-- dump date 20140620_022855 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 741091000001 SEQ_END SEQ_END NC_015061.1 4864217 4864217 DR NC_015061.1; contig end 4864217..4864217 Rahnella sp. Y9602 741091000002 SEQ_END SEQ_END NC_015062.1 616549 616549 DR NC_015062.1; contig end 616549..616549 Rahnella sp. Y9602 741091000003 SEQ_END SEQ_END NC_015063.1 133486 133486 DR NC_015063.1; contig end 133486..133486 Rahnella sp. Y9602 YP_004210761.1 CDS Rahaq_0001 NC_015061.1 55 1446 D TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: spe:Spro_0032 chromosomal replication initiation protein; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase; chromosomal replication initiator protein DnaA 55..1446 Rahnella sp. Y9602 10215501 YP_004210762.1 CDS Rahaq_0002 NC_015061.1 1451 2551 D SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III, subunit beta; KEGG: spe:Spro_0033 DNA polymerase III subunit beta; PFAM: DNA polymerase III beta chain; DNA polymerase III subunit beta 1451..2551 Rahnella sp. Y9602 10210961 YP_004210763.1 CDS Rahaq_0003 NC_015061.1 2679 3767 D KEGG: spe:Spro_0034 recombination protein F; TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; DNA replication and repair protein RecF 2679..3767 Rahnella sp. Y9602 10210962 YP_004210764.1 CDS Rahaq_0004 NC_015061.1 3787 6201 D SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA gyrase, B subunit; KEGG: spe:Spro_0035 DNA gyrase subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain-containing protein; DNA gyrase subunit B domain protein; DNA gyrase subunit B 3787..6201 Rahnella sp. Y9602 10210963 YP_004210765.1 CDS Rahaq_0005 NC_015061.1 6345 7160 D KEGG: pwa:Pecwa_0012 sugar phosphatase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase 6345..7160 Rahnella sp. Y9602 10210964 YP_004210766.1 CDS Rahaq_0006 NC_015061.1 7187 8449 D KEGG: spe:Spro_0046 hypothetical protein; hypothetical protein 7187..8449 Rahnella sp. Y9602 10210965 YP_004210767.1 CDS Rahaq_0007 NC_015061.1 8492 8869 R PFAM: protein of unknown function DUF1375; KEGG: pct:PC1_0033 hypothetical protein; hypothetical protein complement(8492..8869) Rahnella sp. Y9602 10210966 YP_004210768.1 CDS Rahaq_0008 NC_015061.1 9249 9659 D PFAM: heat shock protein Hsp20; KEGG: ctu:Ctu_00530 heat shock protein IbpA; heat shock protein Hsp20 9249..9659 Rahnella sp. Y9602 10210967 YP_004210769.1 CDS Rahaq_0009 NC_015061.1 9661 9756 R hypothetical protein complement(9661..9756) Rahnella sp. Y9602 10210968 YP_004210770.1 CDS Rahaq_0010 NC_015061.1 9789 10223 D PFAM: heat shock protein Hsp20; KEGG: eca:ECA4402 heat shock chaperone IbpB; heat shock protein Hsp20 9789..10223 Rahnella sp. Y9602 10210969 YP_004210771.1 CDS Rahaq_0011 NC_015061.1 10402 11157 R KEGG: mpn:MPN083 hypothetical protein; hypothetical protein complement(10402..11157) Rahnella sp. Y9602 10210970 YP_004210772.1 CDS Rahaq_0012 NC_015061.1 11516 12766 R PFAM: aminotransferase class I and II; KEGG: ypi:YpsIP31758_4140 valine--pyruvate transaminase; class I and II aminotransferase complement(11516..12766) Rahnella sp. Y9602 10210971 YP_004210773.1 CDS Rahaq_0013 NC_015061.1 13018 14229 D KEGG: hde:HDEF_1127 hypothetical protein; hypothetical protein 13018..14229 Rahnella sp. Y9602 10210972 YP_004210774.1 CDS Rahaq_0014 NC_015061.1 14297 15274 R KEGG: yen:YE4159 D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; gluconate 2-dehydrogenase complement(14297..15274) Rahnella sp. Y9602 10210973 YP_004210775.1 CDS Rahaq_0015 NC_015061.1 15271 16563 R PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_0058 major facilitator transporter; major facilitator superfamily protein complement(15271..16563) Rahnella sp. Y9602 10210974 YP_004210776.1 CDS Rahaq_0016 NC_015061.1 16607 17356 R PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: spe:Spro_0060 xylose isomerase domain-containing protein; xylose isomerase domain-containing protein TIM barrel complement(16607..17356) Rahnella sp. Y9602 10210975 YP_004210777.1 CDS Rahaq_0017 NC_015061.1 17570 18604 R KEGG: spe:Spro_0061 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator complement(17570..18604) Rahnella sp. Y9602 10210976 YP_004210778.1 CDS Rahaq_0018 NC_015061.1 18672 19958 R TIGRFAM: oligosaccharide/H+ symporter, major facilitator superfamily (MFS); KEGG: ent:Ent638_4076 galactoside permease; oligosaccharide/H+ symporter, major facilitator superfamily (MFS) complement(18672..19958) Rahnella sp. Y9602 10210977 YP_004210779.1 CDS Rahaq_0019 NC_015061.1 20017 22143 R KEGG: ddc:Dd586_2554 glycoside hydrolase clan GH-D; PFAM: glycoside hydrolase clan GH-D; alpha-galactosidase complement(20017..22143) Rahnella sp. Y9602 10210978 YP_004210780.1 CDS Rahaq_0020 NC_015061.1 22284 23324 R KEGG: ent:Ent638_4078 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator complement(22284..23324) Rahnella sp. Y9602 10210979 YP_004210781.1 CDS Rahaq_0021 NC_015061.1 23395 24057 R PFAM: OmpA/MotB domain protein; KEGG: spe:Spro_0062 outer membrane lipoprotein; OmpA/MotB domain-containing protein complement(23395..24057) Rahnella sp. Y9602 10210980 YP_004210782.1 CDS Rahaq_0022 NC_015061.1 24279 24722 R PFAM: GCN5-related N-acetyltransferase; KEGG: ypz:YPZ3_3495 acetyltransferase; N-acetyltransferase GCN5 complement(24279..24722) Rahnella sp. Y9602 10210981 YP_004210783.1 CDS Rahaq_0023 NC_015061.1 24719 25291 R TIGRFAM: DNA-3-methyladenine glycosylase I; KEGG: ypb:YPTS_4132 DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I complement(24719..25291) Rahnella sp. Y9602 10210982 YP_004210784.1 CDS Rahaq_0024 NC_015061.1 25483 27489 D KEGG: spe:Spro_0065 outer membrane autotransporter; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; lipolytic protein G-D-S-L family; outer membrane autotransporter barrel domain-containing protein 25483..27489 Rahnella sp. Y9602 10210983 YP_004210785.1 CDS Rahaq_0025 NC_015061.1 27568 27816 D KEGG: sea:SeAg_B1618 stability protein StbD; stability protein StbD 27568..27816 Rahnella sp. Y9602 10210984 YP_004210786.1 CDS Rahaq_0026 NC_015061.1 27806 28090 D KEGG: eic:NT01EI_2009 stability protein StbE; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; RelE/StbE family addiction module toxin 27806..28090 Rahnella sp. Y9602 10210985 YP_004210787.1 CDS Rahaq_0027 NC_015061.1 28128 29126 D TIGRFAM: glycyl-tRNA synthetase, subunit alpha; KEGG: eam:EAMY_3633 glycine tRNA synthetase, subunit alpha; PFAM: glycyl-tRNA synthetase subunit alpha; glycyl-tRNA synthetase subunit alpha 28128..29126 Rahnella sp. Y9602 10210986 YP_004210788.1 CDS Rahaq_0028 NC_015061.1 29136 31205 D TIGRFAM: glycyl-tRNA synthetase, subunit beta; KEGG: yen:YE4150 glycyl-tRNA synthetase subunit beta; glycyl-tRNA synthetase subunit beta 29136..31205 Rahnella sp. Y9602 10210987 YP_004210789.1 CDS Rahaq_0029 NC_015061.1 31416 32138 D KEGG: spe:Spro_0071 hypothetical protein; hypothetical protein 31416..32138 Rahnella sp. Y9602 10210988 YP_004210790.1 CDS Rahaq_0030 NC_015061.1 32316 33110 D PFAM: DSBA oxidoreductase; KEGG: ypp:YPDSF_4128 hypothetical protein; DSBA oxidoreductase 32316..33110 Rahnella sp. Y9602 10210989 YP_004210791.1 CDS Rahaq_0031 NC_015061.1 33345 33524 D hypothetical protein 33345..33524 Rahnella sp. Y9602 10210990 YP_004210792.1 CDS Rahaq_0032 NC_015061.1 33555 35099 D PFAM: CMP/dCMP deaminase zinc-binding; KEGG: vcj:VCD_000629 deoxycytidylate deaminase-related protein; CMP/dCMP deaminase zinc-binding protein 33555..35099 Rahnella sp. Y9602 10210991 YP_004210793.1 CDS Rahaq_0033 NC_015061.1 35587 37500 D KEGG: spe:Spro_0072 PTS system mannitol-specific transporter subunit IIC; TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphotransferase system EIIC; phosphotransferase system lactose/cellobiose-specific IIB subunit; PTS system mannitol-specific transporter subunit IIC 35587..37500 Rahnella sp. Y9602 10210992 YP_004210794.1 CDS Rahaq_0034 NC_015061.1 37635 38783 D PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: spe:Spro_0073 mannitol-1-phosphate 5-dehydrogenase; mannitol dehydrogenase 37635..38783 Rahnella sp. Y9602 10210993 YP_004210795.1 CDS Rahaq_0035 NC_015061.1 38734 39468 D PFAM: Mannitol repressor; KEGG: spe:Spro_0074 mannitol repressor protein; mannitol repressor, MtlR 38734..39468 Rahnella sp. Y9602 10210994 YP_004210796.1 CDS Rahaq_0036 NC_015061.1 39494 39649 D KEGG: dze:Dd1591_1426 hypothetical protein; hypothetical protein 39494..39649 Rahnella sp. Y9602 10210995 YP_004210797.1 CDS Rahaq_0037 NC_015061.1 39599 40207 R PFAM: lysine exporter protein (LYSE/YGGA); KEGG: yen:YE4145 inner membrane protein; lysine exporter protein LysE/YggA complement(39599..40207) Rahnella sp. Y9602 10210996 YP_004210798.1 CDS Rahaq_0038 NC_015061.1 40352 41851 D KEGG: spe:Spro_0076 transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 40352..41851 Rahnella sp. Y9602 10210997 YP_004210799.1 CDS Rahaq_0039 NC_015061.1 41917 42276 D KEGG: yen:YE4143 hypothetical protein; hypothetical protein 41917..42276 Rahnella sp. Y9602 10210998 YP_004210800.1 CDS Rahaq_0040 NC_015061.1 42448 43119 R PFAM: MOSC domain containing protein; 3-alpha domain protein; KEGG: spe:Spro_0079 hypothetical protein; MOSC domain-containing protein complement(42448..43119) Rahnella sp. Y9602 10210999 YP_004210801.1 CDS Rahaq_0041 NC_015061.1 43223 45169 R KEGG: spe:Spro_0080 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer complement(43223..45169) Rahnella sp. Y9602 10211000 YP_004210802.1 CDS Rahaq_0042 NC_015061.1 45441 46061 R PFAM: Manganese/iron superoxide dismutase-like; KEGG: dda:Dd703_0072 superoxide dismutase; manganese/iron superoxide dismutase-like protein complement(45441..46061) Rahnella sp. Y9602 10211001 YP_004210803.1 CDS Rahaq_0043 NC_015061.1 46272 47114 R KEGG: ypy:YPK_0036 formate dehydrogenase accessory protein; TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; formate dehydrogenase family accessory protein FdhD complement(46272..47114) Rahnella sp. Y9602 10211002 YP_004210804.1 CDS Rahaq_0044 NC_015061.1 47260 50307 D KEGG: pay:PAU_00744 FdnG, subunit alpha of formate dehydrogenase-N; TIGRFAM: formate dehydrogenase, subunit alpha; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; formate dehydrogenase subunit alpha 47260..50307 Rahnella sp. Y9602 10211003 YP_004210805.1 CDS Rahaq_0045 NC_015061.1 50320 51231 D KEGG: spe:Spro_0085 formate dehydrogenase subunit beta; TIGRFAM: formate dehydrogenase, subunit beta; PFAM: Formate dehydrogenase transmembrane domain protein; formate dehydrogenase subunit beta 50320..51231 Rahnella sp. Y9602 10211004 YP_004210806.1 CDS Rahaq_0046 NC_015061.1 51228 51881 D TIGRFAM: formate dehydrogenase, subunit gamma; KEGG: ypy:YPK_0040 formate dehydrogenase-O subunit gamma; formate dehydrogenase subunit gamma 51228..51881 Rahnella sp. Y9602 10211005 YP_004210807.1 CDS Rahaq_0047 NC_015061.1 51878 52783 D KEGG: ypb:YPTS_4153 formate dehydrogenase accessory protein FdhE; TIGRFAM: formate dehydrogenase accessory protein FdhE; PFAM: formate dehydrogenase accessory protein; formate dehydrogenase accessory protein FdhE 51878..52783 Rahnella sp. Y9602 10211006 YP_004210808.1 CDS Rahaq_0048 NC_015061.1 52869 53510 D PFAM: Glutathione S-transferase domain; KEGG: spe:Spro_0089 glutathione S-transferase; glutathione S-transferase 52869..53510 Rahnella sp. Y9602 10211007 YP_004210809.1 CDS Rahaq_0049 NC_015061.1 53612 55150 D PFAM: Aldehyde Dehydrogenase; KEGG: ect:ECIAI39_4105 aldehyde dehydrogenase B; aldehyde dehydrogenase 53612..55150 Rahnella sp. Y9602 10211008 YP_004210810.1 CDS Rahaq_0050 NC_015061.1 55280 56518 R KEGG: spe:Spro_0092 major facilitator transporter; manually curated; PFAM: major facilitator superfamily MFS_1; major facilitator superfamily protein complement(55280..56518) Rahnella sp. Y9602 10211009 YP_004210811.1 CDS Rahaq_0051 NC_015061.1 56754 57749 D KEGG: ypy:YPK_0050 acyltransferase 3; acyltransferase 56754..57749 Rahnella sp. Y9602 10211010 YP_004210812.1 CDS Rahaq_0052 NC_015061.1 57781 58455 D KEGG: vsp:VS_0293 hypothetical protein; hypothetical protein 57781..58455 Rahnella sp. Y9602 10211011 YP_004210813.1 CDS Rahaq_0053 NC_015061.1 58654 59568 R KEGG: yen:YE4125 transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain-containing protein; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(58654..59568) Rahnella sp. Y9602 10211012 YP_004210814.1 CDS Rahaq_0054 NC_015061.1 59604 60158 R PFAM: isochorismatase hydrolase; KEGG: yen:YE4124 isochorismatase family hydrolase; isochorismatase hydrolase complement(59604..60158) Rahnella sp. Y9602 10211013 YP_004210815.1 CDS Rahaq_0055 NC_015061.1 60290 60886 R PFAM: ThiJ/PfpI domain-containing protein; KEGG: eca:ECA0102 hypothetical protein; ThiJ/PfpI domain-containing protein complement(60290..60886) Rahnella sp. Y9602 10211014 YP_004210816.1 CDS Rahaq_0056 NC_015061.1 60974 62005 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: dda:Dd703_0221 L-idonate 5-dehydrogenase; alcohol dehydrogenase complement(60974..62005) Rahnella sp. Y9602 10211015 YP_004210817.1 CDS Rahaq_0057 NC_015061.1 62128 63330 R KEGG: yen:YE1971 membrane transporter; TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; benzoate transporter complement(62128..63330) Rahnella sp. Y9602 10211016 YP_004210818.1 CDS Rahaq_0058 NC_015061.1 63469 64035 D KEGG: yen:YE1970 DNA-binding protein; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 63469..64035 Rahnella sp. Y9602 10211017 YP_004210819.1 CDS Rahaq_0059 NC_015061.1 64064 64516 D PFAM: GCN5-related N-acetyltransferase; KEGG: sgl:SG1755 acetyltransferase; N-acetyltransferase GCN5 64064..64516 Rahnella sp. Y9602 10211018 YP_004210820.1 CDS Rahaq_0060 NC_015061.1 64500 64982 R PFAM: GCN5-related N-acetyltransferase; KEGG: mmw:Mmwyl1_1878 GCN5-like N-acetyltransferase; N-acetyltransferase GCN5 complement(64500..64982) Rahnella sp. Y9602 10211019 YP_004210821.1 CDS Rahaq_0061 NC_015061.1 64997 65536 R KEGG: mea:Mex_1p4102 ABC transporter periplasmic protein; hypothetical protein complement(64997..65536) Rahnella sp. Y9602 10211020 YP_004210822.1 CDS Rahaq_0062 NC_015061.1 65709 66338 D PFAM: Glutathione S-transferase domain; KEGG: yen:YE1848 transferase; glutathione S-transferase 65709..66338 Rahnella sp. Y9602 10211021 YP_004210823.1 CDS Rahaq_0063 NC_015061.1 66330 66776 R PFAM: GCN5-related N-acetyltransferase; KEGG: hch:HCH_01386 histone acetyltransferase HPA2-like acetyltransferase; N-acetyltransferase GCN5 complement(66330..66776) Rahnella sp. Y9602 10211022 YP_004210824.1 CDS Rahaq_0064 NC_015061.1 66796 67431 R PFAM: lysine exporter protein (LYSE/YGGA); KEGG: pct:PC1_4180 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA complement(66796..67431) Rahnella sp. Y9602 10211023 YP_004210825.1 CDS Rahaq_0065 NC_015061.1 67590 67847 R PFAM: protein of unknown function DUF1471; KEGG: spe:Spro_4435 hypothetical protein; hypothetical protein complement(67590..67847) Rahnella sp. Y9602 10211024 YP_004210826.1 CDS Rahaq_0066 NC_015061.1 68251 68499 D PFAM: Transglycosylase-associated protein; KEGG: spe:Spro_3521 hypothetical protein; transglycosylase 68251..68499 Rahnella sp. Y9602 10211025 YP_004210827.1 CDS Rahaq_0067 NC_015061.1 68563 68946 R KEGG: pfl:PFL_2492 hypothetical protein; hypothetical protein complement(68563..68946) Rahnella sp. Y9602 10211026 YP_004210828.1 CDS Rahaq_0068 NC_015061.1 68946 69362 R KEGG: afr:AFE_0010 hypothetical protein; hypothetical protein complement(68946..69362) Rahnella sp. Y9602 10211027 YP_004210829.1 CDS Rahaq_0069 NC_015061.1 69596 70294 R TIGRFAM: urea ABC transporter ATP-binding protein UrtE; PFAM: ABC transporter related; KEGG: ebi:EbC_06330 ABC transporter subunit, ATP-binding subunit; SMART: AAA ATPase; urea ABC transporter ATP-binding protein complement(69596..70294) Rahnella sp. Y9602 10211028 YP_004210830.1 CDS Rahaq_0070 NC_015061.1 70306 71103 R KEGG: spe:Spro_1424 ABC transporter-related protein; TIGRFAM: urea ABC transporter ATP-binding protein UrtD; PFAM: ABC transporter related; urea ABC transporter ATP-binding protein complement(70306..71103) Rahnella sp. Y9602 10211029 YP_004210831.1 CDS Rahaq_0071 NC_015061.1 71103 72176 R KEGG: spe:Spro_1423 inner-membrane translocator; TIGRFAM: urea ABC transporter permease protein UrtC; PFAM: inner-membrane translocator; urea ABC transporter permease complement(71103..72176) Rahnella sp. Y9602 10211030 YP_004210832.1 CDS Rahaq_0072 NC_015061.1 72176 73744 R KEGG: spe:Spro_1422 inner-membrane translocator; TIGRFAM: urea ABC transporter permease protein UrtB; PFAM: inner-membrane translocator; urea ABC transporter permease complement(72176..73744) Rahnella sp. Y9602 10211031 YP_004210833.1 CDS Rahaq_0073 NC_015061.1 73885 75153 R KEGG: ebi:EbC_06370 ABC transporter subunit, substrate-binding (UrtA-like); TIGRFAM: urea ABC transporter urea binding protein; PFAM: Extracellular ligand-binding receptor; urea ABC transporter substrate-binding protein complement(73885..75153) Rahnella sp. Y9602 10211032 YP_004210834.1 CDS Rahaq_0074 NC_015061.1 75223 75945 R KEGG: spe:Spro_1420 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(75223..75945) Rahnella sp. Y9602 10211033 YP_004210835.1 CDS Rahaq_0075 NC_015061.1 75974 79603 R TIGRFAM: urea carboxylase; urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; Allophanate hydrolase subunit 1; biotin/lipoyl attachment domain-containing protein; KEGG: spe:Spro_1419 UreA carboxylase; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; urea carboxylase complement(75974..79603) Rahnella sp. Y9602 10211034 YP_004210836.1 CDS Rahaq_0076 NC_015061.1 79613 81463 R KEGG: spe:Spro_1418 allophanate hydrolase; TIGRFAM: allophanate hydrolase; PFAM: Amidase; allophanate hydrolase complement(79613..81463) Rahnella sp. Y9602 10211035 YP_004210837.1 CDS Rahaq_0077 NC_015061.1 81734 82195 D KEGG: ecm:EcSMS35_0821 RelB/DinJ family addiction module antitoxin; RelB/DinJ family addiction module antitoxin 81734..82195 Rahnella sp. Y9602 10211036 YP_004210838.1 CDS Rahaq_0078 NC_015061.1 82199 82492 D KEGG: rpi:Rpic_3179 addiction module toxin, RelE/StbE family; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; RelE/StbE family addiction module toxin 82199..82492 Rahnella sp. Y9602 10211037 YP_004210839.1 CDS Rahaq_0079 NC_015061.1 82492 83937 D KEGG: spe:Spro_0124 hypothetical protein; hypothetical protein 82492..83937 Rahnella sp. Y9602 10211038 YP_004210840.1 CDS Rahaq_0080 NC_015061.1 84008 84466 D KEGG: spe:Spro_0129 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator 84008..84466 Rahnella sp. Y9602 10211039 YP_004210841.1 CDS Rahaq_0081 NC_015061.1 84601 85023 D KEGG: spe:Spro_0130 OsmC family protein; TIGRFAM: peroxiredoxin, Ohr subfamily; PFAM: OsmC family protein; Ohr subfamily peroxiredoxin 84601..85023 Rahnella sp. Y9602 10211040 YP_004210842.1 CDS Rahaq_0082 NC_015061.1 85295 86974 D PFAM: sulfatase; protein of unknown function DUF1705; KEGG: spe:Spro_0131 phosphoethanolamine transferase; sulfatase 85295..86974 Rahnella sp. Y9602 10211041 YP_004210843.1 CDS Rahaq_0083 NC_015061.1 87418 87894 R KEGG: psa:PST_3459 hypothetical protein; hypothetical protein complement(87418..87894) Rahnella sp. Y9602 10211043 YP_004210844.1 CDS Rahaq_0084 NC_015061.1 87901 88245 R KEGG: amc:MADE_03514 HtaR suppressor protein; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein; AbrB family transcriptional regulator complement(87901..88245) Rahnella sp. Y9602 10211044 YP_004210845.1 CDS Rahaq_0086 NC_015061.1 88629 90008 R PFAM: MmgE/PrpD family protein; KEGG: ebi:EbC_07520 MmgE/PrpD family protein; MmgE/PrpD family protein complement(88629..90008) Rahnella sp. Y9602 10211046 YP_004210846.1 CDS Rahaq_0087 NC_015061.1 90028 90807 R KEGG: ebi:EbC_07530 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(90028..90807) Rahnella sp. Y9602 10211047 YP_004210847.1 CDS Rahaq_0088 NC_015061.1 90807 91673 R KEGG: ebi:EbC_07540 oligopeptide transport ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(90807..91673) Rahnella sp. Y9602 10211048 YP_004210848.1 CDS Rahaq_0089 NC_015061.1 91666 92601 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_07550 ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein complement(91666..92601) Rahnella sp. Y9602 10211049 YP_004210849.1 CDS Rahaq_0090 NC_015061.1 92598 93683 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_07560 ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein complement(92598..93683) Rahnella sp. Y9602 10211050 YP_004210850.1 CDS Rahaq_0091 NC_015061.1 93713 95311 R PFAM: extracellular solute-binding protein family 5; KEGG: ebi:EbC_07570 ABC transporter periplasmic oligopeptide-binding protein; family 5 extracellular solute-binding protein complement(93713..95311) Rahnella sp. Y9602 10211051 YP_004210851.1 CDS Rahaq_0092 NC_015061.1 95545 96984 R KEGG: ebi:EbC_07580 aminobenzoyl-glutamate utilization family protein; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase complement(95545..96984) Rahnella sp. Y9602 10211052 YP_004210852.1 CDS Rahaq_0093 NC_015061.1 97242 98168 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ebi:EbC_07590 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(97242..98168) Rahnella sp. Y9602 10211053 YP_004210853.1 CDS Rahaq_0094 NC_015061.1 98897 100504 D PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE4083 periplasmic dipeptide transport protein; family 5 extracellular solute-binding protein 98897..100504 Rahnella sp. Y9602 10211054 YP_004210854.1 CDS Rahaq_0095 NC_015061.1 100705 101724 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE4082 dipeptide transporter permease DppB; binding-protein-dependent transport system inner membrane protein 100705..101724 Rahnella sp. Y9602 10211055 YP_004210855.1 CDS Rahaq_0096 NC_015061.1 101735 102649 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pct:PC1_0046 dipeptide transporter; binding-protein-dependent transport system inner membrane protein 101735..102649 Rahnella sp. Y9602 10211056 YP_004210856.1 CDS Rahaq_0097 NC_015061.1 102660 103685 D TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: kpu:KP1_5242 dipeptide transporter ATP-binding subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 102660..103685 Rahnella sp. Y9602 10211057 YP_004210857.1 CDS Rahaq_0098 NC_015061.1 103675 104697 D TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: esa:ESA_04197 dipeptide transporter ATP-binding subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 103675..104697 Rahnella sp. Y9602 10211058 YP_004210858.1 CDS Rahaq_0099 NC_015061.1 104806 105810 D PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ddd:Dda3937_00500 ISEch4 transposase; transposase IS116/IS110/IS902 family protein 104806..105810 Rahnella sp. Y9602 10211059 YP_004210859.1 CDS Rahaq_0100 NC_015061.1 106104 106712 R KEGG: vei:Veis_0004 mobile mystery protein B; TIGRFAM: mobile mystery protein B; PFAM: filamentation induced by cAMP protein Fic; mobile mystery protein B complement(106104..106712) Rahnella sp. Y9602 10211060 YP_004210860.1 CDS Rahaq_0101 NC_015061.1 106709 107176 R TIGRFAM: mobile mystery protein A; PFAM: helix-turn-helix domain protein; KEGG: dap:Dacet_0535 transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein; mobile mystery protein A complement(106709..107176) Rahnella sp. Y9602 10211061 YP_004210861.1 CDS Rahaq_0102 NC_015061.1 107367 108380 R PFAM: glycoside hydrolase family 8; KEGG: dze:Dd1591_4079 cellulase; glycoside hydrolase complement(107367..108380) Rahnella sp. Y9602 10211062 YP_004210862.1 CDS Rahaq_0103 NC_015061.1 108390 108869 R KEGG: ddd:Dda3937_01993 hypothetical protein; hypothetical protein complement(108390..108869) Rahnella sp. Y9602 10211063 YP_004210863.1 CDS Rahaq_0104 NC_015061.1 108888 112850 R PFAM: cellulose synthase operon C domain protein; KEGG: ebi:EbC_44000 cellulose synthase operon protein C; cellulose synthase operon C domain-containing protein complement(108888..112850) Rahnella sp. Y9602 10211064 YP_004210864.1 CDS Rahaq_0105 NC_015061.1 112933 115422 R PFAM: Cellulose synthase BcsB; KEGG: ebi:EbC_44010 cellulose synthase operon protein B; Cellulose synthase BcsB complement(112933..115422) Rahnella sp. Y9602 10211065 YP_004210865.1 CDS Rahaq_0106 NC_015061.1 115419 117518 R KEGG: pam:PANA_0128 BcsA; TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ; cellulose synthase catalytic subunit complement(115419..117518) Rahnella sp. Y9602 10211066 YP_004210866.1 CDS Rahaq_0107 NC_015061.1 117549 118352 R TIGRFAM: cellulose synthase operon protein YhjQ; KEGG: ent:Ent638_3941 hypothetical protein; cellulose synthase operon protein YhjQ complement(117549..118352) Rahnella sp. Y9602 10211067 YP_004210867.1 CDS Rahaq_0108 NC_015061.1 118343 119113 R KEGG: ebi:EbC_44040 hypothetical protein; hypothetical protein complement(118343..119113) Rahnella sp. Y9602 10211068 YP_004210868.1 CDS Rahaq_0109 NC_015061.1 119673 121655 D KEGG: spe:Spro_0152 phosphodiesterase; PFAM: EAL domain protein; histidine kinase HAMP region domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase with extracellular sensor 119673..121655 Rahnella sp. Y9602 10211069 YP_004210869.1 CDS Rahaq_0110 NC_015061.1 121892 123175 D PFAM: sodium:dicarboxylate symporter; KEGG: yen:YE4067 C4-dicarboxylate transporter DctA; sodium:dicarboxylate symporter 121892..123175 Rahnella sp. Y9602 10211070 YP_004210870.1 CDS Rahaq_0111 NC_015061.1 123502 125016 D PFAM: peptidase M16 domain protein; KEGG: yen:YE4066 insulinase family protease; peptidase M16 domain-containing protein 123502..125016 Rahnella sp. Y9602 10211071 YP_004210871.1 CDS Rahaq_0112 NC_015061.1 125189 126127 R PFAM: PfkB domain protein; KEGG: yen:YE4065 2-dehydro-3-deoxygluconokinase; PfkB domain-containing protein complement(125189..126127) Rahnella sp. Y9602 10211072 YP_004210872.1 CDS Rahaq_0113 NC_015061.1 126321 126524 R KEGG: ypi:YpsIP31758_4060 4-oxalocrotonate tautomerase; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase complement(126321..126524) Rahnella sp. Y9602 10211073 YP_004210873.1 CDS Rahaq_0114 NC_015061.1 126848 127624 D KEGG: yen:YE4063 EAL domain-containing protein; PFAM: EAL domain protein; SMART: EAL domain protein; diguanylate phosphodiesterase 126848..127624 Rahnella sp. Y9602 10211074 YP_004210874.1 CDS Rahaq_0115 NC_015061.1 127836 129890 D PFAM: AsmA family protein; KEGG: spe:Spro_4747 AsmA family protein; AsmA family protein 127836..129890 Rahnella sp. Y9602 10211075 YP_004210875.1 CDS Rahaq_0116 NC_015061.1 129940 130710 R KEGG: spe:Spro_4746 CDP-diacylglycerol pyrophosphatase; PFAM: CDP-diacylglycerol pyrophosphatase; CDP-diacylglycerol diphosphatase complement(129940..130710) Rahnella sp. Y9602 10211076 YP_004210876.1 CDS Rahaq_0117 NC_015061.1 130770 132092 R TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); KEGG: spe:Spro_4745 major facilitator superfamily metabolite/H(+) symporter; metabolite/H+ symporter, major facilitator superfamily (MFS) complement(130770..132092) Rahnella sp. Y9602 10211077 YP_004210877.1 CDS Rahaq_0118 NC_015061.1 132380 133504 R KEGG: spe:Spro_4744 ribonuclease; TIGRFAM: ribonuclease; PFAM: ribonuclease BN; ribonuclease complement(132380..133504) Rahnella sp. Y9602 10211078 YP_004210878.1 CDS Rahaq_0119 NC_015061.1 133589 134530 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebi:EbC_01350 O-succinylbenzoate synthase; LysR family transcriptional regulator complement(133589..134530) Rahnella sp. Y9602 10211079 YP_004210879.1 CDS Rahaq_0120 NC_015061.1 134615 135373 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebi:EbC_01360 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 134615..135373 Rahnella sp. Y9602 10211080 YP_004210880.1 CDS Rahaq_0121 NC_015061.1 135377 136123 R PFAM: YcgR family protein; type IV pilus assembly PilZ; KEGG: ypb:YPTS_0948 YcgR family protein; hypothetical protein complement(135377..136123) Rahnella sp. Y9602 10211081 YP_004210881.1 CDS Rahaq_0122 NC_015061.1 136455 137033 D KEGG: pam:PANA_1606 YceJ; cytochrome B561 136455..137033 Rahnella sp. Y9602 10211082 YP_004210882.1 CDS Rahaq_0123 NC_015061.1 137065 137607 D KEGG: spe:Spro_4454 TPR repeat-containing protein; hypothetical protein 137065..137607 Rahnella sp. Y9602 10211083 YP_004210883.1 CDS Rahaq_0124 NC_015061.1 137688 138143 D KEGG: ent:Ent638_3117 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; ECF subfamily RNA polymerase sigma-24 subunit 137688..138143 Rahnella sp. Y9602 10211084 YP_004210884.1 CDS Rahaq_0125 NC_015061.1 138140 138916 D KEGG: spe:Spro_4456 transmembrane anti-sigma factor; transmembrane anti-sigma factor 138140..138916 Rahnella sp. Y9602 10211085 YP_004210885.1 CDS Rahaq_0126 NC_015061.1 139223 140872 D TIGRFAM: malate/quinone oxidoreductase; KEGG: enc:ECL_03512 malate:quinone oxidoreductase; PFAM: Malate:quinone-oxidoreductase; malate/quinone oxidoreductase 139223..140872 Rahnella sp. Y9602 10211086 YP_004210886.1 CDS Rahaq_0128 NC_015061.1 141405 142868 D KEGG: kpn:KPN_03171 hypothetical protein; hypothetical protein 141405..142868 Rahnella sp. Y9602 10211088 YP_004210887.1 CDS Rahaq_0129 NC_015061.1 142868 143920 D KEGG: ent:Ent638_2910 ImpA domain-containing protein; ImpA domain-containing protein 142868..143920 Rahnella sp. Y9602 10211089 YP_004210888.1 CDS Rahaq_0131 NC_015061.1 144330 144851 D KEGG: ctu:Ctu_27030 hypothetical protein; hypothetical protein 144330..144851 Rahnella sp. Y9602 10211091 YP_004210889.1 CDS Rahaq_0132 NC_015061.1 144854 146644 D PFAM: Protein of unknown function DUF2235; KEGG: ctu:Ctu_27040 hypothetical protein; hypothetical protein 144854..146644 Rahnella sp. Y9602 10211092 YP_004210890.1 CDS Rahaq_0133 NC_015061.1 147025 148677 D TIGRFAM: malate/quinone oxidoreductase; KEGG: spe:Spro_1524 malate:quinone oxidoreductase; PFAM: Malate:quinone-oxidoreductase; malate/quinone oxidoreductase 147025..148677 Rahnella sp. Y9602 10211093 YP_004210891.1 CDS Rahaq_0134 NC_015061.1 148770 150269 R PFAM: amino acid permease-associated region; KEGG: spe:Spro_1975 amino acid permease-associated region; amino acid permease complement(148770..150269) Rahnella sp. Y9602 10211094 YP_004210892.1 CDS Rahaq_0135 NC_015061.1 150321 150773 R PFAM: Conserved hypothetical protein CHP00022; KEGG: spe:Spro_1974 cryptic beta-D-galactosidase subunit beta; hypothetical protein complement(150321..150773) Rahnella sp. Y9602 10211095 YP_004210893.1 CDS Rahaq_0136 NC_015061.1 150773 153829 R PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 42 domain 5 loop region; KEGG: spe:Spro_1973 cryptic beta-D-galactosidase subunit alpha; glycoside hydrolase complement(150773..153829) Rahnella sp. Y9602 10211096 YP_004210894.1 CDS Rahaq_0137 NC_015061.1 153964 155013 R KEGG: spe:Spro_1972 DNA-binding transcriptional repressor EbgR; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator complement(153964..155013) Rahnella sp. Y9602 10211097 YP_004210895.1 CDS Rahaq_0138 NC_015061.1 155155 156237 D KEGG: spe:Spro_1971 hypothetical protein; hypothetical protein 155155..156237 Rahnella sp. Y9602 10211098 YP_004210896.1 CDS Rahaq_0139 NC_015061.1 156237 158618 D KEGG: spe:Spro_1970 glycosyl hydrolase; glycosyl hydrolase 156237..158618 Rahnella sp. Y9602 10211099 YP_004210897.1 CDS Rahaq_0140 NC_015061.1 159150 160403 R KEGG: pfl:PFL_0539 hydroxymethylpyrimidine transporter CytX; TIGRFAM: hydroxymethylpyrimidine transporter CytX; PFAM: permease for cytosine/purines uracil thiamine allantoin; hydroxymethylpyrimidine transporter CytX complement(159150..160403) Rahnella sp. Y9602 10211100 YP_004210898.1 CDS Rahaq_0141 NC_015061.1 160560 161216 R KEGG: ddd:Dda3937_01264 hypothetical protein; hypothetical protein complement(160560..161216) Rahnella sp. Y9602 10211101 YP_004210899.1 CDS Rahaq_0142 NC_015061.1 161404 163557 D KEGG: spe:Spro_2306 peptidyl-dipeptidase DCP; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; peptidyl-dipeptidase Dcp 161404..163557 Rahnella sp. Y9602 10211102 YP_004210900.1 CDS Rahaq_0143 NC_015061.1 163695 164753 D TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; Ada metal-binding domain-containing protein; KEGG: dda:Dd703_0019 methylated-DNA/protein-cysteine methyltransferase; SMART: Helix-turn-helix, AraC domain; methylated-DNA--protein-cysteine methyltransferase 163695..164753 Rahnella sp. Y9602 10211103 YP_004210901.1 CDS Rahaq_0144 NC_015061.1 164768 165520 D KEGG: sme:SMc01727 hypothetical protein; hypothetical protein 164768..165520 Rahnella sp. Y9602 10211104 YP_004210902.1 CDS Rahaq_0145 NC_015061.1 165492 166706 R PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_1571 major facilitator transporter; major facilitator superfamily protein complement(165492..166706) Rahnella sp. Y9602 10211105 YP_004210903.1 CDS Rahaq_0146 NC_015061.1 166778 166897 R hypothetical protein complement(166778..166897) Rahnella sp. Y9602 10211106 YP_004210904.1 CDS Rahaq_0147 NC_015061.1 166916 168001 R PFAM: protein of unknown function DUF450; KEGG: pmy:Pmen_3692 hypothetical protein; hypothetical protein complement(166916..168001) Rahnella sp. Y9602 10211107 YP_004210905.1 CDS Rahaq_0148 NC_015061.1 168145 168846 R PFAM: regulatory protein TetR; KEGG: spe:Spro_2481 TetR family transcriptional regulator; TetR family transcriptional regulator complement(168145..168846) Rahnella sp. Y9602 10211108 YP_004210906.1 CDS Rahaq_0149 NC_015061.1 168931 170430 D KEGG: spe:Spro_2480 EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA subfamily drug resistance transporter 168931..170430 Rahnella sp. Y9602 10211109 YP_004210907.1 CDS Rahaq_0150 NC_015061.1 170533 172380 D KEGG: ebi:EbC_43270 ABC transporter ATP-binding protein/permease protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 170533..172380 Rahnella sp. Y9602 10211110 YP_004210908.1 CDS Rahaq_0151 NC_015061.1 172390 173517 R PFAM: protein of unknown function DUF482; KEGG: ebi:EbC_43250 conserved uncharacterized protein; hypothetical protein complement(172390..173517) Rahnella sp. Y9602 10211111 YP_004210909.1 CDS Rahaq_0152 NC_015061.1 173681 174316 R KEGG: pen:PSEEN3600 carbonic anhydrase; PFAM: carbonic anhydrase; carbonate dehydratase complement(173681..174316) Rahnella sp. Y9602 10211112 YP_004210910.1 CDS Rahaq_0153 NC_015061.1 174537 175079 D TIGRFAM: peptide methionine sulfoxide reductase; KEGG: pam:PANA_2239 MsrA; PFAM: methionine sulfoxide reductase A; peptide methionine sulfoxide reductase 174537..175079 Rahnella sp. Y9602 10211113 YP_004210911.1 CDS Rahaq_0154 NC_015061.1 175149 175331 R PFAM: 4-oxalocrotonate tautomerase; KEGG: ara:Arad_4160 4-oxalocrotonate tautomerase protein; 4-oxalocrotonate tautomerase complement(175149..175331) Rahnella sp. Y9602 10211114 YP_004210912.1 CDS Rahaq_0155 NC_015061.1 175451 175756 R KEGG: ebi:EbC_37830 hypothetical protein; hypothetical protein complement(175451..175756) Rahnella sp. Y9602 10211115 YP_004210913.1 CDS Rahaq_0156 NC_015061.1 175777 177042 R KEGG: ebi:EbC_37840 PTS system, mannitol-specific EIIC component; PTS system, mannitol-specific EIIC component complement(175777..177042) Rahnella sp. Y9602 10211116 YP_004210914.1 CDS Rahaq_0157 NC_015061.1 177115 177417 R PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: ebi:EbC_37850 PTS system, mannitol-specific EIIB component; PTS system lactose/cellobiose-specific transporter subunit IIB complement(177115..177417) Rahnella sp. Y9602 10211117 YP_004210915.1 CDS Rahaq_0158 NC_015061.1 177483 177926 R PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: ebi:EbC_37870 PTS system, mannitol-specific EIIA component; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN complement(177483..177926) Rahnella sp. Y9602 10211118 YP_004210916.1 CDS Rahaq_0159 NC_015061.1 178133 178729 R KEGG: ebi:EbC_37880 glucokinase; glucokinase complement(178133..178729) Rahnella sp. Y9602 10211119 YP_004210917.1 CDS Rahaq_0160 NC_015061.1 178722 179657 R PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: ebi:EbC_37890 tagatose-1,6-bisphosphate aldolase; deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase complement(178722..179657) Rahnella sp. Y9602 10211120 YP_004210918.1 CDS Rahaq_0161 NC_015061.1 179891 180823 D PFAM: sugar-binding domain-containing protein; regulatory protein MarR; KEGG: ebi:EbC_37900 transcriptional regulator; MarR family transcriptional regulator 179891..180823 Rahnella sp. Y9602 10211121 YP_004210919.1 CDS Rahaq_0162 NC_015061.1 181378 181746 D KEGG: ebi:EbC_38620 hypothetical protein; hypothetical protein 181378..181746 Rahnella sp. Y9602 10211122 YP_004210920.1 CDS Rahaq_0163 NC_015061.1 181743 184658 D PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; KEGG: ent:Ent638_0982 peptidylprolyl isomerase, FKBP-type; FKBP-type peptidyl-prolyl isomerase domain-containing protein 181743..184658 Rahnella sp. Y9602 10211123 YP_004210921.1 CDS Rahaq_0164 NC_015061.1 184726 185547 R PFAM: alpha/beta hydrolase fold; KEGG: epy:EpC_35350 hydrolase, alpha/beta fold family; alpha/beta hydrolase complement(184726..185547) Rahnella sp. Y9602 10211124 YP_004210922.1 CDS Rahaq_0165 NC_015061.1 185875 186516 D PFAM: isochorismatase hydrolase; KEGG: kva:Kvar_4035 isochorismatase hydrolase; isochorismatase hydrolase 185875..186516 Rahnella sp. Y9602 10211125 YP_004210923.1 CDS Rahaq_0166 NC_015061.1 186579 186998 D PFAM: DoxX family protein; KEGG: cti:RALTA_B0391 conserved hypothetical protein; membrane protein, DoxX domain; DoxX family protein 186579..186998 Rahnella sp. Y9602 10211126 YP_004210924.1 CDS Rahaq_0167 NC_015061.1 186995 188581 D PFAM: protein of unknown function DUF894 DitE; KEGG: vap:Vapar_5468 protein of unknown function DUF894 DitE; hypothetical protein 186995..188581 Rahnella sp. Y9602 10211127 YP_004210925.1 CDS Rahaq_0168 NC_015061.1 188619 189527 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebd:ECBD_1642 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(188619..189527) Rahnella sp. Y9602 10211128 YP_004210926.1 CDS Rahaq_0169 NC_015061.1 189667 189975 D KEGG: kpu:KP1_1209 transport protein; transporter 189667..189975 Rahnella sp. Y9602 10211129 YP_004210927.1 CDS Rahaq_0170 NC_015061.1 190096 190947 D KEGG: ebi:EbC_18640 excinuclease cho; PFAM: Excinuclease ABC C subunit domain protein; SMART: Excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain-containing protein 190096..190947 Rahnella sp. Y9602 10211130 YP_004210928.1 CDS Rahaq_0171 NC_015061.1 191031 191264 R KEGG: epy:EpC_05510 conserved uncharacterized protein; hypothetical protein complement(191031..191264) Rahnella sp. Y9602 10211131 YP_004210929.1 CDS Rahaq_0172 NC_015061.1 191532 192884 R KEGG: spe:Spro_4714 glutathione reductase; TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; glutathione-disulfide reductase complement(191532..192884) Rahnella sp. Y9602 10211132 YP_004210930.1 CDS Rahaq_0173 NC_015061.1 193061 193903 R PFAM: protein of unknown function DUF519; KEGG: spe:Spro_4713 hypothetical protein; hypothetical protein complement(193061..193903) Rahnella sp. Y9602 10211133 YP_004210931.1 CDS Rahaq_0174 NC_015061.1 194085 196145 D KEGG: spe:Spro_4701 oligopeptidase A; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; oligopeptidase A 194085..196145 Rahnella sp. Y9602 10211134 YP_004210932.1 CDS Rahaq_0175 NC_015061.1 196155 196901 D PFAM: protein of unknown function DUF548; KEGG: spe:Spro_4700 methyltransferase; hypothetical protein 196155..196901 Rahnella sp. Y9602 10211135 YP_004210933.1 CDS Rahaq_0176 NC_015061.1 196995 197435 R PFAM: UspA domain-containing protein; KEGG: spe:Spro_4691 UspA domain-containing protein; UspA domain-containing protein complement(196995..197435) Rahnella sp. Y9602 10211136 YP_004210934.1 CDS Rahaq_0177 NC_015061.1 197773 198108 D PFAM: Universal stress protein B; KEGG: spe:Spro_4690 universal stress protein UspB; Universal stress protein B 197773..198108 Rahnella sp. Y9602 10211137 YP_004210935.1 CDS Rahaq_0178 NC_015061.1 198209 199714 R PFAM: phosphate transporter; KEGG: spe:Spro_4689 phosphate transporter; phosphate transporter complement(198209..199714) Rahnella sp. Y9602 10211138 YP_004210936.1 CDS Rahaq_0179 NC_015061.1 200026 201228 D PFAM: HI0933 family protein; KEGG: ypb:YPTS_4023 hypothetical protein; hypothetical protein 200026..201228 Rahnella sp. Y9602 10211139 YP_004210937.1 CDS Rahaq_0180 NC_015061.1 201369 201677 R KEGG: dda:Dd703_2588 hypothetical protein; hypothetical protein complement(201369..201677) Rahnella sp. Y9602 10211140 YP_004210938.1 CDS Rahaq_0181 NC_015061.1 201719 203374 R KEGG: pct:PC1_3039 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer complement(201719..203374) Rahnella sp. Y9602 10211141 YP_004210939.1 CDS Rahaq_0182 NC_015061.1 203531 203773 D KEGG: dan:Dana_GF19434 GF19434 gene product from transcript GF19434-RA; hypothetical protein 203531..203773 Rahnella sp. Y9602 10211142 YP_004210940.1 CDS Rahaq_0183 NC_015061.1 203770 205020 D PFAM: beta-lactamase; KEGG: eca:ECA0077 hypothetical protein; beta-lactamase 203770..205020 Rahnella sp. Y9602 10211143 YP_004210941.1 CDS Rahaq_0184 NC_015061.1 205022 206728 R KEGG: ebi:EbC_38020 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(205022..206728) Rahnella sp. Y9602 10211144 YP_004210942.1 CDS Rahaq_0185 NC_015061.1 206927 208153 D PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_0088 major facilitator superfamily transporter; major facilitator superfamily protein 206927..208153 Rahnella sp. Y9602 10211145 YP_004210943.1 CDS Rahaq_0186 NC_015061.1 208150 208659 R PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_4654 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(208150..208659) Rahnella sp. Y9602 10211146 YP_004210944.1 CDS Rahaq_0187 NC_015061.1 209085 210935 R KEGG: cpy:Cphy_0396 hypothetical protein; hypothetical protein complement(209085..210935) Rahnella sp. Y9602 10211147 YP_004210945.1 CDS Rahaq_0188 NC_015061.1 210978 213074 R KEGG: cpy:Cphy_0396 hypothetical protein; hypothetical protein complement(210978..213074) Rahnella sp. Y9602 10211148 YP_004210946.1 CDS Rahaq_0189 NC_015061.1 213312 214007 D PFAM: Pirin domain protein; KEGG: yen:YE4023 hypothetical protein; pirin 213312..214007 Rahnella sp. Y9602 10211149 YP_004210947.1 CDS Rahaq_0190 NC_015061.1 214072 216792 R KEGG: yen:YE4059 autotransporter protein; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; Pertactin; outer membrane autotransporter barrel domain-containing protein complement(214072..216792) Rahnella sp. Y9602 10211150 YP_004210948.1 CDS Rahaq_0191 NC_015061.1 217193 217516 D PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: asa:ASA_0480 PTS system cellobiose-specific IIB component; PTS system lactose/cellobiose-specific transporter subunit IIB 217193..217516 Rahnella sp. Y9602 10211151 YP_004210949.1 CDS Rahaq_0192 NC_015061.1 217513 218841 D TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; KEGG: pwa:Pecwa_0034 PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC; PTS system lactose/cellobiose family transporter subunit IIC 217513..218841 Rahnella sp. Y9602 10211152 YP_004210950.1 CDS Rahaq_0193 NC_015061.1 218895 220277 D KEGG: pct:PC1_0030 beta-glucosidase; PFAM: glycoside hydrolase family 1; 6-phospho-beta-glucosidase 218895..220277 Rahnella sp. Y9602 10211153 YP_004210951.1 CDS Rahaq_0194 NC_015061.1 220291 221208 D KEGG: yen:YE1295 LacI family transcriptional regulatory protein; PFAM: regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator 220291..221208 Rahnella sp. Y9602 10211154 YP_004210952.1 CDS Rahaq_0195 NC_015061.1 221308 222309 D KEGG: spe:Spro_4652 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator 221308..222309 Rahnella sp. Y9602 10211155 YP_004210953.1 CDS Rahaq_0196 NC_015061.1 222455 222970 R TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; KEGG: pct:PC1_3943 carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; thermoresistant glucokinase family carbohydrate kinase complement(222455..222970) Rahnella sp. Y9602 10211156 YP_004210954.1 CDS Rahaq_0197 NC_015061.1 223217 224533 D KEGG: yen:YE4021 gluconate permease; TIGRFAM: gluconate transporter; PFAM: gluconate transporter; gluconate transporter 223217..224533 Rahnella sp. Y9602 10211157 YP_004210955.1 CDS Rahaq_0198 NC_015061.1 224656 224988 D KEGG: plu:plu3981 hypothetical protein; hypothetical protein 224656..224988 Rahnella sp. Y9602 10211158 YP_004210956.1 CDS Rahaq_0199 NC_015061.1 225004 225294 D KEGG: cko:CKO_04948 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 225004..225294 Rahnella sp. Y9602 10211159 YP_004210957.1 CDS Rahaq_0200 NC_015061.1 225349 225942 R PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: eca:ECA4157 dITP- and XTP- hydrolase; multiple antibiotic resistance (MarC)-like protein complement(225349..225942) Rahnella sp. Y9602 10211160 YP_004210958.1 CDS Rahaq_0201 NC_015061.1 226153 227256 D TIGRFAM: aspartate-semialdehyde dehydrogenase; KEGG: yen:YE4018 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding; aspartate-semialdehyde dehydrogenase 226153..227256 Rahnella sp. Y9602 10211161 YP_004210959.1 CDS Rahaq_0202 NC_015061.1 227669 229852 D TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; KEGG: spe:Spro_4647 glycogen branching enzyme; SMART: alpha amylase catalytic sub domain; 1,4-alpha-glucan-branching protein 227669..229852 Rahnella sp. Y9602 10211162 YP_004210960.1 CDS Rahaq_0203 NC_015061.1 229852 231876 D TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; KEGG: spe:Spro_4646 glycogen debranching enzyme; SMART: alpha amylase catalytic sub domain; glycogen debranching protein GlgX 229852..231876 Rahnella sp. Y9602 10211163 YP_004210961.1 CDS Rahaq_0204 NC_015061.1 231894 233171 D KEGG: spe:Spro_4645 glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate adenylyltransferase 231894..233171 Rahnella sp. Y9602 10211164 YP_004210962.1 CDS Rahaq_0205 NC_015061.1 233243 234679 D TIGRFAM: glycogen/starch synthase, ADP-glucose type; KEGG: spe:Spro_4644 glycogen synthase; PFAM: Starch synthase catalytic domain-containing protein; glycosyl transferase group 1; glycogen/starch synthase 233243..234679 Rahnella sp. Y9602 10211165 YP_004210963.1 CDS Rahaq_0206 NC_015061.1 234717 237164 D TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; KEGG: ypg:YpAngola_A4122 glycogen phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase 234717..237164 Rahnella sp. Y9602 10211166 YP_004210964.1 CDS Rahaq_0207 NC_015061.1 237309 238820 R KEGG: spe:Spro_4642 glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase; glycerol-3-phosphate dehydrogenase complement(237309..238820) Rahnella sp. Y9602 10211167 YP_004210965.1 CDS Rahaq_0208 NC_015061.1 239098 239856 R KEGG: yen:YE3987 DNA-binding transcriptional repressor GlpR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator complement(239098..239856) Rahnella sp. Y9602 10211168 YP_004210966.1 CDS Rahaq_0209 NC_015061.1 239866 240699 R KEGG: yen:YE3988 intramembrane serine protease GlpG; PFAM: Rhomboid family protein; rhomboid protease complement(239866..240699) Rahnella sp. Y9602 10211169 YP_004210967.1 CDS Rahaq_0210 NC_015061.1 240808 242076 R PFAM: HipA domain protein; KEGG: bam:Bamb_5437 HipA domain-containing protein; HipA domain-containing protein complement(240808..242076) Rahnella sp. Y9602 10211170 YP_004210968.1 CDS Rahaq_0211 NC_015061.1 242073 242561 R manually curated; PFAM: helix-turn-helix domain protein; KEGG: ecc:c5295 hypothetical protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(242073..242561) Rahnella sp. Y9602 10211171 YP_004210969.1 CDS Rahaq_0212 NC_015061.1 242681 243871 R PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: tra:Trad_2517 Cys/Met metabolism pyridoxal-phosphate-dependent protein; Cys/Met metabolism pyridoxal-phosphate-dependent protein complement(242681..243871) Rahnella sp. Y9602 10211172 YP_004210970.1 CDS Rahaq_0213 NC_015061.1 244012 244332 R PFAM: Rhodanese domain protein; KEGG: ebi:EbC_42170 thiosulfate sulfurtransferase; SMART: Rhodanese domain protein; thiosulfate sulfurtransferase complement(244012..244332) Rahnella sp. Y9602 10211173 YP_004210971.1 CDS Rahaq_0214 NC_015061.1 244417 245172 R KEGG: enc:ECL_00585 transcriptional repressor UlaR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator complement(244417..245172) Rahnella sp. Y9602 10211174 YP_004210972.1 CDS Rahaq_0215 NC_015061.1 245287 246351 R KEGG: kva:Kvar_4669 enzyme with metallo-hydrolase domain protein; enzyme with metallo-hydrolase domain protein complement(245287..246351) Rahnella sp. Y9602 10211175 YP_004210973.1 CDS Rahaq_0216 NC_015061.1 246764 248167 D KEGG: set:SEN4149 PTS system ascorbate-specific transporter subunit IIC; PTS system ascorbate-specific transporter subunit IIC 246764..248167 Rahnella sp. Y9602 10211176 YP_004210974.1 CDS Rahaq_0217 NC_015061.1 248224 248532 D KEGG: sbc:SbBS512_E4724 PTS system L-ascorbate-specific transporter subunit IIB; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; Protein-N(pi)-phosphohistidine--sugar phosphotransferase 248224..248532 Rahnella sp. Y9602 10211177 YP_004210975.1 CDS Rahaq_0218 NC_015061.1 248543 249013 D PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: set:SEN4151 PTS system L-ascorbate-specific transporter subunit IIA; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 248543..249013 Rahnella sp. Y9602 10211178 YP_004210976.1 CDS Rahaq_0219 NC_015061.1 249039 249695 D PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: ecz:ECS88_4782 3-keto-L-gulonate-6-phosphate decarboxylase; Orotidine 5'-phosphate decarboxylase 249039..249695 Rahnella sp. Y9602 10211179 YP_004210977.1 CDS Rahaq_0220 NC_015061.1 249706 250566 D TIGRFAM: hexulose-6-phosphate isomerase; KEGG: seh:SeHA_C4805 L-xylulose 5-phosphate 3-epimerase; PFAM: Xylose isomerase domain-containing protein TIM barrel; hexulose-6-phosphate isomerase 249706..250566 Rahnella sp. Y9602 10211180 YP_004210978.1 CDS Rahaq_0221 NC_015061.1 250563 251252 D PFAM: class II aldolase/adducin family protein; KEGG: sea:SeAg_B4666 L-ribulose-5-phosphate 4-epimerase; class II aldolase/adducin family protein 250563..251252 Rahnella sp. Y9602 10211181 YP_004210979.1 CDS Rahaq_0222 NC_015061.1 251209 251403 R KEGG: cfl:Cfla_3242 major facilitator superfamily MFS_1; hypothetical protein complement(251209..251403) Rahnella sp. Y9602 10211182 YP_004210980.1 CDS Rahaq_0223 NC_015061.1 251520 253934 D KEGG: spe:Spro_4636 glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase 251520..253934 Rahnella sp. Y9602 10211183 YP_004210981.1 CDS Rahaq_0224 NC_015061.1 253943 256018 D TIGRFAM: 4-alpha-glucanotransferase; KEGG: yen:YE3992 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77; 4-alpha-glucanotransferase 253943..256018 Rahnella sp. Y9602 10211184 YP_004210982.1 CDS Rahaq_0225 NC_015061.1 256074 256649 R KEGG: eay:EAM_3259 Fe-S protein; TIGRFAM: IscR-regulated protein YhgI; PFAM: HesB/YadR/YfhF-family protein; nitrogen-fixing NifU domain protein; IscR-regulated protein YhgI complement(256074..256649) Rahnella sp. Y9602 10211185 YP_004210983.1 CDS Rahaq_0226 NC_015061.1 256747 257436 R PFAM: phosphoribosyltransferase; KEGG: spe:Spro_4633 gluconate periplasmic binding protein; phosphoribosyltransferase complement(256747..257436) Rahnella sp. Y9602 10211186 YP_004210984.1 CDS Rahaq_0227 NC_015061.1 257483 258265 D KEGG: spe:Spro_4632 BioH protein; TIGRFAM: bioH protein; PFAM: alpha/beta hydrolase fold; bioH protein 257483..258265 Rahnella sp. Y9602 10211187 YP_004210985.1 CDS Rahaq_0228 NC_015061.1 258486 258755 D PFAM: protein of unknown function DUF1471; KEGG: yen:YE3996 hypothetical protein; hypothetical protein 258486..258755 Rahnella sp. Y9602 10211188 YP_004210986.1 CDS Rahaq_0229 NC_015061.1 259063 260724 D TIGRFAM: malonate decarboxylase, subunit alpha; KEGG: enc:ECL_04727 malonate decarboxylase, subunit alpha; malonate decarboxylase subunit alpha 259063..260724 Rahnella sp. Y9602 10211189 YP_004210987.1 CDS Rahaq_0230 NC_015061.1 260730 261587 D TIGRFAM: triphosphoribosyl-dephospho-CoA synthase MdcB; KEGG: kpn:KPN_01562 triphosphoribosyl-dephospho-CoA transferase; PFAM: triphosphoribosyl-dephospho-CoA protein; triphosphoribosyl-dephospho-CoA synthase MdcB 260730..261587 Rahnella sp. Y9602 10211190 YP_004210988.1 CDS Rahaq_0231 NC_015061.1 261628 261930 D KEGG: kpu:KP1_2579 malonate decarboxylase subunit delta; TIGRFAM: malonate decarboxylase acyl carrier protein; PFAM: malonate decarboxylase subunit delta; malonate decarboxylase acyl carrier protein 261628..261930 Rahnella sp. Y9602 10211191 YP_004210989.1 CDS Rahaq_0232 NC_015061.1 261920 262762 D TIGRFAM: malonate decarboxylase, subunit beta; KEGG: cro:ROD_44601 malonate decarboxylase subunit beta MdcD; malonate decarboxylase subunit beta 261920..262762 Rahnella sp. Y9602 10211192 YP_004210990.1 CDS Rahaq_0233 NC_015061.1 262759 263574 D KEGG: dda:Dd703_1243 malonate decarboxylase, subunit gamma; TIGRFAM: malonate decarboxylase, subunit gamma; PFAM: malonate decarboxylase subunit gamma; malonate decarboxylase subunit gamma 262759..263574 Rahnella sp. Y9602 10211193 YP_004210991.1 CDS Rahaq_0234 NC_015061.1 263765 264727 D KEGG: cko:CKO_04764 hypothetical protein; TIGRFAM: auxin efflux carrier; PFAM: Auxin Efflux Carrier; auxin efflux carrier 263765..264727 Rahnella sp. Y9602 10211194 YP_004210992.1 CDS Rahaq_0235 NC_015061.1 264745 265371 D TIGRFAM: holo-ACP synthase, malonate decarboxylase-specific; KEGG: ctu:Ctu_35010 phosphoribosyl-dephospho-CoA transferase; PFAM: Holo-ACP synthase, malonate decarboxylase-specific; malonate decarboxylase-specific holo-ACP synthase 264745..265371 Rahnella sp. Y9602 10211195 YP_004210993.1 CDS Rahaq_0236 NC_015061.1 265399 266334 D KEGG: dda:Dd703_1240 malonate decarboxylase, subunit epsilon; TIGRFAM: malonate decarboxylase, subunit epsilon; PFAM: Acyl transferase; malonate decarboxylase subunit epsilon 265399..266334 Rahnella sp. Y9602 10211196 YP_004210994.1 CDS Rahaq_0237 NC_015061.1 266435 266674 D KEGG: cro:ROD_27521 hypothetical protein; hypothetical protein 266435..266674 Rahnella sp. Y9602 10211197 YP_004210995.1 CDS Rahaq_0238 NC_015061.1 266658 266924 D KEGG: nwi:Nwi_1574 hypothetical protein; hypothetical protein 266658..266924 Rahnella sp. Y9602 10211198 YP_004210996.1 CDS Rahaq_0239 NC_015061.1 266904 267824 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: enc:ECL_04719 LysR family transcriptional regulator; LysR family transcriptional regulator complement(266904..267824) Rahnella sp. Y9602 10211199 YP_004210997.1 CDS Rahaq_0240 NC_015061.1 267893 268132 R PFAM: protein of unknown function DUF1920; KEGG: yen:YE3997 hypothetical protein; hypothetical protein complement(267893..268132) Rahnella sp. Y9602 10211200 YP_004210998.1 CDS Rahaq_0241 NC_015061.1 268141 270459 R KEGG: yen:YE3998 ferrous iron transport protein B; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B domain-containing protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain-containing protein; ferrous iron transport protein B complement(268141..270459) Rahnella sp. Y9602 10211201 YP_004210999.1 CDS Rahaq_0242 NC_015061.1 270546 270770 R PFAM: FeoA family protein; KEGG: yen:YE3999 ferrous iron transport protein A; FeoA family protein complement(270546..270770) Rahnella sp. Y9602 10211202 YP_004211000.1 CDS Rahaq_0243 NC_015061.1 271169 273499 R KEGG: eok:G2583_4104 protein YhgF; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; Tex-like protein complement(271169..273499) Rahnella sp. Y9602 10211203 YP_004211001.1 CDS Rahaq_0244 NC_015061.1 273611 274084 R KEGG: kpu:KP1_5107 transcription elongation factor GreB; TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain-containing protein; transcription elongation factor GreB complement(273611..274084) Rahnella sp. Y9602 10211204 YP_004211002.1 CDS Rahaq_0245 NC_015061.1 274316 280333 D PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: ypz:YPZ3_2273 membrane protein; alpha-2-macroglobulin 274316..280333 Rahnella sp. Y9602 10211205 YP_004211003.1 CDS Rahaq_0246 NC_015061.1 280390 282759 D KEGG: ypy:YPK_3054 penicillin-binding protein 1C; TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; penicillin-binding protein 1C 280390..282759 Rahnella sp. Y9602 10211206 YP_004211004.1 CDS Rahaq_0247 NC_015061.1 282774 283889 R KEGG: eok:G2583_3869 fimbrial protein; fimbrial protein complement(282774..283889) Rahnella sp. Y9602 10211207 YP_004211005.1 CDS Rahaq_0248 NC_015061.1 283899 286442 R PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: ecy:ECSE_3430 fimbrial usher protein; fimbrial biogenesis outer membrane usher protein complement(283899..286442) Rahnella sp. Y9602 10211208 YP_004211006.1 CDS Rahaq_0249 NC_015061.1 286515 287201 R PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: esa:ESA_02344 hypothetical protein; Pili assembly chaperone, N-terminal protein complement(286515..287201) Rahnella sp. Y9602 10211209 YP_004211007.1 CDS Rahaq_0250 NC_015061.1 287306 287854 R PFAM: Fimbrial protein domain-containing protein; KEGG: ebw:BWG_2846 fimbrial-like adhesin protein; fimbrial protein domain-containing protein complement(287306..287854) Rahnella sp. Y9602 10211210 YP_004211008.1 CDS Rahaq_0251 NC_015061.1 288153 288422 R hypothetical protein complement(288153..288422) Rahnella sp. Y9602 10211211 YP_004211009.1 CDS Rahaq_0252 NC_015061.1 288444 289163 D KEGG: spe:Spro_4621 osmolarity response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator 288444..289163 Rahnella sp. Y9602 10211212 YP_004211010.1 CDS Rahaq_0253 NC_015061.1 289160 290521 D KEGG: yen:YE4005 osmolarity sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase 289160..290521 Rahnella sp. Y9602 10211213 YP_004211011.1 CDS Rahaq_0254 NC_015061.1 290733 291212 R KEGG: spe:Spro_4619 PilT domain-containing protein; twitching motility protein PilT complement(290733..291212) Rahnella sp. Y9602 10211214 YP_004211012.1 CDS Rahaq_0255 NC_015061.1 291209 291421 R KEGG: spe:Spro_4618 hypothetical protein; hypothetical protein complement(291209..291421) Rahnella sp. Y9602 10211215 YP_004211013.1 CDS Rahaq_0256 NC_015061.1 291525 293147 R TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); KEGG: esa:ESA_04336 phosphoenolpyruvate carboxykinase; PFAM: phosphoenolpyruvate carboxykinase (ATP); phosphoenolpyruvate carboxykinase complement(291525..293147) Rahnella sp. Y9602 10211216 YP_004211014.1 CDS Rahaq_0257 NC_015061.1 293375 294286 R PFAM: Hsp33 protein; KEGG: ypb:YPTS_3957 HSP33-like chaperonin; Hsp33 protein complement(293375..294286) Rahnella sp. Y9602 10211217 YP_004211015.1 CDS Rahaq_0258 NC_015061.1 294318 294722 R KEGG: spe:Spro_4615 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein complement(294318..294722) Rahnella sp. Y9602 10211218 YP_004211016.1 CDS Rahaq_0259 NC_015061.1 294747 295436 R KEGG: spe:Spro_4614 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase complement(294747..295436) Rahnella sp. Y9602 10211219 YP_004211017.1 CDS Rahaq_0260 NC_015061.1 295551 297683 R PFAM: Intracellular growth attenuator IgaA; KEGG: spe:Spro_4613 intracellular growth attenuator IgaA; intracellular growth attenuator igaA complement(295551..297683) Rahnella sp. Y9602 10211220 YP_004211018.1 CDS Rahaq_0261 NC_015061.1 297971 298099 R hypothetical protein complement(297971..298099) Rahnella sp. Y9602 10211221 YP_004211019.1 CDS Rahaq_0262 NC_015061.1 298141 298698 D PFAM: NUDIX hydrolase; KEGG: spe:Spro_4612 ADP-ribose diphosphatase NudE; NUDIX hydrolase 298141..298698 Rahnella sp. Y9602 10211222 YP_004211020.1 CDS Rahaq_0263 NC_015061.1 298773 301328 R TIGRFAM: penicillin-binding protein, 1A family; KEGG: yen:YE3979 peptidoglycan synthetase; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein complement(298773..301328) Rahnella sp. Y9602 10211223 YP_004211021.1 CDS Rahaq_0264 NC_015061.1 301450 302289 D KEGG: ddc:Dd586_3806 hypothetical protein; hypothetical protein 301450..302289 Rahnella sp. Y9602 10211224 YP_004211022.1 CDS Rahaq_0265 NC_015061.1 302289 302852 D PFAM: Fimbrial assembly family protein; KEGG: spe:Spro_4609 fimbrial assembly family protein; fimbrial assembly family protein 302289..302852 Rahnella sp. Y9602 10211225 YP_004211023.1 CDS Rahaq_0266 NC_015061.1 302849 303709 D KEGG: pam:PANA_3670 hypothetical protein; hypothetical protein 302849..303709 Rahnella sp. Y9602 10211226 YP_004211024.1 CDS Rahaq_0267 NC_015061.1 303709 304971 D KEGG: pwa:Pecwa_4062 outer membrane porin HofQ; TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; type IV pilus secretin PilQ 303709..304971 Rahnella sp. Y9602 10211227 YP_004211025.1 CDS Rahaq_0268 NC_015061.1 305266 305841 D KEGG: sgl:SG2309 shikimate kinase I; PFAM: shikimate kinase; shikimate kinase 305266..305841 Rahnella sp. Y9602 10211228 YP_004211026.1 CDS Rahaq_0269 NC_015061.1 305899 306981 D TIGRFAM: 3-dehydroquinate synthase; KEGG: spe:Spro_4604 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase 305899..306981 Rahnella sp. Y9602 10211229 YP_004211027.1 CDS Rahaq_0270 NC_015061.1 307109 308158 D PFAM: Sporulation domain-containing protein; KEGG: spe:Spro_4603 hypothetical protein; sporulation domain-containing protein 307109..308158 Rahnella sp. Y9602 10211230 YP_004211028.1 CDS Rahaq_0271 NC_015061.1 308241 309056 D KEGG: ypb:YPTS_3942 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; DNA adenine methylase 308241..309056 Rahnella sp. Y9602 10211231 YP_004211029.1 CDS Rahaq_0272 NC_015061.1 309107 309784 D TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: kva:Kvar_0344 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 309107..309784 Rahnella sp. Y9602 10211232 YP_004211030.1 CDS Rahaq_0273 NC_015061.1 309777 310475 D KEGG: yen:YE3970 phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoglycolate phosphatase 309777..310475 Rahnella sp. Y9602 10211233 YP_004211031.1 CDS Rahaq_0274 NC_015061.1 310477 311493 D TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: pwa:Pecwa_4054 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; tryptophanyl-tRNA synthetase 310477..311493 Rahnella sp. Y9602 10211234 YP_004211032.1 CDS Rahaq_0275 NC_015061.1 311573 312967 R KEGG: ypb:YPTS_3938 siroheme synthase; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Sirohaem synthase, dimerisation domain; uroporphyrin-III C-methyltransferase complement(311573..312967) Rahnella sp. Y9602 10211235 YP_004211033.1 CDS Rahaq_0276 NC_015061.1 313059 313409 R KEGG: ypb:YPTS_3936 nitrite reductase small subunit; TIGRFAM: nitrite reductase [NAD(P)H], small subunit; nitrite reductase (NAD(P)H) small subunit complement(313059..313409) Rahnella sp. Y9602 10211236 YP_004211034.1 CDS Rahaq_0277 NC_015061.1 313406 315958 R KEGG: spe:Spro_4595 nitrite reductase (NAD(P)H), large subunit; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; nitrite reductase (NAD(P)H) large subunit complement(313406..315958) Rahnella sp. Y9602 10211237 YP_004211035.1 CDS Rahaq_0278 NC_015061.1 316182 317465 D KEGG: spe:Spro_4594 cytosine deaminase; PFAM: Amidohydrolase 3; cytosine deaminase 316182..317465 Rahnella sp. Y9602 10211238 YP_004211036.1 CDS Rahaq_0279 NC_015061.1 317611 318177 D KEGG: spe:Spro_4589 peptidyl-prolyl cis-trans isomerase A (rotamase A); PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; Peptidylprolyl isomerase 317611..318177 Rahnella sp. Y9602 10211239 YP_004211037.1 CDS Rahaq_0280 NC_015061.1 318319 319842 D PFAM: protein of unknown function DUF853 NPT hydrolase; KEGG: spe:Spro_4584 hypothetical protein; hypothetical protein 318319..319842 Rahnella sp. Y9602 10211240 YP_004211038.1 CDS Rahaq_0281 NC_015061.1 320086 321291 D KEGG: eca:ECA4385 hypothetical protein; hypothetical protein 320086..321291 Rahnella sp. Y9602 10211241 YP_004211039.1 CDS Rahaq_0282 NC_015061.1 321389 321559 D KEGG: esa:ESA_04371 hypothetical protein; hypothetical protein 321389..321559 Rahnella sp. Y9602 10211242 YP_004211040.1 CDS Rahaq_0283 NC_015061.1 321549 322151 D PFAM: filamentation induced by cAMP protein Fic; KEGG: ent:Ent638_3788 cell filamentation protein Fic; filamentation induced by cAMP protein fic 321549..322151 Rahnella sp. Y9602 10211243 YP_004211041.1 CDS Rahaq_0284 NC_015061.1 322228 322803 D KEGG: yen:YE3958 para-aminobenzoate synthase component II; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; glutamine amidotransferase of anthranilate synthase 322228..322803 Rahnella sp. Y9602 10211244 YP_004211042.1 CDS Rahaq_0285 NC_015061.1 322927 324144 D KEGG: ypy:YPK_0245 bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; TIGRFAM: succinylornithine transaminase family; acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; succinylornithine transaminase family 322927..324144 Rahnella sp. Y9602 10211245 YP_004211043.1 CDS Rahaq_0286 NC_015061.1 324838 326913 R TIGRFAM: integral membrane protein, YccS/YhfK family; KEGG: spe:Spro_4581 YccS/YhfK family integral membrane protein; YccS/YhfK family integral membrane protein complement(324838..326913) Rahnella sp. Y9602 10211246 YP_004211044.1 CDS Rahaq_0287 NC_015061.1 326975 327607 R KEGG: ebi:EbC_41710 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; Crp/Fnr family transcriptional regulator complement(326975..327607) Rahnella sp. Y9602 10211247 YP_004211045.1 CDS Rahaq_0288 NC_015061.1 327970 328377 D PFAM: OsmC family protein; KEGG: spe:Spro_4579 hypothetical protein; OsmC family protein 327970..328377 Rahnella sp. Y9602 10211248 YP_004211046.1 CDS Rahaq_0289 NC_015061.1 328381 329250 R KEGG: spe:Spro_4578 phosphoribulokinase; Phosphoribulokinase complement(328381..329250) Rahnella sp. Y9602 10211249 YP_004211047.1 CDS Rahaq_0290 NC_015061.1 329386 330300 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cko:CKO_04286 DNA-binding transcriptional activator AllS; LysR family transcriptional regulator complement(329386..330300) Rahnella sp. Y9602 10211250 YP_004211048.1 CDS Rahaq_0291 NC_015061.1 330515 331021 D KEGG: kpu:KP1_1359 ureidoglycolate hydrolase; PFAM: Ureidoglycolate hydrolase; ureidoglycolate hydrolase 330515..331021 Rahnella sp. Y9602 10211251 YP_004211049.1 CDS Rahaq_0292 NC_015061.1 331108 331917 D KEGG: ecy:ECSE_0532 DNA-binding transcriptional repressor AllR; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; IclR family transcriptional regulator 331108..331917 Rahnella sp. Y9602 10211252 YP_004211050.1 CDS Rahaq_0293 NC_015061.1 332032 333813 D KEGG: eck:EC55989_0522 glyoxylate carboligase; TIGRFAM: glyoxylate carboligase; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; glyoxylate carboligase 332032..333813 Rahnella sp. Y9602 10211253 YP_004211051.1 CDS Rahaq_0294 NC_015061.1 333829 334605 D TIGRFAM: hydroxypyruvate isomerase; KEGG: ecl:EcolC_3114 hydroxypyruvate isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel; hydroxypyruvate isomerase 333829..334605 Rahnella sp. Y9602 10211254 YP_004211052.1 CDS Rahaq_0295 NC_015061.1 334697 335575 D TIGRFAM: 2-hydroxy-3-oxopropionate reductase; KEGG: ecc:c0624 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 2-hydroxy-3-oxopropionate reductase 334697..335575 Rahnella sp. Y9602 10211255 YP_004211053.1 CDS Rahaq_0296 NC_015061.1 335651 337105 D KEGG: sed:SeD_A0570 allantoin permease; TIGRFAM: NCS1 nucleoside transporter family; PFAM: permease for cytosine/purines uracil thiamine allantoin; NCS1 nucleoside transporter family 335651..337105 Rahnella sp. Y9602 10211256 YP_004211054.1 CDS Rahaq_0297 NC_015061.1 337188 338549 D KEGG: kpu:KP1_1367 allantoinase; TIGRFAM: allantoinase; PFAM: amidohydrolase; allantoinase 337188..338549 Rahnella sp. Y9602 10211257 YP_004211055.1 CDS Rahaq_0298 NC_015061.1 338612 339898 D PFAM: Xanthine/uracil/vitamin C permease; KEGG: kpu:KP1_1368 purine permease YbbY; xanthine/uracil/vitamin C permease 338612..339898 Rahnella sp. Y9602 10211258 YP_004211056.1 CDS Rahaq_0299 NC_015061.1 339923 341068 D TIGRFAM: glycerate kinase; KEGG: sea:SeAg_B0571 glycerate kinase II; PFAM: glycerate kinase; glycerate kinase 339923..341068 Rahnella sp. Y9602 10211259 YP_004211057.1 CDS Rahaq_0300 NC_015061.1 341136 341927 R KEGG: ecw:EcE24377A_0553 hypothetical protein; TIGRFAM: allantoin catabolism protein; PFAM: Cupin 2 conserved barrel domain protein; protein of unknown function DUF861 cupin_3; allantoin catabolism protein complement(341136..341927) Rahnella sp. Y9602 10211260 YP_004211058.1 CDS Rahaq_0301 NC_015061.1 341950 343176 R TIGRFAM: allantoate amidohydrolase; amidase, hydantoinase/carbamoylase family; KEGG: kpu:KP1_1372 allantoate amidohydrolase; PFAM: peptidase M20; allantoate amidohydrolase complement(341950..343176) Rahnella sp. Y9602 10211261 YP_004211059.1 CDS Rahaq_0302 NC_015061.1 343202 344251 R KEGG: kpu:KP1_1373 malate dehydrogenase; TIGRFAM: ureidoglycolate dehydrogenase; PFAM: Malate/L-lactate dehydrogenase; ureidoglycolate dehydrogenase complement(343202..344251) Rahnella sp. Y9602 10211262 YP_004211060.1 CDS Rahaq_0303 NC_015061.1 344549 346216 D KEGG: eok:G2583_0638 bacterial FdrA protein; membrane protein FdrA 344549..346216 Rahnella sp. Y9602 10211263 YP_004211061.1 CDS Rahaq_0304 NC_015061.1 346250 347518 D PFAM: protein of unknown function DUF1116; KEGG: set:SEN0511 hypothetical protein; hypothetical protein 346250..347518 Rahnella sp. Y9602 10211264 YP_004211062.1 CDS Rahaq_0305 NC_015061.1 347515 348276 D KEGG: sbc:SbBS512_E0454 hypothetical protein; hypothetical protein 347515..348276 Rahnella sp. Y9602 10211265 YP_004211063.1 CDS Rahaq_0306 NC_015061.1 348286 349185 D TIGRFAM: carbamate kinase; KEGG: eum:ECUMN_0561 carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase; carbamate kinase 348286..349185 Rahnella sp. Y9602 10211266 YP_004211064.1 CDS Rahaq_0307 NC_015061.1 349217 349462 R PFAM: protein of unknown function UPF0270; KEGG: spe:Spro_4577 hypothetical protein; hypothetical protein complement(349217..349462) Rahnella sp. Y9602 10211267 YP_004211065.1 CDS Rahaq_0308 NC_015061.1 349459 350454 R PFAM: alpha/beta hydrolase fold; KEGG: ypb:YPTS_3916 hydrolase; alpha/beta hydrolase complement(349459..350454) Rahnella sp. Y9602 10211268 YP_004211066.1 CDS Rahaq_0309 NC_015061.1 350555 351157 D PFAM: lysine exporter protein (LYSE/YGGA); KEGG: yen:YE3950 ABC-transport protein; lysine exporter protein LysE/YggA 350555..351157 Rahnella sp. Y9602 10211269 YP_004211067.1 CDS Rahaq_0310 NC_015061.1 351218 353134 R KEGG: yen:YE3942 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(351218..353134) Rahnella sp. Y9602 10211270 YP_004211068.1 CDS Rahaq_0311 NC_015061.1 353264 353818 D PFAM: NAD(P)H dehydrogenase (quinone); KEGG: spe:Spro_4561 glutathione-regulated potassium-efflux system ancillary protein KefG; NAD(P)H dehydrogenase (quinone) 353264..353818 Rahnella sp. Y9602 10211271 YP_004211069.1 CDS Rahaq_0312 NC_015061.1 353818 355626 D KEGG: yen:YE3940 glutathione-regulated potassium-efflux system protein KefB; TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; potassium efflux system protein 353818..355626 Rahnella sp. Y9602 10211272 YP_004211070.1 CDS Rahaq_0313 NC_015061.1 355705 355908 D PFAM: Conserved hypothetical protein CHP02443; KEGG: spe:Spro_4559 hypothetical protein; hypothetical protein 355705..355908 Rahnella sp. Y9602 10211273 YP_004211071.1 CDS Rahaq_0314 NC_015061.1 356107 356712 D KEGG: spe:Spro_4558 FKBP-type peptidyl-prolyl cis-trans isomerase; PFAM: peptidylprolyl isomerase FKBP-type; Peptidylprolyl isomerase 356107..356712 Rahnella sp. Y9602 10211274 YP_004211072.1 CDS Rahaq_0315 NC_015061.1 356790 357011 R PFAM: SlyX family protein; KEGG: ypb:YPTS_3903 hypothetical protein; SlyX family protein complement(356790..357011) Rahnella sp. Y9602 10211275 YP_004211073.1 CDS Rahaq_0316 NC_015061.1 357302 358156 D KEGG: spe:Spro_4556 FKBP-type peptidyl-prolyl cis-trans isomerase; PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; Peptidylprolyl isomerase 357302..358156 Rahnella sp. Y9602 10211276 YP_004211074.1 CDS Rahaq_0317 NC_015061.1 358421 359143 D PFAM: YheO-like domain-containing protein; KEGG: yen:YE3934 DNA-binding protein; hypothetical protein 358421..359143 Rahnella sp. Y9602 10211277 YP_004211075.1 CDS Rahaq_0318 NC_015061.1 359140 359532 D KEGG: ypb:YPTS_3900 sulfur transfer complex subunit TusD; TIGRFAM: sulfur relay protein TusD/DsrE; PFAM: DsrE family protein; sulfur relay protein TusD/DsrE 359140..359532 Rahnella sp. Y9602 10211278 YP_004211076.1 CDS Rahaq_0319 NC_015061.1 359555 359914 D KEGG: ddc:Dd586_3745 sulfur relay protein TusC/DsrF; TIGRFAM: sulfur relay protein TusC/DsrF; PFAM: DsrE family protein; sulfur relay protein TusC/DsrF 359555..359914 Rahnella sp. Y9602 10211279 YP_004211077.1 CDS Rahaq_0320 NC_015061.1 359928 360215 D KEGG: yen:YE3931 sulfur transfer complex subunit TusB; TIGRFAM: sulfur relay protein TusB/DsrH; PFAM: DsrH family protein; sulfur relay protein TusB/DsrH 359928..360215 Rahnella sp. Y9602 10211280 YP_004211078.1 CDS Rahaq_0321 NC_015061.1 360359 360733 D KEGG: dze:Dd1591_0316 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23; 30S ribosomal protein S12 360359..360733 Rahnella sp. Y9602 10211281 YP_004211079.1 CDS Rahaq_0322 NC_015061.1 360830 361300 D KEGG: pwa:Pecwa_4008 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7; 30S ribosomal protein S7 360830..361300 Rahnella sp. Y9602 10211282 YP_004211080.1 CDS Rahaq_0323 NC_015061.1 361397 363511 D KEGG: spe:Spro_4549 elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein; translation elongation factor G 361397..363511 Rahnella sp. Y9602 10211283 YP_004211081.1 CDS Rahaq_0324 NC_015061.1 363583 364767 D KEGG: spe:Spro_4548 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein; translation elongation factor Tu 363583..364767 Rahnella sp. Y9602 10211284 YP_004211082.1 CDS Rahaq_0325 NC_015061.1 364914 365108 D KEGG: enc:ECL_04701 bacterioferritin-associated ferredoxin; manually curated; PFAM: BFD domain protein [2Fe-2S]-binding domain protein; BFD (2Fe-2S)-binding domain-containing protein 364914..365108 Rahnella sp. Y9602 10211285 YP_004211083.1 CDS Rahaq_0326 NC_015061.1 365194 365673 D KEGG: ctu:Ctu_38500 bacterioferritin; TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; bacterioferritin 365194..365673 Rahnella sp. Y9602 10211286 YP_004211084.1 CDS Rahaq_0327 NC_015061.1 365685 366518 R KEGG: psp:PSPPH_0818 type IV pilus prepilin peptidase PilD; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; prepilin peptidase complement(365685..366518) Rahnella sp. Y9602 10211287 YP_004211085.1 CDS Rahaq_0328 NC_015061.1 366552 367010 R PFAM: General secretion pathway M protein; KEGG: ppr:PBPRA3472 general secretion pathway protein M; general secretion pathway protein M complement(366552..367010) Rahnella sp. Y9602 10211288 YP_004211086.1 CDS Rahaq_0329 NC_015061.1 367007 368182 R KEGG: cko:CKO_02220 hypothetical protein; TIGRFAM: general secretion pathway protein L; PFAM: General secretion pathway L; general secretion pathway protein L complement(367007..368182) Rahnella sp. Y9602 10211289 YP_004211087.1 CDS Rahaq_0330 NC_015061.1 368183 369169 R KEGG: ecz:ECS88_3720 general secretory pathway component, cryptic; general secretory pathway component, cryptic complement(368183..369169) Rahnella sp. Y9602 10211290 YP_004211088.1 CDS Rahaq_0331 NC_015061.1 369162 369845 R TIGRFAM: general secretion pathway protein J; KEGG: tau:Tola_0361 general secretion pathway protein J; general secretion pathway protein J complement(369162..369845) Rahnella sp. Y9602 10211291 YP_004211089.1 CDS Rahaq_0332 NC_015061.1 369842 370231 R KEGG: enc:ECL_02793 general secretion pathway protein I; TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; general secretion pathway protein I complement(369842..370231) Rahnella sp. Y9602 10211292 YP_004211090.1 CDS Rahaq_0333 NC_015061.1 370231 370752 R TIGRFAM: general secretion pathway protein H; KEGG: enc:ECL_02794 general secretion pathway protein H; general secretion pathway protein H complement(370231..370752) Rahnella sp. Y9602 10211293 YP_004211091.1 CDS Rahaq_0334 NC_015061.1 370755 371210 R KEGG: enc:ECL_02795 general secretion pathway protein G; TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; general secretion pathway protein G complement(370755..371210) Rahnella sp. Y9602 10211294 YP_004211092.1 CDS Rahaq_0335 NC_015061.1 371223 372440 R KEGG: ecz:ECS88_3715 general secretory pathway component, cryptic; TIGRFAM: general secretion pathway protein F; PFAM: Type II secretion system F domain; general secretion pathway protein F complement(371223..372440) Rahnella sp. Y9602 10211295 YP_004211093.1 CDS Rahaq_0336 NC_015061.1 372437 373963 R TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; KEGG: enc:ECL_02797 general secretion pathway protein E; SMART: AAA ATPase; general secretory pathway protein E complement(372437..373963) Rahnella sp. Y9602 10211296 YP_004211094.1 CDS Rahaq_0337 NC_015061.1 373967 375946 R KEGG: cro:ROD_44971 T2SS protein D; TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; general secretion pathway protein D complement(373967..375946) Rahnella sp. Y9602 10211297 YP_004211095.1 CDS Rahaq_0338 NC_015061.1 375930 376763 R KEGG: enc:ECL_02799 general secretion pathway protein C; hypothetical protein complement(375930..376763) Rahnella sp. Y9602 10211298 YP_004211096.1 CDS Rahaq_0339 NC_015061.1 376950 378482 D PFAM: Peptidoglycan-binding domain 1 protein; KEGG: cko:CKO_02233 hypothetical protein; peptidoglycan-binding domain 1 protein 376950..378482 Rahnella sp. Y9602 10211299 YP_004211097.1 CDS Rahaq_0340 NC_015061.1 378489 378974 D KEGG: pop:POPTR_785446 hypothetical protein; hypothetical protein 378489..378974 Rahnella sp. Y9602 10211300 YP_004211098.1 CDS Rahaq_0341 NC_015061.1 379209 379520 D KEGG: ent:Ent638_3752 SSU ribosomal protein S10P; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10; 30S ribosomal protein S10 379209..379520 Rahnella sp. Y9602 10211301 YP_004211099.1 CDS Rahaq_0342 NC_015061.1 379554 380183 D KEGG: spe:Spro_4544 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3; 50S ribosomal protein L3 379554..380183 Rahnella sp. Y9602 10211302 YP_004211100.1 CDS Rahaq_0343 NC_015061.1 380200 380805 D PFAM: ribosomal protein L4/L1e; KEGG: spe:Spro_4543 50S ribosomal protein L4; 50S ribosomal protein L4 380200..380805 Rahnella sp. Y9602 10211303 YP_004211101.1 CDS Rahaq_0344 NC_015061.1 380802 381104 D PFAM: Ribosomal protein L25/L23; KEGG: yen:YE3921 50S ribosomal protein L23; 50S ribosomal protein L25 380802..381104 Rahnella sp. Y9602 10211304 YP_004211102.1 CDS Rahaq_0345 NC_015061.1 381123 381947 D KEGG: ypb:YPTS_3887 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2; 50S ribosomal protein L2 381123..381947 Rahnella sp. Y9602 10211305 YP_004211103.1 CDS Rahaq_0346 NC_015061.1 381962 382240 D KEGG: pwa:Pecwa_3997 30S ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; 30S ribosomal protein S19 381962..382240 Rahnella sp. Y9602 10211306 YP_004211104.1 CDS Rahaq_0347 NC_015061.1 382255 382587 D KEGG: spe:Spro_4539 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; 50S ribosomal protein L22 382255..382587 Rahnella sp. Y9602 10211307 YP_004211105.1 CDS Rahaq_0348 NC_015061.1 382605 383303 D TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; KEGG: kva:Kvar_0389 ribosomal protein S3; SMART: KH domain protein; 30S ribosomal protein S3 382605..383303 Rahnella sp. Y9602 10211308 YP_004211106.1 CDS Rahaq_0349 NC_015061.1 383316 383726 D KEGG: ctu:Ctu_38400 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; 50S ribosomal protein L16 383316..383726 Rahnella sp. Y9602 10211309 YP_004211107.1 CDS Rahaq_0350 NC_015061.1 383726 383917 D KEGG: ctu:Ctu_38390 50S ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; 50S ribosomal protein L29 383726..383917 Rahnella sp. Y9602 10211310 YP_004211108.1 CDS Rahaq_0351 NC_015061.1 383917 384171 D KEGG: etr:ETAE_3221 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17; 30S ribosomal protein S17 383917..384171 Rahnella sp. Y9602 10211311 YP_004211109.1 CDS Rahaq_0352 NC_015061.1 384343 384714 D KEGG: spe:Spro_4534 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; 50S ribosomal protein L14 384343..384714 Rahnella sp. Y9602 10211312 YP_004211110.1 CDS Rahaq_0353 NC_015061.1 384725 385039 D TIGRFAM: ribosomal protein L24; KEGG: ebi:EbC_41190 50S ribosomal protein L24; 50S ribosomal protein L24 384725..385039 Rahnella sp. Y9602 10211313 YP_004211111.1 CDS Rahaq_0354 NC_015061.1 385054 385593 D KEGG: etr:ETAE_3218 50S ribosomal protein L5; 50S ribosomal protein L5 385054..385593 Rahnella sp. Y9602 10211314 YP_004211112.1 CDS Rahaq_0355 NC_015061.1 385607 385912 D PFAM: ribosomal protein S14; KEGG: pwa:Pecwa_3988 30S ribosomal