phosphatidate; E=4e-24 swissprot:P76091; YNBB_ECOLI HYPOTHETICAL 33.1 KD PROTEIN IN; E=3e-22 pir:H82138; probable phosphatidate cytidylyltransferase VC1936; E=5e-22 COG: ynbB; COG0575 CDP-diglyceride synthetase; E=3e-23 PFAM: PF01148; Phosphatidate cytidylyltransfe; E=4.9e-16; phosphatidate cytidylyltransferase 6106130 1792124 RB11255 Rhodopirellula baltica SH 1 phosphatidate cytidylyltransferase NP_869873.1 6105168 R 243090 CDS NP_869874.1 32476880 1792557 complement(6106127..6106840) 1 NC_005027.1 best DB hits: BLAST: pir:C82165; conserved hypothetical protein VC1723 [imported] -; E=6e-12 swissprot:P71772; YE91_MYCTU HYPOTHETICAL 26.6 KDA PROTEIN RV1491C; E=8e-07 pir:B71448; hypothetical protein - Arabidopsis thaliana -----; E=1e-04 COG: VC1723; COG0398 Uncharacterized ACR; E=5e-13; hypothetical protein 6106840 1792557 RB11258 Rhodopirellula baltica SH 1 hypothetical protein NP_869874.1 6106127 R 243090 CDS NP_869875.1 32476881 1791029 complement(6106837..6107202) 1 NC_005027.1 PMID: 2180916 best DB hits: BLAST: pir:E81429; dksA-like protein Cj0125c [imported] - Campylobacter; E=1e-09 pir:D71366; probable dnaK suppressor - syphilis spirochete -----; E=2e-06 pir:T35472; hypothetical protein SC6C5.01 SC6C5.01 - Streptomyces; E=8e-06 COG: Cj0125c; COG1734 DnaK suppressor protein; E=2e-10 PFAM: PF01258; Prokaryotic dksA/traR C4-type zi; E=3.2e-10; dnaK (dksA-like) supressor protein 6107202 dksA 1791029 dksA Rhodopirellula baltica SH 1 dnaK (dksA-like) supressor protein NP_869875.1 6106837 R 243090 CDS NP_869876.1 32476882 1792696 complement(6107307..6108302) 1 NC_005027.1 best DB hits: BLAST: pir:D83268; conserved hypothetical protein PA3023 [imported] -; E=6e-20 swissprot:P76407; YEGS_ECOLI HYPOTHETICAL 32.0 KDA PROTEIN IN; E=9e-14 gb:AAG57146.1; AE005435_4 (AE005435) orf, hypothetical protein; E=3e-13 COG: PA3023; COG1597 Uncharacterized ACR; E=6e-21 PFAM: PF00781; Diacylglycerol kinase catalyti; E=0.0004; hypothetical protein 6108302 1792696 RB11262 Rhodopirellula baltica SH 1 hypothetical protein NP_869876.1 6107307 R 243090 CDS NP_869877.1 32476883 1793214 6108475..6109389 1 NC_005027.1 best DB hits: BLAST: pir:C69097; 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17); E=8e-16 pir:A70360; 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17); E=7e-13 pir:F69104; 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17); E=2e-11 COG: MTH1722; COG1409 Predicted phosphohydrolases; E=8e-17 APE0113; COG0420 DNA repair exonuclease; E=0.001 HI0399; COG1409 Predicted phosphohydrolases; E=0.001 PFAM: PF02549; DNA repair exonuclease; E=4.2e-06; 3',5'-cyclic-nucleotide phosphodiesterase 6109389 cpdA 1793214 cpdA Rhodopirellula baltica SH 1 3',5'-cyclic-nucleotide phosphodiesterase NP_869877.1 6108475 D 243090 CDS NP_869878.1 32476884 1795607 complement(6109475..6109768) 1 NC_005027.1 hypothetical protein 6109768 1795607 RB11268 Rhodopirellula baltica SH 1 hypothetical protein NP_869878.1 6109475 R 243090 CDS NP_869879.1 32476885 1795416 6109738..6110583 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:A83334; hypothetical protein PA2481 [imported] - Pseudomonas; E=4e-27 pir:E83075; probable cytochrome c PA4571 [imported] - Pseudomonas; E=8e-27 pir:D81360; cytochrome C Cj0874c [imported] - Campylobacter jejuni; E=8e-23 COG: PA2481; COG3258 Cytochrome c; E=4e-28; cytochrome c 6110583 1795416 RB11269 Rhodopirellula baltica SH 1 cytochrome c NP_869879.1 6109738 D 243090 CDS NP_869880.1 32476886 1793363 6110602..6110868 1 NC_005027.1 hypothetical protein 6110868 1793363 RB11271 Rhodopirellula baltica SH 1 hypothetical protein NP_869880.1 6110602 D 243090 CDS NP_869881.1 32476887 1795002 6110901..6112127 1 NC_005027.1 PMID: 8486276 best DB hits: BLAST: gb:AAD03845.1; (AF079317) unknown [Sphingomonas aromaticivorans]; E=2e-33 pir:T50593; probable membrane transport protein [imported] -; E=4e-24 pir:H83198; probable MFS transporter PA3573 [imported] - Pseudomonas; E=1e-20 COG: PA3573; COG0477 Permeases of the major facilitator superfamily; E=1e-21 PFAM: PF00083; Sugar (and other) transporter; E=1.9e-13; bicyclomycin resistance protein 6112127 bcr 1795002 bcr Rhodopirellula baltica SH 1 bicyclomycin resistance protein NP_869881.1 6110901 D 243090 CDS NP_869882.1 32476888 1795673 6112296..6115085 1 NC_005027.1 signal peptide 6115085 1795673 RB11276 Rhodopirellula baltica SH 1 signal peptide NP_869882.1 6112296 D 243090 CDS NP_869883.1 32476889 1790182 6115040..6116548 1 NC_005027.1 best DB hits: BLAST: gb:AAK03766.1; (AE006204) unknown [Pasteurella multocida]; E=0.63; related to sulfatase 6116548 1790182 RB11279 Rhodopirellula baltica SH 1 related to sulfatase NP_869883.1 6115040 D 243090 CDS NP_869884.1 32476890 1792743 complement(6116562..6116975) 1 NC_005027.1 hypothetical protein 6116975 1792743 RB11280 Rhodopirellula baltica SH 1 hypothetical protein NP_869884.1 6116562 R 243090 CDS NP_869885.1 32476891 1793608 6116951..6117670 1 NC_005027.1 signal peptide 6117670 1793608 RB11282 Rhodopirellula baltica SH 1 signal peptide NP_869885.1 6116951 D 243090 CDS NP_869886.1 32476892 1795914 complement(6117649..6117804) 1 NC_005027.1 hypothetical protein 6117804 1795914 RB11283 Rhodopirellula baltica SH 1 hypothetical protein NP_869886.1 6117649 R 243090 CDS NP_869887.1 32476893 1793237 6117762..6117917 1 NC_005027.1 hypothetical protein 6117917 1793237 RB11284 Rhodopirellula baltica SH 1 hypothetical protein NP_869887.1 6117762 D 243090 CDS NP_869888.1 32476894 1795660 6117961..6118356 1 NC_005027.1 PMID: 11097914 best DB hits: BLAST: pir:G69987; hypothetical protein ytaB - Bacillus subtilis -----; E=3e-08 gb:AAF01195.1; AF179401_4 (AF179401) TspO [Sinorhizobium meliloti]; E=2e-07 pir:A57438; tryptophan-rich sensory protein [similarity] -; E=4e-04 PFAM: PF01061; ABC-2 type transporter; E=0.09; TspO/MBR family protein 6118356 tspO 1795660 tspO Rhodopirellula baltica SH 1 TspO/MBR family protein NP_869888.1 6117961 D 243090 CDS NP_869889.1 32476895 1795508 6118405..6118632 1 NC_005027.1 hypothetical protein 6118632 1795508 RB11287 Rhodopirellula baltica SH 1 hypothetical protein NP_869889.1 6118405 D 243090 CDS NP_869890.1 32476896 1795925 6118710..6119525 1 NC_005027.1 PMID: 11466286 best DB hits: BLAST: pir:F75526; hypothetical protein - Deinococcus radiodurans (strain; E=0.012; hypothetical protein 6119525 1795925 RB11288 Rhodopirellula baltica SH 1 hypothetical protein NP_869890.1 6118710 D 243090 CDS NP_869891.1 32476897 1795575 6119539..6120036 1 NC_005027.1 hypothetical protein 6120036 1795575 RB11289 Rhodopirellula baltica SH 1 hypothetical protein NP_869891.1 6119539 D 243090 CDS NP_869892.1 32476898 1791961 6120208..6120648 1 NC_005027.1 best DB hits: BLAST: embl:CAB92104.1; (AL356334) hypothetical protein SCD69.03; E=0.001 pir:D70567; hypothetical protein Rv3471c - Mycobacterium; E=0.006 pir:A64502; hypothetical protein MJ1618 - Methanococcus jannaschii; E=0.052 COG: Rv3471c; COG0662 Mannose-6-phosphate isomerase; E=6e-04; mannose-6-phosphate isomerase 6120648 1791961 RB11291 Rhodopirellula baltica SH 1 mannose-6-phosphate isomerase NP_869892.1 6120208 D 243090 CDS NP_869893.1 32476899 1794323 complement(6120684..6120881) 1 NC_005027.1 hypothetical protein 6120881 1794323 RB11292 Rhodopirellula baltica SH 1 hypothetical protein NP_869893.1 6120684 R 243090 CDS NP_869894.1 32476900 1794866 complement(6120889..6121182) 1 NC_005027.1 hypothetical protein 6121182 1794866 RB11293 Rhodopirellula baltica SH 1 hypothetical protein NP_869894.1 6120889 R 243090 CDS NP_869895.1 32476901 1796965 6121139..6124990 1 NC_005027.1 PMID: 9282737 PMID: 1971619 best DB hits: BLAST: pir:C75333; general secretion pathway protein E - Deinococcus; E=2e-04 pir:A72329; general secretion pathway protein E - Thermotoga; E=0.002 swissprot:P31599; NFRB_ECOLI BACTERIOPHAGE N4 ADSORPTION PROTEIN B; E=0.014 COG: DR1964; COG2804 Predicted ATPases involved in pili biogenesis, PilB; E=2e-05; general secretion pathway protein E 6124990 1796965 RB11294 Rhodopirellula baltica SH 1 general secretion pathway protein E NP_869895.1 6121139 D 243090 CDS NP_869896.1 32476902 1794657 complement(6124961..6125170) 1 NC_005027.1 hypothetical protein 6125170 1794657 RB11296 Rhodopirellula baltica SH 1 hypothetical protein NP_869896.1 6124961 R 243090 CDS NP_869897.1 32476903 1793012 6125177..6125308 1 NC_005027.1 hypothetical protein 6125308 1793012 RB11298 Rhodopirellula baltica SH 1 hypothetical protein NP_869897.1 6125177 D 243090 CDS NP_869898.1 32476904 1793162 complement(6125286..6125429) 1 NC_005027.1 hypothetical protein 6125429 1793162 RB11299 Rhodopirellula baltica SH 1 hypothetical protein NP_869898.1 6125286 R 243090 CDS NP_869899.1 32476905 1793098 complement(6125444..6125599) 1 NC_005027.1 hypothetical protein 6125599 1793098 RB11300 Rhodopirellula baltica SH 1 hypothetical protein NP_869899.1 6125444 R 243090 CDS NP_869900.1 32476906 1794207 6125647..6127269 1 NC_005027.1 signal peptide 6127269 1794207 RB11301 Rhodopirellula baltica SH 1 signal peptide NP_869900.1 6125647 D 243090 CDS NP_869901.1 32476907 1792622 complement(6127205..6128599) 1 NC_005027.1 best DB hits: BLAST: gb:AAG18661.1; (AE004971) Vng0021h [Halobacterium sp. NRC-1]; E=4e-23 gb:AAG18694.1; (AE004974) Vng0056h [Halobacterium sp. NRC-1]; E=4e-21 pir:T44318; transposase homolog [imported] - Vibrio cholerae -----; E=3e-16; transposase-like protein 6128599 1792622 RB11303 Rhodopirellula baltica SH 1 transposase-like protein NP_869901.1 6127205 R 243090 CDS NP_869902.1 32476908 1792268 6128704..6129624 1 NC_005027.1 best DB hits: PFAM: PF02424; ApbE family; E=0.71; signal peptide 6129624 1792268 RB11305 Rhodopirellula baltica SH 1 signal peptide NP_869902.1 6128704 D 243090 CDS NP_869903.1 32476909 1793931 6129599..6129709 1 NC_005027.1 hypothetical protein 6129709 1793931 RB11307 Rhodopirellula baltica SH 1 hypothetical protein NP_869903.1 6129599 D 243090 CDS NP_869904.1 32476910 1793154 complement(6129721..6129960) 1 NC_005027.1 hypothetical protein 6129960 1793154 RB11308 Rhodopirellula baltica SH 1 hypothetical protein NP_869904.1 6129721 R 243090 CDS NP_869905.1 32476911 1792829 6130032..6130220 1 NC_005027.1 hypothetical protein 6130220 1792829 RB11309 Rhodopirellula baltica SH 1 hypothetical protein NP_869905.1 6130032 D 243090 CDS NP_869906.1 32476912 1794966 6130268..6130516 1 NC_005027.1 hypothetical protein 6130516 1794966 RB11310 Rhodopirellula baltica SH 1 hypothetical protein NP_869906.1 6130268 D 243090 CDS NP_869907.1 32476913 1792250 6130297..6130482 1 NC_005027.1 hypothetical protein 6130482 1792250 RB11311 Rhodopirellula baltica SH 1 hypothetical protein NP_869907.1 6130297 D 243090 CDS NP_869908.1 32476914 1790359 6130479..6131645 1 NC_005027.1 hypothetical protein 6131645 1790359 RB11312 Rhodopirellula baltica SH 1 hypothetical protein NP_869908.1 6130479 D 243090 CDS NP_869909.1 32476915 1794848 complement(6131652..6132548) 1 NC_005027.1 PMID: 8076591 best DB hits: BLAST: embl:CAB54047.1; (AJ245436) hypothetical protein, 21.8 kD; E=4e-27 swissprot:P50361; Y4HQ_RHISN HYPOTHETICAL 21.7 KD PROTEIN Y4HQ; E=5e-25 pir:S19103; hypothetical protein 3 - Agrobacterium rhizogenes; E=1e-19 COG: BS_lexA; COG1974 SOS-response transcriptional repressors; E=5e-06 PFAM: PF00325; Bacterial regulatory proteins,; E=4.2e-05 PF01325; Iron dependent repressor, N-te; E=0.00013 PF01047; MarR family; E=0.00032; lexA repressor 6132548 lexA 1794848 lexA Rhodopirellula baltica SH 1 lexA repressor NP_869909.1 6131652 R 243090 CDS NP_869910.1 32476916 1793282 complement(6132840..6133748) 1 NC_005027.1 hypothetical protein 6133748 1793282 RB11314 Rhodopirellula baltica SH 1 hypothetical protein NP_869910.1 6132840 R 243090 CDS NP_869911.1 32476917 1790718 6133854..6134246 1 NC_005027.1 hypothetical protein 6134246 1790718 RB11316 Rhodopirellula baltica SH 1 hypothetical protein NP_869911.1 6133854 D 243090 CDS NP_869912.1 32476918 1790061 complement(6134344..6134589) 1 NC_005027.1 hypothetical protein 6134589 1790061 RB11318 Rhodopirellula baltica SH 1 hypothetical protein NP_869912.1 6134344 R 243090 CDS NP_869913.1 32476919 1793615 complement(6134657..6136312) 1 NC_005027.1 best DB hits: BLAST: gb:AAC53043.1; (U86137) telomerase-1 [Mus musculus]; E=2e-08 gb:AAB51690.1; (U89282) telomerase component 1 [Rattus; E=3e-06 gb:AAC51107.1; (U86136) telomerase-associated protein TP-1 [Homo; E=6e-06; telomerase-1 6136312 1793615 RB11319 Rhodopirellula baltica SH 1 telomerase-1 NP_869913.1 6134657 R 243090 CDS NP_869914.1 32476920 1791342 complement(6136339..6138507) 1 NC_005027.1 hypothetical protein 6138507 1791342 RB11320 Rhodopirellula baltica SH 1 hypothetical protein NP_869914.1 6136339 R 243090 CDS NP_869915.1 32476921 1792909 complement(6138517..6141957) 1 NC_005027.1 PMID: 10517581 best DB hits: BLAST: ddbj:BAA83790.1; (AB025225) AfsR-g [Streptomyces griseus]; E=2e-05 embl:CAB72409.1; (AL138978) AfsR-like regulator; E=9e-04 swissprot:P25941; AFSR_STRCO REGULATORY PROTEIN AFSR -----; E=0.003 PFAM: PF00293; MutT-like domain; E=2.9e-06 PF00515; TPR Domain; E=0.28; regulatory protein afsR 6141957 afsR-g 1792909 afsR-g Rhodopirellula baltica SH 1 regulatory protein afsR NP_869915.1 6138517 R 243090 CDS NP_869916.1 32476922 1790487 complement(6142000..6142431) 1 NC_005027.1 hypothetical protein 6142431 1790487 RB11323 Rhodopirellula baltica SH 1 hypothetical protein NP_869916.1 6142000 R 243090 CDS NP_869917.1 32476923 1795476 complement(6142392..6142535) 1 NC_005027.1 hypothetical protein 6142535 1795476 RB11325 Rhodopirellula baltica SH 1 hypothetical protein NP_869917.1 6142392 R 243090 CDS NP_869918.1 32476924 1795560 6142717..6143733 1 NC_005027.1 PMID: 10588699 PMID: 9556617 best DB hits: BLAST: swissprot:P05827; ILVY_ECOLI TRANSCRIPTIONAL ACTIVATOR PROTEIN; E=1e-05 pir:S30671; ilvC activator - Escherichia coli; E=1e-05 gb:AAG58968.1; AE005608_9 (AE005608) positive regulator for ilvC; E=1e-05 COG: ilvY; COG0583 Transcriptional regulator; E=9e-07 PFAM: PF00126; Bacterial regulatory helix-turn-heli; E=6.1e-15; transcriptional activator protein ilvY 6143733 iuvY 1795560 iuvY Rhodopirellula baltica SH 1 transcriptional activator protein ilvY NP_869918.1 6142717 D 243090 CDS NP_869919.1 32476925 1790121 6143730..6144254 1 NC_005027.1 hypothetical protein 6144254 1790121 RB11329 Rhodopirellula baltica SH 1 hypothetical protein NP_869919.1 6143730 D 243090 CDS NP_869920.1 32476926 1792285 6144227..6146656 1 NC_005027.1 PMID: 2046548 PMID: 8412700 best DB hits: BLAST: pir:T35377; probable membrane protein - Streptomyces coelicolor; E=4e-08 pir:S76244; hypothetical protein - Synechocystis sp. (strain PCC; E=6e-06 pir:S76018; hypothetical protein - Synechocystis sp. (strain PCC; E=3e-04 COG: sll0261; COG1226 Kef-type K+ transport systems, predicted; E=6e-07 DR2336; COG1226 Kef-type K+ transport systems, predicted NAD-binding; E=4e-04 MJ0138.1; COG1226 Kef-type K+ transport systems, predicted; E=7e-04 PFAM: PF01408; Oxidoreductase, NAD-bind; E=0.0037 PF02254; KTN NAD-binding domain; E=3.8e-13; glutathione-regulated potassium-efflux system protein KefB 6146656 1792285 RB11331 Rhodopirellula baltica SH 1 glutathione-regulated potassium-efflux system protein KefB NP_869920.1 6144227 D 243090 CDS NP_869921.1 32476927 1796844 6146708..6152407 1 NC_005027.1 PMID: 3291115 best DB hits: BLAST: gb:AAF73695.1; (AE002226) serinethreonine-protein kinase; E=1e-35 pir:G71532; probable threoninetyrosine-specific protein kinase (EC; E=8e-34 pir:C72120; st protein kinase - Chlamydophila pneumoniae (strain; E=5e-33 COG: CT301_1; COG0515 Serine/threonine protein kinases; E=8e-35 PFAM: PF00069; Protein kinase domain; E=2.6e-37 PF00400; WD domain, G-beta repeat; E=0.013 PF00515; TPR Domain; E=0.0067; serine/threonine-protein kinase 6152407 1796844 RB11334 Rhodopirellula baltica SH 1 serine/threonine-protein kinase NP_869921.1 6146708 D 243090 CDS NP_869922.1 32476928 1791775 6152404..6152517 1 NC_005027.1 hypothetical protein 6152517 1791775 RB11336 Rhodopirellula baltica SH 1 hypothetical protein NP_869922.1 6152404 D 243090 CDS NP_869923.1 32476929 1794212 6152514..6153383 1 NC_005027.1 PMID: 8041625 best DB hits: BLAST: pir:S35005; probable transposase - Acetobacter xylinus insertion; E=9e-21 pir:S35004; probable transposase - Acetobacter xylinus insertion; E=4e-20 gb:AAD47597.1; AF144038_1 (AF144038) transposase; E=2e-18 COG: sll1716; COG3293 Predicted transposase; E=2e-13 PFAM: PF01511; Transposase; E=1.2e-09 PF01675; Transposase; E=2.5e-05; transposase 6153383 1794212 RB11337 Rhodopirellula baltica SH 1 transposase NP_869923.1 6152514 D 243090 CDS NP_869924.1 32476930 1791100 complement(6153422..6153820) 1 NC_005027.1 hypothetical protein 6153820 1791100 RB11339 Rhodopirellula baltica SH 1 hypothetical protein NP_869924.1 6153422 R 243090 CDS NP_869925.1 32476931 1792460 6153930..6154139 1 NC_005027.1 hypothetical protein 6154139 1792460 RB11340 Rhodopirellula baltica SH 1 hypothetical protein NP_869925.1 6153930 D 243090 CDS NP_869926.1 32476932 1792934 complement(6154153..6154359) 1 NC_005027.1 hypothetical protein 6154359 1792934 RB11341 Rhodopirellula baltica SH 1 hypothetical protein NP_869926.1 6154153 R 243090 CDS NP_869927.1 32476933 1794680 complement(6154311..6154655) 1 NC_005027.1 hypothetical protein 6154655 1794680 RB11342 Rhodopirellula baltica SH 1 hypothetical protein NP_869927.1 6154311 R 243090 CDS NP_869928.1 32476934 1794425 6154696..6154977 1 NC_005027.1 hypothetical protein 6154977 1794425 RB11343 Rhodopirellula baltica SH 1 hypothetical protein NP_869928.1 6154696 D 243090 CDS NP_869929.1 32476935 1790643 complement(6155013..6155240) 1 NC_005027.1 hypothetical protein 6155240 1790643 RB11345 Rhodopirellula baltica SH 1 hypothetical protein NP_869929.1 6155013 R 243090 CDS NP_869930.1 32476936 1796820 complement(6155237..6155692) 1 NC_005027.1 hypothetical protein 6155692 1796820 RB11348 Rhodopirellula baltica SH 1 hypothetical protein NP_869930.1 6155237 R 243090 CDS NP_869931.1 32476937 1792741 complement(6155689..6156546) 1 NC_005027.1 best DB hits: BLAST: pir:A81289; hypothetical protein Cj1433c [imported] - Campylobacter; E=6e-07 pir:E71020; hypothetical protein PH1458 - Pyrococcus horikoshii; E=0.017 gb:AAD45550.1; U70376_15 (U70376) SpcY [Streptomyces netropsis]; E=0.061 COG: PH1458; COG1964 Predicted Fe-S oxidoreductases; E=0.002; hypothetical protein 6156546 1792741 RB11352 Rhodopirellula baltica SH 1 hypothetical protein NP_869931.1 6155689 R 243090 CDS NP_869932.1 32476938 1792669 complement(6156470..6157495) 1 NC_005027.1 hypothetical protein 6157495 1792669 RB11354 Rhodopirellula baltica SH 1 hypothetical protein NP_869932.1 6156470 R 243090 CDS NP_869933.1 32476939 1793008 complement(6157486..6158199) 1 NC_005027.1 PMID: 7515051 best DB hits: BLAST: gb:AAA39802.1; (L30104) N-acetylgalactosaminyltransferase [Mus; E=2e-06 PFAM: PF00535; Glycosyl transferase; E=1.6e-06; N-acetylgalactosaminyltransferase 6158199 1793008 RB11356 Rhodopirellula baltica SH 1 N-acetylgalactosaminyltransferase NP_869933.1 6157486 R 243090 CDS NP_869934.1 32476940 1790527 complement(6158192..6158557) 1 NC_005027.1 hypothetical protein 6158557 1790527 RB11360 Rhodopirellula baltica SH 1 hypothetical protein NP_869934.1 6158192 R 243090 CDS NP_869935.1 32476941 1792058 complement(6158661..6159398) 1 NC_005027.1 hypothetical protein 6159398 1792058 RB11363 Rhodopirellula baltica SH 1 hypothetical protein NP_869935.1 6158661 R 243090 CDS NP_869936.1 32476942 1790621 complement(6159395..6159943) 1 NC_005027.1 PMID: 3119860 best DB hits: BLAST: pir:F70829; probable transcriptional regulator Rv0474 - Mycobacterium; E=0.015 embl:CAC04034.1; (AL391406) DNA-binding protein; E=0.10 pir:S25724; hypothetical protein 1 (phbC 5' region) - Rhodococcus; E=0.12 COG: Rv0474; COG1396 Predicted transcriptional regulators; E=0.001 PFAM: PF01381; Helix-turn-helix; E=2.9e-13; transcriptional regulator 6159943 1790621 RB11366 Rhodopirellula baltica SH 1 transcriptional regulator NP_869936.1 6159395 R 243090 CDS NP_869937.1 32476943 1791143 complement(6160080..6163904) 1 NC_005027.1 best DB hits: PFAM: PF00515; TPR Domain; E=0.017; hypothetical protein 6163904 1791143 RB11367 Rhodopirellula baltica SH 1 hypothetical protein NP_869937.1 6160080 R 243090 CDS NP_869938.1 32476944 1790799 complement(6163939..6164295) 1 NC_005027.1 best DB hits: BLAST: embl:CAC04034.1; (AL391406) DNA-binding protein; E=0.048 pir:S25724; hypothetical protein 1 (phbC 5' region) - Rhodococcus; E=0.048 ddbj:BAB07268.1; (AP001519) immunity repressor protein; E=0.057 COG: BH3549; COG1396 Predicted transcriptional regulators; E=0.006 PFAM: PF01381; Helix-turn-helix; E=3.5e-10; hypothetical protein 6164295 1790799 RB11370 Rhodopirellula baltica SH 1 hypothetical protein NP_869938.1 6163939 R 243090 CDS NP_869939.1 32476945 1795251 complement(6164292..6167747) 1 NC_005027.1 PMID: 8921897 best DB hits: BLAST: gb:AAK03625.1; (AE006191) HsdR [Pasteurella multocida]; E=9e-56 pir:C81302; probable type I site-specific deoxyribonuclease (EC; E=1e-54 pir:JC5216; type I site-specific deoxyribonuclease (EC 3.1.21.3) Hsd; E=1e-52 COG: Cj1549c; COG0610 Restriction enzymes type I helicase subunits and; E=1e-55 PFAM: PF01911; Ribosomal LX protein; E=0.84; hypothetical protein 6167747 hsdR 1795251 hsdR Rhodopirellula baltica SH 1 hypothetical protein NP_869939.1 6164292 R 243090 CDS NP_869940.1 32476946 1792734 complement(6167856..6168689) 1 NC_005027.1 hypothetical protein 6168689 1792734 RB11373 Rhodopirellula baltica SH 1 hypothetical protein NP_869940.1 6167856 R 243090 CDS NP_869941.1 32476947 1796795 complement(6168686..6169522) 1 NC_005027.1 best DB hits: BLAST: gb:AAB91575.2; (AF242881) yma [Agrobacterium tumefaciens]; E=2e-32; hypothetical protein 6169522 yma 1796795 yma Rhodopirellula baltica SH 1 hypothetical protein NP_869941.1 6168686 R 243090 CDS NP_869942.1 32476948 1795616 complement(6169519..6170754) 1 NC_005027.1 PMID: 2585490 PMID: 9837717 best DB hits: BLAST: gb:AAC37110.1; (L77118) M. jannaschii predicted coding region; E=3e-12 swissprot:Q58615; YC18_METJA HYPOTHETICAL PROTEIN MJ1218 -----; E=3e-12 embl:CAA35604.1; (X17591) HsdS polypeptide, part of CfrA family; E=1e-06 COG: MJECL41; COG0732 Restriction endonuclease S subunits; E=3e-13 PFAM: PF01420; Type I restriction modification; E=0.00019; polypeptide HsdS 6170754 hsdS 1795616 hsdS Rhodopirellula baltica SH 1 polypeptide HsdS NP_869942.1 6169519 R 243090 CDS NP_869943.1 32476949 1793856 complement(6170751..6172913) 1 NC_005027.1 PMID: 8921897 best DB hits: BLAST: pir:D82522; type I restriction-modification system DNA methylase; E=4e-58 gb:AAC37111.1; (L77118) type I restriction enyzme ECOR1243 I M; E=4e-56 embl:CAA68057.1; (X99719) Sty SBLI [Salmonella enterica]; E=1e-54 COG: XF2742; COG0286 Type I restriction-modification system; E=4e-59 PFAM: PF02506; Type I restriction modification s; E=1e-34 PF02384; N-6 DNA Methylase; E=4.3e-10; type I restriction-modification system DNA methylase 6172913 1793856 RB11379 Rhodopirellula baltica SH 1 type I restriction-modification system DNA methylase NP_869943.1 6170751 R 243090 CDS NP_869944.1 32476950 1792953 6173105..6174142 1 NC_005027.1 hypothetical protein 6174142 1792953 RB11381 Rhodopirellula baltica SH 1 hypothetical protein NP_869944.1 6173105 D 243090 CDS NP_869945.1 32476951 1794190 6174244..6175965 1 NC_005027.1 best DB hits: PFAM: PF00140; Sigma-70 factor; E=0.0029; hypothetical protein 6175965 1794190 RB11383 Rhodopirellula baltica SH 1 hypothetical protein NP_869945.1 6174244 D 243090 CDS NP_869946.1 32476952 1793466 complement(6175940..6176116) 1 NC_005027.1 hypothetical protein 6176116 1793466 RB11386 Rhodopirellula baltica SH 1 hypothetical protein NP_869946.1 6175940 R 243090 CDS NP_869947.1 32476953 1791933 6176099..6176473 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:D75324; hypothetical protein - Deinococcus radiodurans (strain; E=6e-15 pir:C83546; hypothetical protein PA0806 [imported] - Pseudomonas; E=2e-11 embl:CAB92195.1; (AL356592) membrane protein.; E=0.005; hypothetical protein 6176473 1791933 RB11387 Rhodopirellula baltica SH 1 hypothetical protein NP_869947.1 6176099 D 243090 CDS NP_869948.1 32476954 1793571 6176533..6176658 1 NC_005027.1 hypothetical protein 6176658 1793571 RB11388 Rhodopirellula baltica SH 1 hypothetical protein NP_869948.1 6176533 D 243090 CDS NP_869949.1 32476955 1794084 complement(6176641..6176823) 1 NC_005027.1 hypothetical protein 6176823 1794084 RB11389 Rhodopirellula baltica SH 1 hypothetical protein NP_869949.1 6176641 R 243090 CDS NP_869950.1 32476956 1790937 6176780..6176995 1 NC_005027.1 hypothetical protein 6176995 1790937 RB11390 Rhodopirellula baltica SH 1 hypothetical protein NP_869950.1 6176780 D 243090 CDS NP_869951.1 32476957 1796788 6177102..6177239 1 NC_005027.1 hypothetical protein 6177239 1796788 RB11391 Rhodopirellula baltica SH 1 hypothetical protein NP_869951.1 6177102 D 243090 CDS NP_869952.1 32476958 1795634 6177208..6177654 1 NC_005027.1 hypothetical protein 6177654 1795634 RB11392 Rhodopirellula baltica SH 1 hypothetical protein NP_869952.1 6177208 D 243090 CDS NP_869953.1 32476959 1795689 6177651..6177926 1 NC_005027.1 hypothetical protein 6177926 1795689 RB11393 Rhodopirellula baltica SH 1 hypothetical protein NP_869953.1 6177651 D 243090 CDS NP_869954.1 32476960 1790275 6178039..6178434 1 NC_005027.1 PMID: 9384377 best DB hits: BLAST: pir:G69987; hypothetical protein ytaB - Bacillus subtilis -----; E=2e-08 gb:AAF01195.1; AF179401_4 (AF179401) TspO [Sinorhizobium meliloti]; E=8e-08 pir:A57438; tryptophan-rich sensory protein [similarity] -; E=9e-05 PFAM: PF01061; ABC-2 type transporter; E=0.13; hypothetical protein 6178434 1790275 RB11395 Rhodopirellula baltica SH 1 hypothetical protein NP_869954.1 6178039 D 243090 CDS NP_869955.1 32476961 1793953 6178445..6178555 1 NC_005027.1 hypothetical protein 6178555 1793953 RB11396 Rhodopirellula baltica SH 1 hypothetical protein NP_869955.1 6178445 D 243090 CDS NP_869956.1 32476962 1793682 6178540..6179163 1 NC_005027.1 PMID: 9371463 best DB hits: BLAST: pir:B69020; hypothetical protein MTH115 - Methanobacterium; E=2e-17 gb:AAD32774.1; AC007661_11 (AC007661) unknown protein [Arabidopsis; E=4e-09 ddbj:BAA96146.1; (AP002092) ESTs; E=3e-07; hypothetical protein 6179163 1793682 RB11397 Rhodopirellula baltica SH 1 hypothetical protein NP_869956.1 6178540 D 243090 CDS NP_869957.1 32476963 1792265 6179167..6179565 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S75732; hypothetical protein slr0919 - Synechocystis sp. (strain; E=1e-14 ddbj:BAB10296.1; (AB026650) gene_id:MPF21.11~pir S75732~similar; E=3e-13 pir:H82154; conserved hypothetical protein VC1812 [imported] -; E=6e-07 COG: slr0919; COG3011 Uncharacterized BCR; E=1e-15; hypothetical protein 6179565 1792265 RB11399 Rhodopirellula baltica SH 1 hypothetical protein NP_869957.1 6179167 D 243090 CDS NP_869958.1 32476964 1791440 complement(6179585..6182800) 1 NC_005027.1 PMID: 97000351 best DB hits: BLAST: embl:CAB65593.1; (AL136058) helicase [Streptomyces; E=0.0 pir:H82276; helicase-related protein VC0812 [imported] - Vibrio; E=1e-64 gb:AAB64767.1; (U32517) Ydr332wp [Saccharomyces cerevisiae]; E=4e-21 COG: VC0812_2; COG1061 DNA or RNA helicases of superfamily II; E=1e-57 hsdR; COG0610 Restriction enzymes type I helicase subunits and; E=9e-06 PH0210; COG1061 DNA or RNA helicases of superfamily II; E=7e-05 PFAM: PF00270; DEAD/DEAH box helicase; E=0.00054 PF00271; Helicase conserved C-terminal doma; E=7.7e-14; helicase 6182800 1791440 RB11401 Rhodopirellula baltica SH 1 helicase NP_869958.1 6179585 R 243090 CDS NP_869959.1 32476965 1791587 complement(6182791..6183744) 1 NC_005027.1 best DB hits: PFAM: PF01549; Domain of unknown function DUF18; E=0.1; hypothetical protein 6183744 1791587 RB11403 Rhodopirellula baltica SH 1 hypothetical protein NP_869959.1 6182791 R 243090 CDS NP_869960.1 32476966 1791797 complement(6183795..6184535) 1 NC_005027.1 best DB hits: BLAST: embl:CAA07132.1; (AJ006589) gp7 [Bacteriophage phi-C31]; E=0.66; hypothetical protein 6184535 1791797 RB11405 Rhodopirellula baltica SH 1 hypothetical protein NP_869960.1 6183795 R 243090 CDS NP_869961.1 32476967 1795152 6184457..6186298 1 NC_005027.1 PMID: 8412658 best DB hits: BLAST: swissprot:Q07736; T1RA_ECOLI TYPE I RESTRICTION ENZYME ECOAI R; E=3e-33 gb:AAG59531.1; AE005666_3 (AE005666) restriction; E=3e-33 swissprot:P08956; T1RK_ECOLI TYPE I RESTRICTION ENZYME ECOKI R; E=4e-29 COG: hsdR; COG0610 Restriction enzymes type I helicase subunits and; E=4e-30 YDR332w; COG1061 DNA or RNA helicases of superfamily II; E=2e-09 MJECL40; COG0610 Restriction enzymes type I helicase subunits and; E=0.001 PFAM: PF00270; DEAD/DEAH box helicase; E=0.14 PF00271; Helicase conserved C-terminal doma; E=0.6; type I restriction enzyme EcoAI R protein 6186298 hsdR 1795152 hsdR Rhodopirellula baltica SH 1 type I restriction enzyme EcoAI R protein NP_869961.1 6184457 D 243090 CDS NP_869962.1 32476968 1792337 6186295..6186735 1 NC_005027.1 hypothetical protein 6186735 1792337 RB11408 Rhodopirellula baltica SH 1 hypothetical protein NP_869962.1 6186295 D 243090 CDS NP_869963.1 32476969 1794401 6186739..6187794 1 NC_005027.1 PMID: 8412658 best DB hits: BLAST: swissprot:Q47282; T1ME_ECOLI TYPE I RESTRICTION ENZYME ECOEI M; E=4e-13 gb:AAG59530.1; AE005666_2 (AE005666) restriction; E=1e-12 pir:A47200; EcoA system protein M - Escherichia coli ----- gb:; E=2e-12 COG: Rv2756c; COG0286 Type I restriction-modification system; E=4e-10 PFAM: PF02506; Type I restriction modification s; E=3.3e-06; type I restriction enzyme M protein 6187794 hsdM 1794401 hsdM Rhodopirellula baltica SH 1 type I restriction enzyme M protein NP_869963.1 6186739 D 243090 CDS NP_869964.1 32476970 1792717 6187922..6189079 1 NC_005027.1 PMID: 6304321 best DB hits: BLAST: embl:CAA10700.1; (AJ132566) HsdS protein [Escherichia coli]; E=5e-13 swissprot:P06990; T1SB_ECOLI TYPE I RESTRICTION ENZYME ECOBI; E=2e-10 gb:AAG18734.1; (AE004978) type I restriction modification enzyme,; E=4e-09 COG: VNG0107G; COG0732 Restriction endonuclease S subunits; E=4e-10 PFAM: PF01420; Type I restriction modification D; E=3.3e-06; Type I restriction enzyme EcoBI specificity protein 6189079 hsdS 1792717 hsdS Rhodopirellula baltica SH 1 Type I restriction enzyme EcoBI specificity protein NP_869964.1 6187922 D 243090 CDS NP_869965.1 32476971 1793659 6189076..6190896 1 NC_005027.1 PMID: 4515613 PMID: 354508 PMID: 6221115 best DB hits: BLAST: gb:AAA96561.1; (J02459) ea59 (525) [bacteriophage lambda]; E=5e-05 pir:S49559; phage Hau3 resistance protein - Streptomyces lividans; E=2e-04 gb:AAK02366.1; (AE006063) unknown [Pasteurella multocida]; E=0.014 PFAM: PF02463; SMC domain N terminal domain; E=0.039; hypothetical protein 6190896 1793659 RB11415 Rhodopirellula baltica SH 1 hypothetical protein NP_869965.1 6189076 D 243090 CDS NP_869966.1 32476972 1791168 6190901..6191992 1 NC_005027.1 PMID: 12003951 best DB hits: BLAST: gb:AAK02367.1; (AE006063) unknown [Pasteurella multocida]; E=0.049 gb:AAA96560.1; (J02459) ea31 (296) [bacteriophage lambda]; E=0.19; hypothetical protein 6191992 1791168 RB11416 Rhodopirellula baltica SH 1 hypothetical protein NP_869966.1 6190901 D 243090 CDS NP_869967.1 32476973 1796814 complement(6192077..6192388) 1 NC_005027.1 PMID: 7929436 best DB hits: BLAST: swissprot:P51486; ARR1_CALVI PHOSRESTIN II (ARRESTIN A) (ARRESTIN; E=0.15 swissprot:P15372; ARRA_DROME PHOSRESTIN II (ARRESTIN A) (ARRESTIN; E=0.89; phosrestin 6192388 arr1 1796814 arr1 Rhodopirellula baltica SH 1 phosrestin NP_869967.1 6192077 R 243090 CDS NP_869968.1 32476974 1790763 complement(6192385..6192909) 1 NC_005027.1 PMID: 20365717 best DB hits: BLAST: pir:E75309; conserved hypothetical protein - Deinococcus radiodurans; E=2e-34 pir:T35251; probable endonuclease - Streptomyces coelicolor -----; E=3e-04 pir:A82625; endonuclease V (deoxyinosine 3'endonuclease) XF1892; E=0.005 COG: DR2162; COG1515 Deoxyinosine 3'endonuclease (endonuclease V); E=2e-35; endonuclease V 6192909 nfi 1790763 nfi Rhodopirellula baltica SH 1 endonuclease V NP_869968.1 6192385 R 243090 CDS NP_869969.1 32476975 1790071 complement(6192938..6193786) 1 NC_005027.1 hypothetical protein 6193786 1790071 RB11420 Rhodopirellula baltica SH 1 hypothetical protein NP_869969.1 6192938 R 243090 CDS NP_869970.1 32476976 1793464 complement(6193880..6195538) 1 NC_005027.1 PMID: 10567266 PMID: 10766734 best DB hits: BLAST: swissprot:Q9RUW8; RO60_DEIRA 60-KDA SS-ARO RIBONUCLEOPROTEIN; E=2e-17 gb:AAC53142.1; (U66843) Mus musculus 60kDa SS-ARo; E=1e-11 pir:T36919; hypothetical protein SCI7.23c - Streptomyces coelicolor; E=1e-11; 60-kDa SS-A/Ro ribonucleoprotein 6195538 rsr 1793464 rsr Rhodopirellula baltica SH 1 60-kDa SS-A/Ro ribonucleoprotein NP_869970.1 6193880 R 243090 CDS NP_869971.1 32476977 1792593 6195656..6196132 1 NC_005027.1 hypothetical protein 6196132 1792593 RB11424 Rhodopirellula baltica SH 1 hypothetical protein NP_869971.1 6195656 D 243090 CDS NP_869972.1 32476978 1795192 6196136..6196417 1 NC_005027.1 hypothetical protein 6196417 1795192 RB11427 Rhodopirellula baltica SH 1 hypothetical protein NP_869972.1 6196136 D 243090 CDS NP_869973.1 32476979 1792583 6196478..6196591 1 NC_005027.1 hypothetical protein 6196591 1792583 RB11429 Rhodopirellula baltica SH 1 hypothetical protein NP_869973.1 6196478 D 243090 CDS NP_869974.1 32476980 1793253 complement(6196640..6196948) 1 NC_005027.1 hypothetical protein 6196948 1793253 RB11431 Rhodopirellula baltica SH 1 hypothetical protein NP_869974.1 6196640 R 243090 CDS NP_869975.1 32476981 1792552 complement(6196988..6197188) 1 NC_005027.1 hypothetical protein 6197188 1792552 RB11432 Rhodopirellula baltica SH 1 hypothetical protein NP_869975.1 6196988 R 243090 CDS NP_869976.1 32476982 1792365 complement(6197233..6197442) 1 NC_005027.1 hypothetical protein 6197442 1792365 RB11434 Rhodopirellula baltica SH 1 hypothetical protein NP_869976.1 6197233 R 243090 CDS NP_869977.1 32476983 1794433 complement(6197429..6197707) 1 NC_005027.1 hypothetical protein 6197707 1794433 RB11436 Rhodopirellula baltica SH 1 hypothetical protein NP_869977.1 6197429 R 243090 CDS NP_869978.1 32476984 1794580 complement(6197762..6197926) 1 NC_005027.1 best DB hits: BLAST: swissprot:P06979; YECA_ECOLI HYPOTHETICAL 25.0 KD PROTEIN IN; E=5e-05 gb:AAG56897.1; AE005412_7 (AE005412) orf, hypothetical protein; E=5e-05 pir:G82437; SecA-related protein VCA0628 [imported] - Vibrio; E=1e-04 COG: yecA; COG3318 Predicted metal-binding protein related to the; E=4e-06 ychJ; COG3012 Uncharacterized BCR; E=4e-04 secA; COG0653 Preprotein translocase subunit SecA (ATPase, RNA; E=8e-04 PFAM: PF02810; SEC-C motif; E=2.2e-06; Zn-binding protein 6197926 1794580 RB11438 Rhodopirellula baltica SH 1 Zn-binding protein NP_869978.1 6197762 R 243090 CDS NP_869979.1 32476985 1794040 6197993..6198274 1 NC_005027.1 hypothetical protein 6198274 1794040 RB11439 Rhodopirellula baltica SH 1 hypothetical protein NP_869979.1 6197993 D 243090 CDS NP_869980.1 32476986 1790789 6199492..6199833 1 NC_005027.1 hypothetical protein 6199833 1790789 RB11446 Rhodopirellula baltica SH 1 hypothetical protein NP_869980.1 6199492 D 243090 CDS NP_869981.1 32476987 1792879 6200046..6200228 1 NC_005027.1 hypothetical protein 6200228 1792879 RB11450 Rhodopirellula baltica SH 1 hypothetical protein NP_869981.1 6200046 D 243090 CDS NP_869982.1 32476988 1793716 complement(6200405..6200599) 1 NC_005027.1 hypothetical protein 6200599 1793716 RB11452 Rhodopirellula baltica SH 1 hypothetical protein NP_869982.1 6200405 R 243090 CDS NP_869983.1 32476989 1792930 complement(6202404..6202862) 1 NC_005027.1 hypothetical protein 6202862 1792930 RB11461 Rhodopirellula baltica SH 1 hypothetical protein NP_869983.1 6202404 R 243090 CDS NP_869984.1 32476990 1795895 6202949..6203338 1 NC_005027.1 best DB hits: BLAST: pir:F75091; hypothetical protein PAB1624 - Pyrococcus abyssi (strain; E=1e-12 pir:F71051; hypothetical protein PH1109 - Pyrococcus horikoshii; E=7e-12 pir:H72254; conserved hypothetical protein - Thermotoga maritima; E=2e-11 COG: PAB1624; COG1832 Uncharacterized ACR; E=1e-13 AF0932; COG1042 Acyl-CoA synthetase (NDP forming); E=2e-11 yccU; COG1832 Uncharacterized ACR; E=3e-09 PFAM: PF02629; Uncharacterized ACR, COG1832; E=9.2e-17; hypothetical protein 6203338 1795895 RB11462 Rhodopirellula baltica SH 1 hypothetical protein NP_869984.1 6202949 D 243090 CDS NP_869985.1 32476991 1790394 complement(6203375..6204886) 1 NC_005027.1 best DB hits: PFAM: PF01011; PQQ enzyme repeat; E=0.39; hypothetical protein 6204886 1790394 RB11463 Rhodopirellula baltica SH 1 hypothetical protein NP_869985.1 6203375 R 243090 CDS NP_869986.1 32476992 1794584 complement(6204918..6205637) 1 NC_005027.1 hypothetical protein 6205637 1794584 RB11468 Rhodopirellula baltica SH 1 hypothetical protein NP_869986.1 6204918 R 243090 CDS NP_869987.1 32476993 1790134 6205661..6205771 1 NC_005027.1 hypothetical protein 6205771 1790134 RB11469 Rhodopirellula baltica SH 1 hypothetical protein NP_869987.1 6205661 D 243090 CDS NP_869988.1 32476994 1793590 complement(6205748..6207751) 1 NC_005027.1 best DB hits: BLAST: swissprot:O26373; Y273_METTH HYPOTHETICAL PROTEIN MTH273 -----; E=2e-10 swissprot:O67293; YC50_AQUAE HYPOTHETICAL PROTEIN AQ_1250 -----; E=3e-08 swissprot:O58984; YC69_PYRHO HYPOTHETICAL PROTEIN PH1269 -----; E=7e-06 COG: MTH273; COG1881 Phospholipid-binding protein; E=2e-11; phospholipid-binding protein 6207751 1793590 RB11470 Rhodopirellula baltica SH 1 phospholipid-binding protein NP_869988.1 6205748 R 243090 CDS NP_869989.1 32476995 1794674 complement(6207748..6208881) 1 NC_005027.1 best DB hits: BLAST: pir:T05344; hypothetical protein F8B4.40 - Arabidopsis thaliana; E=0.79; hypothetical protein 6208881 1794674 RB11471 Rhodopirellula baltica SH 1 hypothetical protein NP_869989.1 6207748 R 243090 CDS NP_869990.1 32476996 1794230 complement(6208842..6209513) 1 NC_005027.1 best DB hits: PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=2.9e-07; hypothetical protein 6209513 1794230 RB11473 Rhodopirellula baltica SH 1 hypothetical protein NP_869990.1 6208842 R 243090 CDS NP_869991.1 32476997 1791446 6209468..6209641 1 NC_005027.1 hypothetical protein 6209641 1791446 RB11475 Rhodopirellula baltica SH 1 hypothetical protein NP_869991.1 6209468 D 243090 CDS NP_869992.1 32476998 1795282 6209611..6210201 1 NC_005027.1 PMID: 7610040 best DB hits: BLAST: swissprot:P39368; YJHQ_ECOLI HYPOTHETICAL 20.0 KDA PROTEIN IN; E=6e-21 pir:B82297; probable acetyltransferase VC0655 [imported] - Vibrio; E=7e-13 gb:AAK04154.1; AE006244_3 (AE006244) HYPOTHETICAL PROTEIN; E=6e-10 COG: yjhQ; COG3153 Predicted acetyltransferase; E=6e-22 PFAM: PF00583; Acetyltransferase (GNAT) family; E=2.2e-10; acetyltransferase 6210201 1795282 RB11476 Rhodopirellula baltica SH 1 acetyltransferase NP_869992.1 6209611 D 243090 CDS NP_869993.1 32476999 1794384 6210389..6210799 1 NC_005027.1 hypothetical protein 6210799 1794384 RB11478 Rhodopirellula baltica SH 1 hypothetical protein NP_869993.1 6210389 D 243090 CDS NP_869994.1 32477000 1794432 6210741..6211241 1 NC_005027.1 PMID: 8521301 best DB hits: BLAST: pir:C82396; transcriptional regulator MarR family VCA0955 [imported] -; E=2e-04 gb:AAD05186.1; (AF110185) unknown [Burkholderia pseudomallei]; E=4e-04 pir:F82675; transcriptional regulator MarREmrR family XF1490; E=7e-04 COG: VCA0955; COG1846 Transcriptional regulators; E=2e-05 PFAM: PF01047; MarR family; E=7.4e-09; MarR family transcriptional regulator 6211241 1794432 RB11480 Rhodopirellula baltica SH 1 MarR family transcriptional regulator NP_869994.1 6210741 D 243090 CDS NP_869995.1 32477001 1791055 6211246..6212610 1 NC_005027.1 PMID: 92267380 PMID: 96067120 best DB hits: BLAST: pir:JC1118; alkyl sulfatase (EC 3.1.6.-) - Pseudomonas sp -----; E=1e-60 pir:G83552; probable beta-lactamase PA0740 [imported] - Pseudomonas; E=2e-47 embl:CAA99186.1; (Z74906) ORF YOL164w [Saccharomyces cerevisiae]; E=2e-42 COG: PA0740; COG2015 Alkyl sulfatase and related hydrolases; E=2e-48 aq_1798; COG0491 Zn-dependent hydrolases, including glyoxylases; E=4e-10 PFAM: PF00753; Metallo-beta-lactamase superfamil; E=2.1e-27 PF02151; UvrB/uvrC motif; E=0.2 PF01656; Cobyrinic acid a,c-diamide syntha; E=0.44; alkyl sulfatase or beta-lactamase 6212610 1791055 RB11482 Rhodopirellula baltica SH 1 alkyl sulfatase or beta-lactamase NP_869995.1 6211246 D 243090 CDS NP_869996.1 32477002 1795261 complement(6212611..6212742) 1 NC_005027.1 hypothetical protein 6212742 1795261 RB11484 Rhodopirellula baltica SH 1 hypothetical protein NP_869996.1 6212611 R 243090 CDS NP_869997.1 32477003 1791202 6212721..6213389 1 NC_005027.1 hypothetical protein 6213389 1791202 RB11485 Rhodopirellula baltica SH 1 hypothetical protein NP_869997.1 6212721 D 243090 CDS NP_869998.1 32477004 1796910 6213464..6213889 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:H83235; hypothetical protein PA3281 [imported] - Pseudomonas; E=0.002 gb:AAK02297.1; (AE006055) unknown [Pasteurella multocida]; E=0.005 pir:E83286; conserved hypothetical protein PA2864 [imported] -; E=0.062 COG: PA2864; COG2259 Predicted membrane protein; E=0.006; hypothetical protein 6213889 1796910 RB11487 Rhodopirellula baltica SH 1 hypothetical protein NP_869998.1 6213464 D 243090 CDS NP_869999.1 32477005 1794239 6213893..6214690 1 NC_005027.1 member of a large family of NAD or NADP-dependent oxidoreductases; paralogs occur in many bacteria; short chain dehydrogenase 6214690 1794239 RB11488 Rhodopirellula baltica SH 1 short chain dehydrogenase NP_869999.1 6213893 D 243090 CDS NP_870000.1 32477006 1794275 6214769..6215521 1 NC_005027.1 PMID: 8698519 PMID: 97000351 best DB hits: BLAST: embl:CAB59476.1; (AL132648) hypothetical protein SCI41.06; E=1e-31 swissprot:Q56743; VIUB_VIBVU VULNIBACTIN UTILIZATION PROTEIN VIUB; E=5e-31 swissprot:Q56646; VIUB_VIBCH VIBRIOBACTIN UTILIZATION PROTEIN VIUB; E=9e-30 COG: VC2210; COG2375 Siderophore-interacting protein; E=9e-31; vulnibactin utilization protein VIUB 6215521 1794275 RB11489 Rhodopirellula baltica SH 1 vulnibactin utilization protein VIUB NP_870000.1 6214769 D 243090 CDS NP_870001.1 32477007 1792674 6215558..6216103 1 NC_005027.1 PMID: 11248100 best DB hits: BLAST: gb:AAK04020.1; (AE006230) unknown [Pasteurella multocida]; E=0.010; transmembrane protein 6216103 1792674 RB11490 Rhodopirellula baltica SH 1 transmembrane protein NP_870001.1 6215558 D 243090 CDS NP_870002.1 32477008 1795473 6216103..6216390 1 NC_005027.1 hypothetical protein 6216390 1795473 RB11492 Rhodopirellula baltica SH 1 hypothetical protein NP_870002.1 6216103 D 243090 CDS NP_870003.1 32477009 1794316 complement(6216432..6216587) 1 NC_005027.1 hypothetical protein 6216587 1794316 RB11493 Rhodopirellula baltica SH 1 hypothetical protein NP_870003.1 6216432 R 243090 CDS NP_870004.1 32477010 1790174 6216550..6217431 1 NC_005027.1 PMID: 10086841 PMID: 10086842 PMID: 10192928 best DB hits: BLAST: ddbj:BAB04024.1; (AP001508) BH0305~unknown conserved protein in; E=4e-31 gb:AAG59409.1; AE005653_10 (AE005653) oxidoreductase; E=2e-23 swissprot:P39315; YTFG_ECOLI HYPOTHETICAL 29.7 KD PROTEIN IN; E=4e-23 COG: BH0305; COG0702 Predicted nucleoside-diphosphate-sugar epimerases; E=3e-32 PFAM: PF01073; 3-beta hydroxysteroid dehydrogenase; E=0.023; hypothetical protein 6217431 1790174 RB11494 Rhodopirellula baltica SH 1 hypothetical protein NP_870004.1 6216550 D 243090 CDS NP_870005.1 32477011 1790745 6217440..6217643 1 NC_005027.1 hypothetical protein 6217643 1790745 RB11496 Rhodopirellula baltica SH 1 hypothetical protein NP_870005.1 6217440 D 243090 CDS NP_870006.1 32477012 1795286 6217712..6218449 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S74850; hypothetical protein slr0865 - Synechocystis sp. (strain; E=4e-24 pir:F70793; hypothetical protein Rv3701c - Mycobacterium; E=5e-23 embl:CAC02633.1; (AL390114) possible hypothetical 35.4 Kd protein; E=3e-22; hypothetical protein 6218449 1795286 RB11497 Rhodopirellula baltica SH 1 hypothetical protein NP_870006.1 6217712 D 243090 CDS NP_870007.1 32477013 1792939 6218361..6219701 1 NC_005027.1 PMID: 97000351 best DB hits: BLAST: embl:CAB62702.1; (AL133422) hypothetical protein SCM1.44.; E=4e-37 pir:H70793; hypothetical protein Rv3703c - Mycobacterium; E=3e-24 pir:S74705; hypothetical protein slr1303 - Synechocystis sp. (strain; E=3e-21 COG: Rv3703c; COG1262 Uncharacterized BCR; E=3e-25; hypothetical protein 6219701 1792939 RB11498 Rhodopirellula baltica SH 1 hypothetical protein NP_870007.1 6218361 D 243090 CDS NP_870008.1 32477014 1791680 6219763..6221100 1 NC_005027.1 PMID: 92267380 best DB hits: BLAST: pir:JC1118; alkyl sulfatase (EC 3.1.6.