-- dump date 20140620_025008 -- class Genbank::CDS -- table cds_note -- id note YP_007588424.1 PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA YP_007588425.1 PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit YP_007588426.1 TIGRFAM: recF protein YP_007588427.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit YP_007588429.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_007588430.1 PFAM: MotA/TolQ/ExbB proton channel family YP_007588431.1 PFAM: Biopolymer transport protein ExbD/TolR YP_007588432.1 PFAM: Biopolymer transport protein ExbD/TolR YP_007588433.1 PFAM: Pyridoxal phosphate biosynthesis protein PdxJ; TIGRFAM: pyridoxine 5'-phosphate synthase YP_007588434.1 PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantetheine--protein transferase domain YP_007588435.1 PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007588436.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_007588437.1 PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase YP_007588439.1 PFAM: Sugar (and other) transporter YP_007588440.1 PFAM: Transglycosylase associated protein YP_007588441.1 PFAM: AMP-binding enzyme YP_007588443.1 PFAM: Radical SAM superfamily YP_007588445.1 PFAM: ABC transporter YP_007588446.1 PFAM: Bacterial regulatory proteins, gntR family YP_007588447.1 PFAM: Prolyl oligopeptidase family; WD40-like Beta Propeller Repeat YP_007588448.1 PFAM: Patatin-like phospholipase YP_007588449.1 PFAM: Fructose-1-6-bisphosphatase YP_007588450.1 PFAM: DJ-1/PfpI family YP_007588452.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain YP_007588453.1 PFAM: HTH domain YP_007588454.1 PFAM: Bacterial protein of unknown function (DUF885) YP_007588455.1 PFAM: Protein of unknown function (DUF2384) YP_007588456.1 PFAM: RES domain YP_007588457.1 PFAM: GDSL-like Lipase/Acylhydrolase; manually curated YP_007588458.1 PFAM: Biopterin-dependent aromatic amino acid hydroxylase; TIGRFAM: phenylalanine-4-hydroxylase, monomeric form YP_007588459.1 PFAM: AsnC family YP_007588460.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_007588462.1 PFAM: Glycosyl hydrolase family 92; TIGRFAM: alpha-1,2-mannosidase, putative YP_007588463.1 PFAM: 2OG-Fe(II) oxygenase superfamily YP_007588466.1 manually curated YP_007588469.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_007588470.1 PFAM: Glucose / Sorbosone dehydrogenase YP_007588471.1 PFAM: GIY-YIG catalytic domain YP_007588472.1 PFAM: Phosphatidylethanolamine-binding protein; TIGRFAM: Raf kinase inhibitor-like protein, YbhB/YbcL family YP_007588473.1 PFAM: Protein of unknown function (DUF1328) YP_007588474.1 PFAM: Bacterial protein of unknown function (DUF883) YP_007588477.1 PFAM: Domain of unknown function DUF20 YP_007588479.1 PFAM: Cupin domain YP_007588480.1 PFAM: WD40-like Beta Propeller Repeat YP_007588481.1 PFAM: WD40-like Beta Propeller Repeat YP_007588482.1 PFAM: Nucleotidyltransferase domain YP_007588484.1 PFAM: Ribbon-helix-helix protein, copG family YP_007588485.1 PFAM: Plasmid stabilisation system protein YP_007588487.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_007588488.1 PFAM: Putative cyclase YP_007588490.1 PFAM: short chain dehydrogenase YP_007588491.1 PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family YP_007588492.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family YP_007588493.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_007588494.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_007588495.1 PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP YP_007588496.1 PFAM: Bacterial protein of unknown function (Gcw_chp); TIGRFAM: conserved hypothetical protein, proteobacterial YP_007588497.1 PFAM: Nitrogen regulatory protein P-II YP_007588498.1 PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter; TC 1.A.11 YP_007588499.1 PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I YP_007588502.1 PFAM: Carbohydrate-selective porin, OprB family YP_007588503.1 PFAM: Cytochrome c YP_007588504.1 PFAM: GMC oxidoreductase; FAD dependent oxidoreductase YP_007588505.1 PFAM: Membrane bound FAD containing D-sorbitol dehydrogenase YP_007588506.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_007588507.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007588508.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent receptor YP_007588509.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat; manually curated YP_007588510.1 PFAM: DoxX YP_007588511.1 PFAM: NADPH-dependent FMN reductase YP_007588512.1 PFAM: Ferritin-like domain YP_007588513.1 PFAM: NmrA-like family YP_007588514.1 PFAM: Aldehyde dehydrogenase family YP_007588515.1 PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase YP_007588516.1 PFAM: Amidohydrolase family YP_007588517.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase YP_007588518.1 PFAM: DSBA-like thioredoxin domain YP_007588519.1 PFAM: AhpC/TSA family YP_007588521.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007588522.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: nitrogen regulation protein NR(I) YP_007588523.1 PFAM: Glycosyltransferase family 36; Putative carbohydrate binding domain; Glycosyltransferase 36 associated family YP_007588524.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2329) YP_007588525.1 PFAM: 6-phosphogluconate dehydrogenase, C-terminal domain; NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 6-phosphogluconate dehydrogenase (decarboxylating) YP_007588526.1 PFAM: Protein of unknown function, DUF488 YP_007588527.1 PFAM: Protein of unknown function (DUF2945) YP_007588529.1 manually curated YP_007588530.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_007588531.1 PFAM: Histidine kinase YP_007588532.1 PFAM: Phospholipase/Carboxylesterase YP_007588533.1 PFAM: Gram-negative bacterial tonB protein YP_007588534.1 PFAM: Gram-negative bacterial tonB protein YP_007588536.1 PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family YP_007588537.1 PFAM: Prolyl oligopeptidase family; WD40-like Beta Propeller Repeat; Dipeptidyl peptidase IV (DPP IV) N-terminal region YP_007588541.1 PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I YP_007588542.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007588543.1 PFAM: Redoxin YP_007588544.1 PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase YP_007588545.1 PFAM: Dehydratase family; TIGRFAM: 6-phosphogluconate dehydratase YP_007588546.1 PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: 6-phosphogluconolactonase YP_007588547.1 PFAM: Glucose-6-phosphate dehydrogenase, NAD binding domain; Glucose-6-phosphate dehydrogenase, C-terminal domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase YP_007588548.1 PFAM: Bacterial regulatory proteins, gntR family; UTRA domain YP_007588549.1 PFAM: SIS domain YP_007588551.1 PFAM: Amidohydrolase family; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase YP_007588552.1 PFAM: Sulfotransferase domain YP_007588553.1 PFAM: Sulfotransferase domain YP_007588554.1 PFAM: Sulfotransferase domain YP_007588555.1 PFAM: TonB-dependent Receptor Plug Domain YP_007588556.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent vitamin B12 receptor YP_007588557.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; manually curated; non-canonical start codon YP_007588558.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family YP_007588559.1 PFAM: Major Facilitator Superfamily YP_007588561.1 PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16) YP_007588562.1 PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16) YP_007588563.1 PFAM: Lipid A 3-O-deacylase (PagL) YP_007588564.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_007588565.1 PFAM: HlyD family secretion protein; TIGRFAM: efflux pump membrane protein (multidrug resistance protein A) YP_007588566.1 PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family YP_007588567.1 PFAM: MarR family YP_007588570.1 PFAM: AcrB/AcrD/AcrF family YP_007588571.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_007588572.1 PFAM: Domain of unknown function DUF302 YP_007588573.1 PFAM: Protein of unknown function (DUF2892) YP_007588574.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_007588576.1 PFAM: Metallo-beta-lactamase superfamily YP_007588577.1 PFAM: EamA-like transporter family YP_007588578.1 PFAM: Serine carboxypeptidase YP_007588579.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_007588580.1 PFAM: Major Facilitator Superfamily; TIGRFAM: glucose/galactose transporter YP_007588581.1 PFAM: Glucokinase; TIGRFAM: glucokinase, proteobacterial type YP_007588582.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent receptor YP_007588583.1 PFAM: Glycosyl hydrolase family 20, catalytic domain; Glycosyl hydrolase family 20, domain 2 YP_007588584.1 PFAM: Protein of unknown function (DUF1624) YP_007588585.1 PFAM: CAAX amino terminal protease family; manually curated YP_007588588.1 PFAM: Helicase conserved C-terminal domain; DEAD/H associated; DEAD/DEAH box helicase YP_007588589.1 PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain YP_007588590.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_007588592.1 PFAM: Putative lysophospholipase YP_007588593.1 PFAM: MG2 domain; Alpha-2-macroglobulin family; Alpha-2-macroglobulin MG1 domain; Alpha-2-macroglobulin family N-terminal region YP_007588595.1 PFAM: Penicillin-Binding Protein C-terminus Family; Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein 1C YP_007588596.1 PFAM: Outer membrane efflux protein YP_007588597.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_007588598.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium) YP_007588600.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007588601.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007588602.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; TIGRFAM: Multicomponent Na+:H+ antiporter, MnhC subunit YP_007588603.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains YP_007588604.1 PFAM: Na+/H+ ion antiporter subunit YP_007588605.1 PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF) YP_007588606.1 PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; TC 2.A.63.1.1 YP_007588607.1 PFAM: Fic/DOC family YP_007588608.1 PFAM: CsbD-like YP_007588609.1 PFAM: Lipocalin-like domain YP_007588610.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase YP_007588611.1 PFAM: Protein of unknown function (DUF1295) YP_007588612.1 PFAM: Protein of unknown function (DUF2878) YP_007588613.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase YP_007588614.1 PFAM: Protein of unknown function (DUF1365) YP_007588615.1 PFAM: Flavin containing amine oxidoreductase YP_007588616.1 PFAM: Fatty acid desaturase YP_007588617.1 PFAM: TspO/MBR family YP_007588618.1 PFAM: FAD binding domain of DNA photolyase; DNA photolyase YP_007588619.1 TIGRFAM: anti-sigma factor, putative, ChrR family YP_007588620.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007588622.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_007588623.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Electron transfer flavoprotein-ubiquinone oxidoreductase YP_007588624.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_007588625.1 PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup YP_007588626.1 PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein YP_007588627.1 PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit YP_007588630.1 PFAM: Aspartyl/Asparaginyl beta-hydroxylase YP_007588632.1 PFAM: Protein of unknown function (DUF3592); manually curated YP_007588634.1 PFAM: Autotransporter beta-domain; Putative Ig domain YP_007588635.1 PFAM: Phage Tail Collar Domain YP_007588636.1 PFAM: Phage Tail Collar Domain YP_007588637.1 PFAM: Phage Tail Collar Domain YP_007588638.1 PFAM: Acetyltransferase (GNAT) family YP_007588640.1 PFAM: Sigma-70, region 4; Sigma-70, non-essential region; Sigma-70 region 3; Sigma-70 factor, region 1.1; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain YP_007588641.1 PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_007588642.1 PFAM: Bacterial lipid A biosynthesis acyltransferase YP_007588643.1 PFAM: short chain dehydrogenase YP_007588646.1 PFAM: Uncharacterized ACR, COG1565 YP_007588647.1 PFAM: VanZ like family YP_007588648.1 PFAM: Sulfatase YP_007588649.1 PFAM: Poly A polymerase head domain YP_007588650.1 PFAM: RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies) YP_007588651.1 PFAM: CAAX amino terminal protease family YP_007588653.1 PFAM: IS66 Orf2 like protein YP_007588654.1 PFAM: Transposase IS66 family YP_007588655.1 PFAM: Transposase DDE domain YP_007588657.1 PFAM: RibD C-terminal domain YP_007588658.1 PFAM: Protein of unknown function (DUF1501) YP_007588659.1 PFAM: Protein of unknown function (DUF1800) YP_007588660.1 PFAM: Sulfotransferase domain; Tetratricopeptide repeat YP_007588661.1 PFAM: NAD dependent epimerase/dehydratase family YP_007588662.1 PFAM: Transglycosylase SLT domain YP_007588663.1 PFAM: Glycosyl hydrolases family 17 YP_007588665.1 PFAM: Endonuclease/Exonuclease/phosphatase family YP_007588666.1 PFAM: DSBA-like thioredoxin domain YP_007588667.1 PFAM: DSBA-like thioredoxin domain YP_007588668.1 PFAM: Cytochrome c YP_007588669.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB YP_007588671.1 PFAM: GAF domain YP_007588674.1 PFAM: Pyridoxamine 5'-phosphate oxidase; GAF domain YP_007588676.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: dethiobiotin synthase YP_007588678.1 PFAM: Peptidase family M3 YP_007588679.1 PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family; TC 2.A.37.1 YP_007588681.1 PFAM: YcgL domain YP_007588682.1 PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX) YP_007588683.1 PFAM: Aldehyde dehydrogenase family YP_007588684.1 PFAM: Proline dehydrogenase; Aldehyde dehydrogenase family; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) YP_007588685.1 PFAM: Integral membrane protein (DUF2244) YP_007588686.1 PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome C oxidase subunit II, transmembrane domain; TIGRFAM: cytochrome c oxidase, subunit II YP_007588687.1 PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, subunit I YP_007588689.1 PFAM: Cytochrome c oxidase subunit III YP_007588690.1 PFAM: Protein of unknown function (DUF2909) YP_007588691.1 PFAM: SURF1 family YP_007588693.1 PFAM: Cytochrome oxidase assembly protein YP_007588694.1 PFAM: UbiA prenyltransferase family; TIGRFAM: protoheme IX farnesyltransferase YP_007588696.1 PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; haloacid dehalogenase-like hydrolase; Cation transporter/ATPase, N-terminus; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase YP_007588698.1 PFAM: Sodium Bile acid symporter family YP_007588699.1 PFAM: SNARE associated Golgi protein YP_007588700.1 PFAM: Toprim domain; CHC2 zinc finger; DNA primase catalytic core, N-terminal domain; DNA primase DnaG DnaB-binding; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core YP_007588701.1 PFAM: Protein of unknown function (DUF1328) YP_007588703.1 PFAM: Yqey-like protein YP_007588704.1 PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21 YP_007588705.1 PFAM: Glycoprotease family; TIGRFAM: putative glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family YP_007588706.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase YP_007588707.1 PFAM: ABC-2 type transporter YP_007588708.1 PFAM: ABC transporter YP_007588709.1 PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain YP_007588711.1 PFAM: Spore Coat Protein U domain YP_007588712.1 PFAM: Fimbrial Usher protein YP_007588713.1 PFAM: Gram-negative pili assembly chaperone, N-terminal domain YP_007588714.1 PFAM: Spore Coat Protein U domain YP_007588717.1 PFAM: Helix-turn-helix YP_007588720.1 PFAM: ABC transporter YP_007588723.1 PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I YP_007588724.1 PFAM: RmuC family YP_007588725.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_007588727.1 PFAM: S-adenosylmethionine-dependent methyltransferase YP_007588729.1 PFAM: Glutathionylspermidine synthase YP_007588730.1 PFAM: Protein of unknown function (DUF1190) YP_007588731.1 PFAM: Phosphotransferase enzyme family YP_007588732.1 PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1 YP_007588733.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain YP_007588734.1 PFAM: Rhodanese-like domain YP_007588736.1 PFAM: Putative thioesterase (yiiD_Cterm); TIGRFAM: thioesterase domain, putative YP_007588737.1 PFAM: Uroporphyrinogen-III synthase HemD YP_007588738.1 PFAM: HemX YP_007588739.1 PFAM: HemY protein N-terminus YP_007588741.1 PFAM: UvrD/REP helicase; TIGRFAM: DNA helicase II YP_007588743.1 PFAM: 5'-3' exonuclease, C-terminal SAM fold; 3'-5' exonuclease; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A; TIGRFAM: DNA polymerase I YP_007588744.1 PFAM: Protein of unknown function (DUF2782) YP_007588746.1 PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_007588747.1 PFAM: Bacterial regulatory protein, Fis family YP_007588748.1 PFAM: Protein of unknown function (DUF3426); TIGRFAM: MJ0042 family finger-like domain YP_007588749.1 PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase YP_007588750.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit YP_007588751.1 PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_007588752.1 PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II YP_007588753.1 PFAM: AhpC/TSA family YP_007588754.1 PFAM: Disulphide bond corrector protein DsbC; Cytochrome C biogenesis protein transmembrane region YP_007588755.1 PFAM: EamA-like transporter family YP_007588756.1 PFAM: CutA1 divalent ion tolerance protein YP_007588757.1 PFAM: Chaperonin 10 Kd subunit YP_007588758.1 PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL YP_007588760.1 PFAM: Sulfatase YP_007588761.1 PFAM: GlnD PII-uridylyltransferase; Glutamate-ammonia ligase adenylyltransferase YP_007588762.1 PFAM: Protein of unknown function (DUF1022) YP_007588763.1 PFAM: Nitroreductase family YP_007588764.1 PFAM: YceI-like domain YP_007588765.1 PFAM: Yip1 domain YP_007588766.1 PFAM: Zinc-finger domain YP_007588767.1 PFAM: Glycosyl transferases group 1 YP_007588768.1 PFAM: O-Antigen ligase YP_007588769.1 PFAM: Glycosyl transferase family 2 YP_007588770.1 PFAM: Glycosyl transferases group 1 YP_007588771.1 PFAM: Polysaccharide deacetylase YP_007588772.1 PFAM: Bacterial lipid A biosynthesis acyltransferase; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase YP_007588773.1 PFAM: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) YP_007588774.1 PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family YP_007588775.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_007588776.1 PFAM: Bacterial regulatory proteins, tetR family YP_007588777.1 PFAM: Ferritin-like domain; TIGRFAM: bacterioferritin YP_007588778.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein YP_007588779.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2333) YP_007588780.1 PFAM: Inorganic pyrophosphatase YP_007588781.1 PFAM: 2OG-Fe(II) oxygenase superfamily YP_007588782.1 PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family YP_007588783.1 PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: vacuolar-type H(+)-translocating pyrophosphatase YP_007588784.1 PFAM: Domain of unknown function (DUF3315) YP_007588785.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_007588786.1 PFAM: Flavodoxin-like fold YP_007588787.1 PFAM: Phosphofructokinase YP_007588788.1 PFAM: Adenylate kinase; TIGRFAM: adenylate kinases YP_007588789.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase YP_007588790.1 PFAM: ATP-dependent protease La (LON) domain YP_007588791.1 PFAM: short chain dehydrogenase YP_007588792.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_007588793.1 PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine transaminases YP_007588794.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: lactoylglutathione lyase YP_007588795.1 PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase YP_007588796.1 PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase YP_007588797.1 PFAM: Rubredoxin YP_007588798.1 PFAM: Uncharacterized ACR, COG1430 YP_007588799.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase YP_007588800.1 PFAM: pfkB family carbohydrate kinase YP_007588801.1 PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family YP_007588802.1 PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC YP_007588803.1 PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD YP_007588804.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2 YP_007588805.1 PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA YP_007588806.1 TIGRFAM: lytic murein transglycosylase B YP_007588807.1 PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; Sporulation related domain; TIGRFAM: rare lipoprotein A YP_007588808.1 PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain YP_007588809.1 PFAM: Protein of unknown function (DUF493) YP_007588810.1 PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoate-protein ligase B YP_007588811.1 PFAM: Radical SAM superfamily; TIGRFAM: lipoate synthase YP_007588812.1 PFAM: C-terminal domain of tail specific protease (DUF3340); Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc) YP_007588813.1 PFAM: Sulfotransferase domain YP_007588814.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_007588815.1 PFAM: Aspartyl/Asparaginyl beta-hydroxylase YP_007588816.1 PFAM: Peptidase family M1 YP_007588817.1 PFAM: Cytosol aminopeptidase family, catalytic domain YP_007588818.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-haloalkanoic acid dehalogenase, type II YP_007588819.1 PFAM: LysM domain YP_007588820.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family YP_007588821.1 PFAM: Ribonucleotide reductase, barrel domain; TIGRFAM: intein N-terminal splicing region YP_007588824.1 PFAM: Macro domain YP_007588825.1 manually curated YP_007588828.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_007588829.1 PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm) YP_007588830.1 PFAM: DNA mismatch endonuclease Vsr; TIGRFAM: DNA mismatch endonuclease Vsr; manually curated YP_007588831.1 PFAM: Restriction endonuclease YP_007588832.1 manually curated YP_007588833.1 manually curated YP_007588834.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_007588835.1 PFAM: Prolyl oligopeptidase family YP_007588836.1 PFAM: Asparagine synthase YP_007588839.1 PFAM: H-NS histone family YP_007588840.1 PFAM: Bacterial regulatory proteins, gntR family YP_007588842.1 PFAM: Tetratricopeptide repeat YP_007588845.1 PFAM: Protein of unknown function (DUF1470); CGNR zinc finger YP_007588846.1 PFAM: Outer membrane protein (OmpH-like) YP_007588847.1 PFAM: Protein of unknown function (DUF3016) YP_007588848.1 PFAM: Thiopurine S-methyltransferase (TPMT); TIGRFAM: thiopurine S-methyltransferase, Se/Te detoxification family YP_007588849.1 PFAM: O-Glycosyl hydrolase family 30 YP_007588850.1 PFAM: Zinc carboxypeptidase YP_007588851.1 PFAM: DinB family YP_007588852.1 PFAM: Acetyltransferase (GNAT) family YP_007588853.1 PFAM: Integral membrane protein TerC family YP_007588854.1 PFAM: Hsp20/alpha crystallin family YP_007588858.1 PFAM: Peptidase family M3 YP_007588861.1 PFAM: Protein of unknown function (DUF454) YP_007588862.1 PFAM: Endonuclease/Exonuclease/phosphatase family YP_007588863.1 PFAM: Trehalase YP_007588866.1 PFAM: Putative peptidoglycan binding domain; L,D-transpeptidase catalytic domain YP_007588868.1 PFAM: Uncharacterised protein family UPF0066; TIGRFAM: putative methyltransferase, YaeB/AF_0241 family YP_007588869.1 PFAM: YCII-related domain YP_007588871.1 PFAM: haloacid dehalogenase-like hydrolase YP_007588873.1 PFAM: Trypsin; manually curated YP_007588874.1 TIGRFAM: putative toxin-antitoxin system toxin component, PIN family YP_007588876.1 PFAM: Isochorismatase family YP_007588879.1 PFAM: Phospholipase D Active site motif YP_007588881.1 PFAM: Cysteine dioxygenase type I YP_007588882.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_007588883.1 PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family YP_007588885.1 PFAM: Bacterial protein of unknown function (DUF885) YP_007588886.1 PFAM: Protein of unknown function (DUF456) YP_007588887.1 PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain YP_007588888.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_007588890.1 PFAM: Phage tail sheath protein YP_007588891.1 PFAM: T4-like virus tail tube protein gp19; TIGRFAM: conserved hypothetical phage tail region protein YP_007588895.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_007588902.1 PFAM: Putative peptidoglycan binding domain; CHAP domain YP_007588906.1 PFAM: Phage-related baseplate assembly protein YP_007588908.1 PFAM: Gene 25-like lysozyme YP_007588909.1 TIGRFAM: conserved hypothetical protein, phage tail-like region YP_007588910.1 TIGRFAM: conserved hypothetical protein, phage tail-like region YP_007588913.1 PFAM: Dihydrouridine synthase (Dus); TIGRFAM: tRNA dihydrouridine synthase A YP_007588915.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007588916.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_007588917.1 PFAM: Phosphoenolpyruvate:glucose-phosphotransferase regulator YP_007588919.1 PFAM: HTH domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region; BirA biotin operon repressor domain YP_007588920.1 PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III YP_007588921.1 PFAM: Sporulation related domain YP_007588924.1 PFAM: Protein of unknown function (DUF3617) YP_007588925.1 PFAM: Arginase family; TIGRFAM: arginase YP_007588926.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase YP_007588929.1 PFAM: MgtC family YP_007588931.1 PFAM: Protein of unknown function DUF45 YP_007588933.1 PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme YP_007588934.1 PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain YP_007588935.1 PFAM: Dehydrogenase E1 component; TIGRFAM: pyruvate dehydrogenase E1 component, alpha subunit YP_007588936.1 PFAM: Tryptophan 2,3-dioxygenase; TIGRFAM: tryptophan 2,3-dioxygenase YP_007588937.1 PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial YP_007588938.1 PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial YP_007588940.