protein S14; 30S ribosomal protein S14 385607..385912 Rahnella sp. Y9602 10211315 YP_004211113.1 CDS Rahaq_0356 NC_015061.1 385946 386338 D PFAM: ribosomal protein S8; KEGG: etr:ETAE_3216 30S ribosomal protein S8; 30S ribosomal protein S8 385946..386338 Rahnella sp. Y9602 10211316 YP_004211114.1 CDS Rahaq_0357 NC_015061.1 386352 386885 D KEGG: ypb:YPTS_3875 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain; 50S ribosomal protein L6 386352..386885 Rahnella sp. Y9602 10211317 YP_004211115.1 CDS Rahaq_0358 NC_015061.1 386895 387248 D KEGG: ent:Ent638_3735 50S ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; 50S ribosomal protein L18 386895..387248 Rahnella sp. Y9602 10211318 YP_004211116.1 CDS Rahaq_0359 NC_015061.1 387263 387763 D KEGG: pwa:Pecwa_3984 30S ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: ribosomal protein S5 domain protein; Ribosomal protein S5; 30S ribosomal protein S5 387263..387763 Rahnella sp. Y9602 10211319 YP_004211117.1 CDS Rahaq_0360 NC_015061.1 387770 387949 D KEGG: spe:Spro_4526 50S ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30; 50S ribosomal protein L30 387770..387949 Rahnella sp. Y9602 10211320 YP_004211118.1 CDS Rahaq_0361 NC_015061.1 387953 388387 D TIGRFAM: ribosomal protein L15; KEGG: ypb:YPTS_3871 50S ribosomal protein L15; 50S ribosomal protein L15 387953..388387 Rahnella sp. Y9602 10211321 YP_004211119.1 CDS Rahaq_0362 NC_015061.1 388395 389726 D KEGG: spe:Spro_4524 preprotein translocase subunit SecY; TIGRFAM: preprotein translocase SecY subunit; PFAM: SecY protein; preprotein translocase subunit SecY 388395..389726 Rahnella sp. Y9602 10211322 YP_004211120.1 CDS Rahaq_0363 NC_015061.1 389760 389876 D KEGG: sgl:SG2257 50S ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; 50S ribosomal protein L36 389760..389876 Rahnella sp. Y9602 10211323 YP_004211121.1 CDS Rahaq_0364 NC_015061.1 390025 390381 D KEGG: yen:YE3901 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13; 30S ribosomal protein S13 390025..390381 Rahnella sp. Y9602 10211324 YP_004211122.1 CDS Rahaq_0365 NC_015061.1 390399 390788 D KEGG: spe:Spro_4521 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11; 30S ribosomal protein S11 390399..390788 Rahnella sp. Y9602 10211325 YP_004211123.1 CDS Rahaq_0366 NC_015061.1 390819 391439 D TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: ddd:Dda3937_01514 30S ribosomal subunit protein S4; SMART: RNA-binding S4 domain protein; 30S ribosomal protein S4 390819..391439 Rahnella sp. Y9602 10211326 YP_004211124.1 CDS Rahaq_0367 NC_015061.1 391465 392454 D TIGRFAM: DNA-directed RNA polymerase, subunit alpha; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase subunit alpha domain protein; KEGG: spe:Spro_4519 DNA-directed RNA polymerase subunit alpha; SMART: RNA polymerase RpoA/D/Rpb3-type; DNA-directed RNA polymerase subunit alpha 391465..392454 Rahnella sp. Y9602 10211327 YP_004211125.1 CDS Rahaq_0368 NC_015061.1 392495 392884 D KEGG: spe:Spro_4518 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; 50S ribosomal protein L17 392495..392884 Rahnella sp. Y9602 10211328 YP_004211126.1 CDS Rahaq_0369 NC_015061.1 393057 393425 D PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; KEGG: kpu:KP1_5012 hypothetical protein; DnaJ family protein 393057..393425 Rahnella sp. Y9602 10211329 YP_004211127.1 CDS Rahaq_0370 NC_015061.1 393428 393844 D TIGRFAM: Zn(II)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: spe:Spro_4517 zinc-responsive transcriptional regulator; SMART: regulatory protein MerR; MerR family transcriptional regulator 393428..393844 Rahnella sp. Y9602 10211330 YP_004211128.1 CDS Rahaq_0371 NC_015061.1 393941 394141 D PFAM: protein of unknown function DUF331; KEGG: xne:XNC1_0346 hypothetical protein; hypothetical protein 393941..394141 Rahnella sp. Y9602 10211331 YP_004211129.1 CDS Rahaq_0372 NC_015061.1 394157 394573 R KEGG: spe:Spro_4515 large-conductance mechanosensitive channel; TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; large conductance mechanosensitive channel protein complement(394157..394573) Rahnella sp. Y9602 10211332 YP_004211130.1 CDS Rahaq_0373 NC_015061.1 394698 396074 R PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: spe:Spro_4514 potassium transporter peripheral membrane component; TrkA-N domain-containing protein complement(394698..396074) Rahnella sp. Y9602 10211333 YP_004211131.1 CDS Rahaq_0374 NC_015061.1 396135 397424 R KEGG: spe:Spro_4513 16S rRNA methyltransferase B; TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; sun protein complement(396135..397424) Rahnella sp. Y9602 10211334 YP_004211132.1 CDS Rahaq_0375 NC_015061.1 397500 398435 R TIGRFAM: methionyl-tRNA formyltransferase; KEGG: yen:YE3890 methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; methionyl-tRNA formyltransferase complement(397500..398435) Rahnella sp. Y9602 10211335 YP_004211133.1 CDS Rahaq_0376 NC_015061.1 398461 398973 R KEGG: yen:YE3889 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase complement(398461..398973) Rahnella sp. Y9602 10211336 YP_004211134.1 CDS Rahaq_0377 NC_015061.1 399102 400271 D KEGG: dda:Dd703_0440 DNA protecting protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; DNA protecting protein DprA 399102..400271 Rahnella sp. Y9602 10211337 YP_004211135.1 CDS Rahaq_0378 NC_015061.1 400243 400716 D PFAM: protein of unknown function DUF494; KEGG: spe:Spro_4509 hypothetical protein; hypothetical protein 400243..400716 Rahnella sp. Y9602 10211338 YP_004211136.1 CDS Rahaq_0379 NC_015061.1 400741 401301 D PFAM: DNA topoisomerase type IA zn finger domain protein; KEGG: yen:YE3886 DNA-binding protein; DNA topoisomerase type IA zn finger domain-containing protein 400741..401301 Rahnella sp. Y9602 10211339 YP_004211137.1 CDS Rahaq_0380 NC_015061.1 401294 401863 D PFAM: SUA5/yciO/yrdC domain; KEGG: eca:ECA3996 DNA topoisomerase; SUA5/yciO/yrdC domain-containing protein 401294..401863 Rahnella sp. Y9602 10211340 YP_004211138.1 CDS Rahaq_0381 NC_015061.1 401867 402694 D KEGG: yen:YE3884 shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; shikimate 5-dehydrogenase 401867..402694 Rahnella sp. Y9602 10211341 YP_004211139.1 CDS Rahaq_0382 NC_015061.1 402746 403288 R KEGG: ebi:EbC_40910 transferase; transferase complement(402746..403288) Rahnella sp. Y9602 10211342 YP_004211140.1 CDS Rahaq_0383 NC_015061.1 409476 411143 R KEGG: spe:Spro_0295 acetate permease; TIGRFAM: cation/acetate symporter ActP; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; cation/acetate symporter ActP complement(409476..411143) Rahnella sp. Y9602 10211350 YP_004211141.1 CDS Rahaq_0384 NC_015061.1 411140 411451 R PFAM: protein of unknown function DUF485; KEGG: yen:YE0308 hypothetical protein; hypothetical protein complement(411140..411451) Rahnella sp. Y9602 10211351 YP_004211142.1 CDS Rahaq_0385 NC_015061.1 411507 413468 R KEGG: spe:Spro_0297 acetyl-CoA synthetase; TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase; acetate/CoA ligase complement(411507..413468) Rahnella sp. Y9602 10211352 YP_004211143.1 CDS Rahaq_0386 NC_015061.1 413984 414562 D PFAM: Fimbrial protein domain-containing protein; KEGG: ypi:YpsIP31758_4107 fimbrial protein; fimbrial protein domain-containing protein 413984..414562 Rahnella sp. Y9602 10211353 YP_004211144.1 CDS Rahaq_0387 NC_015061.1 414664 417165 D PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: yps:YPTB3895 outer membrane fimbrial usher porin; fimbrial biogenesis outer membrane usher protein 414664..417165 Rahnella sp. Y9602 10211354 YP_004211145.1 CDS Rahaq_0388 NC_015061.1 417212 417949 D PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: ypb:YPTS_4111 pili assembly chaperone, N-terminal; Pili assembly chaperone, N-terminal protein 417212..417949 Rahnella sp. Y9602 10211355 YP_004211146.1 CDS Rahaq_0389 NC_015061.1 417959 418930 D KEGG: ypi:YpsIP31758_4104 hypothetical protein; hypothetical protein 417959..418930 Rahnella sp. Y9602 10211356 YP_004211147.1 CDS Rahaq_0390 NC_015061.1 418958 419230 D KEGG: plu:plu0900 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 418958..419230 Rahnella sp. Y9602 10211357 YP_004211148.1 CDS Rahaq_0391 NC_015061.1 419255 419812 R KEGG: pfh:PFHG_01390 conserved hypothetical protein; hypothetical protein complement(419255..419812) Rahnella sp. Y9602 10211358 YP_004211149.1 CDS Rahaq_0392 NC_015061.1 419802 420683 R PFAM: transcriptional regulator domain-containing protein; KEGG: spe:Spro_1500 transcriptional regulator, CadC; CadC family transcriptional regulator complement(419802..420683) Rahnella sp. Y9602 10211359 YP_004211150.1 CDS Rahaq_0393 NC_015061.1 420932 421960 R PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: dze:Dd1591_1452 peptidase U61 LD-carboxypeptidase A; peptidase U61 LD-carboxypeptidase A complement(420932..421960) Rahnella sp. Y9602 10211360 YP_004211151.1 CDS Rahaq_0394 NC_015061.1 422052 423368 R PFAM: major facilitator superfamily MFS_1; KEGG: bmj:BMULJ_06130 sugar transporter; major facilitator superfamily protein complement(422052..423368) Rahnella sp. Y9602 10211361 YP_004211152.1 CDS Rahaq_0395 NC_015061.1 423361 424521 R PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bmj:BMULJ_06131 mandelate racemase (MR)-like subfamily protein of the enolase superfamily; mandelate racemase/muconate lactonizing protein complement(423361..424521) Rahnella sp. Y9602 10211362 YP_004211153.1 CDS Rahaq_0396 NC_015061.1 424948 425523 R KEGG: yen:YE0346 transcriptional regulator; transcriptional regulator complement(424948..425523) Rahnella sp. Y9602 10211364 YP_004211154.1 CDS Rahaq_0397 NC_015061.1 425567 427303 R KEGG: spe:Spro_0403 thiol:disulfide interchange protein precursor; PFAM: cytochrome c biogenesis protein transmembrane region; Thioredoxin domain-containing protein; Protein-disulfide reductase complement(425567..427303) Rahnella sp. Y9602 10211365 YP_004211155.1 CDS Rahaq_0398 NC_015061.1 427474 428775 R KEGG: spe:Spro_0405 anaerobic C4-dicarboxylate transporter; TIGRFAM: anaerobic c4-dicarboxylate antiporter, Dcu family; PFAM: anaerobic c4-dicarboxylate membrane transporter; anaerobic C4-dicarboxylate transporter complement(427474..428775) Rahnella sp. Y9602 10211366 YP_004211156.1 CDS Rahaq_0399 NC_015061.1 428911 430347 R KEGG: spe:Spro_0406 aspartate ammonia-lyase; TIGRFAM: aspartate ammonia-lyase; PFAM: fumarate lyase; Fumarase C-like; aspartate ammonia-lyase complement(428911..430347) Rahnella sp. Y9602 10211367 YP_004211157.1 CDS Rahaq_0400 NC_015061.1 430721 431212 D PFAM: FxsA cytoplasmic membrane protein; KEGG: spe:Spro_0407 FxsA cytoplasmic membrane protein; FxsA cytoplasmic membrane protein 430721..431212 Rahnella sp. Y9602 10211368 YP_004211158.1 CDS Rahaq_0401 NC_015061.1 431427 431720 D PFAM: Chaperonin Cpn10; KEGG: dze:Dd1591_3530 co-chaperonin GroES; chaperonin Cpn10 431427..431720 Rahnella sp. Y9602 10211369 YP_004211159.1 CDS Rahaq_0402 NC_015061.1 431774 433420 D KEGG: ypb:YPTS_0431 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; molecular chaperone GroEL 431774..433420 Rahnella sp. Y9602 10211370 YP_004211160.1 CDS Rahaq_0403 NC_015061.1 433709 434065 D manually curated; KEGG: spe:Spro_0410 hypothetical protein; hypothetical protein 433709..434065 Rahnella sp. Y9602 10211371 YP_004211161.1 CDS Rahaq_0405 NC_015061.1 434254 435282 R TIGRFAM: lysine 2,3-aminomutase YodO family protein; KEGG: ypi:YpsIP31758_3673 KamA family iron-sulfur cluster-binding protein; PFAM: Radical SAM domain protein; lysine 2,3-aminomutase YodO family protein complement(434254..435282) Rahnella sp. Y9602 10211373 YP_004211162.1 CDS Rahaq_0406 NC_015061.1 435321 435887 D KEGG: spe:Spro_0412 elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor KOW-like domain-containing protein; Elongation factor P/YeiP protein; translation elongation factor P 435321..435887 Rahnella sp. Y9602 10211374 YP_004211163.1 CDS Rahaq_0407 NC_015061.1 435983 436111 D PFAM: Entericidin EcnAB; KEGG: spe:Spro_0413 entericidin EcnAB; entericidin EcnAB 435983..436111 Rahnella sp. Y9602 10211375 YP_004211164.1 CDS Rahaq_0408 NC_015061.1 436230 436364 D PFAM: Entericidin EcnAB; KEGG: ebi:EbC_04350 entericidin B; entericidin EcnAB 436230..436364 Rahnella sp. Y9602 10211376 YP_004211165.1 CDS Rahaq_0409 NC_015061.1 436454 436978 R PFAM: Lipocalin family protein; KEGG: yen:YE0360 outer membrane lipoprotein Blc; lipocalin family protein complement(436454..436978) Rahnella sp. Y9602 10211377 YP_004211166.1 CDS Rahaq_0410 NC_015061.1 437103 437462 R PFAM: fumarate reductase D subunit; KEGG: sbo:SBO_4305 fumarate reductase subunit D; fumarate reductase D subunit complement(437103..437462) Rahnella sp. Y9602 10211378 YP_004211167.1 CDS Rahaq_0411 NC_015061.1 437472 437882 R PFAM: fumarate reductase subunit C; KEGG: esa:ESA_00163 fumarate reductase subunit C; fumarate reductase subunit C complement(437472..437882) Rahnella sp. Y9602 10211379 YP_004211168.1 CDS Rahaq_0412 NC_015061.1 437894 438628 R KEGG: ddd:Dda3937_02146 fumarate reductase (anaerobic), Fe-S subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; succinate dehydrogenase and fumarate reductase iron-sulfur protein complement(437894..438628) Rahnella sp. Y9602 10211380 YP_004211169.1 CDS Rahaq_0413 NC_015061.1 438621 440420 R KEGG: spe:Spro_0419 fumarate reductase flavoprotein subunit; TIGRFAM: fumarate reductase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; fumarate reductase flavoprotein subunit complement(438621..440420) Rahnella sp. Y9602 10211381 YP_004211170.1 CDS Rahaq_0414 NC_015061.1 440704 441681 D KEGG: spe:Spro_0420 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase-related protein GenX; PFAM: tRNA synthetase class II (D K and N); lysyl-tRNA synthetase-like protein GenX 440704..441681 Rahnella sp. Y9602 10211382 YP_004211171.1 CDS Rahaq_0415 NC_015061.1 441947 443311 D KEGG: ebi:EbC_00110 purine permease; TIGRFAM: xanthine permease; uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; xanthine permease 441947..443311 Rahnella sp. Y9602 10211383 YP_004211172.1 CDS Rahaq_0416 NC_015061.1 443406 444764 D KEGG: ebi:EbC_00100 amidohydrolase; PFAM: amidohydrolase; S-adenosylhomocysteine deaminase 443406..444764 Rahnella sp. Y9602 10211384 YP_004211173.1 CDS Rahaq_0417 NC_015061.1 444833 448201 R PFAM: MscS Mechanosensitive ion channel; KEGG: yps:YPTB0415 hypothetical protein; mechanosensitive ion channel protein MscS complement(444833..448201) Rahnella sp. Y9602 10211385 YP_004211174.1 CDS Rahaq_0418 NC_015061.1 448249 449226 R KEGG: spe:Spro_0422 phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related; phosphatidylserine decarboxylase complement(448249..449226) Rahnella sp. Y9602 10211386 YP_004211175.1 CDS Rahaq_0419 NC_015061.1 449409 450446 R KEGG: spe:Spro_0423 ribosome-associated GTPase; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; ribosome small subunit-dependent GTPase A complement(449409..450446) Rahnella sp. Y9602 10211387 YP_004211176.1 CDS Rahaq_0420 NC_015061.1 450573 451127 D KEGG: yen:YE0369 oligoribonuclease; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; Exonuclease RNase T and DNA polymerase III 450573..451127 Rahnella sp. Y9602 10211388 YP_004211177.1 CDS Rahaq_0421 NC_015061.1 451972 453126 R manually curated; TIGRFAM: iron-sulfur cluster binding protein; KEGG: spe:Spro_0425 iron-sulfur cluster binding protein; PFAM: domain of unknown function DUF1730; iron-sulfur cluster binding protein complement(451972..453126) Rahnella sp. Y9602 10211392 YP_004211178.1 CDS Rahaq_0422 NC_015061.1 453125 454639 D KEGG: stm:STM4356 ATP binding site; other site; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain-containing protein; carbohydrate kinase 453125..454639 Rahnella sp. Y9602 10211393 YP_004211179.1 CDS Rahaq_0423 NC_015061.1 454650 455117 D PFAM: Uncharacterised protein family UPF0079, ATPase; KEGG: spe:Spro_0427 ATPase; hypothetical protein 454650..455117 Rahnella sp. Y9602 10211394 YP_004211180.1 CDS Rahaq_0424 NC_015061.1 455125 456891 D KEGG: ypz:YPZ3_0369 N-acetylmuramoyl-L-alanine amidase-family protein; PFAM: cell wall hydrolase/autolysin; Peptidoglycan-binding lysin domain; SMART: cell wall hydrolase/autolysin; Peptidoglycan-binding LysM; cell wall hydrolase/autolysin 455125..456891 Rahnella sp. Y9602 10211395 YP_004211181.1 CDS Rahaq_0425 NC_015061.1 456923 458842 D KEGG: spe:Spro_0429 DNA mismatch repair protein; TIGRFAM: DNA mismatch repair protein MutL; PFAM: DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; MutL dimerisation; DNA mismatch repair protein MutL 456923..458842 Rahnella sp. Y9602 10211396 YP_004211182.1 CDS Rahaq_0426 NC_015061.1 458835 459776 D TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: spe:Spro_0430 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase 458835..459776 Rahnella sp. Y9602 10211397 YP_004211183.1 CDS Rahaq_0427 NC_015061.1 459891 460199 D KEGG: yen:YE0377 RNA-binding protein Hfq; TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; RNA chaperone Hfq 459891..460199 Rahnella sp. Y9602 10211398 YP_004211184.1 CDS Rahaq_0428 NC_015061.1 460298 461602 D KEGG: spe:Spro_0432 GTPase HflX; TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; GTP-binding protein HflX 460298..461602 Rahnella sp. Y9602 10211399 YP_004211185.1 CDS Rahaq_0429 NC_015061.1 461636 462934 D TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: spe:Spro_0433 FtsH protease regulator HflK; SMART: band 7 protein; HflK protein 461636..462934 Rahnella sp. Y9602 10211400 YP_004211186.1 CDS Rahaq_0430 NC_015061.1 462937 463935 D TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: yen:YE0380 FtsH protease regulator HflC; SMART: band 7 protein; HflC protein 462937..463935 Rahnella sp. Y9602 10211401 YP_004211187.1 CDS Rahaq_0431 NC_015061.1 464033 464233 D PFAM: Protein of unknown function DUF2065; KEGG: pwa:Pecwa_3915 protein of unknown function DUF2065; hypothetical protein 464033..464233 Rahnella sp. Y9602 10211402 YP_004211188.1 CDS Rahaq_0432 NC_015061.1 464378 465676 D SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: spe:Spro_0436 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; adenylosuccinate synthetase 464378..465676 Rahnella sp. Y9602 10211403 YP_004211189.1 CDS Rahaq_0433 NC_015061.1 465904 466329 D KEGG: ypb:YPTS_0460 transcriptional repressor NsrR; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; BadM/Rrf2 family transcriptional regulator 465904..466329 Rahnella sp. Y9602 10211404 YP_004211190.1 CDS Rahaq_0434 NC_015061.1 466371 468869 D TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: ribonuclease II; Ribonuclease B OB region domain; Ribonuclease R winged-helix domain protein; RNA binding S1 domain protein; KEGG: yen:YE0384 exoribonuclease R; SMART: Cold shock protein; ribonuclease R 466371..468869 Rahnella sp. Y9602 10211405 YP_004211191.1 CDS Rahaq_0435 NC_015061.1 468890 469705 D KEGG: yen:YE0385 23S rRNA (guanosine-2'-O-)-methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; TrmH family RNA methyltransferase 468890..469705 Rahnella sp. Y9602 10211406 YP_004211192.1 CDS Rahaq_0436 NC_015061.1 469842 471473 D PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: spe:Spro_0440 isovaleryl CoA dehydrogenase; acyl-CoA dehydrogenase 469842..471473 Rahnella sp. Y9602 10211407 YP_004211193.1 CDS Rahaq_0437 NC_015061.1 471474 471785 R PFAM: protein of unknown function DUF1471; KEGG: spe:Spro_0443 biofilm stress and motility protein A; hypothetical protein complement(471474..471785) Rahnella sp. Y9602 10211408 YP_004211194.1 CDS Rahaq_0438 NC_015061.1 471882 473831 R KEGG: pct:PC1_3437 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer complement(471882..473831) Rahnella sp. Y9602 10211409 YP_004211195.1 CDS Rahaq_0439 NC_015061.1 474111 474860 D PFAM: phospholipase/Carboxylesterase; KEGG: ypi:YpsIP31758_3640 esterase; phospholipase/Carboxylesterase 474111..474860 Rahnella sp. Y9602 10211410 YP_004211196.1 CDS Rahaq_0440 NC_015061.1 475011 475403 D KEGG: eca:ECA3613 30S ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like; 30S ribosomal protein S6 475011..475403 Rahnella sp. Y9602 10211411 YP_004211197.1 CDS Rahaq_0441 NC_015061.1 475409 475726 D KEGG: dda:Dd703_0795 primosomal replication protein N; manually curated; PFAM: single-strand binding protein/Primosomal replication protein n; ssDNA-binding protein 475409..475726 Rahnella sp. Y9602 10211412 YP_004211198.1 CDS Rahaq_0442 NC_015061.1 475731 475958 D KEGG: spe:Spro_0448 30S ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18; 30S ribosomal protein S18 475731..475958 Rahnella sp. Y9602 10211413 YP_004211199.1 CDS Rahaq_0443 NC_015061.1 475998 476450 D KEGG: spe:Spro_0449 50S ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9-like; 50S ribosomal protein L9 475998..476450 Rahnella sp. Y9602 10211414 YP_004211200.1 CDS Rahaq_0444 NC_015061.1 476538 477248 R PFAM: Opacity-associated protein A domain protein; KEGG: spe:Spro_0451 opacity-associated protein A; Opacity-associated protein A domain protein complement(476538..477248) Rahnella sp. Y9602 10211415 YP_004211201.1 CDS Rahaq_0445 NC_015061.1 477504 478124 D PFAM: peptidylprolyl isomerase FKBP-type; FKBP-type peptidyl-prolyl isomerase domain protein; KEGG: pct:PC1_3428 peptidyl-prolyl cis-trans isomerase; FKBP-type peptidylprolyl isomerase 477504..478124 Rahnella sp. Y9602 10211416 YP_004211202.1 CDS Rahaq_0446 NC_015061.1 478190 478855 R KEGG: ypy:YPK_3777 iron-sulfur cluster repair di-iron protein; TIGRFAM: iron-sulfur cluster repair di-iron protein; PFAM: protein of unknown function DUF542 ScdA domain protein; Hemerythrin HHE cation binding domain protein; iron-sulfur cluster repair di-iron protein complement(478190..478855) Rahnella sp. Y9602 10211417 YP_004211203.1 CDS Rahaq_0447 NC_015061.1 478979 480928 R KEGG: spe:Spro_0453 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; TIGRFAM: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; PFAM: 5'-Nucleotidase domain-containing protein; metallophosphoesterase; 2',3'-cyclic-nucleotide 2'-phosphodiesterase complement(478979..480928) Rahnella sp. Y9602 10211418 YP_004211204.1 CDS Rahaq_0448 NC_015061.1 481127 481873 D KEGG: dze:Dd1591_0784 adenosine-3'(2'),5'-bisphosphate nucleotidase; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; 3'(2'),5'-bisphosphate nucleotidase 481127..481873 Rahnella sp. Y9602 10211419 YP_004211205.1 CDS Rahaq_0449 NC_015061.1 481909 482466 R PFAM: Conserved hypothetical protein, YtfJ; KEGG: spe:Spro_0455 hypothetical protein; hypothetical protein complement(481909..482466) Rahnella sp. Y9602 10211420 YP_004211206.1 CDS Rahaq_0450 NC_015061.1 482776 482982 D PFAM: protein of unknown function DUF1107; KEGG: spe:Spro_0456 hypothetical protein; hypothetical protein 482776..482982 Rahnella sp. Y9602 10211421 YP_004211207.1 CDS Rahaq_0451 NC_015061.1 483096 484445 R PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: yen:YE0403 hypothetical protein; hypothetical protein complement(483096..484445) Rahnella sp. Y9602 10211422 YP_004211208.1 CDS Rahaq_0452 NC_015061.1 484673 485311 R TIGRFAM: peptide methionine sulfoxide reductase; KEGG: spe:Spro_0458 methionine sulfoxide reductase A; PFAM: methionine sulfoxide reductase A; peptide methionine sulfoxide reductase complement(484673..485311) Rahnella sp. Y9602 10211423 YP_004211209.1 CDS Rahaq_0453 NC_015061.1 485581 487317 D PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; KEGG: spe:Spro_0459 surface antigen (D15); surface antigen (D15) 485581..487317 Rahnella sp. Y9602 10211424 YP_004211210.1 CDS Rahaq_0454 NC_015061.1 487314 491129 D PFAM: protein of unknown function DUF490; KEGG: spe:Spro_0460 hypothetical protein; hypothetical protein 487314..491129 Rahnella sp. Y9602 10211425 YP_004211211.1 CDS Rahaq_0455 NC_015061.1 491161 491514 D PFAM: AIG2 family protein; KEGG: etr:ETAE_0379 hypothetical protein; AIG2 family protein 491161..491514 Rahnella sp. Y9602 10211426 YP_004211212.1 CDS Rahaq_0456 NC_015061.1 491616 492146 R KEGG: etr:ETAE_0380 inorganic pyrophosphatase; PFAM: inorganic pyrophosphatase; inorganic diphosphatase complement(491616..492146) Rahnella sp. Y9602 10211427 YP_004211213.1 CDS Rahaq_0457 NC_015061.1 492301 492420 R hypothetical protein complement(492301..492420) Rahnella sp. Y9602 10211428 YP_004211214.1 CDS Rahaq_0458 NC_015061.1 492463 494034 D KEGG: spe:Spro_0463 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 492463..494034 Rahnella sp. Y9602 10211429 YP_004211215.1 CDS Rahaq_0459 NC_015061.1 494158 495162 R KEGG: pay:PAU_04051 fructose-1,6-bisphosphatase (d-fructose-1,6-bisphosphate 1 phosphohydrolase) (fbpase); PFAM: Inositol phosphatase/fructose-16-bisphosphatase; fructose-bisphosphatase complement(494158..495162) Rahnella sp. Y9602 10211430 YP_004211216.1 CDS Rahaq_0460 NC_015061.1 495330 496715 D KEGG: spe:Spro_0465 UDP-N-acetylmuramate; TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; UDP-N-acetylmuramate--L-alanine ligase 495330..496715 Rahnella sp. Y9602 10211431 YP_004211217.1 CDS Rahaq_0461 NC_015061.1 497014 497286 R PFAM: protein of unknown function DUF1471; KEGG: pam:PANA_3550 YhcN; hypothetical protein complement(497014..497286) Rahnella sp. Y9602 10211432 YP_004211218.1 CDS Rahaq_0462 NC_015061.1 497357 497458 R hypothetical protein complement(497357..497458) Rahnella sp. Y9602 10211433 YP_004211219.1 CDS Rahaq_0463 NC_015061.1 497488 497751 R PFAM: protein of unknown function DUF1471; KEGG: yen:YE0412 hypothetical protein; hypothetical protein complement(497488..497751) Rahnella sp. Y9602 10211434 YP_004211220.1 CDS Rahaq_0464 NC_015061.1 498202 498672 R KEGG: ypb:YPTS_0489 arginine repressor; TIGRFAM: arginine repressor; PFAM: Arginine repressor-like; arginine repressor ArgR complement(498202..498672) Rahnella sp. Y9602 10211435 YP_004211221.1 CDS Rahaq_0465 NC_015061.1 499137 500075 D KEGG: ypb:YPTS_0490 malate dehydrogenase; TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: Lactate/malate dehydrogenase; malate dehydrogenase 499137..500075 Rahnella sp. Y9602 10211436 YP_004211222.1 CDS Rahaq_0466 NC_015061.1 500119 500391 R KEGG: ddc:Dd586_0582 transcriptional regulator, Nlp; Nlp family transcriptional regulator complement(500119..500391) Rahnella sp. Y9602 10211437 YP_004211223.1 CDS Rahaq_0467 NC_015061.1 501052 501411 D PFAM: MuA-transposase/repressor protein CI DNA-binding; KEGG: ypb:YPTS_0492 MuA-transposase/repressor protein CI DNA-binding; MuA-transposase/repressor protein CI DNA-binding protein 501052..501411 Rahnella sp. Y9602 10211438 YP_004211224.1 CDS Rahaq_0468 NC_015061.1 501465 502436 R KEGG: pwa:Pecwa_0792 octaprenyl diphosphate synthase; manually curated; PFAM: Polyprenyl synthetase; polyprenyl synthetase complement(501465..502436) Rahnella sp. Y9602 10211439 YP_004211225.1 CDS Rahaq_0469 NC_015061.1 502696 503007 D KEGG: yen:YE0418 50S ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; 50S ribosomal protein L21 502696..503007 Rahnella sp. Y9602 10211440 YP_004211226.1 CDS Rahaq_0470 NC_015061.1 503026 503283 D KEGG: ypb:YPTS_0495 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; 50S ribosomal protein L27 503026..503283 Rahnella sp. Y9602 10211441 YP_004211227.1 CDS Rahaq_0471 NC_015061.1 503369 504325 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: ypb:YPTS_0496 hypothetical protein; hypothetical protein 503369..504325 Rahnella sp. Y9602 10211442 YP_004211228.1 CDS Rahaq_0472 NC_015061.1 504359 505531 D KEGG: spe:Spro_0476 GTPase ObgE; TIGRFAM: GTP-binding protein Obg/CgtA; small GTP-binding protein; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; GTP-binding protein Obg/CgtA 504359..505531 Rahnella sp. Y9602 10211443 YP_004211229.1 CDS Rahaq_0473 NC_015061.1 505660 506982 D PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein; transposase IS4 family protein 505660..506982 Rahnella sp. Y9602 10211444 YP_004211230.1 CDS Rahaq_0474 NC_015061.1 507041 508132 R KEGG: spe:Spro_0477 sensor protein BasS/PmrB; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase complement(507041..508132) Rahnella sp. Y9602 10211445 YP_004211231.1 CDS Rahaq_0475 NC_015061.1 508129 508791 R KEGG: spe:Spro_0478 DNA-binding transcriptional regulator BasR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator complement(508129..508791) Rahnella sp. Y9602 10211446 YP_004211232.1 CDS Rahaq_0476 NC_015061.1 508812 510245 R TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; KEGG: spe:Spro_0479 D-alanyl-D-alanine carboxypeptidase/endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase complement(508812..510245) Rahnella sp. Y9602 10211447 YP_004211233.1 CDS Rahaq_0477 NC_015061.1 510527 511003 D KEGG: pct:PC1_0563 transcription elongation factor GreA; TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain-containing protein; transcription elongation factor GreA 510527..511003 Rahnella sp. Y9602 10211448 YP_004211234.1 CDS Rahaq_0478 NC_015061.1 511184 511480 R PFAM: protein of unknown function UPF0044; KEGG: spe:Spro_0481 hypothetical protein; hypothetical protein complement(511184..511480) Rahnella sp. Y9602 10211449 YP_004211235.1 CDS Rahaq_0479 NC_015061.1 511663 512292 D KEGG: yen:YE0427 23S rRNA methyltransferase J; TIGRFAM: ribosomal RNA large subunit methyltransferase J; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; ribosomal RNA large subunit methyltransferase J 511663..512292 Rahnella sp. Y9602 10211450 YP_004211236.1 CDS Rahaq_0480 NC_015061.1 512340 514292 D SMART: AAA ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: spe:Spro_0483 ATP-dependent metalloprotease; PFAM: peptidase M41; AAA ATPase; ATP-dependent metalloprotease FtsH 512340..514292 Rahnella sp. Y9602 10211451 YP_004211237.1 CDS Rahaq_0481 NC_015061.1 514417 515256 D TIGRFAM: dihydropteroate synthase; KEGG: yen:YE0429 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase 514417..515256 Rahnella sp. Y9602 10211452 YP_004211238.1 CDS Rahaq_0482 NC_015061.1 515259 516599 D KEGG: pwa:Pecwa_0803 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucosamine mutase 515259..516599 Rahnella sp. Y9602 10211453 YP_004211239.1 CDS Rahaq_0483 NC_015061.1 516835 517170 D KEGG: yen:YE0431 preprotein translocase subunit SecG; TIGRFAM: preprotein translocase SecG subunit; PFAM: Preprotein translocase SecG subunit; preprotein translocase subunit SecG 516835..517170 Rahnella sp. Y9602 10211454 YP_004211240.1 CDS Rahaq_0485 NC_015061.1 518170 519678 D KEGG: spe:Spro_0488 transcription elongation factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: NusA domain-containing protein; RNA binding S1 domain protein; NusA antitermination factor 518170..519678 Rahnella sp. Y9602 10211458 YP_004211241.1 CDS Rahaq_0486 NC_015061.1 519703 522396 D KEGG: ypb:YPTS_0510 translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; Initiation factor 2 associated domain protein ; translation initiation factor IF-2 domain-containing protein; elongation factor Tu domain 2 protein; translation initiation factor IF-2 519703..522396 Rahnella sp. Y9602 10211459 YP_004211242.1 CDS Rahaq_0487 NC_015061.1 522476 522889 D KEGG: spe:Spro_0490 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A; ribosome-binding factor A 522476..522889 Rahnella sp. Y9602 10211460 YP_004211243.1 CDS Rahaq_0488 NC_015061.1 522889 523833 D KEGG: spe:Spro_0491 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B; tRNA pseudouridine synthase B 522889..523833 Rahnella sp. Y9602 10211461 YP_004211244.1 CDS Rahaq_0489 NC_015061.1 523956 524225 D KEGG: cko:CKO_04564 30S ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15; 30S ribosomal protein S15 523956..524225 Rahnella sp. Y9602 10211462 YP_004211245.1 CDS Rahaq_0490 NC_015061.1 524655 526778 D SMART: KH domain protein; TIGRFAM: polyribonucleotide nucleotidyltransferase; KEGG: spe:Spro_0493 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding; K Homology, type 1, subgroup; RNA binding S1 domain protein; polyribonucleotide nucleotidyltransferase 524655..526778 Rahnella sp. Y9602 10211463 YP_004211246.1 CDS Rahaq_0491 NC_015061.1 526908 527792 D KEGG: spe:Spro_0494 lipoprotein NlpI; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; hypothetical protein 526908..527792 Rahnella sp. Y9602 10211464 YP_004211247.1 CDS Rahaq_0492 NC_015061.1 527977 529899 D KEGG: spe:Spro_0495 ATP-dependent RNA helicase DeaD; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase 527977..529899 Rahnella sp. Y9602 10211465 YP_004211248.1 CDS Rahaq_0493 NC_015061.1 529986 531011 R KEGG: spe:Spro_0498 hypothetical protein; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: luciferase; luciferase family oxidoreductase complement(529986..531011) Rahnella sp. Y9602 10211466 YP_004211249.1 CDS Rahaq_0494 NC_015061.1 531229 532203 D PFAM: secretion protein HlyD family protein; KEGG: spe:Spro_0499 secretion protein HlyD family protein; secretion protein HlyD family protein 531229..532203 Rahnella sp. Y9602 10211467 YP_004211250.1 CDS Rahaq_0495 NC_015061.1 532200 533372 D PFAM: ABC transporter; KEGG: spe:Spro_0500 ABC transporter; ABC transporter 532200..533372 Rahnella sp. Y9602 10211468 YP_004211251.1 CDS Rahaq_0496 NC_015061.1 533369 534532 D PFAM: ABC transporter; KEGG: spe:Spro_0501 ABC transporter; ABC transporter 533369..534532 Rahnella sp. Y9602 10211469 YP_004211252.1 CDS Rahaq_0497 NC_015061.1 534585 535463 R PFAM: peptidase U32; KEGG: yen:YE0449 hypothetical protein; peptidase U32 complement(534585..535463) Rahnella sp. Y9602 10211470 YP_004211253.1 CDS Rahaq_0498 NC_015061.1 535478 536473 R PFAM: peptidase U32; KEGG: cko:CKO_04553 hypothetical protein; peptidase U32 complement(535478..536473) Rahnella sp. Y9602 10211471 YP_004211254.1 CDS Rahaq_0499 NC_015061.1 536789 537310 D PFAM: Sterol-binding domain protein; KEGG: spe:Spro_0505 sterol-binding domain-containing protein; Sterol-binding domain-containing protein 536789..537310 Rahnella sp. Y9602 10211472 YP_004211255.1 CDS Rahaq_0500 NC_015061.1 537304 537807 D PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE0452 acetyltransferase; N-acetyltransferase GCN5 537304..537807 Rahnella sp. Y9602 10211473 YP_004211256.1 CDS Rahaq_0501 NC_015061.1 537848 538150 R PFAM: Excinuclease ABC C subunit domain protein; KEGG: yen:YE0453 GIY-YIG nuclease superfamily protein; Excinuclease ABC C subunit domain-containing protein complement(537848..538150) Rahnella sp. Y9602 10211474 YP_004211257.1 CDS Rahaq_0502 NC_015061.1 538266 538700 D KEGG: spe:Spro_0510 hypothetical protein; hypothetical protein 538266..538700 Rahnella sp. Y9602 10211475 YP_004211258.1 CDS Rahaq_0503 NC_015061.1 538806 539447 D PFAM: Semialdehyde dehydrogenase NAD - binding; KEGG: spe:Spro_0511 hypothetical protein; semialdehyde dehydrogenase NAD-binding protein 538806..539447 Rahnella sp. Y9602 10211476 YP_004211259.1 CDS Rahaq_0504 NC_015061.1 539546 540184 R TIGRFAM: phosphonate metabolim protein, transferase hexapeptide repeat family; KEGG: spe:Spro_0513 acetyltransferase (virginiamycin, streptogramin A, chloramphenicol); phosphonate metabolism protein complement(539546..540184) Rahnella sp. Y9602 10211477 YP_004211260.1 CDS Rahaq_0505 NC_015061.1 540193 540768 R KEGG: ebi:EbC_27490 ribose 1,5-bisphosphokinase; TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region; phosphonate metabolism protein/1,5-bisphosphokinase PhnN complement(540193..540768) Rahnella sp. Y9602 10211478 YP_004211261.1 CDS Rahaq_0506 NC_015061.1 540844 541980 R KEGG: spe:Spro_0515 phosphonate metabolism protein PhnM; TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase; phosphonate metabolism protein PhnM complement(540844..541980) Rahnella sp. Y9602 10211479 YP_004211262.1 CDS Rahaq_0507 NC_015061.1 541977 542684 R TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; KEGG: spe:Spro_0516 phosphonate C-P lyase system protein PhnL; SMART: AAA ATPase; phosphonate C-P lyase system protein PhnL complement(541977..542684) Rahnella sp. Y9602 10211480 YP_004211263.1 CDS Rahaq_0508 NC_015061.1 542713 543504 R TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: spe:Spro_0517 phosphonate C-P lyase system protein PhnK; SMART: AAA ATPase; phosphonate C-P lyase system protein PhnK complement(542713..543504) Rahnella sp. Y9602 10211481 YP_004211264.1 CDS Rahaq_0509 NC_015061.1 543504 544379 R PFAM: phosphonate metabolism PhnJ; KEGG: pam:PANA_2395 PhnJ; phosphonate metabolism PhnJ complement(543504..544379) Rahnella sp. Y9602 10211482 YP_004211265.1 CDS Rahaq_0510 NC_015061.1 544369 545451 R PFAM: phosphonate metabolism; KEGG: spe:Spro_0519 phosphonate metabolism; phosphonate metabolism protein complement(544369..545451) Rahnella sp. Y9602 10211483 YP_004211266.1 CDS Rahaq_0511 NC_015061.1 545451 546032 R KEGG: pct:PC1_0888 phosphonate C-P lyase system protein PhnH; TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism; phosphonate C-P lyase system protein PhnH complement(545451..546032) Rahnella sp. Y9602 10211484 YP_004211267.1 CDS Rahaq_0512 NC_015061.1 546036 546479 R KEGG: spe:Spro_0521 phosphonate metabolism PhnG; TIGRFAM: phosphonate C-P lyase system protein PhnG; PFAM: phosphonate metabolism PhnG; phosphonate C-P lyase system protein PhnG complement(546036..546479) Rahnella sp. Y9602 10211485 YP_004211268.1 CDS Rahaq_0513 NC_015061.1 546480 547205 R TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; KEGG: spe:Spro_0522 phosphonate metabolism transcriptional regulator PhnF; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(546480..547205) Rahnella sp. Y9602 10211486 YP_004211269.1 CDS Rahaq_0514 NC_015061.1 547513 547854 D PFAM: protein of unknown function DUF891; KEGG: eum:ECUMN_2400 hypothetical protein; hypothetical protein 547513..547854 Rahnella sp. Y9602 10211487 YP_004211270.1 CDS Rahaq_0515 NC_015061.1 547838 548125 D KEGG: eba:ebA101 hypothetical protein; XRE family transcriptional regulator 547838..548125 Rahnella sp. Y9602 10211488 YP_004211271.1 CDS Rahaq_0516 NC_015061.1 548246 548407 D KEGG: yen:YE3481 gyrase inhibitor antitoxin; hypothetical protein 548246..548407 Rahnella sp. Y9602 10211489 YP_004211272.1 CDS Rahaq_0517 NC_015061.1 548442 548906 R KEGG: pct:PC1_0359 anaerobic ribonucleotide reductase-activating protein; manually curated; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; anaerobic ribonucleoside-triphosphate reductase activating protein complement(548442..548906) Rahnella sp. Y9602 10211490 YP_004211273.1 CDS Rahaq_0518 NC_015061.1 548911 551094 R TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; KEGG: spe:Spro_0525 anaerobic ribonucleoside triphosphate reductase; PFAM: formate C-acetyltransferase glycine radical; ATP-cone domain protein; anaerobic ribonucleoside-triphosphate reductase complement(548911..551094) Rahnella sp. Y9602 10211491 YP_004211274.1 CDS Rahaq_0519 NC_015061.1 551393 553036 R TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase catalytic region; KEGG: spe:Spro_0528 trehalose-6-phosphate hydrolase; SMART: alpha amylase catalytic sub domain; alpha,alpha-phosphotrehalase complement(551393..553036) Rahnella sp. Y9602 10211492 YP_004211275.1 CDS Rahaq_0520 NC_015061.1 553059 554477 R TIGRFAM: PTS system, trehalose-specific IIBC subunit; PTS system, glucose-like IIB subunint; KEGG: spe:Spro_0529 PTS system trehalose(maltose)-specific transporter subunits IIBC; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; PTS system trehalose-specific transporter subunit IIBC complement(553059..554477) Rahnella sp. Y9602 10211493 YP_004211276.1 CDS Rahaq_0521 NC_015061.1 554630 555586 R TIGRFAM: trehalose operon repressor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE3775 trehalose repressor; SMART: regulatory protein LacI; LacI family transcriptional regulator complement(554630..555586) Rahnella sp. Y9602 10211494 YP_004211277.1 CDS Rahaq_0522 NC_015061.1 555934 558633 D TIGRFAM: magnesium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; KEGG: spe:Spro_0535 magnesium-transporting ATPase MgtA; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; magnesium-translocating P-type ATPase 555934..558633 Rahnella sp. Y9602 10211495 YP_004211278.1 CDS Rahaq_0523 NC_015061.1 558711 559685 R PFAM: Integral membrane protein TerC; KEGG: eay:EAM_0499 protein Alx ( high pH-induced membrane-bound redox modulator); integral membrane protein TerC complement(558711..559685) Rahnella sp. Y9602 10211496 YP_004211279.1 CDS Rahaq_0524 NC_015061.1 559983 560729 R PFAM: glutamine amidotransferase class-I; KEGG: spe:Spro_4317 glutamine amidotransferase class-I; glutamine amidotransferase complement(559983..560729) Rahnella sp. Y9602 10211497 YP_004211280.1 CDS Rahaq_0525 NC_015061.1 560756 561742 R PFAM: oxidoreductase domain protein; KEGG: spe:Spro_4316 oxidoreductase domain-containing protein; oxidoreductase domain-containing protein complement(560756..561742) Rahnella sp. Y9602 10211498 YP_004211281.1 CDS Rahaq_0526 NC_015061.1 561765 562271 R PFAM: protein of unknown function DUF45; KEGG: yen:YE3701 hypothetical protein; hypothetical protein complement(561765..562271) Rahnella sp. Y9602 10211499 YP_004211282.1 CDS Rahaq_0527 NC_015061.1 562442 563593 D KEGG: spe:Spro_4312 rRNA (guanine-N(2)-)-methyltransferase; PFAM: methyltransferase small; rRNA (guanine-N(2)-)-methyltransferase 562442..563593 Rahnella sp. Y9602 10211500 YP_004211283.1 CDS Rahaq_0528 NC_015061.1 563677 565713 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ypi:YpsIP31758_0501 2,4-dienoyl-coa reductase; NADH:flavin oxidoreductase complement(563677..565713) Rahnella sp. Y9602 10211501 YP_004211284.1 CDS Rahaq_0529 NC_015061.1 566110 566976 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: spe:Spro_4743 enoyl-CoA hydratase; Enoyl-CoA hydratase/isomerase 566110..566976 Rahnella sp. Y9602 10211502 YP_004211285.1 CDS Rahaq_0530 NC_015061.1 567006 569024 R TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; KEGG: yen:YE0053 RNase II stability modulator; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(567006..569024) Rahnella sp. Y9602 10211503 YP_004211286.1 CDS Rahaq_0531 NC_015061.1 569307 571604 R PFAM: glycoside hydrolase family 3 domain protein; KEGG: spe:Spro_1371 glycoside hydrolase family 3 protein; glycoside hydrolase complement(569307..571604) Rahnella sp. Y9602 10211504 YP_004211287.1 CDS Rahaq_0532 NC_015061.1 571984 572268 R KEGG: spe:Spro_2355 hypothetical protein; hypothetical protein complement(571984..572268) Rahnella sp. Y9602 10211505 YP_004211288.1 CDS Rahaq_0533 NC_015061.1 572521 575247 R KEGG: ebi:EbC_44730 transcriptional regulator MalT; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; LuxR family transcriptional regulator complement(572521..575247) Rahnella sp. Y9602 10211506 YP_004211289.1 CDS Rahaq_0534 NC_015061.1 575570 577972 D KEGG: ebi:EbC_44720 maltodextrin phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase 575570..577972 Rahnella sp. Y9602 10211507 YP_004211290.1 CDS Rahaq_0535 NC_015061.1 577982 580072 D TIGRFAM: 4-alpha-glucanotransferase; KEGG: ebi:EbC_44710 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77; 4-alpha-glucanotransferase 577982..580072 Rahnella sp. Y9602 10211508 YP_004211291.1 CDS Rahaq_0536 NC_015061.1 580194 581198 D PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ddd:Dda3937_00500 ISEch4 transposase; transposase IS116/IS110/IS902 family protein 580194..581198 Rahnella sp. Y9602 10211509 YP_004211292.1 CDS Rahaq_0537 NC_015061.1 581694 582584 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_44700 maltose transport system permease protein; binding-protein-dependent transport system inner membrane protein complement(581694..582584) Rahnella sp. Y9602 10211510 YP_004211293.1 CDS Rahaq_0538 NC_015061.1 582598 584142 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_44690 maltose/maltodextrin ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein complement(582598..584142) Rahnella sp. Y9602 10211511 YP_004211294.1 CDS Rahaq_0539 NC_015061.1 584214 585413 R PFAM: extracellular solute-binding protein family 1; KEGG: ebi:EbC_44680 maltose/maltodextrin-binding periplasmic protein; extracellular solute-binding protein complement(584214..585413) Rahnella sp. Y9602 10211512 YP_004211295.1 CDS Rahaq_0540 NC_015061.1 585780 586889 D KEGG: spe:Spro_4470 maltose/maltodextrin transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter 585780..586889 Rahnella sp. Y9602 10211513 YP_004211296.1 CDS Rahaq_0541 NC_015061.1 586919 588214 D PFAM: porin LamB type; KEGG: ebi:EbC_44660 maltoporin; porin 586919..588214 Rahnella sp. Y9602 10211514 YP_004211297.1 CDS Rahaq_0542 NC_015061.1 588445 589341 D PFAM: Maltose operon periplasmic; KEGG: ebi:EbC_44650 maltose operon periplasmic protein; maltose operon periplasmic 588445..589341 Rahnella sp. Y9602 10211515 YP_004211298.1 CDS Rahaq_0543 NC_015061.1 589579 590418 D KEGG: pfs:PFLU2718 AraC-family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 589579..590418 Rahnella sp. Y9602 10211516 YP_004211299.1 CDS Rahaq_0544 NC_015061.1 590470 590907 D PFAM: Protein of unknown function DUF2000; KEGG: ebi:EbC_15810 conserved uncharacterized protein; hypothetical protein 590470..590907 Rahnella sp. Y9602 10211517 YP_004211300.1 CDS Rahaq_0545 NC_015061.1 590978 591676 D KEGG: mlo:mll2704 acid phosphatase; acid phosphatase 590978..591676 Rahnella sp. Y9602 10211518 YP_004211301.1 CDS Rahaq_0546 NC_015061.1 591740 592225 D KEGG: pfl:PFL_5108 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylguanine DNA methyltransferase ribonuclease domain protein; methylated-DNA--protein-cysteine methyltransferase 591740..592225 Rahnella sp. Y9602 10211519 YP_004211302.1 CDS Rahaq_0547 NC_015061.1 592338 593681 D KEGG: set:SEN1744 glutamate dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; glutamate dehydrogenase 592338..593681 Rahnella sp. Y9602 10211520 YP_004211303.1 CDS Rahaq_0548 NC_015061.1 593751 596045 R KEGG: spe:Spro_3430 outer membrane receptor FepA; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; TonB-dependent siderophore receptor complement(593751..596045) Rahnella sp. Y9602 10211521 YP_004211304.1 CDS Rahaq_0549 NC_015061.1 596247 597590 D PFAM: esterase; KEGG: spe:Spro_3429 enterobactin/ferric enterobactin esterase; esterase 596247..597590 Rahnella sp. Y9602 10211522 YP_004211305.1 CDS Rahaq_0550 NC_015061.1 597564 598361 R KEGG: spe:Spro_3426 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(597564..598361) Rahnella sp. Y9602 10211523 YP_004211306.1 CDS Rahaq_0551 NC_015061.1 598358 599386 R PFAM: transport system permease protein; KEGG: spe:Spro_3425 iron-enterobactin transporter permease; transport system permease complement(598358..599386) Rahnella sp. Y9602 10211524 YP_004211307.1 CDS Rahaq_0552 NC_015061.1 599389 600390 R PFAM: transport system permease protein; KEGG: spe:Spro_3424 iron-enterobactin transporter membrane protein; transport system permease complement(599389..600390) Rahnella sp. Y9602 10211525 YP_004211308.1 CDS Rahaq_0553 NC_015061.1 600390 601358 R PFAM: periplasmic binding protein; KEGG: spe:Spro_3422 iron-enterobactin transporter periplasmic binding protein; periplasmic binding protein complement(600390..601358) Rahnella sp. Y9602 10211526 YP_004211309.1 CDS Rahaq_0555 NC_015061.1 603538 604302 R PFAM: integrase family protein; KEGG: ent:Ent638_3514 phage integrase family protein; integrase family protein complement(603538..604302) Rahnella sp. Y9602 10211528 YP_004211310.1 CDS Rahaq_0556 NC_015061.1 604749 605114 D KEGG: aci:ACIAD0051 hypothetical protein; hypothetical protein 604749..605114 Rahnella sp. Y9602 10211529 YP_004211311.1 CDS Rahaq_0557 NC_015061.1 605160 605714 D manually curated; KEGG: reu:Reut_A0552 hypothetical protein; hypothetical protein 605160..605714 Rahnella sp. Y9602 10211530 YP_004211312.1 CDS Rahaq_0558 NC_015061.1 605717 606358 D KEGG: reu:Reut_A0551 hypothetical protein; hypothetical protein 605717..606358 Rahnella sp. Y9602 10211531 YP_004211313.1 CDS Rahaq_0559 NC_015061.1 606355 606684 D KEGG: rso:RSc2281 hypothetical protein; hypothetical protein 606355..606684 Rahnella sp. Y9602 10211532 YP_004211314.1 CDS Rahaq_0560 NC_015061.1 607265 607429 D KEGG: bcm:Bcenmc03_5369 hypothetical protein; hypothetical protein 607265..607429 Rahnella sp. Y9602 10211533 YP_004211315.1 CDS Rahaq_0561 NC_015061.1 607561 607890 R KEGG: eta:ETA_14180 hypothetical protein; hypothetical protein complement(607561..607890) Rahnella sp. Y9602 10211534 YP_004211316.1 CDS Rahaq_0562 NC_015061.1 608378 609217 R KEGG: nwi:Nwi_1613 hypothetical protein; hypothetical protein complement(608378..609217) Rahnella sp. Y9602 10211535 YP_004211317.1 CDS Rahaq_0563 NC_015061.1 609299 610543 R KEGG: cch:Cag_0033 hypothetical protein; hypothetical protein complement(609299..610543) Rahnella sp. Y9602 10211536 YP_004211318.1 CDS Rahaq_0564 NC_015061.1 610563 611561 R PFAM: integrase family protein; KEGG: ent:Ent638_3514 phage integrase family protein; integrase family protein complement(610563..611561) Rahnella sp. Y9602 10211537 YP_004211319.1 CDS Rahaq_0565 NC_015061.1 611561 612151 R PFAM: CI repressor; KEGG: kpn:KPN_04893 prophage repressor protein CI; CI repressor complement(611561..612151) Rahnella sp. Y9602 10211538 YP_004211320.1 CDS Rahaq_0566 NC_015061.1 612283 612543 D KEGG: kpn:KPN_04892 prophage excisionase; prophage excisionase 612283..612543 Rahnella sp. Y9602 10211539 YP_004211321.1 CDS Rahaq_0567 NC_015061.1 612574 613080 D KEGG: yps:YPTB1769 regulatory protein CII bacteriophage 186; regulatory protein CII bacteriophage 186 612574..613080 Rahnella sp. Y9602 10211540 YP_004211322.1 CDS Rahaq_0568 NC_015061.1 613083 613253 D manually curated; KEGG: ypy:YPK_0886 hypothetical protein; hypothetical protein 613083..613253 Rahnella sp. Y9602 10211541 YP_004211323.1 CDS Rahaq_0569 NC_015061.1 613261 613563 D KEGG: yps:YPTB1768 gpB bacteriophage P2; gpB bacteriophage P2 613261..613563 Rahnella sp. Y9602 10211542 YP_004211324.1 CDS Rahaq_0570 NC_015061.1 613631 613909 D KEGG: enc:ECL_04437 hypothetical protein; hypothetical protein 613631..613909 Rahnella sp. Y9602 10211543 YP_004211325.1 CDS Rahaq_0571 NC_015061.1 613909 614250 D KEGG: pct:PC1_3161 hypothetical protein; hypothetical protein 613909..614250 Rahnella sp. Y9602 10211544 YP_004211326.1 CDS Rahaq_0572 NC_015061.1 614243 614467 D TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; KEGG: stt:t3408 hypothetical protein; phage/conjugal plasmid C-4 type zinc finger protein, TraR family 614243..614467 Rahnella sp. Y9602 10211545 YP_004211327.1 CDS Rahaq_0573 NC_015061.1 614547 616790 D PFAM: replication gene A; KEGG: yps:YPTB1766 phage P2 replication protein; replication protein A 614547..616790 Rahnella sp. Y9602 10211546 YP_004211328.1 CDS Rahaq_0574 NC_015061.1 617040 617135 D hypothetical protein 617040..617135 Rahnella sp. Y9602 10211547 YP_004211329.1 CDS Rahaq_0575 NC_015061.1 617837 618364 D KEGG: plu:plu0863 hypothetical protein; hypothetical protein 617837..618364 Rahnella sp. Y9602 10211548 YP_004211330.1 CDS Rahaq_0576 NC_015061.1 618364 618828 D KEGG: fjo:Fjoh_3614 hypothetical protein; hypothetical protein 618364..618828 Rahnella sp. Y9602 10211549 YP_004211331.1 CDS Rahaq_0577 NC_015061.1 619134 620051 D KEGG: pha:PSHAb0220 stationary phase or STEss regulating sigma factor; stationary phase or STEss regulating sigma factor 619134..620051 Rahnella sp. Y9602 10211550 YP_004211332.1 CDS Rahaq_0578 NC_015061.1 620281 621312 R KEGG: yps:YPTB1764 capsid portal protein; TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein; phage portal protein, PBSX family complement(620281..621312) Rahnella sp. Y9602 10211551 YP_004211333.1 CDS Rahaq_0579 NC_015061.1 621314 623104 R KEGG: ctu:Ctu_32400 terminase, ATPase subunit; terminase, ATPase subunit complement(621314..623104) Rahnella sp. Y9602 10211552 YP_004211334.1 CDS Rahaq_0580 NC_015061.1 623225 624076 D PFAM: capsid scaffolding; KEGG: yps:YPTB1858 V protein phage 186; capsid scaffolding 623225..624076 Rahnella sp. Y9602 10211553 YP_004211335.1 CDS Rahaq_0581 NC_015061.1 624123 625187 D KEGG: yps:YPTB1760 major capsid protein; TIGRFAM: phage major capsid protein, P2 family; PFAM: major capsid protein P2; phage major capsid protein, P2 family 624123..625187 Rahnella sp. Y9602 10211554 YP_004211336.1 CDS Rahaq_0582 NC_015061.1 625201 625857 D PFAM: small terminase subunit; KEGG: pct:PC1_3174 small terminase subunit; small terminase subunit 625201..625857 Rahnella sp. Y9602 10211555 YP_004211337.1 CDS Rahaq_0583 NC_015061.1 625953 626423 D PFAM: head completion protein; KEGG: yps:YPTB1758 phage head completion protein GpL; head completion protein 625953..626423 Rahnella sp. Y9602 10211556 YP_004211338.1 CDS Rahaq_0584 NC_015061.1 626423 626626 D PFAM: tail X family protein; KEGG: yps:YPTB1757 phage-related tail protein; tail X family protein 626423..626626 Rahnella sp. Y9602 10211557 YP_004211339.1 CDS Rahaq_0585 NC_015061.1 626632 626841 D KEGG: spe:Spro_0872 prophage Hp1 family holin; prophage Hp1 family holin 626632..626841 Rahnella sp. Y9602 10211558 YP_004211340.1 CDS Rahaq_0586 NC_015061.1 626822 627331 D PFAM: glycoside hydrolase family 24; KEGG: yps:YPTB1755 phage lysozyme; glycoside hydrolase 626822..627331 Rahnella sp. Y9602 10211559 YP_004211341.1 CDS Rahaq_0587 NC_015061.1 627331 627756 D TIGRFAM: phage lysis regulatory protein, LysB family; KEGG: yps:YPTB1754 Orf27; P2 LysB homolog; control of lysis [Ente; phage lysis regulatory protein, LysB family 627331..627756 Rahnella sp. Y9602 10211560 YP_004211342.1 CDS Rahaq_0588 NC_015061.1 627852 628319 D KEGG: ecv:APECO1_4476 tail protein; tail protein 627852..628319 Rahnella sp. Y9602 10211561 YP_004211343.1 CDS Rahaq_0589 NC_015061.1 628312 628761 D TIGRFAM: phage virion morphogenesis protein; KEGG: ctu:Ctu_32300 tail completion protein S; phage virion morphogenesis protein 628312..628761 Rahnella sp. Y9602 10211562 YP_004211344.1 CDS Rahaq_0590 NC_015061.1 628850 629797 D KEGG: bgf:BC1003_1616 hypothetical protein; hypothetical protein 628850..629797 Rahnella sp. Y9602 10211563 YP_004211345.1 CDS Rahaq_0591 NC_015061.1 629880 630524 D TIGRFAM: phage baseplate assembly protein V; KEGG: spe:Spro_0869 phage baseplate assembly protein V; phage baseplate assembly protein V 629880..630524 Rahnella sp. Y9602 10211564 YP_004211346.1 CDS Rahaq_0592 NC_015061.1 630535 630666 D KEGG: mxa:MXAN_2295 hypothetical protein; hypothetical protein 630535..630666 Rahnella sp. Y9602 10211565 YP_004211347.1 CDS Rahaq_0593 NC_015061.1 630659 631009 D PFAM: GPW/gp25 family protein; KEGG: yps:YPTB1750 hypothetical protein; GPW/gp25 family protein 630659..631009 Rahnella sp. Y9602 10211566 YP_004211348.1 CDS Rahaq_0594 NC_015061.1 631013 631921 D PFAM: Baseplate J family protein; KEGG: spe:Spro_0867 baseplate J family protein; baseplate J family protein 631013..631921 Rahnella sp. Y9602 10211567 YP_004211349.1 CDS Rahaq_0595 NC_015061.1 631914 632441 D TIGRFAM: phage tail protein I; KEGG: ecz:ECS88_2197 tail protein I (GPI); phage tail protein I 631914..632441 Rahnella sp. Y9602 10211568 YP_004211350.1 CDS Rahaq_0596 NC_015061.1 632451 635249 D PFAM: tail fiber repeat 2 protein; KEGG: xbo:XBJ1_1381 e14 prophage; tail fiber protein (modular protein); tail fiber repeat 2 protein 632451..635249 Rahnella sp. Y9602 10211569 YP_004211351.1 CDS Rahaq_0597 NC_015061.1 635259 635714 D PFAM: tail assembly chaperone gp38; KEGG: plu:plu3023 hypothetical protein; tail assembly chaperone gp38 635259..635714 Rahnella sp. Y9602 10211570 YP_004211352.1 CDS Rahaq_0598 NC_015061.1 635844 637013 D KEGG: yps:YPTB1745 tail sheath protein (P2 and 186 bacteriophage); tail sheath protein (P2 and 186 bacteriophage) 635844..637013 Rahnella sp. Y9602 10211571 YP_004211353.1 CDS Rahaq_0599 NC_015061.1 637028 637537 D KEGG: spe:Spro_0862 phage major tail tube protein; TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; phage major tail tube protein 637028..637537 Rahnella sp. Y9602 10211572 YP_004211354.1 CDS Rahaq_0600 NC_015061.1 637596 637877 D PFAM: tail E family protein; KEGG: spe:Spro_0861 tail E family protein; tail E family protein 637596..637877 Rahnella sp. Y9602 10211573 YP_004211355.1 CDS Rahaq_0601 NC_015061.1 637910 638029 D KEGG: kpn:KPN_04861 prophage tail protein; manually curated; PFAM: P2 GpE family protein; P2 GpE family protein 637910..638029 Rahnella sp. Y9602 10211574 YP_004211356.1 CDS Rahaq_0602 NC_015061.1 638022 640496 D KEGG: kpn:KPN_04860 prophage tail length determinator; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region; phage tail tape measure protein, TP901 family 638022..640496 Rahnella sp. Y9602 10211575 YP_004211357.1 CDS Rahaq_0603 NC_015061.1 640509 640979 D PFAM: P2 GpU family protein; KEGG: pct:PC1_3197 P2 GpU family protein; P2 GpU family protein 640509..640979 Rahnella sp. Y9602 10211576 YP_004211358.1 CDS Rahaq_0604 NC_015061.1 640976 642139 D KEGG: yps:YPTB1739 D protein bacteriophage 186 and P2; D protein bacteriophage 186 and P2 640976..642139 Rahnella sp. Y9602 10211577 YP_004211359.1 CDS Rahaq_0605 NC_015061.1 642154 642489 R KEGG: ddc:Dd586_2409 hypothetical protein; hypothetical protein complement(642154..642489) Rahnella sp. Y9602 10211578 YP_004211360.1 CDS Rahaq_0606 NC_015061.1 642595 642816 D KEGG: ecg:E2348C_2893 predicted DNA-binding transcriptional regulator; manually curated; PFAM: transcriptional activator Ogr/delta; transcriptional activator Ogr/delta 642595..642816 Rahnella sp. Y9602 10211579 YP_004211361.1 CDS Rahaq_0607 NC_015061.1 643223 643726 D PFAM: Uracil-DNA glycosylase superfamily; KEGG: pwa:Pecwa_0782 G/U mismatch-specific DNA glycosylase; uracil-DNA glycosylase 643223..643726 Rahnella sp. Y9602 10211581 YP_004211362.1 CDS Rahaq_0608 NC_015061.1 644012 644107 D hypothetical protein 644012..644107 Rahnella sp. Y9602 10211582 YP_004211363.1 CDS Rahaq_0609 NC_015061.1 644239 644496 D KEGG: dda:Dd703_2118 hypothetical protein; hypothetical protein 644239..644496 Rahnella sp. Y9602 10211583 YP_004211364.1 CDS Rahaq_0610 NC_015061.1 644577 645179 D KEGG: pwa:Pecwa_4468 hypothetical protein; hypothetical protein 644577..645179 Rahnella sp. Y9602 10211584 YP_004211365.1 CDS Rahaq_0611 NC_015061.1 645213 645680 D KEGG: cai:Caci_2650 hypothetical protein; hypothetical protein 645213..645680 Rahnella sp. Y9602 10211585 YP_004211366.1 CDS Rahaq_0612 NC_015061.1 645741 647579 R KEGG: ypb:YPTS_3562 RNA polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 non-essential domain protein; sigma-70 1.1 domain protein; sigma-70 region 1.2; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein; RNA polymerase sigma-70 subunit RpoD complement(645741..647579) Rahnella sp. Y9602 10211586 YP_004211367.1 CDS Rahaq_0613 NC_015061.1 647782 649530 R TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; TOPRIM domain-containing protein; DNA primase, DnaB-helicase binding domain; DNA primase DnaG DnaB-binding; KEGG: spe:Spro_4299 DNA primase; SMART: DNA primase DnaG DnaB-binding; Toprim sub domain-containing protein; DNA primase complement(647782..649530) Rahnella sp. Y9602 10211587 YP_004211368.1 CDS Rahaq_0614 NC_015061.1 649666 649881 R KEGG: pam:PANA_3388 RpsU; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; 30S ribosomal protein S21 complement(649666..649881) Rahnella sp. Y9602 10211588 YP_004211369.1 CDS Rahaq_0615 NC_015061.1 650197 651210 D TIGRFAM: metalloendopeptidase, glycoprotease family; KEGG: sdy:SDY_3248 DNA-binding/iron metalloprotein/AP endonuclease; PFAM: peptidase M22 glycoprotease; glycoprotease family metalloendopeptidase 650197..651210 Rahnella sp. Y9602 10211589 YP_004211370.1 CDS Rahaq_0616 NC_015061.1 651394 652023 R PFAM: protein of unknown function DUF205; KEGG: ypb:YPTS_3558 glycerol-3-phosphate acyltransferase PlsY; hypothetical protein complement(651394..652023) Rahnella sp. Y9602 10211590 YP_004211371.1 CDS Rahaq_0617 NC_015061.1 652131 652487 D TIGRFAM: dihydroneopterin aldolase; KEGG: yen:YE3679 bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase; PFAM: dihydroneopterin aldolase; dihydroneopterin aldolase 652131..652487 Rahnella sp. Y9602 10211591 YP_004211372.1 CDS Rahaq_0618 NC_015061.1 652671 653498 D KEGG: ent:Ent638_3460 undecaprenyl pyrophosphate phosphatase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; undecaprenol kinase 652671..653498 Rahnella sp. Y9602 10211592 YP_004211373.1 CDS Rahaq_0619 NC_015061.1 653577 654812 R PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: yen:YE3677 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase; polynucleotide adenylyltransferase complement(653577..654812) Rahnella sp. Y9602 10211593 YP_004211374.1 CDS Rahaq_0620 NC_015061.1 654943 655563 R SMART: SH3 domain protein; KEGG: spe:Spro_4292 signal transduction protein; SH3 domain-containing protein complement(654943..655563) Rahnella sp. Y9602 10211594 YP_004211375.1 CDS Rahaq_0621 NC_015061.1 655844 657151 D PFAM: adenylate cyclase; KEGG: spe:Spro_4291 adenylate cyclase; adenylate cyclase 655844..657151 Rahnella sp. Y9602 10211595 YP_004211376.1 CDS Rahaq_0622 NC_015061.1 657209 660046 D KEGG: yen:YE3674 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase; PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase; (glutamate--ammonia-ligase) adenylyltransferase 657209..660046 Rahnella sp. Y9602 10211596 YP_004211377.1 CDS Rahaq_0623 NC_015061.1 660134 661561 D KEGG: spe:Spro_4289 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: PfkB domain protein; cytidylyltransferase; rfaE bifunctional protein 660134..661561 Rahnella sp. Y9602 10211597 YP_004211378.1 CDS Rahaq_0624 NC_015061.1 661665 662915 D PFAM: amino acid permease-associated region; KEGG: ypm:YP_2970 inner membrane protein YjeH; amino acid permease 661665..662915 Rahnella sp. Y9602 10211598 YP_004211379.1 CDS Rahaq_0625 NC_015061.1 662981 663253 R PFAM: protein of unknown function DUF526; KEGG: spe:Spro_4287 hypothetical protein; hypothetical protein complement(662981..663253) Rahnella sp. Y9602 10211599 YP_004211380.1 CDS Rahaq_0626 NC_015061.1 663695 664348 D KEGG: dze:Dd1591_3263 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase 663695..664348 Rahnella sp. Y9602 10211600 YP_004211381.1 CDS Rahaq_0627 NC_015061.1 664345 664596 R KEGG: tde:TDE0900 ABC transporter ATP-binding protein; ABC transporter ATP-binding protein complement(664345..664596) Rahnella sp. Y9602 10211601 YP_004211382.1 CDS Rahaq_0628 NC_015061.1 664598 665386 D PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: ddd:Dda3937_00723 dioxygenase; extradiol ring-cleavage dioxygenase class III protein subunit B 664598..665386 Rahnella sp. Y9602 10211602 YP_004211383.1 CDS Rahaq_0629 NC_015061.1 665439 666599 R KEGG: spe:Spro_4275 glutathionylspermidine synthase; PFAM: glutathionylspermidine synthase; Trypanothione synthase complement(665439..666599) Rahnella sp. Y9602 10211603 YP_004211384.1 CDS Rahaq_0630 NC_015061.1 666609 667280 R PFAM: protein of unknown function DUF1190; KEGG: spe:Spro_4274 hypothetical protein; hypothetical protein complement(666609..667280) Rahnella sp. Y9602 10211604 YP_004211385.1 CDS Rahaq_0631 NC_015061.1 667467 668960 R KEGG: ecq:ECED1_3701 outer membrane channel protein; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; TolC family type I secretion outer membrane protein complement(667467..668960) Rahnella sp. Y9602 10211605 YP_004211386.1 CDS Rahaq_0632 NC_015061.1 669191 669823 D KEGG: ypb:YPTS_3540 ADP-ribose pyrophosphatase NudF; PFAM: NUDIX hydrolase; ADP-ribose diphosphatase 669191..669823 Rahnella sp. Y9602 10211606 YP_004211387.1 CDS Rahaq_0633 NC_015061.1 669823 670248 D PFAM: protein of unknown function DUF1249; KEGG: enc:ECL_04361 hypothetical protein; hypothetical protein 669823..670248 Rahnella sp. Y9602 10211607 YP_004211388.1 CDS Rahaq_0634 NC_015061.1 670276 671106 D PFAM: Calcineurin phosphoesterase domain protein; metallophosphoesterase; KEGG: ypb:YPTS_3538 cyclic 3',5'-adenosine monophosphate phosphodiesterase; calcineurin phosphoesterase 670276..671106 Rahnella sp. Y9602 10211608 YP_004211389.1 CDS Rahaq_0635 NC_015061.1 671103 671684 D PFAM: protein of unknown function UPF0227; KEGG: ddc:Dd586_0327 protein of unknown function UPF0227; hypothetical protein 671103..671684 Rahnella sp. Y9602 10211609 YP_004211390.1 CDS Rahaq_0636 NC_015061.1 671801 673696 D SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA topoisomerase IV, B subunit; KEGG: spe:Spro_4263 DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; DNA gyrase subunit B domain protein; DNA topoisomerase IV subunit B 671801..673696 Rahnella sp. Y9602 10211610 YP_004211391.1 CDS Rahaq_0637 NC_015061.1 673780 674085 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: sgl:SG0274 hypothetical protein; antibiotic biosynthesis monooxygenase complement(673780..674085) Rahnella sp. Y9602 10211611 YP_004211392.1 CDS Rahaq_0638 NC_015061.1 674116 674703 R PFAM: NAD(P)H dehydrogenase (quinone); KEGG: ddd:Dda3937_01253 modulator of drug activity B; NAD(P)H dehydrogenase (quinone) complement(674116..674703) Rahnella sp. Y9602 10211612 YP_004211393.1 CDS Rahaq_0639 NC_015061.1 675036 677309 D SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA topoisomerase IV, A subunit; KEGG: spe:Spro_4259 DNA topoisomerase IV subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; DNA topoisomerase IV subunit A 675036..677309 Rahnella sp. Y9602 10211613 YP_004211394.1 CDS Rahaq_0640 NC_015061.1 677527 678264 D SMART: phospholipid/glycerol acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; KEGG: enc:ECL_04340 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 677527..678264 Rahnella sp. Y9602 10211614 YP_004211395.1 CDS Rahaq_0641 NC_015061.1 678399 679814 D PFAM: multicopper oxidase type 3; Twin-arginine translocation pathway, signal sequence, subgroup; multicopper oxidase type 2; KEGG: yen:YE3654 repressor protein for FtsI; multicopper oxidase type 3 678399..679814 Rahnella sp. Y9602 10211615 YP_004211396.1 CDS Rahaq_0642 NC_015061.1 679881 680705 R KEGG: ypb:YPTS_3528 2,5-diketo-D-gluconate reductase A; PFAM: aldo/keto reductase; 2,5-didehydrogluconate reductase complement(679881..680705) Rahnella sp. Y9602 10211616 YP_004211397.1 CDS Rahaq_0643 NC_015061.1 680832 681872 R PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: pfo:Pfl01_2347 zinc-containing alcohol dehydrogenase superfamily protein; molecular chaperone GroES complement(680832..681872) Rahnella sp. Y9602 10211617 YP_004211398.1 CDS Rahaq_0644 NC_015061.1 682178 683113 D KEGG: spe:Spro_4214 AraC family transcriptional regulator; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 682178..683113 Rahnella sp. Y9602 10211618 YP_004211399.1 CDS Rahaq_0645 NC_015061.1 683123 683782 R PFAM: SNARE associated Golgi protein; KEGG: pct:PC1_0340 SNARE associated Golgi protein; hypothetical protein complement(683123..683782) Rahnella sp. Y9602 10211619 YP_004211400.1 CDS Rahaq_0646 NC_015061.1 683999 685192 R KEGG: pwa:Pecwa_0384 cystathionine beta-lyase; TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; cystathionine beta-lyase complement(683999..685192) Rahnella sp. Y9602 10211620 YP_004211401.1 CDS Rahaq_0647 NC_015061.1 685371 686663 R KEGG: eca:ECA0355 DedA family membrane protein; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP dicarboxylate transporter subunit DctM complement(685371..686663) Rahnella sp. Y9602 10211621 YP_004211402.1 CDS Rahaq_0648 NC_015061.1 686676 687188 R PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: cko:CKO_03566 hypothetical protein; tripartite AtP-independent periplasmic transporter subunit DctQ complement(686676..687188) Rahnella sp. Y9602 10211622 YP_004211403.1 CDS Rahaq_0649 NC_015061.1 687245 688222 R KEGG: pct:PC1_0344 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7; TRAP dicarboxylate transporter subunit DctP complement(687245..688222) Rahnella sp. Y9602 10211623 YP_004211404.1 CDS Rahaq_0650 NC_015061.1 688724 689665 D KEGG: pct:PC1_0345 TonB-system energizer ExbB; TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel; tonB-system energizer ExbB 688724..689665 Rahnella sp. Y9602 10211624 YP_004211405.1 CDS Rahaq_0651 NC_015061.1 689675 690109 D KEGG: spe:Spro_4210 TonB system transport protein ExbD type-1; TIGRFAM: TonB system transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; TonB system transport protein ExbD 689675..690109 Rahnella sp. Y9602 10211625 YP_004211406.1 CDS Rahaq_0652 NC_015061.1 690181 691752 R TIGRFAM: galactarate dehydratase; KEGG: pwa:Pecwa_3558 galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; galactarate dehydratase complement(690181..691752) Rahnella sp. Y9602 10211626 YP_004211407.1 CDS Rahaq_0653 NC_015061.1 692304 693647 D KEGG: ebd:ECBD_0615 D-galactonate transporter; TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; d-galactonate transporter 692304..693647 Rahnella sp. Y9602 10211627 YP_004211408.1 CDS Rahaq_0654 NC_015061.1 693708 694478 D TIGRFAM: 2-dehydro-3-deoxyglucarate aldolase; KEGG: dda:Dd703_0844 alpha-dehydro-beta-deoxy-D-glucarate aldolase; PFAM: HpcH/HpaI aldolase; 2-dehydro-3-deoxyglucarate aldolase 693708..694478 Rahnella sp. Y9602 10211628 YP_004211409.1 CDS Rahaq_0655 NC_015061.1 694516 695400 D TIGRFAM: 2-hydroxy-3-oxopropionate reductase; KEGG: pwa:Pecwa_3553 tartronate semialdehyde reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 2-hydroxy-3-oxopropionate reductase 694516..695400 Rahnella sp. Y9602 10211629 YP_004211410.1 CDS Rahaq_0656 NC_015061.1 695521 696660 D TIGRFAM: glycerate kinase; KEGG: pwa:Pecwa_3551 glycerate kinase; PFAM: glycerate kinase; glycerate kinase 695521..696660 Rahnella sp. Y9602 10211630 YP_004211411.1 CDS Rahaq_0657 NC_015061.1 696778 698085 D PFAM: alanine racemase domain protein; KEGG: bpt:Bpet1585 D-serine deaminase; alanine racemase 696778..698085 Rahnella sp. Y9602 10211631 YP_004211412.1 CDS Rahaq_0658 NC_015061.1 698133 700883 R KEGG: spe:Spro_0790 hybrid sensory histidine kinase BarA; PFAM: Protein of unknown function DUF2222; histidine kinase HAMP region domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; response regulator receiver; Hpt domain protein; multi-sensor hybrid histidine kinase complement(698133..700883) Rahnella sp. Y9602 10211632 YP_004211413.1 CDS Rahaq_0659 NC_015061.1 700947 702317 D KEGG: yen:YE0743 23S rRNA 5-methyluridine methyltransferase; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; TrmA family RNA methyltransferase 700947..702317 Rahnella sp. Y9602 10211633 YP_004211414.1 CDS Rahaq_0660 NC_015061.1 702327 704564 D TIGRFAM: RelA/SpoT family protein; KEGG: spe:Spro_0792 GDP/GTP pyrophosphokinase; PFAM: RelA/SpoT domain protein; TGS domain-containing protein; amino acid-binding ACT domain protein; (p)ppGpp synthetase I SpoT/RelA 702327..704564 Rahnella sp. Y9602 10211634 YP_004211415.1 CDS Rahaq_0661 NC_015061.1 704643 705446 D KEGG: spe:Spro_0793 nucleoside triphosphate pyrophosphohydrolase; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; MazG family protein 704643..705446 Rahnella sp. Y9602 10211635 YP_004211416.1 CDS Rahaq_0662 NC_015061.1 705795 707432 D TIGRFAM: CTP synthase; KEGG: spe:Spro_0794 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I; CTP synthase 705795..707432 Rahnella sp. Y9602 10211636 YP_004211417.1 CDS Rahaq_0663 NC_015061.1 707508 708812 D TIGRFAM: enolase; KEGG: pwa:Pecwa_3545 phosphopyruvate hydratase; PFAM: Enolase-like; enolase 707508..708812 Rahnella sp. Y9602 10211637 YP_004211418.1 CDS Rahaq_0664 NC_015061.1 708934 710256 D PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein; transposase IS4 family protein 708934..710256 Rahnella sp. Y9602 10211638 YP_004211419.1 CDS Rahaq_0665 NC_015061.1 710324 711163 R PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: ent:Ent638_3232 transcriptional regulator; RpiR family transcriptional regulator complement(710324..711163) Rahnella sp. Y9602 10211639 YP_004211420.1 CDS Rahaq_0666 NC_015061.1 711329 712882 D KEGG: ent:Ent638_3231 PTS system, glucose-like IIB subunint; TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; PTS system glucose-like transporter subunit IIB 711329..712882 Rahnella sp. Y9602 10211640 YP_004211421.1 CDS Rahaq_0667 NC_015061.1 712879 713577 D KEGG: ctu:Ctu_33340 N-acetylmannosamine-6-phosphate 2-epimerase; PFAM: N-acetylmannosamine-6-phosphate epimerase; N-acylglucosamine-6-phosphate 2-epimerase 712879..713577 Rahnella sp. Y9602 10211641 YP_004211422.1 CDS Rahaq_0668 NC_015061.1 713679 714350 D PFAM: Radical SAM domain protein; KEGG: spe:Spro_0808 radical SAM domain-containing protein; radical SAM protein 713679..714350 Rahnella sp. Y9602 10211642 YP_004211423.1 CDS Rahaq_0669 NC_015061.1 714364 714723 R PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: kpu:KP1_4390 6-pyruvoyl tetrahydrobiopterin synthase; 6-pyruvoyl tetrahydrobiopterin synthase complement(714364..714723) Rahnella sp. Y9602 10211643 YP_004211424.1 CDS Rahaq_0670 NC_015061.1 714893 715897 D KEGG: dda:Dd703_0980 hypothetical protein; hypothetical protein 714893..715897 Rahnella sp. Y9602 10211644 YP_004211425.1 CDS Rahaq_0671 NC_015061.1 716243 718045 D KEGG: ebi:EbC_35390 sulfite reductase [NADPH] flavoprotein alpha-component; TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha chain; PFAM: FAD-binding domain protein; flavodoxin/nitric oxide synthase; oxidoreductase FAD/NAD(P)-binding domain protein; sulfite reductase (NADPH) flavoprotein, alpha chain 716243..718045 Rahnella sp. Y9602 10211645 YP_004211426.1 CDS Rahaq_0672 NC_015061.1 718073 719809 D KEGG: spe:Spro_0811 sulfite reductase subunit beta; TIGRFAM: sulfite reductase (NADPH) hemoprotein, beta-component; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; sulfite reductase (NADPH) hemoprotein subunit beta 718073..719809 Rahnella sp. Y9602 10211646 YP_004211427.1 CDS Rahaq_0673 NC_015061.1 719834 720571 D KEGG: spe:Spro_0812 phosphoadenosine phosphosulfate reductase; TIGRFAM: phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase; phosphoadenosine phosphosulfate reductase 719834..720571 Rahnella sp. Y9602 10211647 YP_004211428.1 CDS Rahaq_0674 NC_015061.1 720731 721768 R PFAM: peptidase M28; KEGG: spe:Spro_0815 alkaline phosphatase isozyme conversion aminopeptidase; peptidase M28 complement(720731..721768) Rahnella sp. Y9602 10211648 YP_004211429.1 CDS Rahaq_0675 NC_015061.1 722020 723444 D KEGG: spe:Spro_0817 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Sirohaem synthase, dimerisation domain; uroporphyrin-III C-methyltransferase 722020..723444 Rahnella sp. Y9602 10211649 YP_004211430.1 CDS Rahaq_0676 NC_015061.1 723455 724363 D KEGG: kva:Kvar_0951 sulfate adenylyltransferase, small subunit; TIGRFAM: sulfate adenylyltransferase, small subunit; PFAM: phosphoadenosine phosphosulfate reductase; sulfate adenylyltransferase, small subunit 723455..724363 Rahnella sp. Y9602 10211650 YP_004211431.1 CDS Rahaq_0677 NC_015061.1 724377 725804 D TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein; KEGG: yen:YE0763 sulfate adenylyltransferase subunit 1; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; sulfate adenylyltransferase, large subunit 724377..725804 Rahnella sp. Y9602 10211651 YP_004211432.1 CDS Rahaq_0678 NC_015061.1 725806 726429 D TIGRFAM: adenylylsulfate kinase; KEGG: ypb:YPTS_0801 adenylylsulfate kinase; PFAM: adenylylsulfate kinase; adenylylsulfate kinase 725806..726429 Rahnella sp. Y9602 10211652 YP_004211433.1 CDS Rahaq_0679 NC_015061.1 726489 726869 D KEGG: spe:Spro_0821 hypothetical protein; hypothetical protein 726489..726869 Rahnella sp. Y9602 10211653 YP_004211434.1 CDS Rahaq_0680 NC_015061.1 727037 727357 D PFAM: Septum formation initiator; KEGG: spe:Spro_0825 cell division protein FtsB; septum formation initiator 727037..727357 Rahnella sp. Y9602 10211654 YP_004211435.1 CDS Rahaq_0681 NC_015061.1 727360 728079 D manually curated; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; KEGG: yps:YPTB0770 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 727360..728079 Rahnella sp. Y9602 10211655 YP_004211436.1 CDS Rahaq_0682 NC_015061.1 728079 728552 D KEGG: spe:Spro_0827 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 728079..728552 Rahnella sp. Y9602 10211656 YP_004211437.1 CDS Rahaq_0683 NC_015061.1 728572 729621 D PFAM: tRNA pseudouridine synthase D TruD; KEGG: spe:Spro_0828 tRNA pseudouridine synthase D; tRNA pseudouridine synthase D TruD 728572..729621 Rahnella sp. Y9602 10211657 YP_004211438.1 CDS Rahaq_0684 NC_015061.1 729602 730366 D KEGG: spe:Spro_0829 stationary phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; stationary-phase survival protein SurE 729602..730366 Rahnella sp. Y9602 10211658 YP_004211439.1 CDS Rahaq_0685 NC_015061.1 730356 730982 D TIGRFAM: protein-L-isoaspartate O-methyltransferase; KEGG: spe:Spro_0830 protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 730356..730982 Rahnella sp. Y9602 10211659 YP_004211440.1 CDS Rahaq_0686 NC_015061.1 731225 732247 D KEGG: spe:Spro_0831 lipoprotein NlpD; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; peptidase M23 731225..732247 Rahnella sp. Y9602 10211660 YP_004211441.1 CDS Rahaq_0687 NC_015061.1 732299 733285 D KEGG: spe:Spro_0832 RNA polymerase sigma factor RpoS; TIGRFAM: RNA polymerase sigma factor RpoS; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein; RpoD subfamily RNA polymerase sigma-70 subunit 732299..733285 Rahnella sp. Y9602 10211661 YP_004211442.1 CDS Rahaq_0688 NC_015061.1 733384 735939 R TIGRFAM: DNA mismatch repair protein MutS; PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; KEGG: yen:YE0776 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; DNA mismatch repair protein MutS complement(733384..735939) Rahnella sp. Y9602 10211662 YP_004211443.1 CDS Rahaq_0689 NC_015061.1 736362 739022 D KEGG: bxe:Bxe_A0802 hypothetical protein; hypothetical protein 736362..739022 Rahnella sp. Y9602 10211663 YP_004211444.1 CDS Rahaq_0690 NC_015061.1 739176 740279 D TIGRFAM: lytic murein transglycosylase B; KEGG: ypz:YPZ3_2604 membrane-bound lytic murein transglycosylase B; lytic murein transglycosylase B 739176..740279 Rahnella sp. Y9602 10211664 YP_004211445.1 CDS Rahaq_0691 NC_015061.1 740441 740935 D PFAM: CinA domain protein; KEGG: spe:Spro_0840 competence damage-inducible protein A; CinA domain-containing protein 740441..740935 Rahnella sp. Y9602 10211665 YP_004211446.1 CDS Rahaq_0692 NC_015061.1 741043 742107 D TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: yen:YE0829 recombinase A; SMART: AAA ATPase; recA protein 741043..742107 Rahnella sp. Y9602 10211666 YP_004211447.1 CDS Rahaq_0693 NC_015061.1 742228 742917 D PFAM: regulatory protein RecX; KEGG: ypy:YPK_3374 recombination regulator RecX; regulatory protein RecX 742228..742917 Rahnella sp. Y9602 10211667 YP_004211448.1 CDS Rahaq_0694 NC_015061.1 743056 745683 D KEGG: spe:Spro_0843 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1; alanyl-tRNA synthetase 743056..745683 Rahnella sp. Y9602 10211668 YP_004211449.1 CDS Rahaq_0695 NC_015061.1 745940 746125 D KEGG: ebi:EbC_34800 carbon storage regulator; TIGRFAM: carbon storage regulator; PFAM: carbon storage regulator; carbon storage regulator CsrA 745940..746125 Rahnella sp. Y9602 10211669 YP_004211450.1 CDS Rahaq_0696 NC_015061.1 747157 747723 D KEGG: spe:Spro_0845 fructose-1-phosphatase; TIGRFAM: beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; beta-phosphoglucomutase family hydrolase 747157..747723 Rahnella sp. Y9602 10211674 YP_004211451.1 CDS Rahaq_0697 NC_015061.1 747720 748148 D KEGG: ypb:YPTS_0864 hypothetical protein; hypothetical protein 747720..748148 Rahnella sp. Y9602 10211675 YP_004211452.1 CDS Rahaq_0698 NC_015061.1 748234 749805 D KEGG: spe:Spro_0847 glutamate--cysteine ligase; TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase; glutamate/cysteine ligase 748234..749805 Rahnella sp. Y9602 10211676 YP_004211453.1 CDS Rahaq_0699 NC_015061.1 749963 750478 D KEGG: spe:Spro_0848 S-ribosylhomocysteinase; PFAM: LuxS protein; quorum-sensing autoinducer 2 (AI-2), LuxS 749963..750478 Rahnella sp. Y9602 10211677 YP_004211454.1 CDS Rahaq_0700 NC_015061.1 750548 751837 R PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: spe:Spro_0849 hypothetical protein; hypothetical protein complement(750548..751837) Rahnella sp. Y9602 10211678 YP_004211455.1 CDS Rahaq_0701 NC_015061.1 751854 752645 R PFAM: cytochrome c assembly protein; KEGG: spe:Spro_0850 cytochrome c assembly protein; cytochrome c assembly protein complement(751854..752645) Rahnella sp. Y9602 10211679 