-) - Pseudomonas sp -----; E=3e-54 gb:AAG59281.1; AE005641_6 (AE005641) orf, hypothetical protein; E=4e-41 gb:AAC43177.1; (U00006) matches PS00743: Beta-lactamases class B; E=8e-41 COG: yjcS; COG2015 Alkyl sulfatase and related hydrolases; E=8e-42 aq_974; COG0491 Zn-dependent hydrolases, including glyoxylases; E=0.002 PFAM: PF00753; Metallo-beta-lactamase superf; E=1.2e-29; alkyl sulfatase or beta-lactamase 6221100 1791680 RB11502 Rhodopirellula baltica SH 1 alkyl sulfatase or beta-lactamase NP_870008.1 6219763 D 243090 CDS NP_870009.1 32477015 1792767 complement(6221067..6221285) 1 NC_005027.1 hypothetical protein 6221285 1792767 RB11504 Rhodopirellula baltica SH 1 hypothetical protein NP_870009.1 6221067 R 243090 CDS NP_870010.1 32477016 1791761 complement(6221230..6221829) 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S76701; hypothetical protein - Synechocystis sp. (strain PCC; E=1e-11 pir:T04873; hypothetical protein F28A21.220 - Arabidopsis thaliana; E=5e-10 gb:AAD34060.1; AF151823_1 (AF151823) CGI-65 protein [Homo sapiens]; E=1e-07 COG: sll0096; COG0702 Predicted nucleoside-diphosphate-sugar epimerases; E=1e-12; hypothetical protein 6221829 1791761 RB11505 Rhodopirellula baltica SH 1 hypothetical protein NP_870010.1 6221230 R 243090 CDS NP_870011.1 32477017 1791369 complement(6221923..6222135) 1 NC_005027.1 PMID: 1732207 PMID: 8547259 best DB hits: BLAST: swissprot:P45418; YKDK_ERWCH HYPOTHETICAL 8.1 KD PROTEIN IN KDGK; E=3e-06 pir:H81078; 4-oxalocrotonate tautomerase, probable NMB1474; E=8e-06 gb:AAG42543.1; (AY013584) isomerase [Sinorhizobium; E=2e-04 COG: NMB1474; COG1942 Uncharacterized protein, 4-oxalocrotonate; E=8e-07 PFAM: PF01361; Tautomerase enzyme; E=1.2e-06; 4-oxalocrotonate tautomerase 6222135 1791369 RB11506 Rhodopirellula baltica SH 1 4-oxalocrotonate tautomerase NP_870011.1 6221923 R 243090 CDS NP_870012.1 32477018 1790454 complement(6222153..6222488) 1 NC_005027.1 hypothetical protein 6222488 1790454 RB11509 Rhodopirellula baltica SH 1 hypothetical protein NP_870012.1 6222153 R 243090 CDS NP_870013.1 32477019 1792738 complement(6222485..6223285) 1 NC_005027.1 PMID: 1435734 best DB hits: BLAST: ddbj:BAB05504.1; (AP001513) chaperonin involved in protein; E=5e-21 swissprot:P37584; CSAA_BACSU CSAA PROTEIN ----- pir: E69607; E=1e-20 pir:A83243; CsaA protein PA3221 [imported] - Pseudomonas aeruginosa; E=1e-20 COG: BH1785; COG0073 EMAP domain; E=5e-22 PFAM: PF01588; tRNA binding domain; E=2.3e-13; chaperonin involved in protein secretion (CsaA protein) 6223285 1792738 RB11510 Rhodopirellula baltica SH 1 chaperonin involved in protein secretion (CsaA protein) NP_870013.1 6222485 R 243090 CDS NP_870014.1 32477020 1793286 6223454..6224287 1 NC_005027.1 PMID: 8586283 best DB hits: BLAST: ddbj:BAB04002.1; (AP001508) BH0283~unknown conserved protein; E=5e-62 pir:E83199; conserved hypothetical protein PA3578 [imported] -; E=1e-57 pir:A83301; hypothetical protein PA2770 [imported] - Pseudomonas; E=3e-56 COG: BH0283; COG0384 Predicted epimerase, PhzC/PhzF homolog; E=5e-63 PFAM: PF02567; Phenazine biosynthesis-like protein; E=7.7e-27; phenazine biosynthesis protein PhzF 6224287 1793286 RB11512 Rhodopirellula baltica SH 1 phenazine biosynthesis protein PhzF NP_870014.1 6223454 D 243090 CDS NP_870015.1 32477021 1793187 6224420..6224644 1 NC_005027.1 PMID: 10952301 best DB hits: BLAST: pir:H82471; hypothetical protein VCA0329 VCA0298 VCA0343; E=1e-09; hypothetical protein 6224644 1793187 RB11515 Rhodopirellula baltica SH 1 hypothetical protein NP_870015.1 6224420 D 243090 CDS NP_870016.1 32477022 1795219 complement(6224708..6225331) 1 NC_005027.1 PMID: 9868367 best DB hits: BLAST: ddbj:BAB06554.1; (AP001516) BH2835~unknown conserved protein; E=7e-30 gb:AAK04163.1; AE006245_2 (AE006245) conserved hypothetical; E=5e-26 swissprot:P54168; YPGQ_BACSU HYPOTHETICAL 23.1 KD PROTEIN IN; E=8e-26 COG: BH2835; COG1418 Predicted HD superfamily hydrolase; E=7e-31 PFAM: PF01966; HD domain; E=2e-14; hypothetical protein 6225331 1795219 RB11516 Rhodopirellula baltica SH 1 hypothetical protein NP_870016.1 6224708 R 243090 CDS NP_870017.1 32477023 1796763 complement(6225316..6226065) 1 NC_005027.1 PMID: 10217496 best DB hits: BLAST: embl:CAB40581.1; (AJ010128) DNA alkylation repair enzyme; E=0.079 gb:AAK06230.1; AE006441_8 (AE006441) UNKNOWN PROTEIN [Lactococcus; E=0.13; DNA alkylation repair protein 6226065 1796763 RB11518 Rhodopirellula baltica SH 1 DNA alkylation repair protein NP_870017.1 6225316 R 243090 CDS NP_870018.1 32477024 1793677 complement(6226043..6226288) 1 NC_005027.1 hypothetical protein 6226288 1793677 RB11519 Rhodopirellula baltica SH 1 hypothetical protein NP_870018.1 6226043 R 243090 CDS NP_870019.1 32477025 1792407 complement(6226331..6226438) 1 NC_005027.1 hypothetical protein 6226438 1792407 RB11521 Rhodopirellula baltica SH 1 hypothetical protein NP_870019.1 6226331 R 243090 CDS NP_870020.1 32477026 1794755 complement(6226435..6226890) 1 NC_005027.1 hypothetical protein 6226890 1794755 RB11522 Rhodopirellula baltica SH 1 hypothetical protein NP_870020.1 6226435 R 243090 CDS NP_870021.1 32477027 1792403 complement(6226887..6227744) 1 NC_005027.1 PMID: 10688204 best DB hits: BLAST: pir:A81289; hypothetical protein Cj1433c [imported] - Campylobacter; E=2e-07 pir:E71020; hypothetical protein PH1458 - Pyrococcus horikoshii; E=5e-04 gb:AAD45550.1; U70376_15 (U70376) SpcY [Streptomyces netropsis]; E=0.077 COG: PH1458; COG1964 Predicted Fe-S oxidoreductases; E=5e-05; Fe-S oxidoreductase 6227744 1792403 RB11524 Rhodopirellula baltica SH 1 Fe-S oxidoreductase NP_870021.1 6226887 R 243090 CDS NP_870022.1 32477028 1790553 complement(6227668..6228693) 1 NC_005027.1 hypothetical protein 6228693 1790553 RB11525 Rhodopirellula baltica SH 1 hypothetical protein NP_870022.1 6227668 R 243090 CDS NP_870023.1 32477029 1795632 complement(6228684..6229397) 1 NC_005027.1 PMID: 7515051 best DB hits: BLAST: gb:AAA39802.1; (L30104) N-acetylgalactosaminyltransferase [Mus; E=2e-06 PFAM: PF00535; Glycosyl transferase; E=6.9e-07; N-acetylgalactosaminyltransferase 6229397 1795632 RB11527 Rhodopirellula baltica SH 1 N-acetylgalactosaminyltransferase NP_870023.1 6228684 R 243090 CDS NP_870024.1 32477030 1795916 complement(6229390..6230154) 1 NC_005027.1 PMID: 1601877 best DB hits: BLAST: gb:AAA35516.1; (M83651) beta-1,4; E=6e-07 ddbj:BAA04632.1; (D17809) beta-4N-acetylgalactosaminyltransferase; E=2e-06 gb:AAA39802.1; (L30104) N-acetylgalactosaminyltransferase [Mus; E=2e-06 COG: BS_yveT; COG0463 Glycosyltransferases involved in cell wall; E=0.003 PFAM: PF00535; Glycosyl transferase; E=5.2e-08; beta-1,4 N-acetylgalactosaminyltransferase 6230154 1795916 RB11529 Rhodopirellula baltica SH 1 beta-1,4 N-acetylgalactosaminyltransferase NP_870024.1 6229390 R 243090 CDS NP_870025.1 32477031 1792490 complement(6230151..6231488) 1 NC_005027.1 PMID: 9477341 best DB hits: BLAST: embl:CAC00604.2; (AL359776) hypothetical protein L5649.08; E=3e-07 pir:T20368; hypothetical protein D2045.9 - Caenorhabditis elegans; E=0.064 gb:AAD51367.1; AF177203_1 (AF177203) cerebral cell adhesion; E=0.26; hypothetical protein 6231488 1792490 RB11533 Rhodopirellula baltica SH 1 hypothetical protein NP_870025.1 6230151 R 243090 CDS NP_870026.1 32477032 1790566 complement(6231499..6232071) 1 NC_005027.1 hypothetical protein 6232071 1790566 RB11537 Rhodopirellula baltica SH 1 hypothetical protein NP_870026.1 6231499 R 243090 CDS NP_870027.1 32477033 1791804 6232054..6232716 1 NC_005027.1 hypothetical protein 6232716 1791804 RB11539 Rhodopirellula baltica SH 1 hypothetical protein NP_870027.1 6232054 D 243090 CDS NP_870028.1 32477034 1793582 complement(6232068..6234077) 1 NC_005027.1 signal peptide 6234077 1793582 RB11540 Rhodopirellula baltica SH 1 signal peptide NP_870028.1 6232068 R 243090 CDS NP_870029.1 32477035 1791897 6232741..6233466 1 NC_005027.1 hypothetical protein 6233466 1791897 RB11542 Rhodopirellula baltica SH 1 hypothetical protein NP_870029.1 6232741 D 243090 CDS NP_870030.1 32477036 1793609 6233896..6234465 1 NC_005027.1 hypothetical protein 6234465 1793609 RB11543 Rhodopirellula baltica SH 1 hypothetical protein NP_870030.1 6233896 D 243090 CDS NP_870031.1 32477037 1790639 complement(6234584..6235075) 1 NC_005027.1 signal peptide 6235075 1790639 RB11545 Rhodopirellula baltica SH 1 signal peptide NP_870031.1 6234584 R 243090 CDS NP_870032.1 32477038 1794059 complement(6235200..6236972) 1 NC_005027.1 signal peptide 6236972 1794059 RB11548 Rhodopirellula baltica SH 1 signal peptide NP_870032.1 6235200 R 243090 CDS NP_870033.1 32477039 1791284 complement(6237028..6237633) 1 NC_005027.1 PMID: 9654132 PMID: 8905231 best DB hits: BLAST: pir:S75047; drgA protein - Synechocystis sp. (strain PCC 6803); E=3e-60 swissprot:Q55233; DRGA_SYNY3 DRGA PROTEIN ----- gb: AAA91952.1; E=7e-56 pir:E82996; probable nitroreductase PA5190 [imported] - Pseudomonas; E=7e-41 COG: slr1719; COG0778 Nitroreductase; E=3e-61 PFAM: PF00881; Nitroreductase; E=1.3e-44; drgA protein 6237633 drga 1791284 drga Rhodopirellula baltica SH 1 drgA protein NP_870033.1 6237028 R 243090 CDS NP_870034.1 32477040 1790519 complement(6237704..6237922) 1 NC_005027.1 hypothetical protein 6237922 1790519 RB11551 Rhodopirellula baltica SH 1 hypothetical protein NP_870034.1 6237704 R 243090 CDS NP_870035.1 32477041 1795276 complement(6238060..6238770) 1 NC_005027.1 hypothetical protein 6238770 1795276 RB11553 Rhodopirellula baltica SH 1 hypothetical protein NP_870035.1 6238060 R 243090 CDS NP_870036.1 32477042 1795422 6238803..6240191 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S75116; squalene-hopene-cyclase - Synechocystis sp. (strain PCC; E=0.16; squalene-hopene-cyclase 6240191 1795422 RB11559 Rhodopirellula baltica SH 1 squalene-hopene-cyclase NP_870036.1 6238803 D 243090 CDS NP_870037.1 32477043 1792162 6240630..6241703 1 NC_005027.1 PMID: 1924314 best DB hits: BLAST: ddbj:BAB04773.1; (AP001510) transposase (08)ABC transporter; E=2e-53 ddbj:BAA83955.1; (AB024563) YFIL [Bacillus halodurans]; E=1e-52 ddbj:BAB05817.1; (AP001514) ABC transporter (ATP-binding protein); E=9e-52 COG: BH1054_2; COG0842 Permease component of an ABC-transporter; E=8e-54 BH2098; COG1131 ABC-type multidrug transport system, ATPase; E=8e-53 ybhF; COG1131 ABC-type multidrug transport system, ATPase component; E=5e-35 PFAM: PF00005; ABC transporter; E=2.1e-54; ABC-type multidrug transport system, ATPase component 6241703 1792162 RB11563 Rhodopirellula baltica SH 1 ABC-type multidrug transport system, ATPase component NP_870037.1 6240630 D 243090 CDS NP_870038.1 32477044 1790675 6241706..6243034 1 NC_005027.1 PMID: 9384377 best DB hits: BLAST: pir:H69803; ABC transporter (ATP-binding protein) homolog yfiM -; E=1e-05 ddbj:BAA83956.1; (AB024563) YFIM [Bacillus halodurans]; E=0.83 ddbj:BAB04774.1; (AP001510) BH1055~unknown conserved protein; E=0.83 COG: BS_yfiM; COG0842 Permease component of an ABC-transporter; E=1e-06; ABC transporter permease 6243034 1790675 RB11564 Rhodopirellula baltica SH 1 ABC transporter permease NP_870038.1 6241706 D 243090 CDS NP_870039.1 32477045 1792908 6243111..6243698 1 NC_005027.1 hypothetical protein 6243698 1792908 RB11566 Rhodopirellula baltica SH 1 hypothetical protein NP_870039.1 6243111 D 243090 CDS NP_870040.1 32477046 1795252 complement(6243814..6244071) 1 NC_005027.1 hypothetical protein 6244071 1795252 RB11569 Rhodopirellula baltica SH 1 hypothetical protein NP_870040.1 6243814 R 243090 CDS NP_870041.1 32477047 1793336 complement(6244084..6244758) 1 NC_005027.1 hypothetical protein 6244758 1793336 RB11573 Rhodopirellula baltica SH 1 hypothetical protein NP_870041.1 6244084 R 243090 CDS NP_870042.1 32477048 1790338 6244601..6245650 1 NC_005027.1 best DB hits: PFAM: PF00432; Prenyltransferase and squalene ox; E=0.0052; hypothetical protein 6245650 1790338 RB11575 Rhodopirellula baltica SH 1 hypothetical protein NP_870042.1 6244601 D 243090 CDS NP_870043.1 32477049 1789960 6245659..6246465 1 NC_005027.1 hypothetical protein 6246465 1789960 RB11578 Rhodopirellula baltica SH 1 hypothetical protein NP_870043.1 6245659 D 243090 CDS NP_870044.1 32477050 1790917 complement(6246565..6247827) 1 NC_005027.1 PMID: 2987847 PMID: 7584024 PMID: 2846289 best DB hits: BLAST: swissprot:P49994; DNAA_STAAU CHROMOSOMAL REPLICATION INITIATOR; E=1e-29 swissprot:P05648; DNAA_BACSU CHROMOSOMAL REPLICATION INITIATOR; E=4e-29 swissprot:P35887; DNAA_CAUCR CHROMOSOMAL REPLICATION INITIATOR; E=1e-28 COG: BS_dnaA; COG0593 ATPase involved in DNA replication initiation; E=4e-30 PFAM: PF00004; ATPase associated with variou; E=0.00043 PF00308; Bacterial dnaA protein; E=2e-48; chromosome replication initiator DnaA 6247827 dnaA 1790917 dnaA Rhodopirellula baltica SH 1 chromosome replication initiator DnaA NP_870044.1 6246565 R 243090 CDS NP_870045.1 32477051 1791875 complement(6247852..6249048) 1 NC_005027.1 PMID: 10908675 PMID: 7496536 PMID: 8482384 best DB hits: BLAST: pir:A71960; probable nitrogenase cofactor synthesis protein nifS -; E=1e-50 pir:D64547; iron-sulfur cofactor synthesis protein - Helicobacter; E=2e-50 swissprot:Q43884; NIFS_ANAAZ NIFS PROTEIN ----- gb: AAA87249.1; E=6e-49 COG: jhp0206; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; E=1e-51 PFAM: PF00266; Aminotransferase class-V; E=1.6e-60; cysteine desulfurase 6249048 1791875 RB11582 Rhodopirellula baltica SH 1 cysteine desulfurase NP_870045.1 6247852 R 243090 CDS NP_870046.1 32477052 1791460 complement(6249045..6249698) 1 NC_005027.1 hypothetical protein 6249698 1791460 RB11585 Rhodopirellula baltica SH 1 hypothetical protein NP_870046.1 6249045 R 243090 CDS NP_870047.1 32477053 1795426 6249757..6251379 1 NC_005027.1 PMID: 10086841 best DB hits: BLAST: ddbj:BAB05280.1; (AP001512) BH1561~unknown conserved protein; E=4e-19 pir:B83247; hypothetical protein PA3197 [imported] - Pseudomonas; E=3e-17 pir:S72956; hypothetical protein - Mycobacterium leprae -----; E=4e-16 COG: BH1561; COG1386 Predicted transcriptional regulator containing the; E=4e-20 NMB0739_2; COG1386 Predicted transcriptional regulator containing; E=1e-05; transcriptional regulator 6251379 1795426 RB11587 Rhodopirellula baltica SH 1 transcriptional regulator NP_870047.1 6249757 D 243090 CDS NP_870048.1 32477054 1792608 complement(6250897..6251607) 1 NC_005027.1 transmembrane protein 6251607 1792608 RB11589 Rhodopirellula baltica SH 1 transmembrane protein NP_870048.1 6250897 R 243090 CDS NP_870049.1 32477055 1793432 complement(6251620..6251835) 1 NC_005027.1 hypothetical protein 6251835 1793432 RB11593 Rhodopirellula baltica SH 1 hypothetical protein NP_870049.1 6251620 R 243090 CDS NP_870050.1 32477056 1793664 6251792..6252298 1 NC_005027.1 PMID: 7699720 best DB hits: BLAST: ddbj:BAB05983.1; (AP001514) two-component response regulator; E=2e-09 gb:AAF12879.1; AF022186_1 (AF022186) unknown [Cyanidium caldarium]; E=5e-09 gb:AAD47845.1; AF171076_1 (AF171076) probable CheY1 protein; E=6e-09 COG: BH2264; COG0745 Response regulators consisting of a CheY-like; E=2e-10 VCA1096; COG0784 CheY-like receiver domains; E=6e-10 HP1365; COG0745 Response regulators consisting of a CheY-like; E=1e-09 PFAM: PF00072; Response regulator receiver doma; E=6.6e-17; two-component response regulator 6252298 1793664 RB11594 Rhodopirellula baltica SH 1 two-component response regulator NP_870050.1 6251792 D 243090 CDS NP_870051.1 32477057 1790561 6252371..6254134 1 NC_005027.1 PMID: 1944223 best DB hits: BLAST: pir:C75333; general secretion pathway protein E - Deinococcus; E=6e-98 pir:E72032; general secretion pathway protein E CP1055 [imported] -; E=4e-89 pir:D71499; probable gen. secretion protein E - Chlamydia; E=1e-88 COG: DR1964; COG2804 Predicted ATPases involved in pili biogenesis, PilB; E=5e-99 PFAM: PF00437; Bacterial type II secretion system p; E=1.3e-138; general secretion pathway protein E 6254134 1790561 RB11595 Rhodopirellula baltica SH 1 general secretion pathway protein E NP_870051.1 6252371 D 243090 CDS NP_870052.1 32477058 1791381 6254216..6255379 1 NC_005027.1 PMID: 1640836 best DB hits: BLAST: pir:A75344; pilin biogenesis protein - Deinococcus radiodurans; E=4e-35 swissprot:P45793; TAPC_AERHY TYPE IV PILUS ASSEMBLY PROTEIN TAPC; E=2e-33 gb:AAC23568.1; (AF059249) type IV pilus assembly protein TapC; E=8e-33 COG: DR1863; COG1459 General secretory pathway protein F; E=3e-36 PFAM: PF00482; Bacterial type II secretion system p; E=2e-53; general secretion pathway protein F 6255379 1791381 RB11597 Rhodopirellula baltica SH 1 general secretion pathway protein F NP_870052.1 6254216 D 243090 CDS NP_870053.1 32477059 1791739 6255376..6255735 1 NC_005027.1 PMID: 10086841 best DB hits: BLAST: ddbj:BAB06546.1; (AP001516) exogenous DNA-binding protein; E=0.008 pir:T45730; peroxidase-like protein - Arabidopsis thaliana -----; E=0.46; exogenous DNA-binding protein 6255735 1791739 RB11598 Rhodopirellula baltica SH 1 exogenous DNA-binding protein NP_870053.1 6255376 D 243090 CDS NP_870054.1 32477060 1793495 complement(6255736..6256485) 1 NC_005027.1 hypothetical protein 6256485 1793495 RB11599 Rhodopirellula baltica SH 1 hypothetical protein NP_870054.1 6255736 R 243090 CDS NP_870055.1 32477061 1792770 6256500..6256712 1 NC_005027.1 hypothetical protein 6256712 1792770 RB11601 Rhodopirellula baltica SH 1 hypothetical protein NP_870055.1 6256500 D 243090 CDS NP_870056.1 32477062 1796794 6256722..6256835 1 NC_005027.1 hypothetical protein 6256835 1796794 RB11603 Rhodopirellula baltica SH 1 hypothetical protein NP_870056.1 6256722 D 243090 CDS NP_870057.1 32477063 1790731 complement(6256871..6258829) 1 NC_005027.1 PMID: 11406410 PMID: 1574005 best DB hits: BLAST: pir:E83529; sensorresponse regulator hybrid PA0928 [imported] -; E=6e-47 pir:B82427; sensor protein TorS VCA0709 [imported] - Vibrio cholerae; E=1e-45 gb:AAF04854.1; AF197912_1 (AF197912) histidine protein kinase; E=8e-44 COG: PA0928; COG0642 Sensory transduction histidine kinases; E=6e-48 PFAM: PF00672; HAMP domain; E=3.8e-12 PF00512; His Kinase A (phosphoacceptor); E=2.4e-25 PF02518; Histidine kinase-, DNA gyrase; E=6.4e-40; sensory transduction histidine kinase 6258829 1790731 RB11604 Rhodopirellula baltica SH 1 sensory transduction histidine kinase NP_870057.1 6256871 R 243090 CDS NP_870058.1 32477064 1792891 6258999..6260507 1 NC_005027.1 best DB hits: BLAST: pir:T37781; probable cytoskeleton assembly control protein - fission; E=0.023 embl:CAA84826.1; (Z35768) ORF YBL007c [Saccharomyces cerevisiae]; E=0.037 pir:T50995; related to cytoskeleton assembly control protein SLA1; E=0.17; cytoskeleton assembly control protein 6260507 1792891 RB11607 Rhodopirellula baltica SH 1 cytoskeleton assembly control protein NP_870058.1 6258999 D 243090 CDS NP_870059.1 32477065 1793984 complement(6260470..6260715) 1 NC_005027.1 hypothetical protein 6260715 1793984 RB11612 Rhodopirellula baltica SH 1 hypothetical protein NP_870059.1 6260470 R 243090 CDS NP_870060.1 32477066 1794378 6261140..6262327 1 NC_005027.1 best DB hits: PFAM: PF00589; Phage integrase; E=4.9e-07; hypothetical protein 6262327 1794378 RB11615 Rhodopirellula baltica SH 1 hypothetical protein NP_870060.1 6261140 D 243090 CDS NP_870061.1 32477067 1789949 complement(6262452..6262622) 1 NC_005027.1 hypothetical protein 6262622 1789949 RB11616 Rhodopirellula baltica SH 1 hypothetical protein NP_870061.1 6262452 R 243090 CDS NP_870062.1 32477068 1791266 complement(6262796..6263689) 1 NC_005027.1 hypothetical protein 6263689 1791266 RB11617 Rhodopirellula baltica SH 1 hypothetical protein NP_870062.1 6262796 R 243090 CDS NP_870063.1 32477069 1792307 6263708..6265366 1 NC_005027.1 PMID: 8412658 PMID: 9440532 best DB hits: BLAST: gb:AAG59530.1; AE005666_2 (AE005666) restriction; E=2e-32 swissprot:Q47282; T1ME_ECOLI TYPE I RESTRICTION ENZYME ECOEI M; E=2e-32 pir:A47200; EcoA system protein M - Escherichia coli ----- gb:; E=1e-31 COG: hsdM; COG0286 Type I restriction-modification system; E=3e-19 PFAM: PF02506; Type I restriction modification s; E=6.9e-10 PF02384; N-6 DNA Methylase; E=3.2e-16; type I restriction enzyme M protein 6265366 1792307 RB11618 Rhodopirellula baltica SH 1 type I restriction enzyme M protein NP_870063.1 6263708 D 243090 CDS NP_870064.1 32477070 1792001 6265363..6266544 1 NC_005027.1 PMID: 6304321 best DB hits: BLAST: gb:AAG18734.1; (AE004978) type I restriction modification enzyme,; E=6e-23 swissprot:P06990; T1SB_ECOLI TYPE I RESTRICTION ENZYME ECOBI; E=8e-16 pir:B64316; restriction modification system S chain homolog -; E=2e-12 COG: VNG0107G; COG0732 Restriction endonuclease S subunits; E=6e-24 PFAM: PF01420; Type I restriction modification; E=1.6e-10; type I restriction modification enzyme, S subunit 6266544 1792001 RB11619 Rhodopirellula baltica SH 1 type I restriction modification enzyme, S subunit NP_870064.1 6265363 D 243090 CDS NP_870065.1 32477071 1795209 6266567..6269980 1 NC_005027.1 PMID: 8412658 best DB hits: BLAST: gb:AAG59531.1; AE005666_3 (AE005666) restriction; E=5e-31 swissprot:Q07736; T1RA_ECOLI TYPE I RESTRICTION ENZYME ECOAI R; E=6e-31 swissprot:P08956; T1RK_ECOLI TYPE I RESTRICTION ENZYME ECOKI R; E=1e-30 COG: hsdR; COG0610 Restriction enzymes type I helicase subunits and; E=1e-31 VC0812_2; COG1061 DNA or RNA helicases of superfamily II; E=9e-13 MJECL40; COG0610 Restriction enzymes type I helicase subunits and; E=3e-05 PFAM: PF00270; DEAD/DEAH box helicase; E=1.5e-06 PF00271; Helicase conserved C-terminal doma; E=0.00061; type I restriction enzyme, R protein 6269980 1795209 RB11622 Rhodopirellula baltica SH 1 type I restriction enzyme, R protein NP_870065.1 6266567 D 243090 CDS NP_870066.1 32477072 1792183 6269998..6271044 1 NC_005027.1 hypothetical protein 6271044 1792183 RB11624 Rhodopirellula baltica SH 1 hypothetical protein NP_870066.1 6269998 D 243090 CDS NP_870067.1 32477073 1792257 complement(6271177..6272688) 1 NC_005027.1 PMID: 8051008 best DB hits: BLAST: pir:G69754; hypothetical protein yccF - Bacillus subtilis -----; E=0.030 ddbj:BAB07325.1; (AP001519) preprotein translocase subunit; E=0.082 pir:E81368; preprotein translocase SECA chain Cj0942c [imported] -; E=0.16 COG: BS_yccF; COG3318 Predicted metal-binding protein related to the; E=0.003 BH3606; COG0653 Preprotein translocase subunit SecA (ATPase, RNA; E=0.008 PFAM: PF02810; SEC-C motif; E=1.9e-08; preprotein translocase SecA chain 6272688 1792257 RB11626 Rhodopirellula baltica SH 1 preprotein translocase SecA chain NP_870067.1 6271177 R 243090 CDS NP_870068.1 32477074 1790642 complement(6272877..6273080) 1 NC_005027.1 hypothetical protein 6273080 1790642 RB11627 Rhodopirellula baltica SH 1 hypothetical protein NP_870068.1 6272877 R 243090 CDS NP_870069.1 32477075 1790099 complement(6273215..6273466) 1 NC_005027.1 hypothetical protein 6273466 1790099 RB11628 Rhodopirellula baltica SH 1 hypothetical protein NP_870069.1 6273215 R 243090 CDS NP_870070.1 32477076 1795702 complement(6273457..6273624) 1 NC_005027.1 hypothetical protein 6273624 1795702 RB11629 Rhodopirellula baltica SH 1 hypothetical protein NP_870070.1 6273457 R 243090 CDS NP_870071.1 32477077 1795194 6273726..6274040 1 NC_005027.1 PMID: 8576032 best DB hits: PFAM: PF01418; Helix-turn-helix domain, rpiR; E=0.00028 PF01381; Helix-turn-helix; E=0.27; hypothetical protein 6274040 1795194 RB11631 Rhodopirellula baltica SH 1 hypothetical protein NP_870071.1 6273726 D 243090 CDS NP_870072.1 32477078 1793413 6274043..6274366 1 NC_005027.1 hypothetical protein 6274366 1793413 RB11633 Rhodopirellula baltica SH 1 hypothetical protein NP_870072.1 6274043 D 243090 CDS NP_870073.1 32477079 1792689 6274366..6275235 1 NC_005027.1 PMID: 3118332 best DB hits: BLAST: swissprot:P08076; STRR_STRGR STREPTOMYCIN BIOSYNTHESIS OPERON; E=5e-04 pir:C26674; streptomycin resistance hypothetical protein I -; E=0.032 embl:CAB45047.1; (AL078635) transcriptional regulator; E=0.12; streptomycin biosynthesis operon regulatory protein 6275235 strR 1792689 strR Rhodopirellula baltica SH 1 streptomycin biosynthesis operon regulatory protein NP_870073.1 6274366 D 243090 CDS NP_870074.1 32477080 1794379 complement(6275232..6275447) 1 NC_005027.1 hypothetical protein 6275447 1794379 RB11636 Rhodopirellula baltica SH 1 hypothetical protein NP_870074.1 6275232 R 243090 CDS NP_870075.1 32477081 1795619 6275480..6276829 1 NC_005027.1 hypothetical protein 6276829 1795619 RB11637 Rhodopirellula baltica SH 1 hypothetical protein NP_870075.1 6275480 D 243090 CDS NP_870076.1 32477082 1789983 complement(6276815..6276943) 1 NC_005027.1 hypothetical protein 6276943 1789983 RB11638 Rhodopirellula baltica SH 1 hypothetical protein NP_870076.1 6276815 R 243090 CDS NP_870077.1 32477083 1790564 6276931..6277122 1 NC_005027.1 hypothetical protein 6277122 1790564 RB11639 Rhodopirellula baltica SH 1 hypothetical protein NP_870077.1 6276931 D 243090 CDS NP_870078.1 32477084 1794632 complement(6277277..6277447) 1 NC_005027.1 hypothetical protein 6277447 1794632 RB11640 Rhodopirellula baltica SH 1 hypothetical protein NP_870078.1 6277277 R 243090 CDS NP_870079.1 32477085 1794964 complement(6277621..6278514) 1 NC_005027.1 hypothetical protein 6278514 1794964 RB11641 Rhodopirellula baltica SH 1 hypothetical protein NP_870079.1 6277621 R 243090 CDS NP_870080.1 32477086 1790986 6278533..6280191 1 NC_005027.1 PMID: 8412658 best DB hits: BLAST: gb:AAG59530.1; AE005666_2 (AE005666) restriction; E=1e-32 swissprot:Q47282; T1ME_ECOLI TYPE I RESTRICTION ENZYME ECOEI M; E=5e-32 pir:A47200; EcoA system protein M - Escherichia coli ----- gb:; E=5e-32 COG: hsdM; COG0286 Type I restriction-modification system; E=1e-19 PFAM: PF02506; Type I restriction modification s; E=7e-11 PF02384; N-6 DNA Methylase; E=1.9e-15; type I restriction enzym, M protein 6280191 1790986 RB11642 Rhodopirellula baltica SH 1 type I restriction enzym, M protein NP_870080.1 6278533 D 243090 CDS NP_870081.1 32477087 1795471 6280188..6281357 1 NC_005027.1 PMID: 6304321 best DB hits: BLAST: pir:B64316; restriction modification system S chain homolog -; E=8e-25 pir:G82522; type I restriction-modification system specificity; E=3e-22 pir:C82823; type I restriction-modification system specificity; E=4e-22 COG: MJ0130m; COG0732 Restriction endonuclease S subunits; E=8e-26 PFAM: PF01420; Type I restriction modification D; E=2.6e-32; restriction modification system S chain-like protein 6281357 hsdS 1795471 hsdS Rhodopirellula baltica SH 1 restriction modification system S chain-like protein NP_870081.1 6280188 D 243090 CDS NP_870082.1 32477088 1793375 complement(6281254..6282816) 1 NC_005027.1 PMID: 10545495 best DB hits: BLAST: gb:AAF63384.1; (AF245277) kinesin Unc104KIF1a homolog; E=0.024 swissprot:P08799; MYS2_DICDI MYOSIN II HEAVY CHAIN, NON MUSCLE; E=0.12 swissprot:P50533; XCPE_XENLA CHROMOSOME ASSEMBLY PROTEIN XCAP-E; E=0.14; kinesin Unc104/KIF1a-like protein 6282816 1793375 RB11644 Rhodopirellula baltica SH 1 kinesin Unc104/KIF1a-like protein NP_870082.1 6281254 R 243090 CDS NP_870083.1 32477089 1796920 6282925..6283401 1 NC_005027.1 hypothetical protein 6283401 1796920 RB11647 Rhodopirellula baltica SH 1 hypothetical protein NP_870083.1 6282925 D 243090 CDS NP_870084.1 32477090 1791564 6283377..6283484 1 NC_005027.1 hypothetical protein 6283484 1791564 RB11649 Rhodopirellula baltica SH 1 hypothetical protein NP_870084.1 6283377 D 243090 CDS NP_870085.1 32477091 1795330 complement(6283604..6284983) 1 NC_005027.1 PMID: 10086841 best DB hits: BLAST: gb:AAC23913.1; (AF039207) NADH-dependent dehydrogenase homolog; E=6e-10 gb:AAG09709.1; AF218837_4 (AF218837) unknown [Pasteurella; E=3e-09 ddbj:BAB04967.1; (AP001511) NADH-dependent dyhydrogenase; E=4e-09 COG: BH1248; COG0673 Predicted dehydrogenases and related proteins; E=4e-10 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=2.1e-18; NADH-dependent deydrogenase 6284983 1795330 RB11650 Rhodopirellula baltica SH 1 NADH-dependent deydrogenase NP_870085.1 6283604 R 243090 CDS NP_870086.1 32477092 1795700 complement(6285093..6286004) 1 NC_005027.1 signal peptide 6286004 1795700 RB11652 Rhodopirellula baltica SH 1 signal peptide NP_870086.1 6285093 R 243090 CDS NP_870087.1 32477093 1794154 complement(6286299..6287549) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: swissprot:Q09296; YQO6_CAEEL HYPOTHETICAL 55.9 KD PROTEIN EEED8.6; E=3e-08 pir:H83290; conserved hypothetical protein PA2831 [imported] -; E=7e-07 pir:T33157; hypothetical protein F56H1.5 - Caenorhabditis elegans; E=9e-07 COG: PA2831; COG2866 Predicted carboxypeptidase; E=7e-08; carboxypeptidase 6287549 1794154 RB11654 Rhodopirellula baltica SH 1 carboxypeptidase NP_870087.1 6286299 R 243090 CDS NP_870088.1 32477094 1795650 6288092..6290338 1 NC_005027.1 PMID: 9371463 best DB hits: BLAST: pir:H69064; serinethreonine protein kinase related protein -; E=0.001 pir:T26310; hypothetical protein W09D6.1 - Caenorhabditis elegans; E=0.64 COG: MTH1485; COG1520 Uncharacterized proteins of WD40-like repeat family; E=1e-04 PFAM: PF01011; PQQ enzyme repeat; E=0.047; serine/threonine protein kinase related protein 6290338 1795650 RB11660 Rhodopirellula baltica SH 1 serine/threonine protein kinase related protein NP_870088.1 6288092 D 243090 CDS NP_870089.1 32477095 1790891 6290362..6290469 1 NC_005027.1 hypothetical protein 6290469 1790891 RB11662 Rhodopirellula baltica SH 1 hypothetical protein NP_870089.1 6290362 D 243090 CDS NP_870090.1 32477096 1790235 6290653..6292005 1 NC_005027.1 PMID: 9294455 best DB hits: BLAST: embl:CAB61680.1; (AL133213) transmembrane transport; E=6e-11 pir:T47026; hypothetical protein [imported] - Yersinia pestis; E=4e-08 swissprot:P46333; CSBC_BACSU PROBABLE METABOLITE TRANSPORT PROTEIN; E=2e-07 COG: BS_yxcC; COG0477 Permeases of the major facilitator superfamily; E=2e-08 PFAM: PF00083; Sugar (and other) transporter; E=2.7e-13; transmembrane transport protein 6292005 1790235 RB11663 Rhodopirellula baltica SH 1 transmembrane transport protein NP_870090.1 6290653 D 243090 CDS NP_870091.1 32477097 1793852 6292018..6292128 1 NC_005027.1 hypothetical protein 6292128 1793852 RB11664 Rhodopirellula baltica SH 1 hypothetical protein NP_870091.1 6292018 D 243090 CDS NP_870092.1 32477098 1792522 complement(6292134..6292613) 1 NC_005027.1 hypothetical protein 6292613 1792522 RB11665 Rhodopirellula baltica SH 1 hypothetical protein NP_870092.1 6292134 R 243090 CDS NP_870093.1 32477099 1796905 complement(6292707..6293231) 1 NC_005027.1 hypothetical protein 6293231 1796905 RB11667 Rhodopirellula baltica SH 1 hypothetical protein NP_870093.1 6292707 R 243090 CDS NP_870094.1 32477100 1792946 6293213..6294166 1 NC_005027.1 PMID: 3595559 best DB hits: BLAST: gb:AAF13178.1; AF181079_1 (AF181079) sensor kinase homolog; E=2e-28 pir:D83491; probable sensorresponse regulator hybrid PA1243; E=4e-28 gb:AAG00949.1; AF273679_3 (AF273679) FixL [Rhizobium etli]; E=3e-27 COG: PA1243; COG0642 Sensory transduction histidine kinases; E=4e-29 PFAM: PF00512; His Kinase A (phosphoacceptor) doma; E=5.2e-12 PF02518; Histidine kinase-, DNA gyrase B-, p; E=3.1e-28; sensor kinase-like protein 6294166 1792946 RB11668 Rhodopirellula baltica SH 1 sensor kinase-like protein NP_870094.1 6293213 D 243090 CDS NP_870095.1 32477101 1793968 6294163..6295608 1 NC_005027.1 PMID: 8346225 best DB hits: BLAST: swissprot:Q06065; ATOC_ECOLI ACETOACETATE METABOLISM REGULATORY; E=5e-91 swissprot:P03029; NTRC_KLEPN NITROGEN ASSIMILATION REGULATORY; E=4e-90 embl:CAA26473.1; (X02617) pot. ntrC gene product (aa 1-469); E=8e-90 COG: atoC; COG2204 AAA superfamily ATPases with N-terminal receiver; E=4e-92 PFAM: PF00072; Response regulator receiver doma; E=2.3e-29 PF00158; Sigma-54 interaction domain; E=5.1e-128; cetoacetate metabolism regulatory protein atoC 6295608 atoC 1793968 atoC Rhodopirellula baltica SH 1 cetoacetate metabolism regulatory protein atoC NP_870095.1 6294163 D 243090 CDS NP_870096.1 32477102 1795926 6295656..6296792 1 NC_005027.1 PMID: 2974033 best DB hits: BLAST: pir:A75265; ferric enterobactin esterase-related protein -; E=0.002 COG: DR2506; COG2382 Enterochelin esterase and related enzymes; E=2e-04; ferric enterobactin esterase-related protein FeS 6296792 1795926 RB11670 Rhodopirellula baltica SH 1 ferric enterobactin esterase-related protein FeS NP_870096.1 6295656 D 243090 CDS NP_870097.1 32477103 1790395 6296756..6296929 1 NC_005027.1 hypothetical protein 6296929 1790395 RB11671 Rhodopirellula baltica SH 1 hypothetical protein NP_870097.1 6296756 D 243090 CDS NP_870098.1 32477104 1792070 6297076..6297429 1 NC_005027.1 hypothetical protein 6297429 1792070 RB11672 Rhodopirellula baltica SH 1 hypothetical protein NP_870098.1 6297076 D 243090 CDS NP_870099.1 32477105 1793327 complement(6297457..6299253) 1 NC_005027.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 6299253 lepA 1793327 lepA Rhodopirellula baltica SH 1 GTP-binding protein LepA NP_870099.1 6297457 R 243090 CDS NP_870100.1 32477106 1795881 6299390..6300109 1 NC_005027.1 hypothetical protein 6300109 1795881 RB11674 Rhodopirellula baltica SH 1 hypothetical protein NP_870100.1 6299390 D 243090 CDS NP_870101.1 32477107 1794064 6299494..6300012 1 NC_005027.1 signal peptide 6300012 1794064 RB11675 Rhodopirellula baltica SH 1 signal peptide NP_870101.1 6299494 D 243090 CDS NP_870102.1 32477108 1791733 complement(6299509..6300075) 1 NC_005027.1 hypothetical protein 6300075 1791733 RB11676 Rhodopirellula baltica SH 1 hypothetical protein NP_870102.1 6299509 R 243090 CDS NP_870103.1 32477109 1790288 complement(6300078..6300221) 1 NC_005027.1 hypothetical protein 6300221 1790288 RB11677 Rhodopirellula baltica SH 1 hypothetical protein NP_870103.1 6300078 R 243090 CDS NP_870104.1 32477110 1794237 6300187..6300366 1 NC_005027.1 hypothetical protein 6300366 1794237 RB11678 Rhodopirellula baltica SH 1 hypothetical protein NP_870104.1 6300187 D 243090 CDS NP_870105.1 32477111 1789923 6300368..6300523 1 NC_005027.1 hypothetical protein 6300523 1789923 RB11679 Rhodopirellula baltica SH 1 hypothetical protein NP_870105.1 6300368 D 243090 CDS NP_870106.1 32477112 1790402 complement(6300456..6300635) 1 NC_005027.1 hypothetical protein 6300635 1790402 RB11680 Rhodopirellula baltica SH 1 hypothetical protein NP_870106.1 6300456 R 243090 CDS NP_870107.1 32477113 1790941 6300601..6300780 1 NC_005027.1 hypothetical protein 6300780 1790941 RB11681 Rhodopirellula baltica SH 1 hypothetical protein NP_870107.1 6300601 D 243090 CDS NP_870108.1 32477114 1795855 complement(6300763..6300903) 1 NC_005027.1 hypothetical protein 6300903 1795855 RB11682 Rhodopirellula baltica SH 1 hypothetical protein NP_870108.1 6300763 R 243090 CDS NP_870109.1 32477115 1792536 complement(6300897..6301049) 1 NC_005027.1 hypothetical protein 6301049 1792536 RB11683 Rhodopirellula baltica SH 1 hypothetical protein NP_870109.1 6300897 R 243090 CDS NP_870110.1 32477116 1792456 complement(6301077..6301256) 1 NC_005027.1 hypothetical protein 6301256 1792456 RB11685 Rhodopirellula baltica SH 1 hypothetical protein NP_870110.1 6301077 R 243090 CDS NP_870111.1 32477117 1791362 6301222..6301401 1 NC_005027.1 hypothetical protein 6301401 1791362 RB11686 Rhodopirellula baltica SH 1 hypothetical protein NP_870111.1 6301222 D 243090 CDS NP_870112.1 32477118 1796812 6301412..6301528 1 NC_005027.1 hypothetical protein 6301528 1796812 RB11687 Rhodopirellula baltica SH 1 hypothetical protein NP_870112.1 6301412 D 243090 CDS NP_870113.1 32477119 1795675 complement(6301529..6302842) 1 NC_005027.1 PMID: 2033061 PMID: 1447141 best DB hits: BLAST: gb:AAC16417.1; (AF026386) WaaA [Salmonella typhimurium]; E=4e-53 gb:AAC69691.1; (AF019747) Kdo transferase WaaA [Escherichia coli]; E=9e-52 swissprot:P23282; KDTA_ECOLI 3-DEOXY-D-MANNO-OCTULOSONIC-ACID; E=1e-51 COG: kdtA; COG1519 3-Deoxy-D-manno-octulosonic-acid transferase; E=9e-53; 3-deoxy-D-manno-octulosonic-acid transferase 6302842 kdtA 1795675 kdtA Rhodopirellula baltica SH 1 3-deoxy-D-manno-octulosonic-acid transferase NP_870113.1 6301529 R 243090 CDS NP_870114.1 32477120 1790695 complement(6302988..6306704) 1 NC_005027.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 6306704 SecA 1790695 SecA Rhodopirellula baltica SH 1 preprotein translocase subunit SecA NP_870114.1 6302988 R 243090 CDS NP_870115.1 32477121 1794281 complement(6306775..6307680) 1 NC_005027.1 PMID: 10653753 best DB hits: BLAST: embl:CAB72937.1; (AJ243321) hypothetical protein [Lactobacillus; E=7e-27 embl:CAB88179.1; (AL352972) hypothetical protein SCC30.09c; E=1e-25 gb:AAF45006.1; AE003406_211 (AE003416) symbol=anon-35F36A; E=5e-23 COG: Cj0705; COG0327 Uncharacterized ACR; E=2e-16 PFAM: PF01784; Domain of unknown function DUF34; E=8.3e-47; hypothetical protein 6307680 1794281 RB11693 Rhodopirellula baltica SH 1 hypothetical protein NP_870115.1 6306775 R 243090 CDS NP_870116.1 32477122 1793748 complement(6307780..6308550) 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: swissprot:Q04737; Y751_SYNY3 HYPOTHETICAL 27.8 KD PROTEIN SLR0751; E=0.29 ddbj:BAA76764.1; (AB023137) KIAA0920 protein [Homo sapiens]; E=0.73; hypothetical protein 6308550 1793748 RB11698 Rhodopirellula baltica SH 1 hypothetical protein NP_870116.1 6307780 R 243090 CDS NP_870117.1 32477123 1790339 6308278..6310983 1 NC_005027.1 TPR repeat-containing protein 6310983 1790339 RB11701 Rhodopirellula baltica SH 1 TPR repeat-containing protein NP_870117.1 6308278 D 243090 CDS NP_870118.1 32477124 1792500 6311093..6311251 1 NC_005027.1 hypothetical protein 6311251 1792500 RB11703 Rhodopirellula baltica SH 1 hypothetical protein NP_870118.1 6311093 D 243090 CDS NP_870119.1 32477125 1794144 6311224..6311406 1 NC_005027.1 hypothetical protein 6311406 1794144 RB11704 Rhodopirellula baltica SH 1 hypothetical protein NP_870119.1 6311224 D 243090 CDS NP_870120.1 32477126 1791688 6311407..6312933 1 NC_005027.1 PMID: 3057437 best DB hits: BLAST: pir:F72359; periplasmic serine proteinase Do (EC 3.4.21.-) -; E=9e-41 pir:F81329; serine proteinase (proteinase DO) (EC 3.4.21.-) Cj1228c; E=2e-40 embl:CAA57948.1; (X82628) serine protease [Campylobacter jejuni]; E=2e-40 COG: TM0571; COG0265 Trypsin-like serine proteases, typically; E=8e-42 CT823; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=2e-40 PA0766; COG0265 Trypsin-like serine proteases, typically; E=5e-40 PFAM: PF00089; Trypsin; E=3.8e-20 PF00595; PDZ domain (Also known as DHR or GLG; E=4.9e-06; periplasmic serine proteinase Do 6312933 1791688 RB11706 Rhodopirellula baltica SH 1 periplasmic serine proteinase Do NP_870120.1 6311407 D 243090 CDS NP_870121.1 32477127 1795218 6312937..6313188 1 NC_005027.1 hypothetical protein 6313188 1795218 RB11707 Rhodopirellula baltica SH 1 hypothetical protein NP_870121.1 6312937 D 243090 CDS NP_870122.1 32477128 1796832 6313240..6313833 1 NC_005027.1 PMID: 10360571 best DB hits: BLAST: pir:C72318; hypothetical protein - Thermotoga maritima (strain MSB8); E=7e-04; hypothetical protein 6313833 1796832 RB11708 Rhodopirellula baltica SH 1 hypothetical protein NP_870122.1 6313240 D 243090 CDS NP_870123.1 32477129 1795489 6313833..6315776 1 NC_005027.1 PMID: 7908117 best DB hits: BLAST: pir:C72027; swisnf family helicase_2 - Chlamydophila pneumoniae; E=1e-50 gb:AAC71234.1; (U39681) ATP-dependent RNA helicase, ; E=4e-50 ddbj:BAA99057.1; (AP002548) SWISNF family helicase_2; E=5e-50 COG: CPn0849; COG0553 Superfamily II DNA/RNA helicases, SNF2 family; E=1e-51 PFAM: PF01102; Glycophorin A; E=0.41 PF00176; SNF2 and others N-terminal doma; E=6.4e-34 PF00271; Helicase conserved C-terminal d; E=1e-17; SWF/SNF family helicase 6315776 1795489 RB11712 Rhodopirellula baltica SH 1 SWF/SNF family helicase NP_870123.1 6313833 D 243090 CDS NP_870124.1 32477130 1790690 complement(6315714..6315938) 1 NC_005027.1 hypothetical protein 6315938 1790690 RB11716 Rhodopirellula baltica SH 1 hypothetical protein NP_870124.1 6315714 R 243090 CDS NP_870125.1 32477131 1792470 complement(6315877..6316194) 1 NC_005027.1 hypothetical protein 6316194 1792470 RB11718 Rhodopirellula baltica SH 1 hypothetical protein NP_870125.1 6315877 R 243090 CDS NP_870126.1 32477132 1794159 6316234..6317028 1 NC_005027.1 hypothetical protein 6317028 1794159 RB11720 Rhodopirellula baltica SH 1 hypothetical protein NP_870126.1 6316234 D 243090 CDS NP_870127.1 32477133 1794875 6317037..6318065 1 NC_005027.1 PMID: 9734811 PMID: 95299934 PMID: 9262406 best DB hits: BLAST: ddbj:BAA31647.1; (AB014572) KIAA0672 protein [Homo sapiens]; E=0.007 pir:T12533; hypothetical protein DKFZp434B034.1 - human (fragment); E=0.010; hypothetical protein 6318065 1794875 RB11722 Rhodopirellula baltica SH 1 hypothetical protein NP_870127.1 6317037 D 243090 CDS NP_870128.1 32477134 1795659 6318144..6318821 1 NC_005027.1 hypothetical protein 6318821 1795659 RB11726 Rhodopirellula baltica SH 1 hypothetical protein NP_870128.1 6318144 D 243090 CDS NP_870129.1 32477135 1790294 6318857..6319744 1 NC_005027.1 PMID: 8905231 PMID: 10561547 best DB hits: BLAST: swissprot:P73599; YD04_SYNY3 HYPOTHETICAL 32.8 KDA PROTEIN SLL1304; E=1e-25 swissprot:O50580; DT3E_PSECI D-TAGATOSE 3-EPIMERASE -----; E=2e-25 swissprot:Q9WYP7; Y416_THEMA HYPOTHETICAL PROTEIN TM0416 -----; E=3e-14 COG: sll1304; COG1082 Predicted endonucleases; E=1e-26; tagatose 3-epimerase 6319744 1790294 RB11728 Rhodopirellula baltica SH 1 tagatose 3-epimerase NP_870129.1 6318857 D 243090 CDS NP_870130.1 32477136 1790785 complement(6319752..6320009) 1 NC_005027.1 hypothetical protein 6320009 1790785 RB11729 Rhodopirellula baltica SH 1 hypothetical protein NP_870130.1 6319752 R 243090 CDS NP_870131.1 32477137 1793357 6320023..6320817 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:F83604; hypothetical protein PA0339 [imported] - Pseudomonas; E=1e-10 ddbj:BAB05446.1; (AP001512) BH1727~unknown conserved protein in; E=5e-08 swissprot:P54797; T10_MOUSE SERTHR-RICH PROTEIN T10 IN DGCR; E=6e-07 COG: PA0339; COG3332 Uncharacterized ACR; E=1e-11; hypothetical protein 6320817 1793357 RB11730 Rhodopirellula baltica SH 1 hypothetical protein NP_870131.1 6320023 D 243090 CDS NP_870132.1 32477138 1790425 complement(6320896..6321063) 1 NC_005027.1 hypothetical protein 6321063 1790425 RB11731 Rhodopirellula baltica SH 1 hypothetical protein NP_870132.1 6320896 R 243090 CDS NP_870133.1 32477139 1792475 complement(6321170..6321625) 1 NC_005027.1 hypothetical protein 6321625 1792475 RB11732 Rhodopirellula baltica SH 1 hypothetical protein NP_870133.1 6321170 R 243090 CDS NP_870134.1 32477140 1794640 6321668..6322957 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein 6322957 1794640 RB11736 Rhodopirellula baltica SH 1 hypothetical protein NP_870134.1 6321668 D 243090 CDS NP_870135.1 32477141 1790264 complement(6322967..6323086) 1 NC_005027.1 hypothetical protein 6323086 1790264 RB11738 Rhodopirellula baltica SH 1 hypothetical protein NP_870135.1 6322967 R 243090 CDS NP_870136.1 32477142 1794234 6323080..6323274 1 NC_005027.1 hypothetical protein 6323274 1794234 RB11739 Rhodopirellula baltica SH 1 hypothetical protein NP_870136.1 6323080 D 243090 CDS NP_870137.1 32477143 1793463 6323302..6326160 1 NC_005027.1 best DB hits: PFAM: PF02030; Hypothetical mycoplasma lipopro; E=0.82; signal peptide 6326160 1793463 RB11742 Rhodopirellula baltica SH 1 signal peptide NP_870137.1 6323302 D 243090 CDS NP_870138.1 32477144 1794318 6326162..6327673 1 NC_005027.1 sulfatase 6327673 1794318 RB11746 Rhodopirellula baltica SH 1 sulfatase NP_870138.1 6326162 D 243090 CDS NP_870139.1 32477145 1790366 6327844..6328017 1 NC_005027.1 hypothetical protein 6328017 1790366 RB11748 Rhodopirellula baltica SH 1 hypothetical protein NP_870139.1 6327844 D 243090 CDS NP_870140.1 32477146 1794282 6328064..6328354 1 NC_005027.1 PMID: 2824781 best DB hits: BLAST: gb:AAG58100.1; AE005527_3 (AE005527) unknown protein encoded by; E=0.002 gb:AAG53987.1; AF327445_1 (AF327445) transposase A; E=0.003 gb:AAF28119.1; AF153317_15 (AF153317) InsA [Shigella; E=0.007 COG: PA1937; COG2963 Transposase; E=0.004 PFAM: PF01381; Helix-turn-helix; E=0.53 PF01527; Transposase; E=6.1e-18; transposase A 6328354 1794282 RB11749 Rhodopirellula baltica SH 1 transposase A NP_870140.1 6328064 D 243090 CDS NP_870141.1 32477147 1794205 6328357..6329235 1 NC_005027.1 PMID: 1482189 PMID: 11337471 PMID: 1482192 best DB hits: BLAST: gb:AAA88919.1; (U13013) ORFB [Leptospira interrogans]; E=3e-47 gb:AAA88916.1; (U13012) ORFB [Leptospira interrogans]; E=1e-46 gb:AAC05649.1; (AF038931) probable transposase-related protein; E=1e-45 COG: DRB0019.2; COG2801 transposase; E=1e-35 PFAM: PF00665; Integrase core domain; E=4.8e-40; transposase 6329235 1794205 RB11750 Rhodopirellula baltica SH 1 transposase NP_870141.1 6328357 D 243090 CDS NP_870142.1 32477148 1792176 6329316..6329819 1 NC_005027.1 hypothetical protein 6329819 1792176 RB11751 Rhodopirellula baltica SH 1 hypothetical protein NP_870142.1 6329316 D 243090 CDS NP_870143.1 32477149 1791352 complement(6329394..6329918) 1 NC_005027.1 hypothetical protein 6329918 1791352 RB11752 Rhodopirellula baltica SH 1 hypothetical protein NP_870143.1 6329394 R 243090 CDS NP_870144.1 32477150 1792724 complement(6329915..6330736) 1 NC_005027.1 PMID: 9440525 best DB hits: BLAST: swissprot:P36999; RRMA_ECOLI RIBOSOMAL RNA LARGE SUBUNIT; E=2e-21 gb:AAG56811.1; AE005405_2 (AE005405) enzyme [Escherichia; E=1e-20 pir:F83500; rRNA methyltransferase PA1161 [imported] - Pseudomonas; E=4e-20 COG: rrmA; COG0500 SAM-dependent methyltransferases; E=2e-22; ribosomal RNA large subunit methyltransferase A 6330736 rrmA 1792724 rrmA Rhodopirellula baltica SH 1 ribosomal RNA large subunit methyltransferase A NP_870144.1 6329915 R 243090 CDS NP_870145.1 32477151 1792477 6330717..6330992 1 NC_005027.1 hypothetical protein 6330992 1792477 RB11757 Rhodopirellula baltica SH 1 hypothetical protein NP_870145.1 6330717 D 243090 CDS NP_870146.1 32477152 1793552 complement(6330939..6331238) 1 NC_005027.1 hypothetical protein 6331238 1793552 RB11758 Rhodopirellula baltica SH 1 hypothetical protein NP_870146.1 6330939 R 243090 CDS NP_870147.1 32477153 1793424 complement(6331315..6331512) 1 NC_005027.1 hypothetical protein 6331512 1793424 RB11759 Rhodopirellula baltica SH 1 hypothetical protein NP_870147.1 6331315 R 243090 CDS NP_870148.1 32477154 1790985 6331527..6331922 1 NC_005027.1 hypothetical protein 6331922 1790985 RB11760 Rhodopirellula baltica SH 1 hypothetical protein NP_870148.1 6331527 D 243090 CDS NP_870149.1 32477155 1792996 complement(6331874..6333352) 1 NC_005027.1 PMID: 1654502 best DB hits: BLAST: swissprot:P09400; STRI_STRGR STREPTOMYCIN BIOSYNTHESIS PROTEIN; E=7e-09 ddbj:BAB05939.1; (AP001514) dehydrogenase [Bacillus halodurans]; E=5e-06 swissprot:P40332; YISS_BACSU HYPOTHETICAL 37.5 KD PROTEIN IN; E=0.014 COG: BH2220; COG0673 Predicted dehydrogenases and related proteins; E=4e-07 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=1.4e-05; streptomycin biosynthesis protein strI 6333352 strI 1792996 strI Rhodopirellula baltica SH 1 streptomycin biosynthesis protein strI NP_870149.1 6331874 R 243090 CDS NP_870150.1 32477156 1794552 6333558..6334091 1 NC_005027.1 hypothetical protein 6334091 1794552 RB11765 Rhodopirellula baltica SH 1 hypothetical protein NP_870150.1 6333558 D 243090 CDS NP_870151.1 32477157 1792839 6334355..6334744 1 NC_005027.1 hypothetical protein 6334744 1792839 RB11766 Rhodopirellula baltica SH 1 hypothetical protein NP_870151.1 6334355 D 243090 CDS NP_870152.1 32477158 1792581 6334763..6334939 1 NC_005027.1 hypothetical protein 6334939 1792581 RB11767 Rhodopirellula baltica SH 1 hypothetical protein NP_870152.1 6334763 D 243090 CDS NP_870153.1 32477159 1789991 6334808..6334939 1 NC_005027.1 hypothetical protein 6334939 1789991 RB11768 Rhodopirellula baltica SH 1 hypothetical protein NP_870153.1 6334808 D 243090 CDS NP_870154.1 32477160 1791353 6335006..6359527 1 NC_005027.1 PMID: 98010624 best DB hits: BLAST: pir:T08615; aggregation factor core protein MAFp3, isoform C -; E=1e-12 pir:T08617; aggregation factor core protein MAFp3, isoform E -; E=4e-12 pir:T08614; aggregation factor core protein MAFp3, isoform B -; E=5e-08 PFAM: PF00028; Cadherin domain; E=1.6e-12; aggregation factor core protein MAFp3, isoform C 6359527 1791353 RB11769 Rhodopirellula baltica SH 1 aggregation factor core protein MAFp3, isoform C NP_870154.1 6335006 D 243090 CDS NP_870155.1 32477161 1795929 6359561..6360256 1 NC_005027.1 signal peptide 6360256 1795929 RB11796 Rhodopirellula baltica SH 1 signal peptide NP_870155.1 6359561 D 243090 CDS NP_870156.1 32477162 1794954 6360319..6360450 1 NC_005027.1 hypothetical protein 6360450 1794954 RB11798 Rhodopirellula baltica SH 1 hypothetical protein NP_870156.1 6360319 D 243090 CDS NP_870157.1 32477163 1795346 6360641..6361474 1 NC_005027.1 PMID: 9739094 PMID: 1625703 PMID: 10567266 best DB hits: BLAST: pir:B75578; zinc metalloendopeptidase, leishmanolysin family -; E=8e-12 gb:AAB97895.1; (AF037165) major surface glycoprotein [Leishmania; E=0.007 gb:AAB97896.1; (AF037166) major surface glycoprotein [Leishmania; E=0.007 PFAM: PF01457; Leishmanolysin; E=0.063; zinc metalloendopeptidase 6361474 1795346 RB11799 Rhodopirellula baltica SH 1 zinc metalloendopeptidase NP_870157.1 6360641 D 243090 CDS NP_870158.1 32477164 1794292 6361471..6361782 1 NC_005027.1 hypothetical protein 6361782 1794292 RB11801 Rhodopirellula baltica SH 1 hypothetical protein NP_870158.1 6361471 D 243090 CDS NP_870159.1 32477165 1791105 6361950..6362240 1 NC_005027.1 PMID: 2824781 best DB hits: BLAST: gb:AAG58100.1; AE005527_3 (AE005527) unknown protein encoded by; E=0.002 gb:AAG53987.1; AF327445_1 (AF327445) transposase A; E=0.003 gb:AAF28119.1; AF153317_15 (AF153317) InsA [Shigella; E=0.007 COG: PA1937; COG2963 Transposase; E=0.004 PFAM: PF01381; Helix-turn-helix; E=0.53 PF01527; Transposase; E=6.1e-18; transposase A 6362240 1791105 RB11802 Rhodopirellula baltica SH 1 transposase A NP_870159.1 6361950 D 243090 CDS NP_870160.1 32477166 1796823 6362243..6363121 1 NC_005027.1 PMID: 1482189 PMID: 11337471 PMID: 1482192 best DB hits: BLAST: gb:AAA88919.1; (U13013) ORFB [Leptospira interrogans]; E=3e-47 gb:AAA88916.1; (U13012) ORFB [Leptospira interrogans]; E=1e-46 gb:AAC05649.1; (AF038931) probable transposase-related protein; E=1e-45 COG: DRB0019.2; COG2801 transposase; E=1e-35 PFAM: PF00665; Integrase core domain; E=4.8e-40; transposase 6363121 1796823 RB11803 Rhodopirellula baltica SH 1 transposase NP_870160.1 6362243 D 243090 CDS NP_870161.1 32477167 1795893 complement(6363139..6363537) 1 NC_005027.1 hypothetical protein 6363537 1795893 RB11804 Rhodopirellula baltica SH 1 hypothetical protein NP_870161.1 6363139 R 243090 CDS NP_870162.1 32477168 1792363 complement(6363530..6363715) 1 NC_005027.1 hypothetical protein 6363715 1792363 RB11805 Rhodopirellula baltica SH 1 hypothetical protein NP_870162.1 6363530 R 243090 CDS NP_870163.1 32477169 1793916 6363652..6364356 1 NC_005027.1 signal peptide 6364356 1793916 RB11807 Rhodopirellula baltica SH 1 signal peptide NP_870163.1 6363652 D 243090 CDS NP_870164.1 32477170 1793243 complement(6364437..6364685) 1 NC_005027.1 hypothetical protein 6364685 1793243 RB11810 Rhodopirellula baltica SH 1 hypothetical protein NP_870164.1 6364437 R 243090 CDS NP_870165.1 32477171 1793722 6364750..6365883 1 NC_005027.1 PMID: 20365717 best DB hits: BLAST: pir:E83347; hypothetical protein PA2395 [imported] - Pseudomonas; E=2e-20 pir:E82768; conserved hypothetical protein XF0752 [imported] -; E=5e-20 pir:A82381; conserved hypothetical protein VCA1077 [imported] -; E=2e-14 COG: PA2395; COG1262 Uncharacterized BCR; E=2e-21; hypothetical protein 6365883 1793722 RB11811 Rhodopirellula baltica SH 1 hypothetical protein NP_870165.1 6364750 D 243090 CDS NP_870166.1 32477172 1790439 6365918..6366334 1 NC_005027.1 hypothetical protein 6366334 1790439 RB11812 Rhodopirellula baltica SH 1 hypothetical protein NP_870166.1 6365918 D 243090 CDS NP_870167.1 32477173 1796908 6366331..6366573 1 NC_005027.1 hypothetical protein 6366573 1796908 RB11813 Rhodopirellula baltica SH 1 hypothetical protein NP_870167.1 6366331 D 243090 CDS NP_870168.1 32477174 1793617 6366592..6366729 1 NC_005027.1 hypothetical protein 6366729 1793617 RB11816 Rhodopirellula baltica SH 1 hypothetical protein NP_870168.1 6366592 D 243090 CDS NP_870169.1 32477175 1791213 complement(6366714..6369527) 1 NC_005027.1 PMID: 3129532 PMID: 2507870 PMID: 8160014 best DB hits: BLAST: swissprot:P21458; SP3E_BACSU STAGE III SPORULATION PROTEIN E; E=1e-108 pir:C69999; DNA translocase stage III sporulation homolog ytpT -; E=1e-106 swissprot:P45264; FTSK_HAEIN CELL DIVISION PROTEIN FTSK HOMOLOG; E=1e-105 COG: BS_spoIIIE; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related; E=1e-109 ftsK; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; E=6e-97 CT739; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related; E=6e-97 PFAM: PF01580; FtsK/SpoIIIE family; E=9.7e-66; stage III sporulation protein E 6369527 spoIIIE 1791213 spoIIIE Rhodopirellula baltica SH 1 stage III sporulation protein E NP_870169.1 6366714 R 243090 CDS NP_870170.1 32477176 1795246 6369826..6371445 1 NC_005027.1 PMID: 9537320 best DB hits: BLAST: swissprot:O67820; IMDH_AQUAE INOSINE-5'-MONOPHOSPHATE; E=1e-144 ddbj:BAB03739.1; (AP001507) inositol-monophosphate dehydrogenase; E=1e-140 pir:JC7305; IMP dehydrogenase (EC 1.1.1.205) - Bacillus cereus; E=1e-134 COG: Ta0219; COG0516 IMP dehydrogenase/GMP reductase; E=1e-112 PFAM: PF01574; IMP dehydrogenase / GMP reduc; E=4.3e-49 PF00571; CBS domain; E=2.5e-08 PF01070; FMN-dependent dehydrogenase; E=0.00039; inosine-5'-monophosphate dehydrogenase 6371445 guaB 1795246 guaB Rhodopirellula baltica SH 1 inosine-5'-monophosphate dehydrogenase NP_870170.1 6369826 D 243090 CDS