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase YP_007588941.1 PFAM: homogentisate 1,2-dioxygenase; TIGRFAM: homogentisate 1,2-dioxygenase YP_007588942.1 PFAM: Fumarylacetoacetate (FAA) hydrolase family YP_007588943.1 PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase YP_007588944.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_007588945.1 PFAM: NnrS protein YP_007588946.1 PFAM: Formylglycine-generating sulfatase enzyme YP_007588947.1 PFAM: SCO1/SenC YP_007588949.1 PFAM: Redoxin YP_007588950.1 PFAM: Bacterial-like globin YP_007588951.1 PFAM: Copper binding proteins, plastocyanin/azurin family; TIGRFAM: azurin YP_007588952.1 PFAM: Domain of unknown function (DUF3470); 4Fe-4S binding domain YP_007588953.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I YP_007588954.1 PFAM: S1/P1 Nuclease YP_007588955.1 PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase YP_007588956.1 PFAM: Gram-negative bacterial tonB protein YP_007588957.1 PFAM: Fructose-bisphosphate aldolase class-I YP_007588958.1 PFAM: OmpA-like transmembrane domain YP_007588959.1 PFAM: OmpA-like transmembrane domain YP_007588960.1 PFAM: OmpA-like transmembrane domain YP_007588961.1 PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast YP_007588962.1 PFAM: haloacid dehalogenase-like hydrolase YP_007588963.1 PFAM: Phosphoglycerate kinase YP_007588964.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; TIGRFAM: maleylacetoacetate isomerase YP_007588965.1 PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT YP_007588968.1 PFAM: Protein of unknown function (DUF465) YP_007588969.1 PFAM: CBS domain; Pyridoxal-phosphate dependent enzyme; TIGRFAM: cystathionine beta-synthase YP_007588970.1 PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing) YP_007588971.1 PFAM: Universal stress protein family YP_007588972.1 PFAM: Protein required for attachment to host cells YP_007588973.1 PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; haloacid dehalogenase-like hydrolase; Cation transporter/ATPase, N-terminus; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase YP_007588974.1 PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_007588975.1 PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase YP_007588976.1 PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase YP_007588977.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form YP_007588978.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase YP_007588979.1 PFAM: Cys/Met metabolism PLP-dependent enzyme YP_007588980.1 TIGRFAM: methyltransferase, FkbM family YP_007588981.1 PFAM: NAD dependent epimerase/dehydratase family YP_007588982.1 PFAM: Glycosyl transferases group 1 YP_007588984.1 PFAM: Glycosyl transferase family 2 YP_007588985.1 PFAM: Acyltransferase family YP_007588986.1 PFAM: ABC transporter YP_007588987.1 PFAM: ABC-2 type transporter YP_007588988.1 PFAM: Uncharacterized lipoprotein NlpE involved in copper resistance YP_007588989.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YP_007588990.1 PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain YP_007588991.1 PFAM: Electron transfer flavoprotein domain YP_007588992.1 PFAM: Glycosyl transferase family 2 YP_007588993.1 PFAM: Glycosyl transferase family 2 YP_007588994.1 PFAM: Lycopene cyclase protein; Electron transfer flavoprotein-ubiquinone oxidoreductase YP_007588995.1 PFAM: Amidase YP_007588996.1 PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: sulfate adenylyltransferase, small subunit YP_007588997.1 PFAM: Elongation factor Tu GTP binding domain; Adenylylsulphate kinase; TIGRFAM: adenylylsulfate kinase (apsK); sulfate adenylyltransferase, large subunit; sulfate adenylyltransferase subunit 1 YP_007588998.1 PFAM: Glycine cleavage T-protein C-terminal barrel domain; Aminomethyltransferase folate-binding domain; TIGRFAM: glycine cleavage system T protein YP_007588999.1 PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein YP_007589001.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_007589002.1 PFAM: Beta-lactamase YP_007589003.1 PFAM: LemA family YP_007589004.1 PFAM: Peptidase family M48 YP_007589005.1 PFAM: GMC oxidoreductase YP_007589006.1 PFAM: Major Facilitator Superfamily YP_007589007.1 PFAM: CBS domain YP_007589008.1 PFAM: Transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase YP_007589009.1 PFAM: Hsp33 protein YP_007589010.1 PFAM: EAL domain; GAF domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_007589014.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007589015.1 PFAM: Phosphoenolpyruvate carboxykinase YP_007589016.1 PFAM: Bacterial regulatory proteins, tetR family YP_007589018.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Domain of unknown function (DUF1974); Acyl-CoA dehydrogenase, N-terminal domain YP_007589020.1 PFAM: GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_007589021.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; GAF domain; His Kinase A (phosphoacceptor) domain; CHASE3 domain YP_007589022.1 PFAM: CAAX amino terminal protease family YP_007589023.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; peptide chain release factor 3 YP_007589024.1 PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: aspartate racemase YP_007589027.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain YP_007589028.1 PFAM: Domain of unknown function DUF YP_007589029.1 PFAM: TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent receptor YP_007589030.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain YP_007589031.1 PFAM: Metallopeptidase family M24 YP_007589032.1 PFAM: Protein of unknown function (DUF1304) YP_007589033.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2257) YP_007589034.1 PFAM: Pyridoxal-phosphate dependent enzyme YP_007589035.1 TIGRFAM: homoserine O-acetyltransferase YP_007589036.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: O-succinylhomoserine (thiol)-lyase YP_007589037.1 PFAM: Homoserine dehydrogenase, NAD binding domain; Homoserine dehydrogenase YP_007589038.1 PFAM: YceI-like domain YP_007589040.1 PFAM: Amino acid permease YP_007589041.1 PFAM: Type III restriction enzyme, res subunit YP_007589042.1 PFAM: Plasmid maintenance system killer protein YP_007589043.1 PFAM: Helix-turn-helix; TIGRFAM: addiction module antidote protein, HigA family YP_007589044.1 PFAM: DNA methylase YP_007589046.1 PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form YP_007589047.1 PFAM: Glutaredoxin-like domain (DUF836) YP_007589048.1 PFAM: GTPase of unknown function; Domain of unknown function (DUF697); TIGRFAM: small GTP-binding protein domain YP_007589049.1 PFAM: YceI-like domain YP_007589050.1 PFAM: Cytochrome b(N-terminal)/b6/petB YP_007589051.1 PFAM: YceI-like domain YP_007589052.1 PFAM: Polyprenyl synthetase YP_007589053.1 PFAM: Major Facilitator Superfamily YP_007589054.1 PFAM: Rhodanese-like domain; SNARE associated Golgi protein YP_007589055.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb) YP_007589056.1 PFAM: Subtilase family YP_007589058.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007589059.1 TIGRFAM: conserved hypothetical protein, proteobacterial YP_007589061.1 PFAM: WxcM-like, C-terminal YP_007589062.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family YP_007589065.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family YP_007589066.1 PFAM: Polysaccharide biosynthesis protein YP_007589067.1 PFAM: Glycosyl transferase family 2 YP_007589069.1 PFAM: Chain length determinant protein YP_007589071.1 PFAM: Amidohydrolase family YP_007589072.1 PFAM: Methyltransferase domain YP_007589073.1 PFAM: Radical SAM superfamily; B12 binding domain YP_007589074.1 PFAM: Glycosyl transferases group 1 YP_007589075.1 PFAM: Glycosyl transferases group 1 YP_007589076.1 PFAM: Methyltransferase domain YP_007589078.1 PFAM: Radical SAM superfamily; B12 binding domain YP_007589079.1 PFAM: HPr Serine kinase C-terminal domain YP_007589080.1 PFAM: AhpC/TSA family YP_007589081.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_007589082.1 TIGRFAM: DNA ligase D; DNA polymerase LigD, polymerase domain YP_007589083.1 PFAM: Peptidase family M1; Bacterial Ig-like domain (group 4) YP_007589084.1 PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) YP_007589085.1 PFAM: pfkB family carbohydrate kinase YP_007589086.1 PFAM: Major Facilitator Superfamily; TIGRFAM: glucose/galactose transporter; L-fucose:H+ symporter permease YP_007589087.1 PFAM: Glycosyl hydrolase family 92; TIGRFAM: alpha-1,2-mannosidase, putative YP_007589088.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; CHASE3 domain; TIGRFAM: PAS domain S-box YP_007589089.1 PFAM: Response regulator receiver domain YP_007589090.1 PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007589091.1 PFAM: Predicted permease YP_007589092.1 PFAM: Predicted permease YP_007589093.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_007589094.1 PFAM: Glycosyl hydrolase family 65 central catalytic domain; Glycosyl hydrolase family 65, N-terminal domain YP_007589095.1 PFAM: Major Facilitator Superfamily YP_007589096.1 PFAM: TonB-dependent Receptor Plug Domain YP_007589097.1 PFAM: Glycosyl hydrolase family 65, C-terminal domain; haloacid dehalogenase-like hydrolase; Glycosyl hydrolase family 65 central catalytic domain; Glycosyl hydrolase family 65, N-terminal domain; TIGRFAM: beta-phosphoglucomutase; haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; beta-phosphoglucomutase family hydrolase YP_007589098.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_007589099.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007589100.1 PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit YP_007589101.1 PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit YP_007589102.1 PFAM: NAD synthase; Carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase YP_007589103.1 TIGRFAM: outer membrane assembly lipoprotein YfiO YP_007589104.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family YP_007589105.1 PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family YP_007589106.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB YP_007589107.1 PFAM: Curli production assembly/transport component CsgG YP_007589108.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_007589109.1 PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family YP_007589110.1 PFAM: Protein of unknown function (DUF3011) YP_007589111.1 PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type YP_007589113.1 PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family YP_007589114.1 PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC YP_007589115.1 PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit YP_007589116.1 PFAM: K+ potassium transporter; TIGRFAM: potassium uptake protein YP_007589117.1 PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit YP_007589118.1 PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; tol-pal system-associated acyl-CoA thioesterase YP_007589119.1 PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: TolQ protein; TC 2.C.1.2.1 YP_007589120.1 PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TolR protein; TC 2.C.1.2.1 YP_007589121.1 TIGRFAM: TolA protein YP_007589122.1 PFAM: WD40-like Beta Propeller Repeat; TolB amino-terminal domain; TIGRFAM: tol-pal system beta propeller repeat protein TolB YP_007589123.1 PFAM: OmpA family; TIGRFAM: peptidoglycan-associated lipoprotein YP_007589124.1 PFAM: Tetratricopeptide repeat; TIGRFAM: tol-pal system protein YbgF YP_007589125.1 PFAM: Radical SAM superfamily YP_007589126.1 PFAM: ExsB; TIGRFAM: queuosine biosynthesis protein QueC YP_007589127.1 PFAM: HAMP domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007589130.1 TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_007589131.1 TIGRFAM: type IV pilus modification protein PilV YP_007589132.1 PFAM: Prokaryotic N-terminal methylation motif; Type II transport protein GspH; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; Verrucomicrobium spinosum paralogous family TIGR02596 YP_007589133.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_007589134.1 PFAM: SNARE associated Golgi protein YP_007589135.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_007589136.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase YP_007589138.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase YP_007589140.1 PFAM: Protein of unknown function (DUF3501) YP_007589142.1 PFAM: Rubrerythrin YP_007589143.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_007589144.1 PFAM: Peptidase family M1 YP_007589145.1 PFAM: Transposase DDE domain YP_007589147.1 PFAM: PHB de-polymerase C-terminus; TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular YP_007589148.1 PFAM: Methyltransferase domain YP_007589149.1 PFAM: RDD family YP_007589150.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD YP_007589151.1 PFAM: 2OG-Fe(II) oxygenase superfamily YP_007589152.1 PFAM: Disulfide bond isomerase protein N-terminus YP_007589153.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, single chain form YP_007589155.1 PFAM: Glycosyl transferase family 2 YP_007589156.1 PFAM: EamA-like transporter family YP_007589157.1 PFAM: Predicted membrane protein (DUF2127) YP_007589158.1 PFAM: Methyltransferase domain YP_007589159.1 PFAM: Protein of unknown function (DUF466) YP_007589161.1 PFAM: PEP-CTERM motif; Nidogen-like; TIGRFAM: PEP-CTERM protein sorting domain YP_007589162.1 PFAM: Protein of unknown function (DUF466) YP_007589163.1 PFAM: Carbon starvation protein CstA YP_007589165.1 PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase YP_007589166.1 PFAM: Acyltransferase family YP_007589168.1 PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2 YP_007589169.1 PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family YP_007589170.1 PFAM: Serine hydroxymethyltransferase YP_007589171.1 PFAM: Glutamine amidotransferase class-I YP_007589172.1 PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR YP_007589173.1 PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD; diaminohydroxyphosphoribosylaminopyrimidine deaminase YP_007589174.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_007589175.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_007589176.1 PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit YP_007589177.1 PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_007589178.1 PFAM: LD-carboxypeptidase YP_007589179.1 PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase YP_007589180.1 PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB YP_007589181.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: thiamine-monophosphate kinase YP_007589182.1 PFAM: Phosphatidylglycerophosphatase A YP_007589183.1 PFAM: NAD dependent epimerase/dehydratase family YP_007589184.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_007589185.1 PFAM: Aldo/keto reductase family; TIGRFAM: voltage-dependent potassium channel beta subunit, animal YP_007589186.1 PFAM: Hemin uptake protein hemP YP_007589188.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase / NADH oxidase family YP_007589189.1 PFAM: Amino acid permease YP_007589190.1 PFAM: Amidohydrolase family YP_007589191.1 PFAM: Rieske [2Fe-2S] domain YP_007589192.1 PFAM: Peptidase family S58 YP_007589193.1 PFAM: Prolyl oligopeptidase family; WD40-like Beta Propeller Repeat YP_007589194.1 PFAM: WD40-like Beta Propeller Repeat YP_007589195.1 PFAM: Aminotransferase class-III; TIGRFAM: 4-aminobutyrate aminotransferase, prokaryotic type YP_007589196.1 PFAM: Coenzyme A transferase YP_007589197.1 PFAM: Coenzyme A transferase YP_007589198.1 PFAM: Aldehyde dehydrogenase family YP_007589199.1 PFAM: Aminotransferase class-III YP_007589200.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator; TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family YP_007589201.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; 3-oxoadipyl-CoA thiolase YP_007589202.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain YP_007589203.1 PFAM: Sulfotransferase domain YP_007589204.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_007589205.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_007589206.1 PFAM: ABC transporter YP_007589207.1 PFAM: Predicted permease YP_007589208.1 PFAM: Predicted permease YP_007589209.1 PFAM: Predicted permease YP_007589210.1 PFAM: Predicted permease YP_007589211.1 PFAM: Predicted permease YP_007589212.1 PFAM: Predicted permease YP_007589213.1 PFAM: Predicted permease YP_007589214.1 PFAM: Predicted permease YP_007589215.1 PFAM: Predicted permease YP_007589216.1 PFAM: Predicted permease YP_007589217.1 PFAM: Predicted permease YP_007589218.1 PFAM: Bacterial protein of unknown function (DUF885) YP_007589219.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_007589221.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_007589222.1 PFAM: SPFH domain / Band 7 family YP_007589223.1 PFAM: NfeD-like YP_007589224.1 PFAM: Protein of unknown function (DUF1212) YP_007589225.1 PFAM: H-NS histone family YP_007589226.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain; Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II YP_007589228.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase YP_007589230.1 PFAM: Acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase YP_007589231.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase YP_007589233.1 PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase YP_007589235.1 PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase YP_007589236.1 PFAM: Shikimate kinase YP_007589237.1 PFAM: NAD dependent epimerase/dehydratase family YP_007589238.1 PFAM: Domain of unknown function (DUF74) YP_007589239.1 PFAM: Protein of unknown function (DUF1458) YP_007589241.1 PFAM: Pyridoxamine 5'-phosphate oxidase; Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region; TIGRFAM: pyridoxamine-phosphate oxidase YP_007589242.1 PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme YP_007589243.1 PFAM: Periplasmic binding protein YP_007589244.1 PFAM: YGGT family YP_007589245.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase YP_007589246.1 PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT YP_007589247.1 PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT YP_007589248.1 PFAM: Putative phospholipid-binding domain YP_007589249.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor YP_007589250.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007589251.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007589253.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase YP_007589254.1 PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF YP_007589255.1 PFAM: Uncharacterized ACR, COG1678 YP_007589256.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_007589257.1 PFAM: Prokaryotic glutathione synthetase, N-terminal domain; Prokaryotic glutathione synthetase, ATP-grasp domain; TIGRFAM: glutathione synthetase, prokaryotic YP_007589258.1 PFAM: Response regulator receiver domain YP_007589259.1 PFAM: Response regulator receiver domain YP_007589260.1 PFAM: CheW-like domain YP_007589261.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007589262.1 PFAM: CheW-like domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain YP_007589263.1 PFAM: CheB methylesterase YP_007589264.1 PFAM: CheW-like domain YP_007589265.1 PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family YP_007589267.1 PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase YP_007589268.1 PFAM: Bacterial type II secretion system protein N YP_007589269.1 PFAM: Inositol monophosphatase family; TIGRFAM: histidinol-phosphate phosphatase HisN, inositol monophosphatase family YP_007589270.1 PFAM: NUDIX domain YP_007589271.1 PFAM: Inositol monophosphatase family; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase, bacterial YP_007589272.1 PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein YP_007589274.1 PFAM: Protein of unknown function (DUF2807) YP_007589275.1 PFAM: Citrate transporter YP_007589276.1 PFAM: Predicted permease YP_007589277.1 PFAM: ABC transporter YP_007589278.1 PFAM: GDSL-like Lipase/Acylhydrolase YP_007589279.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007589280.1 PFAM: His Kinase A (phosphoacceptor) domain YP_007589281.1 PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; 3-oxoacid CoA-transferase, A subunit YP_007589282.1 PFAM: Penicillinase repressor YP_007589283.1 PFAM: BlaR1 peptidase M56 YP_007589284.1 PFAM: Asparaginase YP_007589287.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_007589288.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family YP_007589289.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007589290.1 PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial YP_007589291.1 PFAM: Prokaryotic diacylglycerol kinase YP_007589292.1 PFAM: LemA family YP_007589293.1 PFAM: Domain of unknown function (DUF477) YP_007589294.1 PFAM: Domain of unknown function (DUF477) YP_007589295.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_007589296.1 PFAM: Prolyl oligopeptidase family YP_007589297.1 PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase YP_007589298.1 PFAM: Protein of unknown function DUF124; TIGRFAM: TIGR00266 family protein YP_007589299.1 PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase YP_007589300.1 PFAM: Dihydrofolate reductase YP_007589301.1 PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase YP_007589302.1 PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family YP_007589303.1 PFAM: Protein of unknown function (DUF559) YP_007589304.1 PFAM: Bacterial type II secretion system protein F domain YP_007589305.1 PFAM: GSPII_E N-terminal domain; Type II/IV secretion system protein; TIGRFAM: type IV-A pilus assembly ATPase PilB YP_007589306.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family YP_007589307.1 PFAM: PIN domain YP_007589308.1 PFAM: Glycosyl transferase family 2 YP_007589309.1 PFAM: Glycosyl transferases group 1 YP_007589311.1 PFAM: Glycosyl transferase family 2 YP_007589313.1 PFAM: Glycosyl transferase family 2 YP_007589314.1 PFAM: Methyltransferase domain YP_007589315.1 PFAM: Polysaccharide biosynthesis protein YP_007589318.1 PFAM: Prokaryotic N-terminal methylation motif; Pilin (bacterial filament); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_007589319.1 PFAM: Prokaryotic N-terminal methylation motif; Pilin (bacterial filament); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_007589320.1 PFAM: Prolyl oligopeptidase family YP_007589321.1 PFAM: 5'-3' exonuclease, C-terminal SAM fold; 5'-3' exonuclease, N-terminal resolvase-like domain; manually curated YP_007589322.1 PFAM: Nitroreductase family YP_007589323.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric YP_007589324.1 PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: NAD(P) transhydrogenase, alpha subunit YP_007589325.1 PFAM: Protein of unknown function (DUF3106) YP_007589327.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007589329.1 PFAM: NAD(P) transhydrogenase beta subunit YP_007589331.1 PFAM: Domain of unknown function DUF59; TIGRFAM: probable FeS assembly SUF system protein SufT YP_007589332.1 PFAM: Fungalysin/Thermolysin Propeptide Motif; Thermolysin metallopeptidase, alpha-helical domain; Bacterial pre-peptidase C-terminal domain; Peptidase propeptide and YPEB domain; Thermolysin metallopeptidase, catalytic domain YP_007589333.1 PFAM: Asparaginase YP_007589334.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain YP_007589335.1 PFAM: Thioesterase superfamily YP_007589336.1 manually curated YP_007589338.1 PFAM: Predicted membrane protein (DUF2069) YP_007589339.1 PFAM: NADPH-dependent FMN reductase; TIGRFAM: NAD(P)H:quinone oxidoreductase, type IV YP_007589340.1 PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN) YP_007589341.1 PFAM: Redoxin YP_007589342.1 PFAM: Acylphosphatase YP_007589343.1 PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate kinase 2, PA0141 family YP_007589344.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1 YP_007589345.1 PFAM: Glutamyl-tRNAGlu reductase, N-terminal domain; Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase YP_007589346.1 PFAM: Tetratricopeptide repeat YP_007589347.1 PFAM: Outer membrane lipoprotein LolB; TIGRFAM: outer membrane lipoprotein LolB YP_007589348.1 PFAM: Acetyltransferase (GNAT) family; GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YP_007589349.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase YP_007589350.1 PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form YP_007589351.1 PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase YP_007589352.1 PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF YP_007589353.1 PFAM: HAMP domain; Cache domain; Stage II sporulation protein E (SpoIIE); STAS domain; TIGRFAM: anti-anti-sigma factor YP_007589354.1 PFAM: Thioesterase superfamily YP_007589355.1 PFAM: Elongation factor Tu C-terminal domain; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU YP_007589356.1 PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial YP_007589357.1 PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG YP_007589358.1 PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11 YP_007589359.1 PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast YP_007589360.1 PFAM: Ribosomal protein L10 YP_007589361.1 PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12 YP_007589362.1 PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 2; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit YP_007589363.1 PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 5; RNA polymerase Rpb1, domain 3; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form YP_007589364.1 PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle YP_007589365.1 PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle YP_007589366.