YP_004211456.1 CDS Rahaq_0702 NC_015061.1 752810 754171 D TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; KEGG: spe:Spro_0851 signal recognition particle protein; SMART: AAA ATPase; signal recognition particle protein 752810..754171 Rahnella sp. Y9602 10211680 YP_004211457.1 CDS Rahaq_0703 NC_015061.1 754290 754598 D manually curated; TIGRFAM: ribosomal protein S16; KEGG: pam:PANA_3023 RpsP; PFAM: ribosomal protein S16; 30S ribosomal protein S16 754290..754598 Rahnella sp. Y9602 10211681 YP_004211458.1 CDS Rahaq_0704 NC_015061.1 754617 755165 D KEGG: yen:YE0844 16S rRNA-processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; 16S rRNA-processing protein RimM 754617..755165 Rahnella sp. Y9602 10211682 YP_004211459.1 CDS Rahaq_0705 NC_015061.1 755233 756006 D TIGRFAM: tRNA (guanine-N1)-methyltransferase; KEGG: spe:Spro_0854 tRNA (guanine-N(1)-)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N1)-methyltransferase 755233..756006 Rahnella sp. Y9602 10211683 YP_004211460.1 CDS Rahaq_0706 NC_015061.1 756055 756402 D KEGG: yen:YE0846 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19; 50S ribosomal protein L19 756055..756402 Rahnella sp. Y9602 10211684 YP_004211461.1 CDS Rahaq_0707 NC_015061.1 756495 756674 R PFAM: transcriptional activator Ogr/delta; KEGG: spe:Spro_0856 transcriptional activator Ogr/delta; transcriptional activator Ogr/delta complement(756495..756674) Rahnella sp. Y9602 10211685 YP_004211462.1 CDS Rahaq_0708 NC_015061.1 756739 757839 R KEGG: kpn:KPN_04858 prophage tail protein; prophage tail protein complement(756739..757839) Rahnella sp. Y9602 10211686 YP_004211463.1 CDS Rahaq_0709 NC_015061.1 757842 758312 R PFAM: P2 GpU family protein; KEGG: pct:PC1_3197 P2 GpU family protein; P2 GpU family protein complement(757842..758312) Rahnella sp. Y9602 10211687 YP_004211464.1 CDS Rahaq_0710 NC_015061.1 758309 759940 R KEGG: yps:YPTB1741 bacteriophage P2 tail protein gpT; hypothetical protein complement(758309..759940) Rahnella sp. Y9602 10211688 YP_004211465.1 CDS Rahaq_0711 NC_015061.1 759933 760067 R KEGG: spe:Spro_0860 P2 GpE family protein; manually curated; PFAM: P2 GpE family protein; P2 GpE family protein complement(759933..760067) Rahnella sp. Y9602 10211689 YP_004211466.1 CDS Rahaq_0712 NC_015061.1 760088 760375 R PFAM: tail E family protein; KEGG: spe:Spro_0861 tail E family protein; tail E family protein complement(760088..760375) Rahnella sp. Y9602 10211690 YP_004211467.1 CDS Rahaq_0713 NC_015061.1 760435 760944 R KEGG: spe:Spro_0862 phage major tail tube protein; TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; phage major tail tube protein complement(760435..760944) Rahnella sp. Y9602 10211691 YP_004211468.1 CDS Rahaq_0714 NC_015061.1 760959 762128 R KEGG: spe:Spro_0863 tail sheath protein; tail sheath protein complement(760959..762128) Rahnella sp. Y9602 10211692 YP_004211469.1 CDS Rahaq_0715 NC_015061.1 762299 763258 R PFAM: Tail Collar domain protein; KEGG: ent:Ent638_3484 phage tail collar domain-containing protein; Tail Collar domain-containing protein complement(762299..763258) Rahnella sp. Y9602 10211693 YP_004211470.1 CDS Rahaq_0716 NC_015061.1 763248 763862 R TIGRFAM: phage tail protein I; KEGG: yps:YPTB1748 bacteriophage protein; phage tail protein I complement(763248..763862) Rahnella sp. Y9602 10211694 YP_004211471.1 CDS Rahaq_0717 NC_015061.1 763855 764763 R PFAM: Baseplate J family protein; KEGG: xne:XNC1_1190 baseplate assembly protein J (GpJ); baseplate J family protein complement(763855..764763) Rahnella sp. Y9602 10211695 YP_004211472.1 CDS Rahaq_0718 NC_015061.1 764769 765119 R PFAM: GPW/gp25 family protein; KEGG: spe:Spro_0868 gpW/GP25 family protein; GPW/gp25 family protein complement(764769..765119) Rahnella sp. Y9602 10211696 YP_004211473.1 CDS Rahaq_0719 NC_015061.1 765116 765757 R TIGRFAM: phage baseplate assembly protein V; KEGG: dze:Dd1591_1827 phage baseplate assembly protein V; phage baseplate assembly protein V complement(765116..765757) Rahnella sp. Y9602 10211697 YP_004211474.1 CDS Rahaq_0720 NC_015061.1 765839 766300 R KEGG: pam:PANA_3412 R; phage tail completion protein GpR complement(765839..766300) Rahnella sp. Y9602 10211698 YP_004211475.1 CDS Rahaq_0721 NC_015061.1 766393 766821 R TIGRFAM: phage lysis regulatory protein, LysB family; KEGG: yps:YPTB1754 Orf27; P2 LysB homolog; control of lysis [Ente; phage lysis regulatory protein, LysB family complement(766393..766821) Rahnella sp. Y9602 10211699 YP_004211476.1 CDS Rahaq_0722 NC_015061.1 766822 767331 R PFAM: glycoside hydrolase family 24; KEGG: spe:Spro_0871 glycoside hydrolase family protein; glycoside hydrolase complement(766822..767331) Rahnella sp. Y9602 10211700 YP_004211477.1 CDS Rahaq_0723 NC_015061.1 767312 767533 R KEGG: spe:Spro_0872 prophage Hp1 family holin; prophage Hp1 family holin complement(767312..767533) Rahnella sp. Y9602 10211701 YP_004211478.1 CDS Rahaq_0724 NC_015061.1 767524 767727 R PFAM: tail X family protein; KEGG: spe:Spro_0873 tail X family protein; tail X family protein complement(767524..767727) Rahnella sp. Y9602 10211702 YP_004211479.1 CDS Rahaq_0725 NC_015061.1 767939 768133 R KEGG: ddd:Dda3937_03773 hypothetical protein; hypothetical protein complement(767939..768133) Rahnella sp. Y9602 10211703 YP_004211480.1 CDS Rahaq_0726 NC_015061.1 768282 770174 R PFAM: replication gene A; KEGG: pct:PC1_3164 replication protein A; replication protein A complement(768282..770174) Rahnella sp. Y9602 10211704 YP_004211481.1 CDS Rahaq_0727 NC_015061.1 770268 770489 R TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; KEGG: ddd:Dda3937_03774 hypothetical protein; phage/conjugal plasmid C-4 type zinc finger protein, TraR family complement(770268..770489) Rahnella sp. Y9602 10211705 YP_004211482.1 CDS Rahaq_0728 NC_015061.1 770489 770764 R KEGG: spe:Spro_0876 gpB bacteriophage P2-like protein; gpB bacteriophage P2-like protein complement(770489..770764) Rahnella sp. Y9602 10211706 YP_004211483.1 CDS Rahaq_0729 NC_015061.1 770897 771487 D PFAM: CI repressor; KEGG: spe:Spro_0877 CI repressor; CI repressor 770897..771487 Rahnella sp. Y9602 10211707 YP_004211484.1 CDS Rahaq_0730 NC_015061.1 771776 772852 D TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: spe:Spro_0879 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase 771776..772852 Rahnella sp. Y9602 10211708 YP_004211485.1 CDS Rahaq_0731 NC_015061.1 772859 773980 D TIGRFAM: chorismate mutase; KEGG: yen:YE0851 bifunctional chorismate mutase/prephenate dehydrogenase; PFAM: Chorismate mutase, type II; Prephenate dehydrogenase; chorismate mutase 772859..773980 Rahnella sp. Y9602 10211709 YP_004211486.1 CDS Rahaq_0732 NC_015061.1 774058 775212 R KEGG: yen:YE0852 bifunctional chorismate mutase/prephenate dehydratase; TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase, type II; chorismate mutase complement(774058..775212) Rahnella sp. Y9602 10211710 YP_004211487.1 CDS Rahaq_0733 NC_015061.1 775523 775867 R KEGG: eca:ECA3349 sigma(54) modulation protein; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/ribosomal protein S30EA complement(775523..775867) Rahnella sp. Y9602 10211711 YP_004211488.1 CDS Rahaq_0734 NC_015061.1 776149 776883 R TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: spe:Spro_0883 outer membrane protein assembly complex subunit YfiO; outer membrane assembly lipoprotein YfiO complement(776149..776883) Rahnella sp. Y9602 10211712 YP_004211489.1 CDS Rahaq_0735 NC_015061.1 777014 777991 D TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: spe:Spro_0884 23S rRNA pseudouridine synthase D; SMART: RNA-binding S4 domain protein; pseudouridine synthase 777014..777991 Rahnella sp. Y9602 10211713 YP_004211490.1 CDS Rahaq_0736 NC_015061.1 777991 778728 D PFAM: protein of unknown function DUF152; KEGG: pct:PC1_3142 hypothetical protein; hypothetical protein 777991..778728 Rahnella sp. Y9602 10211714 YP_004211491.1 CDS Rahaq_0737 NC_015061.1 778859 781432 D TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase; Clp ATPase-like; KEGG: spe:Spro_0886 protein disaggregation chaperone; SMART: AAA ATPase; ATP-dependent chaperone ClpB 778859..781432 Rahnella sp. Y9602 10211715 YP_004211492.1 CDS Rahaq_0738 NC_015061.1 787399 788697 D TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); KEGG: spe:Spro_3751 alpha-ketoglutarate transporter; metabolite/H+ symporter, major facilitator superfamily (MFS) 787399..788697 Rahnella sp. Y9602 10211721 YP_004211493.1 CDS Rahaq_0739 NC_015061.1 788887 790242 R KEGG: spe:Spro_3749 phosphatidylserine synthase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; phospholipase D/Transphosphatidylase complement(788887..790242) Rahnella sp. Y9602 10211722 YP_004211494.1 CDS Rahaq_0740 NC_015061.1 790327 793047 R PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: spe:Spro_3748 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(790327..793047) Rahnella sp. Y9602 10211723 YP_004211495.1 CDS Rahaq_0741 NC_015061.1 793079 793783 R PFAM: DTW domain containing protein; KEGG: ypb:YPTS_0894 DTW domain-containing protein; DTW domain containing protein complement(793079..793783) Rahnella sp. Y9602 10211724 YP_004211496.1 CDS Rahaq_0742 NC_015061.1 793913 794332 R KEGG: pam:PANA_3003 TrxC; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein; thioredoxin complement(793913..794332) Rahnella sp. Y9602 10211725 YP_004211497.1 CDS Rahaq_0743 NC_015061.1 794577 795680 D PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: spe:Spro_3745 methyltransferase; tRNA/rRNA methyltransferase SpoU 794577..795680 Rahnella sp. Y9602 10211726 YP_004211498.1 CDS Rahaq_0744 NC_015061.1 795756 797291 R KEGG: ypb:YPTS_0897 EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA subfamily drug resistance transporter complement(795756..797291) Rahnella sp. Y9602 10211727 YP_004211499.1 CDS Rahaq_0745 NC_015061.1 797309 798484 R KEGG: spe:Spro_3743 efflux pump membrane protein; TIGRFAM: efflux pump membrane protein; PFAM: secretion protein HlyD family protein; efflux pump membrane protein complement(797309..798484) Rahnella sp. Y9602 10211728 YP_004211500.1 CDS Rahaq_0746 NC_015061.1 798510 799964 R KEGG: spe:Spro_3742 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein complement(798510..799964) Rahnella sp. Y9602 10211729 YP_004211501.1 CDS Rahaq_0747 NC_015061.1 799988 800509 R KEGG: spe:Spro_3741 transcriptional repressor MprA; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR complement(799988..800509) Rahnella sp. Y9602 10211730 YP_004211502.1 CDS Rahaq_0748 NC_015061.1 800684 801022 R PFAM: branched-chain amino acid transport; KEGG: yen:YE3239 hypothetical protein; branched-chain amino acid transport complement(800684..801022) Rahnella sp. Y9602 10211731 YP_004211503.1 CDS Rahaq_0749 NC_015061.1 801012 801773 R PFAM: AzlC family protein; KEGG: ypb:YPTS_0901 AzlC family protein; AzlC family protein complement(801012..801773) Rahnella sp. Y9602 10211732 YP_004211504.1 CDS Rahaq_0750 NC_015061.1 801948 803132 R PFAM: major facilitator superfamily MFS_1; KEGG: ypz:YPZ3_2867 probable sugar transporter; major facilitator superfamily protein complement(801948..803132) Rahnella sp. Y9602 10211733 YP_004211505.1 CDS Rahaq_0751 NC_015061.1 803301 803732 R KEGG: plu:plu3021 hypothetical protein; hypothetical protein complement(803301..803732) Rahnella sp. Y9602 10211734 YP_004211506.1 CDS Rahaq_0752 NC_015061.1 803754 803936 R PFAM: YcfA family protein; KEGG: ecf:ECH74115_A0043 hypothetical protein; hypothetical protein complement(803754..803936) Rahnella sp. Y9602 10211735 YP_004211507.1 CDS Rahaq_0753 NC_015061.1 804053 805048 R PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: ecg:E2348C_2944 glycine betaine transporter periplasmic subunit; glycine betaine ABC transporter substrate-binding protein complement(804053..805048) Rahnella sp. Y9602 10211736 YP_004211508.1 CDS Rahaq_0754 NC_015061.1 805073 806083 R PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: ebi:EbC_22190 osmoprotectant transport protein OusBX; glycine betaine ABC transporter substrate-binding protein complement(805073..806083) Rahnella sp. Y9602 10211737 YP_004211509.1 CDS Rahaq_0755 NC_015061.1 806189 807388 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3734 glycine betaine transporter membrane protein; binding-protein-dependent transport system inner membrane protein complement(806189..807388) Rahnella sp. Y9602 10211738 YP_004211510.1 CDS Rahaq_0756 NC_015061.1 807385 808581 R TIGRFAM: glycine betaine/L-proline ABC transporter ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; KEGG: yen:YE0925 glycine betaine/L-proline transport ATP-binding protein; SMART: AAA ATPase; glycine betaine/L-proline ABC transporter ATPase complement(807385..808581) Rahnella sp. Y9602 10211739 YP_004211511.1 CDS Rahaq_0757 NC_015061.1 809170 809883 R KEGG: spe:Spro_3732 response regulator receiver/unknown domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver; fused response regulator receiver/hypothetical protein complement(809170..809883) Rahnella sp. Y9602 10211740 YP_004211512.1 CDS Rahaq_0758 NC_015061.1 809876 811528 R KEGG: spe:Spro_3731 signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; signal transduction histidine kinase regulating citrate/malate metabolism complement(809876..811528) Rahnella sp. Y9602 10211741 YP_004211513.1 CDS Rahaq_0759 NC_015061.1 811848 813203 D PFAM: Citrate carrier protein; KEGG: spe:Spro_3730 citrate carrier protein; citrate carrier protein 811848..813203 Rahnella sp. Y9602 10211742 YP_004211514.1 CDS Rahaq_0760 NC_015061.1 813398 813958 D PFAM: NLP/P60 protein; KEGG: ctu:Ctu_40060 lipoprotein spr; NLP/P60 protein 813398..813958 Rahnella sp. Y9602 10211743 YP_004211515.1 CDS Rahaq_0761 NC_015061.1 814006 815049 R PFAM: aldo/keto reductase; KEGG: ent:Ent638_3410 aldo-keto reductase; aldo/keto reductase complement(814006..815049) Rahnella sp. Y9602 10211744 YP_004211516.1 CDS Rahaq_0762 NC_015061.1 815167 816150 R KEGG: pct:PC1_3134 ribonucleotide-diphosphate reductase subunit beta; PFAM: ribonucleotide reductase; ribonucleoside-diphosphate reductase complement(815167..816150) Rahnella sp. Y9602 10211745 YP_004211517.1 CDS Rahaq_0763 NC_015061.1 816172 818334 R KEGG: ypb:YPTS_3074 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, subunit alpha; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase domain protein; Ribonucleotide reductase large subunit domain protein; ribonucleoside-diphosphate reductase subunit alpha complement(816172..818334) Rahnella sp. Y9602 10211746 YP_004211518.1 CDS Rahaq_0764 NC_015061.1 818316 818720 R KEGG: pwa:Pecwa_1147 ribonucleotide reductase stimulatory protein; TIGRFAM: NrdI protein; PFAM: NrdI family protein; NrdI protein complement(818316..818720) Rahnella sp. Y9602 10211747 YP_004211519.1 CDS Rahaq_0765 NC_015061.1 818731 818970 R KEGG: yen:YE0929 glutaredoxin; TIGRFAM: glutaredoxin-like protein NrdH; PFAM: glutaredoxin; glutaredoxin-like protein NrdH complement(818731..818970) Rahnella sp. Y9602 10211748 YP_004211520.1 CDS Rahaq_0766 NC_015061.1 819228 819659 R KEGG: spe:Spro_3720 alkylhydroperoxidase; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; alkylhydroperoxidase complement(819228..819659) Rahnella sp. Y9602 10211749 YP_004211521.1 CDS Rahaq_0767 NC_015061.1 819783 821234 D KEGG: yen:YE0931 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 819783..821234 Rahnella sp. Y9602 10211750 YP_004211522.1 CDS Rahaq_0768 NC_015061.1 821629 821934 R PFAM: protein of unknown function DUF883 ElaB; KEGG: spe:Spro_3718 hypothetical protein; hypothetical protein complement(821629..821934) Rahnella sp. Y9602 10211751 YP_004211523.1 CDS Rahaq_0769 NC_015061.1 822207 823403 D PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3711 major facilitator transporter; major facilitator superfamily protein 822207..823403 Rahnella sp. Y9602 10211752 YP_004211524.1 CDS Rahaq_0770 NC_015061.1 823530 823865 D PFAM: Protein of unknown function DUF2002; KEGG: spe:Spro_3710 hypothetical protein; hypothetical protein 823530..823865 Rahnella sp. Y9602 10211753 YP_004211525.1 CDS Rahaq_0771 NC_015061.1 823930 824817 R KEGG: gur:Gura_1217 transcription activator, effector binding; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(823930..824817) Rahnella sp. Y9602 10211754 YP_004211526.1 CDS Rahaq_0772 NC_015061.1 824944 825384 R PFAM: protein of unknown function DUF1198; KEGG: yen:YE0938 hypothetical protein; hypothetical protein complement(824944..825384) Rahnella sp. Y9602 10211755 YP_004211527.1 CDS Rahaq_0773 NC_015061.1 825544 826488 R KEGG: ecq:ECED1_1926 6-phosphofructokinase 2; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; 1-phosphofructokinase complement(825544..826488) Rahnella sp. Y9602 10211756 YP_004211528.1 CDS Rahaq_0774 NC_015061.1 826672 827202 D PFAM: adenylate cyclase; KEGG: reu:Reut_A0631 adenylate cyclase; adenylate cyclase 826672..827202 Rahnella sp. Y9602 10211757 YP_004211529.1 CDS Rahaq_0775 NC_015061.1 827251 828243 R KEGG: spe:Spro_3899 global regulator; TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); folate-binding protein YgfZ complement(827251..828243) Rahnella sp. Y9602 10211758 YP_004211530.1 CDS Rahaq_0776 NC_015061.1 828504 828788 D PFAM: protein of unknown function DUF339; KEGG: enc:ECL_04223 hypothetical protein; hypothetical protein 828504..828788 Rahnella sp. Y9602 10211759 YP_004211531.1 CDS Rahaq_0777 NC_015061.1 828769 829221 D KEGG: spe:Spro_3897 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1434; hypothetical protein 828769..829221 Rahnella sp. Y9602 10211760 YP_004211532.1 CDS Rahaq_0778 NC_015061.1 829267 829785 R KEGG: spe:Spro_3893 flavodoxin FldB; TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; flavodoxin complement(829267..829785) Rahnella sp. Y9602 10211761 YP_004211533.1 CDS Rahaq_0779 NC_015061.1 829885 830844 D KEGG: ypb:YPTS_3298 site-specific tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; tyrosine recombinase XerD 829885..830844 Rahnella sp. Y9602 10211762 YP_004211534.1 CDS Rahaq_0780 NC_015061.1 830870 831589 D PFAM: Disulphide bond isomerase, DsbC/G-like; KEGG: spe:Spro_3891 thiol:disulfide interchange protein DsbC; disulfide bond isomerase, DsbC/G-like protein 830870..831589 Rahnella sp. Y9602 10211763 YP_004211535.1 CDS Rahaq_0781 NC_015061.1 831596 833329 D KEGG: spe:Spro_3890 ssDNA exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; single-stranded-DNA-specific exonuclease RecJ 831596..833329 Rahnella sp. Y9602 10211764 YP_004211536.1 CDS Rahaq_0782 NC_015061.1 833460 834558 D manually curated; KEGG: ddd:Dda3937_02293 peptide chain release factor 2; Peptide chain release factor 2 join(833460..833534,833536..834558) Rahnella sp. Y9602 10211765 YP_004211537.1 CDS Rahaq_0783 NC_015061.1 834568 836097 D TIGRFAM: lysyl-tRNA synthetase; KEGG: yen:YE3374 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; lysyl-tRNA synthetase 834568..836097 Rahnella sp. Y9602 10211766 YP_004211538.1 CDS Rahaq_0784 NC_015061.1 836869 837120 D KEGG: spe:Spro_0470 transcriptional regulator, Nlp; Nlp family transcriptional regulator 836869..837120 Rahnella sp. Y9602 10211768 YP_004211539.1 CDS Rahaq_0785 NC_015061.1 837192 838553 R TIGRFAM: argininosuccinate synthase; KEGG: ypb:YPTS_1693 argininosuccinate synthase; PFAM: argininosuccinate synthase; argininosuccinate synthase complement(837192..838553) Rahnella sp. Y9602 10211769 YP_004211540.1 CDS Rahaq_0786 NC_015061.1 838704 839618 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pam:PANA_1889 CynR; LysR family transcriptional regulator complement(838704..839618) Rahnella sp. Y9602 10211770 YP_004211541.1 CDS Rahaq_0787 NC_015061.1 839738 840877 D PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bmd:BMD_0329 peptidase M20; peptidase M20 839738..840877 Rahnella sp. Y9602 10211771 YP_004211542.1 CDS Rahaq_0788 NC_015061.1 841243 841923 D PFAM: nucleoside recognition domain protein; KEGG: pam:PANA_1891 YjiH; nucleoside recognition domain-containing protein 841243..841923 Rahnella sp. Y9602 10211772 YP_004211543.1 CDS Rahaq_0789 NC_015061.1 841916 842383 D PFAM: nucleoside recognition domain protein; KEGG: pam:PANA_1892 YjiG; nucleoside recognition domain-containing protein 841916..842383 Rahnella sp. Y9602 10211773 YP_004211544.1 CDS Rahaq_0790 NC_015061.1 842431 843534 D KEGG: pam:PANA_1893 AmhX; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 842431..843534 Rahnella sp. Y9602 10211774 YP_004211545.1 CDS Rahaq_0791 NC_015061.1 843590 844066 R KEGG: yen:YE3361 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator complement(843590..844066) Rahnella sp. Y9602 10211775 YP_004211546.1 CDS Rahaq_0792 NC_015061.1 844199 844615 D PFAM: Protein of unknown function DUF2000; KEGG: yen:YE3360 hypothetical protein; hypothetical protein 844199..844615 Rahnella sp. Y9602 10211776 YP_004211547.1 CDS Rahaq_0793 NC_015061.1 844691 845875 R PFAM: major facilitator superfamily MFS_1; KEGG: ebi:EbC_20390 sugar efflux transporter; major facilitator superfamily protein complement(844691..845875) Rahnella sp. Y9602 10211777 YP_004211548.1 CDS Rahaq_0794 NC_015061.1 846038 846592 R KEGG: bpy:Bphyt_6644 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; Ribosomal-protein-alanine N-acetyltransferase complement(846038..846592) Rahnella sp. Y9602 10211778 YP_004211549.1 CDS Rahaq_0795 NC_015061.1 846644 847189 R PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: mms:mma_1576 D-alanyl-D-alanine carboxypeptidase; peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin complement(846644..847189) Rahnella sp. Y9602 10211779 YP_004211550.1 CDS Rahaq_0796 NC_015061.1 847186 848016 R PFAM: peptidase C26; KEGG: mag:amb4127 glutamine amidotransferase; peptidase C26 complement(847186..848016) Rahnella sp. Y9602 10211780 YP_004211551.1 CDS Rahaq_0797 NC_015061.1 848488 849831 D KEGG: ebi:EbC_35960 multidrug resistance protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 848488..849831 Rahnella sp. Y9602 10211781 YP_004211552.1 CDS Rahaq_0798 NC_015061.1 849828 853028 D PFAM: acriflavin resistance protein; KEGG: ebi:EbC_35950 multidrug resistance protein; acriflavin resistance protein 849828..853028 Rahnella sp. Y9602 10211782 YP_004211553.1 CDS Rahaq_0799 NC_015061.1 853029 856154 D PFAM: acriflavin resistance protein; KEGG: ebi:EbC_35940 multidrug resistance protein; acriflavin resistance protein 853029..856154 Rahnella sp. Y9602 10211783 YP_004211554.1 CDS Rahaq_0800 NC_015061.1 856147 857595 D KEGG: ebi:EbC_35930 RND efflux system, outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein 856147..857595 Rahnella sp. Y9602 10211784 YP_004211555.1 CDS Rahaq_0803 NC_015061.1 858363 858731 D KEGG: vsa:VSAL_I0282 hypothetical protein; hypothetical protein 858363..858731 Rahnella sp. Y9602 10211787 YP_004211556.1 CDS Rahaq_0804 NC_015061.1 859042 859311 D KEGG: xne:XNC1_2606 sugar fermentation stimulation protein B (Ner-like protein); Nlp family transcriptional regulator 859042..859311 Rahnella sp. Y9602 10211788 YP_004211557.1 CDS Rahaq_0805 NC_015061.1 859479 859736 D KEGG: ypi:YpsIP31758_0357 DNA-damage-inducible protein J; TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; RelB/DinJ family addiction module antitoxin 859479..859736 Rahnella sp. Y9602 10211789 YP_004211558.1 CDS Rahaq_0806 NC_015061.1 859740 860006 D manually curated; TIGRFAM: addiction module toxin, RelE/StbE family; KEGG: hde:HDEF_1232 addiction module toxin; PFAM: plasmid stabilization system; RelE/StbE family addiction module toxin 859740..860006 Rahnella sp. Y9602 10211790 YP_004211559.1 CDS Rahaq_0807 NC_015061.1 860066 861469 R KEGG: ebi:EbC_35970 RND efflux system, outer membrane protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein complement(860066..861469) Rahnella sp. Y9602 10211791 YP_004211560.1 CDS Rahaq_0808 NC_015061.1 861462 864611 R KEGG: ebi:EbC_35980 acriflavine resistance protein B; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(861462..864611) Rahnella sp. Y9602 10211792 YP_004211561.1 CDS Rahaq_0809 NC_015061.1 864621 865790 R KEGG: ebi:EbC_35990 acriflavine resistance protein A; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(864621..865790) Rahnella sp. Y9602 10211793 YP_004211562.1 CDS Rahaq_0810 NC_015061.1 866373 867974 D KEGG: ebi:EbC_23460 PTS system, maltose and glucose-specific IIbc component; TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; PTS system glucose-like transporter subunit IIB 866373..867974 Rahnella sp. Y9602 10211794 YP_004211563.1 CDS Rahaq_0811 NC_015061.1 867981 868721 R KEGG: eat:EAT1b_2257 phophonate C-P lyase system transcriptional regulator PhnF, GntR family; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(867981..868721) Rahnella sp. Y9602 10211795 YP_004211564.1 CDS Rahaq_0812 NC_015061.1 868905 870659 R KEGG: spe:Spro_3843 ABC transporter; PFAM: ABC transporter; ABC transporter related; SMART: AAA ATPase; ABC transporter complement(868905..870659) Rahnella sp. Y9602 10211796 YP_004211565.1 CDS Rahaq_0813 NC_015061.1 870789 871505 D KEGG: spe:Spro_3842 hypothetical protein; hypothetical protein 870789..871505 Rahnella sp. Y9602 10211797 YP_004211566.1 CDS Rahaq_0814 NC_015061.1 871668 872537 R KEGG: spe:Spro_3840 beta-lactamase domain-containing protein; beta-lactamase domain-containing protein complement(871668..872537) Rahnella sp. Y9602 10211798 YP_004211567.1 CDS Rahaq_0815 NC_015061.1 872653 873570 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pwa:Pecwa_3627 transcriptional regulator, LysR family; LysR family transcriptional regulator 872653..873570 Rahnella sp. Y9602 10211799 YP_004211568.1 CDS Rahaq_0816 NC_015061.1 873791 874954 D PFAM: major facilitator superfamily MFS_1; KEGG: ypy:YPK_1022 major facilitator transporter; major facilitator superfamily protein 873791..874954 Rahnella sp. Y9602 10211800 YP_004211569.1 CDS Rahaq_0817 NC_015061.1 875019 875942 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3837 DNA-binding transcriptional regulator LysR; LysR family transcriptional regulator complement(875019..875942) Rahnella sp. Y9602 10211801 YP_004211570.1 CDS Rahaq_0818 NC_015061.1 876077 877336 D KEGG: spe:Spro_3836 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; diaminopimelate decarboxylase 876077..877336 Rahnella sp. Y9602 10211802 YP_004211571.1 CDS Rahaq_0819 NC_015061.1 877501 877818 R PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: dda:Dd703_0755 phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; phosphotransferase system PTS lactose/cellobiose-specific IIA subunit complement(877501..877818) Rahnella sp. Y9602 10211803 YP_004211572.1 CDS Rahaq_0820 NC_015061.1 878096 879439 D TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; KEGG: eca:ECA3647 PTS system, lichenan-specific IIC component; PFAM: phosphotransferase system EIIC; PTS system lactose/cellobiose family transporter subunit IIC 878096..879439 Rahnella sp. Y9602 10211804 YP_004211573.1 CDS Rahaq_0821 NC_015061.1 879464 880900 D PFAM: glycoside hydrolase family 1; KEGG: dze:Dd1591_0737 glycoside hydrolase family 1; glycoside hydrolase 879464..880900 Rahnella sp. Y9602 10211805 YP_004211574.1 CDS Rahaq_0822 NC_015061.1 880915 881232 D PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: ddc:Dd586_3406 phosphotransferase system lactose/cellobiose-specific IIB subunit; PTS system lactose/cellobiose-specific transporter subunit IIB 880915..881232 Rahnella sp. Y9602 10211806 YP_004211575.1 CDS Rahaq_0823 NC_015061.1 881271 882044 D KEGG: ebi:EbC_36060 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 881271..882044 Rahnella sp. Y9602 10211807 YP_004211576.1 CDS Rahaq_0824 NC_015061.1 882050 882499 D PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_3833 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 882050..882499 Rahnella sp. Y9602 10211808 YP_004211577.1 CDS Rahaq_0825 NC_015061.1 882496 883503 R KEGG: ypb:YPTS_3166 DNA-binding transcriptional regulator GalR; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator complement(882496..883503) Rahnella sp. Y9602 10211809 YP_004211578.1 CDS Rahaq_0826 NC_015061.1 883756 886014 D KEGG: spe:Spro_3831 molybdopterin oxidoreductase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; trimethylamine-N-oxide reductase (cytochrome c) 883756..886014 Rahnella sp. Y9602 10211810 YP_004211579.1 CDS Rahaq_0827 NC_015061.1 886372 888537 D KEGG: ypb:YPTS_3164 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; AMP-dependent synthetase/ligase 886372..888537 Rahnella sp. Y9602 10211811 YP_004211580.1 CDS Rahaq_0828 NC_015061.1 888534 889745 D PFAM: major facilitator superfamily MFS_1; KEGG: ypb:YPTS_3163 lysophospholipid transporter LplT; major facilitator superfamily protein 888534..889745 Rahnella sp. Y9602 10211812 YP_004211581.1 CDS Rahaq_0829 NC_015061.1 889808 890848 R PFAM: aldo/keto reductase; KEGG: pct:PC1_0899 aldo-keto reductase; aldo/keto reductase complement(889808..890848) Rahnella sp. Y9602 10211813 YP_004211582.1 CDS Rahaq_0830 NC_015061.1 891033 891254 R PFAM: protein of unknown function DUF903; KEGG: spe:Spro_3827 hypothetical protein; hypothetical protein complement(891033..891254) Rahnella sp. Y9602 10211814 YP_004211583.1 CDS Rahaq_0831 NC_015061.1 891338 892024 R KEGG: dda:Dd703_3019 DNA mismatch repair protein; TIGRFAM: DNA mismatch repair endonuclease mutH; PFAM: DNA mismatch repair protein MutH, conserved region; DNA mismatch repair endonuclease mutH complement(891338..892024) Rahnella sp. Y9602 10211815 YP_004211584.1 CDS Rahaq_0832 NC_015061.1 892720 893247 D KEGG: spe:Spro_3824 dinucleoside polyphosphate hydrolase; manually curated; PFAM: NUDIX hydrolase; NUDIX hydrolase 892720..893247 Rahnella sp. Y9602 10211816 YP_004211585.1 CDS Rahaq_0833 NC_015061.1 893259 895505 D SMART: GAF domain protein; manually curated; KEGG: spe:Spro_3823 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; GAF domain protein; PEP-utilising protein mobile region; protein PtsP 893259..895505 Rahnella sp. Y9602 10211817 YP_004211586.1 CDS Rahaq_0834 NC_015061.1 895688 896557 D KEGG: spe:Spro_3822 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 895688..896557 Rahnella sp. Y9602 10211818 YP_004211587.1 CDS Rahaq_0835 NC_015061.1 896564 897358 D TIGRFAM: thymidylate synthase; KEGG: spe:Spro_3821 thymidylate synthase; PFAM: thymidylate synthase; thymidylate synthase 896564..897358 Rahnella sp. Y9602 10211819 YP_004211588.1 CDS Rahaq_0836 NC_015061.1 897640 898101 D KEGG: spe:Spro_3820 hypothetical protein; hypothetical protein 897640..898101 Rahnella sp. Y9602 10211820 YP_004211589.1 CDS Rahaq_0837 NC_015061.1 898092 898679 D KEGG: pwa:Pecwa_3394 hypothetical protein; hypothetical protein 898092..898679 Rahnella sp. Y9602 10211821 YP_004211590.1 CDS Rahaq_0838 NC_015061.1 898724 899161 D PFAM: Protein of unknown function DUF2509; KEGG: pwa:Pecwa_3393 protein of unknown function DUF2509; hypothetical protein 898724..899161 Rahnella sp. Y9602 10211822 YP_004211591.1 CDS Rahaq_0839 NC_015061.1 899154 899498 D KEGG: spe:Spro_3817 prepilin peptidase dependent protein c precursor; prepilin peptidase dependent protein c 899154..899498 Rahnella sp. Y9602 10211823 YP_004211592.1 CDS Rahaq_0840 NC_015061.1 899801 902686 D PFAM: peptidase M16 domain protein; KEGG: spe:Spro_3815 peptidase M16 domain-containing protein; peptidase M16 domain-containing protein 899801..902686 Rahnella sp. Y9602 10211824 YP_004211593.1 CDS Rahaq_0841 NC_015061.1 902763 904088 R KEGG: ypb:YPTS_3145 N-acetylglutamate synthase; TIGRFAM: amino-acid N-acetyltransferase; PFAM: aspartate/glutamate/uridylate kinase; GCN5-related N-acetyltransferase; amino-acid N-acetyltransferase complement(902763..904088) Rahnella sp. Y9602 10211825 YP_004211594.1 CDS Rahaq_0842 NC_015061.1 904317 905567 D KEGG: yen:YE3307 N-acetylmuramoyl-L-alanine amidase AmiC precursor; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; cell wall hydrolase/autolysin 904317..905567 Rahnella sp. Y9602 10211826 YP_004211595.1 CDS Rahaq_0843 NC_015061.1 906103 907215 D PFAM: MltA domain protein; 3D domain-containing protein; KEGG: spe:Spro_3810 murein transglycosylase A; MltA domain-containing protein 906103..907215 Rahnella sp. Y9602 10211829 YP_004211596.1 CDS Rahaq_0844 NC_015061.1 907261 908076 D PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: ypb:YPTS_3142 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein 907261..908076 Rahnella sp. Y9602 10211830 YP_004211597.1 CDS Rahaq_0845 NC_015061.1 908064 908498 R KEGG: yen:YE3304 hypothetical protein; TIGRFAM: cysteine desulfurase, sulfur acceptor subunit CsdE; PFAM: Fe-S metabolism associated SufE; cysteine desulfurase, sulfur acceptor subunit CsdE complement(908064..908498) Rahnella sp. Y9602 10211831 YP_004211598.1 CDS Rahaq_0846 NC_015061.1 908519 909724 R PFAM: aminotransferase class V; KEGG: spe:Spro_3807 cysteine sulfinate desulfinase; class V aminotransferase complement(908519..909724) Rahnella sp. Y9602 10211832 YP_004211599.1 CDS Rahaq_0847 NC_015061.1 909912 910133 D PFAM: protein of unknown function DUF903; KEGG: yen:YE3302 lipoprotein; hypothetical protein 909912..910133 Rahnella sp. Y9602 10211833 YP_004211600.1 CDS Rahaq_0848 NC_015061.1 910618 911538 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3805 DNA-binding transcriptional activator GcvA; LysR family transcriptional regulator 910618..911538 Rahnella sp. Y9602 10211834 YP_004211601.1 CDS Rahaq_0849 NC_015061.1 911626 912021 D PFAM: protein of unknown function DUF423; KEGG: ebi:EbC_35660 hypothetical protein; hypothetical protein 911626..912021 Rahnella sp. Y9602 10211835 YP_004211602.1 CDS Rahaq_0850 NC_015061.1 912014 913120 D KEGG: spe:Spro_3803 RNA 2'-O-ribose methyltransferase; RNA 2'-O-ribose methyltransferase 912014..913120 Rahnella sp. Y9602 10211836 YP_004211603.1 CDS Rahaq_0851 NC_015061.1 913251 914003 R KEGG: spe:Spro_3802 exonuclease IX; PFAM: 5'-3' exonuclease, SAM-fold domain; 5'-3' exonuclease, N-terminal resolvase-like domain; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; 5'-3' exonuclease complement(913251..914003) Rahnella sp. Y9602 10211837 YP_004211604.1 CDS Rahaq_0852 NC_015061.1 914082 915446 R PFAM: Conserved hypothetical protein CHP00730; KEGG: spe:Spro_3801 hypothetical protein; hypothetical protein complement(914082..915446) Rahnella sp. Y9602 10211838 YP_004211605.1 CDS Rahaq_0853 NC_015061.1 915617 916462 R TIGRFAM: 7-cyano-7-deazaguanine reductase; KEGG: yen:YE3295 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; 7-cyano-7-deazaguanine reductase complement(915617..916462) Rahnella sp. Y9602 10211839 YP_004211606.1 CDS Rahaq_0854 NC_015061.1 916539 917090 D PFAM: Syd family protein; KEGG: ypb:YPTS_3132 SecY interacting protein Syd; Syd family protein 916539..917090 Rahnella sp. Y9602 10211840 YP_004211607.1 CDS Rahaq_0855 NC_015061.1 917749 918987 R PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3798 major facilitator transporter; major facilitator superfamily protein complement(917749..918987) Rahnella sp. Y9602 10211841 YP_004211608.1 CDS Rahaq_0856 NC_015061.1 919178 919492 D PFAM: protein of unknown function DUF446; KEGG: yen:YE3291 hypothetical protein; hypothetical protein 919178..919492 Rahnella sp. Y9602 10211842 YP_004211609.1 CDS Rahaq_0857 NC_015061.1 919494 920273 D PFAM: pseudouridine synthase; KEGG: yen:YE3290 tRNA pseudouridine synthase C; pseudouridine synthase 919494..920273 Rahnella sp. Y9602 10211843 YP_004211610.1 CDS Rahaq_0858 NC_015061.1 920316 920765 D PFAM: flavodoxin/nitric oxide synthase; KEGG: spe:Spro_3795 flavodoxin; flavodoxin/nitric oxide synthase 920316..920765 Rahnella sp. Y9602 10211844 YP_004211611.1 CDS Rahaq_0859 NC_015061.1 920858 921247 R KEGG: spe:Spro_3794 hypothetical protein; hypothetical protein complement(920858..921247) Rahnella sp. Y9602 10211845 YP_004211612.1 CDS Rahaq_0860 NC_015061.1 921392 922216 R TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; KEGG: seh:SeHA_C0250 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase complement(921392..922216) Rahnella sp. Y9602 10211846 YP_004211613.1 CDS Rahaq_0861 NC_015061.1 922263 924953 R SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: protein-P-II uridylyltransferase; KEGG: spe:Spro_3792 PII uridylyl-transferase; PFAM: GlnD PII-uridylyltransferase; DNA polymerase beta domain protein region; metal-dependent phosphohydrolase HD sub domain; amino acid-binding ACT domain protein; UTP-GlnB uridylyltransferase, GlnD complement(922263..924953) Rahnella sp. Y9602 10211847 YP_004211614.1 CDS Rahaq_0862 NC_015061.1 925063 925854 R TIGRFAM: methionine aminopeptidase, type I; KEGG: spe:Spro_3791 methionine aminopeptidase; PFAM: peptidase M24; methionine aminopeptidase complement(925063..925854) Rahnella sp. Y9602 10211848 YP_004211615.1 CDS Rahaq_0863 NC_015061.1 926222 926947 D KEGG: ent:Ent638_0707 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; 30S ribosomal protein S2 926222..926947 Rahnella sp. Y9602 10211849 YP_004211616.1 CDS Rahaq_0864 NC_015061.1 927095 927946 D KEGG: spe:Spro_3789 elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein; translation elongation factor Ts 927095..927946 Rahnella sp. Y9602 10211850 YP_004211617.1 CDS Rahaq_0865 NC_015061.1 928107 928838 D KEGG: ypb:YPTS_3121 uridylate kinase; TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; uridylate kinase 928107..928838 Rahnella sp. Y9602 10211851 YP_004211618.1 CDS Rahaq_0866 NC_015061.1 928947 929504 D KEGG: ebi:EbC_08130 ribosome recycling factor; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor; ribosome recycling factor 928947..929504 Rahnella sp. Y9602 10211852 YP_004211619.1 CDS Rahaq_0867 NC_015061.1 929663 930859 D TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: spe:Spro_3786 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain-containing protein; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 929663..930859 Rahnella sp. Y9602 10211853 YP_004211620.1 CDS Rahaq_0868 NC_015061.1 931149 931907 D TIGRFAM: undecaprenyl diphosphate synthase; KEGG: spe:Spro_3785 undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase 931149..931907 Rahnella sp. Y9602 10211854 YP_004211621.1 CDS Rahaq_0869 NC_015061.1 931917 932765 D PFAM: phosphatidate cytidylyltransferase; KEGG: spe:Spro_3784 CDP-diglyceride synthase; phosphatidate cytidylyltransferase 931917..932765 Rahnella sp. Y9602 10211855 YP_004211622.1 CDS Rahaq_0870 NC_015061.1 932808 934163 D TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: yen:YE3277 zinc metallopeptidase RseP; SMART: PDZ/DHR/GLGF domain protein; membrane-associated zinc metalloprotease 932808..934163 Rahnella sp. Y9602 10211856 YP_004211623.1 CDS Rahaq_0871 NC_015061.1 934200 936620 D KEGG: pct:PC1_0949 outer membrane protein assembly factor YaeT; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; outer membrane protein assembly complex, YaeT protein 934200..936620 Rahnella sp. Y9602 10211857 YP_004211624.1 CDS Rahaq_0872 NC_015061.1 936773 937270 D PFAM: outer membrane chaperone Skp (OmpH); KEGG: spe:Spro_3781 periplasmic chaperone; outer membrane chaperone Skp 936773..937270 Rahnella sp. Y9602 10211858 YP_004211625.1 CDS Rahaq_0873 NC_015061.1 937273 938295 D KEGG: yen:YE3274 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 937273..938295 Rahnella sp. Y9602 10211859 YP_004211626.1 CDS Rahaq_0874 NC_015061.1 938443 938898 D KEGG: pct:PC1_0952 (3R)-hydroxymyristoyl-ACP dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 938443..938898 Rahnella sp. Y9602 10211860 YP_004211627.1 CDS Rahaq_0875 NC_015061.1 938902 939690 D TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: pwa:Pecwa_3348 UDP-N-acetylglucosamine acyltransferase; PFAM: transferase hexapeptide repeat containing protein; acyl-ACP-UDP-N- acetylglucosamine O-acyltransferase 938902..939690 Rahnella sp. Y9602 10211861 YP_004211628.1 CDS Rahaq_0876 NC_015061.1 939709 940857 D TIGRFAM: lipid-A-disaccharide synthase; KEGG: spe:Spro_3777 lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19; lipid-A-disaccharide synthase 939709..940857 Rahnella sp. Y9602 10211862 YP_004211629.1 CDS Rahaq_0877 NC_015061.1 940854 941450 D KEGG: dda:Dd703_2966 ribonuclease HII; PFAM: ribonuclease HII/HIII; Ribonuclease H 940854..941450 Rahnella sp. Y9602 10211863 YP_004211630.1 CDS Rahaq_0878 NC_015061.1 941534 945016 D SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, subunit alpha; KEGG: spe:Spro_3775 DNA polymerase III subunit alpha; PFAM: DNA polymerase III subunit alpha; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III subunit alpha 941534..945016 Rahnella sp. Y9602 10211864 YP_004211631.1 CDS Rahaq_0879 NC_015061.1 945029 945988 D TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, subunit alpha; KEGG: spe:Spro_3774 acetyl-CoA carboxylase carboxyltransferase subunit alpha; PFAM: Acetyl-CoA carboxylase, subunit alpha, conserved region; acetyl-CoA carboxylase, carboxyl transferase, subunit alpha 945029..945988 Rahnella sp. Y9602 10211865 YP_004211632.1 CDS Rahaq_0880 NC_015061.1 946178 948325 D KEGG: spe:Spro_3773 lysine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; lysine decarboxylase 946178..948325 Rahnella sp. Y9602 10211866 YP_004211633.1 CDS Rahaq_0881 NC_015061.1 948355 948801 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: spe:Spro_3770 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase 948355..948801 Rahnella sp. Y9602 10211867 YP_004211634.1 CDS Rahaq_0882 NC_015061.1 948809 950152 D KEGG: spe:Spro_3765 tRNA(Ile)-lysidine synthetase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: Protein of unkown function DUF1946 PP-loop ATpase; PP-loop domain protein; tRNA(Ile)-lysidine synthetase 948809..950152 Rahnella sp. Y9602 10211868 YP_004211635.1 CDS Rahaq_0883 NC_015061.1 950207 950536 D PFAM: cytochrome c class I; KEGG: spe:Spro_3764 cytochrome c class I; cytochrome c class I 950207..950536 Rahnella sp. Y9602 10211869 YP_004211636.1 CDS Rahaq_0884 NC_015061.1 950603 950863 R PFAM: Modulator of Rho-dependent transcription termination; KEGG: yen:YE3263 Rho-binding antiterminator; transcriptional antiterminator Rof complement(950603..950863) Rahnella sp. Y9602 10211870 YP_004211637.1 CDS Rahaq_0885 NC_015061.1 950850 951050 R PFAM: protein of unknown function UPF0253; KEGG: spe:Spro_3762 hypothetical protein; hypothetical protein complement(950850..951050) Rahnella sp. Y9602 10211871 YP_004211638.1 CDS Rahaq_0886 NC_015061.1 951266 951826 D PFAM: YaeQ family protein; KEGG: spe:Spro_3761 YaeQ family protein; YaeQ family protein 951266..951826 Rahnella sp. Y9602 10211872 YP_004211639.1 CDS Rahaq_0887 NC_015061.1 951832 952242 D PFAM: Class I peptide chain release factor; KEGG: yen:YE3260 peptidyl-tRNA hydrolase domain protein; class I peptide chain release factor 951832..952242 Rahnella sp. Y9602 10211873 YP_004211640.1 CDS Rahaq_0888 NC_015061.1 952308 952985 D KEGG: spe:Spro_3759 lipoprotein involved with copper homeostasis and adhesion; lipoprotein involved with copper homeostasis and adhesion 952308..952985 Rahnella sp. Y9602 10211874 YP_004211641.1 CDS Rahaq_0889 NC_015061.1 953072 954790 R KEGG: yen:YE3258 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon-binding domain protein; prolyl-tRNA synthetase complement(953072..954790) Rahnella sp. Y9602 10211875 YP_004211642.1 CDS Rahaq_0890 NC_015061.1 954909 955616 R PFAM: Uncharacterised protein family UPF0066; KEGG: spe:Spro_3757 hypothetical protein; hypothetical protein complement(954909..955616) Rahnella sp. Y9602 10211876 YP_004211643.1 CDS Rahaq_0891 NC_015061.1 955613 956020 R KEGG: yen:YE3256 outer membrane lipoprotein; outer membrane lipoprotein complement(955613..956020) Rahnella sp. Y9602 10211877 YP_004211644.1 CDS Rahaq_0892 NC_015061.1 956207 957022 R KEGG: spe:Spro_3755 DL-methionine transporter substrate-binding subunit; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; lipoprotein complement(956207..957022) Rahnella sp. Y9602 10211878 YP_004211645.1 CDS Rahaq_0893 NC_015061.1 957084 957737 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3754 DL-methionine transporter permease subunit; binding-protein-dependent transport system inner membrane protein complement(957084..957737) Rahnella sp. Y9602 10211879 YP_004211646.1 CDS Rahaq_0894 NC_015061.1 957730 958761 R TIGRFAM: D-methionine ABC transporter ATPase subunit; PFAM: ABC transporter related; NIL domain; KEGG: spe:Spro_3753 DL-methionine transporter ATP-binding subunit; SMART: AAA ATPase; D-methionine ABC transporter ATPase complement(957730..958761) Rahnella sp. Y9602 10211880 YP_004211647.1 CDS Rahaq_0895 NC_015061.1 958941 959507 D KEGG: ecz:ECS88_0212 D,D-heptose 1,7-bisphosphate phosphatase; TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase; D,D-heptose 1,7-bisphosphate phosphatase 958941..959507 Rahnella sp. Y9602 10211881 YP_004211648.1 CDS Rahaq_0896 NC_015061.1 965627 966352 D KEGG: yen:YE0896 hypothetical protein; hypothetical protein 965627..966352 Rahnella sp. Y9602 10211887 YP_004211649.1 CDS Rahaq_0897 NC_015061.1 966352 967164 D manually curated; PFAM: phospholipid/glycerol acyltransferase; KEGG: spe:Spro_0889 phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 966352..967164 Rahnella sp. Y9602 10211888 YP_004211650.1 CDS Rahaq_0898 NC_015061.1 967168 967425 D KEGG: spe:Spro_0890 acyl carrier protein; acyl carrier protein 967168..967425 Rahnella sp. Y9602 10211889 YP_004211651.1 CDS Rahaq_0899 NC_015061.1 967436 967690 D PFAM: phosphopantetheine-binding; KEGG: spe:Spro_0891 acyl carrier protein; phosphopantetheine-binding protein 967436..967690 Rahnella sp. Y9602 10211890 YP_004211652.1 CDS Rahaq_0900 NC_015061.1 967696 968301 D KEGG: spe:Spro_0892 inner membrane protein; inner membrane protein 967696..968301 Rahnella sp. Y9602 10211891 YP_004211653.1 CDS Rahaq_0901 NC_015061.1 968298 969647 D PFAM: AMP-dependent synthetase and ligase; KEGG: spe:Spro_0893 AMP-binding protein; AMP-dependent synthetase/ligase 968298..969647 Rahnella sp. Y9602 10211892 YP_004211654.1 CDS Rahaq_0902 NC_015061.1 969644 969988 D PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: spe:Spro_0894 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 969644..969988 Rahnella sp. Y9602 10211893 YP_004211655.1 CDS Rahaq_0903 NC_015061.1 969988 971700 D PFAM: glycosyl transferase family 2; KEGG: spe:Spro_0895 glycosyl transferase family protein; family 2 glycosyl transferase 969988..971700 Rahnella sp. Y9602 10211894 YP_004211656.1 CDS Rahaq_0904 NC_015061.1 971702 972145 D PFAM: thioesterase superfamily protein; KEGG: enc:ECL_04848 thioesterase superfamily protein; thioesterase superfamily protein 971702..972145 Rahnella sp. Y9602 10211895 YP_004211657.1 CDS Rahaq_0905 NC_015061.1 972142 972747 D KEGG: spe:Spro_0897 outer-membrane lipoprotein carrier protein; outer-membrane lipoprotein carrier protein 972142..972747 Rahnella sp. Y9602 10211896 YP_004211658.1 CDS Rahaq_0906 NC_015061.1 972737 975043 D KEGG: spe:Spro_0898 inner membrane protein; inner membrane protein 972737..975043 Rahnella sp. Y9602 10211897 YP_004211659.1 CDS Rahaq_0907 NC_015061.1 975040 975615 D KEGG: spe:Spro_0899 lipoprotein; lipoprotein 975040..975615 Rahnella sp. Y9602 10211898 YP_004211660.1 CDS Rahaq_0908 NC_015061.1 975617 976789 D PFAM: Beta-ketoacyl synthase; KEGG: spe:Spro_0900 3-oxoacyl-(acyl carrier protein) synthase I; Beta-ketoacyl synthase 975617..976789 Rahnella sp. Y9602 10211899 YP_004211661.1 CDS Rahaq_0909 NC_015061.1 976786 977265 D KEGG: spe:Spro_0901 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 976786..977265 Rahnella sp. Y9602 10211900 YP_004211662.1 CDS Rahaq_0910 NC_015061.1 977262 977993 D KEGG: spe:Spro_0902 3-ketoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 977262..977993 Rahnella sp. Y9602 10211901 YP_004211663.1 CDS Rahaq_0911 NC_015061.1 977990 979219 D PFAM: Beta-ketoacyl synthase; KEGG: spe:Spro_0903 3-oxoacyl-(acyl carrier protein) synthase II; Beta-ketoacyl synthase 977990..979219 Rahnella sp. Y9602 10211902 YP_004211664.1 CDS Rahaq_0912 NC_015061.1 979222 979908 D KEGG: ent:Ent638_3900 holo-(acyl carrier protein) synthase 2; hypothetical protein 979222..979908 Rahnella sp. Y9602 10211903 YP_004211665.1 CDS Rahaq_0913 NC_015061.1 980022 980825 D PFAM: aldo/keto reductase; KEGG: spe:Spro_0904 2,5-diketo-D-gluconate reductase B; aldo/keto reductase 980022..980825 Rahnella sp. Y9602 10211904 YP_004211666.1 CDS Rahaq_0914 NC_015061.1 980866 981762 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_0905 LysR family transcriptional regulator; LysR family transcriptional regulator complement(980866..981762) Rahnella sp. Y9602 10211905 YP_004211667.1 CDS Rahaq_0915 NC_015061.1 981869 983044 D PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_0906 major facilitator transporter; major facilitator superfamily protein 981869..983044 Rahnella sp. Y9602 10211906 YP_004211668.1 CDS Rahaq_0916 NC_015061.1 983239 984039 D KEGG: ctu:Ctu_08330 hypothetical protein; manually curated; PFAM: Endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 983239..984039 Rahnella sp. Y9602 10211907 YP_004211669.1 CDS Rahaq_0917 NC_015061.1 984126 985514 R KEGG: pct:PC1_3139 membrane-bound lytic murein transglycosylase D; PFAM: lytic transglycosylase catalytic; MLTD_N domain protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; lytic transglycosylase complement(984126..985514) Rahnella sp. Y9602 10211908 YP_004211670.1 CDS Rahaq_0918 NC_015061.1 985584 986339 R TIGRFAM: hydroxyacylglutathione hydrolase; KEGG: spe:Spro_0909 hydroxyacylglutathione hydrolase; hydroxyacylglutathione hydrolase complement(985584..986339) Rahnella sp. Y9602 10211909 YP_004211671.1 CDS Rahaq_0919 NC_015061.1 986383 987108 D PFAM: methyltransferase type 11; KEGG: spe:Spro_0910 methyltransferase type 11; type 11 methyltransferase 986383..987108 Rahnella sp. Y9602 10211910 YP_004211672.1 CDS Rahaq_0920 NC_015061.1 987169 987636 R KEGG: spe:Spro_0911 ribonuclease H; PFAM: ribonuclease H; Ribonuclease H complement(987169..987636) Rahnella sp. Y9602 10211911 YP_004211673.1 CDS Rahaq_0921 NC_015061.1 987897 988781 D KEGG: eca:ECA4274 carbon-nitrogen hydrolase; TIGRFAM: N-carbamoylputrescine amidase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; N-carbamoylputrescine amidase 987897..988781 Rahnella sp. Y9602 10211912 YP_004211674.1 CDS Rahaq_0922 NC_015061.1 988785 989870 D TIGRFAM: agmatine deiminase; KEGG: pwa:Pecwa_0168 agmatine deiminase; PFAM: Porphyromonas-type peptidyl-arginine deiminase; agmatine deiminase 988785..989870 Rahnella sp. Y9602 10211913 YP_004211675.1 CDS Rahaq_0923 NC_015061.1 989952 990689 D SMART: Exonuclease; TIGRFAM: DNA polymerase III, subunit epsilon; KEGG: eca:ECA3339 DNA polymerase III subunit epsilon; PFAM: Exonuclease RNase T and DNA polymerase III; DNA polymerase III subunit epsilon 989952..990689 Rahnella sp. Y9602 10211914 YP_004211676.1 CDS Rahaq_0924 NC_015061.1 990977 992479 R PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: dda:Dd703_0898 permease for cytosine/purines uracil thiamine allantoin; cytosine/purines uracil thiamine allantoin permease complement(990977..992479) Rahnella sp. Y9602 10211916 YP_004211677.1 CDS Rahaq_0925 NC_015061.1 992657 993391 D KEGG: ddd:Dda3937_00905 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 992657..993391 Rahnella sp. Y9602 10211917 YP_004211678.1 CDS Rahaq_0926 NC_015061.1 993391 994149 D KEGG: spe:Spro_0915 Asp/Glu racemase; PFAM: Asp/Glu/hydantoin racemase; hydantoin racemase 993391..994149 Rahnella sp. Y9602 10211918 YP_004211679.1 CDS Rahaq_0927 NC_015061.1 994142 995080 D TIGRFAM: urate catabolism protein; KEGG: spe:Spro_0916 chitin deacetylase; PFAM: polysaccharide deacetylase; urate catabolism protein 994142..995080 Rahnella sp. Y9602 10211919 YP_004211680.1 CDS Rahaq_0928 NC_015061.1 995707 996090 R KEGG: spe:Spro_0927 hypothetical protein; hypothetical protein complement(995707..996090) Rahnella sp. Y9602 10211920 YP_004211681.1 CDS Rahaq_0929 NC_015061.1 996145 997548 R KEGG: ypy:YPK_3332 amidase; TIGRFAM: amidohydrolase, AtzE family; PFAM: Amidase; amidohydrolase complement(996145..997548) Rahnella sp. Y9602 10211921 YP_004211682.1 CDS Rahaq_0930 NC_015061.1 997545 997739 R KEGG: spe:Spro_0929 hypothetical protein; hypothetical protein complement(997545..997739) Rahnella sp. Y9602 10211922 YP_004211683.1 CDS Rahaq_0931 NC_015061.1 997776 999362 R TIGRFAM: gamma-glutamyltransferase; KEGG: spe:Spro_0930 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase complement(997776..999362) Rahnella sp. Y9602 10211923 YP_004211684.1 CDS Rahaq_0932 NC_015061.1 999561 1000400 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: spe:Spro_0931 RpiR family transcriptional regulator; RpiR family transcriptional regulator 999561..1000400 Rahnella sp. Y9602 10211924 YP_004211685.1 CDS Rahaq_0933 NC_015061.1 1000659 1001450 D KEGG: pam:PANA_0860 FliY; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 1000659..1001450 Rahnella sp. Y9602 10211925 YP_004211686.1 CDS Rahaq_0934 NC_015061.1 1001475 1002140 D KEGG: pwa:Pecwa_3468 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 1001475..1002140 Rahnella sp. Y9602 10211926 YP_004211687.1 CDS Rahaq_0935 NC_015061.1 1002140 1002793 D KEGG: pct:PC1_3311 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 1002140..1002793 Rahnella sp. Y9602 10211927 YP_004211688.1 CDS Rahaq_0936 NC_015061.1 1002793 1003545 D KEGG: spe:Spro_0935 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1002793..1003545 Rahnella sp. Y9602 10211928 YP_004211689.1 CDS Rahaq_0937 NC_015061.1 1003564 1004802 D PFAM: aminotransferase class V; KEGG: spe:Spro_0936 aminotransferase class V; class V aminotransferase 1003564..1004802 Rahnella sp. Y9602 10211929 YP_004211690.1 CDS Rahaq_0938 NC_015061.1 1004802 1006076 D TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: ypi:YpsIP31758_3185 allantoate amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidase 1004802..1006076 Rahnella sp. Y9602 10211930 YP_004211691.1 CDS Rahaq_0939 NC_015061.1 1006073 1006567 D KEGG: ddd:Dda3937_02651 uricase; TIGRFAM: OHCU decarboxylase; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; OHCU decarboxylase 1006073..1006567 Rahnella sp. Y9602 10211931 YP_004211692.1 CDS Rahaq_0940 NC_015061.1 1006567 1006902 D KEGG: spe:Spro_0939 transthyretin; TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; hydroxyisourate hydrolase 1006567..1006902 Rahnella sp. Y9602 10211932 YP_004211693.1 CDS Rahaq_0941 NC_015061.1 1006916 1008184 R PFAM: glutamine amidotransferase class-I; KEGG: ara:Arad_7095 CTP synthase protein; glutamine amidotransferase complement(1006916..1008184) Rahnella sp. Y9602 10211933 YP_004211694.1 CDS Rahaq_0942 NC_015061.1 1008398 1008904 D PFAM: Domain of unknown function DUF1993; KEGG: rme:Rmet_1570 hypothetical protein; hypothetical protein 1008398..1008904 Rahnella sp. Y9602 10211934 YP_004211695.1 CDS Rahaq_0943 NC_015061.1 1008957 1009730 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: spe:Spro_0940 hypothetical protein; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(1008957..1009730) Rahnella sp. Y9602 10211935 YP_004211696.1 CDS Rahaq_0944 NC_015061.1 1009718 1010878 R PFAM: aminotransferase class I and II; KEGG: yen:YE3234 aminotransferase; class I and II aminotransferase complement(1009718..1010878) Rahnella sp. Y9602 10211936 YP_004211697.1 CDS Rahaq_0945 NC_015061.1 1011098 1011712 D KEGG: yen:YE3233 methylthioribulose-1-phosphate dehydratase; TIGRFAM: methylthioribulose-1-phosphate dehydratase; PFAM: class II aldolase/adducin family protein; methylthioribulose-1-phosphate dehydratase 1011098..1011712 Rahnella sp. Y9602 10211937 YP_004211698.1 CDS Rahaq_0946 NC_015061.1 1011709 1012395 D TIGRFAM: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; KEGG: spe:Spro_0943 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 1011709..1012395 Rahnella sp. Y9602 10211938 YP_004211699.1 CDS Rahaq_0947 NC_015061.1 1012407 1012952 D KEGG: spe:Spro_0944 acireductone dioxygenase ARD; PFAM: Acireductone dioxygenase ARD; acireductone dioxygenase 1012407..1012952 Rahnella sp. Y9602 10211939 YP_004211700.1 CDS Rahaq_0948 NC_015061.1 1013029 1014057 R TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; KEGG: dda:Dd703_0921 translation initiation factor, aIF-2BI family; PFAM: initiation factor 2B related; translation initiation factor, aIF-2BI family complement(1013029..1014057) Rahnella sp. Y9602 10211940 YP_004211701.1 CDS Rahaq_0949 NC_015061.1 1014175 1015374 D TIGRFAM: 5-methylthioribose kinase; KEGG: yen:YE3228 methylthioribose kinase; PFAM: aminoglycoside phosphotransferase; 5-methylthioribose kinase 1014175..1015374 Rahnella sp. Y9602 10211941 YP_004211702.1 CDS Rahaq_0950 NC_015061.1 1015470 1015940 D PFAM: protein of unknown function DUF1456; KEGG: pfl:PFL_1244 hypothetical protein; hypothetical protein 1015470..1015940 Rahnella sp. Y9602 10211942 YP_004211703.1 CDS Rahaq_0951 NC_015061.1 1016233 1017630 D KEGG: sea:SeAg_B2933 glycoporin; glycoporin 1016233..1017630 Rahnella sp. Y9602 10211943 YP_004211704.1 CDS Rahaq_0952 NC_015061.1 1017799 1020267 R PFAM: protein of unknown function DUF1974; acyl-CoA dehydrogenase domain-containing protein; KEGG: spe:Spro_0949 acyl-CoA dehydrogenase; hypothetical protein complement(1017799..1020267) Rahnella sp. Y9602 10211944 YP_004211705.1 CDS Rahaq_0953 NC_015061.1 1020537 1021118 D KEGG: spe:Spro_0950 phosphoheptose isomerase; TIGRFAM: phosphoheptose isomerase; PFAM: sugar isomerase (SIS); phosphoheptose isomerase 1020537..1021118 Rahnella sp. Y9602 10211945 YP_004211706.1 CDS Rahaq_0954 NC_015061.1 1021145 1021912 D PFAM: glutamine amidotransferase class-II; KEGG: spe:Spro_0951 glutamine amidotransferase class-II; glutamine amidotransferase 1021145..1021912 Rahnella sp. Y9602 10211946 YP_004211707.1 CDS Rahaq_0955 NC_015061.1 1021883 1022608 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: yen:YE3221 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein complement(1021883..1022608) Rahnella sp. Y9602 10211947 YP_004211708.1 CDS Rahaq_0956 NC_015061.1 1022892 1023950 D KEGG: spe:Spro_0962 DNA polymerase IV; PFAM: UMUC domain protein DNA-repair protein; DNA-directed DNA polymerase 1022892..1023950 Rahnella sp. Y9602 10211948 YP_004211709.1 CDS Rahaq_0957 NC_015061.1 1024085 1025545 R TIGRFAM: aminoacyl-histidine dipeptidase; KEGG: yen:YE3206 aminoacyl-histidine dipeptidase; PFAM: peptidase dimerisation domain protein; peptidase M20; aminoacyl-histidine dipeptidase complement(1024085..1025545) Rahnella sp. Y9602 10211949 YP_004211710.1 CDS Rahaq_0958 NC_015061.1 1025839 1026297 D KEGG: eta:ETA_25980 xanthine-guanine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; xanthine phosphoribosyltransferase 1025839..1026297 Rahnella sp. Y9602 10211950 YP_004211711.1 CDS Rahaq_0959 NC_015061.1 1026484 1027734 D KEGG: yen:YE3204 fermentation/respiration switch protein; fermentation/respiration switch protein 1026484..1027734 Rahnella sp. Y9602 10211951 YP_004211712.1 CDS Rahaq_0960 NC_015061.1 1027798 1028199 D PFAM: transcriptional regulator Crl; KEGG: yen:YE3203 DNA-binding transcriptional regulator Crl; Crl family transcriptional regulator 1027798..1028199 Rahnella sp. Y9602 10211952 YP_004211713.1 CDS Rahaq_0961 NC_015061.1 1028322 1029425 D TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; KEGG: ypb:YPTS_0946 gamma-glutamyl kinase; SMART: PUA domain containing protein; glutamate 5-kinase 1028322..1029425 Rahnella sp. Y9602 10211953 YP_004211714.1 CDS Rahaq_0962 NC_015061.1 1029436 1030689 D TIGRFAM: gamma-glutamyl phosphate reductase; KEGG: yen:YE3201 gamma-glutamyl phosphate reductase; PFAM: Aldehyde Dehydrogenase; gamma-glutamyl phosphate reductase 1029436..1030689 Rahnella sp. Y9602 10211954 YP_004211715.1 CDS Rahaq_0963 NC_015061.1 1030755 1031648 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pol:Bpro_3431 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1030755..1031648) Rahnella sp. Y9602 10211955 YP_004211716.1 CDS Rahaq_0964 NC_015061.1 1031778 1032656 D KEGG: rlt:Rleg2_1027 beta-lactamase domain protein; beta-lactamase 1031778..1032656 Rahnella sp. Y9602 10211956 YP_004211717.1 CDS Rahaq_0965 NC_015061.1 1032670 1033647 D PFAM: alpha/beta hydrolase fold; KEGG: rlt:Rleg2_1028 alpha/beta hydrolase fold; alpha/beta hydrolase 1032670..1033647 Rahnella sp. Y9602 10211957 YP_004211718.1 CDS Rahaq_0966 NC_015061.1 1034348 1034611 D PFAM: Colicin D; KEGG: ypy:YPK_2802 colicin D; Colicin D 1034348..1034611 Rahnella sp. Y9602 10211960 YP_004211719.1 CDS Rahaq_0967 NC_015061.1 1034649 1034903 D PFAM: Colicin immunity protein/pyocin immunity protein; KEGG: eoi:ECO111_p4-05 colicin immunity protein; Colicin immunity protein/pyocin immunity protein 1034649..1034903 Rahnella sp. Y9602 10211961 YP_004211720.1 CDS Rahaq_0968 NC_015061.1 1034947 1035225 R KEGG: ctu:Ctu_00330 hypothetical protein; hypothetical protein complement(1034947..1035225) Rahnella sp. Y9602 10211962 YP_004211721.1 CDS Rahaq_0969 NC_015061.1 1035583 1036068 D KEGG: ypi:YpsIP31758_B0080 hypothetical protein; hypothetical protein 1035583..1036068 Rahnella sp. Y9602 10211963 YP_004211722.1 CDS Rahaq_0970 NC_015061.1 1036072 1037601 D PFAM: Colicin E3 catalytic; S-type Pyocin domain protein; KEGG: enc:ECL_02217 hypothetical protein; Colicin E3 catalytic 1036072..1037601 Rahnella sp. Y9602 10211964 YP_004211723.1 CDS Rahaq_0971 NC_015061.1 1037601 1037858 D KEGG: ddi:DDB_G0289121 cAMP-specific phosphodiesterase; hypothetical protein 1037601..1037858 Rahnella sp. Y9602 10211965 YP_004211724.1 CDS Rahaq_0972 NC_015061.1 1037851 1038045 D KEGG: ypb:YPTS_3238 hypothetical protein; hypothetical protein 1037851..1038045 Rahnella sp. Y9602 10211966 YP_004211725.1 CDS Rahaq_0974 NC_015061.1 1038399 1038725 R PFAM: NIPSNAP family containing protein; KEGG: eci:UTI89_C0287 hypothetical protein; NIPSNAP family containing protein complement(1038399..1038725) Rahnella sp. Y9602 10211968 YP_004211726.1 CDS Rahaq_0975 NC_015061.1 1039046 1039939 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_24020 transcriptional regulator; LysR family transcriptional regulator 1039046..1039939 Rahnella sp. Y9602 10211969 YP_004211727.1 CDS Rahaq_0976 NC_015061.1 1039974 1040963 R PFAM: aldo/keto reductase; KEGG: ecz:ECS88_0298 aldo-keto reductase; aldo/keto reductase complement(1039974..1040963) Rahnella sp. Y9602 10211970 YP_004211728.1 CDS Rahaq_0977 NC_015061.1 1040990 1041841 R PFAM: aldo/keto reductase; KEGG: efe:EFER_2672 aldo-keto reductase; aldo/keto reductase complement(1040990..1041841) Rahnella sp. Y9602 10211971 YP_004211729.1 CDS Rahaq_0978 NC_015061.1 1042048 1042317 R KEGG: pam:PANA_1081 hypothetical protein; hypothetical protein complement(1042048..1042317) Rahnella sp. Y9602 10211972 YP_004211730.1 CDS Rahaq_0979 NC_015061.1 1042871 1043128 D PFAM: protein of unknown function DUF1471; KEGG: spe:Spro_1393 hypothetical protein; hypothetical protein 1042871..1043128 Rahnella sp. Y9602 10211973 YP_004211731.1 CDS Rahaq_0980 NC_015061.1 1043191 1043418 R KEGG: xac:XAC4351 hypothetical protein; hypothetical protein complement(1043191..1043418) Rahnella sp. Y9602 10211974 YP_004211732.1 CDS Rahaq_0981 NC_015061.1 1043684 1043917 D KEGG: ent:Ent638_1660 hypothetical protein; manually curated; PFAM: protein of unknown function DUF333; hypothetical protein 1043684..1043917 Rahnella sp. Y9602 10211975 YP_004211733.1 CDS Rahaq_0982 NC_015061.1 1044274 1045431 D TIGRFAM: amidohydrolase; KEGG: ddc:Dd586_2912 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 1044274..1045431 Rahnella sp. Y9602 10211976 YP_004211734.1 CDS Rahaq_0983 NC_015061.1 1045496 1046278 R KEGG: dze:Dd1591_1334 acetyltransferase; acetyltransferase complement(1045496..1046278) Rahnella sp. Y9602 10211977 YP_004211735.1 CDS Rahaq_0984 NC_015061.1 1046460 1048247 R KEGG: yen:YE1405 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer with Cache sensor complement(1046460..1048247) Rahnella sp. Y9602 10211978 YP_004211736.1 CDS Rahaq_0985 NC_015061.1 1048576 1049556 D PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: ebi:EbC_21600 xylose isomerase; xylose isomerase domain-containing protein TIM barrel 1048576..1049556 Rahnella sp. Y9602 10211979 YP_004211737.1 CDS Rahaq_0986 NC_015061.1 1049618 1050661 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: tau:Tola_1943 periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator 1049618..1050661 Rahnella sp. Y9602 10211980 YP_004211738.1 CDS Rahaq_0987 NC_015061.1 1050694 1052187 D KEGG: tau:Tola_1942 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1050694..1052187 Rahnella sp. Y9602 10211981 YP_004211739.1 CDS Rahaq_0988 NC_015061.1 1052239 1053210 D PFAM: inner-membrane translocator; KEGG: pam:PANA_1875 RbsC; inner-membrane translocator 1052239..1053210 Rahnella sp. Y9602 10211982 YP_004211740.1 CDS Rahaq_0989 NC_015061.1 1053210 1054067 D PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: ebi:EbC_21640 HTH-type transcriptional regulator RpiR; RpiR family transcriptional regulator 1053210..1054067 Rahnella sp. Y9602 10211983 YP_004211741.1 CDS Rahaq_0990 NC_015061.1 1054069 1054929 D PFAM: PfkB domain protein; KEGG: tau:Tola_1939 PfkB domain protein; PfkB domain-containing protein 1054069..1054929 Rahnella sp. Y9602 10211984 YP_004211742.1 CDS Rahaq_0991 NC_015061.1 1055004 1055309 R TIGRFAM: conserved hypothetical protein; KEGG: kpu:KP1_4355 hypothetical protein; hypothetical protein complement(1055004..1055309) Rahnella sp. Y9602 10211985 YP_004211743.1 CDS Rahaq_0992 NC_015061.1 1055530 1056627 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: eay:EAM_2132 NADH:flavin oxidoreductase; NADH:flavin oxidoreductase 1055530..1056627 Rahnella sp. Y9602 10211986 YP_004211744.1 CDS Rahaq_0993 NC_015061.1 1056800 1060258 D KEGG: ddc:Dd586_2006 exodeoxyribonuclease V, subunit gamma; TIGRFAM: exodeoxyribonuclease V, subunit gamma; exodeoxyribonuclease V subunit gamma 1056800..1060258 Rahnella sp. Y9602 10211987 YP_004211745.1 CDS Rahaq_0994 NC_015061.1 1060255 1063938 D KEGG: ddd:Dda3937_02948 exonuclease V (RecBCD complex), subunit beta; TIGRFAM: exodeoxyribonuclease V, subunit beta; PFAM: UvrD/REP helicase; exodeoxyribonuclease V subunit beta 1060255..1063938 Rahnella sp. Y9602 10211988 YP_004211746.1 CDS Rahaq_0995 NC_015061.1 1063935 1065989 D KEGG: ddc:Dd586_2008 exodeoxyribonuclease V, subunit alpha; TIGRFAM: exodeoxyribonuclease V, subunit alpha; exodeoxyribonuclease V subunit alpha 1063935..1065989 Rahnella sp. Y9602 10211989 YP_004211747.1 CDS Rahaq_0996 NC_015061.1 1066010 1066201 R KEGG: pam:PANA_0927 hypothetical protein; hypothetical protein complement(1066010..1066201) Rahnella sp. Y9602 10211990 YP_004211748.1 CDS Rahaq_0997 NC_015061.1 1066376 1066483 R KEGG: sbc:SbBS512_E1966 hypothetical protein; hypothetical protein complement(1066376..1066483) Rahnella sp. Y9602 10211991 YP_004211749.1 CDS Rahaq_0998 NC_015061.1 1066477 1066665 R KEGG: ypb:YPTS_3753 regulatory protein CsrD; hypothetical protein complement(1066477..1066665) Rahnella sp. Y9602 10211992 YP_004211750.1 CDS Rahaq_0999 NC_015061.1 1066753 1067997 R PFAM: major facilitator superfamily MFS_1; KEGG: avn:Avin_17740 MFS transporter; major facilitator superfamily protein complement(1066753..1067997) Rahnella sp. Y9602 10211993 YP_004211751.1 CDS Rahaq_1000 NC_015061.1 1067994 1069145 R PFAM: beta-lactamase; KEGG: bcm:Bcenmc03_4045 beta-lactamase; beta-lactamase complement(1067994..1069145) Rahnella sp. Y9602 10211994 YP_004211752.1 CDS Rahaq_1001 NC_015061.1 1069260 1070168 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pct:PC1_3565 transcriptional regulator, LysR family; LysR family transcriptional regulator 1069260..1070168 Rahnella sp. Y9602 10211995 YP_004211753.1 CDS Rahaq_1002 NC_015061.1 1070196 1070687 D PFAM: GCN5-related N-acetyltransferase; KEGG: rhi:NGR_c05090 acetyltransferase; N-acetyltransferase GCN5 1070196..1070687 Rahnella sp. Y9602 10211996 YP_004211754.1 CDS Rahaq_1003 NC_015061.1 1070802 1071281 D KEGG: dda:Dd703_3814 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 1070802..1071281 Rahnella sp. Y9602 10211997 YP_004211755.1 CDS Rahaq_1004 NC_015061.1 1071415 1072977 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: eca:ECA3374 signaling membrane protein; SMART: GGDEF domain containing protein; diguanylate cyclase 1071415..1072977 Rahnella sp. Y9602 10211998 YP_004211756.1 CDS Rahaq_1006 NC_015061.1 1073409 1074137 R KEGG: ebi:EbC_45200 conserved uncharacterized protein YiaF; hypothetical protein complement(1073409..1074137) Rahnella sp. Y9602 10212000 YP_004211757.1 CDS Rahaq_1007 NC_015061.1 1074266 1075372 D PFAM: protein of unknown function DUF1615; KEGG: spe:Spro_0988 hypothetical protein; hypothetical protein 1074266..1075372 Rahnella sp. Y9602 10212001 YP_004211758.1 CDS Rahaq_1008 NC_015061.1 1075725 1075937 D KEGG: spe:Spro_2061 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock protein 1075725..1075937 Rahnella sp. Y9602 10212002 YP_004211759.1 CDS Rahaq_1009 NC_015061.1 1076573 1076710 R hypothetical protein complement(1076573..1076710) Rahnella sp. Y9602 10212003 YP_004211760.1 CDS Rahaq_1010 NC_015061.1 1076802 1076912 R hypothetical protein complement(1076802..1076912) Rahnella sp. Y9602 10212004 YP_004211761.1 CDS Rahaq_1011 NC_015061.1 1077388 1078725 D PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA0937 transport protein; major facilitator superfamily protein 1077388..1078725 Rahnella sp. Y9602 10212005 YP_004211762.1 CDS Rahaq_1012 NC_015061.1 1078718 1080064 D KEGG: tau:Tola_2583 glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein; glucarate dehydratase 1078718..1080064 Rahnella sp. Y9602 10212006 YP_004211763.1 CDS Rahaq_1013 NC_015061.1 1080102 1080305 R KEGG: fgr:FG02859.1 hypothetical protein; hypothetical protein complement(1080102..1080305) Rahnella sp. Y9602 10212007 YP_004211764.1 CDS Rahaq_1014 NC_015061.1 1080441 1081691 R KEGG: ebi:EbC_32370 resistance protein; TIGRFAM: Oxalate/Formate Antiporter; PFAM: major facilitator superfamily MFS_1; Oxalate/Formate Antiporter complement(1080441..1081691) Rahnella sp. Y9602 10212008 YP_004211765.1 CDS Rahaq_1015 NC_015061.1 1082068 1082844 R PFAM: alpha/beta hydrolase fold; KEGG: cvi:CV_2920 hydrolase; alpha/beta hydrolase complement(1082068..1082844) Rahnella sp. Y9602 10212009 YP_004211766.1 CDS Rahaq_1016 NC_015061.1 1083071 1083436 D KEGG: ebi:EbC_11880 hypothetical protein; hypothetical protein 1083071..1083436 Rahnella sp. Y9602 10212010 YP_004211767.1 CDS Rahaq_1017 NC_015061.1 1083644 1085590 D TIGRFAM: penicillin-binding protein 2; KEGG: kpe:KPK_2538 penicillin-binding protein; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; penicillin-binding protein 2 1083644..1085590 Rahnella sp. Y9602 10212011 YP_004211768.1 CDS Rahaq_1018 NC_015061.1 1085604 1086371 R KEGG: hde:HDEF_1936 RTX-family protein-22; hypothetical protein complement(1085604..1086371) Rahnella sp. Y9602 10212012 YP_004211769.1 CDS Rahaq_1019 NC_015061.1 1086465 1087187 R KEGG: hde:HDEF_1711 RTX-family protein-21; hypothetical protein complement(1086465..1087187) Rahnella sp. Y9602 10212013 YP_004211770.1 CDS Rahaq_1020 NC_015061.1 1087927 1089390 D KEGG: yen:YE1035 two-component system sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 1087927..1089390 Rahnella sp. Y9602 10212014 YP_004211771.1 CDS Rahaq_1021 NC_015061.1 1089390 1090145 D KEGG: spe:Spro_3652 hypothetical protein; hypothetical protein 1089390..1090145 Rahnella sp. Y9602 10212015 YP_004211772.1 CDS Rahaq_1022 NC_015061.1 1090142 1091479 D KEGG: spe:Spro_3651 two component, sigma54 specific, fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; SMART: response regulator receiver; AAA ATPase; two component, sigma-54 specific, transcriptional regulator 1090142..1091479 Rahnella sp. Y9602 10212016 YP_004211773.1 CDS Rahaq_1023 NC_015061.1 1091634 1091972 D PFAM: nitrogen regulatory protein P-II; KEGG: spe:Spro_3649 nitrogen regulatory protein P-II 1; nitrogen regulatory protein P-II 1091634..1091972 Rahnella sp. Y9602 10212017 YP_004211774.1 CDS Rahaq_1024 NC_015061.1 1092392 1092913 D KEGG: har:HEAR2556 hypothetical protein; hypothetical protein 1092392..1092913 Rahnella sp. Y9602 10212018 YP_004211775.1 CDS Rahaq_1025 NC_015061.1 1092940 1094541 D PFAM: FAD dependent oxidoreductase; KEGG: har:HEAR2557 glucose dehydrogenase; FAD dependent oxidoreductase 1092940..1094541 Rahnella sp. Y9602 10212019 YP_004211776.1 CDS Rahaq_1026 NC_015061.1 1094552 1095955 D KEGG: har:HEAR2558 alcohol dehydrogenase cytochrome c subunit precursor; gluconate 2-dehydrogenase (acceptor) 1094552..1095955 Rahnella sp. Y9602 10212020 YP_004211777.1 CDS Rahaq_1027 NC_015061.1 1096020 1097210 R PFAM: globin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: pwa:Pecwa_1230 nitric oxide dioxygenase; globin complement(1096020..1097210) Rahnella sp. Y9602 10212021 YP_004211778.1 CDS Rahaq_1028 NC_015061.1 1097432 1098796 D KEGG: spe:Spro_3638 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase; glycine hydroxymethyltransferase 1097432..1098796 Rahnella sp. Y9602 10212022 YP_004211779.1 CDS Rahaq_1029 NC_015061.1 1098960 1100120 D PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE1049 3-phenylpropionic acid transporter; major facilitator superfamily protein 1098960..1100120 Rahnella sp. Y9602 10212023 YP_004211780.1 CDS Rahaq_1030 NC_015061.1 1100117 1101397 R PFAM: PRD domain protein; KEGG: spe:Spro_3633 stationary phase inducible protein CsiE; transcriptional antiterminator BglG complement(1100117..1101397) Rahnella sp. Y9602 10212024 YP_004211781.1 CDS Rahaq_1031 NC_015061.1 1101531 1102250 D PFAM: protein of unknown function DUF1007; KEGG: spe:Spro_3632 hypothetical protein; hypothetical protein 1101531..1102250 Rahnella sp. Y9602 10212025 YP_004211782.1 CDS Rahaq_1032 NC_015061.1 1102241 1103260 D PFAM: high-affinity nickel-transporter; KEGG: spe:Spro_3631 high-affinity nickel-transporter; high-affinity nickel-transporter 1102241..1103260 Rahnella sp. Y9602 10212026 YP_004211783.1 CDS Rahaq_1033 NC_015061.1 1103341 1104144 R PFAM: inositol monophosphatase; KEGG: spe:Spro_3630 inositol monophosphatase; inositol monophosphatase complement(1103341..1104144) Rahnella sp. Y9602 10212027 YP_004211784.1 CDS Rahaq_1034 NC_015061.1 1104272 1105009 D KEGG: yen:YE1055 SpoU family rRNA methylase; TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA methyltransferase, TrmH family, group 1 1104272..1105009 Rahnella sp. Y9602 10212028 YP_004211785.1 CDS Rahaq_1035 NC_015061.1 1105225 1105719 D KEGG: spe:Spro_3628 DNA-binding transcriptional regulator IscR; TIGRFAM: iron-sulfur cluster assembly transcription factor IscR; transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; BadM/Rrf2 family transcriptional regulator 1105225..1105719 Rahnella sp. Y9602 10212029 YP_004211786.1 CDS Rahaq_1036 NC_015061.1 1105994 1107163 D TIGRFAM: cysteine desulfurase IscS; KEGG: eca:ECA3237 cysteine desulfurase; PFAM: aminotransferase class V; cysteine desulfurase IscS 1105994..1107163 Rahnella sp. Y9602 10212030 YP_004211787.1 CDS Rahaq_1037 NC_015061.1 1107245 1108555 D PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: spe:Spro_3620 aminopeptidase B; peptidase M17 leucyl aminopeptidase domain-containing protein 1107245..1108555 Rahnella sp. Y9602 10212031 YP_004211788.1 CDS Rahaq_1038 NC_015061.1 1108638 1109501 D KEGG: spe:Spro_3619 enhanced serine sensitivity protein SseB; enhanced serine sensitivity protein SseB 1108638..1109501 Rahnella sp. Y9602 10212032 YP_004211789.1 CDS Rahaq_1039 NC_015061.1 1109724 1110149 D PFAM: nucleoside diphosphate kinase; KEGG: spe:Spro_3613 nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase; nucleoside-diphosphate kinase 1109724..1110149 Rahnella sp. Y9602 10212033 YP_004211790.1 CDS Rahaq_1040 NC_015061.1 1110375 1111574 D KEGG: spe:Spro_3612 ribosomal RNA large subunit methyltransferase N; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; radical SAM enzyme, Cfr family 1110375..1111574 Rahnella sp. Y9602 10212034 YP_004211791.1 CDS Rahaq_1041 NC_015061.1 1111651 1112412 D TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: spe:Spro_3611 type IV pilus biogenesis/stability protein PilW; SMART: Tetratricopeptide repeat; type IV pilus biogenesis/stability protein PilW 1111651..1112412 Rahnella sp. Y9602 10212035 YP_004211792.1 CDS Rahaq_1042 NC_015061.1 1112402 1113394 D KEGG: spe:Spro_3610 cytoskeletal protein RodZ; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 1112402..1113394 Rahnella sp. Y9602 10212036 YP_004211793.1 CDS Rahaq_1043 NC_015061.1 1113437 1114558 D KEGG: spe:Spro_3609 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 1113437..1114558 Rahnella sp. Y9602 10212037 YP_004211794.1 CDS Rahaq_1044 NC_015061.1 1114695 1115969 D TIGRFAM: histidyl-tRNA synthetase; KEGG: yen:YE1074 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; histidyl-tRNA synthetase 1114695..1115969 Rahnella sp. Y9602 10212038 YP_004211795.1 CDS Rahaq_1045 NC_015061.1 1115983 1116603 D PFAM: Protein of unknown function DUF2133; KEGG: spe:Spro_3607 hypothetical protein; hypothetical protein 1115983..1116603 Rahnella sp. Y9602 10212039 YP_004211796.1 CDS Rahaq_1046 NC_015061.1 1116615 1117796 D TIGRFAM: outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone repeat-containing protein; KEGG: spe:Spro_3606 outer membrane protein assembly complex subunit YfgL; SMART: Pyrrolo-quinoline quinone beta-propeller repeat; outer membrane assembly lipoprotein YfgL 1116615..1117796 Rahnella sp. Y9602 10212040 YP_004211797.1 CDS Rahaq_1047 NC_015061.1 1118008 1119492 D KEGG: yen:YE1077 GTP-binding protein EngA; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; ribosome-associated GTPase EngA 1118008..1119492 Rahnella sp. Y9602 10212041 YP_004211798.1 CDS Rahaq_1048 NC_015061.1 1119559 1120515 D PFAM: Auxin Efflux Carrier; KEGG: yen:YE1078 hypothetical protein; auxin efflux carrier family protein 1119559..1120515 Rahnella sp. Y9602 10212042 YP_004211799.1 CDS Rahaq_1049 NC_015061.1 1120527 1120757 D PFAM: protein of unknown function DUF1407; KEGG: ypg:YpAngola_A0411 hypothetical protein; hypothetical protein 1120527..1120757 Rahnella sp. Y9602 10212043 YP_004211800.1 CDS Rahaq_1050 NC_015061.1 1120742 1121086 R KEGG: spe:Spro_3602 hypothetical protein; hypothetical protein complement(1120742..1121086) Rahnella sp. Y9602 10212044 YP_004211801.1 CDS Rahaq_1051 NC_015061.1 1121087 1122121 R PFAM: peptidase M4 thermolysin; Peptidase M4 thermolysin; KEGG: enc:ECL_03848 zinc metalloprotease; peptidase M4 thermolysin complement(1121087..1122121) Rahnella sp. Y9602 10212045 YP_004211802.1 CDS Rahaq_1052 NC_015061.1 1122257 1123339 R KEGG: spe:Spro_3600 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator complement(1122257..1123339) Rahnella sp. Y9602 10212046 YP_004211803.1 CDS Rahaq_1053 NC_015061.1 1123554 1124867 D PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3599 major facilitator transporter; major facilitator superfamily protein 1123554..1124867 Rahnella sp. Y9602 10212047 YP_004211804.1 CDS Rahaq_1054 NC_015061.1 1124864 1127227 D PFAM: glycoside hydrolase family 31; KEGG: spe:Spro_3598 alpha-glucosidase; glycoside hydrolase 1124864..1127227 Rahnella sp. Y9602 10212048 YP_004211805.1 CDS Rahaq_1055 NC_015061.1 1127281 1128654 R KEGG: spe:Spro_3597 exodeoxyribonuclease VII large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type; exodeoxyribonuclease VII large subunit complement(1127281..1128654) Rahnella sp. Y9602 10212049 YP_004211806.1 CDS Rahaq_1056 NC_015061.1 1128655 1130289 D SMART: CBS domain containing protein; TIGRFAM: inosine-5'-monophosphate dehydrogenase; KEGG: yps:YPTB2833 inosine 5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; inosine-5'-monophosphate dehydrogenase 1128655..1130289 Rahnella sp. Y9602 10212050 YP_004211807.1 CDS Rahaq_1057 NC_015061.1 1130394 1131971 D KEGG: spe:Spro_3595 GMP synthase; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; GMP synthase 1130394..1131971 Rahnella sp. Y9602 10212051 YP_004211808.1 CDS Rahaq_1058 NC_015061.1 1132225 1133559 D TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; GAF domain protein; PAS fold-3 domain protein; KEGG: mms:mma_1577 sensory box protein; SMART: GGDEF domain containing protein; PAS domain containing protein; GAF domain protein; PAS/PAC and GAF sensor-containing diguanylate cyclase 1132225..1133559 