NP_870171.1 32477177 1791216 6371378..6373282 1 NC_005027.1 signal peptide 6373282 1791216 RB11823 Rhodopirellula baltica SH 1 signal peptide NP_870171.1 6371378 D 243090 CDS NP_870172.1 32477178 1794561 6373298..6373600 1 NC_005027.1 hypothetical protein 6373600 1794561 RB11826 Rhodopirellula baltica SH 1 hypothetical protein NP_870172.1 6373298 D 243090 CDS NP_870173.1 32477179 1791840 6373669..6373818 1 NC_005027.1 hypothetical protein 6373818 1791840 RB11827 Rhodopirellula baltica SH 1 hypothetical protein NP_870173.1 6373669 D 243090 CDS NP_870174.1 32477180 1794042 6373827..6375767 1 NC_005027.1 best DB hits: BLAST: gb:AAF51529.1; (AE003590) CG18326 gene product [Drosophila; E=0.32; transmembrane protein 6375767 1794042 RB11828 Rhodopirellula baltica SH 1 transmembrane protein NP_870174.1 6373827 D 243090 CDS NP_870175.1 32477181 1792262 complement(6375848..6376720) 1 NC_005027.1 hypothetical protein 6376720 1792262 RB11831 Rhodopirellula baltica SH 1 hypothetical protein NP_870175.1 6375848 R 243090 CDS NP_870176.1 32477182 1796861 complement(6376760..6377218) 1 NC_005027.1 PMID: 9371463 PMID: 12001234 best DB hits: BLAST: gb:AAB90470.1; (AE001051) nucleoside diphosphate kinase (ndk); E=1e-36 swissprot:O26358; NDK_METTH NUCLEOSIDE DIPHOSPHATE KINASE (NDK); E=1e-35 pir:D75044; nucleoside diphosphate kinase (ndk) PAB1489 - Pyrococcus; E=2e-35 COG: AF0767; COG0105 Nucleoside diphosphate kinase; E=1e-37 PFAM: PF00334; Nucleoside diphosphate kinases; E=3.4e-61; nucleoside diphosphate kinase (NDK) 6377218 ndk 1796861 ndk Rhodopirellula baltica SH 1 nucleoside diphosphate kinase (NDK) NP_870176.1 6376760 R 243090 CDS NP_870177.1 32477183 1792882 complement(6377295..6377732) 1 NC_005027.1 signal peptide 6377732 1792882 RB11837 Rhodopirellula baltica SH 1 signal peptide NP_870177.1 6377295 R 243090 CDS NP_870178.1 32477184 1792306 complement(6377722..6378222) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:A83254; hypothetical protein PA3130 [imported] - Pseudomonas; E=5e-08 swissprot:P77712; YBAW_ECOLI HYPOTHETICAL 15.1 KD PROTEIN IN; E=0.43 gb:AAG54793.1; AE005223_8 (AE005223) orf, hypothetical protein; E=0.46 COG: PA3130; COG0824 Predicted thioesterase; E=5e-09; hypothetical protein 6378222 1792306 RB11839 Rhodopirellula baltica SH 1 hypothetical protein NP_870178.1 6377722 R 243090 CDS NP_870179.1 32477185 1793440 complement(6378311..6378565) 1 NC_005027.1 best DB hits: BLAST: pir:T16283; hypothetical protein F35H10.10 - Caenorhabditis elegans; E=0.58 gb:AAB51198.1; (U70870) CELF35-1 [Caenorhabditis elegans]; E=0.58; hypothetical protein 6378565 1793440 RB11843 Rhodopirellula baltica SH 1 hypothetical protein NP_870179.1 6378311 R 243090 CDS NP_870180.1 32477186 1794216 6378510..6378794 1 NC_005027.1 hypothetical protein 6378794 1794216 RB11844 Rhodopirellula baltica SH 1 hypothetical protein NP_870180.1 6378510 D 243090 CDS NP_870181.1 32477187 1790183 complement(6378812..6379072) 1 NC_005027.1 hypothetical protein 6379072 1790183 RB11845 Rhodopirellula baltica SH 1 hypothetical protein NP_870181.1 6378812 R 243090 CDS NP_870182.1 32477188 1794705 complement(6379060..6379323) 1 NC_005027.1 hypothetical protein 6379323 1794705 RB11846 Rhodopirellula baltica SH 1 hypothetical protein NP_870182.1 6379060 R 243090 CDS NP_870183.1 32477189 1794193 6379337..6380068 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: swissprot:Q9RTB6; MSRA_DEIRA PEPTIDE METHIONINE SULFOXIDE; E=3e-53 embl:CAC23591.1; (AL512971) peptide methionine sulfoxide; E=3e-45 gb:AAG19555.1; (AE005045) peptide methionine sulfoxide reductase; E=5e-43 COG: DR1849; COG0225 Peptide methionine sulfoxide reductase; E=3e-54 PFAM: PF01625; Peptide methionine sulfoxide reducta; E=5.8e-84; peptide methionine sulfoxide reductase 6380068 msrA 1794193 msrA Rhodopirellula baltica SH 1 peptide methionine sulfoxide reductase NP_870183.1 6379337 D 243090 CDS NP_870184.1 32477190 1793742 6380126..6381418 1 NC_005027.1 hypothetical protein 6381418 1793742 RB11848 Rhodopirellula baltica SH 1 hypothetical protein NP_870184.1 6380126 D 243090 CDS NP_870185.1 32477191 1795328 6381415..6382455 1 NC_005027.1 PMID: 1640836 PMID: 93174466 best DB hits: BLAST: gb:AAC70103.1; (AF074613) type II secretion protein [Escherichia; E=3e-15 pir:C82327; MSHA biogenesis protein MshG VC0406 [imported] - Vibrio; E=9e-15 gb:AAA96018.1; (U35009) MshG [Vibrio cholerae]; E=3e-13 COG: VC0406; COG1459 General secretory pathway protein F; E=8e-16 PFAM: PF00482; Bacterial type II secretion system p; E=3.4e-05; general secretion pathway protein F 6382455 hofF 1795328 hofF Rhodopirellula baltica SH 1 general secretion pathway protein F NP_870185.1 6381415 D 243090 CDS NP_870186.1 32477192 1793560 6382501..6383190 1 NC_005027.1 PMID: 1551827 PMID: 95352066 best DB hits: BLAST: swissprot:P19465; GCH1_BACSU GTP CYCLOHYDROLASE I (GTP-CH-I); E=1e-59 ddbj:BAB05365.1; (AP001512) GTP cyclohydrolase I [Bacillus; E=1e-57 swissprot:O06273; GCH1_MYCTU GTP CYCLOHYDROLASE I (GTP-CH-I); E=4e-53 COG: BS_mtrA; COG0302 GTP cyclohydrolase I; E=1e-60 PFAM: PF01227; GTP cyclohydrolase I; E=2.3e-110; GTP cyclohydrolase I 6383190 folE 1793560 folE Rhodopirellula baltica SH 1 GTP cyclohydrolase I NP_870186.1 6382501 D 243090 CDS NP_870187.1 32477193 1795488 complement(6383171..6383404) 1 NC_005027.1 hypothetical protein 6383404 1795488 RB11854 Rhodopirellula baltica SH 1 hypothetical protein NP_870187.1 6383171 R 243090 CDS NP_870188.1 32477194 1794354 complement(6383460..6383765) 1 NC_005027.1 hypothetical protein 6383765 1794354 RB11855 Rhodopirellula baltica SH 1 hypothetical protein NP_870188.1 6383460 R 243090 CDS NP_870189.1 32477195 1791577 complement(6383865..6385799) 1 NC_005027.1 PMID: 7934828 best DB hits: BLAST: swissprot:P39599; YWCA_BACSU HYPOTHETICAL 55.0 KD PROTEIN IN; E=3e-34 pir:F83241; probable sodium:solute symporter PA3234 [imported] -; E=1e-33 gb:AAK01502.1; (AF241171) amino acid transport protein; E=3e-32 COG: BS_ywcA; COG0591 Na+/proline, Na+/panthothenate symporters and; E=3e-35 yjcG; COG0591 Na+/proline, Na+/panthothenate symporters and related; E=7e-33 XF2251; COG0591 Na+/proline, Na+/panthothenate symporters and; E=2e-30 PFAM: PF00474; Sodium:solute symporter famil; E=3.8e-37; symporter ywcA 6385799 1791577 RB11856 Rhodopirellula baltica SH 1 symporter ywcA NP_870189.1 6383865 R 243090 CDS NP_870190.1 32477196 1793470 complement(6385796..6386101) 1 NC_005027.1 hypothetical protein 6386101 1793470 RB11857 Rhodopirellula baltica SH 1 hypothetical protein NP_870190.1 6385796 R 243090 CDS NP_870191.1 32477197 1790858 complement(6386309..6387160) 1 NC_005027.1 PMID: 9403685 PMID: 1840580 best DB hits: BLAST: pir:D70166; phnP protein (phnP) homolog - Lyme disease spirochete; E=3e-47 pir:E71649; hypothetical protein RP869 - Rickettsia prowazekii; E=2e-35 ddbj:BAB02903.1; (AB028610) hydrolase-like protein [Arabidopsis; E=1e-31 COG: BB0533; COG1235 Metal-dependent hydrolases of the beta-lactamase; E=2e-48 PFAM: PF00753; Metallo-beta-lactamase superfamil; E=1.1e-06; phnP protein homolog- hydrolase 6387160 phnP 1790858 phnP Rhodopirellula baltica SH 1 phnP protein homolog- hydrolase NP_870191.1 6386309 R 243090 CDS NP_870192.1 32477198 1791271 complement(6387157..6387327) 1 NC_005027.1 hypothetical protein 6387327 1791271 RB11862 Rhodopirellula baltica SH 1 hypothetical protein NP_870192.1 6387157 R 243090 CDS NP_870193.1 32477199 1794458 complement(6387411..6388538) 1 NC_005027.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 6388538 recA 1794458 recA Rhodopirellula baltica SH 1 recombinase A NP_870193.1 6387411 R 243090 CDS NP_870194.1 32477200 1791597 6388765..6388905 1 NC_005027.1 hypothetical protein 6388905 1791597 RB11867 Rhodopirellula baltica SH 1 hypothetical protein NP_870194.1 6388765 D 243090 CDS NP_870195.1 32477201 1796841 complement(6388940..6389680) 1 NC_005027.1 hypothetical protein 6389680 1796841 RB11868 Rhodopirellula baltica SH 1 hypothetical protein NP_870195.1 6388940 R 243090 CDS NP_870196.1 32477202 1793496 complement(6389743..6389886) 1 NC_005027.1 hypothetical protein 6389886 1793496 RB11869 Rhodopirellula baltica SH 1 hypothetical protein NP_870196.1 6389743 R 243090 CDS NP_870197.1 32477203 1793437 6389978..6391042 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:F83601; hypothetical protein PA0356 [imported] - Pseudomonas; E=3e-15 pir:H82508; conserved hypothetical protein VCA0034 [imported] -; E=3e-11 pir:G72324; hypothetical protein - Thermotoga maritima (strain MSB8); E=1e-10 COG: PA0356; COG1639 Uncharacterized BCR; E=3e-16; hypothetical protein 6391042 1793437 RB11870 Rhodopirellula baltica SH 1 hypothetical protein NP_870197.1 6389978 D 243090 CDS NP_870198.1 32477204 1790127 6391049..6392338 1 NC_005027.1 hypothetical protein 6392338 1790127 RB11875 Rhodopirellula baltica SH 1 hypothetical protein NP_870198.1 6391049 D 243090 CDS NP_870199.1 32477205 1792519 6392375..6395116 1 NC_005027.1 PMID: 7628442 PMID: 7542800 best DB hits: BLAST: pir:H72034; thiol-disulfide interchange protein dsbD [imported] -; E=7e-48 pir:G81503; thiol-disulfide interchange protein DSbD homolog CP1086; E=7e-48 pir:C81653; probable thiol-disulfide interchange protein dsbD; E=8e-47 COG: CPn0786; COG0526 Thiol-disulfide isomerase and thioredoxins; E=6e-49 BH1194; COG0785 Cytochrome c biogenesis protein; E=0.002; thiol:disulfide interchange protein DsbD 6395116 dsbB 1792519 dsbB Rhodopirellula baltica SH 1 thiol:disulfide interchange protein DsbD NP_870199.1 6392375 D 243090 CDS NP_870200.1 32477206 1796906 6395113..6396510 1 NC_005027.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 6396510 trmE 1796906 trmE Rhodopirellula baltica SH 1 tRNA modification GTPase TrmE NP_870200.1 6395113 D 243090 CDS NP_870201.1 32477207 1790982 6396598..6397104 1 NC_005027.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 6397104 msrA 1790982 msrA Rhodopirellula baltica SH 1 methionine sulfoxide reductase A NP_870201.1 6396598 D 243090 CDS NP_870202.1 32477208 1790253 complement(6397196..6398572) 1 NC_005027.1 PMID: 3057437 PMID: 10761919 best DB hits: BLAST: pir:B81914; probable periplasmic serine proteinase (EC 3.4.21.-); E=2e-47 gb:AAK01318.1; (AF190580) MucD [Pseudomonas syringae pv.; E=8e-47 pir:F83550; serine proteinase MucD precursor PA0766 [imported] -; E=1e-46 COG: NMB0532; COG0265 Trypsin-like serine proteases, typically; E=6e-48 RP124; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=7e-45 CPn0979; COG0265 Trypsin-like serine proteases, typically; E=3e-44 PFAM: PF00089; Trypsin; E=1.9e-16 PF00595; PDZ domain (Also known as DHR or GL; E=3.1e-09; periplasmic serine proteinase 6398572 1790253 RB11879 Rhodopirellula baltica SH 1 periplasmic serine proteinase NP_870202.1 6397196 R 243090 CDS NP_870203.1 32477209 1792509 6398667..6399167 1 NC_005027.1 PMID: 2526291 PMID: 8969508 PMID: 9384377 best DB hits: BLAST: pir:PC1224; cytidine deaminase (EC 3.5.4.5) - human (fragment); E=3e-25 gb:AAD15828.1; (AF061658) cytidine deaminase [Homo sapiens]; E=3e-25 embl:CAB51906.1; (AJ237978) cytidine deaminase [Bacillus; E=6e-25 COG: BS_cdd; COG0295 Cytidine deaminase; E=8e-26 PFAM: PF00383; Cytidine and deoxycytidylate de; E=1.3e-23; cytidine deaminase 6399167 cdd 1792509 cdd Rhodopirellula baltica SH 1 cytidine deaminase NP_870203.1 6398667 D 243090 CDS NP_870204.1 32477210 1794054 complement(6399411..6400817) 1 NC_005027.1 hypothetical protein 6400817 1794054 RB11884 Rhodopirellula baltica SH 1 hypothetical protein NP_870204.1 6399411 R 243090 CDS NP_870205.1 32477211 1791268 complement(6400881..6403682) 1 NC_005027.1 signal peptide 6403682 1791268 RB11886 Rhodopirellula baltica SH 1 signal peptide NP_870205.1 6400881 R 243090 CDS NP_870206.1 32477212 1793191 complement(6403762..6405420) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:G83561; hypothetical protein PA0670 [imported] - Pseudomonas; E=4e-07; hypothetical protein 6405420 1793191 RB11891 Rhodopirellula baltica SH 1 hypothetical protein NP_870206.1 6403762 R 243090 CDS NP_870207.1 32477213 1792960 complement(6405719..6407104) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:H83561; hypothetical protein PA0671 [imported] - Pseudomonas; E=5e-05; hypothetical protein 6407104 1792960 RB11894 Rhodopirellula baltica SH 1 hypothetical protein NP_870207.1 6405719 R 243090 CDS NP_870208.1 32477214 1794300 6407046..6407807 1 NC_005027.1 hypothetical protein 6407807 1794300 RB11897 Rhodopirellula baltica SH 1 hypothetical protein NP_870208.1 6407046 D 243090 CDS NP_870209.1 32477215 1796865 6407203..6407562 1 NC_005027.1 PMID: 11679669 best DB hits: PFAM: PF02370; M protein repeat; E=0.41; hypothetical protein 6407562 1796865 RB11898 Rhodopirellula baltica SH 1 hypothetical protein NP_870209.1 6407203 D 243090 CDS NP_870210.1 32477216 1790086 complement(6407547..6407867) 1 NC_005027.1 hypothetical protein 6407867 1790086 RB11900 Rhodopirellula baltica SH 1 hypothetical protein NP_870210.1 6407547 R 243090 CDS NP_870211.1 32477217 1795544 6407792..6408118 1 NC_005027.1 best DB hits: BLAST: swissprot:P49453; CENC_SHEEP CENTROMERE PROTEIN C (CENP-C); E=0.84; hypothetical protein 6408118 1795544 RB11902 Rhodopirellula baltica SH 1 hypothetical protein NP_870211.1 6407792 D 243090 CDS NP_870212.1 32477218 1793006 6408267..6409175 1 NC_005027.1 hypothetical protein 6409175 1793006 RB11904 Rhodopirellula baltica SH 1 hypothetical protein NP_870212.1 6408267 D 243090 CDS NP_870213.1 32477219 1795395 6409273..6409737 1 NC_005027.1 PMID: 11078650 best DB hits: BLAST: gb:AAF64052.1; AF242367_1 (AF242367) hypothetical; E=1e-10 embl:CAA63806.1; (X93605) hypothetical protein [Zymomonas; E=4e-08 pir:D72219; conserved hypothetical protein - Thermotoga maritima; E=5e-07 COG: TM1720; COG0454 Histone acetyltransferase HPA2 and related; E=4e-08 PFAM: PF00583; Acetyltransferase (GNAT) family; E=4.9e-11; acetyltransferase 6409737 1795395 RB11906 Rhodopirellula baltica SH 1 acetyltransferase NP_870213.1 6409273 D 243090 CDS NP_870214.1 32477220 1796877 6409724..6410200 1 NC_005027.1 best DB hits: BLAST: gb:AAF00629.1; AC009540_6 (AC009540) unknown protein [Arabidopsis; E=1e-04 gb:AAF61443.1; AF139187_1 (AF139187) root border cell-specific; E=5e-04 pir:E83098; hypothetical protein PA4388 [imported] - Pseudomonas; E=0.020 COG: PA4388; COG0748 Uncharacterized BCR; E=0.002; hypothetical protein 6410200 1796877 RB11907 Rhodopirellula baltica SH 1 hypothetical protein NP_870214.1 6409724 D 243090 CDS NP_870215.1 32477221 1795383 6410157..6410663 1 NC_005027.1 best DB hits: PFAM: PF01330; RuvA N terminal domain; E=0.83; hypothetical protein 6410663 1795383 RB11909 Rhodopirellula baltica SH 1 hypothetical protein NP_870215.1 6410157 D 243090 CDS NP_870216.1 32477222 1790166 6410718..6411734 1 NC_005027.1 PMID: 1657871 PMID: 10086841 best DB hits: BLAST: pir:H72289; hypothetical protein TM1132 - Thermotoga maritima; E=5e-70 ddbj:BAB04323.1; (AP001509) methanol dehydrogenase regulatory; E=4e-69 pir:S75782; methanol dehydrogenase regulatory protein -; E=3e-67 COG: TM1132; COG0714 MoxR-like ATPases; E=5e-71 PFAM: PF00004; ATPase associated with va; E=0.00074 PF01506; Hepatitis C virus non-structural; E=0.69 PF01078; Magnesium chelatase, subunit Chl; E=8.1e-11; methanol dehydrogenase regulatory protein 6411734 moxR 1790166 moxR Rhodopirellula baltica SH 1 methanol dehydrogenase regulatory protein NP_870216.1 6410718 D 243090 CDS NP_870217.1 32477223 1793779 6411706..6413076 1 NC_005027.1 best DB hits: BLAST: pir:A75012; conserved hypothetical protein PAB1277 - Pyrococcus; E=2e-04 pir:S75346; hypothetical protein slr2013 - Synechocystis sp. (strain; E=0.001 pir:H71125; hypothetical protein PH0774 - Pyrococcus horikoshii; E=0.014 COG: PAB1277; COG1721 Uncharacterized ACR; E=2e-05 PFAM: PF01882; Protein of unknown function DUF58; E=2e-08; hypothetical protein 6413076 1793779 RB11914 Rhodopirellula baltica SH 1 hypothetical protein NP_870217.1 6411706 D 243090 CDS NP_870218.1 32477224 1792069 6413073..6415331 1 NC_005027.1 PMID: 99009353 PMID: 10086841 best DB hits: BLAST: pir:F70464; hypothetical protein aq_1912 - Aquifex aeolicus -----; E=1e-13 ddbj:BAB04325.1; (AP001509) BH0606~unknown conserved protein; E=4e-10 pir:F83287; hypothetical protein PA2873 [imported] - Pseudomonas; E=3e-07 COG: aq_1912; COG1305 transglutaminases, cysteine; E=1e-14 PFAM: PF01841; Transglutaminase-like superfam; E=7e-11; protease 6415331 1792069 RB11916 Rhodopirellula baltica SH 1 protease NP_870218.1 6413073 D 243090 CDS NP_870219.1 32477225 1790729 complement(6415297..6415701) 1 NC_005027.1 best DB hits: BLAST: pir:E81162; conserved hypothetical protein NMB0742 [imported] -; E=0.034 pir:B81942; hypothetical protein NMA0955 [imported] - Neisseria; E=0.034 gb:AAG23848.1; (AF129396) unknown [Pseudomonas resinovorans]; E=0.11; hypothetical protein 6415701 1790729 RB11918 Rhodopirellula baltica SH 1 hypothetical protein NP_870219.1 6415297 R 243090 CDS NP_870220.1 32477226 1796836 complement(6415698..6417713) 1 NC_005027.1 PMID: 8325851 PMID: 7771772 best DB hits: BLAST: swissprot:P77596; YAGF_ECOLI HYPOTHETICAL 69.4 KD PROTEIN IN; E=0.0 swissprot:P39358; YJHG_ECOLI HYPOTHETICAL 70.0 KD PROTEIN IN; E=0.0 pir:S56522; hypothetical protein f655 - Escherichia coli -----; E=0.0 COG: yagF; COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; E=0.0 MJ1276; COG0129 Dihydroxyacid dehydratase/phosphogluconate; E=5e-48 ilvD; COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; E=2e-34 PFAM: PF00920; Dehydratase; E=3.6e-208; hypothetical protein 6417713 ilvD 1796836 ilvD Rhodopirellula baltica SH 1 hypothetical protein NP_870220.1 6415698 R 243090 CDS NP_870221.1 32477227 1790762 complement(6417694..6418443) 1 NC_005027.1 PMID: 10086841 best DB hits: BLAST: ddbj:BAB04716.1; (AP001510) BH0997~unknown conserved protein; E=2e-44 ddbj:BAB05396.1; (AP001512) BH1677~unknown conserved protein; E=2e-41 pir:F70011; hypothetical protein yugP - Bacillus subtilis -----; E=8e-39 COG: BH0997; COG2738 Predicted Zn-dependent protease; E=2e-45; Zn-dependent protease 6418443 1790762 RB11920 Rhodopirellula baltica SH 1 Zn-dependent protease NP_870221.1 6417694 R 243090 CDS NP_870222.1 32477228 1793199 complement(6418585..6419037) 1 NC_005027.1 PMID: 10086841 best DB hits: BLAST: ddbj:BAB06330.1; (AP001516) BH2611~unknown conserved protein; E=4e-08 pir:F69930; conserved hypothetical protein yozB - Bacillus subtilis; E=1e-07 swissprot:Q04453; YCT1_BACFI HYPOTHETICAL 21.0 KD PROTEIN IN CTAF; E=8e-07 COG: BH2611; COG2322 Predicted membrane protein; E=4e-09; hypothetical protein 6419037 1793199 RB11922 Rhodopirellula baltica SH 1 hypothetical protein NP_870222.1 6418585 R 243090 CDS NP_870223.1 32477229 1795392 complement(6419041..6419736) 1 NC_005027.1 PMID: 1944230 PMID: 7592491 best DB hits: BLAST: ddbj:BAB07054.1; (AP001518) BH3335~unknown conserved protein; E=6e-19 swissprot:P54178; YPMQ_BACSU HYPOTHETICAL 21.6 KDA PROTEIN IN ILVA; E=1e-12 ddbj:BAB06623.1; (AP001517) BH2904~unknown conserved protein; E=2e-12 COG: BH3335; COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in; E=6e-20 BH2868; COG0526 Thiol-disulfide isomerase and thioredoxins; E=1e-04 DR1886; COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in; E=2e-04 PFAM: PF02630; SCO1/SenC; E=1.7e-14; hypothetical protein 6419736 1795392 RB11923 Rhodopirellula baltica SH 1 hypothetical protein NP_870223.1 6419041 R 243090 CDS NP_870224.1 32477230 1792785 6419855..6420085 1 NC_005027.1 hypothetical protein 6420085 1792785 RB11925 Rhodopirellula baltica SH 1 hypothetical protein NP_870224.1 6419855 D 243090 CDS NP_870225.1 32477231 1794784 6420067..6421170 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:H70731; probable esterase - Mycobacterium tuberculosis (strain; E=2e-18 pir:B70961; probable esterase - Mycobacterium tuberculosis (strain; E=5e-18 pir:B75555; probable lipaseesterase - Deinococcus radiodurans; E=5e-16 COG: Rv2284; COG0657 Acetyl esterase; E=2e-19 APE2441; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; E=7e-05 BS_pnbA; COG2272 Carboxylesterase type B; E=1e-04; lipase/esterase 6421170 1794784 RB11927 Rhodopirellula baltica SH 1 lipase/esterase NP_870225.1 6420067 D 243090 CDS NP_870226.1 32477232 1793481 complement(6421182..6422414) 1 NC_005027.1 hypothetical protein 6422414 1793481 RB11928 Rhodopirellula baltica SH 1 hypothetical protein NP_870226.1 6421182 R 243090 CDS NP_870227.1 32477233 1790369 complement(6422447..6423328) 1 NC_005027.1 PMID: 9371463 PMID: 1924314 best DB hits: BLAST: pir:B69012; probable membrane protein MTH1092 - Methanobacterium; E=7e-22 gb:AAB89369.1; (AE000972) daunorubicin resistance membrane; E=5e-14 pir:D75108; daunorubicin resistance membrane protein (drrb) PAB1924; E=9e-14 COG: MTH1092; COG0842 Permease component of an ABC-transporter; E=6e-23; hypothetical protein 6423328 1790369 RB11929 Rhodopirellula baltica SH 1 hypothetical protein NP_870227.1 6422447 R 243090 CDS NP_870228.1 32477234 1795868 complement(6423325..6424299) 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAC08315.1; (AL392149) ABC transport system; E=7e-48 pir:C69012; ABC transporter (ATP-binding, daunorubicin resistance) -; E=7e-44 pir:S32908; hypothetical protein 4 - Streptomyces antibioticus; E=4e-43 COG: MTH1093; COG1131 ABC-type multidrug transport system, ATPase; E=7e-45 BH1054_2; COG0842 Permease component of an ABC-transporter; E=7e-34 ybhF; COG1131 ABC-type multidrug transport system, ATPase component; E=9e-34 PFAM: PF01078; Magnesium chelatase, subunit Ch; E=0.047 PF00005; ABC transporter; E=8.8e-55; ABC transporter ATP-binding protein 6424299 1795868 RB11930 Rhodopirellula baltica SH 1 ABC transporter ATP-binding protein NP_870228.1 6423325 R 243090 CDS NP_870229.1 32477235 1795491 complement(6424310..6425479) 1 NC_005027.1 PMID: 8253713 PMID: 9537320 best DB hits: BLAST: gb:AAH00060.1; AAH00060 (BC000060) Unknown (protein for MGC:2077); E=9e-25 gb:AAF52915.1; (AE003628) CG5037 gene product [Drosophila; E=2e-24 gb:AAA21148.1; (U09466) heme A:farnesyltransferase [Homo sapiens]; E=4e-24 COG: YPL172c; COG0109 Polyprenyltransferase (cytochrome oxidase assembly; E=9e-23 VNG0666G_2; COG0109 Polyprenyltransferase (cytochrome oxidase; E=8e-11 AF2036; COG0109 Polyprenyltransferase (cytochrome oxidase assembly; E=4e-09 PFAM: PF01943; Polysaccharide biosynthesis pro; E=0.44 PF01040; UbiA prenyltransferase; E=1.5e-31; protoheme IX farnesyltransferase 6425479 cyoE 1795491 cyoE Rhodopirellula baltica SH 1 protoheme IX farnesyltransferase NP_870229.1 6424310 R 243090 CDS NP_870230.1 32477236 1794223 complement(6425493..6426563) 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S75621; hypothetical protein sll1898 - Synechocystis sp. (strain; E=7e-06 pir:D70314; heme O oxygenase - Aquifex aeolicus ----- gb:; E=0.14 COG: sll1898; COG1612 Uncharacterized protein required for cytochrome; E=7e-07 PFAM: PF02628; Cytochrome oxidase assembly protei; E=0.0068; hypothetical protein 6426563 1794223 RB11934 Rhodopirellula baltica SH 1 hypothetical protein NP_870230.1 6425493 R 243090 CDS NP_870231.1 32477237 1790989 complement(6426560..6426736) 1 NC_005027.1 signal peptide 6426736 1790989 RB11936 Rhodopirellula baltica SH 1 signal peptide NP_870231.1 6426560 R 243090 CDS NP_870232.1 32477238 1794160 complement(6426733..6428166) 1 NC_005027.1 PMID: 21429239 best DB hits: BLAST: embl:CAC28871.1; (AJ278984) PbrT protein [Ralstonia; E=0.003 pir:B82990; hypothetical protein PA5248 [imported] - Pseudomonas; E=0.017 swissprot:Q04441; COX2_BACFI CYTOCHROME C OXIDASE POLYPEPTIDE II; E=0.74 COG: PA5248_1; COG2010 Cytochrome c, mono- and diheme variants; E=0.003 PFAM: PF00034; Cytochrome c; E=0.23; cytochrome c 6428166 pbrT 1794160 pbrT Rhodopirellula baltica SH 1 cytochrome c NP_870232.1 6426733 R 243090 CDS NP_870233.1 32477239 1796850 complement(6427959..6428474) 1 NC_005027.1 hypothetical protein 6428474 1796850 RB11938 Rhodopirellula baltica SH 1 hypothetical protein NP_870233.1 6427959 R 243090 CDS NP_870234.1 32477240 1792815 6428116..6428586 1 NC_005027.1 hypothetical protein 6428586 1792815 RB11939 Rhodopirellula baltica SH 1 hypothetical protein NP_870234.1 6428116 D 243090 CDS NP_870235.1 32477241 1793189 complement(6428692..6429975) 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:A75561; conserved hypothetical protein - Deinococcus radiodurans; E=6e-16 embl:CAA66627.1; (X97985) ORF4 [Staphylococcus aureus]; E=1e-13 pir:S76793; hypothetical protein - Synechocystis sp. (strain PCC; E=3e-11 COG: DR0089; COG0463 Glycosyltransferases involved in cell wall; E=6e-17 MTH548; COG0784 CheY-like receiver domains; E=1e-06 PAB1246; COG1215 Glycosyltransferases, probably involved in cell; E=2e-06 PFAM: PF00535; Glycosyl transferase; E=3.5e-23; glycosyl transferase 6429975 1793189 RB11941 Rhodopirellula baltica SH 1 glycosyl transferase NP_870235.1 6428692 R 243090 CDS NP_870236.1 32477242 1795915 complement(6429924..6430775) 1 NC_005027.1 PMID: 7588751 best DB hits: BLAST: pir:S68196; hypothetical protein 9 - Myxococcus xanthus -----; E=5e-06 PFAM: PF01553; Acyltransferase; E=0.013; acyltransferase 6430775 1795915 RB11942 Rhodopirellula baltica SH 1 acyltransferase NP_870236.1 6429924 R 243090 CDS NP_870237.1 32477243 1793957 complement(6430772..6432376) 1 NC_005027.1 PMID: 7588751 PMID: 2263648 best DB hits: BLAST: swissprot:P54979; CRTJ_MYXXA PHYTOENE DEHYDROGENASE (PHYTOENE; E=2e-50 embl:CAA66626.1; (X97985) ORF3 [Staphylococcus aureus]; E=2e-48 pir:T31463; probable diapophytoene dehydrogenase crtN -; E=9e-47 COG: VNG1684G; COG1233 Phytoene dehydrogenase and related proteins; E=4e-41 PFAM: PF01266; D-amino acid oxidase; E=7.4e-05 PF01494; FAD binding domain; E=1.7e-06 PF02254; KTN NAD-binding domain; E=0.026; phytoene dehydrogenase 6432376 1793957 RB11943 Rhodopirellula baltica SH 1 phytoene dehydrogenase NP_870237.1 6430772 R 243090 CDS NP_870238.1 32477244 1792360 complement(6432441..6434111) 1 NC_005027.1 PMID: 7934828 PMID: 9384377 PMID: 89229122 best DB hits: BLAST: pir:T03560; probable aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) -; E=1e-31 pir:D83600; probable aldehyde dehydrogenase PA0366 [imported] -; E=3e-31 gb:AAG20575.1; (AE005128) aldehyde dehydrogenase (retinol); AldY1; E=5e-31 COG: PA0366; COG1012 NAD-dependent aldehyde dehydrogenases; E=3e-32 PFAM: PF00171; Aldehyde dehydrogenase; E=2.5e-20; aldehyde dehydrogenase 6434111 1792360 RB11945 Rhodopirellula baltica SH 1 aldehyde dehydrogenase NP_870238.1 6432441 R 243090 CDS NP_870239.1 32477245 1791765 6433969..6434574 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB13707.1; (AB040150) thermophilic NAD(P)H-flavin; E=2e-18 pir:B72384; bacterioferritin comigratory proteinNADH dehydrogenase; E=5e-08 swissprot:O26223; Y120_METTH NADH DEHYDROGENASENAD(P)H; E=0.003 COG: TM0386_2; COG0778 Nitroreductase; E=5e-09 PFAM: PF00881; Nitroreductase; E=3.3e-13; NAD(P)H-flavin oxidoreductase 6434574 1791765 RB11946 Rhodopirellula baltica SH 1 NAD(P)H-flavin oxidoreductase NP_870239.1 6433969 D 243090 CDS NP_870240.1 32477246 1794550 6434543..6435730 1 NC_005027.1 PMID: 9278503 PMID: 9097040 PMID: 8346225 best DB hits: BLAST: pir:F71315; probable response regulatory protein (atoC) - syphilis; E=1e-60 swissprot:P09570; NIFA_AZOVI NIF-SPECIFIC REGULATORY PROTEIN; E=2e-60 pir:A48291; ornithine decarboxylase inhibitor - Escherichia coli; E=3e-60 COG: TP0519; COG2204 AAA superfamily ATPases with N-terminal receiver; E=1e-61 aq_218_2; COG1221 NtrC family transcriptional regulators, ATPase; E=2e-59 hydG; COG2204 AAA superfamily ATPases with N-terminal receiver; E=9e-58 PFAM: PF00004; ATPase associated with variou; E=0.0057 PF00158; Sigma-54 interaction domain; E=6.7e-136; acetoacetate metabolism regulatory protein atoC 6435730 atoC 1794550 atoC Rhodopirellula baltica SH 1 acetoacetate metabolism regulatory protein atoC NP_870240.1 6434543 D 243090 CDS NP_870241.1 32477247 1793428 complement(6435752..6437896) 1 NC_005027.1 PMID: 97000351 best DB hits: BLAST: ddbj:BAB21059.1; (AB037178) xanthan lyase [Bacillus sp. GL1]; E=2e-08 embl:CAB62685.1; (AL133422) membrane protein.; E=3e-08 embl:CAB62757.1; (AL133424) secreted protein; E=8e-08 PFAM: PF00070; Pyridine nucleotide-disulphide; E=0.00038; secreted protein- xanthan lyase related 6437896 1793428 RB11948 Rhodopirellula baltica SH 1 secreted protein- xanthan lyase related NP_870241.1 6435752 R 243090 CDS NP_870242.1 32477248 1792251 6437923..6438510 1 NC_005027.1 hypothetical protein 6438510 1792251 RB11951 Rhodopirellula baltica SH 1 hypothetical protein NP_870242.1 6437923 D 243090 CDS NP_870243.1 32477249 1792476 complement(6438043..6438438) 1 NC_005027.1 signal peptide 6438438 1792476 RB11952 Rhodopirellula baltica SH 1 signal peptide NP_870243.1 6438043 R 243090 CDS NP_870244.1 32477250 1793020 complement(6438513..6442016) 1 NC_005027.1 PMID: 11410353 PMID: 11856348 PMID: 8969512 PMID: 11234002 best DB hits: BLAST: pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=1e-44 swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=9e-44 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=1e-42 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=1e-45 PFAM: PF00069; Protein kinase domain; E=9.2e-49; serine/threonine-protein kinase pknB 6442016 1793020 RB11955 Rhodopirellula baltica SH 1 serine/threonine-protein kinase pknB NP_870244.1 6438513 R 243090 CDS NP_870245.1 32477251 1795311 complement(6442110..6443018) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: embl:CAB93400.1; (AL357524) conserved hypothetical protein; E=2e-41 pir:C75447; conserved hypothetical protein - Deinococcus radiodurans; E=2e-38 ddbj:BAB06408.1; (AP001516) BH2689~unknown conserved protein in; E=1e-29 COG: DR1011; COG2107 Predicted periplasmic solute-binding protein; E=1e-39 PFAM: PF02642; Uncharacterized ACR, COG2107; E=5.8e-43; hypothetical protein 6443018 1795311 RB11958 Rhodopirellula baltica SH 1 hypothetical protein NP_870245.1 6442110 R 243090 CDS NP_870246.1 32477252 1792298 complement(6443097..6443939) 1 NC_005027.1 PMID: 8990304 PMID: 7893645 best DB hits: BLAST: swissprot:Q52419; DAPB_PSESZ DIHYDRODIPICOLINATE REDUCTASE (DHPR); E=7e-46 pir:C82080; dihydrodipicolinate reductase VC2391 [imported] - Vibrio; E=2e-44 swissprot:P38103; DAPB_PSEAE DIHYDRODIPICOLINATE REDUCTASE (DHPR); E=4e-43 COG: VC2391; COG0289 Dihydrodipicolinate reductase; E=2e-45 PFAM: PF01113; Dihydrodipicolinate reductase; E=2e-45; dihydrodipicolinate reductase 6443939 dapB 1792298 dapB Rhodopirellula baltica SH 1 dihydrodipicolinate reductase NP_870246.1 6443097 R 243090 CDS NP_870247.1 32477253 1791889 6443943..6444077 1 NC_005027.1 hypothetical protein 6444077 1791889 RB11960 Rhodopirellula baltica SH 1 hypothetical protein NP_870247.1 6443943 D 243090 CDS NP_870248.1 32477254 1790400 6444074..6444778 1 NC_005027.1 PMID: 10360571 PMID: 95286482 best DB hits: BLAST: gb:AAG18338.1; AF268317_1 (AF268317) ComE [Neisseria gonorrhoeae]; E=2e-06 pir:F72301; comEA protein-related protein - Thermotoga maritima; E=2e-06 embl:CAB44958.1; (AJ242837) ComEA protein [Neisseria; E=3e-06 COG: TM1052; COG1555 DNA uptake protein and related DNA-binding proteins; E=2e-07 slr0197_2; COG1555 DNA uptake protein and related DNA-binding; E=7e-05 VC1917; COG1555 DNA uptake protein and related DNA-binding proteins; E=1e-04 PFAM: PF00633; Helix-hairpin-helix motif.; E=0.4; competence protein ComEA 6444778 1790400 RB11961 Rhodopirellula baltica SH 1 competence protein ComEA NP_870248.1 6444074 D 243090 CDS NP_870249.1 32477255 1792893 6444840..6445160 1 NC_005027.1 PMID: 98263372 best DB hits: BLAST: embl:CAC11346.1; (AL445063) conserved hypothetical protein; E=4e-14 pir:F72369; conserved hypothetical protein - Thermotoga maritima; E=1e-12 pir:A71457; hypothetical protein PH0311 - Pyrococcus horikoshii; E=5e-12 COG: Ta0200; COG2151 aromatic ring hydroxylating enzyme; E=4e-15 slr0067; COG0489 ATPases involved in chromosome partitioning; E=0.007 PFAM: PF01883; Domain of unknown function DUF59; E=1.4e-19; component of ring hydroxylating complex 6445160 1792893 RB11964 Rhodopirellula baltica SH 1 component of ring hydroxylating complex NP_870249.1 6444840 D 243090 CDS NP_870250.1 32477256 1790967 6445166..6445558 1 NC_005027.1 PMID: 10876240 PMID: 3294803 PMID: 9278503 PMID: 8905232 PMID: 11206551 PMID: 11258796 PMID: 10493123 best DB hits: BLAST: swissprot:P08999; YBGC_ECOLI 15.6 KDA PROTEIN IN CYDB-TOLQ; E=2e-11 pir:D82152; conserved hypothetical protein VC1840 [imported] -; E=4e-11 gb:AAK03055.1; (AE006136) unknown [Pasteurella multocida]; E=8e-11 COG: ybgC; COG0824 Predicted thioesterase; E=2e-12; acyl-CoA thioesterase 6445558 tesB 1790967 tesB Rhodopirellula baltica SH 1 acyl-CoA thioesterase NP_870250.1 6445166 D 243090 CDS NP_870251.1 32477257 1792586 6445572..6446717 1 NC_005027.1 PMID: 9389475 best DB hits: BLAST: pir:D69211; conserved hypothetical protein MTH835 - Methanobacterium; E=4e-09 pir:G64401; hypothetical protein MJ0815 - Methanococcus jannaschii; E=7e-06 gb:AAB90178.1; (AE001029) conserved hypothetical protein; E=5e-05 COG: MTH835; COG1821 Predicted ATP-utilizing enzymes of ATP-grasp; E=4e-10 PFAM: PF02655; Domain of unknown function DU; E=5.6e-08; hypothetical protein 6446717 1792586 RB11969 Rhodopirellula baltica SH 1 hypothetical protein NP_870251.1 6445572 D 243090 CDS NP_870252.1 32477258 1790018 complement(6446722..6447543) 1 NC_005027.1 hypothetical protein 6447543 1790018 RB11973 Rhodopirellula baltica SH 1 hypothetical protein NP_870252.1 6446722 R 243090 CDS NP_870253.1 32477259 1792688 6447801..6455216 1 NC_005027.1 PMID: 10662695 PMID: 10649995 best DB hits: BLAST: gb:AAF26921.1; AF210843_18 (AF210843) polyketide synthase [Sorangium; E=0.0 gb:AAF26923.1; AF210843_20 (AF210843) polyketide synthase [Sorangium; E=0.0 gb:AAF62883.1; AF217189_6 (AF217189) epoD [Sorangium cellulosum]; E=0.0 COG: BS_fabD; COG0331 (acyl-carrier-protein) S-malonyltransferase; E=7e-31 PA2965; COG0304 3-oxoacyl-(acyl-carrier-protein) synthase I; E=3e-28 PA5234; COG0604 NADPH:quinone reductase and related Zn-dependent; E=2e-27 PFAM: PF00108; Thiolase, N-terminal domain; E=7.3e-07 PF00109; Beta-ketoacyl synthase, N-ter; E=1e-125 PF02801; Beta-ketoacyl synthase, C-ter; E=2.5e-77; polyketide synthase 6455216 1792688 RB11975 Rhodopirellula baltica SH 1 polyketide synthase NP_870253.1 6447801 D 243090 CDS NP_870254.1 32477260 1795672 complement(6455283..6455996) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:B83500; probable two-component response regulator PA1157; E=3e-51 pir:F82213; DNA-binding response regulator VC1320 [imported] -; E=4e-41 pir:C83420; probable two-component response regulator PA1799; E=3e-39 COG: PA1157; COG0745 Response regulators consisting of a CheY-like; E=3e-52 rstA; COG0745 Response regulators consisting of a CheY-like receiver; E=5e-34 BS_yclJ; COG0745 Response regulators consisting of a CheY-like; E=8e-34 PFAM: PF00072; Response regulator receiver doma; E=4e-27 PF00486; Transcriptional regulatory prote; E=2.7e-17; two-component response regulator 6455996 1795672 RB11976 Rhodopirellula baltica SH 1 two-component response regulator NP_870254.1 6455283 R 243090 CDS NP_870255.1 32477261 1792667 6455958..6456548 1 NC_005027.1 ATP-binding protein 6456548 1792667 RB11977 Rhodopirellula baltica SH 1 ATP-binding protein NP_870255.1 6455958 D 243090 CDS NP_870256.1 32477262 1792576 complement(6456627..6459272) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:B83340; hypothetical protein PA2451 [imported] - Pseudomonas; E=3e-11 swissprot:Q01578; GNL_ZYMMO GLUCONOLACTONASE PRECURSOR; E=2e-07 swissprot:P10478; XYNZ_CLOTM ENDO-1,4-BETA-XYLANASE Z PRECURSOR; E=4e-06 COG: PA2451; COG2382 Enterochelin esterase and related enzymes; E=3e-12 BS_ybbA; COG2819 Predicted hydrolase of the alpha/beta superfamily; E=0.001 fes; COG2382 Enterochelin esterase and related enzymes; E=0.002; hydrolase 6459272 1792576 RB11978 Rhodopirellula baltica SH 1 hydrolase NP_870256.1 6456627 R 243090 CDS NP_870257.1 32477263 1796807 6459460..6460413 1 NC_005027.1 PMID: 11058132 best DB hits: BLAST: pir:F75516; hypothetical protein - Deinococcus radiodurans (strain; E=8e-44 ddbj:BAB07122.1; (AP001518) ABC transporter (substrate-binding; E=1e-15 gb:AAG18895.1; (AE004992) Vng0316c [Halobacterium sp. NRC-1]; E=1e-15 COG: DR0462; COG0614 ABC-type Fe3+-siderophores transport systems,; E=7e-45 PFAM: PF01497; Periplasmic binding protein; E=0.18; ABC transporter substrate-binding protein 6460413 1796807 RB11981 Rhodopirellula baltica SH 1 ABC transporter substrate-binding protein NP_870257.1 6459460 D 243090 CDS NP_870258.1 32477264 1790251 6460440..6460583 1 NC_005027.1 hypothetical protein 6460583 1790251 RB11982 Rhodopirellula baltica SH 1 hypothetical protein NP_870258.1 6460440 D 243090 CDS NP_870259.1 32477265 1792702 complement(6460591..6460971) 1 NC_005027.1 PMID: 8201624 best DB hits: BLAST: swissprot:Q43925; HIS3_AZOCH PHOSPHORIBOSYL-AMP CYCLOHYDROLASE; E=3e-28 pir:E83011; phosphoribosyl-AMP cyclohydrolase PA5066 [imported] -; E=5e-28 swissprot:O26347; HIS3_METTH PHOSPHORIBOSYL-AMP CYCLOHYDROLASE; E=7e-25 COG: PA5066; COG0139 Phosphoribosyl-AMP cyclohydrolase; E=5e-29 PFAM: PF01502; Phosphoribosyl-AMP cyclohydrolase; E=2.5e-43; phosphoribosyl-AMP cyclohydrolase 6460971 hisI 1792702 hisI Rhodopirellula baltica SH 1 phosphoribosyl-AMP cyclohydrolase NP_870259.1 6460591 R 243090 CDS NP_870260.1 32477266 1794240 complement(6460980..6461987) 1 NC_005027.1 PMID: 11058132 PMID: 7602590 PMID: 1420281 best DB hits: BLAST: ddbj:BAB04654.1; (AP001510) quinone oxidoreductase [Bacillus; E=2e-43 embl:CAB65629.1; (AL136149) oxidoreductase.; E=1e-31 swissprot:P11415; QOR_CAVPO QUINONE OXIDOREDUCTASE (NADPH:QUINONE; E=3e-31 COG: BH0935; COG0604 NADPH:quinone reductase and related Zn-dependent; E=2e-44 PA5427; COG1064 Zn-dependent alcohol dehydrogenases; E=6e-15 BH0738; COG0604 NADPH:quinone reductase and related Zn-dependent; E=5e-14 PFAM: PF00106; short chain dehydrogenase; E=0.46 PF00107; Zinc-binding dehydrogenases; E=1.6e-79; quinone oxidoreductase 6461987 1794240 RB11985 Rhodopirellula baltica SH 1 quinone oxidoreductase NP_870260.1 6460980 R 243090 CDS NP_870261.1 32477267 1790887 complement(6462064..6465612) 1 NC_005027.1 PMID: 10762268 best DB hits: BLAST: gb:AAF04854.1; AF197912_1 (AF197912) histidine protein kinase; E=3e-57 pir:E83212; probable sensorresponse regulator hybrid PA3462; E=4e-56 pir:H83132; probable sensorresponse regulator hybrid PA4112; E=8e-51 COG: PA3462; COG0642 Sensory transduction histidine kinases; E=3e-57 PFAM: PF00989; PAS domain; E=3.5e-07 PF00512; His Kinase A (phosphoacceptor; E=2.5e-21 PF02518; Histidine kinase-, DNA gyrase; E=6.8e-39; histidine protein kinase homolog GacS 6465612 1790887 RB11986 Rhodopirellula baltica SH 1 histidine protein kinase homolog GacS NP_870261.1 6462064 R 243090 CDS NP_870262.1 32477268 1790485 complement(6465521..6468163) 1 NC_005027.1 PMID: 11410353 PMID: 11856348 PMID: 8969512 PMID: 11234002 best DB hits: BLAST: swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=2e-33 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=3e-33 swissprot:Q11053; PKNH_MYCTU PROBABLE SERINETHREONINE-PROTEIN; E=7e-29 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=3e-34 PFAM: PF00069; Protein kinase domain; E=6.5e-41; serine/threonine-protein kinase pknB 6468163 1790485 RB11988 Rhodopirellula baltica SH 1 serine/threonine-protein kinase pknB NP_870262.1 6465521 R 243090 CDS NP_870263.1 32477269 1794056 complement(6468160..6468810) 1 NC_005027.1 best DB hits: PFAM: PF00140; Sigma-70 factor; E=0.0091 PF00196; Bacterial regulatory proteins, l; E=0.0013; sigma factor 6468810 1794056 RB11990 Rhodopirellula baltica SH 1 sigma factor NP_870263.1 6468160 R 243090 CDS NP_870264.1 32477270 1792466 complement(6468817..6469734) 1 NC_005027.1 PMID: 10567266 PMID: 7678591 PMID: 7934817 best DB hits: BLAST: swissprot:P28606; YGLA_SYNP2 HYPOTHETICAL 34.1 KD PROTEIN IN GLNA; E=5e-60 embl:CAA78368.1; (Z13965) Portion of hypothetical protein; E=5e-60 embl:CAA78369.1; (Z13965) Portion of hypothetical protein; E=2e-54 COG: DR0833; COG0123 Deacetylases, including yeast histone deacetylase; E=3e-51 PFAM: PF00850; Histone deacetylase; E=1.2e-50; histone deacetylase 6469734 1792466 RB11991 Rhodopirellula baltica SH 1 histone deacetylase NP_870264.1 6468817 R 243090 CDS NP_870265.1 32477271 1792747 6469784..6470401 1 NC_005027.1 hypothetical protein 6470401 1792747 RB11992 Rhodopirellula baltica SH 1 hypothetical protein NP_870265.1 6469784 D 243090 CDS NP_870266.1 32477272 1793138 complement(6469886..6470458) 1 NC_005027.1 hypothetical protein 6470458 1793138 RB11993 Rhodopirellula baltica SH 1 hypothetical protein NP_870266.1 6469886 R 243090 CDS NP_870267.1 32477273 1795151 6470459..6472660 1 NC_005027.1 PMID: 9384377 best DB hits: BLAST: pir:B69988; hypothetical protein ytaP - Bacillus subtilis -----; E=0.20; hypothetical protein 6472660 1795151 RB11994 Rhodopirellula baltica SH 1 hypothetical protein NP_870267.1 6470459 D 243090 CDS NP_870268.1 32477274 1793525 complement(6472803..6474041) 1 NC_005027.1 best DB hits: BLAST: pir:E82768; conserved hypothetical protein XF0752 [imported] -; E=3e-13 pir:A82381; conserved hypothetical protein VCA1077 [imported] -; E=1e-10 pir:E83347; hypothetical protein PA2395 [imported] - Pseudomonas; E=4e-10 COG: XF0752_2; COG1262 Uncharacterized BCR; E=1e-13; transcriptional regulator 6474041 1793525 RB11998 Rhodopirellula baltica SH 1 transcriptional regulator NP_870268.1 6472803 R 243090 CDS NP_870269.1 32477275 1792595 complement(6474153..6474959) 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:F72334; conserved hypothetical protein - Thermotoga maritima; E=2e-16 pir:H75400; conserved hypothetical protein - Deinococcus radiodurans; E=6e-12 pir:S75046; hypothetical protein slr1718 - Synechocystis sp. (strain; E=3e-11 COG: TM0797; COG2045 Uncharacterized ACR; E=2e-17; hypothetical protein 6474959 1792595 RB12002 Rhodopirellula baltica SH 1 hypothetical protein NP_870269.1 6474153 R 243090 CDS NP_870270.1 32477276 1793681 complement(6475013..6475396) 1 NC_005027.1 hypothetical protein 6475396 1793681 RB12005 Rhodopirellula baltica SH 1 hypothetical protein NP_870270.1 6475013 R 243090 CDS NP_870271.1 32477277 1795348 6475429..6476454 1 NC_005027.1 PMID: 9849958 best DB hits: BLAST: gb:AAG59625.1; (AF301417) GU1 [Trypanosoma brucei]; E=2e-08 gb:AAF82144.1; AC034256_8 (AC034256) Contains similarity to F-box; E=1e-06 gb:AAC77910.1; (AF061443) G protein-coupled receptor LGR4 [Rattus; E=6e-05; G protein-coupled receptor LGR4 6476454 1795348 RB12006 Rhodopirellula baltica SH 1 G protein-coupled receptor LGR4 NP_870271.1 6475429 D 243090 CDS NP_870272.1 32477278 1790469 complement(6476467..6478047) 1 NC_005027.1 PMID: 8905231 PMID: 86083177 PMID: 90243674 best DB hits: BLAST: pir:S74805; DNA photolyase - Synechocystis sp. (strain PCC 6803); E=1e-121 pir:B82155; deoxyribodipyrimidine photolyase VC1814 [imported] -; E=5e-66 pir:E83062; deoxyribodipyrimidine photolyase PA4660 [imported] -; E=4e-49 COG: sll1629; COG0415 Deoxyribodipyrimidine photolyase; E=1e-123 PFAM: PF00875; DNA photolyase; E=4.8e-86; DNA photolyase 6478047 phr 1790469 phr Rhodopirellula baltica SH 1 DNA photolyase NP_870272.1 6476467 R 243090 CDS NP_870273.1 32477279 1792125 complement(6477951..6479495) 1 NC_005027.1 hypothetical protein 6479495 1792125 RB12009 Rhodopirellula baltica SH 1 hypothetical protein NP_870273.1 6477951 R 243090 CDS NP_870274.1 32477280 1790620 6479639..6481168 1 NC_005027.1 PMID: 9495747 best DB hits: BLAST: gb:AAC46146.1; (AF001974) xylulose kinase; XylB; E=1e-108 swissprot:P39211; XYLB_BACSU XYLULOSE KINASE (XYLULOKINASE); E=4e-79 ddbj:BAB06475.1; (AP001516) xylose kinase [Bacillus halodurans]; E=5e-76 COG: BS_xylB; COG1070 Sugar (pentulose and hexulose) kinases; E=4e-80 PAB2406; COG0554 Glycerol kinase; E=2e-31 APE0017; COG1070 Sugar (pentulose and hexulose) kinases; E=1e-27 PFAM: PF00370; FGGY family of carbohydrate kinas; E=6e-96 PF02782; FGGY family of carbohydrate kinas; E=7.6e-63; xylulose kinase 6481168 xylB 1790620 xylB Rhodopirellula baltica SH 1 xylulose kinase NP_870274.1 6479639 D 243090 CDS NP_870275.1 32477281 1792471 6481165..6482334 1 NC_005027.