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain YP_007589367.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU YP_007589368.1 PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle YP_007589369.1 PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial YP_007589370.1 PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle YP_007589371.1 PFAM: Ribosomal protein L23 YP_007589372.1 PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar YP_007589373.1 PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle YP_007589374.1 PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type YP_007589375.1 PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type YP_007589376.1 PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle YP_007589377.1 PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29 YP_007589378.1 PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17 YP_007589379.1 PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle YP_007589380.1 TIGRFAM: ribosomal protein L24, bacterial/organelle YP_007589381.1 PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5 YP_007589382.1 PFAM: Ribosomal protein S14p/S29e YP_007589383.1 PFAM: Ribosomal protein S8 YP_007589384.1 PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type YP_007589385.1 PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type YP_007589386.1 PFAM: Ribosomal protein S5, C-terminal domain; Ribosomal protein S5, N-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type YP_007589387.1 PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle YP_007589388.1 PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle YP_007589389.1 PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit YP_007589390.1 PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13 YP_007589391.1 PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11 YP_007589392.1 PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type YP_007589393.1 PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type YP_007589394.1 PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17 YP_007589395.1 PFAM: Disulfide bond formation protein DsbB YP_007589396.1 PFAM: Class-II DAHP synthetase family; TIGRFAM: 3-deoxy-7-phosphoheptulonate synthase, class II YP_007589398.1 PFAM: Amidase YP_007589399.1 PFAM: Cytochrome c YP_007589400.1 PFAM: Cytochrome c YP_007589401.1 PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: mismatch-specific thymine-DNA glycosylate (mug) YP_007589402.1 PFAM: ATP-binding region; TIGRFAM: MJ0570-related uncharacterized domain YP_007589403.1 PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family YP_007589404.1 TIGRFAM: TIGR02099 family protein YP_007589405.1 PFAM: Putative modulator of DNA gyrase YP_007589407.1 PFAM: Protein of unknown function (DUF615) YP_007589408.1 PFAM: Protein of unknown function (DUF1653) YP_007589409.1 PFAM: Putative modulator of DNA gyrase YP_007589411.1 PFAM: Polyprenyl synthetase YP_007589412.1 PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit YP_007589413.1 PFAM: TilS substrate C-terminal domain; PP-loop family; TilS substrate binding domain; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain YP_007589414.1 PFAM: Protein of unknown function DUF88 YP_007589415.1 PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit YP_007589416.1 PFAM: HNH endonuclease YP_007589417.1 PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc) YP_007589418.1 PFAM: Redoxin YP_007589420.1 PFAM: Ribonuclease HII YP_007589421.1 PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase YP_007589422.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase YP_007589423.1 PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ YP_007589424.1 PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_007589425.1 PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein YP_007589426.1 PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP YP_007589427.1 PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_007589428.1 PFAM: Cytidylyltransferase family YP_007589429.1 PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase YP_007589430.1 PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor YP_007589431.1 PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase YP_007589432.1 PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts YP_007589433.1 PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type YP_007589434.1 PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I YP_007589435.1 PFAM: GlnD PII-uridylyltransferase; HD domain; Nucleotidyltransferase domain; TIGRFAM: [Protein-PII] uridylyltransferase YP_007589436.1 PFAM: Uncharacterised protein family (UPF0093); TIGRFAM: TIGR00701 family protein YP_007589437.1 PFAM: NAD dependent epimerase/dehydratase family YP_007589438.1 PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase YP_007589439.1 PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3 YP_007589440.1 PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35 YP_007589441.1 PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20 YP_007589442.1 PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit YP_007589443.1 PFAM: tRNA synthetase B5 domain; Ferredoxin-fold anticodon binding domain; B3/4 domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial YP_007589444.1 PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, alpha subunit YP_007589445.1 PFAM: MerR family regulatory protein YP_007589446.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_007589447.1 PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain YP_007589448.1 PFAM: alpha/beta hydrolase fold; TIGRFAM: proline iminopeptidase, Neisseria-type subfamily YP_007589449.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase YP_007589450.1 PFAM: psiF repeat YP_007589451.1 PFAM: Aminotransferase class-III YP_007589452.1 PFAM: ABC transporter YP_007589454.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_007589455.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_007589456.1 PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_007589457.1 PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming YP_007589458.1 PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit YP_007589459.1 PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family YP_007589460.1 PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF YP_007589461.1 PFAM: Nucleotidyl transferase YP_007589462.1 PFAM: Phosphotransferase enzyme family YP_007589463.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; FeS assembly SUF system regulator, gammaproteobacterial YP_007589464.1 PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB YP_007589465.1 PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC YP_007589466.1 PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD YP_007589467.1 PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufSfamily YP_007589468.1 PFAM: Acyltransferase YP_007589469.1 PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase YP_007589470.1 PFAM: Peptidase family M13 YP_007589471.1 PFAM: Acetyltransferase (GNAT) family YP_007589472.1 PFAM: Rieske [2Fe-2S] domain YP_007589473.1 PFAM: CAAX amino terminal protease family YP_007589474.1 PFAM: MltA-interacting protein MipA YP_007589475.1 TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase YP_007589476.1 PFAM: Aminotransferase class-III YP_007589478.1 PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II YP_007589479.1 PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein YP_007589480.1 PFAM: Protein of unknown function, DUF482 YP_007589481.1 PFAM: Arginase family YP_007589482.1 PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase YP_007589483.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family YP_007589484.1 PFAM: EamA-like transporter family YP_007589485.1 PFAM: EamA-like transporter family YP_007589487.1 PFAM: HlyD family secretion protein YP_007589488.1 PFAM: ABC transporter YP_007589489.1 PFAM: Predicted permease YP_007589490.1 PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family YP_007589491.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Two-component sensor kinase N-terminal YP_007589492.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007589493.1 PFAM: Flavodoxin; Oxidoreductase NAD-binding domain YP_007589496.1 PFAM: Acetyltransferase (GNAT) family YP_007589498.1 TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region YP_007589499.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain YP_007589500.1 PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family YP_007589501.1 PFAM: NlpC/P60 family YP_007589502.1 PFAM: Rhomboid family YP_007589503.1 PFAM: Amino acid permease YP_007589504.1 PFAM: Helicase conserved C-terminal domain; RNA polymerase recycling family C-terminal; SNF2 family N-terminal domain YP_007589505.1 PFAM: Peptidase family M13 YP_007589506.1 PFAM: Zinc carboxypeptidase YP_007589507.1 PFAM: Protein of unknown function (DUF502) YP_007589508.1 PFAM: Nuclease-related domain YP_007589509.1 PFAM: Type III restriction enzyme, res subunit YP_007589510.1 PFAM: DNA methylase YP_007589511.1 PFAM: Phosphoribosyl transferase domain YP_007589514.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007589519.1 PFAM: Thioredoxin; TIGRFAM: thioredoxin YP_007589520.1 PFAM: Paraquat-inducible protein A YP_007589521.1 PFAM: Paraquat-inducible protein A YP_007589522.1 PFAM: mce related protein YP_007589523.1 PFAM: Protein of unknown function (DUF330) YP_007589524.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family YP_007589525.1 PFAM: Rare lipoprotein B family YP_007589526.1 PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit YP_007589527.1 PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain YP_007589528.1 PFAM: Nuclease-related domain; UvrD/REP helicase YP_007589529.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2236) YP_007589530.1 PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase YP_007589531.1 PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, OsmC subfamily YP_007589533.1 PFAM: Protein of unknown function (DUF1345) YP_007589534.1 TIGRFAM: pentapeptide MXKDX repeat protein YP_007589535.1 PFAM: 2-nitropropane dioxygenase YP_007589536.1 PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein YP_007589537.1 PFAM: Predicted SPOUT methyltransferase; TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH YP_007589538.1 PFAM: Acetyltransferase (GNAT) family YP_007589539.1 PFAM: Maf-like protein; TIGRFAM: MAF protein YP_007589540.1 PFAM: CAAX amino terminal protease family YP_007589541.1 PFAM: MAPEG family YP_007589542.1 PFAM: Putative neutral zinc metallopeptidase YP_007589543.1 PFAM: Uncharacterised protein family (UPF0153) YP_007589545.1 PFAM: Sulfotransferase domain YP_007589546.1 PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase YP_007589547.1 PFAM: Putative esterase; TIGRFAM: S-formylglutathione hydrolase YP_007589548.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_007589549.1 PFAM: Methyltransferase domain YP_007589550.1 PFAM: Major Facilitator Superfamily YP_007589551.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase YP_007589552.1 PFAM: NlpC/P60 family YP_007589553.1 PFAM: BlaR1 peptidase M56; Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_007589554.1 PFAM: Penicillinase repressor YP_007589557.1 PFAM: N-formylglutamate amidohydrolase; TIGRFAM: N-formylglutamate amidohydrolase YP_007589558.1 PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative YP_007589559.1 PFAM: Carbonic anhydrase YP_007589560.1 PFAM: Aldehyde dehydrogenase family YP_007589561.1 PFAM: short chain dehydrogenase YP_007589563.1 PFAM: Maltose operon periplasmic protein precursor (MalM) YP_007589564.1 PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase YP_007589565.1 PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein YP_007589566.1 PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6 YP_007589567.1 PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18 YP_007589568.1 PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9 YP_007589569.1 PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: phage replicative helicase, DnaB family, HK022 subfamily; replicative DNA helicase YP_007589570.1 PFAM: KaiC; TIGRFAM: DNA repair protein RadA YP_007589571.1 PFAM: Cytochrome C assembly protein YP_007589572.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein YP_007589573.1 PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16 YP_007589574.1 PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM YP_007589575.1 PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase YP_007589576.1 PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type YP_007589577.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_007589578.1 PFAM: Radical SAM superfamily; TIGRFAM: KamA family protein; lysine-2,3-aminomutase-related protein YP_007589579.1 PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P YP_007589580.1 PFAM: Amidohydrolase family YP_007589581.1 PFAM: YCII-related domain YP_007589582.1 PFAM: Methyltransferase domain; TIGRFAM: ubiquinone biosynthesis O-methyltransferase YP_007589583.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-phosphoglycolate phosphatase, prokaryotic YP_007589585.1 PFAM: Uncharacterized ACR, COG1469 YP_007589586.1 PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD YP_007589587.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA YP_007589588.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor YP_007589589.1 PFAM: Fe-S metabolism associated domain YP_007589590.1 PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase YP_007589591.1 PFAM: Rickettsia 17 kDa surface antigen YP_007589592.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase YP_007589593.1 PFAM: Putative FMN-binding domain YP_007589594.1 PFAM: OsmC-like protein YP_007589595.1 PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase YP_007589596.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain YP_007589597.1 PFAM: Amino acid kinase family; Protein of unknown function (DUF619); TIGRFAM: acetylglutamate kinase YP_007589598.1 PFAM: Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form YP_007589599.1 PFAM: Lyase; TIGRFAM: argininosuccinate lyase YP_007589600.1 PFAM: PUA domain; Amino acid kinase family; TIGRFAM: glutamate 5-kinase YP_007589601.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase YP_007589602.1 PFAM: ABC transporter YP_007589603.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_007589604.1 PFAM: Predicted permease YP_007589605.1 PFAM: Aminotransferase class-V; TIGRFAM: kynureninase YP_007589607.1 PFAM: Amidohydrolase YP_007589608.1 PFAM: Fusaric acid resistance protein family YP_007589609.1 PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: elongation factor P-like protein YeiP; translation elongation factor P YP_007589610.1 PFAM: short chain dehydrogenase YP_007589611.1 PFAM: Domain of unknown function (DUF3315) YP_007589612.1 PFAM: Acetyltransferase (GNAT) family YP_007589613.1 PFAM: Domain of unknown function (DU1801) YP_007589614.1 PFAM: Acetyltransferase (GNAT) family YP_007589615.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain YP_007589616.1 PFAM: NUDIX domain YP_007589617.1 PFAM: Amidohydrolase family YP_007589618.1 PFAM: HMGL-like YP_007589619.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit YP_007589620.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_007589621.1 PFAM: FeoA domain YP_007589622.1 PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB YP_007589624.1 PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20 YP_007589625.1 PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN YP_007589626.1 PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase YP_007589627.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Zinc finger found in FPG and IleRS; TIGRFAM: isoleucyl-tRNA synthetase YP_007589628.1 PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase YP_007589629.1 PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) YP_007589630.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_007589631.1 PFAM: Type II transport protein GspH; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_007589632.1 TIGRFAM: type IV pilus modification protein PilV YP_007589633.1 TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_007589636.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_007589637.1 PFAM: Putative ATPase (DUF699); Viral (Superfamily 1) RNA helicase; TIGRFAM: exodeoxyribonuclease V, alpha subunit YP_007589638.1 PFAM: UvrD/REP helicase; TIGRFAM: exodeoxyribonuclease V, beta subunit YP_007589639.1 PFAM: Exodeoxyribonuclease V, gamma subunit; TIGRFAM: exodeoxyribonuclease V, gamma subunit YP_007589640.1 PFAM: YCII-related domain YP_007589641.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007589642.1 PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_007589643.1 PFAM: Protein of unknown function (DUF1044) YP_007589645.1 PFAM: Arc-like DNA binding domain; manually curated YP_007589646.1 manually curated YP_007589648.1 PFAM: Lipid A Biosynthesis N-terminal domain YP_007589649.1 PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase YP_007589650.1 PFAM: Homocysteine S-methyltransferase YP_007589651.1 PFAM: Bacterial regulatory protein, arsR family; Methyltransferase domain YP_007589652.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_007589653.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family YP_007589654.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_007589655.1 PFAM: Bacterial NAD-glutamate dehydrogenase YP_007589656.1 PFAM: ATP-NAD kinase YP_007589657.1 PFAM: 5'-nucleotidase YP_007589658.1 PFAM: EamA-like transporter family YP_007589659.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_007589662.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain YP_007589663.1 PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain YP_007589664.1 PFAM: 7TM diverse intracellular signalling; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_007589665.1 PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd) YP_007589666.1 PFAM: Acetyltransferase (GNAT) family YP_007589667.1 PFAM: Protein of unknown function (DUF419) YP_007589668.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_007589669.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2058) YP_007589670.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_007589671.1 PFAM: Outer membrane lipoprotein Slp family; TIGRFAM: outer membrane lipoprotein, Slp family YP_007589672.1 PFAM: Protein of unknown function (DUF519) YP_007589675.1 PFAM: Multicopper oxidase; TIGRFAM: copper-resistance protein, CopA family; Tat (twin-arginine translocation) pathway signal sequence YP_007589676.1 PFAM: Copper resistance protein B precursor (CopB) YP_007589678.1 PFAM: Protein of unknown function, DUF YP_007589680.1 PFAM: Outer membrane efflux protein YP_007589681.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_007589682.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium) YP_007589685.1 PFAM: Chromate resistance exported protein YP_007589686.1 PFAM: PaaX-like protein C-terminal domain; Chromate resistance exported protein YP_007589687.1 PFAM: Domain of Unknown Function (DUF1259) YP_007589688.1 PFAM: Chromate transporter; TIGRFAM: chromate transporter, chromate ion transporter (CHR) family YP_007589689.1 PFAM: Methyltransferase domain YP_007589690.1 PFAM: EamA-like transporter family YP_007589691.1 PFAM: AsmA family YP_007589692.1 PFAM: Ribosomal RNA adenine dimethylase YP_007589693.1 PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YP_007589694.1 PFAM: Bacterial-like globin YP_007589695.1 PFAM: Protein of unknown function (DUF3034) YP_007589696.1 PFAM: Secreted repeat of unknown function YP_007589697.1 PFAM: Transcriptional regulator PadR-like family YP_007589699.1 PFAM: Methyltransferase domain YP_007589700.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; TIGRFAM: endonuclease III YP_007589701.1 PFAM: Putative Fe-S cluster; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit YP_007589703.1 PFAM: tRNA synthetases class I (M); Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase YP_007589704.1 PFAM: Major Facilitator Superfamily YP_007589705.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_007589706.1 PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain YP_007589707.1 PFAM: Transposase YP_007589708.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2147) YP_007589709.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2147) YP_007589710.1 PFAM: ParA/MinD ATPase like; Anion-transporting ATPase YP_007589711.1 PFAM: NADPH-dependent FMN reductase YP_007589712.1 PFAM: dUTPase; TIGRFAM: deoxycytidine triphosphate deaminase YP_007589714.1 PFAM: HIT domain YP_007589715.1 PFAM: Dienelactone hydrolase family YP_007589716.1 PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: ribosomal protein S12 methylthiotransferase RimO; radical SAM methylthiotransferase, MiaB/RimO family YP_007589717.1 PFAM: Protein of unknown function (DUF3025) YP_007589718.1 TIGRFAM: phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein YP_007589719.1 PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreB YP_007589721.1 PFAM: Bacterial protein of unknown function (DUF853) YP_007589722.1 PFAM: Transglycosylase SLT domain; LysM domain YP_007589724.1 PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor YP_007589725.1 PFAM: Methyltransferase small domain; TIGRFAM: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; HemK family putative methylases YP_007589726.1 PFAM: Acetyltransferase (GNAT) family YP_007589727.1 PFAM: Chorismate synthase; TIGRFAM: chorismate synthase YP_007589729.1 PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) YP_007589731.1 TIGRFAM: FimV C-terminal domain; FimV N-terminal domain YP_007589732.1 PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I YP_007589733.1 PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase YP_007589735.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit YP_007589736.1 PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit YP_007589737.1 PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit YP_007589738.1 PFAM: PAP2 superfamily YP_007589739.1 PFAM: Glycosyl transferases group 1 YP_007589742.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family YP_007589744.1 PFAM: Ferric uptake regulator family YP_007589745.1 PFAM: MerC mercury resistance protein YP_007589746.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_007589749.1 PFAM: Trp repressor protein; TIGRFAM: TrpR-related protein YerC/YecD YP_007589750.1 PFAM: HisG, C-terminal domain; ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase, C-terminal domain; ATP phosphoribosyltransferase YP_007589751.1 PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase YP_007589752.1 PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase YP_007589753.1 PFAM: Imidazoleglycerol-phosphate dehydratase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase family domain; histidinol-phosphatase YP_007589754.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_007589755.1 PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_007589756.1 PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit YP_007589757.1 PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphatase YP_007589758.1 PFAM: LytTr DNA-binding domain YP_007589759.1 PFAM: Carboxylesterase YP_007589760.1 PFAM: Peptidase C13 family YP_007589761.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase YP_007589762.1 PFAM: ARD/ARD' family YP_007589763.1 PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: methylthioribulose-1-phosphate dehydratase YP_007589764.1 PFAM: High potential iron-sulfur protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence YP_007589765.1 PFAM: Amino acid permease; TIGRFAM: amino acid transporter YP_007589766.1 PFAM: Amino acid permease YP_007589767.1 PFAM: NUDIX domain YP_007589768.1 PFAM: 3-hydroxyanthranilic acid dioxygenase; TIGRFAM: 3-hydroxyanthranilate 3,4-dioxygenase YP_007589769.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA topoisomerase IV, B subunit, proteobacterial YP_007589771.1 PFAM: ABC transporter; manually curated YP_007589772.1 PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase YP_007589773.1 PFAM: N-acetyltransferase YP_007589775.1 PFAM: Barstar (barnase inhibitor) YP_007589776.1 PFAM: ribonuclease YP_007589777.1 PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial YP_007589779.1 PFAM: RHS Repeat; TIGRFAM: YD repeat (two copies) YP_007589780.1 PFAM: RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies) YP_007589781.1 PFAM: Integrase core domain YP_007589782.1 PFAM: Protein of unknown function DUF72 YP_007589783.1 PFAM: PAP2 superfamily YP_007589784.1 PFAM: Beta-lactamase; Domain of unknown function (DUF3471) YP_007589785.1 PFAM: Putative esterase YP_007589788.1 PFAM: Mechanosensitive ion channel; Protein of unknown function (DUF3772) YP_007589789.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_007589790.1 PFAM: Domain of unknown function (DUF1905) YP_007589791.1 PFAM: NADPH-dependent FMN reductase; TIGRFAM: arsenical resistance protein ArsH YP_007589792.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_007589793.1 PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein YP_007589795.1 PFAM: Cupin domain YP_007589797.1 PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family YP_007589798.1 PFAM: MerR, DNA binding; MerR family regulatory protein; TIGRFAM: Hg(II)-responsive transcriptional regulator; Cu(I)-responsive transcriptional regulator YP_007589799.1 PFAM: YHS domain; E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_007589800.1 PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase YP_007589801.1 PFAM: Sporulation related domain YP_007589802.1 PFAM: Colicin V production protein YP_007589803.1 PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase YP_007589804.1 PFAM: Protein of unknown function (DUF455) YP_007589805.1 PFAM: Erythromycin esterase YP_007589806.1 PFAM: Phosphoribosyl transferase domain YP_007589807.1 PFAM: Alcohol dehydrogenase GroES-like domain; TIGRFAM: zinc-binding alcohol dehydrogenase family protein YP_007589808.1 PFAM: Putative phospholipid-binding domain YP_007589809.1 PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase YP_007589810.1 PFAM: Phenylalanine and histidine ammonia-lyase YP_007589812.