-- dump date 20140620_025136 -- class Genbank::CDS -- table cds_note -- id note YP_345167.1 IMG reference gene:2512957466; PFAM: Protein of unknown function, DUF583 YP_345168.2 IMG reference gene:2512957467; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain; truncated by 6 aa YP_345169.1 IMG reference gene:2512957468; PFAM: Bacterial extracellular solute-binding protein YP_345170.1 IMG reference gene:2512957469; PFAM: Binding-protein-dependent transport system inner membrane component YP_345171.1 IMG reference gene:2512957470; PFAM: Binding-protein-dependent transport system inner membrane component YP_345172.1 IMG reference gene:2512957471; PFAM: ABC transporter; TOBE domain YP_345173.1 IMG reference gene:2512957472; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase YP_345174.1 IMG reference gene:2512957473; PFAM: Aldehyde dehydrogenase family; TIGRFAM: succinate-semialdehyde dehydrogenase YP_345175.1 IMG reference gene:2512957474; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; tartrate dehydrogenase YP_345176.1 IMG reference gene:2512957475; PFAM: DeoC/LacD family aldolase YP_345177.1 IMG reference gene:2512957476; PFAM: pfkB family carbohydrate kinase YP_345178.1 IMG reference gene:2512957477; PFAM: Acyltransferase family YP_345179.1 IMG reference gene:2512957478 YP_345180.1 IMG reference gene:2512957479; PFAM: Putative ammonia monooxygenase; TIGRFAM: membrane protein AbrB duplication YP_345181.1 IMG reference gene:2512957480; PFAM: Major Facilitator Superfamily YP_345182.2 IMG reference gene:2512957481; truncated by 26 aa YP_345183.1 IMG reference gene:2512957482; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: plasmid partitioning protein RepA YP_345184.1 IMG reference gene:2512957483; PFAM: ParB-like nuclease domain; RepB plasmid partitioning protein; TIGRFAM: ParB-like partition proteins; plasmid partitioning protein RepB YP_345185.2 IMG reference gene:2512957484; PFAM: Replication protein C C-terminal region; Replication protein C N-terminal domain; truncated by 6 aa YP_008686446.1 IMG reference gene:2512957485; new gene YP_345186.1 IMG reference gene:2512957487; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_345187.1 IMG reference gene:2512957488; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_345188.1 IMG reference gene:2512957489; PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II YP_345189.2 IMG reference gene:2512957490; PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family; truncated by 12 aa YP_345190.1 IMG reference gene:2512957491; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_345191.1 IMG reference gene:2512957492; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_345192.1 IMG reference gene:2512957493 YP_345193.1 IMG reference gene:2512957494; PFAM: FAD dependent oxidoreductase YP_345194.1 IMG reference gene:2512957495; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: sulfoacetaldehyde acetyltransferase YP_345195.1 IMG reference gene:2512957496; PFAM: Conserved hypothetical protein 698; TIGRFAM: conserved hypothetical integral membrane protein YP_345196.1 IMG reference gene:2512957497; PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase YP_345197.1 IMG reference gene:2512957498; PFAM: Trimethylamine methyltransferase (MTTB) YP_345198.1 IMG reference gene:2512957499; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YP_345199.1 IMG reference gene:2512957500; PFAM: short chain dehydrogenase YP_345200.1 IMG reference gene:2512957501; PFAM: short chain dehydrogenase YP_345201.1 IMG reference gene:2512957502; PFAM: FAD dependent oxidoreductase YP_345202.1 IMG reference gene:2512957503; PFAM: Aldehyde dehydrogenase family YP_345203.1 IMG reference gene:2512957504; PFAM: Dihydrodipicolinate synthetase family YP_345204.2 IMG reference gene:2512957505; PFAM: Bacterial regulatory proteins, gntR family; FCD domain; truncated by 17 aa YP_345205.1 IMG reference gene:2512957506; PFAM: ABC transporter; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit YP_345206.1 IMG reference gene:2512957507; PFAM: Binding-protein-dependent transport system inner membrane component YP_345207.1 IMG reference gene:2512957508; PFAM: Substrate binding domain of ABC-type glycine betaine transport system YP_345208.1 IMG reference gene:2512957509; PFAM: DJ-1/PfpI family YP_345209.1 IMG reference gene:2512957510; PFAM: Protein of unknown function (DUF3365) YP_345210.1 IMG reference gene:2512957511 YP_345211.1 IMG reference gene:2512957512; PFAM: Hemolysin-type calcium-binding repeat (2 copies); Bacterial pre-peptidase C-terminal domain; Peptidase M10 serralysin C terminal YP_345212.2 IMG reference gene:2512957513; PFAM: Protein of unknown function (DUF421); truncated by 66 aa YP_345213.1 IMG reference gene:2512957514; PFAM: Protein of unknown function (DUF3620) YP_345214.1 IMG reference gene:2512957515; PFAM: Esterase PHB depolymerase; TIGRFAM: esterase, PHB depolymerase family YP_345215.1 IMG reference gene:2512957516 YP_345216.1 IMG reference gene:2512957517; PFAM: NAD dependent epimerase/dehydratase family YP_345217.2 IMG reference gene:2512957518; truncated by 20 aa YP_345218.2 IMG reference gene:2512957519; PFAM: Rhamnan synthesis protein F; Glycosyl transferases group 1; extended by 28 aa on C-terminus; frameshift eliminated; truncated in old version YP_345219.1 IMG reference gene:2512957520 YP_345220.1 IMG reference gene:2512957521 YP_345221.1 IMG reference gene:2512957522; PFAM: KaiC YP_345222.1 IMG reference gene:2512957523; PFAM: KaiB domain YP_345223.1 IMG reference gene:2512957524; PFAM: HWE histidine kinase; PAS fold YP_345224.1 IMG reference gene:2512957525 YP_345225.1 IMG reference gene:2512957526; PFAM: Universal stress protein family YP_345226.1 IMG reference gene:2512957527; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain YP_345227.1 IMG reference gene:2512957528; PFAM: Rieske [2Fe-2S] domain YP_345228.1 IMG reference gene:2512957529; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_008686447.1 IMG reference gene:2512957530; new gene YP_345229.1 IMG reference gene:2512957531 YP_345230.1 IMG reference gene:2512957532; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_345231.2 IMG reference gene:2512957533; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; extended by 2 aa YP_345232.1 IMG reference gene:2512957534; PFAM: Transketolase, thiamine diphosphate binding domain YP_345233.1 IMG reference gene:2512957535; PFAM: AsnC family YP_345234.1 IMG reference gene:2512957536; PFAM: short chain dehydrogenase YP_345235.1 IMG reference gene:2512957537; PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_345236.1 IMG reference gene:2512957538; PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_345237.1 IMG reference gene:2512957539; PFAM: Prokaryotic protein of unknown function (DUF849) YP_345238.1 IMG reference gene:2512957540; PFAM: Receptor family ligand binding region YP_345239.1 IMG reference gene:2512957541; PFAM: Branched-chain amino acid transport system / permease component YP_345240.1 IMG reference gene:2512957542; PFAM: Branched-chain amino acid transport system / permease component YP_345241.1 IMG reference gene:2512957543; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter YP_345242.1 IMG reference gene:2512957544; PFAM: ABC transporter YP_345243.1 IMG reference gene:2512957545; PFAM: short chain dehydrogenase YP_345244.1 IMG reference gene:2512957546; TIGRFAM: 3-oxoadipate enol-lactonase YP_345245.1 IMG reference gene:2512957547; PFAM: short chain dehydrogenase YP_345246.2 IMG reference gene:2512957548; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; frameshift eliminated; split gene; old version was an artificial fusion YP_008686448.1 IMG reference gene:2512957549; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain; frameshift eliminated; new gene; split gene; old version was an artificial fusion YP_345247.1 IMG reference gene:2512957550; PFAM: short chain dehydrogenase YP_345248.1 IMG reference gene:2512957551; PFAM: Flavin reductase like domain YP_345249.1 IMG reference gene:2512957552; PFAM: SIS domain YP_345250.1 IMG reference gene:2512957553; PFAM: Lyase; TIGRFAM: argininosuccinate lyase YP_345251.1 IMG reference gene:2512957554 YP_345252.1 IMG reference gene:2512957555; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_345253.1 IMG reference gene:2512957556; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_345254.1 IMG reference gene:2512957557; PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_345255.1 IMG reference gene:2512957558; PFAM: ABC transporter YP_345256.1 IMG reference gene:2512957559; PFAM: Asparaginase YP_345257.1 IMG reference gene:2512957560; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain YP_345258.1 IMG reference gene:2512957561; PFAM: ABC transporter; TOBE domain YP_345259.1 IMG reference gene:2512957562; PFAM: FAD dependent oxidoreductase YP_345260.1 IMG reference gene:2512957563; PFAM: pfkB family carbohydrate kinase YP_345261.1 IMG reference gene:2512957564; PFAM: Xylose isomerase-like TIM barrel YP_345262.1 IMG reference gene:2512957565; PFAM: Binding-protein-dependent transport system inner membrane component YP_345263.1 IMG reference gene:2512957566; PFAM: Binding-protein-dependent transport system inner membrane component YP_345264.1 IMG reference gene:2512957567; PFAM: Bacterial extracellular solute-binding protein YP_345265.1 IMG reference gene:2512957568 YP_345266.1 IMG reference gene:2512957569; PFAM: Bacterial regulatory proteins, lacI family; family YP_345268.1 Citation: Freiberg, C. et. al. (1997) Nature 387:394-401. YP_345269.1 Citation: Vorholter, F. J. et. al. (2000) Mol. Genet. Genomics 266: 79-95. Koplin, R. et. al. (1992) J. Bacteriol. 174:191-199. YP_345271.1 COG2916 YP_345272.1 Citation: Shimada, H. et al. (1996) Plant Cell Physiol. 37: 515-522. Buggy, J. J. (1994) J. Bacteriol. 176: 6936-6943. YP_345276.1 Citation: Salanoubat, M. et. al. (2002) Nature 415: 497-502. YP_345277.1 Citation: Gomelsky, M.& G. Klug. Trends in Biochemical Sciences 2002, 27: 497-500 YP_345289.1 Citation: Salanoubat, M. et. al. (2002) Nature 415: 497-502. YP_345296.1 Citation: Glasser, P. et al. Mol. Micribiol. 38: 760-771; virulence associated protein YP_345305.1 Citation: Kim, Y. R. et. al. (2003), Infect. Immuno, 71: 5461-5471. YP_345306.1 acetyltransferase believed to catalyze the addition of the acetyl group that is attached through an O linkage to the first fucosyl residue of the colanic acid repetitive unit (E unit) YP_345310.1 similar to CapF protein YP_345311.1 COG0500 YP_345318.1 Citation: Rizzi, M. et. al. (1998) Structure, 6: 1453-1465. YP_345319.1 Citation: Yamasaki, S. et. al. (1999) Gene, 237: 321-332. YP_345320.1 Citation: Skurnik, M. et. al. (2000) Mol.Microbiol. 37: 316-330. YP_345323.1 similar to RepA of pSD20 (Reugeria sp. PR1b, NP_861976); Citation: Zhong, Z. et. al. (2003) Plasmid, 49: 233-252. YP_345324.1 similar to RepB of pSD20 (NP_861977); Citation: Zhong, Z. et. al. (2003) Plasmid, 49: 233-252. YP_345325.1 Citation: Zhong, Z. et. al. (2003) Plasmid, 49: 233-252. YP_345326.1 Citation: White, O. et. al. (1999) Science 286: 1571-1577. YP_345327.1 Citation: Bhoo, S. H. et. al. (2001) Nature, 414: 776-779. YP_345329.1 Citation: Berks, B. C. et. al. (1995) Biochem. J. 309: 983-992. YP_345330.1 Citation: Berks, B. C. et. al. (1995) Biochem. J. , 309: 983-992. YP_345331.1 Citation: Berks, B. C. et. al. (1995) Biochem. J., 309: 983-992. YP_345332.1 periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC YP_345333.1 Citation: Reyes, F. et. al. (1996) Mol. Microbiol. 19: 1307-1318. YP_345334.1 Citation: Reyes, F. et. al. (1996) Mo. Microbiol. 19:1307-1318. YP_345337.1 very weak homology to nodD YP_345338.1 Citation: kaneko, T. et. al. (2002) DNA Res. 9: 225-256. YP_345344.1 Citation: Pereg-Gerk, L. et. al. (1998) Mol. Plant Microbe Interaction, 11: 177-187. YP_345347.1 COG2771 YP_345348.1 similar to SPO3714 from Silicibacter pomeroyi YP_345349.2 IMG reference gene:2512957716; extended by 87 aa YP_345350.1 IMG reference gene:2512957717; PFAM: VirC1 protein YP_008686430.1 IMG reference gene:2512957718; new gene YP_008686431.1 IMG reference gene:2512957719; new gene YP_008686432.1 IMG reference gene:2512957720; new gene YP_008686433.1 IMG reference gene:2512957721; new gene YP_008686434.1 IMG reference gene:2512957722; new gene YP_008686435.1 IMG reference gene:2512957723; new gene YP_345351.1 IMG reference gene:2512957724; PFAM: Uncharacterised ACR, COG2135 YP_008686436.1 IMG reference gene:2512957725; PFAM: Rv0623-like transcription factor; new gene YP_345352.1 IMG reference gene:2512957726 YP_345353.2 IMG reference gene:2512957727; truncated by 22 aa YP_008686437.1 IMG reference gene:2512957728; new gene YP_345354.1 IMG reference gene:2512957729 YP_345355.1 IMG reference gene:2512957730; PFAM: Protein of unknown function (DUF3768) YP_345356.1 IMG reference gene:2512957731; PFAM: Plasmid pRiA4b ORF-3-like protein YP_345358.1 IMG reference gene:2512957733; PFAM: LysE type translocator YP_345359.1 IMG reference gene:2512957734; PFAM: Uncharacterized protein conserved in bacteria (DUF2332) YP_345362.1 IMG reference gene:2512957738; PFAM: Radical SAM superfamily YP_345363.2 IMG reference gene:2512957739; PFAM: Methyltransferase domain; extended by 42 aa YP_345364.1 IMG reference gene:2512957740; PFAM: HMGL-like YP_345365.1 IMG reference gene:2512957741 YP_345366.1 IMG reference gene:2512957742; PFAM: Cys/Met metabolism PLP-dependent enzyme YP_345367.1 IMG reference gene:2512957743 YP_345368.1 IMG reference gene:2512957744; PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing) YP_345369.1 IMG reference gene:2512957746; PFAM: Transposase IS66 family YP_345370.1 IMG reference gene:2512957747; PFAM: IS66 Orf2 like protein YP_345371.1 IMG reference gene:2512957748; PFAM: Transposase YP_345372.1 IMG reference gene:2512957752 YP_345373.1 IMG reference gene:2512957753 YP_008686438.1 IMG reference gene:2512957754; PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein; new gene YP_008686439.1 IMG reference gene:2512957755; new gene YP_345374.1 IMG reference gene:2512957757; PFAM: Transposase YP_345377.1 IMG reference gene:2512957760; PFAM: Replication protein C N-terminal domain; Replication protein C C-terminal region YP_345378.1 IMG reference gene:2512957761; PFAM: ParB-like nuclease domain; RepB plasmid partitioning protein; TIGRFAM: ParB-like partition proteins; plasmid partitioning protein RepB YP_345379.1 IMG reference gene:2512957762; PFAM: MerR family regulatory protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: plasmid partitioning protein RepA YP_345380.1 IMG reference gene:2512957763; PFAM: SpoVT / AbrB like domain YP_345381.1 IMG reference gene:2512957764; PFAM: PIN domain YP_345382.1 IMG reference gene:2512957765; PFAM: Resolvase, N terminal domain YP_345383.1 IMG reference gene:2512957766; PFAM: Heme oxygenase YP_345384.1 IMG reference gene:2512957767; PFAM: EAL domain; GGDEF domain; GAF domain; Phytochrome region; PAS fold; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_345385.1 IMG reference gene:2512957769 YP_345386.1 IMG reference gene:2512957770; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold YP_345387.1 IMG reference gene:2512957771; PFAM: Response regulator receiver domain YP_345389.1 IMG reference gene:2512957773; PFAM: Sulfate transporter family; STAS domain YP_008686440.1 IMG reference gene:2512957774; PFAM: Universal stress protein family; joined gene, RSP_7389, RSP_4198; pseudogene eliminated by correction of frameshift YP_345390.1 IMG reference gene:2512957775; PFAM: Prokaryotic dksA/traR C4-type zinc finger YP_345391.1 IMG reference gene:2512957776; PFAM: Major Facilitator Superfamily YP_345392.1 IMG reference gene:2512957777 YP_345393.1 IMG reference gene:2512957778; PFAM: Predicted permease YP_345394.1 IMG reference gene:2512957779; TIGRFAM: small redox-active disulfide protein 2 YP_345395.1 IMG reference gene:2512957780 YP_345396.1 IMG reference gene:2512957782; PFAM: Glycosyl transferases group 1 YP_345398.1 IMG reference gene:2512957783; PFAM: Acyltransferase family YP_345399.1 IMG reference gene:2512957784; PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_345400.1 IMG reference gene:2512957785; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I YP_345401.1 IMG reference gene:2512957786 YP_345404.1 IMG reference gene:2512957790; PFAM: Replication protein C N-terminal domain; Replication protein C C-terminal region YP_008686441.1 IMG reference gene:2512957791; new gene YP_008686442.1 IMG reference gene:2512957792; new gene YP_345405.1 IMG reference gene:2512957793 YP_345406.1 IMG reference gene:2512957794; PFAM: TraL protein; TIGRFAM: type IV conjugative transfer system protein TraL YP_345407.1 IMG reference gene:2512957795; PFAM: TraE protein YP_345408.1 IMG reference gene:2512957796; PFAM: TraK protein YP_345409.1 IMG reference gene:2512957797; PFAM: Bacterial conjugation TrbI-like protein YP_345410.1 IMG reference gene:2512957798; PFAM: Type IV conjugative transfer system lipoprotein (TraV); TIGRFAM: type IV conjugative transfer system lipoprotein TraV YP_345411.1 IMG reference gene:2512957799; PFAM: F pilus assembly Type-IV secretion system for plasmid transfer; TIGRFAM: type-IV secretion system protein TraC YP_345412.1 IMG reference gene:2512957800 YP_345413.1 IMG reference gene:2512957801; PFAM: Type-F conjugative transfer system protein (TrbI_Ftype) YP_345414.1 IMG reference gene:2512957802; PFAM: Peptidase S26 YP_345415.1 IMG reference gene:2512957803; PFAM: Sex factor F TraW protein N terminal; TIGRFAM: type-F conjugative transfer system protein TraW YP_345416.1 IMG reference gene:2512957804; PFAM: TraU protein YP_345417.1 IMG reference gene:2512957805; PFAM: Type-F conjugative transfer system pilin assembly protein; TIGRFAM: type-F conjugative transfer system pilin assembly protein TrbC YP_345418.1 IMG reference gene:2512957806; PFAM: Mating pair stabilisation protein TraN YP_345419.1 IMG reference gene:2512957807 YP_345420.1 IMG reference gene:2512957808 YP_345421.1 IMG reference gene:2512957809 YP_345422.1 IMG reference gene:2512957810; PFAM: Conjugative relaxosome accessory transposon protein YP_345423.1 IMG reference gene:2512957811; PFAM: TraG-like protein, N-terminal region; Cell Wall Hydrolase YP_345424.1 IMG reference gene:2512957812; PFAM: Acetyltransferase (GNAT) family YP_008686443.1 IMG reference gene:2512957813; new gene YP_345425.1 IMG reference gene:2512957814; PFAM: Hemolysin-type calcium-binding repeat (2 copies) YP_008686444.1 IMG reference gene:2512957815; PFAM: Helix-turn-helix; new gene YP_345426.2 IMG reference gene:2512957816; PFAM: Protein of unknown function (DUF497); extended by 4 aa YP_345427.1 IMG reference gene:2512957817; PFAM: Domain of unknown function (DUF955) YP_008686445.1 IMG reference gene:2512957818; new gene YP_345428.2 IMG reference gene:2512957819; extended by 7 aa YP_345429.1 IMG reference gene:2512957820 YP_345430.1 IMG reference gene:2512957821 YP_345431.1 IMG reference gene:2512957822 YP_345432.1 IMG reference gene:2512957823 YP_345433.2 IMG reference gene:2512957824; extended by 1 aa YP_345434.1 IMG reference gene:2512957825; PFAM: Protein of unknown function (DUF2726) YP_345435.1 IMG reference gene:2512957826 YP_351472.1 IMG reference gene:2512953321; PFAM: Plasmid recombination enzyme YP_351473.1 IMG reference gene:2512953322 YP_351474.1 IMG reference gene:2512953323 YP_351475.1 IMG reference gene:2512953324 YP_351476.1 IMG reference gene:2512953325; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative quinone oxidoreductase, YhdH/YhfP family YP_351477.1 IMG reference gene:2512953326; PFAM: Bacterial regulatory proteins, tetR family YP_351478.1 IMG reference gene:2512953327; PFAM: ABC transporter YP_351479.1 IMG reference gene:2512953328; PFAM: ABC transporter YP_351480.1 IMG reference gene:2512953329; PFAM: FecCD transport family YP_351481.1 IMG reference gene:2512953330; PFAM: Periplasmic binding protein YP_351482.1 IMG reference gene:2512953331; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor YP_351483.1 IMG reference gene:2512953332; PFAM: ROK family YP_351484.1 IMG reference gene:2512953333; PFAM: Bacterial extracellular solute-binding protein YP_351485.2 IMG reference gene:2512953334; PFAM: Binding-protein-dependent transport system inner membrane component; truncated by 7 aa YP_351486.1 IMG reference gene:2512953335; PFAM: Binding-protein-dependent transport system inner membrane component YP_351487.1 IMG reference gene:2512953336; PFAM: ABC transporter; TOBE domain YP_351488.1 IMG reference gene:2512953337; PFAM: BadF/BadG/BcrA/BcrD ATPase family YP_351489.1 IMG reference gene:2512953338; PFAM: SIS domain YP_351490.1 IMG reference gene:2512953339; PFAM: Beta-eliminating lyase YP_351491.1 IMG reference gene:2512953340; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain YP_351492.1 IMG reference gene:2512953341; PFAM: Inositol monophosphatase family; TIGRFAM: histidinol-phosphate phosphatase HisN, inositol monophosphatase family YP_351493.1 IMG reference gene:2512953342; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_351494.1 IMG reference gene:2512953343; PFAM: Binding-protein-dependent transport system inner membrane component YP_351495.1 IMG reference gene:2512953344; PFAM: Binding-protein-dependent transport system inner membrane component YP_351496.1 IMG reference gene:2512953345; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_351497.1 IMG reference gene:2512953346; PFAM: Peptidase family M20/M25/M40; TIGRFAM: amidase, hydantoinase/carbamoylase family YP_351498.1 IMG reference gene:2512953347; PFAM: Phosphotransferase enzyme family YP_351499.1 IMG reference gene:2512953348; PFAM: Choline/ethanolamine kinase YP_008686483.1 IMG reference gene:2512953349; new gene YP_351500.1 IMG reference gene:2512953350; PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family YP_351501.1 IMG reference gene:2512953351; PFAM: Peptidase inhibitor I78 family YP_351502.1 IMG reference gene:2512953352; PFAM: Protein of unknown function DUF88 YP_351503.1 IMG reference gene:2512953353 YP_351504.1 IMG reference gene:2512953354; PFAM: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) YP_351505.1 IMG reference gene:2512953355; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase YP_351506.1 IMG reference gene:2512953356; PFAM: CoA-transferase family III YP_351507.1 IMG reference gene:2512953357 YP_351508.1 IMG reference gene:2512953358; PFAM: Protein of unknown function (DUF721) YP_351509.1 IMG reference gene:2512953359; PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: A/G-specific adenine glycosylase YP_351510.1 IMG reference gene:2512953360; PFAM: Fatty acid desaturase YP_351511.1 IMG reference gene:2512953361; PFAM: DNA methylase YP_351512.1 IMG reference gene:2512953362; PFAM: Ribonuclease HII YP_351513.1 IMG reference gene:2512953363 YP_351514.2 IMG reference gene:2512953364; truncated by 91 aa YP_351515.1 IMG reference gene:2512953365 YP_351516.1 IMG reference gene:2512953366 YP_351517.1 IMG reference gene:2512953367; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; TIGRFAM: carboxynorspermidine decarboxylase YP_351518.1 IMG reference gene:2512953368; PFAM: Saccharopine dehydrogenase YP_351519.2 IMG reference gene:2512953369; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase YP_351520.1 IMG reference gene:2512953370 YP_351521.1 IMG reference gene:2512953371; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region YP_351522.1 IMG reference gene:2512953372; PFAM: Binding-protein-dependent transport system inner membrane component YP_351523.1 IMG reference gene:2512953373; PFAM: Binding-protein-dependent transport system inner membrane component YP_351524.1 IMG reference gene:2512953374; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_351525.1 IMG reference gene:2512953376 YP_351526.2 IMG reference gene:2512953377; PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; frameshift eliminated due to sequence change; joined gene, RSP_1484, RSP_1485 YP_351528.1 IMG reference gene:2512953378; PFAM: Bacterial regulatory proteins, tetR family YP_351529.1 IMG reference gene:2512953379; PFAM: Protein of unknown function (DUF1428) YP_351530.1 IMG reference gene:2512953380 YP_351531.1 IMG reference gene:2512953381; PFAM: Thioredoxin; TIGRFAM: thioredoxin YP_351532.1 IMG reference gene:2512953382; PFAM: ATP-dependent protease La (LON) domain YP_351533.1 IMG reference gene:2512953383; PFAM: Trm112p-like protein YP_351534.1 IMG reference gene:2512953384; PFAM: FAD binding domain; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family YP_351535.2 IMG reference gene:2512953385; PFAM: Amidase; extended by 5 aa YP_351536.1 IMG reference gene:2512953386; PFAM: Aminotransferase class I and II YP_351537.1 IMG reference gene:2512953387; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family YP_351538.1 IMG reference gene:2512953388; PFAM: Outer membrane lipoprotein carrier protein LolA YP_351539.1 IMG reference gene:2512953389 YP_351540.2 IMG reference gene:2512953390; PFAM: Hemimethylated DNA-binding protein YccV like; TIGRFAM: hemimethylated DNA binding domain; truncated by 13 aa YP_351541.1 IMG reference gene:2512953391; PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase YP_351542.1 IMG reference gene:2512953392; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_351543.1 IMG reference gene:2512953393; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor YP_351544.1 IMG reference gene:2512953394; PFAM: GAF domain YP_351545.2 IMG reference gene:2512953395; PFAM: Glutathione-dependent formaldehyde-activating enzyme; extended by 8 aa YP_351546.1 IMG reference gene:2512953396 YP_351547.1 IMG reference gene:2512953397; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family YP_351548.1 IMG reference gene:2512953398; TIGRFAM: phosphoesterase, MJ0936 family YP_351549.1 IMG reference gene:2512953399; PFAM: Aldehyde dehydrogenase family YP_351550.1 IMG reference gene:2512953401; PFAM: HemY protein N-terminus YP_351551.1 IMG reference gene:2512953402 YP_351552.1 IMG reference gene:2512953403; PFAM: Uroporphyrinogen-III synthase HemD YP_351553.1 IMG reference gene:2512953404; PFAM: Glycoprotease family; TIGRFAM: putative glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family YP_351554.1 IMG reference gene:2512953405; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus YP_351555.1 IMG reference gene:2512953406; PFAM: YCII-related domain YP_351556.1 IMG reference gene:2512953407; PFAM: Protein of unknown function DUF55 YP_351557.1 IMG reference gene:2512953408; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit YP_351558.1 IMG reference gene:2512953409; PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase YP_351559.2 IMG reference gene:2512953410; PFAM: Glycosyl transferase family 8 YP_351560.1 IMG reference gene:2512953411; PFAM: HD domain YP_351561.1 IMG reference gene:2512953412; PFAM: H-NS histone family YP_351562.1 IMG reference gene:2512953413; PFAM: Response regulator receiver domain YP_351563.1 IMG reference gene:2512953414; PFAM: SCO1/SenC YP_351564.1 IMG reference gene:2512953415; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_351565.1 IMG reference gene:2512953416 YP_351566.2 IMG reference gene:2512953417; PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family; extended by 8 aa YP_351567.1 IMG reference gene:2512953418; PFAM: Phosphotransferase enzyme family YP_351568.1 IMG reference gene:2512953419 YP_351569.1 IMG reference gene:2512953420; TIGRFAM: double-strand break repair protein AddB, alphaproteobacterial type YP_351570.1 IMG reference gene:2512953421; PFAM: UvrD/REP helicase; TIGRFAM: double-strand break repair helicase AddA, alphaproteobacterial type YP_351571.1 IMG reference gene:2512953422; PFAM: Thioredoxin; TIGRFAM: thioredoxin YP_351572.1 IMG reference gene:2512953423 YP_351573.1 IMG reference gene:2512953424; PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit YP_351574.1 IMG reference gene:2512953425; PFAM: AAA domain (Cdc48 subfamily); AAA domain (dynein-related subfamily); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit YP_351575.1 IMG reference gene:2512953426; PFAM: MBOAT family YP_351576.1 IMG reference gene:2512953427 YP_351577.1 IMG reference gene:2512953428; TIGRFAM: FkbH-like domain; HAD-superfamily phosphatase, subfamily IIIC YP_351578.1 IMG reference gene:2512953429; PFAM: short chain dehydrogenase YP_351579.1 IMG reference gene:2512953430; PFAM: MaoC like domain YP_351580.1 IMG reference gene:2512953431 YP_351581.1 IMG reference gene:2512953432; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase YP_351582.1 IMG reference gene:2512953433; PFAM: Glycosyl transferase family 2 YP_351583.1 IMG reference gene:2512953434; PFAM: Hydroxyneurosporene synthase (CrtC) YP_351584.1 IMG reference gene:2512953435; PFAM: Predicted permease YP_351585.2 IMG reference gene:2512953436; PFAM: ABC transporter YP_351586.1 IMG reference gene:2512953437; PFAM: Protein of unknown function (DUF1513) YP_351587.1 IMG reference gene:2512953438; PFAM: Imelysin YP_351588.1 IMG reference gene:2512953439; PFAM: Protein of unknown function (DUF1111) YP_351589.1 IMG reference gene:2512953440; PFAM: Ferritin-like domain; TIGRFAM: bacterioferritin YP_351590.1 IMG reference gene:2512953441; PFAM: BFD-like [2Fe-2S] binding domain YP_351591.1 IMG reference gene:2512953442; PFAM: Imelysin YP_351592.1 IMG reference gene:2512953443; PFAM: Hemin uptake protein hemP YP_008686484.1 IMG reference gene:2512953444; new gene YP_351593.1 IMG reference gene:2512953445; PFAM: Protein of unknown function (DUF533) YP_351594.1 IMG reference gene:2512953446; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_351595.1 IMG reference gene:2512953447 YP_351596.1 IMG reference gene:2512953448; PFAM: Ureidoglycolate hydrolase YP_351597.1 IMG reference gene:2512953449; PFAM: Cupin domain; TIGRFAM: putative allantoin catabolism protein YP_351598.1 IMG reference gene:2512953450; PFAM: OHCU decarboxylase; Polysaccharide deacetylase; TIGRFAM: OHCU decarboxylase; putative urate catabolism protein YP_351599.1 IMG reference gene:2512953451; PFAM: HIUase/Transthyretin family; TIGRFAM: hydroxyisourate hydrolase YP_351600.1 IMG reference gene:2512953452; PFAM: Antenna complex alpha/beta subunit YP_351601.1 IMG reference gene:2512953453; PFAM: Antenna complex alpha/beta subunit YP_351602.1 IMG reference gene:2512953454; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, eukaryotic type YP_351603.1 IMG reference gene:2512953455; PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal YP_351604.1 IMG reference gene:2512953456; PFAM: AMP-binding enzyme YP_351605.1 IMG reference gene:2512953457; PFAM: Fumarylacetoacetate (FAA) hydrolase family YP_351606.2 IMG reference gene:2512953458; PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1; truncated by 8 aa YP_351607.1 IMG reference gene:2512953459; PFAM: Domain of unknown function DUF20 YP_351608.1 IMG reference gene:2512953460; PFAM: Sensors of blue-light using FAD YP_351609.1 IMG reference gene:2512953461; PFAM: CbiX YP_351610.1 IMG reference gene:2512953462; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_351611.2 IMG reference gene:2512953463; PFAM: Glutamine synthetase, catalytic domain YP_351612.1 IMG reference gene:2512953464; PFAM: Aminotransferase class-III YP_351613.1 IMG reference gene:2512953465; PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein YP_351614.1 IMG reference gene:2512953466; PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein YP_351615.1 IMG reference gene:2512953467; PFAM: Protein of unknown function (DUF465) YP_351616.2 IMG reference gene:2512953468; PFAM: Hsp20/alpha crystallin family; truncated by 9 aa YP_351617.1 IMG reference gene:2512953469; PFAM: Protein of unknown function (DUF1150) YP_351618.1 IMG reference gene:2512953470; PFAM: Cytochrome b(N-terminal)/b6/petB YP_351619.2 IMG reference gene:2512953471; PFAM: ATP-sulfurylase; Adenylylsulphate kinase; TIGRFAM: adenylylsulfate kinase (apsK); ATP sulphurylase; truncated by 19 aa YP_351620.2 IMG reference gene:2512953472; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase; truncated by 5 aa YP_351621.1 IMG reference gene:2512953473; PFAM: AsnC family YP_351622.1 IMG reference gene:2512953474; PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family YP_351623.2 IMG reference gene:2512953475; PFAM: Uncharacterized ACR, COG1565 YP_351624.1 IMG reference gene:2512953476; PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase YP_351625.1 IMG reference gene:2512953477; PFAM: Protein of unknown function (DUF526) YP_351626.2 IMG reference gene:2512953478 YP_351627.1 IMG reference gene:2512953479; PFAM: Response regulator receiver domain YP_351628.2 IMG reference gene:2512953480; PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain YP_351629.1 IMG reference gene:2512953481; PFAM: CheW-like domain YP_351630.1 IMG reference gene:2512953482; PFAM: CheW-like domain YP_351631.1 IMG reference gene:2512953483; PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain YP_351632.1 IMG reference gene:2512953484; PFAM: CheB methylesterase; Response regulator receiver domain YP_351633.1 IMG reference gene:2512953485 YP_351634.1 IMG reference gene:2512953486; PFAM: Glutathione S-transferase, C-terminal domain YP_351635.1 IMG reference gene:2512953487; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_351636.1 IMG reference gene:2512953488 YP_351637.2 IMG reference gene:2512953489; PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; truncated by 8 aa YP_351638.1 IMG reference gene:2512953490; PFAM: Malic enzyme, NAD binding domain; Phosphate acetyl/butaryl transferase; Malic enzyme, N-terminal domain YP_351639.1 IMG reference gene:2512953491; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric YP_351640.1 IMG reference gene:2512953492; PFAM: Glycosyl transferase family, a/b domain; Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: thymidine phosphorylase; pyrimidine-nucleoside phosphorylase YP_351641.1 IMG reference gene:2512953493; PFAM: Metalloenzyme superfamily; TIGRFAM: phosphopentomutase YP_351642.1 IMG reference gene:2512953494; PFAM: Adenosine/AMP deaminase; TIGRFAM: adenosine deaminase YP_351643.1 IMG reference gene:2512953495; PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase YP_351644.1 IMG reference gene:2512953496; PFAM: Sporulation related domain YP_351645.1 IMG reference gene:2512953497 YP_351646.1 IMG reference gene:2512953498; PFAM: AMP-binding enzyme YP_351647.1 IMG reference gene:2512953499; PFAM: EamA-like transporter family YP_351648.1 IMG reference gene:2512953500; PFAM: Methyltransferase domain YP_351649.1 IMG reference gene:2512953501; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_351650.1 IMG reference gene:2512953502; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_351651.1 IMG reference gene:2512953503; PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family YP_351652.1 IMG reference gene:2512953504; PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_351653.1 IMG reference gene:2512953505; PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_351654.1 IMG reference gene:2512953506; PFAM: Alcohol dehydrogenase GroES-like domain; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase YP_351655.1 IMG reference gene:2512953507; PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain YP_351656.1 IMG reference gene:2512953508; PFAM: D-galactarate dehydratase / Altronate hydrolase, C terminus; SAF domain YP_351657.1 IMG reference gene:2512953509; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_351658.1 IMG reference gene:2512953510; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_351659.1 IMG reference gene:2512953511; PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family YP_351660.1 IMG reference gene:2512953512; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein YP_351661.1 IMG reference gene:2512953513; PFAM: Domain of unknown function (DUF1850) YP_008686485.1 IMG reference gene:2512953517; new gene YP_351667.2 IMG reference gene:2512953521; PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative YP_351668.1 IMG reference gene:2512953522 YP_351669.1 IMG reference gene:2512953523; PFAM: Helix-turn-helix; Domain of unknown function (DUF955) YP_351670.1 IMG reference gene:2512953524 YP_351671.1 IMG reference gene:2512953525 YP_351672.1 IMG reference gene:2512953526 YP_351673.1 IMG reference gene:2512953527; PFAM: D12 class N6 adenine-specific DNA methyltransferase YP_351674.1 IMG reference gene:2512953528; PFAM: HWE histidine kinase; PAS fold YP_351675.1 IMG reference gene:2512953529; PFAM: Response regulator receiver domain YP_351676.1 IMG reference gene:2512953530 YP_351677.1 IMG reference gene:2512953531 YP_351678.1 IMG reference gene:2512953532 YP_351679.1 IMG reference gene:2512953533 YP_351680.1 IMG reference gene:2512953534 YP_351681.1 IMG reference gene:2512953535 YP_351682.1 IMG reference gene:2512953536 YP_351683.1 IMG reference gene:2512953537 YP_351684.1 IMG reference gene:2512953538 YP_351685.1 IMG reference gene:2512953539; PFAM: Protein of unknown function (DUF3168) YP_351686.1 IMG reference gene:2512953540 YP_351687.1 IMG reference gene:2512953541; PFAM: Bacteriophage protein of unknown function (DUF646); TIGRFAM: phage protein, HK97 gp10 family YP_351688.1 IMG reference gene:2512953542; PFAM: Phage head-tail joining protein YP_351689.1 IMG reference gene:2512953543 YP_351690.1 IMG reference gene:2512953544 YP_351691.1 IMG reference gene:2512953545; PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family YP_351692.1 IMG reference gene:2512953546; PFAM: Sulfite exporter TauE/SafE YP_351693.1 IMG reference gene:2512953547; PFAM: Peptidase family S49 YP_351694.1 IMG reference gene:2512953548; PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family YP_351695.1 IMG reference gene:2512953549; PFAM: EamA-like transporter family YP_351696.1 IMG reference gene:2512953551; PFAM: Phage Terminase YP_351697.1 IMG reference gene:2512953552; PFAM: Phage terminase, small subunit; TIGRFAM: phage terminase, small subunit, putative, P27 family YP_351698.2 IMG reference gene:2512953553; PFAM: HNH endonuclease; truncated by 23 aa YP_351699.2 IMG reference gene:2512953554; truncated by 30 aa YP_351700.1 IMG reference gene:2512953555 YP_351701.2 IMG reference gene:2512953556; truncated by 11 aa YP_351702.1 IMG reference gene:2512953557; PFAM: Domain of unknown function (DUF1937) YP_351703.1 IMG reference gene:2512953558; PFAM: Helix-turn-helix YP_351704.1 IMG reference gene:2512953559 YP_351705.1 IMG reference gene:2512953560 YP_351706.1 IMG reference gene:2512953561 YP_351707.1 IMG reference gene:2512953562; PFAM: Uncharacterized protein conserved in bacteria (DUF2312) YP_351710.1 IMG reference gene:2512953564 YP_351711.2 IMG reference gene:2512953565; PFAM: Phage integrase family; extended by 14 aa YP_351712.1 IMG reference gene:2512953567; PFAM: Bacterial regulatory proteins, lacI family; family YP_351713.1 IMG reference gene:2512953568; PFAM: Protein of unknown function (DUF3429) YP_351714.1 IMG reference gene:2512953569; PFAM: LysE type translocator YP_351715.1 IMG reference gene:2512953570; PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) YP_351716.1 IMG reference gene:2512953571; PFAM: Protein of unknown function DUF88 YP_351717.1 IMG reference gene:2512953572; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase YP_351718.1 IMG reference gene:2512953573; PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit YP_351719.1 IMG reference gene:2512953574; PFAM: HD domain; Region found in RelA / SpoT proteins; TGS domain; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family YP_351720.1 IMG reference gene:2512953575; PFAM: Uncharacterized protein conserved in bacteria (DUF2062) YP_351721.1 IMG reference gene:2512953576; PFAM: Pyridoxal phosphate biosynthesis protein PdxJ; TIGRFAM: pyridoxine 5'-phosphate synthase YP_351722.1 IMG reference gene:2512953577; PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantetheine--protein transferase domain; holo-[acyl-carrier-protein] synthase YP_351723.2 IMG reference gene:2512953578; PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; truncated by 17 aa YP_351724.1 IMG reference gene:2512953579; PFAM: Double-stranded RNA binding motif; RNase3 domain; TIGRFAM: ribonuclease III, bacterial YP_351725.1 IMG reference gene:2512953580; PFAM: GTPase of unknown function; KH domain; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain YP_351726.1 IMG reference gene:2512953581; PFAM: Protein of unknown function (DUF1491) YP_351727.1 IMG reference gene:2512953582; PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO YP_351728.2 IMG reference gene:2512953583; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; extended by 7 aa YP_351729.1 IMG reference gene:2512953584; PFAM: Phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP) YP_351730.1 IMG reference gene:2512953585; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_351731.1 IMG reference gene:2512953586; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_351732.1 IMG reference gene:2512953587; PFAM: HPr Serine kinase C-terminal domain YP_351733.1 IMG reference gene:2512953588; PFAM: P-loop ATPase protein family YP_351734.1 IMG reference gene:2512953589; PFAM: PTS system fructose IIA component YP_351735.1 IMG reference gene:2512953590; PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family YP_351736.1 IMG reference gene:2512953591; PFAM: Acyltransferase family YP_351737.1 IMG reference gene:2512953592; PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_351738.1 IMG reference gene:2512953593 YP_351739.1 IMG reference gene:2512953594; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain YP_351740.1 IMG reference gene:2512953595; PFAM: Electron transfer flavoprotein domain YP_351741.1 IMG reference gene:2512953596; PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase YP_351742.1 IMG reference gene:2512953597; PFAM: Hypoxia induced protein conserved region YP_351743.1 IMG reference gene:2512953598; PFAM: short chain dehydrogenase YP_351744.2 IMG reference gene:2512953599; PFAM: Bacterial SH3 domain YP_351745.1 IMG reference gene:2512953600; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA topoisomerase IV, A subunit, proteobacterial YP_351746.2 IMG reference gene:2512953601; truncated by 10 aa YP_351747.1 IMG reference gene:2512953602; PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU YP_351748.1 IMG reference gene:2512953603; PFAM: Bacterial transferase hexapeptide (three repeats) YP_351749.1 IMG reference gene:2512953605; PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial YP_351750.1 IMG reference gene:2512953606; PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG YP_351751.1 IMG reference gene:2512953607; PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11 YP_351752.1 IMG reference gene:2512953608; PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast YP_351753.1 IMG reference gene:2512953609; PFAM: Ribosomal protein L10 YP_351754.1 IMG reference gene:2512953610; PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12 YP_351755.1 IMG reference gene:2512953611; PFAM: RNA polymerase Rpb2, domain 6; RNA polymerase Rpb2, domain 7; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 3; RNA polymerase beta subunit external 1 domain; TIGRFAM: DNA-directed RNA polymerase, beta subunit YP_351756.1 IMG reference gene:2512953612; PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form YP_351757.1 IMG reference gene:2512953613; PFAM: EamA-like transporter family YP_351758.1 IMG reference gene:2512953614; PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle YP_351759.1 IMG reference gene:2512953615; PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle YP_351760.1 IMG reference gene:2512953616; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain YP_351761.1 IMG reference gene:2512953617; PFAM: Elongation factor Tu C-terminal domain; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU YP_351762.1 IMG reference gene:2512953618; PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle YP_351763.1 IMG reference gene:2512953619; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial YP_351764.1 IMG reference gene:2512953620; PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle YP_351765.1 IMG reference gene:2512953621; PFAM: Ribosomal protein L23 YP_351766.1 IMG reference gene:2512953622; PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar YP_351767.1 IMG reference gene:2512953623; PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle YP_351768.1 IMG reference gene:2512953624; PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type YP_351769.1 IMG reference gene:2512953625; PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type YP_351770.1 IMG reference gene:2512953626; PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle YP_351771.1 IMG reference gene:2512953627; PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29 YP_351772.1 IMG reference gene:2512953628; PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17 YP_351773.1 IMG reference gene:2512953629; PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle YP_351774.1 IMG reference gene:2512953630; PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle YP_351775.1 IMG reference gene:2512953631; PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5 YP_351776.1 IMG reference gene:2512953632; PFAM: Ribosomal protein S14p/S29e YP_351777.1 IMG reference gene:2512953633; PFAM: Ribosomal protein S8 YP_351778.1 IMG reference gene:2512953634; PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type YP_351779.1 IMG reference gene:2512953635; PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type YP_351780.1 IMG reference gene:2512953636; PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type YP_351781.1 IMG reference gene:2512953637; PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle YP_351782.1 IMG reference gene:2512953638; PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle YP_351783.1 IMG reference gene:2512953639; PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit YP_351784.1 IMG reference gene:2512953640; PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases YP_351785.1 IMG reference gene:2512953641; PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13 YP_351786.1 IMG reference gene:2512953642; PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11 YP_351787.1 IMG reference gene:2512953643; PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type YP_351788.1 IMG reference gene:2512953644; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17 YP_351789.1 IMG reference gene:2512953645; PFAM: Bacterial regulatory proteins, luxR family; Autoinducer binding domain YP_351790.1 IMG reference gene:2512953646; PFAM: Trypsin; TIGRFAM: periplasmic serine protease, Do/DeqQ family YP_351791.1 IMG reference gene:2512953647; PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA) YP_351792.1 IMG reference gene:2512953648; PFAM: CrcB-like protein; TIGRFAM: protein CrcB YP_351793.1 IMG reference gene:2512953649; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family YP_351794.1 IMG reference gene:2512953650; PFAM: ATP12 chaperone protein YP_351795.1 IMG reference gene:2512953651; PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: lysine-arginine-ornithine-binding periplasmic protein YP_351796.1 IMG reference gene:2512953652; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_351797.1 IMG reference gene:2512953653; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_351798.1 IMG reference gene:2512953654; PFAM: ABC transporter YP_351799.1 IMG reference gene:2512953655; PFAM: 2Fe-2S iron-sulfur cluster binding domain YP_351800.1 IMG reference gene:2512953656; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain YP_351801.1 IMG reference gene:2512953657 YP_351802.2 IMG reference gene:2512953658; PFAM: L,D-transpeptidase catalytic domain; truncated by 17 aa YP_351803.1 IMG reference gene:2512953659; PFAM: Protein of unknown function (DUF861) YP_351804.1 IMG reference gene:2512953660; PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_351805.1 IMG reference gene:2512953661; PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; cytidyltransferase-related domain YP_351806.1 IMG reference gene:2512953662; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase YP_351807.1 IMG reference gene:2512953663 YP_351808.1 IMG reference gene:2512953664; PFAM: Protein of unknown function (DUF1523) YP_351809.1 IMG reference gene:2512953665; PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial YP_008686486.1 IMG reference gene:2512953666; new gene YP_351810.1 IMG reference gene:2512953667 YP_351811.1 IMG reference gene:2512953668; PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit YP_351812.1 IMG reference gene:2512953669; PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20 YP_351813.1 IMG reference gene:2512953670; PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35 YP_351814.1 IMG reference gene:2512953671; PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase YP_351815.1 IMG reference gene:2512953672; PFAM: N-formylglutamate amidohydrolase YP_351816.1 IMG reference gene:2512953673; PFAM: Aminotransferase class IV; TIGRFAM: D-amino acid aminotransferase YP_351817.1 IMG reference gene:2512953674; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YP_351818.1 IMG reference gene:2512953675; PFAM: Protein of unknown function (DUF1611) YP_351819.1 IMG reference gene:2512953676; PFAM: HpcH/HpaI aldolase/citrate lyase family YP_351820.1 IMG reference gene:2512953677; PFAM: Bacterial transcription activator, effector binding domain YP_351821.1 IMG reference gene:2512953678; PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit YP_351822.1 IMG reference gene:2512953679; PFAM: Small Multidrug Resistance protein YP_351823.1 IMG reference gene:2512953680; PFAM: Glucose / Sorbosone dehydrogenase YP_351824.1 IMG reference gene:2512953681 YP_351825.2 IMG reference gene:2512953682; PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA; truncated by 5 aa YP_351826.1 IMG reference gene:2512953683; PFAM: Electron transfer flavoprotein-ubiquinone oxidoreductase; Thi4 family YP_351828.1 IMG reference gene:2512953685; PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YP_351829.2 IMG reference gene:2512953686; extended by 8 aa YP_351830.1 IMG reference gene:2512953687; PFAM: Glucose / Sorbosone dehydrogenase; Membrane bound L-sorbosone dehydrogenase YP_351831.1 IMG reference gene:2512953688; PFAM: Predicted membrane protein (DUF2231) YP_351832.1 IMG reference gene:2512953689; PFAM: Bacterial protein of unknown function (DUF939) YP_351833.1 IMG reference gene:2512953690; PFAM: Response regulator receiver domain YP_008686487.1 IMG reference gene:2512953691; new gene YP_351834.1 IMG reference gene:2512953692; PFAM: Bacterial regulatory proteins, lacI family; family YP_351835.1 IMG reference gene:2512953693; PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; PTS HPr component phosphorylation site; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; Phosphotransferase System HPr (HPr) Family YP_351836.1 IMG reference gene:2512953694; PFAM: pfkB family carbohydrate kinase; TIGRFAM: 1-phosphofructokinase; hexose kinase, 1-phosphofructokinase family YP_351837.1 IMG reference gene:2512953695; PFAM: Phosphotransferase system, EIIC; PTS system, Lactose/Cellobiose specific IIB subunit; TIGRFAM: PTS system, fructose-specific, IIB component; PTS system, fructose subfamily, IIC component; TC 4.A.2.1.1 YP_351838.1 IMG reference gene:2512953696; PFAM: Uncharacterised BCR, YnfA/UPF0060 family YP_351839.1 IMG reference gene:2512953697; PFAM: MerR family regulatory protein; MerR, DNA binding YP_351840.1 IMG reference gene:2512953698; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase YP_351841.1 IMG reference gene:2512953699; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb) YP_351842.1 IMG reference gene:2512953700; PFAM: Transglycosylase SLT domain YP_351843.1 IMG reference gene:2512953701; PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase YP_351844.1 IMG reference gene:2512953702; PFAM: Copper/zinc superoxide dismutase (SODC) YP_351845.1 IMG reference gene:2512953703; PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit YP_351846.1 IMG reference gene:2512953704; PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family YP_351847.1 IMG reference gene:2512953705; PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF YP_351848.1 IMG reference gene:2512953706; PFAM: Protein of unknown function (DUF498/DUF598) YP_351849.1 IMG reference gene:2512953707; PFAM: ABC transporter; TIGRFAM: heme ABC exporter, ATP-binding protein CcmA YP_351850.1 IMG reference gene:2512953708; PFAM: CcmB protein; TIGRFAM: heme exporter protein CcmB YP_351851.2 IMG reference gene:2512953709; PFAM: Cytochrome C assembly protein; TIGRFAM: heme exporter protein CcmC YP_351852.1 IMG reference gene:2512953710; PFAM: Heme exporter protein D (CcmD); TIGRFAM: heme exporter protein CcmD YP_351853.1 IMG reference gene:2512953711; PFAM: Redoxin; TIGRFAM: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily YP_351854.4 IMG reference gene:2512953712; PFAM: Aconitase family (aconitate hydratase); Aconitase C-terminal domain; TIGRFAM: aconitate hydratase 1; truncated by 20 aa YP_351855.1 IMG reference gene:2512953713; PFAM: Protein of unknown function (DUF1223) YP_351856.1 IMG reference gene:2512953714 YP_351857.2 IMG reference gene:2512953715; PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase; truncated by 10 aa YP_008686488.1 IMG reference gene:2512953716; PFAM: Rhomboid family; extended by 114 aa; old pseudo, frameshift corrected YP_351858.1 IMG reference gene:2512953717; PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN YP_351859.1 IMG reference gene:2512953718; PFAM: GlnD PII-uridylyltransferase; HD domain; Glutamate-ammonia ligase adenylyltransferase; ACT domain; TIGRFAM: [Protein-PII] uridylyltransferase YP_351860.1 IMG reference gene:2512953719; PFAM: LppC putative lipoprotein YP_351861.1 IMG reference gene:2512953720; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family YP_351862.1 IMG reference gene:2512953721; PFAM: Uncharacterised protein family UPF0102 YP_351863.1 IMG reference gene:2512953722; PFAM: Prokaryotic glutathione synthetase, N-terminal domain; Prokaryotic glutathione synthetase, ATP-grasp domain; TIGRFAM: glutathione synthetase, prokaryotic YP_351864.1 IMG reference gene:2512953723; PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein YP_351865.1 IMG reference gene:2512953724; PFAM: FeoC like transcriptional regulator YP_351866.1 IMG reference gene:2512953725; PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain YP_351867.1 IMG reference gene:2512953726; PFAM: FeoA domain YP_351868.1 IMG reference gene:2512953727; PFAM: FeoA domain YP_351869.1 IMG reference gene:2512953728; PFAM: Domain of unknown function (DUF892) YP_351870.1 IMG reference gene:2512953729; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit YP_351871.1 IMG reference gene:2512953730; PFAM: Competence-damaged protein; NAD synthase; TIGRFAM: NAD+ synthetase; competence/damage-inducible protein CinA C-terminal domain YP_351872.1 IMG reference gene:2512953731; PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain YP_351873.1 IMG reference gene:2512953732; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_351874.1 IMG reference gene:2512953733; PFAM: Putative modulator of DNA gyrase YP_351875.1 IMG reference gene:2512953734; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome C oxidase subunit II, transmembrane domain; TIGRFAM: cytochrome c oxidase, subunit II YP_351876.1 IMG reference gene:2512953735; PFAM: UbiA prenyltransferase family; TIGRFAM: protoheme IX farnesyltransferase YP_351877.1 IMG reference gene:2512953736 YP_351878.1 IMG reference gene:2512953737; PFAM: Cytochrome c oxidase assembly protein CtaG/Cox11 YP_351879.1 IMG reference gene:2512953738; PFAM: Cytochrome c oxidase subunit III YP_351880.1 IMG reference gene:2512953739; PFAM: SURF1 family YP_351881.1 IMG reference gene:2512953740; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase YP_351882.1 IMG reference gene:2512953741; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16) YP_351883.1 IMG reference gene:2512953742; PFAM: Acetyltransferase (GNAT) family YP_351884.1 IMG reference gene:2512953743 YP_351885.2 IMG reference gene:2512953744; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain YP_351886.1 IMG reference gene:2512953745; PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase YP_351887.1 IMG reference gene:2512953746; PFAM: Phosphorylase superfamily; TIGRFAM: 5'-deoxy-5'-methylthioadenosine phosphorylase YP_351888.1 IMG reference gene:2512953747; PFAM: Flavin reductase like domain YP_351889.1 IMG reference gene:2512953748; PFAM: Acetyltransferase (GNAT) family YP_351890.1 IMG reference gene:2512953749 YP_351891.1 IMG reference gene:2512953750; PFAM: Intracellular septation protein A; TIGRFAM: intracellular septation protein A YP_351892.1 IMG reference gene:2512953751; PFAM: EamA-like transporter family YP_351893.2 IMG reference gene:2512953752; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY; truncated by 12 aa YP_351894.1 IMG reference gene:2512953753 YP_351895.1 IMG reference gene:2512953754; PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit YP_351896.1 IMG reference gene:2512953755 YP_351897.1 IMG reference gene:2512953756; PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase YP_351898.1 IMG reference gene:2512953757; PFAM: Pyruvate kinase, barrel domain YP_351899.1 IMG reference gene:2512953758; PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase YP_351900.1 IMG reference gene:2512953759; PFAM: GAF domain; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase YP_351901.2 IMG reference gene:2512953760; PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: O-succinylhomoserine sulfhydrylase; truncated by 11 aa YP_351902.1 IMG reference gene:2512953761; PFAM: Uncharacterized ACR, COG1469 YP_351903.1 IMG reference gene:2512953762; PFAM: Cation transport protein YP_351904.1 IMG reference gene:2512953763; PFAM: Cation transport protein YP_351905.1 IMG reference gene:2512953764; PFAM: Putative peptidoglycan binding domain; Sporulation related domain YP_351906.1 IMG reference gene:2512953765; PFAM: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, alpha subunit YP_351907.1 IMG reference gene:2512953766 YP_351908.1 IMG reference gene:2512953767; PFAM: Glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit YP_351909.1 IMG reference gene:2512953768; PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: pyruvate, phosphate dikinase YP_351910.1 IMG reference gene:2512953769; PFAM: Cell Wall Hydrolase YP_351911.1 IMG reference gene:2512953770; PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain YP_351912.1 IMG reference gene:2512953771; PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase YP_351913.1 IMG reference gene:2512953772; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase YP_351914.1 IMG reference gene:2512953773 YP_351915.1 IMG reference gene:2512953774; PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase YP_351916.1 IMG reference gene:2512953775; PFAM: AsnC family YP_351917.1 IMG reference gene:2512953776; PFAM: AsnC family YP_351918.1 IMG reference gene:2512953777; PFAM: Aminotransferase class-V YP_351919.1 IMG reference gene:2512953778; PFAM: FAD binding domain; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family YP_351920.1 IMG reference gene:2512953779 YP_351921.1 IMG reference gene:2512953780; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; pyrimidine 5'-nucleotidase YP_351922.1 IMG reference gene:2512953781; PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_351923.1 IMG reference gene:2512953782; PFAM: GSPII_E N-terminal domain; Glycosyl transferase family 2 YP_351924.2 IMG reference gene:2512953783; PFAM: L,D-transpeptidase catalytic domain YP_351925.2 IMG reference gene:2512953784; PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit YP_351926.1 IMG reference gene:2512953785; PFAM: Yqey-like protein YP_351927.1 IMG reference gene:2512953786; PFAM: Integral membrane protein (DUF2244) YP_351928.1 IMG reference gene:2512953787; PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, subunit I YP_351929.1 IMG reference gene:2512953788; PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoate-protein ligase B YP_351930.1 IMG reference gene:2512953789; PFAM: Putative peptidoglycan binding domain YP_351931.1 IMG reference gene:2512953791; PFAM: ABC transporter; TOBE domain; TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit YP_351932.2 IMG reference gene:2512953792; PFAM: Bacterial extracellular solute-binding protein YP_351933.1 IMG reference gene:2512953793; PFAM: Binding-protein-dependent transport system inner membrane component YP_351934.1 IMG reference gene:2512953794; PFAM: Binding-protein-dependent transport system inner membrane component YP_351935.1 IMG reference gene:2512953795; PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type YP_351936.1 IMG reference gene:2512953796; PFAM: Acetyltransferase (GNAT) family YP_351937.1 IMG reference gene:2512953797; PFAM: Uncharacterised protein family UPF0005 YP_351938.1 IMG reference gene:2512953798; PFAM: Domain of unknown function (DUF1127) YP_351939.2 IMG reference gene:2512953799; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; truncated 11 aa YP_351940.1 IMG reference gene:2512953800; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_351941.1 IMG reference gene:2512953801; PFAM: Helix-turn-helix YP_351942.1 IMG reference gene:2512953802; PFAM: Inositol monophosphatase family; TIGRFAM: histidinol-phosphate phosphatase HisN, inositol monophosphatase family YP_351943.2 IMG reference gene:2512953803; PFAM: Cell Wall Hydrolase; extended by 40 YP_351944.1 IMG reference gene:2512953804; PFAM: Mechanosensitive ion channel YP_351945.2 IMG reference gene:2512953805; PFAM: Amidohydrolase family; TIGRFAM: guanine deaminase; truncated by 5 aa YP_351946.2 IMG reference gene:2512953806; PFAM: MgtE intracellular N domain; CBS domain; Divalent cation transporter; TIGRFAM: Mg2+ transporter (mgtE); extended by 15 YP_351947.1 IMG reference gene:2512953807; PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase YP_351948.1 IMG reference gene:2512953808 YP_351949.1 IMG reference gene:2512953809; PFAM: Type IV leader peptidase family YP_351950.1 IMG reference gene:2512953810 YP_351951.1 IMG reference gene:2512953811; PFAM: Tetratricopeptide repeat YP_351952.1 IMG reference gene:2512953812; PFAM: Bacterial type II secretion system protein F domain YP_351953.1 IMG reference gene:2512953813; PFAM: Bacterial type II secretion system protein F domain YP_351954.1 IMG reference gene:2512953814; PFAM: Type II/IV secretion system protein YP_351955.1 IMG reference gene:2512953815; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_351956.1 IMG reference gene:2512953816; PFAM: OmpA family YP_351957.1 IMG reference gene:2512953817; PFAM: Putative phospholipid-binding domain; Bacterial type II and III secretion system protein YP_351958.1 IMG reference gene:2512953818; TIGRFAM: Flp pilus assembly protein CpaB YP_351959.1 IMG reference gene:2512953819 YP_351960.2 IMG reference gene:2512953820; truncated by 29 aa YP_351961.1 IMG reference gene:2512953821; PFAM: Transglycosylase SLT domain YP_351962.2 IMG reference gene:2512953822; PFAM: Acetyltransferase (GNAT) family; extended by 17 aa YP_351963.1 IMG reference gene:2512953823; PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit YP_351964.1 IMG reference gene:2512953824; PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit YP_351965.1 IMG reference gene:2512953826; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_351966.1 IMG reference gene:2512953827; PFAM: Acetyltransferase (GNAT) family YP_351967.1 IMG reference gene:2512953828; PFAM: DSBA-like thioredoxin domain YP_351968.1 IMG reference gene:2512953829; PFAM: Cupin domain YP_351969.1 IMG reference gene:2512953830 YP_351970.1 IMG reference gene:2512953831 YP_351971.2 IMG reference gene:2512953832; PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: pyridoxal kinase; extended by 17 aa YP_351972.1 IMG reference gene:2512953833; PFAM: MOSC domain; 3-alpha domain YP_008686489.1 IMG reference gene:2512953834; new gene YP_351973.1 IMG reference gene:2512953835; PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family YP_351974.1 IMG reference gene:2512953836; PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthase YP_351975.2 IMG reference gene:2512953837; PFAM: BioY family; extended by 40 aa YP_351976.1 IMG reference gene:2512953838; PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_351977.1 IMG reference gene:2512953839; PFAM: Dihydrouridine synthase (Dus); TIGRFAM: tRNA dihydrouridine synthase A YP_351978.1 IMG reference gene:2512953840; PFAM: Sulfite exporter TauE/SafE YP_351979.1 IMG reference gene:2512953841; PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase YP_351980.1 IMG reference gene:2512953842; PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase YP_351981.1 IMG reference gene:2512953843; PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, homodimeric type YP_351982.1 IMG reference gene:2512953844; PFAM: AAA domain (dynein-related subfamily) YP_351983.1 IMG reference gene:2512953845; PFAM: VWA domain containing CoxE-like protein YP_351984.1 IMG reference gene:2512953846 YP_351985.1 IMG reference gene:2512953847; PFAM: OmpA family YP_351986.2 IMG reference gene:2512953848; PFAM: XdhC and CoxI family; frameshift eliminated; joint gene, RSP_1934, RSP_1935 YP_351988.1 IMG reference gene:2512953849 YP_351989.2 IMG reference gene:2512953850; PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3; non-canonical start codon; truncated by 13 aa YP_351990.2 IMG reference gene:2512953851; truncated by 17 aa YP_351991.1 IMG reference gene:2512953852; PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain YP_351992.1 IMG reference gene:2512953853; PFAM: Bacterial protein of unknown function (DUF934) YP_351993.2 IMG reference gene:2512953854; PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: phosophoadenylyl-sulfate reductase (thioredoxin); extended by 13 aa YP_351994.1 IMG reference gene:2512953855; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain YP_351995.1 IMG reference gene:2512953856; PFAM: Protein of unknown function (DUF2849) YP_351996.1 IMG reference gene:2512953857; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase YP_351997.1 IMG reference gene:2512953858; PFAM: HTH domain; AsnC family YP_351998.1 IMG reference gene:2512953859; PFAM: Cytochrome P450 YP_351999.1 IMG reference gene:2512953860; PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase YP_352000.1 IMG reference gene:2512953861; PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein YP_352001.1 IMG reference gene:2512953862; PFAM: Domain of unknown function DUF59; TIGRFAM: FeS assembly SUF system protein YP_352002.1 IMG reference gene:2512953863 YP_352003.1 IMG reference gene:2512953864; PFAM: Protein of unknown function (DUF982) YP_352004.2 IMG reference gene:2512953865; PFAM: 'Cold-shock' DNA-binding domain; truncated by 9 aa YP_352005.1 IMG reference gene:2512953866; PFAM: Cyclic nucleotide-binding domain YP_352006.1 IMG reference gene:2512953867 YP_352007.2 IMG reference gene:2512953868; extended by 20 aa YP_352008.2 IMG reference gene:2512953869; extended by 121 aa YP_008686490.1 IMG reference gene:2512953870; new gene; replaced RSP_1957 on the opposite strand YP_352010.2 IMG reference gene:2512953874; truncated by 46 aa YP_352011.1 IMG reference gene:2512953875; PFAM: Bacterial transcription activator, effector binding domain YP_352012.1 IMG reference gene:2512953876 YP_008686491.1 IMG reference gene:2512953877; new gene; replaced RSP_1964 on the opposite strand YP_352014.1 IMG reference gene:2512953878; PFAM: HlyD family secretion protein YP_352015.1 IMG reference gene:2512953879; PFAM: HNH endonuclease YP_352016.2 IMG reference gene:2512953880; PFAM: Integrase core domain; truncated by 6 aa YP_352017.1 IMG reference gene:2512953881; PFAM: Phage integrase family YP_352018.1 IMG reference gene:2512953883; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase YP_352019.2 IMG reference gene:2512953884; PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent; extended by 14 aa YP_352020.1 IMG reference gene:2512953885; PFAM: 3'-5' exonuclease; HRDC domain; TIGRFAM: ribonuclease D YP_352021.1 IMG reference gene:2512953886 YP_352022.1 IMG reference gene:2512953887; PFAM: Fe-S metabolism associated domain YP_352023.1 IMG reference gene:2512953888; PFAM: Domain of unknown function (DUF427) YP_352024.1 IMG reference gene:2512953889; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain YP_352025.1 IMG reference gene:2512953890; PFAM: Cobalamin biosynthesis protein CobT VWA domain; Cobalamin biosynthesis protein CobT; TIGRFAM: cobaltochelatase, CobT subunit YP_352026.1 IMG reference gene:2512953891 YP_352027.1 IMG reference gene:2512953892 YP_352028.2 IMG reference gene:2512953893; PFAM: AAA domain (dynein-related subfamily); Cobaltochelatase CobS subunit N terminal; TIGRFAM: cobaltochelatase, CobS subunit; truncated by 20 aa YP_352029.1 IMG reference gene:2512953894; PFAM: DnaJ domain YP_352030.1 IMG reference gene:2512953895; PFAM: BolA-like protein YP_352031.2 IMG reference gene:2512953896; PFAM: Malate synthase; TIGRFAM: malate synthase G; truncated by 19 aa YP_352033.1 IMG reference gene:2512953898; PFAM: Domain of unknown function (DUF3458); Peptidase family M1; TIGRFAM: aminopeptidase N, Escherichia coli type YP_352034.1 IMG reference gene:2512953899; PFAM: Acyltransferase YP_352035.2 IMG reference gene:2512953900; PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; truncated by 14 aa YP_352036.1 IMG reference gene:2512953901 YP_352037.1 IMG reference gene:2512953902; PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit YP_352038.1 IMG reference gene:2512953903; PFAM: Transglycosylase SLT domain YP_352039.1 IMG reference gene:2512953904; PFAM: Domain of unknown function (DUF1992) YP_352040.1 IMG reference gene:2512953905; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase YP_352041.1 IMG reference gene:2512953906; PFAM: AsnC family YP_352042.1 IMG reference gene:2512953907; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain YP_352043.2 IMG reference gene:2512953908; PFAM: Uncharacterized conserved protein (DUF2235); truncated by 26 aa YP_352044.1 IMG reference gene:2512953909; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1 YP_352045.1 IMG reference gene:2512953910; PFAM: Citrate synthase; TIGRFAM: citrate synthase I (hexameric type) YP_352046.1 IMG reference gene:2512953911; PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family YP_352047.2 IMG reference gene:2512953912; PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein; extended by 19 aa YP_352048.1 IMG reference gene:2512953913; PFAM: LexA DNA binding domain; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA YP_352049.1 IMG reference gene:2512953914; PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain YP_352050.1 IMG reference gene:2512953915; PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC YP_352051.1 IMG reference gene:2512953916; PFAM: Indole-3-glycerol phosphate synthase YP_352052.1 IMG reference gene:2512953917; PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase YP_352053.1 IMG reference gene:2512953918; PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase YP_352054.1 IMG reference gene:2512953919; PFAM: Divergent polysaccharide deacetylase YP_352055.1 IMG reference gene:2512953920; PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: anthranilate synthase component I, non-proteobacterial lineages YP_352056.1 IMG reference gene:2512953921 YP_352057.1 IMG reference gene:2512953922; PFAM: AsmA family YP_352058.1 IMG reference gene:2512953923; PFAM: GcrA cell cycle regulator YP_352059.1 IMG reference gene:2512953924; PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine transaminases YP_352060.1 IMG reference gene:2512953925; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase YP_352061.1 IMG reference gene:2512953926 YP_352062.1 IMG reference gene:2512953927; PFAM: Transcription elongation factor, GreA/GreB, C-term YP_352063.2 IMG reference gene:2512953928; PFAM: NUDIX domain; truncated by 12 aa YP_352064.1 IMG reference gene:2512953929; PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); ATP-dependent helicase C-terminal; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpB YP_352065.1 IMG reference gene:2512953930; PFAM: Protein of unknown function (DUF3108) YP_352066.1 IMG reference gene:2512953931; PFAM: ArgK protein; TIGRFAM: LAO/AO transport system ATPase YP_352067.1 IMG reference gene:2512953932; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28 YP_352068.2 IMG reference gene:2512953933; extended by 12 aa YP_352069.1 IMG reference gene:2512953934; PFAM: Protein of unknown function (DUF461) YP_352070.1 IMG reference gene:2512953935 YP_352071.1 IMG reference gene:2512953936; PFAM: Protein of unknown function (DUF3478) YP_008686492.1 IMG reference gene:2512953937; new gene YP_352072.1 IMG reference gene:2512953938; PFAM: Dihaem cytochrome c YP_352073.1 IMG reference gene:2512953939; PFAM: Domain of unknown function (DUF1924) YP_352074.1 IMG reference gene:2512953940; PFAM: Cytochrome b(N-terminal)/b6/petB; Dihaem cytochrome c YP_008686493.1 IMG reference gene:2512953941; new gene; replaced RSP_2023 on the opposite strand YP_352076.1 IMG reference gene:2512953942; PFAM: 'Cold-shock' DNA-binding domain YP_352077.1 IMG reference gene:2512953943 YP_352078.1 IMG reference gene:2512953944 YP_352079.2 IMG reference gene:2512953945; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_352080.1 IMG reference gene:2512953946 YP_352081.1 IMG reference gene:2512953947; PFAM: short chain dehydrogenase YP_352082.2 IMG reference gene:2512953948; PFAM: HWE histidine kinase; extended by 43 aa YP_352083.1 IMG reference gene:2512953949 YP_352084.1 IMG reference gene:2512953950 YP_352085.1 IMG reference gene:2512953951; PFAM: CAAX amino terminal protease family YP_352086.1 IMG reference gene:2512953952 YP_352087.2 IMG reference gene:2512953953; truncated by 9 aa YP_352089.2 IMG reference gene:2512953955; truncated by 11 aa YP_352090.1 IMG reference gene:2512953956; PFAM: Acetyltransferase (GNAT) family YP_352091.1 IMG reference gene:2512953957; PFAM: short chain dehydrogenase YP_352093.1 IMG reference gene:2512953959 YP_352096.2 IMG reference gene:2512953960; extended by 19 aa YP_352097.1 IMG reference gene:2512953961 YP_352098.1 IMG reference gene:2512953962 YP_352099.1 IMG reference gene:2512953963; PFAM: ThiF family YP_352100.1 IMG reference gene:2512953964; PFAM: Mov34/MPN/PAD-1 family YP_352101.1 IMG reference gene:2512953965 YP_352102.1 IMG reference gene:2512953966 YP_352103.1 IMG reference gene:2512953967; PFAM: D12 class N6 adenine-specific DNA methyltransferase YP_352104.1 IMG reference gene:2512953968; PFAM: EamA-like transporter family YP_352105.1 IMG reference gene:2512953969 YP_352106.1 IMG reference gene:2512953970 YP_352107.1 IMG reference gene:2512953971 YP_352108.1 IMG reference gene:2512953972 YP_352109.1 IMG reference gene:2512953973 YP_352110.1 IMG reference gene:2512953974 YP_352111.2 IMG reference gene:2512953975; extended by 20 aa; non-canonical start codon YP_352112.1 IMG reference gene:2512953976 YP_352113.1 IMG reference gene:2512953977 YP_352114.1 IMG reference gene:2512953978; PFAM: Protein of unknown function (DUF3168) YP_352115.1 IMG reference gene:2512953979; PFAM: Bacteriophage protein of unknown function (DUF646) YP_352116.1 IMG reference gene:2512953980; PFAM: Phage head-tail joining protein; TIGRFAM: phage head-tail adaptor, putative, SPP1 family YP_352117.1 IMG reference gene:2512953981 YP_352118.1 IMG reference gene:2512953982 YP_352119.1 IMG reference gene:2512953983; PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family YP_352120.1 IMG reference gene:2512953984; PFAM: Clp protease YP_352121.1 IMG reference gene:2512953985; PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family YP_352122.1 IMG reference gene:2512953986; PFAM: Phage Terminase YP_352123.1 IMG reference gene:2512953987 YP_352124.1 IMG reference gene:2512953988; PFAM: HNH endonuclease YP_352125.1 IMG reference gene:2512953989 YP_352126.2 IMG reference gene:2512953990 YP_352127.2 IMG reference gene:2512953991; truncated by 11 aa YP_352128.2 IMG reference gene:2512953992; PFAM: Domain of unknown function (DUF1937); truncated by 28 aa YP_008686494.1 IMG reference gene:2512953993; new gene YP_352129.1 IMG reference gene:2512953994 YP_352130.1 IMG reference gene:2512953995; PFAM: Helix-turn-helix YP_008686495.1 IMG reference gene:2512953996; new gene YP_352132.1 IMG reference gene:2512953997 YP_352133.2 IMG reference gene:2512953998; PFAM: Uncharacterized protein conserved in bacteria (DUF2312) YP_352134.1 IMG reference gene:2512953999; PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins YP_008686496.1 IMG reference gene:2512954000; new gene YP_352135.1 IMG reference gene:2512954001 YP_352136.1 IMG reference gene:2512954002; PFAM: Phage integrase family YP_352137.1 IMG reference gene:2512954004; PFAM: Acetyltransferase (GNAT) family YP_352138.1 IMG reference gene:2512954005; PFAM: ETC complex I subunit conserved region YP_352139.1 IMG reference gene:2512954006; PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit YP_352140.1 IMG reference gene:2512954007 YP_352141.1 IMG reference gene:2512954008 YP_352142.1 IMG reference gene:2512954009; PFAM: Antibiotic biosynthesis monooxygenase YP_352143.1 IMG reference gene:2512954010 YP_352144.1 IMG reference gene:2512954011; PFAM: Entericidin EcnA/B family YP_352145.2 IMG reference gene:2512954012; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain YP_352146.1 IMG reference gene:2512954014; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; HMGL-like; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme; Conserved carboxylase domain; TIGRFAM: pyruvate carboxylase YP_352147.1 IMG reference gene:2512954015; PFAM: UvrD/REP helicase YP_352148.1 IMG reference gene:2512954016; PFAM: Benzoate membrane transport protein; TIGRFAM: benzoate transporter YP_352149.1 IMG reference gene:2512954017; PFAM: Domain of unknown function (DUF1127) YP_352150.1 IMG reference gene:2512954018; PFAM: ParA/MinD ATPase like; Anion-transporting ATPase YP_352151.1 IMG reference gene:2512954019; PFAM: MraZ protein; TIGRFAM: mraZ protein YP_352152.1 IMG reference gene:2512954020; PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW YP_352153.1 IMG reference gene:2512954021 YP_352154.1 IMG reference gene:2512954022; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain YP_352155.1 IMG reference gene:2512954023; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase YP_352156.1 IMG reference gene:2512954024; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase YP_352157.1 IMG reference gene:2512954025; PFAM: Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1; Glycosyl transferase family 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase YP_352158.1 IMG reference gene:2512954026; PFAM: Putative phospholipid-binding domain YP_352159.1 IMG reference gene:2512954027; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_352160.1 IMG reference gene:2512954028; PFAM: Glutathione-dependent formaldehyde-activating enzyme YP_352161.2 IMG reference gene:2512954029; PFAM: Activator of Hsp90 ATPase homolog 1-like protein; truncated by 12 aa YP_352162.1 IMG reference gene:2512954030; PFAM: Cell cycle protein; TIGRFAM: cell division protein FtsW YP_352163.1 IMG reference gene:2512954031; PFAM: Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase YP_352164.1 IMG reference gene:2512954032; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase YP_352165.1 IMG reference gene:2512954033; PFAM: Protein of unknown function (DUF2484) YP_352166.1 IMG reference gene:2512954034; PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase YP_352167.1 IMG reference gene:2512954035; PFAM: D-ala D-ala ligase N-terminus; D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase YP_352168.1 IMG reference gene:2512954036; PFAM: Cell division protein FtsQ; POTRA domain, FtsQ-type YP_352169.1 IMG reference gene:2512954037; PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA YP_352170.1 IMG reference gene:2512954038; PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ YP_352171.1 IMG reference gene:2512954039; PFAM: UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase YP_352172.1 IMG reference gene:2512954040; TIGRFAM: outer membrane assembly lipoprotein YfiO YP_352173.1 IMG reference gene:2512954041; PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN YP_352174.1 IMG reference gene:2512954042; TIGRFAM: conserved hypothetical protein YP_352175.1 IMG reference gene:2512954043; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD YP_352176.1 IMG reference gene:2512954044; PFAM: Protein of unknown function (DUF1638) YP_008686497.1 IMG reference gene:2512954045; new gene YP_352177.1 IMG reference gene:2512954046; PFAM: B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain YP_352178.1 IMG reference gene:2512954047; PFAM: Radical SAM superfamily YP_352179.1 IMG reference gene:2512954048; PFAM: Homocysteine S-methyltransferase YP_352180.1 IMG reference gene:2512954049; PFAM: Domain of unknown function (DUF1476) YP_352181.1 IMG reference gene:2512954050; PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase YP_352182.1 IMG reference gene:2512954051; PFAM: Phosphoribosylformylglycinamidine (FGAM) synthase; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS protein YP_352183.1 IMG reference gene:2512954052; PFAM: CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: phosphoribosylformylglycinamidine synthase I YP_352184.1 IMG reference gene:2512954053; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_352185.1 IMG reference gene:2512954054; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_352186.1 IMG reference gene:2512954055; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family YP_352187.1 IMG reference gene:2512954056; PFAM: SirA-like protein YP_352188.1 IMG reference gene:2512954057; PFAM: Cytochrome C biogenesis protein transmembrane region YP_352189.1 IMG reference gene:2512954058 YP_352190.1 IMG reference gene:2512954059 YP_352191.1 IMG reference gene:2512954060 YP_352192.1 IMG reference gene:2512954061; PFAM: Lyase; Fumarase C C-terminus; TIGRFAM: fumarate hydratase, class II YP_352193.1 IMG reference gene:2512954062; PFAM: Stringent starvation protein B YP_352194.1 IMG reference gene:2512954063; PFAM: Protein of unknown function (DUF1194) YP_352195.1 IMG reference gene:2512954065; PFAM: Bacterial extracellular solute-binding protein YP_352196.1 IMG reference gene:2512954066; PFAM: Aminotransferase class-V YP_352197.2 IMG reference gene:2512954067; PFAM: FAD binding domain of DNA photolyase; DNA photolyase YP_352198.1 IMG reference gene:2512954068; PFAM: Mycolic acid cyclopropane synthetase YP_352199.1 IMG reference gene:2512954069 YP_352200.2 IMG reference gene:2512954070; PFAM: NUDIX domain; TIGRFAM: nudix-type nucleoside diphosphatase, YffH/AdpP family YP_352201.1 IMG reference gene:2512954071; PFAM: Pyridoxal-phosphate dependent enzyme YP_352202.1 IMG reference gene:2512954072; PFAM: Mechanosensitive ion channel; Protein of unknown function (DUF3772) YP_352203.1 IMG reference gene:2512954073; PFAM: Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A) YP_352204.1 IMG reference gene:2512954074; PFAM: Glycosyl transferase family 2 YP_352205.1 IMG reference gene:2512954075; PFAM: SNARE associated Golgi protein YP_352206.2 IMG reference gene:2512954076 YP_352207.1 IMG reference gene:2512954077 YP_352208.1 IMG reference gene:2512954078 YP_352209.1 IMG reference gene:2512954079; PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase YP_352210.1 IMG reference gene:2512954080; PFAM: Binding-protein-dependent transport system inner membrane component YP_352211.1 IMG reference gene:2512954081; PFAM: Binding-protein-dependent transport system inner membrane component YP_352212.1 IMG reference gene:2512954082 YP_352213.1 IMG reference gene:2512954083; PFAM: ABC transporter; TOBE domain YP_352214.1 IMG reference gene:2512954084; PFAM: short chain dehydrogenase YP_352215.1 IMG reference gene:2512954085; PFAM: PAP2 superfamily YP_352216.1 IMG reference gene:2512954086; TIGRFAM: lytic murein transglycosylase YP_352217.1 IMG reference gene:2512954088; PFAM: AsnC family YP_352218.1 IMG reference gene:2512954089; PFAM: Proline dehydrogenase; Aldehyde dehydrogenase family; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) YP_352219.1 IMG reference gene:2512954090; PFAM: Rhomboid family YP_352220.1 IMG reference gene:2512954091; PFAM: Glutathione-dependent formaldehyde-activating enzyme YP_352221.1 IMG reference gene:2512954092; PFAM: Inositol monophosphatase family YP_352222.1 IMG reference gene:2512954093; PFAM: Phosphate transporter family YP_352223.1 IMG reference gene:2512954094; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_352224.1 IMG reference gene:2512954095; PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form YP_352225.1 IMG reference gene:2512954096; PFAM: BioY family YP_352226.1 IMG reference gene:2512954097; PFAM: Cobalt transport protein YP_352227.1 IMG reference gene:2512954098; PFAM: ABC transporter YP_352230.1 IMG reference gene:2512954100; PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA YP_352231.1 IMG reference gene:2512954101; PFAM: Toprim domain; Topoisomerase DNA binding C4 zinc finger; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial YP_352232.1 IMG reference gene:2512954102; PFAM: ABC transporter; TIGRFAM: choline ABC transporter, ATP-binding protein YP_352233.1 IMG reference gene:2512954103; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: choline ABC transporter, permease protein YP_352234.1 IMG reference gene:2512954104; PFAM: Substrate binding domain of ABC-type glycine betaine transport system; TIGRFAM: choline ABC transporter, periplasmic binding protein YP_352235.1 IMG reference gene:2512954105; PFAM: Bacterial regulatory proteins, tetR family; TIGRFAM: transcriptional repressor BetI YP_352236.1 IMG reference gene:2512954106; PFAM: Aldehyde dehydrogenase family; TIGRFAM: glycine betaine aldehyde dehydrogenase YP_352237.1 IMG reference gene:2512954107; PFAM: GMC oxidoreductase; TIGRFAM: choline dehydrogenase YP_352238.2 IMG reference gene:2512954108; PFAM: Staphylococcal nuclease homologue; truncated by 12 aa YP_352239.1 IMG reference gene:2512954110; PFAM: Helix-turn-helix; Predicted transcriptional regulator (DUF2083); Domain of unknown function (DUF955) YP_352240.1 IMG reference gene:2512954111; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily YP_352241.1 IMG reference gene:2512954112; PFAM: Protein of unknown function, DUF486 YP_352242.1 IMG reference gene:2512954113; PFAM: Carboxyl transferase domain YP_352243.1 IMG reference gene:2512954114 YP_008686498.1 IMG reference gene:2512954115; new gene YP_352244.2 IMG reference gene:2512954116 YP_352245.1 IMG reference gene:2512954117 YP_352246.2 IMG reference gene:2512954118; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit; truncated by 29 aa YP_352247.1 IMG reference gene:2512954119 YP_352248.1 IMG reference gene:2512954120; PFAM: Methylmalonyl-CoA mutase; B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; methylmalonyl-CoA mutase C-terminal domain YP_352249.1 IMG reference gene:2512954121; PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: glycine cleavage system T protein YP_352250.1 IMG reference gene:2512954122; PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein YP_352251.1 IMG reference gene:2512954123; PFAM: Glycine cleavage system P-protein; TIGRFAM: glycine dehydrogenase (decarboxylating) YP_352252.1 IMG reference gene:2512954124; PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_352253.1 IMG reference gene:2512954125; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_352254.1 IMG reference gene:2512954126; PFAM: Glutathione-dependent formaldehyde-activating enzyme YP_352255.1 IMG reference gene:2512954127; PFAM: Acyl-CoA dehydrogenase N terminal; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_352256.2 IMG reference gene:2512954128; PFAM: MerR family regulatory protein; MerR, DNA binding YP_352257.1 IMG reference gene:2512954129; PFAM: MerR family regulatory protein; MerR, DNA binding YP_352258.1 IMG reference gene:2512954130; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1 YP_352259.1 IMG reference gene:2512954131; PFAM: Thioesterase superfamily YP_352260.1 IMG reference gene:2512954132; PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_352261.1 IMG reference gene:2512954133; PFAM: Putative transmembrane protein (Alph_Pro_TM); TIGRFAM: conserved hypothetical protein YP_352262.1 IMG reference gene:2512954134; PFAM: Sulfite exporter TauE/SafE YP_352263.1 IMG reference gene:2512954135; PFAM: Phosphorylase superfamily; TIGRFAM: inosine/guanosine/xanthosine phosphorylase family; purine nucleotide phosphorylase YP_352264.1 IMG reference gene:2512954136; PFAM: Branched-chain amino acid transport system / permease component YP_352265.1 IMG reference gene:2512954137; PFAM: Branched-chain amino acid transport system / permease component YP_352266.1 IMG reference gene:2512954138; PFAM: ABC transporter YP_352267.1 IMG reference gene:2512954139; PFAM: Basic membrane protein YP_352268.1 IMG reference gene:2512954140; PFAM: Acetyltransferase (GNAT) family YP_352269.1 IMG reference gene:2512954141; PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ YP_352270.1 IMG reference gene:2512954142; PFAM: Scaffold protein Nfu/NifU N terminal; NifU-like domain YP_352272.1 IMG reference gene:2512954144; PFAM: Aminotransferase class IV YP_352273.1 IMG reference gene:2512954145; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_352274.1 IMG reference gene:2512954146; PFAM: L,D-transpeptidase catalytic domain YP_352275.1 IMG reference gene:2512954147; PFAM: Bacterial lipid A biosynthesis acyltransferase YP_352276.1 IMG reference gene:2512954148; PFAM: FliG C-terminal domain YP_352277.1 IMG reference gene:2512954149 YP_352278.1 IMG reference gene:2512954150; PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase YP_352279.2 IMG reference gene:2512954151; PFAM: Domain of unknown function (DUF333); truncated by 20 aa YP_352280.1 IMG reference gene:2512954152; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family YP_352281.1 IMG reference gene:2512954153; TIGRFAM: RND family efflux transporter, MFP subunit YP_352282.1 IMG reference gene:2512954154 YP_352283.1 IMG reference gene:2512954155; PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: glycogen debranching enzyme GlgX YP_352284.1 IMG reference gene:2512954156; PFAM: Nucleotidyl transferase YP_352286.1 IMG reference gene:2512954158; PFAM: CheB methylesterase; HWE histidine kinase; CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain; PAS fold; TIGRFAM: PAS domain S-box YP_352287.2 IMG reference gene:2512954159; PFAM: Response regulator receiver domain; extended by 13 aa YP_008686499.1 IMG reference gene:2512954160; new gene YP_352288.1 IMG reference gene:2512954161 YP_352289.2 IMG reference gene:2512954162; PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: probable DNA metabolism protein; uracil-DNA glycosylase family domain; uracil-DNA glycosylase, family 4; extended by 11 aa YP_352290.1 IMG reference gene:2512954163; TIGRFAM: putative DNA modification/repair radical SAM protein YP_352291.2 IMG reference gene:2512954164; PFAM: Beta-lactamase YP_352292.1 IMG reference gene:2512954165 YP_352293.1 IMG reference gene:2512954166; PFAM: HlyD family secretion protein YP_352294.1 IMG reference gene:2512954167; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; Multidrug resistance protein YP_352295.1 IMG reference gene:2512954169; PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3 YP_352296.1 IMG reference gene:2512954170 YP_352297.1 IMG reference gene:2512954171; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase YP_352298.1 IMG reference gene:2512954172; PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit YP_352299.1 IMG reference gene:2512954173; PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_352300.1 IMG reference gene:2512954174; PFAM: Uncharacterized protein conserved in bacteria (DUF2147) YP_352301.1 IMG reference gene:2512954175; PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_352302.1 IMG reference gene:2512954176; PFAM: Imidazoleglycerol-phosphate dehydratase YP_352303.2 IMG reference gene:2512954177; PFAM: Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G YP_352304.1 IMG reference gene:2512954178; PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein YP_352305.1 IMG reference gene:2512954179 YP_352306.1 IMG reference gene:2512954180; TIGRFAM: 3-oxoadipate enol-lactonase YP_352307.1 IMG reference gene:2512954181; PFAM: Pyridoxal-phosphate dependent enzyme YP_352308.1 IMG reference gene:2512954182 YP_352309.1 IMG reference gene:2512954183; PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: ABC transporter, permease/ATP-binding protein YP_352310.1 IMG reference gene:2512954184; PFAM: AMP-binding enzyme YP_352311.1 IMG reference gene:2512954185; PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_352312.1 IMG reference gene:2512954186; PFAM: pfkB family carbohydrate