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 6482334 proB 1792471 proB Rhodopirellula baltica SH 1 gamma-glutamyl kinase NP_870275.1 6481165 D 243090 CDS NP_870276.1 32477282 1793188 complement(6482423..6483388) 1 NC_005027.1 hypothetical protein 6483388 1793188 RB12015 Rhodopirellula baltica SH 1 hypothetical protein NP_870276.1 6482423 R 243090 CDS NP_870277.1 32477283 1793461 6483600..6484598 1 NC_005027.1 PMID: 10984043 PMID: 9560382 best DB hits: BLAST: pir:T35322; hypothetical protein SC5H1.06c - Streptomyces coelicolor; E=1e-20 swissprot:P46336; IOLS_BACSU IOLS PROTEIN (VEGETATIVE PROTEIN 147); E=5e-18 pir:C83506; probable oxidoreductase PA1127 [imported] - Pseudomonas; E=9e-18 COG: BS_iolS; COG0667 Predicted oxidoreductases (related to aryl-alcohol; E=5e-19 Ta0027; COG0656 Aldo/keto reductases, related to diketogulonate; E=5e-07 PFAM: PF00248; Aldo/keto reductase; E=9e-24; oxidoreductase 6484598 1793461 RB12019 Rhodopirellula baltica SH 1 oxidoreductase NP_870277.1 6483600 D 243090 CDS NP_870278.1 32477284 1792338 complement(6484562..6484672) 1 NC_005027.1 hypothetical protein 6484672 1792338 RB12020 Rhodopirellula baltica SH 1 hypothetical protein NP_870278.1 6484562 R 243090 CDS NP_870279.1 32477285 1796967 complement(6484770..6485018) 1 NC_005027.1 hypothetical protein 6485018 1796967 RB12021 Rhodopirellula baltica SH 1 hypothetical protein NP_870279.1 6484770 R 243090 CDS NP_870280.1 32477286 1793657 complement(6485015..6486337) 1 NC_005027.1 hypothetical protein 6486337 1793657 RB12022 Rhodopirellula baltica SH 1 hypothetical protein NP_870280.1 6485015 R 243090 CDS NP_870281.1 32477287 1794227 complement(6486334..6489477) 1 NC_005027.1 best DB hits: PFAM: PF00034; Cytochrome c; E=0.15; signal peptide 6489477 1794227 RB12024 Rhodopirellula baltica SH 1 signal peptide NP_870281.1 6486334 R 243090 CDS NP_870282.1 32477288 1795200 6489580..6490374 1 NC_005027.1 hypothetical protein 6490374 1795200 RB12030 Rhodopirellula baltica SH 1 hypothetical protein NP_870282.1 6489580 D 243090 CDS NP_870283.1 32477289 1795343 complement(6490359..6490799) 1 NC_005027.1 hypothetical protein 6490799 1795343 RB12031 Rhodopirellula baltica SH 1 hypothetical protein NP_870283.1 6490359 R 243090 CDS NP_870284.1 32477290 1796972 6490966..6492021 1 NC_005027.1 hypothetical protein 6492021 1796972 RB12035 Rhodopirellula baltica SH 1 hypothetical protein NP_870284.1 6490966 D 243090 CDS NP_870285.1 32477291 1792555 6492138..6493271 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB04429.1; (AP001509) BH0710~unknown conserved protein; E=8e-91 pir:T34927; probable oxidoreductase - Streptomyces coelicolor; E=5e-84 embl:CAB88965.1; (AL353864) oxidoreductase.; E=3e-46 COG: BH0710; COG0673 Predicted dehydrogenases and related proteins; E=7e-92 PFAM: PF01408; Oxidoreductase, NAD-bin; E=7e-36 PF02894; Oxidoreductase, C-termi; E=6.8e-06; hypothetical protein 6493271 1792555 RB12038 Rhodopirellula baltica SH 1 hypothetical protein NP_870285.1 6492138 D 243090 CDS NP_870286.1 32477292 1794786 6493268..6494713 1 NC_005027.1 PMID: 8606183 PMID: 11283302 best DB hits: BLAST: pir:E82977; glycolate oxidase subunit GlcD PA5355 [imported] -; E=1e-102 pir:S74338; glycolate oxidase chain glcD - Synechocystis sp. (strain; E=1e-101 swissprot:P52075; GLCD_ECOLI GLYCOLATE OXIDASE SUBUNIT GLCD; E=1e-99 COG: PA5355; COG0277 FAD/FMN-containing dehydrogenases; E=1e-103 PFAM: PF01565; FAD binding domain; E=2.7e-55 PF02913; FAD linked oxidases, C-terminal; E=7.9e-53; glycolate oxidase subunit GlcD 6494713 glcD 1794786 glcD Rhodopirellula baltica SH 1 glycolate oxidase subunit GlcD NP_870286.1 6493268 D 243090 CDS NP_870287.1 32477293 1792982 6494706..6495938 1 NC_005027.1 PMID: 8606183 best DB hits: BLAST: pir:H65083; glycolate oxidase subunits GlcE and GlcF - Escherichia; E=6e-23 swissprot:P52073; GLCE_ECOLI GLYCOLATE OXIDASE SUBUNIT GLCE; E=6e-23 pir:D82977; glycolate oxidase subunit GlcE PA5354 [imported] -; E=1e-22 COG: glcF_1; COG0277 FAD/FMN-containing dehydrogenases; E=6e-24 PFAM: PF01565; FAD binding domain; E=6.6e-19; glycolate oxidase subunits GlcE and GlcF 6495938 glcE 1792982 glcE Rhodopirellula baltica SH 1 glycolate oxidase subunits GlcE and GlcF NP_870287.1 6494706 D 243090 CDS NP_870288.1 32477294 1794605 6495935..6497269 1 NC_005027.1 PMID: 8606183 best DB hits: BLAST: pir:G75361; glycolate oxidase, iron-sulfur subunit - Deinococcus; E=1e-101 pir:S75231; (S)-2-hydroxy-acid oxidase (EC 1.1.3.15) - Synechocystis; E=3e-62 ddbj:BAB05854.1; (AP001514) glycolate oxidase iron-sulfur subunit; E=2e-58 COG: DR1730; COG0247 Fe-S oxidoreductases; E=1e-102 PFAM: PF00037; 4Fe-4S binding domain; E=0.21 PF02754; Domain of unknown function (DUF2; E=4.9e-07; glycolate oxidase, iron-sulfur subunit 6497269 glcF 1794605 glcF Rhodopirellula baltica SH 1 glycolate oxidase, iron-sulfur subunit NP_870288.1 6495935 D 243090 CDS NP_870289.1 32477295 1796883 6497277..6497681 1 NC_005027.1 hypothetical protein 6497681 1796883 RB12043 Rhodopirellula baltica SH 1 hypothetical protein NP_870289.1 6497277 D 243090 CDS NP_870290.1 32477296 1793575 6497841..6497996 1 NC_005027.1 hypothetical protein 6497996 1793575 RB12046 Rhodopirellula baltica SH 1 hypothetical protein NP_870290.1 6497841 D 243090 CDS NP_870291.1 32477297 1795217 6497993..6499450 1 NC_005027.1 PMID: 8037924 PMID: 9278503 PMID: 8905232 PMID: 1931833 best DB hits: BLAST: swissprot:P25888; RHLE_ECOLI ATP-DEPENDENT RNA HELICASE; E=5e-78 gb:AAG55168.1; AE005260_7 (AE005260) ATP-dependent RNA; E=5e-78 pir:D83591; probable ATP-dependent RNA helicase PA0428 [imported] -; E=8e-77 COG: rhlE; COG0513 Superfamily II DNA and RNA helicases; E=4e-79 PFAM: PF00270; DEAD/DEAH box helicase; E=5.5e-70 PF02776; Thiamine pyrophosphate enzyme,; E=0.21 PF00271; Helicase conserved C-terminal d; E=3.5e-36; ATP-dependent RNA helicase rhlE 6499450 1795217 RB12047 Rhodopirellula baltica SH 1 ATP-dependent RNA helicase rhlE NP_870291.1 6497993 D 243090 CDS NP_870292.1 32477298 1794313 complement(6499453..6502215) 1 NC_005027.1 best DB hits: BLAST: pir:T49412; hypothetical protein B1D4.270 [imported] - Neurospora; E=0.89 PFAM: PF00432; Prenyltransferase and squalene ox; E=0.026; hypothetical protein 6502215 1794313 RB12048 Rhodopirellula baltica SH 1 hypothetical protein NP_870292.1 6499453 R 243090 CDS NP_870293.1 32477299 1794634 complement(6502199..6502558) 1 NC_005027.1 PMID: 10984043 PMID: 1644779 PMID: 2670903 best DB hits: BLAST: pir:F83274; conserved hypothetical protein PA2982 [imported] -; E=3e-04 embl:CAB50919.1; (AJ243354) hypothetical protein [Pseudomonas; E=7e-04 pir:S74451; hypothetical protein sll1405 - Synechocystis sp. (strain; E=0.001 COG: PA2982; COG0848 Biopolymer transport protein; E=3e-05 PFAM: PF02472; Biopolymer transport protein ExbD/To; E=1.6e-12; export protein ExbD 6502558 1794634 RB12053 Rhodopirellula baltica SH 1 export protein ExbD NP_870293.1 6502199 R 243090 CDS NP_870294.1 32477300 1793531 complement(6502628..6503587) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:G83274; probable tolQ-type transport protein PA2983 [imported] -; E=6e-07 pir:G70470; TolQ homolog - Aquifex aeolicus ----- gb:; E=3e-05 pir:D82726; conserved hypothetical protein XF1079 [imported] -; E=7e-04 COG: PA2983; COG0811 Biopolymer transport proteins; E=6e-08 PFAM: PF01618; MotA/TolQ/ExbB proton channel famil; E=6.7e-17; tolQ-type transport protein 6503587 1793531 RB12055 Rhodopirellula baltica SH 1 tolQ-type transport protein NP_870294.1 6502628 R 243090 CDS NP_870295.1 32477301 1796105 complement(6503584..6506925) 1 NC_005027.1 PMID: 10192388 best DB hits: BLAST: pir:T39943; hypothetical protein SPBC23E6.09 - fission yeast; E=2e-04 pir:C72048; tpr repeats-ct683 hypothetical protein - Chlamydophila; E=0.006 swissprot:P42810; YAG7_PSEAE HYPOTHETICAL PROTEIN PA4667 -----; E=0.24 COG: CPn0693; COG0457 TPR-repeat-containing proteins; E=6e-04 PFAM: PF00515; TPR Domain; E=0.0018 PF00903; Glyoxalase/Bleomycin resistance; E=0.85 PF00515; TPR Domain; E=0.52; hypothetical protein 6506925 1796105 RB12056 Rhodopirellula baltica SH 1 hypothetical protein NP_870295.1 6503584 R 243090 CDS NP_870296.1 32477302 1793172 complement(6506977..6507405) 1 NC_005027.1 hypothetical protein 6507405 1793172 RB12060 Rhodopirellula baltica SH 1 hypothetical protein NP_870296.1 6506977 R 243090 CDS NP_870297.1 32477303 1795494 complement(6507444..6509099) 1 NC_005027.1 CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 6509099 pyrG 1795494 pyrG Rhodopirellula baltica SH 1 CTP synthetase NP_870297.1 6507444 R 243090 CDS NP_870298.1 32477304 1794228 complement(6509306..6509911) 1 NC_005027.1 best DB hits: BLAST: pir:T07014; phosphoglycerate kinase (EC 2.7.2.3) precursor,; E=0.68; hypothetical protein 6509911 1794228 RB12064 Rhodopirellula baltica SH 1 hypothetical protein NP_870298.1 6509306 R 243090 CDS NP_870299.1 32477305 1793447 complement(6509803..6510318) 1 NC_005027.1 hypothetical protein 6510318 1793447 RB12065 Rhodopirellula baltica SH 1 hypothetical protein NP_870299.1 6509803 R 243090 CDS NP_870300.1 32477306 1790613 6510147..6510554 1 NC_005027.1 hypothetical protein 6510554 1790613 RB12066 Rhodopirellula baltica SH 1 hypothetical protein NP_870300.1 6510147 D 243090 CDS NP_870301.1 32477307 1794767 6510236..6510559 1 NC_005027.1 hypothetical protein 6510559 1794767 RB12067 Rhodopirellula baltica SH 1 hypothetical protein NP_870301.1 6510236 D 243090 CDS NP_870302.1 32477308 1793747 complement(6510594..6512255) 1 NC_005027.1 PMID: 8063104 PMID: 8635757 PMID: 12000953 best DB hits: BLAST: gb:AAB89850.1; (AE001008) conserved hypothetical protein; E=2e-06 swissprot:P54741; AFSK_STRCO SERINETHREONINE PROTEIN KINASE AFSK; E=1e-05 embl:CAB88430.1; (AL353815) serinethreonine protein kinase; E=1e-05 COG: AF1399; COG1520 Uncharacterized proteins of WD40-like repeat family; E=1e-07 PFAM: PF01011; PQQ enzyme repeat; E=0.00048; serine/threonine protein kinase afsK 6512255 1793747 RB12068 Rhodopirellula baltica SH 1 serine/threonine protein kinase afsK NP_870302.1 6510594 R 243090 CDS NP_870303.1 32477309 1792542 6512255..6512866 1 NC_005027.1 hypothetical protein 6512866 1792542 RB12071 Rhodopirellula baltica SH 1 hypothetical protein NP_870303.1 6512255 D 243090 CDS NP_870304.1 32477310 1790556 6512863..6512973 1 NC_005027.1 hypothetical protein 6512973 1790556 RB12072 Rhodopirellula baltica SH 1 hypothetical protein NP_870304.1 6512863 D 243090 CDS NP_870305.1 32477311 1794003 complement(6513066..6513974) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:A83457; conserved hypothetical protein PA1501 [imported] -; E=1e-17 pir:D83577; conserved hypothetical protein PA0550 [imported] -; E=8e-13 gb:AAG54864.1; AE005231_11 (AE005231) glyoxylate-induced protein; E=5e-12 COG: PA1501; COG1082 Predicted endonucleases; E=1e-18; hypothetical protein 6513974 1794003 RB12073 Rhodopirellula baltica SH 1 hypothetical protein NP_870305.1 6513066 R 243090 CDS NP_870306.1 32477312 1790945 6513960..6514211 1 NC_005027.1 hypothetical protein 6514211 1790945 RB12075 Rhodopirellula baltica SH 1 hypothetical protein NP_870306.1 6513960 D 243090 CDS NP_870307.1 32477313 1793826 complement(6514171..6515541) 1 NC_005027.1 keratin 6515541 1793826 RB12076 Rhodopirellula baltica SH 1 keratin NP_870307.1 6514171 R 243090 CDS NP_870308.1 32477314 1792247 6515568..6515732 1 NC_005027.1 hypothetical protein 6515732 1792247 RB12079 Rhodopirellula baltica SH 1 hypothetical protein NP_870308.1 6515568 D 243090 CDS NP_870309.1 32477315 1790650 complement(6515753..6517231) 1 NC_005027.1 PMID: 1860862 PMID: 9278503 PMID: 11206551 PMID: 11258796 PMID: 7928962 PMID: 8208244 PMID: 8132457 best DB hits: BLAST: swissprot:P24206; PIMT_ECOLI PROTEIN-L-ISOASPARTATE; E=7e-39 pir:G82311; protein-L-isoaspartate O-methyltransferase VC0532; E=3e-38 swissprot:P45683; PIMT_PSEAE PROTEIN-L-ISOASPARTATE; E=9e-36 COG: pcm; COG2518 Protein-L-isoaspartate carboxylmethyltransferase; E=7e-40 PFAM: PF00398; Ribosomal RNA adenine dimethyl; E=0.12 PF01135; Protein-L-isoaspartate(D-aspar; E=6.1e-63; protein-L-isoaspartate O-methyltransferase 6517231 1790650 RB12080 Rhodopirellula baltica SH 1 protein-L-isoaspartate O-methyltransferase NP_870309.1 6515753 R 243090 CDS NP_870310.1 32477316 1792212 complement(6517228..6518865) 1 NC_005027.1 PMID: 8380170 PMID: 9278503 PMID: 9205837 PMID: 11206551 PMID: 11258796 PMID: 8212131 best DB hits: BLAST: pir:S76869; hypothetical protein - Synechocystis sp. (strain PCC; E=2e-32 pir:C75615; exopolyphosphatase - Deinococcus radiodurans (strain R1); E=2e-27 swissprot:P29014; PPX_ECOLI EXOPOLYPHOSPHATASE (METAPHOSPHATASE); E=4e-27 COG: sll1546; COG0248 Exopolyphosphatase; E=2e-33 PFAM: PF02541; Ppx/GppA phosphatase; E=6e-15 PF01966; HD domain; E=0.084; exopolyphosphatase 6518865 1792212 RB12081 Rhodopirellula baltica SH 1 exopolyphosphatase NP_870310.1 6517228 R 243090 CDS NP_870311.1 32477317 1794420 complement(6518874..6519608) 1 NC_005027.1 PMID: 11466286 best DB hits: BLAST: pir:A75406; hydrolase - Deinococcus radiodurans (strain R1) -----; E=0.048 gb:AAG59075.1; AE005619_8 (AE005619) phosphatase; E=0.11 pir:S40829; hypothetical 23.5K protein (glnA-fdhE intergenic region); E=0.12 COG: DR1344; COG1011 Predicted hydrolases of the HAD superfamily; E=0.005 PFAM: PF00702; haloacid dehalogenase-like hydrolas; E=0.72; hydrolase- phosphatase or haloacid dehydrogenase 6519608 1794420 RB12082 Rhodopirellula baltica SH 1 hydrolase- phosphatase or haloacid dehydrogenase NP_870311.1 6518874 R 243090 CDS NP_870312.1 32477318 1794311 complement(6519572..6520429) 1 NC_005027.1 hypothetical protein 6520429 1794311 RB12084 Rhodopirellula baltica SH 1 hypothetical protein NP_870312.1 6519572 R 243090 CDS NP_870313.1 32477319 1790064 6520422..6520637 1 NC_005027.1 hypothetical protein 6520637 1790064 RB12086 Rhodopirellula baltica SH 1 hypothetical protein NP_870313.1 6520422 D 243090 CDS NP_870314.1 32477320 1792707 6520558..6522321 1 NC_005027.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 6522321 ilvD 1792707 ilvD Rhodopirellula baltica SH 1 dihydroxy-acid dehydratase NP_870314.1 6520558 D 243090 CDS NP_870315.1 32477321 1794244 complement(6522441..6522755) 1 NC_005027.1 hypothetical protein 6522755 1794244 RB12088 Rhodopirellula baltica SH 1 hypothetical protein NP_870315.1 6522441 R 243090 CDS NP_870316.1 32477322 1793234 complement(6522897..6524414) 1 NC_005027.1 PMID: 8244397 PMID: 8325651 best DB hits: BLAST: gb:AAA16877.1; (L13329) iduronate-2-sulfatase [Homo sapiens]; E=7e-51 gb:AAB33747.1; iduronate-2-sulfatase, IDS {EC 3.1.6.13} [human,; E=3e-50 gb:AAA37880.1; (L07921) iduronate sulfatase [Mus musculus]; E=1e-47 COG: PA0031; COG3119 Arylsulfatase A and related enzymes; E=3e-35 BS_yfnI; COG1368 Phosphoglycerol transferase and related proteins,; E=9e-04 PA0924; COG3083 Predicted hydrolase of alkaline phosphatase; E=0.004 PFAM: PF00884; Sulfatase; E=2e-22; iduronate-2-sulfatase 6524414 1793234 RB12089 Rhodopirellula baltica SH 1 iduronate-2-sulfatase NP_870316.1 6522897 R 243090 CDS NP_870317.1 32477323 1792647 complement(6524631..6526481) 1 NC_005027.1 PMID: 94292193 best DB hits: BLAST: gb:AAF30402.1; AF109924_1 (AF109924) sulfatase 1 precursor [Helix; E=1e-36 ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=6e-36 embl:CAA34667.1; (X16679) arylsulfatase [Hemicentrotus; E=4e-32 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=2e-28 PFAM: PF00884; Sulfatase; E=8.4e-49; N-acetylgalactosamine 6-sulfate sulfatase (GALNS) 6526481 1792647 RB12092 Rhodopirellula baltica SH 1 N-acetylgalactosamine 6-sulfate sulfatase (GALNS) NP_870317.1 6524631 R 243090 CDS NP_870318.1 32477324 1794277 6526718..6529564 1 NC_005027.1 signal peptide 6529564 1794277 RB12097 Rhodopirellula baltica SH 1 signal peptide NP_870318.1 6526718 D 243090 CDS NP_870319.1 32477325 1794560 6529595..6531028 1 NC_005027.1 hypothetical protein 6531028 1794560 RB12102 Rhodopirellula baltica SH 1 hypothetical protein NP_870319.1 6529595 D 243090 CDS NP_870320.1 32477326 1790889 6531127..6531540 1 NC_005027.1 best DB hits: BLAST: pir:T05663; hypothetical protein F22I13.120 - Arabidopsis thaliana; E=0.65; hypothetical protein 6531540 1790889 RB12104 Rhodopirellula baltica SH 1 hypothetical protein NP_870320.1 6531127 D 243090 CDS NP_870321.1 32477327 1795715 complement(6531471..6532994) 1 NC_005027.1 PMID: 9864319 PMID: 10984043 best DB hits: BLAST: swissprot:O67868; AMPA_AQUAE PROBABLE CYTOSOL AMINOPEPTIDASE; E=6e-73 pir:F82843; aminopeptidase AI XF0138 [imported] - Xylella; E=3e-70 swissprot:O68822; AMPA_PSEAE CYTOSOL AMINOPEPTIDASE (LEUCINE; E=1e-67 COG: aq_2099; COG0260 Leucyl aminopeptidase; E=5e-74 PFAM: PF00883; Cytosol aminopeptidase; E=1.7e-148; cytosol aminopeptidase 6532994 pepA 1795715 pepA Rhodopirellula baltica SH 1 cytosol aminopeptidase NP_870321.1 6531471 R 243090 CDS NP_870322.1 32477328 1794387 complement(6533049..6534506) 1 NC_005027.1 PMID: 9665876 PMID: 8346225 best DB hits: BLAST: ddbj:BAB06667.1; (AP001517) two-component response regulator in; E=2e-87 pir:F71315; probable response regulatory protein (atoC) - syphilis; E=1e-85 gb:AAF33506.1; (AF170176) Salmonella typhimurium transcriptional; E=5e-83 COG: BH2948; COG2204 AAA superfamily ATPases with N-terminal receiver; E=2e-88 aq_218_2; COG1221 NtrC family transcriptional regulators, ATPase; E=1e-66 CT468; COG2204 AAA superfamily ATPases with N-terminal receiver; E=5e-66 PFAM: PF00072; Response regulator receiver doma; E=1.2e-32 PF00158; Sigma-54 interaction domain; E=1.7e-122; response regulatory protein (atoC) 6534506 1794387 RB12108 Rhodopirellula baltica SH 1 response regulatory protein (atoC) NP_870322.1 6533049 R 243090 CDS NP_870323.1 32477329 1796103 complement(6534622..6534792) 1 NC_005027.1 hypothetical protein 6534792 1796103 RB12110 Rhodopirellula baltica SH 1 hypothetical protein NP_870323.1 6534622 R 243090 CDS NP_870324.1 32477330 1793174 complement(6534940..6536790) 1 NC_005027.1 best DB hits: BLAST: pir:T50995; related to cytoskeleton assembly control protein SLA1; E=6e-07 pir:T37781; probable cytoskeleton assembly control protein - fission; E=5e-05 embl:CAA84826.1; (Z35768) ORF YBL007c [Saccharomyces cerevisiae]; E=0.18; cytoskeleton assembly control protein SLA1 6536790 1793174 RB12112 Rhodopirellula baltica SH 1 cytoskeleton assembly control protein SLA1 NP_870324.1 6534940 R 243090 CDS NP_870325.1 32477331 1796855 complement(6536791..6540042) 1 NC_005027.1 PMID: 8905231 PMID: 6308632 best DB hits: BLAST: swissprot:P00968; CARB_ECOLI CARBAMOYL-PHOSPHATE SYNTHASE LARGE; E=0.0 pir:S76557; carbamoyl-phosphate synthase (glutamine-hydrolyzing) (EC; E=0.0 gb:AAG10606.1; AC008030_6 (AC008030) carbamoyl phosphate synthetase; E=0.0 COG: AF1274; COG0458 Carbamoylphosphate synthase large subunit (split gene; E=0.0 carB; COG0458 Carbamoylphosphate synthase large subunit (split gene in; E=0.0 BU144; COG0458 Carbamoylphosphate synthase large subunit (split gene; E=0.0 PFAM: PF00289; Carbamoyl-phosphate synthase L; E=2.9e-53 PF02222; ATP-grasp domain; E=0.38 PF02786; Carbamoyl-phosphate synthase L; E=3.6e-108; carbamoyl-phosphate synthase (glutamine-hydrolyzing) large chain 6540042 carB 1796855 carB Rhodopirellula baltica SH 1 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large chain NP_870325.1 6536791 R 243090 CDS NP_870326.1 32477332 1793442 complement(6539927..6540259) 1 NC_005027.1 hypothetical protein 6540259 1793442 RB12114 Rhodopirellula baltica SH 1 hypothetical protein NP_870326.1 6539927 R 243090 CDS NP_870327.1 32477333 1793795 complement(6540281..6541348) 1 NC_005027.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 6541348 dnaQ 1793795 dnaQ Rhodopirellula baltica SH 1 DNA polymerase III subunit epsilon NP_870327.1 6540281 R 243090 CDS NP_870328.1 32477334 1795901 6541425..6541811 1 NC_005027.1 hypothetical protein 6541811 1795901 RB12117 Rhodopirellula baltica SH 1 hypothetical protein NP_870328.1 6541425 D 243090 CDS NP_870329.1 32477335 1792712 complement(6541757..6543253) 1 NC_005027.1 best DB hits: PFAM: PF01319; Cholesterol oxidase; E=0.23; hypothetical protein 6543253 1792712 RB12118 Rhodopirellula baltica SH 1 hypothetical protein NP_870329.1 6541757 R 243090 CDS NP_870330.1 32477336 1794743 complement(6543314..6545887) 1 NC_005027.1 best DB hits: BLAST: gb:AAF73802.1; AF154033_1 (AF154033) surface protein PspC; E=0.82; signal peptide 6545887 1794743 RB12124 Rhodopirellula baltica SH 1 signal peptide NP_870330.1 6543314 R 243090 CDS NP_870331.1 32477337 1795004 6545870..6548362 1 NC_005027.1 PMID: 9634230 PMID: 6353409 best DB hits: BLAST: swissprot:O06200; SYT_MYCTU THREONYL-TRNA SYNTHETASE; E=1e-124 pir:F83303; threonyl-tRNA synthetase PA2744 [imported] - Pseudomonas; E=8e-81 swissprot:O67583; SYT_AQUAE THREONYL-TRNA SYNTHETASE; E=2e-80 COG: Rv2614c; COG0441 Threonyl-tRNA synthetase; E=1e-125 PFAM: PF02824; TGS domain; E=2.6e-07 PF00587; tRNA synthetase class II (G, H,; E=7.8e-85; threonyl-tRNA synthetase 6548362 1795004 RB12129 Rhodopirellula baltica SH 1 threonyl-tRNA synthetase NP_870331.1 6545870 D 243090 CDS NP_870332.1 32477338 1794372 6548396..6548635 1 NC_005027.1 hypothetical protein 6548635 1794372 RB12131 Rhodopirellula baltica SH 1 hypothetical protein NP_870332.1 6548396 D 243090 CDS NP_870333.1 32477339 1793082 complement(6548550..6548702) 1 NC_005027.1 hypothetical protein 6548702 1793082 RB12132 Rhodopirellula baltica SH 1 hypothetical protein NP_870333.1 6548550 R 243090 CDS NP_870334.1 32477340 1790863 complement(6548699..6550105) 1 NC_005027.1 PMID: 1644752 PMID: 1644751 best DB hits: BLAST: pir:E75324; ArgEDapE/Acy1 family protein - Deinococcus radiodurans; E=1e-114 ddbj:BAB07594.1; (AP001520) BH3875~unknown conserved protein in; E=1e-103 embl:CAC01315.1; (AL390968) peptidase [Streptomyces; E=5e-82 COG: DR2025; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate; E=1e-115 YFR044c; COG0624 Acetylornithine; E=2e-65 DR2017; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate; E=7e-46 PFAM: PF01546; Peptidase M20/M25/M40; E=2e-48; ArgE/DapE/Acy1 family protein 6550105 dapE 1790863 dapE Rhodopirellula baltica SH 1 ArgE/DapE/Acy1 family protein NP_870334.1 6548699 R 243090 CDS NP_870335.1 32477341 1791064 6550288..6550638 1 NC_005027.1 PMID: 10952301 best DB hits: BLAST: swissprot:Q9KSW3; YB43_VIBCH HYPOTHETICAL PROTEIN VC1143 -----; E=2e-07 swissprot:Q9I0L7; YQ21_PSEAE HYPOTHETICAL PROTEIN PA2621; E=2e-04 swissprot:P75832; YLJA_ECOLI PROTEIN YLJA ----- pir: A64827; E=9e-04 COG: VC1143; COG2127 Uncharacterized ACR; E=2e-08 PFAM: PF02617; Uncharacterized ACR, COG2127; E=1.6e-08; hypothetical protein 6550638 1791064 RB12137 Rhodopirellula baltica SH 1 hypothetical protein NP_870335.1 6550288 D 243090 CDS NP_870336.1 32477342 1792986 6550672..6551958 1 NC_005027.1 PMID: 10086841 best DB hits: BLAST: ddbj:BAB05070.1; (AP001511) BH1351~unknown conserved protein; E=4e-78 swissprot:P54462; YQEV_BACSU HYPOTHETICAL 51.7 KD PROTEIN IN; E=3e-75 pir:G81594; conserved hypothetical protein CP0277 [imported] -; E=3e-67 COG: BH1351; COG0621 Fe-S oxidoreductases family 1; E=3e-79 PFAM: PF00919; Uncharacterized protein famil; E=3.3e-29 PF02143; Radical activating enzyme; E=0.53; hypothetical protein 6551958 1792986 RB12138 Rhodopirellula baltica SH 1 hypothetical protein NP_870336.1 6550672 D 243090 CDS NP_870337.1 32477343 1793054 6551955..6552308 1 NC_005027.1 best DB hits: BLAST: gb:AAG21389.1; AF302051_3 (AF302051) unknown [Bacillus; E=4e-15 ddbj:BAB07716.1; (AP001520) BH3997~unknown conserved protein in; E=6e-15 pir:C83047; conserved hypothetical protein PA4789 [imported] -; E=1e-12 COG: BH3997; COG1694 Predicted pyrophosphatase; E=6e-16; hypothetical protein 6552308 1793054 RB12139 Rhodopirellula baltica SH 1 hypothetical protein NP_870337.1 6551955 D 243090 CDS NP_870338.1 32477344 1793781 6552539..6552850 1 NC_005027.1 hypothetical protein 6552850 1793781 RB12142 Rhodopirellula baltica SH 1 hypothetical protein NP_870338.1 6552539 D 243090 CDS NP_870339.1 32477345 1791297 complement(6552826..6553137) 1 NC_005027.1 hypothetical protein 6553137 1791297 RB12144 Rhodopirellula baltica SH 1 hypothetical protein NP_870339.1 6552826 R 243090 CDS NP_870340.1 32477346 1791017 complement(6553176..6554285) 1 NC_005027.1 PMID: 11058132 PMID: 3045084 best DB hits: BLAST: ddbj:BAB05138.1; (AP001512) molybdopterin biosynthesis [Bacillus; E=4e-58 pir:E69845; thiamin biosynthesis homolog yjbU - Bacillus subtilis; E=3e-57 pir:F69659; molybdopterin biosynthesis protein moeB - Bacillus; E=1e-50 COG: BH1419; COG0476 Dinucleotide-utilizing enzymes involved in; E=4e-59 PFAM: PF02254; KTN NAD-binding domain; E=0.29 PF00899; ThiF family; E=1e-46; molybdopterin biosynthesis protein MoeB 6554285 1791017 RB12145 Rhodopirellula baltica SH 1 molybdopterin biosynthesis protein MoeB NP_870340.1 6553176 R 243090 CDS NP_870341.1 32477347 1792539 complement(6554674..6556800) 1 NC_005027.1 PMID: 10984043 PMID: 1729701 best DB hits: BLAST: pir:C83238; periplasmic tail-specific proteinase PA3257 [imported] -; E=5e-91 pir:F82634; tail-specific proteinase XF1823 [imported] - Xylella; E=5e-87 gb:AAK02353.1; (AE006061) Prc [Pasteurella multocida]; E=3e-75 COG: PA3257; COG0793 Periplasmic protease; E=4e-92 PFAM: PF00595; PDZ domain (Also known as DHR or GLG; E=1.1e-09 PF02692; Interphotoreceptor retinoid-binding; E=0.78; periplasmic tail-specific proteinase 6556800 prc 1792539 prc Rhodopirellula baltica SH 1 periplasmic tail-specific proteinase NP_870341.1 6554674 R 243090 CDS NP_870342.1 32477348 1793206 6556901..6557062 1 NC_005027.1 hypothetical protein 6557062 1793206 RB12150 Rhodopirellula baltica SH 1 hypothetical protein NP_870342.1 6556901 D 243090 CDS NP_870343.1 32477349 1794394 complement(6557051..6557587) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB18046.1; (AB033991) BtrG [Bacillus circulans]; E=0.10; hypothetical protein 6557587 1794394 RB12151 Rhodopirellula baltica SH 1 hypothetical protein NP_870343.1 6557051 R 243090 CDS NP_870344.1 32477350 1794757 complement(6557588..6557737) 1 NC_005027.1 hypothetical protein 6557737 1794757 RB12152 Rhodopirellula baltica SH 1 hypothetical protein NP_870344.1 6557588 R 243090 CDS NP_870345.1 32477351 1792358 complement(6557715..6557966) 1 NC_005027.1 hypothetical protein 6557966 1792358 RB12153 Rhodopirellula baltica SH 1 hypothetical protein NP_870345.1 6557715 R 243090 CDS NP_870346.1 32477352 1791033 6557988..6561179 1 NC_005027.1 signal peptide 6561179 1791033 RB12155 Rhodopirellula baltica SH 1 signal peptide NP_870346.1 6557988 D 243090 CDS NP_870347.1 32477353 1794312 6561122..6562663 1 NC_005027.1 hypothetical protein 6562663 1794312 RB12159 Rhodopirellula baltica SH 1 hypothetical protein NP_870347.1 6561122 D 243090 CDS NP_870348.1 32477354 1793645 complement(6562778..6563104) 1 NC_005027.1 PMID: 1379743 PMID: 3891733 PMID: 6099324 best DB hits: BLAST: swissprot:P00274; THIO_ECOLI THIOREDOXIN 1 (TRX1) (TRX) -----; E=3e-26 gb:AAG58975.1; AE005609_7 (AE005609) thioredoxin 1 [Escherichia; E=3e-26 pdb:2TRX; A Chain A, Thioredoxin ----- pdb: 2TRX B Chain B,; E=3e-26 COG: trxA; COG0526 Thiol-disulfide isomerase and thioredoxins; E=3e-27 PFAM: PF02114; Phosducin; E=0.01 PF00085; Thioredoxin; E=3.3e-47; thioredoxin 6563104 trxA 1793645 trxA Rhodopirellula baltica SH 1 thioredoxin NP_870348.1 6562778 R 243090 CDS NP_870349.1 32477355 1792296 complement(6563352..6564185) 1 NC_005027.1 PMID: 9389475 PMID: 93015679 best DB hits: BLAST: gb:AAB89052.1; (AE000953) mutator protein MutT, ; E=2e-04 swissprot:Q23236; YPAI_CAEEL HYPOTHETICAL 21.3 KD PROTEIN Y38A8.1; E=2e-04 ddbj:BAB05000.1; (AP001511) BH1281~unknown conserved protein in; E=6e-04 COG: AF2200; COG0494 NTP pyrophosphohydrolases including oxidative damage; E=2e-05 sll1054; COG0494 NTP pyrophosphohydrolases including oxidative; E=0.005 mutT; COG0494 NTP pyrophosphohydrolases including oxidative damage; E=0.007 PFAM: PF00293; MutT-like domain; E=7.1e-16; mutator protein MutT 6564185 1792296 RB12164 Rhodopirellula baltica SH 1 mutator protein MutT NP_870349.1 6563352 R 243090 CDS NP_870350.1 32477356 1793805 complement(6564302..6565081) 1 NC_005027.1 hypothetical protein 6565081 1793805 RB12167 Rhodopirellula baltica SH 1 hypothetical protein NP_870350.1 6564302 R 243090 CDS NP_870351.1 32477357 1791301 complement(6565221..6565736) 1 NC_005027.1 hypothetical protein 6565736 1791301 RB12168 Rhodopirellula baltica SH 1 hypothetical protein NP_870351.1 6565221 R 243090 CDS NP_870352.1 32477358 1794202 complement(6565829..6566260) 1 NC_005027.1 hypothetical protein 6566260 1794202 RB12172 Rhodopirellula baltica SH 1 hypothetical protein NP_870352.1 6565829 R 243090 CDS NP_870353.1 32477359 1794206 complement(6566298..6567437) 1 NC_005027.1 PMID: 7921252 best DB hits: BLAST: pir:E81292; flagellar P-ring protein Cj1462 [imported] -; E=5e-16 pir:G72242; flagellar P-ring protein - Thermotoga maritima (strain; E=2e-11 pir:A71957; flagellar P-ring protein - Helicobacter pylori (strain; E=3e-11 COG: Cj1462; COG1706 Flagellar basal-body P-ring protein; E=5e-17 PFAM: PF02119; Flagellar P-ring protein; E=0.00098; flagellar P-ring protein 6567437 flgI 1794206 flgI Rhodopirellula baltica SH 1 flagellar P-ring protein NP_870353.1 6566298 R 243090 CDS NP_870354.1 32477360 1790879 complement(6567437..6568342) 1 NC_005027.1 PMID: 2211524 PMID: 9161424 PMID: 7921252 best DB hits: BLAST: pir:A83511; flagellar L-ring protein precursor FlgH PA1083; E=2e-08 swissprot:O67609; FLGH_AQUAE FLAGELLAR L-RING PROTEIN PRECURSOR; E=6e-08 gb:AAG29750.1; AF205139_2 (AF205139) flagellar L-ring protein; E=3e-06 COG: PA1083; COG2063 Flagellar basal body L-ring protein; E=2e-09 PFAM: PF02107; Flagellar L-ring protein; E=7.9e-15; flagellar L-ring protein precursor FlgH 6568342 flgH 1790879 flgH Rhodopirellula baltica SH 1 flagellar L-ring protein precursor FlgH NP_870354.1 6567437 R 243090 CDS NP_870355.1 32477361 1795472 complement(6568324..6569757) 1 NC_005027.1 PMID: 10832645 best DB hits: BLAST: pir:C83227; hypothetical protein PA3350 [imported] - Pseudomonas; E=4e-04 gb:AAA97472.1; (U51896) LfgA [Vibrio parahaemolyticus]; E=0.012 COG: PA3350; COG1261 Flagellar basal body P-ring biosynthesis protein; E=4e-05; flagellar basal body P-ring biosynthesis protein FlgA 6569757 1795472 RB12178 Rhodopirellula baltica SH 1 flagellar basal body P-ring biosynthesis protein FlgA NP_870355.1 6568324 R 243090 CDS NP_870356.1 32477362 1791228 complement(6569761..6570567) 1 NC_005027.1 PMID: 2129540 best DB hits: BLAST: pir:C70372; flagellar hook basal body protein flgG - Aquifex; E=3e-55 pir:A64718; flagellar basal body rod protein flgG - Helicobacter; E=2e-51 pir:F71801; flagellar basal-body rod protein (distal rod protein) -; E=4e-51 COG: aq_834; COG1749 Flagellar basal body and hook proteins; E=2e-56 PFAM: PF00460; Flagella basal body rod protein; E=4.1e-13; flagellar hook basal body protein flgG 6570567 flgG 1791228 flgG Rhodopirellula baltica SH 1 flagellar hook basal body protein flgG NP_870356.1 6569761 R 243090 CDS NP_870357.1 32477363 1791356 complement(6570608..6571429) 1 NC_005027.1 PMID: 10411267 best DB hits: BLAST: gb:AAB71784.1; (U95165) FlgF [Agrobacterium tumefaciens]; E=1e-17 ddbj:BAB06168.1; (AP001515) flagellar hook protein [Bacillus; E=1e-16 swissprot:Q06171; FLGF_CAUCR FLAGELLAR BASAL-BODY ROD PROTEIN FLGF; E=3e-16 COG: BH2449; COG1749 Flagellar basal body and hook proteins; E=1e-17 PFAM: PF00460; Flagella basal body rod protein; E=0.00036; FlgF 6571429 flgF 1791356 flgF Rhodopirellula baltica SH 1 FlgF NP_870357.1 6570608 R 243090 CDS NP_870358.1 32477364 1796786 complement(6571799..6573556) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:F82960; hypothetical protein PA5487 [imported] - Pseudomonas; E=8e-27 pir:A71678; probable response regulatory protein RP237 - Rickettsia; E=7e-22 pir:C83247; hypothetical protein PA3177 [imported] - Pseudomonas; E=2e-21 COG: PA5487; COG2199 Diguanylate cyclase/phosphodiesterase domain 1; E=8e-28 PFAM: PF00990; GGDEF domain; E=2.8e-45; hypothetical protein 6573556 1796786 RB12183 Rhodopirellula baltica SH 1 hypothetical protein NP_870358.1 6571799 R 243090 CDS NP_870359.1 32477365 1789973 6573557..6573865 1 NC_005027.1 hypothetical protein 6573865 1789973 RB12188 Rhodopirellula baltica SH 1 hypothetical protein NP_870359.1 6573557 D 243090 CDS NP_870360.1 32477366 1789944 6573875..6574369 1 NC_005027.1 hypothetical protein 6574369 1789944 RB12189 Rhodopirellula baltica SH 1 hypothetical protein NP_870360.1 6573875 D 243090 CDS NP_870361.1 32477367 1794475 6574386..6574535 1 NC_005027.1 hypothetical protein 6574535 1794475 RB12190 Rhodopirellula baltica SH 1 hypothetical protein NP_870361.1 6574386 D 243090 CDS NP_870362.1 32477368 1792558 complement(6574497..6575870) 1 NC_005027.1 best DB hits: BLAST: pir:T16625; asparagine synthase (glutamine-hydrolyzing) (EC 6.3.5.4); E=0.030 gb:AAC25799.1; (AF022973) Contains similarity to Pfam domain:; E=0.29 ddbj:BAB05227.1; (AP001512) asparagine synthetase [Bacillus; E=0.39 PFAM: PF00733; Asparagine synthase; E=0.75; asparagine synthase 6575870 1792558 RB12191 Rhodopirellula baltica SH 1 asparagine synthase NP_870362.1 6574497 R 243090 CDS NP_870363.1 32477369 1790136 complement(6575867..6575977) 1 NC_005027.1 hypothetical protein 6575977 1790136 RB12193 Rhodopirellula baltica SH 1 hypothetical protein NP_870363.1 6575867 R 243090 CDS NP_870364.1 32477370 1793161 complement(6575974..6576972) 1 NC_005027.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 6576972 hemH 1793161 hemH Rhodopirellula baltica SH 1 phosphoribosylaminoimidazole-succinocarboxamide synthase NP_870364.1 6575974 R 243090 CDS NP_870365.1 32477371 1792746 complement(6576929..6577078) 1 NC_005027.1 hypothetical protein 6577078 1792746 RB12196 Rhodopirellula baltica SH 1 hypothetical protein NP_870365.1 6576929 R 243090 CDS NP_870366.1 32477372 1795211 complement(6577129..6577659) 1 NC_005027.1 PMID: 9784136 PMID: 1457399 best DB hits: BLAST: pir:A71465; probable translation initiation factor IF-3 - Chlamydia; E=3e-28 swissprot:O84840; IF3_CHLTR TRANSLATION INITIATION FACTOR IF-3; E=4e-27 pir:C81727; translation initiation factor 3 TC0221 [imported] -; E=7e-27 COG: CT833; COG0290 Translation initiation factor IF3; E=3e-29 PFAM: PF00707; Translation initiation factor IF-3; E=1.4e-74; translation initiation factor IF-3 6577659 infC 1795211 infC Rhodopirellula baltica SH 1 translation initiation factor IF-3 NP_870366.1 6577129 R 243090 CDS NP_870367.1 32477373 1793829 6577614..6577778 1 NC_005027.1 hypothetical protein 6577778 1793829 RB12199 Rhodopirellula baltica SH 1 hypothetical protein NP_870367.1 6577614 D 243090 CDS NP_870368.1 32477374 1790597 complement(6577800..6577955) 1 NC_005027.1 hypothetical protein 6577955 1790597 RB12200 Rhodopirellula baltica SH 1 hypothetical protein NP_870368.1 6577800 R 243090 CDS NP_870369.1 32477375 1793483 complement(6577952..6578161) 1 NC_005027.1 best DB hits: BLAST: embl:CAB71199.1; (AL138538) sugar hydrolase; E=0.77; hypothetical protein 6578161 1793483 RB12201 Rhodopirellula baltica SH 1 hypothetical protein NP_870369.1 6577952 R 243090 CDS NP_870370.1 32477376 1793854 complement(6578185..6579810) 1 NC_005027.1 PMID: 9082984 best DB hits: BLAST: swissprot:P55636; Y4RC_RHISN INTEGRASERECOMBINASE Y4RC; E=1e-04 pir:D72312; integrase-recombinase - Thermotoga maritima; E=2e-04 gb:AAF64651.1; AF200320_1 (AF200320) IntA [Bradyrhizobium; E=3e-04 COG: TM0967; COG0582 Integrase; E=2e-05 PFAM: PF00589; Phage integrase; E=4.8e-15; integrase-recombinase 6579810 1793854 RB12202 Rhodopirellula baltica SH 1 integrase-recombinase NP_870370.1 6578185 R 243090 CDS NP_870371.1 32477377 1794294 complement(6579810..6580163) 1 NC_005027.1 hypothetical protein 6580163 1794294 RB12204 Rhodopirellula baltica SH 1 hypothetical protein NP_870371.1 6579810 R 243090 CDS NP_870372.1 32477378 1794678 complement(6580225..6580875) 1 NC_005027.1 best DB hits: PFAM: PF01381; Helix-turn-helix; E=8.3e-05; hypothetical protein 6580875 1794678 RB12205 Rhodopirellula baltica SH 1 hypothetical protein NP_870372.1 6580225 R 243090 CDS NP_870373.1 32477379 1790467 complement(6580879..6581034) 1 NC_005027.1 hypothetical protein 6581034 1790467 RB12206 Rhodopirellula baltica SH 1 hypothetical protein NP_870373.1 6580879 R 243090 CDS NP_870374.1 32477380 1793297 6581058..6581447 1 NC_005027.1 hypothetical protein 6581447 1793297 RB12208 Rhodopirellula baltica SH 1 hypothetical protein NP_870374.1 6581058 D 243090 CDS NP_870375.1 32477381 1794781 complement(6581329..6581661) 1 NC_005027.1 PMID: 11226165 best DB hits: BLAST: swissprot:Q57615; Y151_METJA HYPOTHETICAL TRANSCRIPTIONAL; E=0.77 PFAM: PF00356; Bacterial regulatory proteins,; E=0.089 PF01325; Iron dependent repressor, N-te; E=0.048; transcriptional regulator 6581661 1794781 RB12209 Rhodopirellula baltica SH 1 transcriptional regulator NP_870375.1 6581329 R 243090 CDS NP_870376.1 32477382 1793648 complement(6581658..6582578) 1 NC_005027.1 PMID: 6323420 best DB hits: BLAST: pir:E83029; replicative DNA helicase PA4931 [imported] - Pseudomonas; E=6e-04 swissprot:Q9ZJM5; DNAB_HELPJ REPLICATIVE DNA HELICASE -----; E=0.002 gb:AAK00231.1; AF229444_1 (AF229444) replicative DNA helicase DnaB; E=0.003 COG: PA4931; COG0305 Replicative DNA helicase; E=6e-05 PFAM: PF00772; DnaB-like helicase; E=4.3e-05; replicative DNA helicase 6582578 dnaB 1793648 dnaB Rhodopirellula baltica SH 1 replicative DNA helicase NP_870376.1 6581658 R 243090 CDS NP_870377.1 32477383 1796793 complement(6582575..6583543) 1 NC_005027.1 hypothetical protein 6583543 1796793 RB12213 Rhodopirellula baltica SH 1 hypothetical protein NP_870377.1 6582575 R 243090 CDS NP_870378.1 32477384 1795418 complement(6583543..6584118) 1 NC_005027.1 hypothetical protein 6584118 1795418 RB12214 Rhodopirellula baltica SH 1 hypothetical protein NP_870378.1 6583543 R 243090 CDS NP_870379.1 32477385 1793821 complement(6584102..6584611) 1 NC_005027.1 hypothetical protein 6584611 1793821 RB12215 Rhodopirellula baltica SH 1 hypothetical protein NP_870379.1 6584102 R 243090 CDS NP_870380.1 32477386 1795760 complement(6584735..6584932) 1 NC_005027.1 hypothetical protein 6584932 1795760 RB12217 Rhodopirellula baltica SH 1 hypothetical protein NP_870380.1 6584735 R 243090 CDS NP_870381.1 32477387 1792501 complement(6584993..6586411) 1 NC_005027.1 hypothetical protein 6586411 1792501 RB12219 Rhodopirellula baltica SH 1 hypothetical protein NP_870381.1 6584993 R 243090 CDS NP_870382.1 32477388 1796856 complement(6586512..6587027) 1 NC_005027.1 hypothetical protein 6587027 1796856 RB12220 Rhodopirellula baltica SH 1 hypothetical protein NP_870382.1 6586512 R 243090 CDS NP_870383.1 32477389 1791305 complement(6586973..6587167) 1 NC_005027.1 hypothetical protein 6587167 1791305 RB12221 Rhodopirellula baltica SH 1 hypothetical protein NP_870383.1 6586973 R 243090 CDS NP_870384.1 32477390 1795490 6587469..6588230 1 NC_005027.1 hypothetical protein 6588230 1795490 RB12223 Rhodopirellula baltica SH 1 hypothetical protein NP_870384.1 6587469 D 243090 CDS NP_870385.1 32477391 1789936 complement(6588366..6588806) 1 NC_005027.1 best DB hits: BLAST: pir:T35737; probable integral membrane protein - Streptomyces; E=0.006; hypothetical protein 6588806 1789936 RB12227 Rhodopirellula baltica SH 1 hypothetical protein NP_870385.1 6588366 R 243090 CDS NP_870386.1 32477392 1791286 complement(6588840..6589403) 1 NC_005027.1 hypothetical protein 6589403 1791286 RB12229 Rhodopirellula baltica SH 1 hypothetical protein NP_870386.1 6588840 R 243090 CDS NP_870387.1 32477393 1790397 complement(6589721..6590035) 1 NC_005027.1 hypothetical protein 6590035 1790397 RB12231 Rhodopirellula baltica SH 1 hypothetical protein NP_870387.1 6589721 R 243090 CDS NP_870388.1 32477394 1794556 6590023..6590160 1 NC_005027.1 hypothetical protein 6590160 1794556 RB12232 Rhodopirellula baltica SH 1 hypothetical protein NP_870388.1 6590023 D 243090 CDS NP_870389.1 32477395 1791998 6590157..6590510 1 NC_005027.1 hypothetical protein 6590510 1791998 RB12233 Rhodopirellula baltica SH 1 hypothetical protein NP_870389.1 6590157 D 243090 CDS NP_870390.1 32477396 1791463 complement(6590661..6590993) 1 NC_005027.1 hypothetical protein 6590993 1791463 RB12234 Rhodopirellula baltica SH 1 hypothetical protein NP_870390.1 6590661 R 243090 CDS NP_870391.1 32477397 1789971 6590935..6591546 1 NC_005027.1 hypothetical protein 6591546 1789971 RB12236 Rhodopirellula baltica SH 1 hypothetical protein NP_870391.1 6590935 D 243090 CDS NP_870392.1 32477398 1793963 6591383..6593143 1 NC_005027.1 PMID: 1317380 best DB hits: BLAST: swissprot:P27291; OSMY_ECOLI OSMOTICALLY INDUCIBLE PROTEIN Y; E=4e-05 gb:AAG59556.1; AE005668_11 (AE005668) hyperosmotically inducible; E=8e-05 gb:AAD56642.1; AF178441_1 (AF178441) Smc22-1 [Sinorhizobium; E=2e-04 COG: osmY; COG2823 Predicted periplasmic or secreted lipoprotein; E=4e-06; osmotically inducible protein Y 6593143 osmY 1793963 osmY Rhodopirellula baltica SH 1 osmotically inducible protein Y NP_870392.1 6591383 D 243090 CDS NP_870393.1 32477399 1793151 6593334..6594635 1 NC_005027.1 PMID: 9043130 best DB hits: BLAST: gb:AAD45539.1; U70376_1 (U70376) InsA [Streptomyces netropsis]; E=5e-33 gb:AAG60893.1; AF322013_12 (AF322013) ID460 [Bradyrhizobium; E=8e-33 ddbj:BAA19966.1; (D63923) transposase [Acetobacter pasteurianus]; E=1e-26; transposase 6594635 1793151 RB12239 Rhodopirellula baltica SH 1 transposase NP_870393.1 6593334 D 243090 CDS NP_870394.1 32477400 1792520 6594646..6594798 1 NC_005027.1 hypothetical protein 6594798 1792520 RB12240 Rhodopirellula baltica SH 1 hypothetical protein NP_870394.1 6594646 D 243090 CDS NP_870395.1 32477401 1793736 complement(6594886..6596139) 1 NC_005027.1 best DB hits: BLAST: pdb:1DBO; A Chain A, Crystal Structure Of Chondroitinase B -----; E=0.049; chondroitinase B 6596139 1793736 RB12241 Rhodopirellula baltica SH 1 chondroitinase B NP_870395.1 6594886 R 243090 CDS NP_870396.1 32477402 1792775 6596256..6596423 1 NC_005027.1 hypothetical protein 6596423 1792775 RB12243 Rhodopirellula baltica SH 1 hypothetical protein NP_870396.1 6596256 D 243090 CDS NP_870397.1 32477403 1794989 6596420..6596815 1 NC_005027.1 hypothetical protein 6596815 1794989 RB12245 Rhodopirellula baltica SH 1 hypothetical protein NP_870397.1 6596420 D 243090 CDS NP_870398.1 32477404 1794319 complement(6596824..6597048) 1 NC_005027.1 best DB hits: BLAST: gb:AAG19657.1; (AE005054) Vng1314h [Halobacterium sp. NRC-1]; E=3e-12; hypothetical protein 6597048 1794319 RB12247 Rhodopirellula baltica SH 1 hypothetical protein NP_870398.1 6596824 R 243090 CDS NP_870399.1 32477405 1791098 6597248..6597562 1 NC_005027.1 PMID: 10952301 best DB hits: BLAST: pir:H82471; hypothetical protein VCA0329 VCA0298 VCA0343; E=4e-11; hypothetical protein 6597562 1791098 RB12250 Rhodopirellula baltica SH 1 hypothetical protein NP_870399.1 6597248 D 243090 CDS NP_870400.1 32477406 1789937 complement(6597559..6599262) 1 NC_005027.1 PMID: 7768826 best DB hits: BLAST: swissprot:P46358; RFAY_XANCP PROBABLE RNA POLYMERASE SIGMA FACTOR; E=2e-22 ddbj:BAB03982.1; (AP001507) RNA polymerase ECF-type sigma factor; E=7e-15 swissprot:Q45585; SIGW_BACSU RNA POLYMERASE SIGMA FACTOR SIGW; E=4e-14 COG: BH0263; COG1595 DNA-directed RNA polymerase specialized sigma; E=6e-16 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=6.8e-12; RNA polymerase ECF-type sigma factor 6599262 1789937 RB12251 Rhodopirellula baltica SH 1 RNA polymerase ECF-type sigma factor NP_870400.1 6597559 R 243090 CDS NP_870401.1 32477407 1795425 complement(6599415..6599696) 1 NC_005027.1 hypothetical protein 6599696 1795425 RB12255 Rhodopirellula baltica SH 1 hypothetical protein NP_870401.1 6599415 R 243090 CDS NP_870402.1 32477408 1794797 complement(6599656..6600402) 1 NC_005027.1 best DB hits: BLAST: pir:S32217; hypothetical protein 2 - Bacillus megaterium -----; E=4e-16 pir:A82542; conserved hypothetical protein XF2574 [imported] -; E=5e-14 pir:D75404; phosphatidylglycerophosphatase B-related protein -; E=4e-13 COG: XF2574; COG0671 Membrane-associated phospholipid phosphatase; E=5e-15 PFAM: PF01569; PAP2 superfamily; E=1.4e-30; membrane-associated phospholipid phosphatase 6600402 1794797 RB12256 Rhodopirellula baltica SH 1 membrane-associated phospholipid phosphatase NP_870402.1 6599656 R 243090 CDS NP_870403.1 32477409 1791782 complement(6600532..6600777) 1 NC_005027.1 signal peptide 6600777 1791782 RB12260 Rhodopirellula baltica SH 1 signal peptide NP_870403.1 6600532 R 243090 CDS NP_870404.1 32477410 1794152 6600710..6601963 1 NC_005027.1 flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine; nitric oxide dioxygenase 6601963 fhp 1794152 fhp Rhodopirellula baltica SH 1 nitric oxide dioxygenase NP_870404.1 6600710 D 243090 CDS NP_870405.1 32477411 1792993 6602070..6602405 1 NC_005027.1 PMID: 9371463 best DB hits: BLAST: pir:D69060; hypothetical protein MTH1452 - Methanobacterium; E=5e-12 gb:AAG09974.1; AF248038_3 (AF248038) unknown [Streptococcus; E=5e-10 pir:D70381; hypothetical protein aq_943 - Aquifex aeolicus -----; E=0.017 COG: MTH1452; COG1917 Uncharacterized ACR, double-stranded beta-helix; E=5e-13; hypothetical protein 6602405 1792993 RB12264 Rhodopirellula baltica SH 1 hypothetical protein NP_870405.1 6602070 D 243090 CDS NP_870406.1 32477412 1796871 complement(6602402..6602530) 1 NC_005027.1 hypothetical protein 6602530 1796871 RB12265 Rhodopirellula baltica SH 1 hypothetical protein NP_870406.1 6602402 R 243090 CDS NP_870407.1 32477413 1791416 6602558..6602755 1 NC_005027.1 hypothetical protein 6602755 1791416 RB12266 Rhodopirellula baltica SH 1 hypothetical protein NP_870407.1 6602558 D 243090 CDS NP_870408.1 32477414 1790386 6602697..6602951 1 NC_005027.1 PMID: 8824840 best DB hits: BLAST: pir:JC4545; hypothetical 7.9k protein - Barophilic bacterium; E=4e-18 ddbj:BAA11902.1; (D83386) ORF1 [Shewanella violacea]; E=3e-17 ddbj:BAA25109.1; (D88194) pressure-regulated ORF1 [Mariana; E=0.006; pressure-regulated protein 6602951 1790386 RB12267 Rhodopirellula baltica SH 1 pressure-regulated protein NP_870408.1 6602697 D 243090 CDS NP_870409.1 32477415 1794761 complement(6602929..6603069) 1 NC_005027.1 hypothetical protein 6603069 1794761 RB12268 Rhodopirellula baltica SH 1 hypothetical protein NP_870409.1 6602929 R 243090 CDS NP_870410.1 32477416 1793434 complement(6603109..6603225) 1 NC_005027.1 hypothetical protein 6603225 1793434 RB12269 Rhodopirellula baltica SH 1 hypothetical protein NP_870410.1 6603109 R 243090 CDS NP_870411.1 32477417 1791275 6603241..6604980 1 NC_005027.1 signal peptide 6604980 1791275 RB12271 Rhodopirellula baltica SH 1 signal peptide NP_870411.1 6603241 D 243090 CDS NP_870412.1 32477418 1792059 6605112..6605444 1 NC_005027.1 PMID: 11759840 best DB hits: BLAST: gb:AAC04411.1; (AF047657) F37B4.8 gene product [Caenorhabditis; E=0.22; hypothetical protein 6605444 1792059 RB12276 Rhodopirellula baltica SH 1 hypothetical protein NP_870412.1 6605112 D 243090 CDS NP_870413.1 32477419 1794763 6605390..6605548 1 NC_005027.1 hypothetical protein 6605548 1794763 RB12278 Rhodopirellula baltica SH 1 hypothetical protein NP_870413.1 6605390 D 243090 CDS NP_870414.1 32477420 1792661 complement(6605545..6606558) 1 NC_005027.1 PMID: 11296222 best DB hits: BLAST: pir:S76700; hypothetical protein - Synechocystis sp. (strain PCC; E=1e-41 pir:F75546; conserved hypothetical protein - Deinococcus radiodurans; E=3e-09 gb:AAG19543.1; (AE005044) Vng1164c [Halobacterium sp. NRC-1]; E=9e-08 COG: slr0109; COG0668 Small-conductance mechanosensitive channel; E=9e-43 PA5022; COG3264 Small-conductance mechanosensitive channel; E=2e-05 TP0822; COG0668 Small-conductance mechanosensitive channel; E=3e-05 PFAM: PF00924; Uncharacterized protein family UPF00; E=2.1e-24; small-conductance mechanosensitive channel 6606558 1792661 RB12279 Rhodopirellula baltica SH 1 small-conductance mechanosensitive channel NP_870414.1 6605545 R 243090 CDS NP_870415.1 32477421 1792665 complement(6606519..6607739) 1 NC_005027.1 hypothetical protein 6607739 1792665 RB12281 Rhodopirellula baltica SH 1 hypothetical protein NP_870415.1 6606519 R 243090 CDS NP_870416.1 32477422 1794249 complement(6607884..6609191) 1 NC_005027.1 best DB hits: BLAST: embl:CAB83202.1; (AJ277117) membrane protein; E=4e-35 pir:H82825; transport protein XF0281 [imported] - Xylella fastidiosa; E=8e-26 swissprot:O34472; YRRI_BACSU HYPOTHETICAL 39.6 KDA PROTEIN IN; E=2e-13 COG: XF0281; COG0628 Predicted permease; E=7e-27 PFAM: PF01594; Domain of unknown function DUF20; E=0.3; permease 6609191 1794249 RB12282 Rhodopirellula baltica SH 1 permease NP_870416.1 6607884 R 243090 CDS NP_870417.1 32477423 1792858 6609220..6609378 1 NC_005027.1 hypothetical protein 6609378 1792858 RB12283 Rhodopirellula baltica SH 1 hypothetical protein NP_870417.1 6609220 D 243090 CDS NP_870418.1 32477424 1795630 6609391..6610065 1 NC_005027.1 PMID: 10484179 best DB hits: BLAST: ddbj:BAB05775.1; (AP001514) BH2056~unknown conserved protein in; E=1e-12 pir:T45542; hypothetical protein [imported] - Klebsiella pneumoniae; E=1e-08 gb:AAG10237.1; AF201699_2 (AF201699) phospholipid; E=6e-05 COG: BH2056; COG0030 Dimethyladenosine transferase (rRNA methylation); E=1e-13 Rv2622; COG0500 SAM-dependent methyltransferases; E=6e-04; dimethyladenosine transferase (rRNA methylation) 6610065 1795630 RB12285 Rhodopirellula baltica SH 1 dimethyladenosine transferase (rRNA methylation) NP_870418.1 6609391 D 243090 CDS NP_870419.1 32477425 1790266 complement(6610120..6610293) 1 NC_005027.1 hypothetical protein 6610293 1790266 RB12286 Rhodopirellula baltica SH 1 hypothetical protein NP_870419.1 6610120 R 243090 CDS NP_870420.1 32477426 1791091 6610364..6611110 1 NC_005027.1 best DB hits: PFAM: PF00339; Arrestin (or S-antigen), N-terminal; E=0.73; signal peptide 6611110 1791091 RB12287 Rhodopirellula baltica SH 1 signal peptide NP_870420.1 6610364 D 243090 CDS NP_870421.1 32477427 1793949 complement(6611074..6611199) 1 NC_005027.1 hypothetical protein 6611199 1793949 RB12289 Rhodopirellula baltica SH 1 hypothetical protein NP_870421.1 6611074 R 243090 CDS NP_870422.1 32477428 1795469 complement(6611214..6612575) 1 NC_005027.1 PMID: 3525165 PMID: 1633824 best DB hits: BLAST: prf:2102322C; energy-transducing nicotinamide nucleotide; E=5e-91 pir:T18520; transhydrogenase homolog 7B2 - Eimeria tenella -----; E=1e-88 pir:A81885; probable NAD(P)+ transhydrogenase (B-specific) (EC; E=1e-87 COG: NMB0978; COG1282 NAD/NADP transhydrogenase beta subunit; E=6e-88 PFAM: PF02233; NAD(P) transhydrogenase beta subunit; E=1.1e-206; NAD(P) transhydrogenase subunit beta 6612575 pntB 1795469 pntB Rhodopirellula baltica SH 1 NAD(P) transhydrogenase subunit beta NP_870422.1 6611214 R 243090 CDS NP_870423.1 32477429 1791575 complement(6612572..6612871) 1 NC_005027.1 PMID: 3525165 PMID: 1633824 best DB hits: BLAST: pir:G70618; probable pntAB protein - Mycobacterium tuberculosis; E=1e-09 pir:S77433; NAD(P)+ transhydrogenase (B-specific) (EC 1.6.1.1) alpha; E=2e-08 prf:2102322B; energy-transducing nicotinamide nucleotide; E=7e-07 COG: Rv0156; COG3288 NAD/NADP transhydrogenase alpha subunit; E=1e-10; NAD(P) transhydrogenase subunit alpha 6612871 1791575 RB12291 Rhodopirellula baltica SH 1 NAD(P) transhydrogenase subunit alpha NP_870423.1 6612572 R 243090 CDS NP_870424.1 32477430 1789934 complement(6612905..6614041) 1 NC_005027.1 PMID: 3525165 PMID: 1633824 best DB hits: BLAST: prf:2102322A; energy-transducing nicotinamide nucleotide; E=8e-76 pir:S77433; NAD(P)+ transhydrogenase (B-specific) (EC 1.6.1.1) alpha; E=9e-74 gb:AAK00588.1; (AY026033) pyridine nucleotide transhydrogenase; E=1e-72 COG: slr1239; COG3288 NAD/NADP transhydrogenase alpha subunit; E=9e-75 BH2329; COG0686 Alanine dehydrogenase; E=4e-26 PFAM: PF01266; D-amino acid oxidase; E=0.05 PF00070; Pyridine nucleotide-disulphide oxid; E=0.00011 PF01262; Alanine dehydrogenase/pyridine nucl; E=5.4e-89; NAD(P) transhydrogenase subunit alpha 6614041 pntA 1789934 pntA Rhodopirellula baltica SH 1 NAD(P) transhydrogenase subunit alpha NP_870424.1 6612905 R 243090 CDS NP_870425.1 32477431 1793269 6614190..6614450 1 NC_005027.1 hypothetical protein 6614450 1793269 RB12295 Rhodopirellula baltica SH 1 hypothetical protein NP_870425.1 6614190 D 243090 CDS NP_870426.1 32477432 1793683 complement(6614403..6615422) 1 NC_005027.1 PMID: 2583128 best DB hits: BLAST: pir:F75374; probable ketoacyl reductase - Deinococcus radiodurans; E=4e-49 gb:AAF18286.1; (AF088897) oxidoreductase; orf4 [Zymomonas; E=5e-25 swissprot:P37694; HETN_ANASP KETOACYL REDUCTASE HETN -----; E=2e-22 COG: DR1620; COG1028 Dehydrogenases with different specificities (related; E=4e-50 slr0315; COG1028 Dehydrogenases with different specificities; E=5e-21 PA1537; COG1028 Dehydrogenases with different specificities (related; E=8e-21 PFAM: PF00106; short chain dehydrogenase; E=3.2e-61; ketoacyl reductase 6615422 1793683 RB12296 Rhodopirellula baltica SH 1 ketoacyl reductase NP_870426.1 6614403 R 243090 CDS NP_870427.1 32477433 1796901 6615598..6616107 1 NC_005027.1 hypothetical protein 6616107 1796901 RB12297 Rhodopirellula baltica SH 1 hypothetical protein NP_870427.1 6615598 D 243090 CDS NP_870428.1 32477434 1792499 6616214..6616765 1 NC_005027.1 PMID: 9371463 best DB hits: BLAST: pir:D69230; hypothetical protein MTH974 - Methanobacterium; E=0.81; hypothetical protein 6616765 1792499 RB12301 Rhodopirellula baltica SH 1 hypothetical protein NP_870428.1 6616214 D 243090 CDS NP_870429.1 32477435 1794181 complement(6616882..6618759) 1 NC_005027.1 best DB hits: BLAST: pir:H69064; serinethreonine protein kinase related protein -; E=3e-04 gb:AAG20856.1; (AE005154) Vng6189h [Halobacterium sp. NRC-1]; E=0.007 gb:AAF16758.1; AC010155_11 (AC010155) F3M18.23 [Arabidopsis; E=0.014 COG: MTH1485; COG1520 Uncharacterized proteins of WD40-like repeat family; E=3e-05 PFAM: PF01011; PQQ enzyme repeat; E=0.0074; serine/threonine protein kinase related protein 6618759 1794181 RB12303 Rhodopirellula baltica SH 1 serine/threonine protein