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase) YP_007589813.1 PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family YP_007589815.1 PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, delta' subunit; DNA polymerase III, subunit gamma and tau YP_007589816.1 PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family YP_007589817.1 PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR YP_007589818.1 PFAM: HIT domain YP_007589819.1 PFAM: Outer membrane lipoprotein Slp family; TIGRFAM: outer membrane lipoprotein, Slp family YP_007589820.1 PFAM: Transglutaminase-like superfamily; Domain of unknown function (DUF3488) YP_007589821.1 PFAM: Protein of unknown function DUF58 YP_007589822.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_007589823.1 PFAM: Maf-like protein; TIGRFAM: MAF protein YP_007589825.1 PFAM: Uncharacterized ACR, COG1399; manually curated YP_007589826.1 PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32 YP_007589827.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III YP_007589828.1 PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase YP_007589829.1 PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase YP_007589830.1 PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein YP_007589831.1 PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II YP_007589832.1 PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: aminodeoxychorismate synthase, component I, clade 2 YP_007589833.1 PFAM: Aminotransferase class IV; TIGRFAM: aminodeoxychorismate lyase YP_007589834.1 PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family YP_007589835.1 PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase YP_007589836.1 TIGRFAM: DNA polymerase III, delta' subunit YP_007589837.1 PFAM: GlcNAc-PI de-N-acetylase YP_007589838.1 PFAM: EAL domain; GGDEF domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_007589839.1 PFAM: PilZ domain YP_007589840.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YP_007589841.1 PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit YP_007589842.1 PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit YP_007589843.1 PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; TIGRFAM: NADH dehydrogenase I, D subunit YP_007589844.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit YP_007589845.1 PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: NADH-quinone oxidoreductase, F subunit YP_007589846.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; TIGRFAM: NADH-quinone oxidoreductase, chain G YP_007589847.1 PFAM: NADH dehydrogenase YP_007589848.1 TIGRFAM: NADH-quinone oxidoreductase, chain I YP_007589849.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_007589850.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YP_007589851.1 PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L YP_007589852.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M YP_007589853.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N YP_007589854.1 PFAM: Uncharacterised BCR, YhbC family COG0779 YP_007589855.1 PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA; transcription termination factor NusA, C-terminal duplication YP_007589856.1 PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; Bacterial translation initiation factor IF-2 associated region; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2 YP_007589857.1 PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A YP_007589858.1 PFAM: TruB family pseudouridylate synthase (N terminal domain); tRNA Pseudouridine synthase II, C terminal; TIGRFAM: tRNA pseudouridine 55 synthase YP_007589859.1 PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle YP_007589860.1 PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; Polyribonucleotide nucleotidyltransferase, RNA binding domain; 3' exoribonuclease family, domain 2; TIGRFAM: polyribonucleotide nucleotidyltransferase YP_007589861.1 PFAM: Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E); TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit YP_007589862.1 PFAM: Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus; alpha/beta hydrolase fold; TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit YP_007589863.1 PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase YP_007589864.1 PFAM: DNA gyrase C-terminal domain, beta-propeller; DNA gyrase/topoisomerase IV, subunit A; TIGRFAM: DNA gyrase, A subunit YP_007589867.1 PFAM: Redoxin YP_007589868.1 PFAM: Hsp20/alpha crystallin family YP_007589869.1 PFAM: DnaJ C terminal region; DnaJ domain YP_007589870.1 PFAM: Response regulator receiver domain YP_007589871.1 PFAM: Zinc-binding dehydrogenase; TIGRFAM: putative quinone oxidoreductase, YhdH/YhfP family YP_007589872.1 PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00730 family protein YP_007589873.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase YP_007589874.1 PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) YP_007589875.1 PFAM: Dehydrogenase E1 component; Transketolase, pyrimidine binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component YP_007589876.1 PFAM: Acetyltransferase (GNAT) family YP_007589877.1 PFAM: Cupin superfamily protein YP_007589878.1 PFAM: Sulfite exporter TauE/SafE YP_007589879.1 PFAM: Flavodoxin; FAD binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha-component YP_007589880.1 PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: sulfite reductase (NADPH) hemoprotein, beta-component YP_007589881.1 PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: phosophoadenylyl-sulfate reductase (thioredoxin); phosphoadenosine phosphosulfate reductase, thioredoxin dependent YP_007589882.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_007589883.1 PFAM: Sirohaem synthase dimerisation region; Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase, N-terminal domain; uroporphyrinogen-III C-methyltransferase YP_007589884.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases YP_007589885.1 PFAM: HxlR-like helix-turn-helix YP_007589886.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain YP_007589887.1 PFAM: Lyase; Adenylosuccinate lyase C-terminal; TIGRFAM: adenylosuccinate lyase YP_007589888.1 PFAM: Lyase; Fumarase C C-terminus; TIGRFAM: fumarate hydratase, class II YP_007589891.1 PFAM: ABC transporter YP_007589892.1 PFAM: Bacterial regulatory proteins, gntR family YP_007589894.1 PFAM: Amidohydrolase family YP_007589895.1 PFAM: Flavodoxin-like fold YP_007589896.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_007589897.1 PFAM: Aminotransferase class I and II YP_007589898.1 PFAM: Carbon-nitrogen hydrolase YP_007589899.1 PFAM: ArsC family; TIGRFAM: arsenate reductase (glutaredoxin) YP_007589900.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase YP_007589901.1 PFAM: Putative transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B YP_007589902.1 PFAM: ScpA/B protein YP_007589903.1 PFAM: PilZ domain YP_007589904.1 PFAM: AMP-binding enzyme YP_007589906.1 PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase 1 YP_007589907.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain YP_007589908.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain YP_007589909.1 PFAM: Citrate transporter YP_007589910.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_007589911.1 PFAM: Esterase PHB depolymerase YP_007589912.1 PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007589913.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_007589914.1 PFAM: 3HB-oligomer hydrolase (3HBOH) YP_007589915.1 PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YP_007589916.1 PFAM: Bacterial protein of unknown function (DUF937) YP_007589917.1 PFAM: Transglycosylase associated protein YP_007589918.1 PFAM: Aminotransferase class I and II YP_007589919.1 PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: malate dehydrogenase YP_007589920.1 PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: propionate--CoA ligase; acetate--CoA ligase YP_007589921.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: alkyl hydroperoxide reductase, F subunit YP_007589922.1 PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; TIGRFAM: peroxiredoxin YP_007589923.1 PFAM: Sodium:dicarboxylate symporter family YP_007589924.1 PFAM: Isocitrate lyase family; TIGRFAM: methylisocitrate lyase YP_007589925.1 PFAM: Citrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II YP_007589926.1 PFAM: Integral membrane protein TerC family; TIGRFAM: integral membrane protein, YjbE family YP_007589927.1 PFAM: MmgE/PrpD family; TIGRFAM: 2-methylcitrate dehydratase YP_007589928.1 PFAM: OmpA family YP_007589929.1 PFAM: Transposase DDE domain YP_007589930.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; manually curated YP_007589931.1 PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; 2-amino-3-ketobutyrate coenzyme A ligase YP_007589932.1 PFAM: Domain of Unknown Function (DUF748) YP_007589933.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: L-threonine 3-dehydrogenase; 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase YP_007589934.1 PFAM: Peptidase S46 YP_007589935.1 PFAM: Peptidase S46 YP_007589936.1 PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase YP_007589937.1 PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq YP_007589938.1 PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX YP_007589939.1 PFAM: Bacterial membrane protein N terminal; SPFH domain / Band 7 family; TIGRFAM: HflK protein YP_007589940.1 PFAM: SPFH domain / Band 7 family; TIGRFAM: HflC protein YP_007589941.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2065) YP_007589942.1 PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase YP_007589943.1 PFAM: Transposase IS200 like YP_007589944.1 PFAM: MarR family; AsnC family YP_007589945.1 PFAM: FAD dependent oxidoreductase YP_007589946.1 PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase YP_007589948.1 PFAM: Restriction endonuclease; manually curated YP_007589949.1 PFAM: N-6 DNA Methylase; HsdM N-terminal domain YP_007589950.1 PFAM: Type I restriction modification DNA specificity domain YP_007589952.1 PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit YP_007589955.1 PFAM: Subtilase family YP_007589956.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007589959.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_007589960.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_007589962.1 PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_007589964.1 PFAM: Glycine cleavage system P-protein; TIGRFAM: glycine dehydrogenase (decarboxylating) YP_007589967.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_007589968.1 PFAM: Ribonuclease B OB domain; RNB domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases YP_007589969.1 PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3 YP_007589971.1 PFAM: Small Multidrug Resistance protein YP_007589972.1 PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU YP_007589973.1 PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein YP_007589974.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA YP_007589975.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC YP_007589976.1 TIGRFAM: phosphate ABC transporter, phosphate-binding protein YP_007589977.1 PFAM: Exonuclease; TIGRFAM: ribonuclease T YP_007589979.1 PFAM: Protein of unknown function (DUF489) YP_007589980.1 PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase YP_007589981.1 PFAM: NUDIX domain YP_007589982.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS YP_007589983.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA YP_007589984.1 PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1 YP_007589985.1 PFAM: Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn); TIGRFAM: putative polyhydroxyalkanoic acid system protein YP_007589986.1 PFAM: FHA domain YP_007589987.1 PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase YP_007589988.1 PFAM: Prephenate dehydratase; ACT domain; Chorismate mutase type II; TIGRFAM: chorismate mutase domain of proteobacterial P-protein, clade 2 YP_007589989.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase YP_007589990.1 PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_007589991.1 PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit YP_007589992.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_007589993.1 PFAM: Bacterial DNA-binding protein YP_007589995.1 PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family YP_007589996.1 PFAM: Caudovirus prohead protease; TIGRFAM: phage prohead protease, HK97 family YP_007590003.1 PFAM: Phage integrase family YP_007590004.1 PFAM: TraB family; TIGRFAM: pheromone shutdown-related protein TraB YP_007590005.1 PFAM: Carbon-nitrogen hydrolase YP_007590006.1 PFAM: Porphyromonas-type peptidyl-arginine deiminase YP_007590008.1 PFAM: ABC transporter YP_007590010.1 PFAM: DHH family; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ YP_007590011.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_007590015.1 PFAM: DHHA1 domain; DHH family; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ YP_007590018.1 PFAM: SseB protein YP_007590019.1 PFAM: Dual specificity phosphatase, catalytic domain; manually curated YP_007590020.1 PFAM: Uncharacterised ACR, COG2135 YP_007590021.1 PFAM: DnaJ domain YP_007590023.1 PFAM: Peptidase S24-like YP_007590024.1 PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family YP_007590027.1 manually curated YP_007590032.1 PFAM: Protein of unknown function (DUF3478) YP_007590033.1 PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing) YP_007590034.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2 YP_007590036.1 PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial YP_007590038.1 PFAM: YCII-related domain YP_007590039.1 PFAM: BolA-like protein YP_007590040.1 PFAM: RecF/RecN/SMC N terminal domain; SMC proteins Flexible Hinge Domain; TIGRFAM: chromosome segregation protein SMC, common bacterial type YP_007590041.1 PFAM: ZipA, C-terminal FtsZ-binding domain; TIGRFAM: cell division protein ZipA YP_007590042.1 PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase YP_007590043.1 PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase YP_007590044.1 PFAM: LexA DNA binding domain; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA YP_007590046.1 PFAM: impB/mucB/samB family YP_007590047.1 PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; TIGRFAM: DNA-directed DNA polymerase III (polc) YP_007590048.1 PFAM: Transposase YP_007590049.1 PFAM: Helix-turn-helix YP_007590051.1 manually curated YP_007590052.1 PFAM: SseB protein; manually curated YP_007590053.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_007590054.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family YP_007590055.1 PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase AhpD family core domain YP_007590057.1 PFAM: S-adenosylmethionine decarboxylase; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form YP_007590058.1 PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II YP_007590059.1 PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; cytochrome oxidase maturation protein, cbb3-type YP_007590060.1 PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II YP_007590061.1 PFAM: Cytochrome c YP_007590062.1 PFAM: SCO1/SenC YP_007590063.1 manually curated YP_007590064.1 PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB) YP_007590065.1 PFAM: Bacterial Cytochrome Ubiquinol Oxidase YP_007590066.1 PFAM: Carbon-nitrogen hydrolase YP_007590067.1 PFAM: DSBA-like thioredoxin domain YP_007590068.1 PFAM: NmrA-like family YP_007590069.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_007590070.1 TIGRFAM: integrative and conjugative element protein, VC0181 family; manually curated YP_007590071.1 PFAM: ThiF family; manually curated YP_007590072.1 PFAM: Peptidase propeptide and YPEB domain YP_007590073.1 PFAM: Plasmid replication region DNA-binding N-term; manually curated YP_007590074.1 PFAM: Phage integrase family YP_007590077.1 PFAM: Multicopper oxidase; TIGRFAM: copper-resistance protein, CopA family; Tat (twin-arginine translocation) pathway signal sequence YP_007590078.1 PFAM: Copper resistance protein B precursor (CopB) YP_007590080.1 PFAM: Protein of unknown function, DUF YP_007590081.1 PFAM: Multicopper oxidase YP_007590082.1 PFAM: YHS domain; E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase YP_007590084.1 PFAM: Outer membrane efflux protein YP_007590085.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_007590086.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium) YP_007590087.1 PFAM: Copper binding periplasmic protein CusF YP_007590088.1 PFAM: Domain of unknown function (DUF305) YP_007590089.1 PFAM: NAD dependent epimerase/dehydratase family; Vitamin K epoxide reductase family YP_007590090.1 PFAM: MerR, DNA binding; MerR family regulatory protein; TIGRFAM: Hg(II)-responsive transcriptional regulator YP_007590091.1 PFAM: MerT mercuric transport protein; manually curated YP_007590092.1 PFAM: Heavy-metal-associated domain YP_007590095.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_007590096.1 PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein YP_007590097.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_007590098.1 PFAM: NADPH-dependent FMN reductase; TIGRFAM: arsenical resistance protein ArsH YP_007590099.1 PFAM: ArsC family; TIGRFAM: arsenate reductase (glutaredoxin) YP_007590100.1 PFAM: Outer membrane efflux protein YP_007590101.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_007590102.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium) YP_007590103.1 PFAM: Nitrogen regulatory protein P-II YP_007590104.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_007590105.1 PFAM: PAP2 superfamily; manually curated YP_007590106.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_007590107.1 PFAM: Cytochrome c; Iron permease FTR1 family; TIGRFAM: FTR1 family protein YP_007590108.1 PFAM: MerR, DNA binding; MerR family regulatory protein; TIGRFAM: Cu(I)-responsive transcriptional regulator YP_007590109.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; copper ion binding protein; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_007590110.1 PFAM: Heavy-metal-associated domain; manually curated YP_007590111.1 PFAM: VIT family YP_007590112.1 PFAM: Major Facilitator Superfamily YP_007590113.1 PFAM: Outer membrane efflux protein YP_007590114.1 PFAM: Protein of unknown function (DUF3240) YP_007590115.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium) YP_007590116.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_007590118.1 PFAM: Uncharacterised BCR, COG1937 YP_007590119.1 PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase YP_007590120.1 PFAM: Protein of unknown function (DUF1289); manually curated YP_007590122.1 PFAM: Transposase YP_007590124.1 PFAM: Patatin-like phospholipase YP_007590125.1 PFAM: Phage integrase family YP_007590126.1 PFAM: Plasmid replication region DNA-binding N-term YP_007590130.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_007590131.1 PFAM: GMP synthase C terminal domain; Glutamine amidotransferase class-I; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit YP_007590132.1 PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase YP_007590133.1 PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_007590134.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain YP_007590135.1 PFAM: PQQ enzyme repeat; TIGRFAM: outer membrane assembly lipoprotein YfgL YP_007590136.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2133) YP_007590138.1 PFAM: Tetratricopeptide repeat; TIGRFAM: type IV pilus biogenesis/stability protein PilW YP_007590139.1 PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase YP_007590140.1 PFAM: Nucleoside diphosphate kinase YP_007590141.1 PFAM: Bacterial regulatory proteins, tetR family YP_007590142.1 PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_007590143.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_007590146.1 PFAM: AhpC/TSA family YP_007590147.1 PFAM: Fic/DOC family YP_007590148.1 PFAM: Excalibur calcium-binding domain; 'Cold-shock' DNA-binding domain YP_007590155.1 PFAM: short chain dehydrogenase YP_007590156.1 PFAM: Pirin YP_007590157.1 PFAM: Metal binding domain of Ada; 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase YP_007590158.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2086) YP_007590159.1 TIGRFAM: DNA alkylation damage repair protein AlkB YP_007590160.1 PFAM: HhH-GPD superfamily base excision DNA repair protein YP_007590161.1 PFAM: Predicted membrane protein (DUF2231) YP_007590163.1 PFAM: Metallo-beta-lactamase superfamily YP_007590164.1 PFAM: Metallo-beta-lactamase superfamily YP_007590165.1 PFAM: Putative tRNA binding domain; TIGRFAM: export-related chaperone CsaA YP_007590166.1 PFAM: FAD dependent oxidoreductase YP_007590167.1 PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase YP_007590168.1 PFAM: Polysaccharide biosynthesis protein YP_007590169.1 PFAM: Glycosyl transferase family 4 YP_007590172.1 PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, beta subunit YP_007590173.1 PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1 YP_007590174.1 PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase YP_007590175.1 PFAM: Acyl CoA binding protein YP_007590176.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase / NADH oxidase family YP_007590177.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_007590178.1 PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; manually curated YP_007590179.1 PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA YP_007590180.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit YP_007590181.1 PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit YP_007590183.1 PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase YP_007590184.1 PFAM: DnaJ central domain (4 repeats); DnaJ C terminal region; DnaJ domain; TIGRFAM: chaperone protein DnaJ YP_007590185.1 PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK YP_007590186.1 PFAM: GrpE YP_007590187.1 PFAM: HrcA protein C terminal domain; TIGRFAM: heat shock gene repressor HrcA YP_007590188.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN YP_007590189.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_007590190.1 PFAM: Histidine kinase; MASE1 YP_007590191.1 PFAM: Ferric uptake regulator family YP_007590192.1 PFAM: SmpA / OmlA family YP_007590193.1 PFAM: Uncharacterised protein family (UPF0125); manually curated YP_007590194.1 PFAM: Polyketide cyclase / dehydrase and lipid transport YP_007590195.1 PFAM: SmpB protein; TIGRFAM: SsrA-binding protein YP_007590196.1 PFAM: Cytochrome c YP_007590197.1 PFAM: Cytochrome c YP_007590198.1 PFAM: Iron-sulphur cluster biosynthesis; NifU-like domain; TIGRFAM: IscR-regulated protein YhgI YP_007590199.1 PFAM: Pterin 4 alpha carbinolamine dehydratase YP_007590200.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family YP_007590201.1 PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family YP_007590202.1 PFAM: Plasmid replication region DNA-binding N-term YP_007590204.1 PFAM: Plasmid replication region DNA-binding N-term YP_007590205.1 PFAM: Phage integrase family YP_007590206.1 PFAM: Patatin-like phospholipase YP_007590207.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YP_007590208.1 PFAM: Bacterial-like globin YP_007590209.1 PFAM: MerE protein YP_007590210.1 PFAM: MerR family regulatory protein; TIGRFAM: mercuric resistence transcriptional repressor protein MerD YP_007590211.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Heavy-metal-associated domain; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: mercuric reductase YP_007590213.1 PFAM: MerC mercury resistance protein YP_007590214.1 PFAM: Heavy-metal-associated domain; TIGRFAM: mercuric transport protein periplasmic component YP_007590215.1 PFAM: MerT mercuric transport protein YP_007590216.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2063) YP_007590217.1 PFAM: Protein of unknown function (DUF692) YP_007590218.1 PFAM: Predicted integral membrane protein (DUF2282) YP_007590219.1 PFAM: BFD-like [2Fe-2S] binding domain YP_007590221.1 PFAM: MerR, DNA binding; MerR family regulatory protein; TIGRFAM: Hg(II)-responsive transcriptional regulator YP_007590223.1 PFAM: Transposase YP_007590225.1 PFAM: SprT-like family YP_007590226.1 PFAM: Uncharacterised ACR, COG2135 YP_007590228.1 PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc) YP_007590231.1 PFAM: impB/mucB/samB family YP_007590233.1 PFAM: Peptidase S24-like YP_007590234.1 PFAM: Uncharacterised ACR, COG2135 YP_007590237.1 PFAM: SprT-like family YP_007590242.1 PFAM: Zinc-binding domain of primase-helicase YP_007590243.1 PFAM: von Willebrand factor type A domain; Cobalamin biosynthesis protein CobT VWA domain; Cobalamin biosynthesis protein CobT YP_007590244.1 PFAM: Protein of unknown function (DUF3150) YP_007590246.1 PFAM: AAA domain (dynein-related subfamily); CbbQ/NirQ/NorQ C-terminal YP_007590254.1 PFAM: Disulfide bond isomerase protein N-terminus YP_007590261.1 PFAM: Ribonucleotide reductase, barrel domain; manually curated YP_007590262.1 PFAM: Ribonucleotide reductase, all-alpha domain; Ribonucleotide reductase, barrel domain YP_007590264.1 manually curated YP_007590269.1 PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type YP_007590270.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_007590273.1 manually curated YP_007590274.1 PFAM: DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ YP_007590275.1 PFAM: SNF2 family N-terminal domain YP_007590277.1 PFAM: ParB-like nuclease domain; TIGRFAM: PRTRC system ParB family protein; ParB-like partition proteins YP_007590282.1 TIGRFAM: PRTRC system protein B YP_007590283.1 PFAM: Domain of unknown function (DUF2016); TIGRFAM: PRTRC system protein A YP_007590284.1 PFAM: ThiF family; TIGRFAM: PRTRC system ThiF family protein YP_007590285.1 PFAM: Protein of unknown function (DUF3085) YP_007590288.