kinase YP_352313.1 IMG reference gene:2512954187; PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase YP_352314.1 IMG reference gene:2512954188; PFAM: SNARE associated Golgi protein YP_352315.1 IMG reference gene:2512954189 YP_352316.1 IMG reference gene:2512954190; PFAM: SPFH domain / Band 7 family YP_008686500.1 IMG reference gene:2512954191; new gene YP_352317.1 IMG reference gene:2512954192 YP_352318.1 IMG reference gene:2512954193; PFAM: Protein of unknown function (DUF2927) YP_352319.1 IMG reference gene:2512954194; PFAM: Toxic anion resistance protein (TelA) YP_352320.1 IMG reference gene:2512954195; PFAM: 5-bromo-4-chloroindolyl phosphate hydrolysis protein YP_008686501.1 IMG reference gene:2512954196; new gene YP_352321.1 IMG reference gene:2512954197; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase YP_352322.1 IMG reference gene:2512954198; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_352323.1 IMG reference gene:2512954199 YP_352324.2 IMG reference gene:2512954200 YP_352325.1 IMG reference gene:2512954201; PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit YP_352326.1 IMG reference gene:2512954202; PFAM: Amidase; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit YP_352327.2 IMG reference gene:2512954203; truncated by 30 aa YP_352328.1 IMG reference gene:2512954204; PFAM: N-acetylmuramoyl-L-alanine amidase YP_352329.2 IMG reference gene:2512954206 YP_352330.1 IMG reference gene:2512954207; PFAM: ABC transporter YP_352331.1 IMG reference gene:2512954208 YP_352332.1 IMG reference gene:2512954209; PFAM: Branched-chain amino acid transport system / permease component YP_352333.1 IMG reference gene:2512954210; PFAM: Branched-chain amino acid transport system / permease component YP_008686502.1 IMG reference gene:2512954211; new gene YP_352334.1 IMG reference gene:2512954212; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter YP_352335.1 IMG reference gene:2512954213; PFAM: AMP-binding enzyme YP_352336.1 IMG reference gene:2512954214; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold YP_352337.1 IMG reference gene:2512954215; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_352338.1 IMG reference gene:2512954216; PFAM: Chromate transporter; TIGRFAM: chromate transporter, chromate ion transporter (CHR) family YP_352339.1 IMG reference gene:2512954217; PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type YP_352340.1 IMG reference gene:2512954218; PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase YP_352341.1 IMG reference gene:2512954219; PFAM: Prephenate dehydrogenase YP_352342.1 IMG reference gene:2512954220; PFAM: Extensin-like protein C-terminus YP_352343.1 IMG reference gene:2512954221; PFAM: Uncharacterized protein conserved in bacteria (DUF2125) YP_352344.1 IMG reference gene:2512954222; PFAM: ChaC-like protein YP_352345.1 IMG reference gene:2512954223 YP_352346.2 IMG reference gene:2512954224; PFAM: OmpA family YP_352347.1 IMG reference gene:2512954225; PFAM: Transposase YP_352348.1 IMG reference gene:2512954227; PFAM: ATPase family associated with various cellular activities (AAA); Clp amino terminal domain; AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA YP_352349.1 IMG reference gene:2512954228; PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: hydroxyacylglutathione hydrolase YP_352350.1 IMG reference gene:2512954229 YP_352351.1 IMG reference gene:2512954230; PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit YP_352352.1 IMG reference gene:2512954231; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit YP_352353.1 IMG reference gene:2512954232; PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit YP_352354.1 IMG reference gene:2512954233; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase, F1 beta subunit YP_352355.1 IMG reference gene:2512954234; PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria) YP_352356.1 IMG reference gene:2512954235; PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase YP_352357.1 IMG reference gene:2512954236; PFAM: Beta-eliminating lyase YP_352358.1 IMG reference gene:2512954237; PFAM: Uncharacterised protein family (UPF0153) YP_352359.1 IMG reference gene:2512954238; PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase YP_352360.1 IMG reference gene:2512954239; PFAM: MaoC like domain YP_352361.1 IMG reference gene:2512954240; TIGRFAM: Haloacid Dehalogenase Superfamily Class (subfamily) IIA; HAD-superfamily class IIA hydrolase, TIGR01459 YP_352362.1 IMG reference gene:2512954241; PFAM: DHH family; DHHA2 domain YP_352364.2 IMG reference gene:2512954243; PFAM: TraB family; truncated by 33 aa YP_352365.1 IMG reference gene:2512954244; PFAM: Chaperonin 10 Kd subunit YP_352366.1 IMG reference gene:2512954245; PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL YP_352367.1 IMG reference gene:2512954246; PFAM: Bacterial SH3 domain YP_352368.1 IMG reference gene:2512954247; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_352369.1 IMG reference gene:2512954248; PFAM: Aldo/keto reductase family YP_352370.1 IMG reference gene:2512954249 YP_352371.1 IMG reference gene:2512954250; PFAM: FAD dependent oxidoreductase YP_352372.1 IMG reference gene:2512954251; PFAM: Iron-containing alcohol dehydrogenase YP_352373.1 IMG reference gene:2512954252; PFAM: Aldehyde dehydrogenase family YP_352374.1 IMG reference gene:2512954253; PFAM: Glutamine synthetase, catalytic domain YP_352375.1 IMG reference gene:2512954254; PFAM: Bacterial extracellular solute-binding protein, family 7 YP_352376.1 IMG reference gene:2512954255; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_352377.1 IMG reference gene:2512954256; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_352378.2 IMG reference gene:2512954257; PFAM: N-formylglutamate amidohydrolase YP_352379.1 IMG reference gene:2512954258; PFAM: SIS domain; Helix-turn-helix domain, rpiR family YP_352380.1 IMG reference gene:2512954259; PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA YP_352381.1 IMG reference gene:2512954260; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2 YP_352382.1 IMG reference gene:2512954261 YP_352383.1 IMG reference gene:2512954262; PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC YP_352384.1 IMG reference gene:2512954263; PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family YP_352385.1 IMG reference gene:2512954264; PFAM: Acyltransferase family YP_352386.1 IMG reference gene:2512954265; PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, bacterial type YP_352387.1 IMG reference gene:2512954266; PFAM: Copper binding proteins, plastocyanin/azurin family; TIGRFAM: pseudoazurin; pseudoazurin precursor (Blue Copper Protein) YP_352388.1 IMG reference gene:2512954267; PFAM: MORN repeat YP_352389.1 IMG reference gene:2512954268; PFAM: NAD synthase; Carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase YP_352390.1 IMG reference gene:2512954269; PFAM: pfkB family carbohydrate kinase; TIGRFAM: hexose kinase, 1-phosphofructokinase family YP_352391.1 IMG reference gene:2512954270; PFAM: NADPH-dependent FMN reductase; TIGRFAM: NAD(P)H:quinone oxidoreductase, type IV YP_352392.1 IMG reference gene:2512954271 YP_352393.1 IMG reference gene:2512954272; PFAM: Peptidase family M48 YP_352394.1 IMG reference gene:2512954273 YP_352395.1 IMG reference gene:2512954274; PFAM: PRC-barrel domain YP_352396.1 IMG reference gene:2512954275 YP_352397.2 IMG reference gene:2512954276; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: ribosomal protein S12 methylthiotransferase RimO; radical SAM methylthiotransferase, MiaB/RimO family; extended by 19 aa YP_352398.1 IMG reference gene:2512954277; PFAM: Aminotransferase class I and II YP_352399.1 IMG reference gene:2512954278; PFAM: Phosphoribosyl transferase domain YP_352400.1 IMG reference gene:2512954279; PFAM: LysE type translocator YP_352401.1 IMG reference gene:2512954280; PFAM: short chain dehydrogenase YP_352402.1 IMG reference gene:2512954281; PFAM: Pyridoxamine 5'-phosphate oxidase; Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region; TIGRFAM: pyridoxamine-phosphate oxidase YP_352403.1 IMG reference gene:2512954282; PFAM: 'Cold-shock' DNA-binding domain YP_352404.1 IMG reference gene:2512954283; PFAM: Uncharacterized ACR, COG1430 YP_352405.1 IMG reference gene:2512954285 YP_352406.1 IMG reference gene:2512954286 YP_352407.1 IMG reference gene:2512954287 YP_352408.1 IMG reference gene:2512954288 YP_352409.1 IMG reference gene:2512954289; TIGRFAM: phage tail tape measure protein, lambda family YP_352410.2 IMG reference gene:2512954290; PFAM: Phage Terminase; extended by 26 aa YP_352411.1 IMG reference gene:2512954291; PFAM: Phage terminase, small subunit; TIGRFAM: phage terminase, small subunit, putative, P27 family YP_352412.1 IMG reference gene:2512954292; PFAM: Phage head-tail joining protein; TIGRFAM: phage head-tail adaptor, putative, SPP1 family YP_352413.1 IMG reference gene:2512954293 YP_352414.1 IMG reference gene:2512954294; PFAM: Bacteriophage protein of unknown function (DUF646); TIGRFAM: phage protein, HK97 gp10 family YP_008686503.1 IMG reference gene:2512954295; new gene YP_352415.2 IMG reference gene:2512954296; truncated by 8 aa YP_352416.1 IMG reference gene:2512954297; PFAM: HNH endonuclease YP_352417.1 IMG reference gene:2512954298 YP_352418.2 IMG reference gene:2512954299; PFAM: Caudovirus prohead protease; Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family; phage prohead protease, HK97 family; extended by 111 aa YP_352419.1 IMG reference gene:2512954300; PFAM: Protein of unknown function (DUF3356) YP_352420.1 IMG reference gene:2512954301; PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family YP_352421.1 IMG reference gene:2512954302; PFAM: Phage integrase family YP_352422.1 IMG reference gene:2512954303; PFAM:Bacterial regulatory proteins, gntR family; UTRA domain YP_352423.1 IMG reference gene:2512954304; PFAM: short chain dehydrogenase YP_352424.1 IMG reference gene:2512954305; PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase YP_352425.1 IMG reference gene:2512954306; PFAM: family YP_352426.1 IMG reference gene:2512954307; PFAM: ABC transporter YP_352427.2 IMG reference gene:2512954308; PFAM: Branched-chain amino acid transport system / permease component YP_352428.1 IMG reference gene:2512954309; PFAM: Branched-chain amino acid transport system / permease component YP_352429.1 IMG reference gene:2512954310; PFAM: pfkB family carbohydrate kinase YP_352430.1 IMG reference gene:2512954311; PFAM: short chain dehydrogenase YP_352431.1 IMG reference gene:2512954312; PFAM: Aldehyde dehydrogenase family YP_352432.1 IMG reference gene:2512954313; PFAM: Protein of unknown function (DUF1228) YP_352433.1 IMG reference gene:2512954314 YP_352434.1 IMG reference gene:2512954315; PFAM: Uncharacterized ACR, YdiU/UPF0061 family YP_352435.1 IMG reference gene:2512954316; PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; 2-amino-3-ketobutyrate coenzyme A ligase YP_352436.1 IMG reference gene:2512954317; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase; L-threonine 3-dehydrogenase YP_008686504.1 IMG reference gene:2512954318; new gene YP_352437.1 IMG reference gene:2512954319; PFAM: Cytochrome P450 YP_352438.1 IMG reference gene:2512954320 YP_352439.1 IMG reference gene:2512954321; PFAM: Catalase; Catalase-related immune-responsive YP_352440.2 IMG reference gene:2512954322; truncated by 5 aa YP_352441.1 IMG reference gene:2512954323; PFAM: Methylpurine-DNA glycosylase (MPG); TIGRFAM: DNA-3-methyladenine glycosylase (3mg) YP_352442.1 IMG reference gene:2512954324 YP_352443.1 IMG reference gene:2512954325; PFAM: Protein of unknown function (DUF3618) YP_352444.1 IMG reference gene:2512954326; PFAM: Protein of unknown function (DUF1469) YP_352445.1 IMG reference gene:2512954327 YP_352446.2 IMG reference gene:2512954328 YP_352447.1 IMG reference gene:2512954329 YP_352448.2 IMG reference gene:2512954330; PFAM: Phosphate-starvation-inducible E; extended by 51 aa YP_352449.1 IMG reference gene:2512954331; PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase YP_352450.1 IMG reference gene:2512954332; PFAM: Protein of unknown function (DUF1178) YP_352451.1 IMG reference gene:2512954333; PFAM: NUDIX domain YP_352452.1 IMG reference gene:2512954334; PFAM: Glutathione peroxidase YP_352453.2 IMG reference gene:2512954335; PFAM: Histone deacetylase domain; extended by 6 aa YP_352454.1 IMG reference gene:2512954336; PFAM: 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase YP_352455.1 IMG reference gene:2512954337; PFAM: NnrU protein YP_352456.1 IMG reference gene:2512954338; PFAM: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) YP_352457.1 IMG reference gene:2512954339; PFAM: Cytochrome c; Di-haem cytochrome c peroxidase YP_352458.1 IMG reference gene:2512954340 YP_352459.1 IMG reference gene:2512954341; PFAM: Bacterial extracellular solute-binding protein YP_352460.1 IMG reference gene:2512954342; PFAM: Binding-protein-dependent transport system inner membrane component YP_352461.1 IMG reference gene:2512954343; PFAM: Binding-protein-dependent transport system inner membrane component YP_352462.2 IMG reference gene:2512954344; PFAM: ABC transporter; TOBE domain; TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit; extended by 20 aa YP_352463.1 IMG reference gene:2512954345; PFAM: Amidase YP_352464.1 IMG reference gene:2512954346; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_352465.1 IMG reference gene:2512954347; PFAM: Periplasmic binding protein YP_352466.1 IMG reference gene:2512954348; PFAM: FecCD transport family YP_352467.1 IMG reference gene:2512954349; PFAM: ABC transporter YP_352468.1 IMG reference gene:2512954350; PFAM: Adenosylcobinamide amidohydrolase YP_352469.2 IMG reference gene:2512954351; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_352470.2 IMG reference gene:2512954352; extended by 25 aa YP_352471.1 IMG reference gene:2512954353; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family YP_352472.1 IMG reference gene:2512954354; PFAM: Sigma-70, region 4; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; alternative sigma factor RpoH YP_352473.2 IMG reference gene:2512954355; PFAM: Methyltransferase domain; extended by 5 aa YP_352474.1 IMG reference gene:2512954356; PFAM: Oligopeptidase F; Peptidase family M3; TIGRFAM: oligoendopeptidase, pepF/M3 family YP_352475.1 IMG reference gene:2512954357; PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA ligase, ATP-dependent, PP_1105 family YP_352476.1 IMG reference gene:2512954358; PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: putative exonuclease, DNA ligase-associated YP_352477.2 IMG reference gene:2512954359; PFAM: Domain of unknown function (DUF404); Domain of unknown function (DUF407); extended by 7 aa YP_352478.1 IMG reference gene:2512954360; PFAM: Bacterial domain of unknown function (DUF403) YP_352479.1 IMG reference gene:2512954361; PFAM: Transglutaminase-like superfamily; Bacterial transglutaminase-like N-terminal region YP_352480.1 IMG reference gene:2512954362; PFAM: Proteasome subunit YP_352481.1 IMG reference gene:2512954363 YP_352482.1 IMG reference gene:2512954364; PFAM: SCP-2 sterol transfer family YP_352483.1 IMG reference gene:2512954365 YP_352484.2 IMG reference gene:2512954366; PFAM: Helicase conserved C-terminal domain; extended by 25 aa YP_352485.1 IMG reference gene:2512954367; PFAM: S4 domain YP_352486.1 IMG reference gene:2512954368; PFAM: Domain of unknown function (DUF3470); 4Fe-4S binding domain YP_352487.1 IMG reference gene:2512954369; PFAM: CarD-like/TRCF domain YP_352488.2 IMG reference gene:2512954370; PFAM: Cobalamin-5-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase/cobalamin synthase YP_352489.1 IMG reference gene:2512954371; PFAM: Phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_352490.2 IMG reference gene:2512954372; PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family; truncated by 20 aa; TC 2.A.37.1 YP_352491.1 IMG reference gene:2512954373 YP_352492.2 IMG reference gene:2512954374; PFAM: Protein of unknown function (DUF541); truncated by 14 aa YP_352493.1 IMG reference gene:2512954375; PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase YP_352494.1 IMG reference gene:2512954376 YP_352495.1 IMG reference gene:2512954377; PFAM: Response regulator receiver domain YP_352496.1 IMG reference gene:2512954378; PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain YP_352497.1 IMG reference gene:2512954379; PFAM: CheW-like domain YP_352498.1 IMG reference gene:2512954380; PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain YP_352499.1 IMG reference gene:2512954381; PFAM: Response regulator receiver domain YP_352500.1 IMG reference gene:2512954382 YP_352501.1 IMG reference gene:2512954383; PFAM: CheD YP_352502.1 IMG reference gene:2512954384; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_352503.2 IMG reference gene:2512954385; truncated by 42 aa YP_352504.1 IMG reference gene:2512954386; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_352505.1 IMG reference gene:2512954387; PFAM: Response regulator receiver domain YP_352506.1 IMG reference gene:2512954388 YP_352507.2 IMG reference gene:2512954389; PFAM: Alpha amylase, catalytic domain; Domain of unknown function (DUF3416); truncated by 66 aa YP_352508.1 IMG reference gene:2512954390; PFAM: Alpha amylase, catalytic domain; TIGRFAM: trehalose synthase; trehalose synthase-fused probable maltokinase YP_352509.1 IMG reference gene:2512954391; PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase YP_352510.1 IMG reference gene:2512954392; PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: glycogen debranching enzyme GlgX YP_352511.1 IMG reference gene:2512954393; PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; Domain of unknown function (DUF3459); TIGRFAM: malto-oligosyltrehalose trehalohydrolase YP_352512.1 IMG reference gene:2512954394; PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase YP_352513.1 IMG reference gene:2512954395; PFAM: Alpha amylase, catalytic domain; TIGRFAM: malto-oligosyltrehalose synthase YP_352514.1 IMG reference gene:2512954396; PFAM: short chain dehydrogenase YP_352515.1 IMG reference gene:2512954397; PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase YP_352516.1 IMG reference gene:2512954398; PFAM: Colicin V production protein YP_352517.1 IMG reference gene:2512954399; PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA YP_352518.1 IMG reference gene:2512954400; PFAM: Paraquat-inducible protein A YP_352519.1 IMG reference gene:2512954401; PFAM: ABC transporter YP_352520.1 IMG reference gene:2512954402; PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein YP_352521.1 IMG reference gene:2512954403; PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase YP_352522.1 IMG reference gene:2512954404; PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase YP_352523.1 IMG reference gene:2512954405; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein YP_352524.1 IMG reference gene:2512954406; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II YP_352525.2 IMG reference gene:2512954407; PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family YP_352526.1 IMG reference gene:2512954408 YP_352527.2 IMG reference gene:2512954409; PFAM: Terminase-like family; extended by 18 aa YP_352528.1 IMG reference gene:2512954410; PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family YP_352529.1 IMG reference gene:2512954411 YP_352530.1 IMG reference gene:2512954412; PFAM: Caudovirus prohead protease; TIGRFAM: phage prohead protease, HK97 family YP_352531.1 IMG reference gene:2512954413; PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family YP_352532.1 IMG reference gene:2512954414; TIGRFAM: phage conserved hypothetical protein, phiE125 gp8 family YP_352533.1 IMG reference gene:2512954415; PFAM: Phage head-tail joining protein YP_352534.1 IMG reference gene:2512954416 YP_352535.1 IMG reference gene:2512954417; PFAM: Phage major tail protein 2; TIGRFAM: phage major tail protein, TP901-1 family YP_352536.1 IMG reference gene:2512954418; PFAM: Conserved hypothetical phage protein (DUF2376); Protein of unknown function (DUF3356); TIGRFAM: phage conserved hypothetical protein YP_352537.2 IMG reference gene:2512954419; TIGRFAM: phage tail tape measure protein, lambda family YP_352538.1 IMG reference gene:2512954420; PFAM: Conserved hypothetical protein 2217 (DUF2460); TIGRFAM: TIGR02217 family protein YP_352539.1 IMG reference gene:2512954421; PFAM: Phage conserved hypothetical protein BR0599; Uncharacterized conserved protein (DUF2163); TIGRFAM: phage conserved hypothetical protein BR0599 YP_352540.1 IMG reference gene:2512954422; TIGRFAM: putative phage cell wall peptidase, NlpC/P60 family YP_352541.1 IMG reference gene:2512954423 YP_352542.1 IMG reference gene:2512954424 YP_352543.1 IMG reference gene:2512954425; PFAM: Serine acetyltransferase, N-terminal; Bacterial transferase hexapeptide (three repeats); TIGRFAM: serine O-acetyltransferase YP_352544.1 IMG reference gene:2512954426; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form YP_352545.1 IMG reference gene:2512954427; PFAM: Transketolase, C-terminal domain; Biotin-requiring enzyme; Transketolase, pyrimidine binding domain YP_352546.1 IMG reference gene:2512954428; PFAM: Dehydrogenase E1 component; TIGRFAM: pyruvate dehydrogenase E1 component, alpha subunit YP_352547.1 IMG reference gene:2512954429; PFAM: Septum formation initiator YP_352548.1 IMG reference gene:2512954430; PFAM: DeoC/LacD family aldolase YP_352549.1 IMG reference gene:2512954431; PFAM: Phosphoglycerate kinase YP_352550.1 IMG reference gene:2512954432; PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YP_352551.1 IMG reference gene:2512954433; PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YP_352552.1 IMG reference gene:2512954434; PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase YP_352553.1 IMG reference gene:2512954435; PFAM: Uncharacterised protein family (UPF0075) YP_352554.1 IMG reference gene:2512954436; PFAM: Cupin superfamily (DUF985) YP_352555.1 IMG reference gene:2512954437 YP_352556.1 IMG reference gene:2512954438; PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase YP_352557.1 IMG reference gene:2512954439; PFAM: EamA-like transporter family YP_352558.1 IMG reference gene:2512954440; PFAM: Ferric uptake regulator family YP_352559.1 IMG reference gene:2512954441; PFAM: Class II vitamin B12-dependent ribonucleotide reductase; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent YP_352560.1 IMG reference gene:2512954442; PFAM: Cell Wall Hydrolase YP_352563.1 IMG reference gene:2512954446; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: putative molybdenum utilization protein ModD YP_352564.1 IMG reference gene:2512954447; PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing) YP_352565.1 IMG reference gene:2512954448; PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase YP_352566.1 IMG reference gene:2512954449; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; 2-phosphoglycolate phosphatase, prokaryotic YP_352567.2 IMG reference gene:2512954450; PFAM: CreA protein; truncated by 36 aa YP_352568.1 IMG reference gene:2512954451; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_352569.2 IMG reference gene:2512954452; PFAM: OmpW family YP_352570.2 IMG reference gene:2512954453; PFAM: Carboxyl transferase domain; truncated by 24 aa YP_352571.1 IMG reference gene:2512954454; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit YP_352572.1 IMG reference gene:2512954455; PFAM: HMGL-like YP_352573.1 IMG reference gene:2512954456; PFAM: Enoyl-CoA hydratase/isomerase family YP_352574.1 IMG reference gene:2512954457; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YP_352575.2 IMG reference gene:2512954458; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit YP_352576.1 IMG reference gene:2512954459; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C YP_352577.1 IMG reference gene:2512954460; PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; TIGRFAM: NADH dehydrogenase I, D subunit YP_352578.1 IMG reference gene:2512954461; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit YP_352579.1 IMG reference gene:2512954462 YP_352580.1 IMG reference gene:2512954463; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: NADH-quinone oxidoreductase, F subunit YP_352581.1 IMG reference gene:2512954464 YP_008686505.1 IMG reference gene:2512954465; new gene YP_352582.2 IMG reference gene:2512954466; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Domain of unknown function (DUF1982); TIGRFAM: NADH-quinone oxidoreductase, chain G; extended by 19 aa YP_352583.1 IMG reference gene:2512954467 YP_352584.1 IMG reference gene:2512954468; PFAM: NADH dehydrogenase YP_352585.1 IMG reference gene:2512954469; TIGRFAM: NADH-quinone oxidoreductase, chain I YP_352586.1 IMG reference gene:2512954470; PFAM: Carboxymuconolactone decarboxylase family YP_352587.1 IMG reference gene:2512954471; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_352588.1 IMG reference gene:2512954472; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YP_352589.1 IMG reference gene:2512954473; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L YP_352590.1 IMG reference gene:2512954474; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M YP_352591.1 IMG reference gene:2512954475; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N YP_352592.2 IMG reference gene:2512954476; PFAM: Biotin protein ligase C terminal domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region; extended by 9 aa YP_352593.1 IMG reference gene:2512954477; PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III YP_352594.1 IMG reference gene:2512954478; PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein YP_008686506.1 IMG reference gene:2512954479; new gene YP_352595.1 IMG reference gene:2512954480; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_352596.1 IMG reference gene:2512954481; PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; peptide chain release factor 3 YP_352597.1 IMG reference gene:2512954482; PFAM: short chain dehydrogenase YP_352598.2 IMG reference gene:2512954483; PFAM: ABC transporter; TOBE domain; truncated by 14 aa YP_352599.1 IMG reference gene:2512954484; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family YP_352600.1 IMG reference gene:2512954485; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase TatB YP_352601.1 IMG reference gene:2512954486; PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC YP_352602.1 IMG reference gene:2512954487; PFAM: Protein of unknown function (DUF815) YP_352603.1 IMG reference gene:2512954488; PFAM: Peptidase family M23; LysM domain YP_352604.1 IMG reference gene:2512954489; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_352605.1 IMG reference gene:2512954490; PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE YP_352606.2 IMG reference gene:2512954491; PFAM: Bacterial sugar transferase; extended by 34 aa YP_352607.1 IMG reference gene:2512954492; PFAM: Polysaccharide biosynthesis/export protein; SLBB domain YP_352608.1 IMG reference gene:2512954493; PFAM: O-Antigen ligase YP_352609.1 IMG reference gene:2512954494; PFAM: Glycosyl hydrolases family 16 YP_352610.1 IMG reference gene:2512954495; PFAM: Glycosyl transferase family 2 YP_352611.1 IMG reference gene:2512954496; PFAM: Glycosyl transferase family 2 YP_352612.1 IMG reference gene:2512954497 YP_352613.1 IMG reference gene:2512954498 YP_352614.1 IMG reference gene:2512954499; PFAM: Coenzyme PQQ synthesis protein D (PqqD) YP_352615.1 IMG reference gene:2512954500 YP_352616.1 IMG reference gene:2512954501; PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing) YP_352617.1 IMG reference gene:2512954502; PFAM: HPr Serine kinase C-terminal domain YP_352618.2 IMG reference gene:2512954503; PFAM: ABC transporter transmembrane region; ABC transporter; extended by 23 aa YP_352619.1 IMG reference gene:2512954504 YP_352620.2 IMG reference gene:2512954505; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; exopolysaccharide transport protein family; extended by 18 aa YP_352621.1 IMG reference gene:2512954506; PFAM: Glycosyl transferase family 2 YP_352622.1 IMG reference gene:2512954507; PFAM: Glycosyl transferase family 2 YP_352623.1 IMG reference gene:2512954508 YP_352624.1 IMG reference gene:2512954509; PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase YP_352625.1 IMG reference gene:2512954510; PFAM: NAD dependent epimerase/dehydratase family YP_352626.2 IMG reference gene:2512954511; PFAM: Glycosyl transferase family 8; extended by 18 aa YP_352627.1 IMG reference gene:2512954512; PFAM: NAD dependent epimerase/dehydratase family YP_352628.1 IMG reference gene:2512954513; PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family YP_352629.1 IMG reference gene:2512954514; PFAM: Luciferase-like monooxygenase; TIGRFAM: probable oxidoreductase, LLM family YP_352630.1 IMG reference gene:2512954515; PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_352631.1 IMG reference gene:2512954516 YP_352632.1 IMG reference gene:2512954517; PFAM: Protein of unknown function (DUF2380) YP_352633.1 IMG reference gene:2512954518; PFAM: Glutathione-dependent formaldehyde-activating enzyme; TIGRFAM: S-(hydroxymethyl)glutathione synthase YP_352634.1 IMG reference gene:2512954519; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase YP_352635.1 IMG reference gene:2512954520; PFAM: Cytochrome c YP_352636.1 IMG reference gene:2512954521; PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family YP_352637.1 IMG reference gene:2512954522; TIGRFAM: c-type cytochrome, methanol metabolism-related YP_352638.1 IMG reference gene:2512954523; PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: quinoprotein dehydrogenase-associated probable ABC transporter substrate-binding protein YP_352639.1 IMG reference gene:2512954524; PFAM: Rhodanese-like domain; TIGRFAM: PQQ-dependent catabolism-associated CXXCW motif protein YP_352640.2 IMG reference gene:2512954525; TIGRFAM: ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system; extended by 25 aa YP_352641.2 IMG reference gene:2512954526; PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme; TIGRFAM: PQQ-dependent catabolism-associated beta-propeller protein; 40-residue YVTN family beta-propeller repeat; extended by 8 aa YP_352642.1 IMG reference gene:2512954527 YP_352643.1 IMG reference gene:2512954528 YP_352644.1 IMG reference gene:2512954529; PFAM: ABC transporter; TIGRFAM: ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system YP_352645.1 IMG reference gene:2512954530; PFAM: ABC-2 type transporter; TIGRFAM: alcohol ABC transporter, permease protein YP_352646.1 IMG reference gene:2512954531 YP_352647.2 IMG reference gene:2512954532; PFAM: Metallo-beta-lactamase superfamily; truncated by 17 aa YP_352648.1 IMG reference gene:2512954533; PFAM: Sulphur oxidation protein SoxZ YP_352649.1 IMG reference gene:2512954534; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_352650.1 IMG reference gene:2512954535; PFAM: FIST C domain; FIST N domain YP_352651.1 IMG reference gene:2512954536; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_352652.1 IMG reference gene:2512954537 YP_352653.1 IMG reference gene:2512954538 YP_352654.1 IMG reference gene:2512954539; PFAM: ABC transporter YP_352655.1 IMG reference gene:2512954540; PFAM: NMT1/THI5 like YP_352656.1 IMG reference gene:2512954541; PFAM: Binding-protein-dependent transport system inner membrane component YP_352657.1 IMG reference gene:2512954542; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB YP_352658.1 IMG reference gene:2512954543; PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU YP_352659.1 IMG reference gene:2512954544; PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein YP_352660.1 IMG reference gene:2512954545; PFAM: Binding-protein-dependent transport system inner membrane component; Domain of unknown function (DUF3333); TIGRFAM: phosphate ABC transporter, permease protein PstA YP_352661.1 IMG reference gene:2512954546; PFAM: Binding-protein-dependent transport system inner membrane component; Phosphate ATP-binding cassette transporter; TIGRFAM: phosphate ABC transporter, permease protein PstC; phosphate ABC transporter, permease protein PstA YP_352662.1 IMG reference gene:2512954547 YP_352663.1 IMG reference gene:2512954548; PFAM: Uncharacterised ACR, COG2135 YP_352664.2 IMG reference gene:2512954549; truncated by 12 aa YP_352665.1 IMG reference gene:2512954550; PFAM: Flavin reductase like domain YP_352666.1 IMG reference gene:2512954551; PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) YP_352667.1 IMG reference gene:2512954552; PFAM: 2'-deoxycytidine 5'-triphosphate deaminase (DCD) YP_352668.1 IMG reference gene:2512954554; PFAM: MerR family regulatory protein YP_352669.1 IMG reference gene:2512954555; PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, alpha subunit YP_352670.1 IMG reference gene:2512954556; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III YP_352671.1 IMG reference gene:2512954557; PFAM: Fatty acid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX YP_352672.1 IMG reference gene:2512954558; PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32 YP_352673.1 IMG reference gene:2512954559; PFAM: Uncharacterized ACR, COG1399 YP_352674.1 IMG reference gene:2512954560; PFAM: SmpA / OmlA family YP_352675.1 IMG reference gene:2512954561; PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase YP_352676.1 IMG reference gene:2512954562 YP_352677.1 IMG reference gene:2512954563; PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase YP_352678.1 IMG reference gene:2512954564; PFAM: Protein of unknown function (DUF1153) YP_352679.1 IMG reference gene:2512954565; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_352680.1 IMG reference gene:2512954566; PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase C4 zinc finger domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent YP_352681.1 IMG reference gene:2512954567; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG YP_352682.1 IMG reference gene:2512954568 YP_352683.1 IMG reference gene:2512954569 YP_352684.1 IMG reference gene:2512954570; PFAM: Phosphoribosyl-AMP cyclohydrolase YP_352685.1 IMG reference gene:2512954571; PFAM: tRNA synthetases class I (E and Q), catalytic domain YP_352686.1 IMG reference gene:2512954572; PFAM: Glucose inhibited division protein A; TIGRFAM: tRNA:m(5)U-54 methyltransferase YP_352687.1 IMG reference gene:2512954573; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit YP_352688.1 IMG reference gene:2512954574; PFAM: Usg-like family YP_352689.1 IMG reference gene:2512954575; PFAM: Arginase family; TIGRFAM: arginase YP_352690.1 IMG reference gene:2512954576; PFAM: Cytochrome C assembly protein; TIGRFAM: c-type cytochrome biogenesis protein CcmF YP_352691.1 IMG reference gene:2512954577; PFAM: Cytochrome C biogenesis protein YP_352692.1 IMG reference gene:2512954579; PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit YP_352693.1 IMG reference gene:2512954580; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type YP_352694.1 IMG reference gene:2512954581; PFAM: Sodium/calcium exchanger protein; TIGRFAM: calcium/proton exchanger (cax); K+-dependent Na+/Ca+ exchanger related-protein YP_352695.1 IMG reference gene:2512954582; PFAM: Arginine-tRNA-protein transferase, C terminus; Arginine-tRNA-protein transferase, N terminus YP_352696.1 IMG reference gene:2512954583; PFAM: RDD family YP_352697.1 IMG reference gene:2512954584; PFAM: Protein of unknown function (DUF2852) YP_352698.1 IMG reference gene:2512954585; PFAM: YbaK / prolyl-tRNA synthetases associated domain YP_352699.2 IMG reference gene:2512954586; PFAM: GlnD PII-uridylyltransferase; Glutamate-ammonia ligase adenylyltransferase; truncated by 8 aa YP_352700.1 IMG reference gene:2512954587 YP_352701.1 IMG reference gene:2512954588; PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase YP_008686507.1 IMG reference gene:2512954590; new gene YP_352702.1 IMG reference gene:2512954591; PFAM: S-adenosylmethionine-dependent methyltransferase YP_352703.1 IMG reference gene:2512954592 YP_352704.1 IMG reference gene:2512954593; PFAM: Peptidase family M48 YP_352705.1 IMG reference gene:2512954594; PFAM: VWA domain containing CoxE-like protein YP_352706.1 IMG reference gene:2512954595 YP_352707.2 IMG reference gene:2512954596; PFAM: Protein of unknown function (DUF2927) YP_352708.1 IMG reference gene:2512954597; PFAM: Acetyltransferase (GNAT) family YP_352709.1 IMG reference gene:2512954598; PFAM: ATPase family associated with various cellular activities (AAA) YP_352710.1 IMG reference gene:2512954599; PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA YP_352711.1 IMG reference gene:2512954600; PFAM: FAD binding domain YP_352712.2 IMG reference gene:2512954601; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1; extended by 19 aa YP_352713.1 IMG reference gene:2512954602; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth) YP_352714.1 IMG reference gene:2512954603; PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein YP_352715.1 IMG reference gene:2512954604; PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative YP_352716.2 IMG reference gene:2512954605; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); truncated by 51 aa YP_352717.1 IMG reference gene:2512954606; PFAM: Iron-containing alcohol dehydrogenase YP_352718.1 IMG reference gene:2512954607; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase YP_352719.1 IMG reference gene:2512954608 YP_352720.1 IMG reference gene:2512954609; PFAM: Predicted small integral membrane protein (DUF2160) YP_352721.1 IMG reference gene:2512954610; PFAM: Binding-protein-dependent transport system inner membrane component YP_352722.1 IMG reference gene:2512954611; PFAM: Binding-protein-dependent transport system inner membrane component YP_352723.1 IMG reference gene:2512954612; PFAM: ABC transporter YP_352724.1 IMG reference gene:2512954613; PFAM: ABC transporter YP_352725.2 IMG reference gene:2512954614; PFAM: FAD dependent oxidoreductase; truncated by 7 aa YP_352726.1 IMG reference gene:2512954615 YP_352727.1 IMG reference gene:2512954616 YP_352728.1 IMG reference gene:2512954617; PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family YP_352729.2 IMG reference gene:2512954618; PFAM: PRC-barrel domain; extended by 74 aa YP_352730.1 IMG reference gene:2512954619 YP_352731.1 IMG reference gene:2512954620; PFAM: Putative phospholipid-binding domain YP_352732.1 IMG reference gene:2512954621; PFAM: Response regulator receiver domain YP_352733.1 IMG reference gene:2512954622; PFAM: MgtC family YP_352734.1 IMG reference gene:2512954623 YP_352735.1 IMG reference gene:2512954624; PFAM: Eukaryotic and archaeal DNA primase small subunit; ATP dependent DNA ligase domain; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA polymerase LigD, ligase domain; DNA ligase D; DNA polymerase LigD, polymerase domain; DNA ligase D, 3'-phosphoesterase domain YP_352736.1 IMG reference gene:2512954625 YP_352737.2 IMG reference gene:2512954626; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; extended by 15 aa YP_352738.1 IMG reference gene:2512954627; PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase YP_352739.1 IMG reference gene:2512954628; PFAM: Protein of unknown function (DUF1289) YP_352740.1 IMG reference gene:2512954629; PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF YP_352741.2 IMG reference gene:2512954630; TIGRFAM: cytochrome c-type biogenesis protein CcmI; extended by 9 aa YP_352742.1 IMG reference gene:2512954631; PFAM: FAD dependent oxidoreductase; TIGRFAM: sarcosine oxidase, beta subunit family, heterotetrameric form YP_352743.1 IMG reference gene:2512954632 YP_352744.1 IMG reference gene:2512954633; PFAM: Sarcosine oxidase, delta subunit family; TIGRFAM: sarcosine oxidase, delta subunit family, heterotetrameric form YP_352745.2 IMG reference gene:2512954634; PFAM: Glycine cleavage T-protein C-terminal barrel domain; Aminomethyltransferase folate-binding domain; TIGRFAM: sarcosine oxidase, alpha subunit family, heterotetrameric form YP_352746.1 IMG reference gene:2512954635; PFAM: Sarcosine oxidase, gamma subunit family; TIGRFAM: sarcosine oxidase, gamma subunit family, heterotetrameric form YP_352747.2 IMG reference gene:2512954636; PFAM: Acyltransferase family YP_352748.1 IMG reference gene:2512954637; PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain YP_352749.1 IMG reference gene:2512954638; PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00730 family protein YP_352750.1 IMG reference gene:2512954639 YP_352751.1 IMG reference gene:2512954640; PFAM: ABC transporter transmembrane region; ABC transporter YP_352752.1 IMG reference gene:2512954641; PFAM: Uncharacterized protein conserved in bacteria (DUF2133) YP_352753.1 IMG reference gene:2512954642; PFAM: PQQ enzyme repeat YP_352754.1 IMG reference gene:2512954643; PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain YP_352755.1 IMG reference gene:2512954644; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_352756.1 IMG reference gene:2512954645; PFAM: Binding-protein-dependent transport system inner membrane component YP_352757.1 IMG reference gene:2512954646; PFAM: Binding-protein-dependent transport system inner membrane component YP_352759.2 IMG reference gene:2512954648; PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase; extended by 14 aa YP_352760.1 IMG reference gene:2512954649; PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase YP_352761.1 IMG reference gene:2512954650; PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor YP_352762.1 IMG reference gene:2512954651; PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase YP_352763.1 IMG reference gene:2512954652; PFAM: Cytidylyltransferase family YP_352764.1 IMG reference gene:2512954653; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_352765.1 IMG reference gene:2512954654; PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP YP_352766.1 IMG reference gene:2512954655 YP_352767.1 IMG reference gene:2512954656; PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein YP_352768.1 IMG reference gene:2512954657; PFAM: Outer membrane protein (OmpH-like) YP_352769.1 IMG reference gene:2512954658; PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ YP_352770.2 IMG reference gene:2512954659; PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; extended by 9 aa YP_352771.1 IMG reference gene:2512954660; PFAM: Protein of unknown function (DUF1009) YP_352772.1 IMG reference gene:2512954661; PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase YP_352773.1 IMG reference gene:2512954662; PFAM: ABC transporter YP_352774.1 IMG reference gene:2512954663 YP_352775.1 IMG reference gene:2512954664; PFAM: AsnC family YP_352776.1 IMG reference gene:2512954665; PFAM: LysE type translocator YP_352777.2 IMG reference gene:2512954666; PFAM: Protein of unknown function (DUF419); extended by 40 aa YP_352778.1 IMG reference gene:2512954667; PFAM: tRNA synthetases class I (C) catalytic domain; TIGRFAM: cysteinyl-tRNA synthetase YP_352779.2 IMG reference gene:2512954668; PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; extended by 9 aa YP_352780.1 IMG reference gene:2512954669 YP_352781.1 IMG reference gene:2512954670; PFAM: Squalene/phytoene synthase YP_352782.1 IMG reference gene:2512954671; PFAM: Major Facilitator Superfamily YP_352783.1 IMG reference gene:2512954672; PFAM: HhH-GPD superfamily base excision DNA repair protein YP_352784.1 IMG reference gene:2512954673; PFAM: Phospholipase/Carboxylesterase YP_352785.1 IMG reference gene:2512954674; PFAM: HNH endonuclease YP_352786.1 IMG reference gene:2512954675 YP_008686508.1 IMG reference gene:2512954676; new gene YP_352787.1 IMG reference gene:2512954677; PFAM: NADPH-dependent FMN reductase; TIGRFAM: arsenical resistance protein ArsH YP_352788.1 IMG reference gene:2512954678; PFAM: Major Facilitator Superfamily YP_352789.1 IMG reference gene:2512954679; PFAM: Glucose-6-phosphate dehydrogenase, C-terminal domain; Glucose-6-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase YP_352790.1 IMG reference gene:2512954680; PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: 6-phosphogluconolactonase YP_352791.1 IMG reference gene:2512954681; PFAM: Phosphoglucose isomerase YP_352792.1 IMG reference gene:2512954682; PFAM: Endoribonuclease L-PSP YP_352793.1 IMG reference gene:2512954683; PFAM: Rhodanese-like domain YP_352794.1 IMG reference gene:2512954684; PFAM: YeeE/YedE family (DUF395) YP_352795.1 IMG reference gene:2512954685 YP_352796.1 IMG reference gene:2512954686; PFAM: Glucose / Sorbosone dehydrogenase YP_352797.1 IMG reference gene:2512954687; PFAM: Cytochrome c YP_352798.1 IMG reference gene:2512954688 YP_352799.2 IMG reference gene:2512954689; truncated by 41 aa YP_352800.1 IMG reference gene:2512954690; PFAM: Glycosyltransferase family 29 (sialyltransferase) YP_352801.2 IMG reference gene:2512954691; truncated by 12 aa YP_352802.2 IMG reference gene:2512954692; PFAM: Polysaccharide pyruvyl transferase; extended by 21 aa YP_352803.2 IMG reference gene:2512954693; truncated by 27 aa YP_352804.1 IMG reference gene:2512954694; PFAM: Uncharacterised protein family (UPF0150) YP_352805.1 IMG reference gene:2512954695; PFAM: Phage integrase family YP_352806.1 IMG reference gene:2512954696 YP_352807.1 IMG reference gene:2512954697 YP_352808.1 IMG reference gene:2512954698 YP_352809.1 IMG reference gene:2512954699 YP_352810.1 IMG reference gene:2512954700 YP_352811.2 IMG reference gene:2512954701; extended by 14 aa YP_352812.1 IMG reference gene:2512954702 YP_352813.1 IMG reference gene:2512954703 YP_352814.1 IMG reference gene:2512954704 YP_352815.1 IMG reference gene:2512954705 YP_352816.1 IMG reference gene:2512954706 YP_352817.1 IMG reference gene:2512954707 YP_352818.2 IMG reference gene:2512954708; PFAM: Phage Tail Protein X YP_352819.2 IMG reference gene:2512954709; extended by 48 aa YP_352820.1 IMG reference gene:2512954710; PFAM: Protein of unknown function (DUF497) YP_352821.1 IMG reference gene:2512954711 YP_008686509.1 IMG reference gene:2512954713; new gene YP_352823.1 IMG reference gene:2512954714 YP_352824.1 IMG reference gene:2512954716 YP_352825.1 IMG reference gene:2512954717 YP_352826.1 IMG reference gene:2512954718; PFAM: Pterin binding enzyme YP_352827.2 IMG reference gene:2512954719; truncated by 14 aa YP_352828.1 IMG reference gene:2512954720 YP_352829.1 IMG reference gene:2512954721; PFAM: Ppx/GppA phosphatase family YP_352830.1 IMG reference gene:2512954722; PFAM: FtsJ-like methyltransferase; TIGRFAM: cell division protein FtsJ YP_352831.1 IMG reference gene:2512954723; PFAM: Bacterial protein of unknown function (DUF882) YP_352832.2 IMG