kinase related protein NP_870429.1 6616882 R 243090 CDS NP_870430.1 32477436 1793952 complement(6618856..6620247) 1 NC_005027.1 PMID: 10048488 best DB hits: BLAST: ddbj:BAB10826.1; (AB016892) receptor protein kinase-like protein; E=0.011 embl:CAB51834.1; (AJ243961) contains eukaryotic protein kinase; E=0.057 gb:AAG50525.1; AC084221_7 (AC084221) hypothetical protein; E=0.28; receptor protein kinase-like protein 6620247 1793952 RB12305 Rhodopirellula baltica SH 1 receptor protein kinase-like protein NP_870430.1 6618856 R 243090 CDS NP_870431.1 32477437 1795325 complement(6620454..6622730) 1 NC_005027.1 PMID: 1835671 PMID: 7768349 best DB hits: BLAST: swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=2e-35 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=2e-35 pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=1e-32 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=2e-36 PFAM: PF00069; Protein kinase domain; E=8.9e-53; serine/threonine-protein kinase 6622730 1795325 RB12310 Rhodopirellula baltica SH 1 serine/threonine-protein kinase NP_870431.1 6620454 R 243090 CDS NP_870432.1 32477438 1792709 complement(6622715..6622885) 1 NC_005027.1 hypothetical protein 6622885 1792709 RB12312 Rhodopirellula baltica SH 1 hypothetical protein NP_870432.1 6622715 R 243090 CDS NP_870433.1 32477439 1795669 complement(6622846..6623412) 1 NC_005027.1 PMID: 11936079 PMID: 3052291 best DB hits: BLAST: embl:CAB72200.1; (AL138851) RNA polymerase sigma factor; E=0.060 PFAM: PF00196; Bacterial regulatory proteins; E=0.59; extracytoplasmic sigma factor ECF 6623412 1795669 RB12313 Rhodopirellula baltica SH 1 extracytoplasmic sigma factor ECF NP_870433.1 6622846 R 243090 CDS NP_870434.1 32477440 1796867 complement(6623400..6623609) 1 NC_005027.1 hypothetical protein 6623609 1796867 RB12314 Rhodopirellula baltica SH 1 hypothetical protein NP_870434.1 6623400 R 243090 CDS NP_870435.1 32477441 1795885 6623653..6624207 1 NC_005027.1 PMID: 1856235 best DB hits: BLAST: ddbj:BAB06720.1; (AP001517) maltose transacetylase (maltose; E=3e-44 swissprot:P37515; MAA_BACSU PROBABLE MALTOSE O-ACETYLTRANSFERASE; E=1e-43 swissprot:P77791; MAA_ECOLI MALTOSE O-ACETYLTRANSFERASE (MALTOSE; E=3e-40 COG: BH3001; COG0110 Acetyltransferases (the isoleucine patch; E=3e-45 ylaD; COG0110 Acetyltransferases (the isoleucine patch superfamily); E=3e-41 YJL218w; COG0110 Acetyltransferases (the isoleucine patch; E=3e-34 PFAM: PF00132; Bacterial transferase hexapeptide (f; E=0.62; maltose O-acetyltransferase 6624207 maa 1795885 maa Rhodopirellula baltica SH 1 maltose O-acetyltransferase NP_870435.1 6623653 D 243090 CDS NP_870436.1 32477442 1792777 complement(6624359..6625243) 1 NC_005027.1 best DB hits: BLAST: pir:A70081; conserved hypothetical protein yxkH - Bacillus subtilis; E=0.24 gb:AAK00156.1; AF222753_11 (AF222753) nodulation; E=0.50 pir:T50960; related to nodulation protein nodB [imported] -; E=0.69 PFAM: PF01522; Polysaccharide deacetylase; E=0.0074; chitooligosaccharide deacetylase 6625243 1792777 RB12316 Rhodopirellula baltica SH 1 chitooligosaccharide deacetylase NP_870436.1 6624359 R 243090 CDS NP_870437.1 32477443 1793673 6625234..6625413 1 NC_005027.1 hypothetical protein 6625413 1793673 RB12317 Rhodopirellula baltica SH 1 hypothetical protein NP_870437.1 6625234 D 243090 CDS NP_870438.1 32477444 1791096 complement(6625398..6625565) 1 NC_005027.1 hypothetical protein 6625565 1791096 RB12318 Rhodopirellula baltica SH 1 hypothetical protein NP_870438.1 6625398 R 243090 CDS NP_870439.1 32477445 1795335 complement(6625514..6626077) 1 NC_005027.1 hypothetical protein 6626077 1795335 RB12319 Rhodopirellula baltica SH 1 hypothetical protein NP_870439.1 6625514 R 243090 CDS NP_870440.1 32477446 1793084 6625565..6625924 1 NC_005027.1 signal peptide 6625924 1793084 RB12320 Rhodopirellula baltica SH 1 signal peptide NP_870440.1 6625565 D 243090 CDS NP_870441.1 32477447 1794597 6626069..6626974 1 NC_005027.1 hypothetical protein 6626974 1794597 RB12321 Rhodopirellula baltica SH 1 hypothetical protein NP_870441.1 6626069 D 243090 CDS NP_870442.1 32477448 1790638 6627001..6627747 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:F75410; conserved hypothetical protein - Deinococcus radiodurans; E=0.084; hypothetical protein 6627747 1790638 RB12323 Rhodopirellula baltica SH 1 hypothetical protein NP_870442.1 6627001 D 243090 CDS NP_870443.1 32477449 1794773 complement(6627713..6627901) 1 NC_005027.1 hypothetical protein 6627901 1794773 RB12324 Rhodopirellula baltica SH 1 hypothetical protein NP_870443.1 6627713 R 243090 CDS NP_870444.1 32477450 1793734 6627940..6629529 1 NC_005027.1 PMID: 7910580 best DB hits: BLAST: swissprot:P50428; ARSA_MOUSE ARYLSULFATASE A PRECURSOR (ASA); E=7e-41 embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=1e-40 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=1e-40 COG: aslA; COG3119 Arylsulfatase A and related enzymes; E=3e-26 PFAM: PF00884; Sulfatase; E=4.1e-39; arylsulfatase 6629529 1793734 RB12325 Rhodopirellula baltica SH 1 arylsulfatase NP_870444.1 6627940 D 243090 CDS NP_870445.1 32477451 1792750 6629618..6631774 1 NC_005027.1 PMID: 11406410 best DB hits: BLAST: gb:AAA98756.1; (L29642) sensor kinase [Pseudomonas fluorescens]; E=2e-45 pir:F83153; probable two-component sensor PA3946 [imported] -; E=3e-36 pir:E83265; probable two-component sensor PA3044 [imported] -; E=2e-35 COG: PA3044; COG0642 Sensory transduction histidine kinases; E=2e-36 PFAM: PF01590; GAF domain; E=3.2e-20 PF00989; PAS domain; E=1.2e-07 PF00512; His Kinase A (phosphoacceptor) d; E=4.8e-16; sensory histidine protein kinase 6631774 1792750 RB12326 Rhodopirellula baltica SH 1 sensory histidine protein kinase NP_870445.1 6629618 D 243090 CDS NP_870446.1 32477452 1793153 complement(6631858..6633918) 1 NC_005027.1 PMID: 8639691 best DB hits: BLAST: swissprot:Q63424; PET2_RAT OLIGOPEPTIDE TRANSPORTER, KIDNEY; E=4e-47 prf:2113198A; Hpeptide cotransporter [Homo sapiens]; E=7e-47 gb:AAF66614.1; AF142441_1 (AF142441) H+oligopeptide symporter; E=1e-46 COG: YKR093w; COG3104 Dipeptide/tripeptide permease; E=2e-24 PFAM: PF00854; POT family; E=6.4e-42; oligopeptide transporter, kidney isoform 6633918 pepT2 1793153 pepT2 Rhodopirellula baltica SH 1 oligopeptide transporter, kidney isoform NP_870446.1 6631858 R 243090 CDS NP_870447.1 32477453 1796143 6633929..6634276 1 NC_005027.1 hypothetical protein 6634276 1796143 RB12328 Rhodopirellula baltica SH 1 hypothetical protein NP_870447.1 6633929 D 243090 CDS NP_870448.1 32477454 1793666 6634234..6634566 1 NC_005027.1 hypothetical protein 6634566 1793666 RB12329 Rhodopirellula baltica SH 1 hypothetical protein NP_870448.1 6634234 D 243090 CDS NP_870449.1 32477455 1794557 6634742..6635035 1 NC_005027.1 hypothetical protein 6635035 1794557 RB12331 Rhodopirellula baltica SH 1 hypothetical protein NP_870449.1 6634742 D 243090 CDS NP_870450.1 32477456 1790576 complement(6635037..6635258) 1 NC_005027.1 hypothetical protein 6635258 1790576 RB12333 Rhodopirellula baltica SH 1 hypothetical protein NP_870450.1 6635037 R 243090 CDS NP_870451.1 32477457 1796842 complement(6635356..6636156) 1 NC_005027.1 best DB hits: BLAST: gb:AAB90905.1; (AE001082) conserved hypothetical protein; E=4e-06 embl:CAB59505.1; (AL132648) hypothetical protein SCI41.35c; E=6e-05 pir:A69209; conserved hypothetical protein MTH816 - Methanobacterium; E=0.001 COG: AF0332_1; COG1994 Zn-dependent proteases; E=6e-06; Zn-dependent protease 6636156 1796842 RB12334 Rhodopirellula baltica SH 1 Zn-dependent protease NP_870451.1 6635356 R 243090 CDS NP_870452.1 32477458 1791314 complement(6636309..6638588) 1 NC_005027.1 PMID: 8370677 best DB hits: BLAST: pir:B75267; prolyl endopeptidase - Deinococcus radiodurans (strain; E=0.0 gb:AAD34991.1; (AF143951) prolyl endopeptidase [Aeromonas; E=1e-173 gb:AAF02211.1; (AF065429) prolyl endopeptidase [Aeromonas; E=1e-173 COG: DR2503; COG1505 Serine proteases of the peptidase S9A; E=0.0 PA1304; COG1770 Protease II (serine protease PtrB); E=7e-45 NMB1877; COG1505 Serine proteases of the peptidase S9A; E=2e-38 PFAM: PF02897; Prolyl oligopeptidase, N-termi; E=2.7e-149 PF00326; Prolyl oligopeptidase; E=2.6e-40; prolyl endopeptidase 6638588 1791314 RB12337 Rhodopirellula baltica SH 1 prolyl endopeptidase NP_870452.1 6636309 R 243090 CDS NP_870453.1 32477459 1789930 complement(6638649..6639182) 1 NC_005027.1 hypothetical protein 6639182 1789930 RB12338 Rhodopirellula baltica SH 1 hypothetical protein NP_870453.1 6638649 R 243090 CDS NP_870454.1 32477460 1793176 complement(6639175..6640056) 1 NC_005027.1 hypothetical protein 6640056 1793176 RB12340 Rhodopirellula baltica SH 1 hypothetical protein NP_870454.1 6639175 R 243090 CDS NP_870455.1 32477461 1793423 complement(6640053..6640721) 1 NC_005027.1 hypothetical protein 6640721 1793423 RB12342 Rhodopirellula baltica SH 1 hypothetical protein NP_870455.1 6640053 R 243090 CDS NP_870456.1 32477462 1795265 complement(6640732..6642447) 1 NC_005027.1 PMID: 1368718 best DB hits: BLAST: swissprot:P76041; SUCP_ECOLI SUCROSE PHOSPHORYLASE; E=1e-123 pir:H64879; probable membrane protein b1309 - Escherichia coli; E=1e-123 ddbj:BAA14878.1; (D90768) Sucrose phosphorylase (EC 2.4.1.7); E=1e-121 COG: ycjM; COG0366 Glycosidases; E=1e-124 PFAM: PF00128; Alpha amylase, catalytic domain; E=0.0025; sucrose phosphorylase 6642447 1795265 RB12343 Rhodopirellula baltica SH 1 sucrose phosphorylase NP_870456.1 6640732 R 243090 CDS NP_870457.1 32477463 1793373 complement(6642444..6643721) 1 NC_005027.1 best DB hits: BLAST: pir:G72278; hypothetical protein - Thermotoga maritima (strain MSB8); E=5e-43 ddbj:BAA25653.1; (AB005901) deduced glucosyltransferase; E=1e-07 pir:F64500; probable hexosyltransferase (EC 2.4.1.-) MJ1607 -; E=7e-05 COG: TM1230; COG0438 Predicted glycosyltransferases; E=5e-44 PFAM: PF02843; Phosphoribosylglycinamide syn; E=0.45 PF00534; Glycosyl transferases group 1; E=0.018; glycosyltransferase 6643721 1793373 RB12344 Rhodopirellula baltica SH 1 glycosyltransferase NP_870457.1 6642444 R 243090 CDS NP_870458.1 32477464 1793607 complement(6643767..6644741) 1 NC_005027.1 PMID: 7826004 best DB hits: BLAST: pir:G75522; hydrolase, CbbYCbbZ/GpH/YieH family - Deinococcus; E=0.045 swissprot:Q94915; REG2_DROME RHYTHMICALLY EXPRESSED GENE 2 PROTEIN; E=0.14 pir:E75169; hypothetical protein PAB2019 - Pyrococcus abyssi (strain; E=0.15 COG: DR0414; COG1011 Predicted hydrolases of the HAD superfamily; E=0.004 PFAM: PF00702; haloacid dehalogenase-like hydrolas; E=2e-07; hydrolase 6644741 1793607 RB12347 Rhodopirellula baltica SH 1 hydrolase NP_870458.1 6643767 R 243090 CDS NP_870459.1 32477465 1797094 complement(6644738..6645520) 1 NC_005027.1 PMID: 10497016 PMID: 11932238 best DB hits: BLAST: pir:E82044; fxsA protein VC2696 [imported] - Vibrio cholerae (group; E=0.013 ddbj:BAB06881.1; (AP001517) BH3162~unknown conserved protein; E=0.14 pir:C70004; conserved hypothetical protein ytzA - Bacillus subtilis; E=0.84 COG: VC2696; COG3030 Uncharacterized ACR; E=0.001; inner membrane protein FxsA 6645520 fxsA 1797094 fxsA Rhodopirellula baltica SH 1 inner membrane protein FxsA NP_870459.1 6644738 R 243090 CDS NP_870460.1 32477466 1792629 6645317..6649282 1 NC_005027.1 PMID: 1646017 best DB hits: BLAST: embl:CAA57910.1; (X82563) c-type cytochrome [Synechocystis sp.]; E=0.77 PFAM: PF00034; Cytochrome c; E=5.6e-05; cytochrome C 6649282 1792629 RB12351 Rhodopirellula baltica SH 1 cytochrome C NP_870460.1 6645317 D 243090 CDS NP_870461.1 32477467 1793377 complement(6649396..6649830) 1 NC_005027.1 PMID: 2651416 best DB hits: BLAST: swissprot:P35539; FLIN_ERWCA FLAGELLAR MOTOR SWITCH PROTEIN FLIN; E=2e-04 swissprot:P15070; FLIN_ECOLI FLAGELLAR MOTOR SWITCH PROTEIN FLIN; E=5e-04 swissprot:P26419; FLIN_SALTY FLAGELLAR MOTOR SWITCH PROTEIN FLIN; E=5e-04 COG: TM0680a; COG1886 Flagellar motor switch/type III secretory pathway; E=2e-06 PFAM: PF01052; Surface presentation of antigens (SP; E=2.3e-07; flagellar motor switch protein fliN [fragment] 6649830 fliN 1793377 fliN Rhodopirellula baltica SH 1 flagellar motor switch protein fliN [fragment] NP_870461.1 6649396 R 243090 CDS NP_870462.1 32477468 1794825 complement(6649876..6650223) 1 NC_005027.1 hypothetical protein 6650223 1794825 RB12359 Rhodopirellula baltica SH 1 hypothetical protein NP_870462.1 6649876 R 243090 CDS NP_870463.1 32477469 1793438 complement(6650263..6651828) 1 NC_005027.1 PMID: 3112519 PMID: 2117666 best DB hits: BLAST: pir:A27286; levanase (EC 3.2.1.65) precursor - Bacillus subtilis; E=3e-54 swissprot:P05656; SACC_BACSU LEVANASE PRECURSOR; E=3e-54 prf:1404371A; levanase [Bacillus subtilis]; E=3e-54 COG: BS_sacC; COG1621 Beta-fructosidases (levanase/invertase); E=3e-55 PFAM: PF00251; Glycosyl hydrolases family 32; E=4.6e-10 PF02012; BNR repeat; E=0.81 PF00251; Glycosyl hydrolases family 32; E=3.1e-15; levanase precursor 6651828 1793438 RB12360 Rhodopirellula baltica SH 1 levanase precursor NP_870463.1 6650263 R 243090 CDS NP_870464.1 32477470 1793368 6651815..6652870 1 NC_005027.1 PMID: 1850730 best DB hits: BLAST: swissprot:Q55480; YZ37_SYNY3 HYPOTHETICAL SUGAR KINASE SLR0537; E=5e-55 gb:AAG10458.1; AF279106_20 (AF279106) predicted ribokinase; E=1e-42 gb:AAK00437.1; AC060755_7 (AC060755) adenosine kinase; E=1e-40 COG: slr0537; COG0524 Sugar kinases, ribokinase; E=4e-56 PFAM: PF00294; pfkB family carbohydrate kinase; E=2.7e-54; ribokinase sugar kinase 6652870 1793368 RB12361 Rhodopirellula baltica SH 1 ribokinase sugar kinase NP_870464.1 6651815 D 243090 CDS NP_870465.1 32477471 1792305 complement(6652962..6653786) 1 NC_005027.1 best DB hits: BLAST: pir:S74867; hypothetical protein sll1159 - Synechocystis sp. (strain; E=2e-23 pir:T36936; hypothetical protein SCJ1.03c - Streptomyces coelicolor; E=1e-17 pir:E72332; thioredoxin peroxidase (EC 1.11.1.-) TM0780 [similarity]; E=1e-05 COG: sll1159; COG1225 Peroxiredoxins; E=2e-24 DR2242; COG0450 Thiol - alkyl hydroperoxide reductases; E=4e-04 bcp; COG1225 Peroxiredoxins; E=4e-04; peroxiredoxin 6653786 1792305 RB12362 Rhodopirellula baltica SH 1 peroxiredoxin NP_870465.1 6652962 R 243090 CDS NP_870466.1 32477472 1792614 complement(6653839..6656202) 1 NC_005027.1 PMID: 8419285 best DB hits: BLAST: gb:AAK05218.1; AE006344_7 (AE006344) ATP-dependent helicase PcrA; E=1e-131 swissprot:Q53727; PCRA_STAAU ATP-DEPENDENT DNA HELICASE PCRA; E=1e-127 swissprot:Q9S3Q0; PCRA_LEUCI ATP-DEPENDENT DNA HELICASE PCRA; E=1e-127 COG: BS_yerF; COG0210 Superfamily I DNA and RNA helicases; E=1e-127 PFAM: PF00580; UvrD/REP helicase; E=2.4e-177; ATP-dependent DNA helicase 6656202 pcrA 1792614 pcrA Rhodopirellula baltica SH 1 ATP-dependent DNA helicase NP_870466.1 6653839 R 243090 CDS NP_870467.1 32477473 1794829 complement(6656322..6658331) 1 NC_005027.1 best DB hits: PFAM: PF00428; 60s Acidic ribosomal protein; E=0.77; hypothetical protein 6658331 1794829 RB12367 Rhodopirellula baltica SH 1 hypothetical protein NP_870467.1 6656322 R 243090 CDS NP_870468.1 32477474 1790808 6658301..6658555 1 NC_005027.1 hypothetical protein 6658555 1790808 RB12371 Rhodopirellula baltica SH 1 hypothetical protein NP_870468.1 6658301 D 243090 CDS NP_870469.1 32477475 1794037 6658702..6659430 1 NC_005027.1 PMID: 7889934 best DB hits: BLAST: ddbj:BAB03982.1; (AP001507) RNA polymerase ECF-type sigma factor; E=4e-15 swissprot:Q45585; SIGW_BACSU RNA POLYMERASE SIGMA FACTOR SIGW; E=3e-13 swissprot:Q06198; RPSH_PSEAE RNA POLYMERASE SIGMA-H FACTOR; E=1e-11 COG: BH0263; COG1595 DNA-directed RNA polymerase specialized sigma; E=4e-16 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=5.4e-10 PF00140; Sigma-70 factor; E=0.53; RNA polymerase ECF-type sigma factor 6659430 1794037 RB12372 Rhodopirellula baltica SH 1 RNA polymerase ECF-type sigma factor NP_870469.1 6658702 D 243090 CDS NP_870470.1 32477476 1792736 6659741..6661081 1 NC_005027.1 best DB hits: PFAM: PF02728; Copper amine oxidase, N3 doma; E=0.86; hypothetical protein 6661081 1792736 RB12375 Rhodopirellula baltica SH 1 hypothetical protein NP_870470.1 6659741 D 243090 CDS NP_870471.1 32477477 1794377 complement(6661109..6661963) 1 NC_005027.1 PMID: 3122846 best DB hits: BLAST: swissprot:P37468; KSGA_BACSU DIMETHYLADENOSINE TRANSFERASE; E=5e-39 ddbj:BAB03776.1; (AP001507) dimethyladenosine transferase; E=3e-38 gb:AAK04788.1; AE006302_6 (AE006302) kasugamycin; E=8e-38 COG: BS_ksgA; COG0030 Dimethyladenosine transferase (rRNA methylation); E=4e-40 PFAM: PF00398; Ribosomal RNA adenine dimethylases; E=4.9e-50; dimethyladenosine transferase 6661963 ksgA 1794377 ksgA Rhodopirellula baltica SH 1 dimethyladenosine transferase NP_870471.1 6661109 R 243090 CDS NP_870472.2 161579025 1796846 complement(6662086..6662760) 1 NC_005027.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 6662760 ribE 1796846 ribE Rhodopirellula baltica SH 1 riboflavin synthase subunit alpha NP_870472.2 6662086 R 243090 CDS NP_870473.1 32477479 1794203 6662966..6664252 1 NC_005027.1 PMID: 8021172 best DB hits: BLAST: ddbj:BAB07275.1; (AP001519) enolase (2-phosphoglycerate; E=1e-144 pir:A41835; phosphopyruvate hydratase (EC 4.2.1.11) - Bacillus; E=1e-139 swissprot:P37869; ENO_BACSU ENOLASE (2-PHOSPHOGLYCERATE; E=1e-139 COG: BH3556; COG0148 Enolase; E=1e-145 PFAM: PF00113; Enol-ase; E=7e-245; enolase 6664252 eno 1794203 eno Rhodopirellula baltica SH 1 enolase NP_870473.1 6662966 D 243090 CDS NP_870474.1 32477480 1790148 complement(6664210..6664485) 1 NC_005027.1 hypothetical protein 6664485 1790148 RB12382 Rhodopirellula baltica SH 1 hypothetical protein NP_870474.1 6664210 R 243090 CDS NP_870475.1 32477481 1794368 complement(6664501..6664767) 1 NC_005027.1 hypothetical protein 6664767 1794368 RB12383 Rhodopirellula baltica SH 1 hypothetical protein NP_870475.1 6664501 R 243090 CDS NP_870476.1 32477482 1792591 6664867..6665670 1 NC_005027.1 hypothetical protein 6665670 1792591 RB12385 Rhodopirellula baltica SH 1 hypothetical protein NP_870476.1 6664867 D 243090 CDS NP_870477.1 32477483 1790277 6665667..6665852 1 NC_005027.1 hypothetical protein 6665852 1790277 RB12386 Rhodopirellula baltica SH 1 hypothetical protein NP_870477.1 6665667 D 243090 CDS NP_870478.1 32477484 1792287 complement(6665742..6665894) 1 NC_005027.1 hypothetical protein 6665894 1792287 RB12387 Rhodopirellula baltica SH 1 hypothetical protein NP_870478.1 6665742 R 243090 CDS NP_870479.1 32477485 1791238 complement(6665905..6667206) 1 NC_005027.1 best DB hits: BLAST: gb:AAD45539.1; U70376_1 (U70376) InsA [Streptomyces netropsis]; E=5e-33 gb:AAG60893.1; AF322013_12 (AF322013) ID460 [Bradyrhizobium; E=8e-33 ddbj:BAA19966.1; (D63923) transposase [Acetobacter pasteurianus]; E=1e-26; transposase 6667206 1791238 RB12388 Rhodopirellula baltica SH 1 transposase NP_870479.1 6665905 R 243090 CDS NP_870480.1 32477486 1795705 complement(6667344..6668063) 1 NC_005027.1 signal peptide 6668063 1795705 RB12390 Rhodopirellula baltica SH 1 signal peptide NP_870480.1 6667344 R 243090 CDS NP_870481.1 32477487 1794818 complement(6668003..6668407) 1 NC_005027.1 hypothetical protein 6668407 1794818 RB12391 Rhodopirellula baltica SH 1 hypothetical protein NP_870481.1 6668003 R 243090 CDS NP_870482.1 32477488 1793772 complement(6668436..6668543) 1 NC_005027.1 hypothetical protein 6668543 1793772 RB12392 Rhodopirellula baltica SH 1 hypothetical protein NP_870482.1 6668436 R 243090 CDS NP_870483.1 32477489 1793650 complement(6668555..6670561) 1 NC_005027.1 best DB hits: BLAST: gb:AAD05531.1; (AF083240) c-type cytochrome precursor [Shewanella; E=0.013; c-type cytochrome precursor 6670561 1793650 RB12393 Rhodopirellula baltica SH 1 c-type cytochrome precursor NP_870483.1 6668555 R 243090 CDS NP_870484.1 32477490 1793981 complement(6670572..6670730) 1 NC_005027.1 hypothetical protein 6670730 1793981 RB12395 Rhodopirellula baltica SH 1 hypothetical protein NP_870484.1 6670572 R 243090 CDS NP_870485.1 32477491 1796919 complement(6670697..6670870) 1 NC_005027.1 hypothetical protein 6670870 1796919 RB12396 Rhodopirellula baltica SH 1 hypothetical protein NP_870485.1 6670697 R 243090 CDS NP_870486.1 32477492 1795322 complement(6670928..6672013) 1 NC_005027.1 hypothetical protein 6672013 1795322 RB12398 Rhodopirellula baltica SH 1 hypothetical protein NP_870486.1 6670928 R 243090 CDS NP_870487.1 32477493 1794375 complement(6672196..6673551) 1 NC_005027.1 best DB hits: BLAST: pir:G70414; conserved hypothetical protein aq_1327 - Aquifex; E=1e-08 pir:G72297; conserved hypothetical protein - Thermotoga maritima; E=5e-08 pir:T34718; probable integral membrane protein - Streptomyces; E=9e-07 COG: aq_1327; COG0705 Uncharacterized membrane protein (homolog of; E=1e-09 PFAM: PF01694; Rhomboid family; E=3.1e-12; hypothetical protein 6673551 1794375 RB12400 Rhodopirellula baltica SH 1 hypothetical protein NP_870487.1 6672196 R 243090 CDS NP_870488.1 32477494 1790012 complement(6673562..6673741) 1 NC_005027.1 hypothetical protein 6673741 1790012 RB12403 Rhodopirellula baltica SH 1 hypothetical protein NP_870488.1 6673562 R 243090 CDS NP_870489.1 32477495 1791291 complement(6673728..6674021) 1 NC_005027.1 hypothetical protein 6674021 1791291 RB12404 Rhodopirellula baltica SH 1 hypothetical protein NP_870489.1 6673728 R 243090 CDS NP_870490.1 32477496 1791004 6674037..6675587 1 NC_005027.1 PMID: 3311747 best DB hits: BLAST: gb:AAG57155.1; AE005436_2 (AE005436) nucleoside permease; E=5e-53 swissprot:P76417; YEGT_ECOLI NUCLEOSIDE TRANSPORTER YEGT; E=8e-53 pir:C65082; nucleoside-transporting protein nupG - Escherichia coli; E=6e-30 COG: yegT; COG0477 Permeases of the major facilitator superfamily; E=7e-54; nucleoside-transport system protein 6675587 nupG 1791004 nupG Rhodopirellula baltica SH 1 nucleoside-transport system protein NP_870490.1 6674037 D 243090 CDS NP_870491.1 32477497 1795889 complement(6675588..6675797) 1 NC_005027.1 hypothetical protein 6675797 1795889 RB12407 Rhodopirellula baltica SH 1 hypothetical protein NP_870491.1 6675588 R 243090 CDS NP_870492.1 32477498 1795545 6675635..6675814 1 NC_005027.1 hypothetical protein 6675814 1795545 RB12408 Rhodopirellula baltica SH 1 hypothetical protein NP_870492.1 6675635 D 243090 CDS NP_870493.1 32477499 1795691 6675757..6678855 1 NC_005027.1 PMID: 10216867 best DB hits: BLAST: gb:AAD30859.1; AF116251_2 (AF116251) BatB [Bacteroides fragilis]; E=0.007; hypothetical protein 6678855 1795691 RB12409 Rhodopirellula baltica SH 1 hypothetical protein NP_870493.1 6675757 D 243090 CDS NP_870494.1 32477500 1792919 6678852..6679049 1 NC_005027.1 signal peptide 6679049 1792919 RB12414 Rhodopirellula baltica SH 1 signal peptide NP_870494.1 6678852 D 243090 CDS NP_870495.1 32477501 1790629 complement(6679150..6679572) 1 NC_005027.1 PMID: 10484179 best DB hits: BLAST: gb:AAG18715.1; (AE004976) Vng0080h [Halobacterium sp. NRC-1]; E=2e-04 ddbj:BAB07426.1; (AP001519) acetobutylicum phosphotransbutyrylase; E=0.005; hypothetical protein 6679572 1790629 RB12415 Rhodopirellula baltica SH 1 hypothetical protein NP_870495.1 6679150 R 243090 CDS NP_870496.1 32477502 1792932 6679578..6680456 1 NC_005027.1 signal peptide 6680456 1792932 RB12416 Rhodopirellula baltica SH 1 signal peptide NP_870496.1 6679578 D 243090 CDS NP_870497.1 32477503 1793180 6680453..6680932 1 NC_005027.1 PMID: 1567863 best DB hits: BLAST: pir:S20974; hypothetical protein 178 - Escherichia coli; E=4e-34 swissprot:P30134; YFHC_ECOLI HYPOTHETICAL 20.0 KD PROTEIN IN; E=4e-34 gb:AAG57673.1; AE005486_4 (AE005486) deaminase; E=4e-34 COG: yfhC; COG0590 Cytosine/adenosine deaminases; E=4e-35 PFAM: PF00383; Cytidine and deoxycytidylate de; E=1.7e-37; cytosine deaminase 6680932 1793180 RB12419 Rhodopirellula baltica SH 1 cytosine deaminase NP_870497.1 6680453 D 243090 CDS NP_870498.1 32477504 1795850 6680963..6682504 1 NC_005027.1 PMID: 2065652 PMID: 1905979 best DB hits: BLAST: gb:AAF82144.1; AC034256_8 (AC034256) Contains similarity to F-box; E=3e-15 gb:AAG17034.1; AF187980_1 (AF187980) Partner of Paired [Drosophila; E=8e-09 embl:CAB95333.1; (AL359782) possible adenylate cyclase; E=2e-06; adenylate cyclase 6682504 1795850 RB12421 Rhodopirellula baltica SH 1 adenylate cyclase NP_870498.1 6680963 D 243090 CDS NP_870499.1 32477505 1792694 6682504..6683076 1 NC_005027.1 PMID: 12004073; hypothetical protein 6683076 1792694 RB12422 Rhodopirellula baltica SH 1 hypothetical protein NP_870499.1 6682504 D 243090 CDS NP_870500.1 32477506 1792546 6683073..6684026 1 NC_005027.1 PMID: 1550672 best DB hits: BLAST: pir:A82682; ion transporter XF1426 [imported] - Xylella fastidiosa; E=1e-48 pir:E75470; probable ion transporter - Deinococcus radiodurans; E=5e-42 pir:B83459; probable potassium channel PA1496 [imported] -; E=1e-36 COG: XF1426; COG1226 Kef-type K+ transport systems, predicted NAD-binding; E=1e-49 APE0955; COG1226 Kef-type K+ transport systems, predicted; E=7e-09 BH3340; COG1226 Kef-type K+ transport systems, predicted NAD-binding; E=4e-05 PFAM: PF01145; SPFH domain / Band 7 family; E=0.42 PF00520; Ion transport protein; E=5.1e-21; potassium channel 6684026 1792546 RB12424 Rhodopirellula baltica SH 1 potassium channel NP_870500.1 6683073 D 243090 CDS NP_870501.1 32477507 1791251 6684059..6684472 1 NC_005027.1 hypothetical protein 6684472 1791251 RB12426 Rhodopirellula baltica SH 1 hypothetical protein NP_870501.1 6684059 D 243090 CDS NP_870502.1 32477508 1793261 complement(6684475..6684645) 1 NC_005027.1 hypothetical protein 6684645 1793261 RB12427 Rhodopirellula baltica SH 1 hypothetical protein NP_870502.1 6684475 R 243090 CDS NP_870503.1 32477509 1792758 complement(6684618..6685586) 1 NC_005027.1 PMID: 9537320 best DB hits: BLAST: pir:B70374; conserved hypothetical protein aq_854 - Aquifex aeolicus; E=0.20 pir:E69078; conserved hypothetical protein MTH1585 -; E=0.34 ddbj:BAB05388.1; (AP001512) BH1669~unknown conserved protein; E=0.58 PFAM: PF00515; TPR Domain; E=0.15; hypothetical protein 6685586 1792758 RB12428 Rhodopirellula baltica SH 1 hypothetical protein NP_870503.1 6684618 R 243090 CDS NP_870504.1 32477510 1789966 6685569..6686255 1 NC_005027.1 hypothetical protein 6686255 1789966 RB12429 Rhodopirellula baltica SH 1 hypothetical protein NP_870504.1 6685569 D 243090 CDS NP_870505.1 32477511 1796768 complement(6686283..6687857) 1 NC_005027.1 PMID: [EscherichiacoliO157:H7] best DB hits: BLAST: gb:AAF32278.1; (AF211192) SULF1 [Drosophila melanogaster]; E=7e-13 gb:AAG58881.1; AE005599_13 (AE005599) sulfatase; E=1e-12 gb:AAF55296.1; (AE003712) Sulf1 gene product [Drosophila; E=8e-12 COG: PA0031; COG3119 Arylsulfatase A and related enzymes; E=3e-12 PFAM: PF00884; Sulfatase; E=5.6e-14; sulfatase 6687857 1796768 RB12431 Rhodopirellula baltica SH 1 sulfatase NP_870505.1 6686283 R 243090 CDS NP_870506.1 32477512 1789969 complement(6687862..6689526) 1 NC_005027.1 PMID: 7910580 best DB hits: BLAST: swissprot:P50428; ARSA_MOUSE ARYLSULFATASE A PRECURSOR (ASA); E=5e-36 gb:AAC27821.1; (AF013158) arylsulfatase [Heliocidaris; E=7e-36 embl:CAA34667.1; (X16679) arylsulfatase [Hemicentrotus; E=1e-35 COG: aslA; COG3119 Arylsulfatase A and related enzymes; E=8e-28 PAB0793; COG2194 Predicted membrane-associated, metal-dependent; E=0.001 VNG1337C; COG3119 Arylsulfatase A and related enzymes; E=0.004 PFAM: PF00884; Sulfatase; E=2.2e-39; arylsulfatase 6689526 1789969 RB12432 Rhodopirellula baltica SH 1 arylsulfatase NP_870506.1 6687862 R 243090 CDS NP_870507.1 32477513 1794813 complement(6689629..6691671) 1 NC_005027.1 PMID: 9083067 best DB hits: BLAST: gb:AAF55179.1; (AE003708) CG5038 gene product [Drosophila; E=5e-28 swissprot:P56558; OGT1_RAT UDP-N-ACETYLGLUCOSAMINE--PEPTIDE; E=3e-27 gb:AAD38597.1; AF145622_1 (AF145622) BcDNA.GH04245 [Drosophila; E=2e-25 COG: MTH83; COG0457 TPR-repeat-containing proteins; E=2e-20 PFAM: PF00515; TPR Domain; E=6.4e-07; O-GlcNAc transferase 6691671 ogt 1794813 ogt Rhodopirellula baltica SH 1 O-GlcNAc transferase NP_870507.1 6689629 R 243090 CDS NP_870508.1 32477514 1794586 complement(6691668..6693116) 1 NC_005027.1 PMID: 7743991 best DB hits: BLAST: pir:E69992; conserved hypothetical protein ytgD - Bacillus subtilis; E=3e-41 ddbj:BAB05109.1; (AP001511) BH1390~unknown conserved protein in; E=2e-32 gb:AAD56938.1; AF180520_3 (AF180520) integral membrane protein; E=3e-28 COG: BS_ytgD; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease; E=3e-42 Rv2788; COG1321 Mn-dependent transcriptional regulator; E=3e-10 BH1395; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease; E=5e-10 PFAM: PF00950; ABC 3 transport family; E=1.1e-17 PF02742; Iron dependent repressor, metal; E=2.9e-10; manganese ABC transporter permease 6693116 mntB 1794586 mntB Rhodopirellula baltica SH 1 manganese ABC transporter permease NP_870508.1 6691668 R 243090 CDS NP_870509.1 32477515 1791749 complement(6693113..6694447) 1 NC_005027.1 PMID: 7743991 best DB hits: BLAST: pir:D69992; ABC transporter (membrane protein) homolog ytgC -; E=8e-45 pir:B71357; probable ABC transporter, permease (troC) -; E=5e-22 pir:A72089; integral membrane protein - Chlamydophila pneumoniae; E=4e-21 COG: BS_ytgC; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease; E=8e-46 CPn0347_2; COG1321 Mn-dependent transcriptional regulator; E=2e-07 TM0125; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease; E=3e-07 PFAM: PF00950; ABC 3 transport family; E=1.6e-72 PF02742; Iron dependent repressor, metal; E=1.6e-07; manganese ABC transporter permease 6694447 mntB 1791749 mntB Rhodopirellula baltica SH 1 manganese ABC transporter permease NP_870509.1 6693113 R 243090 CDS NP_870510.1 32477516 1793600 complement(6694447..6695289) 1 NC_005027.1 PMID: 7743991 best DB hits: BLAST: pir:C69992; ABC transporter (ATP-binding protein) homolog ytgB -; E=3e-73 pir:A71357; probable ABC transporter ATP-binding protein (troB) -; E=1e-70 pir:T45470; ATP-binding ABC transport protein [imported] -; E=9e-58 COG: BS_ytgB; COG1121 ABC-type Mn/Zn transport systems, ATPase component; E=3e-74 BS_yfmF; COG1120 ABC-type cobalamin/Fe3+-siderophores transport; E=8e-24 PH1653; COG1121 ABC-type Mn/Zn transport systems, ATPase component; E=5e-23 PFAM: PF02463; SMC domain N terminal domain; E=0.17 PF00005; ABC transporter; E=7.9e-50; manganese transport system ATP-binding protein 6695289 mntA 1793600 mntA Rhodopirellula baltica SH 1 manganese transport system ATP-binding protein NP_870510.1 6694447 R 243090 CDS NP_870511.1 32477517 1792753 complement(6695437..6695571) 1 NC_005027.1 hypothetical protein 6695571 1792753 RB12439 Rhodopirellula baltica SH 1 hypothetical protein NP_870511.1 6695437 R 243090 CDS NP_870512.1 32477518 1790406 complement(6695599..6696699) 1 NC_005027.1 PMID: 7743991 best DB hits: BLAST: pir:B69992; ABC transporter (membrane protein) homolog ytgA -; E=7e-66 pdb:1TOA; A Chain A, Periplasmic Zinc Binding Protein Troa From; E=3e-50 gb:AAA92353.1; (U16363) Tromp1 [Treponema pallidum]; E=3e-50 COG: BS_ytgA; COG0803 ABC-type Mn/Zn transport system, periplasmic; E=7e-67 PFAM: PF01297; Periplasmic solute binding prot; E=3.6e-103; manganese ABC transporter substrate binding protein 6696699 mtsA 1790406 mtsA Rhodopirellula baltica SH 1 manganese ABC transporter substrate binding protein NP_870512.1 6695599 R 243090 CDS NP_870513.1 32477519 1791237 complement(6696666..6697445) 1 NC_005027.1 PMID: 9694840 best DB hits: BLAST: pir:G69041; mutator MutT protein - Methanobacterium; E=3e-07 swissprot:Q58549; ADPP_METJA ADP-RIBOSE PYROPHOSPHATASE; E=9e-07 embl:CAC12694.1; (AJ272115) hypothetical protein [Thauera; E=2e-06 COG: MTH1315; COG1051 ADP-ribose pyrophosphatase; E=3e-08 BH1893; COG0494 NTP pyrophosphohydrolases including oxidative damage; E=3e-07 VC0331; COG2816 NTP pyrophosphohydrolases containing a Zn-finger,; E=3e-06 PFAM: PF01165; Ribosomal protein S21; E=0.52 PF00293; MutT-like domain; E=1e-25; ADP-ribose pyrophosphatase 6697445 nudF 1791237 nudF Rhodopirellula baltica SH 1 ADP-ribose pyrophosphatase NP_870513.1 6696666 R 243090 CDS NP_870514.1 32477520 1796898 complement(6697442..6698977) 1 NC_005027.1 hypothetical protein 6698977 1796898 RB12442 Rhodopirellula baltica SH 1 hypothetical protein NP_870514.1 6697442 R 243090 CDS NP_870515.1 32477521 1793410 6698983..6699558 1 NC_005027.1 hypothetical protein 6699558 1793410 RB12444 Rhodopirellula baltica SH 1 hypothetical protein NP_870515.1 6698983 D 243090 CDS NP_870516.1 32477522 1795298 6699486..6700223 1 NC_005027.1 PMID: 2017365 best DB hits: BLAST: pir:T36663; protein kinase, transmembrane - Streptomyces coelicolor; E=8e-28 pir:B81173; thymidylate kinase NMB0670 [imported] - Neisseria; E=1e-27 pir:H81932; probable dTMP kinase (EC 2.7.4.9) NMA0869 [imported] -; E=3e-27 COG: NMB0670; COG0125 Thymidylate kinase; E=1e-28 PFAM: PF02223; Thymidylate kinase; E=1.3e-62; thymidylate kinase 6700223 tmk 1795298 tmk Rhodopirellula baltica SH 1 thymidylate kinase NP_870516.1 6699486 D 243090 CDS NP_870517.1 32477523 1793932 6700272..6700583 1 NC_005027.1 hypothetical protein 6700583 1793932 RB12447 Rhodopirellula baltica SH 1 hypothetical protein NP_870517.1 6700272 D 243090 CDS NP_870518.1 32477524 1794413 complement(6700689..6701000) 1 NC_005027.1 signal peptide 6701000 1794413 RB12449 Rhodopirellula baltica SH 1 signal peptide NP_870518.1 6700689 R 243090 CDS NP_870519.1 32477525 1789975 complement(6701097..6701561) 1 NC_005027.1 signal peptide 6701561 1789975 RB12450 Rhodopirellula baltica SH 1 signal peptide NP_870519.1 6701097 R 243090 CDS NP_870520.1 32477526 1791125 complement(6701635..6702552) 1 NC_005027.1 hypothetical protein 6702552 1791125 RB12451 Rhodopirellula baltica SH 1 hypothetical protein NP_870520.1 6701635 R 243090 CDS NP_870521.1 32477527 1793707 complement(6702485..6702946) 1 NC_005027.1 hypothetical protein 6702946 1793707 RB12452 Rhodopirellula baltica SH 1 hypothetical protein NP_870521.1 6702485 R 243090 CDS NP_870522.1 32477528 1792820 complement(6703048..6703647) 1 NC_005027.1 hypothetical protein 6703647 1792820 RB12454 Rhodopirellula baltica SH 1 hypothetical protein NP_870522.1 6703048 R 243090 CDS NP_870523.1 32477529 1795019 complement(6703744..6704238) 1 NC_005027.1 hypothetical protein 6704238 1795019 RB12455 Rhodopirellula baltica SH 1 hypothetical protein NP_870523.1 6703744 R 243090 CDS NP_870524.1 32477530 1792913 complement(6704266..6704664) 1 NC_005027.1 PMID: 8132648 best DB hits: BLAST: pir:B53522; 20k cyclophilin - Toxoplasma gondii (fragment) -----; E=0.056; cyclophilin 6704664 1792913 RB12456 Rhodopirellula baltica SH 1 cyclophilin NP_870524.1 6704266 R 243090 CDS NP_870525.1 32477531 1793022 6704719..6704976 1 NC_005027.1 hypothetical protein 6704976 1793022 RB12458 Rhodopirellula baltica SH 1 hypothetical protein NP_870525.1 6704719 D 243090 CDS NP_870526.1 32477532 1794733 complement(6705119..6706069) 1 NC_005027.1 PMID: 8300537 best DB hits: BLAST: pir:D82385; mannitol operon repressor VCA1047 [imported] - Vibrio; E=6e-04 gb:AAD45387.1; AF166095_3 (AF166095) mtl operon repressor; E=0.12 swissprot:P36563; MTLR_ECOLI MANNITOL OPERON REPRESSOR (MANNITOL; E=0.28; mannitol operon repressor 6706069 1794733 RB12459 Rhodopirellula baltica SH 1 mannitol operon repressor NP_870526.1 6705119 R 243090 CDS NP_870527.1 32477533 1795260 complement(6706103..6707170) 1 NC_005027.1 hypothetical protein 6707170 1795260 RB12460 Rhodopirellula baltica SH 1 hypothetical protein NP_870527.1 6706103 R 243090 CDS NP_870528.1 32477534 1796894 complement(6707206..6708942) 1 NC_005027.1 best DB hits: PFAM: PF02205; WH2 motif; E=0.86; signal peptide 6708942 1796894 RB12461 Rhodopirellula baltica SH 1 signal peptide NP_870528.1 6707206 R 243090 CDS NP_870529.1 32477535 1792656 complement(6709081..6710172) 1 NC_005027.1 PMID: 10952301 best DB hits: BLAST: pir:C82490; probable potassium channel protein VCA0194 [imported] -; E=0.039 COG: VCA0194; COG1226 Kef-type K+ transport systems, predicted; E=0.004; potassium channel protein 6710172 1792656 RB12464 Rhodopirellula baltica SH 1 potassium channel protein NP_870529.1 6709081 R 243090 CDS NP_870530.1 32477536 1792377 complement(6710136..6712169) 1 NC_005027.1 best DB hits: PFAM: PF00520; Ion transport protein; E=1.8e-05 PF01578; Cytochrome C assembly protein; E=0.81; signal peptide 6712169 1792377 RB12468 Rhodopirellula baltica SH 1 signal peptide NP_870530.1 6710136 R 243090 CDS NP_870531.1 32477537 1796840 complement(6712185..6712442) 1 NC_005027.1 hypothetical protein 6712442 1796840 RB12471 Rhodopirellula baltica SH 1 hypothetical protein NP_870531.1 6712185 R 243090 CDS NP_870532.1 32477538 1792254 6712524..6712706 1 NC_005027.1 hypothetical protein 6712706 1792254 RB12473 Rhodopirellula baltica SH 1 hypothetical protein NP_870532.1 6712524 D 243090 CDS NP_870533.1 32477539 1796792 6712706..6715966 1 NC_005027.1 hypothetical protein 6715966 1796792 RB12475 Rhodopirellula baltica SH 1 hypothetical protein NP_870533.1 6712706 D 243090 CDS NP_870534.1 32477540 1796816 6716008..6717072 1 NC_005027.1 hypothetical protein 6717072 1796816 RB12477 Rhodopirellula baltica SH 1 hypothetical protein NP_870534.1 6716008 D 243090 CDS NP_870535.1 32477541 1792605 complement(6716985..6717557) 1 NC_005027.1 hypothetical protein 6717557 1792605 RB12479 Rhodopirellula baltica SH 1 hypothetical protein NP_870535.1 6716985 R 243090 CDS NP_870536.1 32477542 1792440 complement(6717554..6718774) 1 NC_005027.1 PMID: 9297088 best DB hits: BLAST: ddbj:BAB05275.1; (AP001512) GTP cyclohydrolase II 3,; E=1e-106 swissprot:P51695; GCH2_BACAM RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBA; E=1e-103 swissprot:P17620; GCH2_BACSU RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBA; E=1e-103 COG: BH1556_2; COG0807 GTP cyclohydrolase II; E=7e-51 BH1556_1; COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase; E=2e-48 ribA; COG0807 GTP cyclohydrolase II; E=2e-48 PFAM: PF00926; 3,4-dihydroxy-2-butanone 4-ph; E=5.7e-83 PF00925; GTP cyclohydrolase II; E=2.5e-89; riboflavin biosynthesis protein RibA 6718774 ribA 1792440 ribA Rhodopirellula baltica SH 1 riboflavin biosynthesis protein RibA NP_870536.1 6717554 R 243090 CDS NP_870537.1 32477543 1795288 6718870..6720036 1 NC_005027.1 PMID: 1907455 best DB hits: BLAST: pir:B75555; probable lipaseesterase - Deinococcus radiodurans; E=1e-19 pdb:1EVQ; A Chain A, The Crystal Structure Of The Thermophilic; E=6e-12 pir:H70731; probable esterase - Mycobacterium tuberculosis (strain; E=5e-11 COG: DR0133; COG0657 Acetyl esterase; E=1e-20 XF2260; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; E=1e-04 aes; COG0657 Acetyl esterase; E=5e-04; lipase/esterase 6720036 1795288 RB12482 Rhodopirellula baltica SH 1 lipase/esterase NP_870537.1 6718870 D 243090 CDS NP_870538.1 32477544 1794602 complement(6720078..6721052) 1 NC_005027.1 best DB hits: PFAM: PF00892; Integral membrane protein DUF6; E=0.67; hypothetical protein 6721052 1794602 RB12484 Rhodopirellula baltica SH 1 hypothetical protein NP_870538.1 6720078 R 243090 CDS NP_870539.1 32477545 1791432 6720957..6721193 1 NC_005027.1 hypothetical protein 6721193 1791432 RB12485 Rhodopirellula baltica SH 1 hypothetical protein NP_870539.1 6720957 D 243090 CDS NP_870540.1 32477546 1790045 6721197..6722753 1 NC_005027.1 PMID: 7768349 best DB hits: BLAST: pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=4e-44 pir:T36717; probable serinethreonine protein kinase - Streptomyces; E=4e-40 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=2e-39 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=4e-45 PFAM: PF00069; Protein kinase domain; E=1.7e-55; serine/threonine protein kinase 6722753 1790045 RB12486 Rhodopirellula baltica SH 1 serine/threonine protein kinase NP_870540.1 6721197 D 243090 CDS NP_870541.1 32477547 1792742 complement(6722743..6724590) 1 NC_005027.1 hypothetical protein 6724590 1792742 RB12487 Rhodopirellula baltica SH 1 hypothetical protein NP_870541.1 6722743 R 243090 CDS NP_870542.1 32477548 1795511 6724867..6725928 1 NC_005027.1 best DB hits: PFAM: PF02537; CrcB-like protein; E=0.22; signal peptide 6725928 1795511 RB12489 Rhodopirellula baltica SH 1 signal peptide NP_870542.1 6724867 D 243090 CDS NP_870543.1 32477549 1794076 complement(6725922..6726260) 1 NC_005027.1 hypothetical protein 6726260 1794076 RB12492 Rhodopirellula baltica SH 1 hypothetical protein NP_870543.1 6725922 R 243090 CDS NP_870544.1 32477550 1790216 complement(6726361..6728091) 1 NC_005027.1 PMID: 1828465 best DB hits: BLAST: ddbj:BAB06171.1; (AP001515) BH2452~unknown conserved protein; E=0.067 pir:T14405; small GTP-binding protein rab-1 - turnip ----- gb:; E=0.076 swissprot:P23451; FLIK_BACSU PROBABLE FLAGELLAR HOOK-LENGTH; E=0.082 COG: BH2452; COG3144 Flagellar hook-length control protein; E=0.006; flagellar hook-length control protein FliK 6728091 fliK 1790216 fliK Rhodopirellula baltica SH 1 flagellar hook-length control protein FliK NP_870544.1 6726361 R 243090 CDS NP_870545.1 32477551 1796848 complement(6728092..6728742) 1 NC_005027.1 best DB hits: PFAM: PF02895; Signal transducing histidine kin; E=0.61; hypothetical protein 6728742 1796848 RB12497 Rhodopirellula baltica SH 1 hypothetical protein NP_870545.1 6728092 R 243090 CDS NP_870546.1 32477552 1790509 complement(6728739..6729221) 1 NC_005027.1 PMID: 1904439 best DB hits: BLAST: swissprot:P20487; FLIJ_BACSU FLAGELLAR FLIJ PROTEIN (CHEMOTAXIS; E=0.012 COG: BS_fliJ; COG2882 Flagellar biosynthesis chaperone; E=0.001; flagellar FliJ protein 6729221 fliJ 1790509 fliJ Rhodopirellula baltica SH 1 flagellar FliJ protein NP_870546.1 6728739 R 243090 CDS NP_870547.1 32477553 1793258 complement(6729263..6730666) 1 NC_005027.1 PMID: 1828465 best DB hits: BLAST: pir:D72404; flagellum-specific ATP synthase - Thermotoga maritima; E=1e-108 ddbj:BAB06174.1; (AP001515) flagellar-specific ATP synthase; E=1e-106 swissprot:P23445; FLII_BACSU FLAGELLUM-SPECIFIC ATP SYNTHASE; E=1e-103 COG: TM0218; COG1157 Flagellar biosynthesis/type III secretory pathway; E=1e-109 atpD; COG0055 F0F1-type ATP synthase beta subunit; E=2e-37 PFAM: PF00005; ABC transporter; E=0.024 PF00006; ATP synthase alpha/beta family,; E=4e-131; flagellum-specific ATP synthase 6730666 fliI 1793258 fliI Rhodopirellula baltica SH 1 flagellum-specific ATP synthase NP_870547.1 6729263 R 243090 CDS NP_870548.1 32477554 1792684 complement(6730663..6731535) 1 NC_005027.1 best DB hits: PFAM: PF02361; Cobalt transport protein; E=0.17; hypothetical protein 6731535 1792684 RB12501 Rhodopirellula baltica SH 1 hypothetical protein NP_870548.1 6730663 R 243090 CDS NP_870549.1 32477555 1793415 complement(6731537..6732844) 1 NC_005027.1 PMID: 10440379 best DB hits: BLAST: swissprot:Q9WY63; FLIG_THEMA FLAGELLAR MOTOR SWITCH PROTEIN FLIG; E=7e-08 pir:G71328; probable flagellar motor switch protein (fliG-2) -; E=6e-07 gb:AAF35852.1; AF220006_1 (AF220006) lateral flagellar motor; E=2e-06 COG: TM0220; COG1536 Flagellar motor switch protein; E=7e-09; flagellar motor switch protein FliG 6732844 fliG 1793415 fliG Rhodopirellula baltica SH 1 flagellar motor switch protein FliG NP_870549.1 6731537 R 243090 CDS NP_870550.1 32477556 1791880 complement(6732841..6733089) 1 NC_005027.1 hypothetical protein 6733089 1791880 RB12504 Rhodopirellula baltica SH 1 hypothetical protein NP_870550.1 6732841 R 243090 CDS NP_870551.1 32477557 1791759 6733068..6733505 1 NC_005027.1 PMID: 9266669 best DB hits: BLAST: ddbj:BAB05255.1; (AP001512) anti-sigma F factor antagonist (stage; E=0.003 pir:S75220; hypothetical protein slr1912 - Synechocystis sp. (strain; E=0.024 COG: BH1536; COG1366 Anti-anti-sigma regulatory factor (antagonist of; E=3e-04 PFAM: PF01740; STAS domain; E=4.9e-06; anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 6733505 1791759 RB12506 Rhodopirellula baltica SH 1 anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) NP_870551.1 6733068 D 243090 CDS NP_870552.1 32477558 1793966 6733502..6734209 1 NC_005027.1 PMID: 1528845 best DB hits: BLAST: pir:T30898; receptor-like histidine kinase - Rhodococcus erythropolis; E=6e-08 pir:T28694; hypothetical protein - Streptomyces coelicolor -----; E=1e-07 pir:T28655; receptor-like histidine kinase BpdS - Rhodococcus sp; E=2e-07 COG: narQ; COG0642 Sensory transduction histidine kinases; E=2e-08 PFAM: PF02518; Histidine kinase-, DNA gyrase B-, p; E=1.9e-05; two-component sensor histidine kinase 6734209 1793966 RB12509 Rhodopirellula baltica SH 1 two-component sensor histidine kinase NP_870552.1 6733502 D 243090 CDS NP_870553.1 32477559 1794166 complement(6734262..6735314) 1 NC_005027.