Rahnella sp. Y9602 10212052 YP_004211809.1 CDS Rahaq_1059 NC_015061.1 1133678 1134451 R KEGG: rpf:Rpic12D_4017 ribosyldihydronicotinamide dehydrogenase (quinone); PFAM: NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase (quinone) complement(1133678..1134451) Rahnella sp. Y9602 10212053 YP_004211810.1 CDS Rahaq_1060 NC_015061.1 1134537 1135430 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2459 LysR family transcriptional regulator; LysR family transcriptional regulator 1134537..1135430 Rahnella sp. Y9602 10212054 YP_004211811.1 CDS Rahaq_1061 NC_015061.1 1135482 1136141 R KEGG: ebd:ECBD_2209 uncharacterized lipoprotein YdcL; lipoprotein YdcL complement(1135482..1136141) Rahnella sp. Y9602 10212055 YP_004211812.1 CDS Rahaq_1062 NC_015061.1 1136281 1136715 R PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_3579 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(1136281..1136715) Rahnella sp. Y9602 10212056 YP_004211813.1 CDS Rahaq_1063 NC_015061.1 1137002 1137811 D KEGG: eca:ECA3197 hydroxyethylthiazole kinase; PFAM: hydroxyethylthiazole kinase; hydroxyethylthiazole kinase 1137002..1137811 Rahnella sp. Y9602 10212057 YP_004211814.1 CDS Rahaq_1064 NC_015061.1 1137808 1138608 D TIGRFAM: phosphomethylpyrimidine kinase; KEGG: spe:Spro_3577 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase 1137808..1138608 Rahnella sp. Y9602 10212058 YP_004211815.1 CDS Rahaq_1065 NC_015061.1 1138616 1139464 R KEGG: ypy:YPK_1322 hypothetical protein; hypothetical protein complement(1138616..1139464) Rahnella sp. Y9602 10212059 YP_004211816.1 CDS Rahaq_1066 NC_015061.1 1139587 1140273 R KEGG: spe:Spro_3567 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(1139587..1140273) Rahnella sp. Y9602 10212060 YP_004211817.1 CDS Rahaq_1067 NC_015061.1 1140364 1141200 R KEGG: enc:ECL_00183 transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(1140364..1141200) Rahnella sp. Y9602 10212061 YP_004211818.1 CDS Rahaq_1068 NC_015061.1 1141473 1142882 D TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: cro:ROD_42321 hypothetical protein; sugar (Glycoside-Pentoside-Hexuronide) transporter 1141473..1142882 Rahnella sp. Y9602 10212062 YP_004211819.1 CDS Rahaq_1069 NC_015061.1 1142906 1144879 D PFAM: protein of unknown function DUF1680; KEGG: sed:SeD_A4064 hypothetical protein; hypothetical protein 1142906..1144879 Rahnella sp. Y9602 10212063 YP_004211820.1 CDS Rahaq_1070 NC_015061.1 1144885 1145439 R TIGRFAM: chorismate mutase; KEGG: sew:SeSA_A1358 chorismate mutase; PFAM: Chorismate mutase, type II; chorismate mutase complement(1144885..1145439) Rahnella sp. Y9602 10212064 YP_004211821.1 CDS Rahaq_1071 NC_015061.1 1145717 1147006 R PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3565 major facilitator transporter; major facilitator superfamily protein complement(1145717..1147006) Rahnella sp. Y9602 10212065 YP_004211822.1 CDS Rahaq_1072 NC_015061.1 1147130 1148143 R PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: spe:Spro_3564 alcohol dehydrogenase; molecular chaperone GroES complement(1147130..1148143) Rahnella sp. Y9602 10212066 YP_004211823.1 CDS Rahaq_1073 NC_015061.1 1148155 1149369 R PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: spe:Spro_3563 mandelate racemase/muconate lactonizing protein; mandelate racemase/muconate lactonizing protein complement(1148155..1149369) Rahnella sp. Y9602 10212067 YP_004211824.1 CDS Rahaq_1074 NC_015061.1 1149561 1150574 R PFAM: Malate/L-lactate dehydrogenase; KEGG: apr:Apre_0576 malate/L-lactate dehydrogenase; malate/L-lactate dehydrogenase complement(1149561..1150574) Rahnella sp. Y9602 10212068 YP_004211825.1 CDS Rahaq_1075 NC_015061.1 1150561 1152123 R PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_0691 oligogalacturonide transporter; major facilitator superfamily protein complement(1150561..1152123) Rahnella sp. Y9602 10212069 YP_004211826.1 CDS Rahaq_1076 NC_015061.1 1152369 1153256 R KEGG: spe:Spro_3562 lipid kinase; PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; diacylglycerol kinase catalytic subunit complement(1152369..1153256) Rahnella sp. Y9602 10212070 YP_004211827.1 CDS Rahaq_1077 NC_015061.1 1153626 1155011 R PFAM: peptidase U32; KEGG: yen:YE1100 protease; peptidase U32 complement(1153626..1155011) Rahnella sp. Y9602 10212071 YP_004211828.1 CDS Rahaq_1078 NC_015061.1 1155198 1155545 R PFAM: protein of unknown function DUF1508; KEGG: spe:Spro_3560 hypothetical protein; hypothetical protein complement(1155198..1155545) Rahnella sp. Y9602 10212072 YP_004211829.1 CDS Rahaq_1079 NC_015061.1 1155700 1156419 R KEGG: spe:Spro_3557 DNA-binding transcriptional regulator BaeR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator complement(1155700..1156419) Rahnella sp. Y9602 10212073 YP_004211830.1 CDS Rahaq_1080 NC_015061.1 1156420 1157805 R KEGG: spe:Spro_3556 signal transduction histidine-protein kinase BaeS; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase complement(1156420..1157805) Rahnella sp. Y9602 10212074 YP_004211831.1 CDS Rahaq_1081 NC_015061.1 1157802 1159277 R PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3555 multidrug efflux system protein MdtE; major facilitator superfamily protein complement(1157802..1159277) Rahnella sp. Y9602 10212075 YP_004211832.1 CDS Rahaq_1082 NC_015061.1 1159537 1160490 D PFAM: aldo/keto reductase; KEGG: spe:Spro_3551 aldo/keto reductase; aldo/keto reductase 1159537..1160490 Rahnella sp. Y9602 10212076 YP_004211833.1 CDS Rahaq_1083 NC_015061.1 1160559 1161911 R KEGG: spe:Spro_3548 chaperone; chaperone complement(1160559..1161911) Rahnella sp. Y9602 10212077 YP_004211834.1 CDS Rahaq_1084 NC_015061.1 1162053 1164047 R KEGG: spe:Spro_3954 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain-containing protein; Transketolase central region; transketolase complement(1162053..1164047) Rahnella sp. Y9602 10212078 YP_004211835.1 CDS Rahaq_1085 NC_015061.1 1164104 1165054 R KEGG: spe:Spro_3479 transaldolase A; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase complement(1164104..1165054) Rahnella sp. Y9602 10212079 YP_004211836.1 CDS Rahaq_1086 NC_015061.1 1165424 1167703 D PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; KEGG: spe:Spro_3472 malic enzyme; malic protein NAD-binding protein 1165424..1167703 Rahnella sp. Y9602 10212080 YP_004211837.1 CDS Rahaq_1087 NC_015061.1 1167763 1168710 R KEGG: spe:Spro_4396 purine nucleosidase; PFAM: Inosine/uridine-preferring nucleoside hydrolase; ribosylpyrimidine nucleosidase complement(1167763..1168710) Rahnella sp. Y9602 10212081 YP_004211838.1 CDS Rahaq_1088 NC_015061.1 1168765 1169214 R PFAM: protein of unknown function DUF188; KEGG: ypb:YPTS_2857 hypothetical protein; hypothetical protein complement(1168765..1169214) Rahnella sp. Y9602 10212082 YP_004211839.1 CDS Rahaq_1089 NC_015061.1 1169214 1170164 R KEGG: spe:Spro_3464 coproporphyrinogen III oxidase; PFAM: coproporphyrinogen III oxidase; coproporphyrinogen oxidase complement(1169214..1170164) Rahnella sp. Y9602 10212083 YP_004211840.1 CDS Rahaq_1090 NC_015061.1 1170297 1171181 R KEGG: spe:Spro_3463 N-acetylmuramoyl-L-alanine amidase I; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; cell wall hydrolase/autolysin complement(1170297..1171181) Rahnella sp. Y9602 10212084 YP_004211841.1 CDS Rahaq_1091 NC_015061.1 1171458 1171883 D PFAM: GCN5-related N-acetyltransferase; KEGG: ddc:Dd586_0782 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1171458..1171883 Rahnella sp. Y9602 10212085 YP_004211842.1 CDS Rahaq_1092 NC_015061.1 1171947 1172348 R PFAM: protein of unknown function DUF388, OB-fold; KEGG: spe:Spro_3461 hypothetical protein; hypothetical protein complement(1171947..1172348) Rahnella sp. Y9602 10212086 YP_004211843.1 CDS Rahaq_1093 NC_015061.1 1172563 1173006 D KEGG: spe:Spro_3460 hypothetical protein; hypothetical protein 1172563..1173006 Rahnella sp. Y9602 10212087 YP_004211844.1 CDS Rahaq_1094 NC_015061.1 1173157 1173786 D PFAM: protein of unknown function DUF1131; KEGG: spe:Spro_3459 hypothetical protein; hypothetical protein 1173157..1173786 Rahnella sp. Y9602 10212088 YP_004211845.1 CDS Rahaq_1095 NC_015061.1 1173891 1174790 D KEGG: spe:Spro_3458 Dyp-type peroxidase family protein; TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; dyp-type peroxidase family protein 1173891..1174790 Rahnella sp. Y9602 10212089 YP_004211846.1 CDS Rahaq_1096 NC_015061.1 1175003 1176025 D KEGG: spe:Spro_3457 thiosulfate transporter subunit; TIGRFAM: sulfate ABC transporter periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; sulfate ABC transporter substrate-binding protein 1175003..1176025 Rahnella sp. Y9602 10212090 YP_004211847.1 CDS Rahaq_1097 NC_015061.1 1176025 1176855 D KEGG: eta:ETA_10910 sulfate/thiosulfate transporter subunit; TIGRFAM: sulfate ABC transporter inner membrane subunit CysT; sulfate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter permease 1176025..1176855 Rahnella sp. Y9602 10212091 YP_004211848.1 CDS Rahaq_1098 NC_015061.1 1176855 1177730 D KEGG: spe:Spro_3455 sulfate/thiosulfate transporter permease subunit; TIGRFAM: sulfate ABC transporter inner membrane subunit; sulfate ABC transporter inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter permease 1176855..1177730 Rahnella sp. Y9602 10212092 YP_004211849.1 CDS Rahaq_1099 NC_015061.1 1177720 1178814 D TIGRFAM: sulfate ABC transporter ATPase subunit; PFAM: ABC transporter related; KEGG: yen:YE1197 sulfate/thiosulfate transporter subunit; SMART: AAA ATPase; sulfate ABC transporter ATPase 1177720..1178814 Rahnella sp. Y9602 10212093 YP_004211850.1 CDS Rahaq_1100 NC_015061.1 1178930 1179814 D KEGG: eta:ETA_10940 cysteine synthase B (O-acetylserine sulfhydrolase B); TIGRFAM: cysteine synthase B; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein subunit beta; cysteine synthase B 1178930..1179814 Rahnella sp. Y9602 10212094 YP_004211851.1 CDS Rahaq_1101 NC_015061.1 1179917 1180600 D KEGG: spe:Spro_3452 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator 1179917..1180600 Rahnella sp. Y9602 10212095 YP_004211852.1 CDS Rahaq_1102 NC_015061.1 1180581 1181930 D manually curated; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: spe:Spro_3451 integral membrane sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase 1180581..1181930 Rahnella sp. Y9602 10212096 YP_004211853.1 CDS Rahaq_1103 NC_015061.1 1181986 1182495 R KEGG: yen:YE1205 PTS system glucose-specific transporter subunit; TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; PTS system glucose subfamily transporter subunit IIA complement(1181986..1182495) Rahnella sp. Y9602 10212097 YP_004211854.1 CDS Rahaq_1104 NC_015061.1 1182544 1184271 R KEGG: spe:Spro_3449 phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; phosphoenolpyruvate-protein phosphotransferase complement(1182544..1184271) Rahnella sp. Y9602 10212098 YP_004211855.1 CDS Rahaq_1105 NC_015061.1 1184322 1184579 R KEGG: spe:Spro_3448 PTS system phosphohistidinoprotein-hexose phosphotransferase subunit HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; phosphotransferase system, phosphocarrier protein HPr complement(1184322..1184579) Rahnella sp. Y9602 10212099 YP_004211856.1 CDS Rahaq_1106 NC_015061.1 1184983 1185948 R KEGG: spe:Spro_3447 cysteine synthase A; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein subunit beta; cysteine synthase A complement(1184983..1185948) Rahnella sp. Y9602 10212100 YP_004211857.1 CDS Rahaq_1107 NC_015061.1 1186159 1186959 R KEGG: spe:Spro_3446 sulfate transport protein CysZ; sulfate transport protein CysZ complement(1186159..1186959) Rahnella sp. Y9602 10212101 YP_004211858.1 CDS Rahaq_1108 NC_015061.1 1186990 1187139 D hypothetical protein 1186990..1187139 Rahnella sp. Y9602 10212102 YP_004211859.1 CDS Rahaq_1109 NC_015061.1 1187183 1188181 D TIGRFAM: cell division protein ZipA; PFAM: ZipA FtsZ-binding region protein; KEGG: spe:Spro_3445 cell division protein ZipA; SMART: ZipA FtsZ-binding region protein; cell division protein ZipA 1187183..1188181 Rahnella sp. Y9602 10212103 YP_004211860.1 CDS Rahaq_1110 NC_015061.1 1188253 1190274 D TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; helix-hairpin-helix motif; BRCT domain protein; KEGG: spe:Spro_3444 NAD-dependent DNA ligase LigA; SMART: NAD-dependent DNA ligase ; Helix-hairpin-helix DNA-binding class 1; BRCT domain protein; NAD-dependent DNA ligase 1188253..1190274 Rahnella sp. Y9602 10212104 YP_004211861.1 CDS Rahaq_1111 NC_015061.1 1190278 1190520 D KEGG: pay:PAU_01410 hypothetical protein; hypothetical protein 1190278..1190520 Rahnella sp. Y9602 10212105 YP_004211862.1 CDS Rahaq_1112 NC_015061.1 1190599 1191588 R PFAM: Bile acid:sodium symporter; KEGG: spe:Spro_3442 bile acid:sodium symporter; bile acid:sodium symporter complement(1190599..1191588) Rahnella sp. Y9602 10212106 YP_004211863.1 CDS Rahaq_1113 NC_015061.1 1191687 1192613 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3441 LysR family transcriptional regulator; LysR family transcriptional regulator 1191687..1192613 Rahnella sp. Y9602 10212107 YP_004211864.1 CDS Rahaq_1114 NC_015061.1 1192647 1192988 R KEGG: cko:CKO_00388 hypothetical protein; hypothetical protein complement(1192647..1192988) Rahnella sp. Y9602 10212108 YP_004211865.1 CDS Rahaq_1115 NC_015061.1 1193103 1193663 R PFAM: protein of unknown function DUF925; KEGG: ypb:YPTS_2808 hypothetical protein; hypothetical protein complement(1193103..1193663) Rahnella sp. Y9602 10212109 YP_004211866.1 CDS Rahaq_1116 NC_015061.1 1193941 1195350 D KEGG: kpu:KP1_1165 amino acid/amine transport protein; TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; ethanolamine transporter 1193941..1195350 Rahnella sp. Y9602 10212110 YP_004211867.1 CDS Rahaq_1117 NC_015061.1 1195372 1196754 D KEGG: spe:Spro_3436 ethanolamine ammonia lyase large subunit; PFAM: Ethanolamine ammonia lyase large subunit; ethanolamine ammonia-lyase 1195372..1196754 Rahnella sp. Y9602 10212111 YP_004211868.1 CDS Rahaq_1118 NC_015061.1 1196766 1197575 D KEGG: spe:Spro_3435 ethanolamine ammonia-lyase; PFAM: Ethanolamine ammonia-lyase light chain; ethanolamine ammonia-lyase 1196766..1197575 Rahnella sp. Y9602 10212112 YP_004211869.1 CDS Rahaq_1119 NC_015061.1 1198340 1199758 D KEGG: ddc:Dd586_3119 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; glutamyl-tRNA synthetase 1198340..1199758 Rahnella sp. Y9602 10212117 YP_004211870.1 CDS Rahaq_1120 NC_015061.1 1199846 1200637 R PFAM: formate/nitrite transporter; KEGG: pam:PANA_2752 YrhG; formate/nitrite transporter complement(1199846..1200637) Rahnella sp. Y9602 10212118 YP_004211871.1 CDS Rahaq_1121 NC_015061.1 1201351 1202538 R KEGG: sgl:SG1675 nucleoside transport protein NupC; TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter domain protein; Na+ dependent nucleoside transporter; nucleoside recognition domain protein; nucleoside transporter complement(1201351..1202538) Rahnella sp. Y9602 10212121 YP_004211872.1 CDS Rahaq_1122 NC_015061.1 1202956 1204185 D KEGG: yen:YE1219 manganese transport protein MntH; TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; NRAMP family Mn2+/Fe2+ transporter 1202956..1204185 Rahnella sp. Y9602 10212122 YP_004211873.1 CDS Rahaq_1123 NC_015061.1 1204257 1204670 R PFAM: Protein of unknown function DUF2502; KEGG: pct:PC1_3425 hypothetical protein; hypothetical protein complement(1204257..1204670) Rahnella sp. Y9602 10212123 YP_004211874.1 CDS Rahaq_1124 NC_015061.1 1204830 1205819 R PFAM: aldo/keto reductase; KEGG: spe:Spro_3413 aldo/keto reductase; aldo/keto reductase complement(1204830..1205819) Rahnella sp. Y9602 10212124 YP_004211875.1 CDS Rahaq_1125 NC_015061.1 1206148 1207806 D PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; KEGG: spe:Spro_3412 thiamine pyrophosphate binding domain-containing protein; thiamine pyrophosphate TPP-binding domain-containing protein 1206148..1207806 Rahnella sp. Y9602 10212125 YP_004211876.1 CDS Rahaq_1126 NC_015061.1 1207795 1208682 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: yen:YE1223 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1207795..1208682) Rahnella sp. Y9602 10212126 YP_004211877.1 CDS Rahaq_1127 NC_015061.1 1208815 1209288 D PFAM: transmembrane pair domain-containing protein; KEGG: pwa:Pecwa_1025 transmembrane pair domain protein; transmembrane pair domain-containing protein 1208815..1209288 Rahnella sp. Y9602 10212127 YP_004211878.1 CDS Rahaq_1128 NC_015061.1 1209391 1210089 D KEGG: yen:YE1289 aspartate/glutamate racemase; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; aspartate racemase 1209391..1210089 Rahnella sp. Y9602 10212128 YP_004211879.1 CDS Rahaq_1129 NC_015061.1 1210086 1211348 R PFAM: Cl- channel voltage-gated family protein; KEGG: spe:Spro_3408 hypothetical protein; Cl- channel voltage-gated family protein complement(1210086..1211348) Rahnella sp. Y9602 10212129 YP_004211880.1 CDS Rahaq_1130 NC_015061.1 1211567 1212538 D TIGRFAM: glucokinase; KEGG: efe:EFER_0780 glucokinase; PFAM: glucokinase; glucokinase 1211567..1212538 Rahnella sp. Y9602 10212130 YP_004211881.1 CDS Rahaq_1131 NC_015061.1 1212676 1213446 R KEGG: yen:YE1227 two-component system response-regulator; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; LytTR family two component transcriptional regulator complement(1212676..1213446) Rahnella sp. Y9602 10212131 YP_004211882.1 CDS Rahaq_1132 NC_015061.1 1213511 1215244 R KEGG: yen:YE1228 two-component system histidine kinase; PFAM: histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; signal transduction histidine kinase LytS complement(1213511..1215244) Rahnella sp. Y9602 10212132 YP_004211883.1 CDS Rahaq_1133 NC_015061.1 1215359 1215898 D PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_3402 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1215359..1215898 Rahnella sp. Y9602 10212133 YP_004211884.1 CDS Rahaq_1134 NC_015061.1 1216016 1217275 D PFAM: aminotransferase class I and II; KEGG: spe:Spro_3401 aminotransferase; class I and II aminotransferase 1216016..1217275 Rahnella sp. Y9602 10212134 YP_004211885.1 CDS Rahaq_1135 NC_015061.1 1217356 1218198 R KEGG: pwa:Pecwa_2142 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(1217356..1218198) Rahnella sp. Y9602 10212135 YP_004211886.1 CDS Rahaq_1136 NC_015061.1 1218220 1218846 R PFAM: PEBP family protein; KEGG: tmz:Tmz1t_4061 protein of unknown function DUF524; PEBP family protein complement(1218220..1218846) Rahnella sp. Y9602 10212136 YP_004211887.1 CDS Rahaq_1137 NC_015061.1 1218970 1219149 D KEGG: pde:Pden_4339 response regulator receiver protein; hypothetical protein 1218970..1219149 Rahnella sp. Y9602 10212137 YP_004211888.1 CDS Rahaq_1138 NC_015061.1 1219192 1220997 R KEGG: xca:xccb100_1412 transporter-like membrane protein; transporter-like membrane protein complement(1219192..1220997) Rahnella sp. Y9602 10212138 YP_004211889.1 CDS Rahaq_1139 NC_015061.1 1221186 1221644 D KEGG: avn:Avin_35800 hypothetical protein; hypothetical protein 1221186..1221644 Rahnella sp. Y9602 10212139 YP_004211890.1 CDS Rahaq_1140 NC_015061.1 1221712 1222545 R PFAM: Curli production assembly/transport component CsgG; KEGG: ebd:ECBD_2562 curli production assembly/transport component CsgG; curli production assembly/transport component CsgG complement(1221712..1222545) Rahnella sp. Y9602 10212140 YP_004211891.1 CDS Rahaq_1141 NC_015061.1 1222578 1223042 R PFAM: Curli production assembly/transport component CsgF; KEGG: enc:ECL_02602 curli assembly protein CsgF; curli production assembly/transport component CsgF complement(1222578..1223042) Rahnella sp. Y9602 10212141 YP_004211892.1 CDS Rahaq_1142 NC_015061.1 1223029 1223448 R PFAM: Curli assembly protein CsgE; KEGG: ent:Ent638_1555 curli assembly protein CsgE; curli assembly protein CsgE complement(1223029..1223448) Rahnella sp. Y9602 10212142 YP_004211893.1 CDS Rahaq_1143 NC_015061.1 1223429 1224079 R KEGG: ent:Ent638_1556 DNA-binding transcriptional regulator CsgD; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; LuxR family transcriptional regulator complement(1223429..1224079) Rahnella sp. Y9602 10212143 YP_004211894.1 CDS Rahaq_1144 NC_015061.1 1224951 1225439 D PFAM: Curlin associated repeat-containing protein; KEGG: ent:Ent638_1557 curlin minor subunit; curlin associated repeat-containing protein 1224951..1225439 Rahnella sp. Y9602 10212144 YP_004211895.1 CDS Rahaq_1145 NC_015061.1 1225479 1225955 D PFAM: Curlin associated repeat-containing protein; KEGG: cro:ROD_11011 major curlin subunit; curlin associated repeat-containing protein 1225479..1225955 Rahnella sp. Y9602 10212145 YP_004211896.1 CDS Rahaq_1146 NC_015061.1 1226046 1226375 D PFAM: Curli production protein CsgC; KEGG: sfx:S1113 autoagglutination protein; Curli production protein CsgC 1226046..1226375 Rahnella sp. Y9602 10212146 YP_004211897.1 CDS Rahaq_1147 NC_015061.1 1226387 1227412 R KEGG: spe:Spro_2422 high-affinity nickel-transporter; TIGRFAM: high-affinity nickel-transporter; PFAM: high-affinity nickel-transporter; high-affinity nickel-transporter complement(1226387..1227412) Rahnella sp. Y9602 10212147 YP_004211898.1 CDS Rahaq_1148 NC_015061.1 1227405 1229732 R KEGG: spe:Spro_2423 (NiFe) hydrogenase maturation protein HypF; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase; (NiFe) hydrogenase maturation protein HypF complement(1227405..1229732) Rahnella sp. Y9602 10212148 YP_004211899.1 CDS Rahaq_1149 NC_015061.1 1229797 1231968 R KEGG: spe:Spro_2424 formate dehydrogenase subunit alpha; TIGRFAM: formate dehydrogenase, subunit alpha; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; formate dehydrogenase subunit alpha complement(1229797..1231968) Rahnella sp. Y9602 10212149 YP_004211900.1 CDS Rahaq_1150 NC_015061.1 1231992 1232537 R KEGG: spe:Spro_2425 electron transport protein HydN; electron transport protein HydN complement(1231992..1232537) Rahnella sp. Y9602 10212150 YP_004211901.1 CDS Rahaq_1151 NC_015061.1 1232866 1233351 R KEGG: spe:Spro_2426 hydrogenase 3 maturation protease; TIGRFAM: hydrogenase maturation protease HycI; hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; hydrogenase maturation protease HycI complement(1232866..1233351) Rahnella sp. Y9602 10212151 YP_004211902.1 CDS Rahaq_1152 NC_015061.1 1233344 1233823 R PFAM: formate hydrogenlyase maturation HycH; KEGG: spe:Spro_2427 formate hydrogenlyase maturation HycH; formate hydrogenlyase maturation HycH complement(1233344..1233823) Rahnella sp. Y9602 10212152 YP_004211903.1 CDS Rahaq_1153 NC_015061.1 1233823 1234620 R PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: spe:Spro_2428 NADH ubiquinone oxidoreductase 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit complement(1233823..1234620) Rahnella sp. Y9602 10212153 YP_004211904.1 CDS Rahaq_1154 NC_015061.1 1234617 1235174 R KEGG: spe:Spro_2429 formate hydrogenlyase complex iron-sulfur subunit; formate hydrogenlyase complex iron-sulfur subunit complement(1234617..1235174) Rahnella sp. Y9602 10212154 YP_004211905.1 CDS Rahaq_1155 NC_015061.1 1235190 1236914 R PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; nickel-dependent hydrogenase large subunit; NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: spe:Spro_2430 NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH dehydrogenase (ubiquinone) 30 kDa subunit complement(1235190..1236914) Rahnella sp. Y9602 10212155 YP_004211906.1 CDS Rahaq_1156 NC_015061.1 1236959 1237912 R KEGG: spe:Spro_2431 respiratory-chain NADH dehydrogenase subunit 1; respiratory-chain NADH dehydrogenase subunit 1 complement(1236959..1237912) Rahnella sp. Y9602 10212156 YP_004211907.1 CDS Rahaq_1157 NC_015061.1 1237923 1239827 R PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: spe:Spro_2432 NADH dehydrogenase (quinone); NADH-ubiquinone/plastoquinone (complex I) oxidoreductase complement(1237923..1239827) Rahnella sp. Y9602 10212157 YP_004211908.1 CDS Rahaq_1158 NC_015061.1 1239824 1240453 R KEGG: spe:Spro_2433 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin complement(1239824..1240453) Rahnella sp. Y9602 10212158 YP_004211909.1 CDS Rahaq_1159 NC_015061.1 1240601 1241068 R KEGG: spe:Spro_2434 formate hydrogenlyase regulatory protein HycA; formate hydrogenlyase regulatory protein HycA complement(1240601..1241068) Rahnella sp. Y9602 10212159 YP_004211910.1 CDS Rahaq_1160 NC_015061.1 1241438 1241782 D KEGG: spe:Spro_2435 hydrogenase nickel incorporation protein; TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA; hydrogenase nickel incorporation protein HypA 1241438..1241782 Rahnella sp. Y9602 10212160 YP_004211911.1 CDS Rahaq_1161 NC_015061.1 1241813 1242592 D KEGG: asa:ASA_1799 hydrogenase accessory protein HypB; TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; hydrogenase nickel incorporation protein HypB 1241813..1242592 Rahnella sp. Y9602 10212161 YP_004211912.1 CDS Rahaq_1162 NC_015061.1 1242583 1242861 D KEGG: spe:Spro_2437 hydrogenase assembly chaperone HypC/HupF; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); hydrogenase assembly chaperone HypC/HupF 1242583..1242861 Rahnella sp. Y9602 10212162 YP_004211913.1 CDS Rahaq_1163 NC_015061.1 1242861 1244033 D KEGG: spe:Spro_2438 hydrogenase expression/formation protein HypD; TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; hydrogenase expression/formation protein HypD 1242861..1244033 Rahnella sp. Y9602 10212163 YP_004211914.1 CDS Rahaq_1164 NC_015061.1 1244026 1245048 D KEGG: ddc:Dd586_2723 hydrogenase expression/formation protein HypE; TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; hydrogenase expression/formation protein HypE 1244026..1245048 Rahnella sp. Y9602 10212164 YP_004211915.1 CDS Rahaq_1165 NC_015061.1 1245139 1247241 D KEGG: spe:Spro_2440 NifA subfamily transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; GAF domain protein; Fis family transcriptional regulator 1245139..1247241 Rahnella sp. Y9602 10212165 YP_004211916.1 CDS Rahaq_1166 NC_015061.1 1247247 1247789 R KEGG: pam:PANA_4086 hypothetical protein; hypothetical protein complement(1247247..1247789) Rahnella sp. Y9602 10212166 YP_004211917.1 CDS Rahaq_1167 NC_015061.1 1247786 1248193 R KEGG: pam:PANA_4087 hypothetical protein; hypothetical protein complement(1247786..1248193) Rahnella sp. Y9602 10212167 YP_004211918.1 CDS Rahaq_1168 NC_015061.1 1248223 1248546 R PFAM: Carboxymuconolactone decarboxylase; KEGG: kva:Kvar_2686 carboxymuconolactone decarboxylase; Carboxymuconolactone decarboxylase complement(1248223..1248546) Rahnella sp. Y9602 10212168 YP_004211919.1 CDS Rahaq_1169 NC_015061.1 1248652 1249533 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_08050 transcriptional regulator protein, LysR family; LysR family transcriptional regulator 1248652..1249533 Rahnella sp. Y9602 10212169 YP_004211920.1 CDS Rahaq_1170 NC_015061.1 1249544 1249744 R PFAM: DNA polymerase II subunit beta; KEGG: spe:Spro_1941 DNA polymerase III subunit theta; DNA polymerase II subunit beta complement(1249544..1249744) Rahnella sp. Y9602 10212170 YP_004211921.1 CDS Rahaq_1171 NC_015061.1 1249789 1250793 R KEGG: ecg:E2348C_3877 lipopolysaccharide core biosynthesis protein; hypothetical protein complement(1249789..1250793) Rahnella sp. Y9602 10212171 YP_004211922.1 CDS Rahaq_1172 NC_015061.1 1250945 1251850 D KEGG: ara:Arad_2932 dienelactone hydrolase protein; Carboxymethylenebutenolidase 1250945..1251850 Rahnella sp. Y9602 10212172 YP_004211923.1 CDS Rahaq_1173 NC_015061.1 1251905 1252750 R PFAM: Glutathione S-transferase domain; KEGG: esa:ESA_00138 glutathione S-transferase YghU; glutathione S-transferase complement(1251905..1252750) Rahnella sp. Y9602 10212173 YP_004211924.1 CDS Rahaq_1174 NC_015061.1 1252843 1253904 R KEGG: yen:YE3357 LacI-family regulatory protein; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator complement(1252843..1253904) Rahnella sp. Y9602 10212174 YP_004211925.1 CDS Rahaq_1175 NC_015061.1 1254189 1255364 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: enc:ECL_00620 hypothetical protein; oxidoreductase domain-containing protein 1254189..1255364 Rahnella sp. Y9602 10212175 YP_004211926.1 CDS Rahaq_1176 NC_015061.1 1255367 1256434 D PFAM: oxidoreductase domain protein; KEGG: enc:ECL_00619 dehydrogenase; oxidoreductase domain-containing protein 1255367..1256434 Rahnella sp. Y9602 10212176 YP_004211927.1 CDS Rahaq_1177 NC_015061.1 1256448 1257470 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: enc:ECL_00618 hypothetical protein; oxidoreductase domain-containing protein 1256448..1257470 Rahnella sp. Y9602 10212177 YP_004211928.1 CDS Rahaq_1178 NC_015061.1 1257512 1259050 D KEGG: cro:ROD_32731 major facilitator superfamily transporter; major facilitator superfamily transporter 1257512..1259050 Rahnella sp. Y9602 10212178 YP_004211929.1 CDS Rahaq_1179 NC_015061.1 1259093 1259620 R KEGG: eca:ECA0956 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; Phosphinothricin acetyltransferase complement(1259093..1259620) Rahnella sp. Y9602 10212179 YP_004211930.1 CDS Rahaq_1180 NC_015061.1 1259855 1260673 D KEGG: cko:CKO_05126 cytoplasmic membrane lipoprotein-28; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; lipoprotein 1259855..1260673 Rahnella sp. Y9602 10212180 YP_004211931.1 CDS Rahaq_1181 NC_015061.1 1260860 1262575 R PFAM: Protein of unknown function DUF2326; KEGG: kko:Kkor_0200 hypothetical protein; hypothetical protein complement(1260860..1262575) Rahnella sp. Y9602 10212181 YP_004211932.1 CDS Rahaq_1182 NC_015061.1 1262562 1262804 R KEGG: kko:Kkor_0199 hypothetical protein; hypothetical protein complement(1262562..1262804) Rahnella sp. Y9602 10212182 YP_004211933.1 CDS Rahaq_1183 NC_015061.1 1262801 1263766 R KEGG: kko:Kkor_0198 hypothetical protein; hypothetical protein complement(1262801..1263766) Rahnella sp. Y9602 10212183 YP_004211934.1 CDS Rahaq_1184 NC_015061.1 1264143 1264892 R KEGG: pct:PC1_0717 hypothetical protein; hypothetical protein complement(1264143..1264892) Rahnella sp. Y9602 10212184 YP_004211935.1 CDS Rahaq_1185 NC_015061.1 1265068 1265283 D KEGG: pct:PC1_0715 hypothetical protein; hypothetical protein 1265068..1265283 Rahnella sp. Y9602 10212185 YP_004211936.1 CDS Rahaq_1186 NC_015061.1 1265618 1268293 R KEGG: seh:SeHA_C2642 zinc-binding domain of primase-helicase family; PFAM: protein of unknown function DUF927; P4 alpha zinc-binding domain protein; TOPRIM domain-containing protein; SMART: P4 alpha zinc-binding domain protein; Toprim sub domain-containing protein; hypothetical protein complement(1265618..1268293) Rahnella sp. Y9602 10212186 YP_004211937.1 CDS Rahaq_1187 NC_015061.1 1268384 1269370 R PFAM: integrase family protein; KEGG: ecw:EcE24377A_0981 phage integrase family site specific recombinase; integrase family protein complement(1268384..1269370) Rahnella sp. Y9602 10212187 YP_004211938.1 CDS Rahaq_1188 NC_015061.1 1269409 1269675 R KEGG: ses:SARI_03877 hypothetical protein; hypothetical protein complement(1269409..1269675) Rahnella sp. Y9602 10212188 YP_004211939.1 CDS Rahaq_1189 NC_015061.1 1269668 1269871 R KEGG: ypy:YPK_4167 hypothetical protein; hypothetical protein complement(1269668..1269871) Rahnella sp. Y9602 10212189 YP_004211940.1 CDS Rahaq_1190 NC_015061.1 1269886 1270368 R KEGG: eca:ECA2753 phage-related protein; hypothetical protein complement(1269886..1270368) Rahnella sp. Y9602 10212190 YP_004211941.1 CDS Rahaq_1191 NC_015061.1 1270326 1270544 R PFAM: Prophage CP4-57 regulatory; KEGG: set:SEN1998 phage regulatory protein; phage transcriptional regulator AlpA complement(1270326..1270544) Rahnella sp. Y9602 10212191 YP_004211942.1 CDS Rahaq_1192 NC_015061.1 1270945 1272180 R PFAM: integrase family protein; KEGG: ecr:ECIAI1_4497 prophage integrase; integrase family protein complement(1270945..1272180) Rahnella sp. Y9602 10212192 YP_004211943.1 CDS Rahaq_1193 NC_015061.1 1272523 1273440 R PFAM: formate/nitrite transporter; KEGG: spe:Spro_3392 inner membrane protein; formate/nitrite transporter complement(1272523..1273440) Rahnella sp. Y9602 10212194 YP_004211944.1 CDS Rahaq_1194 NC_015061.1 1273689 1274330 D TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; KEGG: spe:Spro_3391 cytochrome c biogenesis protein CcmA; SMART: AAA ATPase; heme exporter protein CcmA 1273689..1274330 Rahnella sp. Y9602 10212195 YP_004211945.1 CDS Rahaq_1195 NC_015061.1 1274352 1275011 D KEGG: yen:YE1264 heme exporter protein B; TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; heme exporter protein CcmB 1274352..1275011 Rahnella sp. Y9602 10212196 YP_004211946.1 CDS Rahaq_1196 NC_015061.1 1275229 1275966 D KEGG: spe:Spro_3389 heme exporter protein CcmC; TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; heme exporter protein CcmC 1275229..1275966 Rahnella sp. Y9602 10212197 YP_004211947.1 CDS Rahaq_1197 NC_015061.1 1275963 1276223 D KEGG: spe:Spro_3388 heme exporter protein D (CcmD); TIGRFAM: heme exporter protein CcmD; PFAM: Heme exporter protein D (CcmD); heme exporter protein CcmD 1275963..1276223 Rahnella sp. Y9602 10212198 YP_004211948.1 CDS Rahaq_1198 NC_015061.1 1276220 1276714 D PFAM: CcmE/CycJ protein; KEGG: spe:Spro_3387 cytochrome c-type biogenesis protein CcmE; CcmE/CycJ protein 1276220..1276714 Rahnella sp. Y9602 10212199 YP_004211949.1 CDS Rahaq_1199 NC_015061.1 1276711 1278684 D KEGG: spe:Spro_3386 cytochrome c-type biogenesis protein CcmF; TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; cytochrome c-type biogenesis protein CcmF 1276711..1278684 Rahnella sp. Y9602 10212200 YP_004211950.1 CDS Rahaq_1200 NC_015061.1 1278681 1279232 D KEGG: spe:Spro_3385 periplasmic protein thiol--disulphide oxidoreductase DsbE; TIGRFAM: periplasmic protein thiol/disulphide oxidoreductase DsbE; PFAM: Redoxin domain protein; protein thiol/disulfide oxidoreductase DsbE 1278681..1279232 Rahnella sp. Y9602 10212201 YP_004211951.1 CDS Rahaq_1201 NC_015061.1 1279229 1279714 D PFAM: cytochrome C biogenesis protein; KEGG: spe:Spro_3384 cytochrome c biogenesis protein; cytochrome C biogenesis protein 1279229..1279714 Rahnella sp. Y9602 10212202 YP_004211952.1 CDS Rahaq_1202 NC_015061.1 1279711 1280925 D TIGRFAM: cytochrome c-type biogenesis protein CcmI; KEGG: spe:Spro_3383 TPR repeat-containing protein; cytochrome c-type biogenesis protein CcmI 1279711..1280925 Rahnella sp. Y9602 10212203 YP_004211953.1 CDS Rahaq_1203 NC_015061.1 1280960 1281727 D PFAM: VacJ family lipoprotein; KEGG: spe:Spro_3382 VacJ family lipoprotein; VacJ family lipoprotein 1280960..1281727 Rahnella sp. Y9602 10212204 YP_004211954.1 CDS Rahaq_1204 NC_015061.1 1281795 1283072 R PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: yen:YE1274 long-chain fatty acid outer membrane transporter; aromatic hydrocarbon degradation membrane protein complement(1281795..1283072) Rahnella sp. Y9602 10212205 YP_004211955.1 CDS Rahaq_1205 NC_015061.1 1283489 1283821 D PFAM: Conserved hypothetical protein CHP00743; KEGG: dda:Dd703_2599 hypothetical protein; hypothetical protein 1283489..1283821 Rahnella sp. Y9602 10212206 YP_004211956.1 CDS Rahaq_1206 NC_015061.1 1284141 1285454 D TIGRFAM: acetyl-CoA C-acyltransferase FadI; acetyl-CoA acetyltransferase; KEGG: spe:Spro_3379 3-ketoacyl-CoA thiolase; PFAM: Thiolase-like; acetyl-CoA C-acyltransferase FadI 1284141..1285454 Rahnella sp. Y9602 10212207 YP_004211957.1 CDS Rahaq_1207 NC_015061.1 1285451 1287652 D KEGG: spe:Spro_3378 multifunctional fatty acid oxidation complex subunit alpha; TIGRFAM: fatty acid oxidation complex, subunit alpha FadJ; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; fatty acid oxidation complex, subunit alpha FadJ 1285451..1287652 Rahnella sp. Y9602 10212208 YP_004211958.1 CDS Rahaq_1208 NC_015061.1 1288081 1288569 D KEGG: spe:Spro_3377 phosphohistidine phosphatase; TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; phosphohistidine phosphatase, SixA 1288081..1288569 Rahnella sp. Y9602 10212209 YP_004211959.1 CDS Rahaq_1209 NC_015061.1 1288655 1289194 R KEGG: ebd:ECBD_1328 hypothetical protein; PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2; Smr protein/MutS2 complement(1288655..1289194) Rahnella sp. Y9602 10212210 YP_004211960.1 CDS Rahaq_1210 NC_015061.1 1289398 1290330 D KEGG: spe:Spro_3375 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; TIGRFAM: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; modification methylase, HemK family; PFAM: methyltransferase small; protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 1289398..1290330 Rahnella sp. Y9602 10212211 YP_004211961.1 CDS Rahaq_1211 NC_015061.1 1290413 1291498 D TIGRFAM: chorismate synthase; KEGG: spe:Spro_3374 chorismate synthase; PFAM: chorismate synthase; chorismate synthase 1290413..1291498 Rahnella sp. Y9602 10212212 YP_004211962.1 CDS Rahaq_1212 NC_015061.1 1291507 1292358 D PFAM: peptidase U6 penicillin-insensitive murein endopeptidase; KEGG: spe:Spro_3373 penicillin-insensitive murein endopeptidase; peptidase U6 penicillin-insensitive murein endopeptidase 1291507..1292358 Rahnella sp. Y9602 10212213 YP_004211963.1 CDS Rahaq_1213 NC_015061.1 1292404 1293204 D PFAM: protein of unknown function DUF81; KEGG: spe:Spro_3372 hypothetical protein; hypothetical protein 1292404..1293204 Rahnella sp. Y9602 10212214 YP_004211964.1 CDS Rahaq_1214 NC_015061.1 1293307 1293864 D PFAM: protein of unknown function DUF462; KEGG: spe:Spro_3371 hypothetical protein; hypothetical protein 1293307..1293864 Rahnella sp. Y9602 10212215 YP_004211965.1 CDS Rahaq_1215 NC_015061.1 1293889 1294167 D PFAM: YfcL protein; KEGG: spe:Spro_3370 YfcL protein; hypothetical protein 1293889..1294167 Rahnella sp. Y9602 10212216 YP_004211966.1 CDS Rahaq_1216 NC_015061.1 1294241 1296271 R KEGG: spe:Spro_3369 5-methylaminomethyl-2-thiouridine methyltransferase; TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; PFAM: protein of unknown function DUF752; FAD dependent oxidoreductase; tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC complement(1294241..1296271) Rahnella sp. Y9602 10212217 YP_004211967.1 CDS Rahaq_1217 NC_015061.1 1296441 1297661 D PFAM: Beta-ketoacyl synthase; KEGG: spe:Spro_3368 3-oxoacyl-(acyl carrier protein) synthase I; Beta-ketoacyl synthase 1296441..1297661 Rahnella sp. Y9602 10212218 YP_004211968.1 CDS Rahaq_1218 NC_015061.1 1297893 1298378 D KEGG: plu:plu3520 hypothetical protein; hypothetical protein 1297893..1298378 Rahnella sp. Y9602 10212219 YP_004211969.1 CDS Rahaq_1219 NC_015061.1 1298464 1299936 D KEGG: ebi:EbC_05650 iron-regulated membrane protein; iron-regulated membrane protein 1298464..1299936 Rahnella sp. Y9602 10212220 YP_004211970.1 CDS Rahaq_1220 NC_015061.1 1299954 1301081 D PFAM: Citrate transporter; KEGG: spe:Spro_3360 citrate transporter; citrate transporter 1299954..1301081 Rahnella sp. Y9602 10212221 YP_004211971.1 CDS Rahaq_1221 NC_015061.1 1301074 1302639 R KEGG: eta:ETA_11630 regulatory protein GntR; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(1301074..1302639) Rahnella sp. Y9602 10212222 YP_004211972.1 CDS Rahaq_1222 NC_015061.1 1302662 1303114 D KEGG: ebi:EbC_31170 probable rhodanese-related sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; rhodanese domain-containing protein 1302662..1303114 Rahnella sp. Y9602 10212223 YP_004211973.1 CDS Rahaq_1223 NC_015061.1 1303133 1304182 R KEGG: yen:YE1298 flagella biosynthesis regulator; flagella biosynthesis regulator, Flk complement(1303133..1304182) Rahnella sp. Y9602 10212224 YP_004211974.1 CDS Rahaq_1224 NC_015061.1 1304437 1305333 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: yen:YE1305 hypothetical protein; hypothetical protein complement(1304437..1305333) Rahnella sp. Y9602 10212225 YP_004211975.1 CDS Rahaq_1225 NC_015061.1 1305462 1306253 D KEGG: ypb:YPTS_2716 AraC family transcriptional regulator; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 1305462..1306253 Rahnella sp. Y9602 10212226 YP_004211976.1 CDS Rahaq_1226 NC_015061.1 1306354 1307487 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: spe:Spro_3336 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 1306354..1307487 Rahnella sp. Y9602 10212227 YP_004211977.1 CDS Rahaq_1227 NC_015061.1 1307599 1308609 D KEGG: spe:Spro_3335 semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding; aspartate-semialdehyde dehydrogenase 1307599..1308609 Rahnella sp. Y9602 10212228 YP_004211978.1 CDS Rahaq_1228 NC_015061.1 1308612 1309442 D KEGG: dda:Dd703_2576 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; tRNA pseudouridine synthase A 1308612..1309442 Rahnella sp. Y9602 10212229 YP_004211979.1 CDS Rahaq_1229 NC_015061.1 1309502 1310170 D PFAM: SNARE associated Golgi protein; KEGG: spe:Spro_3333 hypothetical protein; hypothetical protein 1309502..1310170 Rahnella sp. Y9602 10212230 YP_004211980.1 CDS Rahaq_1230 NC_015061.1 1310433 1311347 D KEGG: spe:Spro_3332 acetyl-CoA carboxylase subunit beta; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, subunit beta; PFAM: carboxyl transferase; acetyl-CoA carboxylase, carboxyl transferase subunit beta 1310433..1311347 Rahnella sp. Y9602 10212231 YP_004211981.1 CDS Rahaq_1231 NC_015061.1 1311536 1312822 D KEGG: spe:Spro_3331 bifunctional folylpolyglutamate synthase/dihydrofolate synthase; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; bifunctional folylpolyglutamate synthase/dihydrofolate synthase 1311536..1312822 Rahnella sp. Y9602 10212232 YP_004211982.1 CDS Rahaq_1232 NC_015061.1 1312812 1313585 D PFAM: Sporulation domain-containing protein; KEGG: spe:Spro_3330 hypothetical protein; sporulation domain-containing protein 1312812..1313585 Rahnella sp. Y9602 10212233 YP_004211983.1 CDS Rahaq_1233 NC_015061.1 1313933 1314424 D PFAM: Colicin V production protein; KEGG: pwa:Pecwa_1470 colicin V production protein; colicin V production protein 1313933..1314424 Rahnella sp. Y9602 10212234 YP_004211984.1 CDS Rahaq_1234 NC_015061.1 1314455 1315972 D KEGG: yen:YE1315 amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; amidophosphoribosyltransferase 1314455..1315972 Rahnella sp. Y9602 10212235 YP_004211985.1 CDS Rahaq_1235 NC_015061.1 1316103 1316675 D KEGG: spe:Spro_3327 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1316103..1316675 Rahnella sp. Y9602 10212236 YP_004211986.1 CDS Rahaq_1236 NC_015061.1 1316998 1317780 D TIGRFAM: cationic amino acid ABC transporter periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: spe:Spro_3326 cationic amino acid ABC transporter periplasmic binding protein; SMART: extracellular solute-binding protein family 3; cationic amino acid ABC transporter periplasmic binding protein 1316998..1317780 Rahnella sp. Y9602 10212237 YP_004211987.1 CDS Rahaq_1237 NC_015061.1 1317887 1318573 D KEGG: spe:Spro_3325 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 1317887..1318573 Rahnella sp. Y9602 10212238 YP_004211988.1 CDS Rahaq_1238 NC_015061.1 1318570 1319283 D KEGG: spe:Spro_3324 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 1318570..1319283 Rahnella sp. Y9602 10212239 YP_004211989.1 CDS Rahaq_1239 NC_015061.1 1319311 1320084 D KEGG: spe:Spro_3323 histidine/lysine/arginine/ornithine transporter subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1319311..1320084 Rahnella sp. Y9602 10212240 YP_004211990.1 CDS Rahaq_1240 NC_015061.1 1320139 1321371 R TIGRFAM: peptidase T; KEGG: bba:Bd2900 peptidase T; PFAM: peptidase dimerisation domain protein; peptidase M20; peptidase T complement(1320139..1321371) Rahnella sp. Y9602 10212241 YP_004211991.1 CDS Rahaq_1241 NC_015061.1 1321531 1323126 D PFAM: extracellular solute-binding protein family 5; KEGG: enc:ECL_02029 extracellular solute-binding protein; family 5 extracellular solute-binding protein 1321531..1323126 Rahnella sp. Y9602 10212242 YP_004211992.1 CDS Rahaq_1242 NC_015061.1 1323782 1324678 R PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; KEGG: spe:Spro_3322 hypothetical protein; hypothetical protein complement(1323782..1324678) Rahnella sp. Y9602 10212243 YP_004211993.1 CDS Rahaq_1243 NC_015061.1 1324821 1325450 R PFAM: Glutathione S-transferase domain; KEGG: spe:Spro_3320 glutathione S-transferase domain-containing protein; glutathione S-transferase complement(1324821..1325450) Rahnella sp. Y9602 10212244 YP_004211994.1 CDS Rahaq_1244 NC_015061.1 1325767 1326399 D PFAM: NUDIX hydrolase; KEGG: spe:Spro_3318 NUDIX hydrolase; NUDIX hydrolase 1325767..1326399 Rahnella sp. Y9602 10212245 YP_004211995.1 CDS Rahaq_1245 NC_015061.1 1326438 1327454 R KEGG: enc:ECL_03647 LacI family transcription regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator complement(1326438..1327454) Rahnella sp. Y9602 10212246 YP_004211996.1 CDS Rahaq_1246 NC_015061.1 1327809 1328252 D PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: cro:ROD_27051 PTS system EIIA component; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 1327809..1328252 Rahnella sp. Y9602 10212247 YP_004211997.1 CDS Rahaq_1247 NC_015061.1 1328390 1328671 D PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: set:SEN2325 sugar phosphotransferase component II B; PTS system lactose/cellobiose-specific transporter subunit IIB 1328390..1328671 Rahnella sp. Y9602 10212248 YP_004211998.1 CDS Rahaq_1248 NC_015061.1 1328722 1330098 D KEGG: spq:SPAB_00632 PTS system ascorbate-specific transporter subunit IIC; PTS system ascorbate-specific transporter subunit IIC 1328722..1330098 Rahnella sp. Y9602 10212249 YP_004211999.1 CDS Rahaq_1249 NC_015061.1 1330203 1331036 D PFAM: Transketolase domain-containing protein; KEGG: cko:CKO_00492 hypothetical protein; transketolase 1330203..1331036 Rahnella sp. Y9602 10212250 YP_004212000.1 CDS Rahaq_1250 NC_015061.1 1331029 1331982 D PFAM: Transketolase domain-containing protein; Transketolase central region; KEGG: cko:CKO_00493 hypothetical protein; transketolase 1331029..1331982 Rahnella sp. Y9602 10212251 YP_004212001.1 CDS Rahaq_1251 NC_015061.1 1332077 1334236 R KEGG: ypb:YPTS_2692 phosphate acetyltransferase; TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; DRTGG domain protein; phosphate acetyltransferase complement(1332077..1334236) Rahnella sp. Y9602 10212252 YP_004212002.1 CDS Rahaq_1252 NC_015061.1 1334403 1335605 R KEGG: spe:Spro_3316 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; acetate kinase complement(1334403..1335605) Rahnella sp. Y9602 10212253 YP_004212003.1 CDS Rahaq_1253 NC_015061.1 1335709 1335897 D hypothetical protein 1335709..1335897 Rahnella sp. Y9602 10212254 YP_004212004.1 CDS Rahaq_1254 NC_015061.1 1336126 1336581 D PFAM: protein of unknown function DUF412; KEGG: spe:Spro_3315 hypothetical protein; hypothetical protein 1336126..1336581 Rahnella sp. Y9602 10212255 YP_004212005.1 CDS Rahaq_1255 NC_015061.1 1336777 1337271 D PFAM: YfbU family protein; KEGG: yen:YE1336 hypothetical protein; hypothetical protein 1336777..1337271 Rahnella sp. Y9602 10212256 YP_004212006.1 CDS Rahaq_1256 NC_015061.1 1337296 1337949 D KEGG: spe:Spro_3313 phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 1337296..1337949 Rahnella sp. Y9602 10212257 YP_004212007.1 CDS Rahaq_1257 NC_015061.1 1338268 1340100 D PFAM: Citrate transporter; TrkA-C domain protein; KEGG: yen:YE1339 ion transport protein; citrate transporter 1338268..1340100 Rahnella sp. Y9602 10212258 YP_004212008.1 CDS Rahaq_1258 NC_015061.1 1340109 1340708 R PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: spe:Spro_3311 hypothetical protein; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase complement(1340109..1340708) Rahnella sp. Y9602 10212259 YP_004212009.1 CDS Rahaq_1259 NC_015061.1 1340826 1342040 R PFAM: aminotransferase class I and II; KEGG: yen:YE1341 aminotransferase AlaT; class I and II aminotransferase complement(1340826..1342040) Rahnella sp. Y9602 10212260 YP_004212010.1 CDS Rahaq_1260 NC_015061.1 1343028 1343972 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3309 LysR family transcriptional regulator; LysR family transcriptional regulator 1343028..1343972 Rahnella sp. Y9602 10212261 YP_004212011.1 CDS Rahaq_1261 NC_015061.1 1344677 1345120 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: spe:Spro_3308 NADH dehydrogenase subunit A; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 1344677..1345120 Rahnella sp. Y9602 10212262 YP_004212012.1 CDS Rahaq_1262 NC_015061.1 1345143 1345817 D TIGRFAM: NADH-quinone oxidoreductase, B subunit; KEGG: etr:ETAE_2384 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductase; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; NADH-quinone oxidoreductase subunit B 1345143..1345817 Rahnella sp. Y9602 10212263 YP_004212013.1 CDS Rahaq_1263 NC_015061.1 1345907 1347706 D KEGG: spe:Spro_3306 bifunctional NADH:ubiquinone oxidoreductase subunit C/D; TIGRFAM: NADH dehydrogenase I, D subunit; NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH dehydrogenase I subunit D 1345907..1347706 Rahnella sp. Y9602 10212264 YP_004212014.1 CDS Rahaq_1264 NC_015061.1 1347709 1348245 D KEGG: cko:CKO_00511 NADH dehydrogenase subunit E; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; NADH-quinone oxidoreductase subunit E 1347709..1348245 Rahnella sp. Y9602 10212265 YP_004212015.1 CDS Rahaq_1265 NC_015061.1 1348242 1349603 D TIGRFAM: NADH-quinone oxidoreductase, F subunit; KEGG: yen:YE1348 NADH dehydrogenase I subunit F; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH-quinone oxidoreductase subunit F 1348242..1349603 Rahnella sp. Y9602 10212266 YP_004212016.1 CDS Rahaq_1266 NC_015061.1 1349747 1352473 D KEGG: spe:Spro_3303 NADH dehydrogenase subunit G; TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; NADH-quinone oxidoreductase subunit G 1349747..1352473 Rahnella sp. Y9602 10212267 YP_004212017.1 CDS Rahaq_1267 NC_015061.1 1352470 1353447 D PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: yen:YE1350 NADH dehydrogenase subunit H; respiratory-chain NADH dehydrogenase subunit 1 1352470..1353447 Rahnella sp. Y9602 10212268 YP_004212018.1 CDS Rahaq_1268 NC_015061.1 1353462 1354004 D TIGRFAM: NADH-quinone oxidoreductase, chain I; KEGG: spe:Spro_3301 NADH dehydrogenase subunit I; NADH-quinone oxidoreductase subunit I 1353462..1354004 Rahnella sp. Y9602 10212269 YP_004212019.1 CDS Rahaq_1269 NC_015061.1 1354017 1354577 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: ypb:YPTS_2674 NADH dehydrogenase subunit J; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 1354017..1354577 Rahnella sp. Y9602 10212270 YP_004212020.1 CDS Rahaq_1270 NC_015061.1 1354574 1354876 D PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: spe:Spro_3299 NADH dehydrogenase subunit K; NADH-ubiquinone oxidoreductase chain 4L 1354574..1354876 Rahnella sp. Y9602 10212271 YP_004212021.1 CDS Rahaq_1271 NC_015061.1 1354873 1356720 D KEGG: spe:Spro_3298 NADH dehydrogenase subunit L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; proton-translocating NADH-quinone oxidoreductase subunit L 1354873..1356720 Rahnella sp. Y9602 10212272 YP_004212022.1 CDS Rahaq_1272 NC_015061.1 1356818 1358347 D KEGG: spe:Spro_3297 NADH dehydrogenase subunit M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 1356818..1358347 Rahnella sp. Y9602 10212273 YP_004212023.1 CDS Rahaq_1273 NC_015061.1 1358354 1359814 D KEGG: yen:YE1356 NADH dehydrogenase subunit N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase, chain N 1358354..1359814 Rahnella sp. Y9602 10212274 YP_004212024.1 CDS Rahaq_1274 NC_015061.1 1360007 1360522 D PFAM: protein of unknown function DUF1097; KEGG: yen:YE1358 hypothetical protein; hypothetical protein 1360007..1360522 Rahnella sp. Y9602 10212275 YP_004212025.1 CDS Rahaq_1275 NC_015061.1 1360635 1360943 D PFAM: protein of unknown function DUF883 ElaB; KEGG: epy:EpC_12740 hypothetical protein; hypothetical protein 1360635..1360943 Rahnella sp. Y9602 10212276 YP_004212026.1 CDS Rahaq_1276 NC_015061.1 1361179 1362516 D KEGG: ypp:YPDSF_1938 menaquinone-specific isochorismate synthase; TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like; isochorismate synthase 1361179..1362516 Rahnella sp. Y9602 10212277 YP_004212027.1 CDS Rahaq_1277 NC_015061.1 1362540 1364213 D KEGG: spe:Spro_3283 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate synthase; TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 1362540..1364213 Rahnella sp. Y9602 10212278 YP_004212028.1 CDS Rahaq_1278 NC_015061.1 1364210 1365007 D KEGG: eca:ECA1212 acyl-CoA thioester hydrolase YfbB; PFAM: alpha/beta hydrolase fold; 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 1364210..1365007 Rahnella sp. Y9602 10212279 YP_004212029.1 CDS Rahaq_1279 NC_015061.1 1364994 1365851 D KEGG: yen:YE1377 naphthoate synthase; TIGRFAM: naphthoate synthase; PFAM: Enoyl-CoA hydratase/isomerase; naphthoate synthase 1364994..1365851 Rahnella sp. Y9602 10212280 YP_004212030.1 CDS Rahaq_1280 NC_015061.1 1365851 1366852 D KEGG: eca:ECA1214 O-succinylbenzoate synthase; TIGRFAM: o-succinylbenzoic acid (OSB) synthetase; o-succinylbenzoic acid (OSB) synthetase 1365851..1366852 Rahnella sp. Y9602 10212281 YP_004212031.1 CDS Rahaq_1281 NC_015061.1 1366837 1368210 D KEGG: ddd:Dda3937_01785 O-succinylbenzoate-CoA ligase; TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; o-succinylbenzoate--CoA ligase 1366837..1368210 Rahnella sp. Y9602 10212282 YP_004212032.1 CDS Rahaq_1282 NC_015061.1 1368278 1369711 R KEGG: ypb:YPTS_1334 catalase domain-containing protein; PFAM: Catalase related subgroup; Catalase domain protein; catalase complement(1368278..1369711) Rahnella sp. Y9602 10212283 YP_004212033.1 CDS Rahaq_1283 NC_015061.1 1370015 1370560 D PFAM: YfaZ family protein; KEGG: cro:ROD_26631 hypothetical protein; hypothetical protein 1370015..1370560 Rahnella sp. Y9602 10212284 YP_004212034.1 CDS Rahaq_1284 NC_015061.1 1370688 1371893 D KEGG: spe:Spro_3275 competence damage-inducible protein A; TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; competence/damage-inducible protein CinA 1370688..1371893 Rahnella sp. Y9602 10212285 YP_004212035.1 CDS Rahaq_1285 NC_015061.1 1372033 1372293 R PFAM: ferredoxin; KEGG: epy:EpC_12800 2Fe-2S ferredoxin YfaE; ferredoxin complement(1372033..1372293) Rahnella sp. Y9602 10212286 YP_004212036.1 CDS Rahaq_1286 NC_015061.1 1372294 1373424 R KEGG: spe:Spro_3272 ribonucleotide-diphosphate reductase subunit beta; PFAM: ribonucleotide reductase; ribonucleoside-diphosphate reductase complement(1372294..1373424) Rahnella sp. Y9602 10212287 YP_004212037.1 CDS Rahaq_1287 NC_015061.1 1373497 1375779 R KEGG: yen:YE1393 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, subunit alpha; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein; ATP-cone domain protein; ribonucleoside-diphosphate reductase subunit alpha complement(1373497..1375779) Rahnella sp. Y9602 10212288 YP_004212038.1 CDS Rahaq_1288 NC_015061.1 1376224 1376445 R KEGG: cqu:CpipJ_CPIJ002807 hypothetical protein; hypothetical protein complement(1376224..1376445) Rahnella sp. Y9602 10212289 YP_004212039.1 CDS Rahaq_1289 NC_015061.1 1376490 1380278 D KEGG: efe:EFER_0932 adhesin; TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; polymorphic outer membrane protein; PFAM: Autotransporter beta- domain protein; Pertactin; Polymorphic membrane protein Chlamydia; outer membrane autotransporter barrel domain-containing protein 1376490..1380278 Rahnella sp. Y9602 10212290 YP_004212040.1 CDS Rahaq_1290 NC_015061.1 1380346 1381068 R TIGRFAM: ubiquinone biosynthesis O-methyltransferase; KEGG: spe:Spro_3270 3-demethylubiquinone-9 3-methyltransferase; PFAM: methyltransferase type 11; ubiquinone biosynthesis O-methyltransferase complement(1380346..1381068) Rahnella sp. Y9602 10212291 YP_004212041.1 CDS Rahaq_1291 NC_015061.1 1381328 1383979 D SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA gyrase, A subunit; KEGG: spe:Spro_3269 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; DNA gyrase subunit A 1381328..1383979 Rahnella sp. Y9602 10212292 YP_004212042.1 CDS Rahaq_1292 NC_015061.1 1384156 1387017 D manually curated; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Signal transduction histidine kinase RcsC, alpha-beta loop-like; response regulator receiver; KEGG: spe:Spro_3268 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; integral membrane sensor hybrid histidine kinase 1384156..1387017 Rahnella sp. Y9602 10212293 YP_004212043.1 CDS Rahaq_1293 NC_015061.1 1387094 1387744 R KEGG: ebi:EbC_30380 capsular synthesis regulator component B; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; LuxR family transcriptional regulator complement(1387094..1387744) Rahnella sp. Y9602 10212294 YP_004212044.1 CDS Rahaq_1294 NC_015061.1 1387749 1390442 R KEGG: spe:Spro_3266 phosphotransfer intermediate protein in two-component regulatory system with RcsBC; PFAM: ATP-binding region ATPase domain protein; Hpt domain protein; SMART: ATP-binding region ATPase domain protein; multi-sensor signal transduction histidine kinase complement(1387749..1390442) Rahnella sp. Y9602 10212295 YP_004212045.1 CDS Rahaq_1295 NC_015061.1 1391313 1405112 D SMART: PKD domain containing protein; KEGG: ebi:EbC_30340 hemagglutinin/hemolysin/adhesin-related protein; PKD domain-containing protein 1391313..1405112 Rahnella sp. Y9602 10212296 YP_004212046.1 CDS Rahaq_1296 NC_015061.1 1405249 1406625 D KEGG: ebi:EbC_30330 type I secretion protein; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; TolC family type I secretion outer membrane protein 1405249..1406625 Rahnella sp. Y9602 10212297 YP_004212047.1 CDS Rahaq_1297 NC_015061.1 1406676 1408853 D TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: ebi:EbC_30320 type I secretion protein, ATP-binding protein; SMART: AAA ATPase; type I secretion system ATPase 1406676..1408853 Rahnella sp. Y9602 10212298 YP_004212048.1 CDS Rahaq_1298 NC_015061.1 1408871 1410040 D KEGG: ebi:EbC_30310 type I secretion membrane protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; HlyD family type I secretion membrane fusion protein 1408871..1410040 Rahnella sp. Y9602 10212299 YP_004212049.1 CDS Rahaq_1299 NC_015061.1 1410679 1412667 R KEGG: pwa:Pecwa_0570 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein repeat-containing protein complement(1410679..1412667) Rahnella sp. Y9602 10212300 YP_004212050.1 CDS Rahaq_1300 NC_015061.1 1413442 1414569 D PFAM: porin Gram-negative type; KEGG: spe:Spro_3264 outer membrane porin protein C; porin 1413442..1414569 Rahnella sp. Y9602 10212301 YP_004212051.1 CDS Rahaq_1301 NC_015061.1 1414671 1415057 R KEGG: spe:Spro_2833 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(1414671..1415057) Rahnella sp. Y9602 10212302 YP_004212052.1 CDS Rahaq_1302 NC_015061.1 1415586 1417358 R KEGG: etr:ETAE_1324 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; peptidoglycan glycosyltransferase complement(1415586..1417358) Rahnella sp. Y9602 10212303 YP_004212053.1 CDS Rahaq_1303 NC_015061.1 1417578 1417820 R PFAM: DinI family protein; KEGG: dze:Dd1591_3349 DinI family protein; DinI family protein complement(1417578..1417820) Rahnella sp. Y9602 10212304 YP_004212054.1 CDS Rahaq_1304 NC_015061.1 1417895 1418860 R KEGG: dda:Dd703_2708 glutathione transferase; glutathione transferase complement(1417895..1418860) Rahnella sp. Y9602 10212305 YP_004212055.1 CDS Rahaq_1305 NC_015061.1 1419054 1420835 R PFAM: sulfatase; KEGG: yen:YE1419 hypothetical protein; sulfatase complement(1419054..1420835) Rahnella sp. Y9602 10212306 YP_004212056.1 CDS Rahaq_1306 NC_015061.1 1420860 1421087 R PFAM: protein of unknown function DUF1414; KEGG: yen:YE1420 hypothetical protein; hypothetical protein complement(1420860..1421087) Rahnella sp. Y9602 10212307 YP_004212057.1 CDS Rahaq_1307 NC_015061.1 1421410 1422414 D PFAM: 37kDa nucleoid-associated protein; KEGG: ddc:Dd586_2386 37kDa nucleoid-associated protein; hypothetical protein 1421410..1422414 Rahnella sp. Y9602 10212308 YP_004212058.1 CDS Rahaq_1308 NC_015061.1 1422642 1422932 R PFAM: Ribosomal protein L25-like; KEGG: spe:Spro_3254 50S ribosomal protein L25; 50S ribosomal protein L25 complement(1422642..1422932) Rahnella sp. Y9602 10212309 YP_004212059.1 CDS Rahaq_1309 NC_015061.1 1423093 1424856 R KEGG: spe:Spro_3253 type III restriction protein res subunit; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; type III restriction protein res subunit complement(1423093..1424856) Rahnella sp. Y9602 10212310 YP_004212060.1 CDS Rahaq_1310 NC_015061.1 1425189 1425896 D KEGG: spe:Spro_3252 16S rRNA pseudouridylate synthase A; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; pseudouridine synthase 1425189..1425896 Rahnella sp. Y9602 10212311 YP_004212061.1 CDS Rahaq_1311 NC_015061.1 1425924 1427129 D KEGG: ypy:YPK_2792 bicyclomycin/multidrug efflux system; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; Bcr/CflA subfamily drug resistance transporter 1425924..1427129 Rahnella sp. Y9602 10212312 YP_004212062.1 CDS Rahaq_1312 NC_015061.1 1427373 1428725 R PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE1366 sugar transporter; major facilitator superfamily protein complement(1427373..1428725) Rahnella sp. Y9602 10212313 YP_004212063.1 CDS Rahaq_1313 NC_015061.1 1428901 1429884 R KEGG: ypb:YPTS_2664 LacI family transcription regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator complement(1428901..1429884) Rahnella sp. Y9602 10212314 YP_004212064.1 CDS Rahaq_1314 NC_015061.1 1430090 1430854 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ypb:YPTS_2666 gluconate 5-dehydrogenase; short-chain dehydrogenase/reductase SDR 1430090..1430854 Rahnella sp. Y9602 10212315 YP_004212065.1 CDS Rahaq_1315 NC_015061.1 1430863 1431606 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rhi:NGR_b20270 oxidoreductase; short-chain dehydrogenase/reductase SDR 1430863..1431606 Rahnella sp. Y9602 10212316 YP_004212066.1 CDS Rahaq_1316 NC_015061.1 1431668 1433071 R KEGG: yen:YE1369 dehydrogenase, cytochrome c subunit; PFAM: cytochrome c class I; gluconate 2-dehydrogenase (acceptor) complement(1431668..1433071) Rahnella sp. Y9602 10212317 YP_004212067.1 CDS Rahaq_1317 NC_015061.1 1433068 1434723 R PFAM: FAD dependent oxidoreductase; KEGG: yen:YE1370 dehydrogenase subunit; FAD dependent oxidoreductase complement(1433068..1434723) Rahnella sp. Y9602 10212318 YP_004212068.1 CDS Rahaq_1318 NC_015061.1 1434723 1435340 R KEGG: yen:YE1370A dehydrogenase subunit; dehydrogenase subunit complement(1434723..1435340) Rahnella sp. Y9602 10212319 YP_004212069.1 CDS Rahaq_1319 NC_015061.1 1435993 1436361 D KEGG: spe:Spro_3250 hypothetical protein; hypothetical protein 1435993..1436361 Rahnella sp. Y9602 10212320 YP_004212070.1 CDS Rahaq_1320 NC_015061.1 1436405 1438027 R KEGG: ddc:Dd586_2375 ABC transporter; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter complement(1436405..1438027) Rahnella sp. Y9602 10212321 YP_004212071.1 CDS Rahaq_1321 NC_015061.1 1438029 1439072 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3248 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1438029..1439072) Rahnella sp. Y9602 10212322 YP_004212072.1 CDS Rahaq_1322 NC_015061.1 1439072 1440166 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3247 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1439072..1440166) Rahnella sp. Y9602 10212323 YP_004212073.1 CDS Rahaq_1323 NC_015061.1 1440177 1441982 R PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE1430 substrate-binding transport protein; family 5 extracellular solute-binding protein complement(1440177..1441982) Rahnella sp. Y9602 10212324 YP_004212074.1 CDS Rahaq_1324 NC_015061.1 1442177 1443859 R KEGG: spe:Spro_3245 hypothetical protein; PFAM: EAL domain protein; SMART: EAL domain protein; diguanylate phosphodiesterase complement(1442177..1443859) Rahnella sp. Y9602 10212325 YP_004212075.1 CDS Rahaq_1325 NC_015061.1 1443926 1444501 R PFAM: NLP/P60 protein; KEGG: spe:Spro_3244 outer membrane lipoprotein; NLP/P60 protein complement(1443926..1444501) Rahnella sp. Y9602 10212326 YP_004212076.1 CDS Rahaq_1326 NC_015061.1 1444929 1445642 R KEGG: spe:Spro_3242 phosphoesterase PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; phosphoesterase PA-phosphatase-like protein complement(1444929..1445642) Rahnella sp. Y9602 10212327 YP_004212077.1 CDS Rahaq_1327 NC_015061.1 1445703 1446677 R PFAM: cobalamin synthesis protein P47K; KEGG: spe:Spro_3241 cobalamin synthesis protein P47K; cobalamin synthesis protein P47K complement(1445703..1446677) Rahnella sp. Y9602 10212328 YP_004212078.1 CDS Rahaq_1328 NC_015061.1 1446892 1447203 D KEGG: spe:Spro_3240 hypothetical protein; hypothetical protein 1446892..1447203 Rahnella sp. Y9602 10212329 YP_004212079.1 CDS Rahaq_1329 NC_015061.1 1447453 1448184 D KEGG: ypb:YPTS_1405 GntR domain-containing protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 1447453..1448184 Rahnella sp. Y9602 10212330 YP_004212080.1 CDS Rahaq_1330 NC_015061.1 1448245 1449714 R PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: spe:Spro_3239 mannitol dehydrogenase domain-containing protein; mannitol dehydrogenase complement(1448245..1449714) Rahnella sp. Y9602 10212331 YP_004212081.1 CDS Rahaq_1331 NC_015061.1 1449966 1451288 R PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein; transposase IS4 family protein complement(1449966..1451288) Rahnella sp. Y9602 10212332 YP_004212082.1 CDS Rahaq_1332 NC_015061.1 1451409 1451981 R KEGG: ddc:Dd586_2369 elongation factor P-like protein YeiP; TIGRFAM: elongation factor P-like protein YeiP; PFAM: Elongation factor P ; Elongation factor P/YeiP protein; Elongation factor KOW-like domain-containing protein; elongation factor P-like protein YeiP complement(1451409..1451981) Rahnella sp. Y9602 10212333 YP_004212083.1 CDS Rahaq_1333 NC_015061.1 1452226 1452480 D PFAM: protein of unknown function UPF0153; KEGG: spe:Spro_3235 hypothetical protein; hypothetical protein 1452226..1452480 Rahnella sp. Y9602 10212334 YP_004212084.1 CDS Rahaq_1334 NC_015061.1 1452477 1453691 R manually curated; TIGRFAM: sugar efflux transporter; KEGG: spe:Spro_3234 sugar efflux transporter; PFAM: major facilitator superfamily MFS_1; sugar efflux transporter complement(1452477..1453691) Rahnella sp. Y9602 10212335 YP_004212085.1 CDS Rahaq_1335 NC_015061.1 1454155 1455285 D KEGG: spe:Spro_3230 bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphoryl transfer system HPr; HPr family phosphocarrier protein 1454155..1455285 Rahnella sp. Y9602 10212336 YP_004212086.1 CDS Rahaq_1336 NC_015061.1 1455282 1456217 D KEGG: spe:Spro_3229 1-phosphofructokinase; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; 1-phosphofructokinase 1455282..1456217 Rahnella sp. Y9602 10212337 YP_004212087.1 CDS Rahaq_1337 NC_015061.1 1456233 1457933 D TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose-specific, IIB subunnit; KEGG: yen:YE1449 PTS system fructose-specific transporter subunits IIBC; PFAM: phosphotransferase system EIIC; PTS system fructose subfamily transporter subunit IIC 1456233..1457933 Rahnella sp. Y9602 10212338 YP_004212088.1 CDS Rahaq_1338 NC_015061.1 1458040 1458906 R SMART: AP endonuclease family 2; TIGRFAM: apurinic endonuclease Apn1; KEGG: ebi:EbC_29990 endodeoxyribonuclease IV; PFAM: Xylose isomerase domain-containing protein TIM barrel; apurinic endonuclease Apn1 complement(1458040..1458906) Rahnella sp. Y9602 10212339 YP_004212089.1 CDS Rahaq_1339 NC_015061.1 1458997 1460103 R PFAM: Uncharacterised protein family UPF0324; KEGG: ypb:YPTS_1433 hypothetical protein; hypothetical protein complement(1458997..1460103) Rahnella sp. Y9602 10212340 YP_004212090.1 CDS Rahaq_1340 NC_015061.1 1460292 1461164 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3225 DNA-binding transcriptional regulator; LysR family transcriptional regulator 1460292..1461164 Rahnella sp. Y9602 10212341 YP_004212091.1 CDS Rahaq_1341 NC_015061.1 1461296 1462771 D PFAM: amino acid permease-associated region; KEGG: spe:Spro_3224 lysine transporter; amino acid permease 1461296..1462771 Rahnella sp. Y9602 10212342 YP_004212092.1 CDS Rahaq_1342 NC_015061.1 1463005 1464087 D PFAM: transport system permease protein; KEGG: ypb:YPTS_1438 transport system permease protein; transport system permease 1463005..1464087 Rahnella sp. Y9602 10212343 YP_004212093.1 CDS Rahaq_1343 NC_015061.1 1464087 1464926 D KEGG: spe:Spro_3221 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1464087..1464926 Rahnella sp. Y9602 10212344 YP_004212094.1 CDS Rahaq_1344 NC_015061.1 1465120 1465926 R KEGG: ebi:EbC_05260 phytase; TIGRFAM: 5'-nucleotidase, lipoprotein e(P4) family; PFAM: acid phosphatase (Class B); 5'-nucleotidase complement(1465120..1465926) Rahnella sp. Y9602 10212345 YP_004212095.1 CDS Rahaq_1345 NC_015061.1 1466130 1467239 R PFAM: porin Gram-negative type; KEGG: esa:ESA_03112 hypothetical protein; porin complement(1466130..1467239) Rahnella sp. Y9602 10212346 YP_004212096.1 CDS Rahaq_1346 NC_015061.1 1467565 1469739 D SMART: helicase c2; DEAD-like helicase; KEGG: spe:Spro_1461 ATP-dependent DNA helicase DinG; helicase c2 1467565..1469739 Rahnella sp. Y9602 10212347 YP_004212097.1 CDS Rahaq_1347 NC_015061.1 1469785 1470747 D PFAM: Glycosyl transferase, family 3-like; KEGG: eca:ECA2772 glycosyl transferase family protein; glycosyl transferase family protein 1469785..1470747 Rahnella sp. Y9602 10212348 YP_004212098.1 CDS Rahaq_1348 NC_015061.1 1471069 1471410 D manually curated; TIGRFAM: alkylphosphonate utilization operon protein PhnA; KEGG: ddc:Dd586_0970 alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; alkylphosphonate utilization protein PhnA 1471069..1471410 Rahnella sp. Y9602 10212349 YP_004212099.1 CDS Rahaq_1349 NC_015061.1 1471523 1473385 D PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: pct:PC1_1581 peptidase M3A and M3B thimet/oligopeptidase F; peptidase M3A and M3B thimet/oligopeptidase F 1471523..1473385 Rahnella sp. Y9602 10212350 YP_004212100.1 CDS Rahaq_1350 NC_015061.1 1473471 1474100 R PFAM: flavin reductase domain protein FMN-binding; KEGG: sbn:Sbal195_3989 flavoprotein oxygenase; flavin reductase domain-containing FMN-binding protein complement(1473471..1474100) Rahnella sp. Y9602 10212351 YP_004212101.1 CDS Rahaq_1351 NC_015061.1 1474307 1475275 D KEGG: spe:Spro_1470 SAM-dependent methyltransferase; PFAM: protein of unknown function DUF890; rRNA (adenine-N(6)-)-methyltransferase 1474307..1475275 Rahnella sp. Y9602 10212352 YP_004212102.1 CDS Rahaq_1352 NC_015061.1 1475618 1476928 D TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: ypz:YPZ3_2157 chemotactic transducer; SMART: PAC repeat-containing protein; PAS domain containing protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 1475618..1476928 Rahnella sp. Y9602 10212353 YP_004212103.1 CDS Rahaq_1353 NC_015061.1 1477632 1477871 D KEGG: pct:PC1_3272 hypothetical protein; hypothetical protein 1477632..1477871 Rahnella sp. Y9602 10212354 YP_004212104.1 CDS Rahaq_1354 NC_015061.1 1478229 1478951 R KEGG: pwa:Pecwa_2880 glutamine ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(1478229..1478951) Rahnella sp. Y9602 10212355 YP_004212105.1 CDS Rahaq_1355 NC_015061.1 1478948 1479607 R KEGG: yen:YE2846 glutamine ABC transporter permease protein; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit complement(1478948..1479607) Rahnella sp. Y9602 10212356 YP_004212106.1 CDS Rahaq_1356 NC_015061.1 1479716 1480459 R TIGRFAM: cationic amino acid ABC transporter periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: set:SEN0775 glutamine ABC transporter periplasmic protein; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; cationic amino acid ABC transporter periplasmic binding protein complement(1479716..1480459) Rahnella sp. Y9602 10212357 YP_004212107.1 CDS Rahaq_1357 NC_015061.1 1480861 1481127 R KEGG: spe:Spro_1480 hypothetical protein; TraR/DksA family transcriptional regulator complement(1480861..1481127) Rahnella sp. Y9602 10212358 YP_004212108.1 CDS Rahaq_1358 NC_015061.1 1481550 1482713 D KEGG: ebr:ECB_02815 capsule polysaccharide export inner-membrane protein KpsE; capsule polysaccharide export inner-membrane protein KpsE 1481550..1482713 Rahnella sp. Y9602 10212359 YP_004212109.1 CDS Rahaq_1359 NC_015061.1 1482768 1484444 D PFAM: polysaccharide export protein; KEGG: ecq:ECED1_3595 polysialic acid transport protein precursor; polysaccharide export protein 1482768..1484444 Rahnella sp. Y9602 10212360 YP_004212110.1 CDS Rahaq_1360 NC_015061.1 1484444 1486483 D PFAM: Capsule polysaccharide biosynthesis protein; KEGG: ecc:c3690 KpsC protein; capsular polysaccharide biosynthesis protein 1484444..1486483 Rahnella sp. Y9602 10212361 YP_004212111.1 CDS Rahaq_1361 NC_015061.1 1486531 1487802 D PFAM: Capsule polysaccharide biosynthesis protein; KEGG: ecz:ECS88_3326 capsule polysaccharide export protein; capsular polysaccharide biosynthesis protein 1486531..1487802 Rahnella sp. Y9602 10212362 YP_004212112.1 CDS Rahaq_1362 NC_015061.1 1487841 1488833 D SMART: Parallel beta-helix repeat; KEGG: rme:Rmet_5725 hypothetical protein; Parallel beta-helix repeat 1487841..1488833 Rahnella sp. Y9602 10212363 YP_004212113.1 CDS Rahaq_1363 NC_015061.1 1488863 1490083 D KEGG: ctu:Ctu_06110 hypothetical protein; hypothetical protein 1488863..1490083 Rahnella sp. Y9602 10212364 YP_004212114.1 CDS Rahaq_1364 NC_015061.1 1490125 1491813 R KEGG: sna:Snas_5672 UDP-N-acetylglucosamine--lysosomal-enzyme N-acetylglucosamine phosphotransferase; UDP-N-acetylglucosamine--lysosomal-enzymeN- acetylglucosaminephosphotransferase complement(1490125..1491813) Rahnella sp. Y9602 10212365 YP_004212115.1 CDS Rahaq_1365 NC_015061.1 1491761 1492873 R PFAM: glycosyl transferase group 1; KEGG: ttu:TERTU_0695 glycosyltransferase family 4 domain protein; group 1 glycosyl transferase complement(1491761..1492873) Rahnella sp. Y9602 10212366 YP_004212116.1 CDS Rahaq_1366 NC_015061.1 1492936 1494027 R KEGG: ctu:Ctu_06090 capsular polysaccharide phosphotransferase LcbA; capsular polysaccharide phosphotransferase LcbA complement(1492936..1494027) Rahnella sp. Y9602 10212367 YP_004212117.1 CDS Rahaq_1367 NC_015061.1 1494135 1494800 R KEGG: ecc:c3697 KpsT protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(1494135..1494800) Rahnella sp. Y9602 10212368 YP_004212118.1 CDS Rahaq_1368 NC_015061.1 1494797 1495573 R PFAM: ABC transporter; KEGG: eum:ECUMN_3434 polysialic acid transport protein; ABC transporter complement(1494797..1495573) Rahnella sp. Y9602 10212369 YP_004212119.1 CDS Rahaq_1369 NC_015061.1 1496196 1496699 R PFAM: Ferritin Dps family protein; KEGG: spe:Spro_1481 DNA starvation/stationary phase protection protein Dps; ferritin Dps family protein complement(1496196..1496699) Rahnella sp. Y9602 10212370 YP_004212120.1 CDS Rahaq_1370 NC_015061.1 1497114 1497791 R PFAM: Anti-sigma K factor RskA; KEGG: yen:YE2841 hypothetical protein; anti-sigma K factor RskA complement(1497114..1497791) Rahnella sp. Y9602 10212371 YP_004212121.1 CDS Rahaq_1371 NC_015061.1 1497788 1498369 R KEGG: yen:YE2840 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(1497788..1498369) Rahnella sp. Y9602 10212372 YP_004212122.1 CDS Rahaq_1372 NC_015061.1 1498435 1498998 R KEGG: yen:YE2839 hypothetical protein; PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin; beta-Ig-H3/fasciclin complement(1498435..1498998) Rahnella sp. Y9602 10212373 YP_004212123.1 CDS Rahaq_1373 NC_015061.1 1499093 1499248 D hypothetical protein 1499093..1499248 Rahnella sp. Y9602 10212374 YP_004212124.1 CDS Rahaq_1374 NC_015061.1 1499174 1500160 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: cko:CKO_02307 threonine and homoserine efflux system; hypothetical protein complement(1499174..1500160) Rahnella sp. Y9602 10212375 YP_004212125.1 CDS Rahaq_1375 NC_015061.1 1500560 1501093 D PFAM: virulence-related outer membrane protein; KEGG: cko:CKO_02304 outer membrane protein X; virulence-related outer membrane protein 1500560..1501093 Rahnella sp. Y9602 10212376 YP_004212126.1 CDS Rahaq_1376 NC_015061.1 1501175 1501939 R PFAM: oxidoreductase molybdopterin binding; KEGG: ebi:EbC_44120 oxidoreductase, molybdopterin binding; oxidoreductase molybdopterin binding protein complement(1501175..1501939) Rahnella sp. Y9602 10212377 YP_004212127.1 CDS Rahaq_1377 NC_015061.1 1501932 1502573 R KEGG: ebi:EbC_44130 conserved uncharacterized protein; hypothetical protein complement(1501932..1502573) Rahnella sp. Y9602 10212378 YP_004212128.1 CDS Rahaq_1378 NC_015061.1 1502600 1503223 R KEGG: ebi:EbC_44140 hypothetical protein; hypothetical protein complement(1502600..1503223) Rahnella sp. Y9602 10212379 YP_004212129.1 CDS Rahaq_1379 NC_015061.1 1503437 1504111 D TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; KEGG: ddd:Dda3937_00228 DNA-binding heavy metal response regulator; SMART: response regulator receiver; two component heavy metal response transcriptional regulator, winged helix family 1503437..1504111 Rahnella sp. Y9602 10212380 YP_004212130.1 CDS Rahaq_1380 NC_015061.1 1504143 1505540 D TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: spe:Spro_1499 heavy metal sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; heavy metal sensor signal transduction histidine kinase 1504143..1505540 Rahnella sp. Y9602 10212381 YP_004212131.1 CDS Rahaq_1381 NC_015061.1 1505773 1507449 D PFAM: sulfatase; KEGG: spe:Spro_1859 phosphoethanolamine transferase; sulfatase 1505773..1507449 Rahnella sp. Y9602 10212382 YP_004212132.1 CDS Rahaq_1382 NC_015061.1 1507591 1508703 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: spe:Spro_3057 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 1507591..1508703 Rahnella sp. Y9602 10212383 YP_004212133.1 CDS Rahaq_1383 NC_015061.1 1508706 1509620 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pfo:Pfl01_2358 LysR family transcriptional regulator; LysR family transcriptional regulator 1508706..1509620 Rahnella sp. Y9602 10212384 YP_004212134.1 CDS Rahaq_1384 NC_015061.1 1509627 1510235 R KEGG: avn:Avin_09800 3-isopropylmalate dehydratase small subunit LeuD2; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain-containing protein; 3-isopropylmalate dehydratase small subunit complement(1509627..1510235) Rahnella sp. Y9602 10212385 YP_004212135.1 CDS Rahaq_1385 NC_015061.1 1510245 1511651 R KEGG: avn:Avin_09810 isopropylmalate isomerase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain-containing protein; 3-isopropylmalate dehydratase large subunit complement(1510245..1511651) Rahnella sp. Y9602 10212386 YP_004212136.1 CDS Rahaq_1386 NC_015061.1 1511822 1512697 D PFAM: alpha/beta hydrolase fold; KEGG: avn:Avin_09470 alpha/beta hydrolase fold protein; alpha/beta hydrolase 1511822..1512697 Rahnella sp. Y9602 10212387 YP_004212137.1 CDS Rahaq_1387 NC_015061.1 1512752 1514806 R KEGG: spe:Spro_1512 choline transport protein BetT; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; choline/carnitine/betaine transporter complement(1512752..1514806) Rahnella sp. Y9602 10212388 YP_004212138.1 CDS Rahaq_1388 NC_015061.1 1515043 1515642 D KEGG: ypb:YPTS_1277 transcriptional regulator BetI; TIGRFAM: transcriptional repressor BetI; PFAM: regulatory protein TetR; BetI family transcriptional regulator 1515043..1515642 Rahnella sp. Y9602 10212389 YP_004212139.1 CDS Rahaq_1389 NC_015061.1 1515687 1517156 D KEGG: spe:Spro_1514 betaine aldehyde dehydrogenase; TIGRFAM: betaine aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; betaine aldehyde dehydrogenase 1515687..1517156 Rahnella sp. Y9602 10212390 YP_004212140.1 CDS Rahaq_1390 NC_015061.1 1517180 1518865 D KEGG: spe:Spro_1515 choline dehydrogenase; TIGRFAM: choline dehydrogenase; PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; choline dehydrogenase 1517180..1518865 Rahnella sp. Y9602 10212391 YP_004212141.1 CDS Rahaq_1391 NC_015061.1 1518956 1519414 D PFAM: GCN5-related N-acetyltransferase; KEGG: kpu:KP1_3906 transferase; N-acetyltransferase GCN5 1518956..1519414 Rahnella sp. Y9602 10212392 YP_004212142.1 CDS Rahaq_1392 NC_015061.1 1519602 1520534 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pfl:PFL_2263 LysR substrate binding domain-containing protein; LysR family transcriptional regulator complement(1519602..1520534) Rahnella sp. Y9602 10212393 YP_004212143.1 CDS Rahaq_1393 NC_015061.1 1520636 1521070 D PFAM: protein of unknown function DUF606; KEGG: enc:ECL_02097 hypothetical protein; hypothetical protein 1520636..1521070 Rahnella sp. Y9602 10212394 YP_004212144.1 CDS Rahaq_1394 NC_015061.1 1521074 1521526 D PFAM: protein of unknown function DUF606; KEGG: esa:ESA_02965 hypothetical protein; hypothetical protein 1521074..1521526 Rahnella