reference gene:2512954724; PFAM: Putative peptidoglycan binding domain; L,D-transpeptidase catalytic domain; truncated by 10 aa YP_352833.1 IMG reference gene:2512954725; PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_352834.1 IMG reference gene:2512954726; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein YP_352835.1 IMG reference gene:2512954727; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II YP_352836.1 IMG reference gene:2512954728; PFAM: Invasion associated locus B (IalB) protein YP_352837.1 IMG reference gene:2512954729; PFAM: Catalase; Catalase-related immune-responsive YP_352838.1 IMG reference gene:2512954730; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_352839.1 IMG reference gene:2512954731; PFAM: Redoxin YP_352840.1 IMG reference gene:2512954732; PFAM: Major intrinsic protein; TIGRFAM: MIP family channel proteins YP_352841.1 IMG reference gene:2512954733; TIGRFAM: lipoate synthase YP_352842.1 IMG reference gene:2512954734; PFAM: Cytochrome c YP_352843.1 IMG reference gene:2512954735; PFAM: Cytochrome C' YP_352844.1 IMG reference gene:2512954736; PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase YP_352845.1 IMG reference gene:2512954737; PFAM: Polyketide cyclase / dehydrase and lipid transport YP_352846.1 IMG reference gene:2512954738 YP_352847.1 IMG reference gene:2512954739; PFAM: Integrase core domain YP_352848.1 IMG reference gene:2512954740; PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase YP_352849.1 IMG reference gene:2512954741; PFAM: FAD dependent oxidoreductase YP_352850.1 IMG reference gene:2512954742; PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts YP_352851.1 IMG reference gene:2512954743; PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type YP_352852.2 IMG reference gene:2512954744; PFAM: pfkB family carbohydrate kinase YP_352853.1 IMG reference gene:2512954745; PFAM: Indigoidine synthase A like protein YP_352854.2 IMG reference gene:2512954746; PFAM: short chain dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase; truncated by 8 aa YP_352855.1 IMG reference gene:2512954747; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_008686510.1 IMG reference gene:2512954748; new gene YP_352856.1 IMG reference gene:2512954749; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family YP_352857.1 IMG reference gene:2512954750; TIGRFAM: RND family efflux transporter, MFP subunit YP_352858.1 IMG reference gene:2512954751; PFAM: Bacterial regulatory proteins, tetR family YP_352859.1 IMG reference gene:2512954752; PFAM: DSBA-like thioredoxin domain YP_352860.1 IMG reference gene:2512954753; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily YP_352861.1 IMG reference gene:2512954754; PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd) YP_352862.1 IMG reference gene:2512954755 YP_352863.1 IMG reference gene:2512954756; PFAM: Delta-aminolevulinic acid dehydratase YP_352864.1 IMG reference gene:2512954757; PFAM: Family of unknown function (DUF500) YP_352865.2 IMG reference gene:2512954758; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; truncated by 8 aa YP_352866.1 IMG reference gene:2512954759; PFAM: Penicillin amidase YP_352867.2 IMG reference gene:2512954761; PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; extended by 31 aa YP_352868.1 IMG reference gene:2512954762; PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq YP_352869.1 IMG reference gene:2512954763; PFAM: Cation transport protein YP_352870.1 IMG reference gene:2512954764; PFAM: TrkA-N domain; TrkA-C domain YP_352871.1 IMG reference gene:2512954765; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_352872.2 IMG reference gene:2512954766; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; truncated by 16 aa YP_352873.1 IMG reference gene:2512954767; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_352874.1 IMG reference gene:2512954768; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold YP_352875.1 IMG reference gene:2512954769; PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family YP_352876.1 IMG reference gene:2512954770; PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_352877.1 IMG reference gene:2512954771; PFAM: YgbB family; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_352878.1 IMG reference gene:2512954772; PFAM: Phosphatidylglycerophosphatase A YP_352879.1 IMG reference gene:2512954773; PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain YP_352880.1 IMG reference gene:2512954774; PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family YP_352881.1 IMG reference gene:2512954777; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase YP_352882.1 IMG reference gene:2512954778; PFAM: NnrS protein YP_352883.1 IMG reference gene:2512954779; PFAM: Protein of unknown function (DUF1636) YP_352884.1 IMG reference gene:2512954780; PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain; TIGRFAM: cobalamin biosynthesis protein CobW YP_352885.1 IMG reference gene:2512954781; PFAM: CobN/Magnesium Chelatase YP_352886.1 IMG reference gene:2512954782; PFAM: Precorrin-8X methylmutase YP_352887.2 IMG reference gene:2512954783; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-2 C20-methyltransferase YP_352888.1 IMG reference gene:2512954784; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-3B C17-methyltransferase YP_352889.1 IMG reference gene:2512954785; PFAM: Precorrin-6x reductase CbiJ/CobK; TIGRFAM: precorrin-6x reductase YP_352890.1 IMG reference gene:2512954786; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit YP_352891.1 IMG reference gene:2512954787; PFAM: Cobalamin synthesis G C-terminus YP_352892.1 IMG reference gene:2512954788; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-4 C11-methyltransferase YP_352893.1 IMG reference gene:2512954789; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase YP_352894.1 IMG reference gene:2512954790; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-6A synthase (deacetylating) YP_008686511.1 IMG reference gene:2512954791; new gene YP_352895.1 IMG reference gene:2512954792; PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase YP_352896.2 IMG reference gene:2512954793; PFAM: Shikimate kinase; extended by 18 aa YP_008686512.1 IMG reference gene:2512954794; new gene YP_352897.1 IMG reference gene:2512954795 YP_352898.2 IMG reference gene:2512954796; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_352899.1 IMG reference gene:2512954797; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain YP_352900.1 IMG reference gene:2512954798 YP_352901.1 IMG reference gene:2512954799 YP_352902.1 IMG reference gene:2512954800; PFAM: Trimethylamine methyltransferase (MTTB) YP_352903.1 IMG reference gene:2512954801; PFAM: Protein of unknown function (DUF330) YP_352904.1 IMG reference gene:2512954802; PFAM: mce related protein YP_352905.1 IMG reference gene:2512954803; PFAM: ABC transporter YP_352906.2 IMG reference gene:2512954804; PFAM: Permease; STAS domain; TIGRFAM: conserved hypothetical integral membrane protein; truncated by 10 aa YP_352907.1 IMG reference gene:2512954805 YP_352908.1 IMG reference gene:2512954806; PFAM: Cytochrome b(N-terminal)/b6/petB YP_352909.1 IMG reference gene:2512954808; PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La YP_352910.1 IMG reference gene:2512954809; PFAM: NADH:flavin oxidoreductase / NADH oxidase family YP_352911.1 IMG reference gene:2512954810; PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming YP_352912.2 IMG reference gene:2512954811; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family YP_352913.1 IMG reference gene:2512954812; TIGRFAM: RND family efflux transporter, MFP subunit YP_352914.2 IMG reference gene:2512954813; PFAM: Bacterial regulatory proteins, tetR family; extended by 11 aa YP_352915.1 IMG reference gene:2512954814 YP_352916.1 IMG reference gene:2512954815; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_352917.1 IMG reference gene:2512954816; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_352918.1 IMG reference gene:2512954817; PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL YP_352919.1 IMG reference gene:2512954818; PFAM: Domain of unknown function DUF59 YP_352920.1 IMG reference gene:2512954819; PFAM: Amidohydrolase YP_352921.1 IMG reference gene:2512954820; PFAM: MmoB/DmpM family YP_352922.1 IMG reference gene:2512954821; PFAM: Methane/Phenol/Toluene Hydroxylase YP_352923.1 IMG reference gene:2512954822; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain YP_352924.1 IMG reference gene:2512954823; PFAM: Methane/Phenol/Toluene Hydroxylase YP_352925.1 IMG reference gene:2512954824 YP_352926.1 IMG reference gene:2512954825 YP_352927.1 IMG reference gene:2512954826 YP_352928.1 IMG reference gene:2512954827 YP_352929.1 IMG reference gene:2512954828; PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain; TIGRFAM: RNA polymerase sigma-54 factor YP_352930.1 IMG reference gene:2512954829; PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase YP_352931.1 IMG reference gene:2512954830; PFAM: C4-dicarboxylate transporter/malic acid transport protein YP_008686513.1 IMG reference gene:2512954831; new gene YP_352932.1 IMG reference gene:2512954832; PFAM: ABC transporter YP_352933.1 IMG reference gene:2512954833; PFAM: Binding-protein-dependent transport system inner membrane component YP_352934.1 IMG reference gene:2512954834; PFAM: Binding-protein-dependent transport system inner membrane component YP_352935.1 IMG reference gene:2512954835; PFAM: Bacterial extracellular solute-binding protein YP_352936.1 IMG reference gene:2512954836; PFAM: Glycosyl hydrolase family 1; TIGRFAM: beta-galactosidase YP_352937.1 IMG reference gene:2512954837; PFAM: Glucokinase; TIGRFAM: glucokinase, proteobacterial type YP_352938.1 IMG reference gene:2512954838; PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain YP_352939.1 IMG reference gene:2512954839; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; TIGRFAM: carbon-monoxide dehydrogenase, large subunit YP_352940.1 IMG reference gene:2512954840; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain YP_352941.1 IMG reference gene:2512954841; PFAM: Carbon monoxide dehydrogenase subunit G (CoxG) YP_352942.1 IMG reference gene:2512954842; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain YP_352943.1 IMG reference gene:2512954843; PFAM: FIST C domain; FIST N domain YP_352944.1 IMG reference gene:2512954844; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_352945.1 IMG reference gene:2512954845; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YP_352946.1 IMG reference gene:2512954846; PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: glycogen debranching enzyme GlgX YP_352947.2 IMG reference gene:2512954847; PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type YP_352948.1 IMG reference gene:2512954848; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase YP_352949.1 IMG reference gene:2512954849; PFAM: Carbohydrate phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases YP_352950.1 IMG reference gene:2512954850; PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein YP_352951.1 IMG reference gene:2512954851; PFAM: MerR family regulatory protein; MerR, DNA binding; TIGRFAM: Cu(I)-responsive transcriptional regulator YP_352952.1 IMG reference gene:2512954852; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; copper ion binding protein; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_352953.1 IMG reference gene:2512954853; PFAM: Heavy-metal-associated domain YP_352954.1 IMG reference gene:2512954854 YP_008686514.1 IMG reference gene:2512954855; new gene YP_352955.1 IMG reference gene:2512954856; PFAM: Nucleoside diphosphate kinase YP_352956.1 IMG reference gene:2512954857; PFAM: ABC transporter YP_352957.1 IMG reference gene:2512954858; PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family YP_352958.1 IMG reference gene:2512954859; PFAM: Retroviral aspartyl protease; TIGRFAM: clan AA aspartic protease, TIGR02281 family YP_352959.1 IMG reference gene:2512954860; PFAM: DNA polymerase III chi subunit, HolC YP_352960.1 IMG reference gene:2512954861; PFAM: Cytosol aminopeptidase family, catalytic domain YP_352961.1 IMG reference gene:2512954862; PFAM: Predicted permease YjgP/YjgQ family YP_352962.1 IMG reference gene:2512954863; PFAM: Predicted permease YjgP/YjgQ family YP_352963.1 IMG reference gene:2512954864; PFAM: Organic solvent tolerance protein YP_352964.2 IMG reference gene:2512954865; PFAM: SurA N-terminal domain; PPIC-type PPIASE domain; truncated by 20 aa YP_352965.1 IMG reference gene:2512954866; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase YP_352966.1 IMG reference gene:2512954867; PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase YP_352967.1 IMG reference gene:2512954868 YP_352968.1 IMG reference gene:2512954869; PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific YP_352969.1 IMG reference gene:2512954870; PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1 YP_352970.1 IMG reference gene:2512954871; PFAM: Protein of unknown function (DUF1499) YP_352971.1 IMG reference gene:2512954872; PFAM: Arginase family; TIGRFAM: agmatinase YP_352972.1 IMG reference gene:2512954873; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase YP_352973.1 IMG reference gene:2512954874; PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein YP_352974.1 IMG reference gene:2512954875; PFAM: Bacterial extracellular solute-binding protein YP_352975.1 IMG reference gene:2512954876; PFAM: Inosine-uridine preferring nucleoside hydrolase YP_352976.1 IMG reference gene:2512954877; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_352977.2 IMG reference gene:2512954878; extended by 82 aa YP_352978.1 IMG reference gene:2512954879; PFAM: Cys/Met metabolism PLP-dependent enzyme YP_352979.1 IMG reference gene:2512954880; PFAM: Bacterial transferase hexapeptide (three repeats) YP_352980.1 IMG reference gene:2512954881; PFAM: Guanylate kinase; TIGRFAM: guanylate kinase YP_352981.1 IMG reference gene:2512954882; PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein YP_352982.1 IMG reference gene:2512954883; PFAM: PAS domain YP_352983.1 IMG reference gene:2512954884; PFAM: Class-II DAHP synthetase family; TIGRFAM: 3-deoxy-7-phosphoheptulonate synthase, class II YP_352984.1 IMG reference gene:2512954885; PFAM: DJ-1/PfpI family YP_352985.1 IMG reference gene:2512954886; PFAM: Receptor family ligand binding region YP_352986.1 IMG reference gene:2512954887; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter YP_352987.1 IMG reference gene:2512954888; PFAM: ABC transporter YP_352988.1 IMG reference gene:2512954889; PFAM: Branched-chain amino acid transport system / permease component YP_352989.1 IMG reference gene:2512954890; PFAM: Branched-chain amino acid transport system / permease component YP_352990.1 IMG reference gene:2512954891 YP_352991.1 IMG reference gene:2512954892 YP_352992.1 IMG reference gene:2512954894; PFAM: Disulfide bond formation protein DsbB YP_352993.1 IMG reference gene:2512954895; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; TIGRFAM: histidine utilization repressor, proteobacterial YP_352994.2 IMG reference gene:2512954896; PFAM: Amidohydrolase family; TIGRFAM: formiminoglutamate deiminase YP_352995.1 IMG reference gene:2512954897; PFAM: Amidohydrolase family; TIGRFAM: imidazolonepropionase YP_352996.1 IMG reference gene:2512954898; PFAM: Phenylalanine and histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase YP_352997.2 IMG reference gene:2512954899; PFAM: Urocanase; TIGRFAM: urocanate hydratase; truncated by 348 aa on 3' end due to sequence change YP_008686515.1 IMG reference gene:2512954900; PFAM: PHP domain; new gene YP_352998.1 IMG reference gene:2512954901; PFAM: Protein of unknown function (DUF1045); TIGRFAM: putative phosphonate metabolism protein YP_352999.1 IMG reference gene:2512954902; PFAM: Bacterial Transmembrane Pair family YP_008686516.1 IMG reference gene:2512954903; new gene YP_353000.1 IMG reference gene:2512954904; PFAM: Putative transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B YP_353001.1 IMG reference gene:2512954905; PFAM: ScpA/B protein YP_353002.1 IMG reference gene:2512954906; PFAM: Glycosyl hydrolase family 3 N terminal domain YP_353003.1 IMG reference gene:2512954907; PFAM: Sporulation related domain YP_353004.2 IMG reference gene:2512954908; PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase YP_353005.1 IMG reference gene:2512954909; PFAM: Protein of unknown function (DUF3154) YP_353006.1 IMG reference gene:2512954910; PFAM: Predicted Peptidoglycan domain; Predicted lysozyme (DUF847) YP_353007.2 IMG reference gene:2512954911; PFAM: CcmE YP_353008.1 IMG reference gene:2512954912; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form YP_353009.1 IMG reference gene:2512954913; PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase YP_353010.1 IMG reference gene:2512954914; PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YP_353011.1 IMG reference gene:2512954915; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_353012.2 IMG reference gene:2512954916; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase II; truncated by 26 aa YP_353013.1 IMG reference gene:2512954917; PFAM: BolA-like protein YP_353014.1 IMG reference gene:2512954918; PFAM: Glutaredoxin; TIGRFAM: monothiol glutaredoxin, Grx4 family YP_353015.1 IMG reference gene:2512954919; PFAM: Cell division protein ZapA YP_353016.2 IMG reference gene:2512954920 YP_353017.1 IMG reference gene:2512954921; PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast YP_353018.2 IMG reference gene:2512954922; PFAM: Protein of unknown function (DUF2934) YP_353019.2 IMG reference gene:2512954923; PFAM: Protein of unknown function (DUF808); extended by 41 aa YP_353020.1 IMG reference gene:2512954924; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I YP_353021.1 IMG reference gene:2512954925 YP_353022.1 IMG reference gene:2512954926; PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain YP_353023.1 IMG reference gene:2512954927; PFAM: CBS domain YP_353024.1 IMG reference gene:2512954928; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_353025.1 IMG reference gene:2512954929; PFAM: Aldehyde dehydrogenase family; TIGRFAM: methylmalonic acid semialdehyde dehydrogenase YP_353026.1 IMG reference gene:2512954930; PFAM: Cyclic nucleotide-binding domain YP_353027.2 IMG reference gene:2512954931; PFAM: Protein of unknown function (DUF2892) YP_353028.1 IMG reference gene:2512954932; PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit YP_353029.2 IMG reference gene:2512954933; PFAM: Major Facilitator Superfamily; extended by 10 aa YP_353030.1 IMG reference gene:2512954934; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase YP_353031.1 IMG reference gene:2512954935; PFAM: Bacterial protein of unknown function (DUF924) YP_353032.1 IMG reference gene:2512954936; PFAM: Sugar (and other) transporter; Major Facilitator Superfamily YP_353033.1 IMG reference gene:2512954937; PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_353034.1 IMG reference gene:2512954938 YP_353035.1 IMG reference gene:2512954939; PFAM: AhpC/TSA family YP_353036.1 IMG reference gene:2512954940; PFAM: Peptidase family M23 YP_353037.1 IMG reference gene:2512954941; PFAM: Protein of unknown function, DUF583 YP_353038.1 IMG reference gene:2512954942; PFAM: Predicted integral membrane protein (DUF2189) YP_353039.1 IMG reference gene:2512954943; PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2 YP_353040.1 IMG reference gene:2512954944; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family YP_353041.1 IMG reference gene:2512954945; PFAM: N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes YP_353042.1 IMG reference gene:2512954946; PFAM: Aminotransferase class I and II YP_353043.1 IMG reference gene:2512954947; PFAM: DSBA-like thioredoxin domain YP_353044.1 IMG reference gene:2512954948; PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_353045.2 IMG reference gene:2512954949; extended by 29 aa YP_353046.1 IMG reference gene:2512954950; PFAM: Aminotransferase class I and II; TIGRFAM: 5-aminolevulinic acid synthase YP_353047.1 IMG reference gene:2512954951 YP_353048.2 IMG reference gene:2512954952; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; truncated by 13 aa YP_353049.1 IMG reference gene:2512954953; PFAM: Acetyltransferase (GNAT) family YP_353050.1 IMG reference gene:2512954956; PFAM: Pirin C-terminal cupin domain; Pirin YP_353051.2 IMG reference gene:2512954957 YP_353052.2 IMG reference gene:2512954958; extended by 52 aa YP_353053.2 IMG reference gene:2512954959; extended by 31 aa YP_353054.2 IMG reference gene:2512954960; extended by 21 aa YP_353055.1 IMG reference gene:2512954961 YP_353056.2 IMG reference gene:2512954962 YP_008686517.1 IMG reference gene:2512954963; new gene YP_008686518.1 IMG reference gene:2512954964; new gene YP_353057.1 IMG reference gene:2512954965; PFAM: AP2 domain YP_008686519.1 IMG reference gene:2512954966; PFAM: Phage major tail protein 2; new gene YP_353058.2 IMG reference gene:2512954967; PFAM: Protein of unknown function (DUF3168); different sequence near 5' due to sequence change YP_353059.2 IMG reference gene:2512954968; PFAM: Bacteriophage protein of unknown function (DUF646); TIGRFAM: phage protein, HK97 gp10 family; extended by 14 aa on 3' end due to sequence change YP_353060.1 IMG reference gene:2512954969; PFAM: Phage head-tail joining protein; TIGRFAM: phage head-tail adaptor, putative, SPP1 family YP_353061.1 IMG reference gene:2512954970; PFAM: Phage QLRG family, putative DNA packaging; TIGRFAM: uncharacterized phage protein (possible DNA packaging) YP_353062.1 IMG reference gene:2512954971; PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family YP_353063.1 IMG reference gene:2512954972; PFAM: Caudovirus prohead protease; TIGRFAM: phage prohead protease, HK97 family YP_353064.1 IMG reference gene:2512954973; PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family YP_353065.2 IMG reference gene:2512954974; PFAM: Phage Terminase YP_353066.1 IMG reference gene:2512954975 YP_353067.1 IMG reference gene:2512954976 YP_353068.1 IMG reference gene:2512954977 YP_353069.1 IMG reference gene:2512954978; PFAM: HNH endonuclease YP_353070.1 IMG reference gene:2512954979 YP_008686520.1 IMG reference gene:2512954980; new gene YP_353071.1 IMG reference gene:2512954981; PFAM: Protein of unknown function (DUF2971) YP_008686521.1 IMG reference gene:2512954982; new gene YP_008686522.1 IMG reference gene:2512954983; PFAM: Peptidase S24-like; new gene YP_008686523.1 IMG reference gene:2512954984; new gene YP_353072.1 IMG reference gene:2512954985; PFAM: H-NS histone family YP_353073.2 IMG reference gene:2512954986; PFAM: Recombinase; Resolvase, N terminal domain; extended by 73 aa on 3' end due to sequence change YP_353075.1 IMG reference gene:2512954988; PFAM: Glutamine amidotransferase class-I; GMP synthase C terminal domain; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit YP_353076.1 IMG reference gene:2512954989; PFAM: EamA-like transporter family YP_353077.1 IMG reference gene:2512954990; PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX) YP_353078.1 IMG reference gene:2512954991; PFAM: EamA-like transporter family YP_353079.1 IMG reference gene:2512954992 YP_353080.1 IMG reference gene:2512954993; PFAM: Homoserine O-succinyltransferase; TIGRFAM: homoserine O-succinyltransferase YP_353081.2 IMG reference gene:2512954994; extended by 5 aa YP_353082.1 IMG reference gene:2512954995; PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate kinase 2, PA0141 family YP_353083.1 IMG reference gene:2512954996; PFAM: Bacterial regulatory proteins, tetR family YP_353084.1 IMG reference gene:2512954997; PFAM: ABC transporter; TOBE domain; TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit YP_353085.1 IMG reference gene:2512954998; PFAM: Binding-protein-dependent transport system inner membrane component YP_353086.1 IMG reference gene:2512954999; PFAM: Binding-protein-dependent transport system inner membrane component YP_353087.1 IMG reference gene:2512955000; PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II YP_353088.1 IMG reference gene:2512955001; PFAM: Domain of unknown function (DUF1127) YP_353089.1 IMG reference gene:2512955002; PFAM: Protein of unknown function (DUF1003) YP_353090.1 IMG reference gene:2512955003; PFAM: Ribosomal protein S9/S16 YP_353091.1 IMG reference gene:2512955004; PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type YP_353092.1 IMG reference gene:2512955005 YP_353093.1 IMG reference gene:2512955006; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase YP_353094.1 IMG reference gene:2512955007; PFAM: SAF domain; Oxidoreductase family, NAD-binding Rossmann fold YP_353095.1 IMG reference gene:2512955008; PFAM: NAD dependent epimerase/dehydratase family YP_008686524.1 IMG reference gene:2512955009; new gene YP_353096.1 IMG reference gene:2512955010 YP_353097.1 IMG reference gene:2512955011; PFAM: short chain dehydrogenase YP_353098.1 IMG reference gene:2512955012; PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain; Citrate lyase, alpha subunit (CitF); TIGRFAM: succinate CoA transferases YP_353099.1 IMG reference gene:2512955013; PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_353100.1 IMG reference gene:2512955014 YP_353101.1 IMG reference gene:2512955015 YP_353102.1 IMG reference gene:2512955016; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family YP_353103.1 IMG reference gene:2512955017 YP_353104.1 IMG reference gene:2512955018; PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA YP_353105.2 IMG reference gene:2512955019; PFAM: Protein of unknown function, DUF400; extended by 44 aa YP_353106.1 IMG reference gene:2512955020 YP_353107.1 IMG reference gene:2512955021; TIGRFAM: flagella basal body P-ring formation protein FlgA YP_353108.1 IMG reference gene:2512955022; PFAM: Anti-sigma-28 factor, FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor FlgM YP_353109.1 IMG reference gene:2512955023 YP_353110.1 IMG reference gene:2512955024; PFAM: Sel1 repeat YP_353111.2 IMG reference gene:2512955025 YP_353112.1 IMG reference gene:2512955026 YP_353113.1 IMG reference gene:2512955027 YP_353114.1 IMG reference gene:2512955028 YP_353115.1 IMG reference gene:2512955029; PFAM: Flagellar protein FliS YP_353116.1 IMG reference gene:2512955030 YP_353117.1 IMG reference gene:2512955031; PFAM: CheW-like domain; Hpt domain YP_353118.1 IMG reference gene:2512955032; PFAM: Response regulator receiver domain YP_353119.1 IMG reference gene:2512955033; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_353120.1 IMG reference gene:2512955034; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_353121.1 IMG reference gene:2512955035; PFAM: CheW-like domain YP_353122.1 IMG reference gene:2512955036; PFAM: CheB methylesterase; Response regulator receiver domain YP_353123.1 IMG reference gene:2512955037; PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain YP_353124.1 IMG reference gene:2512955038; PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain YP_353125.1 IMG reference gene:2512955039 YP_353126.1 IMG reference gene:2512955040; PFAM: Sigma-54 interaction domain YP_353127.1 IMG reference gene:2512955041; PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE YP_353128.1 IMG reference gene:2512955042; PFAM: Flagellar M-ring protein C-terminal; Secretory protein of YscJ/FliF family; TIGRFAM: flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) YP_353129.1 IMG reference gene:2512955043; PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG YP_353130.1 IMG reference gene:2512955044; PFAM: Flagellar assembly protein FliH YP_353131.1 IMG reference gene:2512955045; PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family YP_353132.1 IMG reference gene:2512955046 YP_353133.1 IMG reference gene:2512955047; PFAM: Flagellar hook-length control protein FliK YP_353134.1 IMG reference gene:2512955048; PFAM: Flagellar basal body-associated protein FliL YP_353135.1 IMG reference gene:2512955049; PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM YP_353136.1 IMG reference gene:2512955050; PFAM: Surface presentation of antigens (SPOA); TIGRFAM: flagellar motor switch protein FliN YP_353137.1 IMG reference gene:2512955051; PFAM: Flagellar biosynthesis protein, FliO YP_353138.1 IMG reference gene:2512955052; PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP YP_353139.1 IMG reference gene:2512955053; PFAM: Bacterial export proteins, family 3; TIGRFAM: flagellar biosynthetic protein FliQ YP_353140.1 IMG reference gene:2512955054; PFAM: Bacterial export proteins, family 1; TIGRFAM: flagellar biosynthetic protein FliR YP_353141.1 IMG reference gene:2512955055; PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flagellar biosynthetic protein FlhB YP_353142.1 IMG reference gene:2512955056 YP_353143.1 IMG reference gene:2512955057; PFAM: Protein of unknown function (DUF2628) YP_353144.2 IMG reference gene:2512955058; PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain; TIGRFAM: RNA polymerase sigma-54 factor YP_353145.1 IMG reference gene:2512955059; PFAM: Bacterial flagellin N-terminal helical region; Flagellin hook IN motif; Bacterial flagellin C-terminal helical region YP_353146.1 IMG reference gene:2512955060; PFAM: Flagellar hook-associated protein 2 C-terminus YP_353147.2 IMG reference gene:2512955061; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; truncated by 43 aa YP_353148.1 IMG reference gene:2512955062; PFAM: Transglycosylase SLT domain YP_353149.1 IMG reference gene:2512955063; PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; TIGRFAM: flagellar hook-associated protein 3 YP_353150.1 IMG reference gene:2512955064; PFAM: Flagellin hook IN motif; Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar hook-associated protein FlgK YP_353151.1 IMG reference gene:2512955065; PFAM: Rod binding protein YP_353152.2 IMG reference gene:2512955066; PFAM: Flagellar P-ring protein YP_353153.1 IMG reference gene:2512955067; PFAM: Flagellar L-ring protein YP_353154.1 IMG reference gene:2512955068; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins; flagellar basal-body rod protein FlgB; flagellar basal-body rod protein FlgG, Gram-negative bacteria YP_353155.1 IMG reference gene:2512955069; PFAM: Domain of unknown function (DUF1078); TIGRFAM: fagellar hook-basal body proteins YP_353156.1 IMG reference gene:2512955070; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); Flagellar basal body protein FlaE; TIGRFAM: fagellar hook-basal body proteins YP_353157.1 IMG reference gene:2512955071; PFAM: Flagellar hook capping protein YP_353158.1 IMG reference gene:2512955072; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC YP_353159.1 IMG reference gene:2512955073; TIGRFAM: flagellar basal-body rod protein FlgB YP_353160.1 IMG reference gene:2512955074 YP_353161.2 IMG reference gene:2512955075; PFAM: Response regulator receiver domain; His Kinase A (phospho-acceptor) domain; PAS fold; Hpt domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: PAS domain S-box; truncated by 19 aa YP_353162.1 IMG reference gene:2512955076; PFAM: Oxidoreductase molybdopterin binding domain YP_353163.1 IMG reference gene:2512955077; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_353164.1 IMG reference gene:2512955078; PFAM: Domain of unknown function (DUF892) YP_353165.1 IMG reference gene:2512955079; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_353166.1 IMG reference gene:2512955080; PFAM: Putative sugar-binding domain YP_353167.1 IMG reference gene:2512955081; PFAM: Bacterial extracellular solute-binding protein YP_353168.1 IMG reference gene:2512955082; PFAM: Binding-protein-dependent transport system inner membrane component YP_353169.1 IMG reference gene:2512955083; PFAM: Binding-protein-dependent transport system inner membrane component YP_353170.1 IMG reference gene:2512955084; PFAM: ABC transporter; TOBE domain YP_353171.1 IMG reference gene:2512955085; PFAM: short chain dehydrogenase YP_353172.1 IMG reference gene:2512955086; PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain YP_353173.1 IMG reference gene:2512955088; PFAM: Bacterial extracellular solute-binding protein, family 7 YP_353174.1 IMG reference gene:2512955089; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_353175.1 IMG reference gene:2512955090; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_353176.1 IMG reference gene:2512955091; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YP_353177.1 IMG reference gene:2512955092; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit YP_353178.1 IMG reference gene:2512955093; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Respiratory-chain NADH dehydrogenase, 49 Kd subunit; TIGRFAM: NADH dehydrogenase I, D subunit YP_353179.1 IMG reference gene:2512955094; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit YP_353180.1 IMG reference gene:2512955095; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain YP_353181.1 IMG reference gene:2512955096; PFAM: 2Fe-2S iron-sulfur cluster binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: NADH-quinone oxidoreductase, chain G YP_353182.1 IMG reference gene:2512955097; PFAM: NADH dehydrogenase YP_353183.1 IMG reference gene:2512955098; TIGRFAM: NADH-quinone oxidoreductase, chain I YP_353184.1 IMG reference gene:2512955099; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_353185.1 IMG reference gene:2512955100; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YP_353186.1 IMG reference gene:2512955101; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus YP_008686525.1 IMG reference gene:2512955102; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; old pseudo; frameshift corrected YP_353187.1 IMG reference gene:2512955103; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N YP_353188.2 IMG reference gene:2512955104; PFAM: Phospholipase D Active site motif; truncated by 15 aa YP_353189.1 IMG reference gene:2512955105 YP_353190.1 IMG reference gene:2512955106; PFAM: Cytochrome c YP_353191.1 IMG reference gene:2512955107 YP_353192.1 IMG reference gene:2512955108; PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, subunit I YP_353193.1 IMG reference gene:2512955109; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome c YP_353194.1 IMG reference gene:2512955110; PFAM: PAP2 superfamily YP_353195.1 IMG reference gene:2512955111; PFAM: Autoinducer binding domain YP_353196.1 IMG reference gene:2512955112; PFAM: Bacterial regulatory proteins, luxR family; Autoinducer binding domain YP_353197.1 IMG reference gene:2512955113; PFAM: Bacterial regulatory proteins, luxR family; Autoinducer binding domain YP_353198.1 IMG reference gene:2512955114 YP_353199.1 IMG reference gene:2512955115; PFAM: Autoinducer synthetase YP_353200.1 IMG reference gene:2512955116 YP_353201.2 IMG reference gene:2512955117; PFAM: Periplasmic glucan biosynthesis protein, MdoG YP_353202.1 IMG reference gene:2512955118 YP_353203.1 IMG reference gene:2512955119; PFAM: Glycosyl transferase family 2 YP_353204.1 IMG reference gene:2512955120; PFAM: OpgC protein YP_353205.1 IMG reference gene:2512955122; PFAM: ABC transporter; NIL domain YP_353206.1 IMG reference gene:2512955123; PFAM: Binding-protein-dependent transport system inner membrane component YP_353207.1 IMG reference gene:2512955124; PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family YP_353208.1 IMG reference gene:2512955125; PFAM: Na+/H+ antiporter family; TIGRFAM: Na+/H+ antiporter NhaC; TC 2.A.35 YP_353211.2 IMG reference gene:2512955129; PFAM: Phage integrase family; extended by 87 aa; similar to putative integrase for prophage CP-933U YP_353212.2 IMG reference gene:2512955131 YP_353213.1 IMG reference gene:2512955132 YP_353214.1 IMG reference gene:2512955134; PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6 YP_353215.1 IMG reference gene:2512955135; PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18 YP_353216.1 IMG reference gene:2512955136; PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9 YP_353217.1 IMG reference gene:2512955137; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor YP_353218.1 IMG reference gene:2512955139 YP_008686526.1 IMG reference gene:2512955140; PFAM: Carbohydrate kinase; TIGRFAM: yjeF C-terminal region, hydroxyethylthiazole kinase-related; old pseudo, mistakenly identified as pseudo based on the hits to fusion proteis YP_008686527.1 IMG reference gene:2512955141; PFAM: YjeF-related protein N-terminus; TIGRFAM: yjeF N-terminal region; old pseudo, mistakenly identified as pseudo based on the hits to fusion proteis YP_353219.1 IMG reference gene:2512955142; PFAM: Nitrogen regulatory protein P-II YP_353220.1 IMG reference gene:2512955143; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I YP_353221.1 IMG reference gene:2512955144; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain YP_353222.1 IMG reference gene:2512955145; PFAM: Response regulator receiver domain YP_353223.1 IMG reference gene:2512955146; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; CHASE3 domain YP_353224.2 IMG reference gene:2512955147; PFAM: ATPase family associated with various cellular activities (AAA); truncated by 7 aa YP_353225.1 IMG reference gene:2512955148; PFAM: Predicted metallopeptidase (DUF2201) YP_353226.1 IMG reference gene:2512955149 YP_353227.1 IMG reference gene:2512955150; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase YP_353228.1 IMG reference gene:2512955151; PFAM: Enoyl-CoA hydratase/isomerase family YP_353229.1 IMG reference gene:2512955152; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_353230.1 IMG reference gene:2512955153 YP_353231.1 IMG reference gene:2512955154; PFAM: Glycosyl hydrolase family 26 YP_353232.1 IMG reference gene:2512955155; PFAM: Glycosyl transferase family 2 YP_353233.1 IMG reference gene:2512955156; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase YP_353234.1 IMG reference gene:2512955157; PFAM: NAD dependent epimerase/dehydratase family YP_353235.2 IMG reference gene:2512955158; PFAM: Bacterial extracellular solute-binding protein; truncated by 8 aa YP_353236.1 IMG reference gene:2512955159 YP_353237.1 IMG reference gene:2512955160; PFAM: Binding-protein-dependent transport system inner membrane component YP_353238.1 IMG reference gene:2512955161; PFAM: Uncharacterized protein conserved in bacteria (DUF2312) YP_353239.1 IMG reference gene:2512955162 YP_008686528.1 IMG reference gene:2512955163; new gene YP_353240.1 IMG reference gene:2512955164; PFAM: Prokaryotic dksA/traR C4-type zinc finger YP_353241.1 IMG reference gene:2512955165; PFAM: Putative phosphatase (DUF442); TIGRFAM: TIGR01244 family protein YP_353242.1 IMG reference gene:2512955166; PFAM: Surface presentation of antigens (SPOA) YP_353243.1 IMG reference gene:2512955167; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_353244.1 IMG reference gene:2512955168 YP_353245.1 IMG reference gene:2512955169; PFAM: Response regulator receiver domain YP_353246.1 IMG reference gene:2512955170; PFAM: Helix-turn-helix; Predicted transcriptional regulator (DUF2083) YP_353247.1 IMG reference gene:2512955171; PFAM: Fumarylacetoacetate (FAA) hydrolase family YP_353248.1 IMG reference gene:2512955172; PFAM: short chain dehydrogenase YP_353249.1 IMG reference gene:2512955173; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_353250.1 IMG reference gene:2512955174; PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase YP_353251.1 IMG reference gene:2512955175; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD YP_353252.1 IMG reference gene:2512955176; PFAM: NMT1/THI5 like YP_353253.1 IMG reference gene:2512955177; PFAM: Binding-protein-dependent transport system inner membrane component YP_353254.2 IMG reference gene:2512955178; PFAM: Binding-protein-dependent transport system inner membrane component YP_353255.4 IMG reference gene:2512955180; PFAM: Amidohydrolase family; TIGRFAM: D-hydantoinase; truncated by 18 aa YP_353256.1 IMG reference gene:2512955181; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidase, hydantoinase/carbamoylase family YP_353257.1 IMG reference gene:2512955182; PFAM: Bacterial regulatory proteins, tetR family; YcdC-like protein, C-terminal region YP_353258.1 IMG reference gene:2512955183; PFAM: Bacterial regulatory proteins, tetR family; YcdC-like protein, C-terminal region YP_353259.1 IMG reference gene:2512955184; PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein YP_353260.1 IMG reference gene:2512955185; PFAM: SNARE associated Golgi protein YP_353261.1 IMG reference gene:2512955186; PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_353262.2 IMG reference gene:2512955187; PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; truncated by 46 aa YP_353263.1 IMG reference gene:2512955188; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit YP_353264.1 IMG reference gene:2512955189; PFAM: Leucyl/phenylalanyl-tRNA protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA--protein transferase YP_353265.1 IMG reference gene:2512955190; PFAM: Uncharacterized protein conserved in bacteria (DUF2155) YP_353266.1 IMG reference gene:2512955191; PFAM: mce related protein YP_353267.1 IMG reference gene:2512955192; PFAM: NADH ubiquinone oxidoreductase subunit NDUFA12 YP_353268.1 IMG reference gene:2512955193; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX) YP_353269.1 IMG reference gene:2512955194; PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP YP_353270.1 IMG reference gene:2512955195; PFAM: CDP-alcohol phosphatidyltransferase YP_353271.1 IMG reference gene:2512955196; PFAM: Bacterial extracellular solute-binding protein YP_353272.1 IMG reference gene:2512955197; PFAM: Binding-protein-dependent transport system inner membrane component YP_353273.1 IMG reference gene:2512955198; PFAM: ABC transporter YP_353274.1 IMG reference gene:2512955199; PFAM: Cysteine-rich secretory protein family YP_353275.1 IMG reference gene:2512955200; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_353276.1 IMG reference gene:2512955201; PFAM: Metallo-beta-lactamase superfamily YP_353277.2 IMG reference gene:2512955203; truncated by 49 aa YP_353278.1 IMG reference gene:2512955204 YP_353279.1 IMG reference gene:2512955205 YP_353280.1 IMG reference gene:2512955206; PFAM: Phage portal protein YP_353281.1 IMG reference gene:2512955207; PFAM: Caudovirus prohead protease; TIGRFAM: phage prohead protease, HK97 family YP_353282.2 IMG reference gene:2512955208; PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family; extended by 34 aa YP_353283.1 IMG reference gene:2512955209; PFAM: HNH endonuclease YP_353284.2 IMG reference gene:2512955210; PFAM: Phage Terminase; extended by 6 aa YP_353285.1 IMG reference gene:2512955211; PFAM: Phage QLRG family, putative DNA packaging YP_353286.1 IMG reference gene:2512955212 YP_008686529.1 IMG reference gene:2512955213; new gene YP_353287.1 IMG reference gene:2512955214 YP_008686530.1 IMG reference gene:2512955215; PFAM: Prophage CP4-57 regulatory protein (AlpA); new gene YP_353288.2 IMG reference gene:2512955216; extended by 9 aa YP_353289.1 IMG reference gene:2512955217; PFAM: Phage integrase family YP_353290.1 IMG reference gene:2512955220; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_353292.1 IMG reference gene:2512955222 YP_353293.1 IMG reference gene:2512955223 YP_353294.2 IMG reference gene:2512955224; PFAM: Tellurite resistance protein TerB YP_353295.2 IMG reference gene:2512955225; PFAM: Protein of unknown function (DUF2791); extended by 12 aa YP_353296.1 IMG reference gene:2512955226; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_353297.2 IMG reference gene:2512955229; truncated by 40 aa YP_353298.1 IMG reference gene:2512955230; PFAM: Chalcone and stilbene synthases, N-terminal domain; Chalcone and stilbene synthases, C-terminal domain YP_353299.1 IMG reference gene:2512955231; PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family YP_353300.1 IMG reference gene:2512955232; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_353301.1 IMG reference gene:2512955233; PFAM: Haemin-degrading HenS.ChuX domain YP_353302.1 IMG reference gene:2512955234; PFAM: Matrixin; Peptidase M10 serralysin C terminal YP_353303.1 IMG reference gene:2512955235 YP_353304.1 IMG reference gene:2512955236; PFAM: OmpA family YP_353305.1 IMG reference gene:2512955237; PFAM: MotA/TolQ/ExbB proton channel family YP_353306.1 IMG reference gene:2512955238; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_008686531.1 IMG reference gene:2512955239; new gene YP_353307.1 IMG reference gene:2512955240 YP_353308.1 IMG reference gene:2512955241; PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial YP_353309.1 IMG reference gene:2512955242; PFAM: FAD dependent oxidoreductase YP_353310.1 IMG reference gene:2512955243; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: acetylornithine deacetylase (ArgE) YP_353311.1 IMG reference gene:2512955244; PFAM: Protein of unknown function (DUF3422) YP_353312.1 IMG reference gene:2512955245; PFAM: NAD(P) transhydrogenase beta subunit YP_353313.1 IMG reference gene:2512955246; PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: NAD(P) transhydrogenase, alpha subunit YP_353314.2 IMG reference gene:2512955247; truncated by 28 aa YP_353315.1 IMG reference gene:2512955248; PFAM: Aminotransferase class-V; TIGRFAM: kynureninase YP_353316.1 IMG reference gene:2512955249; PFAM: L,D-transpeptidase catalytic domain YP_353317.1 IMG reference gene:2512955250; PFAM: Peptidase C26 YP_353318.1 IMG reference gene:2512955251; PFAM: Aminotransferase class-V YP_353319.1 IMG reference gene:2512955252; PFAM: ABC transporter transmembrane region; ABC transporter YP_353320.1 IMG reference gene:2512955253; PFAM: Aminomethyltransferase folate-binding domain; TIGRFAM: folate-binding protein YgfZ YP_353321.1 IMG reference gene:2512955254; PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P YP_353322.1 IMG reference gene:2512955255 YP_353323.2 IMG reference gene:2512955256 YP_353324.1 IMG reference gene:2512955257; PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family YP_353325.1 IMG reference gene:2512955258; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_353326.1 IMG reference gene:2512955259; PFAM: FAD dependent oxidoreductase YP_353327.1 IMG reference gene:2512955260; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase YP_353328.1 IMG reference gene:2512955261; PFAM: Intrinsic membrane protein PufX YP_353329.1 IMG reference gene:2512955262; PFAM: Photosynthetic reaction centre protein; TIGRFAM: photosynthetic reaction center M subunit YP_353330.1 IMG reference gene:2512955263; PFAM: Photosynthetic reaction centre protein; TIGRFAM: photosynthetic reaction center L subunit YP_353331.1 IMG reference gene:2512955264; PFAM: Antenna complex alpha/beta subunit YP_353332.1 IMG reference gene:2512955265; PFAM: Antenna complex alpha/beta subunit YP_353333.1 IMG reference gene:2512955266 YP_353334.1 IMG reference gene:2512955267; PFAM: PufQ cytochrome subunit YP_353335.1 IMG reference gene:2512955268; PFAM: Proto-chlorophyllide reductase 57 kD subunit; Nitrogenase component 1 type Oxidoreductase; TIGRFAM: chlorophyllide reductase subunit Z YP_353336.1 IMG reference gene:2512955269; PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: chlorophyllide reductase subunit Y YP_353337.1 IMG reference gene:2512955270; PFAM: 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; TIGRFAM: chlorophyllide reductase iron protein subunit X YP_353338.1 IMG reference gene:2512955271; PFAM: Alcohol dehydrogenase GroES-like domain; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase YP_353339.1 IMG reference gene:2512955272; PFAM: O-methyltransferase YP_353340.2 IMG reference gene:2512955273; PFAM: Polyprenyl synthetase YP_353341.1 IMG reference gene:2512955274; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase YP_353342.2 IMG reference gene:2512955275; PFAM: Hydroxyneurosporene synthase (CrtC); extended by 10 aa YP_353343.2 IMG reference gene:2512955276; PFAM: TspO/MBR family YP_353344.1 IMG reference gene:2512955277; PFAM: Squalene/phytoene synthase YP_353345.1 IMG reference gene:2512955278; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase YP_353346.1 IMG reference gene:2512955279 YP_353347.1 IMG reference gene:2512955280; PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: magnesium chelatase ATPase subunit I YP_353348.2 IMG reference gene:2512955281; PFAM: von Willebrand factor type A domain; TIGRFAM: magnesium chelatase ATPase subunit D YP_353349.1 IMG reference gene:2512955282; TIGRFAM: putative magnesium chelatase accessory protein YP_353350.1 IMG reference gene:2512955283; PFAM: NUDIX domain; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1 YP_353351.1 IMG reference gene:2512955284; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: geranylgeranyl reductase; geranylgeranyl reductase family YP_353352.1 IMG reference gene:2512955285; PFAM: PUCC protein YP_353353.1 IMG reference gene:2512955286; PFAM: UbiA prenyltransferase family; TIGRFAM: bacteriochlorophyll/chlorophyll synthetase YP_353354.1 IMG reference gene:2512955287; PFAM: V4R domain; TIGRFAM: bacteriochlorophyll 4-vinyl reductase YP_353355.1 IMG reference gene:2512955288; PFAM: Radical SAM superfamily; B12 binding domain; TIGRFAM: magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase YP_353356.1 IMG reference gene:2512955289; PFAM: Bacterial regulatory protein, Fis family; TIGRFAM: transcriptional regulator PpsR YP_353357.1 IMG reference gene:2512955290 YP_353358.1 IMG reference gene:2512955291; PFAM: 2-vinyl bacteriochlorophyllide hydratase (BCHF); TIGRFAM: 2-vinyl bacteriochlorophyllide hydratase YP_353359.1 IMG reference gene:2512955292; PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: light-independent protochlorophyllide reductase, N subunit YP_353360.1 IMG reference gene:2512955293; PFAM: Proto-chlorophyllide reductase 57 kD subunit; Nitrogenase component 1 type Oxidoreductase; TIGRFAM: light-independent protochlorophyllide reductase, B subunit YP_353361.1 IMG reference gene:2512955294; PFAM: Domain of unknown function (DUF3479); CobN/Magnesium Chelatase YP_353362.1 IMG reference gene:2512955295; PFAM: 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; TIGRFAM: light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein YP_353363.1 IMG reference gene:2512955296; PFAM: Methyltransferase small domain; Magnesium-protoporphyrin IX methyltransferase C-terminus; TIGRFAM: magnesium protoporphyrin O-methyltransferase YP_353364.2 IMG reference gene:2512955297; PFAM: PUCC protein YP_353365.1 IMG reference gene:2512955298; PFAM: Photosynthetic reaction centre, H-chain N-terminal region; PRC-barrel domain; TIGRFAM: photosynthetic reaction center, subunit H, bacterial YP_353366.1 IMG reference gene:2512955299 YP_353367.1 IMG reference gene:2512955300; TIGRFAM: putative photosynthetic complex assembly protein YP_353368.1 IMG reference gene:2512955301 YP_353369.1 IMG reference gene:2512955302; PFAM: Rubrerythrin; TIGRFAM: magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase YP_353370.1 IMG reference gene:2512955303; PFAM: Protein of unknown function (DUF3623); TIGRFAM: putative photosynthetic complex assembly protein 2 YP_353371.1 IMG reference gene:2512955304 YP_353372.1 IMG reference gene:2512955305; PFAM: ABC transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE YP_353373.1 IMG reference gene:2512955306; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD YP_353374.1 IMG reference gene:2512955307; PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtC YP_353375.1 IMG reference gene:2512955308; PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtB YP_353376.1 IMG reference gene:2512955309; TIGRFAM: urea ABC transporter, urea binding protein YP_353377.1 IMG reference gene:2512955310; PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: urease accessory protein UreG YP_353378.1 IMG reference gene:2512955311; PFAM: UreF YP_353379.1 IMG reference gene:2512955312; PFAM: UreE urease accessory protein, C-terminal domain; UreE urease accessory protein, N-terminal domain YP_008686532.1 IMG reference gene:2512955313; new gene; replaced RSP_0305 on the opposite strand YP_353381.1 IMG reference gene:2512955314; PFAM: Urease alpha-subunit, N-terminal domain; Amidohydrolase family; TIGRFAM: urease, alpha subunit YP_353382.1 IMG reference gene:2512955315; PFAM: Cytochrome c YP_353383.1 IMG reference gene:2512955316 YP_353384.1 IMG reference gene:2512955317; PFAM: Urease beta subunit; TIGRFAM: urease, beta subunit YP_353385.1 IMG reference gene:2512955318; PFAM: Urease, gamma subunit; TIGRFAM: urease, gamma subunit YP_353386.1 IMG reference gene:2512955319; PFAM: UreD urease accessory protein YP_353387.2 IMG reference gene:2512955320; PFAM: Phosphotransferase enzyme family; truncated by 26 aa YP_353388.1 IMG reference gene:2512955321; PFAM: Aminotransferase class-III YP_353389.1 IMG reference gene:2512955322 YP_353390.1 IMG reference gene:2512955323; PFAM:Antenna complex alpha/beta subunit YP_353391.1 IMG reference gene:2512955324; PFAM: Antenna complex alpha/beta subunit YP_353392.1 IMG reference gene:2512955325; PFAM: PUCC protein YP_353393.2 IMG reference gene:2512955326; PFAM: Bacterial regulatory proteins, luxR family; extended by 34 aa YP_353394.1 IMG reference gene:2512955327; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase YP_353395.1 IMG reference gene:2512955328; PFAM: NnrU protein YP_353396.1 IMG reference gene:2512955329 YP_353397.1 IMG reference gene:2512955330 YP_353398.1 IMG reference gene:2512955331; PFAM: von Willebrand factor type A domain YP_353399.1 IMG reference gene:2512955332; PFAM: AAA domain (dynein-related subfamily); CbbQ/NirQ/NorQ C-terminal YP_353400.1 IMG reference gene:2512955333; PFAM: Cytochrome C and Quinol oxidase polypeptide I YP_353401.1 IMG reference gene:2512955334 YP_353402.1 IMG reference gene:2512955335; TIGRFAM: hybrid cluster protein-associated redox disulfide domain YP_353403.1 IMG reference gene:2512955336; PFAM: Uncharacterized protein conserved in bacteria (DUF2087) YP_353404.1 IMG reference gene:2512955337; PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_353405.1 IMG reference gene:2512955338; PFAM: NnrS protein YP_353406.1 IMG reference gene:2512955339; PFAM: GAF domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_353409.1 IMG reference gene:2512955342; PFAM: Bacterial cellulose synthase subunit YP_353410.1 IMG reference gene:2512955343; PFAM: Glycosyl transferase family 2; PilZ domain; Cellulose synthase; TIGRFAM: cellulose synthase catalytic subunit (UDP-forming) YP_353411.1 IMG reference gene:2512955344 YP_353412.1 IMG reference gene:2512955345; PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_353413.1 IMG reference gene:2512955346; PFAM: Calcineurin-like phosphoesterase YP_353414.1 IMG reference gene:2512955347; PFAM: Diacylglycerol kinase catalytic domain YP_353415.1 IMG reference gene:2512955348; PFAM: Methyltransferase domain YP_353416.1 IMG reference gene:2512955349; PFAM: Domain of unknown function DUF20 YP_353417.1 IMG reference gene:2512955350; PFAM: Amidohydrolase family YP_353418.1 IMG reference gene:2512955351; PFAM: Branched-chain amino acid transport system / permease component YP_008686533.1 IMG reference gene:2512955352; new gene YP_353419.1 IMG reference gene:2512955353; PFAM: Branched-chain amino acid transport system / permease component YP_353420.1 IMG reference gene:2512955354; PFAM: ABC transporter YP_353421.1 IMG reference gene:2512955355; PFAM: Basic membrane protein YP_353422.1 IMG reference gene:2512955356; PFAM: Bacterial extracellular solute-binding protein YP_353423.1 IMG reference gene:2512955357 YP_353424.1 IMG reference gene:2512955358; PFAM: Binding-protein-dependent transport system inner membrane component YP_353425.1 IMG reference gene:2512955359; PFAM: ABC transporter; TOBE domain YP_353426.1 IMG reference gene:2512955360 YP_353427.2 IMG reference gene:2512955361; PFAM: Aldo/keto reductase family YP_353428.1 IMG reference gene:2512955362; PFAM: 2Fe-2S iron-sulfur cluster binding domain YP_353429.1 IMG reference gene:2512955364 YP_353430.2 IMG reference gene:2512955365; PFAM: Trypsin; TIGRFAM: periplasmic serine protease, Do/DeqQ family; extended by 52 aa YP_353431.1 IMG reference gene:2512955366; PFAM: SPFH domain / Band 7 family; TIGRFAM: HflC protein YP_353432.1 IMG reference gene:2512955367; PFAM: SPFH domain / Band 7 family; TIGRFAM: HflK protein YP_353433.1 IMG reference gene:2512955368; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: glutathione-disulfide reductase, plant YP_353434.1 IMG reference gene:2512955369; PFAM: Ribose 5-phosphate isomerase A (phosphoriboisomerase A); Bacterial regulatory proteins, deoR family; TIGRFAM: ribose 5-phosphate isomerase YP_008686534.1 IMG reference gene:2512955370; new gene; replaced RSP_0360 on the opposite strand YP_353436.1 IMG reference gene:2512955371; PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form YP_353438.1 IMG reference gene:2512955372; PFAM: EamA-like transporter family YP_353439.1 IMG reference gene:2512955373; PFAM: Thiamin pyrophosphokinase, vitamin B1 binding domain; Thiamin pyrophosphokinase, catalytic domain; TIGRFAM: thiamine pyrophosphokinase YP_008686535.1 IMG reference gene:2512955374; new gene; replaced RSP_0365 on the opposite strand YP_353441.1 IMG reference gene:2512955375; PFAM: Protein of unknown function (DUF2842) YP_353442.1 IMG reference gene:2512955376; PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase YP_353443.1 IMG reference gene:2512955377; PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit YP_353444.1 IMG reference gene:2512955378; PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase YP_353445.1 IMG reference gene:2512955379; PFAM: Protein of unknown function (DUF519) YP_353446.1 IMG reference gene:2512955380; PFAM: Tellurite resistance protein TerB YP_353447.1 IMG reference gene:2512955381; PFAM: ABC transporter YP_353448.1 IMG reference gene:2512955382; PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_353449.1 IMG reference gene:2512955383; PFAM: Binding-protein-dependent transport system inner membrane component YP_353450.1 IMG reference gene:2512955384; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_353451.1 IMG reference gene:2512955385; PFAM: Glutamine synthetase, catalytic domain YP_353452.1 IMG reference gene:2512955386; PFAM: Glutamine amidotransferase class-I YP_353453.1 IMG reference gene:2512955387; PFAM: Glutamine synthetase, catalytic domain YP_353454.1 IMG reference gene:2512955388; PFAM: FAD dependent oxidoreductase YP_353455.1 IMG reference gene:2512955389; PFAM: Aminotransferase class-III YP_353456.1 IMG reference gene:2512955390; PFAM: PHB accumulation regulatory domain; PHB/PHA accumulation regulator DNA-binding domain; TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR YP_353457.1 IMG reference gene:2512955391 YP_353458.1 IMG reference gene:2512955392; PFAM: Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus; TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I YP_353459.1 IMG reference gene:2512955393; PFAM: PHB de-polymerase C-terminus; TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular YP_353460.2 IMG reference gene:2512955394; truncated by 6 aa YP_353461.1 IMG reference gene:2512955395; PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase YP_353462.1 IMG reference gene:2512955396; PFAM: 'Cold-shock' DNA-binding domain YP_353463.1 IMG reference gene:2512955397; PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family YP_353464.1 IMG reference gene:2512955398; PFAM: Predicted membrane protein (DUF2177) YP_353465.1 IMG reference gene:2512955399; PFAM: Dihydrofolate reductase YP_353466.1 IMG reference gene:2512955400; PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase YP_353467.1 IMG reference gene:2512955401; TIGRFAM: lactoylglutathione lyase YP_353468.1 IMG reference gene:2512955402; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; RibD C-terminal domain; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD YP_353469.1 IMG reference gene:2512955403; PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR YP_353470.1 IMG reference gene:2512955404 YP_353471.1 IMG reference gene:2512955405; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 factor, region 1.1; Sigma-70, non-essential region; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain YP_353472.1 IMG reference gene:2512955406; PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core YP_353473.1 IMG reference gene:2512955407; PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YP_353474.1 IMG reference gene:2512955408 YP_353475.1 IMG reference gene:2512955409; PFAM: TadE-like protein YP_353476.1 IMG reference gene:2512955410 YP_353477.1 IMG reference gene:2512955411; PFAM: Bacterial regulatory proteins, tetR family YP_008686536.1 IMG reference gene:2512955412; new gene YP_353478.1 IMG reference gene:2512955413; PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; ACT domain YP_353479.1 IMG reference gene:2512955414; PFAM: Bacterial fructose-1,6-bisphosphatase, glpX-encoded; TIGRFAM: fructose-1,6-bisphosphatase, class II YP_353480.1 IMG reference gene:2512955415; PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ YP_353481.1 IMG reference gene:2512955417; PFAM: 5TMR of 5TMR-LYT; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_353482.1 IMG reference gene:2512955418; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_353483.1 IMG reference gene:2512955419 YP_353484.2 IMG reference gene:2512955420; PFAM: CHAD domain; truncated by 7 aa YP_353485.1 IMG reference gene:2512955421; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_353486.1 IMG reference gene:2512955422; PFAM: Heme NO binding YP_353487.1 IMG reference gene:2512955423 YP_353488.1 IMG reference gene:2512955424; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E YP_353489.1 IMG reference gene:2512955425; PFAM: Protein of unknown function (DUF3572) YP_353490.1 IMG reference gene:2512955426; PFAM: Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_353491.1 IMG reference gene:2512955427 YP_353492.1 IMG reference gene:2512955428 YP_353493.2 IMG reference gene:2512955429; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_353494.1 IMG reference gene:2512955430 YP_353495.1 IMG reference gene:2512955431; PFAM: Protein of unknown function (DUF983) YP_353496.1 IMG reference gene:2512955432; PFAM: NUDIX domain YP_353497.1 IMG reference gene:2512955433 YP_353498.1 IMG reference gene:2512955434; PFAM: Lipocalin-like domain YP_353499.1 IMG reference gene:2512955435 YP_353500.1 IMG reference gene:2512955436; PFAM: Aldo/keto reductase family YP_353501.1 IMG reference gene:2512955437 YP_353502.1 IMG reference gene:2512955438; PFAM: tRNA synthetases class I (M); TIGRFAM: methionyl-tRNA synthetase YP_353503.1 IMG reference gene:2512955439; PFAM: Sodium/hydrogen exchanger family; Cyclic nucleotide-binding domain; TC 2.A.36 YP_353504.1 IMG reference gene:2512955440 YP_353505.1 IMG reference gene:2512955441 YP_353506.1 IMG reference gene:2512955442; PFAM: ABC transporter transmembrane region; ABC transporter YP_353507.1 IMG reference gene:2512955443 YP_353508.1 IMG reference gene:2512955444; PFAM: CobD/Cbib protein; TIGRFAM: cobalamin biosynthesis protein CobD YP_353509.1 IMG reference gene:2512955445; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufSfamily YP_353510.1 IMG reference gene:2512955446; PFAM: Yip1 domain YP_353511.1 IMG reference gene:2512955447; PFAM: Yip1 domain YP_008686537.1 IMG reference gene:2512955448; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD; old pseudo; mistakenly identified as pseudo based on his to fusion proteins YP_353512.1 IMG reference gene:2512955449; PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC YP_353513.1 IMG reference gene:2512955450; PFAM: Domain of unknown function (DUF74) YP_353514.2 IMG reference gene:2512955451; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB YP_353515.1 IMG reference gene:2512955452; PFAM: Aminotransferase class-V YP_353516.1 IMG reference gene:2512955453; PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein YP_353517.1 IMG reference gene:2512955454 YP_353518.1 IMG reference gene:2512955455 YP_353519.1 IMG reference gene:2512955456; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, eukaryotic type YP_353520.1 IMG reference gene:2512955457; PFAM: Uncharacterized BCR, YitT family COG1284 YP_353521.1 IMG reference gene:2512955458; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain YP_353522.1 IMG reference gene:2512955459; PFAM: Glutamine amidotransferases class-II YP_353523.1 IMG reference gene:2512955460; PFAM: Protein of unknown function (DUF1330) YP_353524.1 IMG reference gene:2512955461; PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase YP_353525.1 IMG reference gene:2512955462; PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA YP_353526.1 IMG reference gene:2512955463 YP_353527.2 IMG reference gene:2512955464; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain YP_353528.1 IMG reference gene:2512955465; PFAM: NOL1/NOP2/sun family YP_353529.1 IMG reference gene:2512955466; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain YP_353530.1 IMG reference gene:2512955467; PFAM: RES domain YP_353531.1 IMG reference gene:2512955468; PFAM: Protein of unknown function (DUF2384) YP_353532.1 IMG reference gene:2512955469; PFAM: Protein of unknown function (DUF475) YP_008686538.1 IMG reference gene:2512955470; new gene YP_353533.1 IMG reference gene:2512955471; PFAM: AcrB/AcrD/AcrF family YP_353534.1 IMG reference gene:2512955472; TIGRFAM: RND family efflux transporter, MFP subunit YP_353535.1 IMG reference gene:2512955473 YP_353536.1 IMG reference gene:2512955474; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_353537.1 IMG reference gene:2512955475; PFAM: Peptidase family U32 YP_353538.1 IMG reference gene:2512955476; PFAM: Peptidase family U32 YP_353539.1 IMG reference gene:2512955477; PFAM: SCP-2 sterol transfer family YP_353540.1 IMG reference gene:2512955478; PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases YP_353541.1 IMG reference gene:2512955479; PFAM: Flavoprotein; TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases YP_353542.1 IMG reference gene:2512955480; PFAM: FAD dependent oxidoreductase YP_353543.1 IMG reference gene:2512955481 YP_353544.1 IMG reference gene:2512955482; PFAM: Phasin protein YP_353545.1 IMG reference gene:2512955483; PFAM: Endonuclease/Exonuclease/phosphatase family YP_353546.1 IMG reference gene:2512955484 YP_353547.1 IMG reference gene:2512955485; PFAM: Cytochrome C' YP_353548.1 IMG reference gene:2512955486; PFAM: Cytochrome b(N-terminal)/b6/petB YP_353549.1 IMG reference gene:2512955487; PFAM: Class II Aldolase and Adducin N-terminal domain YP_353550.1 IMG reference gene:2512955489 YP_353551.1 IMG reference gene:2512955490; PFAM: tRNA synthetases class II (D, K and N); TIGRFAM: EF-P lysine aminoacylase GenX YP_353552.1 IMG reference gene:2512955491; PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P YP_353553.2 IMG reference gene:2512955492; PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain; extended by 9 aa YP_353554.1 IMG reference gene:2512955493; PFAM: short chain dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase YP_353555.1 IMG reference gene:2512955494; PFAM: KduI/IolB family YP_353556.1 IMG reference gene:2512955495; PFAM: Cupin domain YP_353557.1 IMG reference gene:2512955496; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_353558.1 IMG reference gene:2512955497; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_353559.1 IMG reference gene:2512955498; PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family YP_353560.1 IMG reference gene:2512955499; PFAM: Glucuronate isomerase YP_353561.1 IMG reference gene:2512955500; PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_353563.1 IMG reference gene:2512955502; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold YP_353564.1 IMG reference gene:2512955503; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA) YP_353565.1 IMG reference gene:2512955504; PFAM: Nickel-dependent hydrogenase YP_353566.1 IMG reference gene:2512955505; PFAM: Acylphosphatase; Telomere recombination; HypF finger; TIGRFAM: [NiFe] hydrogenase maturation protein HypF YP_353567.1 IMG reference gene:2512955506; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; hydrogenase (NiFe) small subunit (hydA) YP_353568.1 IMG reference gene:2512955507; PFAM: Nickel-dependent hydrogenase YP_353569.1 IMG reference gene:2512955508; PFAM: HupE / UreJ protein YP_353571.1 IMG reference gene:2512955510; PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease YP_353572.1 IMG reference gene:2512955511; PFAM: HupF/HypC family; TIGRFAM: hydrogenase assembly chaperone HypC/HupF YP_353573.1 IMG reference gene:2512955512; PFAM: Hydrogenase-1 expression protein HyaE YP_353574.1 IMG reference gene:2512955513; PFAM: HupH hydrogenase expression protein, C-terminal conserved region YP_353575.1 IMG reference gene:2512955514; PFAM: Rubredoxin; Protein of unknown function (DUF3457); TIGRFAM: [NiFe] hydrogenase assembly chaperone, HybE family YP_353576.1 IMG reference gene:2512955515 YP_353577.1 IMG reference gene:2512955516; PFAM: Hydrogenase expression/synthesis hypA family; TIGRFAM: hydrogenase nickel insertion protein HypA YP_353578.1 IMG reference gene:2512955517; PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: hydrogenase accessory protein HypB YP_353579.1 IMG reference gene:2512955518; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_353580.1 IMG reference gene:2512955519; PFAM: HupF/HypC family; TIGRFAM: hydrogenase assembly chaperone HypC/HupF YP_353581.1 IMG reference gene:2512955520; PFAM: Hydrogenase formation hypA family; TIGRFAM: hydrogenase expression/formation protein HypD YP_353582.1 IMG reference gene:2512955521; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: hydrogenase expression/formation protein HypE YP_353583.1 IMG reference gene:2512955522; PFAM: Rhodanese-like domain YP_353584.1 IMG reference gene:2512955523; PFAM: Response regulator receiver domain YP_353585.1 IMG reference gene:2512955524; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_353586.1 IMG reference gene:2512955525; PFAM: Hemolysin-type calcium-binding repeat (2 copies); Glycosyl hydrolases family 16 YP_353587.1 IMG reference gene:2512955526; PFAM: NAD dependent epimerase/dehydratase family YP_353588.1 IMG reference gene:2512955527 YP_353589.1 IMG reference gene:2512955528 YP_353590.1 IMG reference gene:2512955529 YP_353591.1 IMG reference gene:2512955530; PFAM: Glycosyl transferases group 1 YP_353592.1 IMG reference gene:2512955531; PFAM: NAD dependent epimerase/dehydratase family YP_353593.1 IMG reference gene:2512955532; PFAM: NAD dependent epimerase/dehydratase family YP_353594.1 IMG reference gene:2512955533; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_353595.1 IMG reference gene:2512955534; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_353596.1 IMG reference gene:2512955535; PFAM: Ku70/Ku80 beta-barrel domain; TIGRFAM: Ku protein, prokaryotic YP_353597.1 IMG reference gene:2512955536; PFAM: Ku70/Ku80 beta-barrel domain; TIGRFAM: Ku protein, prokaryotic YP_353598.1 IMG reference gene:2512955537; PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family YP_353599.1 IMG reference gene:2512955538; PFAM: Protein of unknown function (DUF1810) YP_353600.1 IMG reference gene:2512955539; PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain; TIGRFAM: RNA polymerase sigma-54 factor YP_353601.1 IMG reference gene:2512955540; PFAM: Nitrogen fixation protein NifW YP_353602.2 IMG reference gene:2512955541; PFAM: HMGL-like; TIGRFAM: homocitrate synthase NifV; extended by 33 aa on 3' end due to sequence change YP_353603.2 IMG reference gene:2512955542; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS YP_353604.1 IMG reference gene:2512955543; PFAM: NifU-like N terminal domain; NifU-like domain YP_353605.1 IMG reference gene:2512955544; PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein YP_353606.1 IMG reference gene:2512955545; PFAM: NifQ YP_353607.1 IMG reference gene:2512955546; PFAM: 4Fe-4S dicluster domain; TIGRFAM: ferredoxin III, nif-specific YP_353608.1 IMG reference gene:2512955547; PFAM: Protein of unknown function, DUF269; TIGRFAM: probable nitrogen fixation protein YP_353609.1 IMG reference gene:2512955548; PFAM: Dinitrogenase iron-molybdenum cofactor; TIGRFAM: nitrogen fixation protein NifX YP_353610.1 IMG reference gene:2512955549; PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN YP_353611.1 IMG reference gene:2512955550; PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifE YP_353612.1 IMG reference gene:2512955551; PFAM: Domain of unknown function (DUF3364); Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron protein beta chain YP_353613.1 IMG reference gene:2512955552; PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase component I, alpha chain; nitrogenase molybdenum-iron protein alpha chain YP_353614.1 IMG reference gene:2512955553; PFAM: 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; TIGRFAM: nitrogenase iron protein YP_353615.1 IMG reference gene:2512955554 YP_353616.1 IMG reference gene:2512955555; PFAM: NifT/FixU protein; TIGRFAM: probable nitrogen fixation protein FixT YP_353617.1 IMG reference gene:2512955556; PFAM: NifZ domain YP_353618.1 IMG reference gene:2512955557; PFAM: LRV protein FeS4 cluster YP_008686539.1 IMG reference gene:2512955558; new gene YP_353619.1 IMG reference gene:2512955559; PFAM: Radical SAM superfamily; Dinitrogenase iron-molybdenum cofactor; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB YP_353620.1 IMG reference gene:2512955560; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: Nif-specific regulatory protein YP_353621.1 IMG reference gene:2512955561; PFAM: Rhodanese-like domain YP_353622.2 IMG reference gene:2512955562; PFAM: Sporulation related domain YP_353623.2 IMG reference gene:2512955563; PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain; extended by 44 aa YP_353624.1 IMG reference gene:2512955564; PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase YP_353625.2 IMG reference gene:2512955565; truncated by 11 aa YP_353626.1 IMG reference gene:2512955566; PFAM: Small Multidrug Resistance protein YP_353627.1 IMG reference gene:2512955567; PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit YP_353628.1 IMG reference gene:2512955568; PFAM: Peptidase family M48 YP_353629.1 IMG reference gene:2512955569; PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit YP_353630.1 IMG reference gene:2512955570; PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC YP_353631.1 IMG reference gene:2512955571; PFAM: Domain of unknown function (DUF1127) YP_353632.1 IMG reference gene:2512955572; PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase YP_353633.1 IMG reference gene:2512955573; PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase YP_353634.1 IMG reference gene:2512955574; PFAM: DEAD/DEAH box helicase; TIGRFAM: primosomal protein N' YP_353635.1 IMG reference gene:2512955575; PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family YP_353636.1 IMG reference gene:2512955576; PFAM: Protein of unknown function, DUF484 YP_353637.1 IMG reference gene:2512955577; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_353638.1 IMG reference gene:2512955578 YP_353639.1 IMG reference gene:2512955579; PFAM: CDP-alcohol phosphatidyltransferase YP_353640.1 IMG reference gene:2512955580; PFAM: EamA-like transporter family YP_353641.1 IMG reference gene:2512955581; PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase YP_353642.1 IMG reference gene:2512955582; PFAM: Protein of unknown function (DUF3253) YP_353643.1 IMG reference gene:2512955583; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Zinc finger found in FPG and IleRS; TIGRFAM: isoleucyl-tRNA synthetase YP_353644.1 IMG reference gene:2512955584; PFAM: Domain of unknown function (DUF697); TIGRFAM: TIGR01620 family protein YP_353645.1 IMG reference gene:2512955585; PFAM: YcjX-like family, DUF463 YP_353646.1 IMG reference gene:2512955586; PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I YP_353647.1 IMG reference gene:2512955587; PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family YP_353648.1 IMG reference gene:2512955588; PFAM: Response regulator receiver domain YP_353649.1 IMG reference gene:2512955589 YP_353650.1 IMG reference gene:2512955590; PFAM: Putative nucleotidyltransferase substrate binding domain; CBS domain; Cyclic nucleotide-binding domain; Putative nucleotidyltransferase DUF294 YP_353651.1 IMG reference gene:2512955591; PFAM: Sodium:solute symporter family; TIGRFAM: probable sodium:solute symporter, VC_2705 subfamily YP_353652.2 IMG reference gene:2512955592; TIGRFAM: putative solute:sodium symporter small subunit; extended by 7 aa YP_353653.2 IMG reference gene:2512955593; PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases; extended by 9 aa YP_353654.1 IMG reference gene:2512955594; PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase YP_353655.1 IMG reference gene:2512955595; PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1 YP_353656.1 IMG reference gene:2512955596; PFAM: Pyridoxamine 5'-phosphate oxidase YP_353657.1 IMG reference gene:2512955597; PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family YP_353658.1 IMG reference gene:2512955598; PFAM: Tellurite resistance protein TerB YP_353659.1 IMG reference gene:2512955599; PFAM: tRNA synthetases class I (K); TIGRFAM: lysyl-tRNA synthetase, archaeal and spirochete YP_353660.1 IMG reference gene:2512955600; PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, OsmC subfamily YP_353661.1 IMG reference gene:2512955601; PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain YP_353662.1 IMG reference gene:2512955602; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family YP_353663.1 IMG reference gene:2512955603 YP_353664.1 IMG reference gene:2512955604; PFAM: Protein of unknown function (DUF2892) YP_353665.1 IMG reference gene:2512955605; PFAM: Protein of unknown function (DUF3309) YP_353666.1 IMG reference gene:2512955606 YP_353667.1 IMG reference gene:2512955607; PFAM: 'Cold-shock' DNA-binding domain YP_353668.2 IMG reference gene:2512955608; PFAM: alpha/beta hydrolase fold YP_353669.1 IMG reference gene:2512955609; PFAM: Choline sulfatase enzyme C terminal; Sulfatase; TIGRFAM: choline-sulfatase YP_353670.1 IMG reference gene:2512955610; PFAM: Lipocalin-like domain YP_353671.1 IMG reference gene:2512955611; PFAM: Peptidase family M3 YP_353672.2 IMG reference gene:2512955612; PFAM: MoeZ/MoeB domain; ThiF family YP_353673.1 IMG reference gene:2512955613; PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) YP_353674.1 IMG reference gene:2512955614; PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic YP_353675.1 IMG reference gene:2512955615; PFAM: Protein of unknown function, DUF399 YP_353676.1 IMG reference gene:2512955616; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; alternative sigma factor RpoH YP_353677.1 IMG reference gene:2512955617; PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase YP_353678.1 IMG reference gene:2512955618; PFAM: Phosphoglycerate mutase family YP_353681.1 IMG reference gene:2512955622; PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain YP_353682.1 IMG reference gene:2512955623; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_353683.1 IMG reference gene:2512955624 YP_353684.1 IMG reference gene:2512955625 YP_353685.1 IMG reference gene:2512955626; PFAM: short chain dehydrogenase YP_353686.1 IMG reference gene:2512955627; PFAM: HxlR-like helix-turn-helix YP_353687.1 IMG reference gene:2512955628; PFAM: LysE type translocator YP_353688.1 IMG reference gene:2512955629; PFAM: Acetyltransferase (GNAT) family YP_353689.2 IMG reference gene:2512955630; extended by 25 aa YP_353690.1 IMG reference gene:2512955631; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_353691.1 IMG reference gene:2512955632; PFAM: AraC-like ligand binding domain YP_353692.2 IMG reference gene:2512955633; truncated by 94 aa YP_353694.1 IMG reference gene:2512955635; PFAM: SnoaL-like polyketide cyclase YP_353695.1 IMG reference gene:2512955636 YP_353696.1 IMG reference gene:2512955637; PFAM: Helicase conserved C-terminal domain; UvrD/REP helicase; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family YP_353697.1 IMG reference gene:2512955639; PFAM: Domain of unknown function (DUF329) YP_353698.1 IMG reference gene:2512955640; PFAM: Ribonuclease E/G family; TIGRFAM: ribonuclease, Rne/Rng family YP_353699.1 IMG reference gene:2512955641; PFAM: Maf-like protein; TIGRFAM: MAF protein YP_353700.1 IMG reference gene:2512955642; PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1 YP_353701.1 IMG reference gene:2512955643; PFAM: Carbon-nitrogen hydrolase YP_353702.1 IMG reference gene:2512955644; PFAM: Acetyltransferase (GNAT) family YP_353703.1 IMG reference gene:2512955645; TIGRFAM: conserved hypothetical protein, steroid delta-isomerase-related YP_353704.1 IMG reference gene:2512955646; PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_353705.1 IMG reference gene:2512955647; PFAM: Uncharacterised protein family (UPF0262) YP_353706.1 IMG reference gene:2512955648; PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase YP_353707.1 IMG reference gene:2512955649; PFAM: Protein of unknown function (DUF2948) YP_353708.1 IMG reference gene:2512955650; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_008686540.1 IMG reference gene:2512955651; new gene YP_353709.1 IMG reference gene:2512955653; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_353710.1 IMG reference gene:2512955654; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_353711.1 IMG reference gene:2512955655; PFAM: Bacterial extracellular solute-binding protein, family 7 YP_353712.1 IMG reference gene:2512955656; PFAM: Protein of unknown function (DUF861) YP_353713.1 IMG reference gene:2512955657; PFAM: FAD dependent oxidoreductase YP_353714.1 IMG reference gene:2512955658; PFAM: Hydantoinase B/oxoprolinase YP_353715.1 IMG reference gene:2512955659; PFAM: Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region YP_353716.1 IMG reference gene:2512955660; PFAM: Cupin domain; Helix-turn-helix YP_353717.1 IMG reference gene:2512955661; PFAM: EamA-like transporter family YP_353718.2 IMG reference gene:2512955662; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MASE1; truncated by 74 aa YP_353719.1 IMG reference gene:2512955663; PFAM: Binding-protein-dependent transport system inner membrane component YP_353720.1 IMG reference gene:2512955664; PFAM: ABC transporter YP_353721.1 IMG reference gene:2512955665; PFAM: NMT1/THI5 like YP_353722.1 IMG reference gene:2512955666; PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase YP_353723.1 IMG reference gene:2512955667; PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase YP_353724.1 IMG reference gene:2512955668; PFAM: Hydroxyethylthiazole kinase family; TIGRFAM: hydroxyethylthiazole kinase YP_353725.1 IMG reference gene:2512955669; PFAM: Transglycosylase SLT domain YP_353726.1 IMG reference gene:2512955670; PFAM: Inositol monophosphatase family YP_353727.1 IMG reference gene:2512955671; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase YP_353728.1 IMG reference gene:2512955672; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase YP_353729.1 IMG reference gene:2512955673; PFAM: EamA-like transporter family YP_353730.1 IMG reference gene:2512955674; PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family YP_353731.2 IMG reference gene:2512955675; PFAM: Citrate transporter; TrkA-C domain YP_353732.1 IMG reference gene:2512955676; TIGRFAM: metallophosphoesterase, MG_246/BB_0505 family YP_353733.1 IMG reference gene:2512955677; PFAM: Helicase conserved C-terminal domain; DEAD/H associated; DEAD/DEAH box helicase; TIGRFAM: DEXH box helicase, DNA ligase-associated YP_353734.1 IMG reference gene:2512955678; PFAM: Calcineurin-like phosphoesterase; TIGRFAM: metallophosphoesterase, DNA ligase-associated YP_353735.1 IMG reference gene:2512955679; PFAM: LytTr DNA-binding domain YP_353736.1 IMG reference gene:2512955680; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_353737.1 IMG reference gene:2512955681; PFAM: Chorismate mutase type II; TIGRFAM: chorismate mutase related enzymes YP_353738.1 IMG reference gene:2512955682; PFAM: Formate--tetrahydrofolate ligase YP_353739.2 IMG reference gene:2512955683; truncated by 93 aa YP_353740.1 IMG reference gene:2512955684; PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH YP_353741.1 IMG reference gene:2512955685; PFAM: PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, N-terminal domain YP_353742.1 IMG reference gene:2512955686; TIGRFAM: tol-pal system protein YbgF YP_353743.1 IMG reference gene:2512955687; PFAM: OmpA family; TIGRFAM: peptidoglycan-associated lipoprotein YP_353744.1 IMG reference gene:2512955688; PFAM: WD40-like Beta Propeller Repeat; TolB amino-terminal domain; TIGRFAM: tol-pal system beta propeller repeat protein TolB YP_353745.2 IMG reference gene:2512955689; extended by 1 aa due to sequence change; TC 2.C.1.2.1 YP_353746.1 IMG reference gene:2512955690; PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TolR protein; TC 2.C.1.2.1 YP_353747.1 IMG reference gene:2512955691; PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: TolQ protein; TC 2.C.1.2.1 YP_353748.1 IMG reference gene:2512955692; PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; tol-pal system-associated acyl-CoA thioesterase YP_353749.2 IMG reference gene:2512955693; truncated by 6 aa YP_353750.1 IMG reference gene:2512955694 YP_353751.1 IMG reference gene:2512955695; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family YP_353752.1 IMG reference gene:2512955696 YP_353753.1 IMG reference gene:2512955697; PFAM: Membrane transport protein YP_353754.1 IMG reference gene:2512955698; PFAM: Predicted membrane protein (DUF2339) YP_353755.1 IMG reference gene:2512955699 YP_353756.2 IMG reference gene:2512955700; PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase; extended by 8 aa YP_353757.1 IMG reference gene:2512955701; PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase YP_353758.2 IMG reference gene:2512955702; extended by 25 aa YP_353759.1 IMG reference gene:2512955703; PFAM: Coproporphyrinogen III oxidase YP_353760.1 IMG reference gene:2512955704 YP_353761.1 IMG reference gene:2512955705; PFAM: short chain dehydrogenase YP_353762.1 IMG reference gene:2512955706; PFAM: Methyltransferase small domain YP_353763.2 IMG reference gene:2512955707; PFAM: ATP-dependent Clp protease adaptor protein ClpS; extended by 7 aa YP_353764.1 IMG reference gene:2512955708; PFAM: haloacid dehalogenase-like hydrolase YP_353765.2 IMG reference gene:2512955709; PFAM: D-alanyl-D-alanine carboxypeptidase; truncated by 25 aa YP_353766.1 IMG reference gene:2512955710; PFAM: Cytochrome oxidase maturation protein cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type YP_353767.1 IMG reference gene:2512955711; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase YP_353768.1 IMG reference gene:2512955712; PFAM: FixH YP_353769.1 IMG reference gene:2512955713; PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG YP_353770.1 IMG reference gene:2512955714; PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III YP_353771.1 IMG reference gene:2512955715; PFAM: Cbb3-type cytochrome oxidase component FixQ YP_353772.1 IMG reference gene:2512955716; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II YP_353773.1 IMG reference gene:2512955717; PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I YP_353774.1 IMG reference gene:2512955718; PFAM: Universal stress protein family YP_353775.1 IMG reference gene:2512955719; PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_353776.1 IMG reference gene:2512955720; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase YP_353777.1 IMG reference gene:2512955721; PFAM: Domain of unknown function (DUF3495); Glycosyl transferases group 1 YP_353778.1 IMG reference gene:2512955722; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region YP_353779.1 IMG reference gene:2512955723; PFAM: Binding-protein-dependent transport system inner membrane component YP_353780.1 IMG reference gene:2512955724; PFAM: Binding-protein-dependent transport system inner membrane component YP_353781.1 IMG reference gene:2512955725; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_353782.1 IMG reference gene:2512955726; PFAM: Cytochrome c YP_353783.2 IMG reference gene:2512955727; PFAM: Prephenate dehydratase; truncated by 23 aa YP_353784.1 IMG reference gene:2512955728; PFAM: Polyketide cyclase / dehydrase and lipid transport YP_353785.1 IMG reference gene:2512955729; PFAM: NADH pyrophosphatase zinc ribbon domain; NUDIX domain; NADH pyrophosphatase-like rudimentary NUDIX domain YP_353786.1 IMG reference gene:2512955730; PFAM: Calcineurin-like phosphoesterase; 5'-nucleotidase, C-terminal domain; TIGRFAM: 2',3'-cyclic-nucleotide 2'-phosphodiesterase YP_353787.1 IMG reference gene:2512955732; PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; DNA polymerase III gamma and tau subunits C terminal; TIGRFAM: DNA polymerase III, subunit gamma and tau YP_353788.1 IMG reference gene:2512955733; PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family YP_353789.1 IMG reference gene:2512955734; PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR YP_353790.2 IMG reference gene:2512955735; PFAM: OpgC protein; truncated by 24 aa YP_353791.1 IMG reference gene:2512955736; PFAM: Protein of unknown function (DUF1013) YP_353792.1 IMG reference gene:2512955737; PFAM: Ribonuclease T2 family YP_353793.1 IMG reference gene:2512955738; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative NAD(P)H quinone oxidoreductase, PIG3 family YP_353794.1 IMG reference gene:2512955739; PFAM: COQ9; TIGRFAM: rpsU-divergently transcribed protein YP_353795.1 IMG reference gene:2512955740; PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21 YP_353796.1 IMG reference gene:2512955741; PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor-related protein YP_353797.1 IMG reference gene:2512955742; PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase YP_353798.1 IMG reference gene:2512955743; PFAM: Methyltransferase domain YP_353799.1 IMG reference gene:2512955744; PFAM: AsnC family YP_353800.1 IMG reference gene:2512955745; PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase YP_353801.1 IMG reference gene:2512955747; PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein YP_353802.1 IMG reference gene:2512955748; PFAM: AhpC/TSA family YP_353803.1 IMG reference gene:2512955749; PFAM: Lyase; TIGRFAM: argininosuccinate lyase YP_008686541.1 IMG reference gene:2512955750; new gene YP_353804.1 IMG reference gene:2512955751 YP_353805.1 IMG reference gene:2512955752; PFAM: Protein of unknown function (DUF2834) YP_353806.1 IMG reference gene:2512955753; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase YP_353807.1 IMG reference gene:2512955754; TIGRFAM: TIGR02302 family protein YP_353808.2 IMG reference gene:2512955755; TIGRFAM: MJ0042 family finger-like domain; frameshift eliminated due to sequence change; joined gene, RSP_0731, RSP_0732 YP_353810.1 IMG reference gene:2512955756; PFAM: ABC transporter YP_353811.1 IMG reference gene:2512955757; PFAM: Predicted permease YP_353812.1 IMG reference gene:2512955758; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_353813.1 IMG reference gene:2512955759; PFAM: Acetyltransferase (GNAT) family YP_353814.1 IMG reference gene:2512955760; PFAM: Molybdopterin guanine dinucleotide synthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein MobB YP_353815.1 IMG reference gene:2512955761; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial YP_353816.1 IMG reference gene:2512955762; PFAM: AzlC protein YP_353817.1 IMG reference gene:2512955763; PFAM: Branched-chain amino acid transport protein (AzlD) YP_353818.1 IMG reference gene:2512955764 YP_353819.1 IMG reference gene:2512955765; PFAM: Bacterial aa3 type cytochrome c oxidase subunit IV YP_353820.1 IMG reference gene:2512955766; PFAM: Metallo-beta-lactamase superfamily YP_353821.1 IMG reference gene:2512955767; PFAM: Acyl-CoA dehydrogenase N terminal; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_353822.1 IMG reference gene:2512955768; PFAM: yrdC domain; SUA5 domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein YP_353823.1 IMG reference gene:2512955769; PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I YP_353824.2 IMG reference gene:2512955770; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_353825.1 IMG reference gene:2512955771; PFAM: short chain dehydrogenase; TIGRFAM: acetoacetyl-CoA reductase YP_008686542.1 IMG reference gene:2512955772; PFAM: Protein of unknown function (DUF465); new gene YP_353826.1 IMG reference gene:2512955773; PFAM: Methyltransferase small domain YP_353827.1 IMG reference gene:2512955774; PFAM: Protein of unknown function (DUF2007) YP_353828.1 IMG reference gene:2512955775; PFAM: Polyprenyl synthetase YP_353829.2 IMG reference gene:2512955776; PFAM: Protein of unknown function (DUF1052); truncated by 12 aa YP_353830.1 IMG reference gene:2512955777 YP_353831.1 IMG reference gene:2512955778; PFAM: Acetyltransferase (GNAT) family YP_353832.1 IMG reference gene:2512955781; PFAM: Protein of unknown function, DUF481 YP_353833.1 IMG reference gene:2512955782 