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 6735314 aroG 1794166 aroG Rhodopirellula baltica SH 1 phospho-2-dehydro-3-deoxyheptonate aldolase NP_870553.1 6734262 R 243090 CDS NP_870554.1 32477560 1792400 complement(6735460..6736584) 1 NC_005027.1 PMID: 11016950 best DB hits: BLAST: gb:AAG18715.1; (AE004976) Vng0080h [Halobacterium sp. NRC-1]; E=0.018; hypothetical protein 6736584 1792400 RB12511 Rhodopirellula baltica SH 1 hypothetical protein NP_870554.1 6735460 R 243090 CDS NP_870555.1 32477561 1793825 complement(6736607..6739042) 1 NC_005027.1 PMID: 10368149 best DB hits: BLAST: gb:AAD24206.1; AF049342_4 (AF049342) flagellar hook protein FlgE; E=8e-22 gb:AAA61738.1; (U19712) flagellar hook polypeptide [Borrelia; E=1e-21 gb:AAA91361.1; (U12870) flagellar distal rod protein [Borrelia; E=3e-21 COG: BB0283; COG1749 Flagellar basal body and hook proteins; E=5e-22 PFAM: PF00460; Flagella basal body rod protein; E=3.7e-10; flagellar hook protein FlgE 6739042 flgE 1793825 flgE Rhodopirellula baltica SH 1 flagellar hook protein FlgE NP_870555.1 6736607 R 243090 CDS NP_870556.1 32477562 1790957 complement(6739123..6739617) 1 NC_005027.1 PMID: 8049271 best DB hits: BLAST: gb:AAG25963.1; AF300968_5 (AF300968) FlgD [Sinorhizobium meliloti]; E=2e-05 gb:AAF14369.1; AF133240_3 (AF133240) flagellar scaffolding protein; E=3e-05 gb:AAA97475.1; (U51896) LfgD [Vibrio parahaemolyticus]; E=4e-05 COG: PA1079; COG1843 Flagellar hook capping protein; E=8e-06; basal-body rod modification protein FlgD 6739617 flgD 1790957 flgD Rhodopirellula baltica SH 1 basal-body rod modification protein FlgD NP_870556.1 6739123 R 243090 CDS NP_870557.1 32477563 1791554 6739496..6741055 1 NC_005027.1 hypothetical protein 6741055 1791554 RB12516 Rhodopirellula baltica SH 1 hypothetical protein NP_870557.1 6739496 D 243090 CDS NP_870558.1 32477564 1790915 6741089..6743266 1 NC_005027.1 hypothetical protein 6743266 1790915 RB12518 Rhodopirellula baltica SH 1 hypothetical protein NP_870558.1 6741089 D 243090 CDS NP_870559.1 32477565 1796100 6743233..6744330 1 NC_005027.1 signal peptide 6744330 1796100 RB12519 Rhodopirellula baltica SH 1 signal peptide NP_870559.1 6743233 D 243090 CDS NP_870560.1 32477566 1795697 6744279..6746459 1 NC_005027.1 best DB hits: PFAM: PF02163; Sterol-regulatory element bindi; E=0.78 PF00364; Biotin-requiring enzyme; E=0.21 PF00358; phosphoenolpyruvate-dependent s; E=0.42; hypothetical protein 6746459 1795697 RB12521 Rhodopirellula baltica SH 1 hypothetical protein NP_870560.1 6744279 D 243090 CDS NP_870561.1 32477567 1792859 6746493..6747125 1 NC_005027.1 best DB hits: BLAST: gb:AAG51290.1; AC027035_13 (AC027035) unknown protein [Arabidopsis; E=3e-08 gb:AAG51209.1; AC051630_6 (AC051630) peptide chain release factor,; E=1e-07 gb:AAF53262.1; (AE003639) CG5705 gene product [Drosophila; E=0.20; peptide chain release factor 6747125 1792859 RB12524 Rhodopirellula baltica SH 1 peptide chain release factor NP_870561.1 6746493 D 243090 CDS NP_870562.1 32477568 1792938 6747132..6747902 1 NC_005027.1 PMID: 10382966 best DB hits: BLAST: pir:G70414; conserved hypothetical protein aq_1327 - Aquifex; E=1e-30 pir:G72297; conserved hypothetical protein - Thermotoga maritima; E=1e-28 pir:T34718; probable integral membrane protein - Streptomyces; E=2e-26 COG: aq_1327; COG0705 Uncharacterized membrane protein (homolog of; E=1e-31 PFAM: PF01694; Rhomboid family; E=3e-30; hypothetical protein 6747902 1792938 RB12526 Rhodopirellula baltica SH 1 hypothetical protein NP_870562.1 6747132 D 243090 CDS NP_870563.1 32477569 1796828 6747917..6748945 1 NC_005027.1 hypothetical protein 6748945 1796828 RB12528 Rhodopirellula baltica SH 1 hypothetical protein NP_870563.1 6747917 D 243090 CDS NP_870564.1 32477570 1793242 6749031..6750248 1 NC_005027.1 PMID: 9634230 best DB hits: BLAST: swissprot:Q50644; YP77_MYCTU HYPOTHETICAL 57.3 KDA PROTEIN RV2577; E=9e-08 gb:AAF47971.1; (AE003484) CG1637 gene product [alt 1] [Drosophila; E=9e-06 gb:AAF47969.1; (AE003484) CG1637 gene product [alt 3] [Drosophila; E=6e-04 PFAM: PF02908; Purple acid phosphatase, N-ter; E=0.013 PF02227; Purple acid phosphatase; E=8.7e-08; phosphatase 6750248 1793242 RB12532 Rhodopirellula baltica SH 1 phosphatase NP_870564.1 6749031 D 243090 CDS NP_870565.1 32477571 1790179 6750299..6751594 1 NC_005027.1 signal peptide 6751594 1790179 RB12533 Rhodopirellula baltica SH 1 signal peptide NP_870565.1 6750299 D 243090 CDS NP_870566.1 32477572 1791866 6751597..6754128 1 NC_005027.1 signal peptide 6754128 1791866 RB12534 Rhodopirellula baltica SH 1 signal peptide NP_870566.1 6751597 D 243090 CDS NP_870567.1 32477573 1795338 6754144..6754302 1 NC_005027.1 hypothetical protein 6754302 1795338 RB12537 Rhodopirellula baltica SH 1 hypothetical protein NP_870567.1 6754144 D 243090 CDS NP_870568.1 32477574 1791394 6754353..6756758 1 NC_005027.1 signal peptide 6756758 1791394 RB12538 Rhodopirellula baltica SH 1 signal peptide NP_870568.1 6754353 D 243090 CDS NP_870569.1 32477575 1792670 6756939..6758414 1 NC_005027.1 best DB hits: BLAST: swissprot:Q10801; DIPZ_MYCTU DIPZ PROTEIN ----- pir: E70923; E=3e-04 pir:E69891; cytochrome c biogenesis protein CycX homolog homolog; E=3e-04 pir:F75549; cytochrome c biogenesis protein CycX homolog DR0189; E=8e-04 COG: BS_yneN; COG0526 Thiol-disulfide isomerase and thioredoxins; E=3e-05 PFAM: PF00085; Thioredoxin; E=0.13; thioredoxin 6758414 1792670 RB12541 Rhodopirellula baltica SH 1 thioredoxin NP_870569.1 6756939 D 243090 CDS NP_870570.1 32477576 1793271 complement(6758519..6759514) 1 NC_005027.1 hypothetical protein 6759514 1793271 RB12543 Rhodopirellula baltica SH 1 hypothetical protein NP_870570.1 6758519 R 243090 CDS NP_870571.1 32477577 1794299 complement(6759511..6761082) 1 NC_005027.1 best DB hits: BLAST: gb:AAB69633.1; (U82513) random slug cDNA25 protein [Dictyostelium; E=0.012; hypothetical protein 6761082 1794299 RB12544 Rhodopirellula baltica SH 1 hypothetical protein NP_870571.1 6759511 R 243090 CDS NP_870572.1 32477578 1794809 complement(6761150..6762505) 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB05490.1; (AP001513) BH1771~unknown conserved protein; E=3e-96 swissprot:P50840; YPSC_BACSU HYPOTHETICAL 43.5 KD PROTEIN IN; E=8e-88 gb:AAK05749.1; AE006395_9 (AE006395) HYPOTHETICAL PROTEIN; E=8e-72 COG: BH1771; COG0116 Predicted N6-adenine-specific DNA methylases; E=3e-97 PFAM: PF01170; Uncharacterized protein family UP; E=5.4e-113; N-6 adenine-specific DNA methylase 6762505 1794809 RB12549 Rhodopirellula baltica SH 1 N-6 adenine-specific DNA methylase NP_870572.1 6761150 R 243090 CDS NP_870573.1 32477579 1795431 complement(6762534..6762725) 1 NC_005027.1 hypothetical protein 6762725 1795431 RB12550 Rhodopirellula baltica SH 1 hypothetical protein NP_870573.1 6762534 R 243090 CDS NP_870574.1 32477580 1795336 6762717..6763907 1 NC_005027.1 PMID: 7929259 best DB hits: BLAST: ddbj:BAA03434.1; (D14581) fatty-acid desaturase [Anabaena; E=3e-44 gb:AAB61353.1; (U36390) delta-9 desaturase [Synechococcus sp. PCC; E=2e-42 gb:AAD00699.1; (U90417) delta 9 acyl-lipid fatty acid desaturase; E=4e-42 COG: sll0541; COG1398 Fatty-acid desaturase; E=7e-43 PFAM: PF01069; Fatty acid desaturase; E=1e-19; fatty-acid desaturase 6763907 scd 1795336 scd Rhodopirellula baltica SH 1 fatty-acid desaturase NP_870574.1 6762717 D 243090 CDS NP_870575.1 32477581 1794099 6764163..6764378 1 NC_005027.1 hypothetical protein 6764378 1794099 RB12554 Rhodopirellula baltica SH 1 hypothetical protein NP_870575.1 6764163 D 243090 CDS NP_870576.1 32477582 1790775 complement(6764463..6765644) 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB56131.1; (AL117669) hypothetical protein [Streptomyces; E=1e-22 pir:T35709; hypothetical protein SC7H1.14 SC7H1.14 - Streptomyces; E=6e-16 pir:S13421; polymeric globin alpha - brine shrimp (fragment) -----; E=0.087; hypothetical protein 6765644 1790775 RB12556 Rhodopirellula baltica SH 1 hypothetical protein NP_870576.1 6764463 R 243090 CDS NP_870577.1 32477583 1795693 complement(6765659..6765784) 1 NC_005027.1 hypothetical protein 6765784 1795693 RB12557 Rhodopirellula baltica SH 1 hypothetical protein NP_870577.1 6765659 R 243090 CDS NP_870578.1 32477584 1795384 6765837..6766604 1 NC_005027.1 hypothetical protein 6766604 1795384 RB12558 Rhodopirellula baltica SH 1 hypothetical protein NP_870578.1 6765837 D 243090 CDS NP_870579.1 32477585 1796095 complement(6766660..6767877) 1 NC_005027.1 PMID: 2668691 PMID: 2190615 best DB hits: BLAST: pir:C70845; probable nagA protein - Mycobacterium tuberculosis; E=2e-33 gb:AAK05433.1; AE006366_2 (AE006366); E=1e-32 gb:AAG58267.1; AE005542_9 (AE005542) ; E=2e-32 COG: Rv3332; COG1820 N-acetylglucosamine-6-phosphate deacetylase; E=2e-34 Ta1060; COG0402 Cytosine deaminase and related metal-dependent; E=0.001 yicP; COG1001 Adenine deaminase; E=0.002 PFAM: PF01979; Adenine deaminase; E=0.071 PF01685; Chlorohydrolase; E=0.002 PF01979; Adenine deaminase; E=8.9e-07; N-acetylglucosamine-6-phosphate deacetylase 6767877 nagA 1796095 nagA Rhodopirellula baltica SH 1 N-acetylglucosamine-6-phosphate deacetylase NP_870579.1 6766660 R 243090 CDS NP_870580.1 32477586 1792468 6767970..6769232 1 NC_005027.1 PMID: 2001402 best DB hits: BLAST: swissprot:P28036; DHET_ACEPO ALCOHOL DEHYDROGENASE [ACCEPTOR]; E=0.003 gb:AAB89850.1; (AE001008) conserved hypothetical protein; E=0.003 swissprot:Q44002; DHET_ACEEU ALCOHOL DEHYDROGENASE [ACCEPTOR]; E=0.004 COG: AF1399; COG1520 Uncharacterized proteins of WD40-like repeat family; E=3e-04 PFAM: PF01011; PQQ enzyme repeat; E=5.5e-05; alcohol dehydrogenase 6769232 adh 1792468 adh Rhodopirellula baltica SH 1 alcohol dehydrogenase NP_870580.1 6767970 D 243090 CDS NP_870581.1 32477587 1794285 6769320..6770612 1 NC_005027.1 best DB hits: BLAST: gb:AAC23913.1; (AF039207) NADH-dependent dehydrogenase homolog; E=1e-09 swissprot:O05389; YRBE_BACSU HYPOTHETICAL 37.8 KDA PROTEIN IN; E=6e-09 pir:D72381; dehydrogenase - Thermotoga maritima (strain MSB8); E=3e-07 COG: BS_yrbE; COG0673 Predicted dehydrogenases and related proteins; E=5e-10 PFAM: PF01408; Oxidoreductase, NAD-bindi; E=3.4e-16; NADH-dependent dehydrogenase-like protein 6770612 1794285 RB12564 Rhodopirellula baltica SH 1 NADH-dependent dehydrogenase-like protein NP_870581.1 6769320 D 243090 CDS NP_870582.1 32477588 1792233 complement(6770624..6772111) 1 NC_005027.1 best DB hits: PFAM: PF00884; Sulfatase; E=0.63; sulfatase 6772111 1792233 RB12566 Rhodopirellula baltica SH 1 sulfatase NP_870582.1 6770624 R 243090 CDS NP_870583.1 32477589 1791599 complement(6772108..6774933) 1 NC_005027.1 best DB hits: PFAM: PF02704; Gibberellin regulated protein; E=0.082 PF00034; Cytochrome c; E=0.79; hypothetical protein 6774933 1791599 RB12567 Rhodopirellula baltica SH 1 hypothetical protein NP_870583.1 6772108 R 243090 CDS NP_870584.1 32477590 1791320 6774854..6775450 1 NC_005027.1 hypothetical protein 6775450 1791320 RB12570 Rhodopirellula baltica SH 1 hypothetical protein NP_870584.1 6774854 D 243090 CDS NP_870585.1 32477591 1796831 complement(6775435..6776475) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:E75266; GGDEF family protein - Deinococcus radiodurans (strain; E=2e-27 gb:AAA87378.1; (L42554) pleD gene product [Caulobacter; E=2e-25 gb:AAD28578.1; AF121341_2 (AF121341) response regulator; E=3e-25 COG: DR2498; COG2199 Diguanylate cyclase/phosphodiesterase domain 1; E=2e-28 TM1594; COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF); E=7e-21 yddV_2; COG2199 Diguanylate cyclase/phosphodiesterase domain 1; E=9e-21 PFAM: PF00897; Orbivirus inner capsid protein VP7; E=0.89 PF00498; FHA domain; E=1.3e-19 PF00990; GGDEF domain; E=3.2e-60; GGDEF family protein 6776475 1796831 RB12571 Rhodopirellula baltica SH 1 GGDEF family protein NP_870585.1 6775435 R 243090 CDS NP_870586.1 32477592 1793807 complement(6776472..6778910) 1 NC_005027.1 PMID: 7768349 best DB hits: BLAST: pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=1e-32 gb:AAF73695.1; (AE002226) serinethreonine-protein kinase; E=3e-32 embl:CAA10713.1; (AJ132604) hypothetical protein [Lactococcus; E=1e-31 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=1e-33 PFAM: PF00069; Protein kinase domain; E=2.1e-33 PF00515; TPR Domain; E=0.017; serine/threonine-protein kinase 6778910 1793807 RB12572 Rhodopirellula baltica SH 1 serine/threonine-protein kinase NP_870586.1 6776472 R 243090 CDS NP_870587.1 32477593 1794799 6778873..6779115 1 NC_005027.1 hypothetical protein 6779115 1794799 RB12576 Rhodopirellula baltica SH 1 hypothetical protein NP_870587.1 6778873 D 243090 CDS NP_870588.1 32477594 1794970 6779119..6779886 1 NC_005027.1 translation elongation factor EF-P 6779886 efp 1794970 efp Rhodopirellula baltica SH 1 translation elongation factor EF-P NP_870588.1 6779119 D 243090 CDS NP_870589.1 32477595 1793086 complement(6779930..6780121) 1 NC_005027.1 hypothetical protein 6780121 1793086 RB12580 Rhodopirellula baltica SH 1 hypothetical protein NP_870589.1 6779930 R 243090 CDS NP_870590.1 32477596 1790793 complement(6780073..6780597) 1 NC_005027.1 hypothetical protein 6780597 1790793 RB12581 Rhodopirellula baltica SH 1 hypothetical protein NP_870590.1 6780073 R 243090 CDS NP_870591.1 32477597 1792791 6780591..6780791 1 NC_005027.1 signal peptide 6780791 1792791 RB12583 Rhodopirellula baltica SH 1 signal peptide NP_870591.1 6780591 D 243090 CDS NP_870592.1 32477598 1794200 6780825..6781466 1 NC_005027.1 hypothetical protein 6781466 1794200 RB12586 Rhodopirellula baltica SH 1 hypothetical protein NP_870592.1 6780825 D 243090 CDS NP_870593.1 32477599 1791080 complement(6781485..6782735) 1 NC_005027.1 signal peptide 6782735 1791080 RB12588 Rhodopirellula baltica SH 1 signal peptide NP_870593.1 6781485 R 243090 CDS NP_870594.1 32477600 1790418 complement(6782844..6784265) 1 NC_005027.1 PMID: 11157937 best DB hits: BLAST: swissprot:Q46638; AMSK_ERWAM AMYLOVORAN BIOSYNTHESIS PROTEIN AMSK; E=9e-14 ddbj:BAB07095.1; (AP001518) lipopolysaccharide biosynthesis; E=1e-13 pir:A82265; probable polysaccharide biosynthesis protein VC0925; E=3e-13 COG: BH3376; COG0438 Predicted glycosyltransferases; E=1e-14 PFAM: PF00534; Glycosyl transferases group 1; E=1.3e-32; hexosyltransferase 6784265 1790418 RB12590 Rhodopirellula baltica SH 1 hexosyltransferase NP_870594.1 6782844 R 243090 CDS NP_870595.1 32477601 1792728 complement(6784272..6784457) 1 NC_005027.1 hypothetical protein 6784457 1792728 RB12596 Rhodopirellula baltica SH 1 hypothetical protein NP_870595.1 6784272 R 243090 CDS NP_870596.1 32477602 1794330 6784428..6785555 1 NC_005027.1 PMID: 3547331 best DB hits: BLAST: ddbj:BAB06776.1; (AP001517) 3-isopropylmalate dehydrogenase; E=1e-102 swissprot:P05645; LEU3_BACSU 3-ISOPROPYLMALATE DEHYDROGENASE; E=1e-101 pir:A26522; 3-isopropylmalate dehydrogenase (EC 1.1.1.85) - Bacillus; E=1e-100 COG: BH3057; COG0473 Isocitrate/isopropylmalate dehydrogenase; E=1e-103 PFAM: PF00180; Isocitrate and isopropylmalate dehyd; E=5.4e-201; 3-isopropylmalate dehydrogenase 6785555 leuB 1794330 leuB Rhodopirellula baltica SH 1 3-isopropylmalate dehydrogenase NP_870596.1 6784428 D 243090 CDS NP_870597.1 32477603 1795847 6785640..6786605 1 NC_005027.1 PMID: 2995358 PMID: 2995359 best DB hits: BLAST: gb:AAK04086.1; (AE006236) unknown [Pasteurella multocida]; E=7e-53 pir:A83329; probable phosphatidate cytidylyltransferase PA2536; E=2e-51 pir:H82138; probable phosphatidate cytidylyltransferase VC1936; E=2e-32 COG: PA2536; COG0575 CDP-diglyceride synthetase; E=2e-52 PFAM: PF01148; Phosphatidate cytidylyltransf; E=5.5e-08; phosphatidate cytidylyltransferase 6786605 cdsA 1795847 cdsA Rhodopirellula baltica SH 1 phosphatidate cytidylyltransferase NP_870597.1 6785640 D 243090 CDS NP_870598.1 32477604 1796854 6786668..6787201 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:A75455; hypothetical protein - Deinococcus radiodurans (strain; E=2e-16 ddbj:BAB13746.1; (AB032601) azoreductase [Bacillus sp. OY1-2]; E=2e-05 gb:AAD13563.1; (AF080235) reductase homolog [Streptomyces; E=5e-04 COG: BH2050; COG0431 Predicted flavoprotein; E=6e-05; flavoprotein 6787201 1796854 RB12599 Rhodopirellula baltica SH 1 flavoprotein NP_870598.1 6786668 D 243090 CDS NP_870599.1 32477605 1794442 complement(6787357..6788190) 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S74482; UDP-N-acetyl-D-mannosaminuronic acid transferase rffM-1; E=6e-44 pir:C82265; UDP-N-acetyl-D-mannosamine transferase VC0927 [imported]; E=2e-20 gb:AAC78668.1; (AF094575) N-acetyl-mannosamine; E=1e-15 COG: slr1118; COG1922 Teichoic acid biosynthesis proteins; E=5e-45; UDP-N-acetyl-D-mannosaminuronic acid transferase 6788190 wecG 1794442 wecG Rhodopirellula baltica SH 1 UDP-N-acetyl-D-mannosaminuronic acid transferase NP_870599.1 6787357 R 243090 CDS NP_870600.1 32477606 1796873 complement(6788187..6789167) 1 NC_005027.1 best DB hits: BLAST: pir:T35588; probable secreted protein - Streptomyces coelicolor; E=0.24 ddbj:BAB05636.1; (AP001513) chitooligosaccharide deacetylase; E=0.63 PFAM: PF01522; Polysaccharide deacetylase; E=0.00027; chitooligosaccharide deacetylase 6789167 1796873 RB12602 Rhodopirellula baltica SH 1 chitooligosaccharide deacetylase NP_870600.1 6788187 R 243090 CDS NP_870601.1 32477607 1792560 complement(6789164..6790570) 1 NC_005027.1 best DB hits: BLAST: gb:AAF14309.1; (U45308) SqdX [Synechococcus sp. PCC 7942]; E=0.009 pir:T34839; probable hexosyltransferase (EC 2.4.1.-) SC2G5.06; E=0.031 pir:T35514; probable glycosyl transferase - Streptomyces coelicolor; E=0.072; hexosyltransferase 6790570 1792560 RB12604 Rhodopirellula baltica SH 1 hexosyltransferase NP_870601.1 6789164 R 243090 CDS NP_870602.1 32477608 1795381 complement(6790580..6791866) 1 NC_005027.1 PMID: 99184998 best DB hits: BLAST: gb:AAD24451.1; AF118389_8 (AF118389) Cps2E [Streptococcus suis]; E=4e-34 pir:S75572; glucosyltransferase - Synechocystis sp. (strain PCC; E=1e-33 pir:JC5726; phosphate-prenyl glycosyl-1-phosphate transferase (EC; E=9e-33 COG: slr0820; COG2148 Sugar transferases involved in lipopolysaccharide; E=9e-35 PFAM: PF02397; Bacterial sugar transferase; E=3.6e-52; Cps2E 6791866 1795381 RB12606 Rhodopirellula baltica SH 1 Cps2E NP_870602.1 6790580 R 243090 CDS NP_870603.1 32477609 1792890 complement(6791928..6793742) 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:D83367; hypothetical protein PA2235 [imported] - Pseudomonas; E=0.002 swissprot:P33698; EXOP_RHIME SUCCINOGLYCAN BIOSYNTHESIS TRANSPORT; E=0.010 pir:S37031; probable succinoglycan transport protein exoP -; E=0.021 COG: PA2235; COG3206 Uncharacterized protein involved in; E=2e-04; hypothetical protein 6793742 1792890 RB12608 Rhodopirellula baltica SH 1 hypothetical protein NP_870603.1 6791928 R 243090 CDS NP_870604.1 32477610 1792733 6793700..6793957 1 NC_005027.1 hypothetical protein 6793957 1792733 RB12610 Rhodopirellula baltica SH 1 hypothetical protein NP_870604.1 6793700 D 243090 CDS NP_870605.1 32477611 1796111 6793964..6794791 1 NC_005027.1 best DB hits: BLAST: pir:S75267; hypothetical protein slr1039 - Synechocystis sp. (strain; E=5e-07 swissprot:P46326; YXBB_BACSU HYPOTHETICAL 28.2 KDA PROTEIN IN; E=7e-06 gb:AAG29793.1; AF235050_16 (AF235050) methyltransferase; E=0.005 COG: slr1039; COG0500 SAM-dependent methyltransferases; E=5e-08 VC1257; COG2227; E=9e-04 BH2331; COG0500 SAM-dependent methyltransferases; E=0.001; methyltransferase 6794791 1796111 RB12611 Rhodopirellula baltica SH 1 methyltransferase NP_870605.1 6793964 D 243090 CDS NP_870606.1 32477612 1790350 6794730..6794969 1 NC_005027.1 hypothetical protein 6794969 1790350 RB12612 Rhodopirellula baltica SH 1 hypothetical protein NP_870606.1 6794730 D 243090 CDS NP_870607.1 32477613 1793491 6794945..6795739 1 NC_005027.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 6795739 thyA 1793491 thyA Rhodopirellula baltica SH 1 thymidylate synthase NP_870607.1 6794945 D 243090 CDS NP_870608.1 32477614 1790628 6795837..6796424 1 NC_005027.1 PMID: 320005 best DB hits: BLAST: gb:AAD56934.1; AF180145_26 (AF180145) dihydrofolate reductase; E=1e-23 swissprot:P12833; DYR3_SALTY DIHYDROFOLATE REDUCTASE TYPE III; E=5e-22 pir:G82322; dihydrofolate reductase VC0440 [imported] - Vibrio; E=1e-20 COG: VC0440; COG0262 Dihydrofolate reductase; E=1e-21 PFAM: PF00186; Dihydrofolate reductase; E=2.9e-40; dihydrofolate reductase 6796424 folA 1790628 folA Rhodopirellula baltica SH 1 dihydrofolate reductase NP_870608.1 6795837 D 243090 CDS NP_870609.1 32477615 1791325 complement(6796604..6796861) 1 NC_005027.1 hypothetical protein 6796861 1791325 RB12621 Rhodopirellula baltica SH 1 hypothetical protein NP_870609.1 6796604 R 243090 CDS NP_870610.1 32477616 1791316 6796904..6797287 1 NC_005027.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 6797287 rpsM 1791316 rpsM Rhodopirellula baltica SH 1 30S ribosomal protein S13 NP_870610.1 6796904 D 243090 CDS NP_870611.1 32477617 1792692 6797354..6797737 1 NC_005027.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 6797737 rpsK 1792692 rpsK Rhodopirellula baltica SH 1 30S ribosomal protein S11 NP_870611.1 6797354 D 243090 CDS NP_870612.1 32477618 1793080 6797797..6798792 1 NC_005027.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 6798792 rpoA 1793080 rpoA Rhodopirellula baltica SH 1 DNA-directed RNA polymerase subunit alpha NP_870612.1 6797797 D 243090 CDS NP_870613.1 32477619 1793823 6798878..6799510 1 NC_005027.1 PMID: 2989779 PMID: 10094780 best DB hits: BLAST: swissprot:Q9Z9H5; RL17_THETH 50S RIBOSOMAL PROTEIN L17 -----; E=7e-11 pir:B75313; ribosomal protein L17 - Deinococcus radiodurans (strain; E=3e-09 swissprot:Q9ZCT0; RL17_RICPR 50S RIBOSOMAL PROTEIN L17 -----; E=3e-09 COG: DR2129; COG0203 Ribosomal protein L17; E=2e-10 PFAM: PF01196; Ribosomal protein L17; E=4.2e-06; 50S ribosomal protein L17 6799510 rplQ 1793823 rplQ Rhodopirellula baltica SH 1 50S ribosomal protein L17 NP_870613.1 6798878 D 243090 CDS NP_870614.1 32477620 1792523 complement(6799598..6799726) 1 NC_005027.1 hypothetical protein 6799726 1792523 RB12629 Rhodopirellula baltica SH 1 hypothetical protein NP_870614.1 6799598 R 243090 CDS NP_870615.1 32477621 1793320 6799678..6800712 1 NC_005027.1 signal peptide 6800712 1793320 RB12630 Rhodopirellula baltica SH 1 signal peptide NP_870615.1 6799678 D 243090 CDS NP_870616.1 32477622 1791194 6800639..6802222 1 NC_005027.1 best DB hits: PFAM: PF00327; Ribosomal protein L30p/L7e; E=0.19; signal peptide 6802222 1791194 RB12631 Rhodopirellula baltica SH 1 signal peptide NP_870616.1 6800639 D 243090 CDS NP_870617.1 32477623 1791351 6802219..6803169 1 NC_005027.1 PMID: 10751411 best DB hits: BLAST: gb:AAD48846.1; AF168362_1 (AF168362) protein associating with; E=3e-05 gb:AAF56739.2; (AE003762) CG12879 gene product [Drosophila; E=4e-05 pir:T15138; hypothetical protein T28F2.4 - Caenorhabditis elegans; E=5e-04 COG: NMB1786; COG2850 Uncharacterized ACR; E=0.007 PFAM: PF02373; jmjC domain; E=0.018; protein associating with small stress protein PASS1 6803169 1791351 RB12633 Rhodopirellula baltica SH 1 protein associating with small stress protein PASS1 NP_870617.1 6802219 D 243090 CDS NP_870618.1 32477624 1793298 complement(6803224..6803694) 1 NC_005027.1 signal peptide 6803694 1793298 RB12634 Rhodopirellula baltica SH 1 signal peptide NP_870618.1 6803224 R 243090 CDS NP_870619.1 32477625 1793334 complement(6803801..6805087) 1 NC_005027.1 PMID: 7592499 best DB hits: BLAST: pir:A57710; acetyl-CoA carboxylase (EC 6.4.1.2) - wheat -----; E=2e-05 prf:2208491A; Ac-CoA carboxylase [Triticum aestivum]; E=2e-05 pir:T09538; acetyl-CoA carboxylase (EC 6.4.1.2) - alfalfa -----; E=3e-05 COG: PA0494; COG0439 Biotin carboxylase; E=2e-04 carB; COG0458 Carbamoylphosphate synthase large subunit (split gene; E=0.001 DR0668; COG0458 Carbamoylphosphate synthase large subunit (split; E=0.002 PFAM: PF02786; Carbamoyl-phosphate synthase L ch; E=0.49; acetyl-CoA carboxylase 6805087 acc 1793334 acc Rhodopirellula baltica SH 1 acetyl-CoA carboxylase NP_870619.1 6803801 R 243090 CDS NP_870620.1 32477626 1795880 complement(6805084..6806130) 1 NC_005027.1 PMID: 9488683 best DB hits: BLAST: swissprot:O50098; APBA_PYRHO PROBABLE 2-DEHYDROPANTOATE; E=5e-09 embl:CAB04765.1; (Z82004) ORF12(1) [Rhodococcus erythropolis]; E=2e-08 pir:T35004; probable oxidoreductase - Streptomyces coelicolor; E=5e-06 COG: PH1390; COG1893 Ketopantoate reductase; E=5e-10 PFAM: PF02558; Ketopantoate reductase PanE/ApbA; E=0.00046; 2-dehydropantoate 2-reductase 6806130 apbA 1795880 apbA Rhodopirellula baltica SH 1 2-dehydropantoate 2-reductase NP_870620.1 6805084 R 243090 CDS NP_870621.1 32477627 1791324 complement(6806127..6806249) 1 NC_005027.1 hypothetical protein 6806249 1791324 RB12639 Rhodopirellula baltica SH 1 hypothetical protein NP_870621.1 6806127 R 243090 CDS NP_870622.1 32477628 1792659 complement(6806299..6807978) 1 NC_005027.1 PMID: 11538549 best DB hits: BLAST: gb:AAD32141.1; AF123503_1 (AF123503) Nt-gh3 deduced protein; E=6e-16 pir:T00515; hypothetical protein T20D16.20 - Arabidopsis thaliana; E=1e-15 ddbj:BAA97524.1; (AB026634) auxin-responsive-like protein; E=1e-14; auxin-responsive-like protein 6807978 1792659 RB12640 Rhodopirellula baltica SH 1 auxin-responsive-like protein NP_870622.1 6806299 R 243090 CDS NP_870623.1 32477629 1794409 6807977..6808588 1 NC_005027.1 hypothetical protein 6808588 1794409 RB12643 Rhodopirellula baltica SH 1 hypothetical protein NP_870623.1 6807977 D 243090 CDS NP_870624.1 32477630 1790379 complement(6808336..6808707) 1 NC_005027.1 hypothetical protein 6808707 1790379 RB12645 Rhodopirellula baltica SH 1 hypothetical protein NP_870624.1 6808336 R 243090 CDS NP_870625.1 32477631 1790881 complement(6808846..6810339) 1 NC_005027.1 PMID: 8282725 best DB hits: BLAST: embl:CAB54579.1; (AJ006397) histidine kinase [Streptococcus; E=2e-10 gb:AAG59311.1; AE005644_5 (AE005644) sensor protein for basR; E=6e-10 pir:E83212; probable sensorresponse regulator hybrid PA3462; E=3e-09 COG: PA3462; COG0642 Sensory transduction histidine kinases; E=3e-10 PFAM: PF00512; His Kinase A (phosphoacceptor); E=2.1e-10 PF02518; Histidine kinase-, DNA gyrase B; E=6.2e-15; histidine kinase 6810339 1790881 RB12646 Rhodopirellula baltica SH 1 histidine kinase NP_870625.1 6808846 R 243090 CDS NP_870626.1 32477632 1790849 6810287..6810496 1 NC_005027.1 hypothetical protein 6810496 1790849 RB12648 Rhodopirellula baltica SH 1 hypothetical protein NP_870626.1 6810287 D 243090 CDS NP_870627.1 32477633 1793011 complement(6810538..6810876) 1 NC_005027.1 hypothetical protein 6810876 1793011 RB12649 Rhodopirellula baltica SH 1 hypothetical protein NP_870627.1 6810538 R 243090 CDS NP_870628.1 32477634 1792792 6810910..6812694 1 NC_005027.1 PMID: 7476196 best DB hits: BLAST: embl:CAB87226.1; (AL163641) glucosamine-fructose-6-phosphate; E=1e-135 pir:T44486; glutamine--fructose-6-phosphate transaminase; E=1e-133 gb:AAF09884.1; AE001891_3 (AE001891); E=1e-132 COG: DR0302; COG0449 Glucosamine 6-phosphate synthetase, contains; E=1e-133 PFAM: PF00310; Glutamine amidotransferases class-II; E=2.1e-65 PF01380; SIS domain; E=2.2e-39; glucosamine-fructose-6-phosphate aminotransferase 6812694 glmS 1792792 glmS Rhodopirellula baltica SH 1 glucosamine-fructose-6-phosphate aminotransferase NP_870628.1 6810910 D 243090 CDS NP_870629.1 32477635 1792538 6812798..6813016 1 NC_005027.1 hypothetical protein 6813016 1792538 RB12653 Rhodopirellula baltica SH 1 hypothetical protein NP_870629.1 6812798 D 243090 CDS NP_870630.1 32477636 1791848 6813143..6814678 1 NC_005027.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 6814678 leuA 1791848 leuA Rhodopirellula baltica SH 1 isopropylmalate isomerase large subunit NP_870630.1 6813143 D 243090 CDS NP_870631.1 32477637 1795393 6814851..6815441 1 NC_005027.1 PMID: 2993799 best DB hits: BLAST: ddbj:BAB06774.1; (AP001517) 3-isopropylmalate dehydratase small; E=3e-60 pir:E81128; 3-isopropylmalate dehydratase, small chain NMB1034; E=2e-58 pir:C81836; probable 3-isopropylmalate dehydratase (EC 4.2.1.33); E=5e-58 COG: BH3055; COG0066 3-isopropylmalate dehydratase small subunit; E=3e-61 PFAM: PF00694; Aconitase C-terminal domain; E=5e-62; 3-isopropylmalate dehydratase small subunit 6815441 leuD 1795393 leuD Rhodopirellula baltica SH 1 3-isopropylmalate dehydratase small subunit NP_870631.1 6814851 D 243090 CDS NP_870632.1 32477638 1793208 6815630..6816235 1 NC_005027.1 signal peptide 6816235 1793208 RB12660 Rhodopirellula baltica SH 1 signal peptide NP_870632.1 6815630 D 243090 CDS NP_870633.1 32477639 1790129 6816342..6817250 1 NC_005027.1 PMID: 8787418 best DB hits: BLAST: swissprot:P96076; DCOP_THETH OROTIDINE 5'-PHOSPHATE DECARBOXYLASE; E=3e-38 pir:G75302; orotidine 5'-phosphate decarboxylase - Deinococcus; E=5e-35 gb:AAG19923.1; (AE005076) orotidine-5'-monophosphate (Ura3); PyrF; E=4e-33 COG: DR2200_2; COG0284 Orotidine-5'-phosphate decarboxylase; E=1e-35; orotidine 5-phosphate decarboxylase 6817250 pyrF 1790129 pyrF Rhodopirellula baltica SH 1 orotidine 5-phosphate decarboxylase NP_870633.1 6816342 D 243090 CDS NP_870634.1 32477640 1792175 6817193..6817408 1 NC_005027.1 hypothetical protein 6817408 1792175 RB12662 Rhodopirellula baltica SH 1 hypothetical protein NP_870634.1 6817193 D 243090 CDS NP_870635.1 32477641 1794362 6817409..6817711 1 NC_005027.1 hypothetical protein 6817711 1794362 RB12663 Rhodopirellula baltica SH 1 hypothetical protein NP_870635.1 6817409 D 243090 CDS NP_870636.1 32477642 1790944 6817708..6818412 1 NC_005027.1 hypothetical protein 6818412 1790944 RB12664 Rhodopirellula baltica SH 1 hypothetical protein NP_870636.1 6817708 D 243090 CDS NP_870637.1 32477643 1790307 6818273..6821890 1 NC_005027.1 best DB hits: BLAST: gb:AAB91057.1; (AE001094) molybdopterin oxidoreductase, iron-sulfur; E=5e-29 gb:AAG19285.1; (AE005024) molybdopterin oxidoreductase; HmoA; E=3e-26 gb:AAB90738.1; (AE001069) molybdopterin oxidoreductase, iron-sulfur; E=1e-24 COG: AF0175; COG0437 Fe-S-cluster-containing hydrogenase components 1; E=5e-30 PFAM: PF01568; Molydopterin dinucleotide bin; E=0.018 PF00037; 4Fe-4S binding domain; E=0.15; molybdopterin oxidoreductase, iron-sulfur binding subunit 6821890 1790307 RB12666 Rhodopirellula baltica SH 1 molybdopterin oxidoreductase, iron-sulfur binding subunit NP_870637.1 6818273 D 243090 CDS NP_870638.1 32477644 1790291 complement(6820061..6821848) 1 NC_005027.1 hypothetical protein 6821848 1790291 RB12668 Rhodopirellula baltica SH 1 hypothetical protein NP_870638.1 6820061 R 243090 CDS NP_870639.1 32477645 1793812 6821952..6823373 1 NC_005027.1 best DB hits: BLAST: gb:AAB91058.1; (AE001094) molybdopterin oxidoreductase, membrane; E=5e-06 pir:T50876; hypothetical membrane protein [imported] - Rubrivivax; E=7e-06 gb:AAG19286.1; (AE005024) molybdopterin oxidoreductase; Moz; E=0.019; molybdopterin oxidoreductase, membrane subunit 6823373 1793812 RB12669 Rhodopirellula baltica SH 1 molybdopterin oxidoreductase, membrane subunit NP_870639.1 6821952 D 243090 CDS NP_870640.1 32477646 1794968 6823458..6824990 1 NC_005027.1 hypothetical protein 6824990 1794968 RB12673 Rhodopirellula baltica SH 1 hypothetical protein NP_870640.1 6823458 D 243090 CDS NP_870641.1 32477647 1793838 6825025..6826353 1 NC_005027.1 best DB hits: PFAM: PF01473; cell wall binding repea; E=0.31 PF02326; YMF19 hypothetical plant mitocho; E=0.59; signal peptide 6826353 1793838 RB12676 Rhodopirellula baltica SH 1 signal peptide NP_870641.1 6825025 D 243090 CDS NP_870642.1 32477648 1790066 6826426..6826722 1 NC_005027.1 signal peptide 6826722 1790066 RB12677 Rhodopirellula baltica SH 1 signal peptide NP_870642.1 6826426 D 243090 CDS NP_870643.1 32477649 1792374 6826760..6827779 1 NC_005027.1 best DB hits: BLAST: embl:CAC08530.1; (AJ249578) hypothetical protein [Rhodothermus; E=1e-39 pir:A70488; hypothetical protein aq_2189 - Aquifex aeolicus -----; E=1e-18 ddbj:BAA06975.1; (D32217) ORF3 [Desulfovibrio vulgaris]; E=1e-09 COG: aq_2189; COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in; E=1e-19; hypothetical protein 6827779 1792374 RB12679 Rhodopirellula baltica SH 1 hypothetical protein NP_870643.1 6826760 D 243090 CDS NP_870644.1 32477650 1792739 6827752..6827877 1 NC_005027.1 hypothetical protein 6827877 1792739 RB12680 Rhodopirellula baltica SH 1 hypothetical protein NP_870644.1 6827752 D 243090 CDS NP_870645.1 32477651 1795474 6827847..6829028 1 NC_005027.1 PMID: 7678007 best DB hits: BLAST: embl:CAC08531.1; (AJ249578) cytochrome oxidase subunit II; E=1e-53 swissprot:Q04441; COX2_BACFI CYTOCHROME C OXIDASE POLYPEPTIDE II; E=2e-18 pir:A23711; cytochrome-c oxidase (EC 1.9.3.1) chain IIc precursor -; E=4e-13 COG: slr1136; COG1622 Heme/copper-type cytochrome/quinol oxidases,; E=2e-10 PFAM: PF00116; Cytochrome C oxidase subunit II,; E=5.6e-05 PF00034; Cytochrome c; E=1.5e-05; cytochrome oxidase subunit II 6829028 ctaC 1795474 ctaC Rhodopirellula baltica SH 1 cytochrome oxidase subunit II NP_870645.1 6827847 D 243090 CDS NP_870646.1 32477652 1796798 6829129..6830871 1 NC_005027.1 PMID: 20576172 best DB hits: BLAST: embl:CAC08532.1; (AJ249578) cytochrome oxidase subunit I; E=1e-146 ddbj:BAA06976.1; (D32217) cytochrome c oxidase-like protein; E=1e-122 swissprot:Q06473; COX1_SYNY3 CYTOCHROME C OXIDASE POLYPEPTIDE I; E=3e-99 COG: slr1137; COG0843 Heme/copper-type cytochrome/quinol oxidases,; E=1e-100 RP405; COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit; E=3e-93 BS_ctaD; COG0843 Heme/copper-type cytochrome/quinol oxidases,; E=4e-91 PFAM: PF00115; Cytochrome C and Quinol oxidase pol; E=8.3e-185; cytochrome oxidase subunit I 6830871 ctaD 1796798 ctaD Rhodopirellula baltica SH 1 cytochrome oxidase subunit I NP_870646.1 6829129 D 243090 CDS NP_870647.1 32477653 1792676 complement(6830874..6831038) 1 NC_005027.1 hypothetical protein 6831038 1792676 RB12684 Rhodopirellula baltica SH 1 hypothetical protein NP_870647.1 6830874 R 243090 CDS NP_870648.1 32477654 1790526 6831007..6832302 1 NC_005027.1 PMID: 20576172 best DB hits: BLAST: embl:CAC08533.1; (AJ249578) cytochrome oxidase subunit III; E=3e-27 embl:CAA98149.1; (Z73914) ORF175 protein [Pseudomonas stutzeri]; E=2e-08 gb:AAG34379.1; AF197466_2 (AF197466) NirO [Pseudomonas; E=3e-08 COG: APE0793_2; COG1845 Heme/copper-type cytochrome/quinol oxidase,; E=5e-08 slr2083; COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit; E=8e-08 VNG0662G; COG1845 Heme/copper-type cytochrome/quinol oxidase,; E=2e-06; cytochrome oxidase subunit III 6832302 ctaE 1790526 ctaE Rhodopirellula baltica SH 1 cytochrome oxidase subunit III NP_870648.1 6831007 D 243090 CDS NP_870649.1 32477655 1791385 6832365..6832757 1 NC_005027.1 PMID: 7678007 best DB hits: BLAST: embl:CAC08534.1; (AJ249578) cytochrome oxidase subunit IV; E=0.025; cytochrome oxidase subunit IV 6832757 ctaF 1791385 ctaF Rhodopirellula baltica SH 1 cytochrome oxidase subunit IV NP_870649.1 6832365 D 243090 CDS NP_870650.1 32477656 1792972 6833004..6833324 1 NC_005027.1 signal peptide 6833324 1792972 RB12689 Rhodopirellula baltica SH 1 signal peptide NP_870650.1 6833004 D 243090 CDS NP_870651.1 32477657 1793177 complement(6833336..6834088) 1 NC_005027.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 6834088 kpsU 1793177 kpsU Rhodopirellula baltica SH 1 3-deoxy-manno-octulosonate cytidylyltransferase NP_870651.1 6833336 R 243090 CDS NP_870652.1 32477658 1793252 complement(6834085..6834264) 1 NC_005027.1 hypothetical protein 6834264 1793252 RB12691 Rhodopirellula baltica SH 1 hypothetical protein NP_870652.1 6834085 R 243090 CDS NP_870653.1 32477659 1790766 6834241..6836013 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB05232.1; (AP001512) BH1513~unknown conserved protein in; E=3e-36 pir:S76103; hypothetical protein - Synechocystis sp. (strain PCC; E=8e-35 COG: BH1513; COG2252 Permeases; E=2e-37; permease 6836013 1790766 RB12692 Rhodopirellula baltica SH 1 permease NP_870653.1 6834241 D 243090 CDS NP_870654.1 32477660 1794082 complement(6836007..6836192) 1 NC_005027.1 hypothetical protein 6836192 1794082 RB12693 Rhodopirellula baltica SH 1 hypothetical protein NP_870654.1 6836007 R 243090 CDS NP_870655.1 32477661 1793451 complement(6836147..6837178) 1 NC_005027.1 PMID: 7768349 best DB hits: BLAST: pir:T42076; protein kinase homolog - Streptomyces coelicolor -----; E=2e-12 gb:AAG48248.1; AF282407_1 (AF282407) p70 ribosomal protein S6; E=2e-12 gb:AAF22219.1; AF141378_1 (AF141378) protein kinase PK4 [Zea mays]; E=2e-12 COG: BS_yloP_1; COG0515 Serine/threonine protein kinases; E=2e-12 PFAM: PF01636; Aminoglycoside phosphotransferas; E=0.093 PF00069; Protein kinase domain; E=6.3e-17 PF00285; Citrate synthase; E=0.22; serine/threonine kinase 6837178 1793451 RB12694 Rhodopirellula baltica SH 1 serine/threonine kinase NP_870655.1 6836147 R 243090 CDS NP_870656.1 32477662 1794302 6837183..6837380 1 NC_005027.1 hypothetical protein 6837380 1794302 RB12696 Rhodopirellula baltica SH 1 hypothetical protein NP_870656.1 6837183 D 243090 CDS NP_870657.1 32477663 1789914 6837436..6842547 1 NC_005027.1 best DB hits: BLAST: embl:CAC19834.1; (AJ401093) hypothetical protein [Actinomyces; E=0.065 ddbj:BAB10333.1; (AB016872) gene_id:K21P3.2~unknown protein; E=0.081 pir:T28679; fibrinogen-binding protein homolog - Staphylococcus; E=0.26 PFAM: PF00404; Dockerin type I repeat; E=0.01; adhesin 6842547 1789914 RB12697 Rhodopirellula baltica SH 1 adhesin NP_870657.1 6837436 D 243090 CDS NP_870658.1 32477664 1790022 complement(6842722..6844113) 1 NC_005027.1 signal peptide 6844113 1790022 RB12700 Rhodopirellula baltica SH 1 signal peptide NP_870658.1 6842722 R 243090 CDS NP_870659.1 32477665 1795971 complement(6844083..6844877) 1 NC_005027.1 signal peptide 6844877 1795971 RB12702 Rhodopirellula baltica SH 1 signal peptide NP_870659.1 6844083 R 243090 CDS NP_870660.1 32477666 1794745 complement(6844874..6845134) 1 NC_005027.1 hypothetical protein 6845134 1794745 RB12705 Rhodopirellula baltica SH 1 hypothetical protein NP_870660.1 6844874 R 243090 CDS NP_870661.1 32477667 1792514 complement(6845145..6846587) 1 NC_005027.1 hypothetical protein 6846587 1792514 RB12707 Rhodopirellula baltica SH 1 hypothetical protein NP_870661.1 6845145 R 243090 CDS NP_870662.1 32477668 1792245 6846593..6846703 1 NC_005027.1 hypothetical protein 6846703 1792245 RB12710 Rhodopirellula baltica SH 1 hypothetical protein NP_870662.1 6846593 D 243090 CDS NP_870663.1 32477669 1795337 6846807..6848021 1 NC_005027.1 hypothetical protein 6848021 1795337 RB12711 Rhodopirellula baltica SH 1 hypothetical protein NP_870663.1 6846807 D 243090 CDS NP_870664.1 32477670 1790703 6848021..6849088 1 NC_005027.1 PMID: 11759840 best DB hits: PFAM: PF01040; UbiA prenyltransferase; E=2.4e-11; signal peptide 6849088 1790703 RB12713 Rhodopirellula baltica SH 1 signal peptide NP_870664.1 6848021 D 243090 CDS NP_870665.1 32477671 1791206 complement(6849115..6849459) 1 NC_005027.1 hypothetical protein 6849459 1791206 RB12716 Rhodopirellula baltica SH 1 hypothetical protein NP_870665.1 6849115 R 243090 CDS NP_870666.1 32477672 1793013 6849432..6850577 1 NC_005027.1 PMID: 10910347 best DB hits: BLAST: gb:AAK00328.1; AF320250_1 (AF320250) YmdA [Lactobacillus; E=0.029 pir:F82689; tRNA adenylyltransferase XF1362 [imported] - Xylella; E=0.044 pir:D71218; hypothetical protein PH0007 - Pyrococcus horikoshii; E=0.054 COG: XF1362; COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; E=0.004 PH0007; COG2413 Uncharacterized ACR; E=0.005 PFAM: PF01966; HD domain; E=0.0033; tRNA adenylyltransferase 6850577 1793013 RB12718 Rhodopirellula baltica SH 1 tRNA adenylyltransferase NP_870666.1 6849432 D 243090 CDS NP_870667.1 32477673 1793653 complement(6850620..6856325) 1 NC_005027.1 PMID: 10607664 best DB hits: BLAST: gb:AAB94071.1; (AF022226) mannan-binding lectin; collectin; E=0.004 swissprot:P49259; PA2R_BOVIN 180 KD SECRETORY PHOSPHOLIPASE A2; E=0.10 gb:AAA48719.1; (J04028) proteoglycan core protein [Gallus gallus]; E=0.11 PFAM: PF00059; Lectin C-type domain; E=0.0043; mannan-binding protein MBP (lectin) 6856325 1793653 RB12720 Rhodopirellula baltica SH 1 mannan-binding protein MBP (lectin) NP_870667.1 6850620 R 243090 CDS NP_870668.1 32477674 1792936 complement(6856415..6858241) 1 NC_005027.1 PMID: 1542567 best DB hits: BLAST: pir:H65118; hypothetical adenine-specific methylase in fis- envR; E=4e-29 swissprot:P28638; YHDJ_ECOLI HYPOTHETICAL ADENINE-SPECIFIC; E=4e-29 gb:AAG58390.1; AE005554_1 (AE005554) methyltransferase; E=6e-29 COG: yhdJ; COG0863 Adenine-specific DNA methylase; E=4e-30 jhp1284; COG2189 Adenine specific DNA methylase Mod; E=2e-09 jhp0248; COG0863 Adenine-specific DNA methylase; E=1e-07 PFAM: PF01555; DNA methylase; E=2e-41; adenine-specific methyltransferase 6858241 1792936 RB12724 Rhodopirellula baltica SH 1 adenine-specific methyltransferase NP_870668.1 6856415 R 243090 CDS NP_870669.1 32477675 1792300 complement(6858259..6860301) 1 NC_005027.1 PMID: 9501997 best DB hits: BLAST: ddbj:BAB10033.1; (AB007727) contains similarity to unknown; E=0.18; hypothetical protein 6860301 1792300 RB12727 Rhodopirellula baltica SH 1 hypothetical protein NP_870669.1 6858259 R 243090 CDS NP_870670.1 32477676 1794790 complement(6860259..6860840) 1 NC_005027.1 PMID: 9139909 best DB hits: BLAST: gb:AAC45221.1; (U87307) extracytoplasmic function alternative; E=5e-08 gb:AAC45219.1; (U87308) extracytoplasmic function alternative; E=1e-06 pir:H70507; probable sigE protein - Mycobacterium tuberculosis; E=7e-06 COG: Rv1221; COG1595 DNA-directed RNA polymerase specialized sigma; E=7e-07 Rv3286c; COG1191 DNA-directed RNA polymerase specialized sigma; E=2e-04 slr1545; COG1595 DNA-directed RNA polymerase specialized sigma; E=2e-04 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=6e-06 PF00140; Sigma-70 factor; E=0.019; ECF subfamily RNA polymerase sigma-70 factor 6860840 1794790 RB12730 Rhodopirellula baltica SH 1 ECF subfamily RNA polymerase sigma-70 factor NP_870670.1 6860259 R 243090 CDS NP_870671.1 32477677 1792683 complement(6860800..6862068) 1 NC_005027.1 PMID: 12024217; hypothetical protein 6862068 1792683 RB12732 Rhodopirellula baltica SH 1 hypothetical protein NP_870671.1 6860800 R 243090 CDS NP_870672.1 32477678 1793004 complement(6862186..6863889) 1 NC_005027.1 signal peptide 6863889 1793004 RB12734 Rhodopirellula baltica SH 1 signal peptide NP_870672.1 6862186 R 243090 CDS NP_870673.1 32477679 1795908 6863917..6864114 1 NC_005027.1 hypothetical protein 6864114 1795908 RB12737 Rhodopirellula baltica SH 1 hypothetical protein NP_870673.1 6863917 D 243090 CDS NP_870674.1 32477680 1793492 complement(6864106..6864276) 1 NC_005027.1 hypothetical protein 6864276 1793492 RB12739 Rhodopirellula baltica SH 1 hypothetical protein NP_870674.1 6864106 R 243090 CDS NP_870675.1 32477681 1791740 complement(6864364..6865551) 1 NC_005027.1 PMID: 1482681 best DB hits: BLAST: swissprot:Q01578; GNL_ZYMMO GLUCONOLACTONASE PRECURSOR; E=1e-54 gb:AAK03332.1; (AE006164) unknown [Pasteurella multocida]; E=1e-39 pir:B82698; gluconolactonase precursor XF1297 [imported] - Xylella; E=3e-39 COG: XF1297; COG3386 Uncharacterized protein; E=3e-40; gluconolactonase [precursor] 6865551 gnl 1791740 gnl Rhodopirellula baltica SH 1 gluconolactonase [precursor] NP_870675.1 6864364 R 243090 CDS NP_870676.1 32477682 1794176 complement(6865612..6868329) 1 NC_005027.1 hypothetical protein 6868329 1794176 RB12741 Rhodopirellula baltica SH 1 hypothetical protein NP_870676.1 6865612 R 243090 CDS NP_870677.1 32477683 1794826 complement(6868320..6868430) 1 NC_005027.1 hypothetical protein 6868430 1794826 RB12744 Rhodopirellula baltica SH 1 hypothetical protein NP_870677.1 6868320 R 243090 CDS NP_870678.1 32477684 1792852 6868433..6869674 1 NC_005027.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 6869674 purM 1792852 purM Rhodopirellula baltica SH 1 phosphoribosylaminoimidazole synthetase NP_870678.1 6868433 D 243090 CDS NP_870679.1 32477685 1795345 6869843..6870727 1 NC_005027.1 PMID: 7704272 best DB hits: BLAST: swissprot:O53191; YO64_MYCTU DNA GLYCOSYLASE RV2464C; E=6e-55 embl:CAC10002.1; (AL442143) DNA repair hydrolase; E=6e-46 swissprot:P95744; FPG_SYNEN FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE; E=1e-14 COG: Rv2464c; COG0266 Formamidopyrimidine-DNA glycosylase; E=2e-55 PFAM: PF01149; Formamidopyrimidine-DNA glycos; E=4.3e-40; formamidopyrimidine-DNA glycosylase 6870727 mutM 1795345 mutM Rhodopirellula baltica SH 1 formamidopyrimidine-DNA glycosylase NP_870679.1 6869843 D 243090 CDS NP_870680.1 32477686 1794519 6870758..6870919 1 NC_005027.1 hypothetical protein 6870919 1794519 RB12747 Rhodopirellula baltica SH 1 hypothetical protein NP_870680.1 6870758 D 243090 CDS NP_870681.1 32477687 1791903 complement(6870941..6871765) 1 NC_005027.1 hypothetical protein 6871765 1791903 RB12749 Rhodopirellula baltica SH 1 hypothetical protein NP_870681.1 6870941 R 243090 CDS NP_870682.1 32477688 1796805 6870944..6871483 1 NC_005027.1 hypothetical protein 6871483 1796805 RB12748 Rhodopirellula baltica SH 1 hypothetical protein NP_870682.1 6870944 D 243090 CDS NP_870683.1 32477689 1793331 6871720..6872103 1 NC_005027.1 hypothetical protein 6872103 1793331 RB12751 Rhodopirellula baltica SH 1 hypothetical protein NP_870683.1 6871720 D 243090 CDS NP_870684.1 32477690 1795505 6871994..6873523 1 NC_005027.1 PMID: 2180903 best DB hits: BLAST: pir:F83550; serine proteinase MucD precursor PA0766 [imported] -; E=1e-50 swissprot:Q44597; DEGP_BRUAB PROBABLE SERINE PROTEASE DO-LIKE; E=9e-47 gb:AAK01318.1; (AF190580) MucD [Pseudomonas syringae pv.; E=2e-46 COG: PA0766; COG0265 Trypsin-like serine proteases, typically; E=1e-51 htrA; COG0265 Trypsin-like serine proteases, typically periplasmic,; E=9e-44 aq_1450; COG0265 Trypsin-like serine proteases, typically; E=2e-43 PFAM: PF00089; Trypsin; E=1.8e-14 PF00595; PDZ domain (Also known as DHR or GLG; E=1.4e-10; serine proteinase 6873523 degP 1795505 degP Rhodopirellula baltica SH 1 serine proteinase NP_870684.1 6871994 D 243090 CDS NP_870685.1 32477691 1791400 complement(6873726..6874088) 1 NC_005027.1 hypothetical protein 6874088 1791400 RB12755 Rhodopirellula baltica SH 1 hypothetical protein NP_870685.1 6873726 R 243090 CDS NP_870686.1 32477692 1793294 complement(6873997..6875685) 1 NC_005027.1 PMID: 6171647 best DB hits: BLAST: ddbj:BAB06777.1; (AP001517) 2-isopropylmalate synthase [Bacillus; E=1e-133 pir:A75045; 2-isopropylmalate synthase (leua-1) PAB0890 - Pyrococcus; E=1e-131 pir:F75391; 2-isopropylmalate synthase - Deinococcus radiodurans; E=1e-131 COG: BH3058; COG0119 Isopropylmalate/homocitrate/citramalate synthases; E=1e-134 PFAM: PF00682; HMGL-like; E=1.7e-127; 2-isopropylmalate synthase 6875685 leuA 1793294 leuA Rhodopirellula baltica SH 1 2-isopropylmalate synthase NP_870686.1 6873997 R 243090 CDS NP_870687.1 32477693 1794808 6875827..6875946 1 NC_005027.1 hypothetical protein 6875946 1794808 RB12758 Rhodopirellula baltica SH 1 hypothetical protein NP_870687.1 6875827 D 243090 CDS NP_870688.1 32477694 1794953 complement(6876167..6876916) 1 NC_005027.1 hypothetical protein 6876916 1794953 RB12759 Rhodopirellula baltica SH 1 hypothetical protein NP_870688.1 6876167 R 243090 CDS NP_870689.1 32477695 1794414 6876908..6877060 1 NC_005027.1 hypothetical protein 6877060 1794414 RB12760 Rhodopirellula baltica SH 1 hypothetical protein NP_870689.1 6876908 D 243090 CDS NP_870690.1 32477696 1794366 6877026..6877190 1 NC_005027.1 hypothetical protein 6877190 1794366 RB12761 Rhodopirellula baltica SH 1 hypothetical protein NP_870690.1 6877026 D 243090 CDS NP_870691.1 32477697 1793559 6877208..6880330 1 NC_005027.1 catalyzes the reduction of ribonucleotides to deoxyribonucleotides; the rate-limiting step in dNTP synthesis; vitamin B12-dependent ribonucleotide reductase 6880330 nrdA 1793559 nrdA Rhodopirellula baltica SH 1 vitamin B12-dependent ribonucleotide reductase NP_870691.1 6877208 D 243090 CDS NP_870692.1 32477698 1796884 6880940..6882055 1 NC_005027.1 PMID: 11557134 best DB hits: BLAST: pir:C82181; conserved hypothetical protein VC1592 [imported] -; E=2e-15 pir:G70332; conserved hypothetical protein aq_367 - Aquifex aeolicus; E=6e-15 pir:D83238; hypothetical protein PA3258 [imported] - Pseudomonas; E=2e-13 COG: VC1592; COG2200 Diguanylate cyclase/phosphodiesterase domain 2 (EAL); E=1e-16 aq_367_3; COG2200 Diguanylate cyclase/phosphodiesterase domain 2; E=6e-16 VC1641; COG2200 Diguanylate cyclase/phosphodiesterase domain 2 (EAL); E=2e-09 PFAM: PF00498; FHA domain; E=6.6e-15 PF00563; Domain of unknown function 2; E=3.1e-07; hypothetical protein 6882055 1796884 RB12766 Rhodopirellula baltica SH 1 hypothetical protein NP_870692.1 6880940 D 243090 CDS NP_870693.1 32477699 1796806 6882231..6884336 1 NC_005027.1 PMID: 1971619 PMID: 1944223 best DB hits: BLAST: pir:E72032; general secretion pathway protein E CP1055 [imported] -; E=6e-91 embl:CAA70956.1; (Y09824) etpE [Escherichia coli]; E=2e-93 gb:AAC70102.1; (AF074613) type II secretion protein [Escherichia; E=6e-94 COG: slr0063; COG2804 Predicted ATPases involved in pili biogenesis, PilB; E=1e-81 PFAM: PF00004; ATPase associated with variou; E=0.0009 PF00005; ABC transporter; E=0.074 PF00448; SRP54-type protein, GTPase domain; E=0.01; type IV fimbrial assembly protein PilB 6884336 pilB 1796806 pilB Rhodopirellula baltica SH 1 type IV fimbrial assembly protein PilB NP_870693.1 6882231 D 243090 CDS NP_870694.1 32477700 1793480 complement(6884306..6884806) 1 NC_005027.1 hypothetical protein 6884806 1793480 RB12770 Rhodopirellula baltica SH 1 hypothetical protein NP_870694.1 6884306 R 243090 CDS NP_870695.1 32477701 1791972 6884361..6884558 1 NC_005027.1 hypothetical protein 6884558 1791972 RB12771 Rhodopirellula baltica SH 1 hypothetical protein NP_870695.1 6884361 D 243090 CDS NP_870696.1 32477702 1794654 6884826..6885932 1 NC_005027.1 PMID: 1676385 best DB hits: BLAST: pir:C70365; twitching motility protein PilT - Aquifex aeolicus; E=7e-81 pir:B75333; twitching mobility protein - Deinococcus radiodurans; E=9e-81 embl:CAB56295.1; (AJ249385) twitching motility protein; E=2e-77 COG: aq_745; COG2805 Predicted ATPases involved in pili biogenesis, PilT; E=6e-82 TM0837; COG2804 Predicted ATPases involved in pili biogenesis, PilB; E=4e-27 PFAM: PF00437; Bacterial type II secretion syst; E=0.18 PF02283; Cobinamide kinase / cobinamide p; E=0.86 PF00437; Bacterial type II secretion syst; E=1.5e-51; twitching motility protein PilT 6885932 pilT 1794654 pilT Rhodopirellula baltica SH 1 twitching motility protein PilT NP_870696.1 6884826 D 243090 CDS NP_870697.1 32477703 1795695 6885973..6887763 1 NC_005027.1 PMID: 1971619 best DB hits: BLAST: pir:C75333; general secretion pathway protein E - Deinococcus; E=1e-105 pir:B70469; type IV pilus assembly protein TapB - Aquifex aeolicus; E=1e-104 swissprot:P45792; TAPB_AERHY TYPE IV PILUS ASSEMBLY PROTEIN TAPB; E=1e-100 COG: DR1964; COG2804 Predicted ATPases involved in pili biogenesis, PilB; E=1e-107 PFAM: PF00005; ABC transporter; E=0.27 PF00448; SRP54-type protein, GTPase doma; E=0.01 PF00004; ATPase associated with v; E=0.0029; type IV fimbrial assembly protein PilB 6887763 pilB 1795695 pilB Rhodopirellula baltica SH 1 type IV fimbrial assembly protein PilB NP_870697.1 6885973 D 243090 CDS NP_870698.1 32477704 1790441 6887872..6888231 1 NC_005027.1 crystal structure of protein from Xanthomonas shows pentameric toroidal structure; physiological function is unknown; hypothetical protein 6888231 1790441 RB12778 Rhodopirellula baltica SH 1 hypothetical protein NP_870698.1 6887872 D 243090 CDS NP_870699.1 32477705 1794972 6888383..6889822 1 NC_005027.1 PMID: 1971619 best DB hits: BLAST: pir:A75344; pilin biogenesis protein - Deinococcus radiodurans; E=7e-48 swissprot:P22609; PILC_PSEAE FIMBRIAL ASSEMBLY PROTEIN PILC; E=7e-44 pir:C83078; still frameshift type 4 fimbrial biogenesis protein PilC; E=3e-41 COG: DR1863; COG1459 General secretory pathway protein F; E=6e-49 PFAM: PF00482; Bacterial type II secretion system p; E=1.2e-68; type IV fimbrial assembly protein PilC 6889822 pilC 1794972 pilC Rhodopirellula baltica SH 1 type IV fimbrial assembly protein PilC NP_870699.1 6888383 D 243090 CDS NP_870700.1 32477706 1793179 complement(6889819..6889986) 1 NC_005027.1 hypothetical protein 6889986 1793179 RB12782 Rhodopirellula baltica SH 1 hypothetical protein NP_870700.1 6889819 R 243090 CDS NP_870701.1 32477707 1795909 6889970..6891277 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.62; hypothetical protein 6891277 1795909 RB12783 Rhodopirellula baltica SH 1 hypothetical protein NP_870701.1 6889970 D 243090 CDS NP_870702.1 32477708 1796896 6891325..6892548 1 NC_005027.1 signal peptide 6892548 1796896 RB12785 Rhodopirellula baltica SH 1 signal peptide NP_870702.1 6891325 D 243090 CDS NP_870703.1 32477709 1795891 6892551..6893792 1 NC_005027.1 best DB hits: PFAM: PF02501; Bacterial type II secretion system p; E=0.41 PF00114; Pilin (bacterial filament); E=0.025; hypothetical protein 6893792 1795891 RB12786 Rhodopirellula baltica SH 1 hypothetical protein NP_870703.1 6892551 D 243090 CDS NP_870704.1 32477710 1792827 6893792..6895354 1 NC_005027.1 signal peptide 6895354 1792827 RB12787 Rhodopirellula baltica SH 1 signal peptide NP_870704.1 6893792 D 243090 CDS NP_870705.1 32477711 1792580 6895351..6902541 1 NC_005027.1 best DB hits: PFAM: PF01537; Herpesvirus glycoprotein D; E=0.038; hypothetical protein 6902541 1792580 RB12790 Rhodopirellula baltica SH 1 hypothetical protein NP_870705.1 6895351 D 243090 CDS NP_870706.1 32477712 1791329 6902552..6904978 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.53; signal peptide 6904978 1791329 RB12795 Rhodopirellula baltica SH 1 signal peptide NP_870706.1 6902552 D 243090 CDS NP_870707.1 32477713 1794817 6905009..6905182 1 NC_005027.1 hypothetical protein 6905182 1794817 RB12797 Rhodopirellula baltica SH 1 hypothetical protein NP_870707.1 6905009 D 243090 CDS NP_870708.1 32477714 1795863 complement(6905179..6908262) 1 NC_005027.1 PMID: 6276402 best DB hits: BLAST: gb:AAD28505.1; AF121780_1 (AF121780) DNA polymerase I [Rhodothermus; E=1e-166 swissprot:P43741; DPO1_HAEIN DNA POLYMERASE I (POL I) ----- pir:; E=1e-165 gb:AAC98908.1; (AF028719) DNA polymerase type I [Rhodothermus sp.; E=1e-164 COG: HI0856_2; COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase; E=1e-122 jhp1363_2; COG0749 DNA polymerase I - 3'-5' exonuclease and; E=1e-55 RP776_1; COG0258 5'-3' exonuclease (including N-terminal domain of; E=3e-46 PFAM: PF02739; 5'-3' exonuclease, N-terminal; E=1e-62 PF01367; 5'-3' exonuclease, C-terminal; E=2e-37 PF01612; 3'-5' exonuclease; E=2.5e-47; DNA polymerase I 6908262 polA 1795863 polA Rhodopirellula baltica SH 1 DNA polymerase I NP_870708.1 6905179 R 243090 CDS NP_870709.1 32477715 1795688 6908240..6908710 1 NC_005027.1 hypothetical protein 6908710 1795688 RB12800 Rhodopirellula baltica SH 1 hypothetical protein NP_870709.1 6908240 D 243090 CDS NP_870710.1 32477716 1792941 6908746..6908985 1 NC_005027.1 hypothetical protein 6908985 1792941 RB12802 Rhodopirellula baltica SH 1 hypothetical protein NP_870710.1 6908746 D 243090 CDS NP_870711.1 32477717 1795468 complement(6908939..6909112) 1 NC_005027.1 hypothetical protein 6909112 1795468 RB12803 Rhodopirellula baltica SH 1 hypothetical protein NP_870711.1 6908939 R 243090 CDS NP_870712.1 32477718 1792478 6909137..6910618 1 NC_005027.1 PMID: 9851916 best DB hits: BLAST: gb:AAF60367.1; (AC006607) Hypothetical protein C09E7.a; E=0.015 gb:AAF60369.1; (AC006607) Hypothetical protein C09E7.c; E=0.20 gb:AAF17230.1; AF126020_1 (AF126020) B-cell receptor-associated; E=0.47; hypothetical protein 6910618 1792478 RB12804 Rhodopirellula baltica SH 1 hypothetical protein NP_870712.1 6909137 D 243090 CDS NP_870713.1 32477719 1792572 complement(6910548..6911165) 1 NC_005027.1 hypothetical protein 6911165 1792572 RB12806 Rhodopirellula baltica SH 1 hypothetical protein NP_870713.1 6910548 R 243090 CDS NP_870714.1 32477720 1789918 complement(6911241..6912350) 1 NC_005027.1 signal peptide 6912350 1789918 RB12808 Rhodopirellula baltica SH 1 signal peptide NP_870714.1 6911241 R 243090 CDS NP_870715.1 32477721 1792521 6912339..6912542 1 NC_005027.1 hypothetical protein 6912542 1792521 RB12810 Rhodopirellula baltica SH 1 hypothetical protein NP_870715.1 6912339 D 243090 CDS NP_870716.1 32477722 1794376 complement(6912580..6912792) 1 NC_005027.1 hypothetical protein 6912792 1794376 RB12811 Rhodopirellula baltica SH 1 hypothetical protein NP_870716.1 6912580 R 243090 CDS NP_870717.1 32477723 1795598 complement(6912793..6914016) 1 NC_005027.