sp. Y9602 10212395 YP_004212145.1 CDS Rahaq_1395 NC_015061.1 1521554 1522012 R PFAM: RES domain protein; KEGG: ypi:YpsIP31758_1792 hypothetical protein; RES domain-containing protein complement(1521554..1522012) Rahnella sp. Y9602 10212396 YP_004212146.1 CDS Rahaq_1396 NC_015061.1 1522009 1522470 R KEGG: yen:YE2115 hypothetical protein; hypothetical protein complement(1522009..1522470) Rahnella sp. Y9602 10212397 YP_004212147.1 CDS Rahaq_1397 NC_015061.1 1522821 1523708 D KEGG: enc:ECL_01169 nucleoside-specific channel-forming protein Tsx; manually curated; PFAM: Nucleoside-specific channel-forming protein, Tsx-like; Nucleoside-specific channel-forming protein, Tsx-like protein 1522821..1523708 Rahnella sp. Y9602 10212398 YP_004212148.1 CDS Rahaq_1398 NC_015061.1 1523895 1525490 D KEGG: spe:Spro_1545 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1523895..1525490 Rahnella sp. Y9602 10212399 YP_004212149.1 CDS Rahaq_1399 NC_015061.1 1525684 1526445 R KEGG: spe:Spro_1546 molybdopterin biosynthesis protein MoeB; TIGRFAM: molybdopterin synthase sulfurylase MoeB; PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; molybdopterin synthase sulfurylase MoeB complement(1525684..1526445) Rahnella sp. Y9602 10212400 YP_004212150.1 CDS Rahaq_1400 NC_015061.1 1526448 1527689 R KEGG: spe:Spro_1547 molybdopterin biosynthesis protein MoeA; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV; molybdenum cofactor synthesis domain-containing protein complement(1526448..1527689) Rahnella sp. Y9602 10212401 YP_004212151.1 CDS Rahaq_1401 NC_015061.1 1527935 1528168 D KEGG: etr:ETAE_0287 L-fucose operon activator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator 1527935..1528168 Rahnella sp. Y9602 10212402 YP_004212152.1 CDS Rahaq_1402 NC_015061.1 1528285 1529289 D PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ddd:Dda3937_00500 ISEch4 transposase; transposase IS116/IS110/IS902 family protein 1528285..1529289 Rahnella sp. Y9602 10212403 YP_004212153.1 CDS Rahaq_1403 NC_015061.1 1529596 1532547 R KEGG: yen:YE4059 autotransporter protein; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; Pertactin; outer membrane autotransporter barrel domain-containing protein complement(1529596..1532547) Rahnella sp. Y9602 10212404 YP_004212154.1 CDS Rahaq_1404 NC_015061.1 1532818 1534017 R PFAM: major facilitator superfamily MFS_1; KEGG: etr:ETAE_2780 hypothetical protein; major facilitator superfamily protein complement(1532818..1534017) Rahnella sp. Y9602 10212405 YP_004212155.1 CDS Rahaq_1405 NC_015061.1 1534295 1535299 D KEGG: ebi:EbC_14450 L-asparaginase; PFAM: peptidase T2 asparaginase 2; Beta-aspartyl-peptidase 1534295..1535299 Rahnella sp. Y9602 10212406 YP_004212156.1 CDS Rahaq_1406 NC_015061.1 1535296 1537164 D KEGG: ebi:EbC_14460 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter 1535296..1537164 Rahnella sp. Y9602 10212407 YP_004212157.1 CDS Rahaq_1407 NC_015061.1 1537237 1538793 D PFAM: extracellular solute-binding protein family 5; KEGG: spe:Spro_1551 extracellular solute-binding protein; family 5 extracellular solute-binding protein 1537237..1538793 Rahnella sp. Y9602 10212408 YP_004212158.1 CDS Rahaq_1408 NC_015061.1 1538902 1539822 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_1552 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1538902..1539822 Rahnella sp. Y9602 10212409 YP_004212159.1 CDS Rahaq_1409 NC_015061.1 1539831 1540751 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_1553 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1539831..1540751 Rahnella sp. Y9602 10212410 YP_004212160.1 CDS Rahaq_1410 NC_015061.1 1540815 1541672 R TIGRFAM: S-formylglutathione hydrolase; KEGG: spe:Spro_1556 S-formylglutathione hydrolase; PFAM: esterase; S-formylglutathione hydrolase complement(1540815..1541672) Rahnella sp. Y9602 10212411 YP_004212161.1 CDS Rahaq_1411 NC_015061.1 1541684 1542808 R KEGG: spe:Spro_1557 S-(hydroxymethyl)glutathione dehydrogenase; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase complement(1541684..1542808) Rahnella sp. Y9602 10212412 YP_004212162.1 CDS Rahaq_1412 NC_015061.1 1542852 1543781 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_1558 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1542852..1543781) Rahnella sp. Y9602 10212413 YP_004212163.1 CDS Rahaq_1413 NC_015061.1 1543980 1545107 D KEGG: yen:YE2819 hypothetical protein; hypothetical protein 1543980..1545107 Rahnella sp. Y9602 10212414 YP_004212164.1 CDS Rahaq_1414 NC_015061.1 1545233 1545898 D TIGRFAM: GTP cyclohydrolase I; KEGG: pwa:Pecwa_1941 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; GTP cyclohydrolase I 1545233..1545898 Rahnella sp. Y9602 10212415 YP_004212165.1 CDS Rahaq_1415 NC_015061.1 1546074 1547228 D PFAM: protein of unknown function DUF418; KEGG: yen:YE2817 hypothetical protein; hypothetical protein 1546074..1547228 Rahnella sp. Y9602 10212416 YP_004212166.1 CDS Rahaq_1416 NC_015061.1 1547396 1547515 D hypothetical protein 1547396..1547515 Rahnella sp. Y9602 10212417 YP_004212167.1 CDS Rahaq_1417 NC_015061.1 1547499 1548530 D KEGG: spe:Spro_1562 DNA-binding transcriptional regulator GalS; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator 1547499..1548530 Rahnella sp. Y9602 10212418 YP_004212168.1 CDS Rahaq_1418 NC_015061.1 1548781 1549779 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE2815 galactose-binding protein; LacI family transcriptional regulator 1548781..1549779 Rahnella sp. Y9602 10212419 YP_004212169.1 CDS Rahaq_1419 NC_015061.1 1550006 1551538 D KEGG: yen:YE2814 galactose/methyl galaxtoside transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1550006..1551538 Rahnella sp. Y9602 10212420 YP_004212170.1 CDS Rahaq_1420 NC_015061.1 1551557 1552567 D PFAM: inner-membrane translocator; KEGG: yen:YE2813 beta-methylgalactoside transporter inner membrane component; inner-membrane translocator 1551557..1552567 Rahnella sp. Y9602 10212421 YP_004212171.1 CDS Rahaq_1421 NC_015061.1 1552707 1553630 R PFAM: protein of unknown function DUF218; KEGG: spe:Spro_1566 hypothetical protein; hypothetical protein complement(1552707..1553630) Rahnella sp. Y9602 10212422 YP_004212172.1 CDS Rahaq_1422 NC_015061.1 1553857 1555554 R PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: spe:Spro_1567 malate dehydrogenase; malic protein NAD-binding protein complement(1553857..1555554) Rahnella sp. Y9602 10212423 YP_004212173.1 CDS Rahaq_1423 NC_015061.1 1555713 1556603 R TIGRFAM: cytidine deaminase; KEGG: spe:Spro_1568 cytidine deaminase; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding domain protein; CMP/dCMP deaminase zinc-binding; cytidine deaminase complement(1555713..1556603) Rahnella sp. Y9602 10212424 YP_004212174.1 CDS Rahaq_1424 NC_015061.1 1556771 1557505 R TIGRFAM: cationic amino acid ABC transporter periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: ddc:Dd586_2318 cationic amino acid ABC transporter periplasmic binding protein; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; cationic amino acid ABC transporter periplasmic binding protein complement(1556771..1557505) Rahnella sp. Y9602 10212425 YP_004212175.1 CDS Rahaq_1425 NC_015061.1 1557733 1558401 R KEGG: ypy:YPK_2713 arginine transporter permease subunit ArtM; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit complement(1557733..1558401) Rahnella sp. Y9602 10212426 YP_004212176.1 CDS Rahaq_1426 NC_015061.1 1558401 1559117 R KEGG: spe:Spro_1654 arginine transporter permease subunit ArtQ; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit complement(1558401..1559117) Rahnella sp. Y9602 10212427 YP_004212177.1 CDS Rahaq_1427 NC_015061.1 1559130 1559861 R TIGRFAM: cationic amino acid ABC transporter periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: yen:YE1495 arginine-binding periplasmic protein 1 precursor; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; cationic amino acid ABC transporter periplasmic binding protein complement(1559130..1559861) Rahnella sp. Y9602 10212428 YP_004212178.1 CDS Rahaq_1428 NC_015061.1 1559909 1560658 R KEGG: ypy:YPK_2710 arginine transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(1559909..1560658) Rahnella sp. Y9602 10212429 YP_004212179.1 CDS Rahaq_1429 NC_015061.1 1560848 1561429 R KEGG: spe:Spro_1657 lipoprotein; lipoprotein complement(1560848..1561429) Rahnella sp. Y9602 10212430 YP_004212180.1 CDS Rahaq_1430 NC_015061.1 1561617 1561943 D PFAM: protein of unknown function DUF74; KEGG: spe:Spro_1658 hypothetical protein; hypothetical protein 1561617..1561943 Rahnella sp. Y9602 10212431 YP_004212181.1 CDS Rahaq_1431 NC_015061.1 1561940 1562788 D KEGG: spe:Spro_1659 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 1561940..1562788 Rahnella sp. Y9602 10212432 YP_004212182.1 CDS Rahaq_1432 NC_015061.1 1562811 1563845 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: yen:YE1503 hypothetical protein; NAD-dependent epimerase/dehydratase complement(1562811..1563845) Rahnella sp. Y9602 10212433 YP_004212183.1 CDS Rahaq_1433 NC_015061.1 1564002 1565456 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: spe:Spro_1661 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(1564002..1565456) Rahnella sp. Y9602 10212434 YP_004212184.1 CDS Rahaq_1434 NC_015061.1 1565539 1566552 R KEGG: yen:YE1505 L-threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; threonine aldolase complement(1565539..1566552) Rahnella sp. Y9602 10212435 YP_004212185.1 CDS Rahaq_1435 NC_015061.1 1566630 1568351 R PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; KEGG: spe:Spro_1664 pyruvate dehydrogenase; thiamine pyrophosphate TPP-binding domain-containing protein complement(1566630..1568351) Rahnella sp. Y9602 10212436 YP_004212186.1 CDS Rahaq_1436 NC_015061.1 1568647 1569660 R PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: dda:Dd703_2272 HCP oxidoreductase, NADH-dependent; ferredoxin complement(1568647..1569660) Rahnella sp. Y9602 10212437 YP_004212187.1 CDS Rahaq_1437 NC_015061.1 1569667 1571319 R KEGG: ddd:Dda3937_02367 hybrid cluster protein [4Fe-2S-2O] protein in anaerobic terminal reductases; TIGRFAM: hybrid cluster protein; PFAM: Prismane; hybrid cluster protein complement(1569667..1571319) Rahnella sp. Y9602 10212438 YP_004212188.1 CDS Rahaq_1438 NC_015061.1 1571486 1572385 R PFAM: protein of unknown function DUF340 membrane; KEGG: yen:YE1511 hypothetical protein; hypothetical protein complement(1571486..1572385) Rahnella sp. Y9602 10212439 YP_004212189.1 CDS Rahaq_1439 NC_015061.1 1572575 1574308 D KEGG: spe:Spro_1668 hypothetical protein; hypothetical protein 1572575..1574308 Rahnella sp. Y9602 10212440 YP_004212190.1 CDS Rahaq_1440 NC_015061.1 1574305 1575294 R PFAM: protein of unknown function DUF535; KEGG: spe:Spro_1669 hypothetical protein; hypothetical protein complement(1574305..1575294) Rahnella sp. Y9602 10212441 YP_004212191.1 CDS Rahaq_1441 NC_015061.1 1575587 1575808 R TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein DNA-binding; KEGG: spe:Spro_1672 cold-shock DNA-binding domain-containing protein; SMART: Cold shock protein; cold-shock protein complement(1575587..1575808) Rahnella sp. Y9602 10212442 YP_004212192.1 CDS Rahaq_1442 NC_015061.1 1576202 1576522 D PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: spe:Spro_1673 ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS 1576202..1576522 Rahnella sp. Y9602 10212443 YP_004212193.1 CDS Rahaq_1443 NC_015061.1 1576550 1578832 D TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: ATPase AAA-2 domain protein; AAA ATPase; Clp domain protein; Clp ATPase-like; KEGG: spe:Spro_1674 ATP-dependent Clp protease ATP-binding subunit; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding protein ClpA 1576550..1578832 Rahnella sp. Y9602 10212444 YP_004212194.1 CDS Rahaq_1444 NC_015061.1 1579054 1579272 R KEGG: pam:PANA_1335 InfA; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein; translation initiation factor IF-1 complement(1579054..1579272) Rahnella sp. Y9602 10212445 YP_004212195.1 CDS Rahaq_1445 NC_015061.1 1579366 1580100 R TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; KEGG: spe:Spro_1676 leucyl/phenylalanyl-tRNA--protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase; leucyl/phenylalanyl-tRNA/protein transferase complement(1579366..1580100) Rahnella sp. Y9602 10212446 YP_004212196.1 CDS Rahaq_1446 NC_015061.1 1580152 1581876 R TIGRFAM: ABC transporter CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; KEGG: spe:Spro_1677 cysteine/glutathione ABC transporter membrane/ATP-binding component; SMART: AAA ATPase; cysteine ABC transporter permease/ATP-binding protein complement(1580152..1581876) Rahnella sp. Y9602 10212447 YP_004212197.1 CDS Rahaq_1447 NC_015061.1 1581876 1583642 R SMART: AAA ATPase; manually curated; KEGG: spe:Spro_1678 cysteine/glutathione ABC transporter membrane/ATP-binding component; TIGRFAM: ABC transporter CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; cysteine ABC transporter permease/ATP-binding protein complement(1581876..1583642) Rahnella sp. Y9602 10212448 YP_004212198.1 CDS Rahaq_1448 NC_015061.1 1583791 1584759 R KEGG: ent:Ent638_1412 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase complement(1583791..1584759) Rahnella sp. Y9602 10212449 YP_004212199.1 CDS Rahaq_1450 NC_015061.1 1585492 1585986 D KEGG: dze:Dd1591_2361 leucine-responsive transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 1585492..1585986 Rahnella sp. Y9602 10212451 YP_004212200.1 CDS Rahaq_1451 NC_015061.1 1586107 1589553 D PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: spe:Spro_1683 cell division protein FtsK/SpoIIIE; cell division protein FtsK 1586107..1589553 Rahnella sp. Y9602 10212452 YP_004212201.1 CDS Rahaq_1452 NC_015061.1 1589748 1590359 D KEGG: yen:YE1526 outer-membrane lipoprotein carrier protein; TIGRFAM: outer membrane lipoprotein carrier protein LolA; PFAM: outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA 1589748..1590359 Rahnella sp. Y9602 10212453 YP_004212202.1 CDS Rahaq_1453 NC_015061.1 1590367 1591710 D KEGG: spe:Spro_1685 recombination factor protein RarA; PFAM: AAA ATPase; SMART: AAA ATPase; ATPase AAA 1590367..1591710 Rahnella sp. Y9602 10212454 YP_004212203.1 CDS Rahaq_1454 NC_015061.1 1591817 1593109 D KEGG: yen:YE1528 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; seryl-tRNA synthetase 1591817..1593109 Rahnella sp. Y9602 10212455 YP_004212204.1 CDS Rahaq_1455 NC_015061.1 1593309 1595765 D KEGG: spe:Spro_1687 anaerobic dimethyl sulfoxide reductase subunit A; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; anaerobic dimethyl sulfoxide reductase subunit A 1593309..1595765 Rahnella sp. Y9602 10212456 YP_004212205.1 CDS Rahaq_1456 NC_015061.1 1595842 1598289 D KEGG: ecp:ECP_0908 anaerobic dimethyl sulfoxide reductase chain A precursor; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; Twin-arginine translocation pathway, signal sequence, subgroup; molydopterin dinucleotide-binding region; anaerobic dimethyl sulfoxide reductase subunit A 1595842..1598289 Rahnella sp. Y9602 10212457 YP_004212206.1 CDS Rahaq_1457 NC_015061.1 1598301 1598918 D TIGRFAM: dimethylsulfoxide reductase, chain B; KEGG: ctu:Ctu_22110 anaerobic dimethyl sulfoxide reductase chain B; dimethylsulfoxide reductase subunit B 1598301..1598918 Rahnella sp. Y9602 10212458 YP_004212207.1 CDS Rahaq_1458 NC_015061.1 1598920 1599777 D PFAM: DMSO reductase anchor subunit (DmsC); KEGG: yps:YPTB0807 anaerobic dimethyl sulfoxide reductase, subunit C; DMSO reductase anchor subunit DmsC 1598920..1599777 Rahnella sp. Y9602 10212459 YP_004212208.1 CDS Rahaq_1459 NC_015061.1 1599847 1600455 D KEGG: dda:Dd703_2252 cytoplasmic chaperone TorD family protein; cytoplasmic chaperone TorD family protein 1599847..1600455 Rahnella sp. Y9602 10212460 YP_004212209.1 CDS Rahaq_1460 NC_015061.1 1600455 1601027 D KEGG: etr:ETAE_2190 hypothetical protein; hypothetical protein 1600455..1601027 Rahnella sp. Y9602 10212461 YP_004212210.1 CDS Rahaq_1461 NC_015061.1 1601161 1602306 D PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE1530 MFS family transporter protein; major facilitator superfamily protein 1601161..1602306 Rahnella sp. Y9602 10212462 YP_004212211.1 CDS Rahaq_1462 NC_015061.1 1602412 1603209 R TIGRFAM: pyruvate formate-lyase activating enzyme; KEGG: sea:SeAg_B0975 pyruvate formate lyase-activating enzyme 1; PFAM: Radical SAM domain protein; pyruvate formate-lyase activating enzyme complement(1602412..1603209) Rahnella sp. Y9602 10212463 YP_004212212.1 CDS Rahaq_1463 NC_015061.1 1603250 1604236 R PFAM: integrase family protein; KEGG: eca:ECA2637 phage integrase; integrase family protein complement(1603250..1604236) Rahnella sp. Y9602 10212464 YP_004212213.1 CDS Rahaq_1464 NC_015061.1 1604339 1604638 R KEGG: pmr:PMI2006 phage repressor protein C; phage repressor protein C complement(1604339..1604638) Rahnella sp. Y9602 10212465 YP_004212214.1 CDS Rahaq_1465 NC_015061.1 1604745 1605119 D PFAM: Regulatory phage protein Cox; KEGG: eca:ECA2635 phage regulatory protein; Regulatory phage protein Cox 1604745..1605119 Rahnella sp. Y9602 10212466 YP_004212215.1 CDS Rahaq_1466 NC_015061.1 1605298 1605798 D KEGG: ecz:ECS88_2224 replication gene B protein (GpB); replication protein B protein (GpB) 1605298..1605798 Rahnella sp. Y9602 10212467 YP_004212216.1 CDS Rahaq_1467 NC_015061.1 1605858 1606100 D KEGG: pct:PC1_3160 hypothetical protein; hypothetical protein 1605858..1606100 Rahnella sp. Y9602 10212468 YP_004212217.1 CDS Rahaq_1468 NC_015061.1 1606100 1606318 D TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; KEGG: pct:PC1_3162 transcriptional regulator, TraR/DksA family; phage/conjugal plasmid C-4 type zinc finger protein, TraR family 1606100..1606318 Rahnella sp. Y9602 10212469 YP_004212218.1 CDS Rahaq_1469 NC_015061.1 1606321 1606599 D KEGG: ypy:YPK_0890 relication initiation protein; relication initiation protein 1606321..1606599 Rahnella sp. Y9602 10212470 YP_004212219.1 CDS Rahaq_1470 NC_015061.1 1606607 1608889 D PFAM: replication gene A; KEGG: pct:PC1_3164 replication protein A; replication protein A 1606607..1608889 Rahnella sp. Y9602 10212471 YP_004212220.1 CDS Rahaq_1471 NC_015061.1 1609202 1610293 D KEGG: oan:Oant_1158 hypothetical protein; hypothetical protein 1609202..1610293 Rahnella sp. Y9602 10212472 YP_004212221.1 CDS Rahaq_1472 NC_015061.1 1610290 1611528 D KEGG: bch:Bcen2424_0193 hypothetical protein; hypothetical protein 1610290..1611528 Rahnella sp. Y9602 10212473 YP_004212222.1 CDS Rahaq_1473 NC_015061.1 1611525 1612163 D KEGG: sek:SSPA2407 hypothetical protein; hypothetical protein 1611525..1612163 Rahnella sp. Y9602 10212474 YP_004212223.1 CDS Rahaq_1474 NC_015061.1 1612307 1612468 R hypothetical protein complement(1612307..1612468) Rahnella sp. Y9602 10212475 YP_004212224.1 CDS Rahaq_1475 NC_015061.1 1613298 1615835 D PFAM: AAA-4 family protein; KEGG: spl:Spea_1171 transcriptional regulator; ATPase AAA 1613298..1615835 Rahnella sp. Y9602 10212476 YP_004212225.1 CDS Rahaq_1476 NC_015061.1 1615911 1616942 R KEGG: yps:YPTB1764 capsid portal protein; TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein; phage portal protein, PBSX family complement(1615911..1616942) Rahnella sp. Y9602 10212477 YP_004212226.1 CDS Rahaq_1477 NC_015061.1 1616945 1618711 R KEGG: ctu:Ctu_32400 terminase, ATPase subunit; terminase, ATPase subunit complement(1616945..1618711) Rahnella sp. Y9602 10212478 YP_004212227.1 CDS Rahaq_1478 NC_015061.1 1618856 1619707 D PFAM: capsid scaffolding; KEGG: yps:YPTB1858 V protein phage 186; capsid scaffolding 1618856..1619707 Rahnella sp. Y9602 10212479 YP_004212228.1 CDS Rahaq_1479 NC_015061.1 1619756 1620820 D KEGG: ent:Ent638_3499 P2 family phage major capsid protein; TIGRFAM: phage major capsid protein, P2 family; PFAM: major capsid protein P2; phage major capsid protein, P2 family 1619756..1620820 Rahnella sp. Y9602 10212480 YP_004212229.1 CDS Rahaq_1480 NC_015061.1 1620832 1621488 D PFAM: small terminase subunit; KEGG: pct:PC1_3174 small terminase subunit; small terminase subunit 1620832..1621488 Rahnella sp. Y9602 10212481 YP_004212230.1 CDS Rahaq_1481 NC_015061.1 1621584 1622054 D PFAM: head completion protein; KEGG: yps:YPTB1758 phage head completion protein GpL; head completion protein 1621584..1622054 Rahnella sp. Y9602 10212482 YP_004212231.1 CDS Rahaq_1482 NC_015061.1 1622054 1622257 D PFAM: tail X family protein; KEGG: yps:YPTB1757 phage-related tail protein; tail X family protein 1622054..1622257 Rahnella sp. Y9602 10212483 YP_004212232.1 CDS Rahaq_1483 NC_015061.1 1622263 1622472 D KEGG: spe:Spro_0872 prophage Hp1 family holin; prophage Hp1 family holin 1622263..1622472 Rahnella sp. Y9602 10212484 YP_004212233.1 CDS Rahaq_1484 NC_015061.1 1622453 1622962 D PFAM: glycoside hydrolase family 24; KEGG: yps:YPTB1755 phage lysozyme; glycoside hydrolase 1622453..1622962 Rahnella sp. Y9602 10212485 YP_004212234.1 CDS Rahaq_1485 NC_015061.1 1622962 1623405 D TIGRFAM: phage lysis regulatory protein, LysB family; KEGG: yps:YPTB1754 Orf27; P2 LysB homolog; control of lysis [Ente; phage lysis regulatory protein, LysB family 1622962..1623405 Rahnella sp. Y9602 10212486 YP_004212235.1 CDS Rahaq_1486 NC_015061.1 1623483 1623950 D KEGG: ecv:APECO1_4476 tail protein; tail protein 1623483..1623950 Rahnella sp. Y9602 10212487 YP_004212236.1 CDS Rahaq_1487 NC_015061.1 1623943 1624389 D TIGRFAM: phage virion morphogenesis protein; KEGG: ctu:Ctu_32300 tail completion protein S; phage virion morphogenesis protein 1623943..1624389 Rahnella sp. Y9602 10212488 YP_004212237.1 CDS Rahaq_1488 NC_015061.1 1624470 1625342 D KEGG: kpn:KPN_01312 hypothetical protein; hypothetical protein 1624470..1625342 Rahnella sp. Y9602 10212489 YP_004212238.1 CDS Rahaq_1489 NC_015061.1 1625459 1626100 D TIGRFAM: phage baseplate assembly protein V; KEGG: spe:Spro_0869 phage baseplate assembly protein V; phage baseplate assembly protein V 1625459..1626100 Rahnella sp. Y9602 10212490 YP_004212239.1 CDS Rahaq_1490 NC_015061.1 1626097 1626447 D PFAM: GPW/gp25 family protein; KEGG: yps:YPTB1750 hypothetical protein; GPW/gp25 family protein 1626097..1626447 Rahnella sp. Y9602 10212491 YP_004212240.1 CDS Rahaq_1491 NC_015061.1 1626451 1627359 D PFAM: Baseplate J family protein; KEGG: spe:Spro_0867 baseplate J family protein; baseplate J family protein 1626451..1627359 Rahnella sp. Y9602 10212492 YP_004212241.1 CDS Rahaq_1492 NC_015061.1 1627352 1627879 D TIGRFAM: phage tail protein I; KEGG: ecz:ECS88_2197 tail protein I (GPI); phage tail protein I 1627352..1627879 Rahnella sp. Y9602 10212493 YP_004212242.1 CDS Rahaq_1493 NC_015061.1 1627889 1630405 D PFAM: tail fiber repeat 2 protein; KEGG: ecz:ECS88_2196 phage tail fiber protein H (GpH); tail fiber repeat 2 protein 1627889..1630405 Rahnella sp. Y9602 10212494 YP_004212243.1 CDS Rahaq_1494 NC_015061.1 1630415 1630870 D PFAM: tail assembly chaperone gp38; KEGG: plu:plu3023 hypothetical protein; tail assembly chaperone gp38 1630415..1630870 Rahnella sp. Y9602 10212495 YP_004212244.1 CDS Rahaq_1495 NC_015061.1 1631033 1632202 D KEGG: spe:Spro_0863 tail sheath protein; tail sheath protein 1631033..1632202 Rahnella sp. Y9602 10212496 YP_004212245.1 CDS Rahaq_1496 NC_015061.1 1632216 1632725 D KEGG: spe:Spro_0862 phage major tail tube protein; TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; phage major tail tube protein 1632216..1632725 Rahnella sp. Y9602 10212497 YP_004212246.1 CDS Rahaq_1497 NC_015061.1 1632784 1633065 D PFAM: tail E family protein; KEGG: spe:Spro_0861 tail E family protein; tail E family protein 1632784..1633065 Rahnella sp. Y9602 10212498 YP_004212247.1 CDS Rahaq_1498 NC_015061.1 1633098 1633217 D KEGG: dze:Dd1591_1812 P2 GpE family protein; manually curated; PFAM: P2 GpE family protein; P2 GpE family protein 1633098..1633217 Rahnella sp. Y9602 10212499 YP_004212248.1 CDS Rahaq_1499 NC_015061.1 1633210 1635801 D KEGG: yps:YPTB1741 bacteriophage P2 tail protein gpT; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region; phage tail tape measure protein, TP901 family 1633210..1635801 Rahnella sp. Y9602 10212500 YP_004212249.1 CDS Rahaq_1500 NC_015061.1 1635812 1636297 D PFAM: P2 GpU family protein; KEGG: yps:YPTB1740 phage tail protein; P2 GpU family protein 1635812..1636297 Rahnella sp. Y9602 10212501 YP_004212250.1 CDS Rahaq_1501 NC_015061.1 1636294 1637457 D KEGG: yps:YPTB1739 D protein bacteriophage 186 and P2; D protein bacteriophage 186 and P2 1636294..1637457 Rahnella sp. Y9602 10212502 YP_004212251.1 CDS Rahaq_1502 NC_015061.1 1637487 1637735 R KEGG: etr:ETAE_1308 hypothetical protein; hypothetical protein complement(1637487..1637735) Rahnella sp. Y9602 10212503 YP_004212252.1 CDS Rahaq_1503 NC_015061.1 1637886 1638119 D PFAM: transcriptional activator Ogr/delta; KEGG: ecg:E2348C_2893 predicted DNA-binding transcriptional regulator; transcriptional activator Ogr/delta 1637886..1638119 Rahnella sp. Y9602 10212504 YP_004212253.1 CDS Rahaq_1504 NC_015061.1 1638635 1640917 R TIGRFAM: formate acetyltransferase; KEGG: spe:Spro_1702 formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; formate acetyltransferase complement(1638635..1640917) Rahnella sp. Y9602 10212505 YP_004212254.1 CDS Rahaq_1505 NC_015061.1 1640993 1641850 R KEGG: spe:Spro_1703 formate transporter; TIGRFAM: formate/nitrite transporter; PFAM: formate/nitrite transporter; formate/nitrite transporter complement(1640993..1641850) Rahnella sp. Y9602 10212506 YP_004212255.1 CDS Rahaq_1506 NC_015061.1 1642349 1644175 R PFAM: protein of unknown function DUF181; KEGG: spe:Spro_1704 hypothetical protein; hypothetical protein complement(1642349..1644175) Rahnella sp. Y9602 10212507 YP_004212256.1 CDS Rahaq_1507 NC_015061.1 1644438 1645523 D TIGRFAM: phosphoserine aminotransferase; KEGG: ypg:YpAngola_A1952 phosphoserine aminotransferase; PFAM: aminotransferase class V; phosphoserine aminotransferase 1644438..1645523 Rahnella sp. Y9602 10212508 YP_004212257.1 CDS Rahaq_1508 NC_015061.1 1645628 1646911 D KEGG: cko:CKO_02164 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); 3-phosphoshikimate 1-carboxyvinyltransferase 1645628..1646911 Rahnella sp. Y9602 10212509 YP_004212258.1 CDS Rahaq_1509 NC_015061.1 1647108 1647806 D TIGRFAM: cytidylate kinase; KEGG: spe:Spro_1708 cytidylate kinase; PFAM: cytidylate kinase region; cytidylate kinase 1647108..1647806 Rahnella sp. Y9602 10212510 YP_004212259.1 CDS Rahaq_1510 NC_015061.1 1647927 1649636 D KEGG: dze:Dd1591_2339 30S ribosomal protein S1; TIGRFAM: ribosomal protein S1; PFAM: RNA binding S1 domain protein; 30S ribosomal protein S1 1647927..1649636 Rahnella sp. Y9602 10212511 YP_004212260.1 CDS Rahaq_1511 NC_015061.1 1649697 1649981 D TIGRFAM: integration host factor, subunit beta; PFAM: histone family protein DNA-binding protein; KEGG: spe:Spro_1710 integration host factor subunit beta; SMART: histone family protein DNA-binding protein; integration host factor subunit beta 1649697..1649981 Rahnella sp. Y9602 10212512 YP_004212261.1 CDS Rahaq_1512 NC_015061.1 1650253 1652499 D KEGG: spe:Spro_1711 hypothetical protein; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2 1650253..1652499 Rahnella sp. Y9602 10212513 YP_004212262.1 CDS Rahaq_1513 NC_015061.1 1652538 1654286 D TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter transmembrane region; ABC transporter related; KEGG: ecz:ECS88_0942 lipid transporter ATP-binding/permease protein; SMART: AAA ATPase; lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA 1652538..1654286 Rahnella sp. Y9602 10212514 YP_004212263.1 CDS Rahaq_1514 NC_015061.1 1654283 1655272 D TIGRFAM: tetraacyldisaccharide 4'-kinase; KEGG: spe:Spro_1713 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; tetraacyldisaccharide 4'-kinase 1654283..1655272 Rahnella sp. Y9602 10212515 YP_004212264.1 CDS Rahaq_1515 NC_015061.1 1655622 1655831 D KEGG: yen:YE1546 cold shock protein CspE2; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock protein 1655622..1655831 Rahnella sp. Y9602 10212516 YP_004212265.1 CDS Rahaq_1516 NC_015061.1 1656093 1656305 D KEGG: yen:YE1547 cold shock-like protein cspE3; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock protein 1656093..1656305 Rahnella sp. Y9602 10212517 YP_004212266.1 CDS Rahaq_1517 NC_015061.1 1656401 1657624 D PFAM: protein of unknown function DUF1006; KEGG: spe:Spro_1717 hypothetical protein; hypothetical protein 1656401..1657624 Rahnella sp. Y9602 10212518 YP_004212267.1 CDS Rahaq_1518 NC_015061.1 1658006 1658188 D PFAM: protein of unknown function DUF343; KEGG: yen:YE1549 hypothetical protein; hypothetical protein 1658006..1658188 Rahnella sp. Y9602 10212519 YP_004212268.1 CDS Rahaq_1519 NC_015061.1 1658185 1658943 D TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: ebi:EbC_15100 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; 3-deoxy-D-manno-octulosonate cytidylyltransferase 1658185..1658943 Rahnella sp. Y9602 10212520 YP_004212269.1 CDS Rahaq_1520 NC_015061.1 1659139 1660032 D PFAM: aminoglycoside phosphotransferase; KEGG: spe:Spro_1720 hypothetical protein; aminoglycoside phosphotransferase 1659139..1660032 Rahnella sp. Y9602 10212521 YP_004212270.1 CDS Rahaq_1521 NC_015061.1 1660034 1660813 R PFAM: protein of unknown function DUF218; KEGG: cro:ROD_09881 hypothetical protein; hypothetical protein complement(1660034..1660813) Rahnella sp. Y9602 10212522 YP_004212271.1 CDS Rahaq_1522 NC_015061.1 1660969 1661754 D PFAM: methyltransferase type 11; KEGG: dze:Dd1591_2302 metallothionein SmtA; type 11 methyltransferase 1660969..1661754 Rahnella sp. Y9602 10212523 YP_004212272.1 CDS Rahaq_1523 NC_015061.1 1661751 1663073 D PFAM: chromosome segregation and condensation protein MukF; KEGG: spe:Spro_1723 condesin subunit F; chromosome segregation and condensation protein MukF 1661751..1663073 Rahnella sp. Y9602 10212524 YP_004212273.1 CDS Rahaq_1524 NC_015061.1 1663054 1663785 D PFAM: chromosome segregation and condensation protein MukE; KEGG: spe:Spro_1724 condesin subunit E; chromosome segregation and condensation protein MukE 1663054..1663785 Rahnella sp. Y9602 10212525 YP_004212274.1 CDS Rahaq_1525 NC_015061.1 1663782 1668230 D PFAM: chromosome segregation and condensation protein MukB domain protein; KEGG: spe:Spro_1725 cell division protein MukB; chromosome segregation and condensation protein MukB domain protein 1663782..1668230 Rahnella sp. Y9602 10212526 YP_004212275.1 CDS Rahaq_1526 NC_015061.1 1668592 1670442 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; KEGG: spe:Spro_1726 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 1668592..1670442 Rahnella sp. Y9602 10212527 YP_004212276.1 CDS Rahaq_1527 NC_015061.1 1670622 1671173 D PFAM: protein of unknown function DUF882; KEGG: spe:Spro_1727 hypothetical protein; hypothetical protein 1670622..1671173 Rahnella sp. Y9602 10212528 YP_004212277.1 CDS Rahaq_1528 NC_015061.1 1671225 1671872 D KEGG: cro:ROD_09961 hypothetical protein; hypothetical protein 1671225..1671872 Rahnella sp. Y9602 10212529 YP_004212278.1 CDS Rahaq_1529 NC_015061.1 1671958 1673148 R KEGG: spe:Spro_1729 aromatic amino acid aminotransferase; PFAM: aminotransferase class I and II; aspartate transaminase complement(1671958..1673148) Rahnella sp. Y9602 10212530 YP_004212279.1 CDS Rahaq_1530 NC_015061.1 1673390 1674502 R PFAM: porin Gram-negative type; KEGG: spe:Spro_1730 porin; porin complement(1673390..1674502) Rahnella sp. Y9602 10212531 YP_004212280.1 CDS Rahaq_1531 NC_015061.1 1674802 1676202 R TIGRFAM: asparaginyl-tRNA synthetase; KEGG: pct:PC1_1785 asparaginyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; asparaginyl-tRNA synthetase complement(1674802..1676202) Rahnella sp. Y9602 10212532 YP_004212281.1 CDS Rahaq_1532 NC_015061.1 1676462 1677667 R KEGG: spe:Spro_1732 nicotinate phosphoribosyltransferase; TIGRFAM: nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; nicotinate phosphoribosyltransferase complement(1676462..1677667) Rahnella sp. Y9602 10212533 YP_004212282.1 CDS Rahaq_1533 NC_015061.1 1678362 1680977 D KEGG: spe:Spro_1734 aminopeptidase N; TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; aminopeptidase 1678362..1680977 Rahnella sp. Y9602 10212534 YP_004212283.1 CDS Rahaq_1534 NC_015061.1 1681053 1681835 R KEGG: spe:Spro_1735 aliphatic sulfonates transport ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(1681053..1681835) Rahnella sp. Y9602 10212535 YP_004212284.1 CDS Rahaq_1535 NC_015061.1 1681832 1682623 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_1736 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1681832..1682623) Rahnella sp. Y9602 10212536 YP_004212285.1 CDS Rahaq_1536 NC_015061.1 1682635 1683789 R TIGRFAM: alkanesulfonate monooxygenase, FMNH(2)-dependent; KEGG: ypz:YPZ3_3115 alkanesulfonate monooxygenase; PFAM: luciferase; alkanesulfonate monooxygenase complement(1682635..1683789) Rahnella sp. Y9602 10212537 YP_004212286.1 CDS Rahaq_1537 NC_015061.1 1683849 1684823 R KEGG: spe:Spro_1738 alkanesulfonate transporter substrate-binding subunit; TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; aliphatic sulfonates ABC transporter substrate-binding protein complement(1683849..1684823) Rahnella sp. Y9602 10212538 YP_004212287.1 CDS Rahaq_1538 NC_015061.1 1684842 1685423 R TIGRFAM: FMN reductase; KEGG: ypb:YPTS_3796 NAD(P)H-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; FMN reductase complement(1684842..1685423) Rahnella sp. Y9602 10212539 YP_004212288.1 CDS Rahaq_1539 NC_015061.1 1685739 1686749 D TIGRFAM: dihydroorotate dehydrogenase; KEGG: ypb:YPTS_1543 dihydroorotate dehydrogenase 2; PFAM: dihydroorotate oxidase; dihydroorotate dehydrogenase 1685739..1686749 Rahnella sp. Y9602 10212540 YP_004212289.1 CDS Rahaq_1540 NC_015061.1 1686934 1687482 D PFAM: protein of unknown function DUF1379; KEGG: spe:Spro_1741 hypothetical protein; hypothetical protein 1686934..1687482 Rahnella sp. Y9602 10212541 YP_004212290.1 CDS Rahaq_1541 NC_015061.1 1687513 1688616 R PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; ferredoxin; KEGG: spe:Spro_1742 MOSC domain-containing protein; MOSC domain-containing protein complement(1687513..1688616) Rahnella sp. Y9602 10212542 YP_004212291.1 CDS Rahaq_1542 NC_015061.1 1688727 1690847 D KEGG: yen:YE1571 23S rRNA m(2)G2445 methyltransferase; PFAM: RNA methylase; THUMP domain-containing protein; rRNA (guanine-N(2)-)-methyltransferase 1688727..1690847 Rahnella sp. Y9602 10212543 YP_004212292.1 CDS Rahaq_1543 NC_015061.1 1690853 1692757 D KEGG: spe:Spro_1744 ABC transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1690853..1692757 Rahnella sp. Y9602 10212544 YP_004212293.1 CDS Rahaq_1544 NC_015061.1 1692839 1694110 D KEGG: ypy:YPK_2639 PqiA family integral membrane protein; TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A; PqiA family integral membrane protein 1692839..1694110 Rahnella sp. Y9602 10212545 YP_004212294.1 CDS Rahaq_1545 NC_015061.1 1694097 1695749 D PFAM: Mammalian cell entry related domain protein; KEGG: spe:Spro_1746 paraquat-inducible protein B; mammalian cell entry domain-containing protein 1694097..1695749 Rahnella sp. Y9602 10212546 YP_004212295.1 CDS Rahaq_1546 NC_015061.1 1695749 1696315 D PFAM: protein of unknown function DUF330; KEGG: yen:YE1575 lipoprotein protein; hypothetical protein 1695749..1696315 Rahnella sp. Y9602 10212547 YP_004212296.1 CDS Rahaq_1547 NC_015061.1 1696591 1696758 D KEGG: ypb:YPTS_1551 ribosome modulation factor; manually curated; PFAM: ribosome modulation factor; ribosome modulation factor 1696591..1696758 Rahnella sp. Y9602 10212548 YP_004212297.1 CDS Rahaq_1548 NC_015061.1 1696909 1697427 R TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA; KEGG: spe:Spro_1751 3-hydroxydecanoyl-(acyl carrier protein) dehydratase; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA complement(1696909..1697427) Rahnella sp. Y9602 10212549 YP_004212298.1 CDS Rahaq_1549 NC_015061.1 1697496 1699262 R KEGG: spe:Spro_1752 Lon protease; Lon protease complement(1697496..1699262) Rahnella sp. Y9602 10212550 YP_004212299.1 CDS Rahaq_1550 NC_015061.1 1699473 1699934 D PFAM: protein of unknown function DUF1047; KEGG: spe:Spro_1753 hypothetical protein; hypothetical protein 1699473..1699934 Rahnella sp. Y9602 10212551 YP_004212300.1 CDS Rahaq_1551 NC_015061.1 1700044 1701120 R PFAM: OmpA/MotB domain protein; KEGG: eay:EAM_1377 outer membrane protein A; OmpA/MotB domain-containing protein complement(1700044..1701120) Rahnella sp. Y9602 10212552 YP_004212301.1 CDS Rahaq_1552 NC_015061.1 1701478 1701984 R PFAM: cell division inhibitor SulA; KEGG: spe:Spro_1755 SOS cell division inhibitor; cell division inhibitor SulA complement(1701478..1701984) Rahnella sp. Y9602 10212553 YP_004212302.1 CDS Rahaq_1553 NC_015061.1 1702201 1702833 D PFAM: TfoX domain-containing protein; KEGG: ddd:Dda3937_02826 CRP-S promoter co-activator; competence-specific genes regulator 1702201..1702833 Rahnella sp. Y9602 10212554 YP_004212303.1 CDS Rahaq_1554 NC_015061.1 1702855 1704996 R TIGRFAM: hypothetical protein; integral membrane protein, YccS/YhfK family; KEGG: yen:YE1584 hypothetical protein; hypothetical protein complement(1702855..1704996) Rahnella sp. Y9602 10212555 YP_004212304.1 CDS Rahaq_1555 NC_015061.1 1705039 1705500 R PFAM: protein of unknown function DUF307; KEGG: eca:ECA1755 hypothetical protein; hypothetical protein complement(1705039..1705500) Rahnella sp. Y9602 10212556 YP_004212305.1 CDS Rahaq_1556 NC_015061.1 1705677 1707731 D PFAM: UvrD/REP helicase; KEGG: spe:Spro_1759 DNA helicase IV; UvrD/REP helicase 1705677..1707731 Rahnella sp. Y9602 10212557 YP_004212306.1 CDS Rahaq_1557 NC_015061.1 1707798 1708259 R TIGRFAM: methylglyoxal synthase; KEGG: dze:Dd1591_1215 methylglyoxal synthase; PFAM: MGS domain protein; methylglyoxal synthase complement(1707798..1708259) Rahnella sp. Y9602 10212558 YP_004212307.1 CDS Rahaq_1558 NC_015061.1 1708379 1709038 R PFAM: Protein of unknown function DUF2057; KEGG: spe:Spro_1761 hypothetical protein; hypothetical protein complement(1708379..1709038) Rahnella sp. Y9602 10212559 YP_004212308.1 CDS Rahaq_1559 NC_015061.1 1709227 1709640 D PFAM: CoA-binding domain protein; KEGG: yen:YE1589 hypothetical protein; CoA-binding protein 1709227..1709640 Rahnella sp. Y9602 10212560 YP_004212309.1 CDS Rahaq_1560 NC_015061.1 1709723 1710040 R KEGG: bci:BCI_0412 heat shock protein HspQ; TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; hemimethylated DNA binding protein complement(1709723..1710040) Rahnella sp. Y9602 10212561 YP_004212310.1 CDS Rahaq_1561 NC_015061.1 1710168 1711403 R SMART: PUA domain containing protein; KEGG: spe:Spro_1764 PUA domain-containing protein; PUA domain containing protein complement(1710168..1711403) Rahnella sp. Y9602 10212562 YP_004212311.1 CDS Rahaq_1562 NC_015061.1 1711460 1711738 D PFAM: acylphosphatase; KEGG: spe:Spro_1765 acylphosphatase; acylphosphatase 1711460..1711738 Rahnella sp. Y9602 10212563 YP_004212312.1 CDS Rahaq_1563 NC_015061.1 1711745 1712074 R KEGG: dze:Dd1591_1220 sulfur relay protein, TusE/DsrC/DsvC family; TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC family protein; TusE/DsrC/DsvC family sulfur relay protein complement(1711745..1712074) Rahnella sp. Y9602 10212564 YP_004212313.1 CDS Rahaq_1564 NC_015061.1 1712182 1712856 R PFAM: protein of unknown function UPF0005; KEGG: pct:PC1_2537 hypothetical protein; hypothetical protein complement(1712182..1712856) Rahnella sp. Y9602 10212565 YP_004212314.1 CDS Rahaq_1565 NC_015061.1 1713688 1714605 R KEGG: rlg:Rleg_1052 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(1713688..1714605) Rahnella sp. Y9602 10212568 YP_004212315.1 CDS Rahaq_1566 NC_015061.1 1714743 1715633 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: gvi:glr1439 hypothetical protein; NAD-dependent epimerase/dehydratase 1714743..1715633 Rahnella sp. Y9602 10212569 YP_004212316.1 CDS Rahaq_1567 NC_015061.1 1715832 1716920 D PFAM: extracellular solute-binding protein family 1; KEGG: spe:Spro_3949 extracellular solute-binding protein; extracellular solute-binding protein 1715832..1716920 Rahnella sp. Y9602 10212570 YP_004212317.1 CDS Rahaq_1568 NC_015061.1 1717008 1718777 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3948 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1717008..1718777 Rahnella sp. Y9602 10212571 YP_004212318.1 CDS Rahaq_1569 NC_015061.1 1718770 1719840 D KEGG: spe:Spro_3947 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1718770..1719840 Rahnella sp. Y9602 10212572 YP_004212319.1 CDS Rahaq_1570 NC_015061.1 1719938 1721563 D KEGG: esa:ESA_01817 hypothetical protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; ligand binding Tar domain protein; SMART: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 1719938..1721563 Rahnella sp. Y9602 10212573 YP_004212320.1 CDS Rahaq_1571 NC_015061.1 1721571 1722170 R KEGG: esa:ESA_01329 hypothetical protein; hypothetical protein complement(1721571..1722170) Rahnella sp. Y9602 10212574 YP_004212321.1 CDS Rahaq_1572 NC_015061.1 1722412 1722744 D PFAM: SmpA/OmlA domain-containing protein; KEGG: spe:Spro_3258 DNA-binding transcriptional activator OsmE; SmpA/OmlA domain-containing protein 1722412..1722744 Rahnella sp. Y9602 10212575 YP_004212322.1 CDS Rahaq_1573 NC_015061.1 1722786 1724513 R PFAM: sodium/hydrogen exchanger; TrkA-C domain protein; transporter-associated region; KEGG: ypb:YPTS_2590 potassium/proton antiporter; sodium/hydrogen exchanger complement(1722786..1724513) Rahnella sp. Y9602 10212576 YP_004212323.1 CDS Rahaq_1574 NC_015061.1 1724681 1724902 D KEGG: hna:Hneap_1660 hypothetical protein; hypothetical protein 1724681..1724902 Rahnella sp. Y9602 10212577 YP_004212324.1 CDS Rahaq_1575 NC_015061.1 1724953 1726266 R PFAM: FAD dependent oxidoreductase; KEGG: spe:Spro_2064 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(1724953..1726266) Rahnella sp. Y9602 10212578 YP_004212325.1 CDS Rahaq_1576 NC_015061.1 1726317 1726874 R KEGG: kva:Kvar_3360 transcriptional regulator, XRE family; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; cupin complement(1726317..1726874) Rahnella sp. Y9602 10212579 YP_004212326.1 CDS Rahaq_1577 NC_015061.1 1726879 1727682 R KEGG: kpu:KP1_2005 gamma-glutamyl-gamma-aminobutyrate hydrolase; PFAM: peptidase C26; gamma-glutamyl-gamma-aminobutyrate hydrolase complement(1726879..1727682) Rahnella sp. Y9602 10212580 YP_004212327.1 CDS Rahaq_1578 NC_015061.1 1728038 1729480 D PFAM: glutamine synthetase catalytic region; KEGG: spe:Spro_3216 glutamine synthetase catalytic region; glutamine synthetase 1728038..1729480 Rahnella sp. Y9602 10212581 YP_004212328.1 CDS Rahaq_1579 NC_015061.1 1729740 1729952 D hypothetical protein 1729740..1729952 Rahnella sp. Y9602 10212582 YP_004212329.1 CDS Rahaq_1580 NC_015061.1 1729942 1731318 D PFAM: amino acid permease-associated region; KEGG: yen:YE2759 amino acid permease; amino acid permease 1729942..1731318 Rahnella sp. Y9602 10212583 YP_004212330.1 CDS Rahaq_1581 NC_015061.1 1732002 1733429 R PFAM: Exonuclease domain protein; Exonuclease RNase T and DNA polymerase III; KEGG: spe:Spro_3214 exonuclease I; SMART: Exonuclease; Exodeoxyribonuclease I complement(1732002..1733429) Rahnella sp. Y9602 10212584 YP_004212331.1 CDS Rahaq_1582 NC_015061.1 1733667 1734764 D KEGG: spe:Spro_3209 hypothetical protein; hypothetical protein 1733667..1734764 Rahnella sp. Y9602 10212585 YP_004212332.1 CDS Rahaq_1583 NC_015061.1 1734932 1735264 D PFAM: protein of unknown function DUF496; KEGG: ypb:YPTS_1683 hypothetical protein; hypothetical protein 1734932..1735264 Rahnella sp. Y9602 10212586 YP_004212333.1 CDS Rahaq_1584 NC_015061.1 1735328 1736287 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: spe:Spro_1336 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(1735328..1736287) Rahnella sp. Y9602 10212587 YP_004212334.1 CDS Rahaq_1585 NC_015061.1 1736488 1737591 R KEGG: ypb:YPTS_3224 ABC transporter related; PFAM: ABC transporter related; TOBE domain-containing protein; SMART: AAA ATPase; ABC transporter complement(1736488..1737591) Rahnella sp. Y9602 10212588 YP_004212335.1 CDS Rahaq_1586 NC_015061.1 1737868 1739094 D PFAM: extracellular solute-binding protein family 1; KEGG: ypb:YPTS_3223 extracellular solute-binding protein; extracellular solute-binding protein 1737868..1739094 Rahnella sp. Y9602 10212589 YP_004212336.1 CDS Rahaq_1587 NC_015061.1 1739175 1740482 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypb:YPTS_3222 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1739175..1740482 Rahnella sp. Y9602 10212590 YP_004212337.1 CDS Rahaq_1588 NC_015061.1 1740496 1741347 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypb:YPTS_3221 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1740496..1741347 Rahnella sp. Y9602 10212591 YP_004212338.1 CDS Rahaq_1589 NC_015061.1 1741352 1742563 D KEGG: ypb:YPTS_3220 glycosyl hydrolase 53 protein; PFAM: glycosyl hydrolase 53 domain protein; arabinogalactan endo-1,4-beta-galactosidase 1741352..1742563 Rahnella sp. Y9602 10212592 YP_004212339.1 CDS Rahaq_1590 NC_015061.1 1742629 1744698 D KEGG: pct:PC1_2962 beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein; beta-galactosidase 1742629..1744698 Rahnella sp. Y9602 10212593 YP_004212340.1 CDS Rahaq_1591 NC_015061.1 1744779 1745096 D PFAM: Phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: ypb:YPTS_3218 phosphotransferase system PTS EIIB protein; phosphotransferase system EIIB/cysteine, phosphorylation site 1744779..1745096 Rahnella sp. Y9602 10212594 YP_004212341.1 CDS Rahaq_1592 NC_015061.1 1745416 1746672 R PFAM: porin LamB type; KEGG: enc:ECL_02641 maltoporin 1; porin complement(1745416..1746672) Rahnella sp. Y9602 10212595 YP_004212342.1 CDS Rahaq_1593 NC_015061.1 1746950 1748020 D KEGG: ddc:Dd586_2927 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator 1746950..1748020 Rahnella sp. Y9602 10212596 YP_004212343.1 CDS Rahaq_1594 NC_015061.1 1748107 1748583 D PFAM: protein of unknown function DUF805; KEGG: kpe:KPK_4724 hypothetical protein; hypothetical protein 1748107..1748583 Rahnella sp. Y9602 10212597 YP_004212344.1 CDS Rahaq_1595 NC_015061.1 1748611 1749159 R PFAM: protein of unknown function DUF1234; KEGG: pct:PC1_2842 hypothetical protein; hypothetical protein complement(1748611..1749159) Rahnella sp. Y9602 10212598 YP_004212345.1 CDS Rahaq_1596 NC_015061.1 1749156 1749995 R TIGRFAM: triphosphoribosyl-dephospho-CoA synthase CitG; KEGG: ctu:Ctu_35610 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-As ynthase; PFAM: triphosphoribosyl-dephospho-CoA protein; triphosphoribosyl-dephospho-CoA synthase CitG complement(1749156..1749995) Rahnella sp. Y9602 10212599 YP_004212346.1 CDS Rahaq_1597 NC_015061.1 1749973 1750512 R TIGRFAM: holo-ACP synthase CitX; KEGG: ent:Ent638_3371 holo-ACP synthase; PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; holo-ACP synthase CitX complement(1749973..1750512) Rahnella sp. Y9602 10212600 YP_004212347.1 CDS Rahaq_1598 NC_015061.1 1750512 1752038 R TIGRFAM: citrate lyase, subunit alpha; KEGG: ent:Ent638_3372 citrate lyase, subunit alpha; PFAM: Citrate lyase subunit alpha; citrate lyase, subunit alpha complement(1750512..1752038) Rahnella sp. Y9602 10212601 YP_004212348.1 CDS Rahaq_1599 NC_015061.1 1752069 1752944 R TIGRFAM: citrate lyase, subunit beta; KEGG: ctu:Ctu_35640 citrate lyase subunit beta; PFAM: HpcH/HpaI aldolase; citrate lyase, subunit beta complement(1752069..1752944) Rahnella sp. Y9602 10212602 YP_004212349.1 CDS Rahaq_1600 NC_015061.1 1752941 1753231 R TIGRFAM: citrate lyase acyl carrier protein; KEGG: ddc:Dd586_2563 citrate lyase acyl carrier protein; citrate lyase acyl carrier protein complement(1752941..1753231) Rahnella sp. Y9602 10212603 YP_004212350.1 CDS Rahaq_1601 NC_015061.1 1753247 1754341 R SMART: Citrate lyase ligase domain protein; TIGRFAM: citrate lyase ligase; cytidyltransferase-related domain protein; KEGG: ddd:Dda3937_04561 citrate lyase synthetase; PFAM: Citrate lyase ligase domain protein; GCN5-related N-acetyltransferase; citrate lyase ligase complement(1753247..1754341) Rahnella sp. Y9602 10212604 YP_004212351.1 CDS Rahaq_1602 NC_015061.1 1754428 1755315 R KEGG: ctu:Ctu_35670 hypothetical protein; PFAM: fumarylacetoacetate (FAA) hydrolase; ureidoglycolate lyase complement(1754428..1755315) Rahnella sp. Y9602 10212605 YP_004212352.1 CDS Rahaq_1603 NC_015061.1 1755352 1756716 R PFAM: Citrate carrier protein; KEGG: cko:CKO_03359 hypothetical protein; citrate carrier protein complement(1755352..1756716) Rahnella sp. Y9602 10212606 YP_004212353.1 CDS Rahaq_1604 NC_015061.1 1757088 1758755 D KEGG: enc:ECL_04301 two-component system, CitB family, cit operon sensor histidine kinase CitA; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; signal transduction histidine kinase regulating citrate/malate metabolism 1757088..1758755 Rahnella sp. Y9602 10212607 YP_004212354.1 CDS Rahaq_1605 NC_015061.1 1758742 1759431 D KEGG: enc:ECL_04302 two-component system, CitB family, response regulator CitB; PFAM: response regulator receiver; SMART: response regulator receiver; fused response regulator receiver/hypothetical protein 1758742..1759431 Rahnella sp. Y9602 10212608 YP_004212355.1 CDS Rahaq_1606 NC_015061.1 1759442 1760872 R KEGG: ebi:EbC_28810 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein complement(1759442..1760872) Rahnella sp. Y9602 10212609 YP_004212356.1 CDS Rahaq_1607 NC_015061.1 1761105 1762553 R TIGRFAM: AMP nucleosidase; KEGG: eca:ECA1547 AMP nucleosidase; PFAM: AMP nucleoside phosphorylase-like; purine or other phosphorylase family 1; AMP nucleosidase complement(1761105..1762553) Rahnella sp. Y9602 10212610 YP_004212357.1 CDS Rahaq_1608 NC_015061.1 1762682 1763323 D PFAM: Glutathione S-transferase domain; KEGG: ebi:EbC_12300 glutathione S-transferase family protein; glutathione S-transferase 1762682..1763323 Rahnella sp. Y9602 10212611 YP_004212358.1 CDS Rahaq_1609 NC_015061.1 1763390 1764709 R KEGG: ctu:Ctu_26880 shikimate transporter; TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: major facilitator superfamily MFS_1; metabolite/H+ symporter, major facilitator superfamily (MFS) complement(1763390..1764709) Rahnella sp. Y9602 10212612 YP_004212359.1 CDS Rahaq_1610 NC_015061.1 1764914 1765612 R PFAM: pseudouridine synthase; KEGG: spe:Spro_3940 pseudouridine synthase; pseudouridine synthase complement(1764914..1765612) Rahnella sp. Y9602 10212613 YP_004212360.1 CDS Rahaq_1611 NC_015061.1 1765763 1766671 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbr:BB1990 LysR family regulatory protein; LysR family transcriptional regulator complement(1765763..1766671) Rahnella sp. Y9602 10212614 YP_004212361.1 CDS Rahaq_1612 NC_015061.1 1766805 1767578 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pap:PSPA7_2236 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(1766805..1767578) Rahnella sp. Y9602 10212615 YP_004212362.1 CDS Rahaq_1613 NC_015061.1 1767770 1768786 R KEGG: kva:Kvar_0807 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator complement(1767770..1768786) Rahnella sp. Y9602 10212616 YP_004212363.1 CDS Rahaq_1614 NC_015061.1 1769031 1770272 D TIGRFAM: oligosaccharide/H+ symporter, major facilitator superfamily (MFS); KEGG: kpu:KP1_4537 galactoside permease; oligosaccharide/H+ symporter, major facilitator superfamily (MFS) 1769031..1770272 Rahnella sp. Y9602 10212617 YP_004212364.1 CDS Rahaq_1615 NC_015061.1 1770291 1771724 D TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32 domain protein; KEGG: kpu:KP1_4536 family 32 glycoside hydrolase; SMART: glycoside hydrolase family 32; sucrose-6-phosphate hydrolase 1770291..1771724 Rahnella sp. Y9602 10212618 YP_004212365.1 CDS Rahaq_1616 NC_015061.1 1771848 1773200 D KEGG: kpu:KP1_4535 outer membrane protein; outer membrane protein 1771848..1773200 Rahnella sp. Y9602 10212619 YP_004212366.1 CDS Rahaq_1617 NC_015061.1 1773256 1773390 R hypothetical protein complement(1773256..1773390) Rahnella sp. Y9602 10212620 YP_004212367.1 CDS Rahaq_1618 NC_015061.1 1773492 1774277 R PFAM: MltA-interacting MipA family protein; KEGG: ebi:EbC_17550 conserved uncharacterized protein; MltA-interacting MipA family protein complement(1773492..1774277) Rahnella sp. Y9602 10212621 YP_004212368.1 CDS Rahaq_1619 NC_015061.1 1774418 1774582 D hypothetical protein 1774418..1774582 Rahnella sp. Y9602 10212622 YP_004212369.1 CDS Rahaq_1620 NC_015061.1 1774609 1775751 D KEGG: pam:PANA_3995 AcrA; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 1774609..1775751 Rahnella sp. Y9602 10212623 YP_004212370.1 CDS Rahaq_1621 NC_015061.1 1775748 1778822 D PFAM: acriflavin resistance protein; KEGG: enc:ECL_02244 RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; acriflavin resistance protein 1775748..1778822 Rahnella sp. Y9602 10212624 YP_004212371.1 CDS Rahaq_1622 NC_015061.1 1778934 1779722 D PFAM: alpha/beta hydrolase fold; KEGG: spe:Spro_2663 dioxygenase; alpha/beta hydrolase 1778934..1779722 Rahnella sp. Y9602 10212625 YP_004212372.1 CDS Rahaq_1623 NC_015061.1 1779818 1781065 R KEGG: pfs:PFLU2294 levansucrase; PFAM: glycoside hydrolase family 68; levansucrase complement(1779818..1781065) Rahnella sp. Y9602 10212626 YP_004212373.1 CDS Rahaq_1624 NC_015061.1 1781374 1782636 R KEGG: bur:Bcep18194_B0413 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; Bcr/CflA subfamily drug resistance transporter complement(1781374..1782636) Rahnella sp. Y9602 10212627 YP_004212374.1 CDS Rahaq_1625 NC_015061.1 1782673 1783545 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bur:Bcep18194_B0412 LysR family transcriptional regulator; LysR family transcriptional regulator 1782673..1783545 Rahnella sp. Y9602 10212628 YP_004212375.1 CDS Rahaq_1626 NC_015061.1 1783600 1784112 D PFAM: GCN5-related N-acetyltransferase; KEGG: enc:ECL_02140 acetyltransferase, GNAT family; N-acetyltransferase GCN5 1783600..1784112 Rahnella sp. Y9602 10212629 YP_004212376.1 CDS Rahaq_1627 NC_015061.1 1784199 1785089 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2455 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1784199..1785089) Rahnella sp. Y9602 10212630 YP_004212377.1 CDS Rahaq_1628 NC_015061.1 1785319 1786515 D PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2456 major facilitator transporter; major facilitator superfamily protein 1785319..1786515 Rahnella sp. Y9602 10212631 YP_004212378.1 CDS Rahaq_1629 NC_015061.1 1786526 1787554 D KEGG: spe:Spro_2457 signal peptide protein; hypothetical protein 1786526..1787554 Rahnella sp. Y9602 10212632 YP_004212379.1 CDS Rahaq_1630 NC_015061.1 1787603 1788031 D KEGG: sli:Slin_2181 hypothetical protein; hypothetical protein 1787603..1788031 Rahnella sp. Y9602 10212633 YP_004212380.1 CDS Rahaq_1631 NC_015061.1 1788356 1789252 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: enc:ECL_02248 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1788356..1789252) Rahnella sp. Y9602 10212634 YP_004212381.1 CDS Rahaq_1632 NC_015061.1 1789350 1790405 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: enc:ECL_02247 NAD-dependent epimerase/dehydratase family protein; NAD-dependent epimerase/dehydratase 1789350..1790405 Rahnella sp. Y9602 10212635 YP_004212382.1 CDS Rahaq_1635 NC_015061.1 1790915 1791397 R KEGG: rlg:Rleg_1861 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR complement(1790915..1791397) Rahnella sp. Y9602 10212638 YP_004212383.1 CDS Rahaq_1636 NC_015061.1 1791468 1792403 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: rpc:RPC_4092 zinc-binding alcohol dehydrogenase; alcohol dehydrogenase 1791468..1792403 Rahnella sp. Y9602 10212639 YP_004212384.1 CDS Rahaq_1637 NC_015061.1 1792892 1793791 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ent:Ent638_1879 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1792892..1793791) Rahnella sp. Y9602 10212640 YP_004212385.1 CDS Rahaq_1638 NC_015061.1 1793932 1794507 D PFAM: NAD(P)H dehydrogenase (quinone); KEGG: eca:ECA1483 NAD(P)H oxidoreductase; NAD(P)H dehydrogenase (quinone) 1793932..1794507 Rahnella sp. Y9602 10212641 YP_004212386.1 CDS Rahaq_1639 NC_015061.1 1794523 1794801 D PFAM: YCII-related; KEGG: eca:ECA1484 hypothetical protein; hypothetical protein 1794523..1794801 Rahnella sp. Y9602 10212642 YP_004212387.1 CDS Rahaq_1640 NC_015061.1 1794846 1795388 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: ent:Ent638_1875 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 1794846..1795388 Rahnella sp. Y9602 10212643 YP_004212388.1 CDS Rahaq_1641 NC_015061.1 1795593 1796216 R PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: ebi:EbC_43640 pyridoxamine 5\'-phosphate oxidase family protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(1795593..1796216) Rahnella sp. Y9602 10212644 YP_004212389.1 CDS Rahaq_1642 NC_015061.1 1796278 1796391 R hypothetical protein complement(1796278..1796391) Rahnella sp. Y9602 10212645 YP_004212390.1 CDS Rahaq_1643 NC_015061.1 1796445 1796984 R KEGG: dda:Dd703_0041 lysine exporter protein (LysE/YggA); manually curated; PFAM: lysine exporter protein (LYSE/YGGA); lysine exporter protein LysE/YggA complement(1796445..1796984) Rahnella sp. Y9602 10212646 YP_004212391.1 CDS Rahaq_1644 NC_015061.1 1796989 1797285 R PFAM: Chorismate mutase, type II; KEGG: ebi:EbC_pEb17201570 chorismate mutase family protein; chorismate mutase complement(1796989..1797285) Rahnella sp. Y9602 10212647 YP_004212392.1 CDS Rahaq_1645 NC_015061.1 1797623 1798240 D manually curated; KEGG: eca:ECA1481 hypothetical protein; hypothetical protein 1797623..1798240 Rahnella sp. Y9602 10212648 YP_004212393.1 CDS Rahaq_1646 NC_015061.1 1798378 1798860 D KEGG: dze:Dd1591_2454 peroxiredoxin; PFAM: glutathione peroxidase; peroxiredoxin 1798378..1798860 Rahnella sp. Y9602 10212649 YP_004212394.1 CDS Rahaq_1647 NC_015061.1 1798857 1799552 R KEGG: eca:ECA1468 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(1798857..1799552) Rahnella sp. Y9602 10212650 YP_004212395.1 CDS Rahaq_1648 NC_015061.1 1799563 1801251 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pwa:Pecwa_2990 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1799563..1801251) Rahnella sp. Y9602 10212651 YP_004212396.1 CDS Rahaq_1649 NC_015061.1 1801235 1802272 R PFAM: extracellular solute-binding protein family 1; KEGG: pwa:Pecwa_2989 extracellular solute-binding protein family 1; extracellular solute-binding protein complement(1801235..1802272) Rahnella sp. Y9602 10212652 YP_004212397.1 CDS Rahaq_1650 NC_015061.1 1802486 1803400 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pwa:Pecwa_1289 diguanylate cyclase; SMART: GGDEF domain containing protein; diguanylate cyclase complement(1802486..1803400) Rahnella sp. Y9602 10212653 YP_004212398.1 CDS Rahaq_1651 NC_015061.1 1803739 1804335 R KEGG: set:SEN1367 conserved hypothetical DNA-binding protein; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(1803739..1804335) Rahnella sp. Y9602 10212654 YP_004212399.1 CDS Rahaq_1652 NC_015061.1 1804379 1805083 D PFAM: B3/4 domain protein; KEGG: spq:SPAB_01596 hypothetical protein; B3/4 domain-containing protein 1804379..1805083 Rahnella sp. Y9602 10212655 YP_004212400.1 CDS Rahaq_1654 NC_015061.1 1805360 1806133 R KEGG: ebi:EbC_28640 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(1805360..1806133) Rahnella sp. Y9602 10212657 YP_004212401.1 CDS Rahaq_1655 NC_015061.1 1806150 1806935 R KEGG: ebi:EbC_28630 oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter complement(1806150..1806935) Rahnella sp. Y9602 10212658 YP_004212402.1 CDS Rahaq_1656 NC_015061.1 1806932 1808728 R KEGG: ebi:EbC_28620 oligopeptide/dipeptide ABC transporter permease and ATP-binding protein; PFAM: ABC transporter related; binding-protein-dependent transport systems inner membrane component; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter complement(1806932..1808728) Rahnella sp. Y9602 10212659 YP_004212403.1 CDS Rahaq_1657 NC_015061.1 1808725 1809672 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_28610 oligopeptide/dipeptide ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein complement(1808725..1809672) Rahnella sp. Y9602 10212660 YP_004212404.1 CDS Rahaq_1658 NC_015061.1 1809687 1811261 R PFAM: extracellular solute-binding protein family 5; KEGG: ebi:EbC_28600 oligopeptide/dipeptide ABC transporter solute-binding protein; family 5 extracellular solute-binding protein complement(1809687..1811261) Rahnella sp. Y9602 10212661 YP_004212405.1 CDS Rahaq_1659 NC_015061.1 1811405 1812055 D PFAM: protein of unknown function DUF1028; KEGG: ebi:EbC_28590 conserved uncharacterized protein; hypothetical protein 1811405..1812055 Rahnella sp. Y9602 10212662 YP_004212406.1 CDS Rahaq_1661 NC_015061.1 1812166 1812282 R hypothetical protein complement(1812166..1812282) Rahnella sp. Y9602 10212664 YP_004212407.1 CDS Rahaq_1662 NC_015061.1 1812579 1813787 R PFAM: aminotransferase class I and II; KEGG: kpe:KPK_3294 aspartate transaminase; class I and II aminotransferase complement(1812579..1813787) Rahnella sp. Y9602 10212666 YP_004212408.1 CDS Rahaq_1663 NC_015061.1 1813991 1815193 D KEGG: atu:Atu5476 CTP synthase; PFAM: glutamine amidotransferase class-I; CTP synthase 1813991..1815193 Rahnella sp. Y9602 10212667 YP_004212409.1 CDS Rahaq_1664 NC_015061.1 1815253 1816173 R PFAM: dihydrodipicolinate synthetase; KEGG: kva:Kvar_3160 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase complement(1815253..1816173) Rahnella sp. Y9602 10212668 YP_004212410.1 CDS Rahaq_1665 NC_015061.1 1816208 1817392 R PFAM: creatinase; peptidase M24; KEGG: kva:Kvar_3159 creatinase; creatinase complement(1816208..1817392) Rahnella sp. Y9602 10212669 YP_004212411.1 CDS Rahaq_1666 NC_015061.1 1817389 1818486 R PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: kva:Kvar_3158 mandelate racemase/muconate lactonizing protein; mandelate racemase/muconate lactonizing protein complement(1817389..1818486) Rahnella sp. Y9602 10212670 YP_004212412.1 CDS Rahaq_1667 NC_015061.1 1818497 1819660 R KEGG: kpe:KPK_3289 peptidase, ArgE/DapE family; TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase complement(1818497..1819660) Rahnella sp. Y9602 10212671 YP_004212413.1 CDS Rahaq_1668 NC_015061.1 1819745 1820488 R KEGG: ara:Arad_7100 general L-amino acid ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(1819745..1820488) Rahnella sp. Y9602 10212672 YP_004212414.1 CDS Rahaq_1669 NC_015061.1 1820499 1821212 R KEGG: kva:Kvar_3155 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit complement(1820499..1821212) Rahnella sp. Y9602 10212673 YP_004212415.1 CDS Rahaq_1670 NC_015061.1 1821259 1822077 R KEGG: kpe:KPK_3286 amino acid ABC transporter periplasmic amino acid-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein complement(1821259..1822077) Rahnella sp. Y9602 10212674 YP_004212416.1 CDS Rahaq_1671 NC_015061.1 1822270 1823169 D KEGG: kva:Kvar_3153 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 1822270..1823169 Rahnella sp. Y9602 10212675 YP_004212417.1 CDS Rahaq_1672 NC_015061.1 1823209 1823994 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: kpe:KPK_3284 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 1823209..1823994 Rahnella sp. Y9602 10212676 YP_004212418.1 CDS Rahaq_1673 NC_015061.1 1824344 1825270 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3129 nitrogen assimilation transcriptional regulator; LysR family transcriptional regulator 1824344..1825270 Rahnella sp. Y9602 10212677 YP_004212419.1 CDS Rahaq_1674 NC_015061.1 1825354 1825689 R KEGG: esa:ESA_03321 hypothetical protein; hypothetical protein complement(1825354..1825689) Rahnella sp. Y9602 10212678 YP_004212420.1 CDS Rahaq_1675 NC_015061.1 1825936 1826241 R PFAM: protein of unknown function DUF466; KEGG: ypb:YPTS_2225 hypothetical protein; hypothetical protein complement(1825936..1826241) Rahnella sp. Y9602 10212679 YP_004212421.1 CDS Rahaq_1676 NC_015061.1 1826234 1828300 R PFAM: carbon starvation protein CstA; KEGG: spe:Spro_2639 carbon starvation protein CstA; carbon starvation protein CstA complement(1826234..1828300) Rahnella sp. Y9602 10212680 YP_004212422.1 CDS Rahaq_1677 NC_015061.1 1828587 1829096 R PFAM: protein of unknown function Spy-related; KEGG: spe:Spro_4741 periplasmic protein; hypothetical protein complement(1828587..1829096) Rahnella sp. Y9602 10212681 YP_004212423.1 CDS Rahaq_1678 NC_015061.1 1829464 1830897 D KEGG: ypi:YpsIP31758_2122 GntR family transcriptional regulator; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 1829464..1830897 Rahnella sp. Y9602 10212682 YP_004212424.1 CDS Rahaq_1679 NC_015061.1 1830907 1831515 R PFAM: sugar isomerase (SIS); KEGG: spe:Spro_4698 sugar isomerase (SIS); sugar isomerase (SIS) complement(1830907..1831515) Rahnella sp. Y9602 10212683 YP_004212425.1 CDS Rahaq_1680 NC_015061.1 1831512 1833152 R KEGG: spe:Spro_4697 FGGY-family pentulose kinase; TIGRFAM: FGGY-family pentulose kinase; PFAM: Carbohydrate kinase, FGGY-like; FGGY-family pentulose kinase complement(1831512..1833152) Rahnella sp. Y9602 10212684 YP_004212426.1 CDS Rahaq_1681 NC_015061.1 1833182 1834135 R PFAM: inner-membrane translocator; KEGG: spe:Spro_4696 monosaccharide-transporting ATPase; inner-membrane translocator complement(1833182..1834135) Rahnella sp. Y9602 10212685 YP_004212427.1 CDS Rahaq_1682 NC_015061.1 1834137 1835126 R PFAM: inner-membrane translocator; KEGG: spe:Spro_4695 monosaccharide-transporting ATPase; inner-membrane translocator complement(1834137..1835126) Rahnella sp. Y9602 10212686 YP_004212428.1 CDS Rahaq_1683 NC_015061.1 1835119 1836657 R KEGG: spe:Spro_4694 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(1835119..1836657) Rahnella sp. Y9602 10212687 YP_004212429.1 CDS Rahaq_1684 NC_015061.1 1836927 1837913 R KEGG: ebi:EbC_31200 ribose ABC transporter periplasmic binding protein; ribose ABC transporter periplasmic binding protein complement(1836927..1837913) Rahnella sp. Y9602 10212688 YP_004212430.1 CDS Rahaq_1685 NC_015061.1 1838730 1839950 D TIGRFAM: succinylornithine transaminase family; acetylornithine and succinylornithine aminotransferase; KEGG: spe:Spro_2844 bifunctional succinylornithine transaminase/acetylornithine transaminase; PFAM: aminotransferase class-III; succinylornithine transaminase family 1838730..1839950 Rahnella sp. Y9602 10212689 YP_004212431.1 CDS Rahaq_1686 NC_015061.1 1839979 1841052 D TIGRFAM: arginine N-succinyltransferase; arginine/ornithine succinyltransferase subunit; KEGG: spe:Spro_2843 arginine succinyltransferase; PFAM: arginine N-succinyltransferase subunit beta; arginine N-succinyltransferase 1839979..1841052 Rahnella sp. Y9602 10212690 YP_004212432.1 CDS Rahaq_1687 NC_015061.1 1841049 1842527 D KEGG: spe:Spro_2842 succinylglutamic semialdehyde dehydrogenase; TIGRFAM: succinylglutamic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; succinylglutamic semialdehyde dehydrogenase 1841049..1842527 Rahnella sp. Y9602 10212691 YP_004212433.1 CDS Rahaq_1688 NC_015061.1 1842538 1843881 D TIGRFAM: succinylarginine dihydrolase; KEGG: spe:Spro_2841 succinylarginine dihydrolase; PFAM: Succinylarginine dihydrolase; succinylarginine dihydrolase 1842538..1843881 Rahnella sp. Y9602 10212692 YP_004212434.1 CDS Rahaq_1689 NC_015061.1 1843902 1844882 D TIGRFAM: succinylglutamate desuccinylase; KEGG: ypb:YPTS_2015 succinylglutamate desuccinylase; PFAM: Succinylglutamate desuccinylase/aspartoacylase; succinylglutamate desuccinylase 1843902..1844882 Rahnella sp. Y9602 10212693 YP_004212435.1 CDS Rahaq_1690 NC_015061.1 1845899 1847380 D KEGG: spe:Spro_1932 amino acid/peptide transporter; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; amino acid/peptide transporter 1845899..1847380 Rahnella sp. Y9602 10212696 YP_004212436.1 CDS Rahaq_1691 NC_015061.1 1847506 1848447 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: yen:YE2422 oxidoreductase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 1847506..1848447 Rahnella sp. Y9602 10212697 YP_004212437.1 CDS Rahaq_1692 NC_015061.1 1848516 1849256 D KEGG: spe:Spro_1934 hydrolase; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; PHP domain-containing protein 1848516..1849256 Rahnella sp. Y9602 10212698 YP_004212438.1 CDS Rahaq_1693 NC_015061.1 1849317 1849901 D KEGG: spe:Spro_1935 cytoplasmic chaperone TorD family protein; cytoplasmic chaperone TorD family protein 1849317..1849901 Rahnella sp. Y9602 10212699 YP_004212439.1 CDS Rahaq_1694 NC_015061.1 1849975 1850538 R KEGG: yen:YE2419 hypothetical protein; hypothetical protein complement(1849975..1850538) Rahnella sp. Y9602 10212700 YP_004212440.1 CDS Rahaq_1695 NC_015061.1 1850689 1851336 R KEGG: cro:ROD_11241 glutaredoxin 2; TIGRFAM: glutaredoxin, GrxB family; PFAM: glutaredoxin 2 domain protein; Glutathione S-transferase domain; GrxB family glutaredoxin complement(1850689..1851336) Rahnella sp. Y9602 10212701 YP_004212441.1 CDS Rahaq_1696 NC_015061.1 1851514 1852719 R PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE2418 multidrug resistance protein MdtH; major facilitator superfamily protein complement(1851514..1852719) Rahnella sp. Y9602 10212702 YP_004212442.1 CDS Rahaq_1697 NC_015061.1 1852932 1853519 D KEGG: spe:Spro_2795 ribosomal-protein-S5-alanine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; Ribosomal-protein-alanine N-acetyltransferase 1852932..1853519 Rahnella sp. Y9602 10212703 YP_004212443.1 CDS Rahaq_1698 NC_015061.1 1853530 1854189 D PFAM: protein of unknown function DUF480; KEGG: pwa:Pecwa_2081 hypothetical protein; hypothetical protein 1853530..1854189 Rahnella sp. Y9602 10212704 YP_004212444.1 CDS Rahaq_1699 NC_015061.1 1854202 1855113 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: spe:Spro_2793 oxidoreductase domain-containing protein; oxidoreductase domain-containing protein 1854202..1855113 Rahnella sp. Y9602 10212705 YP_004212445.1 CDS Rahaq_1700 NC_015061.1 1855307 1856842 D KEGG: yen:YE2409 hypothetical protein; TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; integral membrane protein MviN 1855307..1856842 Rahnella sp. Y9602 10212706 YP_004212446.1 CDS Rahaq_1701 NC_015061.1 1856905 1858638 R TIGRFAM: arginyl-tRNA synthetase; KEGG: spe:Spro_2791 arginyl-tRNA synthetase; arginyl-tRNA synthetase complement(1856905..1858638) Rahnella sp. Y9602 10212707 YP_004212447.1 CDS Rahaq_1702 NC_015061.1 1858865 1859425 D PFAM: protein of unknown function DUF991; KEGG: spe:Spro_2790 hypothetical protein; hypothetical protein 1858865..1859425 Rahnella sp. Y9602 10212708 YP_004212448.1 CDS Rahaq_1703 NC_015061.1 1859422 1860570 R PFAM: aminotransferase class I and II; KEGG: etr:ETAE_1428 aminotransferase class I and II; class I and II aminotransferase complement(1859422..1860570) Rahnella sp. Y9602 10212709 YP_004212449.1 CDS Rahaq_1704 NC_015061.1 1860684 1861442 D PFAM: CutC family protein; KEGG: spe:Spro_2788 copper homeostasis protein CutC; CutC family protein 1860684..1861442 Rahnella sp. Y9602 10212710 YP_004212450.1 CDS Rahaq_1705 NC_015061.1 1861611 1862114 D KEGG: ecz:ECS88_2910 conserved hypothetical protein; exported protein; hypothetical protein 1861611..1862114 Rahnella sp. Y9602 10212711 YP_004212451.1 CDS Rahaq_1706 NC_015061.1 1862174 1862290 R hypothetical protein complement(1862174..1862290) Rahnella sp. Y9602 10212712 YP_004212452.1 CDS Rahaq_1707 NC_015061.1 1862425 1862628 R KEGG: ebi:EbC_16730 hypothetical protein; hypothetical protein complement(1862425..1862628) Rahnella sp. Y9602 10212713 YP_004212453.1 CDS Rahaq_1708 NC_015061.1 1862800 1863771 R KEGG: yen:YE2402 hypothetical protein; TIGRFAM: methyltransferase; PFAM: methyltransferase; methyltransferase complement(1862800..1863771) Rahnella sp. Y9602 10212714 YP_004212454.1 CDS Rahaq_1709 NC_015061.1 1863768 1864511 R KEGG: ypb:YPTS_2092 methyltransferase; TIGRFAM: methyltransferase; PFAM: methyltransferase type 11; methyltransferase complement(1863768..1864511) Rahnella sp. Y9602 10212715 YP_004212455.1 CDS Rahaq_1710 NC_015061.1 1864648 1865043 R KEGG: ypb:YPTS_2093 hypothetical protein; hypothetical protein complement(1864648..1865043) Rahnella sp. Y9602 10212716 YP_004212456.1 CDS Rahaq_1711 NC_015061.1 1865155 1865973 R PFAM: protein of unknown function DUF72; KEGG: ypb:YPTS_2094 hypothetical protein; hypothetical protein complement(1865155..1865973) Rahnella sp. Y9602 10212717 YP_004212457.1 CDS Rahaq_1712 NC_015061.1 1866056 1866631 R PFAM: isochorismatase hydrolase; KEGG: spe:Spro_2783 hypothetical protein; isochorismatase hydrolase complement(1866056..1866631) Rahnella sp. Y9602 10212718 YP_004212458.1 CDS Rahaq_1713 NC_015061.1 1866967 1868763 D KEGG: pct:PC1_1815 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein; aspartyl-tRNA synthetase 1866967..1868763 Rahnella sp. Y9602 10212719 YP_004212459.1 CDS Rahaq_1714 NC_015061.1 1868763 1869209 D PFAM: NUDIX hydrolase; KEGG: ypb:YPTS_2096 dATP pyrophosphohydrolase; NUDIX hydrolase 1868763..1869209 Rahnella sp. Y9602 10212720 YP_004212460.1 CDS Rahaq_1715 NC_015061.1 1869235 1869978 D PFAM: protein of unknown function DUF28; KEGG: spe:Spro_2779 hypothetical protein; hypothetical protein 1869235..1869978 Rahnella sp. Y9602 10212721 YP_004212461.1 CDS Rahaq_1716 NC_015061.1 1870087 1870608 D TIGRFAM: crossover junction endodeoxyribonuclease RuvC; KEGG: dda:Dd703_2157 Holliday junction resolvase; PFAM: Crossover junction endodeoxyribonuclease RuvC; crossover junction endodeoxyribonuclease RuvC 1870087..1870608 Rahnella sp. Y9602 10212722 YP_004212462.1 CDS Rahaq_1717 NC_015061.1 1870696 1871310 D TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; KEGG: spe:Spro_2777 Holliday junction DNA helicase RuvA; SMART: Helix-hairpin-helix DNA-binding class 1; Holliday junction DNA helicase RuvA 1870696..1871310 Rahnella sp. Y9602 10212723 YP_004212463.1 CDS Rahaq_1718 NC_015061.1 1871319 1872326 D TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase; Holliday junction DNA helicase RuvB domain; KEGG: spe:Spro_2776 Holliday junction DNA helicase RuvB; SMART: AAA ATPase; Holliday junction DNA helicase RuvB 1871319..1872326 Rahnella sp. Y9602 10212724 YP_004212464.1 CDS Rahaq_1719 NC_015061.1 1872373 1873695 R PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein; transposase IS4 family protein complement(1872373..1873695) Rahnella sp. Y9602 10212725 YP_004212465.1 CDS Rahaq_1720 NC_015061.1 1873815 1876193 R PFAM: glycoside hydrolase family 3 domain protein; KEGG: esa:ESA_02100 hypothetical protein; glycoside hydrolase complement(1873815..1876193) Rahnella sp. Y9602 10212726 YP_004212466.1 CDS Rahaq_1721 NC_015061.1 1876190 1877602 R KEGG: enc:ECL_02391 symporter; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; sugar (Glycoside-Pentoside-Hexuronide) transporter complement(1876190..1877602) Rahnella sp. Y9602 10212727 YP_004212467.1 CDS Rahaq_1722 NC_015061.1 1877901 1878800 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: asa:ASA_1608 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1877901..1878800) Rahnella sp. Y9602 10212728 YP_004212468.1 CDS Rahaq_1723 NC_015061.1 1878919 1879692 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: asa:ASA_1609 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1878919..1879692 Rahnella sp. Y9602 10212729 YP_004212469.1 CDS Rahaq_1724 NC_015061.1 1879997 1881871 D TIGRFAM: PTS system, beta-glucoside-specific IIABC subunit; PTS system, glucose-like IIB subunint; PTS system, glucose subfamily, IIA subunit; KEGG: eca:ECA1870 PTS system beta-glucoside-specific transporter subunits IIABC; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; PTS system beta-glucoside-specific transporter subunit IIABC 1879997..1881871 Rahnella sp. Y9602 10212730 YP_004212470.1 CDS Rahaq_1725 NC_015061.1 1881894 1883291 D PFAM: glycoside hydrolase family 1; KEGG: pct:PC1_2438 glycoside hydrolase family 1; glycoside hydrolase 1881894..1883291 Rahnella sp. Y9602 10212731 YP_004212471.1 CDS Rahaq_1726 NC_015061.1 1883460 1884308 D PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: ent:Ent638_2741 transcriptional antiterminator, BglG; transcriptional antiterminator BglG 1883460..1884308 Rahnella sp. Y9602 10212732 YP_004212472.1 CDS Rahaq_1727 NC_015061.1 1884539 1886020 D PFAM: amino acid permease-associated region; KEGG: spe:Spro_1347 amino acid permease-associated region; amino acid permease 1884539..1886020 Rahnella sp. Y9602 10212733 YP_004212473.1 CDS Rahaq_1728 NC_015061.1 1886155 1886352 D KEGG: eta:ETA_25860 hypothetical protein; hypothetical protein 1886155..1886352 Rahnella sp. Y9602 10212734 YP_004212474.1 CDS Rahaq_1729 NC_015061.1 1886352 1887158 D KEGG: eta:ETA_25870 hypothetical protein; hypothetical protein 1886352..1887158 Rahnella sp. Y9602 10212735 YP_004212475.1 CDS Rahaq_1730 NC_015061.1 1887179 1887868 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pfs:PFLU2602 fumarylpyruvate hydrolase; fumarylacetoacetate (FAA) hydrolase complement(1887179..1887868) Rahnella sp. Y9602 10212736 YP_004212476.1 CDS Rahaq_1731 NC_015061.1 1887961 1888755 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mms:mma_1110 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(1887961..1888755) Rahnella sp. Y9602 10212737 YP_004212477.1 CDS Rahaq_1732 NC_015061.1 1888869 1889315 D PFAM: helix-turn-helix HxlR type; KEGG: kva:Kvar_3353 transcriptional regulator, HxlR family; HxlR family transcriptional regulator 1888869..1889315 Rahnella sp. Y9602 10212738 YP_004212478.1 CDS Rahaq_1733 NC_015061.1 1889494 1891521 R KEGG: vei:Veis_0413 peptidase S15; TIGRFAM: hydrolase CocE/NonD family protein; PFAM: X-Pro dipeptidyl-peptidase domain protein; hydrolase complement(1889494..1891521) Rahnella sp. Y9602 10212739 YP_004212479.1 CDS Rahaq_1734 NC_015061.1 1891518 1893161 R KEGG: vei:Veis_0412 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(1891518..1893161) Rahnella sp. Y9602 10212740 YP_004212480.1 CDS Rahaq_1735 NC_015061.1 1893158 1893985 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0411 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1893158..1893985) Rahnella sp. Y9602 10212741 YP_004212481.1 CDS Rahaq_1736 NC_015061.1 1893997 1894944 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0410 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1893997..1894944) Rahnella sp. Y9602 10212742 YP_004212482.1 CDS Rahaq_1737 NC_015061.1 1894944 1896527 R PFAM: extracellular solute-binding protein family 5; KEGG: vei:Veis_0409 extracellular solute-binding protein; family 5 extracellular solute-binding protein complement(1894944..1896527) Rahnella sp. Y9602 10212743 YP_004212483.1 CDS Rahaq_1738 NC_015061.1 1896747 1897028 D KEGG: oan:Oant_2780 hypothetical protein; hypothetical protein 1896747..1897028 Rahnella sp. Y9602 10212744 YP_004212484.1 CDS Rahaq_1739 NC_015061.1 1897148 1898038 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: abn:AB57_2845 glycine cleavage system transcriptional activator; LysR family transcriptional regulator complement(1897148..1898038) Rahnella sp. Y9602 10212745 YP_004212485.1 CDS Rahaq_1740 NC_015061.1 1898064 1899482 R KEGG: spe:Spro_1440 transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(1898064..1899482) Rahnella sp. Y9602 10212746 YP_004212486.1 CDS Rahaq_1741 NC_015061.1 1899651 1899923 D KEGG: pde:Pden_3345 hypothetical protein; hypothetical protein 1899651..1899923 Rahnella sp. Y9602 10212747 YP_004212487.1 CDS Rahaq_1742 NC_015061.1 1900068 1902098 R KEGG: spe:Spro_1573 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, subunit beta; PFAM: tRNA synthetase class I (M); t-RNA-binding domain-containing protein; methionyl-tRNA synthetase complement(1900068..1902098) Rahnella sp. Y9602 10212748 YP_004212488.1 CDS Rahaq_1743 NC_015061.1 1902251 1903363 D PFAM: ATPase-like, ParA/MinD; KEGG: spe:Spro_1574 ATPase; ParA/MinD-like ATPase 1902251..1903363 Rahnella sp. Y9602 10212749 YP_004212489.1 CDS Rahaq_1744 NC_015061.1 1903510 1904151 D TIGRFAM: uridine kinase; KEGG: sbo:SBO_0893 uridine kinase; uridine kinase 1903510..1904151 Rahnella sp. Y9602 10212750 YP_004212490.1 CDS Rahaq_1745 NC_015061.1 1904189 1904770 D KEGG: yen:YE2782 deoxycytidine triphosphate deaminase; TIGRFAM: deoxycytidine triphosphate deaminase; PFAM: deoxyUTP pyrophosphatase; deoxycytidine triphosphate deaminase 1904189..1904770 Rahnella sp. Y9602 10212751 YP_004212491.1 CDS Rahaq_1746 NC_015061.1 1904814 1906664 D PFAM: AsmA family protein; KEGG: spe:Spro_1578 assembly protein; AsmA family protein 1904814..1906664 Rahnella sp. Y9602 