YP_353834.2 IMG reference gene:2512955783; PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB YP_353835.1 IMG reference gene:2512955784; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase YP_353836.1 IMG reference gene:2512955785; PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_353837.1 IMG reference gene:2512955787 YP_353838.1 IMG reference gene:2512955788; PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit YP_353839.1 IMG reference gene:2512955789; PFAM: Polysaccharide biosynthesis/export protein YP_353840.2 IMG reference gene:2512955790; truncated by 4 aa YP_353841.1 IMG reference gene:2512955791; PFAM: Protein of unknown function (DUF339) YP_353842.1 IMG reference gene:2512955792 YP_353843.1 IMG reference gene:2512955793; PFAM: Aminotransferase class I and II YP_353844.1 IMG reference gene:2512955794; PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_353845.1 IMG reference gene:2512955795 YP_353846.1 IMG reference gene:2512955796; PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate kinase 2, PA0141 family YP_353847.2 IMG reference gene:2512955797; PFAM: Bacterial regulatory proteins, luxR family; frameshift eliminated due to sequence change; joined gene, RSP_6131, RSP_0768 YP_353849.1 IMG reference gene:2512955798; PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain YP_353850.2 IMG reference gene:2512955799; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA topoisomerase IV, B subunit, proteobacterial; truncated by 12 aa YP_353851.1 IMG reference gene:2512955800; PFAM: D-mannonate dehydratase (UxuA); TIGRFAM: mannonate dehydratase YP_353852.1 IMG reference gene:2512955801; PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region YP_353853.2 IMG reference gene:2512955802 YP_353854.1 IMG reference gene:2512955803; PFAM: ABC transporter YP_353855.1 IMG reference gene:2512955804; PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family YP_353856.1 IMG reference gene:2512955805; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II YP_353857.2 IMG reference gene:2512955806; PFAM: Domain of unknown function DUF20; truncated by 17 aa YP_353858.1 IMG reference gene:2512955807; PFAM: Bacterial dnaA protein YP_353859.1 IMG reference gene:2512955808; PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1 YP_353860.1 IMG reference gene:2512955809; PFAM: Ppx/GppA phosphatase family; TIGRFAM: exopolyphosphatase YP_353861.1 IMG reference gene:2512955810 YP_353862.1 IMG reference gene:2512955811; PFAM: Acetyltransferase (GNAT) family YP_353863.1 IMG reference gene:2512955812; PFAM: DnaJ domain; Tellurite resistance protein TerB YP_353864.1 IMG reference gene:2512955813; PFAM: Endonuclease/Exonuclease/phosphatase family YP_353865.1 IMG reference gene:2512955814 YP_353866.2 IMG reference gene:2512955815 YP_353867.1 IMG reference gene:2512955816; PFAM: Aminotransferase class I and II; TIGRFAM: L-threonine-O-3-phosphate decarboxylase YP_353868.1 IMG reference gene:2512955817; PFAM: Radical SAM superfamily; TIGRFAM: coenzyme PQQ biosynthesis enzyme PqqE; radical SAM additional 4Fe4S-binding domain YP_353869.1 IMG reference gene:2512955818; PFAM: Coenzyme PQQ synthesis protein D (PqqD); TIGRFAM: coenzyme PQQ biosynthesis protein PqqD YP_353870.1 IMG reference gene:2512955819; PFAM: TENA/THI-4/PQQC family; TIGRFAM: coenzyme PQQ biosynthesis protein C YP_353871.1 IMG reference gene:2512955820; TIGRFAM: coenzyme PQQ biosynthesis protein B YP_353872.1 IMG reference gene:2512955821; PFAM: PqqA family; TIGRFAM: coenzyme PQQ precursor peptide PqqA YP_353873.2 IMG reference gene:2512955822; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; truncated by 58 aa YP_353874.1 IMG reference gene:2512955823; PFAM: YCII-related domain YP_353875.1 IMG reference gene:2512955824; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyric acid synthase CobQ YP_353876.1 IMG reference gene:2512955825 YP_353877.1 IMG reference gene:2512955826; PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family YP_353878.1 IMG reference gene:2512955827; PFAM: Domain of unknown function (DUF1025) YP_353879.1 IMG reference gene:2512955828; PFAM: Metallo-beta-lactamase superfamily YP_353880.1 IMG reference gene:2512955829; PFAM: Uncharacterised ACR, YggU family COG1872 YP_353881.1 IMG reference gene:2512955830; PFAM: Histone deacetylase domain YP_353882.1 IMG reference gene:2512955831; PFAM: Membrane dipeptidase (Peptidase family M19) YP_353883.1 IMG reference gene:2512955832; PFAM: ABC transporter YP_353884.1 IMG reference gene:2512955833; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region YP_353885.1 IMG reference gene:2512955834; PFAM: Binding-protein-dependent transport system inner membrane component YP_353886.1 IMG reference gene:2512955835; PFAM: Binding-protein-dependent transport system inner membrane component YP_353887.2 IMG reference gene:2512955836; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; truncated by 9 aa YP_353888.2 IMG reference gene:2512955837; PFAM: Nitroreductase family YP_353889.1 IMG reference gene:2512955838 YP_353890.1 IMG reference gene:2512955839; PFAM: Protein of unknown function (DUF1467) YP_353891.1 IMG reference gene:2512955840; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: methylmalonyl-CoA epimerase YP_353892.1 IMG reference gene:2512955841; PFAM: Response regulator receiver domain YP_353893.1 IMG reference gene:2512955842; PFAM: Acetyltransferase (GNAT) family YP_353894.1 IMG reference gene:2512955843; PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type YP_353895.2 IMG reference gene:2512955844; PFAM: Aminotransferase class IV; extended by 19 aa YP_353896.2 IMG reference gene:2512955845; PFAM: chorismate binding enzyme; TIGRFAM: aminodeoxychorismate synthase, component I, bacterial clade; truncated by 9 aa YP_353897.4 IMG reference gene:2512955846; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; truncated by 4 aa YP_353898.1 IMG reference gene:2512955847; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_353899.1 IMG reference gene:2512955848 YP_353900.1 IMG reference gene:2512955849; PFAM: Prokaryotic cytochrome b561 YP_353901.1 IMG reference gene:2512955850 YP_353902.1 IMG reference gene:2512955851 YP_353903.1 IMG reference gene:2512955852; PFAM: Serine hydroxymethyltransferase YP_353904.1 IMG reference gene:2512955853; PFAM: ATP-NAD kinase YP_353905.1 IMG reference gene:2512955854; PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase YP_353906.1 IMG reference gene:2512955855; PFAM: Antibiotic biosynthesis monooxygenase YP_353907.1 IMG reference gene:2512955856; PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form YP_353908.1 IMG reference gene:2512955857; PFAM: Major Facilitator Superfamily YP_353909.1 IMG reference gene:2512955858; PFAM: FMN-dependent dehydrogenase YP_353910.1 IMG reference gene:2512955859; PFAM: CBS domain; HPP family YP_353911.1 IMG reference gene:2512955860; PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit YP_353913.1 IMG reference gene:2512955861; PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF YP_353914.1 IMG reference gene:2512955862; PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_353915.1 IMG reference gene:2512955863; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YP_353916.1 IMG reference gene:2512955864 YP_353917.1 IMG reference gene:2512955865; PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family; uncharacterized flavoprotein, PP_4765 family YP_353918.1 IMG reference gene:2512955866 YP_353919.1 IMG reference gene:2512955867; PFAM: DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, delta subunit YP_353920.1 IMG reference gene:2512955868; PFAM: Predicted secreted (periplasmic) protein (DUF2159) YP_353921.1 IMG reference gene:2512955869; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family YP_353922.2 IMG reference gene:2512955870; PFAM: Domain of unknown function (DUF3576) YP_353923.1 IMG reference gene:2512955871 YP_353926.1 IMG reference gene:2512955873; PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family YP_353927.1 IMG reference gene:2512955874; PFAM: L,D-transpeptidase catalytic domain YP_353928.1 IMG reference gene:2512955875; PFAM: GTP cyclohydrolase II; TIGRFAM: GTP cyclohydrolase II YP_353929.1 IMG reference gene:2512955876; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_353930.1 IMG reference gene:2512955877; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth) YP_353931.1 IMG reference gene:2512955878; PFAM: Bacterial regulatory proteins, tetR family YP_353932.1 IMG reference gene:2512955879 YP_353933.1 IMG reference gene:2512955880; PFAM: VIT family; Rubrerythrin YP_353934.1 IMG reference gene:2512955881; PFAM: Membrane transport protein YP_353935.1 IMG reference gene:2512955882; PFAM: Putative esterase; TIGRFAM: S-formylglutathione hydrolase YP_353936.1 IMG reference gene:2512955883; PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671 YP_353937.1 IMG reference gene:2512955884; PFAM: Ornithine cyclodeaminase/mu-crystallin family YP_353938.1 IMG reference gene:2512955885; PFAM: Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) YP_353939.1 IMG reference gene:2512955886; PFAM: Protein of unknown function (DUF3419) YP_353940.1 IMG reference gene:2512955887 YP_353941.1 IMG reference gene:2512955889; PFAM: EamA-like transporter family YP_353942.4 IMG reference gene:2512955890; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; extended by 18 aa YP_353943.1 IMG reference gene:2512955891 YP_353944.1 IMG reference gene:2512955892 YP_353945.1 IMG reference gene:2512955893; PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit YP_353946.1 IMG reference gene:2512955894 YP_353947.1 IMG reference gene:2512955895; PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit YP_008686543.1 IMG reference gene:2512955896; new gene YP_353948.2 IMG reference gene:2512955897; PFAM: SOUL heme-binding protein; truncated by 18 aa YP_353949.1 IMG reference gene:2512955898; PFAM: Oligomerisation domain; TIGRFAM: iojap-like ribosome-associated protein YP_353950.1 IMG reference gene:2512955899; PFAM: Predicted SPOUT methyltransferase; TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH YP_353951.2 IMG reference gene:2512955900; PFAM: RNase H; truncated by 24 aa YP_353952.1 IMG reference gene:2512955901 YP_353953.1 IMG reference gene:2512955902; PFAM: Response regulator receiver domain YP_353954.1 IMG reference gene:2512955903 YP_353955.1 IMG reference gene:2512955904; PFAM: Aminotransferase class I and II YP_353956.1 IMG reference gene:2512955905; PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase YP_353957.1 IMG reference gene:2512955906; PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase YP_353958.1 IMG reference gene:2512955907; PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase YP_353959.1 IMG reference gene:2512955908; PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase YP_353960.1 IMG reference gene:2512955909; PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: chromosome segregation protein SMC, common bacterial type YP_353961.1 IMG reference gene:2512955910; PFAM: Acetyltransferase (GNAT) family YP_353962.1 IMG reference gene:2512955911; PFAM: EamA-like transporter family YP_353963.1 IMG reference gene:2512955912; PFAM: Protein of unknown function (DUF752) YP_353964.1 IMG reference gene:2512955913; PFAM: FAD dependent oxidoreductase YP_353965.1 IMG reference gene:2512955914; PFAM: Transglycosylase SLT domain YP_353966.2 IMG reference gene:2512955915; PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase; truncated by 5 aa YP_353967.1 IMG reference gene:2512955916; PFAM: SmpB protein; TIGRFAM: SsrA-binding protein YP_353968.1 IMG reference gene:2512955917; PFAM: Rhodanese-like domain YP_353969.1 IMG reference gene:2512955918; PFAM: Aminotransferase class I and II YP_353970.1 IMG reference gene:2512955919; PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter; TC 1.A.11 YP_353971.1 IMG reference gene:2512955920; PFAM: Nitrogen regulatory protein P-II YP_353972.2 IMG reference gene:2512955921; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family YP_353973.1 IMG reference gene:2512955922; PFAM: Toluene tolerance, Ttg2 YP_353974.1 IMG reference gene:2512955923; PFAM: VacJ like lipoprotein YP_353975.1 IMG reference gene:2512955924; PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: type I secretion system ABC transporter, PrtD family YP_353976.1 IMG reference gene:2512955925; PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family YP_353977.1 IMG reference gene:2512955926; PFAM: Endoribonuclease L-PSP YP_353978.1 IMG reference gene:2512955927; PFAM: Glycerophosphoryl diester phosphodiesterase family YP_353979.2 IMG reference gene:2512955928; PFAM: Protein of unknown function, DUF482; trucated by 22 aa YP_353980.2 IMG reference gene:2512955929; PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain YP_353981.1 IMG reference gene:2512955930; PFAM: Pterin 4 alpha carbinolamine dehydratase YP_353982.1 IMG reference gene:2512955931; PFAM: Redoxin YP_353983.1 IMG reference gene:2512955932; PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_353984.1 IMG reference gene:2512955933; PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family YP_353985.1 IMG reference gene:2512955934; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_353986.1 IMG reference gene:2512955935; PFAM: Catalase YP_353987.1 IMG reference gene:2512955936; PFAM: Periplasmic solute binding protein family YP_353988.1 IMG reference gene:2512955937; PFAM: ABC transporter YP_353989.1 IMG reference gene:2512955938; PFAM: ABC 3 transport family YP_353990.1 IMG reference gene:2512955939; PFAM: ABC 3 transport family YP_353991.1 IMG reference gene:2512955940; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_353992.1 IMG reference gene:2512955941; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_353993.1 IMG reference gene:2512955942; PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family YP_353994.1 IMG reference gene:2512955943; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_353995.1 IMG reference gene:2512955944; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_353996.1 IMG reference gene:2512955945; PFAM: Enoyl-CoA hydratase/isomerase family YP_353997.1 IMG reference gene:2512955946; PFAM: short chain dehydrogenase YP_353998.1 IMG reference gene:2512955947; PFAM: Uncharacterized protein conserved in bacteria (DUF2125) YP_353999.1 IMG reference gene:2512955948; PFAM: Putative modulator of DNA gyrase YP_354000.1 IMG reference gene:2512955949; PFAM: Inositol monophosphatase family YP_354001.1 IMG reference gene:2512955950 YP_354002.1 IMG reference gene:2512955951; PFAM: short chain dehydrogenase YP_354003.1 IMG reference gene:2512955952; PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: tonB-system energizer ExbB; TC 2.C.1.1.1 YP_354004.1 IMG reference gene:2512955953; PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TonB system transport protein ExbD, group 1; TC 2.C.1.1.1 YP_354005.1 IMG reference gene:2512955954; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; TC 2.C.1.1.1 YP_354006.2 IMG reference gene:2512955955; PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I YP_354007.1 IMG reference gene:2512955956; PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain YP_354008.1 IMG reference gene:2512955957; PFAM: Acetyltransferase (GNAT) family YP_354009.1 IMG reference gene:2512955958; PFAM: OmpA family YP_354010.2 IMG reference gene:2512955959; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; truncated by 12 aa YP_008686544.1 IMG reference gene:2512955960; new gene YP_354011.1 IMG reference gene:2512955961 YP_354012.1 IMG reference gene:2512955962; PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit YP_354013.1 IMG reference gene:2512955963; PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase YP_354014.1 IMG reference gene:2512955964; PFAM: NUDIX domain YP_354015.1 IMG reference gene:2512955965; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc) YP_354016.1 IMG reference gene:2512955966; PFAM: Peptidase family M23 YP_354017.1 IMG reference gene:2512955967; PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase YP_354018.1 IMG reference gene:2512955968; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; radical SAM methylthiotransferase, MiaB/RimO family YP_354019.2 IMG reference gene:2512955969; PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase YP_354020.1 IMG reference gene:2512955971; PFAM: Alpha amylase, catalytic domain; TIGRFAM: trehalose synthase YP_354021.1 IMG reference gene:2512955972 YP_354022.1 IMG reference gene:2512955974; PFAM: Protein of unknown function DUF72 YP_354023.1 IMG reference gene:2512955975; PFAM: NMT1/THI5 like YP_354024.1 IMG reference gene:2512955976; PFAM: ABC transporter YP_354025.1 IMG reference gene:2512955977; PFAM: Binding-protein-dependent transport system inner membrane component YP_354026.2 IMG reference gene:2512955978; PFAM: Aminotransferase class-III YP_354027.1 IMG reference gene:2512955979; PFAM: ACT domain; Formyl transferase; TIGRFAM: formyltetrahydrofolate deformylase YP_354028.1 IMG reference gene:2512955980; PFAM: Bacterial protein of unknown function (DUF894) YP_354029.1 IMG reference gene:2512955981; PFAM: Eukaryotic DNA topoisomerase I, catalytic core YP_354030.1 IMG reference gene:2512955982; PFAM: Protein of unknwon function (DUF3008) YP_354031.1 IMG reference gene:2512955983 YP_354032.1 IMG reference gene:2512955984; PFAM: Glycosyltransferase family 20; TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming] YP_354033.1 IMG reference gene:2512955985; PFAM: Trehalose-phosphatase; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB YP_354034.1 IMG reference gene:2512955986; PFAM: Peptidase family M20/M25/M40 YP_008686545.1 IMG reference gene:2512955987; new gene; replaced RSP_0951 on the opposite strand YP_354036.1 IMG reference gene:2512955988; PFAM: Transglutaminase-like superfamily; Bacterial transglutaminase-like N-terminal region YP_354037.1 IMG reference gene:2512955989; PFAM: Bacterial domain of unknown function (DUF403); Domain of unknown function (DUF404); Domain of unknown function (DUF407) YP_354038.1 IMG reference gene:2512955990; PFAM: Transglutaminase-like superfamily; Bacterial transglutaminase-like N-terminal region; Putative amidoligase enzyme (DUF2126) YP_354039.1 IMG reference gene:2512955991; PFAM: Calcineurin-like phosphoesterase; 5'-nucleotidase, C-terminal domain YP_354040.1 IMG reference gene:2512955992; PFAM: Protein of unknown function (DUF952) YP_354041.1 IMG reference gene:2512955993; PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase, subfamily 2 YP_354042.1 IMG reference gene:2512955994; PFAM: AsnC family YP_354043.2 IMG reference gene:2512955995; truncated by 58 aa YP_008686546.1 IMG reference gene:2512955996; new gene YP_354044.1 IMG reference gene:2512955997; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: crotonyl-CoA reductase YP_354045.1 IMG reference gene:2512955998; PFAM: Methylmalonyl-CoA mutase; B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; methylmalonyl-CoA mutase C-terminal domain YP_354046.1 IMG reference gene:2512955999; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase YP_354047.1 IMG reference gene:2512956000; PFAM: MAPEG family YP_354048.2 IMG reference gene:2512956001; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) YP_354049.3 IMG reference gene:2512956002; PFAM: Dehydrogenase E1 component; Transketolase, pyrimidine binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component YP_354050.1 IMG reference gene:2512956003; PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit YP_354051.1 IMG reference gene:2512956004; PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit YP_354052.4 IMG reference gene:2512956005; PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: malate dehydrogenase, NAD-dependent; truncated by 18 aa YP_354053.1 IMG reference gene:2512956006; PFAM: Sulfite exporter TauE/SafE YP_354054.1 IMG reference gene:2512956007; PFAM: HpcH/HpaI aldolase/citrate lyase family YP_354055.1 IMG reference gene:2512956008; PFAM: NnrU protein YP_354056.1 IMG reference gene:2512956009; PFAM: Domain of unknown function (DUF1737) YP_354057.1 IMG reference gene:2512956010; PFAM: MaoC like domain YP_354058.1 IMG reference gene:2512956011; PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit YP_354059.1 IMG reference gene:2512956012; PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit YP_354060.1 IMG reference gene:2512956013; PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup YP_354061.1 IMG reference gene:2512956014 YP_354062.1 IMG reference gene:2512956015 YP_354063.1 IMG reference gene:2512956016; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_354064.1 IMG reference gene:2512956017 YP_354065.2 IMG reference gene:2512956018; PFAM: Bacterial regulatory proteins, gntR family; FCD domain; truncated by 12 aa YP_354066.1 IMG reference gene:2512956019; PFAM: Protein of unknown function DUF45 YP_354067.2 IMG reference gene:2512956020; PFAM: Protein of unknown function (FYDLN_acid); TIGRFAM: TIGR02300 family protein; truncated by 15 aa YP_354068.1 IMG reference gene:2512956022; PFAM: Rickettsia 17 kDa surface antigen YP_354069.1 IMG reference gene:2512956023; PFAM: Amidohydrolase family; TIGRFAM: adenine deaminase YP_354070.2 IMG reference gene:2512956024; PFAM: EamA-like transporter family; truncated by 12 aa YP_354071.1 IMG reference gene:2512956025; PFAM: Phosphoribulokinase / Uridine kinase family YP_354072.1 IMG reference gene:2512956026; PFAM: ABC transporter YP_354073.1 IMG reference gene:2512956027; PFAM: Branched-chain amino acid transport system / permease component YP_354074.1 IMG reference gene:2512956028; PFAM: family YP_354075.1 IMG reference gene:2512956029; PFAM: ROK family YP_354076.1 IMG reference gene:2512956030; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; Domain related to MnhB subunit of Na+/H+ antiporter; TC 2.A.63.1.1 YP_354077.1 IMG reference gene:2512956031; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; TC 2.A.63.1.1 YP_354078.1 IMG reference gene:2512956032; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TC 2.A.63.1.1 YP_354079.1 IMG reference gene:2512956033; PFAM: Na+/H+ ion antiporter subunit; TC 2.A.63.1.1 YP_354080.1 IMG reference gene:2512956034; PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF); TC 2.A.63.1.1 YP_354081.1 IMG reference gene:2512956035; PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; TC 2.A.63.1.1 YP_354082.1 IMG reference gene:2512956036; PFAM: Citrate transporter; TC 2.A.62 YP_354083.1 IMG reference gene:2512956037; PFAM: Uncharacterized ACR, COG1678 YP_354084.1 IMG reference gene:2512956038 YP_354085.1 IMG reference gene:2512956039; PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4 YP_354086.1 IMG reference gene:2512956040; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase YP_354087.1 IMG reference gene:2512956041; PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type YP_354088.1 IMG reference gene:2512956042; PFAM: Domain of unknown function (DUF205); TIGRFAM: acyl-phosphate glycerol 3-phosphate acyltransferase YP_354089.1 IMG reference gene:2512956043; PFAM: Glutamate-cysteine ligase family 2(GCS2); TIGRFAM: glutamate--cysteine ligase, plant type YP_354090.1 IMG reference gene:2512956044 YP_354091.1 IMG reference gene:2512956045; PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family YP_354092.1 IMG reference gene:2512956046; PFAM: UbiA prenyltransferase family; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase, proteobacterial YP_354093.1 IMG reference gene:2512956047; PFAM: Putative phospholipid-binding domain; OmpA family YP_354094.1 IMG reference gene:2512956048 YP_354095.1 IMG reference gene:2512956049; PFAM: alpha/beta hydrolase fold YP_354096.2 IMG reference gene:2512956050; PFAM: Aldehyde dehydrogenase family; TIGRFAM: succinate-semialdehyde dehydrogenase; truncated by 19 aa YP_354097.1 IMG reference gene:2512956051; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain YP_354098.1 IMG reference gene:2512956052; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_354099.1 IMG reference gene:2512956053; PFAM: von Willebrand factor; von Willebrand factor type A domain; Domain of unknown function (DUF3520) YP_354100.1 IMG reference gene:2512956054; PFAM: Hsp20/alpha crystallin family YP_354101.2 IMG reference gene:2512956055; PFAM: Trypsin; truncated by 6 aa YP_354102.1 IMG reference gene:2512956056; PFAM: Cysteine-rich domain YP_354103.1 IMG reference gene:2512956057; PFAM: FAD binding domain YP_354104.1 IMG reference gene:2512956058; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD YP_354105.1 IMG reference gene:2512956059; PFAM: Protein of unknown function, DUF599 YP_354106.2 IMG reference gene:2512956060; PFAM: Protein of unknown function (DUF1355) YP_354107.1 IMG reference gene:2512956061; PFAM: Aerotolerance regulator N-terminal; TIGRFAM: N-terminal double-transmembrane domain YP_354108.1 IMG reference gene:2512956062; PFAM: Protein of unknown function DUF58 YP_354109.1 IMG reference gene:2512956063; PFAM: ATPase family associated with various cellular activities (AAA) YP_354110.1 IMG reference gene:2512956064; PFAM: Protein of unknown function (DUF1285) YP_354111.1 IMG reference gene:2512956065; PFAM: Protein of unknown function (DUF2798) YP_354112.2 IMG reference gene:2512956066; PFAM: Zinc-finger domain; truncated by 13 aa YP_354113.1 IMG reference gene:2512956067; PFAM: 5'-3' exonuclease, C-terminal SAM fold; 3'-5' exonuclease; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A; TIGRFAM: DNA polymerase I YP_354114.2 IMG reference gene:2512956068; PFAM: HIT domain; truncated by 4 aa YP_354115.1 IMG reference gene:2512956070; PFAM: pfkB family carbohydrate kinase YP_354116.1 IMG reference gene:2512956071; PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; TIGRFAM: endonuclease III YP_354117.1 IMG reference gene:2512956072; PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase YP_354118.1 IMG reference gene:2512956073; PFAM: OmpA family YP_354119.1 IMG reference gene:2512956074; PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_354120.2 IMG reference gene:2512956075; PFAM: ATP synthase B/B' CF(0) YP_354121.1 IMG reference gene:2512956076; PFAM: ATP synthase B/B' CF(0) YP_354122.1 IMG reference gene:2512956077; PFAM: ATP synthase subunit C YP_354123.2 IMG reference gene:2512956078; PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); extended by 14 aa YP_354124.1 IMG reference gene:2512956079; PFAM: Putative F0F1-ATPase subunit (ATPase_gene1) YP_354125.1 IMG reference gene:2512956080 YP_354126.1 IMG reference gene:2512956081; PFAM: AMP-binding enzyme YP_354127.1 IMG reference gene:2512956082; PFAM: ATPase MipZ YP_354128.1 IMG reference gene:2512956083; PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31 YP_354129.1 IMG reference gene:2512956084; PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type YP_354130.1 IMG reference gene:2512956085; PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase YP_354131.1 IMG reference gene:2512956086 YP_354132.1 IMG reference gene:2512956087; PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM YP_354133.1 IMG reference gene:2512956088; PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16 YP_354134.1 IMG reference gene:2512956089; PFAM: Chorismate mutase type II; TIGRFAM: monofunctional chorismate mutase, alpha proteobacterial type YP_354135.1 IMG reference gene:2512956090; PFAM: Acetyltransferase (GNAT) family YP_354136.1 IMG reference gene:2512956091; PFAM: Acetyltransferase (GNAT) family YP_354137.1 IMG reference gene:2512956092 YP_354138.1 IMG reference gene:2512956093; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein YP_354139.1 IMG reference gene:2512956094 YP_354140.2 IMG reference gene:2512956095; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; truncated by 17 aa YP_354141.1 IMG reference gene:2512956097; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_354142.1 IMG reference gene:2512956098; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YP_354143.1 IMG reference gene:2512956099; PFAM: SNARE associated Golgi protein YP_354144.1 IMG reference gene:2512956100; PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type YP_354145.1 IMG reference gene:2512956101; PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial YP_354146.1 IMG reference gene:2512956102; PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD YP_354147.1 IMG reference gene:2512956103; PFAM: PP-loop family YP_354148.1 IMG reference gene:2512956104; PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_354149.1 IMG reference gene:2512956105; PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain YP_354150.1 IMG reference gene:2512956106; PFAM: MOSC N-terminal beta barrel domain; MOSC domain YP_354151.1 IMG reference gene:2512956107; PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB; small GTP-binding protein domain YP_354152.2 IMG reference gene:2512956108; PFAM: short chain dehydrogenase; truncated by 15 aa YP_354153.1 IMG reference gene:2512956109; PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase YP_354154.1 IMG reference gene:2512956110 YP_354155.1 IMG reference gene:2512956111; PFAM: Phosphoglycerate mutase family YP_354156.1 IMG reference gene:2512956112; PFAM: MoaE protein YP_354157.1 IMG reference gene:2512956113; PFAM: ThiS family; TIGRFAM: molybdopterin converting factor, subunit 1, non-archaeal YP_354158.1 IMG reference gene:2512956114; PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_354159.1 IMG reference gene:2512956115; PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit YP_354160.2 IMG reference gene:2512956116; PFAM: short chain dehydrogenase; truncated by 9 aa YP_008686547.1 IMG reference gene:2512956117; new gene YP_354161.1 IMG reference gene:2512956118; PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type YP_354162.1 IMG reference gene:2512956119; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_354163.1 IMG reference gene:2512956120; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit YP_354164.1 IMG reference gene:2512956121; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain YP_354165.1 IMG reference gene:2512956122; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type YP_354166.1 IMG reference gene:2512956123; PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD YP_354167.1 IMG reference gene:2512956124; PFAM: NADH-dependant formate dehydrogenase delta subunit FdsD YP_354168.1 IMG reference gene:2512956125 YP_354169.1 IMG reference gene:2512956126; PFAM: Glycosyl transferases group 1 YP_354170.1 IMG reference gene:2512956127; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_354171.2 IMG reference gene:2512956128 YP_008686548.1 IMG reference gene:2512956129; new gene YP_354172.1 IMG reference gene:2512956130; PFAM: WGR domain YP_354173.1 IMG reference gene:2512956131; PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain YP_354174.1 IMG reference gene:2512956132; PFAM: short chain dehydrogenase YP_354175.1 IMG reference gene:2512956133 YP_354176.1 IMG reference gene:2512956134 YP_354177.1 IMG reference gene:2512956135; PFAM: Protein of unknown function (DUF1365) YP_354178.1 IMG reference gene:2512956136; PFAM: Flavin containing amine oxidoreductase YP_354179.1 IMG reference gene:2512956137; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_354180.1 IMG reference gene:2512956138; TIGRFAM: anti-sigma factor, putative, ChrR family YP_354181.1 IMG reference gene:2512956139; PFAM: RmuC family YP_354182.2 IMG reference gene:2512956140; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL; truncated by 16 aa YP_354183.1 IMG reference gene:2512956141; PFAM: Peptidase M16 inactive domain YP_354184.2 IMG reference gene:2512956142; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16) YP_354185.1 IMG reference gene:2512956143; PFAM: Protein of unknown function (DUF3035) YP_354186.1 IMG reference gene:2512956144; PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase YP_354187.1 IMG reference gene:2512956145; PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_354188.1 IMG reference gene:2512956146; PFAM: Heparinase II/III-like protein YP_354189.2 IMG reference gene:2512956147; PFAM: NOL1/NOP2/sun family; NusB family; truncated by 11 aa YP_354190.1 IMG reference gene:2512956148; PFAM: Protein of unknown function (DUF1674) YP_354191.1 IMG reference gene:2512956149; PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase YP_354192.1 IMG reference gene:2512956150; PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A YP_354193.1 IMG reference gene:2512956151; PFAM: Predicted periplasmic protein (DUF2233) YP_354194.1 IMG reference gene:2512956152; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase YP_354195.1 IMG reference gene:2512956153; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases YP_354196.1 IMG reference gene:2512956154; PFAM: Protein of unknown function (DUF1643) YP_354197.1 IMG reference gene:2512956155; PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle YP_354198.1 IMG reference gene:2512956156; PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; Polyribonucleotide nucleotidyltransferase, RNA binding domain; 3' exoribonuclease family, domain 2; TIGRFAM: polyribonucleotide nucleotidyltransferase YP_354199.1 IMG reference gene:2512956157; PFAM: Hemolysin-type calcium-binding repeat (2 copies) YP_354200.1 IMG reference gene:2512956158; PFAM: Hemolysin-type calcium-binding repeat (2 copies) YP_354201.2 IMG reference gene:2512956159; extended by 86 aa YP_354202.1 IMG reference gene:2512956160; PFAM: Glycosyl transferases group 1 YP_354203.1 IMG reference gene:2512956161 YP_354204.1 IMG reference gene:2512956162; PFAM: Glycosyl transferases group 1 YP_354205.1 IMG reference gene:2512956163; PFAM: ABC transporter; TIGRFAM: type I secretion system ABC transporter, PrtD family YP_354206.1 IMG reference gene:2512956164; PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family YP_354207.1 IMG reference gene:2512956165; PFAM: Bacterial transferase hexapeptide (three repeats) YP_354208.1 IMG reference gene:2512956166 YP_354209.2 IMG reference gene:2512956167; PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; TIGRFAM: DNA-directed DNA polymerase III (polc); truncated by 12 aa YP_354210.1 IMG reference gene:2512956168; PFAM: Putative peptidoglycan binding domain; TIGRFAM: lytic murein transglycosylase YP_354211.1 IMG reference gene:2512956169; PFAM: RNB domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases YP_354212.1 IMG reference gene:2512956170; PFAM: Acetyltransferase (GNAT) family YP_354213.1 IMG reference gene:2512956171; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: succinyl-diaminopimelate desuccinylase, proteobacterial clade YP_354214.2 IMG reference gene:2512956172; extended by 16 aa YP_354215.1 IMG reference gene:2512956173; PFAM: Protein of unknown function (DUF421) YP_354216.1 IMG reference gene:2512956174; PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase YP_354217.2 IMG reference gene:2512956175; PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein; truncated by 6 aa YP_354218.1 IMG reference gene:2512956176; PFAM: Protein of unknown function (DUF2794) YP_354219.1 IMG reference gene:2512956177; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase YP_354220.1 IMG reference gene:2512956178; PFAM: Polyprenyl synthetase YP_354221.1 IMG reference gene:2512956179; PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit YP_354222.1 IMG reference gene:2512956180; PFAM: Histone deacetylase domain YP_354223.1 IMG reference gene:2512956181; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_354224.1 IMG reference gene:2512956182 YP_354225.1 IMG reference gene:2512956183; PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group I YP_354226.1 IMG reference gene:2512956184 YP_354227.1 IMG reference gene:2512956185; PFAM: Protein of unknown function (DUF1294) YP_354228.1 IMG reference gene:2512956186; PFAM: Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, putative YP_354229.2 IMG reference gene:2512956187; PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; truncated by 20 aa YP_354230.1 IMG reference gene:2512956188; PFAM: Transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase YP_354231.1 IMG reference gene:2512956189; PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II YP_354232.1 IMG reference gene:2512956190; PFAM: Glutathione-dependent formaldehyde-activating enzyme YP_354233.1 IMG reference gene:2512956191 YP_354234.1 IMG reference gene:2512956192; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase small subunit family protein, proteobacterial; glutamate synthases, NADH/NADPH, small subunit YP_354235.1 IMG reference gene:2512956193; PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP YP_354236.1 IMG reference gene:2512956194; PFAM: NAD dependent epimerase/dehydratase family YP_354237.1 IMG reference gene:2512956196; PFAM: 3'-5' exonuclease YP_354238.2 IMG reference gene:2512956197; PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein; extended by 14 aa YP_354239.1 IMG reference gene:2512956198; PFAM: Protein of unknown function (DUF1239) YP_354240.1 IMG reference gene:2512956199; PFAM: OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA YP_354241.1 IMG reference gene:2512956200; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter YP_354242.1 IMG reference gene:2512956201; PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein YP_354243.1 IMG reference gene:2512956202; PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN YP_354244.1 IMG reference gene:2512956203; PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase YP_354245.1 IMG reference gene:2512956204; PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_354246.1 IMG reference gene:2512956205; PFAM: Inositol monophosphatase family; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase, bacterial YP_354247.1 IMG reference gene:2512956206; PFAM: Uncharacterised BCR, YhbC family COG0779 YP_354248.1 IMG reference gene:2512956207; PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA; transcription termination factor NusA, C-terminal duplication YP_354249.2 IMG reference gene:2512956208; PFAM: Protein of unknown function (DUF448) YP_354250.1 IMG reference gene:2512956209; PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; Bacterial translation initiation factor IF-2 associated region; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2 YP_008686549.1 IMG reference gene:2512956210; new gene YP_354251.1 IMG reference gene:2512956211; PFAM: NUDIX domain; TIGRFAM: mutator mutT protein YP_354252.1 IMG reference gene:2512956212; PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase YP_354253.2 IMG reference gene:2512956213; PFAM: PPIC-type PPIASE domain YP_354254.1 IMG reference gene:2512956214; PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit YP_354255.2 IMG reference gene:2512956215; PFAM: OmpA family; truncated by 7 aa YP_354256.1 IMG reference gene:2512956216; PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc YP_354257.1 IMG reference gene:2512956217; PFAM: DnaJ C terminal region; DnaJ central domain (4 repeats); DnaJ domain; TIGRFAM: chaperone protein DnaJ YP_354258.1 IMG reference gene:2512956218; PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK YP_354259.1 IMG reference gene:2512956219; TIGRFAM: proline iminopeptidase, Neisseria-type subfamily YP_354260.1 IMG reference gene:2512956220; PFAM: Methyltransferase domain; TIGRFAM: ubiquinone biosynthesis O-methyltransferase YP_354261.1 IMG reference gene:2512956221; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase YP_354262.1 IMG reference gene:2512956222; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: D-xylulose kinase YP_354263.1 IMG reference gene:2512956223; PFAM: ABC transporter YP_354264.1 IMG reference gene:2512956224; PFAM: Branched-chain amino acid transport system / permease component YP_354265.1 IMG reference gene:2512956225; PFAM: family; TIGRFAM: D-xylose ABC transporter, substrate-binding protein YP_354266.1 IMG reference gene:2512956226; PFAM: ROK family YP_354267.1 IMG reference gene:2512956227; PFAM: Surface antigen variable number repeat; Surface antigen YP_354268.1 IMG reference gene:2512956228; PFAM: Family of unknown function (DUF490) YP_354269.1 IMG reference gene:2512956229; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN) YP_354270.1 IMG reference gene:2512956230 YP_354271.2 IMG reference gene:2512956231; PFAM: Protein of unknown function (DUF2886); extended by 7 aa YP_354272.1 IMG reference gene:2512956232; PFAM: Bacterial putative lipoprotein (DUF940) YP_354273.1 IMG reference gene:2512956233; PFAM: Polysaccharide biosynthesis protein YP_354274.1 IMG reference gene:2512956234; PFAM: Bacterial sugar transferase YP_354275.1 IMG reference gene:2512956235; PFAM: NAD dependent epimerase/dehydratase family YP_354276.1 IMG reference gene:2512956236 YP_354277.1 IMG reference gene:2512956238; PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin, GrxC family YP_354278.1 IMG reference gene:2512956239; PFAM: Phosphoribosyl transferase domain YP_354279.1 IMG reference gene:2512956240; PFAM: Methyltransferase domain YP_354280.2 IMG reference gene:2512956241; PFAM: Ferrochelatase; TIGRFAM: ferrochelatase YP_008686550.1 IMG reference gene:2512956242; new gene; replaced RSP_1198 on the opposite strand YP_354282.1 IMG reference gene:2512956243; PFAM: L,D-transpeptidase catalytic domain YP_354283.2 IMG reference gene:2512956244; PFAM: Cysteine-rich secretory protein family; truncated by 5 aa YP_354284.2 IMG reference gene:2512956245; PFAM: L,D-transpeptidase catalytic domain YP_354285.1 IMG reference gene:2512956246; PFAM: tRNA (Uracil-5-)-methyltransferase YP_354286.1 IMG reference gene:2512956247; PFAM: ABC transporter transmembrane region; ABC transporter YP_354287.1 IMG reference gene:2512956248; PFAM: ABC transporter transmembrane region; ABC transporter YP_354288.1 IMG reference gene:2512956249; PFAM: Poly A polymerase head domain YP_354289.1 IMG reference gene:2512956250; PFAM: NUDIX domain YP_354290.1 IMG reference gene:2512956251; PFAM: Hsp33 protein YP_354291.1 IMG reference gene:2512956252; PFAM: NUDIX domain YP_354292.2 IMG reference gene:2512956253; PFAM: Response regulator receiver domain; Stage II sporulation protein E (SpoIIE); extended by 18 aa YP_354293.1 IMG reference gene:2512956254; PFAM: Hpt domain YP_354294.1 IMG reference gene:2512956256; PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase YP_354295.2 IMG reference gene:2512956257; PFAM: Protein of unknown function (DUF533) YP_354296.1 IMG reference gene:2512956258 YP_354297.1 IMG reference gene:2512956259; PFAM: Aminotransferase class IV YP_354298.1 IMG reference gene:2512956260; PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase YP_354299.2 IMG reference gene:2512956261; PFAM: Phosphate acetyl/butaryl transferase; Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain; truncated by 8 aa YP_354300.1 IMG reference gene:2512956262; PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS YP_354301.2 IMG reference gene:2512956263; PFAM: GrpE; truncated by 12 aa YP_354302.1 IMG reference gene:2512956264; PFAM: HrcA protein C terminal domain; TIGRFAM: heat shock gene repressor HrcA YP_354303.1 IMG reference gene:2512956265; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH YP_354304.1 IMG reference gene:2512956266; PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family YP_354305.1 IMG reference gene:2512956267; PFAM: Endoribonuclease L-PSP YP_354306.1 IMG reference gene:2512956268; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase YP_354307.1 IMG reference gene:2512956269; PFAM: Protein of unknown function (DUF454) YP_354308.2 IMG reference gene:2512956270; PFAM: ParB-like nuclease domain; KorB domain; TIGRFAM: ParB-like partition proteins; truncated by 5 aa YP_354309.1 IMG reference gene:2512956271; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_354310.1 IMG reference gene:2512956272; PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB YP_354311.1 IMG reference gene:2512956273; PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A YP_354312.1 IMG reference gene:2512956274; PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein domain YP_354313.1 IMG reference gene:2512956275; PFAM: Rho termination factor, N-terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; Rho termination factor, RNA-binding domain; TIGRFAM: transcription termination factor Rho YP_354314.2 IMG reference gene:2512956276; PFAM: Uncharacterised protein family (UPF0093); TIGRFAM: TIGR00701 family protein; truncated by 11 aa YP_354315.1 IMG reference gene:2512956277; PFAM: Maf-like protein; TIGRFAM: MAF protein YP_354316.1 IMG reference gene:2512956278; PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase YP_354317.1 IMG reference gene:2512956279; PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase YP_354318.1 IMG reference gene:2512956280; PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III, epsilon subunit, Proteobacterial YP_354319.2 IMG reference gene:2512956281; PFAM: Preprotein translocase subunit SecB; TIGRFAM: protein-export chaperone SecB; truncated by 9 aa YP_354320.1 IMG reference gene:2512956282; PFAM: FxsA cytoplasmic membrane protein YP_354321.1 IMG reference gene:2512956283; PFAM: Tim44-like domain YP_354322.1 IMG reference gene:2512956284; PFAM: MltA specific insert domain; 3D domain YP_354323.1 IMG reference gene:2512956285; PFAM: Smr domain YP_354324.1 IMG reference gene:2512956286 YP_354325.1 IMG reference gene:2512956287; PFAM: Bacterial regulatory proteins, lacI family; family YP_354326.1 IMG reference gene:2512956288; PFAM: AP endonuclease family 2 C terminus; Xylose isomerase-like TIM barrel YP_354327.1 IMG reference gene:2512956289; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold YP_354328.1 IMG reference gene:2512956290; PFAM: ABC transporter YP_354329.1 IMG reference gene:2512956291; PFAM: Branched-chain amino acid transport system / permease component YP_354330.1 IMG reference gene:2512956292; PFAM: family; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_354331.1 IMG reference gene:2512956294 YP_008686551.1 IMG reference gene:2512956295; PFAM: H-NS histone family; new gene YP_354332.1 IMG reference gene:2512956296; PFAM: 2-nitropropane dioxygenase YP_354333.1 IMG reference gene:2512956297 YP_354334.1 IMG reference gene:2512956298; PFAM: Acetokinase family; TIGRFAM: acetate kinase YP_354335.1 IMG reference gene:2512956299; PFAM: MaoC like domain; Phosphate acetyl/butaryl transferase YP_354336.1 IMG reference gene:2512956300; PFAM: short chain dehydrogenase YP_354337.1 IMG reference gene:2512956301; PFAM: Poly-beta-hydroxybutyrate polymerase N