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 6914016 fabH 1795598 fabH Rhodopirellula baltica SH 1 3-oxoacyl-ACP synthase NP_870717.1 6912793 R 243090 CDS NP_870718.1 32477724 1791175 complement(6913968..6914183) 1 NC_005027.1 hypothetical protein 6914183 1791175 RB12813 Rhodopirellula baltica SH 1 hypothetical protein NP_870718.1 6913968 R 243090 CDS NP_870719.1 32477725 1793762 complement(6914337..6914528) 1 NC_005027.1 hypothetical protein 6914528 1793762 RB12814 Rhodopirellula baltica SH 1 hypothetical protein NP_870719.1 6914337 R 243090 CDS NP_870720.1 32477726 1795699 complement(6914525..6914656) 1 NC_005027.1 hypothetical protein 6914656 1795699 RB12815 Rhodopirellula baltica SH 1 hypothetical protein NP_870720.1 6914525 R 243090 CDS NP_870721.1 32477727 1794789 6914710..6915483 1 NC_005027.1 PMID: 3298209 best DB hits: BLAST: pir:E70885; hypothetical protein Rv2859c - Mycobacterium; E=2e-24 pir:C83609; probable glutamine amidotransferase PA0297 [imported] -; E=1e-19 pir:T36850; hypothetical protein SCI35.37 - Streptomyces coelicolor; E=1e-17 COG: Rv2859c; COG2071 Predicted glutamine amidotransferases; E=2e-25 PFAM: PF00117; Glutamine amidotransferase class-I; E=8.7e-05; glutamine amidotransferase 6915483 guaA 1794789 guaA Rhodopirellula baltica SH 1 glutamine amidotransferase NP_870721.1 6914710 D 243090 CDS NP_870722.1 32477728 1790499 complement(6915498..6915989) 1 NC_005027.1 hypothetical protein 6915989 1790499 RB12818 Rhodopirellula baltica SH 1 hypothetical protein NP_870722.1 6915498 R 243090 CDS NP_870723.1 32477729 1793828 complement(6915996..6916142) 1 NC_005027.1 hypothetical protein 6916142 1793828 RB12820 Rhodopirellula baltica SH 1 hypothetical protein NP_870723.1 6915996 R 243090 CDS NP_870724.1 32477730 1793770 complement(6916205..6916558) 1 NC_005027.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 6916558 rplS 1793770 rplS Rhodopirellula baltica SH 1 50S ribosomal protein L19 NP_870724.1 6916205 R 243090 CDS NP_870725.1 32477731 1790914 complement(6916578..6917306) 1 NC_005027.1 PMID: 6357787 PMID: 6337136 best DB hits: BLAST: ddbj:BAB06198.1; (AP001515) tRNA methyltransferase [Bacillus; E=8e-56 swissprot:O31741; TRMD_BACSU TRNA (GUANINE-N1)-METHYLTRANSFERASE; E=3e-54 gb:AAK05662.1; AE006387_5 (AE006387) tRNA methyltransferase; E=7e-54 COG: BH2479; COG0336 tRNA-(guanine-N1)-methyltransferase; E=8e-57 PFAM: PF01746; tRNA (Guanine-1)-methyltransferas; E=2.7e-101; tRNA (guanine-N(1))-methyltransferase 6917306 trmD 1790914 trmD Rhodopirellula baltica SH 1 tRNA (guanine-N(1))-methyltransferase NP_870725.1 6916578 R 243090 CDS NP_870726.1 32477732 1793446 complement(6917303..6917743) 1 NC_005027.1 PMID: 6357787 PMID: 8730873 best DB hits: BLAST: pir:T05282; ribosomal protein S16, organellar - Arabidopsis; E=3e-15 gb:AAK05667.1; AE006387_10 (AE006387) 30S ribosomal protein S16; E=7e-14 ddbj:BAA97024.1; (AB024035) 30S ribosomal protein S16; E=1e-13 COG: BH2483; COG0228 Ribosomal protein S16; E=2e-14 PFAM: PF00886; Ribosomal protein S16; E=1.8e-20; 30S ribosomal protein S16 6917743 rpsP 1793446 rpsP Rhodopirellula baltica SH 1 30S ribosomal protein S16 NP_870726.1 6917303 R 243090 CDS NP_870727.1 32477733 1795912 complement(6917834..6919309) 1 NC_005027.1 PMID: 6357787 PMID: 1279430 best DB hits: BLAST: pir:F72236; signal recognition particle protein - Thermotoga; E=2e-87 ddbj:BAB06203.1; (AP001515) signal recognition particle [Bacillus; E=2e-85 gb:AAF69242.1; AF173880_5 (AF173880) signal recognition particle; E=3e-84 COG: TM1565; COG0541 Signal recognition particle GTPase; E=2e-88 PFAM: PF02881; SRP54-type protein, helical b; E=8.8e-21 PF02223; Thymidylate kinase; E=0.33 PF00485; Phosphoribulokinase / Uridine; E=0.03; signal recognition particle protein 6919309 ffh 1795912 ffh Rhodopirellula baltica SH 1 signal recognition particle protein NP_870727.1 6917834 R 243090 CDS NP_870728.1 32477734 1795003 complement(6919361..6919729) 1 NC_005027.1 signal peptide 6919729 1795003 RB12827 Rhodopirellula baltica SH 1 signal peptide NP_870728.1 6919361 R 243090 CDS NP_870729.1 32477735 1793980 6919813..6920292 1 NC_005027.1 hypothetical protein 6920292 1793980 RB12829 Rhodopirellula baltica SH 1 hypothetical protein NP_870729.1 6919813 D 243090 CDS NP_870730.1 32477736 1792816 complement(6920200..6920508) 1 NC_005027.1 hypothetical protein 6920508 1792816 RB12830 Rhodopirellula baltica SH 1 hypothetical protein NP_870730.1 6920200 R 243090 CDS NP_870731.1 32477737 1792760 complement(6920532..6921326) 1 NC_005027.1 PMID: 8813763 best DB hits: BLAST: pir:G69148; dolichyl-phosphate mannose synthase related protein 1 -; E=2e-19 pir:D69148; dolichyl-phosphate mannose synthase related protein 2 -; E=5e-18 embl:CAB61668.1; (AL133213) glycosyl transferase.; E=7e-18 COG: MTH377; COG0463 Glycosyltransferases involved in cell wall; E=2e-20 PFAM: PF00535; Glycosyl transferase; E=1.8e-23; dolichyl-phosphate mannose synthase 6921326 1792760 RB12831 Rhodopirellula baltica SH 1 dolichyl-phosphate mannose synthase NP_870731.1 6920532 R 243090 CDS NP_870732.1 32477738 1794260 6921305..6921634 1 NC_005027.1 hypothetical protein 6921634 1794260 RB12833 Rhodopirellula baltica SH 1 hypothetical protein NP_870732.1 6921305 D 243090 CDS NP_870733.1 32477739 1795882 6921619..6921735 1 NC_005027.1 hypothetical protein 6921735 1795882 RB12836 Rhodopirellula baltica SH 1 hypothetical protein NP_870733.1 6921619 D 243090 CDS NP_870734.1 32477740 1790498 6921732..6921929 1 NC_005027.1 hypothetical protein 6921929 1790498 RB12837 Rhodopirellula baltica SH 1 hypothetical protein NP_870734.1 6921732 D 243090 CDS NP_870735.1 32477741 1794830 6921934..6922611 1 NC_005027.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 6922611 rplA 1794830 rplA Rhodopirellula baltica SH 1 50S ribosomal protein L1 NP_870735.1 6921934 D 243090 CDS NP_870736.1 32477742 1793863 6922785..6923309 1 NC_005027.1 PMID: 8969501 best DB hits: BLAST: pir:T01743; ribosomal protein L10, chloroplast - common tobacco; E=3e-08 swissprot:P42923; RL10_BACSU 50S RIBOSOMAL PROTEIN L10 (BL5) (COLD; E=3e-08 gb:AAK05367.1; AE006359_5 (AE006359) 50S ribosomal protein L10; E=8e-08 COG: BS_rplJ; COG0244 Ribosomal protein L10; E=3e-09; 50S ribosomal protein L10 6923309 rplJ 1793863 rplJ Rhodopirellula baltica SH 1 50S ribosomal protein L10 NP_870736.1 6922785 D 243090 CDS NP_870737.1 32477743 1790938 6923401..6923823 1 NC_005027.1 PMID: 10488095 best DB hits: BLAST: pir:S30199; ribosomal protein L12.1 precursor, chloroplast - rye; E=3e-09 embl:CAA44226.1; (X62368) ribosomal protein L12-1a [Nicotiana; E=2e-08 prf:0601198A; polymerase beta,RNA [Escherichia coli]; E=4e-08 COG: aq_1937; COG0222 Ribosomal protein L7/L12; E=3e-07 PFAM: PF00542; Ribosomal protein L7/L12 C-term; E=4.6e-28; 50S ribosomal protein L7/L12 6923823 rplL 1790938 rplL Rhodopirellula baltica SH 1 50S ribosomal protein L7/L12 NP_870737.1 6923401 D 243090 CDS NP_870738.1 32477744 1795696 complement(6923880..6923996) 1 NC_005027.1 hypothetical protein 6923996 1795696 RB12843 Rhodopirellula baltica SH 1 hypothetical protein NP_870738.1 6923880 R 243090 CDS NP_870739.1 32477745 1794805 6924096..6925124 1 NC_005027.1 hypothetical protein 6925124 1794805 RB12844 Rhodopirellula baltica SH 1 hypothetical protein NP_870739.1 6924096 D 243090 CDS NP_870740.1 32477746 1795921 complement(6925127..6925516) 1 NC_005027.1 hypothetical protein 6925516 1795921 RB12847 Rhodopirellula baltica SH 1 hypothetical protein NP_870740.1 6925127 R 243090 CDS NP_870741.1 32477747 1793554 complement(6925624..6926553) 1 NC_005027.1 PMID: 11759840 best DB hits: BLAST: embl:CAB93418.1; (AL357524) transposase [Streptomyces; E=0.60; transposase 6926553 1793554 RB12850 Rhodopirellula baltica SH 1 transposase NP_870741.1 6925624 R 243090 CDS NP_870742.1 32477748 1793288 6926556..6926885 1 NC_005027.1 hypothetical protein 6926885 1793288 RB12851 Rhodopirellula baltica SH 1 hypothetical protein NP_870742.1 6926556 D 243090 CDS NP_870743.1 32477749 1794365 complement(6926870..6926998) 1 NC_005027.1 hypothetical protein 6926998 1794365 RB12853 Rhodopirellula baltica SH 1 hypothetical protein NP_870743.1 6926870 R 243090 CDS NP_870744.1 32477750 1794854 complement(6927002..6928009) 1 NC_005027.1 PMID: 1624424 PMID: 8432722 best DB hits: BLAST: swissprot:P23882; FMT_ECOLI METHIONYL-TRNA FORMYLTRANSFERASE; E=1e-44 gb:AAG58409.1; AE005556_2 (AE005556); E=3e-44 pdb:2FMT; A Chain A, Methionyl-Trnafmet Formyltransferase; E=6e-44 COG: fmt; COG0223 Methionyl-tRNA formyltransferase; E=1e-45 PFAM: PF00551; Formyl transferase; E=6e-35 PF02911; Formyl transferase, C-terminal; E=6.3e-29; methionyl-tRNA formyltransferase 6928009 fmt 1794854 fmt Rhodopirellula baltica SH 1 methionyl-tRNA formyltransferase NP_870744.1 6927002 R 243090 CDS NP_870745.1 32477751 1793749 complement(6927987..6928592) 1 NC_005027.1 PMID: 8112305 best DB hits: BLAST: gb:AAG33972.1; (AF250958) peptide deformylase-like protein; E=4e-31 gb:AAG33980.1; AF269165_1 (AF269165) peptide deformylase; E=6e-31 pir:T48639; hypothetical protein T15N1.150 - Arabidopsis thaliana; E=1e-30 COG: PA0019; COG0242 N-formylmethionyl-tRNA deformylase; E=1e-26 PFAM: PF01327; Polypeptide deformylase; E=1.2e-59; peptide deformylase 6928592 def 1793749 def Rhodopirellula baltica SH 1 peptide deformylase NP_870745.1 6927987 R 243090 CDS NP_870746.1 32477752 1793692 complement(6928649..6929710) 1 NC_005027.1 PMID: 1738314 PMID: 9097039 best DB hits: BLAST: embl:CAC05751.1; (AL391751) peptide transport system; E=6e-96 ddbj:BAB07364.1; (AP001519) oligopeptide ABC transporter; E=1e-92 pir:B72424; oligopeptide ABC transporter ATP-binding protein -; E=3e-90 COG: BH3645; COG1124 ABC-type dipeptide/oligopeptide/nickel transport; E=1e-93 VNG2526G; COG1123 ATPase components of uncharacterized ABC-type; E=3e-84 BH0027; COG1124 ABC-type dipeptide/oligopeptide/nickel transport; E=3e-84 PFAM: PF00485; Phosphoribulokinase / Uridine; E=0.17 PF00004; ATPase associated with; E=0.029 PF00006; ATP synthase alpha/beta famil; E=0.25; oligopeptide transport ATP-binding protein OppF 6929710 oppF 1793692 oppF Rhodopirellula baltica SH 1 oligopeptide transport ATP-binding protein OppF NP_870746.1 6928649 R 243090 CDS NP_870747.1 32477753 1795687 complement(6929686..6930771) 1 NC_005027.1 PMID: 1738314 PMID: 1901616 best DB hits: BLAST: gb:AAG22037.1; AF305387_4 (AF305387) OppD [Bacillus thuringiensis]; E=2e-95 pir:H75380; peptide ABC transporter ATP-binding protein -; E=8e-93 gb:AAA62691.1; (M57689) sporulation protein [Bacillus subtilis]; E=1e-92 COG: DR1568; COG0444 ABC-type dipeptide/oligopeptide/nickel transport; E=7e-94 Rv1281c; COG1123 ATPase components of uncharacterized ABC-type; E=5e-80 TM1064; COG0444 ABC-type dipeptide/oligopeptide/nickel transport; E=1e-78 PFAM: PF01580; FtsK/SpoIIIE family; E=0.62 PF00005; ABC transporter; E=2.3e-63; oligopeptide transport ATP-binding protein OppD 6930771 oppD 1795687 oppD Rhodopirellula baltica SH 1 oligopeptide transport ATP-binding protein OppD NP_870747.1 6929686 R 243090 CDS NP_870748.1 32477754 1794594 complement(6930768..6932003) 1 NC_005027.1 PMID: 1738314 PMID: 1901616 best DB hits: BLAST: pir:D82242; oligopeptide ABC transporter, permease VC1093; E=4e-50 swissprot:P45053; OPPC_HAEIN OLIGOPEPTIDE TRANSPORT SYSTEM; E=1e-46 pir:D70141; oligopeptide ABC transporter, permease (oppC-1); E=5e-46 COG: VC1093; COG1173 ABC-type dipeptide/oligopeptide/nickel transport; E=4e-51 PFAM: PF00528; Binding-protein-dependent transpor; E=9.1e-10; oligopeptide transport system permease OppC 6932003 oppC 1794594 oppC Rhodopirellula baltica SH 1 oligopeptide transport system permease OppC NP_870748.1 6930768 R 243090 CDS NP_870749.1 32477755 1795631 complement(6932000..6932929) 1 NC_005027.1 PMID: 1738314 PMID: 2187863 best DB hits: BLAST: ddbj:BAA14776.1; (D90763) Oligopeptide transport system permease; E=8e-56 swissprot:P31132; OPPB_ECOLI OLIGOPEPTIDE TRANSPORT SYSTEM; E=1e-55 pir:B38447; oligopeptide permease oppB homolog - Bacillus subtilis; E=2e-55 COG: oppB; COG0601 ABC-type dipeptide/oligopeptide/nickel transport; E=1e-56 PFAM: PF00528; Binding-protein-dependent transpor; E=0.00032; oligopeptide transport system permease OppB 6932929 oppB 1795631 oppB Rhodopirellula baltica SH 1 oligopeptide transport system permease OppB NP_870749.1 6932000 R 243090 CDS NP_870750.1 32477756 1794382 complement(6932926..6934893) 1 NC_005027.1 PMID: 1738314 PMID: 1901616 best DB hits: BLAST: swissprot:P24141; OPPA_BACSU OLIGOPEPTIDE-BINDING PROTEIN OPPA; E=1e-60 pir:A38447; oligopeptide ABC transport system substrate-binding; E=1e-60 embl:CAB96044.1; (AJ250012) surface antigen [Borrelia afzelii]; E=6e-60 COG: BS_oppA; COG0747 ABC-type dipeptide/oligopeptide/nickel transport; E=1e-61 PFAM: PF00496; Bacterial extracellular solute-bind; E=1.3e-13; oligopeptide-binding protein OppA 6934893 oppA 1794382 oppA Rhodopirellula baltica SH 1 oligopeptide-binding protein OppA NP_870750.1 6932926 R 243090 CDS NP_870751.1 32477757 1793606 6934850..6935002 1 NC_005027.1 hypothetical protein 6935002 1793606 RB12863 Rhodopirellula baltica SH 1 hypothetical protein NP_870751.1 6934850 D 243090 CDS NP_870752.1 32477758 1794985 complement(6935038..6936231) 1 NC_005027.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 6936231 aspC 1794985 aspC Rhodopirellula baltica SH 1 aromatic amino acid aminotransferase NP_870752.1 6935038 R 243090 CDS NP_870753.1 32477759 1795684 6936276..6937397 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: swissprot:P73079; YK42_SYNY3 HYPOTHETICAL 31.9 KD PROTEIN SLR2042; E=5e-19 pir:B83141; conserved hypothetical protein PA4030 [imported] -; E=3e-13 pir:C64962; probable membrane protein b1976 - Escherichia coli; E=5e-08 COG: slr2042; COG3228 Uncharacterized BCR; E=5e-20 TP0379; COG0653 Preprotein translocase subunit SecA (ATPase, RNA; E=0.001 yecA; COG3318 Predicted metal-binding protein related to the; E=0.002 PFAM: PF02810; SEC-C motif; E=5.3e-08; hypothetical protein 6937397 1795684 RB12866 Rhodopirellula baltica SH 1 hypothetical protein NP_870753.1 6936276 D 243090 CDS NP_870754.1 32477760 1793703 6937519..6937905 1 NC_005027.1 hypothetical protein 6937905 1793703 RB12870 Rhodopirellula baltica SH 1 hypothetical protein NP_870754.1 6937519 D 243090 CDS NP_870755.1 32477761 1791474 6937857..6938225 1 NC_005027.1 hypothetical protein 6938225 1791474 RB12873 Rhodopirellula baltica SH 1 hypothetical protein NP_870755.1 6937857 D 243090 CDS NP_870756.1 32477762 1793994 6938177..6938368 1 NC_005027.1 hypothetical protein 6938368 1793994 RB12874 Rhodopirellula baltica SH 1 hypothetical protein NP_870756.1 6938177 D 243090 CDS NP_870757.1 32477763 1794758 complement(6938351..6939466) 1 NC_005027.1 hypothetical protein 6939466 1794758 RB12875 Rhodopirellula baltica SH 1 hypothetical protein NP_870757.1 6938351 R 243090 CDS NP_870758.1 32477764 1790869 complement(6939536..6939817) 1 NC_005027.1 hypothetical protein 6939817 1790869 RB12877 Rhodopirellula baltica SH 1 hypothetical protein NP_870758.1 6939536 R 243090 CDS NP_870759.1 32477765 1795365 complement(6939821..6939985) 1 NC_005027.1 hypothetical protein 6939985 1795365 RB12879 Rhodopirellula baltica SH 1 hypothetical protein NP_870759.1 6939821 R 243090 CDS NP_870760.1 32477766 1791640 complement(6940037..6940450) 1 NC_005027.1 PMID: 7699720 best DB hits: BLAST: gb:AAD20723.1; (AF051157) response regulator homolog OmpR [Vibrio; E=5e-09 pir:C82042; transcriptional regulator OmpR VC2714 [imported] - Vibrio; E=6e-09 pir:S42745; nitrogen assimilation regulatory protein ntrC -; E=9e-09 COG: VC2714; COG0745 Response regulators consisting of a CheY-like; E=6e-10 ompR; COG0745 Response regulators consisting of a CheY-like receiver; E=3e-09 slr0322_2; COG0784 CheY-like receiver domains; E=7e-09 PFAM: PF00072; Response regulator receiver doma; E=1.7e-20; two-component response regulator 6940450 1791640 RB12881 Rhodopirellula baltica SH 1 two-component response regulator NP_870760.1 6940037 R 243090 CDS NP_870761.1 32477767 1792206 6940549..6941553 1 NC_005027.1 best DB hits: PFAM: PF00515; TPR Domain; E=0.058; hypothetical protein 6941553 1792206 RB12882 Rhodopirellula baltica SH 1 hypothetical protein NP_870761.1 6940549 D 243090 CDS NP_870762.1 32477768 1790244 6941550..6942554 1 NC_005027.1 PMID: 9660827 best DB hits: BLAST: ddbj:BAB06261.1; (AP001515) BH2542~unknown conserved protein; E=1e-53 swissprot:O50310; YBC5_CHLVI HYPOTHETICAL 36.7 KD PROTEIN IN BCHI; E=1e-53 pir:F72373; conserved hypothetical protein - Thermotoga maritima; E=2e-53 COG: BH2542; COG0564 Pseudouridylate synthases, 23S RNA-specific; E=9e-55 PFAM: PF01479; S4 domain; E=0.0017 PF00849; RNA pseudouridylate synthase; E=7.8e-61; ribosomal large subunit pseudouridine synthase 6942554 rluD 1790244 rluD Rhodopirellula baltica SH 1 ribosomal large subunit pseudouridine synthase NP_870762.1 6941550 D 243090 CDS NP_870763.1 32477769 1795377 6942523..6943383 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: gb:AAF12561.1; AE001826_30 (AE001826) conserved hypothetical; E=4e-13 swissprot:P76262; YOAE_ECOLI HYPOTHETICAL 56.5 KD PROTEIN IN; E=2e-12 gb:AAG56805.1; AE005404_8 (AE005404) transport protein; E=2e-12 COG: DRB0131; COG0861 Membrane protein TerC, possibly involved in; E=4e-14 ygdQ; COG0861 Membrane protein TerC, possibly involved in tellurium; E=7e-10 yegH_1; COG0861 Membrane protein TerC, possibly involved in; E=5e-09; hypothetical protein 6943383 1795377 RB12886 Rhodopirellula baltica SH 1 hypothetical protein NP_870763.1 6942523 D 243090 CDS NP_870764.1 32477770 1795470 6943463..6944401 1 NC_005027.1 hypothetical protein 6944401 1795470 RB12890 Rhodopirellula baltica SH 1 hypothetical protein NP_870764.1 6943463 D 243090 CDS NP_870765.1 32477771 1793686 6944411..6945187 1 NC_005027.1 best DB hits: BLAST: gb:AAC14880.1; (AF060080) hypothetical protein [Chlorobium; E=1e-06 pir:C75001; hypothetical protein PAB1341 - Pyrococcus abyssi (strain; E=3e-06 embl:CAB66204.1; (AL136502) hypothetical protein SCF43.15c.; E=5e-05 COG: PAB1341; COG2120 Uncharacterized proteins, LmbE homologs; E=3e-07 PFAM: PF02585; Uncharacterized LmbE-like protein, C; E=1.1e-05; hypothetical protein 6945187 1793686 RB12891 Rhodopirellula baltica SH 1 hypothetical protein NP_870765.1 6944411 D 243090 CDS NP_870766.1 32477772 1792368 6945243..6945632 1 NC_005027.1 hypothetical protein 6945632 1792368 RB12892 Rhodopirellula baltica SH 1 hypothetical protein NP_870766.1 6945243 D 243090 CDS NP_870767.1 32477773 1793471 6945636..6946097 1 NC_005027.1 hypothetical protein 6946097 1793471 RB12895 Rhodopirellula baltica SH 1 hypothetical protein NP_870767.1 6945636 D 243090 CDS NP_870768.1 32477774 1794671 complement(6946117..6947028) 1 NC_005027.1 signal peptide 6947028 1794671 RB12897 Rhodopirellula baltica SH 1 signal peptide NP_870768.1 6946117 R 243090 CDS NP_870769.1 32477775 1791309 complement(6947212..6948129) 1 NC_005027.1 PMID: 7774814 best DB hits: BLAST: pir:T36501; probable serinethreonine protein kinase - Streptomyces; E=1e-18 pir:H75566; probable serinethreonine protein kinase - Deinococcus; E=3e-17 swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=6e-17 COG: DR0058_1; COG0515 Serine/threonine protein kinases; E=3e-18 PFAM: PF00231; ATP synthase; E=0.83 PF00069; Protein kinase domain; E=5.8e-27; serine/threonine-protein kinase 6948129 1791309 RB12902 Rhodopirellula baltica SH 1 serine/threonine-protein kinase NP_870769.1 6947212 R 243090 CDS NP_870770.1 32477776 1790530 complement(6948133..6949071) 1 NC_005027.1 PMID: 1355086 best DB hits: BLAST: swissprot:Q54776; ACCD_SYNP7 ACETYL-COENZYME A CARBOXYLASE; E=1e-71 swissprot:Q57417; ACCD_SYNY3 ACETYL-COENZYME A CARBOXYLASE; E=1e-69 gb:AAC08084.1; (U38804) acetyl-CoA carboxylase carboxytransferase; E=2e-68 COG: sll0336; COG0777 Acetyl-CoA carboxylase beta subunit; E=1e-70 PFAM: PF00790; VHS domain; E=0.27 PF01039; Carboxyl transferase domain; E=0.037; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta 6949071 accD 1790530 accD Rhodopirellula baltica SH 1 acetyl-coenzyme A carboxylase carboxyl transferase subunit beta NP_870770.1 6948133 R 243090 CDS NP_870771.1 32477777 1793417 complement(6949080..6950939) 1 NC_005027.1 PMID: 1896019 best DB hits: BLAST: swissprot:P27819; ILV3_BRANA ACETOLACTATE SYNTHASE III,; E=1e-167 swissprot:P27818; ILV1_BRANA ACETOLACTATE SYNTHASE I, CHLOROPLAST; E=1e-167 pir:S15004; acetolactate synthase (EC 4.1.3.18) 2 precursor - rape; E=1e-167 COG: AF1720; COG0028 Thiamine pyrophosphate-requiring enzymes; E=1e-129 ilvG; COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate; E=1e-123 slr2088; COG0028 Thiamine pyrophosphate-requiring enzymes; E=1e-121 PFAM: PF02776; Thiamine pyrophosphate enzyme,; E=9.8e-87 PF00205; Thiamine pyrophosphate enzyme,; E=1.2e-55 PF02775; Thiamine pyrophosphate enzyme,; E=7.1e-89; acetolactate synthase III [precursor] 6950939 1793417 RB12905 Rhodopirellula baltica SH 1 acetolactate synthase III [precursor] NP_870771.1 6949080 R 243090 CDS NP_870772.1 32477778 1790068 6950775..6951461 1 NC_005027.1 best DB hits: PFAM: PF02537; CrcB-like protein; E=0.02; hypothetical protein 6951461 1790068 RB12907 Rhodopirellula baltica SH 1 hypothetical protein NP_870772.1 6950775 D 243090 CDS NP_870773.1 32477779 1792856 6951125..6954388 1 NC_005027.1 PMID: 10984043 best DB hits: BLAST: pir:D83260; hypothetical protein PA3080 [imported] - Pseudomonas; E=1e-04 gb:AAK01518.1; (AF241171) oxidoreductase [Pseudomonas; E=0.38 PFAM: PF02012; BNR repeat; E=0.027; hypothetical protein 6954388 1792856 RB12908 Rhodopirellula baltica SH 1 hypothetical protein NP_870773.1 6951125 D 243090 CDS NP_870774.1 32477780 1791834 6954389..6955507 1 NC_005027.1 hypothetical protein 6955507 1791834 RB12915 Rhodopirellula baltica SH 1 hypothetical protein NP_870774.1 6954389 D 243090 CDS NP_870775.1 32477781 1793023 complement(6955674..6957020) 1 NC_005027.1 signal peptide 6957020 1793023 RB12918 Rhodopirellula baltica SH 1 signal peptide NP_870775.1 6955674 R 243090 CDS NP_870776.1 32477782 1790197 6957196..6959247 1 NC_005027.1 PMID: 7859749 best DB hits: BLAST: swissprot:P45694; TKT_BACSU TRANSKETOLASE ----- pir: G69723; E=1e-171 ddbj:BAB06071.1; (AP001515) transketolase [Bacillus halodurans]; E=1e-169 swissprot:Q43848; TKTC_SOLTU TRANSKETOLASE, CHLOROPLAST PRECURSOR; E=1e-164 COG: BS_tkt; COG0021 Transketolase; E=1e-172 PFAM: PF00456; Transketolase, thiamine dipho; E=1.1e-160 PF02779; Transketolase, central domain; E=1.2e-77 PF02780; Transketolase, C-terminal dom; E=1.1e-49; transketolase 6959247 tkt 1790197 tkt Rhodopirellula baltica SH 1 transketolase NP_870776.1 6957196 D 243090 CDS NP_870777.1 32477783 1794174 6959448..6960761 1 NC_005027.1 PMID: 3058695 PMID: 10364182 best DB hits: BLAST: swissprot:P73290; PURA_SYNY3 ADENYLOSUCCINATE SYNTHETASE; E=8e-98 swissprot:Q9X8P6; PURA_STRCO ADENYLOSUCCINATE SYNTHETASE; E=7e-94 swissprot:O08381; PURA_MYCTU ADENYLOSUCCINATE SYNTHETASE; E=1e-93 COG: Rv0357c; COG0104 Adenylosuccinate synthase; E=1e-94 PFAM: PF00709; Adenylosuccinate synthetase; E=5.7e-66; adenylosuccinate synthetase 6960761 purA 1794174 purA Rhodopirellula baltica SH 1 adenylosuccinate synthetase NP_870777.1 6959448 D 243090 CDS NP_870778.1 32477784 1792706 complement(6960879..6960998) 1 NC_005027.1 hypothetical protein 6960998 1792706 RB12925 Rhodopirellula baltica SH 1 hypothetical protein NP_870778.1 6960879 R 243090 CDS NP_870779.1 32477785 1791380 complement(6961042..6961533) 1 NC_005027.1 hypothetical protein 6961533 1791380 RB12926 Rhodopirellula baltica SH 1 hypothetical protein NP_870779.1 6961042 R 243090 CDS NP_870780.1 32477786 1794800 6961579..6962727 1 NC_005027.1 PMID: 9324260 best DB hits: BLAST: pir:T35155; hypothetical protein SC5A7.06c SC5A7.06c - Streptomyces; E=2e-36 gb:AAF26905.1; AF210843_2 (AF210843) unknown [Sorangium; E=9e-34 swissprot:Q11037; YD67_MYCTU HYPOTHETICAL 41.3 KDA PROTEIN RV1367C; E=4e-31 COG: Rv1367c; COG1680 Beta-lactamase class C and other penicillin binding; E=3e-32; beta-lactamase or penicillin-binding protein 6962727 1794800 RB12928 Rhodopirellula baltica SH 1 beta-lactamase or penicillin-binding protein NP_870780.1 6961579 D 243090 CDS NP_870781.1 32477787 1794793 complement(6963015..6963242) 1 NC_005027.1 hypothetical protein 6963242 1794793 RB12932 Rhodopirellula baltica SH 1 hypothetical protein NP_870781.1 6963015 R 243090 CDS NP_870782.1 32477788 1795597 complement(6963268..6964029) 1 NC_005027.1 PMID: 9537320 best DB hits: BLAST: swissprot:O66631; Y274_AQUAE HYPOTHETICAL PROTEIN AQ_274 -----; E=4e-28 embl:CAA75617.1; (Y15422) hypothetical protein [Lactococcus; E=1e-26 pir:B72217; conserved hypothetical protein - Thermotoga maritima; E=2e-26 COG: aq_274; COG0325 Predicted enzyme with a TIM-barrel fold; E=4e-29 PFAM: PF01168; Uncharacterized protein family UPF00; E=9e-11; hypothetical protein 6964029 1795597 RB12934 Rhodopirellula baltica SH 1 hypothetical protein NP_870782.1 6963268 R 243090 CDS NP_870783.1 32477789 1795685 complement(6964130..6965872) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:H75280; conserved hypothetical protein - Deinococcus radiodurans; E=5e-27 swissprot:P71551; Y959_MYCTU HYPOTHETICAL 74.6 KDA PROTEIN RV0959; E=5e-21 gb:AAB89815.1; (AE001004) A. fulgidus predicted coding region; E=0.013 COG: AF1444; COG2304 Protein containing von Willebrand factor (vWF) type; E=0.001; hypothetical protein 6965872 1795685 RB12936 Rhodopirellula baltica SH 1 hypothetical protein NP_870783.1 6964130 R 243090 CDS NP_870784.1 32477790 1795582 6966246..6966536 1 NC_005027.1 PMID: 2824781 best DB hits: BLAST: gb:AAG58100.1; AE005527_3 (AE005527) unknown protein encoded by; E=0.002 gb:AAG53987.1; AF327445_1 (AF327445) transposase A; E=0.003 gb:AAF28119.1; AF153317_15 (AF153317) InsA [Shigella; E=0.007 COG: PA1937; COG2963 Transposase; E=0.004 PFAM: PF01381; Helix-turn-helix; E=0.53 PF01527; Transposase; E=6.1e-18; transposase 6966536 1795582 RB12940 Rhodopirellula baltica SH 1 transposase NP_870784.1 6966246 D 243090 CDS NP_870785.1 32477791 1793181 6966539..6967417 1 NC_005027.1 PMID: 2824781 best DB hits: BLAST: gb:AAA88919.1; (U13013) ORFB [Leptospira interrogans]; E=3e-47 gb:AAA88916.1; (U13012) ORFB [Leptospira interrogans]; E=1e-46 gb:AAC05649.1; (AF038931) probable transposase-related protein; E=1e-45 COG: DRB0019.2; COG2801 transposase; E=1e-35 PFAM: PF00665; Integrase core domain; E=4.8e-40; transposase 6967417 1793181 RB12941 Rhodopirellula baltica SH 1 transposase NP_870785.1 6966539 D 243090 CDS NP_870786.1 32477792 1791339 complement(6967507..6969009) 1 NC_005027.1 hypothetical protein 6969009 1791339 RB12942 Rhodopirellula baltica SH 1 hypothetical protein NP_870786.1 6967507 R 243090 CDS NP_870787.1 32477793 1791714 6969132..6969560 1 NC_005027.1 PMID: 2215213 best DB hits: BLAST: swissprot:P45388; YAEJ_PSEPU HYPOTHETICAL 15.2 KD PROTEIN IN PCAJ; E=3e-16 embl:CAA63804.1; (X93605) hypothetical protein YAEJ [Zymomonas; E=7e-15 pir:A83538; conserved hypothetical protein PA0868 [imported] -; E=4e-12 COG: PA0868; COG1186 Protein chain release factor B; E=4e-13 sll1110; COG0216 Protein chain release factor A; E=0.010 PFAM: PF00472; Peptidyl-tRNA hydrolase domain; E=2.2e-09; peptidyl-tRNA hydrolase domain protein 6969560 1791714 RB12945 Rhodopirellula baltica SH 1 peptidyl-tRNA hydrolase domain protein NP_870787.1 6969132 D 243090 CDS NP_870788.1 32477794 1790438 6969668..6970402 1 NC_005027.1 best DB hits: PFAM: PF02151; UvrB/uvrC motif; E=0.0011; hypothetical protein 6970402 1790438 RB12946 Rhodopirellula baltica SH 1 hypothetical protein NP_870788.1 6969668 D 243090 CDS NP_870789.1 32477795 1793285 6970418..6971830 1 NC_005027.1 PMID: 8757734 best DB hits: BLAST: gb:AAB38420.1; (L39938) histidine protein kinase [Sinorhizobium; E=2e-16 pir:E83083; probable two-component sensor PA4494 [imported] -; E=3e-16 gb:AAA93222.1; (U22925) RegB [Rhodobacter sphaeroides]; E=2e-12 COG: PA4494; COG0642 Sensory transduction histidine kinases; E=2e-17 PFAM: PF00512; His Kinase A (phosphoacceptor; E=0.011 PF02518; Histidine kinase-, DNA gyrase; E=1.2e-28; histidine protein kinase 6971830 1793285 RB12949 Rhodopirellula baltica SH 1 histidine protein kinase NP_870789.1 6970418 D 243090 CDS NP_870790.1 32477796 1793752 6972002..6972667 1 NC_005027.1 PMID: 7699720 best DB hits: BLAST: pir:D83083; probable two-component response regulator PA4493; E=8e-30 gb:AAF87208.1; AF228577_2 (AF228577) ActR [Rhizobium leguminosarum; E=8e-30 swissprot:Q52913; ACTR_RHIME ACID TOLERANCE REGULATORY PROTEIN; E=1e-29 COG: PA4493; COG0784 CheY-like receiver domains; E=8e-31 TP0519; COG2204 AAA superfamily ATPases with N-terminal receiver; E=3e-12 BH3787; COG0784 CheY-like receiver domains; E=8e-11 PFAM: PF00072; Response regulator receiver doma; E=2.9e-25; two-component system, regulatory protein 6972667 1793752 RB12952 Rhodopirellula baltica SH 1 two-component system, regulatory protein NP_870790.1 6972002 D 243090 CDS NP_870791.1 32477797 1792766 complement(6972882..6973667) 1 NC_005027.1 signal peptide 6973667 1792766 RB12953 Rhodopirellula baltica SH 1 signal peptide NP_870791.1 6972882 R 243090 CDS NP_870792.1 32477798 1793468 complement(6973882..6974205) 1 NC_005027.1 hypothetical protein 6974205 1793468 RB12959 Rhodopirellula baltica SH 1 hypothetical protein NP_870792.1 6973882 R 243090 CDS NP_870793.1 32477799 1792535 complement(6974274..6974942) 1 NC_005027.1 signal peptide 6974942 1792535 RB12961 Rhodopirellula baltica SH 1 signal peptide NP_870793.1 6974274 R 243090 CDS NP_870794.1 32477800 1790437 6975006..6975179 1 NC_005027.1 hypothetical protein 6975179 1790437 RB12962 Rhodopirellula baltica SH 1 hypothetical protein NP_870794.1 6975006 D 243090 CDS NP_870795.1 32477801 1793025 complement(6975121..6976236) 1 NC_005027.1 best DB hits: BLAST: swissprot:O34617; YLON_BACSU HYPOTHETICAL 41.6 KDA PROTEIN IN; E=1e-73 pir:B81098; conserved hypothetical protein NMB1308 [imported] -; E=1e-69 pir:F81843; conserved hypothetical protein NMA1522 [imported] -; E=2e-69 COG: BS_yloN; COG0820 Predicted Fe-S oxidoreductase; E=1e-74; Fe-S oxidoreductase 6976236 1793025 RB12963 Rhodopirellula baltica SH 1 Fe-S oxidoreductase NP_870795.1 6975121 R 243090 CDS NP_870796.1 32477802 1793321 complement(6976376..6977047) 1 NC_005027.1 signal peptide 6977047 1793321 RB12965 Rhodopirellula baltica SH 1 signal peptide NP_870796.1 6976376 R 243090 CDS NP_870797.1 32477803 1790085 6977141..6979138 1 NC_005027.1 signal peptide 6979138 1790085 RB12968 Rhodopirellula baltica SH 1 signal peptide NP_870797.1 6977141 D 243090 CDS NP_870798.1 32477804 1794198 complement(6979262..6979462) 1 NC_005027.1 hypothetical protein 6979462 1794198 RB12971 Rhodopirellula baltica SH 1 hypothetical protein NP_870798.1 6979262 R 243090 CDS NP_870799.1 32477805 1790187 6979436..6979588 1 NC_005027.1 hypothetical protein 6979588 1790187 RB12972 Rhodopirellula baltica SH 1 hypothetical protein NP_870799.1 6979436 D 243090 CDS NP_870800.1 32477806 1793198 complement(6979647..6979847) 1 NC_005027.1 hypothetical protein 6979847 1793198 RB12974 Rhodopirellula baltica SH 1 hypothetical protein NP_870800.1 6979647 R 243090 CDS NP_870801.1 32477807 1792981 complement(6979844..6980053) 1 NC_005027.1 hypothetical protein 6980053 1792981 RB12975 Rhodopirellula baltica SH 1 hypothetical protein NP_870801.1 6979844 R 243090 CDS NP_870802.1 32477808 1795240 complement(6980057..6980722) 1 NC_005027.1 hypothetical protein 6980722 1795240 RB12978 Rhodopirellula baltica SH 1 hypothetical protein NP_870802.1 6980057 R 243090 CDS NP_870803.1 32477809 1790231 complement(6980707..6981480) 1 NC_005027.1 hypothetical protein 6981480 1790231 RB12982 Rhodopirellula baltica SH 1 hypothetical protein NP_870803.1 6980707 R 243090 CDS NP_870804.1 32477810 1792074 complement(6981461..6983911) 1 NC_005027.1 hypothetical protein 6983911 1792074 RB12984 Rhodopirellula baltica SH 1 hypothetical protein NP_870804.1 6981461 R 243090 CDS NP_870805.1 32477811 1792648 complement(6983806..6984744) 1 NC_005027.1 hypothetical protein 6984744 1792648 RB12989 Rhodopirellula baltica SH 1 hypothetical protein NP_870805.1 6983806 R 243090 CDS NP_870806.1 32477812 1793114 complement(6984741..6986603) 1 NC_005027.1 best DB hits: BLAST: gb:AAG56658.1; AE005390_5 (AE005390) oxidoreductase, Fe-S; E=2e-16 pir:G64924; nrfC protein homolog b1671 - Escherichia coli -----; E=4e-16 gb:AAG57820.1; AE005499_7 (AE005499) involved in electron; E=3e-15 COG: ydhX; COG0437 Fe-S-cluster-containing hydrogenase components 1; E=4e-17 hydN; COG1142 Fe-S-cluster-containing hydrogenase components 2; E=3e-16 AF0157; COG0437 Fe-S-cluster-containing hydrogenase components 1; E=8e-14 PFAM: PF00027; Cyclic nucleotide-binding domain; E=0.0017 PF00037; 4Fe-4S binding domain; E=0.31; oxidoreductase, Fe-S subunit 6986603 1793114 RB12994 Rhodopirellula baltica SH 1 oxidoreductase, Fe-S subunit NP_870806.1 6984741 R 243090 CDS NP_870807.1 32477813 1793441 6986566..6987102 1 NC_005027.1 hypothetical protein 6987102 1793441 RB12997 Rhodopirellula baltica SH 1 hypothetical protein NP_870807.1 6986566 D 243090 CDS NP_870808.1 32477814 1793958 6986660..6987166 1 NC_005027.1 hypothetical protein 6987166 1793958 RB12998 Rhodopirellula baltica SH 1 hypothetical protein NP_870808.1 6986660 D 243090 CDS NP_870809.1 32477815 1791831 complement(6986738..6987157) 1 NC_005027.1 hypothetical protein 6987157 1791831 RB12999 Rhodopirellula baltica SH 1 hypothetical protein NP_870809.1 6986738 R 243090 CDS NP_870810.1 32477816 1795595 6987235..6987843 1 NC_005027.1 hypothetical protein 6987843 1795595 RB13001 Rhodopirellula baltica SH 1 hypothetical protein NP_870810.1 6987235 D 243090 CDS NP_870811.1 32477817 1792635 complement(6987708..6988877) 1 NC_005027.1 PMID: 10731132 best DB hits: BLAST: gb:AAF50733.1; (AE003564) CG10487 gene product [Drosophila; E=0.003 ddbj:BAA34290.1; (AB014769) glutaminyl cyclase [Bothrops; E=0.005 embl:CAA50438.1; (X71125) glutaminyl-peptide cyclotransferase; E=0.44; glutaminyl cyclase 6988877 1792635 RB13002 Rhodopirellula baltica SH 1 glutaminyl cyclase NP_870811.1 6987708 R 243090 CDS NP_870812.1 32477818 1791013 6989296..6989862 1 NC_005027.1 hypothetical protein 6989862 1791013 RB13004 Rhodopirellula baltica SH 1 hypothetical protein NP_870812.1 6989296 D 243090 CDS NP_870813.1 32477819 1790226 6989994..6991808 1 NC_005027.1 PMID: 8905232 best DB hits: BLAST: swissprot:P77234; YBEQ_ECOLI HYPOTHETICAL 37.3 KDA PROTEIN IN; E=8e-40 gb:AAD41587.1; AF057704_3 (AF057704) enhanced entry protein EnhC; E=1e-37 pir:T46587; hypothetical protein [imported] - Vogesella indigofera; E=1e-35 COG: ybeQ; COG0790 TPR repeat proteins; E=7e-41; hypothetical protein 6991808 1790226 RB13005 Rhodopirellula baltica SH 1 hypothetical protein NP_870813.1 6989994 D 243090 CDS NP_870814.1 32477820 1794118 6992010..6992489 1 NC_005027.1 hypothetical protein 6992489 1794118 RB13007 Rhodopirellula baltica SH 1 hypothetical protein NP_870814.1 6992010 D 243090 CDS NP_870815.1 32477821 1793969 6992499..6993194 1 NC_005027.1 hypothetical protein 6993194 1793969 RB13011 Rhodopirellula baltica SH 1 hypothetical protein NP_870815.1 6992499 D 243090 CDS NP_870816.1 32477822 1793246 6993210..6993407 1 NC_005027.1 hypothetical protein 6993407 1793246 RB13012 Rhodopirellula baltica SH 1 hypothetical protein NP_870816.1 6993210 D 243090 CDS NP_870817.1 32477823 1794637 6993313..6994083 1 NC_005027.1 signal peptide 6994083 1794637 RB13013 Rhodopirellula baltica SH 1 signal peptide NP_870817.1 6993313 D 243090 CDS NP_870818.1 32477824 1793818 complement(6994107..6994286) 1 NC_005027.1 hypothetical protein 6994286 1793818 RB13015 Rhodopirellula baltica SH 1 hypothetical protein NP_870818.1 6994107 R 243090 CDS NP_870819.1 32477825 1791188 complement(6994318..6994536) 1 NC_005027.1 hypothetical protein 6994536 1791188 RB13016 Rhodopirellula baltica SH 1 hypothetical protein NP_870819.1 6994318 R 243090 CDS NP_870820.1 32477826 1793616 6994546..6994938 1 NC_005027.1 signal peptide 6994938 1793616 RB13017 Rhodopirellula baltica SH 1 signal peptide NP_870820.1 6994546 D 243090 CDS NP_870821.1 32477827 1790579 6995065..6995838 1 NC_005027.1 PMID: 10731132 best DB hits: BLAST: gb:AAF82144.1; AC034256_8 (AC034256) Contains similarity to F-box; E=2e-07 gb:AAF44956.1; AE003406_161 (AE003416) symbol=BG:DS07108.4; E=1e-04 gb:AAF53475.1; (AE003648) BG:DS07108.4 gene product [Drosophila; E=1e-04; receptor protein kinase 6995838 1790579 RB13021 Rhodopirellula baltica SH 1 receptor protein kinase NP_870821.1 6995065 D 243090 CDS NP_870822.1 32477828 1790413 6995860..6996282 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S76466; hypothetical protein sll1853 - Synechocystis sp. (strain; E=6e-18; hypothetical protein 6996282 1790413 RB13024 Rhodopirellula baltica SH 1 hypothetical protein NP_870822.1 6995860 D 243090 CDS NP_870823.1 32477829 1794164 complement(6996438..6997019) 1 NC_005027.1 PMID: 1444267 best DB hits: BLAST: pir:D83229; probable FAD-dependent monooxygenase PA3328 [imported] -; E=1e-07 pir:H70986; probable hyroxylase - Mycobacterium tuberculosis (strain; E=2e-07 pir:T35323; probable hydroxylase - Streptomyces coelicolor -----; E=1e-06 COG: PA3328; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related; E=1e-08 BS_yetM; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and; E=2e-04 PA2587; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related; E=5e-04 PFAM: PF01360; Monooxygenase; E=2.8e-12; monooxygenase 6997019 1794164 RB13025 Rhodopirellula baltica SH 1 monooxygenase NP_870823.1 6996438 R 243090 CDS NP_870824.1 32477830 1791726 complement(6997071..6997664) 1 NC_005027.1 PMID: 1444267 best DB hits: BLAST: pir:T37167; probable oxidoreductase - Streptomyces coelicolor; E=4e-08 gb:AAD25066.1; AF121000_13 (AF121000) oxidoreductase; E=0.001 pir:D83122; probable FAD-dependent monooxygenase PA4190 [imported] -; E=0.004 COG: PA4190; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related; E=4e-04 PFAM: PF01360; Monooxygenase; E=0.33; monooxygenase 6997664 1791726 RB13026 Rhodopirellula baltica SH 1 monooxygenase NP_870824.1 6997071 R 243090 CDS NP_870825.1 32477831 1790444 6997640..6998122 1 NC_005027.1 best DB hits: BLAST: ddbj:BAA92043.1; (AK002026) unnamed protein product [Homo; E=0.87 ddbj:BAB13962.1; (AK022105) unnamed protein product [Homo; E=0.87 ref:XP_012653.1; hypothetical protein FLJ11164 [Homo sapiens]; E=0.87; hypothetical protein 6998122 1790444 RB13028 Rhodopirellula baltica SH 1 hypothetical protein NP_870825.1 6997640 D 243090 CDS NP_870826.1 32477832 1793754 complement(6997760..6998164) 1 NC_005027.1 hypothetical protein 6998164 1793754 RB13029 Rhodopirellula baltica SH 1 hypothetical protein NP_870826.1 6997760 R 243090 CDS NP_870827.1 32477833 1791853 complement(6998161..6999186) 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.24; signal peptide 6999186 1791853 RB13030 Rhodopirellula baltica SH 1 signal peptide NP_870827.1 6998161 R 243090 CDS NP_870828.1 32477834 1793354 complement(6999266..7000897) 1 NC_005027.1 PMID: 9384377 best DB hits: BLAST: pir:E69759; hypothetical protein ycgR - Bacillus subtilis -----; E=5e-06 ddbj:BAB05237.1; (AP001512) BH1518~unknown conserved protein; E=2e-04 pir:H70420; conserved hypothetical protein aq_1388 - Aquifex; E=6e-04 COG: BS_ycgR; COG0701 Predicted permeases; E=4e-07; permease 7000897 1793354 RB13032 Rhodopirellula baltica SH 1 permease NP_870828.1 6999266 R 243090 CDS NP_870829.1 32477835 1792942 complement(7000894..7001859) 1 NC_005027.1 hypothetical protein 7001859 1792942 RB13035 Rhodopirellula baltica SH 1 hypothetical protein NP_870829.1 7000894 R 243090 CDS NP_870830.1 32477836 1790759 complement(7001856..7002803) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:H72289; hypothetical protein TM1132 - Thermotoga maritima; E=2e-67 pir:B71126; hypothetical protein PH0776 - Pyrococcus horikoshii; E=2e-67 ddbj:BAB04323.1; (AP001509) methanol dehydrogenase regulatory; E=8e-67 COG: TM1132; COG0714 MoxR-like ATPases; E=2e-68 PFAM: PF00004; ATPase associated with va; E=0.00018 PF01078; Magnesium chelatase, subunit Chl; E=1.5e-09; MoxR-related protein 7002803 1790759 RB13037 Rhodopirellula baltica SH 1 MoxR-related protein NP_870830.1 7001856 R 243090 CDS NP_870831.1 32477837 1792768 complement(7002800..7005061) 1 NC_005027.1 PMID: 10452618 best DB hits: BLAST: pir:D75012; hypothetical protein PAB1274 - Pyrococcus abyssi (strain; E=3e-04 gb:AAB91268.1; (AE001110) A. fulgidus predicted coding region; E=0.006 pir:F70464; hypothetical protein aq_1912 - Aquifex aeolicus -----; E=0.011 COG: PAB1274_1; COG1305 transglutaminases, cysteine; E=4e-04 PFAM: PF02553; Cobalt transport protein compo; E=0.37 PF01841; Transglutaminase-like superfam; E=0.00013; transglutaminase 7005061 1792768 RB13038 Rhodopirellula baltica SH 1 transglutaminase NP_870831.1 7002800 R 243090 CDS NP_870832.1 32477838 1795010 complement(7004997..7006247) 1 NC_005027.1 best DB hits: BLAST: pir:T34965; probable membrane protein - Streptomyces coelicolor; E=3e-08 ddbj:BAB04451.1; (AP001509) BH0732~unknown conserved protein in; E=0.002 pir:H71125; hypothetical protein PH0774 - Pyrococcus horikoshii; E=0.012 COG: BH0732; COG1721 Uncharacterized ACR; E=1e-04 PFAM: PF01882; Protein of unknown function DUF58; E=7.1e-10; hypothetical protein 7006247 1795010 RB13042 Rhodopirellula baltica SH 1 hypothetical protein NP_870832.1 7004997 R 243090 CDS NP_870833.1 32477839 1791059 complement(7006299..7006790) 1 NC_005027.1 signal peptide 7006790 1791059 RB13044 Rhodopirellula baltica SH 1 signal peptide NP_870833.1 7006299 R 243090 CDS NP_870834.1 32477840 1793019 7007007..7008356 1 NC_005027.1 best DB hits: BLAST: swissprot:P77774; YFGL_ECOLI HYPOTHETICAL 41.9 KD PROTEIN IN; E=0.006 gb:AAG57622.1; AE005480_9 (AE005480) dehydrogenase; E=0.007 gb:AAG31169.1; (AF314961) unknown [Salmonella typhimurium]; E=0.056 COG: yfgL; COG1520 Uncharacterized proteins of WD40-like repeat family; E=6e-04; hypothetical protein 7008356 yfgL 1793019 yfgL Rhodopirellula baltica SH 1 hypothetical protein NP_870834.1 7007007 D 243090 CDS NP_870835.1 32477841 1793857 complement(7008357..7008560) 1 NC_005027.1 hypothetical protein 7008560 1793857 RB13051 Rhodopirellula baltica SH 1 hypothetical protein NP_870835.1 7008357 R 243090 CDS NP_870836.1 32477842 1790778 7008596..7009024 1 NC_005027.1 signal peptide 7009024 1790778 RB13053 Rhodopirellula baltica SH 1 signal peptide NP_870836.1 7008596 D 243090 CDS NP_870837.1 32477843 1790346 7009080..7009295 1 NC_005027.1 hypothetical protein 7009295 1790346 RB13056 Rhodopirellula baltica SH 1 hypothetical protein NP_870837.1 7009080 D 243090 CDS NP_870838.1 32477844 1792685 complement(7009155..7009412) 1 NC_005027.1 hypothetical protein 7009412 1792685 RB13057 Rhodopirellula baltica SH 1 hypothetical protein NP_870838.1 7009155 R 243090 CDS NP_870839.1 32477845 1794383 7009452..7009796 1 NC_005027.1 signal peptide 7009796 1794383 RB13059 Rhodopirellula baltica SH 1 signal peptide NP_870839.1 7009452 D 243090 CDS NP_870840.1 32477846 1792551 7009944..7010369 1 NC_005027.1 PMID: 11259647; signal peptide 7010369 1792551 RB13062 Rhodopirellula baltica SH 1 signal peptide NP_870840.1 7009944 D 243090 CDS NP_870841.1 32477847 1793009 7010406..7011494 1 NC_005027.1 hypothetical protein 7011494 1793009 RB13063 Rhodopirellula baltica SH 1 hypothetical protein NP_870841.1 7010406 D 243090 CDS NP_870842.1 32477848 1791233 7011573..7013345 1 NC_005027.1 hypothetical protein 7013345 1791233 RB13066 Rhodopirellula baltica SH 1 hypothetical protein NP_870842.1 7011573 D 243090 CDS NP_870843.1 32477849 1793868 7013342..7014841 1 NC_005027.1 best DB hits: PFAM: PF02271; Ubiquinol-cytochrome C reductase com; E=0.21; hypothetical protein 7014841 1793868 RB13068 Rhodopirellula baltica SH 1 hypothetical protein NP_870843.1 7013342 D 243090 CDS NP_870844.1 32477850 1790614 7014838..7016046 1 NC_005027.1 PMID: 9054507 best DB hits: BLAST: pir:F83108; hypothetical protein PA4303 [imported] - Pseudomonas; E=2e-12 embl:CAA06604.1; (AJ005576) MinD protein [Streptomyces griseus]; E=2e-10 embl:CAB92599.1; (AL356813) septum site-determining; E=4e-10 COG: DR0013; COG1192 ATPases involved in chromosome partitioning; E=2e-09 BH2436; COG0455 ATPases involved in chromosome partitioning; E=2e-07 HP0331; COG2894 Septum formation inhibitor-activating ATPase; E=4e-07 PFAM: PF00142; 4Fe-4S iron sulfur cluster bindin; E=0.27; chromosome partitioning ATPase 7016046 1790614 RB13071 Rhodopirellula baltica SH 1 chromosome partitioning ATPase NP_870844.1 7014838 D 243090 CDS NP_870845.1 32477851 1793960 7016043..7017452 1 NC_005027.1 PMID: 7934814 best DB hits: BLAST: gb:AAB36933.1; (U77780) secretory protein kinase [Chlorobium; E=2e-98 gb:AAF40195.1; AF229646_7 (AF229646) CpaF [Caulobacter crescentus]; E=2e-92 gb:AAG33866.1; AF317389_1 (AF317389) type IV NTPase; E=4e-86 COG: PA4302; COG0630 Predicted ATPases involved in pili and flagella; E=2e-78 PFAM: PF01580; FtsK/SpoIIIE family; E=0.13 PF01443; Viral (Superfamily 1) RNA hel; E=0.067 PF00437; Bacterial type II secretion s; E=2.4e-24; secretory protein 7017452 1793960 RB13073 Rhodopirellula baltica SH 1 secretory protein NP_870845.1 7016043 D 243090 CDS NP_870846.1 32477852 1793594 7017449..7018342 1 NC_005027.1 PMID: 11029439 best DB hits: BLAST: gb:AAF40196.1; AF229646_8 (AF229646) TadB [Caulobacter crescentus]; E=0.005 gb:AAD38173.2; AF152598_2 (AF152598) TadB [Actinobacillus; E=0.41; protein secretion system or pilus assembly related protein TadB 7018342 tadB 1793594 tadB Rhodopirellula baltica SH 1 protein secretion system or pilus assembly related protein TadB NP_870846.1 7017449 D 243090 CDS NP_870847.1 32477853 1792387 7018654..7019574 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB92604.1; (AL356813) integral membrane protein; E=0.002; hypothetical protein 7019574 1792387 RB13077 Rhodopirellula baltica SH 1 hypothetical protein NP_870847.1 7018654 D 243090 CDS NP_870848.1 32477854 1790371 7019481..7019936 1 NC_005027.1 PMID: 11298281 best DB hits: BLAST: gb:AAF81067.1; AF223364_2 (AF223364) unknown [Myxococcus xanthus]; E=8e-12 embl:CAB92612.1; (AL356813) secreted protein; E=6e-05 swissprot:Q9UZM5; Y743_PYRAB HYPOTHETICAL PROTEIN PAB0743 -----; E=0.006 COG: PAB0743; COG1430 Uncharacterized ACR; E=6e-04 PFAM: PF02643; Uncharacterized ACR, COG1430; E=4.1e-08; hypothetical protein 7019936 1790371 RB13078 Rhodopirellula baltica SH 1 hypothetical protein NP_870848.1 7019481 D 243090 CDS NP_870849.1 32477855 1792931 7019948..7020655 1 NC_005027.1 PMID: 8688087 best DB hits: BLAST: swissprot:Q58492; YA92_METJA