10212752 YP_004212492.1 CDS Rahaq_1747 NC_015061.1 1906743 1908332 R PFAM: Integral membrane protein TerC; CBS domain containing protein; transporter-associated region; KEGG: ypy:YPK_2549 integral membrane protein TerC; integral membrane protein TerC complement(1906743..1908332) Rahnella sp. Y9602 10212753 YP_004212493.1 CDS Rahaq_1748 NC_015061.1 1908795 1909682 D KEGG: yen:YE2778 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; UTP-glucose-1-phosphate uridylyltransferase 1908795..1909682 Rahnella sp. Y9602 10212754 YP_004212494.1 CDS Rahaq_1749 NC_015061.1 1910162 1911226 D KEGG: yen:YE0173 dTDP-D-glucose-4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-glucose 4,6-dehydratase 1910162..1911226 Rahnella sp. Y9602 10212755 YP_004212495.1 CDS Rahaq_1750 NC_015061.1 1911246 1912115 D TIGRFAM: glucose-1-phosphate thymidylyltransferase; KEGG: eca:ECA1442 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate thymidylyltransferase 1911246..1912115 Rahnella sp. Y9602 10212756 YP_004212496.1 CDS Rahaq_1751 NC_015061.1 1912535 1913461 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: eay:EAM_2158 UDP-glucose epimerase; NAD-dependent epimerase/dehydratase 1912535..1913461 Rahnella sp. Y9602 10212757 YP_004212497.1 CDS Rahaq_1752 NC_015061.1 1913568 1914335 D PFAM: ABC transporter; KEGG: epy:EpC_14020 O-antigen ABC transporter permease; ABC transporter 1913568..1914335 Rahnella sp. Y9602 10212758 YP_004212498.1 CDS Rahaq_1753 NC_015061.1 1914335 1915075 D KEGG: eay:EAM_2156 O-antigen export system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1914335..1915075 Rahnella sp. Y9602 10212759 YP_004212499.1 CDS Rahaq_1754 NC_015061.1 1915110 1917002 D PFAM: glycosyl transferase family 8; KEGG: eta:ETA_13400 glycosyl transferase; glycosyl transferase family protein 1915110..1917002 Rahnella sp. Y9602 10212760 YP_004212500.1 CDS Rahaq_1755 NC_015061.1 1917016 1918170 D TIGRFAM: UDP-galactopyranose mutase; KEGG: eay:EAM_2154 UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like; FAD dependent oxidoreductase; UDP-galactopyranose mutase 1917016..1918170 Rahnella sp. Y9602 10212761 YP_004212501.1 CDS Rahaq_1756 NC_015061.1 1918167 1919063 D PFAM: glycosyl transferase family 2; KEGG: epy:EpC_14060 glycosyl transferase; family 2 glycosyl transferase 1918167..1919063 Rahnella sp. Y9602 10212762 YP_004212502.1 CDS Rahaq_1757 NC_015061.1 1919077 1920219 D PFAM: glycosyl transferase group 1; KEGG: ecm:EcSMS35_2263 glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 1919077..1920219 Rahnella sp. Y9602 10212763 YP_004212503.1 CDS Rahaq_1758 NC_015061.1 1920239 1921507 D KEGG: gbr:Gbro_2791 hypothetical protein; hypothetical protein 1920239..1921507 Rahnella sp. Y9602 10212764 YP_004212504.1 CDS Rahaq_1759 NC_015061.1 1921774 1923183 D TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; KEGG: ypb:YPTS_1663 6-phosphogluconate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase domain-containing protein; 6-phosphogluconate dehydrogenase NAD-binding; 6-phosphogluconate dehydrogenase 1921774..1923183 Rahnella sp. Y9602 10212765 YP_004212505.1 CDS Rahaq_1760 NC_015061.1 1923301 1923942 R KEGG: yen:YE2772 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like; phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP diphosphatase complement(1923301..1923942) Rahnella sp. Y9602 10212766 YP_004212506.1 CDS Rahaq_1761 NC_015061.1 1923939 1924712 R KEGG: eok:G2583_2546 imidazole glycerol phosphate synthase subunit HisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; Imidazole glycerol phosphate synthase cyclase subunit complement(1923939..1924712) Rahnella sp. Y9602 10212767 YP_004212507.1 CDS Rahaq_1762 NC_015061.1 1924694 1925431 R TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: spe:Spro_1611 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: histidine biosynthesis protein; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase complement(1924694..1925431) Rahnella sp. Y9602 10212768 YP_004212508.1 CDS Rahaq_1763 NC_015061.1 1925437 1926027 R KEGG: spe:Spro_1612 imidazole glycerol phosphate synthase subunit HisH; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit complement(1925437..1926027) Rahnella sp. Y9602 10212769 YP_004212509.1 CDS Rahaq_1764 NC_015061.1 1926027 1927109 R TIGRFAM: histidinol-phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: yen:YE2768 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; PFAM: imidazoleglycerol-phosphate dehydratase; histidinol-phosphatase complement(1926027..1927109) Rahnella sp. Y9602 10212770 YP_004212510.1 CDS Rahaq_1765 NC_015061.1 1927106 1928239 R KEGG: spe:Spro_1614 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; histidinol-phosphate aminotransferase complement(1927106..1928239) Rahnella sp. Y9602 10212771 YP_004212511.1 CDS Rahaq_1766 NC_015061.1 1928239 1929552 R TIGRFAM: histidinol dehydrogenase; KEGG: ddd:Dda3937_02973 bifunctional histidinal dehydrogenase/histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; histidinol dehydrogenase complement(1928239..1929552) Rahnella sp. Y9602 10212772 YP_004212512.1 CDS Rahaq_1767 NC_015061.1 1929556 1930455 R TIGRFAM: ATP phosphoribosyltransferase; KEGG: spe:Spro_1616 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region; Histidine biosynthesis protein HisG domain; ATP phosphoribosyltransferase complement(1929556..1930455) Rahnella sp. Y9602 10212773 YP_004212513.1 CDS Rahaq_1768 NC_015061.1 1930981 1931805 D PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: spe:Spro_1617 NAD-dependent epimerase/dehydratase; 6-phosphogluconate dehydrogenase 1930981..1931805 Rahnella sp. Y9602 10212774 YP_004212514.1 CDS Rahaq_1769 NC_015061.1 1932212 1932358 R hypothetical protein complement(1932212..1932358) Rahnella sp. Y9602 10212775 YP_004212515.1 CDS Rahaq_1770 NC_015061.1 1933068 1933412 D PFAM: flagellar transcriptional activator; KEGG: spe:Spro_2989 transcriptional activator FlhD; flagellar transcriptional activator 1933068..1933412 Rahnella sp. Y9602 10212776 YP_004212516.1 CDS Rahaq_1771 NC_015061.1 1933415 1934023 D PFAM: flagellar transcriptional activator FlhC; KEGG: spe:Spro_2988 transcriptional activator FlhC; flagellar transcriptional activator FlhC 1933415..1934023 Rahnella sp. Y9602 10212777 YP_004212517.1 CDS Rahaq_1772 NC_015061.1 1934200 1935090 D KEGG: ypb:YPTS_2486 flagellar motor protein MotA; flagellar motor protein MotA 1934200..1935090 Rahnella sp. Y9602 10212778 YP_004212518.1 CDS Rahaq_1773 NC_015061.1 1935087 1936190 D PFAM: OmpA/MotB domain protein; KEGG: ypb:YPTS_2485 flagellar motor protein MotB; OmpA/MotB domain-containing protein 1935087..1936190 Rahnella sp. Y9602 10212779 YP_004212519.1 CDS Rahaq_1774 NC_015061.1 1936221 1938263 D KEGG: yen:YE2577 chemotaxis protein CheA; PFAM: CheY binding protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; ATP-binding region ATPase domain protein; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; CheA signal transduction histidine kinase 1936221..1938263 Rahnella sp. Y9602 10212780 YP_004212520.1 CDS Rahaq_1775 NC_015061.1 1938346 1938843 D KEGG: ypb:YPTS_2483 purine-binding chemotaxis protein; PFAM: CheW domain protein; SMART: CheW domain protein; chemotaxis protein CheW 1938346..1938843 Rahnella sp. Y9602 10212781 YP_004212521.1 CDS Rahaq_1776 NC_015061.1 1939445 1940590 R PFAM: lambda integrase ; integrase family protein; KEGG: kpe:KPK_2863 site-specific recombinase, phage integrase family; lambda integrase complement(1939445..1940590) Rahnella sp. Y9602 10212782 YP_004212522.1 CDS Rahaq_1777 NC_015061.1 1940571 1940828 R KEGG: kpe:KPK_2862 hypothetical protein; hypothetical protein complement(1940571..1940828) Rahnella sp. Y9602 10212783 YP_004212523.1 CDS Rahaq_1778 NC_015061.1 1941167 1941994 R PFAM: Protein of unknown function DUF2303; KEGG: pmr:PMI0900 prophage protein; hypothetical protein complement(1941167..1941994) Rahnella sp. Y9602 10212784 YP_004212524.1 CDS Rahaq_1779 NC_015061.1 1942030 1942401 R KEGG: pmr:PMI0901 prophage protein; prophage protein complement(1942030..1942401) Rahnella sp. Y9602 10212785 YP_004212525.1 CDS Rahaq_1780 NC_015061.1 1942471 1942626 R KEGG: eoh:ECO103_2405 TciB/TerA-like protein; TciB/TerA-like protein complement(1942471..1942626) Rahnella sp. Y9602 10212786 YP_004212526.1 CDS Rahaq_1781 NC_015061.1 1942623 1943048 R KEGG: ecy:ECSE_1671 hypothetical protein; hypothetical protein complement(1942623..1943048) Rahnella sp. Y9602 10212787 YP_004212527.1 CDS Rahaq_1782 NC_015061.1 1943519 1944187 R PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: ect:ECIAI39_4853 repressor protein phage E14; E14 prophage; Peptidase S24/S26A/S26B complement(1943519..1944187) Rahnella sp. Y9602 10212788 YP_004212528.1 CDS Rahaq_1783 NC_015061.1 1944273 1944491 D KEGG: ecj:JW5169 predicted DNA-binding transcriptional regulator; DNA-binding transcriptional regulator 1944273..1944491 Rahnella sp. Y9602 10212789 YP_004212529.1 CDS Rahaq_1784 NC_015061.1 1944520 1945053 D KEGG: eum:ECUMN_0869 nucleic acid-binding protein; E14 prophage; nucleic acid-binding protein; E14 prophage 1944520..1945053 Rahnella sp. Y9602 10212790 YP_004212530.1 CDS Rahaq_1785 NC_015061.1 1945061 1945255 D KEGG: ppw:PputW619_2168 peptidase S8/S53 subtilisin kexin sedolisin; hypothetical protein 1945061..1945255 Rahnella sp. Y9602 10212791 YP_004212531.1 CDS Rahaq_1786 NC_015061.1 1945259 1946266 D KEGG: cro:ROD_26171 hypothetical protein; hypothetical protein 1945259..1946266 Rahnella sp. Y9602 10212792 YP_004212532.1 CDS Rahaq_1787 NC_015061.1 1946263 1947204 D PFAM: MT-A70 family protein; KEGG: yen:YE2361 adenine-specific modification methylase; MT-A70 family protein 1946263..1947204 Rahnella sp. Y9602 10212793 YP_004212533.1 CDS Rahaq_1788 NC_015061.1 1947201 1949198 D PFAM: C-5 cytosine-specific DNA methylase; KEGG: cro:ROD_26151 prophage DNA cytosine methylase; C-5 cytosine-specific DNA methylase 1947201..1949198 Rahnella sp. Y9602 10212794 YP_004212534.1 CDS Rahaq_1789 NC_015061.1 1949195 1949356 D hypothetical protein 1949195..1949356 Rahnella sp. Y9602 10212795 YP_004212535.1 CDS Rahaq_1790 NC_015061.1 1949347 1949721 D PFAM: endodeoxyribonuclease RusA; KEGG: sec:SC1203 crossover junction endodeoxyribonuclease; endodeoxyribonuclease RusA 1949347..1949721 Rahnella sp. Y9602 10212796 YP_004212536.1 CDS Rahaq_1791 NC_015061.1 1949736 1950431 D PFAM: phage antirepressor protein; Phage regulatory protein, Rha-like; KEGG: pmr:PMI0910 phage antirepressor; phage antirepressor protein 1949736..1950431 Rahnella sp. Y9602 10212797 YP_004212537.1 CDS Rahaq_1792 NC_015061.1 1950428 1951441 D SMART: HNH nuclease; KEGG: epy:EpC_20670 conserved uncharacterized protein; HNH nuclease 1950428..1951441 Rahnella sp. Y9602 10212798 YP_004212538.1 CDS Rahaq_1793 NC_015061.1 1951458 1951856 D PFAM: antitermination Q family protein; KEGG: ecr:ECIAI1_2652 antitermination protein Q (P5); antitermination Q family protein 1951458..1951856 Rahnella sp. Y9602 10212799 YP_004212539.1 CDS Rahaq_1794 NC_015061.1 1951946 1952227 D KEGG: tte:TTE1424 flagellar biosynthesis protein FliR; hypothetical protein 1951946..1952227 Rahnella sp. Y9602 10212800 YP_004212540.1 CDS Rahaq_1795 NC_015061.1 1952513 1952764 D KEGG: eic:NT01EI_1431 hypothetical protein; hypothetical protein 1952513..1952764 Rahnella sp. Y9602 10212801 YP_004212541.1 CDS Rahaq_1796 NC_015061.1 1953368 1953637 D KEGG: sew:SeSA_A0628 bacteriophage protein; bacteriophage protein 1953368..1953637 Rahnella sp. Y9602 10212802 YP_004212542.1 CDS Rahaq_1797 NC_015061.1 1953639 1954169 D KEGG: sgl:SG1681 phage lysozyme lysis protein; PFAM: glycoside hydrolase family 24; lysozyme 1953639..1954169 Rahnella sp. Y9602 10212803 YP_004212543.1 CDS Rahaq_1798 NC_015061.1 1954162 1954668 D PFAM: lysis protein; KEGG: xbo:XBJ1_1386 endopeptidase; lysis protein 1954162..1954668 Rahnella sp. Y9602 10212804 YP_004212544.1 CDS Rahaq_1799 NC_015061.1 1954769 1954978 D KEGG: pam:PANA_1758 hypothetical protein; hypothetical protein 1954769..1954978 Rahnella sp. Y9602 10212805 YP_004212545.1 CDS Rahaq_1800 NC_015061.1 1955050 1955547 D KEGG: vpo:Kpol_1069p15 hypothetical protein; hypothetical protein 1955050..1955547 Rahnella sp. Y9602 10212806 YP_004212546.1 CDS Rahaq_1801 NC_015061.1 1955569 1955685 R hypothetical protein complement(1955569..1955685) Rahnella sp. Y9602 10212807 YP_004212547.1 CDS Rahaq_1802 NC_015061.1 1955860 1956279 D KEGG: ent:Ent638_2245 hypothetical protein; hypothetical protein 1955860..1956279 Rahnella sp. Y9602 10212808 YP_004212548.1 CDS Rahaq_1803 NC_015061.1 1956314 1956493 R manually curated; KEGG: sed:SeD_A0651 hypothetical protein; hypothetical protein complement(1956314..1956493) Rahnella sp. Y9602 10212809 YP_004212549.1 CDS Rahaq_1804 NC_015061.1 1956602 1956955 D manually curated; PFAM: HNH endonuclease; KEGG: ctu:Ctu_17410 hypothetical protein; SMART: HNH nuclease; HNH endonuclease 1956602..1956955 Rahnella sp. Y9602 10212810 YP_004212550.1 CDS Rahaq_1805 NC_015061.1 1957100 1957573 D TIGRFAM: phage terminase, small subunit, , P27 family; KEGG: ctu:Ctu_17430 hypothetical protein; phage terminase, small subunit, , P27 family 1957100..1957573 Rahnella sp. Y9602 10212811 YP_004212551.1 CDS Rahaq_1806 NC_015061.1 1957577 1959307 D PFAM: Terminase; KEGG: esa:ESA_01025 hypothetical protein; terminase 1957577..1959307 Rahnella sp. Y9602 10212812 YP_004212552.1 CDS Rahaq_1807 NC_015061.1 1959307 1960611 D KEGG: sew:SeSA_A4463 phage portal protein, HK97 family; TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; phage portal protein, HK97 family 1959307..1960611 Rahnella sp. Y9602 10212813 YP_004212553.1 CDS Rahaq_1808 NC_015061.1 1960622 1961470 D PFAM: peptidase S14 ClpP; KEGG: esa:ESA_01027 hypothetical protein; peptidase S14 ClpP 1960622..1961470 Rahnella sp. Y9602 10212814 YP_004212554.1 CDS Rahaq_1809 NC_015061.1 1961480 1962694 D KEGG: ctu:Ctu_17470 hypothetical protein; hypothetical protein 1961480..1962694 Rahnella sp. Y9602 10212815 YP_004212555.1 CDS Rahaq_1810 NC_015061.1 1962754 1963098 D KEGG: ctu:Ctu_17490 hypothetical protein; hypothetical protein 1962754..1963098 Rahnella sp. Y9602 10212816 YP_004212556.1 CDS Rahaq_1811 NC_015061.1 1963109 1963447 D TIGRFAM: phage head-tail adaptor; KEGG: ent:Ent638_2233 phage head-tail adaptor; phage head-tail adaptor 1963109..1963447 Rahnella sp. Y9602 10212817 YP_004212557.1 CDS Rahaq_1812 NC_015061.1 1963444 1963890 D TIGRFAM: phage protein, HK97 gp10 family; KEGG: esa:ESA_01032 hypothetical protein; phage protein, HK97 gp10 family 1963444..1963890 Rahnella sp. Y9602 10212818 YP_004212558.1 CDS Rahaq_1813 NC_015061.1 1963887 1964234 D KEGG: ent:Ent638_2231 hypothetical protein; hypothetical protein 1963887..1964234 Rahnella sp. Y9602 10212819 YP_004212559.1 CDS Rahaq_1814 NC_015061.1 1964290 1964760 D KEGG: ent:Ent638_2230 phage major tail subunit; phage major tail subunit 1964290..1964760 Rahnella sp. Y9602 10212820 YP_004212560.1 CDS Rahaq_1815 NC_015061.1 1964817 1965215 D PFAM: tail assembly chaperone; KEGG: ent:Ent638_2229 phage tail assembly chaperone; tail assembly chaperone 1964817..1965215 Rahnella sp. Y9602 10212821 YP_004212561.1 CDS Rahaq_1816 NC_015061.1 1965224 1965502 D manually curated; KEGG: ctu:Ctu_17550 hypothetical protein; hypothetical protein 1965224..1965502 Rahnella sp. Y9602 10212822 YP_004212562.1 CDS Rahaq_1817 NC_015061.1 1965534 1968818 D manually curated; TIGRFAM: phage tail tape measure protein, lambda family; phage tape measure protein; KEGG: ent:Ent638_2225 lambda family phage tail tape measure protein; PFAM: Tail length tape measure; phage tail tape measure protein, lambda family 1965534..1968818 Rahnella sp. Y9602 10212823 YP_004212563.1 CDS Rahaq_1818 NC_015061.1 1968822 1969160 D PFAM: minor tail family protein; KEGG: ent:Ent638_2224 phage minor tail family protein; minor tail family protein 1968822..1969160 Rahnella sp. Y9602 10212824 YP_004212564.1 CDS Rahaq_1819 NC_015061.1 1969157 1970812 D KEGG: ent:Ent638_2223 phage minor tail protein L; TIGRFAM: phage minor tail protein L; PFAM: minor tail protein L; phage minor tail protein L 1969157..1970812 Rahnella sp. Y9602 10212825 YP_004212565.1 CDS Rahaq_1820 NC_015061.1 1970815 1971534 D KEGG: enc:ECL_01713 GP19; PFAM: NLP/P60 protein; SMART: Mov34/MPN/PAD-1 family protein; NLP/P60 protein 1970815..1971534 Rahnella sp. Y9602 10212826 YP_004212566.1 CDS Rahaq_1821 NC_015061.1 1971537 1972142 D PFAM: lambda tail assembly I; KEGG: ent:Ent638_2220 bacteriophage lambda tail assembly I; lambda tail assembly I 1971537..1972142 Rahnella sp. Y9602 10212827 YP_004212567.1 CDS Rahaq_1822 NC_015061.1 1972202 1975381 D PFAM: protein of unknown function DUF1983; Fibronectin type III domain protein; KEGG: ent:Ent638_2219 fibronectin, type III domain-containing protein; hypothetical protein 1972202..1975381 Rahnella sp. Y9602 10212828 YP_004212568.1 CDS Rahaq_1823 NC_015061.1 1975381 1976391 D KEGG: sgl:SG1641 hypothetical protein; hypothetical protein 1975381..1976391 Rahnella sp. Y9602 10212829 YP_004212569.1 CDS Rahaq_1824 NC_015061.1 1976467 1977747 D KEGG: ent:Ent638_2216 hypothetical protein; hypothetical protein 1976467..1977747 Rahnella sp. Y9602 10212830 YP_004212570.1 CDS Rahaq_1825 NC_015061.1 1977908 1978984 R PFAM: acyltransferase 3; KEGG: ecr:ECIAI1_2620 O-acyltransferase, transmembrane; acyltransferase complement(1977908..1978984) Rahnella sp. Y9602 10212831 YP_004212571.1 CDS Rahaq_1826 NC_015061.1 1980028 1981041 R KEGG: azl:AZL_016110 transcriptional regulator; PFAM: ThiJ/PfpI domain-containing protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(1980028..1981041) Rahnella sp. Y9602 10212832 YP_004212572.1 CDS Rahaq_1827 NC_015061.1 1981156 1982631 D PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2353 major facilitator transporter; major facilitator superfamily protein 1981156..1982631 Rahnella sp. Y9602 10212833 YP_004212573.1 CDS Rahaq_1828 NC_015061.1 1982830 1983126 D KEGG: eca:ECA0275 hypothetical protein; hypothetical protein 1982830..1983126 Rahnella sp. Y9602 10212834 YP_004212574.1 CDS Rahaq_1829 NC_015061.1 1983135 1983728 D KEGG: pct:PC1_0259 hypothetical protein; hypothetical protein 1983135..1983728 Rahnella sp. Y9602 10212835 YP_004212575.1 CDS Rahaq_1830 NC_015061.1 1983825 1985519 D KEGG: spe:Spro_2983 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 1983825..1985519 Rahnella sp. Y9602 10212836 YP_004212576.1 CDS Rahaq_1831 NC_015061.1 1985641 1987311 D KEGG: spe:Spro_2982 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 1985641..1987311 Rahnella sp. Y9602 10212837 YP_004212577.1 CDS Rahaq_1832 NC_015061.1 1987374 1988246 D PFAM: MCP methyltransferase CheR-type; KEGG: dda:Dd703_1515 chemotaxis methyltransferase CheR; SMART: MCP methyltransferase CheR-type; chemotaxis protein CheR 1987374..1988246 Rahnella sp. Y9602 10212838 YP_004212578.1 CDS Rahaq_1833 NC_015061.1 1988246 1989295 D PFAM: CheB methylesterase; response regulator receiver; KEGG: spe:Spro_2980 chemotaxis-specific methylesterase; SMART: response regulator receiver; response regulator receiver modulated CheB methylesterase 1988246..1989295 Rahnella sp. Y9602 10212839 YP_004212579.1 CDS Rahaq_1834 NC_015061.1 1989342 1989731 D KEGG: epy:EpC_15450 chemotaxis regulatory protein CheY; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 1989342..1989731 Rahnella sp. Y9602 10212840 YP_004212580.1 CDS Rahaq_1835 NC_015061.1 1989742 1990386 D PFAM: Chemotaxis phosphatase CheZ; KEGG: spe:Spro_2978 chemotaxis regulator CheZ; chemotaxis protein CheZ 1989742..1990386 Rahnella sp. Y9602 10212841 YP_004212581.1 CDS Rahaq_1836 NC_015061.1 1990712 1991866 D KEGG: yen:YE2567 flagellar biosynthesis protein FlhB; TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; flagellar biosynthetic protein FlhB 1990712..1991866 Rahnella sp. Y9602 10212842 YP_004212582.1 CDS Rahaq_1837 NC_015061.1 1991859 1993943 D KEGG: yen:YE2566 flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; flagellar biosynthesis protein FlhA 1991859..1993943 Rahnella sp. Y9602 10212843 YP_004212583.1 CDS Rahaq_1838 NC_015061.1 1993945 1994361 D PFAM: flagellar FlhE family protein; KEGG: enc:ECL_01420 flagellar FlhE family protein; flagellar FlhE family protein 1993945..1994361 Rahnella sp. Y9602 10212844 YP_004212584.1 CDS Rahaq_1839 NC_015061.1 1994648 1995157 R KEGG: sit:TM1040_3121 hypothetical protein; hypothetical protein complement(1994648..1995157) Rahnella sp. Y9602 10212845 YP_004212585.1 CDS Rahaq_1840 NC_015061.1 1995624 1996076 R PFAM: FlgN family protein; KEGG: spe:Spro_2973 FlgN family protein; FlgN family protein complement(1995624..1996076) Rahnella sp. Y9602 10212846 YP_004212586.1 CDS Rahaq_1841 NC_015061.1 1996126 1996428 R KEGG: pam:PANA_1462 FlgM; TIGRFAM: Anti-sigma-28 factor FlgM family protein; PFAM: Anti-sigma-28 factor FlgM family protein; anti-sigma-28 factor FlgM family protein complement(1996126..1996428) Rahnella sp. Y9602 10212847 YP_004212587.1 CDS Rahaq_1842 NC_015061.1 1996588 1997370 R KEGG: spe:Spro_2971 SAF domain-containing protein; TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; flagella basal body P-ring formation protein FlgA complement(1996588..1997370) Rahnella sp. Y9602 10212848 YP_004212588.1 CDS Rahaq_1843 NC_015061.1 1997484 1997894 D KEGG: yen:YE2560 flagellar basal body rod protein FlgB; TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; flagellar basal-body rod protein FlgB 1997484..1997894 Rahnella sp. Y9602 10212849 YP_004212589.1 CDS Rahaq_1844 NC_015061.1 1997901 1998305 D KEGG: yen:YE2559 flagellar basal body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal-body rod protein FlgC 1997901..1998305 Rahnella sp. Y9602 10212850 YP_004212590.1 CDS Rahaq_1845 NC_015061.1 1998317 1999021 D PFAM: flagellar hook capping protein; KEGG: esa:ESA_02272 flagellar basal body rod modification protein; flagellar hook capping protein 1998317..1999021 Rahnella sp. Y9602 10212851 YP_004212591.1 CDS Rahaq_1846 NC_015061.1 1999099 2000343 D KEGG: yen:YE2557 flagellar hook protein FlgE; TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body FlaE domain protein; flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar hook-basal body protein 1999099..2000343 Rahnella sp. Y9602 10212852 YP_004212592.1 CDS Rahaq_1847 NC_015061.1 2000378 2001133 D KEGG: spe:Spro_2966 flagellar basal body rod protein FlgF; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body protein; PFAM: flagellar basal body rod protein; flagellar basal-body rod protein FlgF 2000378..2001133 Rahnella sp. Y9602 10212853 YP_004212593.1 CDS Rahaq_1848 NC_015061.1 2001155 2001937 D KEGG: ypy:YPK_2420 flagellar basal body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar basal-body rod protein FlgG 2001155..2001937 Rahnella sp. Y9602 10212854 YP_004212594.1 CDS Rahaq_1849 NC_015061.1 2002038 2002769 D PFAM: flagellar L-ring protein; KEGG: ypb:YPTS_1805 flagellar basal body L-ring protein; flagellar L-ring protein 2002038..2002769 Rahnella sp. Y9602 10212855 YP_004212595.1 CDS Rahaq_1850 NC_015061.1 2002780 2003886 D PFAM: flagellar P-ring protein; KEGG: spe:Spro_2963 flagellar basal body P-ring protein; flagellar P-ring protein 2002780..2003886 Rahnella sp. Y9602 10212856 YP_004212596.1 CDS Rahaq_1851 NC_015061.1 2003886 2004836 D TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Flagellar protein FlgJ-like; KEGG: yen:YE2552 flagellar rod assembly protein/muramidase FlgJ; SMART: lysozyme subfamily 2; flagellar rod assembly protein/muramidase FlgJ 2003886..2004836 Rahnella sp. Y9602 10212857 YP_004212597.1 CDS Rahaq_1852 NC_015061.1 2004977 2006629 D KEGG: yen:YE2551 flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar hook-associated protein FlgK 2004977..2006629 Rahnella sp. Y9602 10212858 YP_004212598.1 CDS Rahaq_1853 NC_015061.1 2006657 2007619 D KEGG: ctu:Ctu_16600 flagellar hook-associated protein FlgL; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; flagellar hook-associated protein 3 2006657..2007619 Rahnella sp. Y9602 10212859 YP_004212599.1 CDS Rahaq_1854 NC_015061.1 2007924 2008619 R PFAM: LrgB family protein; KEGG: yen:YE2791 hypothetical protein; LrgB family protein complement(2007924..2008619) Rahnella sp. Y9602 10212860 YP_004212600.1 CDS Rahaq_1855 NC_015061.1 2008612 2009016 R PFAM: LrgA family protein; KEGG: etr:ETAE_1164 hypothetical protein; LrgA family protein complement(2008612..2009016) Rahnella sp. Y9602 10212861 YP_004212601.1 CDS Rahaq_1856 NC_015061.1 2009376 2010221 R KEGG: kpu:KP1_2958 amino acid ABC transport system ATP-binding component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(2009376..2010221) Rahnella sp. Y9602 10212862 YP_004212602.1 CDS Rahaq_1857 NC_015061.1 2010237 2011151 R KEGG: spe:Spro_1185 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit complement(2010237..2011151) Rahnella sp. Y9602 10212863 YP_004212603.1 CDS Rahaq_1858 NC_015061.1 2011167 2011682 R PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_1186 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(2011167..2011682) Rahnella sp. Y9602 10212864 YP_004212604.1 CDS Rahaq_1859 NC_015061.1 2011698 2012630 R KEGG: spe:Spro_2412 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein complement(2011698..2012630) Rahnella sp. Y9602 10212865 YP_004212605.1 CDS Rahaq_1860 NC_015061.1 2012832 2014016 R TIGRFAM: amidohydrolase; KEGG: spe:Spro_1188 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase complement(2012832..2014016) Rahnella sp. Y9602 10212866 YP_004212606.1 CDS Rahaq_1861 NC_015061.1 2014247 2015233 D KEGG: eca:ECA2161 luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: luciferase; luciferase family oxidoreductase 2014247..2015233 Rahnella sp. Y9602 10212867 YP_004212607.1 CDS Rahaq_1862 NC_015061.1 2015243 2016580 D TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; KEGG: eta:ETA_17410 monooxygenase; Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A 2015243..2016580 Rahnella sp. Y9602 10212868 YP_004212608.1 CDS Rahaq_1863 NC_015061.1 2016751 2017419 D PFAM: regulatory protein TetR; KEGG: kpu:KP1_3577 TetR-family trancriptional regulatory protein; TetR family transcriptional regulator 2016751..2017419 Rahnella sp. Y9602 10212869 YP_004212609.1 CDS Rahaq_1864 NC_015061.1 2017525 2018502 D KEGG: kpu:KP1_3576 dehydrogenase; TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; YhdH/YhfP family quinone oxidoreductase 2017525..2018502 Rahnella sp. Y9602 10212870 YP_004212610.1 CDS Rahaq_1865 NC_015061.1 2018695 2019666 D KEGG: yen:YE2673 chemotaxis protein; PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver; response regulator receiver modulated CheW protein 2018695..2019666 Rahnella sp. Y9602 10212871 YP_004212611.1 CDS Rahaq_1866 NC_015061.1 2019535 2019939 R KEGG: bmr:BMI_I1728 hypothetical protein; hypothetical protein complement(2019535..2019939) Rahnella sp. Y9602 10212872 YP_004212612.1 CDS Rahaq_1867 NC_015061.1 2020115 2020897 D PFAM: alpha/beta hydrolase fold; KEGG: azl:AZL_d00500 3-oxoadipate enol-lactonase; alpha/beta hydrolase 2020115..2020897 Rahnella sp. Y9602 10212873 YP_004212613.1 CDS Rahaq_1868 NC_015061.1 2021005 2021568 D PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: msl:Msil_3552 peptidyl-prolyl cis-trans isomerase cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 2021005..2021568 Rahnella sp. Y9602 10212874 YP_004212614.1 CDS Rahaq_1869 NC_015061.1 2021610 2021936 D KEGG: dda:Dd703_1411 hypothetical protein; hypothetical protein 2021610..2021936 Rahnella sp. Y9602 10212875 YP_004212615.1 CDS Rahaq_1870 NC_015061.1 2021947 2022783 D KEGG: dda:Dd703_1412 beta-lactamase domain protein; beta-lactamase 2021947..2022783 Rahnella sp. Y9602 10212876 YP_004212616.1 CDS Rahaq_1871 NC_015061.1 2022976 2024190 D PFAM: acyltransferase 3; KEGG: pwa:Pecwa_4612 acyltransferase 3; acyltransferase 2022976..2024190 Rahnella sp. Y9602 10212877 YP_004212617.1 CDS Rahaq_1872 NC_015061.1 2024353 2025240 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dda:Dd703_1413 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2024353..2025240) Rahnella sp. Y9602 10212878 YP_004212618.1 CDS Rahaq_1873 NC_015061.1 2025708 2027135 D TIGRFAM: 2-methylcitrate dehydratase; KEGG: bvi:Bcep1808_4405 2-methylcitrate dehydratase; PFAM: MmgE/PrpD family protein; 2-methylcitrate dehydratase 2025708..2027135 Rahnella sp. Y9602 10212879 YP_004212619.1 CDS Rahaq_1874 NC_015061.1 2027184 2028326 D KEGG: mgi:Mflv_4889 integral membrane sensor signal transduction histidine kinase; hypothetical protein 2027184..2028326 Rahnella sp. Y9602 10212880 YP_004212620.1 CDS Rahaq_1875 NC_015061.1 2028323 2029303 D KEGG: bfa:Bfae_28180 arylsulfatase A family protein; hypothetical protein 2028323..2029303 Rahnella sp. Y9602 10212881 YP_004212621.1 CDS Rahaq_1876 NC_015061.1 2029332 2030714 D KEGG: bur:Bcep18194_C6917 EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA subfamily drug resistance transporter 2029332..2030714 Rahnella sp. Y9602 10212882 YP_004212622.1 CDS Rahaq_1877 NC_015061.1 2030794 2031711 R PFAM: secretion protein HlyD family protein; KEGG: kpe:KPK_B0020 auxiliary transport protein, membrane fusion protein (MFP) family; secretion protein HlyD family protein complement(2030794..2031711) Rahnella sp. Y9602 10212883 YP_004212623.1 CDS Rahaq_1878 NC_015061.1 2031708 2031923 R PFAM: protein of unknown function DUF1656; KEGG: kpe:KPK_B0021 hypothetical protein; hypothetical protein complement(2031708..2031923) Rahnella sp. Y9602 10212884 YP_004212624.1 CDS Rahaq_1879 NC_015061.1 2031913 2033940 R PFAM: Fusaric acid resistance protein conserved region; KEGG: kpe:KPK_B0022 fusaric acid resistance domain protein; fusaric acid resistance protein complement(2031913..2033940) Rahnella sp. Y9602 10212885 YP_004212625.1 CDS Rahaq_1880 NC_015061.1 2034066 2034851 D KEGG: kpe:KPK_B0023 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 2034066..2034851 Rahnella sp. Y9602 10212886 YP_004212626.1 CDS Rahaq_1881 NC_015061.1 2035075 2036100 D PFAM: luciferase; KEGG: ddd:Dda3937_01241 alkanal monooxygenase subunit alpha; luciferase 2035075..2036100 Rahnella sp. Y9602 10212887 YP_004212627.1 CDS Rahaq_1882 NC_015061.1 2036363 2038573 D KEGG: ctu:Ctu_34980 catalase-peroxidase; TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; catalase/peroxidase HPI 2036363..2038573 Rahnella sp. Y9602 10212888 YP_004212628.1 CDS Rahaq_1883 NC_015061.1 2038634 2040034 R PFAM: FAD linked oxidase domain protein; KEGG: ebi:EbC_27170 FAD-linked oxidase; FAD linked oxidase domain-containing protein complement(2038634..2040034) Rahnella sp. Y9602 10212889 YP_004212629.1 CDS Rahaq_1884 NC_015061.1 2040061 2040876 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_27160 nitrate/sulfonate/bicarbonate ABC transporter permease component; binding-protein-dependent transport system inner membrane protein complement(2040061..2040876) Rahnella sp. Y9602 10212890 YP_004212630.1 CDS Rahaq_1885 NC_015061.1 2040881 2041708 R KEGG: ebi:EbC_27150 nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(2040881..2041708) Rahnella sp. Y9602 10212891 YP_004212631.1 CDS Rahaq_1886 NC_015061.1 2041705 2042688 R KEGG: ebi:EbC_27140 nitrate/sulfonate/bicarbonate ABC transporter permease; nitrate/sulfonate/bicarbonate ABC transporter permease complement(2041705..2042688) Rahnella sp. Y9602 10212892 YP_004212632.1 CDS Rahaq_1887 NC_015061.1 2042702 2043583 R PFAM: Creatininase; KEGG: ebi:EbC_27130 creatininase; creatininase complement(2042702..2043583) Rahnella sp. Y9602 10212893 YP_004212633.1 CDS Rahaq_1888 NC_015061.1 2043613 2044074 R PFAM: Endoribonuclease L-PSP; KEGG: ebi:EbC_27120 endoribonuclease L-PSP; endoribonuclease L-PSP complement(2043613..2044074) Rahnella sp. Y9602 10212894 YP_004212634.1 CDS Rahaq_1889 NC_015061.1 2044064 2045344 R KEGG: ebi:EbC_27110 amidohydrolase 3; amidohydrolase complement(2044064..2045344) Rahnella sp. Y9602 10212895 YP_004212635.1 CDS Rahaq_1890 NC_015061.1 2045365 2046339 R PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: ebi:EbC_27100 vanillate O-demethylase oxidoreductase; ferredoxin complement(2045365..2046339) Rahnella sp. Y9602 10212896 YP_004212636.1 CDS Rahaq_1891 NC_015061.1 2046554 2047477 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebi:EbC_27090 transcriptional regulator, LysR family; LysR family transcriptional regulator 2046554..2047477 Rahnella sp. Y9602 10212897 YP_004212637.1 CDS Rahaq_1892 NC_015061.1 2047740 2048729 D KEGG: ebi:EbC_27080 nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein; nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein 2047740..2048729 Rahnella sp. Y9602 10212898 YP_004212638.1 CDS Rahaq_1893 NC_015061.1 2048741 2050177 D PFAM: amidohydrolase; KEGG: ebi:EbC_27070 amidohydrolase 1; amidohydrolase 2048741..2050177 Rahnella sp. Y9602 10212899 YP_004212639.1 CDS Rahaq_1894 NC_015061.1 2050195 2051199 D PFAM: 2OG-Fe(II) oxygenase; KEGG: ebi:EbC_27060 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase 2050195..2051199 Rahnella sp. Y9602 10212900 YP_004212640.1 CDS Rahaq_1895 NC_015061.1 2051258 2051446 R KEGG: dze:Dd1591_1284 hypothetical protein; hypothetical protein complement(2051258..2051446) Rahnella sp. Y9602 10212901 YP_004212641.1 CDS Rahaq_1896 NC_015061.1 2051671 2052210 D PFAM: Protein of unknown function DUF2058; KEGG: yen:YE2637 hypothetical protein; hypothetical protein 2051671..2052210 Rahnella sp. Y9602 10212902 YP_004212642.1 CDS Rahaq_1897 NC_015061.1 2052330 2053142 R PFAM: PfkB domain protein; KEGG: cbe:Cbei_4798 ribokinase-like domain-containing protein; PfkB domain-containing protein complement(2052330..2053142) Rahnella sp. Y9602 10212903 YP_004212643.1 CDS Rahaq_1898 NC_015061.1 2053154 2054131 R PFAM: sugar isomerase (SIS); KEGG: cbe:Cbei_4799 sugar isomerase (SIS); sugar isomerase (SIS) complement(2053154..2054131) Rahnella sp. Y9602 10212904 YP_004212644.1 CDS Rahaq_1899 NC_015061.1 2054135 2054914 R TIGRFAM: cationic amino acid ABC transporter periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: acd:AOLE_05515 lysine-arginine-ornithine-binding periplasmic protein precursor; SMART: extracellular solute-binding protein family 3; cationic amino acid ABC transporter periplasmic binding protein complement(2054135..2054914) Rahnella sp. Y9602 10212905 YP_004212645.1 CDS Rahaq_1900 NC_015061.1 2055149 2055892 D KEGG: ddr:Deide_3p00171 transcriptional regulator, GntR; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 2055149..2055892 Rahnella sp. Y9602 10212906 YP_004212646.1 CDS Rahaq_1901 NC_015061.1 2055907 2056470 R PFAM: regulatory protein TetR; KEGG: spe:Spro_3184 TetR family transcriptional regulator; TetR family transcriptional regulator complement(2055907..2056470) Rahnella sp. Y9602 10212907 YP_004212647.1 CDS Rahaq_1902 NC_015061.1 2056604 2057695 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: ent:Ent638_2277 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 2056604..2057695 Rahnella sp. Y9602 10212908 YP_004212648.1 CDS Rahaq_1903 NC_015061.1 2057756 2058538 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ent:Ent638_2278 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2057756..2058538 Rahnella sp. Y9602 10212909 YP_004212649.1 CDS Rahaq_1904 NC_015061.1 2058554 2059489 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ent:Ent638_2279 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2058554..2059489 Rahnella sp. Y9602 10212910 YP_004212650.1 CDS Rahaq_1905 NC_015061.1 2059689 2060474 R PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: ent:Ent638_1870 pyrroline-5-carboxylate reductase; coenzyme F420-dependent NADP oxidoreductase complement(2059689..2060474) Rahnella sp. Y9602 10212911 YP_004212651.1 CDS Rahaq_1906 NC_015061.1 2060568 2062019 R KEGG: ent:Ent638_1871 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein complement(2060568..2062019) Rahnella sp. Y9602 10212912 YP_004212652.1 CDS Rahaq_1907 NC_015061.1 2062109 2062723 D PFAM: regulatory protein TetR; KEGG: spe:Spro_3141 TetR family transcriptional regulator; TetR family transcriptional regulator 2062109..2062723 Rahnella sp. Y9602 10212913 YP_004212653.1 CDS Rahaq_1908 NC_015061.1 2062799 2063908 D KEGG: spe:Spro_3140 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 2062799..2063908 Rahnella sp. Y9602 10212914 YP_004212654.1 CDS Rahaq_1909 NC_015061.1 2063905 2066994 D PFAM: acriflavin resistance protein; KEGG: spe:Spro_3139 acriflavin resistance protein; acriflavin resistance protein 2063905..2066994 Rahnella sp. Y9602 10212915 YP_004212655.1 CDS Rahaq_1911 NC_015061.1 2067449 2068189 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebi:EbC_28560 short chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 2067449..2068189 Rahnella sp. Y9602 10212917 YP_004212656.1 CDS Rahaq_1912 NC_015061.1 2068738 2069514 R PFAM: protein of unknown function DUF980; KEGG: spe:Spro_3110 hypothetical protein; hypothetical protein complement(2068738..2069514) Rahnella sp. Y9602 10212919 YP_004212657.1 CDS Rahaq_1913 NC_015061.1 2069762 2071285 R manually curated; PFAM: EAL domain protein; KEGG: etr:ETAE_2294 hypothetical protein; SMART: EAL domain protein; diguanylate phosphodiesterase complement(2069762..2071285) Rahnella sp. Y9602 10212920 YP_004212658.1 CDS Rahaq_1914 NC_015061.1 2071815 2072828 D PFAM: alpha/beta hydrolase fold; KEGG: spe:Spro_2332 alpha/beta hydrolase fold; alpha/beta hydrolase 2071815..2072828 Rahnella sp. Y9602 10212921 YP_004212659.1 CDS Rahaq_1915 NC_015061.1 2072908 2073414 R PFAM: Phenolic acid decarboxylase; KEGG: cro:ROD_43231 phenolic acid decarboxylase; Phenolic acid decarboxylase complement(2072908..2073414) Rahnella sp. Y9602 10212922 YP_004212660.1 CDS Rahaq_1916 NC_015061.1 2073560 2074456 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dze:Dd1591_2089 transcriptional regulator, LysR family; LysR family transcriptional regulator 2073560..2074456 Rahnella sp. Y9602 10212923 YP_004212661.1 CDS Rahaq_1917 NC_015061.1 2074492 2076126 R PFAM: protein of unknown function DUF1705; sulfatase; KEGG: etr:ETAE_1218 sulfatase; hypothetical protein complement(2074492..2076126) Rahnella sp. Y9602 10212924 YP_004212662.1 CDS Rahaq_1918 NC_015061.1 2076486 2077277 D KEGG: spe:Spro_2352 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase; PFAM: transferase hexapeptide repeat containing protein; acyl-ACP-UDP-N- acetylglucosamine O-acyltransferase 2076486..2077277 Rahnella sp. Y9602 10212925 YP_004212663.1 CDS Rahaq_1919 NC_015061.1 2077321 2078343 R KEGG: bam:Bamb_3454 hypothetical protein; hypothetical protein complement(2077321..2078343) Rahnella sp. Y9602 10212926 YP_004212664.1 CDS Rahaq_1920 NC_015061.1 2078356 2079306 R PFAM: protein of unknown function DUF979; KEGG: bxe:Bxe_B0932 integral membrane protein; hypothetical protein complement(2078356..2079306) Rahnella sp. Y9602 10212927 YP_004212665.1 CDS Rahaq_1921 NC_015061.1 2079303 2079992 R PFAM: protein of unknown function DUF969; KEGG: bxe:Bxe_B0933 hypothetical protein; hypothetical protein complement(2079303..2079992) Rahnella sp. Y9602 10212928 YP_004212666.1 CDS Rahaq_1922 NC_015061.1 2080327 2080986 R PFAM: protein of unknown function DUF208; KEGG: spe:Spro_2683 hypothetical protein; hypothetical protein complement(2080327..2080986) Rahnella sp. Y9602 10212929 YP_004212667.1 CDS Rahaq_1923 NC_015061.1 2081170 2082180 D KEGG: pct:PC1_0690 hypothetical protein; hypothetical protein 2081170..2082180 Rahnella sp. Y9602 10212930 YP_004212668.1 CDS Rahaq_1924 NC_015061.1 2082387 2083445 D PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: pap:PSPA7_2965 alcohol dehydrogenase; molecular chaperone GroES 2082387..2083445 Rahnella sp. Y9602 10212931 YP_004212669.1 CDS Rahaq_1925 NC_015061.1 2083646 2083984 D KEGG: spe:Spro_1812 hypothetical protein; hypothetical protein 2083646..2083984 Rahnella sp. Y9602 10212932 YP_004212670.1 CDS Rahaq_1926 NC_015061.1 2084084 2085007 D PFAM: Ion transport protein; KEGG: spe:Spro_3053 ion transport protein; Ion transport protein 2084084..2085007 Rahnella sp. Y9602 10212933 YP_004212671.1 CDS Rahaq_1927 NC_015061.1 2085306 2085515 D KEGG: yen:YE2590 cold shock-like protein CspC2; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock protein 2085306..2085515 Rahnella sp. Y9602 10212934 YP_004212672.1 CDS Rahaq_1928 NC_015061.1 2085523 2085741 R hypothetical protein complement(2085523..2085741) Rahnella sp. Y9602 10212935 YP_004212673.1 CDS Rahaq_1929 NC_015061.1 2085941 2086138 D PFAM: Dextransucrase DSRB; KEGG: yen:YE2589 hypothetical protein; Dextransucrase DSRB 2085941..2086138 Rahnella sp. Y9602 10212936 YP_004212674.1 CDS Rahaq_1930 NC_015061.1 2086242 2087942 R KEGG: yen:YE2588 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer complement(2086242..2087942) Rahnella sp. Y9602 10212937 YP_004212675.1 CDS Rahaq_1931 NC_015061.1 2088192 2088884 R KEGG: pam:PANA_2308 RcsA; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; LuxR family transcriptional regulator complement(2088192..2088884) Rahnella sp. Y9602 10212938 YP_004212676.1 CDS Rahaq_1932 NC_015061.1 2089196 2090386 R PFAM: glycosyl hydrolase family 88; KEGG: cko:CKO_04418 hypothetical protein; glycosyl hydrolase family protein complement(2089196..2090386) Rahnella sp. Y9602 10212939 YP_004212677.1 CDS Rahaq_1933 NC_015061.1 2090383 2091672 R TIGRFAM: oligosaccharide/H+ symporter, major facilitator superfamily (MFS); KEGG: ctu:Ctu_14690 hypothetical protein; oligosaccharide/H+ symporter, major facilitator superfamily (MFS) complement(2090383..2091672) Rahnella sp. Y9602 10212940 YP_004212678.1 CDS Rahaq_1934 NC_015061.1 2091700 2093538 R PFAM: Uncharacterised conserved protein UCP014753; KEGG: cro:ROD_35751 hypothetical protein; hypothetical protein complement(2091700..2093538) Rahnella sp. Y9602 10212941 YP_004212679.1 CDS Rahaq_1935 NC_015061.1 2093799 2094650 D KEGG: ctu:Ctu_14710 hypothetical protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 2093799..2094650 Rahnella sp. Y9602 10212942 YP_004212680.1 CDS Rahaq_1936 NC_015061.1 2094647 2096029 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: spe:Spro_3047 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F complement(2094647..2096029) Rahnella sp. Y9602 10212943 YP_004212681.1 CDS Rahaq_1937 NC_015061.1 2096448 2098106 D PFAM: periplasmic glucan biosynthesis protein MdoG; KEGG: set:SEN1430 glucan biosynthesis protein D; periplasmic glucan biosynthesis protein MdoG 2096448..2098106 Rahnella sp. Y9602 10212944 YP_004212682.1 CDS Rahaq_1938 NC_015061.1 2098390 2098572 R KEGG: spe:Spro_3041 hypothetical protein; hypothetical protein complement(2098390..2098572) Rahnella sp. Y9602 10212945 YP_004212683.1 CDS Rahaq_1939 NC_015061.1 2098963 2100060 D PFAM: iron-containing alcohol dehydrogenase; KEGG: ebi:EbC_25200 glycerol dehydrogenase; iron-containing alcohol dehydrogenase 2098963..2100060 Rahnella sp. Y9602 10212946 YP_004212684.1 CDS Rahaq_1940 NC_015061.1 2100278 2101573 R PFAM: protein of unknown function DUF445; KEGG: pam:PANA_0512 YjiN; hypothetical protein complement(2100278..2101573) Rahnella sp. Y9602 10212947 YP_004212685.1 CDS Rahaq_1941 NC_015061.1 2101573 2102250 R PFAM: LysR substrate-binding; KEGG: bmj:BMULJ_04382 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2101573..2102250) Rahnella sp. Y9602 10212948 YP_004212686.1 CDS Rahaq_1943 NC_015061.1 2102531 2102662 D hypothetical protein 2102531..2102662 Rahnella sp. Y9602 10212950 YP_004212687.1 CDS Rahaq_1944 NC_015061.1 2102614 2104275 D TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; KEGG: pwa:Pecwa_3315 multidrug transporter membrane component/ATP-binding component; SMART: AAA ATPase; cyclic peptide transporter 2102614..2104275 Rahnella sp. Y9602 10212951 YP_004212688.1 CDS Rahaq_1945 NC_015061.1 2104300 2105115 D KEGG: esa:ESA_03469 hypothetical protein; hypothetical protein 2104300..2105115 Rahnella sp. Y9602 10212952 YP_004212689.1 CDS Rahaq_1946 NC_015061.1 2105348 2107774 D PFAM: MscS Mechanosensitive ion channel; KEGG: pct:PC1_2869 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 2105348..2107774 Rahnella sp. Y9602 10212953 YP_004212690.1 CDS Rahaq_1947 NC_015061.1 2107987 2111118 R KEGG: yen:YE3630 cation efflux system protein; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; CzcA family heavy metal efflux pump complement(2107987..2111118) Rahnella sp. Y9602 10212954 YP_004212691.1 CDS Rahaq_1948 NC_015061.1 2111115 2112359 R KEGG: yen:YE3629 efflux system protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: biotin/lipoyl attachment domain-containing protein; RND family efflux transporter MFP subunit complement(2111115..2112359) Rahnella sp. Y9602 10212955 YP_004212692.1 CDS Rahaq_1949 NC_015061.1 2112359 2113612 R PFAM: outer membrane efflux protein; KEGG: yen:YE3628 outer membrane efflux protein; outer membrane efflux protein complement(2112359..2113612) Rahnella sp. Y9602 10212956 YP_004212693.1 CDS Rahaq_1950 NC_015061.1 2113627 2113962 R KEGG: yen:YE3627 hypothetical protein; hypothetical protein complement(2113627..2113962) Rahnella sp. Y9602 10212957 YP_004212694.1 CDS Rahaq_1951 NC_015061.1 2114065 2114484 R KEGG: spe:Spro_3366 hypothetical protein; hypothetical protein complement(2114065..2114484) Rahnella sp. Y9602 10212958 YP_004212695.1 CDS Rahaq_1952 NC_015061.1 2114662 2115669 R KEGG: spe:Spro_1621 Mg2 transporter protein CorA family protein; TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; magnesium and cobalt transport protein CorA complement(2114662..2115669) Rahnella sp. Y9602 10212959 YP_004212696.1 CDS Rahaq_1953 NC_015061.1 2115788 2116621 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pau:PA14_46420 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(2115788..2116621) Rahnella sp. Y9602 10212960 YP_004212697.1 CDS Rahaq_1954 NC_015061.1 2116785 2117726 D KEGG: bpy:Bphyt_2008 transcriptional regulator, AraC family; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 2116785..2117726 Rahnella sp. Y9602 10212961 YP_004212698.1 CDS Rahaq_1955 NC_015061.1 2117734 2119416 R KEGG: ebi:EbC_14400 RND efflux system, outer membrane lipoprotein, NodT; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein complement(2117734..2119416) Rahnella sp. Y9602 10212962 YP_004212699.1 CDS Rahaq_1956 NC_015061.1 2119400 2120968 R KEGG: enc:ECL_02910 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA subfamily drug resistance transporter complement(2119400..2120968) Rahnella sp. Y9602 10212963 YP_004212700.1 CDS Rahaq_1957 NC_015061.1 2120965 2122155 R PFAM: secretion protein HlyD family protein; KEGG: enc:ECL_02911 multidrug resistance protein K; secretion protein HlyD family protein complement(2120965..2122155) Rahnella sp. Y9602 10212964 YP_004212701.1 CDS Rahaq_1958 NC_015061.1 2122435 2123346 D KEGG: sgl:SG1151 transport protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter 2122435..2123346 Rahnella sp. Y9602 10212965 YP_004212702.1 CDS Rahaq_1959 NC_015061.1 2123517 2124947 R PFAM: Alkaline phosphatase; KEGG: spe:Spro_1528 alkaline phosphatase; SMART: Alkaline phosphatase; alkaline phosphatase complement(2123517..2124947) Rahnella sp. Y9602 10212966 YP_004212703.1 CDS Rahaq_1960 NC_015061.1 2125720 2126742 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding lysin domain; KEGG: etr:ETAE_3093 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein complement(2125720..2126742) Rahnella sp. Y9602 10212967 YP_004212704.1 CDS Rahaq_1961 NC_015061.1 2126902 2128455 R KEGG: pfl:PFL_0259 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA subfamily drug resistance transporter complement(2126902..2128455) Rahnella sp. Y9602 10212968 YP_004212705.1 CDS Rahaq_1962 NC_015061.1 2128537 2129661 D PFAM: secretion protein HlyD family protein; KEGG: pfl:PFL_0258 HlyD family secretion protein; secretion protein HlyD family protein 2128537..2129661 Rahnella sp. Y9602 10212969 YP_004212706.1 CDS Rahaq_1963 NC_015061.1 2129699 2130289 D PFAM: regulatory protein TetR; KEGG: cak:Caul_5150 TetR family transcriptional regulator; TetR family transcriptional regulator 2129699..2130289 Rahnella sp. Y9602 10212970 YP_004212707.1 CDS Rahaq_1964 NC_015061.1 2130349 2132460 R KEGG: spe:Spro_2736 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; TonB-dependent siderophore receptor complement(2130349..2132460) Rahnella sp. Y9602 10212971 YP_004212708.1 CDS Rahaq_1965 NC_015061.1 2132812 2133495 D PFAM: O-methyltransferase family 3; KEGG: kpe:KPK_2982 O-methyltransferase family protein; O-methyltransferase family protein 2132812..2133495 Rahnella sp. Y9602 10212972 YP_004212709.1 CDS Rahaq_1966 NC_015061.1 2133502 2135463 R PFAM: glycoside hydrolase family 3 domain protein; KEGG: ddc:Dd586_2493 glycoside hydrolase family 3 domain protein; glycoside hydrolase complement(2133502..2135463) Rahnella sp. Y9602 10212973 YP_004212710.1 CDS Rahaq_1967 NC_015061.1 2135558 2136076 R PFAM: Chromate transporter; KEGG: spe:Spro_2328 chromate transporter; chromate transporter complement(2135558..2136076) Rahnella sp. Y9602 10212974 YP_004212711.1 CDS Rahaq_1968 NC_015061.1 2136076 2136660 R PFAM: Chromate transporter; KEGG: spe:Spro_2327 chromate transporter; chromate transporter complement(2136076..2136660) Rahnella sp. Y9602 10212975 YP_004212712.1 CDS Rahaq_1969 NC_015061.1 2136788 2137699 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2326 LysR family transcriptional regulator; LysR family transcriptional regulator 2136788..2137699 Rahnella sp. Y9602 10212976 YP_004212713.1 CDS Rahaq_1970 NC_015061.1 2137696 2138049 R SMART: regulatory protein ArsR; KEGG: yen:YE0809 ArsR family transcriptional regulator; regulatory protein ArsR complement(2137696..2138049) Rahnella sp. Y9602 10212977 YP_004212714.1 CDS Rahaq_1971 NC_015061.1 2138287 2140392 D KEGG: yen:YE0808 elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein; translation elongation factor G 2138287..2140392 Rahnella sp. Y9602 10212978 YP_004212715.1 CDS Rahaq_1972 NC_015061.1 2140355 2140516 D KEGG: msy:MS53_0229 phase-variable hemagglutinin; phase-variable hemagglutinin 2140355..2140516 Rahnella sp. Y9602 10212979 YP_004212716.1 CDS Rahaq_1973 NC_015061.1 2140491 2140679 D KEGG: vfm:VFMJ11_A0650 CcdB antidote CcdA; CcdB antidote CcdA 2140491..2140679 Rahnella sp. Y9602 10212980 YP_004212717.1 CDS Rahaq_1974 NC_015061.1 2140735 2141424 R KEGG: spe:Spro_1813 TrpR binding protein WrbA; TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; flavoprotein WrbA complement(2140735..2141424) Rahnella sp. Y9602 10212981 YP_004212718.1 CDS Rahaq_1976 NC_015061.1 2141855 2142058 R PFAM: protein of unknown function DUF1233 excisionase; KEGG: sed:SeD_A1075 excisionase; hypothetical protein complement(2141855..2142058) Rahnella sp. Y9602 10212983 YP_004212719.1 CDS Rahaq_1977 NC_015061.1 2142393 2142842 D KEGG: kva:Kvar_0973 hypothetical protein; hypothetical protein 2142393..2142842 Rahnella sp. Y9602 10212984 YP_004212720.1 CDS Rahaq_1978 NC_015061.1 2142842 2143156 D PFAM: protein of unknown function DUF1493; KEGG: pwa:Pecwa_0940 protein of unknown function DUF1493; hypothetical protein 2142842..2143156 Rahnella sp. Y9602 10212985 YP_004212721.1 CDS Rahaq_1979 NC_015061.1 2143182 2143664 R KEGG: ses:SARI_00061 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; type VI secretion system effector complement(2143182..2143664) Rahnella sp. Y9602 10212986 YP_004212722.1 CDS Rahaq_1980 NC_015061.1 2143966 2144118 R KEGG: psa:PST_2721 TrpR binding protein WrbA; hypothetical protein complement(2143966..2144118) Rahnella sp. Y9602 10212987 YP_004212723.1 CDS Rahaq_1981 NC_015061.1 2144335 2144559 R KEGG: cfa:477766 protein phosphatase 1, regulatory (inhibitor) subunit 3C; hypothetical protein complement(2144335..2144559) Rahnella sp. Y9602 10212988 YP_004212724.1 CDS Rahaq_1982 NC_015061.1 2144556 2144972 R KEGG: ecg:E2348C_0424 hypothetical protein; hypothetical protein complement(2144556..2144972) Rahnella sp. Y9602 10212989 YP_004212725.1 CDS Rahaq_1983 NC_015061.1 2145022 2146410 R PFAM: YadA domain-containing protein; KEGG: yen:YE1873 hypothetical protein; YadA domain-containing protein complement(2145022..2146410) Rahnella sp. Y9602 10212990 YP_004212726.1 CDS Rahaq_1984 NC_015061.1 2146741 2147067 D KEGG: sdy:SDY_0412 hypothetical protein; hypothetical protein 2146741..2147067 Rahnella sp. Y9602 10212991 YP_004212727.1 CDS Rahaq_1985 NC_015061.1 2147169 2147474 R PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: ebi:EbC_26060 ethyl tert-butyl ether degradation protein; ethyl tert-butyl ether degradation EthD complement(2147169..2147474) Rahnella sp. Y9602 10212992 YP_004212728.1 CDS Rahaq_1986 NC_015061.1 2147628 2149007 D PFAM: sodium/hydrogen exchanger; KEGG: ebi:EbC_26080 sodium/hydrogen exchanger; sodium/hydrogen exchanger 2147628..2149007 Rahnella sp. Y9602 10212993 YP_004212729.1 CDS Rahaq_1987 NC_015061.1 2149052 2149837 R PFAM: ABC transporter; KEGG: yen:YE2390 high-affinity zinc transporter membrane component; ABC transporter complement(2149052..2149837) Rahnella sp. Y9602 10212994 YP_004212730.1 CDS Rahaq_1988 NC_015061.1 2149834 2150592 R manually curated; PFAM: ABC transporter related; KEGG: spe:Spro_2774 high-affinity zinc transporter ATPase; SMART: AAA ATPase; ABC transporter complement(2149834..2150592) Rahnella sp. Y9602 10212995 YP_004212731.1 CDS Rahaq_1989 NC_015061.1 2150604 2151620 D KEGG: spe:Spro_2773 high-affinity zinc transporter periplasmic component; manually curated; PFAM: periplasmic solute binding protein; periplasmic solute binding protein 2150604..2151620 Rahnella sp. Y9602 10212996 YP_004212732.1 CDS Rahaq_1990 NC_015061.1 2151641 2152975 D KEGG: spe:Spro_2772 hypothetical protein; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; Opacity-associated protein A domain protein; SMART: Peptidoglycan-binding LysM; peptidase M23 2151641..2152975 Rahnella sp. Y9602 10212997 YP_004212733.1 CDS Rahaq_1991 NC_015061.1 2153081 2154061 D KEGG: spe:Spro_2771 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; TIGRFAM: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; PFAM: lipid A biosynthesis acyltransferase; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2153081..2154061 Rahnella sp. Y9602 10212998 YP_004212734.1 CDS Rahaq_1992 NC_015061.1 2154108 2155328 R PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_0092 major facilitator transporter; major facilitator superfamily protein complement(2154108..2155328) Rahnella sp. Y9602 10212999 YP_004212735.1 CDS Rahaq_1993 NC_015061.1 2155427 2157811 R PFAM: IucA/IucC family protein; KEGG: ebi:EbC_25010 siderophore biosynthesis protein; IucA/IucC family protein complement(2155427..2157811) Rahnella sp. Y9602 10213000 YP_004212736.1 CDS Rahaq_1994 NC_015061.1 2157826 2159136 R KEGG: ebi:EbC_25000 L-lysine 6-monooxygenase (NADPH); L-lysine 6-monooxygenase complement(2157826..2159136) Rahnella sp. Y9602 10213001 YP_004212737.1 CDS Rahaq_1995 NC_015061.1 2159150 2160718 R PFAM: Pyridoxal-dependent decarboxylase; KEGG: pam:PANA_0635 Ddc; pyridoxal-dependent decarboxylase complement(2159150..2160718) Rahnella sp. Y9602 10213002 YP_004212738.1 CDS Rahaq_1996 NC_015061.1 2161352 2162794 R TIGRFAM: pyruvate kinase; KEGG: spe:Spro_2770 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase complement(2161352..2162794) Rahnella sp. Y9602 10213003 YP_004212739.1 CDS Rahaq_1997 NC_015061.1 2163029 2163898 R PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: spe:Spro_2769 DNA-binding transcriptional regulator HexR; RpiR family transcriptional regulator complement(2163029..2163898) Rahnella sp. Y9602 10213004 YP_004212740.1 CDS Rahaq_1998 NC_015061.1 2164306 2165781 D TIGRFAM: glucose-6-phosphate 1-dehydrogenase; KEGG: yen:YE2383 glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase 2164306..2165781 Rahnella sp. Y9602 10213005 YP_004212741.1 CDS Rahaq_1999 NC_015061.1 2166047 2166688 D KEGG: spe:Spro_4500 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase 2166047..2166688 Rahnella sp. Y9602 10213006 YP_004212742.1 CDS Rahaq_2000 NC_015061.1 2166754 2167098 R PFAM: Endoribonuclease L-PSP; KEGG: pam:PANA_2138 YoaB; endoribonuclease L-PSP complement(2166754..2167098) Rahnella sp. Y9602 10213007 YP_004212743.1 CDS Rahaq_2001 NC_015061.1 2167241 2169154 D SMART: helicase c2; DEAD-like helicase; KEGG: spe:Spro_2763 helicase C2; helicase c2 2167241..2169154 Rahnella sp. Y9602 10213008 YP_004212744.1 CDS Rahaq_2002 NC_015061.1 2169284 2169985 D PFAM: peptidase M22 glycoprotease; KEGG: ypb:YPTS_2116 peptidase M22 glycoprotease; peptidase M22 glycoprotease 2169284..2169985 Rahnella sp. Y9602 10213009 YP_004212745.1 CDS Rahaq_2003 NC_015061.1 2170048 2170680 D KEGG: esa:ESA_01454 hypothetical protein; TIGRFAM: outer membrane lipoprotein, Slp family; PFAM: outer membrane lipoprotein Slp; outer membrane lipoprotein, Slp family 2170048..2170680 Rahnella sp. Y9602 10213010 YP_004212746.1 CDS Rahaq_2004 NC_015061.1 2170998 2172695 D PFAM: AMP-dependent synthetase and ligase; KEGG: spe:Spro_2760 long-chain-fatty-acid--CoA ligase; AMP-dependent synthetase/ligase 2170998..2172695 Rahnella sp. Y9602 10213011 YP_004212747.1 CDS Rahaq_2005 NC_015061.1 2172793 2173914 D SMART: 3'-5' exonuclease; HRDC domain protein; TIGRFAM: ribonuclease D; KEGG: ypb:YPTS_2119 ribonuclease D; PFAM: 3'-5' exonuclease; HRDC domain protein; ribonuclease D 2172793..2173914 Rahnella sp. Y9602 10213012 YP_004212748.1 CDS Rahaq_2006 NC_015061.1 2174262 2174531 R KEGG: yen:YE2373 cell division topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; cell division topological specificity factor MinE complement(2174262..2174531) Rahnella sp. Y9602 10213013 YP_004212749.1 CDS Rahaq_2007 NC_015061.1 2174535 2175347 R TIGRFAM: septum site-determining protein MinD; KEGG: dze:Dd1591_1996 cell division inhibitor MinD; septum site-determining protein MinD complement(2174535..2175347) Rahnella sp. Y9602 10213014 YP_004212750.1 CDS Rahaq_2008 NC_015061.1 2175372 2176061 R KEGG: spe:Spro_2756 septum formation inhibitor; TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; septum site-determining protein MinC complement(2175372..2176061) Rahnella sp. Y9602 10213015 YP_004212751.1 CDS Rahaq_2009 NC_015061.1 2176198 2176470 D PFAM: protein of unknown function DUF709; KEGG: spe:Spro_2755 hypothetical protein; hypothetical protein 2176198..2176470 Rahnella sp. Y9602 10213016 YP_004212752.1 CDS Rahaq_2010 NC_015061.1 2176593 2177768 D TIGRFAM: lytic murein transglycosylase; KEGG: ypb:YPTS_2124 lytic murein transglycosylase; lytic murein transglycosylase 2176593..2177768 Rahnella sp. Y9602 10213017 YP_004212753.1 CDS Rahaq_2011 NC_015061.1 2177795 2178451 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: ddd:Dda3937_02922 isomerase/hydrolase; fumarylacetoacetate (FAA) hydrolase 2177795..2178451 Rahnella sp. Y9602 10213018 YP_004212754.1 CDS Rahaq_2012 NC_015061.1 2178559 2179008 D PFAM: protein of unknown function UPF0153; KEGG: spe:Spro_2751 hypothetical protein; hypothetical protein 2178559..2179008 Rahnella sp. Y9602 10213019 YP_004212755.1 CDS Rahaq_2013 NC_015061.1 2179083 2179424 R PFAM: Sigma-S stabilisation anti-adaptor protein; KEGG: ebi:EbC_11500 conserved uncharacterized protein; Sigma-S stabilization anti-adaptor protein complement(2179083..2179424) Rahnella sp. Y9602 10213020 YP_004212756.1 CDS Rahaq_2014 NC_015061.1 2179539 2180648 R PFAM: protein of unknown function UPF0118; KEGG: spe:Spro_2050 hypothetical protein; hypothetical protein complement(2179539..2180648) Rahnella sp. Y9602 10213021 YP_004212757.1 CDS Rahaq_2015 NC_015061.1 2180878 2181075 R KEGG: sco:SCO4415 integral membrane protein; hypothetical protein complement(2180878..2181075) Rahnella sp. Y9602 10213022 YP_004212758.1 CDS Rahaq_2016 NC_015061.1 2181377 2182381 R PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ddd:Dda3937_00500 ISEch4 transposase; transposase IS116/IS110/IS902 family protein complement(2181377..2182381) Rahnella sp. Y9602 10213023 YP_004212759.1 CDS Rahaq_2017 NC_015061.1 2182494 2183024 R PFAM: Disulphide bond formation protein DsbB; KEGG: ebi:EbC_24350 disulfide bond formation protein; disulfide bond formation protein DsbB complement(2182494..2183024) Rahnella sp. Y9602 10213024 YP_004212760.1 CDS Rahaq_2018 NC_015061.1 2183206 2184783 R KEGG: spe:Spro_2749 sodium/proton antiporter; TIGRFAM: Na+/H+ antiporter NhaB; PFAM: Na+H+ antiporter NhaB; Na+/H+ antiporter NhaB complement(2183206..2184783) Rahnella sp. Y9602 10213025 YP_004212761.1 CDS Rahaq_2019 NC_015061.1 2185028 2185750 D TIGRFAM: fatty acid metabolism transcriptional regulator FadR; PFAM: fatty acid responsive transcription factor FadR domain protein; regulatory protein GntR HTH; KEGG: yen:YE2283 fatty acid metabolism regulator; SMART: regulatory protein GntR HTH; fatty acid metabolism transcriptional regulator FadR 2185028..2185750 Rahnella sp. Y9602 10213026 YP_004212762.1 CDS Rahaq_2020 NC_015061.1 2185872 2187407 R PFAM: SpoVR family protein; KEGG: spe:Spro_2747 SpoVR family protein; SpoVR family protein complement(2185872..2187407) Rahnella sp. Y9602 10213027 YP_004212763.1 CDS Rahaq_2021 NC_015061.1 2187662 2188492 R PFAM: alpha/beta hydrolase fold; KEGG: ebi:EbC_16970 conserved uncharacterized protein; alpha/beta hydrolase complement(2187662..2188492) Rahnella sp. Y9602 10213028 YP_004212764.1 CDS Rahaq_2022 NC_015061.1 2188733 2188951 D TIGRFAM: selenium-binding protein YdfZ; KEGG: ent:Ent638_1936 cytoplasmic protein; selenium-binding protein YdfZ 2188733..2188951 Rahnella sp. Y9602 10213029 YP_004212765.1 CDS Rahaq_2023 NC_015061.1 2188995 2189183 D hypothetical protein 2188995..2189183 Rahnella sp. Y9602 10213030 YP_004212766.1 CDS Rahaq_2024 NC_015061.1 2189433 2190734 D PFAM: FAD dependent oxidoreductase; KEGG: spe:Spro_2746 D-amino acid dehydrogenase small subunit; FAD dependent oxidoreductase 2189433..2190734 Rahnella sp. Y9602 10213031 YP_004212767.1 CDS Rahaq_2025 NC_015061.1 2190807 2191880 D TIGRFAM: alanine racemase; KEGG: spe:Spro_2745 alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 2190807..2191880 Rahnella sp. Y9602 10213032 YP_004212768.1 CDS Rahaq_2026 NC_015061.1 2191889 2193094 R KEGG: spe:Spro_2744 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; Bcr/CflA subfamily drug resistance transporter complement(2191889..2193094) Rahnella sp. Y9602 10213033 YP_004212769.1 CDS Rahaq_2027 NC_015061.1 2193128 2193220 D hypothetical protein 2193128..2193220 Rahnella sp. Y9602 10213034 YP_004212770.1 CDS Rahaq_2028 NC_015061.1 2193236 2194066 R TIGRFAM: NAD+ synthetase; KEGG: enc:ECL_02441 NAD synthetase; NAD+ synthetase complement(2193236..2194066) Rahnella sp. Y9602 10213035 YP_004212771.1 CDS Rahaq_2029 NC_015061.1 2194534 2195298 D PFAM: protein of unknown function DUF481; KEGG: spe:Spro_0878 hypothetical protein; hypothetical protein 2194534..2195298 Rahnella sp. Y9602 10213036 YP_004212772.1 CDS Rahaq_2030 NC_015061.1 2195808 2197430 D PFAM: Polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: spe:Spro_4403 polypeptide-transport-associated domain-containing protein; Polypeptide-transport-associated domain protein ShlB-type 2195808..2197430 Rahnella sp. Y9602 10213037 YP_004212773.1 CDS Rahaq_2031 NC_015061.1 2197467 2208737 D KEGG: ctu:Ctu_1p01160 hypothetical protein; TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein; filamentous hemagglutinin family outer membrane protein 2197467..2208737 Rahnella sp. Y9602 10213038 YP_004212774.1 CDS Rahaq_2032 NC_015061.1 2208737 2209171 D KEGG: ara:Arad_3589 hypothetical protein; hypothetical protein 2208737..2209171 Rahnella sp. Y9602 10213039 YP_004212775.1 CDS Rahaq_2033 NC_015061.1 2209162 2209710 R PFAM: phosphotransferase KptA/Tpt1; KEGG: ddc:Dd586_3954 phosphotransferase KptA/Tpt1; phosphotransferase KptA/Tpt1 complement(2209162..2209710) Rahnella sp. Y9602 10213040 YP_004212776.1 CDS Rahaq_2034 NC_015061.1 2209958 2212579 D PFAM: Haemagluttinin repeat-containing protein; KEGG: spe:Spro_4402 filamentous haemagglutinin outer membrane protein; hemagluttinin repeat-containing protein 2209958..2212579 Rahnella sp. Y9602 10213041 YP_004212777.1 CDS Rahaq_2035 NC_015061.1 2212542 2213390 D PFAM: protein of unknown function DUF638 hemagglutinin/hemolysin; KEGG: plu:plu1149 hypothetical protein; hypothetical protein 2212542..2213390 Rahnella sp. Y9602 10213042 YP_004212778.1 CDS Rahaq_2036 NC_015061.1 2213835 2214242 D KEGG: jan:Jann_3881 hypothetical protein; hypothetical protein 2213835..2214242 Rahnella sp. Y9602 10213043 YP_004212779.1 CDS Rahaq_2038 NC_015061.1 2215965 2216213 D KEGG: ent:Ent638_0055 hypothetical protein; hypothetical protein 2215965..2216213 Rahnella sp. Y9602 10213045 YP_004212780.1 CDS Rahaq_2040 NC_015061.1 2217252 2217551 D KEGG: psp:PSPPH_5064 hypothetical protein; hypothetical protein 2217252..2217551 Rahnella sp. Y9602 10213047 YP_004212781.1 CDS Rahaq_2042 NC_015061.1 2218003 2218128 D KEGG: rme:Rmet_4797 rhs-related transmembrane protein, YD repeat protein; rhs-related transmembrane protein, YD repeat protein 2218003..2218128 Rahnella sp. Y9602 10213049 YP_004212782.1 CDS Rahaq_2043 NC_015061.1 2218125 2218355 D hypothetical protein 2218125..2218355 Rahnella sp. Y9602 10213050 YP_004212783.1 CDS Rahaq_2044 NC_015061.1 2219009 2220283 R PFAM: protein of unknown function DUF444; KEGG: ypb:YPTS_2141 hypothetical protein; hypothetical protein complement(2219009..2220283) Rahnella sp. Y9602 10213051 YP_004212784.1 CDS Rahaq_2045 NC_015061.1 2220318 2222252 R KEGG: ctu:Ctu_18000 uncharacterized protein YeaG; PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein; serine protein kinase PrkA complement(2220318..2222252) Rahnella sp. Y9602 10213052 YP_004212785.1 CDS Rahaq_2046 NC_015061.1 2222858 2223607 D PFAM: MltA-interacting MipA family protein; KEGG: yen:YE2271 hypothetical protein; MltA-interacting MipA family protein 2222858..2223607 Rahnella sp. Y9602 10213053 YP_004212786.1 CDS Rahaq_2047 NC_015061.1 2223738 2224592 D PFAM: aldo/keto reductase; KEGG: ddc:Dd586_2164 aldo/keto reductase; aldo/keto reductase 2223738..2224592 Rahnella sp. Y9602 10213054 YP_004212787.1 CDS Rahaq_2048 NC_015061.1 2224675 2225544 R PFAM: Aldose 1-epimerase; KEGG: spe:Spro_2729 aldose 1-epimerase; aldose 1-epimerase complement(2224675..2225544) Rahnella sp. Y9602 10213055 YP_004212788.1 CDS Rahaq_2049 NC_015061.1 2225711 2226709 R TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: yen:YE2265 glyceraldehyde 3-phosphate dehydrogenase A; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; glyceraldehyde-3-phosphate dehydrogenase, type I complement(2225711..2226709) Rahnella sp. Y9602 10213056 YP_004212789.1 CDS Rahaq_2050 NC_015061.1 2227059 2227472 D TIGRFAM: methionine-R-sulfoxide reductase; KEGG: spe:Spro_2727 methionine sulfoxide reductase B; PFAM: methionine sulfoxide reductase B; methionine-R-sulfoxide reductase 2227059..2227472 Rahnella sp. Y9602 10213057 YP_004212790.1 CDS Rahaq_2051 NC_015061.1 2227568 2227840 D PFAM: protein of unknown function DUF1315; KEGG: ypb:YPTS_2148 hypothetical protein; hypothetical protein 2227568..2227840 Rahnella sp. Y9602 10213058 YP_004212791.1 CDS Rahaq_2052 NC_015061.1 2227917 2228546 R KEGG: ddd:Dda3937_04576 nicotinamidase/pyrazinamidase; PFAM: isochorismatase hydrolase; nicotinamidase complement(2227917..2228546) Rahnella sp. Y9602 10213059 YP_004212792.1 CDS Rahaq_2053 NC_015061.1 2228560 2229573 R KEGG: enc:ECL_02465 cytoplasmic asparaginase I; TIGRFAM: L-asparaginase, type I; PFAM: Asparaginase/glutaminase; type I L-asparaginase complement(2228560..2229573) Rahnella sp. Y9602 10213060 YP_004212793.1 CDS Rahaq_2054 NC_015061.1 2229731 2231584 R KEGG: ypb:YPTS_2151 protease 4; TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; signal peptide peptidase SppA, 67K type complement(2229731..2231584) Rahnella sp. Y9602 10213061 YP_004212794.1 CDS Rahaq_2055 NC_015061.1 2231764 2232315 D PFAM: nitroreductase; KEGG: spe:Spro_2721 hypothetical protein; nitroreductase 2231764..2232315 Rahnella sp. Y9602 10213062 YP_004212795.1 CDS Rahaq_2056 NC_015061.1 2232539 2234488 D TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; KEGG: spe:Spro_2718 DNA topoisomerase III; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; DNA topoisomerase III 2232539..2234488 Rahnella sp. Y9602 10213063 YP_004212796.1 CDS Rahaq_2057 NC_015061.1 2234481 2234795 D PFAM: protein of unknown function DUF1496; KEGG: yen:YE2256 hypothetical protein; hypothetical protein 2234481..2234795 Rahnella sp. Y9602 10213064 YP_004212797.1 CDS Rahaq_2058 NC_015061.1 2234870 2235271 R PFAM: NUDIX hydrolase; KEGG: spe:Spro_2716 pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase; NUDIX hydrolase complement(2234870..2235271) Rahnella sp. Y9602 10213065 YP_004212798.1 CDS Rahaq_2059 NC_015061.1 2235271 2236080 R KEGG: spe:Spro_2715 exonuclease III; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III complement(2235271..2236080) Rahnella sp. Y9602 10213066 YP_004212799.1 CDS Rahaq_2060 NC_015061.1 2236336 2237910 D KEGG: spe:Spro_2617 DNA-binding transcriptional regulator TyrR; PFAM: sigma-54 factor interaction domain-containing protein; amino acid-binding ACT domain protein; SMART: AAA ATPase; PAS domain containing protein; TyrR family transcriptional regulator 2236336..2237910 Rahnella sp. Y9602 10213067 YP_004212800.1 CDS Rahaq_2061 NC_015061.1 2237988 2238491 R PFAM: Redoxin domain protein; KEGG: ypb:YPTS_2338 thiol peroxidase; redoxin domain-containing protein complement(2237988..2238491) Rahnella sp. Y9602 10213068 YP_004212801.1 CDS Rahaq_2062 NC_015061.1 2238628 2239605 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: spe:Spro_2615 mandelate racemase/muconate lactonizing protein; mandelate racemase/muconate lactonizing protein 2238628..2239605 Rahnella sp. Y9602 10213069 YP_004212802.1 CDS Rahaq_2063 NC_015061.1 2239751 2241385 D PFAM: extracellular solute-binding protein family 5; KEGG: spe:Spro_2611 extracellular solute-binding protein; family 5 extracellular solute-binding protein 2239751..2241385 Rahnella sp. Y9602 10213070 YP_004212803.1 CDS Rahaq_2064 NC_015061.1 2241450 2242652 R PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE4032 hypothetical protein; major facilitator superfamily protein complement(2241450..2242652) Rahnella sp. Y9602 10213071 YP_004212804.1 CDS Rahaq_2065 NC_015061.1 2242766 2243701 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: yen:YE4033 LysR family transcriptional regulator; LysR family transcriptional regulator 2242766..2243701 Rahnella sp. Y9602 10213072 YP_004212805.1 CDS Rahaq_2066 NC_015061.1 2243781 2244764 D PFAM: Mg2 transporter protein CorA family protein; KEGG: yen:YE2107 zinc transporter; Mg2 transporter protein CorA family protein 2243781..2244764 Rahnella sp. Y9602 10213073 YP_004212806.1 CDS Rahaq_2067 NC_015061.1 2245048 2245725 D KEGG: pam:PANA_1090 hypothetical protein; hypothetical protein 2245048..2245725 Rahnella sp. Y9602 10213074 YP_004212807.1 CDS Rahaq_2068 NC_015061.1 2245785 2246720 R PFAM: PP-loop domain protein; KEGG: pct:PC1_2316 C32 tRNA thiolase; PP-loop domain-containing protein complement(2245785..2246720) Rahnella sp. Y9602 10213075 YP_004212808.1 CDS Rahaq_2070 NC_015061.1 2247262 2247495 D PFAM: protein of unknown function DUF903; KEGG: cko:CKO_03336 hypothetical protein; hypothetical protein 2247262..2247495 Rahnella sp. Y9602 10213077 YP_004212809.1 CDS Rahaq_2071 NC_015061.1 2247528 2247770 D PFAM: protein of unknown function DUF903; KEGG: pam:PANA_1770 YgdI; hypothetical protein 2247528..2247770 Rahnella sp. Y9602 10213078 YP_004212810.1 CDS Rahaq_2072 NC_015061.1 2247887 2249686 R PFAM: Na+/solute symporter; KEGG: msu:MS1741 PutP protein; Na+/solute symporter complement(2247887..2249686) Rahnella sp. Y9602 10213079 YP_004212811.1 CDS Rahaq_2073 NC_015061.1 2249944 2251287 D KEGG: pwa:Pecwa_0310 hypothetical protein; hypothetical protein 2249944..2251287 Rahnella sp. Y9602 10213080 YP_004212812.1 CDS Rahaq_2074 NC_015061.1 2251284 2253422 D PFAM: Heparinase II/III family protein; KEGG: vsp:VS_1247 hypothetical protein; heparinase II/III family protein 2251284..2253422 Rahnella sp. Y9602 10213081 YP_004212813.1 CDS Rahaq_2075 NC_015061.1 2253433 2254209 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: spe:Spro_0121 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2253433..2254209 Rahnella sp. Y9602 10213082 YP_004212814.1 CDS Rahaq_2076 NC_015061.1 2254304 2255014 D KEGG: vsp:VS_1251 transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 2254304..2255014 Rahnella sp. Y9602 10213083 YP_004212815.1 CDS Rahaq_2077 NC_015061.1 2255267 2256133 D KEGG: tau:Tola_1039 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 2255267..2256133 Rahnella sp. Y9602 10213084 YP_004212816.1 CDS Rahaq_2078 NC_015061.1 2256242 2257540 D PFAM: major facilitator superfamily MFS_1; KEGG: cmi:CMM_0553 sugar MFS-permease; major facilitator superfamily protein 2256242..2257540 Rahnella sp. Y9602 10213085 YP_004212817.1 CDS Rahaq_2079 NC_015061.1 2257588 2260245 D PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: pjd:Pjdr2_2986 alpha-L-rhamnosidase; alpha-L-rhamnosidase 2257588..2260245 Rahnella sp. Y9602 10213086 YP_004212818.1 CDS Rahaq_2080 NC_015061.1 2260426 2263956 R KEGG: yen:YE2102 pyruvate-flavodoxin oxidoreductase; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; pyruvate ferredoxin/flavodoxin oxidoreductase complement(2260426..2263956) Rahnella sp. Y9602 10213087 YP_004212819.1 CDS Rahaq_2081 NC_015061.1 2264471 2264752 D PFAM: protein of unknown function DUF333; KEGG: pam:PANA_2012 YdbJ; hypothetical protein 2264471..2264752 Rahnella sp. Y9602 10213088 YP_004212820.1 CDS Rahaq_2082 NC_015061.1 2264803 2265225 R PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: pay:PAU_02422 heat shock protein hslj; hypothetical protein complement(2264803..2265225) Rahnella sp. Y9602 10213089 YP_004212821.1 CDS Rahaq_2083 NC_015061.1 2265428 2266531 D KEGG: ebi:EbC_25770 sugar ABC transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter 2265428..2266531 Rahnella sp. Y9602 10213090 YP_004212822.1 CDS Rahaq_2084 NC_015061.1 2266597 2267877 D PFAM: extracellular solute-binding protein family 1; KEGG: ebi:EbC_25760 sugar ABC transporter extracellular solute-binding protein; extracellular solute-binding protein 2266597..2267877 Rahnella sp. Y9602 10213091 YP_004212823.1 CDS Rahaq_2085 NC_015061.1 2267894 2268805 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_25750 sugar ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 2267894..2268805 Rahnella sp. Y9602 10213092 YP_004212824.1 CDS Rahaq_2086 NC_015061.1 2268802 2269617 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pam:PANA_4091 AraQ; binding-protein-dependent transport system inner membrane protein 2268802..2269617 Rahnella sp. Y9602 10213093 YP_004212825.1 CDS Rahaq_2087 NC_015061.1 2269638 2270567 D PFAM: metallophosphoesterase; KEGG: ebi:EbC_25730 metallophosphoesterase; metallophosphoesterase 2269638..2270567 Rahnella sp. Y9602 10213094 YP_004212826.1 CDS Rahaq_2088 NC_015061.1 2270644 2271630 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: ypb:YPTS_2324 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(2270644..2271630) Rahnella sp. Y9602 10213095 YP_004212827.1 CDS Rahaq_2089 NC_015061.1 2271873 2274599 D KEGG: spe:Spro_2599 hypothetical protein; hypothetical protein 2271873..2274599 Rahnella sp. Y9602 10213096 YP_004212828.1 CDS Rahaq_2090 NC_015061.1 2274596 2274790 D KEGG: eay:EAM_1814 lipoprotein; lipoprotein 2274596..2274790 Rahnella sp. Y9602 10213097 YP_004212829.1 CDS Rahaq_2091 NC_015061.1 2274847 2275152 D PFAM: Uncharacterised conserved protein UCP025560; KEGG: yen:YE2095 hypothetical protein; hypothetical protein 2274847..2275152 Rahnella sp. Y9602 10213098 YP_004212830.1 CDS Rahaq_2092 NC_015061.1 2275274 2275891 R PFAM: NAD(P)H dehydrogenase (quinone); KEGG: esa:ESA_01692 azoreductase; NAD(P)H dehydrogenase (quinone) complement(2275274..2275891) Rahnella sp. Y9602 10213099 YP_004212831.1 CDS Rahaq_2093 NC_015061.1 2276193 2280068 D TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase-associated domain protein; helicase domain protein; protein of unknown function DUF1605; KEGG: spe:Spro_2595 ATP-dependent RNA helicase HrpA; SMART: DEAD-like helicase ; AAA ATPase; helicase domain protein; ATP-dependent helicase HrpA 2276193..2280068 Rahnella sp. Y9602 10213100 YP_004212832.1 CDS Rahaq_2094 NC_015061.1 2280144 2281025 R KEGG: yen:YE2087 protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; peptidase S1 and S6 chymotrypsin/Hap complement(2280144..2281025) Rahnella sp. Y9602 10213101 YP_004212833.1 CDS Rahaq_2095 NC_015061.1 2281364 2281792 R KEGG: ebi:EbC_19960 hypothetical protein; hypothetical protein complement(2281364..2281792) Rahnella sp. Y9602 10213102 YP_004212834.1 CDS Rahaq_2096 NC_015061.1 2282255 2283736 R KEGG: yen:YE2085 carboxypeptidase; PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; carboxypeptidase Taq complement(2282255..2283736) Rahnella sp. Y9602 10213103 YP_004212835.1 CDS Rahaq_2097 NC_015061.1 2283720 2285063 R KEGG: spe:Spro_2591 sensor protein RstB; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase complement(2283720..2285063) Rahnella sp. Y9602 10213104 YP_004212836.1 CDS Rahaq_2098 NC_015061.1 2285060 2285791 R KEGG: spe:Spro_2590 DNA-binding transcriptional regulator RstA; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator complement(2285060..2285791) Rahnella sp. Y9602 10213105 YP_004212837.1 CDS Rahaq_2099 NC_015061.1 2286009 2286428 D KEGG: spe:Spro_2588 hypothetical protein; hypothetical protein 2286009..2286428 Rahnella sp. Y9602 10213106 YP_004212838.1 CDS Rahaq_2100 NC_015061.1 2286495 2287730 R KEGG: ebi:EbC_28870 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I; gluconate 2-dehydrogenase (acceptor) complement(2286495..2287730) Rahnella sp. Y9602 10213107 YP_004212839.1 CDS Rahaq_2101 NC_015061.1 2287727 2289490 R KEGG: ebi:EbC_28860 gluconate 2-dehydrogenase (acceptor); PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; gluconate 2-dehydrogenase (acceptor) complement(2287727..2289490) Rahnella sp. Y9602 10213108 YP_004212840.1 CDS Rahaq_2102 NC_015061.1 2289506 2290255 R KEGG: ebi:EbC_28850 gluconate 2-dehydrogenase (acceptor); gluconate 2-dehydrogenase (acceptor) complement(2289506..2290255) Rahnella sp. Y9602 10213109 YP_004212841.1 CDS Rahaq_2103 NC_015061.1 2290603 2292111 D KEGG: spe:Spro_2901 hypothetical protein; hypothetical protein 2290603..2292111 Rahnella sp. Y9602 10213110 YP_004212842.1 CDS Rahaq_2104 NC_015061.1 2292194 2292844 R KEGG: spe:Spro_2900 transcriptional regulator NarL; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; LuxR family transcriptional regulator complement(2292194..2292844) Rahnella sp. Y9602 10213111 YP_004212843.1 CDS Rahaq_2105 NC_015061.1 2292841 2294631 R KEGG: pct:PC1_2261 nitrate/nitrite sensor protein NarX; PFAM: histidine kinase dimerisation and phosphoacceptor region; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase complement(2292841..2294631) Rahnella sp. Y9602 10213112 YP_004212844.1 CDS Rahaq_2106 NC_015061.1 2294995 2296413 D KEGG: spe:Spro_2898 nitrite transporter; TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; nitrite transporter 2294995..2296413 Rahnella sp. Y9602 10213113 YP_004212845.1 CDS Rahaq_2107 NC_015061.1 2296538 2297860 D PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein; transposase IS4 family protein 2296538..2297860 Rahnella sp. Y9602 10213114 YP_004212846.1 CDS Rahaq_2108 NC_015061.1 2297916 2298188 R PFAM: protein of unknown function DUF156; KEGG: cro:ROD_29021 hypothetical protein; hypothetical protein complement(2297916..2298188) Rahnella sp. Y9602 10213115 YP_004212847.1 CDS Rahaq_2109 NC_015061.1 2298309 2299184 D PFAM: high-affinity nickel-transporter; KEGG: sew:SeSA_A3193 nickel/cobalt efflux protein RcnA; high-affinity nickel-transporter 2298309..2299184 Rahnella sp. Y9602 10213116 YP_004212848.1 CDS Rahaq_2110 NC_015061.1 2299290 2300270 D KEGG: pam:PANA_1566 Bah; alpha/beta hydrolase 2299290..2300270 Rahnella sp. Y9602 10213117 YP_004212849.1 CDS Rahaq_2111 NC_015061.1 2300319 2301248 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: yen:YE2132 LysR family transcriptional regulator; LysR family transcriptional regulator 2300319..2301248 Rahnella sp. Y9602 10213118 YP_004212850.1 CDS Rahaq_2112 NC_015061.1 