terminal; Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus; alpha/beta hydrolase fold; TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I YP_354338.1 IMG reference gene:2512956302 YP_354339.1 IMG reference gene:2512956303 YP_354340.1 IMG reference gene:2512956304; PFAM: Domain of unknown function (DUF2383); TIGRFAM: conserved hypothetical protein YP_354341.1 IMG reference gene:2512956305; PFAM: Sensors of blue-light using FAD YP_354342.1 IMG reference gene:2512956306; PFAM: Response regulator receiver domain YP_354343.2 IMG reference gene:2512956307; truncated by 11 aa YP_354344.1 IMG reference gene:2512956308; PFAM: F subunit of K+-transporting ATPase (Potass_KdpF); TIGRFAM: K+-transporting ATPase, KdpF subunit YP_354345.1 IMG reference gene:2512956309; PFAM: Potassium-transporting ATPase A subunit; TIGRFAM: K+-transporting ATPase, KdpA YP_354346.1 IMG reference gene:2512956310; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_354347.1 IMG reference gene:2512956311; PFAM: K+-transporting ATPase, c chain; TIGRFAM: K+-transporting ATPase, C subunit YP_354348.1 IMG reference gene:2512956312; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Universal stress protein family; His Kinase A (phosphoacceptor) domain; Osmosensitive K+ channel His kinase sensor domain YP_354349.1 IMG reference gene:2512956313; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_354350.2 IMG reference gene:2512956314; PFAM: CsbD-like; truncated by 9 aa YP_354351.1 IMG reference gene:2512956315; PFAM: Histidine kinase; HAMP domain YP_354352.1 IMG reference gene:2512956316; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_354353.1 IMG reference gene:2512956317 YP_354354.1 IMG reference gene:2512956318; PFAM: Sigma-70, region 4; Response regulator receiver domain YP_354355.1 IMG reference gene:2512956319 YP_354356.1 IMG reference gene:2512956320; PFAM: Cyclic nucleotide-binding domain YP_354357.2 IMG reference gene:2512956321; extended by 14 aa YP_354358.2 IMG reference gene:2512956322; PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); truncated by 17 aa YP_354359.1 IMG reference gene:2512956323; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-phosphoglycolate phosphatase, prokaryotic YP_354360.1 IMG reference gene:2512956324; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_354361.2 IMG reference gene:2512956325; PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: probable Rubsico expression protein CbbX; truncated by 32 aa YP_354362.1 IMG reference gene:2512956326; PFAM: Ribulose bisphosphate carboxylase, small chain YP_354363.1 IMG reference gene:2512956327; PFAM: Ribulose bisphosphate carboxylase large chain, N-terminal domain; Ribulose bisphosphate carboxylase large chain, catalytic domain YP_354364.1 IMG reference gene:2512956328; PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, Calvin cycle subtype YP_354365.1 IMG reference gene:2512956329; PFAM: Phosphoribulokinase / Uridine kinase family YP_354366.1 IMG reference gene:2512956330; PFAM: Fructose-1-6-bisphosphatase YP_354367.1 IMG reference gene:2512956331; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_354368.1 IMG reference gene:2512956332; PFAM: ABC transporter YP_354369.1 IMG reference gene:2512956333; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter YP_354370.1 IMG reference gene:2512956334; PFAM: Branched-chain amino acid transport system / permease component YP_354371.1 IMG reference gene:2512956335; PFAM: Branched-chain amino acid transport system / permease component YP_354372.1 IMG reference gene:2512956336; PFAM: Receptor family ligand binding region YP_354373.1 IMG reference gene:2512956337; PFAM: Protein of unknown function (DUF2478) YP_354374.1 IMG reference gene:2512956338; PFAM: Aldehyde dehydrogenase family YP_354375.1 IMG reference gene:2512956339 YP_354376.1 IMG reference gene:2512956340; PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain YP_354377.1 IMG reference gene:2512956341; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_354378.1 IMG reference gene:2512956342; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_354379.1 IMG reference gene:2512956343; PFAM: Amidohydrolase family; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase YP_354380.1 IMG reference gene:2512956344 YP_354381.1 IMG reference gene:2512956345; PFAM: PAP2 superfamily YP_354382.1 IMG reference gene:2512956346; PFAM: Subtilase family YP_354383.1 IMG reference gene:2512956347 YP_354384.2 IMG reference gene:2512956348; PFAM: OmpA family; truncated by 7 aa YP_354385.1 IMG reference gene:2512956349; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins YP_354386.1 IMG reference gene:2512956350; PFAM: Domain of unknown function (DUF1078); TIGRFAM: flagellar hook-associated protein FlgK YP_354387.1 IMG reference gene:2512956351; PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region YP_354388.1 IMG reference gene:2512956352; PFAM: Flagellar P-ring protein YP_354389.1 IMG reference gene:2512956353; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box YP_354390.2 IMG reference gene:2512956354; PFAM: HTH DNA binding domain; truncated by 19 aa YP_354391.2 IMG reference gene:2512956355; PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP YP_354392.1 IMG reference gene:2512956356; PFAM: Surface presentation of antigens (SPOA); TIGRFAM: flagellar motor switch protein FliN YP_354393.1 IMG reference gene:2512956357 YP_354394.4 IMG reference gene:2512956358; PFAM: Secretory protein of YscJ/FliF family; Flagellar M-ring protein C-terminal; TIGRFAM: flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF); extended by 33 aa YP_354395.1 IMG reference gene:2512956359; PFAM: Flagellar basal body-associated protein FliL YP_354396.2 IMG reference gene:2512956360; extended by 8 aa YP_354397.1 IMG reference gene:2512956361 YP_354398.1 IMG reference gene:2512956362; PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: flagellar motor stator protein MotA YP_354399.1 IMG reference gene:2512956363 YP_354400.1 IMG reference gene:2512956364; PFAM: Transglycosylase SLT domain YP_354401.1 IMG reference gene:2512956365; PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA YP_354402.1 IMG reference gene:2512956366; PFAM: Bacterial export proteins, family 1; TIGRFAM: flagellar biosynthetic protein FliR YP_354403.1 IMG reference gene:2512956367; PFAM: FlhB HrpN YscU SpaS Family YP_354404.1 IMG reference gene:2512956368 YP_354405.2 IMG reference gene:2512956369; extended by 76 aa YP_354406.1 IMG reference gene:2512956370; PFAM: Flagellar L-ring protein YP_354407.1 IMG reference gene:2512956371; PFAM: SAF domain; TIGRFAM: flagella basal body P-ring formation protein FlgA YP_354408.1 IMG reference gene:2512956372; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins; flagellar basal-body rod protein FlgG, Gram-negative bacteria YP_354409.1 IMG reference gene:2512956373; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins YP_354410.1 IMG reference gene:2512956374; PFAM: Bacterial export proteins, family 3 YP_354411.1 IMG reference gene:2512956375; PFAM: Flagellar hook-basal body complex protein FliE YP_354412.2 IMG reference gene:2512956376; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; flagellar basal-body rod protein FlgB YP_354413.1 IMG reference gene:2512956377; PFAM: Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB YP_354414.1 IMG reference gene:2512956378; PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family YP_354415.1 IMG reference gene:2512956379 YP_354416.1 IMG reference gene:2512956380; PFAM: Rod binding protein YP_008686552.1 IMG reference gene:2512956381; new gene YP_354417.2 IMG reference gene:2512956382; PFAM: Flagellar hook-length control protein FliK; truncated by 637 aa YP_354418.1 IMG reference gene:2512956383; PFAM: Flagellar hook capping protein YP_354419.2 IMG reference gene:2512956384; PFAM: ABC1 family; TIGRFAM: 2-polyprenylphenol 6-hydroxylase; extended by 16 aa YP_354420.1 IMG reference gene:2512956385; PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases YP_354421.1 IMG reference gene:2512956386; PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg) YP_354422.1 IMG reference gene:2512956387; PFAM: Enoyl-CoA hydratase/isomerase family YP_354423.1 IMG reference gene:2512956388; PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20 YP_354424.1 IMG reference gene:2512956389; PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA YP_354425.1 IMG reference gene:2512956390; PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit YP_354426.2 IMG reference gene:2512956391; PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein YP_354427.1 IMG reference gene:2512956392 YP_354428.1 IMG reference gene:2512956393; PFAM: Toprim domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit YP_354429.1 IMG reference gene:2512956394; PFAM: Predicted membrane protein (DUF2254) YP_354430.1 IMG reference gene:2512956395; PFAM: AFG1-like ATPase YP_354431.1 IMG reference gene:2512956396; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; phosphoserine phosphatase SerB YP_354432.1 IMG reference gene:2512956398; PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase, Methanosarcina type; phosphoserine aminotransferase, putative YP_354433.1 IMG reference gene:2512956399; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: D-3-phosphoglycerate dehydrogenase YP_354434.1 IMG reference gene:2512956400; PFAM: Calcineurin-like phosphoesterase YP_354435.1 IMG reference gene:2512956401; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_354436.1 IMG reference gene:2512956402; PFAM: Penicillin-Binding Protein C-terminus Family; Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein 1C YP_354437.1 IMG reference gene:2512956403; PFAM: MG2 domain; Alpha-2-macroglobulin family; PAN domain; Alpha-2-macroglobulin family N-terminal region; Alpha-2-macroglobulin MG1 domain YP_354438.1 IMG reference gene:2512956404; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain YP_354439.1 IMG reference gene:2512956405; PFAM: Protein of unknown function (DUF328) YP_354440.1 IMG reference gene:2512956406; PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family YP_354441.2 IMG reference gene:2512956407; PFAM: YGGT family; truncated by 5 aa YP_354442.2 IMG reference gene:2512956408; PFAM: Thioesterase superfamily YP_354443.1 IMG reference gene:2512956409; PFAM: Vacuole effluxer Atg22 like YP_354444.1 IMG reference gene:2512956410; PFAM: Penicillin-insensitive murein endopeptidase YP_354445.2 IMG reference gene:2512956411; extended by 13 aa YP_354446.1 IMG reference gene:2512956412; PFAM: Uncharacterized ACR, YhhQ family COG1738; TIGRFAM: conserved hypothetical integral membrane protein YP_354447.1 IMG reference gene:2512956413; PFAM: RF-1 domain YP_354448.1 IMG reference gene:2512956414; PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM: nicotinate phosphoribosyltransferase YP_354449.1 IMG reference gene:2512956415; PFAM: Isochorismatase family YP_354450.1 IMG reference gene:2512956416; PFAM: short chain dehydrogenase YP_354451.1 IMG reference gene:2512956417; PFAM: 2-keto-3-deoxy-galactonokinase YP_354452.1 IMG reference gene:2512956418; PFAM: Alpha amylase, catalytic domain YP_354453.1 IMG reference gene:2512956419; PFAM: Major Facilitator Superfamily YP_354454.1 IMG reference gene:2512956420; PFAM: Major Facilitator Superfamily YP_354455.1 IMG reference gene:2512956421; PFAM: Glycosyl transferases group 1 YP_354456.1 IMG reference gene:2512956422; PFAM: Glycosyltransferase family 29 (sialyltransferase) YP_354457.1 IMG reference gene:2512956423; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) YP_354458.2 IMG reference gene:2512956424; PFAM: Carbonic anhydrase; truncated by 8 aa YP_354459.1 IMG reference gene:2512956425 YP_354460.2 IMG reference gene:2512956426; PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain; truncated by 18 aa YP_354461.2 IMG reference gene:2512956427; PFAM: NlpC/P60 family YP_354462.1 IMG reference gene:2512956428; PFAM: Protein of unknown function (DUF1006) YP_354463.1 IMG reference gene:2512956429; PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase YP_354464.1 IMG reference gene:2512956430; PFAM: Invasion associated locus B (IalB) protein YP_354465.1 IMG reference gene:2512956431; PFAM: L-asparaginase II YP_354466.1 IMG reference gene:2512956432; PFAM: NAD dependent epimerase/dehydratase family YP_354467.1 IMG reference gene:2512956433; PFAM: Bacterial AMP nucleoside phosphorylase N-terminus; Phosphorylase superfamily; TIGRFAM: AMP nucleosidase YP_354468.1 IMG reference gene:2512956434; PFAM: Bacterial DNA-binding protein YP_354469.1 IMG reference gene:2512956435; PFAM: EamA-like transporter family YP_354470.1 IMG reference gene:2512956436; PFAM: Chorismate synthase; TIGRFAM: chorismate synthase YP_354471.1 IMG reference gene:2512956437; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: ABC transporter periplasmic binding protein, thiB subfamily; thiamine ABC transporter, periplasmic binding protein YP_354472.1 IMG reference gene:2512956438; TIGRFAM: thiamine ABC transporter, permease protein YP_354473.1 IMG reference gene:2512956439; PFAM: ABC transporter; TIGRFAM: thiamine ABC transporter, ATP-binding protein YP_354474.1 IMG reference gene:2512956440; PFAM: Cytochrome C1 family YP_354475.1 IMG reference gene:2512956441; PFAM: Cytochrome b(N-terminal)/b6/petB; Cytochrome b(C-terminal)/b6/petD YP_354476.1 IMG reference gene:2512956442; PFAM: Rieske [2Fe-2S] domain; Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; Tat (twin-arginine translocation) pathway signal sequence YP_354477.1 IMG reference gene:2512956443 YP_354478.1 IMG reference gene:2512956444 YP_354479.1 IMG reference gene:2512956445; PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type YP_354480.1 IMG reference gene:2512956447; PFAM: N-formylglutamate amidohydrolase YP_354481.4 IMG reference gene:2512956448; PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; truncated by 32 aa YP_354482.1 IMG reference gene:2512956449; PFAM: SPFH domain / Band 7 family YP_354483.1 IMG reference gene:2512956450 YP_354484.1 IMG reference gene:2512956451 YP_354485.2 IMG reference gene:2512956452; PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 1; truncated by 23 aa YP_354486.1 IMG reference gene:2512956453; PFAM: ROK family YP_354487.1 IMG reference gene:2512956454 YP_354488.1 IMG reference gene:2512956455; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB YP_354489.1 IMG reference gene:2512956456; PFAM: Fasciclin domain YP_354490.1 IMG reference gene:2512956457; PFAM: Oxidoreductase molybdopterin binding domain YP_354491.1 IMG reference gene:2512956458; PFAM: Ferric reductase like transmembrane component YP_354492.1 IMG reference gene:2512956465 YP_354493.1 IMG reference gene:2512956466 YP_354494.1 IMG reference gene:2512956467 YP_354495.1 IMG reference gene:2512956468; PFAM: Plasmid stabilisation system protein YP_354496.1 IMG reference gene:2512956469; TIGRFAM: putative addiction module antidote protein, CC2985 family YP_354497.1 IMG reference gene:2512956470 YP_354498.1 IMG reference gene:2512956471; PFAM: Recombinase; Resolvase, N terminal domain YP_354499.1 IMG reference gene:2512956472; PFAM: ParB-like nuclease domain; RepB plasmid partitioning protein; TIGRFAM: ParB-like partition proteins YP_354500.1 IMG reference gene:2512956473; PFAM: ParB-like nuclease domain; RepB plasmid partitioning protein YP_354502.1 IMG reference gene:2512956477 YP_354503.1 IMG reference gene:2512956478; PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21 YP_354504.1 IMG reference gene:2512956479; PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27 YP_354505.2 IMG reference gene:2512956480; PFAM: Acetyltransferase (GNAT) family; truncated by 19 aa YP_354506.1 IMG reference gene:2512956481; PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA; small GTP-binding protein domain YP_354507.1 IMG reference gene:2512956482; PFAM: PUA domain; Amino acid kinase family; TIGRFAM: glutamate 5-kinase YP_354508.1 IMG reference gene:2512956483; PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase YP_354509.1 IMG reference gene:2512956484; PFAM: Uncharacterized protein conserved in bacteria (DUF2328) YP_354510.1 IMG reference gene:2512956485; PFAM: Protein of unknown function (DUF3553) YP_354511.1 IMG reference gene:2512956486 YP_354512.2 IMG reference gene:2512956487; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; extended by 28 aa YP_354513.1 IMG reference gene:2512956488; PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase YP_354514.1 IMG reference gene:2512956489; PFAM: SpoU rRNA Methylase family; TIGRFAM: RNA methyltransferase, TrmH family, group 1 YP_354515.1 IMG reference gene:2512956490; PFAM: EthD protein; TIGRFAM: conserved hypothetical protein YP_354516.1 IMG reference gene:2512956491; PFAM: Cytochrome oxidase assembly protein YP_354517.1 IMG reference gene:2512956492; PFAM: Carboxypeptidase Taq (M32) metallopeptidase YP_008686449.1 IMG reference gene:2512956493; new gene YP_008686450.1 IMG reference gene:2512956494; new gene YP_354518.1 IMG reference gene:2512956495; PFAM: Enoyl-CoA hydratase/isomerase family YP_354519.1 IMG reference gene:2512956496; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1 YP_354520.1 IMG reference gene:2512956497; PFAM: Protein of unknown function, DUF583 YP_354522.1 IMG reference gene:2512956499; PFAM: Amidohydrolase family YP_354527.1 IMG reference gene:2512956507; PFAM: von Willebrand factor type A domain YP_354528.1 IMG reference gene:2512956508 YP_354529.1 IMG reference gene:2512956510; PFAM: Transposase YP_354530.1 IMG reference gene:2512956512; PFAM: HpcH/HpaI aldolase/citrate lyase family YP_354531.1 IMG reference gene:2512956513; PFAM: Prokaryotic protein of unknown function (DUF849) YP_354532.1 IMG reference gene:2512956514 YP_354533.1 IMG reference gene:2512956515; PFAM: Flavin reductase like domain YP_354534.1 IMG reference gene:2512956516; PFAM: Acyl-CoA dehydrogenase, C-terminal domain YP_354535.1 IMG reference gene:2512956517 YP_354536.1 IMG reference gene:2512956518 YP_354537.1 IMG reference gene:2512956519; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_354538.2 IMG reference gene:2512956520; PFAM: Bacterial regulatory proteins, tetR family; extended by 14 aa YP_354539.1 IMG reference gene:2512956521 YP_354540.1 IMG reference gene:2512956522; PFAM: Flavodoxin-like fold YP_354541.1 IMG reference gene:2512956523; PFAM: IclR helix-turn-helix domain YP_354542.1 IMG reference gene:2512956525; PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family YP_354543.1 IMG reference gene:2512956526; PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG YP_354544.1 IMG reference gene:2512956527; PFAM: Aminotransferase class I and II; TIGRFAM: 5-aminolevulinic acid synthase YP_354545.1 IMG reference gene:2512956528; PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_354546.2 IMG reference gene:2512956529; PFAM: Binding-protein-dependent transport system inner membrane component; extended by 8 aa YP_354547.1 IMG reference gene:2512956530; PFAM: Binding-protein-dependent transport system inner membrane component YP_354548.1 IMG reference gene:2512956531; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_354549.1 IMG reference gene:2512956532; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_354550.1 IMG reference gene:2512956533; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_354551.1 IMG reference gene:2512956534; PFAM: Bacterial protein of unknown function (DUF894) YP_354552.1 IMG reference gene:2512956535; PFAM: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain; X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM: putative hydrolase, CocE/NonD family YP_354553.1 IMG reference gene:2512956536; PFAM: short chain dehydrogenase YP_354554.1 IMG reference gene:2512956537; PFAM: Binding-protein-dependent transport system inner membrane component YP_354555.1 IMG reference gene:2512956538; PFAM: Binding-protein-dependent transport system inner membrane component YP_354556.1 IMG reference gene:2512956539; PFAM: Bacterial extracellular solute-binding protein YP_354557.1 IMG reference gene:2512956540; PFAM: ABC transporter; TOBE domain; TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit YP_354558.1 IMG reference gene:2512956541; PFAM: Bacterial regulatory proteins, luxR family YP_354559.1 IMG reference gene:2512956542 YP_354560.1 IMG reference gene:2512956544; truncated by 64 aa YP_354561.1 IMG reference gene:2512956545; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain YP_354562.1 IMG reference gene:2512956546; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_354563.1 IMG reference gene:2512956547; PFAM: NapC/NirT cytochrome c family, N-terminal region; TIGRFAM: trimethylamine-N-oxide reductase c-type cytochrome TorC YP_354564.1 IMG reference gene:2512956548; PFAM: Nitrate reductase delta subunit YP_354565.1 IMG reference gene:2512956549; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductases; Tat (twin-arginine translocation) pathway signal sequence YP_354566.1 IMG reference gene:2512956550; PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain YP_354567.1 IMG reference gene:2512956551; PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial YP_354568.1 IMG reference gene:2512956552; PFAM: Bacterial protein of unknown function (DUF839) YP_354569.1 IMG reference gene:2512956553; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_354570.1 IMG reference gene:2512956554; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_354571.1 IMG reference gene:2512956555 YP_354572.1 IMG reference gene:2512956556; PFAM: Bacterial SH3 domain YP_354573.1 IMG reference gene:2512956557 YP_354574.1 IMG reference gene:2512956558; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_354575.2 IMG reference gene:2512956559; PFAM: ABC transporter; CBS domain; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit YP_354576.1 IMG reference gene:2512956560; PFAM: Binding-protein-dependent transport system inner membrane component YP_354577.1 IMG reference gene:2512956561; PFAM: Substrate binding domain of ABC-type glycine betaine transport system YP_354578.2 IMG reference gene:2512956562; PFAM: Bacterial transferase hexapeptide (three repeats); extended by 41 aa YP_354579.1 IMG reference gene:2512956563 YP_354580.1 IMG reference gene:2512956564; PFAM: short chain dehydrogenase YP_354581.1 IMG reference gene:2512956565; PFAM: AMP-binding enzyme YP_354582.1 IMG reference gene:2512956566; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain YP_354583.1 IMG reference gene:2512956567; PFAM: Major Facilitator Superfamily YP_354584.1 IMG reference gene:2512956568 YP_354585.1 IMG reference gene:2512956569 YP_354586.1 IMG reference gene:2512956570; PFAM: NADPH-dependent FMN reductase YP_354587.1 IMG reference gene:2512956571; PFAM: MOFRL family YP_354588.1 IMG reference gene:2512956572; PFAM: NmrA-like family YP_354589.1 IMG reference gene:2512956573; PFAM: Membrane bound L-sorbosone dehydrogenase YP_354590.1 IMG reference gene:2512956574; PFAM: L,D-transpeptidase catalytic domain YP_354591.1 IMG reference gene:2512956575; PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase YP_354592.1 IMG reference gene:2512956576; PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: TIGR03440 family protein YP_354593.1 IMG reference gene:2512956577; PFAM: Uncharacterized conserved protein (DUF2260); TIGRFAM: probable methyltransferase YP_354594.1 IMG reference gene:2512956578; PFAM: FAD binding domain of DNA photolyase; Deoxyribodipyrimidine photo-lyase-related protein YP_354595.1 IMG reference gene:2512956579; PFAM: Uncharacterized protein conserved in bacteria (DUF2218) YP_354596.1 IMG reference gene:2512956580; PFAM: Periplasmic binding protein YP_354597.1 IMG reference gene:2512956581; PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport YP_354598.1 IMG reference gene:2512956583; PFAM: ABC transporter transmembrane region; ABC transporter YP_354599.1 IMG reference gene:2512956584; PFAM: Protein of unknown function (DUF2934) YP_354600.1 IMG reference gene:2512956585; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_354601.1 IMG reference gene:2512956586 YP_354602.1 IMG reference gene:2512956587; PFAM: Sulfatase; Domain of unknown function (DUF1705) YP_354603.1 IMG reference gene:2512956588; PFAM: Prokaryotic diacylglycerol kinase YP_354604.1 IMG reference gene:2512956589; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_354605.1 IMG reference gene:2512956590; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_354606.1 IMG reference gene:2512956591; PFAM: Glutathione-dependent formaldehyde-activating enzyme YP_354607.2 IMG reference gene:2512956592; PFAM: PhnA protein; PhnA Zinc-Ribbon; TIGRFAM: alkylphosphonate utilization operon protein PhnA; extended by 3 aa YP_354608.1 IMG reference gene:2512956593 YP_354609.1 IMG reference gene:2512956594; PFAM: Uncharacterized protein conserved in bacteria (DUF2076) YP_354610.1 IMG reference gene:2512956595; PFAM: Uncharacterised protein family UPF0005 YP_354611.2 IMG reference gene:2512956596; extended by 3 aa YP_354612.1 IMG reference gene:2512956597; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_354613.1 IMG reference gene:2512956598 YP_354614.1 IMG reference gene:2512956599; PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, subunit I YP_354615.2 IMG reference gene:2512956600; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; non-canonical start codon; truncated by 90 aa YP_008686451.1 IMG reference gene:2512956601; PFAM: Predicted membrane protein (DUF2231); new gene YP_354616.1 IMG reference gene:2512956602; PFAM: Uncharacterised protein family (UPF0093) YP_354617.1 IMG reference gene:2512956603; PFAM: EAL domain; GGDEF domain; CHASE4 domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_008686452.1 IMG reference gene:2512956604; new gene YP_354618.1 IMG reference gene:2512956605; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family YP_008686453.1 IMG reference gene:2512956606; new gene YP_354619.1 IMG reference gene:2512956607; PFAM: Polyketide cyclase / dehydrase and lipid transport; TIGRFAM: PEP-CTERM protein sorting domain YP_354620.1 IMG reference gene:2512956608; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_354621.1 IMG reference gene:2512956609; PFAM: HWE histidine kinase; PAS fold; TIGRFAM: PAS domain S-box YP_354623.1 IMG reference gene:2512956611; PFAM: Uncharacterised BCR, COG1937 YP_008686454.1 IMG reference gene:2512956612; new gene YP_354624.1 IMG reference gene:2512956613; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_354625.1 IMG reference gene:2512956614 YP_354626.1 IMG reference gene:2512956615; PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain YP_354627.1 IMG reference gene:2512956616; PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain YP_354628.1 IMG reference gene:2512956617; PFAM: 3-demethylubiquinone-9 3-methyltransferase YP_354629.1 IMG reference gene:2512956618; PFAM: FAD dependent oxidoreductase YP_354630.1 IMG reference gene:2512956619; PFAM: Uncharacterized protein conserved in bacteria (DUF2248) YP_354631.1 IMG reference gene:2512956620; PFAM: Transglycosylase associated protein YP_354632.1 IMG reference gene:2512956621; PFAM: Domain of unknown function DUF20 YP_354633.1 IMG reference gene:2512956623; PFAM: YodA YP_354634.1 IMG reference gene:2512956624 YP_354635.1 IMG reference gene:2512956625; PFAM: Alpha/Beta hydrolase family of unknown function (DUF1234) YP_354636.1 IMG reference gene:2512956626; PFAM: DoxX YP_354637.1 IMG reference gene:2512956627 YP_354638.1 IMG reference gene:2512956628 YP_354639.1 IMG reference gene:2512956629; PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase YP_354640.1 IMG reference gene:2512956630; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_354641.1 IMG reference gene:2512956631 YP_354642.1 IMG reference gene:2512956632; PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein YP_354643.1 IMG reference gene:2512956633; PFAM: ArsC family; TIGRFAM: arsenate reductase (glutaredoxin) YP_354644.2 IMG reference gene:2512956635; extended by 8 aa YP_354645.1 IMG reference gene:2512956637; PFAM: Protein kinase domain YP_354646.1 IMG reference gene:2512956638; PFAM: FHA domain YP_354647.1 IMG reference gene:2512956639; PFAM: ABC transporter YP_354648.1 IMG reference gene:2512956640 YP_354649.1 IMG reference gene:2512956641; PFAM: Formylglycine-generating sulfatase enzyme YP_354650.1 IMG reference gene:2512956642 YP_354651.2 IMG reference gene:2512956643; PFAM: Protein kinase domain; truncated by 3 aa YP_354652.1 IMG reference gene:2512956644 YP_354653.1 IMG reference gene:2512956645; PFAM: Protein of unknown function (DUF1593) YP_354654.1 IMG reference gene:2512956646 YP_354655.1 IMG reference gene:2512956647; PFAM: SMP-30/Gluconolaconase/LRE-like region YP_354657.1 IMG reference gene:2512956649 YP_354658.1 IMG reference gene:2512956650; PFAM: Protein of unknown function, DUF485 YP_354659.1 IMG reference gene:2512956651; PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family YP_354660.1 IMG reference gene:2512956652; PFAM: NIPSNAP YP_354661.1 IMG reference gene:2512956653; PFAM: Conserved hypothetical protein 698; TIGRFAM: conserved hypothetical integral membrane protein YP_354662.1 IMG reference gene:2512956654; PFAM: Fumarase C-terminus; TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region YP_354663.1 IMG reference gene:2512956655; PFAM: Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region YP_354664.1 IMG reference gene:2512956656; PFAM: Fumarate reductase flavoprotein C-term; FAD binding domain YP_354665.1 IMG reference gene:2512956657; PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit YP_354666.1 IMG reference gene:2512956658; PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit YP_354667.1 IMG reference gene:2512956659; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_354668.1 IMG reference gene:2512956660; PFAM: NMT1/THI5 like YP_354669.1 IMG reference gene:2512956661; PFAM: NMT1/THI5 like YP_354670.1 IMG reference gene:2512956662; PFAM: Binding-protein-dependent transport system inner membrane component YP_354671.2 IMG reference gene:2512956663; PFAM: ABC transporter; truncated by 18 aa YP_354672.1 IMG reference gene:2512956664; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YP_354673.1 IMG reference gene:2512956665; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_354674.1 IMG reference gene:2512956666; PFAM: Sulfite exporter TauE/SafE YP_354675.1 IMG reference gene:2512956667 YP_354676.2 IMG reference gene:2512956668; PFAM: ABC transporter YP_354677.1 IMG reference gene:2512956669; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_354678.1 IMG reference gene:2512956670; PFAM: Uncharacterized conserved protein (DUF2156) YP_354679.1 IMG reference gene:2512956672 YP_354680.1 IMG reference gene:2512956673; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase YP_354681.1 IMG reference gene:2512956674; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain YP_354682.1 IMG reference gene:2512956675; PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_354683.1 IMG reference gene:2512956676; PFAM: Binding-protein-dependent transport system inner membrane component YP_354684.1 IMG reference gene:2512956677; PFAM: ABC transporter YP_354685.1 IMG reference gene:2512956678; PFAM: NMT1/THI5 like YP_354686.1 IMG reference gene:2512956679; PFAM: Fumarylacetoacetate (FAA) hydrolase family YP_354687.1 IMG reference gene:2512956680; PFAM: Demethylmenaquinone methyltransferase YP_354688.1 IMG reference gene:2512956681; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase YP_354689.1 IMG reference gene:2512956682; PFAM: Sulfite exporter TauE/SafE YP_354690.1 IMG reference gene:2512956683; PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin; TIGRFAM: NCS1 nucleoside transporter family YP_354691.1 IMG reference gene:2512956684 YP_354692.1 IMG reference gene:2512956685; PFAM: short chain dehydrogenase YP_354693.1 IMG reference gene:2512956686; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain YP_354694.1 IMG reference gene:2512956687; PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA YP_354695.1 IMG reference gene:2512956688; PFAM: Ferric uptake regulator family YP_354696.1 IMG reference gene:2512956689; PFAM: Transglutaminase-like superfamily YP_354697.1 IMG reference gene:2512956690; PFAM: CoA-transferase family III YP_354698.1 IMG reference gene:2512956691; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_354699.1 IMG reference gene:2512956692; PFAM: short chain dehydrogenase YP_354700.1 IMG reference gene:2512956693; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_354701.1 IMG reference gene:2512956694; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyrinic acid a,c-diamide synthase YP_354702.1 IMG reference gene:2512956695 YP_354703.1 IMG reference gene:2512956696 YP_354704.1 IMG reference gene:2512956697; PFAM: Periplasmic glucan biosynthesis protein, MdoG YP_354705.2 IMG reference gene:2512956698; PFAM: ApbE family; split gene RSP_3188; artificial fusion in old version YP_008686455.1 IMG reference gene:2512956699; PFAM: Positive regulator of sigma(E), RseC/MucC; new gene; split gene RSP_3188; artificial fusion in old version YP_354706.1 IMG reference gene:2512956700; PFAM: 4Fe-4S binding domain YP_354707.1 IMG reference gene:2512956701; PFAM: 2Fe-2S iron-sulfur cluster binding domain YP_354708.2 IMG reference gene:2512956702; PFAM: Metallo-beta-lactamase superfamily; Flavodoxin; extended by 22 aa YP_354709.1 IMG reference gene:2512956703; PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit YP_354710.1 IMG reference gene:2512956704; PFAM: Putative Fe-S cluster; 4Fe-4S binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit YP_354711.1 IMG reference gene:2512956705; PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit YP_354712.1 IMG reference gene:2512956706; PFAM: NQR2, RnfD, RnfE family; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit YP_354713.1 IMG reference gene:2512956707; PFAM: FMN-binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit YP_354714.1 IMG reference gene:2512956708; PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit YP_354715.1 IMG reference gene:2512956709; PFAM: Uncharacterised protein family (UPF0125) YP_354716.1 IMG reference gene:2512956710; PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_354717.1 IMG reference gene:2512956711; PFAM: Hsp70 protein YP_354718.1 IMG reference gene:2512956713; PFAM: Aldo/keto reductase family YP_354719.1 IMG reference gene:2512956714; PFAM: AraC-type transcriptional regulator N-terminus YP_354720.1 IMG reference gene:2512956715; PFAM: DJ-1/PfpI family YP_354721.1 IMG reference gene:2512956716; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain YP_354722.1 IMG reference gene:2512956717; PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain YP_354723.1 IMG reference gene:2512956718; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YP_354724.1 IMG reference gene:2512956719; PFAM: Nickel uptake substrate-specific transmembrane region YP_354725.1 IMG reference gene:2512956720; PFAM: Cobalt uptake substrate-specific transmembrane region YP_354726.1 IMG reference gene:2512956721 YP_354727.1 IMG reference gene:2512956722; PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ YP_354728.1 IMG reference gene:2512956723; PFAM: ABC transporter YP_354729.1 IMG reference gene:2512956724; PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB) YP_354730.1 IMG reference gene:2512956725; PFAM: Bacterial Cytochrome Ubiquinol Oxidase YP_354731.1 IMG reference gene:2512956726 YP_354732.1 IMG reference gene:2512956727 YP_354733.1 IMG reference gene:2512956728 YP_354734.1 IMG reference gene:2512956729; PFAM: Nitroreductase family; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase YP_354735.1 IMG reference gene:2512956730 YP_354737.1 IMG reference gene:2512956732; PFAM: FecCD transport family YP_354738.1 IMG reference gene:2512956733; PFAM: FecCD transport family YP_354739.1 IMG reference gene:2512956734; PFAM: ABC transporter YP_008686456.1 IMG reference gene:2512956735; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; old pseudo; removed pseudo tag since there is no evidence of ORF disruption or truncation YP_354740.2 IMG reference gene:2512956736; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; truncated by 3 aa YP_354741.1 IMG reference gene:2512956737; PFAM: Sir2 family YP_354742.1 IMG reference gene:2512956738; PFAM: Radical SAM superfamily; TIGRFAM: KamA family protein; lysine-2,3-aminomutase-related protein YP_354743.1 IMG reference gene:2512956739; PFAM: Cupin domain YP_354744.2 IMG reference gene:2512956740; PFAM: Putative peptidoglycan binding domain; TIGRFAM: lytic murein transglycosylase; truncated by 49 aa YP_354745.1 IMG reference gene:2512956741; PFAM: Protein of unknown function (DUF2945) YP_354746.1 IMG reference gene:2512956742; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_354747.1 IMG reference gene:2512956743; PFAM: Binding-protein-dependent transport system inner membrane component YP_354748.1 IMG reference gene:2512956744; PFAM: Binding-protein-dependent transport system inner membrane component YP_354749.1 IMG reference gene:2512956745; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region YP_354750.1 IMG reference gene:2512956746; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region YP_354751.1 IMG reference gene:2512956747; TIGRFAM: lactoylglutathione lyase YP_354752.1 IMG reference gene:2512956748 YP_354753.1 IMG reference gene:2512956749; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_354754.1 IMG reference gene:2512956750; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_354755.1 IMG reference gene:2512956751; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family YP_008686457.1 IMG reference gene:2512956752; new gene YP_354756.1 IMG reference gene:2512956753; PFAM: Major Facilitator Superfamily YP_354757.1 IMG reference gene:2512956754; PFAM: D-aminopeptidase, domain B; D-aminopeptidase, domain C; Beta-lactamase YP_354758.1 IMG reference gene:2512956755; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_354759.1 IMG reference gene:2512956756; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_354760.1 IMG reference gene:2512956757; PFAM: Binding-protein-dependent transport system inner membrane component YP_354761.1 IMG reference gene:2512956758; PFAM: Binding-protein-dependent transport system inner membrane component YP_354762.1 IMG reference gene:2512956759; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_354763.1 IMG reference gene:2512956760; PFAM: Acetamidase/Formamidase family YP_354764.1 IMG reference gene:2512956761; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_354765.1 IMG reference gene:2512956762; PFAM: Binding-protein-dependent transport system inner membrane component YP_354766.1 IMG reference gene:2512956763; PFAM: Binding-protein-dependent transport system inner membrane component YP_354767.1 IMG reference gene:2512956764; PFAM: ANTAR domain YP_354768.1 IMG reference gene:2512956765 YP_354769.2 IMG reference gene:2512956766; PFAM: Aminotransferase class-III YP_354770.1 IMG reference gene:2512956767; PFAM: Thioesterase superfamily YP_354771.1 IMG reference gene:2512956768; PFAM: Copper binding proteins, plastocyanin/azurin family YP_354772.1 IMG reference gene:2512956769; PFAM: Cytochrome c YP_354773.1 IMG reference gene:2512956770 YP_354774.1 IMG reference gene:2512956771 YP_354775.1 IMG reference gene:2512956772; PFAM: Fructose-1-6-bisphosphatase YP_354776.1 IMG reference gene:2512956773; PFAM: Phosphoribulokinase / Uridine kinase family YP_354777.1 IMG reference gene:2512956774; PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast YP_354778.1 IMG reference gene:2512956775; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I YP_354779.1 IMG reference gene:2512956776; PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, Calvin cycle subtype YP_354780.1 IMG reference gene:2512956777; PFAM: Ribulose bisphosphate carboxylase large chain, N-terminal domain; Ribulose bisphosphate carboxylase large chain, catalytic domain YP_354781.1 IMG reference gene:2512956778; PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase YP_354782.1 IMG reference gene:2512956779; PFAM: ABC-2 type transporter YP_354783.1 IMG reference gene:2512956780; PFAM: ABC transporter YP_354784.1 IMG reference gene:2512956781; PFAM: ATPase family associated with various cellular activities (AAA) YP_354785.1 IMG reference gene:2512956782; PFAM: Protein of unknown function DUF58 YP_354786.1 IMG reference gene:2512956783 YP_354787.1 IMG reference gene:2512956784; PFAM: von Willebrand factor type A domain YP_354788.1 IMG reference gene:2512956785 YP_354789.1 IMG reference gene:2512956786 YP_354790.1 IMG reference gene:2512956787 YP_354791.2 IMG reference gene:2512956788; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain; truncated by 7 aa YP_354792.1 IMG reference gene:2512956789; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YP_354793.1 IMG reference gene:2512956790; PFAM: Xylose isomerase-like TIM barrel YP_354794.1 IMG reference gene:2512956791; PFAM: KduI/IolB family YP_354795.1 IMG reference gene:2512956792; PFAM: ABC transporter; TOBE domain YP_354796.1 IMG reference gene:2512956793; PFAM: Binding-protein-dependent transport system inner membrane component YP_354797.1 IMG reference gene:2512956794; PFAM: Binding-protein-dependent transport system inner membrane component YP_354798.1 IMG reference gene:2512956795; PFAM: Bacterial extracellular solute-binding protein YP_354799.1 IMG reference gene:2512956796; PFAM: PhoU domain; Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter; Phosphate:Na+ Symporter (PNaS) Family YP_354800.1 IMG reference gene:2512956797; PFAM: GMC oxidoreductase YP_354801.1 IMG reference gene:2512956798; PFAM: Branched-chain amino acid transport system / permease component YP_354802.1 IMG reference gene:2512956799; PFAM: Branched-chain amino acid transport system / permease component YP_354803.1 IMG reference gene:2512956800; PFAM: ABC transporter YP_354804.1 IMG reference gene:2512956801; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter YP_354805.1 IMG reference gene:2512956802; PFAM: Receptor family ligand binding region YP_354806.1 IMG reference gene:2512956803; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_354807.2 IMG reference gene:2512956804; extended by 16 aa YP_354808.1 IMG reference gene:2512956805; TIGRFAM: TRAP transporter solute receptor, TAXI family YP_354809.1 IMG reference gene:2512956806; PFAM: Protein of unknown function (DUF1194) YP_354810.1 IMG reference gene:2512956807; PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase YP_354811.1 IMG reference gene:2512956808; PFAM: Response regulator receiver domain YP_354812.1 IMG reference gene:2512956809; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_354813.2 IMG reference gene:2512956810; extended by 15 aa YP_354814.1 IMG reference gene:2512956811; PFAM: ABC1 family YP_354815.1 IMG reference gene:2512956812; PFAM: Protein of unknown function (DUF1311) YP_354816.1 IMG reference gene:2512956813; PFAM: WGR domain YP_008686458.1 IMG reference gene:2512956814; new gene YP_354817.1 IMG reference gene:2512956815; PFAM: EamA-like transporter family YP_354818.2 IMG reference gene:2512956816; extended by 24 aa YP_354819.1 IMG reference gene:2512956818; PFAM: Integrase core domain YP_354820.1 IMG reference gene:2512956820; PFAM: Phage integrase family YP_354821.1 IMG reference gene:2512956821 YP_008686459.1 IMG reference gene:2512956822; new gene YP_008686460.1 IMG reference gene:2512956824; new gene YP_354822.1 IMG reference gene:2512956826; PFAM: MT-A70 YP_354823.1 IMG reference gene:2512956827; PFAM: Bacterial regulatory proteins, tetR family YP_354824.1 IMG reference gene:2512956828; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family YP_354825.1 IMG reference gene:2512956829; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_354826.1 IMG reference gene:2512956830; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_354827.1 IMG reference gene:2512956831; PFAM: Flavin-binding monooxygenase-like YP_354828.2 IMG reference gene:2512956832; PFAM: Bacterial regulatory proteins, luxR family; truncated by 39 aa YP_354829.1 IMG reference gene:2512956833; PFAM: Polysaccharide biosynthesis protein YP_354830.1 IMG reference gene:2512956834; PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_354831.1 IMG reference gene:2512956835; PFAM: Rhomboid family YP_354832.1 IMG reference gene:2512956836 YP_354833.1 IMG reference gene:2512956837; PFAM: Protein of unknown function (DUF465) YP_354834.1 IMG reference gene:2512956838 YP_354835.1 IMG reference gene:2512956839; PFAM: Citrate transporter; TrkA-C domain YP_354836.1 IMG reference gene:2512956840; PFAM: Cupin domain YP_354837.1 IMG reference gene:2512956841; PFAM: LrgB-like family YP_354838.1 IMG reference gene:2512956842; PFAM: LrgA family YP_354839.2 IMG reference gene:2512956843; PFAM: Asp/Glu/Hydantoin racemase; extended by 13 aa YP_354840.1 IMG reference gene:2512956844; PFAM: Binding-protein-dependent transport system inner membrane component YP_354841.1 IMG reference gene:2512956845; PFAM: Binding-protein-dependent transport system inner membrane component YP_354842.1 IMG reference gene:2512956846; PFAM: TAT (twin-arginine translocation) pathway signal sequence YP_354843.1 IMG reference gene:2512956847; PFAM: ABC transporter; TOBE domain YP_354844.1 IMG reference gene:2512956848; PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_354845.1 IMG reference gene:2512956849; PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein YP_354846.1 IMG reference gene:2512956850; PFAM: EamA-like transporter family; TIGRFAM: rarD protein YP_354847.1 IMG reference gene:2512956851; PFAM: Ferritin-like domain; TIGRFAM: bacterioferritin YP_354848.1 IMG reference gene:2512956852; PFAM: Glycosyl transferases group 1 YP_354849.1 IMG reference gene:2512956853; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_354850.2 IMG reference gene:2512956854; PFAM: Domain of unknown function DUF20; truncated by 45 aa YP_354851.1 IMG reference gene:2512956855; PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase YP_354852.1 IMG reference gene:2512956856; PFAM: Homocysteine S-methyltransferase YP_354853.1 IMG reference gene:2512956857 YP_354854.2 IMG reference gene:2512956858; extended by 30 aa YP_354855.1 IMG reference gene:2512956859 YP_354858.1 IMG reference gene:2512956862; PFAM: Phage tail tube protein FII; TIGRFAM: phage contractile tail tube protein, P2 family YP_354859.1 IMG reference gene:2512956863; PFAM: Phage tail protein E YP_008686461.1 IMG reference gene:2512956864; PFAM: Phage P2 GpE; new gene YP_354860.1 IMG reference gene:2512956865; TIGRFAM: tape measure domain YP_354861.2 IMG