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb) YP_007590290.1 PFAM: UvrD/REP helicase YP_007590291.1 PFAM: Putative exonuclease, RdgC YP_007590294.1 PFAM: VRR-NUC domain YP_007590298.1 PFAM: Protein of unknown function (DUF1643); manually curated YP_007590300.1 PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA) YP_007590303.1 PFAM: S1/P1 Nuclease YP_007590307.1 PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins YP_007590308.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_007590316.1 PFAM: DNA methylase YP_007590320.1 PFAM: Protein of unknown function DUF262 YP_007590330.1 PFAM: DEAD_2 YP_007590332.1 TIGRFAM: PRTRC system protein D YP_007590334.1 PFAM: Transglycosylase SLT domain; manually curated YP_007590337.1 TIGRFAM: TraF-like protein YP_007590338.1 PFAM: Conjugative relaxosome accessory transposon protein YP_007590339.1 PFAM: TraG-like protein, N-terminal region YP_007590341.1 PFAM: TraL protein; TIGRFAM: type IV conjugative transfer system protein TraL YP_007590342.1 PFAM: TraE protein; TIGRFAM: type IV conjugative transfer system protein TraE YP_007590343.1 PFAM: TraK protein YP_007590344.1 PFAM: Bacterial conjugation TrbI-like protein YP_007590345.1 PFAM: Type IV conjugative transfer system lipoprotein (TraV); TIGRFAM: type IV conjugative transfer system lipoprotein TraV YP_007590346.1 PFAM: TrbC/VIRB2 family YP_007590347.1 PFAM: F pilus assembly Type-IV secretion system for plasmid transfer; TIGRFAM: type-IV secretion system protein TraC YP_007590349.1 PFAM: Peptidase S26 YP_007590350.1 PFAM: Type-F conjugative transfer system pilin assembly protein YP_007590351.1 PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA) YP_007590352.1 PFAM: TraU protein YP_007590355.1 PFAM: Putative helicase YP_007590356.1 TIGRFAM: conjugative coupling factor TraD, SXT/TOL subfamily YP_007590359.1 PFAM: UvrD/REP helicase YP_007590361.1 PFAM: Single-strand binding protein family YP_007590366.1 PFAM: Toxin co-regulated pilus biosynthesis protein Q YP_007590367.1 PFAM: Secretin N-terminal domain; Bacterial type II and III secretion system protein; TIGRFAM: type IVB pilus formation outer membrane protein, R64 PilN family YP_007590368.1 PFAM: Type IV pilus biogenesis; TIGRFAM: type IV pilus biogenesis protein PilP YP_007590369.1 PFAM: Pilin accessory protein (PilO) YP_007590370.1 PFAM: Type IV pilus biogenesis; TIGRFAM: type IV pilus biogenesis protein PilP YP_007590371.1 PFAM: Type II/IV secretion system protein YP_007590372.1 PFAM: Bacterial type II secretion system protein F domain YP_007590373.1 PFAM: PilS N terminal; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_007590374.1 PFAM: Bacterial shufflon protein, N-terminal constant region; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_007590375.1 PFAM: Transglycosylase SLT domain YP_007590376.1 PFAM: Autotransporter beta-domain; Subtilase family; TIGRFAM: autotransporter-associated beta strand repeat YP_007590377.1 PFAM: PilM YP_007590383.1 PFAM: RES domain YP_007590385.1 PFAM: Phage integrase family YP_007590391.1 PFAM: Plasmid replication region DNA-binding N-term YP_007590393.1 PFAM: Transposase YP_007590394.1 PFAM: Glycosyl transferase family 2 YP_007590395.1 PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase YP_007590396.1 PFAM: Outer membrane efflux protein YP_007590398.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium) YP_007590399.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007590400.1 PFAM: HAMP domain; His Kinase A (phosphoacceptor) domain YP_007590401.1 PFAM: Major Facilitator Superfamily YP_007590402.1 PFAM: GtrA-like protein YP_007590403.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase) YP_007590405.1 manually curated YP_007590406.1 PFAM: Transposase YP_007590407.1 PFAM: Phage integrase family; manually curated YP_007590408.1 PFAM: EAL domain; manually curated YP_007590409.1 PFAM: Patatin-like phospholipase YP_007590410.1 PFAM: Lipid A 3-O-deacylase (PagL) YP_007590411.1 PFAM: Universal stress protein family YP_007590412.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_007590415.1 PFAM: ABC transporter YP_007590416.1 PFAM: HlyD family secretion protein; manually curated; non-canonical start codon YP_007590417.1 PFAM: Protein of unknown function (DUF1656) YP_007590418.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_007590419.1 PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family YP_007590420.1 PFAM: Transposase YP_007590422.1 PFAM: MerR, DNA binding; MerR family regulatory protein; TIGRFAM: Hg(II)-responsive transcriptional regulator YP_007590424.1 PFAM: BFD-like [2Fe-2S] binding domain YP_007590425.1 PFAM: Predicted integral membrane protein (DUF2282) YP_007590426.1 PFAM: Protein of unknown function (DUF692) YP_007590427.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2063) YP_007590428.1 PFAM: MerT mercuric transport protein YP_007590429.1 PFAM: Heavy-metal-associated domain; TIGRFAM: mercuric transport protein periplasmic component YP_007590430.1 PFAM: MerC mercury resistance protein YP_007590432.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Heavy-metal-associated domain; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: mercuric reductase YP_007590433.1 PFAM: MerR family regulatory protein; TIGRFAM: mercuric resistence transcriptional repressor protein MerD YP_007590434.1 PFAM: MerE protein YP_007590435.1 PFAM: Bacterial-like globin YP_007590436.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YP_007590437.1 PFAM: Patatin-like phospholipase YP_007590438.1 PFAM: Phage integrase family YP_007590439.1 PFAM: Plasmid replication region DNA-binding N-term YP_007590440.1 PFAM: Plasmid replication region DNA-binding N-term YP_007590442.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_007590443.1 PFAM: Plasmid replication region DNA-binding N-term YP_007590446.1 PFAM: Plasmid replication region DNA-binding N-term YP_007590447.1 PFAM: Phage integrase family YP_007590448.1 PFAM: Patatin-like phospholipase YP_007590449.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YP_007590450.1 PFAM: Bacterial-like globin YP_007590451.1 PFAM: MerE protein YP_007590452.1 PFAM: MerR family regulatory protein; TIGRFAM: mercuric resistence transcriptional repressor protein MerD YP_007590453.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Heavy-metal-associated domain; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: mercuric reductase YP_007590455.1 PFAM: MerC mercury resistance protein YP_007590456.1 PFAM: Heavy-metal-associated domain; TIGRFAM: mercuric transport protein periplasmic component YP_007590457.1 PFAM: MerT mercuric transport protein YP_007590458.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2063) YP_007590459.1 PFAM: Protein of unknown function (DUF692) YP_007590460.1 PFAM: Predicted integral membrane protein (DUF2282) YP_007590461.1 PFAM: BFD-like [2Fe-2S] binding domain YP_007590463.1 PFAM: MerR family regulatory protein; MerR, DNA binding; TIGRFAM: Hg(II)-responsive transcriptional regulator YP_007590465.1 PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family YP_007590466.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_007590467.1 PFAM: Protein of unknown function (DUF1656) YP_007590468.1 PFAM: ABC transporter YP_007590471.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_007590472.1 PFAM: Universal stress protein family YP_007590473.1 PFAM: Lipid A 3-O-deacylase (PagL) YP_007590474.1 PFAM: Patatin-like phospholipase YP_007590475.1 PFAM: EAL domain; manually curated YP_007590476.1 PFAM: Phage integrase family; manually curated YP_007590477.1 PFAM: Transposase YP_007590478.1 PFAM: Response regulator receiver domain YP_007590480.1 PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit YP_007590481.1 PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase YP_007590482.1 PFAM: short chain dehydrogenase YP_007590484.1 PFAM: 2OG-Fe(II) oxygenase superfamily YP_007590485.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase YP_007590486.1 PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase YP_007590487.1 PFAM: Exonuclease YP_007590488.1 PFAM: Exonuclease; Exonuclease C-terminal YP_007590489.1 PFAM: Conserved hypothetical protein (DUF2461); TIGRFAM: TIGR02453 family protein YP_007590490.1 PFAM: Sugar (and other) transporter YP_007590491.1 PFAM: Major intrinsic protein; TIGRFAM: MIP family channel proteins YP_007590492.1 PFAM: tRNA synthetases class II (D, K and N); TIGRFAM: EF-P lysine aminoacylase GenX YP_007590493.1 PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; BRCA1 C Terminus (BRCT) domain; NAD-dependent DNA ligase C4 zinc finger domain; TIGRFAM: DNA ligase, NAD-dependent YP_007590494.1 PFAM: Transcription elongation factor, GreA/GreB, C-term YP_007590495.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_007590496.1 PFAM: Sodium/hydrogen exchanger family YP_007590497.1 PFAM: MaoC like domain; Phosphate acetyl/butaryl transferase YP_007590498.1 PFAM: Acetokinase family; TIGRFAM: acetate kinase YP_007590499.1 PFAM: XFP N-terminal domain; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; XFP C-terminal domain YP_007590500.1 PFAM: Natural resistance-associated macrophage protein YP_007590501.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase YP_007590502.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_007590503.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase YP_007590504.1 PFAM: NAD dependent epimerase/dehydratase family YP_007590505.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_007590506.1 PFAM: Universal stress protein family YP_007590508.1 manually curated YP_007590510.1 PFAM: YcfA-like protein; manually curated YP_007590512.1 PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase YP_007590514.1 PFAM: Y_Y_Y domain; Two component regulator propeller; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_007590516.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains YP_007590519.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains YP_007590520.1 PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Respiratory-chain NADH dehydrogenase, 49 Kd subunit YP_007590521.1 PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit YP_007590523.1 PFAM: Outer membrane lipoprotein carrier protein LolA; TIGRFAM: periplasmic chaperone LolA YP_007590524.1 PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; Cupin superfamily protein YP_007590525.1 PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase YP_007590526.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase YP_007590527.1 PFAM: Protein of unknown function, DUF482 YP_007590528.1 PFAM: Leucyl/phenylalanyl-tRNA protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA--protein transferase YP_007590529.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG YP_007590530.1 PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_007590531.1 PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I YP_007590532.1 PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II YP_007590533.1 PFAM: Cbb3-type cytochrome oxidase component FixQ YP_007590534.1 PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III YP_007590536.1 PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_007590537.1 PFAM: Cytochrome oxidase maturation protein cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type YP_007590540.1 PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit YP_007590541.1 PFAM: Aldehyde dehydrogenase family YP_007590542.1 PFAM: DUF218 domain YP_007590544.1 PFAM: Glycosyl hydrolases family 18; Polysaccharide deacetylase; Glycosyl transferase family 2 YP_007590545.1 PFAM: Eco57I restriction endonuclease YP_007590546.1 PFAM: EamA-like transporter family; manually curated YP_007590548.1 PFAM: Protein of unknown function (DUF1456) YP_007590550.1 PFAM: Uncharacterized protein family UPF0029; Domain of unknown function (DUF1949); TIGRFAM: uncharacterized protein, YigZ family YP_007590551.1 PFAM: ABC transporter; ABC transporter transmembrane region; TIGRFAM: ABC transporter, permease/ATP-binding protein YP_007590552.1 PFAM: Beta-lactamase YP_007590554.1 PFAM: Prolyl oligopeptidase family YP_007590555.1 PFAM: DJ-1/PfpI family YP_007590556.1 PFAM: Isochorismatase family YP_007590557.1 PFAM: Acetyltransferase (GNAT) family YP_007590558.1 TIGRFAM: probable addiction module antidote protein YP_007590560.1 PFAM: Endoribonuclease L-PSP YP_007590561.1 manually curated YP_007590564.1 PFAM: Trans-2-enoyl-CoA reductase catalytic region; NAD(P)H binding domain of trans-2-enoyl-CoA reductase; Enoyl reductase FAD binding domain YP_007590565.1 PFAM: CutC family YP_007590566.1 PFAM: Asparaginase YP_007590567.1 PFAM: 'Cold-shock' DNA-binding domain YP_007590568.1 PFAM: Phosphorylase superfamily; TIGRFAM: 5'-deoxy-5'-methylthioadenosine phosphorylase YP_007590569.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase YP_007590570.1 PFAM: Glycosyl hydrolase family 3 N terminal domain YP_007590571.1 PFAM: CYTH domain YP_007590572.1 PFAM: tRNA (Uracil-5-)-methyltransferase; TRAM domain; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA YP_007590573.1 PFAM: Protein of unknown function (DUF1318) YP_007590575.1 PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO YP_007590576.1 PFAM: KH domain; GTPase of unknown function; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain YP_007590577.1 PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial YP_007590579.1 PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type YP_007590580.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; GTP-binding protein LepA C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain YP_007590581.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family YP_007590582.1 PFAM: Anti sigma-E protein RseA, N-terminal domain YP_007590583.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoE YP_007590584.1 PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_007590586.1 PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_007590587.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2058) YP_007590588.1 PFAM: SlyX YP_007590589.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase YP_007590590.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase YP_007590591.1 PFAM: Sodium/hydrogen exchanger family YP_007590592.1 PFAM: Protein of unknown function (DUF1249) YP_007590593.1 PFAM: Domain of unknown function (DUF299) YP_007590594.1 PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: phosphoenolpyruvate synthase YP_007590595.1 PFAM: Stage II sporulation protein E (SpoIIE) YP_007590596.1 PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III, epsilon subunit, Proteobacterial YP_007590597.1 PFAM: RNase H YP_007590598.1 PFAM: Methyltransferase domain YP_007590599.1 PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: hydroxyacylglutathione hydrolase YP_007590600.1 PFAM: Transglycosylase SLT domain; LysM domain YP_007590601.1 PFAM: PPIC-type PPIASE domain YP_007590602.1 PFAM: Bacterial DNA-binding protein YP_007590603.1 PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La YP_007590604.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX) YP_007590605.1 PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP YP_007590606.1 PFAM: Bacterial trigger factor protein (TF) C-terminus; Bacterial trigger factor protein (TF); TIGRFAM: trigger factor YP_007590607.1 PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH YP_007590608.1 PFAM: FtsJ-like methyltransferase; TIGRFAM: cell division protein FtsJ YP_007590609.1 PFAM: CRS1 / YhbY (CRM) domain; TIGRFAM: putative RNA-binding protein, YhbY family YP_007590610.1 PFAM: Protein of unknown function (DUF498/DUF598) YP_007590611.1 PFAM: Peptidase family M23; LysM domain YP_007590613.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_007590614.1 PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE YP_007590615.1 PFAM: Smr domain YP_007590616.1 PFAM: tRNA pseudouridine synthase D (TruD); TIGRFAM: tRNA pseudouridine synthase, TruD family YP_007590617.1 PFAM: MgtE intracellular N domain; Divalent cation transporter; CBS domain; TIGRFAM: Mg2+ transporter (mgtE) YP_007590618.1 PFAM: YgbB family; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_007590619.1 PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_007590620.1 PFAM: Septum formation initiator YP_007590621.1 PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase YP_007590622.1 PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase YP_007590623.1 PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase YP_007590624.1 PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain YP_007590625.1 PFAM: Pyridoxal-phosphate dependent enzyme YP_007590626.1 PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain YP_007590628.1 PFAM: Radical SAM superfamily; TIGRFAM: lipoate synthase YP_007590629.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_007590631.1 PFAM: Cytochrome C and Quinol oxidase polypeptide I YP_007590632.1 PFAM: FAD binding domain; Berberine and berberine like YP_007590633.1 PFAM: Patatin-like phospholipase YP_007590634.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase YP_007590635.1 PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain; TIGRFAM: succinate CoA transferases YP_007590636.1 PFAM: Penicillin amidase YP_007590637.1 PFAM: VIT family YP_007590638.1 PFAM: NAD dependent epimerase/dehydratase family YP_007590639.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain YP_007590640.1 PFAM: Protein required for attachment to host cells YP_007590641.1 PFAM: FR47-like protein YP_007590642.1 PFAM: Amidohydrolase family YP_007590643.1 PFAM: Sir2 family YP_007590644.1 PFAM: Activator of Hsp90 ATPase homolog 1-like protein YP_007590646.1 TIGRFAM: conserved hypothetical protein YP_007590648.1 PFAM: Bacterial protein of unknown function (DUF885) YP_007590649.1 PFAM: Activator of Hsp90 ATPase homolog 1-like protein YP_007590650.1 PFAM: Protein of unknown function (DUF1428) YP_007590652.1 PFAM: HxlR-like helix-turn-helix YP_007590656.1 PFAM: Glutathione-dependent formaldehyde-activating enzyme YP_007590659.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase YP_007590660.1 PFAM: Glutathione S-transferase, N-terminal domain YP_007590661.1 PFAM: Voltage gated chloride channel; manually curated YP_007590662.1 PFAM: Acetyltransferase (GNAT) family YP_007590665.1 PFAM: Cytochrome c; Di-haem cytochrome c peroxidase YP_007590666.1 PFAM: Cytochrome b(N-terminal)/b6/petB YP_007590667.1 PFAM: RibD C-terminal domain YP_007590668.1 PFAM: YCII-related domain YP_007590669.1 PFAM: DNA/RNA tunnel of bacterial DNA dependent RNA polymerase YP_007590671.1 PFAM: Helix-turn-helix YP_007590672.1 PFAM: Integrase core domain YP_007590673.1 PFAM: Sel1 repeat; Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_007590675.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; manually curated YP_007590677.1 PFAM: Urocanase; TIGRFAM: urocanate hydratase YP_007590682.1 PFAM: Metal binding domain of Ada; AlkA N-terminal domain; HhH-GPD superfamily base excision DNA repair protein YP_007590683.1 PFAM: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase YP_007590685.1 PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase YP_007590686.1 PFAM: Major Facilitator Superfamily YP_007590689.1 PFAM: DoxX YP_007590690.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_007590691.1 PFAM: Predicted permease YP_007590692.1 PFAM: ABC transporter YP_007590693.1 PFAM: Amidohydrolase family; TIGRFAM: formiminoglutamate deiminase YP_007590694.1 PFAM: Acetyltransferase (GNAT) family; Carbon-nitrogen hydrolase YP_007590695.1 PFAM: Amidohydrolase family; TIGRFAM: imidazolonepropionase YP_007590696.1 PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase YP_007590697.1 PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: lipid A export permease/ATP-binding protein MsbA YP_007590698.1 PFAM: Biopolymer transport protein ExbD/TolR YP_007590699.1 PFAM: MotA/TolQ/ExbB proton channel family YP_007590700.1 PFAM: Competence protein; Metallo-beta-lactamase superfamily; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2 YP_007590701.1 PFAM: ABC transporter; TIGRFAM: lipoprotein releasing system, ATP-binding protein YP_007590702.1 PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family YP_007590704.1 PFAM: Protein of unknown function (DUF339) YP_007590705.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_007590706.1 PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup YP_007590707.1 PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein YP_007590708.1 PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit YP_007590709.1 PFAM: Protein of unknown function (DUF1674); manually curated YP_007590710.1 PFAM: Aminomethyltransferase folate-binding domain; TIGRFAM: folate-binding protein YgfZ YP_007590711.1 PFAM: Cell Wall Hydrolase YP_007590712.1 PFAM: Rickettsia 17 kDa surface antigen YP_007590713.1 PFAM: Rickettsia 17 kDa surface antigen YP_007590714.1 PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family YP_007590716.1 PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family YP_007590717.1 PFAM: HlyD family secretion protein; TIGRFAM: efflux pump membrane protein (multidrug resistance protein A) YP_007590718.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_007590719.1 PFAM: PHB accumulation regulatory domain; PHB/PHA accumulation regulator DNA-binding domain; TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR YP_007590720.1 PFAM: short chain dehydrogenase; TIGRFAM: acetoacetyl-CoA reductase YP_007590721.1 PFAM: FAD binding domain YP_007590722.1 PFAM: Protein of unknown function (DUF3293) YP_007590723.1 PFAM: ABC transporter; TIGRFAM: heme ABC exporter, ATP-binding protein CcmA YP_007590724.1 PFAM: CcmB protein; TIGRFAM: heme exporter protein CcmB YP_007590725.1 PFAM: Cytochrome C assembly protein; TIGRFAM: heme exporter protein CcmC YP_007590726.1 PFAM: Heme exporter protein D (CcmD); TIGRFAM: heme exporter protein CcmD YP_007590727.1 PFAM: CcmE YP_007590728.1 PFAM: Cytochrome C assembly protein; TIGRFAM: c-type cytochrome biogenesis protein CcmF YP_007590729.1 PFAM: Redoxin; TIGRFAM: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily YP_007590730.1 PFAM: Cytochrome C biogenesis protein YP_007590732.1 PFAM: alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase YP_007590733.1 PFAM: Cysteine dioxygenase type I YP_007590734.1 PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); SAP domain; EcoEI R protein C-terminal; Type III restriction enzyme, res subunit YP_007590735.1 PFAM: N-6 DNA Methylase; HsdM N-terminal domain YP_007590736.1 PFAM: Type I restriction modification DNA specificity domain YP_007590739.1 PFAM: Fic/DOC family YP_007590740.1 PFAM: Formylglycine-generating sulfatase enzyme YP_007590741.1 PFAM: 3'-5' exonuclease; HRDC domain; TIGRFAM: ribonuclease D YP_007590742.1 PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1 YP_007590743.1 PFAM: Major Facilitator Superfamily YP_007590744.1 PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase YP_007590745.1 PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase, subfamily 2 YP_007590746.1 PFAM: Methyltransferase domain YP_007590747.1 PFAM: short chain dehydrogenase YP_007590749.1 PFAM: Aldehyde dehydrogenase family YP_007590750.1 PFAM: Uncharacterized ACR, YdiU/UPF0061 family YP_007590751.1 PFAM: Transglycosylase SLT domain YP_007590753.1 PFAM: Protein of unknown function (DUF1415) YP_007590754.1 PFAM: Uncharacterised protein family (UPF0153) YP_007590755.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase YP_007590756.1 PFAM: Methyltransferase small domain YP_007590757.1 PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain YP_007590758.1 PFAM: OPT oligopeptide transporter protein; TIGRFAM: putative oligopeptide transporter, OPT family; oligopeptide transporters, OPT superfamily YP_007590759.1 PFAM: RNA pseudouridylate synthase YP_007590760.1 PFAM: YaeQ protein YP_007590761.1 PFAM: Cation efflux family YP_007590762.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase YP_007590763.1 PFAM: RIO1 family YP_007590764.1 PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1 YP_007590765.1 PFAM: S4 domain; TIGRFAM: pseudouridine synthase YP_007590767.1 PFAM: HDOD domain YP_007590768.1 PFAM: Ion channel YP_007590769.1 PFAM: Acetyltransferase (GNAT) family YP_007590770.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) YP_007590772.1 PFAM: PA domain; Peptidase family M28; Transferrin receptor-like dimerisation domain YP_007590773.1 PFAM: Prolyl oligopeptidase family YP_007590774.1 PFAM: Zinc carboxypeptidase YP_007590775.1 PFAM: PA domain; Peptidase family M28 YP_007590776.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_007590778.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_007590781.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases YP_007590782.1 PFAM: SPFH domain / Band 7 family YP_007590783.1 PFAM: NfeD-like YP_007590784.1 PFAM: Cupin domain YP_007590785.1 PFAM: 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase YP_007590787.1 PFAM: Protein of unknown function (DUF3014) YP_007590789.1 PFAM: ABC-2 type transporter YP_007590790.1 PFAM: ABC transporter YP_007590791.1 PFAM: Sodium/hydrogen exchanger family; TIGRFAM: Na+/H+ antiporter, bacterial form YP_007590792.1 PFAM: Lipocalin-like domain YP_007590793.1 PFAM: Asparaginase YP_007590794.1 PFAM: MarR family YP_007590795.1 PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, Ohr subfamily YP_007590796.1 PFAM: GAF domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_007590797.1 PFAM: ABC transporter YP_007590798.1 PFAM: Binding-protein-dependent transport system inner membrane component; Substrate binding domain of ABC-type glycine betaine transport system YP_007590799.1 PFAM: PhnA protein; PhnA Zinc-Ribbon; TIGRFAM: alkylphosphonate utilization operon protein PhnA YP_007590800.1 PFAM: Putative phosphatase (DUF442); TIGRFAM: TIGR01244 family protein YP_007590801.1 PFAM: EamA-like transporter family YP_007590803.