2301338 2301835 D PFAM: Protein of unknown function DUF2501; KEGG: spe:Spro_0994 hypothetical protein; hypothetical protein 2301338..2301835 Rahnella sp. Y9602 10213119 YP_004212851.1 CDS Rahaq_2113 NC_015061.1 2302457 2303095 R SMART: HhH-GPD family protein; iron-sulfur cluster loop; TIGRFAM: endonuclease III; KEGG: ypb:YPTS_2230 endonuclease III; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; endonuclease III complement(2302457..2303095) Rahnella sp. Y9602 10213120 YP_004212852.1 CDS Rahaq_2114 NC_015061.1 2303088 2303786 R KEGG: yen:YE1988 electron transport complex RsxE subunit; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; PFAM: RnfA-Nqr electron transport subunit; RnfABCDGE type electron transport complex subunit E complement(2303088..2303786) Rahnella sp. Y9602 10213121 YP_004212853.1 CDS Rahaq_2115 NC_015061.1 2303779 2304411 R KEGG: ypb:YPTS_2232 electron transport complex protein RnfG; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; RnfABCDGE type electron transport complex subunit G complement(2303779..2304411) Rahnella sp. Y9602 10213122 YP_004212854.1 CDS Rahaq_2116 NC_015061.1 2304421 2305473 R KEGG: spe:Spro_2237 electron transport complex protein RnfD; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; RnfABCDGE type electron transport complex subunit D complement(2304421..2305473) Rahnella sp. Y9602 10213123 YP_004212855.1 CDS Rahaq_2117 NC_015061.1 2305474 2307591 R KEGG: spe:Spro_2239 electron transport complex, RnfABCDGE type, C subunit; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; RnfABCDGE type electron transport complex subunit C complement(2305474..2307591) Rahnella sp. Y9602 10213124 YP_004212856.1 CDS Rahaq_2118 NC_015061.1 2307581 2308147 R KEGG: spe:Spro_2240 electron transport complex protein RnfB; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: Fe-S cluster domain protein; RnfABCDGE type electron transport complex subunit B complement(2307581..2308147) Rahnella sp. Y9602 10213125 YP_004212857.1 CDS Rahaq_2119 NC_015061.1 2308147 2308728 R KEGG: yen:YE1994 Na(+)-translocating NADH-quinone reductase subunit E; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; RnfABCDGE type electron transport complex subunit A complement(2308147..2308728) Rahnella sp. Y9602 10213126 YP_004212858.1 CDS Rahaq_2120 NC_015061.1 2308769 2309209 R PFAM: Protein of unknown function DUF2569; KEGG: yen:YE1996 hypothetical protein; hypothetical protein complement(2308769..2309209) Rahnella sp. Y9602 10213127 YP_004212859.1 CDS Rahaq_2121 NC_015061.1 2309369 2310736 R KEGG: yen:YE2780 C4-dicarboxylate transporter DcuC; TIGRFAM: anaerobic c4-dicarboxylate antiporter, DcuC family; PFAM: C4-dicarboxylate anaerobic carrier-like; anaerobic C4-dicarboxylate transporter complement(2309369..2310736) Rahnella sp. Y9602 10213128 YP_004212860.1 CDS Rahaq_2122 NC_015061.1 2311053 2312261 R PFAM: monooxygenase FAD-binding; KEGG: spe:Spro_1429 hypothetical protein; monooxygenase FAD-binding protein complement(2311053..2312261) Rahnella sp. Y9602 10213129 YP_004212861.1 CDS Rahaq_2123 NC_015061.1 2312569 2313282 D KEGG: ebi:EbC_06810 transcription regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 2312569..2313282 Rahnella sp. Y9602 10213130 YP_004212862.1 CDS Rahaq_2124 NC_015061.1 2313269 2314447 D PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: ebi:EbC_06820 cystathionine gamma-synthase protein; Cys/Met metabolism pyridoxal-phosphate-dependent protein 2313269..2314447 Rahnella sp. Y9602 10213131 YP_004212863.1 CDS Rahaq_2125 NC_015061.1 2314508 2315788 D PFAM: extracellular solute-binding protein family 1; KEGG: ebi:EbC_06830 extracellular solute-binding protein, family 1; extracellular solute-binding protein 2314508..2315788 Rahnella sp. Y9602 10213132 YP_004212864.1 CDS Rahaq_2126 NC_015061.1 2315852 2316775 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_06840 ABC-type sugar transport systems, permease component; binding-protein-dependent transport system inner membrane protein 2315852..2316775 Rahnella sp. Y9602 10213133 YP_004212865.1 CDS Rahaq_2127 NC_015061.1 2316786 2317628 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_06850 ABC-type sugar transport system, permease component; binding-protein-dependent transport system inner membrane protein 2316786..2317628 Rahnella sp. Y9602 10213134 YP_004212866.1 CDS Rahaq_2128 NC_015061.1 2317633 2318727 D KEGG: ebi:EbC_06860 ABC-type sugar transport systems, ATPase component; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter 2317633..2318727 Rahnella sp. Y9602 10213135 YP_004212867.1 CDS Rahaq_2129 NC_015061.1 2318774 2320066 R PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2281 major facilitator transporter; major facilitator superfamily protein complement(2318774..2320066) Rahnella sp. Y9602 10213136 YP_004212868.1 CDS Rahaq_2130 NC_015061.1 2320207 2321106 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: yen:YE2022 LysR family transcriptional regulator; LysR family transcriptional regulator 2320207..2321106 Rahnella sp. Y9602 10213137 YP_004212869.1 CDS Rahaq_2131 NC_015061.1 2321274 2322497 D PFAM: ROK family protein; KEGG: spe:Spro_2283 ROK family protein; ROK family protein 2321274..2322497 Rahnella sp. Y9602 10213138 YP_004212870.1 CDS Rahaq_2132 NC_015061.1 2322821 2323507 D TIGRFAM: dethiobiotin synthase; KEGG: spe:Spro_2284 dethiobiotin synthase; dethiobiotin synthase 2322821..2323507 Rahnella sp. Y9602 10213139 YP_004212871.1 CDS Rahaq_2133 NC_015061.1 2323652 2323957 R KEGG: cci:CC1G_14977 hypothetical protein; hypothetical protein complement(2323652..2323957) Rahnella sp. Y9602 10213140 YP_004212872.1 CDS Rahaq_2134 NC_015061.1 2324220 2325713 D KEGG: spe:Spro_2286 EmrB/QacA family drug resistance transporter; manually curated; PFAM: major facilitator superfamily MFS_1; major facilitator superfamily protein 2324220..2325713 Rahnella sp. Y9602 10213141 YP_004212873.1 CDS Rahaq_2135 NC_015061.1 2325710 2327368 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA1345 ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein complement(2325710..2327368) Rahnella sp. Y9602 10213142 YP_004212874.1 CDS Rahaq_2136 NC_015061.1 2327418 2328419 R PFAM: extracellular solute-binding protein family 1; KEGG: pct:PC1_1221 extracellular solute-binding protein family 1; extracellular solute-binding protein complement(2327418..2328419) Rahnella sp. Y9602 10213143 YP_004212875.1 CDS Rahaq_2137 NC_015061.1 2328437 2329186 R KEGG: pct:PC1_1222 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(2328437..2329186) Rahnella sp. Y9602 10213144 YP_004212876.1 CDS Rahaq_2138 NC_015061.1 2329924 2331429 R KEGG: ypb:YPTS_2242 L-arabinose isomerase; PFAM: L-arabinose isomerase; L-arabinose isomerase complement(2329924..2331429) Rahnella sp. Y9602 10213145 YP_004212877.1 CDS Rahaq_2139 NC_015061.1 2331466 2333145 R KEGG: ypb:YPTS_2243 ribulokinase; TIGRFAM: L-ribulokinase; PFAM: Carbohydrate kinase, FGGY-like; L-ribulokinase complement(2331466..2333145) Rahnella sp. Y9602 10213146 YP_004212878.1 CDS Rahaq_2140 NC_015061.1 2333562 2334548 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: eca:ECA2273 L-arabinose-binding periplasmic protein; LacI family transcriptional regulator 2333562..2334548 Rahnella sp. Y9602 10213147 YP_004212879.1 CDS Rahaq_2141 NC_015061.1 2334552 2334773 R KEGG: eca:ECA3326 hypothetical protein; hypothetical protein complement(2334552..2334773) Rahnella sp. Y9602 10213148 YP_004212880.1 CDS Rahaq_2142 NC_015061.1 2334800 2336386 D KEGG: pct:PC1_2030 L-arabinose transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2334800..2336386 Rahnella sp. Y9602 10213149 YP_004212881.1 CDS Rahaq_2143 NC_015061.1 2336405 2337409 D PFAM: inner-membrane translocator; KEGG: ent:Ent638_2474 L-arabinose transporter permease protein; inner-membrane translocator 2336405..2337409 Rahnella sp. Y9602 10213150 YP_004212882.1 CDS Rahaq_2144 NC_015061.1 2337586 2338521 D KEGG: spe:Spro_2248 DNA-binding transcriptional regulator AraC; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 2337586..2338521 Rahnella sp. Y9602 10213151 YP_004212883.1 CDS Rahaq_2145 NC_015061.1 2338707 2339891 R TIGRFAM: mannonate dehydratase; KEGG: ddd:Dda3937_02522 mannonate dehydratase; PFAM: Mannonate dehydratase; mannonate dehydratase complement(2338707..2339891) Rahnella sp. Y9602 10213152 YP_004212884.1 CDS Rahaq_2146 NC_015061.1 2340089 2340787 D KEGG: dze:Dd1591_4111 regulatory protein GntR HTH; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 2340089..2340787 Rahnella sp. Y9602 10213153 YP_004212885.1 CDS Rahaq_2147 NC_015061.1 2340962 2342608 R TIGRFAM: cellulose synthase operon protein YhjU; KEGG: yen:YE4078 hypothetical protein; cellulose synthase operon protein YhjU complement(2340962..2342608) Rahnella sp. Y9602 10213154 YP_004212886.1 CDS Rahaq_2148 NC_015061.1 2342605 2342838 R TIGRFAM: celllulose biosynthesis operon protein BcsF/YhjT; KEGG: eca:ECA4365 hypothetical protein; celllulose biosynthesis operon protein BcsF/YhjT complement(2342605..2342838) Rahnella sp. Y9602 10213155 YP_004212887.1 CDS Rahaq_2149 NC_015061.1 2342844 2344442 R TIGRFAM: cellulose biosynthesis protein BcsE; KEGG: spe:Spro_0145 hypothetical protein; cellulose biosynthesis protein BcsE complement(2342844..2344442) Rahnella sp. Y9602 10213156 YP_004212888.1 CDS Rahaq_2150 NC_015061.1 2344645 2344845 D KEGG: spe:Spro_0146 hypothetical protein; hypothetical protein 2344645..2344845 Rahnella sp. Y9602 10213157 YP_004212889.1 CDS Rahaq_2151 NC_015061.1 2344847 2345590 D KEGG: yen:YE4075 hypothetical protein; TIGRFAM: cellulose synthase operon protein YhjQ; PFAM: Cellulose synthase operon protein YhjQ; cellulose synthase operon protein YhjQ 2344847..2345590 Rahnella sp. Y9602 10213158 YP_004212890.1 CDS Rahaq_2152 NC_015061.1 2345587 2348202 D KEGG: spe:Spro_0148 cellulose synthase catalytic subunit; TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ; cellulose synthase catalytic subunit 2345587..2348202 Rahnella sp. Y9602 10213159 YP_004212891.1 CDS Rahaq_2153 NC_015061.1 2348199 2350538 D PFAM: Cellulose synthase BcsB; KEGG: spe:Spro_0149 cellulose synthase regulator protein; Cellulose synthase BcsB 2348199..2350538 Rahnella sp. Y9602 10213160 YP_004212892.1 CDS Rahaq_2154 NC_015061.1 2350543 2353833 D PFAM: cellulose synthase operon C domain protein; Tetratricopeptide TPR_1 repeat-containing protein; KEGG: spe:Spro_0151 cellulose synthase subunit BcsC; cellulose synthase operon C domain-containing protein 2350543..2353833 Rahnella sp. Y9602 10213161 YP_004212893.1 CDS Rahaq_2155 NC_015061.1 2354457 2355293 R KEGG: spe:Spro_2076 N-formylglutamate amidohydrolase; TIGRFAM: N-formylglutamate amidohydrolase; PFAM: N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase complement(2354457..2355293) Rahnella sp. Y9602 10213162 YP_004212894.1 CDS Rahaq_2156 NC_015061.1 2355290 2356552 R TIGRFAM: imidazolonepropionase; KEGG: spe:Spro_2077 imidazolonepropionase; PFAM: amidohydrolase; imidazolonepropionase complement(2355290..2356552) Rahnella sp. Y9602 10213163 YP_004212895.1 CDS Rahaq_2157 NC_015061.1 2356723 2357541 R TIGRFAM: histidine utilization repressor; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; KEGG: dze:Dd1591_1261 transcriptional regulator, histidine utilization repressor, GntR family; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(2356723..2357541) Rahnella sp. Y9602 10213164 YP_004212896.1 CDS Rahaq_2158 NC_015061.1 2357791 2359164 D KEGG: spe:Spro_2079 N-formimino-L-glutamate deiminase; TIGRFAM: formiminoglutamate deiminase; PFAM: amidohydrolase; formiminoglutamate deiminase 2357791..2359164 Rahnella sp. Y9602 10213165 YP_004212897.1 CDS Rahaq_2159 NC_015061.1 2359161 2359742 D PFAM: protein of unknown function DUF886; KEGG: spe:Spro_2080 hypothetical protein; hypothetical protein 2359161..2359742 Rahnella sp. Y9602 10213166 YP_004212898.1 CDS Rahaq_2160 NC_015061.1 2359990 2360970 D SMART: extracellular solute-binding protein family 3; KEGG: reu:Reut_A2720 extracellular solute-binding protein; family 3 extracellular solute-binding protein 2359990..2360970 Rahnella sp. Y9602 10213167 YP_004212899.1 CDS Rahaq_2161 NC_015061.1 2360988 2361869 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddc:Dd586_2947 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2360988..2361869 Rahnella sp. Y9602 10213168 YP_004212900.1 CDS Rahaq_2162 NC_015061.1 2361869 2362654 D KEGG: ddd:Dda3937_01662 UreA carboxylase-related ABC transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2361869..2362654 Rahnella sp. Y9602 10213169 YP_004212901.1 CDS Rahaq_2163 NC_015061.1 2362778 2364328 D TIGRFAM: histidine ammonia-lyase; KEGG: ebi:EbC_14140 histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; histidine ammonia-lyase 2362778..2364328 Rahnella sp. Y9602 10213170 YP_004212902.1 CDS Rahaq_2164 NC_015061.1 2364386 2366074 D TIGRFAM: urocanate hydratase; KEGG: dda:Dd703_2641 urocanate hydratase; PFAM: Urocanase; urocanate hydratase 2364386..2366074 Rahnella sp. Y9602 10213171 YP_004212903.1 CDS Rahaq_2165 NC_015061.1 2366249 2367415 D KEGG: dac:Daci_0154 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; histidinol-phosphate aminotransferase 2366249..2367415 Rahnella sp. Y9602 10213172 YP_004212904.1 CDS Rahaq_2166 NC_015061.1 2367412 2368563 D KEGG: tmz:Tmz1t_0668 (S)-mandelate dehydrogenase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; (S)-mandelate dehydrogenase 2367412..2368563 Rahnella sp. Y9602 10213173 YP_004212905.1 CDS Rahaq_2167 NC_015061.1 2368640 2369725 D PFAM: iron-containing alcohol dehydrogenase; KEGG: ebi:EbC_14070 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 2368640..2369725 Rahnella sp. Y9602 10213174 YP_004212906.1 CDS Rahaq_2168 NC_015061.1 2369968 2370738 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: oan:Oant_3576 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2369968..2370738) Rahnella sp. Y9602 10213175 YP_004212907.1 CDS Rahaq_2169 NC_015061.1 2370738 2372060 R KEGG: smd:Smed_6307 hypothetical protein; hypothetical protein complement(2370738..2372060) Rahnella sp. Y9602 10213176 YP_004212908.1 CDS Rahaq_2170 NC_015061.1 2372063 2373403 R TIGRFAM: histidinol dehydrogenase; KEGG: oan:Oant_3581 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; histidinol dehydrogenase complement(2372063..2373403) Rahnella sp. Y9602 10213177 YP_004212909.1 CDS Rahaq_2171 NC_015061.1 2373420 2374190 R KEGG: mlo:mlr7115 ABC-transport protein, ATP-binding component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(2373420..2374190) Rahnella sp. Y9602 10213178 YP_004212910.1 CDS Rahaq_2172 NC_015061.1 2374190 2374999 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr7114 ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein complement(2374190..2374999) Rahnella sp. Y9602 10213179 YP_004212911.1 CDS Rahaq_2173 NC_015061.1 2374996 2376003 R KEGG: mlo:mlr7112 hypothetical protein; hypothetical protein complement(2374996..2376003) Rahnella sp. Y9602 10213180 YP_004212912.1 CDS Rahaq_2174 NC_015061.1 2376278 2377258 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dda:Dd703_3519 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2376278..2377258) Rahnella sp. Y9602 10213181 YP_004212913.1 CDS Rahaq_2175 NC_015061.1 2377448 2378875 D KEGG: dda:Dd703_3518 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; argininosuccinate lyase 2377448..2378875 Rahnella sp. Y9602 10213182 YP_004212914.1 CDS Rahaq_2176 NC_015061.1 2378894 2379766 D KEGG: dda:Dd703_3517 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 2378894..2379766 Rahnella sp. Y9602 10213183 YP_004212915.1 CDS Rahaq_2177 NC_015061.1 2379780 2380544 D KEGG: dda:Dd703_3516 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2379780..2380544 Rahnella sp. Y9602 10213184 YP_004212916.1 CDS Rahaq_2178 NC_015061.1 2380583 2381404 D KEGG: dda:Dd703_3515 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 2380583..2381404 Rahnella sp. Y9602 10213185 YP_004212917.1 CDS Rahaq_2179 NC_015061.1 2381426 2382280 D PFAM: polysaccharide deacetylase; KEGG: dda:Dd703_3514 polysaccharide deacetylase; polysaccharide deacetylase 2381426..2382280 Rahnella sp. Y9602 10213186 YP_004212918.1 CDS Rahaq_2180 NC_015061.1 2382273 2383175 D PFAM: polysaccharide deacetylase; KEGG: ebi:EbC_14040 polysaccharide deacetylase; polysaccharide deacetylase 2382273..2383175 Rahnella sp. Y9602 10213187 YP_004212919.1 CDS Rahaq_2181 NC_015061.1 2383168 2384523 D PFAM: MmgE/PrpD family protein; KEGG: pfo:Pfl01_2858 MmgE/PrpD; MmgE/PrpD family protein 2383168..2384523 Rahnella sp. Y9602 10213188 YP_004212920.1 CDS Rahaq_2182 NC_015061.1 2384653 2385699 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: spe:Spro_2249 oxidoreductase; oxidoreductase domain-containing protein 2384653..2385699 Rahnella sp. Y9602 10213189 YP_004212921.1 CDS Rahaq_2183 NC_015061.1 2385779 2386798 D KEGG: yen:YE2008 hypothetical protein; hypothetical protein 2385779..2386798 Rahnella sp. Y9602 10213190 YP_004212922.1 CDS Rahaq_2184 NC_015061.1 2386863 2387861 R TIGRFAM: adenosine deaminase; KEGG: yen:YE2009 adenosine deaminase; PFAM: adenosine/AMP deaminase; adenosine deaminase complement(2386863..2387861) Rahnella sp. Y9602 10213191 YP_004212923.1 CDS Rahaq_2185 NC_015061.1 2388069 2389244 R PFAM: aminotransferase class I and II; KEGG: spe:Spro_2262 aminotransferase class I and II; class I and II aminotransferase complement(2388069..2389244) Rahnella sp. Y9602 10213192 YP_004212924.1 CDS Rahaq_2186 NC_015061.1 2389304 2390917 R TIGRFAM: PTS system, maltose and glucose-specific IIBC subunit; PTS system, maltose and glucose-specific subfamily, IIC subunit; PTS system, glucose-like IIB subunint; KEGG: yen:YE2011 bifunctional PTS system maltose and glucose-specific transporter subunits IICB; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; PTS system maltose and glucose-specific transporter subunit IIBC complement(2389304..2390917) Rahnella sp. Y9602 10213193 YP_004212925.1 CDS Rahaq_2187 NC_015061.1 2391172 2392203 D KEGG: spe:Spro_2271 DNA-binding transcriptional repressor MalI; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator 2391172..2392203 Rahnella sp. Y9602 10213194 YP_004212926.1 CDS Rahaq_2188 NC_015061.1 2392401 2392772 R KEGG: eoh:ECO103_p27 colicin M resistance protein; colicin M resistance protein complement(2392401..2392772) Rahnella sp. Y9602 10213195 YP_004212927.1 CDS Rahaq_2189 NC_015061.1 2392995 2393876 D PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: ebi:EbC_20420 dehydrogenase; 6-phosphogluconate dehydrogenase 2392995..2393876 Rahnella sp. Y9602 10213196 YP_004212928.1 CDS Rahaq_2190 NC_015061.1 2394047 2395075 D PFAM: 2OG-Fe(II) oxygenase; KEGG: pfo:Pfl01_2334 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase 2394047..2395075 Rahnella sp. Y9602 10213197 YP_004212929.1 CDS Rahaq_2192 NC_015061.1 2395348 2395806 R KEGG: sme:SMc00562 transcription regulator protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR complement(2395348..2395806) Rahnella sp. Y9602 10213199 YP_004212930.1 CDS Rahaq_2193 NC_015061.1 2396008 2396421 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dal:Dalk_4724 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase 2396008..2396421 Rahnella sp. Y9602 10213200 YP_004212931.1 CDS Rahaq_2194 NC_015061.1 2396560 2397570 R TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: spe:Spro_3119 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; glyceraldehyde-3-phosphate dehydrogenase, type I complement(2396560..2397570) Rahnella sp. Y9602 10213201 YP_004212932.1 CDS Rahaq_2195 NC_015061.1 2397649 2398638 R KEGG: spe:Spro_3120 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain-containing protein; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(2397649..2398638) Rahnella sp. Y9602 10213202 YP_004212933.1 CDS Rahaq_2196 NC_015061.1 2398857 2399462 D PFAM: lytic transglycosylase catalytic; KEGG: spe:Spro_4233 lytic transglycosylase catalytic; lytic transglycosylase 2398857..2399462 Rahnella sp. Y9602 10213203 YP_004212934.1 CDS Rahaq_2197 NC_015061.1 2399586 2399948 D KEGG: pen:PSEEN2914 hypothetical protein; hypothetical protein 2399586..2399948 Rahnella sp. Y9602 10213204 YP_004212935.1 CDS Rahaq_2198 NC_015061.1 2400083 2400820 D PFAM: metallophosphoesterase; KEGG: esa:ESA_pESA3p05456 hypothetical protein; metallophosphoesterase 2400083..2400820 Rahnella sp. Y9602 10213205 YP_004212936.1 CDS Rahaq_2199 NC_015061.1 2400890 2401195 D PFAM: protein of unknown function DUF437; KEGG: ddi:DDB_G0295809 UCP029143 family protein; hypothetical protein 2400890..2401195 Rahnella sp. Y9602 10213206 YP_004212937.1 CDS Rahaq_2200 NC_015061.1 2401245 2401886 R PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: ebi:EbC_22150 metal dependent phosphohydrolase; metal-dependent phosphohydrolase HD sub domain-containing protein complement(2401245..2401886) Rahnella sp. Y9602 10213207 YP_004212938.1 CDS Rahaq_2201 NC_015061.1 2402003 2402965 D KEGG: rlg:Rleg_3129 transcriptional regulator, AraC family; PFAM: ThiJ/PfpI domain-containing protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 2402003..2402965 Rahnella sp. Y9602 10213208 YP_004212939.1 CDS Rahaq_2202 NC_015061.1 2402982 2403548 R KEGG: vap:Vapar_3245 DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I complement(2402982..2403548) Rahnella sp. Y9602 10213209 YP_004212940.1 CDS Rahaq_2203 NC_015061.1 2403848 2404396 D KEGG: act:ACLA_099330 cation diffusion facilitator; hypothetical protein 2403848..2404396 Rahnella sp. Y9602 10213210 YP_004212941.1 CDS Rahaq_2204 NC_015061.1 2404560 2405495 D KEGG: spe:Spro_2280 DNA replication terminus site-binding protein; TIGRFAM: DNA replication terminus site-binding protein; PFAM: site-binding protein DNA replication region; DNA replication terminus site-binding protein 2404560..2405495 Rahnella sp. Y9602 10213211 YP_004212942.1 CDS Rahaq_2205 NC_015061.1 2405560 2406957 R KEGG: spe:Spro_2279 fumarate hydratase; TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; Fumarase C-like; class II fumarate hydratase complement(2405560..2406957) Rahnella sp. Y9602 10213212 YP_004212943.1 CDS Rahaq_2206 NC_015061.1 2407204 2408385 D TIGRFAM: mannose-6-phosphate isomerase, class I; KEGG: spe:Spro_2277 mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I; mannose-6-phosphate isomerase 2407204..2408385 Rahnella sp. Y9602 10213213 YP_004212944.1 CDS Rahaq_2207 NC_015061.1 2408520 2410061 D PFAM: protein of unknown function DUF945; KEGG: spe:Spro_2276 hypothetical protein; hypothetical protein 2408520..2410061 Rahnella sp. Y9602 10213214 YP_004212945.1 CDS Rahaq_2208 NC_015061.1 2410211 2410882 D KEGG: ebi:EbC_12190 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2410211..2410882 Rahnella sp. Y9602 10213215 YP_004212946.1 CDS Rahaq_2209 NC_015061.1 2410869 2411642 D PFAM: Conserved hypothetical protein CHP00245; KEGG: ebi:EbC_12200 conserved uncharacterized protein; hypothetical protein 2410869..2411642 Rahnella sp. Y9602 10213216 YP_004212947.1 CDS Rahaq_2210 NC_015061.1 2411693 2412388 R KEGG: pmy:Pmen_3833 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(2411693..2412388) Rahnella sp. Y9602 10213217 YP_004212948.1 CDS Rahaq_2211 NC_015061.1 2412654 2413262 D KEGG: eca:ECA0816 hypothetical protein; hypothetical protein 2412654..2413262 Rahnella sp. Y9602 10213218 YP_004212949.1 CDS Rahaq_2212 NC_015061.1 2413301 2415031 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pam:PANA_3313 ModB; binding-protein-dependent transport system inner membrane protein complement(2413301..2415031) Rahnella sp. Y9602 10213219 YP_004212950.1 CDS Rahaq_2213 NC_015061.1 2415051 2416049 R PFAM: extracellular solute-binding protein family 1; KEGG: pam:PANA_3314 PotD; extracellular solute-binding protein complement(2415051..2416049) Rahnella sp. Y9602 10213220 YP_004212951.1 CDS Rahaq_2214 NC_015061.1 2416074 2417141 R KEGG: pam:PANA_3315 FbpC; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(2416074..2417141) Rahnella sp. Y9602 10213221 YP_004212952.1 CDS Rahaq_2215 NC_015061.1 2417385 2418155 R KEGG: spe:Spro_2302 xanthine dehydrogenase accessory protein XdhC; TIGRFAM: xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182; xanthine dehydrogenase accessory protein XdhC complement(2417385..2418155) Rahnella sp. Y9602 10213222 YP_004212953.1 CDS Rahaq_2216 NC_015061.1 2418167 2420566 R PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; manually curated; KEGG: spe:Spro_2301 xanthine dehydrogenase molybdopterin binding subunit; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; xanthine dehydrogenase molybdopterin binding subunit complement(2418167..2420566) Rahnella sp. Y9602 10213223 YP_004212954.1 CDS Rahaq_2217 NC_015061.1 2420559 2421962 R KEGG: spe:Spro_2300 xanthine dehydrogenase small subunit; TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain-containing protein; ferredoxin; CO dehydrogenase flavoprotein domain protein; xanthine dehydrogenase small subunit complement(2420559..2421962) Rahnella sp. Y9602 10213224 YP_004212955.1 CDS Rahaq_2218 NC_015061.1 2422078 2422746 R PFAM: Tetracycline transcriptional regulator YcdC domain-containing protein; regulatory protein TetR; KEGG: vap:Vapar_4749 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2422078..2422746) Rahnella sp. Y9602 10213225 YP_004212956.1 CDS Rahaq_2219 NC_015061.1 2422743 2424095 R KEGG: spe:Spro_2299 guanine deaminase; TIGRFAM: guanine deaminase; PFAM: amidohydrolase; guanine deaminase complement(2422743..2424095) Rahnella sp. Y9602 10213226 YP_004212957.1 CDS Rahaq_2220 NC_015061.1 2424216 2425391 R KEGG: spe:Spro_2298 ROK family protein; PFAM: ROK family protein; SMART: regulatory protein Crp; ROK family protein complement(2424216..2425391) Rahnella sp. Y9602 10213227 YP_004212958.1 CDS Rahaq_2221 NC_015061.1 2425931 2427181 D PFAM: extracellular solute-binding protein family 1; KEGG: spe:Spro_2297 extracellular solute-binding protein; extracellular solute-binding protein 2425931..2427181 Rahnella sp. Y9602 10213228 YP_004212959.1 CDS Rahaq_2222 NC_015061.1 2427242 2428144 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2296 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2427242..2428144 Rahnella sp. Y9602 10213229 YP_004212960.1 CDS Rahaq_2223 NC_015061.1 2428141 2428980 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2295 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2428141..2428980 Rahnella sp. Y9602 10213230 YP_004212961.1 CDS Rahaq_2224 NC_015061.1 2429007 2429960 D PFAM: PfkB domain protein; KEGG: spe:Spro_2294 ribokinase-like domain-containing protein; PfkB domain-containing protein 2429007..2429960 Rahnella sp. Y9602 10213231 YP_004212962.1 CDS Rahaq_2225 NC_015061.1 2429961 2431055 D KEGG: spe:Spro_2293 ABC transporter-related protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter 2429961..2431055 Rahnella sp. Y9602 10213232 YP_004212963.1 CDS Rahaq_2226 NC_015061.1 2431081 2432136 D PFAM: aldo/keto reductase; KEGG: ara:Arad_2859 oxidoreductase protein; aldo/keto reductase 2431081..2432136 Rahnella sp. Y9602 10213233 YP_004212964.1 CDS Rahaq_2227 NC_015061.1 2432263 2433012 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pct:PC1_2050 3-hydroxy acid dehydrogenase; short-chain dehydrogenase/reductase SDR 2432263..2433012 Rahnella sp. Y9602 10213234 YP_004212965.1 CDS Rahaq_2228 NC_015061.1 2433140 2434435 R PFAM: Xanthine/uracil/vitamin C permease; KEGG: sgl:SG1135 transport protein; xanthine/uracil/vitamin C permease complement(2433140..2434435) Rahnella sp. Y9602 10213235 YP_004212966.1 CDS Rahaq_2229 NC_015061.1 2434747 2435652 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eay:EAM_3341 LysR-family transcriptional regulator; LysR family transcriptional regulator 2434747..2435652 Rahnella sp. Y9602 10213236 YP_004212967.1 CDS Rahaq_2230 NC_015061.1 2435657 2435983 R PFAM: protein of unknown function UPF0060; KEGG: spe:Spro_2289 hypothetical protein; hypothetical protein complement(2435657..2435983) Rahnella sp. Y9602 10213237 YP_004212968.1 CDS Rahaq_2231 NC_015061.1 2436116 2436484 D PFAM: protein of unknown function DUF1283; KEGG: yen:YE2026 hypothetical protein; hypothetical protein 2436116..2436484 Rahnella sp. Y9602 10213238 YP_004212969.1 CDS Rahaq_2232 NC_015061.1 2436537 2436830 D PFAM: protein of unknown function DUF1161; KEGG: spe:Spro_2287 hypothetical protein; hypothetical protein 2436537..2436830 Rahnella sp. Y9602 10213239 YP_004212970.1 CDS Rahaq_2233 NC_015061.1 2437150 2437416 D KEGG: pct:PC1_2084 hypothetical protein; hypothetical protein 2437150..2437416 Rahnella sp. Y9602 10213240 YP_004212971.1 CDS Rahaq_2234 NC_015061.1 2437460 2439079 R KEGG: avn:Avin_30960 rhodanese-like protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; rhodanese domain-containing protein complement(2437460..2439079) Rahnella sp. Y9602 10213241 YP_004212972.1 CDS Rahaq_2235 NC_015061.1 2439072 2439677 R KEGG: pfs:PFLU3685 hypothetical protein; hypothetical protein complement(2439072..2439677) Rahnella sp. Y9602 10213242 YP_004212973.1 CDS Rahaq_2236 NC_015061.1 2439865 2440758 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: psp:PSPPH_3611 LysR family transcriptional regulator; LysR family transcriptional regulator 2439865..2440758 Rahnella sp. Y9602 10213243 YP_004212974.1 CDS Rahaq_2237 NC_015061.1 2440959 2442056 D KEGG: ebi:EbC_32590 alkanesulfonate monooxygenase; PFAM: luciferase; alkanesulfonate monooxygenase 2440959..2442056 Rahnella sp. Y9602 10213244 YP_004212975.1 CDS Rahaq_2238 NC_015061.1 2442066 2443004 D KEGG: pag:PLES_25751 periplasmic aliphatic sulfonate-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; aliphatic sulfonates ABC transporter substrate-binding protein 2442066..2443004 Rahnella sp. Y9602 10213245 YP_004212976.1 CDS Rahaq_2239 NC_015061.1 2443153 2443875 D PFAM: ThiJ/PfpI domain-containing protein; KEGG: pam:PANA_1582 hypothetical protein; ThiJ/PfpI domain-containing protein 2443153..2443875 Rahnella sp. Y9602 10213246 YP_004212977.1 CDS Rahaq_2240 NC_015061.1 2443983 2444210 D KEGG: cti:RALTA_A2347 hypothetical protein; hypothetical protein 2443983..2444210 Rahnella sp. Y9602 10213247 YP_004212978.1 CDS Rahaq_2241 NC_015061.1 2444318 2445577 R PFAM: major facilitator superfamily MFS_1; KEGG: kpu:KP1_2796 permease of the major facilitator superfamily; major facilitator superfamily protein complement(2444318..2445577) Rahnella sp. Y9602 10213248 YP_004212979.1 CDS Rahaq_2242 NC_015061.1 2445832 2447001 R KEGG: spe:Spro_2636 D-alanyl-D-alanine carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; Beta-lactamase complement(2445832..2447001) Rahnella sp. Y9602 10213249 YP_004212980.1 CDS Rahaq_2243 NC_015061.1 2447460 2449766 D TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; KEGG: spe:Spro_2637 oxidoreductase alpha (molybdopterin) subunit; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; oxidoreductase alpha (molybdopterin) subunit 2447460..2449766 Rahnella sp. Y9602 10213250 YP_004212981.1 CDS Rahaq_2244 NC_015061.1 2449916 2451859 D SMART: Cold shock protein; TIGRFAM: exoribonuclease II; VacB and RNase II family 3'-5' exoribonuclease; KEGG: spe:Spro_2638 exoribonuclease II; PFAM: ribonuclease II; Ribonuclease B OB region domain; exoribonuclease II 2449916..2451859 Rahnella sp. Y9602 10213251 YP_004212982.1 CDS Rahaq_2245 NC_015061.1 2451987 2452940 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2917 transcriptional regulator CysB-like protein; LysR family transcriptional regulator complement(2451987..2452940) Rahnella sp. Y9602 10213252 YP_004212983.1 CDS Rahaq_2246 NC_015061.1 2453133 2454077 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: spe:Spro_2452 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(2453133..2454077) Rahnella sp. Y9602 10213253 YP_004212984.1 CDS Rahaq_2247 NC_015061.1 2454290 2456572 D TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; KEGG: psa:PST_2142 glycogen operon protein GlgX; SMART: alpha amylase catalytic sub domain; glycogen debranching protein GlgX 2454290..2456572 Rahnella sp. Y9602 10213254 YP_004212985.1 CDS Rahaq_2248 NC_015061.1 2456619 2457659 R PFAM: ApbE family lipoprotein; KEGG: ebi:EbC_30280 thiamine biosynthesis lipoprotein; ApbE family lipoprotein complement(2456619..2457659) Rahnella sp. Y9602 10213255 YP_004212986.1 CDS Rahaq_2249 NC_015061.1 2457774 2458340 R KEGG: esa:ESA_01951 hypothetical protein; PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2; Smr protein/MutS2 complement(2457774..2458340) Rahnella sp. Y9602 10213256 YP_004212987.1 CDS Rahaq_2250 NC_015061.1 2458555 2459370 D TIGRFAM: mannosyl-3-phosphoglycerate phosphatase family; HAD-superfamily hydrolase, subfamily IIB; KEGG: ebi:EbC_26740 mannosyl-3-phosphoglycerate phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; mannosyl-3-phosphoglycerate phosphatase family protein 2458555..2459370 Rahnella sp. Y9602 10213257 YP_004212988.1 CDS Rahaq_2251 NC_015061.1 2459490 2460710 D KEGG: spe:Spro_2340 hypothetical protein; hypothetical protein 2459490..2460710 Rahnella sp. Y9602 10213258 YP_004212989.1 CDS Rahaq_2252 NC_015061.1 2460790 2461815 R PFAM: Integral membrane protein TerC; KEGG: esa:ESA_01799 hypothetical protein; integral membrane protein TerC complement(2460790..2461815) Rahnella sp. Y9602 10213259 YP_004212990.1 CDS Rahaq_2253 NC_015061.1 2462256 2463011 D KEGG: ddc:Dd586_2030 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; Crp/Fnr family transcriptional regulator 2462256..2463011 Rahnella sp. Y9602 10213260 YP_004212991.1 CDS Rahaq_2254 NC_015061.1 2463147 2464106 D PFAM: UspA domain-containing protein; KEGG: spe:Spro_2583 universal stress protein UspE; UspA domain-containing protein 2463147..2464106 Rahnella sp. Y9602 10213261 YP_004212992.1 CDS Rahaq_2255 NC_015061.1 2464175 2465566 R KEGG: yen:YE2077 pyridine nucleotide transhydrogenase; PFAM: NAD(P) transhydrogenase subunit beta; NAD(P)(+) transhydrogenase complement(2464175..2465566) Rahnella sp. Y9602 10213262 YP_004212993.1 CDS Rahaq_2256 NC_015061.1 2465576 2467105 R KEGG: yen:YE2078 NAD(P) transhydrogenase subunit alpha; TIGRFAM: NAD(P) transhydrogenase, subunit alpha; PFAM: alanine dehydrogenase/PNT domain protein; NAD(P) transhydrogenase subunit alpha complement(2465576..2467105) Rahnella sp. Y9602 10213263 YP_004212994.1 CDS Rahaq_2257 NC_015061.1 2467641 2468594 D PFAM: protein of unknown function DUF1471; KEGG: spe:Spro_2586 hypothetical protein; hypothetical protein 2467641..2468594 Rahnella sp. Y9602 10213264 YP_004212995.1 CDS Rahaq_2258 NC_015061.1 2468826 2469938 R KEGG: ebi:EbC_43470 renal dipeptidase; PFAM: peptidase M19 renal dipeptidase; membrane dipeptidase complement(2468826..2469938) Rahnella sp. Y9602 10213265 YP_004212996.1 CDS Rahaq_2259 NC_015061.1 2470189 2471784 D PFAM: extracellular solute-binding protein family 5; KEGG: dze:Dd1591_3993 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein 2470189..2471784 Rahnella sp. Y9602 10213266 YP_004212997.1 CDS Rahaq_2260 NC_015061.1 2471781 2472794 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_43490 dipeptide ABC transporter membrane spanning protein; binding-protein-dependent transport system inner membrane protein 2471781..2472794 Rahnella sp. Y9602 10213267 YP_004212998.1 CDS Rahaq_2261 NC_015061.1 2472791 2473717 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddd:Dda3937_03241 dipeptide transport system permease; binding-protein-dependent transport system inner membrane protein 2472791..2473717 Rahnella sp. Y9602 10213268 YP_004212999.1 CDS Rahaq_2262 NC_015061.1 2473717 2474547 D KEGG: dze:Dd1591_3990 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2473717..2474547 Rahnella sp. Y9602 10213269 YP_004213000.1 CDS Rahaq_2263 NC_015061.1 2474544 2475317 D KEGG: atu:Atu2514 ABC transporter nucleotide binding/ATPase protein (dipeptide); PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2474544..2475317 Rahnella sp. Y9602 10213270 YP_004213001.1 CDS Rahaq_2264 NC_015061.1 2475401 2476954 D PFAM: beta-lactamase; KEGG: spe:Spro_2075 beta-lactamase; beta-lactamase 2475401..2476954 Rahnella sp. Y9602 10213271 YP_004213002.1 CDS Rahaq_2265 NC_015061.1 2477164 2479143 D KEGG: dda:Dd703_4011 oxidoreductase Fe-S binding subunit; TIGRFAM: glutamate synthase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutamate synthase, small subunit 2477164..2479143 Rahnella sp. Y9602 10213272 YP_004213003.1 CDS Rahaq_2266 NC_015061.1 2479561 2480037 D PFAM: protein of unknown function DUF336; KEGG: spe:Spro_2088 hypothetical protein; hypothetical protein 2479561..2480037 Rahnella sp. Y9602 10213273 YP_004213004.1 CDS Rahaq_2267 NC_015061.1 2480116 2480685 D KEGG: eay:EAM_1911 gluconate dehydrogenase subunit; gluconate dehydrogenase subunit 2480116..2480685 Rahnella sp. Y9602 10213274 YP_004213005.1 CDS Rahaq_2268 NC_015061.1 2480678 2482282 D PFAM: FAD dependent oxidoreductase; glucose-methanol-choline oxidoreductase; KEGG: ebi:EbC_05300 glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase 2480678..2482282 Rahnella sp. Y9602 10213275 YP_004213006.1 CDS Rahaq_2269 NC_015061.1 2482305 2483627 D KEGG: spe:Spro_2085 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I; gluconate 2-dehydrogenase (acceptor) 2482305..2483627 Rahnella sp. Y9602 10213276 YP_004213007.1 CDS Rahaq_2270 NC_015061.1 2484518 2485225 D KEGG: esa:ESA_00559 hypothetical protein; hypothetical protein 2484518..2485225 Rahnella sp. Y9602 10213277 YP_004213008.1 CDS Rahaq_2271 NC_015061.1 2485647 2487314 D KEGG: spe:Spro_1995 sulfate transporter YchM; TIGRFAM: sulfate transporter; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; sulfate transporter 2485647..2487314 Rahnella sp. Y9602 10213278 YP_004213009.1 CDS Rahaq_2272 NC_015061.1 2487533 2488387 R KEGG: spe:Spro_1994 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; 2-dehydro-3-deoxyphosphooctonate aldolase complement(2487533..2488387) Rahnella sp. Y9602 10213279 YP_004213010.1 CDS Rahaq_2273 NC_015061.1 2488483 2489292 R KEGG: yen:YE2428 transcriptional regulator; transcriptional regulator complement(2488483..2489292) Rahnella sp. Y9602 10213280 YP_004213011.1 CDS Rahaq_2274 NC_015061.1 2489295 2489684 R PFAM: Invasion gene expression up-regulator SirB; KEGG: yen:YE2429 hypothetical protein; Invasion gene expression up-regulator SirB complement(2489295..2489684) Rahnella sp. Y9602 10213281 YP_004213012.1 CDS Rahaq_2275 NC_015061.1 2489704 2490573 R KEGG: spe:Spro_1991 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: methyltransferase small; protein-(glutamine-N5) methyltransferase complement(2489704..2490573) Rahnella sp. Y9602 10213282 YP_004213013.1 CDS Rahaq_2276 NC_015061.1 2490573 2491655 R KEGG: spe:Spro_1990 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; peptide chain release factor 1 complement(2490573..2491655) Rahnella sp. Y9602 10213283 YP_004213014.1 CDS Rahaq_2277 NC_015061.1 2491688 2492950 R KEGG: spe:Spro_1989 glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; Shikimate/quinate 5-dehydrogenase; glutamyl-tRNA reductase complement(2491688..2492950) Rahnella sp. Y9602 10213284 YP_004213015.1 CDS Rahaq_2278 NC_015061.1 2493213 2493836 D KEGG: ypz:YPZ3_1804 outer membrane lipoprotein LolB precursor; TIGRFAM: outer membrane lipoprotein LolB; PFAM: outer membrane lipoprotein LolB; outer membrane lipoprotein LolB 2493213..2493836 Rahnella sp. Y9602 10213285 YP_004213016.1 CDS Rahaq_2279 NC_015061.1 2493838 2494701 D TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: ypb:YPTS_2060 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 2493838..2494701 Rahnella sp. Y9602 10213286 YP_004213017.1 CDS Rahaq_2280 NC_015061.1 2494864 2495811 D TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: spe:Spro_1986 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 2494864..2495811 Rahnella sp. Y9602 10213287 YP_004213018.1 CDS Rahaq_2281 NC_015061.1 2495934 2496212 R PFAM: Protein of unknown function DUF2583; KEGG: etr:ETAE_1400 hypothetical protein; hypothetical protein complement(2495934..2496212) Rahnella sp. Y9602 10213288 YP_004213019.1 CDS Rahaq_2282 NC_015061.1 2496520 2497095 D TIGRFAM: peptidyl-tRNA hydrolase; KEGG: spe:Spro_1984 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 2496520..2497095 Rahnella sp. Y9602 10213289 YP_004213020.1 CDS Rahaq_2283 NC_015061.1 2497153 2499066 R KEGG: pae:PA2435 cation-transporting P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; heavy metal translocating P-type ATPase complement(2497153..2499066) Rahnella sp. Y9602 10213290 YP_004213021.1 CDS Rahaq_2284 NC_015061.1 2499079 2500122 R KEGG: pag:PLES_28571 hypothetical protein; PFAM: band 7 protein; SMART: band 7 protein; hypothetical protein complement(2499079..2500122) Rahnella sp. Y9602 10213291 YP_004213022.1 CDS Rahaq_2285 NC_015061.1 2500119 2501159 R KEGG: pfl:PFL_6193 SPFH domain-containing protein; PFAM: band 7 protein; SMART: band 7 protein; hypothetical protein complement(2500119..2501159) Rahnella sp. Y9602 10213292 YP_004213023.1 CDS Rahaq_2286 NC_015061.1 2501156 2503114 R PFAM: band 7 protein; KEGG: pfo:Pfl01_5670 band 7 protein; hypothetical protein complement(2501156..2503114) Rahnella sp. Y9602 10213293 YP_004213024.1 CDS Rahaq_2287 NC_015061.1 2503327 2504808 R PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: spe:Spro_1983 sulphate transporter; sulfate transporter complement(2503327..2504808) Rahnella sp. Y9602 10213294 YP_004213025.1 CDS Rahaq_2288 NC_015061.1 2505027 2506118 D KEGG: pct:PC1_2121 GTP-dependent nucleic acid-binding protein EngD; TIGRFAM: GTP-binding protein YchF; PFAM: protein of unknown function DUF933; GTP-binding protein HSR1-related; GTP-binding protein YchF 2505027..2506118 Rahnella sp. Y9602 10213295 YP_004213026.1 CDS Rahaq_2289 NC_015061.1 2506291 2506638 D KEGG: dze:Dd1591_2455 hypothetical protein; PFAM: HNH endonuclease; SMART: HNH nuclease; HNH endonuclease 2506291..2506638 Rahnella sp. Y9602 10213296 YP_004213027.1 CDS Rahaq_2290 NC_015061.1 2506849 2509056 D KEGG: ebi:EbC_16040 TonB-dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; TonB-dependent siderophore receptor 2506849..2509056 Rahnella sp. Y9602 10213297 YP_004213028.1 CDS Rahaq_2291 NC_015061.1 2509180 2510184 D PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ddd:Dda3937_00500 ISEch4 transposase; transposase IS116/IS110/IS902 family protein 2509180..2510184 Rahnella sp. Y9602 10213298 YP_004213029.1 CDS Rahaq_2292 NC_015061.1 2510484 2511668 R KEGG: esa:ESA_pESA3p05442 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase complement(2510484..2511668) Rahnella sp. Y9602 10213299 YP_004213030.1 CDS Rahaq_2293 NC_015061.1 2511665 2512363 R KEGG: enc:ECL_02241 DNA-binding response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator complement(2511665..2512363) Rahnella sp. Y9602 10213300 YP_004213031.1 CDS Rahaq_2294 NC_015061.1 2512525 2521074 R PFAM: glycosyltransferase 36 associated; glycosyltransferase 36; carbohydrate binding; KEGG: spe:Spro_3285 glycosyltransferase 36; glycosyltransferase 36 associated complement(2512525..2521074) Rahnella sp. Y9602 10213301 YP_004213032.1 CDS Rahaq_2295 NC_015061.1 2521418 2522056 D PFAM: nitroreductase; KEGG: ebi:EbC_27860 nitroreductase; nitroreductase 2521418..2522056 Rahnella sp. Y9602 10213302 YP_004213033.1 CDS Rahaq_2296 NC_015061.1 2522360 2523910 D TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: rle:RL0485 GGDEF/EAL domain-containing protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 2522360..2523910 Rahnella sp. Y9602 10213303 YP_004213034.1 CDS Rahaq_2297 NC_015061.1 2523856 2524857 R KEGG: kpn:KPN_01851 regulatory protein MarR; PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator complement(2523856..2524857) Rahnella sp. Y9602 10213304 YP_004213035.1 CDS Rahaq_2298 NC_015061.1 2524997 2525848 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: ebi:EbC_36230 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 2524997..2525848 Rahnella sp. Y9602 10213305 YP_004213036.1 CDS Rahaq_2299 NC_015061.1 2526099 2526935 D KEGG: ebi:EbC_36210 polar amino acid ABC transporter periplasmic ligand binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 2526099..2526935 Rahnella sp. Y9602 10213306 YP_004213037.1 CDS Rahaq_2300 NC_015061.1 2526939 2527568 D PFAM: Domain of unknown function DUF1989; KEGG: ebi:EbC_36200 conserved uncharacterized protein; hypothetical protein 2526939..2527568 Rahnella sp. Y9602 10213307 YP_004213038.1 CDS Rahaq_2301 NC_015061.1 2527552 2528199 D PFAM: Domain of unknown function DUF1989; KEGG: ebi:EbC_36190 conserved uncharacterized protein; hypothetical protein 2527552..2528199 Rahnella sp. Y9602 10213308 YP_004213039.1 CDS Rahaq_2302 NC_015061.1 2528203 2528856 D KEGG: ebi:EbC_36180 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 2528203..2528856 Rahnella sp. Y9602 10213309 YP_004213040.1 CDS Rahaq_2303 NC_015061.1 2528856 2529521 D KEGG: ebi:EbC_36170 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 2528856..2529521 Rahnella sp. Y9602 10213310 YP_004213041.1 CDS Rahaq_2304 NC_015061.1 2529535 2530212 D PFAM: Domain of unknown function DUF1989; KEGG: ebi:EbC_36160 conserved uncharacterized protein; hypothetical protein 2529535..2530212 Rahnella sp. Y9602 10213311 YP_004213042.1 CDS Rahaq_2305 NC_015061.1 2530346 2530990 R PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: ctu:Ctu_35470 hypothetical protein; coenzyme F420-dependent NADP oxidoreductase complement(2530346..2530990) Rahnella sp. Y9602 10213312 YP_004213043.1 CDS Rahaq_2306 NC_015061.1 2531096 2531983 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pam:PANA_0501 YafC; LysR family transcriptional regulator 2531096..2531983 Rahnella sp. Y9602 10213313 YP_004213044.1 CDS Rahaq_2307 NC_015061.1 2532009 2532425 R KEGG: xbo:XBJ1_1433 conserved hypothetical protein; exported protein; hypothetical protein complement(2532009..2532425) Rahnella sp. Y9602 10213314 YP_004213045.1 CDS Rahaq_2309 NC_015061.1 2533649 2534971 D PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein; transposase IS4 family protein 2533649..2534971 Rahnella sp. Y9602 10213316 YP_004213046.1 CDS Rahaq_2310 NC_015061.1 2535027 2537804 R KEGG: ebi:EbC_17380 NADH:flavin oxidoreductase; TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; NADH:flavin oxidoreductase/NADH oxidase; FMN-binding domain protein; flavocytochrome c complement(2535027..2537804) Rahnella sp. Y9602 10213317 YP_004213047.1 CDS Rahaq_2311 NC_015061.1 2538382 2539893 D KEGG: ebi:EbC_17370 tartrate carrier (tartrate transporter) (tartrate/succinate antiporter); TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; anion transporter 2538382..2539893 Rahnella sp. Y9602 10213318 YP_004213048.1 CDS Rahaq_2312 NC_015061.1 2539959 2540624 R KEGG: dda:Dd703_1190 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(2539959..2540624) Rahnella sp. Y9602 10213319 YP_004213049.1 CDS Rahaq_2313 NC_015061.1 2540734 2542305 D PFAM: extracellular solute-binding protein family 5; KEGG: dda:Dd703_1189 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein 2540734..2542305 Rahnella sp. Y9602 10213320 YP_004213050.1 CDS Rahaq_2314 NC_015061.1 2542302 2543147 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dda:Dd703_1188 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2542302..2543147 Rahnella sp. Y9602 10213321 YP_004213051.1 CDS Rahaq_2315 NC_015061.1 2543149 2544063 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dda:Dd703_1187 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2543149..2544063 Rahnella sp. Y9602 10213322 YP_004213052.1 CDS Rahaq_2316 NC_015061.1 2544060 2545442 D PFAM: peptidase M20; KEGG: dda:Dd703_1186 peptidase M20; peptidase M20 2544060..2545442 Rahnella sp. Y9602 10213323 YP_004213053.1 CDS Rahaq_2317 NC_015061.1 2545503 2546504 D KEGG: dda:Dd703_1185 pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; PFAM: Pyridoxal-5'-phosphate-dependent protein subunit beta; 1-aminocyclopropane-1-carboxylate deaminase 2545503..2546504 Rahnella sp. Y9602 10213324 YP_004213054.1 CDS Rahaq_2318 NC_015061.1 2546506 2547504 D PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: dda:Dd703_1184 ornithine cyclodeaminase/mu-crystallin; ornithine cyclodeaminase/mu-crystallin 2546506..2547504 Rahnella sp. Y9602 10213325 YP_004213055.1 CDS Rahaq_2319 NC_015061.1 2547497 2548366 D KEGG: dda:Dd703_1183 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; rhodanese domain-containing protein 2547497..2548366 Rahnella sp. Y9602 10213326 YP_004213056.1 CDS Rahaq_2320 NC_015061.1 2548359 2549987 R KEGG: dda:Dd703_1182 ABC transporter related; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter complement(2548359..2549987) Rahnella sp. Y9602 10213327 YP_004213057.1 CDS Rahaq_2321 NC_015061.1 2550448 2551020 D KEGG: enc:ECL_A246 hypothetical protein; hypothetical protein 2550448..2551020 Rahnella sp. Y9602 10213328 YP_004213058.1 CDS Rahaq_2322 NC_015061.1 2551581 2552186 R PFAM: Glutathione S-transferase domain; KEGG: kva:Kvar_2533 glutathione S-transferase domain protein; glutathione S-transferase complement(2551581..2552186) Rahnella sp. Y9602 10213329 YP_004213059.1 CDS Rahaq_2323 NC_015061.1 2552317 2553195 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kva:Kvar_2532 transcriptional regulator, LysR family; LysR family transcriptional regulator 2552317..2553195 Rahnella sp. Y9602 10213330 YP_004213060.1 CDS Rahaq_2324 NC_015061.1 2553264 2554121 R KEGG: psb:Psyr_3543 helix-turn-helix, AraC type:AraC-type transcriptional regulator, N-terminal; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(2553264..2554121) Rahnella sp. Y9602 10213331 YP_004213061.1 CDS Rahaq_2325 NC_015061.1 2554298 2555050 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: psb:Psyr_3542 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2554298..2555050 Rahnella sp. Y9602 10213332 YP_004213062.1 CDS Rahaq_2326 NC_015061.1 2555347 2555556 R KEGG: pam:PANA_1616 hypothetical protein; hypothetical protein complement(2555347..2555556) Rahnella sp. Y9602 10213333 YP_004213063.1 CDS Rahaq_2327 NC_015061.1 2555662 2556411 R PFAM: alpha/beta hydrolase fold; KEGG: pmy:Pmen_3124 alpha/beta hydrolase fold; alpha/beta hydrolase complement(2555662..2556411) Rahnella sp. Y9602 10213334 YP_004213064.1 CDS Rahaq_2328 NC_015061.1 2556472 2557032 R PFAM: protein of unknown function DUF1234; KEGG: nde:NIDE3617 hypothetical protein; hypothetical protein complement(2556472..2557032) Rahnella sp. Y9602 10213335 YP_004213065.1 CDS Rahaq_2329 NC_015061.1 2557157 2557600 D KEGG: rso:RSc0128 transcription regulator protein; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 2557157..2557600 Rahnella sp. Y9602 10213336 YP_004213066.1 CDS Rahaq_2330 NC_015061.1 2557820 2558299 R KEGG: ent:Ent638_1863 hypothetical protein; hypothetical protein complement(2557820..2558299) Rahnella sp. Y9602 10213337 YP_004213067.1 CDS Rahaq_2331 NC_015061.1 2558308 2559696 R KEGG: pct:PC1_2700 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase complement(2558308..2559696) Rahnella sp. Y9602 10213338 YP_004213068.1 CDS Rahaq_2332 NC_015061.1 2559696 2560373 R KEGG: ent:Ent638_1861 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator complement(2559696..2560373) Rahnella sp. Y9602 10213339 YP_004213069.1 CDS Rahaq_2333 NC_015061.1 2560580 2561416 D PFAM: MltA-interacting MipA family protein; KEGG: ent:Ent638_1860 MltA-interacting MipA family protein; MltA-interacting MipA family protein 2560580..2561416 Rahnella sp. Y9602 10213340 YP_004213070.1 CDS Rahaq_2334 NC_015061.1 2561539 2562288 R KEGG: cps:CPS_3023 hypothetical protein; hypothetical protein complement(2561539..2562288) Rahnella sp. Y9602 10213341 YP_004213071.1 CDS Rahaq_2335 NC_015061.1 2562893 2563411 D PFAM: protein of unknown function DUF1706; KEGG: eum:p1ECUMN_0142 hypothetical protein; hypothetical protein 2562893..2563411 Rahnella sp. Y9602 10213342 YP_004213072.1 CDS Rahaq_2336 NC_015061.1 2563467 2563685 D KEGG: asa:ASA_1279 hypothetical protein; hypothetical protein 2563467..2563685 Rahnella sp. Y9602 10213343 YP_004213073.1 CDS Rahaq_2337 NC_015061.1 2563934 2564176 D KEGG: kva:Kvar_2520 hypothetical protein; hypothetical protein 2563934..2564176 Rahnella sp. Y9602 10213344 YP_004213074.1 CDS Rahaq_2338 NC_015061.1 2564485 2565201 R KEGG: bpy:Bphyt_0278 transcriptional regulator, MarR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; regulatory protein ArsR complement(2564485..2565201) Rahnella sp. Y9602 10213345 YP_004213075.1 CDS Rahaq_2339 NC_015061.1 2565284 2566693 D PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_0279 major facilitator superfamily MFS_1; major facilitator superfamily protein 2565284..2566693 Rahnella sp. Y9602 10213346 YP_004213076.1 CDS Rahaq_2340 NC_015061.1 2567022 2567207 D KEGG: ure:UREG_04406 hypothetical protein; hypothetical protein 2567022..2567207 Rahnella sp. Y9602 10213347 YP_004213077.1 CDS Rahaq_2341 NC_015061.1 2567293 2567568 R KEGG: cbr:CBG22624 Hypothetical protein CBG22624; hypothetical protein complement(2567293..2567568) Rahnella sp. Y9602 10213348 YP_004213078.1 CDS Rahaq_2342 NC_015061.1 2567643 2567786 R hypothetical protein complement(2567643..2567786) Rahnella sp. Y9602 10213349 YP_004213079.1 CDS Rahaq_2343 NC_015061.1 2568362 2568814 D KEGG: ebi:EbC_28530 GCN5-related N-acetyltransferase; manually curated; PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2568362..2568814 Rahnella sp. Y9602 10213350 YP_004213080.1 CDS Rahaq_2344 NC_015061.1 2568986 2570257 R KEGG: mav:MAV_2485 Tat-translocated enzyme; TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; dyp-type peroxidase family protein complement(2568986..2570257) Rahnella sp. Y9602 10213351 YP_004213081.1 CDS Rahaq_2345 NC_015061.1 2570261 2571484 R PFAM: Peptidase M75, Imelysin; KEGG: mpa:MAP1761c hypothetical protein; peptidase M75, Imelysin complement(2570261..2571484) Rahnella sp. Y9602 10213352 YP_004213082.1 CDS Rahaq_2346 NC_015061.1 2571499 2573127 R PFAM: iron permease FTR1; KEGG: mpa:MAP1762c hypothetical protein; iron permease complement(2571499..2573127) Rahnella sp. Y9602 10213353 YP_004213083.1 CDS Rahaq_2347 NC_015061.1 2573355 2574032 R PFAM: glycosyl transferase family 2; KEGG: rsk:RSKD131_0461 glycosyl transferase family protein; family 2 glycosyl transferase complement(2573355..2574032) Rahnella sp. Y9602 10213354 YP_004213084.1 CDS Rahaq_2348 NC_015061.1 2574029 2574598 R PFAM: SNARE associated Golgi protein; KEGG: rsq:Rsph17025_3619 hypothetical protein; hypothetical protein complement(2574029..2574598) Rahnella sp. Y9602 10213355 YP_004213085.1 CDS Rahaq_2349 NC_015061.1 2574606 2575766 R KEGG: rcp:RCAP_rcc03247 ceramide glucosyltransferase; ceramide glucosyltransferase complement(2574606..2575766) Rahnella sp. Y9602 10213356 YP_004213086.1 CDS Rahaq_2350 NC_015061.1 2575958 2576596 R TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; KEGG: spe:Spro_2767 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; PFAM: KDPG and KHG aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase complement(2575958..2576596) Rahnella sp. Y9602 10213357 YP_004213087.1 CDS Rahaq_2351 NC_015061.1 2576624 2578438 R TIGRFAM: 6-phosphogluconate dehydratase; KEGG: spe:Spro_4499 phosphogluconate dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; 6-phosphogluconate dehydratase complement(2576624..2578438) Rahnella sp. Y9602 10213358 YP_004213088.1 CDS Rahaq_2353 NC_015061.1 2579790 2580404 R TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; KEGG: spe:Spro_4497 gluconate kinase 1; PFAM: shikimate kinase; thermoresistant glucokinase family carbohydrate kinase complement(2579790..2580404) Rahnella sp. Y9602 10213360 YP_004213089.1 CDS Rahaq_2354 NC_015061.1 2580824 2581102 D PFAM: protein of unknown function DUF1471; KEGG: ect:ECIAI39_0350 hypothetical protein; hypothetical protein 2580824..2581102 Rahnella sp. Y9602 10213361 YP_004213090.1 CDS Rahaq_2355 NC_015061.1 2581173 2581319 D KEGG: spe:Spro_4478 sodium/hydrogen exchanger; hypothetical protein 2581173..2581319 Rahnella sp. Y9602 10213362 YP_004213091.1 CDS Rahaq_2356 NC_015061.1 2581367 2581798 R KEGG: azl:AZL_016920 hypothetical protein; hypothetical protein complement(2581367..2581798) Rahnella sp. Y9602 10213363 YP_004213092.1 CDS Rahaq_2357 NC_015061.1 2582005 2582592 D PFAM: regulatory protein TetR; KEGG: pam:PANA_4096 hypothetical protein; TetR family transcriptional regulator 2582005..2582592 Rahnella sp. Y9602 10213364 YP_004213093.1 CDS Rahaq_2358 NC_015061.1 2582589 2583515 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: pmr:PMI2231 transport protein; hypothetical protein 2582589..2583515 Rahnella sp. Y9602 10213365 YP_004213094.1 CDS Rahaq_2359 NC_015061.1 2583564 2584622 R PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: avn:Avin_32390 zinc-containing alcohol dehydrogenase superfamily protein; molecular chaperone GroES complement(2583564..2584622) Rahnella sp. Y9602 10213366 YP_004213095.1 CDS Rahaq_2360 NC_015061.1 2584722 2585471 R TIGRFAM: histidine utilization repressor; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; KEGG: ebi:EbC_14200 transcriptional regulator, histidine utilization repressor, GntR family; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(2584722..2585471) Rahnella sp. Y9602 10213367 YP_004213096.1 CDS Rahaq_2361 NC_015061.1 2585527 2586297 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ara:Arad_8407 enoyl-CoA hydratase protein; Enoyl-CoA hydratase/isomerase complement(2585527..2586297) Rahnella sp. Y9602 10213368 YP_004213097.1 CDS Rahaq_2362 NC_015061.1 2586294 2587187 R PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: ara:Arad_8405 3-hydroxybutyryl-CoA dehydrogenase protein; 3-hydroxyacyl-CoA dehydrogenase complement(2586294..2587187) Rahnella sp. Y9602 10213369 YP_004213098.1 CDS Rahaq_2363 NC_015061.1 2587203 2588405 R KEGG: ara:Arad_8404 acyl-CoA transferases/L-carnitine dehydratase protein; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; formyl-CoA transferase complement(2587203..2588405) Rahnella sp. Y9602 10213370 YP_004213099.1 CDS Rahaq_2364 NC_015061.1 2588402 2589946 R PFAM: phenylalanine/histidine ammonia-lyase; KEGG: pwa:Pecwa_4557 histidine ammonia-lyase; phenylalanine/histidine ammonia-lyase complement(2588402..2589946) Rahnella sp. Y9602 10213371 YP_004213100.1 CDS Rahaq_2365 NC_015061.1 2589943 2590827 R PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pwa:Pecwa_4556 substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein complement(2589943..2590827) Rahnella sp. Y9602 10213372 YP_004213101.1 CDS Rahaq_2366 NC_015061.1 2590862 2591569 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pwa:Pecwa_4555 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(2590862..2591569) Rahnella sp. Y9602 10213373 YP_004213102.1 CDS Rahaq_2367 NC_015061.1 2591566 2592216 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pwa:Pecwa_4554 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(2591566..2592216) Rahnella sp. Y9602 10213374 YP_004213103.1 CDS Rahaq_2368 NC_015061.1 2592221 2593315 R KEGG: pwa:Pecwa_4553 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(2592221..2593315) Rahnella sp. Y9602 10213375 YP_004213104.1 CDS Rahaq_2369 NC_015061.1 2593577 2594425 R KEGG: cko:CKO_03040 hypothetical protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(2593577..2594425) Rahnella sp. Y9602 10213376 YP_004213105.1 CDS Rahaq_2370 NC_015061.1 2594589 2595356 R PFAM: Phytanoyl-CoA dioxygenase; KEGG: kva:Kvar_3375 phytanoyl-CoA dioxygenase; phytanoyl-CoA dioxygenase complement(2594589..2595356) Rahnella sp. Y9602 10213377 YP_004213106.1 CDS Rahaq_2371 NC_015061.1 2595504 2596400 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebi:EbC_06410 transcriptional regulator, LysR-type; LysR family transcriptional regulator complement(2595504..2596400) Rahnella sp. Y9602 10213378 YP_004213107.1 CDS Rahaq_2372 NC_015061.1 2596557 2597282 D PFAM: Pirin domain protein; KEGG: ebi:EbC_06420 pirin domain protein; pirin 2596557..2597282 Rahnella sp. Y9602 10213379 YP_004213108.1 CDS Rahaq_2373 NC_015061.1 2597743 2598090 D KEGG: ddd:Dda3937_03528 regulator for maltose metabolism; Nlp family transcriptional regulator 2597743..2598090 Rahnella sp. Y9602 10213380 YP_004213109.1 CDS Rahaq_2375 NC_015061.1 2598523 2599056 D PFAM: GCN5-related N-acetyltransferase; KEGG: kva:Kvar_1670 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2598523..2599056 Rahnella sp. Y9602 10213382 YP_004213110.1 CDS Rahaq_2376 NC_015061.1 2599345 2599905 D PFAM: GCN5-related N-acetyltransferase; KEGG: ara:Arad_7713 GCN5-family N-acetyltransferase; N-acetyltransferase GCN5 2599345..2599905 Rahnella sp. Y9602 10213383 YP_004213111.1 CDS Rahaq_2377 NC_015061.1 2599941 2601269 D TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; KEGG: ara:Arad_7721 nitrilotriacetate monooxygenase protein component A; Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A 2599941..2601269 Rahnella sp. Y9602 10213384 YP_004213112.1 CDS Rahaq_2378 NC_015061.1 2601266 2601997 D KEGG: bpu:BPUM_0349 amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2601266..2601997 Rahnella sp. Y9602 10213385 YP_004213113.1 CDS Rahaq_2379 NC_015061.1 2602022 2602690 D KEGG: ara:Arad_14101 hypothetical protein; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 2602022..2602690 Rahnella sp. Y9602 10213386 YP_004213114.1 CDS Rahaq_2380 NC_015061.1 2602706 2603506 D KEGG: bsu:BSU39500 ABC transporter (binding lipoprotein); PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 2602706..2603506 Rahnella sp. Y9602 10213387 YP_004213115.1 CDS Rahaq_2381 NC_015061.1 2603681 2605930 D KEGG: bth:BT_2578 hypothetical protein; hypothetical protein 2603681..2605930 Rahnella sp. Y9602 10213388 YP_004213116.1 CDS Rahaq_2382 NC_015061.1 2606021 2606707 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eta:ETA_04780 GltK protein; binding-protein-dependent transport system inner membrane protein complement(2606021..2606707) Rahnella sp. Y9602 10213389 YP_004213117.1 CDS Rahaq_2383 NC_015061.1 2606697 2607470 R KEGG: eta:ETA_04770 GltJ protein; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit complement(2606697..2607470) Rahnella sp. Y9602 10213390 YP_004213118.1 CDS Rahaq_2384 NC_015061.1 2607467 2608297 R KEGG: eta:ETA_04760 GltL protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(2607467..2608297) Rahnella sp. Y9602 10213391 YP_004213119.1 CDS Rahaq_2385 NC_015061.1 2608322 2609164 R KEGG: eta:ETA_04750 probable ABC transporter periplasmic-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; family 3 extracellular solute-binding protein complement(2608322..2609164) Rahnella sp. Y9602 10213392 YP_004213120.1 CDS Rahaq_2386 NC_015061.1 2609494 2610381 R KEGG: eta:ETA_17170 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; uroporphyrin-III C-methyltransferase complement(2609494..2610381) Rahnella sp. Y9602 10213393 YP_004213121.1 CDS Rahaq_2387 NC_015061.1 2610378 2613050 R PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: eta:ETA_17180 nitrate reductase; molybdopterin oxidoreductase complement(2610378..2613050) Rahnella sp. Y9602 10213394 YP_004213122.1 CDS Rahaq_2388 NC_015061.1 2613047 2617222 R KEGG: eta:ETA_17190 nitrite reductase [NAD(P)H] large subunit; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; nitrite reductase [NAD(P)H], small subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite reductase (NAD(P)H) large subunit complement(2613047..2617222) Rahnella sp. Y9602 10213395 YP_004213123.1 CDS Rahaq_2389 NC_015061.1 2617245 2618042 R TIGRFAM: nitrate ABC transporter ATPase subunits C and D; PFAM: ABC transporter related; KEGG: eta:ETA_17200 nitrate transport protein; SMART: AAA ATPase; nitrate ABC transporter ATPases C and D complement(2617245..2618042) Rahnella sp. Y9602 10213396 YP_004213124.1 CDS Rahaq_2390 NC_015061.1 2618052 2618966 R KEGG: eta:ETA_17210 nitrate transporter permease component; TIGRFAM: nitrate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; nitrate ABC transporter inner membrane subunit complement(2618052..2618966) Rahnella sp. Y9602 10213397 YP_004213125.1 CDS Rahaq_2391 NC_015061.1 2618979 2620241 R KEGG: eta:ETA_17220 nitrate-binding protein; nitrate-binding protein complement(2618979..2620241) Rahnella sp. Y9602 10213398 YP_004213126.1 CDS Rahaq_2392 NC_015061.1 2620523 2621740 R PFAM: ANTAR domain protein; KEGG: eta:ETA_17230 nitrate-and nitrite-responsive positive regulator; hypothetical protein complement(2620523..2621740) Rahnella sp. Y9602 10213399 YP_004213127.1 CDS Rahaq_2393 NC_015061.1 2621841 2622107 R PFAM: protein of unknown function UPF0153; KEGG: alv:Alvin_3286 protein of unknown function UPF0153; hypothetical protein complement(2621841..2622107) Rahnella sp. Y9602 10213400 YP_004213128.1 CDS Rahaq_2394 NC_015061.1 2622104 2623675 R KEGG: seh:SeHA_C4731 hypothetical protein; hypothetical protein complement(2622104..2623675) Rahnella sp. Y9602 10213401 YP_004213129.1 CDS Rahaq_2395 NC_015061.1 2623743 2624837 R KEGG: seh:SeHA_C4730 hypothetical protein; hypothetical protein complement(2623743..2624837) Rahnella sp. Y9602 10213402 YP_004213130.1 CDS Rahaq_2396 NC_015061.1 2624862 2625776 R KEGG: enc:ECL_00748 regulatory protein, DeoR; DeoR family transcriptional regulator complement(2624862..2625776) Rahnella sp. Y9602 10213403 YP_004213131.1 CDS Rahaq_2397 NC_015061.1 2626073 2627161 R KEGG: enc:ECL_00707 hypothetical protein; hypothetical protein complement(2626073..2627161) Rahnella sp. Y9602 10213404 YP_004213132.1 CDS Rahaq_2398 NC_015061.1 2627531 2628961 R PFAM: glycoside hydrolase family 1; KEGG: pct:PC1_2140 cryptic 6-phospho-beta-glucosidase; glycoside hydrolase complement(2627531..2628961) Rahnella sp. Y9602 10213405 YP_004213133.1 CDS Rahaq_2399 NC_015061.1 2628982 2630454 R TIGRFAM: PTS system, glucose-like IIB subunint; KEGG: yen:YE1256 PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; PTS system glucose-like transporter subunit IIB complement(2628982..2630454) Rahnella sp. Y9602 10213406 YP_004213134.1 CDS Rahaq_2400 NC_015061.1 2630745 2631773 D KEGG: ebi:EbC_17330 regulatory protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator 2630745..2631773 Rahnella sp. Y9602 10213407 YP_004213135.1 CDS Rahaq_2401 NC_015061.1 2632199 2634283 D TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; KEGG: ebi:EbC_03720 sensory box protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2632199..2634283 Rahnella sp. Y9602 10213408 YP_004213136.1 CDS Rahaq_2402 NC_015061.1 2634938 2635672 D KEGG: ebi:EbC_45130 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 2634938..2635672 Rahnella sp. Y9602 10213409 YP_004213137.1 CDS Rahaq_2403 NC_015061.1 2635665 2636687 D TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ebi:EbC_45140 oligopeptide ABC transporter ATP-binding protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2635665..2636687 Rahnella sp. Y9602 10213410 YP_004213138.1 CDS Rahaq_2404 NC_015061.1 2636684 2637799 D TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ent:Ent638_0752 oligopeptide/dipeptide ABC transporter ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2636684..2637799 Rahnella sp. Y9602 10213411 YP_004213139.1 CDS Rahaq_2405 NC_015061.1 2637796 2639313 D PFAM: extracellular solute-binding protein family 5; KEGG: ebi:EbC_45160 oligopeptide ABC transporter oligopeptide-binding protein; family 5 extracellular solute-binding protein 2637796..2639313 Rahnella sp. Y9602 10213412 YP_004213140.1 CDS Rahaq_2406 NC_015061.1 2639331 2640275 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_45170 oligopeptide ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 2639331..2640275 Rahnella sp. Y9602 10213413 YP_004213141.1 CDS Rahaq_2407 NC_015061.1 2640277 2641152 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_45180 oligopeptide ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 2640277..2641152 Rahnella sp. Y9602 10213414 YP_004213142.1 CDS Rahaq_2408 NC_015061.1 2641183 2642790 D KEGG: ebi:EbC_45190 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 2641183..2642790 Rahnella sp. Y9602 10213415 YP_004213143.1 CDS Rahaq_2409 NC_015061.1 2643094 2644008 D PFAM: dihydrodipicolinate synthetase; KEGG: set:SEN3356 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 2643094..2644008 Rahnella sp. Y9602 10213416 YP_004213144.1 CDS Rahaq_2410 NC_015061.1 2644141 2644905 D KEGG: pmy:Pmen_2861 ferric iron reductase; hypothetical protein 2644141..2644905 Rahnella sp. Y9602 10213417 YP_004213145.1 CDS Rahaq_2411 NC_015061.1 2645011 2645349 D KEGG: sil:SPO0591 TRAP dicarboxylate transporter, DctP subunit; hypothetical protein 2645011..2645349 Rahnella sp. Y9602 10213418 YP_004213146.1 CDS Rahaq_2412 NC_015061.1 2645542 2646861 D KEGG: spe:Spro_2084 major facilitator transporter; major facilitator superfamily transporter 2645542..2646861 Rahnella sp. Y9602 10213419 YP_004213147.1 CDS Rahaq_2413 NC_015061.1 2646864 2647718 D PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: rer:RER_12170 RpiR family transcriptional regulator; RpiR family transcriptional regulator 2646864..2647718 Rahnella sp. Y9602 10213420 YP_004213148.1 CDS Rahaq_2414 NC_015061.1 2647783 2648871 D KEGG: dda:Dd703_2634 iron-containing alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase; glycerol dehydrogenase 2647783..2648871 Rahnella sp. Y9602 10213421 YP_004213149.1 CDS Rahaq_2415 NC_015061.1 2649454 2650569 R PFAM: creatinase; peptidase M24; KEGG: dda:Dd703_0948 peptidase M24; creatinase complement(2649454..2650569) Rahnella sp. Y9602 10213422 YP_004213150.1 CDS Rahaq_2416 NC_015061.1 2650587 2651810 R PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: ddc:Dd586_3215 peptidase M20; peptidase M20 complement(2650587..2651810) Rahnella sp. Y9602 10213423 YP_004213151.1 CDS Rahaq_2417 NC_015061.1 2651828 2653462 R KEGG: ddc:Dd586_3214 ABC transporter; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter complement(2651828..2653462) Rahnella sp. Y9602 10213424 YP_004213152.1 CDS Rahaq_2418 NC_015061.1 2653462 2654289 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddd:Dda3937_03186 ABC transporter permease; binding-protein-dependent transport system inner membrane protein complement(2653462..2654289) Rahnella sp. Y9602 10213425 YP_004213153.1 CDS Rahaq_2419 NC_015061.1 2654282 2655229 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddd:Dda3937_03185 ABC transporter inner membrane protein; binding-protein-dependent transport system inner membrane protein complement(2654282..2655229) Rahnella sp. Y9602 10213426 YP_004213154.1 CDS Rahaq_2420 NC_015061.1 2655245 2656840 R PFAM: extracellular solute-binding protein family 5; KEGG: dda:Dd703_0953 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein complement(2655245..2656840) Rahnella sp. Y9602 10213427 YP_004213155.1 CDS Rahaq_2421 NC_015061.1 2656843 2658159 R PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: dda:Dd703_0954 peptidase dimerisation domain protein; peptidase M20 complement(2656843..2658159) Rahnella sp. Y9602 10213428 YP_004213156.1 CDS Rahaq_2422 NC_015061.1 2658237 2659010 D KEGG: dda:Dd703_0955 transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 2658237..2659010 Rahnella sp. Y9602 10213429 YP_004213157.1 CDS Rahaq_2423 NC_015061.1 2659593 2660492 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pct:PC1_4115 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2659593..2660492) Rahnella sp. Y9602 10213430 YP_004213158.1 CDS Rahaq_2424 NC_015061.1 2660500 2661321 R PFAM: peptidase M55 D-aminopeptidase; KEGG: dze:Dd1591_3975 peptidase M55 D-aminopeptidase; peptidase M55 D-aminopeptidase complement(2660500..2661321) Rahnella sp. Y9602 10213431 YP_004213159.1 CDS Rahaq_2425 NC_015061.1 2661412 2662476 R PFAM: peptidase S58 DmpA; KEGG: ddd:Dda3937_03248 D-aminopeptidease; peptidase S58 DmpA complement(2661412..2662476) Rahnella sp. Y9602 10213432 YP_004213160.1 CDS Rahaq_2426 NC_015061.1 2662507 2663418 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dda:Dd703_0144 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(2662507..2663418) Rahnella sp. Y9602 10213433 YP_004213161.1 CDS Rahaq_2427 NC_015061.1 2663428 2664348 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_43570 oligopeptide/dipeptide ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein complement(2663428..2664348) Rahnella sp. Y9602 10213434 YP_004213162.1 CDS Rahaq_2428 NC_015061.1 2664491 2666035 R PFAM: extracellular solute-binding protein family 5; KEGG: dda:Dd703_0146 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein complement(2664491..2666035) Rahnella sp. Y9602 10213435 YP_004213163.1 CDS Rahaq_2429 NC_015061.1 2666072 2667940 R KEGG: ebi:EbC_43590 oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter complement(2666072..2667940) Rahnella sp. Y9602 10213436 YP_004213164.1 CDS Rahaq_2430 NC_015061.1 2667971 2668936 R PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pam:PANA_4041 YcjG; mandelate racemase/muconate lactonizing protein complement(2667971..2668936) Rahnella sp. Y9602 10213437 YP_004213165.1 CDS Rahaq_2431 NC_015061.1 2668936 2669946 R PFAM: protein of unknown function DUF1611; KEGG: pam:PANA_4040 hypothetical protein; hypothetical protein complement(2668936..2669946) Rahnella sp. Y9602 10213438 YP_004213166.1 CDS Rahaq_2432 NC_015061.1 2670232 2671311 R PFAM: porin Gram-negative type; KEGG: spe:Spro_2839 porin; porin complement(2670232..2671311) Rahnella sp. Y9602 10213439 YP_004213167.1 CDS Rahaq_2433 NC_015061.1 2671874 2672029 D hypothetical protein 2671874..2672029 Rahnella sp. Y9602 10213440 YP_004213168.1 CDS Rahaq_2434 NC_015061.1 2672084 2673796 R KEGG: yen:YE1748 ABC transporter ATP-binding protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter complement(2672084..2673796) Rahnella sp. Y9602 10213441 YP_004213169.1 CDS Rahaq_2435 NC_015061.1 2673902 2674207 R KEGG: gtn:GTNG_2814 prophage LambdaBa01, membrane protein; hypothetical protein complement(2673902..2674207) Rahnella sp. Y9602 10213442 YP_004213170.1 CDS Rahaq_2436 NC_015061.1 2674222 2674782 R KEGG: mno:Mnod_2480 peptidase C14 caspase catalytic subunit P20; hypothetical protein complement(2674222..2674782) Rahnella sp. Y9602 10213443 YP_004213171.1 CDS Rahaq_2437 NC_015061.1 2675012 2675875 R PFAM: aminotransferase class IV; KEGG: tau:Tola_0563 aminotransferase class IV; class IV aminotransferase complement(2675012..2675875) Rahnella sp. Y9602 10213444 YP_004213172.1 CDS Rahaq_2438 NC_015061.1 2676045 2676284 R KEGG: ebi:EbC_09020 major facilitator superfamily transporter; hypothetical protein complement(2676045..2676284) Rahnella sp. Y9602 10213445 YP_004213173.1 CDS Rahaq_2439 NC_015061.1 2676381 2677061 R TIGRFAM: respiratory nitrate reductase, subunit gamma; KEGG: spe:Spro_2880 respiratory nitrate reductase, subunit gamma; PFAM: Nitrate reductase subunit gamma; respiratory nitrate reductase subunit gamma complement(2676381..2677061) Rahnella sp. Y9602 10213446 YP_004213174.1 CDS Rahaq_2440 NC_015061.1 2677058 2677780 R TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; KEGG: pct:PC1_2257 nitrate reductase molybdenum cofactor assembly chaperone; PFAM: TorD-like chaperone; nitrate reductase molybdenum cofactor assembly chaperone complement(2677058..2677780) Rahnella sp. Y9602 10213447 YP_004213175.1 CDS Rahaq_2441 NC_015061.1 2677780 2679315 R TIGRFAM: nitrate reductase, subunit beta; KEGG: ebi:EbC_35040 nitrate reductase 1 beta chain; nitrate reductase, subunit beta complement(2677780..2679315) Rahnella sp. Y9602 10213448 YP_004213176.1 CDS Rahaq_2442 NC_015061.1 2679312 2683076 R TIGRFAM: nitrate reductase, subunit alpha; KEGG: pwa:Pecwa_2564 nitrate reductase, subunit alpha; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; nitrate reductase subunit alpha complement(2679312..2683076) Rahnella sp. Y9602 10213449 YP_004213177.1 CDS Rahaq_2443 NC_015061.1 2683462 2684481 D PFAM: Mg2 transporter protein CorA family protein; KEGG: spe:Spro_2558 Mg2 transporter protein CorA family protein; Mg2 transporter protein CorA family protein 2683462..2684481 Rahnella sp. Y9602 10213450 YP_004213178.1 CDS Rahaq_2444 NC_015061.1 2684503 2686206 R PFAM: Cl- channel voltage-gated family protein; CBS domain containing protein; KEGG: eta:ETA_29020 Cl-channel, voltage gated; Cl- channel voltage-gated family protein complement(2684503..2686206) Rahnella sp. Y9602 10213451 YP_004213179.1 CDS Rahaq_2445 NC_015061.1 2686213 2686446 R KEGG: ebi:EbC_28780 conserved uncharacterized protein; hypothetical protein complement(2686213..2686446) Rahnella sp. Y9602 10213452 YP_004213180.1 CDS Rahaq_2446 NC_015061.1 2686620 2686934 D PFAM: plasmid maintenance system killer; KEGG: pct:PC1_3184 plasmid maintenance system killer; plasmid maintenance system killer protein 2686620..2686934 Rahnella sp. Y9602 10213453 YP_004213181.1 CDS Rahaq_2447 NC_015061.1 2686988 2687305 D TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: pct:PC1_3183 XRE family plasmid maintenance system antidote protein; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 2686988..2687305 Rahnella sp. Y9602 10213454 YP_004213182.1 CDS Rahaq_2448 NC_015061.1 2687420 2688997 R PFAM: extracellular solute-binding protein family 5; KEGG: spe:Spro_2911 extracellular solute-binding protein; family 5 extracellular solute-binding protein complement(2687420..2688997) Rahnella sp. Y9602 10213455 YP_004213183.1 CDS Rahaq_2449 NC_015061.1 2689140 2689817 R KEGG: spe:Spro_2912 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(2689140..2689817) Rahnella sp. Y9602 10213456 YP_004213184.1 CDS Rahaq_2450 NC_015061.1 2689810 2690694 R KEGG: spe:Spro_2913 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(2689810..2690694) Rahnella sp. Y9602 10213457 YP_004213185.1 CDS Rahaq_2451 NC_015061.1 2690684 2691562 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2914 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(2690684..2691562) Rahnella sp. Y9602 10213458 YP_004213186.1 CDS Rahaq_2452 NC_015061.1 2691568 2692620 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2915 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(2691568..2692620) Rahnella sp. Y9602 10213459 YP_004213187.1 CDS Rahaq_2453 NC_015061.1 2692620 2694188 R PFAM: extracellular solute-binding protein family 5; KEGG: spe:Spro_2916 4-phytase; family 5 extracellular solute-binding protein complement(2692620..2694188) Rahnella sp. Y9602 10213460 YP_004213188.1 CDS Rahaq_2454 NC_015061.1 2694473 2695162 R PFAM: ChaC family protein; KEGG: spe:Spro_2918 ChaC family protein; ChaC family protein complement(2694473..2695162) Rahnella sp. Y9602 10213461 YP_004213189.1 CDS Rahaq_2455 NC_015061.1 2695512 2695745 R PFAM: ChaB family protein; KEGG: ctu:Ctu_24170 cation transport regulator; ChaB family protein complement(2695512..2695745) Rahnella sp. Y9602 10213462 YP_004213190.1 CDS Rahaq_2456 NC_015061.1 2696217 2697317 D KEGG: spe:Spro_2920 calcium/sodium:proton antiporter; TIGRFAM: calcium/proton exchanger; PFAM: sodium/calcium exchanger membrane region; calcium/proton exchanger 2696217..2697317 Rahnella sp. Y9602 10213463 YP_004213191.1 CDS Rahaq_2457 NC_015061.1 2697434 2698222 R PFAM: PhoH family protein; KEGG: ypb:YPTS_2005 hypothetical protein; PhoH family protein complement(2697434..2698222) Rahnella sp. Y9602 10213464 YP_004213192.1 CDS Rahaq_2458 NC_015061.1 2698286 2698729 R KEGG: tet:TTHERM_00666900 hypothetical protein; hypothetical protein complement(2698286..2698729) Rahnella sp. Y9602 10213465 YP_004213193.1 CDS Rahaq_2459 NC_015061.1 2698883 2700031 R KEGG: spe:Spro_3463 N-acetylmuramoyl-L-alanine amidase I; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; cell wall hydrolase/autolysin complement(2698883..2700031) Rahnella sp. Y9602 10213466 YP_004213194.1 CDS Rahaq_2460 NC_015061.1 2700202 2701497 R KEGG: ebi:EbC_26230 heme-binding periplasmic protein involved in iron transport; TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; dyp-type peroxidase family protein complement(2700202..2701497) Rahnella sp. Y9602 10213467 YP_004213195.1 CDS Rahaq_2461 NC_015061.1 2701653 2702780 R PFAM: Peptidase M75, Imelysin; KEGG: spe:Spro_2928 hypothetical protein; peptidase M75, Imelysin complement(2701653..2702780) Rahnella sp. Y9602 10213468 YP_004213196.1 CDS Rahaq_2462 NC_015061.1 2702825 2703676 R