HYPOTHETICAL PROTEIN MJ1092 -----; E=5e-07 swissprot:P76425; YOHM_ECOLI HYPOTHETICAL 30.4 KDA PROTEIN IN; E=0.003 gb:AAG57167.1; AE005437_2 (AE005437) orf, hypothetical protein; E=0.019 COG: MJ1092; COG2215 Predicted membrane protein; E=5e-08; hypothetical protein 7020655 1792931 RB13080 Rhodopirellula baltica SH 1 hypothetical protein NP_870849.1 7019948 D 243090 CDS NP_870850.1 32477856 1793758 7020677..7020898 1 NC_005027.1 hypothetical protein 7020898 1793758 RB13082 Rhodopirellula baltica SH 1 hypothetical protein NP_870850.1 7020677 D 243090 CDS NP_870851.1 32477857 1795237 7020834..7021373 1 NC_005027.1 PMID: 9537320 best DB hits: BLAST: pir:B70403; hypothetical protein aq_1194 - Aquifex aeolicus -----; E=3e-05 pir:G75360; conserved hypothetical protein - Deinococcus radiodurans; E=1e-04 pir:S74786; hypothetical protein slr1083 - Synechocystis sp. (strain; E=0.003; hypothetical protein 7021373 1795237 RB13084 Rhodopirellula baltica SH 1 hypothetical protein NP_870851.1 7020834 D 243090 CDS NP_870852.1 32477858 1791959 7021382..7021633 1 NC_005027.1 hypothetical protein 7021633 1791959 RB13086 Rhodopirellula baltica SH 1 hypothetical protein NP_870852.1 7021382 D 243090 CDS NP_870853.1 32477859 1790353 complement(7021677..7022309) 1 NC_005027.1 hypothetical protein 7022309 1790353 RB13088 Rhodopirellula baltica SH 1 hypothetical protein NP_870853.1 7021677 R 243090 CDS NP_870854.1 32477860 1790255 complement(7022309..7022530) 1 NC_005027.1 hypothetical protein 7022530 1790255 RB13089 Rhodopirellula baltica SH 1 hypothetical protein NP_870854.1 7022309 R 243090 CDS NP_870855.1 32477861 1790383 complement(7022518..7023642) 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB71851.1; (AL138667) monooxygenase. [Streptomyces; E=0.003 gb:AAB53030.1; (U62055) TrkA [Bacillus subtilis]; E=0.023 pir:E69725; potassium uptake trkA - Bacillus subtilis -----; E=0.023 COG: BS_trkA; COG2072 Predicted flavoprotein involved in K+ transport; E=0.002 PFAM: PF01134; Glucose inhibited division prot; E=0.5 PF02254; KTN NAD-binding domain; E=0.066 PF02032; Phytoene dehydrogenase related; E=0.88; monooxygenase 7023642 1790383 RB13090 Rhodopirellula baltica SH 1 monooxygenase NP_870855.1 7022518 R 243090 CDS NP_870856.1 32477862 1792120 complement(7023639..7024934) 1 NC_005027.1 PMID: 1655697 best DB hits: BLAST: pir:D82953; conserved hypothetical protein PA5535 [imported] -; E=1e-109 embl:CAC08207.1; (AJ278349) P44k protein [Rhodococcus sp. AJ270]; E=1e-101 pir:B69760; conserved hypothetical protein yciC - Bacillus subtilis; E=1e-98 COG: PA5535; COG0523 GTPases (G3E family); E=1e-110 PFAM: PF01443; Viral (Superfamily 1) RNA hel; E=0.08 PF01495; HypB/UreG nucleotide-binding; E=0.026 PF02492; Cobalamin synthesis protein/P; E=9.1e-107; cobalamin synthesis protein CobW 7024934 1792120 RB13091 Rhodopirellula baltica SH 1 cobalamin synthesis protein CobW NP_870856.1 7023639 R 243090 CDS NP_870857.1 32477863 1792678 7025003..7025143 1 NC_005027.1 hypothetical protein 7025143 1792678 RB13092 Rhodopirellula baltica SH 1 hypothetical protein NP_870857.1 7025003 D 243090 CDS NP_870858.1 32477864 1792271 complement(7025101..7025577) 1 NC_005027.1 signal peptide 7025577 1792271 RB13093 Rhodopirellula baltica SH 1 signal peptide NP_870858.1 7025101 R 243090 CDS NP_870859.1 32477865 1793976 7025749..7026762 1 NC_005027.1 PMID: 1655697 best DB hits: BLAST: swissprot:P33030; YEIR_ECOLI HYPOTHETICAL 36.1 KD PROTEIN IN; E=1e-47 gb:AAG57311.1; AE005450_1 (AE005450) orf, hypothetical protein; E=8e-47 ddbj:BAA15982.1; (D90849) ORF_ID:o369#5; similar to [SwissProt; E=1e-44 COG: yeiR; COG0523 GTPases (G3E family); E=1e-48 PFAM: PF01443; Viral (Superfamily 1) RNA hel; E=0.025 PF02492; Cobalamin synthesis protein/P; E=2.3e-13; cobalamin synthesis protein CobW 7026762 1793976 RB13094 Rhodopirellula baltica SH 1 cobalamin synthesis protein CobW NP_870859.1 7025749 D 243090 CDS NP_870860.1 32477866 1790864 7026753..7027442 1 NC_005027.1 hypothetical protein 7027442 1790864 RB13095 Rhodopirellula baltica SH 1 hypothetical protein NP_870860.1 7026753 D 243090 CDS NP_870861.1 32477867 1790671 complement(7026795..7027310) 1 NC_005027.1 signal peptide 7027310 1790671 RB13097 Rhodopirellula baltica SH 1 signal peptide NP_870861.1 7026795 R 243090 CDS NP_870862.1 32477868 1795150 complement(7027443..7027733) 1 NC_005027.1 hypothetical protein 7027733 1795150 RB13098 Rhodopirellula baltica SH 1 hypothetical protein NP_870862.1 7027443 R 243090 CDS NP_870863.1 32477869 1790159 7027807..7028238 1 NC_005027.1 PMID: 7798143 PMID: 2993806 PMID: 2823881 best DB hits: BLAST: swissprot:Q45765; FUR_BORPE FERRIC UPTAKE REGULATION PROTEIN; E=3e-05 swissprot:P06975; FUR_ECOLI FERRIC UPTAKE REGULATION PROTEIN; E=2e-04 gb:AAD01582.1; (AF016035) ferric uptake regulation protein; E=2e-04 COG: fur; COG0735 Fe2+/Zn2+ uptake regulation proteins; E=2e-05 PFAM: PF00403; Heavy-metal-associated domain; E=0.18 PF01475; Ferric uptake regulator family; E=7.4e-05; ferric uptake regulation protein Fur 7028238 fur 1790159 fur Rhodopirellula baltica SH 1 ferric uptake regulation protein Fur NP_870863.1 7027807 D 243090 CDS NP_870864.1 32477870 1790005 complement(7028321..7028581) 1 NC_005027.1 signal peptide 7028581 1790005 RB13102 Rhodopirellula baltica SH 1 signal peptide NP_870864.1 7028321 R 243090 CDS NP_870865.1 32477871 1791318 7028712..7030826 1 NC_005027.1 PMID: 8326859 best DB hits: BLAST: gb:AAG60826.1; AF322012_131 (AF322013) RhcC2 [Bradyrhizobium; E=2e-29 swissprot:P55702; Y4XJ_RHISN HYPOTHETICAL 44.3 KD PROTEIN Y4XJ; E=5e-29 pir:G83108; probable type II secretion system protein PA4304; E=2e-21 COG: PA4304; COG1450 General secretory pathway protein D; E=2e-22 PFAM: PF00263; Bacterial type II and III secretion; E=5.2e-06; type II secretion system protein 7030826 1791318 RB13104 Rhodopirellula baltica SH 1 type II secretion system protein NP_870865.1 7028712 D 243090 CDS NP_870866.1 32477872 1791386 7030816..7031394 1 NC_005027.1 signal peptide 7031394 1791386 RB13106 Rhodopirellula baltica SH 1 signal peptide NP_870866.1 7030816 D 243090 CDS NP_870867.1 32477873 1794272 7031391..7032119 1 NC_005027.1 PMID: 97128806 best DB hits: BLAST: gb:AAA62535.1; (U21320) contains TPR domain-like repeats; E=2e-04 gb:AAB63465.1; (U77412) O-linked GlcNAc transferase; E=2e-04 pir:H83171; type 4 fimbrial biogenesis protein PilF PA3805; E=4e-04 COG: PA3805; COG0457 TPR-repeat-containing proteins; E=4e-05; type IV fimbrial biogenesis protein PilF 7032119 pilF 1794272 pilF Rhodopirellula baltica SH 1 type IV fimbrial biogenesis protein PilF NP_870867.1 7031391 D 243090 CDS NP_870868.1 32477874 1793160 complement(7032215..7032463) 1 NC_005027.1 hypothetical protein 7032463 1793160 RB13109 Rhodopirellula baltica SH 1 hypothetical protein NP_870868.1 7032215 R 243090 CDS NP_870869.1 32477875 1793097 7032486..7033415 1 NC_005027.1 PMID: 3031429 best DB hits: BLAST: pir:C83259; hypothetical protein PA3087 [imported] - Pseudomonas; E=1e-54 ddbj:BAB06564.1; (AP001516) diadenosine tetraphosphatase; E=8e-10 embl:CAA11911.1; (AJ224354) protein serine-threonine phosphatase,; E=6e-08 COG: PA3087; COG0639 Diadenosine tetraphosphatase and related; E=1e-55; diadenosine tetraphosphatase 7033415 apaH 1793097 apaH Rhodopirellula baltica SH 1 diadenosine tetraphosphatase NP_870869.1 7032486 D 243090 CDS NP_870870.1 32477876 1793767 7033419..7033949 1 NC_005027.1 PMID: 11479323 best DB hits: BLAST: swissprot:Q46930; NUDH_ECOLI PROBABLE (DI)NUCLEOSIDE POLYPHOSPHATE; E=0.16; (di)nucleoside polyphosphate hydrolase 7033949 nudH 1793767 nudH Rhodopirellula baltica SH 1 (di)nucleoside polyphosphate hydrolase NP_870870.1 7033419 D 243090 CDS NP_870871.1 32477877 1794088 complement(7034035..7036128) 1 NC_005027.1 PMID: 7984107 best DB hits: BLAST: pir:S75136; sensory transduction histidine kinase slr2104 -; E=1e-69 pir:S75130; sensory transduction histidine kinase slr2098 -; E=4e-57 pir:C82424; sensor histidine kinase LuxQ VCA0736 [imported] - Vibrio; E=8e-56 COG: VC1349_2; COG0642 Sensory transduction histidine kinases; E=8e-57 PFAM: PF00785; PAC motif; E=0.34 PF00512; His Kinase A (phosphoacceptor) d; E=8.1e-23 PF02518; Histidine kinase-, DNA gyrase B-; E=3.6e-41; sensory transduction histidine kinase 7036128 1794088 RB13112 Rhodopirellula baltica SH 1 sensory transduction histidine kinase NP_870871.1 7034035 R 243090 CDS NP_870872.1 32477878 1793869 complement(7036271..7036468) 1 NC_005027.1 hypothetical protein 7036468 1793869 RB13114 Rhodopirellula baltica SH 1 hypothetical protein NP_870872.1 7036271 R 243090 CDS NP_870873.1 32477879 1791166 complement(7036369..7036614) 1 NC_005027.1 hypothetical protein 7036614 1791166 RB13115 Rhodopirellula baltica SH 1 hypothetical protein NP_870873.1 7036369 R 243090 CDS NP_870874.1 32477880 1793798 7036394..7036561 1 NC_005027.1 hypothetical protein 7036561 1793798 RB13116 Rhodopirellula baltica SH 1 hypothetical protein NP_870874.1 7036394 D 243090 CDS NP_870875.1 32477881 1792092 7036595..7037065 1 NC_005027.1 best DB hits: BLAST: ddbj:BAB10342.1; (AB016872) contains similarity to two-component; E=0.63; hypothetical protein 7037065 1792092 RB13117 Rhodopirellula baltica SH 1 hypothetical protein NP_870875.1 7036595 D 243090 CDS NP_870876.1 32477882 1790677 7037043..7037675 1 NC_005027.1 PMID: 2882477 best DB hits: BLAST: pir:H70558; hypothetical protein Rv1626 - Mycobacterium tuberculosis; E=3e-16 pir:T35758; probable response regulator - Streptomyces coelicolor; E=4e-15 pir:S52249; response regulator nasT - Azotobacter vinelandii -----; E=1e-12 COG: Rv1626; COG0784 CheY-like receiver domains; E=2e-17 glnG; COG2204 AAA superfamily ATPases with N-terminal receiver; E=3e-06 MTH447_1; COG0784 CheY-like receiver domains; E=2e-04 PFAM: PF00072; Response regulator receiver doma; E=0.0018; nitrogen regulation protein 7037675 ntrC 1790677 ntrC Rhodopirellula baltica SH 1 nitrogen regulation protein NP_870876.1 7037043 D 243090 CDS NP_870877.1 32477883 1790451 complement(7037744..7038451) 1 NC_005027.1 hypothetical protein 7038451 1790451 RB13120 Rhodopirellula baltica SH 1 hypothetical protein NP_870877.1 7037744 R 243090 CDS NP_870878.1 32477884 1794543 7038440..7038598 1 NC_005027.1 hypothetical protein 7038598 1794543 RB13122 Rhodopirellula baltica SH 1 hypothetical protein NP_870878.1 7038440 D 243090 CDS NP_870879.1 32477885 1792892 complement(7038708..7040645) 1 NC_005027.1 signal peptide 7040645 1792892 RB13124 Rhodopirellula baltica SH 1 signal peptide NP_870879.1 7038708 R 243090 CDS NP_870880.1 32477886 1793241 complement(7040642..7042150) 1 NC_005027.1 hypothetical protein 7042150 1793241 RB13126 Rhodopirellula baltica SH 1 hypothetical protein NP_870880.1 7040642 R 243090 CDS NP_870881.1 32477887 1792582 7040747..7041253 1 NC_005027.1 hypothetical protein 7041253 1792582 RB13127 Rhodopirellula baltica SH 1 hypothetical protein NP_870881.1 7040747 D 243090 CDS NP_870882.1 32477888 1789978 7041425..7041940 1 NC_005027.1 hypothetical protein 7041940 1789978 RB13128 Rhodopirellula baltica SH 1 hypothetical protein NP_870882.1 7041425 D 243090 CDS NP_870883.1 32477889 1790146 7042044..7042292 1 NC_005027.1 hypothetical protein 7042292 1790146 RB13129 Rhodopirellula baltica SH 1 hypothetical protein NP_870883.1 7042044 D 243090 CDS NP_870884.1 32477890 1795380 7042434..7044236 1 NC_005027.1 PMID: 9389475 best DB hits: BLAST: gb:AAB89309.1; (AE000969) cysteine proteinase, ; E=0.30 PFAM: PF01839; FG-GAP repeat; E=0.31; cysteine proteinase 7044236 1795380 RB13131 Rhodopirellula baltica SH 1 cysteine proteinase NP_870884.1 7042434 D 243090 CDS NP_870885.1 32477891 1793150 complement(7044398..7045837) 1 NC_005027.1 hypothetical protein 7045837 1793150 RB13132 Rhodopirellula baltica SH 1 hypothetical protein NP_870885.1 7044398 R 243090 CDS NP_870886.1 32477892 1792723 complement(7045937..7048405) 1 NC_005027.1 hypothetical protein 7048405 1792723 RB13137 Rhodopirellula baltica SH 1 hypothetical protein NP_870886.1 7045937 R 243090 CDS NP_870887.1 32477893 1791192 complement(7048625..7049875) 1 NC_005027.1 PMID: 8041620 best DB hits: BLAST: swissprot:P45043; XYLR_HAEIN XYLOSE OPERON REGULATORY PROTEIN; E=3e-40 swissprot:P37390; XYLR_ECOLI XYLOSE OPERON REGULATORY PROTEIN; E=4e-39 ddbj:BAB03212.1; (AB046360) xylose operon regulatory; E=1e-34 COG: HI1106_1; COG1609 Transcriptional regulators; E=4e-22 HI1106_2; COG2207 AraC-type DNA-binding domain-containing proteins; E=8e-12 PFAM: PF00165; Bacterial regulatory helix-turn-heli; E=2.8e-25; xylose operon regulatory protein 7049875 xylR 1791192 xylR Rhodopirellula baltica SH 1 xylose operon regulatory protein NP_870887.1 7048625 R 243090 CDS NP_870888.1 32477894 1792995 7049908..7050891 1 NC_005027.1 PMID: 1339433 best DB hits: BLAST: swissprot:P44979; YGBJ_HAEIN HYPOTHETICAL PROTEIN HI1010 -----; E=3e-48 gb:AAK03450.1; (AE006174) unknown [Pasteurella multocida]; E=8e-47 gb:AAF25989.1; AC013354_8 (AC013354) F15H18.21 [Arabidopsis; E=6e-46 COG: HI1010; COG2084 3-hydroxyisobutyrate dehydrogenase and related; E=3e-49 PFAM: PF01089; Delta 1-pyrroline-5-carboxylate; E=0.035 PF02737; 3-hydroxyacyl-CoA dehydrogenase,; E=0.00065 PF02254; KTN NAD-binding domain; E=8.4e-05; 3-hydroxyisobutyrate dehydrogenase 7050891 mmsB 1792995 mmsB Rhodopirellula baltica SH 1 3-hydroxyisobutyrate dehydrogenase NP_870888.1 7049908 D 243090 CDS NP_870889.1 32477895 1796963 complement(7050849..7051226) 1 NC_005027.1 hypothetical protein 7051226 1796963 RB13142 Rhodopirellula baltica SH 1 hypothetical protein NP_870889.1 7050849 R 243090 CDS NP_870890.1 32477896 1796983 complement(7051238..7052500) 1 NC_005027.1 hypothetical protein 7052500 1796983 RB13143 Rhodopirellula baltica SH 1 hypothetical protein NP_870890.1 7051238 R 243090 CDS NP_870891.1 32477897 1796964 complement(7052481..7053470) 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB61805.1; (AL133236) hypothetical protein SCE65.17c; E=5e-41 ddbj:BAB05597.1; (AP001513) BH1878~unknown conserved protein; E=0.003 gb:AAB97967.1; (AF040720) xylosidasearabinosidase [Selenomonas; E=0.010; xylosidase/arabinosidase 7053470 1796964 RB13146 Rhodopirellula baltica SH 1 xylosidase/arabinosidase NP_870891.1 7052481 R 243090 CDS NP_870892.1 32477898 1796758 complement(7053522..7054958) 1 NC_005027.1 PMID: 7910580 best DB hits: BLAST: embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=7e-62 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=7e-62 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=3e-61 COG: aslA; COG3119 Arylsulfatase A and related enzymes; E=5e-31 PFAM: PF00884; Sulfatase; E=1.2e-107; arylsulphatase A 7054958 1796758 RB13147 Rhodopirellula baltica SH 1 arylsulphatase A NP_870892.1 7053522 R 243090 CDS NP_870893.1 32477899 1796178 complement(7054968..7058006) 1 NC_005027.1 best DB hits: BLAST: embl:CAA36398.1; (X52150) arylsulphatase a [Homo sapiens]; E=1e-60 gb:AAB03341.1; (U62317) arylsulfatase A [Homo sapiens]; E=1e-60 pdb:1E2S; P Chain P, Crystal Structure Of An Arylsulfatase A; E=1e-59 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=8e-31 PFAM: PF00814; Glycoprotease; E=0.2 PF00884; Sulfatase; E=1.6e-93 PF00884; Sulfatase; E=4.5e-52; iduronate-sulfatase or arylsulfatase A 7058006 1796178 RB13148 Rhodopirellula baltica SH 1 iduronate-sulfatase or arylsulfatase A NP_870893.1 7054968 R 243090 CDS NP_870894.1 32477900 1796179 complement(7058003..7059586) 1 NC_005027.1 PMID: 8662838 best DB hits: BLAST: gb:AAB07813.1; (U40408) sialic-acid O-acetylesterase [Mus; E=2e-19 embl:CAA67214.1; (X98625) sialic acid-specific 9-O-acetylesterase; E=7e-19 gb:AAD55976.1; (AF156856) cytosolic sialic acid; E=9e-15; sialic-acid O-acetylesterase 7059586 1796179 RB13150 Rhodopirellula baltica SH 1 sialic-acid O-acetylesterase NP_870894.1 7058003 R 243090 CDS NP_870895.1 32477901 1796216 complement(7059549..7060442) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:B75555; probable lipaseesterase - Deinococcus radiodurans; E=8e-04 pir:T51415; Carboxylesterase-like protein - Arabidopsis thaliana; E=0.071 gb:AAF32448.1; (AC021640) hypothetical protein [Arabidopsis; E=0.17 PFAM: PF01738; Dienelactone hydrolase; E=3.9e-07; lipase/esterase 7060442 1796216 RB13154 Rhodopirellula baltica SH 1 lipase/esterase NP_870895.1 7059549 R 243090 CDS NP_870896.1 32477902 1796233 complement(7060505..7062007) 1 NC_005027.1 PMID: 8020961 best DB hits: BLAST: ddbj:BAA04535.1; (D17629) N-acetylgalactosamine 6-sulfate; E=2e-49 gb:AAF63858.1; (AF112242) N-acetylgalactosamine-6-sulfate; E=4e-49 pir:S07089; arylsulfatase (EC 3.1.6.1) - sea urchin (Lytechinus; E=5e-42 COG: ydeN; COG3119 Arylsulfatase A and related enzymes; E=7e-33 PFAM: PF00884; Sulfatase; E=6.3e-54; N-acetylgalactosamine 6-sulfate sulfatase (GALNS) 7062007 1796233 RB13155 Rhodopirellula baltica SH 1 N-acetylgalactosamine 6-sulfate sulfatase (GALNS) NP_870896.1 7060505 R 243090 CDS NP_870897.1 32477903 1795313 complement(7061904..7063085) 1 NC_005027.1 PMID: 10567266 best DB hits: BLAST: pir:H70731; probable esterase - Mycobacterium tuberculosis (strain; E=4e-10 embl:CAA04934.1; (AJ001695) esterase [Thermotoga maritima]; E=2e-09 pir:F72287; esterase - Thermotoga maritima (strain MSB8) -----; E=2e-09 COG: Rv2284; COG0657 Acetyl esterase; E=4e-11 slr0825; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; E=8e-08 DR0821_2; COG0657 Acetyl esterase; E=6e-07 PFAM: PF00036; EF hand; E=0.59; lipase/esterase 7063085 1795313 RB13156 Rhodopirellula baltica SH 1 lipase/esterase NP_870897.1 7061904 R 243090 CDS NP_870898.1 32477904 1793182 complement(7063121..7064665) 1 NC_005027.1 PMID: 9710560 PMID: 10809675 best DB hits: BLAST: gb:AAF72520.1; AF248951_1 (AF248951) mucin-desulfating sulfatase; E=6e-35 gb:AAF55296.1; (AE003712) Sulf1 gene product [Drosophila; E=2e-28 pir:T16584; hypothetical protein K09C4.8 - Caenorhabditis elegans; E=3e-24 COG: yidJ; COG3119 Arylsulfatase A and related enzymes; E=1e-24 BS_yqgS; COG1368 Phosphoglycerol transferase and related proteins,; E=0.007 PFAM: PF02455; Hexon-associated protein (IIIa); E=0.25 PF00884; Sulfatase; E=8e-47; mucin-desulfating sulfatase 7064665 1793182 RB13157 Rhodopirellula baltica SH 1 mucin-desulfating sulfatase NP_870898.1 7063121 R 243090 CDS NP_870899.1 32477905 1796249 complement(7064662..7067217) 1 NC_005027.1 PMID: 8843436 best DB hits: BLAST: embl:CAB56147.1; (AL117669) hypothetical protein [Streptomyces; E=7e-12 embl:CAB55704.1; (AL117387) secreted protein; E=4e-09 embl:CAB94651.1; (AL359215) polysaccharide lyase.; E=1e-04; thiol (cysteine) protease 7067217 1796249 RB13162 Rhodopirellula baltica SH 1 thiol (cysteine) protease NP_870899.1 7064662 R 243090 CDS NP_870900.1 32477906 1796276 7067089..7068300 1 NC_005027.1 PMID: 8041620 best DB hits: BLAST: swissprot:P45043; XYLR_HAEIN XYLOSE OPERON REGULATORY PROTEIN; E=5e-38 swissprot:P37390; XYLR_ECOLI XYLOSE OPERON REGULATORY PROTEIN; E=8e-38 ddbj:BAB03212.1; (AB046360) xylose operon regulatory; E=2e-28 COG: HI1106_1; COG1609 Transcriptional regulators; E=1e-23 xylR_2; COG2207 AraC-type DNA-binding domain-containing proteins; E=4e-12 BH3692; COG1609 Transcriptional regulators; E=2e-05 PFAM: PF00165; Bacterial regulatory helix-turn-hel; E=3.1e-16; xylose operon regulatory protein 7068300 xylR 1796276 xylR Rhodopirellula baltica SH 1 xylose operon regulatory protein NP_870900.1 7067089 D 243090 CDS NP_870901.1 32477907 1796311 7068345..7068590 1 NC_005027.1 signal peptide 7068590 1796311 RB13168 Rhodopirellula baltica SH 1 signal peptide NP_870901.1 7068345 D 243090 CDS NP_870902.1 32477908 1796266 complement(7068587..7069753) 1 NC_005027.1 hypothetical protein 7069753 1796266 RB13170 Rhodopirellula baltica SH 1 hypothetical protein NP_870902.1 7068587 R 243090 CDS NP_870903.1 32477909 1796113 complement(7069775..7069906) 1 NC_005027.1 hypothetical protein 7069906 1796113 RB13171 Rhodopirellula baltica SH 1 hypothetical protein NP_870903.1 7069775 R 243090 CDS NP_870904.1 32477910 1795835 complement(7069962..7070198) 1 NC_005027.1 hypothetical protein 7070198 1795835 RB13172 Rhodopirellula baltica SH 1 hypothetical protein NP_870904.1 7069962 R 243090 CDS NP_870905.1 32477911 1796756 7070226..7070609 1 NC_005027.1 hypothetical protein 7070609 1796756 RB13173 Rhodopirellula baltica SH 1 hypothetical protein NP_870905.1 7070226 D 243090 CDS NP_870906.1 32477912 1796102 7070719..7074087 1 NC_005027.1 PMID: 2201868 best DB hits: BLAST: pir:S75136; sensory transduction histidine kinase slr2104 -; E=2e-67 pir:S75142; sensory transduction histidine kinase slr1759 -; E=2e-55 embl:CAA65047.1; (X95731) sensor kinase [Synechocystis; E=3e-55 COG: VC1349_2; COG0642 Sensory transduction histidine kinases; E=1e-50 PFAM: PF00989; PAS domain; E=0.011 PF00785; PAC motif; E=0.075 PF00989; PAS domain; E=0.46; sensory transduction histidine kinase 7074087 1796102 RB13175 Rhodopirellula baltica SH 1 sensory transduction histidine kinase NP_870906.1 7070719 D 243090 CDS NP_870907.1 32477913 1796782 7074068..7075603 1 NC_005027.1 PMID: 8905231 best DB hits: BLAST: pir:S76478; hypothetical protein - Synechocystis sp. (strain PCC; E=3e-41 pir:T44269; hypothetical protein KaiC [imported] - Synechococcus sp.; E=4e-39 pir:S76850; hypothetical protein - Synechocystis sp. (strain PCC; E=5e-35 COG: slr1942; COG0467 RecA-superfamily ATPases implicated in signal; E=3e-42 PFAM: PF00004; ATPase associated with; E=0.17 PF02223; Thymidylate kinase; E=0.11 PF00004; ATPase associated with; E=0.25; hypothetical protein 7075603 1796782 RB13180 Rhodopirellula baltica SH 1 hypothetical protein NP_870907.1 7074068 D 243090 CDS NP_870908.1 32477914 1796773 7075603..7078464 1 NC_005027.1 PMID: 2201868 best DB hits: BLAST: pir:S75136; sensory transduction histidine kinase slr2104 -; E=8e-57 pir:E82198; sensor histidine kinaseresponse regulator VC1445; E=4e-49 embl:CAA37397.1; (X53315) arcB [Escherichia coli]; E=3e-48 COG: sll1353_2; COG0642 Sensory transduction histidine kinases; E=7e-43 PFAM: PF00785; PAC motif; E=0.1 PF00989; PAS domain; E=8.8e-05 PF00785; PAC motif; E=9.8e-08; sensory transduction histidine kinase 7078464 1796773 RB13181 Rhodopirellula baltica SH 1 sensory transduction histidine kinase NP_870908.1 7075603 D 243090 CDS NP_870909.1 32477915 1796775 7078476..7078718 1 NC_005027.1 hypothetical protein 7078718 1796775 RB13183 Rhodopirellula baltica SH 1 hypothetical protein NP_870909.1 7078476 D 243090 CDS NP_870910.1 32477916 1796777 complement(7078691..7079314) 1 NC_005027.1 PMID: 7623667 best DB hits: BLAST: pir:E83039; thiol:disulfide interchange protein DipZ PA4845; E=1e-06 pir:F81074; thiol-disulfide interchange protein dsbD homolog NMB1519; E=2e-05 pir:B81868; thiol-disulfide interchange protein dsbD homolog NMA1719; E=2e-05 COG: PA4845; COG0526 Thiol-disulfide isomerase and thioredoxins; E=1e-07 VNG1905C; COG1331 Highly conserved protein containing a thioredoxin; E=5e-06 MTH1745; COG0526 Thiol-disulfide isomerase and thioredoxins; E=6e-06 PFAM: PF00085; Thioredoxin; E=0.1; thiol:disulfide interchange protein 7079314 dsbD 1796777 dsbD Rhodopirellula baltica SH 1 thiol:disulfide interchange protein NP_870910.1 7078691 R 243090 CDS NP_870911.1 32477917 1796780 7079332..7079589 1 NC_005027.1 hypothetical protein 7079589 1796780 RB13185 Rhodopirellula baltica SH 1 hypothetical protein NP_870911.1 7079332 D 243090 CDS NP_870912.1 32477918 1796779 complement(7079642..7081960) 1 NC_005027.1 PMID: 11544236 best DB hits: BLAST: gb:AAK02042.1; AF261825_11 (AF261825) hypothetical protein; E=1e-119 swissprot:P55381; Y4BN_RHISN HYPOTHETICAL 47.6 KD PROTEIN Y4BN; E=0.011 swissprot:P28842; SUBT_BACS9 SUBTILISIN PRECURSOR ----- pir:; E=0.14; subtilisin proteinase-like protein 7081960 1796779 RB13186 Rhodopirellula baltica SH 1 subtilisin proteinase-like protein NP_870912.1 7079642 R 243090 CDS NP_870913.1 32477919 1796769 7081765..7083066 1 NC_005027.1 PMID: 9043130 best DB hits: BLAST: gb:AAD45539.1; U70376_1 (U70376) InsA [Streptomyces netropsis]; E=5e-33 gb:AAG60893.1; AF322013_12 (AF322013) ID460 [Bradyrhizobium; E=8e-33 ddbj:BAA19966.1; (D63923) transposase [Acetobacter pasteurianus]; E=1e-26; transposase 7083066 1796769 RB13189 Rhodopirellula baltica SH 1 transposase NP_870913.1 7081765 D 243090 CDS NP_870914.1 32477920 1796783 7083077..7083229 1 NC_005027.1 hypothetical protein 7083229 1796783 RB13190 Rhodopirellula baltica SH 1 hypothetical protein NP_870914.1 7083077 D 243090 CDS NP_870915.1 32477921 1796781 complement(7083226..7083663) 1 NC_005027.1 hypothetical protein 7083663 1796781 RB13191 Rhodopirellula baltica SH 1 hypothetical protein NP_870915.1 7083226 R 243090 CDS NP_870916.1 32477922 1793667 complement(7083676..7084662) 1 NC_005027.1 PMID: 9927482 best DB hits: BLAST: gb:AAK02043.1; AF261825_12 (AF261825) ATPase [Salmonella; E=1e-73 swissprot:P55530; Y4KL_RHISN HYPOTHETICAL 37.6 KD AAA-FAMILY; E=4e-40 gb:AAA64864.1; (U23723) orf300 [Escherichia coli]; E=2e-25 COG: AF0477; COG0464 ATPases of the AAA+ class; E=1e-22 AF1285; COG1223 Predicted ATPases of the AAA+ class; E=9e-20 HP1069; COG0465 ATP-dependent Zn proteases; E=8e-19 PFAM: PF00406; Adenylate kinase; E=0.57 PF00071; Ras family; E=0.09 PF01202; Shikimate kinase; E=0.028; ATPase AAA 7084662 1793667 RB13193 Rhodopirellula baltica SH 1 ATPase AAA NP_870916.1 7083676 R 243090 CDS NP_870917.1 32477923 1796770 7084723..7084920 1 NC_005027.1 hypothetical protein 7084920 1796770 RB13194 Rhodopirellula baltica SH 1 hypothetical protein NP_870917.1 7084723 D 243090 CDS NP_870918.1 32477924 1791767 7084995..7085369 1 NC_005027.1 hypothetical protein 7085369 1791767 RB13198 Rhodopirellula baltica SH 1 hypothetical protein NP_870918.1 7084995 D 243090 CDS NP_870919.1 32477925 1793991 complement(7085419..7085784) 1 NC_005027.1 hypothetical protein 7085784 1793991 RB13201 Rhodopirellula baltica SH 1 hypothetical protein NP_870919.1 7085419 R 243090 CDS NP_870920.1 32477926 1794760 complement(7086052..7086189) 1 NC_005027.1 hypothetical protein 7086189 1794760 RB13202 Rhodopirellula baltica SH 1 hypothetical protein NP_870920.1 7086052 R 243090 CDS NP_870921.1 32477927 1792745 complement(7086337..7086564) 1 NC_005027.1 hypothetical protein 7086564 1792745 RB13205 Rhodopirellula baltica SH 1 hypothetical protein NP_870921.1 7086337 R 243090 CDS NP_870922.1 32477928 1790721 complement(7086585..7086761) 1 NC_005027.1 signal peptide 7086761 1790721 RB13207 Rhodopirellula baltica SH 1 signal peptide NP_870922.1 7086585 R 243090 CDS NP_870923.1 32477929 1793613 complement(7087064..7087501) 1 NC_005027.1 best DB hits: BLAST: swissprot:P29939; YCB6_PSEDE HYPOTHETICAL 15.0 KD PROTEIN IN COBO; E=4e-15 pir:H81035; conserved hypothetical protein NMB1840 [imported] -; E=7e-14 pir:D81981; probable integral membrane protein NMA0616 [imported] -; E=2e-13 COG: NMB1840; COG2510 Predicted membrane protein; E=7e-15 PFAM: PF00892; Integral membrane protein DUF6; E=5.4e-17; transmembrane protein- transporter 7087501 1793613 RB13209 Rhodopirellula baltica SH 1 transmembrane protein- transporter NP_870923.1 7087064 R 243090 CDS NP_870924.1 32477930 1792646 complement(7087573..7087710) 1 NC_005027.1 hypothetical protein 7087710 1792646 RB13210 Rhodopirellula baltica SH 1 hypothetical protein NP_870924.1 7087573 R 243090 CDS NP_870925.1 32477931 1795281 complement(7087707..7090199) 1 NC_005027.1 best DB hits: BLAST: pir:S77201; hypothetical protein slr1820 - Synechocystis sp. (strain; E=7e-27 gb:AAG57388.1; AE005458_5 (AE005458) orf, hypothetical protein; E=3e-26 pir:G64996; hypothetical protein b2257 - Escherichia coli (strain; E=3e-26 COG: slr1820; COG1807 Uncharacterized protein, affecting LPS biosynthesis; E=7e-28 aq_1899; COG0463 Glycosyltransferases involved in cell wall; E=8e-27 PA3556; COG1807 Uncharacterized protein, affecting LPS biosynthesis; E=1e-22 PFAM: PF00535; Glycosyl transferase; E=7.2e-32 PF02366; Dolichyl-phosphate-mannose-pr; E=1e-13; dolichol-phosphate mannosyltransferase- membrane bound sugar transferase involved in LPS biosynthesis 7090199 1795281 RB13211 Rhodopirellula baltica SH 1 dolichol-phosphate mannosyltransferase- membrane bound sugar transferase involved in LPS biosynthesis NP_870925.1 7087707 R 243090 CDS NP_870926.1 32477932 1794066 7090176..7090286 1 NC_005027.1 hypothetical protein 7090286 1794066 RB13214 Rhodopirellula baltica SH 1 hypothetical protein NP_870926.1 7090176 D 243090 CDS NP_870927.1 32477933 1791178 complement(7090395..7091498) 1 NC_005027.1 hypothetical protein 7091498 1791178 RB13215 Rhodopirellula baltica SH 1 hypothetical protein NP_870927.1 7090395 R 243090 CDS NP_870928.1 32477934 1791182 complement(7091498..7091881) 1 NC_005027.1 PMID: 1444307 best DB hits: BLAST: embl:CAC16667.1; (AJ302698) beta-lactamase repressor; E=2e-06 swissprot:P18415; BLAI_STAAU PENICILLINASE REPRESSOR (REGULATORY; E=7e-06 swissprot:P06555; BLAI_BACLI PENICILLINASE REPRESSOR (REGULATORY; E=8e-06; beta-lactamase repressor 7091881 1791182 RB13217 Rhodopirellula baltica SH 1 beta-lactamase repressor NP_870928.1 7091498 R 243090 CDS NP_870929.1 32477935 1790797 complement(7091973..7092785) 1 NC_005027.1 signal peptide 7092785 1790797 RB13220 Rhodopirellula baltica SH 1 signal peptide NP_870929.1 7091973 R 243090 CDS NP_870930.1 32477936 1792255 7093018..7093986 1 NC_005027.1 best DB hits: PFAM: PF01569; PAP2 superfamily; E=0.00049; signal peptide 7093986 1792255 RB13221 Rhodopirellula baltica SH 1 signal peptide NP_870930.1 7093018 D 243090 CDS NP_870931.1 32477937 1793183 complement(7094088..7094714) 1 NC_005027.1 best DB hits: BLAST: pir:B69020; hypothetical protein MTH115 - Methanobacterium; E=8e-16 ddbj:BAA96146.1; (AP002092) ESTs; E=4e-10 gb:AAD32774.1; AC007661_11 (AC007661) unknown protein [Arabidopsis; E=9e-09; hypothetical protein 7094714 1793183 RB13222 Rhodopirellula baltica SH 1 hypothetical protein NP_870931.1 7094088 R 243090 CDS NP_870932.1 32477938 1793184 complement(7094813..7096270) 1 NC_005027.1 best DB hits: BLAST: pir:T36454; probable oxidoreductase - Streptomyces coelicolor; E=1e-110 pir:T51117; hypothetical protein [imported] - Brevibacterium linens; E=4e-66 gb:AAG55251.1; AE005268_4 (AE005268) dTDP-glucose enzyme; E=2e-55 COG: VC1632; COG0702 Predicted nucleoside-diphosphate-sugar epimerases; E=2e-56 PH0378; COG0451 Nucleoside-diphosphate-sugar epimerases; E=4e-05 slr0317; COG0702 Predicted nucleoside-diphosphate-sugar epimerases; E=8e-05 PFAM: PF02716; Isoflavone reductase; E=0.16 PF01118; Semialdehyde dehydrogenase, N; E=0.012 PF01370; NAD dependent epimerase/dehyd; E=0.043; oxidoreductase- NAD-dependent nucleoside-diphosphate-sugar epimerase 7096270 1793184 RB13224 Rhodopirellula baltica SH 1 oxidoreductase- NAD-dependent nucleoside-diphosphate-sugar epimerase NP_870932.1 7094813 R 243090 CDS NP_870933.1 32477939 1792465 7096300..7097982 1 NC_005027.1 PMID: 3027506 PMID: 2164680 best DB hits: BLAST: pir:E82351; ATP-dependent DNA helicase RecQ VC0196 [imported] -; E=1e-68 swissprot:P50729; RECQ_BACSU ATP-DEPENDENT DNA HELICASE RECQ; E=4e-65 gb:AAA24517.1; (M30198) recQ [Escherichia coli]; E=7e-65 COG: VC0196; COG0514 Superfamily II DNA helicase; E=1e-69 YNL112w; COG0513 Superfamily II DNA and RNA helicases; E=3e-13 PFAM: PF00270; DEAD/DEAH box helicase; E=1.2e-39 PF00271; Helicase conserved C-terminal doma; E=2e-23; ATP-dependent DNA helicase RecQ 7097982 recQ 1792465 recQ Rhodopirellula baltica SH 1 ATP-dependent DNA helicase RecQ NP_870933.1 7096300 D 243090 CDS NP_870934.1 32477940 1792590 7097952..7098302 1 NC_005027.1 hypothetical protein 7098302 1792590 RB13228 Rhodopirellula baltica SH 1 hypothetical protein NP_870934.1 7097952 D 243090 CDS NP_870935.1 32477941 1790354 7098284..7098475 1 NC_005027.1 hypothetical protein 7098475 1790354 RB13230 Rhodopirellula baltica SH 1 hypothetical protein NP_870935.1 7098284 D 243090 CDS NP_870936.1 32477942 1790436 7098472..7099530 1 NC_005027.1 best DB hits: BLAST: embl:CAA72209.1; (Y11405) replicase-associated protein; E=0.65 embl:CAB44020.1; (AJ132180) Rep protein [faba bean necrotic; E=0.65 ddbj:BAA97561.1; (AB027511) replication initiator protein [milk; E=0.79; hypothetical protein 7099530 1790436 RB13231 Rhodopirellula baltica SH 1 hypothetical protein NP_870936.1 7098472 D 243090 CDS NP_870937.1 32477943 1792295 complement(7099626..7099841) 1 NC_005027.1 hypothetical protein 7099841 1792295 RB13234 Rhodopirellula baltica SH 1 hypothetical protein NP_870937.1 7099626 R 243090 CDS NP_870938.1 32477944 1795394 7099815..7100237 1 NC_005027.1 hypothetical protein 7100237 1795394 RB13235 Rhodopirellula baltica SH 1 hypothetical protein NP_870938.1 7099815 D 243090 CDS NP_870939.1 32477945 1795347 7100241..7101407 1 NC_005027.1 best DB hits: BLAST: pir:E82493; conserved hypothetical protein VCA0172 [imported] -; E=3e-04 pir:B83262; hypothetical protein PA3073 [imported] - Pseudomonas; E=0.003 pir:T32949; hypothetical protein C05G6.3 - Caenorhabditis elegans; E=0.51 COG: VCA0172; COG3035 Uncharacterized BCR; E=3e-05 PFAM: PF00092; von Willebrand factor type A domain; E=2.6e-08; hypothetical protein 7101407 1795347 RB13237 Rhodopirellula baltica SH 1 hypothetical protein NP_870939.1 7100241 D 243090 CDS NP_870940.1 32477946 1793768 7101410..7101904 1 NC_005027.1 PMID: 9573173; hypothetical protein 7101904 1793768 RB13238 Rhodopirellula baltica SH 1 hypothetical protein NP_870940.1 7101410 D 243090 CDS NP_870941.1 32477947 1793705 complement(7101981..7102571) 1 NC_005027.1 hypothetical protein 7102571 1793705 RB13239 Rhodopirellula baltica SH 1 hypothetical protein NP_870941.1 7101981 R 243090 CDS NP_870942.1 32477948 1792771 complement(7102561..7103064) 1 NC_005027.1 best DB hits: BLAST: embl:CAC01348.1; (AL390975) ECF-subfamily sigma factor; E=2e-06 pir:H70507; probable sigE protein - Mycobacterium tuberculosis; E=7e-06 gb:AAC45221.1; (U87307) extracytoplasmic function alternative; E=7e-06 COG: Rv1221; COG1595 DNA-directed RNA polymerase specialized sigma; E=7e-07 PFAM: PF00776; Sigma-70 factor (ECF subfamily); E=1e-09; ECF family RNA polymerase sigma factor 7103064 1792771 RB13241 Rhodopirellula baltica SH 1 ECF family RNA polymerase sigma factor NP_870942.1 7102561 R 243090 CDS NP_870943.1 32477949 1792887 complement(7103061..7103330) 1 NC_005027.1 hypothetical protein 7103330 1792887 RB13244 Rhodopirellula baltica SH 1 hypothetical protein NP_870943.1 7103061 R 243090 CDS NP_870944.1 32477950 1794211 complement(7103413..7103583) 1 NC_005027.1 hypothetical protein 7103583 1794211 RB13245 Rhodopirellula baltica SH 1 hypothetical protein NP_870944.1 7103413 R 243090 CDS NP_870945.1 32477951 1793672 complement(7103620..7104177) 1 NC_005027.1 hypothetical protein 7104177 1793672 RB13247 Rhodopirellula baltica SH 1 hypothetical protein NP_870945.1 7103620 R 243090 CDS NP_870946.1 32477952 1790118 complement(7104107..7104463) 1 NC_005027.1 hypothetical protein 7104463 1790118 RB13250 Rhodopirellula baltica SH 1 hypothetical protein NP_870946.1 7104107 R 243090 CDS NP_870947.1 32477953 1791712 7104552..7104746 1 NC_005027.1 hypothetical protein 7104746 1791712 RB13251 Rhodopirellula baltica SH 1 hypothetical protein NP_870947.1 7104552 D 243090 CDS NP_870948.1 32477954 1792547 7104865..7105479 1 NC_005027.1 best DB hits: BLAST: embl:CAB69777.1; (AL137187) tetR-family transcriptional; E=3e-10 gb:AAD54003.1; AF088856_2 (AF088856) hypothetical protein; E=3e-07 embl:CAB95981.1; (AL360034) tetR-family regulatory; E=4e-07 COG: PA2931; COG1309 Transcriptional regulator; E=1e-05 PFAM: PF00440; Bacterial regulatory proteins, tetR; E=0.63; TetR family transcriptional regulator 7105479 1792547 RB13253 Rhodopirellula baltica SH 1 TetR family transcriptional regulator NP_870948.1 7104865 D 243090 CDS NP_870949.1 32477955 1793333 7105590..7106450 1 NC_005027.1 best DB hits: BLAST: embl:CAB59583.1; (AL132662) possible oxidoreductase [Streptomyces; E=3e-23 swissprot:Q50600; YJ33_MYCTU HYPOTHETICAL 32.2 KDA PROTEIN RV1833C; E=1e-22 gb:AAD02150.1; (AF039534) hydroxymuconic semialdehyde hydrolase; E=2e-19 COG: Rv1833c; COG0596 Predicted hydrolases or acyltransferases; E=1e-23 BH2279; COG0596 Predicted hydrolases or acyltransferases (alpha/beta; E=1e-18 BS_yugF; COG0596 Predicted hydrolases or acyltransferases; E=2e-18 PFAM: PF00561; alpha/beta hydrolase fold; E=4.1e-35; oxidoreductase- hydrolase involved in aromatic ring cleavage 7106450 1793333 RB13257 Rhodopirellula baltica SH 1 oxidoreductase- hydrolase involved in aromatic ring cleavage NP_870949.1 7105590 D 243090 CDS NP_870950.1 32477956 1794940 complement(7106461..7108365) 1 NC_005027.1 best DB hits: BLAST: pir:A72314; hypothetical protein TM0950 - Thermotoga maritima; E=3e-16; hypothetical protein 7108365 1794940 RB13259 Rhodopirellula baltica SH 1 hypothetical protein NP_870950.1 7106461 R 243090 CDS NP_870951.1 32477957 1792769 7108384..7109364 1 NC_005027.1 best DB hits: BLAST: swissprot:P26646; YHDH_ECOLI PROTEIN YHDH ----- pir: JS0688; E=4e-86 gb:AAG58380.1; AE005553_2 (AE005553) dehydrogenase; E=5e-86 pir:D82374; zinc-binding alcohol dehydrogenase VC0026 [imported] -; E=1e-76 COG: yhdH; COG0604 NADPH:quinone reductase and related Zn-dependent; E=4e-87 BH0538; COG1064 Zn-dependent alcohol dehydrogenases; E=0.001 PA0863; COG0604 NADPH:quinone reductase and related Zn-dependent; E=0.003 PFAM: PF00107; Zinc-binding dehydrogenases; E=2.3e-38; zinc-binding alcohol dehydrogenase 7109364 yhdH 1792769 yhdH Rhodopirellula baltica SH 1 zinc-binding alcohol dehydrogenase NP_870951.1 7108384 D 243090 CDS NP_870952.1 32477958 1794652 complement(7109512..7110501) 1 NC_005027.1 PMID: 3015933 PMID: 2201777 best DB hits: BLAST: pir:E75366; glutamyl-tRNA synthetase-related protein - Deinococcus; E=2e-41 swissprot:O67271; SYE_AQUAE GLUTAMYL-TRNA SYNTHETASE; E=2e-39 gb:AAF49463.1; (AE003527) CG4573 gene product [Drosophila; E=2e-37 COG: DR1687; COG0008 Glutamyl- and glutaminyl-tRNA synthetases; E=2e-42 PFAM: PF00749; tRNA synthetases class I (E and; E=2.4e-11; glutamyl-tRNA synthetase-related protein 7110501 1794652 RB13261 Rhodopirellula baltica SH 1 glutamyl-tRNA synthetase-related protein NP_870952.1 7109512 R 243090 CDS NP_870953.2 161579024 1790442 complement(7110498..7111886) 1 NC_005027.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 7111886 asnC 1790442 asnC Rhodopirellula baltica SH 1 asparaginyl-tRNA synthetase NP_870953.2 7110498 R 243090 CDS NP_870954.1 32477960 1792396 7112044..7114059 1 NC_005027.1 PMID: 7751300 best DB hits: BLAST: swissprot:Q55404; ACSA_SYNY3 ACETYL-COENZYME A SYNTHETASE; E=0.0 pir:D75270; acetyl-CoA synthase - Deinococcus radiodurans (strain; E=0.0 swissprot:P27550; ACSA_ECOLI ACETYL-COENZYME A SYNTHETASE; E=0.0 COG: sll0542; COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid; E=0.0 DR2471; COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases; E=0.0 AF2389-N; COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid; E=1e-172 PFAM: PF00501; AMP-binding enzyme; E=3.1e-126; acetyl-coenzyme A synthetase 7114059 acs 1792396 acs Rhodopirellula baltica SH 1 acetyl-coenzyme A synthetase NP_870954.1 7112044 D 243090 CDS NP_870955.1 32477961 1792388 7114095..7116446 1 NC_005027.1 best DB hits: BLAST: swissprot:P71584; PKNB_MYCTU SERINETHREONINE-PROTEIN; E=3e-40 pir:H69878; probable protein kinase (EC 2.7.1.-) yloP - Bacillus; E=9e-38 swissprot:P54744; PKNB_MYCLE SERINETHREONINE-PROTEIN; E=2e-37 COG: Rv0014c_1; COG0515 Serine/threonine protein kinases; E=3e-41 PFAM: PF00069; Protein kinase domain; E=2e-47; serine/threonine-protein kinase pknB 7116446 pknB 1792388 pknB Rhodopirellula baltica SH 1 serine/threonine-protein kinase pknB NP_870955.1 7114095 D 243090 CDS NP_870956.1 32477962 1793551 complement(7116578..7117297) 1 NC_005027.1 hypothetical protein 7117297 1793551 RB13267 Rhodopirellula baltica SH 1 hypothetical protein NP_870956.1 7116578 R 243090 CDS NP_870957.1 32477963 1789921 complement(7117533..7118558) 1 NC_005027.1 PMID: 8125347 best DB hits: BLAST: swissprot:P55650; Y4SG_RHISN HYPOTHETICAL 37.0 KD PROTEIN Y4SG; E=1e-17 swissprot:O66806; DDL_AQUAE D-ALANINE--D-ALANINE LIGASE; E=1e-10 swissprot:P44405; DDL_HAEIN D-ALANINE--D-ALANINE LIGASE; E=3e-10 COG: aq_521; COG1181 D-alanine-D-alanine ligase and related ATP-grasp; E=1e-11 PFAM: PF01820; D-ala D-ala ligase; E=7.8e-06; D-alanine-D-alanine ligase 7118558 ddlA 1789921 ddlA Rhodopirellula baltica SH 1 D-alanine-D-alanine ligase NP_870957.1 7117533 R 243090 CDS NP_870958.1 32477964 1795001 complement(7118616..7119677) 1 NC_005027.1 hypothetical protein 7119677 1795001 RB13273 Rhodopirellula baltica SH 1 hypothetical protein NP_870958.1 7118616 R 243090 CDS NP_870959.1 32477965 1793619 complement(7119809..7120528) 1 NC_005027.1 hypothetical protein 7120528 1793619 RB13278 Rhodopirellula baltica SH 1 hypothetical protein NP_870959.1 7119809 R 243090 CDS NP_870960.1 32477966 1794087 complement(7120587..7122128) 1 NC_005027.1 signal peptide 7122128 1794087 RB13281 Rhodopirellula baltica SH 1 signal peptide NP_870960.1 7120587 R 243090 CDS NP_870961.1 32477967 1794995 complement(7122041..7122232) 1 NC_005027.1 hypothetical protein 7122232 1794995 RB13283 Rhodopirellula baltica SH 1 hypothetical protein NP_870961.1 7122041 R 243090 CDS NP_870962.1 32477968 1792642 7122359..7123975 1 NC_005027.1 hypothetical protein 7123975 1792642 RB13286 Rhodopirellula baltica SH 1 hypothetical protein NP_870962.1 7122359 D 243090 CDS NP_870963.1 32477969 1792713 7123968..7124615 1 NC_005027.1 hypothetical protein 7124615 1792713 RB13290 Rhodopirellula baltica SH 1 hypothetical protein NP_870963.1 7123968 D 243090 CDS NP_870964.1 32477970 1793750 7124664..7127132 1 NC_005027.1 PMID: 8326859 best DB hits: BLAST: pir:S32858; outD protein - Erwinia carotovora ----- embl:; E=2e-25 swissprot:P31701; GSPD_ERWCA GENERAL SECRETION PATHWAY PROTEIN D; E=2e-25 gb:AAA58785.1; (L33796) EpsD [Vibrio cholerae]; E=1e-22 COG: hofQ; COG1450 General secretory pathway protein D; E=4e-23 PFAM: PF00263; Bacterial type II and III secretion; E=1e-45; general secretion pathway protein D 7127132 outD 1793750 outD Rhodopirellula baltica SH 1 general secretion pathway protein D NP_870964.1 7124664 D 243090 CDS NP_870965.1 32477971 1795310 7127129..7127677 1 NC_005027.1 hypothetical protein 7127677 1795310 RB13294 Rhodopirellula baltica SH 1 hypothetical protein NP_870965.1 7127129 D 243090 CDS NP_870966.1 32477972 1792763 7128034..7128630 1 NC_005027.1 signal peptide 7128630 1792763 RB13297 Rhodopirellula baltica SH 1 signal peptide NP_870966.1 7128034 D 243090 CDS NP_870967.1 32477973 1793171 7128627..7130075 1 NC_005027.1 PMID: 8335627 best DB hits: BLAST: gb:AAB65069.1; (U11582) No definition line found [Saccharomyces; E=6e-16 gb:AAA34582.1; (L19875) Dur3 [Saccharomyces cerevisiae]; E=1e-15 ddbj:BAB09166.1; (AB018113) urea active transporter-like protein; E=3e-11 COG: YHL016c; COG0591 Na+/proline, Na+/panthothenate symporters and; E=6e-17 PFAM: PF00474; Sodium:solute symporter family; E=1.4e-07; urea transporter or sodium transporter 7130075 dur3 1793171 dur3 Rhodopirellula baltica SH 1 urea transporter or sodium transporter NP_870967.1 7128627 D 243090 CDS NP_870968.1 32477974 1792640 complement(7130061..7130249) 1 NC_005027.1 hypothetical protein 7130249 1792640 RB13300 Rhodopirellula baltica SH 1 hypothetical protein NP_870968.1 7130061 R 243090 CDS NP_870969.1 32477975 1794344 7130204..7131286 1 NC_005027.1 PMID: 6364131 PMID: 6302686 PMID: 6341995 PMID: 10318893 PMID: 2271529 best DB hits: BLAST: gb:AAB91125.1; (AE001099) aspartate carbamoyltransferase,; E=3e-31 swissprot:P96174; PYRB_VIBS2 ASPARTATE CARBAMOYLTRANSFERASE; E=7e-30 embl:CAC11715.1; (AL445064) probable aspartate; E=2e-29 COG: AF0106; COG0540 Aspartate carbamoyltransferase, catalytic chain; E=2e-32 AF1255; COG0078 Ornithine carbamoyltransferase; E=2e-10 PFAM: PF02729; Aspartate/ornithine carbamoyltransfe; E=3.6e-20 PF00185; Aspartate/ornithine carbamoyltransfe; E=3e-07; aspartate carbamoyltransferase 7131286 pyrB 1794344 pyrB Rhodopirellula baltica SH 1 aspartate carbamoyltransferase NP_870969.1 7130204 D 243090 CDS NP_870970.1 32477976 1793403 7131355..7133274 1 NC_005027.1 PMID: 10498721 best DB hits: BLAST: gb:AAG02363.1; AF210249_22 (AF210249) asparagine synthetase; E=1e-57 swissprot:P54420; ASNB_BACSU ASPARAGINE SYNTHETASE; E=3e-50 ddbj:BAB05227.1; (AP001512) asparagine synthetase [Bacillus; E=4e-49 COG: BS_asnB; COG0367 Asparagine synthase (glutamine-hydrolyzing); E=2e-51 PFAM: PF00310; Glutamine amidotransferases clas; E=4.1e-15 PF00733; Asparagine synthase; E=1.6e-13; asparagine synthetase 7133274 asnB 1793403 asnB Rhodopirellula baltica SH 1 asparagine synthetase NP_870970.1 7131355 D 243090 CDS NP_870971.1 32477977 1792275 7133154..7134518 1 NC_005027.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 7134518 amaB 1792275 amaB Rhodopirellula baltica SH 1 allantoate amidohydrolase NP_870971.1 7133154 D 243090 CDS NP_870972.1 32477978 1793486 7134537..7135280 1 NC_005027.1 best DB hits: BLAST: pir:G82957; hypothetical protein PA5507 [imported] - Pseudomonas; E=8e-34 embl:CAC12181.1; (AL445066) N-carbamoylsarcosine amidase related; E=2e-10 embl:CAC11866.1; (AL445065) conserved hypothetical protein; E=4e-09 COG: PA5507; COG1335 Amidases related to nicotinamidase; E=7e-35 TM0133; COG1535 2,3-Dihydro-2,3 dihydroxybenzoate synthase; E=0.001 aq_994; COG1335 Amidases related to nicotinamidase; E=0.003 PFAM: PF00857; Isochorismatase; E=3e-15; N-carbamoylsarcosine amidase related protein- amidase 7135280 1793486 RB13306 Rhodopirellula baltica SH 1 N-carbamoylsarcosine amidase related protein- amidase NP_870972.1 7134537 D 243090 CDS NP_870973.1 32477979 1790516 7135460..7136875 1 NC_005027.1 PMID: 8063110 PMID: 8195067 PMID: 11372197 best DB hits: BLAST: gb:AAD05531.1; (AF083240) c-type cytochrome precursor [Shewanella; E=5e-07 gb:AAD05534.1; (AF083240) deca-heme c-type cytochrome [Shewanella; E=4e-06 swissprot:Q57142; C554_NITEU CYTOCHROME C-554 PRECURSOR (C554); E=3e-04; c-type cytochrome precursor 7136875 1790516 RB13309 Rhodopirellula baltica SH 1 c-type cytochrome precursor NP_870973.1 7135460 D 243090 CDS NP_870974.1 32477980 1794243 7137091..7137201 1 NC_005027.1 hypothetical protein 7137201 1794243 RB13311 Rhodopirellula baltica SH 1 hypothetical protein NP_870974.1 7137091 D 243090 CDS NP_870975.1 32477981 1793555 complement(7137173..7138438) 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein 7138438 1793555 RB13312 Rhodopirellula baltica SH 1 hypothetical protein NP_870975.1 7137173 R 243090 CDS NP_870976.1 32477982 1794764 complement(7138623..7138898) 1 NC_005027.1 signal peptide 7138898 1794764 RB13316 Rhodopirellula baltica SH 1 signal peptide NP_870976.1 7138623 R 243090 CDS NP_870977.1 32477983 1794168 complement(7138905..7140134) 1 NC_005027.1 best DB hits: BLAST: pir:S76130; hypothetical protein - Synechocystis sp. (strain PCC; E=0.002 PFAM: PF00981; Rotavirus RNA-binding Protein 53 (N; E=0.37; hypothetical protein 7140134 1794168 RB13317 Rhodopirellula baltica SH 1 hypothetical protein NP_870977.1 7138905 R 243090 CDS NP_870978.1 32477984 1790341 complement(7140082..7140198) 1 NC_005027.1 hypothetical protein 7140198 1790341 RB13318 Rhodopirellula baltica SH 1 hypothetical protein NP_870978.1 7140082 R 243090 CDS NP_870979.1 32477985 1790037 complement(7140295..7141560) 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein 7141560 1790037 RB13319 Rhodopirellula baltica SH 1 hypothetical protein NP_870979.1 7140295 R 243090 CDS NP_870980.1 32477986 1793099 7141536..7141673 1 NC_005027.1 hypothetical protein 7141673 1793099 RB13323 Rhodopirellula baltica SH 1 hypothetical protein NP_870980.1 7141536 D 243090 CDS NP_870981.1 32477987 1790140 7141677..7141787 1 NC_005027.1 hypothetical protein 7141787 1790140 RB13324 Rhodopirellula baltica SH 1 hypothetical protein NP_870981.1 7141677 D 243090 CDS NP_870982.1 32477988 1794265 complement(7142044..7142310) 1 NC_005027.1 hypothetical protein 7142310 1794265 RB13325 Rhodopirellula baltica SH 1 hypothetical protein NP_870982.1 7142044 R 243090 CDS NP_870983.1 32477989 1790705 complement(7142336..7143601) 1 NC_005027.1 best DB hits: PFAM: PF00114; Pilin (bacterial filament); E=0.038; hypothetical protein 7143601 1790705 RB13327 Rhodopirellula baltica SH 1 hypothetical protein NP_870983.1 7142336 R 243090 CDS NP_870984.1 32477990 1792116 complement(7143626..7143760) 1 NC_005027.1 hypothetical protein 7143760 1792116 RB13329 Rhodopirellula baltica SH 1 hypothetical protein NP_870984.1 7143626 R 243090 CDS NP_870985.1 32477991 1794573 complement(7143770..7145536) 1 NC_005027.1 best DB hits: BLAST: gb:AAF26789.1; AC016829_13 (AC016829) O-linked GlcNAc; E=7e-08 gb:AAF51432.1; (AE003587) BcDNA:GH12144 gene product [Drosophila; E=3e-05 pir:S74806; hypothetical protein sll1628 - Synechocystis sp. (strain; E=2e-04 COG: sll1628; COG0457 TPR-repeat-containing proteins; E=2e-05 PFAM: PF02516; Oligosaccharyl transferase STT3 subu; E=0.29 PF00515; TPR Domain; E=0.03; O-linked GlcNAc transferase- TPR-containing transmembrane protein 7145536 1794573 RB13330 Rhodopirellula baltica SH 1 O-linked GlcNAc transferase- TPR-containing transmembrane protein NP_870985.1 7143770 R 243090 CDS