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family YP_007590804.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_007590805.1 PFAM: OsmC-like protein YP_007590806.1 PFAM: Cytochrome C oxidase subunit II, periplasmic domain YP_007590807.1 PFAM: Cytochrome C and Quinol oxidase polypeptide I YP_007590808.1 PFAM: SCO1/SenC YP_007590810.1 PFAM: Branched-chain amino acid transport protein (AzlD) YP_007590811.1 PFAM: AzlC protein YP_007590812.1 PFAM: MarR family YP_007590813.1 PFAM: Fusaric acid resistance protein family YP_007590814.1 PFAM: Protein of unknown function (DUF1656) YP_007590815.1 PFAM: HlyD family secretion protein YP_007590816.1 PFAM: FAD binding domain; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family YP_007590818.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain YP_007590819.1 PFAM: Amino acid permease YP_007590820.1 manually curated YP_007590822.1 PFAM: Transposase DDE domain; Transposase domain (DUF772) YP_007590823.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_007590825.1 PFAM: Protein of unknown function (DUF3224) YP_007590826.1 PFAM: Major Facilitator Superfamily YP_007590827.1 PFAM: Glutathione S-transferase, C-terminal domain YP_007590828.1 PFAM: Bacterial protein of unknown function (DUF899) YP_007590829.1 PFAM: YCII-related domain YP_007590830.1 PFAM: AhpC/TSA family YP_007590831.1 PFAM: Protoglobin YP_007590832.1 PFAM: HxlR-like helix-turn-helix YP_007590833.1 PFAM: Sigma-70 region 2 YP_007590834.1 PFAM: YCII-related domain YP_007590835.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YP_007590837.1 PFAM: NADPH-dependent FMN reductase YP_007590838.1 PFAM: Protein of unknown function (DUF752) YP_007590839.1 PFAM: M61 glycyl aminopeptidase YP_007590842.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_007590845.1 PFAM: AhpC/TSA family YP_007590847.1 PFAM: Ferrochelatase; TIGRFAM: ferrochelatase YP_007590848.1 PFAM: Flavin containing amine oxidoreductase; TIGRFAM: protoporphyrinogen oxidase YP_007590850.1 PFAM: Chlorite dismutase YP_007590853.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_007590855.1 manually curated YP_007590858.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain YP_007590859.1 PFAM: FAD dependent oxidoreductase YP_007590860.1 PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain YP_007590862.1 PFAM: Transposase IS200 like YP_007590863.1 PFAM: MmgE/PrpD family YP_007590864.1 PFAM: (2R)-phospho-3-sulfolactate synthase (ComA) YP_007590865.1 PFAM: Transposase IS200 like YP_007590866.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_007590867.1 PFAM: Transposase IS200 like YP_007590868.1 PFAM: Arginase family YP_007590869.1 PFAM: Transposase IS200 like YP_007590870.1 manually curated YP_007590871.1 PFAM: MTH538 TIR-like domain (DUF1863) YP_007590874.1 PFAM: Domain of unknown function (DUF1814) YP_007590875.1 PFAM: ArgK protein; Methylmalonyl-CoA mutase; B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; methylmalonyl-CoA mutase C-terminal domain YP_007590877.1 PFAM: Bacterial regulatory proteins, tetR family YP_007590878.1 PFAM: Peptidase family M48 YP_007590880.1 PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YP_007590881.1 PFAM: Phospholipase D Active site motif YP_007590882.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_007590883.1 PFAM: Autotransporter beta-domain; Subtilase family; TIGRFAM: autotransporter-associated beta strand repeat YP_007590884.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_007590886.1 PFAM: Carboxyl transferase domain YP_007590887.1 PFAM: Hsp70 protein YP_007590889.1 PFAM: Iron permease FTR1 family; TIGRFAM: FTR1 family protein YP_007590891.1 PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA YP_007590892.1 PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27 YP_007590893.1 PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21 YP_007590894.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2059) YP_007590895.1 PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit YP_007590896.1 PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family YP_007590897.1 PFAM: AraC-like ligand binding domain YP_007590898.1 PFAM: Acetyltransferase (GNAT) family YP_007590900.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_007590901.1 PFAM: Rhodanese-like domain YP_007590902.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase YP_007590903.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_007590904.1 PFAM: Protein of unknown function (DUF1684) YP_007590905.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL YP_007590906.1 PFAM: N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes; LysM domain YP_007590907.1 PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family YP_007590908.1 PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF N-terminal region; yjeF C-terminal region, hydroxyethylthiazole kinase-related YP_007590909.1 PFAM: Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, putative YP_007590910.1 PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase YP_007590911.1 PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; cytidyltransferase-related domain YP_007590912.1 PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_007590913.1 PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase YP_007590914.1 PFAM: Poly A polymerase head domain; TIGRFAM: poly(A) polymerase YP_007590915.1 PFAM: Domain of unknown function (DUF3470) YP_007590916.1 PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase YP_007590917.1 PFAM: ACT domain YP_007590918.1 PFAM: AhpC/TSA family YP_007590919.1 PFAM: PhoH-like protein YP_007590920.1 PFAM: Aspartyl/Asparaginyl beta-hydroxylase YP_007590921.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007590922.1 PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain YP_007590923.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NAD-dependent, mitochondrial type; isopropylmalate/isohomocitrate dehydrogenases YP_007590924.1 PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain YP_007590925.1 PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin, GrxC family YP_007590926.1 PFAM: Peptidase family M48 YP_007590927.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB YP_007590928.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: phosphate regulon sensor kinase PhoR YP_007590929.1 PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1 YP_007590930.1 PFAM: Ppx/GppA phosphatase family; TIGRFAM: exopolyphosphatase YP_007590931.1 PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YP_007590932.1 TIGRFAM: UDP-2,3-diacylglucosamine hydrolase YP_007590933.1 PFAM: Phage integrase family YP_007590935.1 PFAM: Protein of unknown function (DUF3296) YP_007590936.1 PFAM: Prophage CP4-57 regulatory protein (AlpA) YP_007590939.1 PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc YP_007590944.1 PFAM: Domain of unknown function DUF87 YP_007590946.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2130) YP_007590947.1 PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA) YP_007590948.1 PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase YP_007590949.1 PFAM: RecX family YP_007590950.1 PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA YP_007590951.1 PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain YP_007590952.1 PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS YP_007590953.1 PFAM: Catalase; Catalase-related immune-responsive YP_007590954.1 PFAM: Response regulator receiver domain YP_007590955.1 PFAM: S4 domain YP_007590956.1 PFAM: Response regulator receiver domain YP_007590957.1 PFAM: Membrane transport protein YP_007590958.1 PFAM: Phosphotransferase enzyme family YP_007590959.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor YP_007590960.1 PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC YP_007590964.1 PFAM: MTH538 TIR-like domain (DUF1863) YP_007590966.1 PFAM: PAP2 superfamily YP_007590968.1 PFAM: Restriction endonuclease YP_007590970.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein YP_007590971.1 PFAM: Peptidase family M48 YP_007590972.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-queuosine tRNA(Asp) synthetase YP_007590973.1 PFAM: short chain dehydrogenase; TIGRFAM: acetoacetyl-CoA reductase YP_007590974.1 PFAM: Sel1 repeat YP_007590975.1 PFAM: ThiF family YP_007590976.1 PFAM: Cytochrome C' YP_007590977.1 PFAM: Protein of unknown function (DUF962) YP_007590978.1 PFAM: Pirin C-terminal cupin domain; Pirin YP_007590979.1 PFAM: NADH:flavin oxidoreductase / NADH oxidase family YP_007590981.1 PFAM: 'Cold-shock' DNA-binding domain YP_007590982.1 PFAM: 'Cold-shock' DNA-binding domain YP_007590984.1 PFAM: Protein of unknown function (DUF1006) YP_007590986.1 PFAM: Phospholipase A1 YP_007590987.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase YP_007590988.1 PFAM: Glutathione peroxidase YP_007590989.1 PFAM: ABC transporter; NIL domain YP_007590990.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007590991.1 PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family YP_007590992.1 PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM: nicotinate phosphoribosyltransferase YP_007590993.1 PFAM: Cytochrome c YP_007590994.1 PFAM: Predicted aminopeptidase (DUF2265) YP_007590997.1 PFAM: Rhomboid family YP_007590998.1 PFAM: Phenazine biosynthesis-like protein; TIGRFAM: phenazine biosynthesis protein PhzF family YP_007590999.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase YP_007591000.1 PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family YP_007591001.1 PFAM: Protein of unknown function (DUF520) YP_007591002.1 PFAM: Protein of unknown function (DUF1109) YP_007591003.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007591004.1 PFAM: Redoxin; Cytochrome C biogenesis protein transmembrane region YP_007591005.1 PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase YP_007591006.1 TIGRFAM: PEP-CTERM protein sorting domain YP_007591007.1 PFAM: Thioredoxin; TIGRFAM: thioredoxin YP_007591008.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_007591009.1 PFAM: LysE type translocator YP_007591010.1 PFAM: NADPH-dependent FMN reductase YP_007591011.1 PFAM: Serine carboxypeptidase YP_007591012.1 manually curated YP_007591013.1 manually curated YP_007591014.1 TIGRFAM: RHS repeat-associated core domain YP_007591016.1 manually curated YP_007591017.1 TIGRFAM: RHS repeat-associated core domain YP_007591018.1 PFAM: RHS Repeat; TIGRFAM: YD repeat (two copies) YP_007591019.1 PFAM: Uncharacterized conserved protein (DUF2260); TIGRFAM: probable methyltransferase YP_007591020.1 PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: TIGR03440 family protein YP_007591023.1 PFAM: Putative RNA methylase family UPF0020; S-adenosylmethionine-dependent methyltransferase; THUMP domain YP_007591025.1 PFAM: N-acetylmuramoyl-L-alanine amidase YP_007591029.1 PFAM: Saccharopine dehydrogenase YP_007591030.1 PFAM: Acyl-CoA thioesterase; TIGRFAM: acyl-CoA thioesterase II YP_007591032.1 PFAM: Arginine-tRNA-protein transferase, C terminus; Arginine-tRNA-protein transferase, N terminus YP_007591033.1 PFAM: Conserved region in glutamate synthase YP_007591034.1 PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylglycinamide formyltransferase 2 YP_007591035.1 PFAM: SPFH domain / Band 7 family YP_007591037.1 PFAM: CAAX amino terminal protease family YP_007591039.1 PFAM: Protein of unknown function (DUF423) YP_007591040.1 PFAM: SCO1/SenC YP_007591041.1 PFAM: Protein of unknown function (DUF461) YP_007591042.1 PFAM: Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) YP_007591043.1 PFAM: ABC-type uncharacterized transport system YP_007591045.1 PFAM: ABC transporter YP_007591047.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_007591048.1 PFAM: Histidine kinase YP_007591050.1 PFAM: Septum formation inhibitor MinC, C-terminal domain; Septum formation inhibitor MinC, N-terminal domain; TIGRFAM: septum site-determining protein MinC YP_007591051.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: septum site-determining protein MinD YP_007591052.1 PFAM: Septum formation topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE YP_007591054.1 PFAM: ChaB YP_007591055.1 PFAM: Methylpurine-DNA glycosylase (MPG); TIGRFAM: DNA-3-methyladenine glycosylase (3mg) YP_007591056.1 PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain YP_007591057.1 PFAM: Isocitrate lyase family YP_007591058.1 PFAM: Uncharacterized conserved protein (DUF2235) YP_007591059.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily YP_007591060.1 PFAM: CrcB-like protein; TIGRFAM: protein CrcB YP_007591061.1 PFAM: Uncharacterized ACR, COG1993 YP_007591062.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase YP_007591063.1 PFAM: Transposase YP_007591064.1 PFAM: Integrase core domain YP_007591065.1 manually curated YP_007591066.1 PFAM: MAPEG family YP_007591067.1 PFAM: YCII-related domain YP_007591068.1 PFAM: TraB family YP_007591069.1 PFAM: Aldo/keto reductase family YP_007591070.1 PFAM: EamA-like transporter family YP_007591071.1 PFAM: AsnC family YP_007591072.1 PFAM: DNA gyrase C-terminal domain, beta-propeller; DNA gyrase/topoisomerase IV, subunit A; TIGRFAM: DNA topoisomerase IV, A subunit, proteobacterial YP_007591074.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_007591075.1 PFAM: NADP oxidoreductase coenzyme F420-dependent YP_007591076.1 PFAM: short chain dehydrogenase YP_007591078.1 PFAM: Biotin/lipoate A/B protein ligase family YP_007591079.1 PFAM: NUDIX domain YP_007591080.1 PFAM: Predicted periplasmic protein (DUF2233) YP_007591081.1 PFAM: Penicillin amidase YP_007591082.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_007591083.1 PFAM: ApbE family; TIGRFAM: PEP-CTERM protein sorting domain YP_007591084.1 PFAM: FMN-binding domain YP_007591085.1 PFAM: Cytochrome C oxidase subunit II, periplasmic domain YP_007591086.1 PFAM: Periplasmic copper-binding protein (NosD); TIGRFAM: parallel beta-helix repeat (two copies) YP_007591087.1 PFAM: ABC transporter YP_007591089.1 PFAM: NosL YP_007591090.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family YP_007591091.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: succinyl-diaminopimelate desuccinylase, proteobacterial clade YP_007591092.1 PFAM: Predicted small integral membrane protein (DUF2165) YP_007591093.1 PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family YP_007591094.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase YP_007591097.1 PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit YP_007591098.1 PFAM: Type II transport protein GspH; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_007591099.1 PFAM: short chain dehydrogenase YP_007591100.1 PFAM: Universal stress protein family YP_007591101.1 PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_007591102.1 PFAM: Bacterial regulatory proteins, tetR family YP_007591104.1 PFAM: HlyD family secretion protein YP_007591105.1 PFAM: ABC transporter YP_007591108.1 PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family YP_007591110.1 PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain YP_007591111.1 PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00730 family protein YP_007591112.1 PFAM: Cytochrome C' YP_007591113.1 PFAM: OsmC-like protein YP_007591114.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007591115.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007591116.1 PFAM: Cytochrome b(N-terminal)/b6/petB YP_007591123.1 PFAM: Mu transposase, C-terminal; Mu DNA binding, I gamma subdomain; Bacteriophage Mu transposase; Mu DNA-binding domain YP_007591124.1 PFAM: Mu B transposition protein, C terminal YP_007591129.1 PFAM: Protein of unknown function (DUF3164) YP_007591136.1 PFAM: Protein of unknown function (DUF1018) YP_007591144.1 PFAM: Transglycosylase SLT domain YP_007591147.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger YP_007591148.1 PFAM: Protein of unknown function (DUF2730) YP_007591150.1 PFAM: Protein of unknown function (DUF3486) YP_007591151.1 PFAM: Terminase-like family YP_007591152.1 PFAM: Protein of unknown function (DUF935) YP_007591154.1 PFAM: Phage Mu protein F like protein YP_007591155.1 PFAM: Phage virion morphogenesis family; TIGRFAM: phage virion morphogenesis (putative tail completion) protein YP_007591156.1 PFAM: Mu-like prophage I protein YP_007591158.1 PFAM: Mu-like prophage major head subunit gpT YP_007591161.1 PFAM: Protein of unknown function (DUF1320) YP_007591168.1 PFAM: Lambda phage tail tape-measure protein (Tape_meas_lam_C); Prophage tail length tape measure protein YP_007591172.1 PFAM: Phage conserved hypothetical protein BR0599; TIGRFAM: phage conserved hypothetical protein BR0599 YP_007591178.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam) YP_007591181.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_007591182.1 PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain YP_007591185.1 PFAM: Cytochrome c YP_007591186.1 PFAM: Cytochrome C and Quinol oxidase polypeptide I YP_007591187.1 PFAM: Cytochrome b(N-terminal)/b6/petB YP_007591188.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_007591189.1 PFAM: Acetyltransferase (GNAT) family YP_007591190.1 PFAM: Universal stress protein family YP_007591191.1 PFAM: Predicted membrane protein (DUF2238) YP_007591192.1 PFAM: Cytochrome C and Quinol oxidase polypeptide I YP_007591193.1 PFAM: Invasion gene expression up-regulator, SirB YP_007591194.1 PFAM: Pyridoxal-dependent decarboxylase conserved domain YP_007591195.1 PFAM: Pyridoxal-phosphate dependent enzyme YP_007591196.1 PFAM: Prephenate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus YP_007591199.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein YP_007591200.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein YP_007591201.1 PFAM: ABC transporter; TOBE domain; TIGRFAM: molybdenum ABC transporter, ATP-binding protein YP_007591202.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein YP_007591203.1 PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator) YP_007591204.1 PFAM: Major Facilitator Superfamily YP_007591205.1 PFAM: PPIC-type PPIASE domain YP_007591206.1 PFAM: Nitrate reductase gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit YP_007591207.1 PFAM: Nitrate reductase delta subunit; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone YP_007591208.1 TIGRFAM: nitrate reductase, beta subunit YP_007591209.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: respiratory nitrate reductase, alpha subunit YP_007591212.1 PFAM: MoaE protein YP_007591214.1 PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain YP_007591215.1 PFAM: MoaC family; Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC; molybdenum cofactor synthesis domain YP_007591216.1 PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial YP_007591218.1 PFAM: MoeZ/MoeB domain; Rhodanese-like domain; ThiF family YP_007591219.1 PFAM: Phosphorylase superfamily; TIGRFAM: purine-nucleoside phosphorylase, family 1 (deoD) YP_007591220.1 PFAM: Metalloenzyme superfamily; TIGRFAM: phosphopentomutase YP_007591221.1 PFAM: Glycosyl transferase family, a/b domain; Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: thymidine phosphorylase; pyrimidine-nucleoside phosphorylase YP_007591222.1 PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase YP_007591223.1 PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family YP_007591224.1 PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain YP_007591225.1 PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA YP_007591226.1 PFAM: FAD binding domain; TIGRFAM: L-aspartate oxidase YP_007591227.1 PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit YP_007591228.1 PFAM: DGC domain YP_007591232.1 PFAM: Multicopper oxidase; Cytochrome c; TIGRFAM: nitrite reductase, copper-containing YP_007591233.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_007591234.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007591235.1 PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_007591236.1 PFAM: Domain of unknown function (DUF3412); Possible lysine decarboxylase YP_007591238.1 PFAM: Acyltransferase YP_007591239.1 PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family YP_007591240.1 PFAM: short chain dehydrogenase YP_007591241.1 PFAM: Glutaredoxin; TIGRFAM: monothiol glutaredoxin, Grx4 family YP_007591242.1 PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain YP_007591243.1 PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein YP_007591244.1 PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein YP_007591245.1 PFAM: Trm112p-like protein YP_007591246.1 PFAM: Protein of unknown function (DUF1631) YP_007591247.1 PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase YP_007591248.1 PFAM: Protein of unknown function (DUF3301) YP_007591249.1 PFAM: Stringent starvation protein B YP_007591250.1 PFAM: Glutathione S-transferase, N-terminal domain YP_007591251.1 PFAM: Cytochrome C1 family YP_007591252.1 PFAM: Cytochrome b(N-terminal)/b6/petB; Cytochrome b(C-terminal)/b6/petD YP_007591253.1 PFAM: Rieske [2Fe-2S] domain; Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_007591254.1 PFAM: Trypsin; TIGRFAM: periplasmic serine pepetdase DegS YP_007591255.1 PFAM: Transglycosylase SLT domain YP_007591256.1 PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family YP_007591257.1 PFAM: Acetyltransferase (GNAT) family YP_007591258.1 TIGRFAM: ABC transporter efflux protein, DrrB family YP_007591259.1 PFAM: ABC transporter YP_007591260.1 PFAM: HlyD family secretion protein YP_007591261.1 PFAM: Bacterial regulatory proteins, tetR family YP_007591262.1 PFAM: PhoH-like protein YP_007591263.1 PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family YP_007591264.1 PFAM: CBS domain; Transporter associated domain; manually curated YP_007591266.1 PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) YP_007591267.1 PFAM: NUDIX domain YP_007591270.1 PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor YP_007591271.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007591272.1 PFAM: CheB methylesterase; Response regulator receiver domain YP_007591273.1 PFAM: CheD YP_007591274.1 PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain YP_007591275.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007591276.1 PFAM: CheW-like domain YP_007591277.1 PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007591278.1 PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain YP_007591279.1 PFAM: Response regulator receiver domain YP_007591280.1 PFAM: STAS domain YP_007591281.1 PFAM: Flagellar hook-length control protein FliK YP_007591283.1 PFAM: Protein of unknown function (DUF2802) YP_007591284.1 PFAM: CheW-like domain YP_007591285.1 PFAM: OmpA family YP_007591286.1 PFAM: MotA/TolQ/ExbB proton channel family YP_007591287.1 PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain YP_007591288.1 PFAM: Chemotaxis phosphatase, CheZ YP_007591289.1 PFAM: Response regulator receiver domain YP_007591290.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family YP_007591291.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_007591292.1 PFAM: SRP54-type protein, GTPase domain; TIGRFAM: flagellar biosynthetic protein FlhF YP_007591293.1 PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA YP_007591294.1 PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flagellar biosynthetic protein FlhB YP_007591295.1 PFAM: Bacterial export proteins, family 1; TIGRFAM: flagellar biosynthetic protein FliR YP_007591296.1 PFAM: Bacterial export proteins, family 3; TIGRFAM: flagellar biosynthetic protein FliQ YP_007591297.1 PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP YP_007591298.1 PFAM: Flagellar biosynthesis protein, FliO; TIGRFAM: flagellar biosynthetic protein FliO YP_007591299.1 PFAM: Surface presentation of antigens (SPOA); TIGRFAM: flagellar motor switch protein FliN YP_007591300.1 PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM YP_007591301.1 PFAM: Flagellar basal body-associated protein FliL YP_007591302.1 PFAM: Flagellar hook-length control protein FliK YP_007591303.1 PFAM: Flagellar FliJ protein; TIGRFAM: flagellar export protein FliJ YP_007591304.1 PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family; flagellar protein export ATPase FliI YP_007591305.1 PFAM: Flagellar assembly protein FliH YP_007591306.1 PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG YP_007591307.1 PFAM: Secretory protein of YscJ/FliF family; Flagellar M-ring protein C-terminal; TIGRFAM: flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) YP_007591308.1 PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE YP_007591309.1 PFAM: Flagellar regulatory protein FleQ; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_007591311.1 PFAM: Flagellar protein FliT YP_007591312.1 PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS YP_007591313.1 PFAM: Flagellar hook-associated protein 2 C-terminus; Flagellin hook IN motif YP_007591314.1 PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region YP_007591315.1 PFAM: Bacterial flagellin N-terminal helical region; TIGRFAM: flagellar hook-associated protein 3 YP_007591316.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar hook-associated protein FlgK YP_007591317.1 PFAM: Rod binding protein; Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ YP_007591318.1 PFAM: Flagellar P-ring protein YP_007591319.1 PFAM: Flagellar L-ring protein YP_007591320.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB; fagellar hook-basal body proteins; flagellar basal-body rod protein FlgG, Gram-negative bacteria YP_007591321.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins YP_007591322.1 PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); Flagellar basal body protein FlaE; TIGRFAM: fagellar hook-basal body proteins YP_007591323.1 PFAM: Flagellar hook capping protein YP_007591324.