reference gene:2512956866; PFAM: Phage P2 GpU; extended by 10 aa YP_354862.1 IMG reference gene:2512956867; PFAM: Phage Tail Protein X YP_354863.1 IMG reference gene:2512956868; PFAM: Phage late control gene D protein (GPD) YP_354864.2 IMG reference gene:2512956869; PFAM: D12 class N6 adenine-specific DNA methyltransferase; extended by 13 aa YP_354865.1 IMG reference gene:2512956870; PFAM: Type I restriction enzyme R protein N terminus (HSDR_N) YP_354866.1 IMG reference gene:2512956871; PFAM: Protein of unknown function (DUF2971) YP_354867.1 IMG reference gene:2512956872; PFAM: Family of unknown function (DUF1790) YP_354868.2 IMG reference gene:2512956873; PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase; extended by 18 aa YP_354869.1 IMG reference gene:2512956874; PFAM: Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; export-related chaperone CsaA YP_354870.1 IMG reference gene:2512956875; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_354871.1 IMG reference gene:2512956876; PFAM: Sulfotransferase family YP_354872.1 IMG reference gene:2512956878; PFAM: HAMP domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_354873.1 IMG reference gene:2512956879 YP_354874.1 IMG reference gene:2512956880; PFAM: Amidase YP_354875.1 IMG reference gene:2512956881; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_354876.1 IMG reference gene:2512956882; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_354877.1 IMG reference gene:2512956883; PFAM: Bacterial extracellular solute-binding protein, family 7 YP_354878.1 IMG reference gene:2512956884; PFAM: Predicted permease YP_354879.2 IMG reference gene:2512956885; PFAM: ABC transporter; extended by 22 aa YP_354880.1 IMG reference gene:2512956886; TIGRFAM: RND family efflux transporter, MFP subunit YP_354881.1 IMG reference gene:2512956887; PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II YP_354882.1 IMG reference gene:2512956888 YP_354883.1 IMG reference gene:2512956889 YP_354884.1 IMG reference gene:2512956890; PFAM: RES domain YP_354885.1 IMG reference gene:2512956891; PFAM: Protein of unknown function (DUF1236); Bacterial SH3 domain YP_354886.1 IMG reference gene:2512956892; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_354887.1 IMG reference gene:2512956893; PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain YP_354888.1 IMG reference gene:2512956894; PFAM: Putative cyclase YP_354889.1 IMG reference gene:2512956895; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain YP_354890.1 IMG reference gene:2512956896; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_354891.1 IMG reference gene:2512956897; PFAM: Tripartite tricarboxylate transporter family receptor YP_354892.1 IMG reference gene:2512956898; PFAM: Tripartite tricarboxylate transporter TctA family; Tripartite tricarboxylate transporter TctB family YP_354893.1 IMG reference gene:2512956899; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: tartrate dehydrogenase YP_354894.1 IMG reference gene:2512956900; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: tartrate dehydrogenase YP_354895.1 IMG reference gene:2512956901; PFAM: ABC transporter YP_354896.1 IMG reference gene:2512956902; PFAM: FecCD transport family YP_354897.1 IMG reference gene:2512956903; PFAM: Periplasmic binding protein YP_354898.1 IMG reference gene:2512956904; PFAM: Binding-protein-dependent transport system inner membrane component YP_354899.1 IMG reference gene:2512956905; PFAM: Binding-protein-dependent transport system inner membrane component YP_354900.1 IMG reference gene:2512956906; PFAM: ABC transporter; TOBE domain YP_354901.1 IMG reference gene:2512956907; PFAM: Bacterial extracellular solute-binding protein YP_354902.1 IMG reference gene:2512956908; PFAM: Demethylmenaquinone methyltransferase YP_354903.1 IMG reference gene:2512956909; PFAM: Carbon-nitrogen hydrolase YP_354904.1 IMG reference gene:2512956910; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_354905.2 IMG reference gene:2512956911; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; frameshift eliminated; joined gene; RSP_6180, RSP_3401 YP_354907.2 IMG reference gene:2512956912; PFAM: EAL domain; GAF domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; truncated by 3 aa YP_354908.2 IMG reference gene:2512956913; PFAM: DUF218 domain; truncated by 13 aa YP_354909.2 IMG reference gene:2512956914; PFAM: Protein of unknown function, DUF1537; truncated by 23 aa YP_354910.1 IMG reference gene:2512956915; PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_354911.1 IMG reference gene:2512956916; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase YP_354912.1 IMG reference gene:2512956917; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_354913.1 IMG reference gene:2512956918; PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase YP_354914.1 IMG reference gene:2512956919; PFAM: Tripartite tricarboxylate transporter TctA family YP_354915.1 IMG reference gene:2512956920; PFAM: Tripartite tricarboxylate transporter family receptor YP_354916.1 IMG reference gene:2512956921; PFAM: Tripartite tricarboxylate transporter TctB family YP_354917.2 IMG reference gene:2512956922; PFAM: Iron-containing alcohol dehydrogenase; truncated by 19 aa YP_354918.1 IMG reference gene:2512956923; PFAM: ABC transporter YP_354919.1 IMG reference gene:2512956924; PFAM: FecCD transport family YP_354920.1 IMG reference gene:2512956925; PFAM: FecCD transport family YP_354921.1 IMG reference gene:2512956926; PFAM: Periplasmic binding protein YP_354922.1 IMG reference gene:2512956927; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor YP_008686462.1 IMG reference gene:2512956929; new gene YP_354924.1 IMG reference gene:2512956930; PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase AhpD family core domain YP_354925.1 IMG reference gene:2512956931; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_354926.1 IMG reference gene:2512956932 YP_354927.1 IMG reference gene:2512956933 YP_354928.1 IMG reference gene:2512956934; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth) YP_354929.2 IMG reference gene:2512956935; PFAM: short chain dehydrogenase; truncated 47 aa YP_354930.1 IMG reference gene:2512956936; PFAM: Protein of unknown function (DUF1190) YP_354931.1 IMG reference gene:2512956937; PFAM: Glutathionylspermidine synthase YP_354932.1 IMG reference gene:2512956938; PFAM: Animal haem peroxidase YP_354933.1 IMG reference gene:2512956939 YP_354934.1 IMG reference gene:2512956940; PFAM: Caspase domain YP_354935.2 IMG reference gene:2512956941; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_354936.1 IMG reference gene:2512956942; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_354937.1 IMG reference gene:2512956943; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_354938.1 IMG reference gene:2512956944; PFAM: Ribbon-helix-helix protein, copG family; NikR C terminal nickel binding domain; TIGRFAM: nickel-responsive transcriptional regulator NikR YP_354939.1 IMG reference gene:2512956945 YP_354940.1 IMG reference gene:2512956946; PFAM: Protein of unknown function (DUF3140) YP_354941.1 IMG reference gene:2512956947; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_354942.1 IMG reference gene:2512956948; PFAM: Aminotransferase class I and II YP_354943.1 IMG reference gene:2512956949; PFAM: Endoribonuclease L-PSP YP_354944.1 IMG reference gene:2512956950; PFAM: Aminotransferase class I and II YP_354945.1 IMG reference gene:2512956951; PFAM: short chain dehydrogenase YP_354946.1 IMG reference gene:2512956952; PFAM: Demethylmenaquinone methyltransferase YP_354947.1 IMG reference gene:2512956953; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YP_354948.1 IMG reference gene:2512956954; PFAM: Acetamidase/Formamidase family YP_354949.1 IMG reference gene:2512956955; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain YP_354950.1 IMG reference gene:2512956956; PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_354951.1 IMG reference gene:2512956957; PFAM: Peptidase family M20/M25/M40; TIGRFAM: amidase, hydantoinase/carbamoylase family YP_354952.1 IMG reference gene:2512956958; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_354953.1 IMG reference gene:2512956959; PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_354954.1 IMG reference gene:2512956960; PFAM: Allophanate hydrolase subunit 2; TIGRFAM: biotin-dependent carboxylase uncharacterized domain YP_354955.2 IMG reference gene:2512956961; PFAM: Allophanate hydrolase subunit 1; TIGRFAM: TIGR00370 family protein YP_354956.1 IMG reference gene:2512956962; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_354957.2 IMG reference gene:2512956963; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_354958.1 IMG reference gene:2512956964; PFAM: Bacterial extracellular solute-binding protein, family 7 YP_354959.1 IMG reference gene:2512956965; PFAM: LamB/YcsF family YP_354960.1 IMG reference gene:2512956966; PFAM: Aminotransferase class IV; TIGRFAM: D-amino acid aminotransferase YP_354961.1 IMG reference gene:2512956967; PFAM: Dihydrodipicolinate synthetase family YP_354962.1 IMG reference gene:2512956968; PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_354963.1 IMG reference gene:2512956969; PFAM: ABC transporter YP_354964.1 IMG reference gene:2512956970; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_354965.1 IMG reference gene:2512956971; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_354966.1 IMG reference gene:2512956972; PFAM: Carbon-nitrogen hydrolase YP_354967.1 IMG reference gene:2512956973; PFAM: Amidohydrolase family; TIGRFAM: D-hydantoinase YP_354968.1 IMG reference gene:2512956974; PFAM: Asp/Glu/Hydantoin racemase YP_354969.1 IMG reference gene:2512956975; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_354970.1 IMG reference gene:2512956976; PFAM: Flavin reductase like domain YP_354971.1 IMG reference gene:2512956977; TIGRFAM: conserved hypothetical protein YP_354972.1 IMG reference gene:2512956978; PFAM: Uncharacterized protein conserved in bacteria (DUF2169) YP_354973.1 IMG reference gene:2512956979 YP_354974.1 IMG reference gene:2512956980 YP_354975.1 IMG reference gene:2512956981 YP_354976.1 IMG reference gene:2512956982 YP_354977.1 IMG reference gene:2512956983 YP_354978.1 IMG reference gene:2512956984; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: type VI secretion ATPase, ClpV1 family YP_354979.1 IMG reference gene:2512956985; PFAM: Protein kinase domain YP_354980.1 IMG reference gene:2512956986; PFAM: ImpA-related N-terminal; TIGRFAM: type VI secretion-associated protein, ImpA family YP_354981.1 IMG reference gene:2512956987; PFAM: Protein of unknown function (DUF770); TIGRFAM: type VI secretion protein, VC_A0107 family YP_354982.1 IMG reference gene:2512956988; PFAM: Protein of unknown function (DUF877); TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family YP_354983.1 IMG reference gene:2512956989; PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family YP_354984.1 IMG reference gene:2512956990; PFAM: Gene 25-like lysozyme; TIGRFAM: type VI secretion system lysozyme-related protein YP_354985.1 IMG reference gene:2512956991; PFAM: Bacterial protein of unknown function (DUF879); TIGRFAM: type VI secretion protein, VC_A0110 family YP_354986.1 IMG reference gene:2512956992; PFAM: Protein of unknown function (DUF1305); TIGRFAM: type VI secretion protein, VC_A0111 family YP_354987.2 IMG reference gene:2512956993; PFAM: FHA domain; TIGRFAM: type VI secretion system FHA domain protein YP_354988.1 IMG reference gene:2512956994; TIGRFAM: type VI secretion lipoprotein, VC_A0113 family YP_354989.1 IMG reference gene:2512956995; PFAM: Bacterial protein of unknown function (DUF876); TIGRFAM: type VI secretion protein, VC_A0114 family YP_354990.2 IMG reference gene:2512956996; PFAM: OmpA family; Uncharacterized protein conserved in bacteria (DUF2077); TIGRFAM: type IV / VI secretion system protein, DotU family; type VI secretion system OmpA/MotB family protein YP_354991.1 IMG reference gene:2512956997; PFAM: Protein of unknown function (DUF1215); Intracellular multiplication and human macrophage-killing; TIGRFAM: type VI secretion protein IcmF YP_354992.2 IMG reference gene:2512956998; PFAM: Uncharacterized protein conserved in bacteria (DUF2094); TIGRFAM: type VI secretion-associated protein, BMA_A0400 family; truncated by 6 aa YP_354993.1 IMG reference gene:2512956999; PFAM: Phage-related baseplate assembly protein; TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein YP_354994.1 IMG reference gene:2512957000; PFAM: Protein of unknown function (DUF1215); Intracellular multiplication and human macrophage-killing YP_354995.1 IMG reference gene:2512957001 YP_354996.1 IMG reference gene:2512957002; PFAM: Protein phosphatase 2C YP_354997.1 IMG reference gene:2512957003; PFAM: OmpA family YP_354998.1 IMG reference gene:2512957004 YP_354999.1 IMG reference gene:2512957005 YP_355000.2 IMG reference gene:2512957006; truncated by 146 aa YP_008686463.1 IMG reference gene:2512957007; new gene YP_355001.1 IMG reference gene:2512957008; PFAM: Caspase domain; Sel1 repeat YP_355002.1 IMG reference gene:2512957009 YP_355003.1 IMG reference gene:2512957010 YP_355004.1 IMG reference gene:2512957011; PFAM: Class II Aldolase and Adducin N-terminal domain YP_355005.1 IMG reference gene:2512957012 YP_355006.1 IMG reference gene:2512957013; PFAM: Branched-chain amino acid transport system / permease component YP_355007.1 IMG reference gene:2512957014; PFAM: Branched-chain amino acid transport system / permease component YP_355008.1 IMG reference gene:2512957015; PFAM: ABC transporter YP_355009.1 IMG reference gene:2512957016; PFAM: Sigma-70, region 4; Putative sugar-binding domain YP_355010.1 IMG reference gene:2512957017; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain YP_355011.1 IMG reference gene:2512957018; PFAM: Antibiotic biosynthesis monooxygenase YP_355012.1 IMG reference gene:2512957019; PFAM: Acetamidase/Formamidase family YP_355013.1 IMG reference gene:2512957020; PFAM: Hemolysin-type calcium-binding repeat (2 copies); TIGRFAM: type 1 secretion C-terminal target domain (VC_A0849 subclass) YP_355014.1 IMG reference gene:2512957021; PFAM: Peptidase propeptide and YPEB domain YP_355015.1 IMG reference gene:2512957022; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_355016.1 IMG reference gene:2512957023; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_008686464.1 IMG reference gene:2512957025; new gene YP_355017.2 IMG reference gene:2512957026; PFAM: GAF domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_355018.1 IMG reference gene:2512957027; PFAM: DJ-1/PfpI family YP_355019.1 IMG reference gene:2512957028; PFAM: Bacterial extracellular solute-binding protein YP_355020.1 IMG reference gene:2512957029; PFAM: ABC transporter; TOBE domain YP_355021.1 IMG reference gene:2512957030; PFAM: Binding-protein-dependent transport system inner membrane component YP_355022.1 IMG reference gene:2512957031; PFAM: Binding-protein-dependent transport system inner membrane component YP_355023.1 IMG reference gene:2512957032; PFAM: Proline racemase YP_355024.1 IMG reference gene:2512957033; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region YP_355025.1 IMG reference gene:2512957034; PFAM: Binding-protein-dependent transport system inner membrane component YP_355026.1 IMG reference gene:2512957035; PFAM: Binding-protein-dependent transport system inner membrane component YP_355027.1 IMG reference gene:2512957036; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_355028.1 IMG reference gene:2512957037; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_355029.2 IMG reference gene:2512957038; PFAM: Amidase; truncated by 13 aa YP_355030.1 IMG reference gene:2512957039; PFAM: Histone deacetylase domain YP_355031.1 IMG reference gene:2512957040; PFAM: Bacterial regulatory proteins, tetR family YP_355032.1 IMG reference gene:2512957041; PFAM: Amidohydrolase YP_355033.1 IMG reference gene:2512957042; PFAM: FAD dependent oxidoreductase YP_355034.1 IMG reference gene:2512957043; PFAM: AMP-binding enzyme YP_355035.1 IMG reference gene:2512957044; PFAM: Aldehyde dehydrogenase family YP_355036.1 IMG reference gene:2512957045; PFAM: Aminotransferase class-III YP_355037.1 IMG reference gene:2512957046; PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_355038.1 IMG reference gene:2512957047; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; 3-oxoadipyl-CoA thiolase YP_355039.1 IMG reference gene:2512957048; PFAM: Zinc-binding dehydrogenase YP_355040.1 IMG reference gene:2512957049; PFAM: Sulfotransferase domain YP_355041.2 IMG reference gene:2512957050; PFAM: Hemolysin-type calcium-binding repeat (2 copies); TIGRFAM: VCBS repeat; frameshift in old version eliminated; joined gene, RSP_3539, RSP_3540 YP_355043.2 IMG reference gene:2512957051; PFAM: Integrase core domain; truncated by 11 aa YP_355046.1 IMG reference gene:2512957054 YP_355047.1 IMG reference gene:2512957055 YP_355048.2 IMG reference gene:2512957056; extended by 107 aa YP_355049.1 IMG reference gene:2512957057; PFAM: Ribonucleotide reductase, all-alpha domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent YP_355050.1 IMG reference gene:2512957058; PFAM: Protein of unknown function (DUF1489) YP_355051.1 IMG reference gene:2512957059; PFAM: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase YP_355052.1 IMG reference gene:2512957060 YP_355053.1 IMG reference gene:2512957061; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase YP_355054.1 IMG reference gene:2512957062; PFAM: SlyX YP_355055.1 IMG reference gene:2512957063; PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; TIGRFAM: DNA-directed DNA polymerase III (polc) YP_355056.1 IMG reference gene:2512957064; PFAM: 2Fe-2S iron-sulfur cluster binding domain; FAD binding domain in molybdopterin dehydrogenase; [2Fe-2S] binding domain; CO dehydrogenase flavoprotein C-terminal domain; TIGRFAM: xanthine dehydrogenase, small subunit YP_355057.1 IMG reference gene:2512957065; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YP_355058.1 IMG reference gene:2512957066; PFAM: XdhC and CoxI family; TIGRFAM: xanthine dehydrogenase accessory protein XdhC YP_355059.1 IMG reference gene:2512957067; PFAM: ABC transporter YP_355060.1 IMG reference gene:2512957068; PFAM: Branched-chain amino acid transport system / permease component YP_355061.1 IMG reference gene:2512957069; PFAM: Branched-chain amino acid transport system / permease component YP_355062.1 IMG reference gene:2512957070; PFAM: Basic membrane protein YP_355063.1 IMG reference gene:2512957071 YP_355064.1 IMG reference gene:2512957072; PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_355065.1 IMG reference gene:2512957073; PFAM: FAD dependent oxidoreductase YP_355066.1 IMG reference gene:2512957074; PFAM: Protein of unknown function (DUF938) YP_355067.1 IMG reference gene:2512957075; PFAM: Glycosyl hydrolases family 25 YP_355068.1 IMG reference gene:2512957076; PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; FAD dependent oxidoreductase YP_355069.1 IMG reference gene:2512957077; PFAM: ABC 3 transport family YP_355070.1 IMG reference gene:2512957078; PFAM: ABC transporter YP_355071.1 IMG reference gene:2512957079; PFAM: Ferric uptake regulator family YP_355072.1 IMG reference gene:2512957080; PFAM: Periplasmic solute binding protein family YP_355073.1 IMG reference gene:2512957081; PFAM: Aldose 1-epimerase YP_355074.1 IMG reference gene:2512957082; PFAM: Gas vesicle protein YP_355075.1 IMG reference gene:2512957083; PFAM: Phenylalanine and histidine ammonia-lyase YP_355076.1 IMG reference gene:2512957084; PFAM: Gas vesicle protein K YP_355077.2 IMG reference gene:2512957085; truncated by 7 aa YP_008686465.1 IMG reference gene:2512957086; PFAM: Gas vesicle protein; new gene YP_355078.1 IMG reference gene:2512957087; PFAM: Gas vesicle synthesis protein GvpL/GvpF YP_355079.1 IMG reference gene:2512957088; PFAM: Gas vesicle synthesis protein GvpL/GvpF YP_355080.1 IMG reference gene:2512957089; PFAM: Gas vesicle protein G YP_355081.1 IMG reference gene:2512957090; PFAM: Gas vesicle synthesis protein GvpL/GvpF YP_355082.1 IMG reference gene:2512957091; PFAM: Hsp20/alpha crystallin family YP_355083.1 IMG reference gene:2512957092; PFAM: Gas vesicle protein YP_355084.2 IMG reference gene:2512957093; PFAM: Gas vesicle synthesis protein GvpO YP_355085.1 IMG reference gene:2512957094 YP_355086.1 IMG reference gene:2512957095; PFAM: AAA domain (dynein-related subfamily); TIGRFAM: gas vesicle protein GvpN YP_355087.1 IMG reference gene:2512957096; PFAM: Cytochrome c; Protein of unknown function (DUF989) YP_355088.1 IMG reference gene:2512957097; PFAM: Uncharacterized protein conserved in bacteria (DUF2237) YP_355089.1 IMG reference gene:2512957098; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit YP_355090.1 IMG reference gene:2512957099; PFAM: Acetyltransferase (GNAT) family YP_355091.1 IMG reference gene:2512957100; PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase YP_355092.2 IMG reference gene:2512957101; PFAM: Protein of unknown function (DUF1049); truncated by 6 aa YP_355093.1 IMG reference gene:2512957102; PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, beta subunit YP_355094.1 IMG reference gene:2512957103; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1 YP_355095.1 IMG reference gene:2512957104; PFAM: Cytidylate kinase; Adenylate kinase; TIGRFAM: cytidylate kinase YP_355096.1 IMG reference gene:2512957105; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase YP_355097.1 IMG reference gene:2512957106; PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase YP_355098.1 IMG reference gene:2512957107; PFAM: Putative peptidoglycan binding domain YP_355099.1 IMG reference gene:2512957108; PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase YP_355100.1 IMG reference gene:2512957109; PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase YP_355101.1 IMG reference gene:2512957110; PFAM: CBS domain; Transporter associated domain YP_355102.1 IMG reference gene:2512957111; PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family YP_355103.1 IMG reference gene:2512957112; PFAM: PhoH-like protein YP_355104.1 IMG reference gene:2512957113; PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family YP_355105.2 IMG reference gene:2512957114; PFAM: GDSL-like Lipase/Acylhydrolase YP_355106.1 IMG reference gene:2512957115; PFAM: ABC transporter YP_355107.1 IMG reference gene:2512957116; PFAM: Predicted permease YP_355108.2 IMG reference gene:2512957117; truncated by 19 aa YP_355109.1 IMG reference gene:2512957118; PFAM: Rhodanese-like domain; TIGRFAM: tRNA 2-selenouridine synthase YP_355110.1 IMG reference gene:2512957119; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: pyridine nucleotide-disulfide oxidoreductase family protein YP_355111.1 IMG reference gene:2512957120; PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain; TIGRFAM: RNA polymerase sigma-54 factor YP_355112.1 IMG reference gene:2512957121; PFAM: Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region YP_355113.1 IMG reference gene:2512957123; PFAM: Recombinase; Resolvase, N terminal domain YP_355114.1 IMG reference gene:2512957124; PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins YP_355115.1 IMG reference gene:2512957125; PFAM: Uncharacterized protein conserved in bacteria (DUF2312) YP_355116.1 IMG reference gene:2512957126 YP_355117.1 IMG reference gene:2512957127 YP_008686466.1 IMG reference gene:2512957129; new gene YP_355118.1 IMG reference gene:2512957130 YP_008686467.1 IMG reference gene:2512957131; new gene YP_355119.2 IMG reference gene:2512957132; PFAM: Domain of unknown function (DUF1937); truncated by 44 aa YP_355120.2 IMG reference gene:2512957133; truncated by 11 aa YP_355121.2 IMG reference gene:2512957134 YP_355122.1 IMG reference gene:2512957135 YP_008686468.1 IMG reference gene:2512957136; new gene YP_355123.1 IMG reference gene:2512957137; PFAM: Uncharacterized protein conserved in bacteria (DUF2329); Glycosyltransferase family 36; Putative carbohydrate binding domain; Glycosyltransferase 36 associated family YP_355124.1 IMG reference gene:2512957138 YP_008686469.1 IMG reference gene:2512957139; new gene YP_355125.1 IMG reference gene:2512957140; PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL YP_008686470.1 IMG reference gene:2512957142; new gene YP_355126.1 IMG reference gene:2512957143 YP_355127.1 IMG reference gene:2512957144; PFAM: Cyclic nucleotide-binding domain YP_355128.1 IMG reference gene:2512957145 YP_355130.1 IMG reference gene:2512957148 YP_008686471.1 IMG reference gene:2512957149; new gene; replaced RSP_3618 on the opposite strand YP_008686472.1 IMG reference gene:2512957150; new gene; replaced RSP_3619 on the opposite strand YP_008686473.1 IMG reference gene:2512957151; new gene; replaced RSP_3619 on the opposite strand YP_355133.1 IMG reference gene:2512957152; PFAM: 'Cold-shock' DNA-binding domain YP_355134.2 IMG reference gene:2512957153; PFAM: 'Cold-shock' DNA-binding domain; truncated by 9 aa YP_355135.1 IMG reference gene:2512957154; PFAM: Protein of unknown function (DUF982) YP_355136.2 IMG reference gene:2512957155; PFAM: Phage integrase family; truncated by 9 aa YP_008686474.1 IMG reference gene:2512957156; new gene YP_355137.1 IMG reference gene:2512957157 YP_355138.1 IMG reference gene:2512957158 YP_355139.1 IMG reference gene:2512957161; PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type YP_355140.1 IMG reference gene:2512957162 YP_355141.1 IMG reference gene:2512957163 YP_355142.1 IMG reference gene:2512957164 YP_355143.2 IMG reference gene:2512957165; extended by 5 aa YP_355144.1 IMG reference gene:2512957166 YP_355145.1 IMG reference gene:2512957167 YP_355146.1 IMG reference gene:2512957168 YP_355147.2 IMG reference gene:2512957169; PFAM: Protein of unknown function (DUF497); truncated by 6 aa YP_355148.1 IMG reference gene:2512957170; PFAM: D12 class N6 adenine-specific DNA methyltransferase YP_355149.1 IMG reference gene:2512957171 YP_355150.1 IMG reference gene:2512957172 YP_355151.2 IMG reference gene:2512957173; extended by 85 aa; replaced RSP_3639 on the opposite strand YP_355153.1 IMG reference gene:2512957174 YP_355154.1 IMG reference gene:2512957175; PFAM: Nucleoside 2-deoxyribosyltransferase YP_355155.1 IMG reference gene:2512957176; PFAM: ExsB; TIGRFAM: queuosine biosynthesis protein QueC YP_355156.1 IMG reference gene:2512957177 YP_355157.1 IMG reference gene:2512957178; PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative YP_355158.1 IMG reference gene:2512957179 YP_355159.2 IMG reference gene:2512957180; extended by 14 aa YP_008686475.1 IMG reference gene:2512957181; new gene YP_355160.1 IMG reference gene:2512957182 YP_355161.1 IMG reference gene:2512957183 YP_355162.1 IMG reference gene:2512957186; PFAM: Peptidase family S49 YP_355163.1 IMG reference gene:2512957187; PFAM: Protein of unknown function (DUF1144) YP_355164.1 IMG reference gene:2512957188; PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family YP_355165.1 IMG reference gene:2512957189 YP_355166.1 IMG reference gene:2512957191; PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: 5-dehydro-4-deoxyglucarate dehydratase YP_355167.1 IMG reference gene:2512957192; PFAM: Aldehyde dehydrogenase family YP_355168.1 IMG reference gene:2512957193; PFAM: Demethylmenaquinone methyltransferase YP_355169.1 IMG reference gene:2512957194; PFAM: HpcH/HpaI aldolase/citrate lyase family YP_355170.1 IMG reference gene:2512957195; PFAM: Carbon-nitrogen hydrolase YP_355171.1 IMG reference gene:2512957196; PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family YP_355172.1 IMG reference gene:2512957197; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_355173.1 IMG reference gene:2512957198; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_355174.1 IMG reference gene:2512957199; PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_355175.1 IMG reference gene:2512957200 YP_355176.1 IMG reference gene:2512957201; PFAM: Bacterial regulatory proteins, luxR family; Autoinducer binding domain YP_355178.2 IMG reference gene:2512957202; PFAM: Domain of unknown function DUF11; TIGRFAM: conserved repeat domain; frameshift in old version eliminated; joined gene, RSP_3666, RSP_3667 YP_355179.1 IMG reference gene:2512957203 YP_355180.1 IMG reference gene:2512957204; PFAM: Oxidoreductase family, NAD-binding Rossmann fold YP_355181.1 IMG reference gene:2512957205; PFAM: Xylose isomerase-like TIM barrel YP_355182.1 IMG reference gene:2512957206; PFAM: Binding-protein-dependent transport system inner membrane component YP_355183.1 IMG reference gene:2512957207; PFAM: Binding-protein-dependent transport system inner membrane component YP_355184.1 IMG reference gene:2512957208; PFAM: Bacterial extracellular solute-binding protein YP_355185.1 IMG reference gene:2512957209; PFAM: alpha/beta hydrolase fold YP_355186.1 IMG reference gene:2512957210; PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_355187.1 IMG reference gene:2512957211; PFAM: ABC transporter; TOBE domain YP_355188.1 IMG reference gene:2512957212; PFAM: Siderophore-interacting protein; Siderophore-interacting FAD-binding domain YP_355189.1 IMG reference gene:2512957214 YP_355190.1 IMG reference gene:2512957215; PFAM: Bacterial regulatory proteins, tetR family YP_355191.2 IMG reference gene:2512957216; PFAM: HI0933-like protein; NADH:flavin oxidoreductase / NADH oxidase family; frameshift in old version eliminated, translation corrected; truncated by 10 aa YP_355192.1 IMG reference gene:2512957217 YP_355193.1 IMG reference gene:2512957218 YP_355194.2 IMG reference gene:2512957219; PFAM: Bacterial regulatory proteins, luxR family; Autoinducer binding domain; truncated by 19 aa YP_355195.1 IMG reference gene:2512957220; PFAM: Domain of unknown function (DUF2383); TIGRFAM: conserved hypothetical protein YP_355196.1 IMG reference gene:2512957221 YP_355197.1 IMG reference gene:2512957222; PFAM: Bacterial regulatory proteins, lacI family; family YP_355198.1 IMG reference gene:2512957223; PFAM: family YP_355199.1 IMG reference gene:2512957224; PFAM: ABC transporter YP_355200.1 IMG reference gene:2512957225; PFAM: Branched-chain amino acid transport system / permease component YP_355201.1 IMG reference gene:2512957226; PFAM: Phosphotriesterase family YP_355202.1 IMG reference gene:2512957227; PFAM: Protein of unknown function (DUF1355) YP_355203.1 IMG reference gene:2512957228; PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase YP_355204.1 IMG reference gene:2512957229; PFAM: BtpA family; TIGRFAM: membrane complex biogenesis protein, BtpA family YP_355205.1 IMG reference gene:2512957230; PFAM: TENA/THI-4/PQQC family YP_355206.1 IMG reference gene:2512957231; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain YP_355207.1 IMG reference gene:2512957232; PFAM: ABC transporter; TIGRFAM: sulfate ABC transporter, ATP-binding protein YP_355208.1 IMG reference gene:2512957233; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: sulfate/thiosulfate-binding protein YP_355209.1 IMG reference gene:2512957234; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permease protein; sulfate ABC transporter, permease protein CysT YP_355210.1 IMG reference gene:2512957235; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permease protein CysW; sulfate ABC transporter, permease protein YP_355211.1 IMG reference gene:2512957236; PFAM: Bacterial regulatory proteins, lacI family; family YP_355212.1 IMG reference gene:2512957237; PFAM: family YP_355213.1 IMG reference gene:2512957238; PFAM: ABC transporter YP_355214.2 IMG reference gene:2512957239; PFAM: Branched-chain amino acid transport system / permease component YP_355215.1 IMG reference gene:2512957240; PFAM: short chain dehydrogenase YP_355216.1 IMG reference gene:2512957241; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: FGGY-family pentulose kinase YP_355217.1 IMG reference gene:2512957242 YP_355218.1 IMG reference gene:2512957243; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Cyclic nucleotide-binding domain YP_355219.1 IMG reference gene:2512957244; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_355220.1 IMG reference gene:2512957245; PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; TC 2.A.63.1.1 YP_355221.1 IMG reference gene:2512957246; PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF); TC 2.A.63.1.1 YP_355222.1 IMG reference gene:2512957247; PFAM: Na+/H+ ion antiporter subunit; TC 2.A.63.1.1 YP_355223.2 IMG reference gene:2512957248; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TC 2.A.63.1.1 YP_355224.1 IMG reference gene:2512957249; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; TIGRFAM: Multicomponent Na+:H+ antiporter, MnhC subunit; TC 2.A.63.1.1 YP_355225.1 IMG reference gene:2512957250; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; Domain related to MnhB subunit of Na+/H+ antiporter; TIGRFAM: Tmonovalent cation:proton antiporter; monovalent cation:proton antiporter; TC 2.A.63.1.1 YP_355226.1 IMG reference gene:2512957251; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: selenium donor protein YP_355227.1 IMG reference gene:2512957252 YP_355228.1 IMG reference gene:2512957253; PFAM: GMC oxidoreductase YP_355229.2 IMG reference gene:2512957254; PFAM: Polysaccharide biosynthesis protein; extended by 54 aa YP_355230.1 IMG reference gene:2512957255 YP_355231.1 IMG reference gene:2512957256; PFAM: Glycosyl transferases group 1 YP_355232.1 IMG reference gene:2512957257 YP_355233.1 IMG reference gene:2512957258; PFAM: Acyltransferase family YP_355234.1 IMG reference gene:2512957259; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_355235.1 IMG reference gene:2512957260; PFAM: Dynamin family YP_355236.2 IMG reference gene:2512957261; PFAM: Dynamin family; truncated by 105 aa YP_355237.1 IMG reference gene:2512957262; PFAM: Flavodoxin-like fold YP_355238.2 IMG reference gene:2512957263; truncated by 55 aa YP_355239.1 IMG reference gene:2512957264; PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain YP_355240.2 IMG reference gene:2512957265; PFAM: Bacterial regulatory proteins, deoR family; truncated by 15 aa YP_355241.1 IMG reference gene:2512957266; PFAM: family YP_355242.1 IMG reference gene:2512957267; PFAM: ABC transporter YP_355243.1 IMG reference gene:2512957268; PFAM: Branched-chain amino acid transport system / permease component YP_355244.1 IMG reference gene:2512957269; PFAM: Branched-chain amino acid transport system / permease component YP_355245.1 IMG reference gene:2512957270 YP_355246.1 IMG reference gene:2512957271; PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase YP_355247.1 IMG reference gene:2512957272; PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase YP_355248.1 IMG reference gene:2512957273; PFAM: Aldehyde dehydrogenase family YP_355249.1 IMG reference gene:2512957274; PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_355250.1 IMG reference gene:2512957275; PFAM: Arginase family; TIGRFAM: agmatinase YP_355251.1 IMG reference gene:2512957276; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_355252.1 IMG reference gene:2512957277; PFAM: ABC transporter YP_355253.1 IMG reference gene:2512957278; PFAM: Domain of unknown function (DUF1989) YP_355254.1 IMG reference gene:2512957279; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain YP_355255.1 IMG reference gene:2512957280; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_355256.1 IMG reference gene:2512957281; PFAM: Beta-lactamase YP_355257.2 IMG reference gene:2512957282; extended by 26 aa YP_355258.1 IMG reference gene:2512957283 YP_355259.1 IMG reference gene:2512957284 YP_355260.1 IMG reference gene:2512957285 YP_355261.1 IMG reference gene:2512957286 YP_355262.1 IMG reference gene:2512957287; PFAM: RES domain YP_355263.2 IMG reference gene:2512957288; PFAM: UvrD/REP helicase; extended by 11 aa YP_355264.1 IMG reference gene:2512957289 YP_355265.2 IMG reference gene:2512957290; truncated by 24 aa YP_355266.1 IMG reference gene:2512957291; PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm) YP_355267.1 IMG reference gene:2512957292; PFAM: DNA mismatch endonuclease Vsr; TIGRFAM: DNA mismatch endonuclease Vsr YP_355268.1 IMG reference gene:2512957293 YP_355269.1 IMG reference gene:2512957294 YP_355270.1 IMG reference gene:2512957295; PFAM: D12 class N6 adenine-specific DNA methyltransferase YP_355271.2 IMG reference gene:2512957296 YP_355272.1 IMG reference gene:2512957297 YP_355273.1 IMG reference gene:2512957298 YP_355274.1 IMG reference gene:2512957299 YP_355275.1 IMG reference gene:2512957300 YP_355276.1 IMG reference gene:2512957301 YP_355277.1 IMG reference gene:2512957302 YP_355278.1 IMG reference gene:2512957303; PFAM: Domain of unknown function (DUF74) YP_008686476.1 IMG reference gene:2512957304; new gene; replaced RSP_3789 on the same strand YP_355280.1 IMG reference gene:2512957305 YP_355281.1 IMG reference gene:2512957306; PFAM: Phage tail protein YP_355282.1 IMG reference gene:2512957307 YP_355283.1 IMG reference gene:2512957308 YP_355284.1 IMG reference gene:2512957309 YP_355285.1 IMG reference gene:2512957310 YP_355286.1 IMG reference gene:2512957311; PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type YP_355287.1 IMG reference gene:2512957312; PFAM: Phage portal protein, lambda family; TIGRFAM: phage portal protein, lambda family YP_355288.1 IMG reference gene:2512957313 YP_355289.1 IMG reference gene:2512957314; PFAM: Phage terminase large subunit (GpA) YP_355290.2 IMG reference gene:2512957315; PFAM: Phage DNA packaging protein Nu1; Protein of unknown function (DUF1441); extended by 23 aa YP_355291.1 IMG reference gene:2512957316 YP_355292.2 IMG reference gene:2512957317; extended by 119 aa; frameshift in old version eliminated YP_355293.1 IMG reference gene:2512957318 YP_355294.1 IMG reference gene:2512957319 YP_355296.1 IMG reference gene:2512957321 YP_355297.1 IMG reference gene:2512957322; PFAM: Domain of unknown function (DUF1937) YP_355298.1 IMG reference gene:2512957323 YP_355299.1 IMG reference gene:2512957324 YP_008686477.1 IMG reference gene:2512957325; new gene YP_355300.2 IMG reference gene:2512957326; PFAM: Helix-turn-helix; truncated by 6 aa YP_008686478.1 IMG reference gene:2512957327; new gene YP_355301.1 IMG reference gene:2512957328 YP_355302.1 IMG reference gene:2512957329 YP_355303.1 IMG reference gene:2512957330 YP_355304.1 IMG reference gene:2512957331 YP_355305.1 IMG reference gene:2512957332; PFAM: Uncharacterized conserved protein (DUF2303) YP_008686479.1 IMG reference gene:2512957333; new gene YP_008686480.1 IMG reference gene:2512957334; new gene YP_008686481.1 IMG reference gene:2512957335; new gene YP_355306.1 IMG reference gene:2512957336; PFAM: Phage protein Gp37/Gp68 YP_008686482.1 IMG reference gene:2512957337; new gene YP_355307.1 IMG reference gene:2512957338 YP_355308.2 IMG reference gene:2512957339; extended by 39 aa YP_355309.1 IMG reference gene:2512957340 YP_355310.1 IMG reference gene:2512957342; PFAM: Phage integrase family YP_355311.1 IMG reference gene:2512957344; PFAM: Prokaryotic protein of unknown function (DUF849) YP_355312.1 IMG reference gene:2512957345; PFAM: Aminotransferase class-III YP_355313.1 IMG reference gene:2512957346; PFAM: Universal stress protein family YP_355315.1 IMG reference gene:2512957348; PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family YP_355316.1 IMG reference gene:2512957349; PFAM: SIS domain; Helix-turn-helix domain, rpiR family YP_355317.1 IMG reference gene:2512957350; PFAM: Polysaccharide deacetylase YP_355318.1 IMG reference gene:2512957351 YP_355319.1 IMG reference gene:2512957352; PFAM: Cobalamin synthesis protein cobW C-terminal domain; CobW/HypB/UreG, nucleotide-binding domain YP_355320.1 IMG reference gene:2512957353; PFAM: Tripartite tricarboxylate transporter TctA family YP_355321.1 IMG reference gene:2512957354; PFAM: Tripartite tricarboxylate transporter TctB family YP_355322.1 IMG reference gene:2512957355; PFAM: Tripartite tricarboxylate transporter family receptor YP_355323.1 IMG reference gene:2512957356 YP_355324.1 IMG reference gene:2512957357; PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins YP_355325.1 IMG reference gene:2512957358; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_355326.1 IMG reference gene:2512957359; PFAM: Initiator Replication protein YP_001033800.1 Citation: Zhong, Z. et. al. (2003) Plasmid, 49:233- 252. YP_001033801.1 Citation: Finan, T. M. et. al. (2001) Proc. Natl.Acad. Sci. USA 98: 9889-9894. YP_001033802.1 similar to predicted transcriptional regulator YP_001033803.1 Citation: Zhong, Z. et. al. (2003) Plasmid, 49:233- 252. Freiberg, C. et. al. (1997) Nature, 387:394-401. YP_001033804.1 COG5534 YP_001033805.1 Citation: Zhong, L. et. al. (1993) Mol. Micro.Biol. 9: 309-321. Morona, R. et. al. (1994) J. Bacteriol.176: 733-747. YP_001033807.1 Citation: Zhong, Z. et. al. (2003) Plasmid, 49:233- 252. Stevenson, G. et. al. (1994) J. Bacteriol. 176:4144- 4156. YP_001033808.1 Citation: Zhong, Z. et. al. (2003) Plasmid, 49:233- 252. YP_001033809.1 Citation: da Silva, A. C. R. et. al. (2002) Nature, 417: 459-463. Koplin, R. et. al. (1993) J. Bacteriol.175: 7786-7792. YP_001033810.1 Citation: Palenik, B. et. al. (2003) Nature, 424:1037-1042. YP_001033811.1 similar to BH3374 YP_001033812.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis YP_001033813.1 Citation: Vicek, C. et. al. (1997) Proc. Natl.Acad. Sci. USA 94: 9384-9388. YP_001033814.1 COG0845 YP_001033815.1 Citation: Vicek, C. et. al. (1997) Proc. Natl.Acad. Sci. USA 94: 9384-9388. YP_001033819.1 Citation: Goodner, B. et. al. (2001) Science, 294:2323-2328. YP_001033822.1 Citation: Kaneko, T. et. al. (2000) DNA Res. 7:331- 338. YP_001033823.1 Citation: Kaneko, T. et. al. (2000) DNA Res. 7:3331- 338. YP_001033824.1 Citation: Finan, T. M. et. al. (2001) Proc. Natl.Acad. Sci. USA 98: 9889-9894. YP_001033825.1 specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport YP_001033826.1 Citation: kaneko, T. et. al. (2000) DNA Res. 7:331- 338. YP_001033827.1 Citation: Wood, D. W. et. al. (2001) Science, 294:2317-2323. YP_001033829.1 Citation: Larbig, K. D. (2002) J. Bacteriol. 184:6665-6680.; hypervariable genomic region YP_001033831.1 Citation: Kaneko, T. et. al. (2000) DNA Res 7:331- 338. Luque, F. et. al. (1993) Mol. Microbiol. 7:447-459. YP_001033832.1 Citation: Wood, D. W. et. al. (2001) Science, 294:2317-2323. Rech, S. et. al. (1995) J. Bacteriol. 177:1023-1029. YP_001033833.1 Citation: Kaneko, T. et. al. (2000) DNA Res. 7:331- 338. YP_001033834.1 Citation: Kaneko, T. et. al. (2002) DNA Res. 9:189- 197. YP_001033835.1 Citation: Wang, G. et. al. (1993) J. bacteriol.175: 3031-3042. YP_001033838.1 Citation: Kaneko, T. et. al. (2002) DNA Res. 9:225- 256. YP_001033839.1 acts as an activator of flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum YP_001033840.1 post-transcriptional repressor of flagellum biosynthesis; promotes degradation of fljK mRNA: Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella YP_001033841.1 Citation: Delvecchio, V. G. et. al. (2002) Proc.Natl. Acad. Sci. USA 99: 443-448. YP_001033842.1 Citation: Takami, A. et. al. (1999) Exthermophiles, 3: 29-34. YP_001033843.1 Citation: Kaneko, T. et. al. (2002) DNA Res. 9:189- 197. YP_001033846.1 Citation: Kaneko, T. et. al. (2000) DNA Res. 7:331- 338. YP_001033847.1 also matches to conserved hypothetical protein; Citation: Wood, D. W. et. al. (2001) Science, 294:2317-2323. YP_001033848.1 also matches to 3-oxyacyl carrier protein; Citation: Nelson, K. E. et. al. (1999) Nature, 399:323-329. YP_001033849.1 Citation: Finan, T. M. et. al. (2001) Proc. Natl.Acad. Sci. USA 98: 9889-9894. YP_001033850.1 Citation: Delvecchio, V. G. et. al. (2002) Proc.Natl. Acad. Sci. USA, 99: 443-448. YP_001033851.1 Citation: Delvecchio, V. G. et. al. (2002) Proc.Natl. Acad. Sci. USA, 99: 443-448. YP_001033852.1 Citation: Goodner, B. et. al. (2001) Science, 294:2323-2328. YP_001033853.1 Citation: Youn, H. et. al. (1998) Biochim. Biophys.Acta, 1388: 405-418. YP_001033854.1 Citation: Goodner, B. et. al. (2001) Science, 294:2323-2328. YP_001033855.1 COG2929 YP_001033859.1 Citation: Freiberg, C. et. al. (1997) Nature, 387:394-401. YP_001033862.1 TraD congugative transfer coupling protein; Citation: Gomis-Ruth FX, et al. The bacterialconjugation protein TrwB resembles ring helicases andF1-ATPase. Nature. 2001 Feb 1;409(6820):637-41. PMID:11214325 Chen, C. Y. et. al. (2003) Genome Res. 13:2577-2587.; similar to TraD F factor (AAC44181);characteristic predicted transmembrane domains (29-51,116-138) and NTP-binding motifs: Walker A (205-212, GTVGVGKT) and Walker B (428-433, WFFLDE) YP_001033863.1 relaxase-helicase for conjugative transfer; Citation: Guasch A, et al. Nat Struct Biol. 2003Dec;10(12):1002-10. PMID: 14625590. Bradshaw, H. D. et.al. (1990) J. bacteriol. 172: 4127-4131. Llosa, M. et.al. (1994) J. Mol. Biol. 235: 448-464.; similar to TraI of F factor (AAC44186) YP_001033866.1 Citation: Hirayama, T. et. al. (1988) Mol. Gen.Genet. 213: 229-237. YP_001033867.1 probable homologue to gene 32 protein of Fplasmid; Citation: Salanoubat, M. et. al. (2002) Nature,415: 497-502. YP_001033868.1 Citation: Burtosik, D. et. al. (1997) Plasmid, 38:53-59.; similar to RepC2 of pSymA (NP_436538) YP_001033872.1 produces ATP from ADP in the presence of a proton gradient across the membrane; subunit A is part of the membrane proton channel F0 YP_001033874.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex YP_001033875.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the beta chain is a regulatory subunit YP_001033877.1 Citation: Wood, D. W. et. al. (2001) Science, 294:2317-2323. YP_001033878.1 Citation: Zhong, Z. et. al. (2003) Plasmid, 49:233- 252. YP_001033881.1 also matches to rhizobiocin; Citation: Twelker, S. et. al. (2001) Canadian J.Microbiol. 47: 495-502. YP_001033883.1 Citation: Zhong, Z. et. al. (2003) Plasmid, 49:233- 252. YP_001033886.1 Citation: Finan, T. M. et. al. (2001) Proc. Natl.Acad. Sci. USA, 98:9889-9894. YP_001033887.1 Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation YP_001033891.1 COG3238 YP_001033896.1 also matches to esterase of the alpha/beta hydrolase family. YP_001033900.1 COG1120 YP_001033901.1 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome YP_001033902.1 Citation: Coulton, J. W. et. al. (1987) J. Bacteriol., 169: 3844-3849. YP_001033903.1 Citation: Coulton, J. W. et. al. (1986) J. Bacteriol. 165: 181-192. YP_001033905.1 also matches to sigma 24 homologue/ECF subfamily YP_001033906.1 Citation: Grass, G. et. al. (2002) J. Bacteriol. 183: 4664-4667. YP_001033910.1 similar to RSc1812 from Ralstonia solanacearum GMI1000 YP_001033913.1 also matches to transposase YP_001033915.1 also matches to transposases