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC YP_007591325.1 PFAM: Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB YP_007591326.1 PFAM: CheW-like domain; Response regulator receiver domain YP_007591327.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007591328.1 PFAM: SAF domain; TIGRFAM: flagella basal body P-ring formation protein FlgA YP_007591329.1 PFAM: Anti-sigma-28 factor, FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor FlgM YP_007591330.1 PFAM: FlgN protein YP_007591331.1 PFAM: EAL domain; HDOD domain YP_007591332.1 PFAM: Protein of unknown function (DUF1625) YP_007591333.1 PFAM: Metallo-beta-lactamase superfamily YP_007591335.1 PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase YP_007591338.1 PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain YP_007591339.1 PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family YP_007591340.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY YP_007591341.1 PFAM: AsmA family YP_007591342.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: A/G-specific adenine glycosylase YP_007591343.1 PFAM: Bacterial Fe(2+) trafficking YP_007591350.1 PFAM: Protein kinase domain; Transcriptional regulatory protein, C terminal YP_007591351.1 PFAM: H-NS histone family YP_007591354.1 PFAM: Protein of unknown function (DUF2813) YP_007591357.1 PFAM: PEP-CTERM motif; TIGRFAM: PEP-CTERM protein sorting domain YP_007591361.1 PFAM: PEP-CTERM motif; TIGRFAM: PEP-CTERM protein sorting domain YP_007591362.1 PFAM: ThiF family YP_007591363.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase YP_007591364.1 PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: putative PEP-CTERM system histidine kinase YP_007591365.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: PEP-CTERM-box response regulator transcription factor YP_007591366.1 TIGRFAM: putative PEP-CTERM system TPR-repeat lipoprotein YP_007591368.1 PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor-related protein YP_007591372.1 PFAM: Polysaccharide pyruvyl transferase YP_007591373.1 PFAM: Glycosyl transferase family 2 YP_007591374.1 PFAM: Phosphotransferase enzyme family YP_007591375.1 PFAM: Polysaccharide biosynthesis protein; manually curated YP_007591376.1 PFAM: Methyltransferase domain YP_007591378.1 PFAM: O-Antigen ligase; TIGRFAM: probable O-glycosylation ligase, exosortase A-associated YP_007591381.1 PFAM: Glycosyl transferases group 1; TIGRFAM: PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family YP_007591382.1 PFAM: Glycosyl transferases group 1 YP_007591383.1 PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); exosortase A system-associated amidotransferase 1 YP_007591384.1 PFAM: Glycosyl transferases group 1; TIGRFAM: sugar transferase, PEP-CTERM/EpsH1 system associated YP_007591385.1 PFAM: Protein of unknown function (DUF3485); Transmembrane exosortase (Exosortase_EpsH); TIGRFAM: EpsI family protein; exosortase/archaeosortase family protein; exosortase; exosortase A YP_007591386.1 TIGRFAM: sugar transferase, PEP-CTERM/EpsH1 system associated YP_007591387.1 PFAM: FemAB family; TIGRFAM: FemAB-related protein, PEP-CTERM system-associated YP_007591388.1 PFAM: Domain of unknown function (DUF3473); Polysaccharide deacetylase; TIGRFAM: polysaccharide deacetylase family protein, PEP-CTERM locus subfamily YP_007591389.1 PFAM: Uncharacterized conserved protein (DUF2075); TIGRFAM: putative secretion ATPase, PEP-CTERM locus subfamily YP_007591390.1 TIGRFAM: uncharacterized protein, PEP-CTERM system associated YP_007591391.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: exopolysaccharide/PEPCTERM locus tyrosine autokinase; capsular exopolysaccharide family YP_007591392.1 PFAM: Chain length determinant protein; TIGRFAM: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily YP_007591393.1 PFAM: Polysaccharide biosynthesis/export protein; SLBB domain; TIGRFAM: putative polysaccharide export protein, PEP-CTERM sytem-associated YP_007591394.1 PFAM: Bacterial sugar transferase; TIGRFAM: sugar transferase, PEP-CTERM system associated; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_007591397.1 PFAM: Protein kinase domain; HAMP domain YP_007591398.1 PFAM: FHA domain YP_007591400.1 PFAM: PA domain; Peptidase family M28 YP_007591401.1 PFAM: Putative esterase YP_007591402.1 PFAM: Alpha amylase, catalytic domain YP_007591403.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent receptor YP_007591404.1 PFAM: Tryptophan halogenase YP_007591405.1 PFAM: Alpha amylase, catalytic domain YP_007591406.1 PFAM: Glycosyl hydrolases family 31 YP_007591407.1 PFAM: Alpha amylase, N-terminal ig-like domain; Alpha amylase, catalytic domain YP_007591408.1 PFAM: Glycosyl hydrolases family 39 YP_007591410.1 PFAM: Major Facilitator Superfamily YP_007591411.1 PFAM: Alpha amylase, catalytic domain YP_007591412.1 PFAM: Acetyltransferase (GNAT) family YP_007591413.1 PFAM: Glutathione-dependent formaldehyde-activating enzyme YP_007591415.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2241) YP_007591416.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_007591417.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_007591418.1 PFAM: Sugar (and other) transporter; TIGRFAM: MFS transporter, sugar porter (SP) family YP_007591419.1 PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family YP_007591420.1 PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain YP_007591422.1 PFAM: Phosphate transporter family YP_007591424.1 PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain YP_007591425.1 PFAM: SpoU rRNA Methylase family; TIGRFAM: RNA methyltransferase, TrmH family, group 1 YP_007591426.1 PFAM: Inositol monophosphatase family YP_007591427.1 PFAM: Bacterial dnaA protein; TIGRFAM: DnaA regulatory inactivator Hda YP_007591428.1 PFAM: Domain of unknown function DUF20 YP_007591429.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2066) YP_007591430.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase YP_007591431.1 PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent YP_007591432.1 PFAM: Protein of unknown function (DUF3108) YP_007591433.1 PFAM: Predicted metal-binding integral membrane protein (DUF2182) YP_007591434.1 PFAM: Bacterial protein of unknown function (DUF899) YP_007591437.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_007591438.1 PFAM: BolA-like protein YP_007591439.1 PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein YP_007591440.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family YP_007591441.1 PFAM: Protein of unknown function (DUF1239) YP_007591442.1 PFAM: OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA YP_007591443.1 PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter YP_007591444.1 PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain; TIGRFAM: RNA polymerase sigma-54 factor YP_007591445.1 PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein YP_007591446.1 PFAM: HPr Serine kinase N terminus; HPr Serine kinase C-terminal domain; TIGRFAM: Hpr(Ser) kinase/phosphatase YP_007591447.1 PFAM: P-loop ATPase protein family YP_007591448.1 PFAM: PTS system fructose IIA component YP_007591449.1 PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family YP_007591450.1 PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase YP_007591452.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_007591453.1 PFAM: Conserved hypothetical protein 698; TIGRFAM: conserved hypothetical integral membrane protein YP_007591455.1 PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ YP_007591456.1 PFAM: Inner membrane protein CreD YP_007591457.1 PFAM: Phospholipase/Carboxylesterase YP_007591458.1 PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase YP_007591459.1 PFAM: DoxX YP_007591460.1 PFAM: NADP oxidoreductase coenzyme F420-dependent YP_007591461.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_007591462.1 PFAM: Methyltransferase domain YP_007591465.1 PFAM: Uncharacterised BCR, COG1937 YP_007591466.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_007591468.1 PFAM: DEAD_2; DEAD/DEAH box helicase YP_007591469.1 PFAM: AhpC/TSA family YP_007591470.1 PFAM: MAPEG family YP_007591472.1 PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein 1B; manually curated YP_007591473.1 PFAM: NAD dependent epimerase/dehydratase family YP_007591475.1 PFAM: Region found in RelA / SpoT proteins; TGS domain; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family YP_007591477.1 PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); Domain of unknown function (DUF3418); DEAD/DEAH box helicase; Domain of unknown function (DUF1605); TIGRFAM: ATP-dependent helicase HrpA YP_007591478.1 PFAM: Ferritin-like domain YP_007591479.1 PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16) YP_007591481.1 PFAM: RTX toxin acyltransferase family YP_007591482.1 PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1 YP_007591483.1 PFAM: Alpha amylase, catalytic domain YP_007591486.1 PFAM: Peptidase C39 family; ABC transporter transmembrane region; ABC transporter YP_007591487.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family YP_007591489.1 PFAM: Glycosyl transferase family 2; Glycosyl hydrolases family 17 YP_007591490.1 PFAM: Surface antigen variable number repeat; Surface antigen YP_007591492.1 PFAM: Family of unknown function (DUF490) YP_007591493.1 PFAM: Peptidase family M13 YP_007591494.1 PFAM: Domain of unknown function (DU1801) YP_007591495.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_007591497.1 PFAM: Protein of unknown function (DUF559) YP_007591498.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Amino acid kinase family; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase; aspartate kinase; manually curated YP_007591499.1 PFAM: Fumarase C-terminus; Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region YP_007591500.1 PFAM: Autotransporter beta-domain YP_007591501.1 PFAM: Phenazine biosynthesis-like protein; TIGRFAM: phenazine biosynthesis protein PhzF family YP_007591502.1 PFAM: Autotransporter beta-domain YP_007591503.1 PFAM: Amino acid permease YP_007591504.1 PFAM: [2Fe-2S] binding domain YP_007591505.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase YP_007591506.1 PFAM: Protein of unknown function (DUF998) YP_007591507.1 manually curated YP_007591508.1 manually curated YP_007591509.1 PFAM: Transposase DDE domain; Transposase domain (DUF772) YP_007591510.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase YP_007591514.1 manually curated YP_007591517.1 PFAM: Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain YP_007591519.1 PFAM: Maltose operon periplasmic protein precursor (MalM); manually curated YP_007591520.1 PFAM: Protein of unknown function DUF58 YP_007591521.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_007591524.1 PFAM: Integral membrane protein DUF95 YP_007591525.1 PFAM: RDD family YP_007591526.1 PFAM: RDD family YP_007591527.1 PFAM: SET domain YP_007591529.1 PFAM: Acyl-CoA dehydrogenase N terminal; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_007591532.1 PFAM: RNB domain YP_007591533.1 PFAM: Acetyltransferase (GNAT) family YP_007591534.1 PFAM: Transposase DDE domain YP_007591535.1 PFAM: SapC YP_007591536.1 PFAM: HNH endonuclease YP_007591537.1 PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase YP_007591539.1 PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific YP_007591541.1 PFAM: Zinc-binding dehydrogenase YP_007591542.1 PFAM: Beta-eliminating lyase YP_007591543.1 PFAM: Predicted permease YjgP/YjgQ family YP_007591544.1 PFAM: Predicted permease YjgP/YjgQ family YP_007591545.1 PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain YP_007591546.1 PFAM: DNA polymerase III chi subunit, HolC YP_007591547.1 PFAM: Y_Y_Y domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Two component regulator propeller; His Kinase A (phosphoacceptor) domain YP_007591548.1 PFAM: Y_Y_Y domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Two component regulator propeller; His Kinase A (phosphoacceptor) domain YP_007591549.1 PFAM: GTPase of unknown function YP_007591550.1 PFAM: Dienelactone hydrolase family YP_007591551.1 PFAM: FAD binding domain; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family YP_007591552.1 PFAM: FAD binding domain; TIGRFAM: 2-polyprenyl-6-methoxyphenol 4-hydroxylase; Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; manually curated; 2-octaprenyl-6-methoxyphenol hydroxylase YP_007591554.1 PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase YP_007591555.1 PFAM: Histone deacetylase domain YP_007591556.1 PFAM: Organic solvent tolerance protein YP_007591557.1 PFAM: SurA N-terminal domain; PPIC-type PPIASE domain YP_007591558.1 PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase YP_007591559.1 PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase YP_007591560.1 PFAM: Protein of unknown function (DUF525) YP_007591561.1 PFAM: Calcineurin-like phosphoesterase; TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YP_007591563.1 PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit YP_007591564.1 PFAM: Peptidase family M23 YP_007591565.1 PFAM: Protein of unknown function (DUF721) YP_007591566.1 PFAM: UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase YP_007591567.1 PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ YP_007591568.1 PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA YP_007591569.1 PFAM: Cell division protein FtsQ; POTRA domain, FtsQ-type YP_007591570.1 PFAM: D-ala D-ala ligase N-terminus; D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase YP_007591571.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase YP_007591572.1 PFAM: Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase YP_007591573.1 PFAM: Cell cycle protein; TIGRFAM: cell division protein FtsW YP_007591574.1 PFAM: Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1; Glycosyl transferase family 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase YP_007591575.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase YP_007591576.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase YP_007591577.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain YP_007591578.1 PFAM: Cell division protein FtsL; TIGRFAM: cell division protein FtsL YP_007591579.1 PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW YP_007591580.1 PFAM: MraZ protein; TIGRFAM: mraZ protein YP_007591581.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family YP_007591582.1 PFAM: LppC putative lipoprotein YP_007591583.1 PFAM: Uncharacterised protein family UPF0102; TIGRFAM: TIGR00252 family protein YP_007591584.1 PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD YP_007591585.1 PFAM: Uracil DNA glycosylase superfamily YP_007591586.1 PFAM: Nucleoside H+ symporter; TIGRFAM: nucleoside transporter YP_007591587.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_007591589.1 PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family YP_007591590.1 PFAM: Cobalamin-independent synthase, N-terminal domain; Cobalamin-independent synthase, Catalytic domain; TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase YP_007591591.1 PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase YP_007591592.1 PFAM: ABC transporter YP_007591593.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain YP_007591594.1 PFAM: GIY-YIG catalytic domain YP_007591595.1 PFAM: Phosphoenolpyruvate carboxylase YP_007591596.1 PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase YP_007591597.1 PFAM: SIS domain; Helix-turn-helix domain, rpiR family YP_007591598.1 PFAM: Amino acid permease YP_007591599.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YP_007591600.1 PFAM: D-aminoacylase, C-terminal region; Amidohydrolase family YP_007591601.1 PFAM: Protein of unknown function (DUF1611) YP_007591602.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_007591603.1 PFAM: D-aminoacylase, C-terminal region; Amidohydrolase family; Urease alpha-subunit, N-terminal domain YP_007591604.1 PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form YP_007591606.1 PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group I YP_007591607.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007591608.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007591609.1 PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family YP_007591610.1 PFAM: Protein of unknown function (DUF785) YP_007591611.1 PFAM: HNH endonuclease; Group II intron, maturase-specific domain; Reverse transcriptase (RNA-dependent DNA polymerase) YP_007591612.1 PFAM: FecR protein YP_007591613.1 PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase YP_007591614.1 PFAM: Protein of unknown function (DUF559) YP_007591615.1 PFAM: Citrate transporter; TrkA-C domain YP_007591616.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase YP_007591617.1 PFAM: Rieske [2Fe-2S] domain YP_007591619.1 PFAM: EamA-like transporter family YP_007591620.1 PFAM: Short chain fatty acid transporter; TIGRFAM: TIGR00366 family protein YP_007591621.1 PFAM: Predicted permease YP_007591622.1 PFAM: Predicted permease YP_007591623.1 PFAM: ABC transporter YP_007591624.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_007591625.1 PFAM: Fumarylacetoacetate (FAA) hydrolase family YP_007591626.1 PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein YP_007591627.1 PFAM: PA domain; Peptidase family M28 YP_007591629.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family YP_007591630.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_007591632.1 PFAM: Macro domain YP_007591634.1 PFAM: Tetratricopeptide repeat YP_007591635.1 PFAM: von Willebrand factor type A domain YP_007591637.1 PFAM: Protein of unknown function DUF58 YP_007591638.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_007591639.1 PFAM: Secretin and TonB N terminus short domain; Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein; TIGRFAM: type IV pilus secretin (or competence protein) PilQ YP_007591640.1 PFAM: Pilus assembly protein, PilP YP_007591641.1 PFAM: Pilus assembly protein, PilO YP_007591642.1 PFAM: Fimbrial assembly protein (PilN) YP_007591643.1 PFAM: Competence protein A; TIGRFAM: type IV pilus assembly protein PilM YP_007591644.1 PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family YP_007591646.1 PFAM: Citrate synthase; TIGRFAM: citrate synthase I (hexameric type) YP_007591647.1 PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31 YP_007591648.1 PFAM: Inosine-uridine preferring nucleoside hydrolase YP_007591649.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG YP_007591650.1 PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative YP_007591651.1 PFAM: HD domain; ACT domain; Region found in RelA / SpoT proteins; TGS domain; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family YP_007591652.1 PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit YP_007591653.1 PFAM: VacJ like lipoprotein YP_007591654.1 TIGRFAM: anti-anti-sigma factor YP_007591655.1 PFAM: Toluene tolerance, Ttg2 YP_007591656.1 PFAM: mce related protein YP_007591657.1 PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein YP_007591658.1 PFAM: ABC transporter YP_007591659.1 PFAM: Guanylate kinase; TIGRFAM: guanylate kinase YP_007591660.1 PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein YP_007591661.1 PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH YP_007591662.1 PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family YP_007591663.1 PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase YP_007591664.1 PFAM: Protein of unknown function (DUF1631) YP_007591665.1 PFAM: PilZ domain YP_007591666.1 PFAM: Metallopeptidase family M24 YP_007591668.1 PFAM: Bacterial Cytochrome Ubiquinol Oxidase YP_007591669.1 PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB) YP_007591670.1 PFAM: Membrane bound YbgT-like protein; TIGRFAM: cyd operon protein YbgT YP_007591671.1 PFAM: Aminopeptidase P, N-terminal domain; Metallopeptidase family M24 YP_007591672.1 PFAM: Uncharacterised protein family (UPF0149) YP_007591673.1 TIGRFAM: TIGR02449 family protein YP_007591674.1 PFAM: Cell division protein ZapA YP_007591675.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase YP_007591676.1 PFAM: Protein of unknown function DUF55 YP_007591677.1 PFAM: Ribose 5-phosphate isomerase A (phosphoriboisomerase A); TIGRFAM: ribose 5-phosphate isomerase YP_007591678.1 PFAM: CBS domain; Voltage gated chloride channel YP_007591679.1 PFAM: Ribosomal protein S9/S16 YP_007591680.1 PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type YP_007591681.1 PFAM: Ubiquinone biosynthesis protein COQ7 YP_007591682.1 PFAM: S-layer homology domain; Subtilase family YP_007591684.1 PFAM: GAF domain; FHA domain YP_007591685.1 PFAM: Protein kinase domain YP_007591686.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_007591687.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_007591689.1 PFAM: S-adenosylmethionine decarboxylase; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form YP_007591690.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_007591691.1 PFAM: Sulfite exporter TauE/SafE YP_007591693.1 PFAM: Indole-3-glycerol phosphate synthase YP_007591694.1 PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase YP_007591695.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase YP_007591696.1 PFAM: Uncharacterized protein conserved in bacteria N-term (DUF3322); Uncharacterized protein conserved in bacteria C-term(DUF2220) YP_007591699.1 PFAM: Protein of unknown function (DUF3375) YP_007591700.1 PFAM: PIN domain YP_007591702.1 PFAM: Sodium:dicarboxylate symporter family YP_007591704.1 PFAM: Helix-turn-helix domain, rpiR family; SIS domain YP_007591705.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; TIGRFAM: o-succinylbenzoate synthase YP_007591706.1 PFAM: NlpC/P60 family YP_007591707.1 PFAM: Protein of unknown function (DUF819) YP_007591708.1 PFAM: Transglutaminase-like superfamily YP_007591709.1 PFAM: TonB-dependent Receptor Plug Domain YP_007591710.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase YP_007591711.1 PFAM: Membrane dipeptidase (Peptidase family M19) YP_007591712.1 PFAM: Beta-lactamase YP_007591713.1 PFAM: D-ala-D-ala dipeptidase YP_007591714.1 PFAM: Beta-lactamase YP_007591715.1 PFAM: N-acetylmuramoyl-L-alanine amidase YP_007591716.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium) YP_007591717.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_007591718.1 PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family YP_007591719.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent receptor YP_007591720.1 PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain YP_007591721.1 PFAM: Amidohydrolase YP_007591722.1 PFAM: Melibiase YP_007591723.1 PFAM: EamA-like transporter family YP_007591724.1 PFAM: Tagatose 6 phosphate kinase; TIGRFAM: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit YP_007591725.1 PFAM: SIS domain; TIGRFAM: putative sugar isomerase, AgaS family YP_007591726.1 PFAM: BadF/BadG/BcrA/BcrD ATPase family YP_007591727.1 PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: anthranilate synthase component I, non-proteobacterial lineages YP_007591729.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: proteobacterial dedicated sortase system histidine kinase YP_007591731.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: proteobacterial dedicated sortase system response regulator YP_007591734.1 PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase YP_007591735.1 PFAM: DnaJ domain; Tellurite resistance protein TerB YP_007591736.1 PFAM: Cytochrome c YP_007591737.1 PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase YP_007591738.1 PFAM: Protein of unknown function (DUF962) YP_007591742.1 PFAM: Amino acid permease YP_007591744.1 PFAM: Uncharacterised protein family (UPF0104) YP_007591745.1 PFAM: impB/mucB/samB family C-terminal; IMS family HHH motif; impB/mucB/samB family YP_007591747.1 PFAM: UPF0126 domain YP_007591749.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007591751.1 PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase YP_007591752.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Biotin-requiring enzyme; TIGRFAM: dihydrolipoamide dehydrogenase YP_007591753.1 PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form YP_007591754.1 PFAM: ABC transporter YP_007591755.1 PFAM: Peptidase family M1 YP_007591757.1 manually curated YP_007591758.1 PFAM: Patatin-like phospholipase YP_007591761.1 PFAM: Mechanosensitive ion channel; Conserved TM helix YP_007591762.1 PFAM: Protein of unknown function (DUF2845) YP_007591764.1 PFAM: Bacterial protein of unknown function (DUF924) YP_007591765.1 PFAM: Domain of unknown function (DUF2383); TIGRFAM: conserved hypothetical protein YP_007591766.1 PFAM: Protein of unknown function (DUF2884) YP_007591767.1 PFAM: Gram-negative bacterial tonB protein; TC 2.C.1.1.1 YP_007591770.1 PFAM: Universal stress protein family YP_007591774.1 PFAM: LytTr DNA-binding domain YP_007591775.1 PFAM: Acyltransferase family YP_007591776.1 PFAM: Protein of unknown function (DUF3247) YP_007591777.1 PFAM: Amidinotransferase YP_007591778.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain YP_007591780.1 PFAM: Major Facilitator Superfamily YP_007591781.1 PFAM: Transketolase, thiamine diphosphate binding domain; TIGRFAM: pyruvate dehydrogenase E1 component, homodimeric type YP_007591782.1 PFAM: Malic enzyme, NAD binding domain; Phosphate acetyl/butaryl transferase; Malic enzyme, N-terminal domain YP_007591783.1 PFAM: Domain of unknown function (DUF1704); TIGRFAM: conserved hypothetical protein YP_007591784.1 PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A YP_007591785.1 PFAM: Aminotransferase class I and II YP_007591786.1 PFAM: GDSL-like Lipase/Acylhydrolase YP_007591788.1 PFAM: Glutaredoxin; Iron-sulphur cluster biosynthesis; Rhodanese-like domain; TIGRFAM: monothiol glutaredoxin, Grx4 family YP_007591789.1 PFAM: Aspartyl/Asparaginyl beta-hydroxylase YP_007591790.1 PFAM: Sulfotransferase domain; Tetratricopeptide repeat YP_007591791.1 PFAM: Sulfotransferase domain YP_007591792.1 PFAM: Sulfotransferase domain YP_007591793.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_007591794.1 PFAM: Phosphorylase superfamily; TIGRFAM: AMP nucleosidase, putative YP_007591795.1 PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: EDD domain protein, DegV family YP_007591796.1 PFAM: short chain dehydrogenase YP_007591798.1 PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type; signal peptide peptidase SppA, 67K type YP_007591799.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_007591800.1 PFAM: Protein of unknown function (DUF3667) YP_007591801.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: primosomal protein N' YP_007591802.1 PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC YP_007591803.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase TatB YP_007591804.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family YP_007591805.1 PFAM: Family of unknown function (DUF500) YP_007591806.1 PFAM: Ferrochelatase; TIGRFAM: ferrochelatase YP_007591808.1 PFAM: Peptidase family M49 YP_007591809.1 PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein YP_007591810.1 PFAM: Domain of unknown function (DUF1993) YP_007591812.1 PFAM: FAD dependent oxidoreductase YP_007591813.1 PFAM: DSBA-like thioredoxin domain YP_007591814.1 PFAM: EAL domain; GGDEF domain; GAF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_007591815.1 PFAM: DEAD/DEAH box helicase YP_007591816.1 PFAM: HutD YP_007591817.1 PFAM: NnrU protein YP_007591819.1 PFAM: Protein of unknown function (DUF938) YP_007591821.1 PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain YP_007591822.1 PFAM: Protein of unknown function (DUF833) YP_007591823.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase small subunit family protein, proteobacterial YP_007591824.1 PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II YP_007591825.1 PFAM: Peptidase family M23 YP_007591826.1 PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc) YP_007591827.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; alternative sigma factor RpoH YP_007591828.1 PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase YP_007591829.1 PFAM: Response regulator receiver domain YP_007591830.1 PFAM: Predicted permease YP_007591831.1 PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE YP_007591832.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_007591833.1 PFAM: Thioredoxin; TIGRFAM: thioredoxin YP_007591834.1 PFAM: Rho termination factor, N-terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; Rho termination factor, RNA-binding domain; TIGRFAM: transcription termination factor Rho YP_007591835.1 PFAM: Glutamate-cysteine ligase family 2(GCS2); TIGRFAM: glutamate--cysteine ligase, plant type YP_007591836.1 PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, homodimeric type YP_007591838.1 PFAM: Delta-aminolevulinic acid dehydratase YP_007591839.1 PFAM: Glucokinase; TIGRFAM: glucokinase, proteobacterial type YP_007591841.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E YP_007591843.1 PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain YP_007591844.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus YP_007591845.1 PFAM: Preprotein translocase subunit SecB; TIGRFAM: protein-export chaperone SecB YP_007591846.1 PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28 YP_007591847.1 PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type YP_007591848.1 PFAM: Fatty acid desaturase YP_007591849.1 PFAM: ABC transporter YP_007591851.1 PFAM: ABC-type uncharacterized transport system YP_007591853.1 PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg) YP_007591855.1 PFAM: Thymidine kinase YP_007591856.1 PFAM: FAD binding domain YP_007591857.1 PFAM: UvrD/REP helicase; TIGRFAM: ATP-dependent DNA helicase Rep YP_007591858.1 PFAM: Domain of unknown function DUF20 YP_007591859.1 PFAM: HAD superfamily, subfamily IIIB (Acid phosphatase); TIGRFAM: 5'-nucleotidase, lipoprotein e(P4) family YP_007591861.1 PFAM: Acyltransferase; TIGRFAM: glycerol-3-phosphate O-acyltransferase YP_007591862.1 PFAM: Amidohydrolase family YP_007591863.1 PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases YP_007591864.1 PFAM: Uncharacterized conserved protein (DUF2249) YP_007591866.1 PFAM: Cupin domain YP_007591867.1 PFAM: EamA-like transporter family YP_007591868.1 PFAM: AsnC family YP_007591869.1 PFAM: Phosphoesterase family; TIGRFAM: acid phosphatase, Burkholderia-type YP_007591870.1 TIGRFAM: proline iminopeptidase, Neisseria-type subfamily YP_007591871.1 PFAM: NAD dependent epimerase/dehydratase family YP_007591872.1 PFAM: Predicted integral membrane protein (DUF2269) YP_007591873.1 PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_007591874.1 PFAM: Leukotriene A4 hydrolase, C-terminal; Peptidase family M1 YP_007591876.1 PFAM: Fatty acid hydroxylase superfamily YP_007591877.1 PFAM: Protein of unknown function DUF45 YP_007591878.1 PFAM: Putative exonuclease, RdgC YP_007591879.1 PFAM: Aminotransferase class I and II YP_007591880.1 PFAM: PP-loop family YP_007591881.1 PFAM: Protein of unknown function (DUF465) YP_007591882.1 PFAM: Acetyltransferase (GNAT) family YP_007591883.1 PFAM: Phospholipase D Active site motif YP_007591885.1 PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16) YP_007591887.1 PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2 YP_007591888.1 PFAM: SCP-2 sterol transfer family YP_007591889.1 PFAM: ABC1 family; TIGRFAM: 2-polyprenylphenol 6-hydroxylase YP_007591890.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family YP_007591891.1 PFAM: RF-1 domain YP_007591892.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_007591893.1 PFAM: NAD dependent epimerase/dehydratase family YP_007591894.1 PFAM: Glycosyl transferase family 2 YP_007591896.1 PFAM: Polysaccharide deacetylase YP_007591897.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_007591898.1 PFAM: Malate synthase; TIGRFAM: malate synthase A YP_007591899.1 PFAM: Isocitrate lyase family; TIGRFAM: isocitrate lyase YP_007591900.1 PFAM: TrkA-N domain; Sodium/hydrogen exchanger family YP_007591901.1 PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein YP_007591902.1 PFAM: Protein of unknown function (DUF526) YP_007591903.1 PFAM: Nitrogen regulatory protein P-II YP_007591904.1 PFAM: Ribonucleotide reductase, all-alpha domain; ATP cone domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit YP_007591905.1 PFAM: GIY-YIG catalytic domain YP_007591906.1 PFAM: Ribonucleotide reductase, small chain YP_007591907.1 PFAM: TonB-dependent Receptor Plug Domain YP_007591908.1 PFAM: Penicillinase repressor YP_007591909.1 PFAM: BlaR1 peptidase M56 YP_007591910.1 PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region YP_007591911.1 PFAM: Glutathione S-transferase, N-terminal domain YP_007591912.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_007591913.1 PFAM: Aldo/keto reductase family YP_007591914.1 PFAM: GTP cyclohydrolase I; TIGRFAM: 7-cyano-7-deazaguanine reductase YP_007591916.1 PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Domain of unknown function (DUF3387); Type III restriction enzyme, res subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family YP_007591917.1 PFAM: Helix-turn-helix; TIGRFAM: addiction module antidote protein, HigA family YP_007591918.1 PFAM: Plasmid maintenance system killer protein YP_007591919.1 PFAM: Type I restriction modification DNA specificity domain YP_007591920.1 PFAM: M61 glycyl aminopeptidase YP_007591921.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_007591922.1 PFAM: Amino acid permease YP_007591923.1 PFAM: Fatty acid hydroxylase superfamily YP_007591924.1 PFAM: YhhN-like protein YP_007591925.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_007591926.1 PFAM: Glycerophosphoryl diester phosphodiesterase family YP_007591927.1 PFAM: Alkaline phosphatase YP_007591929.1 PFAM: Sulfatase YP_007591930.1 PFAM: 5'-nucleotidase, C-terminal domain; Calcineurin-like phosphoesterase; TIGRFAM: 2',3'-cyclic-nucleotide 2'-phosphodiesterase YP_007591931.1 PFAM: Adenylate and Guanylate cyclase catalytic domain YP_007591932.1 PFAM: Cyclic nucleotide-binding domain; Predicted nucleotide-binding protein containing TIR-like domain; manually curated YP_007591933.1 manually curated YP_007591934.1 PFAM: UbiA prenyltransferase family YP_007591935.1 PFAM: Methyltransferase domain; TIGRFAM: ubiquinone biosynthesis O-methyltransferase YP_007591936.1 PFAM: 3-dehydroquinate synthase YP_007591937.1 PFAM: S-Ribosylhomocysteinase (LuxS) YP_007591938.1 PFAM: Xylose isomerase-like TIM barrel YP_007591939.1 PFAM: Cytochrome c YP_007591940.1 PFAM: Cytochrome c YP_007591942.1 PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain YP_007591943.1 PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: homoserine kinase YP_007591944.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase YP_007591946.1 PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, bacterial type YP_007591947.1 PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group I YP_007591948.1 PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit YP_007591949.1 PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit YP_007591950.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase YP_007591951.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase YP_007591952.1 PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase YP_007591953.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type YP_007591954.1 PFAM: ACT domain; TIGRFAM: acetolactate synthase, small subunit YP_007591955.1 PFAM: C-terminal regulatory domain of Threonine dehydratase; Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine ammonia-lyase, biosynthetic, long form YP_007591956.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_007591957.1 PFAM: UbiA prenyltransferase family; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase, proteobacterial YP_007591959.1 PFAM: PspC domain YP_007591960.1 PFAM: Transcriptional regulator PadR-like family YP_007591961.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein YP_007591962.1 PFAM: Multicopper oxidase; Cytochrome c; TIGRFAM: nitrite reductase, copper-containing YP_007591963.1 PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthase YP_007591964.1 PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase YP_007591965.1 PFAM: Rhodanese-like domain YP_007591966.1 TIGRFAM: putative pimeloyl-BioC--CoA transferase BioH YP_007591967.1 PFAM: Methyltransferase domain; TIGRFAM: biotin biosynthesis protein BioC YP_007591970.1 PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I YP_007591971.1 PFAM: EamA-like transporter family YP_007591972.1 PFAM: Fatty acid hydroxylase superfamily YP_007591973.1 PFAM: Pyridoxal-phosphate dependent enzyme YP_007591974.1 PFAM: Aldose 1-epimerase YP_007591975.1 PFAM: Domain of unknown function (DUF3458); Peptidase family M1; TIGRFAM: aminopeptidase N, Escherichia coli type YP_007591977.1 PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A YP_007591978.1 PFAM: RDD family YP_007591979.1 PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain YP_007591980.1 PFAM: GDSL-like Lipase/Acylhydrolase; Autotransporter beta-domain YP_007591981.1 PFAM: Protein of unknown function (DUF1481) YP_007591982.1 PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase YP_007591983.1 PFAM: AMP-binding enzyme YP_007591984.1 PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein YP_007591985.1 PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial YP_007591986.1 PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA YP_007591987.1 PFAM: LysM domain YP_007591988.1 PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase YP_007591989.1 PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase YP_007591990.1 PFAM: NOL1/NOP2/sun family; NusB family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB YP_007591991.1 PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase YP_007591992.1 PFAM: O-Antigen ligase YP_007591993.1 PFAM: Glycosyl transferases group 1 YP_007591994.1 PFAM: Glycosyl transferase family 2 YP_007591995.1 PFAM: Glycosyl transferase family 2 YP_007591996.1 PFAM: NAD dependent epimerase/dehydratase family YP_007591997.1 PFAM: Glycosyl transferase family 2 YP_007591998.1 PFAM: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase YP_007592002.1 PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase YP_007592003.1 PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain YP_007592004.1 PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase YP_007592005.1 PFAM: Glutamine cyclotransferase YP_007592006.1 PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family; uncharacterized flavoprotein, PP_4765 family YP_007592007.1 PFAM: Bacterial pre-peptidase C-terminal domain; PKD domain YP_007592008.1 PFAM: Peptidase family M28 YP_007592010.1 PFAM: EAL domain; GGDEF domain; CHASE domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_007592011.1 PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); ATP-dependent helicase C-terminal; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpB YP_007592012.1 PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein; TIGRFAM: general secretion pathway protein D YP_007592014.1 PFAM: General secretion pathway protein M YP_007592015.1 PFAM: Fimbrial assembly protein (PilN) YP_007592016.1 PFAM: General secretion pathway protein K YP_007592017.1 TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_007592018.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_007592019.1 PFAM: Prokaryotic N-terminal methylation motif; Type II transport protein GspH; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; general secretion pathway protein H YP_007592020.1 PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain YP_007592021.1 PFAM: Bacterial type II secretion system protein F domain; TIGRFAM: general secretion pathway protein F YP_007592022.1 PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; TIGRFAM: general secretory pathway protein E YP_007592023.1 PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family YP_007592024.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase YP_007592026.1 PFAM: Protein of unknown function DUF88 YP_007592027.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase YP_007592028.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_007592030.1 PFAM: Aldo/keto reductase family YP_007592031.1 PFAM: TraB family YP_007592032.1 PFAM: Monomeric isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, monomeric type YP_007592033.1 PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; SWIM zinc finger YP_007592034.1 PFAM: Helix-turn-helix YP_007592037.1 PFAM: LysM domain YP_007592038.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family YP_007592039.1 PFAM: AcrB/AcrD/AcrF family YP_007592040.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_007592041.1 PFAM: Cytochrome c YP_007592042.1 PFAM: Protein of unknown function, DUF479 YP_007592044.1 PFAM: AFG1-like ATPase YP_007592045.1 PFAM: EAL domain; GGDEF domain YP_007592047.1 PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphoglycerate mutase, BPG-dependent, family 1 YP_007592049.1 PFAM: Coproporphyrinogen III oxidase YP_007592051.1 PFAM: DUF218 domain YP_007592052.1 PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain YP_007592053.1 PFAM: Beta-ketoacyl synthase, N-terminal domain YP_007592054.1 PFAM: Glycosyl transferase family 2 YP_007592056.1 PFAM: short chain dehydrogenase YP_007592058.1 PFAM: MMPL family YP_007592060.1 PFAM: Bacterial lipid A biosynthesis acyltransferase YP_007592061.1 PFAM: FabA-like domain YP_007592063.1 PFAM: Phosphopantetheine attachment site YP_007592065.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase YP_007592067.1 PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; ATP synthase, Delta/Epsilon chain, long alpha-helix domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria) YP_007592068.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain; TIGRFAM: ATP synthase, F1 beta subunit YP_007592069.1 PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit YP_007592070.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit YP_007592071.1 PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit YP_007592072.1 PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b YP_007592073.1 PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c YP_007592074.1 PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) YP_007592075.1 PFAM: ATP synthase I chain YP_007592076.1 PFAM: Phasin protein YP_007592077.1 PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein YP_007592078.1 PFAM: MerR, DNA binding; MerR family regulatory protein; TIGRFAM: Hg(II)-responsive transcriptional regulator YP_007592079.1 PFAM: MerT mercuric transport protein YP_007592080.1 PFAM: Heavy-metal-associated domain; TIGRFAM: mercuric transport protein periplasmic component YP_007592081.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Heavy-metal-associated domain; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: mercuric reductase YP_007592082.1 PFAM: MerC mercury resistance protein YP_007592083.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YP_007592084.1 PFAM: MerR, DNA binding; MerR family regulatory protein YP_007592085.1 PFAM: Glutaredoxin YP_007592087.1 PFAM: Heavy-metal-associated domain YP_007592088.1 PFAM: NHL repeat YP_007592089.1 PFAM: Fatty acid hydroxylase superfamily YP_007592091.1 PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase AhpD family core domain YP_007592092.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase; 2-haloalkanoic acid dehalogenase, type II YP_007592094.1 PFAM: EthD protein; TIGRFAM: conserved hypothetical protein YP_007592095.1 PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase AhpD family core domain YP_007592098.1 PFAM: Domain of unknown function (DUF427) YP_007592099.1 PFAM: Patatin-like phospholipase YP_007592102.1 PFAM: Predicted integral membrane protein (DUF2282) YP_007592103.1 PFAM: Protein of unknown function (DUF692) YP_007592104.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2063) YP_007592105.1 PFAM: DoxX YP_007592106.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007592107.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; SNARE associated Golgi protein YP_007592108.1 PFAM: Radical SAM superfamily; Protein of unknown function (DUF3641); TIGRFAM: radical SAM/Cys-rich domain protein YP_007592109.1 PFAM: Methyltransferase domain YP_007592110.1 PFAM: Glycosyl transferase family 2 YP_007592111.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2064) YP_007592112.1 PFAM: Phosphate transporter family YP_007592113.1 PFAM: NUDIX domain YP_007592114.1 PFAM: BFD-like [2Fe-2S] binding domain YP_007592115.1 PFAM: Ferritin-like domain; TIGRFAM: bacterioferritin YP_007592117.1 PFAM: Protein of unknown function, DUF583 YP_007592118.1 PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein YP_007592119.1 PFAM: NADH pyrophosphatase zinc ribbon domain; NUDIX domain; NADH pyrophosphatase-like rudimentary NUDIX domain YP_007592121.1 PFAM: CobD/Cbib protein YP_007592122.1 PFAM: Acyltransferase; Major Facilitator Superfamily; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_007592123.1 PFAM: TonB-dependent Receptor Plug Domain YP_007592125.1 PFAM: Glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit YP_007592126.1 PFAM: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, alpha subunit YP_007592127.1 PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain YP_007592128.1 PFAM: Glutamine amidotransferase class-I YP_007592129.1 PFAM: Rhomboid family; manually curated YP_007592130.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase YP_007592131.1 PFAM: Opacity-associated protein A LysM-like domain; Peptidase family M23 YP_007592132.1 PFAM: Uncharacterised protein family (UPF0075) YP_007592134.1 PFAM: Major Facilitator Superfamily YP_007592135.1 PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth) YP_007592136.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase YP_007592138.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YP_007592139.1 PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) YP_007592140.1 PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic YP_007592141.1 PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc YP_007592142.1 PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase YP_007592143.1 PFAM: Sporulation related domain YP_007592144.1 PFAM: short chain dehydrogenase YP_007592145.1 PFAM: short chain dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase YP_007592146.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: arginine decarboxylase, biosynthetic YP_007592147.1 PFAM: Spermine/spermidine synthase; TIGRFAM: spermidine synthase YP_007592150.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_007592151.1 PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphohistidine phosphatase SixA YP_007592153.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_007592154.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_007592156.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_007592157.1 PFAM: Acetyltransferase (GNAT) family YP_007592158.1 PFAM: Glycosyltransferase family 36; Uncharacterized protein conserved in bacteria (DUF2329); Putative carbohydrate binding domain; Glycosyltransferase 36 associated family YP_007592159.1 PFAM: SseB protein YP_007592160.1 manually curated YP_007592162.1 PFAM: Helix-turn-helix YP_007592163.1 PFAM: N-6 DNA Methylase; HsdM N-terminal domain YP_007592164.1 PFAM: Type I restriction modification DNA specificity domain; manually curated YP_007592165.1 manually curated YP_007592168.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_007592170.1 PFAM: Nucleotidyltransferase domain YP_007592172.1 PFAM: Domain of unknown function (DUF955) YP_007592173.1 PFAM: Domain of unknown function (DUF3387); Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family YP_007592175.1 manually curated YP_007592178.1 PFAM: Phage integrase family; TIGRFAM: integron integrase YP_007592180.1 manually curated YP_007592181.1 manually curated YP_007592182.1 manually curated YP_007592183.1 PFAM: Domain of unknown function (DUF1851); manually curated YP_007592184.1 manually curated YP_007592185.1 PFAM: Transposase DDE domain; Transposase domain (DUF772) YP_007592186.1 manually curated YP_007592187.1 manually curated YP_007592189.1 PFAM: Cupin domain YP_007592190.1 PFAM: Acetyltransferase (GNAT) family YP_007592191.1 PFAM: Glucose-6-phosphate dehydrogenase, NAD binding domain; Glucose-6-phosphate dehydrogenase, C-terminal domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase YP_007592193.1 PFAM: Transaldolase; TIGRFAM: transaldolase, mycobacterial type YP_007592194.1 PFAM: Phosphoglucose isomerase YP_007592195.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific YP_007592196.1 PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast YP_007592198.1 PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase YP_007592199.1 PFAM: Protein of unknown function, DUF481 YP_007592201.1 PFAM: HTH domain YP_007592202.1 PFAM: Patatin-like phospholipase YP_007592203.1 PFAM: Protein of unknown function, DUF488 YP_007592204.1 PFAM: Glycosyl transferase family 2 YP_007592205.1 PFAM: ParB-like nuclease domain; KorB domain; TIGRFAM: ParB-like partition proteins YP_007592206.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_007592207.1 PFAM: ABC transporter; TOBE domain YP_007592208.1 PFAM: Glycosyl hydrolase family 1; TIGRFAM: beta-galactosidase YP_007592209.1 PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB YP_007592210.1 PFAM: SPFH domain / Band 7 family YP_007592211.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_007592212.1 PFAM: TonB-dependent Receptor Plug Domain YP_007592213.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2329) YP_007592214.1 PFAM: Bacterial extracellular solute-binding protein YP_007592215.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007592216.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007592217.1 PFAM: Pirin C-terminal cupin domain; Pirin YP_007592219.1 PFAM: Uncharacterised protein family (UPF0149); TIGRFAM: yecA family protein YP_007592220.1 PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth) YP_007592221.1 PFAM: 'Cold-shock' DNA-binding domain YP_007592222.1 PFAM: Peptidase family M3 YP_007592223.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_007592225.1 PFAM: Uncharacterised protein family (UPF0153); manually curated YP_007592226.1 PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase YP_007592228.1 PFAM: RimK-like ATP-grasp domain YP_007592229.1 PFAM: Acetyltransferase (GNAT) family YP_007592230.1 PFAM: GHMP kinases N terminal domain; TIGRFAM: diphosphomevalonate decarboxylase YP_007592231.1 PFAM: GHMP kinases N terminal domain YP_007592232.1 PFAM: GHMP kinases C terminal; Hydroxymethylglutaryl-coenzyme A reductase; GHMP kinases N terminal domain; TIGRFAM: mevalonate kinase; hydroxymethylglutaryl-CoA reductase, degradative YP_007592233.1 PFAM: NUDIX domain; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1 YP_007592236.1 PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase YP_007592237.1 PFAM: Protein of unknown function, DUF484 YP_007592238.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerC YP_007592239.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase) YP_007592240.1 PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit YP_007592241.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit YP_007592243.1 PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase YP_007592244.1 PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: small GTP-binding protein domain; tRNA modification GTPase TrmE YP_007592245.1 PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain YP_007592246.1 PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial; manually curated YP_007592247.1 PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; IMG reference gene:2506718234_SP