PFAM: iron permease FTR1; KEGG: spe:Spro_2929 iron permease FTR1; iron permease complement(2702825..2703676) Rahnella sp. Y9602 10213469 YP_004213197.1 CDS Rahaq_2463 NC_015061.1 2703924 2705408 R KEGG: spe:Spro_2930 sodium/proline symporter; TIGRFAM: sodium/proline symporter; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; sodium/proline symporter complement(2703924..2705408) Rahnella sp. Y9602 10213470 YP_004213198.1 CDS Rahaq_2464 NC_015061.1 2705919 2709893 D KEGG: spe:Spro_2931 trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Proline dehydrogenase; Aldehyde Dehydrogenase; delta-1-pyrroline-5-carboxylate dehydrogenase 2705919..2709893 Rahnella sp. Y9602 10213471 YP_004213199.1 CDS Rahaq_2465 NC_015061.1 2710293 2711045 R KEGG: spe:Spro_2934 amino-acid ABC transporter ATP-binding protein YecC; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter complement(2710293..2711045) Rahnella sp. Y9602 10213472 YP_004213200.1 CDS Rahaq_2466 NC_015061.1 2711042 2711710 R KEGG: ebi:EbC_26310 L-cystine ABC transporter permease protein; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit complement(2711042..2711710) Rahnella sp. Y9602 10213473 YP_004213201.1 CDS Rahaq_2467 NC_015061.1 2711781 2712581 R KEGG: spe:Spro_2936 cystine transporter subunit; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; family 3 extracellular solute-binding protein complement(2711781..2712581) Rahnella sp. Y9602 10213474 YP_004213202.1 CDS Rahaq_2468 NC_015061.1 2712717 2713727 R KEGG: ypz:YPZ3_1882 D-cysteine desulfhydrase; TIGRFAM: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; PFAM: Pyridoxal-5'-phosphate-dependent protein subunit beta; D-cysteine desulfhydrase complement(2712717..2713727) Rahnella sp. Y9602 10213475 YP_004213203.1 CDS Rahaq_2469 NC_015061.1 2713916 2714422 R KEGG: spe:Spro_2938 flagella biosynthesis protein FliZ; flagella biosynthesis protein FliZ complement(2713916..2714422) Rahnella sp. Y9602 10213476 YP_004213204.1 CDS Rahaq_2470 NC_015061.1 2714477 2715199 R KEGG: spe:Spro_2939 flagellar biosynthesis sigma factor; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; RNA polymerase sigma 28 subunit FliA/WhiG complement(2714477..2715199) Rahnella sp. Y9602 10213477 YP_004213205.1 CDS Rahaq_2471 NC_015061.1 2715507 2716787 R PFAM: flagellin domain protein; KEGG: ebi:EbC_26380 flagellin; flagellin domain-containing protein complement(2715507..2716787) Rahnella sp. Y9602 10213478 YP_004213206.1 CDS Rahaq_2472 NC_015061.1 2717163 2718599 D PFAM: flagellar hook-associated 2 domain-containing protein; flagellar hook-associated protein 2 domain-containing protein; flagellin hook IN repeat protein; KEGG: ebi:EbC_26390 flagellar hook-associated protein 2; flagellar hook-associated 2 domain-containing protein 2717163..2718599 Rahnella sp. Y9602 10213479 YP_004213207.1 CDS Rahaq_2473 NC_015061.1 2718614 2719051 D KEGG: spe:Spro_2942 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; flagellar protein FliS 2718614..2719051 Rahnella sp. Y9602 10213480 YP_004213208.1 CDS Rahaq_2474 NC_015061.1 2719026 2719388 D PFAM: flagellar export chaperone; KEGG: yen:YE2526 flagellar biosynthesis protein FliT; flagellar export chaperone 2719026..2719388 Rahnella sp. Y9602 10213481 YP_004213209.1 CDS Rahaq_2475 NC_015061.1 2719601 2720455 D KEGG: spe:Spro_2944 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 2719601..2720455 Rahnella sp. Y9602 10213482 YP_004213210.1 CDS Rahaq_2476 NC_015061.1 2720574 2720750 D PFAM: Protein of unknown function DUF2566; KEGG: spe:Spro_2735 hypothetical protein; hypothetical protein 2720574..2720750 Rahnella sp. Y9602 10213483 YP_004213211.1 CDS Rahaq_2477 NC_015061.1 2720845 2721003 R PFAM: protein of unknown function UPF0057; KEGG: ent:Ent638_3147 hypothetical protein; hypothetical protein complement(2720845..2721003) Rahnella sp. Y9602 10213484 YP_004213212.1 CDS Rahaq_2478 NC_015061.1 2721074 2721328 R KEGG: fbc:FB2170_06295 hypothetical protein; hypothetical protein complement(2721074..2721328) Rahnella sp. Y9602 10213485 YP_004213213.1 CDS Rahaq_2479 NC_015061.1 2721370 2721891 D KEGG: esa:ESA_01819 hypothetical protein; hypothetical protein 2721370..2721891 Rahnella sp. Y9602 10213486 YP_004213214.1 CDS Rahaq_2480 NC_015061.1 2722125 2722400 D KEGG: rba:RB4784 arylsulfatase A precursor; hypothetical protein 2722125..2722400 Rahnella sp. Y9602 10213487 YP_004213215.1 CDS Rahaq_2481 NC_015061.1 2722470 2722739 R KEGG: bcv:Bcav_1971 malto-oligosyltrehalose trehalohydrolase; hypothetical protein complement(2722470..2722739) Rahnella sp. Y9602 10213488 YP_004213216.1 CDS Rahaq_2482 NC_015061.1 2722898 2723098 D hypothetical protein 2722898..2723098 Rahnella sp. Y9602 10213489 YP_004213217.1 CDS Rahaq_2483 NC_015061.1 2723164 2723337 R hypothetical protein complement(2723164..2723337) Rahnella sp. Y9602 10213490 YP_004213218.1 CDS Rahaq_2484 NC_015061.1 2723668 2724132 D PFAM: GCN5-related N-acetyltransferase; KEGG: sgl:SG1900 acetyltransferase; N-acetyltransferase GCN5 2723668..2724132 Rahnella sp. Y9602 10213491 YP_004213219.1 CDS Rahaq_2485 NC_015061.1 2724213 2724452 R KEGG: ebi:EbC_30240 conserved uncharacterized protein; hypothetical protein complement(2724213..2724452) Rahnella sp. Y9602 10213492 YP_004213220.1 CDS Rahaq_2486 NC_015061.1 2724597 2725502 R manually curated; KEGG: eta:ETA_18610 hypothetical protein; hypothetical protein complement(2724597..2725502) Rahnella sp. Y9602 10213493 YP_004213221.1 CDS Rahaq_2487 NC_015061.1 2725506 2725751 D manually curated; hypothetical protein 2725506..2725751 Rahnella sp. Y9602 10213494 YP_004213222.1 CDS Rahaq_2488 NC_015061.1 2726607 2726921 R KEGG: yen:YE2536 flagellar hook-basal body protein FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex subunit FliE complement(2726607..2726921) Rahnella sp. Y9602 10213495 YP_004213223.1 CDS Rahaq_2489 NC_015061.1 2727204 2728913 D KEGG: spe:Spro_2947 flagellar MS-ring protein; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; flagellar M-ring protein FliF 2727204..2728913 Rahnella sp. Y9602 10213496 YP_004213224.1 CDS Rahaq_2490 NC_015061.1 2728910 2729902 D KEGG: spe:Spro_2948 flagellar motor switch protein G; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; flagellar motor switch protein FliG 2728910..2729902 Rahnella sp. Y9602 10213497 YP_004213225.1 CDS Rahaq_2491 NC_015061.1 2729895 2730680 D PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: spe:Spro_2949 flagellar assembly protein H; flagellar assembly protein FliH/type III secretion system HrpE 2729895..2730680 Rahnella sp. Y9602 10213498 YP_004213226.1 CDS Rahaq_2492 NC_015061.1 2730680 2732044 D TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; KEGG: spe:Spro_2950 flagellum-specific ATP synthase; SMART: AAA ATPase; flagellar protein export ATPase FliI 2730680..2732044 Rahnella sp. Y9602 10213499 YP_004213227.1 CDS Rahaq_2493 NC_015061.1 2732066 2732512 D KEGG: ypb:YPTS_1828 flagellar biosynthesis chaperone; TIGRFAM: flagellar export protein FliJ; PFAM: flagellar export FliJ family protein; flagellar export protein FliJ 2732066..2732512 Rahnella sp. Y9602 10213500 YP_004213228.1 CDS Rahaq_2494 NC_015061.1 2732509 2733897 D PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: ebi:EbC_26610 flagellar hook-length control protein; flagellar hook-length control protein-like protein 2732509..2733897 Rahnella sp. Y9602 10213501 YP_004213229.1 CDS Rahaq_2495 NC_015061.1 2734106 2734606 D PFAM: flagellar basal body-associated protein FliL; KEGG: spe:Spro_2953 flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL 2734106..2734606 Rahnella sp. Y9602 10213502 YP_004213230.1 CDS Rahaq_2496 NC_015061.1 2734614 2735636 D KEGG: yen:YE2544 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM 2734614..2735636 Rahnella sp. Y9602 10213503 YP_004213231.1 CDS Rahaq_2497 NC_015061.1 2735629 2736045 D KEGG: yen:YE2545 flagellar motor switch protein FliN; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliN 2735629..2736045 Rahnella sp. Y9602 10213504 YP_004213232.1 CDS Rahaq_2498 NC_015061.1 2736045 2736482 D TIGRFAM: flagellar biosynthetic protein FliO; KEGG: ypm:YP_1571 flagellar biosynthesis protein; flagellar biosynthetic protein FliO 2736045..2736482 Rahnella sp. Y9602 10213505 YP_004213233.1 CDS Rahaq_2499 NC_015061.1 2736479 2737261 D KEGG: spe:Spro_2957 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; flagellar biosynthetic protein FliP 2736479..2737261 Rahnella sp. Y9602 10213506 YP_004213234.1 CDS Rahaq_2500 NC_015061.1 2737429 2737698 D KEGG: ebi:EbC_26670 flagellar biosynthesis protein; TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; flagellar biosynthetic protein FliQ 2737429..2737698 Rahnella sp. Y9602 10213507 YP_004213235.1 CDS Rahaq_2501 NC_015061.1 2737702 2738487 D manually curated; TIGRFAM: flagellar biosynthetic protein FliR; KEGG: yen:YE2549 flagellar biosynthesis protein FliR; PFAM: type III secretion system inner membrane R protein; flagellar biosynthetic protein FliR 2737702..2738487 Rahnella sp. Y9602 10213508 YP_004213236.1 CDS Rahaq_2502 NC_015061.1 2738493 2739623 R KEGG: spe:Spro_1650 23S rRNA methyluridine methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumB; PFAM: (Uracil-5)-methyltransferase; 23S rRNA (uracil-5-)-methyltransferase RumB complement(2738493..2739623) Rahnella sp. Y9602 10213509 YP_004213237.1 CDS Rahaq_2503 NC_015061.1 2739708 2740154 R PFAM: Protein of unknown function DUF2593; KEGG: spe:Spro_1649 hypothetical protein; hypothetical protein complement(2739708..2740154) Rahnella sp. Y9602 10213510 YP_004213238.1 CDS Rahaq_2504 NC_015061.1 2740222 2741067 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_1648 putrescine transporter subunit membrane component of ABC superfamily; binding-protein-dependent transport system inner membrane protein complement(2740222..2741067) Rahnella sp. Y9602 10213511 YP_004213239.1 CDS Rahaq_2505 NC_015061.1 2741064 2742017 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: efe:EFER_0999 putrescine transporter subunit: membrane component of ABC superfamily; binding-protein-dependent transport system inner membrane protein complement(2741064..2742017) Rahnella sp. Y9602 10213512 YP_004213240.1 CDS Rahaq_2506 NC_015061.1 2742030 2743163 R TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; KEGG: yen:YE1485 putrescine transporter ATP-binding subunit; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase complement(2742030..2743163) Rahnella sp. Y9602 10213513 YP_004213241.1 CDS Rahaq_2507 NC_015061.1 2743431 2744540 R PFAM: extracellular solute-binding protein family 1; KEGG: yen:YE1484 putrescine transporter subunit: periplasmic-binding component of ABC superfamily; extracellular solute-binding protein complement(2743431..2744540) Rahnella sp. Y9602 10213514 YP_004213242.1 CDS Rahaq_2508 NC_015061.1 2744972 2745454 R PFAM: Sensory transduction regulator, KEGG: spe:Spro_1644 hypothetical protein; Sensory transduction regulator complement(2744972..2745454) Rahnella sp. Y9602 10213515 YP_004213243.1 CDS Rahaq_2509 NC_015061.1 2745603 2746505 R KEGG: spe:Spro_1643 alpha-L-glutamate ligase; TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp; alpha-L-glutamate ligase complement(2745603..2746505) Rahnella sp. Y9602 10213516 YP_004213244.1 CDS Rahaq_2510 NC_015061.1 2746524 2747246 R PFAM: nitroreductase; KEGG: kpu:KP1_1845 nitroreductase A; nitroreductase complement(2746524..2747246) Rahnella sp. Y9602 10213517 YP_004213245.1 CDS Rahaq_2511 NC_015061.1 2747532 2747798 D KEGG: enc:ECL_02823 glutaredoxin 1; TIGRFAM: glutaredoxin, GrxA family; PFAM: glutaredoxin; GrxA family glutaredoxin 2747532..2747798 Rahnella sp. Y9602 10213518 YP_004213246.1 CDS Rahaq_2512 NC_015061.1 2747877 2748248 R KEGG: spe:Spro_1640 hypothetical protein; hypothetical protein complement(2747877..2748248) Rahnella sp. Y9602 10213519 YP_004213247.1 CDS Rahaq_2513 NC_015061.1 2748572 2750254 D KEGG: ypb:YPTS_1454 hypothetical protein; TIGRFAM: YidE/YbjL duplication; PFAM: YidE/YbjL duplication domain-containing protein; TrkA-C domain protein; hypothetical protein 2748572..2750254 Rahnella sp. Y9602 10213520 YP_004213248.1 CDS Rahaq_2514 NC_015061.1 2750703 2750981 D KEGG: ath:AT5G17970 disease resistance protein (TIR-NBS-LRR class); hypothetical protein 2750703..2750981 Rahnella sp. Y9602 10213521 YP_004213249.1 CDS Rahaq_2515 NC_015061.1 2751144 2752157 D KEGG: shl:Shal_1303 hypothetical protein; hypothetical protein 2751144..2752157 Rahnella sp. Y9602 10213522 YP_004213250.1 CDS Rahaq_2516 NC_015061.1 2752168 2752407 R KEGG: spo:SPBC2G2.17c beta-glucosidase Psu2 (predicted); beta-glucosidase complement(2752168..2752407) Rahnella sp. Y9602 10213523 YP_004213251.1 CDS Rahaq_2517 NC_015061.1 2753004 2753369 R KEGG: pmx:PERMA_0932 signal transduction response regulator; hypothetical protein complement(2753004..2753369) Rahnella sp. Y9602 10213524 YP_004213252.1 CDS Rahaq_2518 NC_015061.1 2753506 2755161 R KEGG: ypb:YPTS_3565 hypothetical protein; hypothetical protein complement(2753506..2755161) Rahnella sp. Y9602 10213525 YP_004213253.1 CDS Rahaq_2519 NC_015061.1 2755165 2755704 R KEGG: ypb:YPTS_3566 hypothetical protein; hypothetical protein complement(2755165..2755704) Rahnella sp. Y9602 10213526 YP_004213254.1 CDS Rahaq_2520 NC_015061.1 2755679 2756401 R KEGG: ypb:YPTS_3567 phage gene; phage protein complement(2755679..2756401) Rahnella sp. Y9602 10213527 YP_004213255.1 CDS Rahaq_2521 NC_015061.1 2756391 2756825 R PFAM: tail assembly chaperone gp38; KEGG: plu:plu4369 hypothetical protein; tail assembly chaperone gp38 complement(2756391..2756825) Rahnella sp. Y9602 10213528 YP_004213256.1 CDS Rahaq_2522 NC_015061.1 2756838 2759531 R KEGG: see:SNSL254_A2918 GP19; hypothetical protein complement(2756838..2759531) Rahnella sp. Y9602 10213529 YP_004213257.1 CDS Rahaq_2523 NC_015061.1 2759541 2760128 R KEGG: eum:ECUMN_0991 hypothetical protein; hypothetical protein complement(2759541..2760128) Rahnella sp. Y9602 10213530 YP_004213258.1 CDS Rahaq_2524 NC_015061.1 2760121 2761305 R KEGG: sea:SeAg_B2785 phage protein; phage protein complement(2760121..2761305) Rahnella sp. Y9602 10213531 YP_004213259.1 CDS Rahaq_2525 NC_015061.1 2761298 2761630 R PFAM: Protein of unknown function DUF2590; KEGG: ypb:YPTS_3572 phage gene; hypothetical protein complement(2761298..2761630) Rahnella sp. Y9602 10213532 YP_004213260.1 CDS Rahaq_2526 NC_015061.1 2761630 2763939 R KEGG: enc:ECL_02840 tail tape measure protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region; phage tail tape measure protein, TP901 family complement(2761630..2763939) Rahnella sp. Y9602 10213533 YP_004213261.1 CDS Rahaq_2527 NC_015061.1 2764127 2764384 R KEGG: seh:SeHA_C3479 phage protein; phage protein complement(2764127..2764384) Rahnella sp. Y9602 10213534 YP_004213262.1 CDS Rahaq_2528 NC_015061.1 2764505 2764879 R KEGG: ddd:Dda3937_02563 hypothetical protein; hypothetical protein complement(2764505..2764879) Rahnella sp. Y9602 10213535 YP_004213263.1 CDS Rahaq_2529 NC_015061.1 2764876 2765217 R KEGG: ddc:Dd586_0752 hypothetical protein; hypothetical protein complement(2764876..2765217) Rahnella sp. Y9602 10213536 YP_004213264.1 CDS Rahaq_2530 NC_015061.1 2765214 2765510 R PFAM: holin family 2; KEGG: ypb:YPTS_3577 holin family protein 2; holin family 2 complement(2765214..2765510) Rahnella sp. Y9602 10213537 YP_004213265.1 CDS Rahaq_2531 NC_015061.1 2765524 2765976 R PFAM: Protein of unknown function DUF2597; KEGG: enc:ECL_02845 tail tube protein; hypothetical protein complement(2765524..2765976) Rahnella sp. Y9602 10213538 YP_004213266.1 CDS Rahaq_2532 NC_015061.1 2765979 2767106 R PFAM: Protein of unknown function DUF2586; KEGG: ypb:YPTS_3579 phage gene; hypothetical protein complement(2765979..2767106) Rahnella sp. Y9602 10213539 YP_004213267.1 CDS Rahaq_2533 NC_015061.1 2767116 2767805 R KEGG: ypb:YPTS_3580 phage gene; phage protein complement(2767116..2767805) Rahnella sp. Y9602 10213540 YP_004213268.1 CDS Rahaq_2534 NC_015061.1 2767802 2768308 R KEGG: sea:SeAg_B2795 hypothetical protein; hypothetical protein complement(2767802..2768308) Rahnella sp. Y9602 10213541 YP_004213269.1 CDS Rahaq_2535 NC_015061.1 2768305 2768757 R PFAM: head completion protein; KEGG: eum:ECUMN_0979 head completion/stabilization protein (GpL) from bacteriophage origin; head completion protein complement(2768305..2768757) Rahnella sp. Y9602 10213542 YP_004213270.1 CDS Rahaq_2536 NC_015061.1 2768851 2769042 R KEGG: seh:SeHA_C3489 hypothetical protein; hypothetical protein complement(2768851..2769042) Rahnella sp. Y9602 10213543 YP_004213271.1 CDS Rahaq_2537 NC_015061.1 2769039 2769752 R PFAM: small terminase subunit; KEGG: ddc:Dd586_0745 small terminase subunit; small terminase subunit complement(2769039..2769752) Rahnella sp. Y9602 10213544 YP_004213272.1 CDS Rahaq_2538 NC_015061.1 2769755 2770789 R KEGG: ddd:Dda3937_02572 hypothetical protein; TIGRFAM: phage major capsid protein, P2 family; PFAM: major capsid protein P2; phage major capsid protein, P2 family complement(2769755..2770789) Rahnella sp. Y9602 10213545 YP_004213273.1 CDS Rahaq_2539 NC_015061.1 2770856 2771695 R PFAM: capsid scaffolding; KEGG: ypy:YPK_0898 capsid scaffolding protein; capsid scaffolding complement(2770856..2771695) Rahnella sp. Y9602 10213546 YP_004213274.1 CDS Rahaq_2540 NC_015061.1 2771836 2773623 D KEGG: ddd:Dda3937_02574 hypothetical protein; hypothetical protein 2771836..2773623 Rahnella sp. Y9602 10213547 YP_004213275.1 CDS Rahaq_2541 NC_015061.1 2773620 2774651 D KEGG: ypy:YPK_0896 PBSX family phage portal protein; TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein; phage portal protein, PBSX family 2773620..2774651 Rahnella sp. Y9602 10213548 YP_004213276.1 CDS Rahaq_2542 NC_015061.1 2774648 2774962 D PFAM: transcriptional activator Ogr/delta; KEGG: eum:ECUMN_0973 hypothetical protein; transcriptional activator Ogr/delta 2774648..2774962 Rahnella sp. Y9602 10213549 YP_004213277.1 CDS Rahaq_2543 NC_015061.1 2774945 2775151 R KEGG: enc:ECL_02856 hypothetical protein; hypothetical protein complement(2774945..2775151) Rahnella sp. Y9602 10213550 YP_004213278.1 CDS Rahaq_2544 NC_015061.1 2775254 2777410 R PFAM: replication gene A; KEGG: dda:Dd703_3837 replication gene A; replication protein A complement(2775254..2777410) Rahnella sp. Y9602 10213551 YP_004213279.1 CDS Rahaq_2545 NC_015061.1 2777411 2777671 R KEGG: sei:SPC_0877 hypothetical protein; hypothetical protein complement(2777411..2777671) Rahnella sp. Y9602 10213552 YP_004213280.1 CDS Rahaq_2546 NC_015061.1 2777745 2778173 R KEGG: ypb:YPTS_3591 hypothetical protein; hypothetical protein complement(2777745..2778173) Rahnella sp. Y9602 10213553 YP_004213281.1 CDS Rahaq_2547 NC_015061.1 2778181 2778507 R KEGG: ddd:Dda3937_01769 hypothetical protein; hypothetical protein complement(2778181..2778507) Rahnella sp. Y9602 10213554 YP_004213282.1 CDS Rahaq_2548 NC_015061.1 2778510 2778713 R KEGG: ypb:YPTS_3593 hypothetical protein; hypothetical protein complement(2778510..2778713) Rahnella sp. Y9602 10213555 YP_004213283.1 CDS Rahaq_2549 NC_015061.1 2778723 2779232 R KEGG: ypb:YPTS_3594 regulatory CII family protein; regulatory CII family protein complement(2778723..2779232) Rahnella sp. Y9602 10213556 YP_004213284.1 CDS Rahaq_2550 NC_015061.1 2779265 2779486 R KEGG: sbo:SBO_0749 hypothetical protein; hypothetical protein complement(2779265..2779486) Rahnella sp. Y9602 10213557 YP_004213285.1 CDS Rahaq_2551 NC_015061.1 2779628 2780188 D PFAM: CI repressor; KEGG: ddc:Dd586_0730 CI repressor; CI repressor 2779628..2780188 Rahnella sp. Y9602 10213558 YP_004213286.1 CDS Rahaq_2552 NC_015061.1 2780197 2781120 D KEGG: ypb:YPTS_3597 hypothetical protein; hypothetical protein 2780197..2781120 Rahnella sp. Y9602 10213559 YP_004213287.1 CDS Rahaq_2553 NC_015061.1 2781137 2782117 D KEGG: vvy:VV1784 hypothetical protein; hypothetical protein 2781137..2782117 Rahnella sp. Y9602 10213560 YP_004213288.1 CDS Rahaq_2554 NC_015061.1 2782208 2783263 D PFAM: integrase family protein; KEGG: stt:t3400 bacteriophage integrase; integrase family protein 2782208..2783263 Rahnella sp. Y9602 10213561 YP_004213289.1 CDS Rahaq_2555 NC_015061.1 2783315 2783503 R hypothetical protein complement(2783315..2783503) Rahnella sp. Y9602 10213562 YP_004213290.1 CDS Rahaq_2556 NC_015061.1 2783523 2784008 D KEGG: ses:SARI_00912 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; type VI secretion system effector 2783523..2784008 Rahnella sp. Y9602 10213563 YP_004213291.1 CDS Rahaq_2557 NC_015061.1 2784019 2784384 D KEGG: bge:BC1002_4564 hypothetical protein; hypothetical protein 2784019..2784384 Rahnella sp. Y9602 10213564 YP_004213292.1 CDS Rahaq_2558 NC_015061.1 2784348 2784824 D KEGG: pay:PAU_01439 hypothetical protein; hypothetical protein 2784348..2784824 Rahnella sp. Y9602 10213565 YP_004213293.1 CDS Rahaq_2559 NC_015061.1 2784885 2785196 R KEGG: pwa:Pecwa_2865 hypothetical protein; hypothetical protein complement(2784885..2785196) Rahnella sp. Y9602 10213566 YP_004213294.1 CDS Rahaq_2560 NC_015061.1 2785282 2785647 R KEGG: bmj:BMULJ_05376 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(2785282..2785647) Rahnella sp. Y9602 10213567 YP_004213295.1 CDS Rahaq_2561 NC_015061.1 2785809 2786921 R PFAM: porin Gram-negative type; KEGG: spe:Spro_3264 outer membrane porin protein C; porin complement(2785809..2786921) Rahnella sp. Y9602 10213568 YP_004213296.1 CDS Rahaq_2562 NC_015061.1 2787364 2787651 R KEGG: zma:100383431 hypothetical protein LOC100383431; hypothetical protein complement(2787364..2787651) Rahnella sp. Y9602 10213569 YP_004213297.1 CDS Rahaq_2563 NC_015061.1 2787644 2788159 R PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_1428 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(2787644..2788159) Rahnella sp. Y9602 10213570 YP_004213298.1 CDS Rahaq_2564 NC_015061.1 2788429 2789034 D PFAM: phosphoesterase PA-phosphatase related; KEGG: spe:Spro_1634 undecaprenyl pyrophosphate phosphatase; SMART: phosphoesterase PA-phosphatase related; undecaprenyl-diphosphatase 2788429..2789034 Rahnella sp. Y9602 10213571 YP_004213299.1 CDS Rahaq_2565 NC_015061.1 2789106 2790317 R KEGG: spe:Spro_1628 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; Beta-lactamase complement(2789106..2790317) Rahnella sp. Y9602 10213572 YP_004213300.1 CDS Rahaq_2566 NC_015061.1 2790626 2790967 D PFAM: GlpM family protein; KEGG: ebi:EbC_15730 GlpM family protein; GlpM family protein 2790626..2790967 Rahnella sp. Y9602 10213573 YP_004213301.1 CDS Rahaq_2567 NC_015061.1 2791060 2791773 D TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; KEGG: eta:ETA_21870 hydrolase; HAD-superfamily hydrolase 2791060..2791773 Rahnella sp. Y9602 10213574 YP_004213302.1 CDS Rahaq_2568 NC_015061.1 2791777 2792700 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ddd:Dda3937_01926 LysR family regulatory protein; LysR family transcriptional regulator complement(2791777..2792700) Rahnella sp. Y9602 10213575 YP_004213303.1 CDS Rahaq_2569 NC_015061.1 2792857 2794278 D PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: pam:PANA_3275 CndP1; peptidase M20 2792857..2794278 Rahnella sp. Y9602 10213576 YP_004213304.1 CDS Rahaq_2570 NC_015061.1 2794275 2795558 D KEGG: dda:Dd703_2930 major facilitator superfamily MFS_1; major facilitator superfamily protein 2794275..2795558 Rahnella sp. Y9602 10213577 YP_004213305.1 CDS Rahaq_2571 NC_015061.1 2795625 2796776 R KEGG: yen:YE0966 hypothetical protein; hypothetical protein complement(2795625..2796776) Rahnella sp. Y9602 10213578 YP_004213306.1 CDS Rahaq_2572 NC_015061.1 2797094 2798167 D KEGG: esa:ESA_00809 hypothetical protein; hypothetical protein 2797094..2798167 Rahnella sp. Y9602 10213579 YP_004213307.1 CDS Rahaq_2573 NC_015061.1 2798383 2799750 D TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: set:SEN3571 transporter; sugar (Glycoside-Pentoside-Hexuronide) transporter 2798383..2799750 Rahnella sp. Y9602 10213580 YP_004213308.1 CDS Rahaq_2574 NC_015061.1 2799781 2802105 D PFAM: glycoside hydrolase family 31; KEGG: esa:ESA_04154 alpha-xylosidase YicI; glycoside hydrolase 2799781..2802105 Rahnella sp. Y9602 10213581 YP_004213309.1 CDS Rahaq_2575 NC_015061.1 2802174 2803361 R KEGG: spe:Spro_0102 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(2802174..2803361) Rahnella sp. Y9602 10213582 YP_004213310.1 CDS Rahaq_2576 NC_015061.1 2803543 2804742 R PFAM: inner-membrane translocator; KEGG: yen:YE4119 sugar transport system permease protein; inner-membrane translocator complement(2803543..2804742) Rahnella sp. Y9602 10213583 YP_004213311.1 CDS Rahaq_2577 NC_015061.1 2804735 2806276 R TIGRFAM: D-xylose ABC transporter ATPase subunit; PFAM: ABC transporter related; KEGG: ebi:EbC_32960 D-xylose ABC transporter ATPase subunit; SMART: AAA ATPase; D-xylose ABC transporter ATPase complement(2804735..2806276) Rahnella sp. Y9602 10213584 YP_004213312.1 CDS Rahaq_2578 NC_015061.1 2806342 2807337 R KEGG: ypb:YPTS_4107 D-xylose transporter subunit XylF; TIGRFAM: D-xylose ABC transporter periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; D-xylose ABC transporter periplasmic substrate-binding protein complement(2806342..2807337) Rahnella sp. Y9602 10213585 YP_004213313.1 CDS Rahaq_2579 NC_015061.1 2807716 2809035 D TIGRFAM: xylose isomerase; KEGG: enc:ECL_00201 xylose isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel; xylose isomerase 2807716..2809035 Rahnella sp. Y9602 10213586 YP_004213314.1 CDS Rahaq_2580 NC_015061.1 2809127 2810578 D KEGG: spe:Spro_0097 xylulokinase; TIGRFAM: xylulokinase; PFAM: Carbohydrate kinase, FGGY-like; xylulokinase 2809127..2810578 Rahnella sp. Y9602 10213587 YP_004213315.1 CDS Rahaq_2581 NC_015061.1 2810771 2811061 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: spe:Spro_1383 autoinducer-2 (AI-2) modifying protein LsrG; antibiotic biosynthesis monooxygenase complement(2810771..2811061) Rahnella sp. Y9602 10213588 YP_004213316.1 CDS Rahaq_2582 NC_015061.1 2811065 2811940 R PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: xbo:XBJ1_4104 aldolase with ribulose-phoshate binding barrel; deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase complement(2811065..2811940) Rahnella sp. Y9602 10213589 YP_004213317.1 CDS Rahaq_2583 NC_015061.1 2811960 2812976 R KEGG: ypb:YPTS_0573 ABC transporter perplasmic sugar binding protein; sugar ABC transporter perplasmic protein complement(2811960..2812976) Rahnella sp. Y9602 10213590 YP_004213318.1 CDS Rahaq_2584 NC_015061.1 2812990 2814015 R PFAM: inner-membrane translocator; KEGG: ypi:YpsIP31758_3523 autoinducer AI-2 ABC transporter permease protein LsrD; inner-membrane translocator complement(2812990..2814015) Rahnella sp. Y9602 10213591 YP_004213319.1 CDS Rahaq_2585 NC_015061.1 2814015 2815091 R PFAM: inner-membrane translocator; KEGG: ecr:ECIAI1_1526 AI2 transporter ; membrane component of ABC superfamily; inner-membrane translocator complement(2814015..2815091) Rahnella sp. Y9602 10213592 YP_004213320.1 CDS Rahaq_2586 NC_015061.1 2815085 2816647 R KEGG: yen:YE0528 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(2815085..2816647) Rahnella sp. Y9602 10213593 YP_004213321.1 CDS Rahaq_2587 NC_015061.1 2816879 2817853 D PFAM: sugar-binding domain-containing protein; regulatory protein Crp; KEGG: yen:YE0529 transcriptional regulatory protein; DeoR family transcriptional regulator 2816879..2817853 Rahnella sp. Y9602 10213594 YP_004213322.1 CDS Rahaq_2588 NC_015061.1 2817924 2819516 D PFAM: Carbohydrate kinase, FGGY-like; KEGG: spe:Spro_1382 autoinducer-2 (AI-2) kinase; Carbohydrate kinase, FGGY-like protein 2817924..2819516 Rahnella sp. Y9602 10213595 YP_004213323.1 CDS Rahaq_2589 NC_015061.1 2819574 2820572 R KEGG: dze:Dd1591_1740 2-keto-3-deoxygluconate permease; TIGRFAM: 2-keto-3-deoxygluconate transporter; PFAM: 2-keto-3-deoxygluconate permease; 2-keto-3-deoxygluconate transporter complement(2819574..2820572) Rahnella sp. Y9602 10213596 YP_004213324.1 CDS Rahaq_2590 NC_015061.1 2820832 2821497 R TIGRFAM: transaldolase; KEGG: yen:YE1979 fructose-6-phosphate aldolase; PFAM: Transaldolase; transaldolase complement(2820832..2821497) Rahnella sp. Y9602 10213597 YP_004213325.1 CDS Rahaq_2591 NC_015061.1 2821645 2822544 D TIGRFAM: glycyl-radical enzyme activating protein family; KEGG: yen:YE0645 pyruvate formate-lyase 3 activating enzyme; PFAM: Radical SAM domain protein; glycyl-radical enzyme activating protein family 2821645..2822544 Rahnella sp. Y9602 10213598 YP_004213326.1 CDS Rahaq_2592 NC_015061.1 2822550 2824982 D TIGRFAM: pyruvate formate-lyase; KEGG: ecl:EcolC_2821 pyruvate formate-lyase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; pyruvate formate-lyase 2822550..2824982 Rahnella sp. Y9602 10213599 YP_004213327.1 CDS Rahaq_2593 NC_015061.1 2825043 2825786 D KEGG: spe:Spro_2643 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator 2825043..2825786 Rahnella sp. Y9602 10213600 YP_004213328.1 CDS Rahaq_2594 NC_015061.1 2825830 2826525 R KEGG: yen:YE1976 L-ribulose-5-phosphate 4-epimerase; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein; L-ribulose-5-phosphate 4-epimerase complement(2825830..2826525) Rahnella sp. Y9602 10213601 YP_004213329.1 CDS Rahaq_2595 NC_015061.1 2826798 2827016 D KEGG: enc:ECL_01750 osmotically inducible lipoprotein B; osmotically inducible lipoprotein B 2826798..2827016 Rahnella sp. Y9602 10213602 YP_004213330.1 CDS Rahaq_2596 NC_015061.1 2827247 2827576 R KEGG: efe:EFER_1672 translation initiation factor SUI1; TIGRFAM: translation initiation factor SUI1; PFAM: translation initiation factor SUI1; translation initiation factor SUI1 complement(2827247..2827576) Rahnella sp. Y9602 10213603 YP_004213331.1 CDS Rahaq_2597 NC_015061.1 2827589 2828317 R TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: set:SEN1326 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase complement(2827589..2828317) Rahnella sp. Y9602 10213604 YP_004213332.1 CDS Rahaq_2598 NC_015061.1 2828509 2828796 D KEGG: spe:Spro_2649 hypothetical protein; hypothetical protein 2828509..2828796 Rahnella sp. Y9602 10213605 YP_004213333.1 CDS Rahaq_2599 NC_015061.1 2828891 2830060 R KEGG: yen:YE1968 tetratricopeptide repeat protein; hypothetical protein complement(2828891..2830060) Rahnella sp. Y9602 10213606 YP_004213334.1 CDS Rahaq_2600 NC_015061.1 2830067 2830378 R KEGG: spe:Spro_2651 hypothetical protein; hypothetical protein complement(2830067..2830378) Rahnella sp. Y9602 10213607 YP_004213335.1 CDS Rahaq_2601 NC_015061.1 2830646 2831401 R PFAM: phosphoesterase PA-phosphatase related; KEGG: spe:Spro_2652 phosphatidylglycerophosphatase B; SMART: phosphoesterase PA-phosphatase related; Phosphatidylglycerophosphatase complement(2830646..2831401) Rahnella sp. Y9602 10213608 YP_004213336.1 CDS Rahaq_2602 NC_015061.1 2831692 2832282 D TIGRFAM: GTP cyclohydrolase II; KEGG: spe:Spro_2653 GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II; GTP cyclohydrolase II 2831692..2832282 Rahnella sp. Y9602 10213609 YP_004213337.1 CDS Rahaq_2603 NC_015061.1 2832356 2835028 R KEGG: spe:Spro_2654 aconitate hydratase; TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain-containing protein; aconitate hydratase 1 complement(2832356..2835028) Rahnella sp. Y9602 10213610 YP_004213338.1 CDS Rahaq_2604 NC_015061.1 2835219 2836193 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2656 transcriptional regulator CysB; LysR family transcriptional regulator complement(2835219..2836193) Rahnella sp. Y9602 10213611 YP_004213339.1 CDS Rahaq_2605 NC_015061.1 2836544 2839141 R SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; TIGRFAM: DNA topoisomerase I; KEGG: spe:Spro_2657 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; DNA topoisomerase type IA zn finger domain protein; DNA topoisomerase I zinc ribbon domain protein; DNA topoisomerase I complement(2836544..2839141) Rahnella sp. Y9602 10213612 YP_004213340.1 CDS Rahaq_2606 NC_015061.1 2839605 2839856 D PFAM: Protein of unknown function DUF2498; KEGG: sgl:SG1407 hypothetical protein; hypothetical protein 2839605..2839856 Rahnella sp. Y9602 10213613 YP_004213341.1 CDS Rahaq_2607 NC_015061.1 2839971 2841014 R PFAM: Peptidase S49 domain protein; peptidase S49; KEGG: spe:Spro_2659 periplasmic protease; Peptidase S49 domain protein complement(2839971..2841014) Rahnella sp. Y9602 10213614 YP_004213342.1 CDS Rahaq_2608 NC_015061.1 2841327 2842136 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ypm:YP_2012 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2841327..2842136 Rahnella sp. Y9602 10213615 YP_004213343.1 CDS Rahaq_2609 NC_015061.1 2842155 2842745 D TIGRFAM: cob(I)alamin adenosyltransferase; KEGG: spe:Spro_2661 cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase 2842155..2842745 Rahnella sp. Y9602 10213616 YP_004213344.1 CDS Rahaq_2610 NC_015061.1 2842762 2843805 R TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; KEGG: etr:ETAE_1847 nicotinate-nucleotide--dimethylbenzimidazole; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase complement(2842762..2843805) Rahnella sp. Y9602 10213617 YP_004213345.1 CDS Rahaq_2611 NC_015061.1 2843831 2844427 R KEGG: plu:plu2981 alpha-ribazole-5'-phosphate phosphatase; TIGRFAM: alpha-ribazole phosphatase; PFAM: Phosphoglycerate mutase; alpha-ribazole-5'-phosphate phosphatase complement(2843831..2844427) Rahnella sp. Y9602 10213618 YP_004213346.1 CDS Rahaq_2612 NC_015061.1 2844444 2845196 R KEGG: etr:ETAE_1546 cobalamin synthase; TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; cobalamin 5'-phosphate synthase complement(2844444..2845196) Rahnella sp. Y9602 10213619 YP_004213347.1 CDS Rahaq_2613 NC_015061.1 2845222 2845776 R KEGG: yen:YE2710 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; PFAM: cobalbumin biosynthesis protein; adenosylcobinamide-phosphate guanylyltransferase complement(2845222..2845776) Rahnella sp. Y9602 10213620 YP_004213348.1 CDS Rahaq_2614 NC_015061.1 2845925 2847244 R KEGG: spe:Spro_2662 23S rRNA pseudouridylate synthase B; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; pseudouridine synthase complement(2845925..2847244) Rahnella sp. Y9602 10213621 YP_004213349.1 CDS Rahaq_2615 NC_015061.1 2847443 2848063 R KEGG: ypb:YPTS_2203 hypothetical protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; Sua5/YciO/YrdC/YwlC family protein complement(2847443..2848063) Rahnella sp. Y9602 10213622 YP_004213350.1 CDS Rahaq_2616 NC_015061.1 2848098 2849021 R KEGG: spe:Spro_2666 phosphotransferase domain-containing protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; PHP domain-containing protein complement(2848098..2849021) Rahnella sp. Y9602 10213623 YP_004213351.1 CDS Rahaq_2617 NC_015061.1 2849512 2851074 D KEGG: yen:YE2209 anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; anthranilate synthase component I 2849512..2851074 Rahnella sp. Y9602 10213624 YP_004213352.1 CDS Rahaq_2618 NC_015061.1 2851076 2851654 D KEGG: yen:YE2210 anthranilate synthase component II; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; glutamine amidotransferase of anthranilate synthase 2851076..2851654 Rahnella sp. Y9602 10213625 YP_004213353.1 CDS Rahaq_2619 NC_015061.1 2851666 2852679 D TIGRFAM: anthranilate phosphoribosyltransferase; KEGG: spe:Spro_2669 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; anthranilate phosphoribosyltransferase 2851666..2852679 Rahnella sp. Y9602 10213626 YP_004213354.1 CDS Rahaq_2620 NC_015061.1 2852683 2854047 D KEGG: spe:Spro_2670 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; PFAM: Indole-3-glycerol phosphate synthase; N-(5'phosphoribosyl)anthranilate isomerase (PRAI); Indole-3-glycerol-phosphate synthase., Phosphoribosylanthranilate isomerase 2852683..2854047 Rahnella sp. Y9602 10213627 YP_004213355.1 CDS Rahaq_2621 NC_015061.1 2854092 2855282 D KEGG: spe:Spro_2671 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase, subunit beta; PFAM: Pyridoxal-5'-phosphate-dependent protein subunit beta; tryptophan synthase subunit beta 2854092..2855282 Rahnella sp. Y9602 10213628 YP_004213356.1 CDS Rahaq_2622 NC_015061.1 2855282 2856088 D KEGG: spe:Spro_2672 tryptophan synthase subunit alpha; TIGRFAM: tryptophan synthase, subunit alpha; PFAM: tryptophan synthase alpha chain; TspO and MBR-like proteins 2855282..2856088 Rahnella sp. Y9602 10213629 YP_004213357.1 CDS Rahaq_2623 NC_015061.1 2856304 2856618 D KEGG: spe:Spro_2673 transport-associated; PFAM: transport-associated; SMART: Transport-associated and nodulation region; transport-associated protein 2856304..2856618 Rahnella sp. Y9602 10213630 YP_004213358.1 CDS Rahaq_2624 NC_015061.1 2856689 2857321 R PFAM: OmpW family protein; KEGG: ddd:Dda3937_00570 outer membrane protein W; OmpW family protein complement(2856689..2857321) Rahnella sp. Y9602 10213631 YP_004213359.1 CDS Rahaq_2625 NC_015061.1 2857613 2857990 D PFAM: protein of unknown function UPF0153; KEGG: yen:YE2216A hypothetical protein; hypothetical protein 2857613..2857990 Rahnella sp. Y9602 10213632 YP_004213360.1 CDS Rahaq_2626 NC_015061.1 2858104 2858859 D PFAM: protein of unknown function UPF0259; KEGG: spe:Spro_2675 hypothetical protein; hypothetical protein 2858104..2858859 Rahnella sp. Y9602 10213633 YP_004213361.1 CDS Rahaq_2627 NC_015061.1 2858901 2860223 R PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein; transposase IS4 family protein complement(2858901..2860223) Rahnella sp. Y9602 10213634 YP_004213362.1 CDS Rahaq_2628 NC_015061.1 2860384 2860923 D KEGG: spe:Spro_2677 intracellular septation protein A; TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A; intracellular septation protein A 2860384..2860923 Rahnella sp. Y9602 10213635 YP_004213363.1 CDS Rahaq_2629 NC_015061.1 2860997 2861437 D PFAM: thioesterase superfamily protein; KEGG: spe:Spro_2678 acyl-CoA thioester hydrolase; thioesterase superfamily protein 2860997..2861437 Rahnella sp. Y9602 10213636 YP_004213364.1 CDS Rahaq_2630 NC_015061.1 2861539 2862270 R KEGG: spe:Spro_2682 transport protein TonB; TIGRFAM: TonB family protein; PFAM: TonB domain; TonB family protein complement(2861539..2862270) Rahnella sp. Y9602 10213637 YP_004213365.1 CDS Rahaq_2631 NC_015061.1 2862484 2862780 D PFAM: YCII-related; KEGG: ecw:EcE24377A_1399 YciI-like protein; hypothetical protein 2862484..2862780 Rahnella sp. Y9602 10213638 YP_004213366.1 CDS Rahaq_2632 NC_015061.1 2862944 2863234 D KEGG: gem:GM21_2278 hypothetical protein; hypothetical protein 2862944..2863234 Rahnella sp. Y9602 10213639 YP_004213367.1 CDS Rahaq_2633 NC_015061.1 2863351 2863512 D KEGG: ypb:YPTS_2464 hypothetical protein; hypothetical protein 2863351..2863512 Rahnella sp. Y9602 10213640 YP_004213368.1 CDS Rahaq_2634 NC_015061.1 2863993 2865453 D KEGG: yen:YE2227 cardiolipin synthetase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; phospholipase D/Transphosphatidylase 2863993..2865453 Rahnella sp. Y9602 10213641 YP_004213369.1 CDS Rahaq_2635 NC_015061.1 2865534 2865857 D PFAM: protein of unknown function DUF440; KEGG: spe:Spro_2690 dsDNA-mimic protein; hypothetical protein 2865534..2865857 Rahnella sp. Y9602 10213642 YP_004213370.1 CDS Rahaq_2636 NC_015061.1 2865993 2867030 R TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: yen:YE2229 oligopeptide transport ATP-binding protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(2865993..2867030) Rahnella sp. Y9602 10213643 YP_004213371.1 CDS Rahaq_2637 NC_015061.1 2867027 2868052 R TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: spe:Spro_2698 oligopeptide transporter ATP-binding component; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(2867027..2868052) Rahnella sp. Y9602 10213644 YP_004213372.1 CDS Rahaq_2638 NC_015061.1 2868064 2868972 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kva:Kvar_1987 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(2868064..2868972) Rahnella sp. Y9602 10213645 YP_004213373.1 CDS Rahaq_2639 NC_015061.1 2868988 2869908 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypb:YPTS_2174 oligopeptide transporter permease; binding-protein-dependent transport system inner membrane protein complement(2868988..2869908) Rahnella sp. Y9602 10213646 YP_004213374.1 CDS Rahaq_2640 NC_015061.1 2870096 2871736 R PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE2233 periplasmic oligopeptide-binding protein precursor; family 5 extracellular solute-binding protein complement(2870096..2871736) Rahnella sp. Y9602 10213647 YP_004213375.1 CDS Rahaq_2641 NC_015061.1 2872911 2873555 R PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: etr:ETAE_1511 multiple antibiotic transporter; multiple antibiotic resistance (MarC)-like protein complement(2872911..2873555) Rahnella sp. Y9602 10213648 YP_004213376.1 CDS Rahaq_2642 NC_015061.1 2874091 2876760 D PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: yen:YE2238 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; iron-containing alcohol dehydrogenase 2874091..2876760 Rahnella sp. Y9602 10213649 YP_004213377.1 CDS Rahaq_2643 NC_015061.1 2876873 2877481 R KEGG: pwa:Pecwa_2283 thymidine kinase; PFAM: thymidine kinase; thymidine kinase complement(2876873..2877481) Rahnella sp. Y9602 10213650 YP_004213378.1 CDS Rahaq_2644 NC_015061.1 2878105 2878512 D KEGG: spe:Spro_2706 global DNA-binding transcriptional dual regulator H-NS; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS 2878105..2878512 Rahnella sp. Y9602 10213651 YP_004213379.1 CDS Rahaq_2645 NC_015061.1 2878713 2879720 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: ebi:EbC_24040 UDP-sugar epimerase; NAD-dependent epimerase/dehydratase complement(2878713..2879720) Rahnella sp. Y9602 10213652 YP_004213380.1 CDS Rahaq_2646 NC_015061.1 2879730 2881073 R TIGRFAM: nucleotide sugar dehydrogenase; KEGG: spe:Spro_2708 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase complement(2879730..2881073) Rahnella sp. Y9602 10213653 YP_004213381.1 CDS Rahaq_2647 NC_015061.1 2881289 2882302 R KEGG: spe:Spro_2710 response regulator of RpoS; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein complement(2881289..2882302) Rahnella sp. Y9602 10213654 YP_004213382.1 CDS Rahaq_2648 NC_015061.1 2882399 2883310 R PFAM: Patatin; KEGG: spe:Spro_2711 hypothetical protein; patatin complement(2882399..2883310) Rahnella sp. Y9602 10213655 YP_004213383.1 CDS Rahaq_2649 NC_015061.1 2883459 2883923 D PFAM: SEC-C motif domain protein; KEGG: ypb:YPTS_2164 hypothetical protein; SEC-C motif domain-containing protein 2883459..2883923 Rahnella sp. Y9602 10213656 YP_004213384.1 CDS Rahaq_2650 NC_015061.1 2883967 2884815 D KEGG: spe:Spro_2713 formyltetrahydrofolate deformylase; TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein; formyltetrahydrofolate deformylase 2883967..2884815 Rahnella sp. Y9602 10213657 YP_004213385.1 CDS Rahaq_2651 NC_015061.1 2885343 2887175 R KEGG: atu:Atu4723 ABC transporter nucleotide binding/ATPase protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter complement(2885343..2887175) Rahnella sp. Y9602 10213659 YP_004213386.1 CDS Rahaq_2652 NC_015061.1 2887177 2888610 R PFAM: Microcystin LR degradation protein MlrC-like; MlrC domain protein; KEGG: rlg:Rleg_4101 microcystin LR degradation protein MlrC-like protein; microcystin LR degradation protein MlrC-like protein complement(2887177..2888610) Rahnella sp. Y9602 10213660 YP_004213387.1 CDS Rahaq_2653 NC_015061.1 2888623 2889762 R PFAM: ROK family protein; KEGG: ara:Arad_8668 transcriptional regulator protein; ROK family protein complement(2888623..2889762) Rahnella sp. Y9602 10213661 YP_004213388.1 CDS Rahaq_2654 NC_015061.1 2889998 2891542 D PFAM: extracellular solute-binding protein family 5; KEGG: rfr:Rfer_3103 extracellular solute-binding protein; family 5 extracellular solute-binding protein 2889998..2891542 Rahnella sp. Y9602 10213662 YP_004213389.1 CDS Rahaq_2655 NC_015061.1 2891570 2892490 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: enc:ECL_02888 peptide/nickel transport system permease protein; binding-protein-dependent transport system inner membrane protein 2891570..2892490 Rahnella sp. Y9602 10213663 YP_004213390.1 CDS Rahaq_2656 NC_015061.1 2892490 2893356 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH0030 oligopeptide ABC transporter (permease); binding-protein-dependent transport system inner membrane protein 2892490..2893356 Rahnella sp. Y9602 10213664 YP_004213391.1 CDS Rahaq_2657 NC_015061.1 2893353 2894282 D PFAM: ROK family protein; KEGG: oan:Oant_3487 ROK family protein; ROK family protein 2893353..2894282 Rahnella sp. Y9602 10213665 YP_004213392.1 CDS Rahaq_2658 NC_015061.1 2894457 2895026 R PFAM: GCN5-related N-acetyltransferase; KEGG: dac:Daci_2652 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(2894457..2895026) Rahnella sp. Y9602 10213666 YP_004213393.1 CDS Rahaq_2659 NC_015061.1 2895129 2895968 D KEGG: kva:Kvar_2401 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase; diaminopimelate epimerase 2895129..2895968 Rahnella sp. Y9602 10213667 YP_004213394.1 CDS Rahaq_2660 NC_015061.1 2896291 2897670 D PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2097 major facilitator transporter; major facilitator superfamily protein 2896291..2897670 Rahnella sp. Y9602 10213668 YP_004213395.1 CDS Rahaq_2661 NC_015061.1 2897776 2899038 D PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; Extradiol ring-cleavage dioxygenase LigAB LigA subunit; KEGG: spe:Spro_2096 protocatechuate 4,5-dioxygenase; extradiol ring-cleavage dioxygenase class III protein subunit B 2897776..2899038 Rahnella sp. Y9602 10213669 YP_004213396.1 CDS Rahaq_2662 NC_015061.1 2899035 2899868 D PFAM: amidohydrolase 2; KEGG: eay:EAM_1903 amidohydrolase; amidohydrolase 2899035..2899868 Rahnella sp. Y9602 10213670 YP_004213397.1 CDS Rahaq_2663 NC_015061.1 2899885 2900325 D TIGRFAM: 3-dehydroquinate dehydratase, type II; KEGG: spe:Spro_2094 3-dehydroquinate dehydratase, type II; PFAM: dehydroquinase class II; 3-dehydroquinate dehydratase 2899885..2900325 Rahnella sp. Y9602 10213671 YP_004213398.1 CDS Rahaq_2664 NC_015061.1 2900397 2901650 R KEGG: ebi:EbC_pEb10200130 lipid A core, surface polymer ligase WaaL; hypothetical protein complement(2900397..2901650) Rahnella sp. Y9602 10213672 YP_004213399.1 CDS Rahaq_2665 NC_015061.1 2901643 2902755 R PFAM: glycosyl transferase group 1; KEGG: ecg:E2348C_3876 UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransfe rase; group 1 glycosyl transferase complement(2901643..2902755) Rahnella sp. Y9602 10213673 YP_004213400.1 CDS Rahaq_2666 NC_015061.1 2903117 2904346 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2093 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2903117..2904346) Rahnella sp. Y9602 10213674 YP_004213401.1 CDS Rahaq_2667 NC_015061.1 2904498 2905244 D PFAM: LmbE family protein; KEGG: spe:Spro_2092 LmbE family protein; LmbE family protein 2904498..2905244 Rahnella sp. Y9602 10213675 YP_004213402.1 CDS Rahaq_2668 NC_015061.1 2905241 2905966 D KEGG: spe:Spro_2091 hypothetical protein; TIGRFAM: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; PFAM: Dimethylmenaquinone methyltransferase; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase 2905241..2905966 Rahnella sp. Y9602 10213676 YP_004213403.1 CDS Rahaq_2669 NC_015061.1 2905976 2907100 D PFAM: protein of unknown function DUF453; KEGG: kpu:KP1_5416 hypothetical protein; hypothetical protein 2905976..2907100 Rahnella sp. Y9602 10213677 YP_004213404.1 CDS Rahaq_2670 NC_015061.1 2907093 2907977 D PFAM: Phosphogluconate dehydrogenase, NAD-binding, -like; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: ebi:EbC_05330 phosphogluconate dehydrogenase, NAD-binding; Phosphogluconate dehydrogenase, NAD-binding, -like protein 2907093..2907977 Rahnella sp. Y9602 10213678 YP_004213405.1 CDS Rahaq_2671 NC_015061.1 2908302 2909258 R TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: spe:Spro_2351 oligopeptide/dipeptide ABC transporter ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(2908302..2909258) Rahnella sp. Y9602 10213679 YP_004213406.1 CDS Rahaq_2672 NC_015061.1 2909258 2910286 R TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: spe:Spro_2350 oligopeptide/dipeptide ABC transporter ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(2909258..2910286) Rahnella sp. Y9602 10213680 YP_004213407.1 CDS Rahaq_2673 NC_015061.1 2910288 2911199 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2349 ATP-dependent peptide transporter membrane subunit; binding-protein-dependent transport system inner membrane protein complement(2910288..2911199) Rahnella sp. Y9602 10213681 YP_004213408.1 CDS Rahaq_2674 NC_015061.1 2911204 2912307 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2348 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(2911204..2912307) Rahnella sp. Y9602 10213682 YP_004213409.1 CDS Rahaq_2675 NC_015061.1 2912282 2913862 R PFAM: extracellular solute-binding protein family 5; KEGG: spe:Spro_2347 extracellular solute-binding protein; family 5 extracellular solute-binding protein complement(2912282..2913862) Rahnella sp. Y9602 10213683 YP_004213410.1 CDS Rahaq_2676 NC_015061.1 2913910 2914491 R PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; KEGG: spe:Spro_2346 D-alanyl-D-alanine dipeptidase; peptidase M15D vanX D-ala-D-ala dipeptidase complement(2913910..2914491) Rahnella sp. Y9602 10213684 YP_004213411.1 CDS Rahaq_2677 NC_015061.1 2914520 2915392 R KEGG: spe:Spro_2345 RpiR family transcriptional regulator; RpiR family transcriptional regulator complement(2914520..2915392) Rahnella sp. Y9602 10213685 YP_004213412.1 CDS Rahaq_2679 NC_015061.1 2916124 2917782 R KEGG: spe:Spro_2521 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; alpha amylase complement(2916124..2917782) Rahnella sp. Y9602 10213688 YP_004213413.1 CDS Rahaq_2680 NC_015061.1 2917782 2919437 R KEGG: esa:ESA_02710 hypothetical protein; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; alpha amylase complement(2917782..2919437) Rahnella sp. Y9602 10213689 YP_004213414.1 CDS Rahaq_2681 NC_015061.1 2919460 2920569 R KEGG: spe:Spro_2522 ABC transporter-related protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter complement(2919460..2920569) Rahnella sp. Y9602 10213690 YP_004213415.1 CDS Rahaq_2682 NC_015061.1 2920632 2921993 R PFAM: glycoside hydrolase family 4; KEGG: spe:Spro_2523 glycoside hydrolase family protein; glycoside hydrolase complement(2920632..2921993) Rahnella sp. Y9602 10213691 YP_004213416.1 CDS Rahaq_2683 NC_015061.1 2922029 2922874 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2524 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(2922029..2922874) Rahnella sp. Y9602 10213692 YP_004213417.1 CDS Rahaq_2684 NC_015061.1 2922877 2923857 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2525 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(2922877..2923857) Rahnella sp. Y9602 10213693 YP_004213418.1 CDS Rahaq_2685 NC_015061.1 2923894 2925159 R PFAM: extracellular solute-binding protein family 1; KEGG: spe:Spro_2526 extracellular solute-binding protein; extracellular solute-binding protein complement(2923894..2925159) Rahnella sp. Y9602 10213694 YP_004213419.1 CDS Rahaq_2686 NC_015061.1 2925282 2926217 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2527 LysR family transcriptional regulator; LysR family transcriptional regulator 2925282..2926217 Rahnella sp. Y9602 10213695 YP_004213420.1 CDS Rahaq_2687 NC_015061.1 2926218 2926484 R KEGG: car:cauri_2289 PTS system, glucose-specific IIABC component; PTS system glucose-specific transporter subunit IIABC complement(2926218..2926484) Rahnella sp. Y9602 10213696 YP_004213421.1 CDS Rahaq_2688 NC_015061.1 2926747 2927697 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: esa:ESA_03964 hypothetical protein; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(2926747..2927697) Rahnella sp. Y9602 10213697 YP_004213422.1 CDS Rahaq_2689 NC_015061.1 2927707 2929023 R PFAM: major facilitator superfamily MFS_1; KEGG: esa:ESA_03965 hypothetical protein; major facilitator superfamily protein complement(2927707..2929023) Rahnella sp. Y9602 10213698 YP_004213423.1 CDS Rahaq_2690 NC_015061.1 2929186 2930334 R PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pwa:Pecwa_0025 galactonate dehydratase; mandelate racemase/muconate lactonizing protein complement(2929186..2930334) Rahnella sp. Y9602 10213699 YP_004213424.1 CDS Rahaq_2691 NC_015061.1 2930331 2930948 R PFAM: KDPG and KHG aldolase; KEGG: spe:Spro_0043 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; KDPG and KHG aldolase complement(2930331..2930948) Rahnella sp. Y9602 10213700 YP_004213425.1 CDS Rahaq_2692 NC_015061.1 2930932 2931828 R KEGG: pwa:Pecwa_0023 2-dehydro-3-deoxygalactonokinase; PFAM: 2-keto-3-deoxy-galactonokinase; 2-dehydro-3-deoxygalactonokinase complement(2930932..2931828) Rahnella sp. Y9602 10213701 YP_004213426.1 CDS Rahaq_2693 NC_015061.1 2931825 2932523 R KEGG: pwa:Pecwa_0022 GntR domain protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(2931825..2932523) Rahnella sp. Y9602 10213702 YP_004213427.1 CDS Rahaq_2695 NC_015061.1 2933187 2933624 D PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_3499 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2933187..2933624 Rahnella sp. Y9602 10213704 YP_004213428.1 CDS Rahaq_2696 NC_015061.1 2933995 2935233 D PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ent:Ent638_1530 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 2933995..2935233 Rahnella sp. Y9602 10213705 YP_004213429.1 CDS Rahaq_2697 NC_015061.1 2935371 2936120 R KEGG: enc:ECL_03132 hypothetical protein; hypothetical protein complement(2935371..2936120) Rahnella sp. Y9602 10213706 YP_004213430.1 CDS Rahaq_2699 NC_015061.1 2937013 2937630 R PFAM: lysine exporter protein (LYSE/YGGA); KEGG: ddd:Dda3937_01179 threonine efflux protein; lysine exporter protein LysE/YggA complement(2937013..2937630) Rahnella sp. Y9602 10213708 YP_004213431.1 CDS Rahaq_2700 NC_015061.1 2937902 2938909 R KEGG: ebi:EbC_44350 conserved uncharacterized protein; hypothetical protein complement(2937902..2938909) Rahnella sp. Y9602 10213709 YP_004213432.1 CDS Rahaq_2701 NC_015061.1 2939339 2939608 D KEGG: kpu:KP1_2833 hypothetical protein; hypothetical protein 2939339..2939608 Rahnella sp. Y9602 10213710 YP_004213433.1 CDS Rahaq_2702 NC_015061.1 2939875 2940225 D KEGG: ecz:ECS88_2192 conserved hypothetical protein from phage origin; membrane protein; hypothetical protein 2939875..2940225 Rahnella sp. Y9602 10213711 YP_004213434.1 CDS Rahaq_2703 NC_015061.1 2940436 2941497 D KEGG: epy:EpC_04550 conserved uncharacterized protein; hypothetical protein 2940436..2941497 Rahnella sp. Y9602 10213712 YP_004213435.1 CDS Rahaq_2704 NC_015061.1 2941783 2942523 R KEGG: stt:t0349 hypothetical protein; hypothetical protein complement(2941783..2942523) Rahnella sp. Y9602 10213713 YP_004213436.1 CDS Rahaq_2705 NC_015061.1 2942876 2943664 R KEGG: dac:Daci_4287 N-acetyltransferase; PFAM: N-acetyltransferase; arylamine N-acetyltransferase complement(2942876..2943664) Rahnella sp. Y9602 10213714 YP_004213437.1 CDS Rahaq_2706 NC_015061.1 2943763 2945199 D manually curated; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: dac:Daci_4286 transcriptional regulator; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 2943763..2945199 Rahnella sp. Y9602 10213715 YP_004213438.1 CDS Rahaq_2707 NC_015061.1 2945303 2946223 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: ebi:EbC_37500 hypothetical protein; hypothetical protein complement(2945303..2946223) Rahnella sp. Y9602 10213716 YP_004213439.1 CDS Rahaq_2708 NC_015061.1 2946460 2947302 D KEGG: ebi:EbC_37490 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 2946460..2947302 Rahnella sp. Y9602 10213717 YP_004213440.1 CDS Rahaq_2709 NC_015061.1 2947306 2948016 D KEGG: ebi:EbC_37480 allophanate hydrolase subunit 1; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; allophanate hydrolase subunit 1 2947306..2948016 Rahnella sp. Y9602 10213718 YP_004213441.1 CDS Rahaq_2710 NC_015061.1 2948013 2949014 D SMART: Allophanate hydrolase subunit 2; TIGRFAM: urea amidolyase related protein; KEGG: ebi:EbC_37470 allophanate hydrolase subunit 2; PFAM: Allophanate hydrolase subunit 2; urea amidolyase 2948013..2949014 Rahnella sp. Y9602 10213719 YP_004213442.1 CDS Rahaq_2711 NC_015061.1 2949083 2950288 R PFAM: aminotransferase class I and II; KEGG: ebi:EbC_37460 aspartate aminotransferase A; class I and II aminotransferase complement(2949083..2950288) Rahnella sp. Y9602 10213720 YP_004213443.1 CDS Rahaq_2712 NC_015061.1 2950658 2951581 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebi:EbC_37450 transcriptional regulator, LysR family; LysR family transcriptional regulator 2950658..2951581 Rahnella sp. Y9602 10213721 YP_004213444.1 CDS Rahaq_2713 NC_015061.1 2951722 2952162 D PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: ebi:EbC_37440 hypothetical protein; biotin/lipoyl attachment domain-containing protein 2951722..2952162 Rahnella sp. Y9602 10213722 YP_004213445.1 CDS Rahaq_2714 NC_015061.1 2952159 2952941 D PFAM: LamB/YcsF family protein; KEGG: ebi:EbC_37430 LamB/YcsF family protein; LamB/YcsF family protein 2952159..2952941 Rahnella sp. Y9602 10213723 YP_004213446.1 CDS Rahaq_2715 NC_015061.1 2953075 2953824 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebi:EbC_37420 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2953075..2953824 Rahnella sp. Y9602 10213724 YP_004213447.1 CDS Rahaq_2716 NC_015061.1 2953875 2954570 D KEGG: ebi:EbC_37410 polar amino acid ABC transporter permease protein; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 2953875..2954570 Rahnella sp. Y9602 10213725 YP_004213448.1 CDS Rahaq_2717 NC_015061.1 2954575 2955324 D KEGG: ebi:EbC_37400 polar amino acid ABC transporter permease protein; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 2954575..2955324 Rahnella sp. Y9602 10213726 YP_004213449.1 CDS Rahaq_2718 NC_015061.1 2955337 2956074 D KEGG: ebi:EbC_37390 polar amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2955337..2956074 Rahnella sp. Y9602 10213727 YP_004213450.1 CDS Rahaq_2719 NC_015061.1 2956184 2956537 R KEGG: eca:ECA1595 hypothetical protein; hypothetical protein complement(2956184..2956537) Rahnella sp. Y9602 10213728 YP_004213451.1 CDS Rahaq_2720 NC_015061.1 2956494 2956661 R hypothetical protein complement(2956494..2956661) Rahnella sp. Y9602 10213729 YP_004213452.1 CDS Rahaq_2721 NC_015061.1 2956775 2957644 R KEGG: pst:PSPTO_3020 hypothetical protein; hypothetical protein complement(2956775..2957644) Rahnella sp. Y9602 10213730 YP_004213453.1 CDS Rahaq_2723 NC_015061.1 2957991 2958866 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pfs:PFLU3381 LysR-family transcriptional regulator; LysR family transcriptional regulator 2957991..2958866 Rahnella sp. Y9602 10213732 YP_004213454.1 CDS Rahaq_2724 NC_015061.1 2959090 2960403 D PFAM: FAD dependent oxidoreductase; KEGG: pct:PC1_4199 FAD dependent oxidoreductase; FAD dependent oxidoreductase 2959090..2960403 Rahnella sp. Y9602 10213733 YP_004213455.1 CDS Rahaq_2725 NC_015061.1 2960440 2961096 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rlt:Rleg2_6509 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(2960440..2961096) Rahnella sp. Y9602 10213734 YP_004213456.1 CDS Rahaq_2726 NC_015061.1 2961077 2962231 R KEGG: ara:Arad_3603 amino acid ABC transporter; PFAM: ABC transporter related; NIL domain; SMART: AAA ATPase; ABC transporter complement(2961077..2962231) Rahnella sp. Y9602 10213735 YP_004213457.1 CDS Rahaq_2727 NC_015061.1 2962243 2963085 R KEGG: mlo:mll4794 outer membrane lipoprotein; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; lipoprotein complement(2962243..2963085) Rahnella sp. Y9602 10213736 YP_004213458.1 CDS Rahaq_2728 NC_015061.1 2963336 2965642 R KEGG: spe:Spro_3126 phosphoglycerol transferase I; PFAM: sulfatase; Phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase complement(2963336..2965642) Rahnella sp. Y9602 10213737 YP_004213459.1 CDS Rahaq_2729 NC_015061.1 2966062 2966778 R KEGG: ent:Ent638_2495 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(2966062..2966778) Rahnella sp. Y9602 10213738 YP_004213460.1 CDS Rahaq_2730 NC_015061.1 2966775 2967668 R KEGG: ent:Ent638_2494 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(2966775..2967668) Rahnella sp. Y9602 10213739 YP_004213461.1 CDS Rahaq_2731 NC_015061.1 2967665 2968954 R PFAM: inner-membrane translocator; KEGG: ent:Ent638_2493 inner-membrane translocator; inner-membrane translocator complement(2967665..2968954) Rahnella sp. Y9602 10213740 YP_004213462.1 CDS Rahaq_2732 NC_015061.1 2968965 2969879 R PFAM: inner-membrane translocator; KEGG: ent:Ent638_2492 inner-membrane translocator; inner-membrane translocator complement(2968965..2969879) Rahnella sp. Y9602 10213741 YP_004213463.1 CDS Rahaq_2733 NC_015061.1 2970069 2971196 R PFAM: Extracellular ligand-binding receptor; KEGG: enc:ECL_01382 branched-chain amino acid transport system substrate-binding protein; extracellular ligand-binding receptor complement(2970069..2971196) Rahnella sp. Y9602 10213742 YP_004213464.1 CDS Rahaq_2734 NC_015061.1 2971609 2971824 D PFAM: protein of unknown function DUF903; KEGG: set:SEN1470 lipoprotein; hypothetical protein 2971609..2971824 Rahnella sp. Y9602 10213743 YP_004213465.1 CDS Rahaq_2735 NC_015061.1 2971951 2973780 R KEGG: ebi:EbC_44400 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer complement(2971951..2973780) Rahnella sp. Y9602 10213744 YP_004213466.1 CDS Rahaq_2736 NC_015061.1 2974123 2975097 R KEGG: ppg:PputGB1_2870 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase; porphobilinogen synthase complement(2974123..2975097) Rahnella sp. Y9602 10213745 YP_004213467.1 CDS Rahaq_2737 NC_015061.1 2975313 2977412 R KEGG: ypb:YPTS_0093 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; peptidase C39 bacteriocin processing; SMART: AAA ATPase; ABC transporter complement(2975313..2977412) Rahnella sp. Y9602 10213746 YP_004213468.1 CDS Rahaq_2738 NC_015061.1 2977399 2978685 R PFAM: secretion protein HlyD family protein; KEGG: ypb:YPTS_0094 secretion protein HlyD family protein; secretion protein HlyD family protein complement(2977399..2978685) Rahnella sp. Y9602 10213747 YP_004213469.1 CDS Rahaq_2739 NC_015061.1 2979112 2979303 D KEGG: sbl:Sbal_2364 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2979112..2979303 Rahnella sp. Y9602 10213748 YP_004213470.1 CDS Rahaq_2740 NC_015061.1 2979549 2982059 D KEGG: esa:ESA_01215 hypothetical protein; TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; PFAM: Protein of unknown function DUF2345; Rhs element Vgr protein 2979549..2982059 Rahnella sp. Y9602 10213749 YP_004213471.1 CDS Rahaq_2741 NC_015061.1 2982056 2983318 D PFAM: VRR-NUC domain-containing protein; KEGG: ses:SARI_00051 hypothetical protein; VRR-NUC domain-containing protein 2982056..2983318 Rahnella sp. Y9602 10213750 YP_004213472.1 CDS Rahaq_2742 NC_015061.1 2983332 2984534 D KEGG: ses:SARI_00052 hypothetical protein; hypothetical protein 2983332..2984534 Rahnella sp. Y9602 10213751 YP_004213473.1 CDS Rahaq_2743 NC_015061.1 2984623 2985453 D KEGG: ent:Ent638_2907 hypothetical protein; hypothetical protein 2984623..2985453 Rahnella sp. Y9602 10213752 YP_004213474.1 CDS Rahaq_2744 NC_015061.1 2985534 2986601 R PFAM: Uncharacterised protein family UPF0283; KEGG: spe:Spro_2618 hypothetical protein; hypothetical protein complement(2985534..2986601) Rahnella sp. Y9602 10213753 YP_004213475.1 CDS Rahaq_2745 NC_015061.1 2986598 2987995 R PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: spe:Spro_2619 hypothetical protein; hypothetical protein complement(2986598..2987995) Rahnella sp. Y9602 10213754 YP_004213476.1 CDS Rahaq_2746 NC_015061.1 2987976 2988221 R PFAM: shock protein PspD; KEGG: spe:Spro_2621 peripheral inner membrane phage-shock protein; shock protein PspD complement(2987976..2988221) Rahnella sp. Y9602 10213755 YP_004213477.1 CDS Rahaq_2747 NC_015061.1 2988306 2988665 R KEGG: yen:YE2119 DNA-binding transcriptional activator PspC; TIGRFAM: phage shock protein C; PFAM: PspC domain protein; phage shock protein C, PspC complement(2988306..2988665) Rahnella sp. Y9602 10213756 YP_004213478.1 CDS Rahaq_2748 NC_015061.1 2988665 2988892 R KEGG: yen:YE2120 phage shock protein B; TIGRFAM: phage shock protein B; PFAM: shock B family protein; phage shock protein B complement(2988665..2988892) Rahnella sp. Y9602 10213757 YP_004213479.1 CDS Rahaq_2749 NC_015061.1 2988982 2989653 R KEGG: spe:Spro_2624 phage shock protein PspA; TIGRFAM: phage shock protein A; PFAM: PspA/IM30 family protein; phage shock protein A, PspA complement(2988982..2989653) Rahnella sp. Y9602 10213758 YP_004213480.1 CDS Rahaq_2750 NC_015061.1 2989886 2990893 D TIGRFAM: psp operon transcriptional activator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; KEGG: spe:Spro_2625 phage shock protein operon transcriptional activator; SMART: AAA ATPase; Fis family transcriptional regulator 2989886..2990893 Rahnella sp. Y9602 10213759 YP_004213481.1 CDS Rahaq_2751 NC_015061.1 2991114 2992301 R PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: spe:Spro_2626 cobalamin synthesis protein P47K; cobalamin synthesis protein P47K complement(2991114..2992301) Rahnella sp. Y9602 10213760 YP_004213482.1 CDS Rahaq_2752 NC_015061.1 2992541 2994223 D PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE2125 peptide transport periplasmic protein precursor; family 5 extracellular solute-binding protein 2992541..2994223 Rahnella sp. Y9602 10213761 YP_004213483.1 CDS Rahaq_2753 NC_015061.1 2994220 2995185 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE2126 peptide transport system permease protein; binding-protein-dependent transport system inner membrane protein 2994220..2995185 Rahnella sp. Y9602 10213762 YP_004213484.1 CDS Rahaq_2754 NC_015061.1 2995172 2996062 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2631 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2995172..2996062 Rahnella sp. Y9602 10213763 YP_004213485.1 CDS Rahaq_2755 NC_015061.1 2996062 2997054 D TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: spe:Spro_2632 oligopeptide/dipeptide ABC transporter ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2996062..2997054 Rahnella sp. Y9602 10213764 YP_004213486.1 CDS Rahaq_2756 NC_015061.1 2997054 2997863 D KEGG: spe:Spro_2633 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2997054..2997863 Rahnella sp. Y9602 10213765 YP_004213487.1 CDS Rahaq_2757 NC_015061.1 2998071 2999273 D KEGG: spe:Spro_2634 uncharacterized peroxidase-related enzyme; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; peroxidase-like protein 2998071..2999273 Rahnella sp. Y9602 10213766 YP_004213488.1 CDS Rahaq_2758 NC_015061.1 2999856 3001367 D KEGG: spe:Spro_2233 tripeptide transporter permease; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; amino acid/peptide transporter 2999856..3001367 Rahnella sp. Y9602 10213767 YP_004213489.1 CDS Rahaq_2759 NC_015061.1 3001498 3002052 D PFAM: transferase hexapeptide repeat containing protein; KEGG: etr:ETAE_1299 hypothetical protein; transferase hexapeptide repeat containing protein 3001498..3002052 Rahnella sp. Y9602 10213768 YP_004213490.1 CDS Rahaq_2760 NC_015061.1 3002160 3004055 R TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; KEGG: spe:Spro_2420 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAC repeat-containing protein; GAF domain protein; PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase complement(3002160..3004055) Rahnella sp. Y9602 10213769 YP_004213491.1 CDS Rahaq_2761 NC_015061.1 3004220 3005251 R KEGG: vap:Vapar_6347 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(3004220..3005251) Rahnella sp. Y9602 10213770 YP_004213492.1 CDS Rahaq_2762 NC_015061.1 3005559 3005828 D KEGG: spe:Spro_1004 hypothetical protein; hypothetical protein 3005559..3005828 Rahnella sp. Y9602 10213771 YP_004213493.1 CDS Rahaq_2763 NC_015061.1 3006387 3008060 D TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: ebi:EbC_26110 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 3006387..3008060 Rahnella sp. Y9602 10213772 YP_004213494.1 CDS Rahaq_2764 NC_015061.1 3008185 3009051 D KEGG: spe:Spro_2222 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; dihydrodipicolinate synthase 3008185..3009051 Rahnella sp. Y9602 10213773 YP_004213495.1 CDS Rahaq_2765 NC_015061.1 3009225 3009830 D PFAM: Glutathione S-transferase domain; KEGG: spe:Spro_2221 glutathionine S-transferase; glutathione S-transferase 3009225..3009830 Rahnella sp. Y9602 10213774 YP_004213496.1 CDS Rahaq_2766 NC_015061.1 3009923 3010783 R TIGRFAM: pyridoxal kinase; KEGG: spe:Spro_2220 pyridoxamine kinase; PFAM: PfkB domain protein; pyridoxal kinase complement(3009923..3010783) Rahnella sp. Y9602 10213775 YP_004213497.1 CDS Rahaq_2767 NC_015061.1 3010887 3012161 R SMART: RNA-binding S4 domain protein; TIGRFAM: tyrosyl-tRNA synthetase; KEGG: spe:Spro_2219 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; tyrosyl-tRNA synthetase complement(3010887..3012161) Rahnella sp. Y9602 10213776 YP_004213498.1 CDS Rahaq_2768 NC_015061.1 3012324 3012989 R TIGRFAM: pyridoxamine 5'-phosphate oxidase; KEGG: spe:Spro_2218 pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; Pyridoxine 5'-phosphate oxidase, dimerisation-like; pyridoxamine 5'-phosphate oxidase complement(3012324..3012989) Rahnella sp. Y9602 10213777 YP_004213499.1 CDS Rahaq_2769 NC_015061.1 3013117 3013428 R PFAM: Protein of unknown function DUF2091, periplasmic; KEGG: pwa:Pecwa_2663 hypothetical protein; hypothetical protein complement(3013117..3013428) Rahnella sp. Y9602 10213778 YP_004213500.1 CDS Rahaq_2770 NC_015061.1 3013513 3014640 R PFAM: protein of unknown function UPF0075; KEGG: spe:Spro_2216 anhydro-N-acetylmuramic acid kinase; hypothetical protein complement(3013513..3014640) Rahnella sp. Y9602 10213779 YP_004213501.1 CDS Rahaq_2771 NC_015061.1 3015029 3015499 D KEGG: eay:EAM_1678 outer membrane lipoprotein; outer membrane lipoprotein 3015029..3015499 Rahnella sp. Y9602 10213780 YP_004213502.1 CDS Rahaq_2772 NC_015061.1 3015612 3016046 R KEGG: ent:Ent638_1805 transcriptional regulator SlyA; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR complement(3015612..3016046) Rahnella sp. Y9602 10213781 YP_004213503.1 CDS Rahaq_2773 NC_015061.1 3016154 3016465 D PFAM: protein of unknown function DUF1656; KEGG: spe:Spro_2213 hypothetical protein; hypothetical protein 3016154..3016465 Rahnella sp. Y9602 10213782 YP_004213504.1 CDS Rahaq_2774 NC_015061.1 3016467 3017324 D PFAM: secretion protein HlyD family protein; KEGG: spe:Spro_2212 secretion protein HlyD family protein; secretion protein HlyD family protein 3016467..3017324 Rahnella sp. Y9602 10213783 YP_004213505.1 CDS Rahaq_2775 NC_015061.1 3017334 3019385 D PFAM: Fusaric acid resistance protein conserved region; KEGG: spe:Spro_2211 fusaric acid resistance protein region; fusaric acid resistance protein 3017334..3019385 Rahnella sp. Y9602 10213784 YP_004213506.1 CDS Rahaq_2776 NC_015061.1 3019391 3020287 R PFAM: aldo/keto reductase; KEGG: yen:YE2148 aldo/keto reductase; aldo/keto reductase complement(3019391..3020287) Rahnella sp. Y9602 10213785 YP_004213507.1 CDS Rahaq_2777 NC_015061.1 3020417 3020656 R PFAM: protein of unknown function DUF1289; KEGG: spe:Spro_2207 hypothetical protein; hypothetical protein complement(3020417..3020656) Rahnella sp. Y9602 10213786 YP_004213508.1 CDS Rahaq_2778 NC_015061.1 3021069 3022160 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: spe:Spro_2202 N-ethylmaleimide reductase; NADH:flavin oxidoreductase 3021069..3022160 Rahnella sp. Y9602 10213787 YP_004213509.1 CDS Rahaq_2779 NC_015061.1 3022322 3022729 D TIGRFAM: lactoylglutathione lyase; KEGG: spe:Spro_2200 lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; lactoylglutathione lyase 3022322..3022729 Rahnella sp. Y9602 10213788 YP_004213510.1 CDS Rahaq_2780 NC_015061.1 3022822 3023538 D TIGRFAM: ribonuclease T; PFAM: Exonuclease RNase T and DNA polymerase III; KEGG: spe:Spro_2199 ribonuclease T; SMART: Exonuclease; ribonuclease T 3022822..3023538 Rahnella sp. Y9602 10213789 YP_004213511.1 CDS Rahaq_2781 NC_015061.1 3023614 3023973 R KEGG: pwa:Pecwa_2670 hypothetical protein; TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; glutaredoxin-like protein complement(3023614..3023973) Rahnella sp. Y9602 10213790 YP_004213512.1 CDS Rahaq_2782 NC_015061.1 3024436 3025335 D PFAM: NLP/P60 protein; KEGG: yen:YE2156 hypothetical protein; NLP/P60 protein 3024436..3025335 Rahnella sp. Y9602 10213791 YP_004213513.1 CDS Rahaq_2783 NC_015061.1 3025481 3025675 D hypothetical protein 3025481..3025675 Rahnella sp. Y9602 10213792 YP_004213514.1 CDS Rahaq_2784 NC_015061.1 3025925 3026950 D KEGG: ypb:YPTS_2374 DNA-binding transcriptional repressor PurR; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator 3025925..3026950 Rahnella sp. Y9602 10213793 YP_004213515.1 CDS Rahaq_2785 NC_015061.1 3026987 3027892 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2194 DNA-binding transcriptional regulator; LysR family transcriptional regulator complement(3026987..3027892) Rahnella sp. Y9602 10213794 YP_004213516.1 CDS Rahaq_2786 NC_015061.1 3028029 3029240 D KEGG: spe:Spro_2193 inner membrane transport protein YdhC; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; Bcr/CflA subfamily drug resistance transporter 3028029..3029240 Rahnella sp. Y9602 10213795 YP_004213517.1 CDS Rahaq_2787 NC_015061.1 3029601 3030752 D KEGG: spe:Spro_2192 cyclopropane fatty acyl phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 3029601..3030752 Rahnella sp. Y9602 10213796 YP_004213518.1 CDS Rahaq_2788 NC_015061.1 3030831 3031484 R TIGRFAM: riboflavin synthase, subunit alpha; KEGG: spe:Spro_2190 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein; riboflavin synthase, subunit alpha complement(3030831..3031484) Rahnella sp. Y9602 10213797 YP_004213519.1 CDS Rahaq_2789 NC_015061.1 3031739 3033112 D KEGG: yen:YE2163 multidrug efflux protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 3031739..3033112 Rahnella sp. Y9602 10213798 YP_004213520.1 CDS Rahaq_2790 NC_015061.1 3034010 3035476 D TIGRFAM: pyruvate kinase; KEGG: spe:Spro_2187 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase 3034010..3035476 Rahnella sp. Y9602 10213801 YP_004213521.1 CDS Rahaq_2791 NC_015061.1 3035770 3036006 D PFAM: hypothetical protein; KEGG: spe:Spro_2186 hypothetical protein; hypothetical protein 3035770..3036006 Rahnella sp. Y9602 10213802 YP_004213522.1 CDS Rahaq_2792 NC_015061.1 3036018 3036122 R hypothetical protein complement(3036018..3036122) Rahnella sp. Y9602 10213803 YP_004213523.1 CDS Rahaq_2793 NC_015061.1 3036221 3037234 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding lysin domain; KEGG: yen:YE2166 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein complement(3036221..3037234) Rahnella sp. Y9602 10213804 YP_004213524.1 CDS Rahaq_2794 NC_015061.1 3037496 3037909 R PFAM: Fe-S metabolism associated SufE; KEGG: yen:YE2167 cysteine desufuration protein SufE; Fe-S metabolism associated SufE complement(3037496..3037909) Rahnella sp. Y9602 10213805 YP_004213525.1 CDS Rahaq_2795 NC_015061.1 3037938 3039158 R KEGG: spe:Spro_2183 SufS subfamily cysteine desulfurase; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; SufS subfamily cysteine desulfurase complement(3037938..3039158) Rahnella sp. Y9602 10213806 YP_004213526.1 CDS Rahaq_2796 NC_015061.1 3039158 3040459 R KEGG: spe:Spro_2182 FeS assembly protein SufD; TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; FeS assembly protein SufD complement(3039158..3040459) Rahnella sp. Y9602 10213807 YP_004213527.1 CDS Rahaq_2797 NC_015061.1 3040434 3041180 R TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: spe:Spro_2181 cysteine desulfurase ATPase; SMART: AAA ATPase; FeS assembly ATPase SufC complement(3040434..3041180) Rahnella sp. Y9602 10213808 YP_004213528.1 CDS Rahaq_2798 NC_015061.1 3041304 3042827 R KEGG: spe:Spro_2180 cysteine desulfurase activator complex subunit SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; FeS assembly protein SufB complement(3041304..3042827) Rahnella sp. Y9602 10213809 YP_004213529.1 CDS Rahaq_2799 NC_015061.1 3042874 3043245 R KEGG: yen:YE2172 iron-sulfur cluster assembly scaffold protein; TIGRFAM: FeS assembly scaffold SufA; iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; FeS assembly scaffold SufA complement(3042874..3043245) Rahnella sp. Y9602 10213810 YP_004213530.1 CDS Rahaq_2800 NC_015061.1 3043702 3044106 D KEGG: spe:Spro_2178 hypothetical protein; hypothetical protein 3043702..3044106 Rahnella sp. Y9602 10213811 YP_004213531.1 CDS Rahaq_2801 NC_015061.1 3044223 3044642 R PFAM: thioesterase superfamily protein; KEGG: spe:Spro_2177 thioesterase superfamily protein; thioesterase superfamily protein complement(3044223..3044642) Rahnella sp. Y9602 10213812 YP_004213532.1 CDS Rahaq_2802 NC_015061.1 3044658 3047714 R PFAM: FAD linked oxidase domain protein; KEGG: spe:Spro_2176 FAD linked oxidase domain-containing protein; FAD linked oxidase domain-containing protein complement(3044658..3047714) Rahnella sp. Y9602 10213813 YP_004213533.1 CDS Rahaq_2803 NC_015061.1 3047797 3048039 R KEGG: dan:Dana_GF12714 GF12714 gene product from transcript GF12714-RA; hypothetical protein complement(3047797..3048039) Rahnella sp. Y9602 10213814 YP_004213534.1 CDS Rahaq_2804 NC_015061.1 3048042 3049139 D PFAM: protein of unknown function UPF0118; KEGG: spe:Spro_2175 hypothetical protein; hypothetical protein 3048042..3049139 Rahnella sp. Y9602 10213815 YP_004213535.1 CDS Rahaq_2805 NC_015061.1 3049576 3051951 R KEGG: pct:PC1_2456 phosphoenolpyruvate synthase; TIGRFAM: phosphoenolpyruvate synthase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein; phosphoenolpyruvate synthase complement(3049576..3051951) Rahnella sp. Y9602 10213816 YP_004213536.1 CDS Rahaq_2806 NC_015061.1 3052460 3053281 D PFAM: protein of unknown function DUF299; KEGG: spe:Spro_2173 hypothetical protein; hypothetical protein 3052460..3053281 Rahnella sp. Y9602 10213817 YP_004213537.1 CDS Rahaq_2807 NC_015061.1 3053411 3054457 D TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: ent:Ent638_1743 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase 3053411..3054457 Rahnella sp. Y9602 10213818 YP_004213538.1 CDS Rahaq_2808 NC_015061.1 3054807 3055844 D PFAM: Haemin-degrading family protein; KEGG: ypb:YPTS_0363 hemin-degrading family protein; hemin-degrading family protein 3054807..3055844 Rahnella sp. Y9602 10213819 YP_004213539.1 CDS Rahaq_2809 NC_015061.1 3055841 3056671 D PFAM: periplasmic binding protein; KEGG: spe:Spro_2167 periplasmic binding protein; periplasmic binding protein 3055841..3056671 Rahnella sp. Y9602 10213820 YP_004213540.1 CDS Rahaq_2810 NC_015061.1 3056668 3057696 D PFAM: transport system permease protein; KEGG: yen:YE0328 hemin transport system permease protein HmuU; transport system permease 3056668..3057696 Rahnella sp. Y9602 10213821 YP_004213541.1 CDS Rahaq_2811 NC_015061.1 3057689 3058477 D KEGG: spe:Spro_2165 hemin importer ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3057689..3058477 Rahnella sp. Y9602 10213822 YP_004213542.1 CDS Rahaq_2812 NC_015061.1 3058524 3059978 R PFAM: protein of unknown function UPF0061; KEGG: spe:Spro_2164 hypothetical protein; hypothetical protein complement(3058524..3059978) Rahnella sp. Y9602 10213823 YP_004213543.1 CDS Rahaq_2813 NC_015061.1 3060121 3060849 R PFAM: EAL domain protein; KEGG: spe:Spro_2163 diguanylate phosphodiesterase; diguanylate phosphodiesterase complement(3060121..3060849) Rahnella sp. Y9602 10213824 YP_004213544.1 CDS Rahaq_2814 NC_015061.1 3061231 3061341 R hypothetical protein complement(3061231..3061341) Rahnella sp. Y9602 10213825 YP_004213545.1 CDS Rahaq_2815 NC_015061.1 3061366 3062379 R KEGG: spe:Spro_2162 lipoate-protein ligase A; TIGRFAM: lipoyltransferase and lipoate-protein ligase; PFAM: biotin/lipoate A/B protein ligase; Lipoate protein ligase-like; lipoyltransferase and lipoate-protein ligase complement(3061366..3062379) Rahnella sp. Y9602 10213826 YP_004213546.1 CDS Rahaq_2816 NC_015061.1 3062476 3062955 R PFAM: NLP/P60 protein; KEGG: etr:ETAE_1805 lipoprotein; NLP/P60 protein complement(3062476..3062955) Rahnella sp. Y9602 10213827 YP_004213547.1 CDS Rahaq_2817 NC_015061.1 3063110 3063499 R KEGG: yen:YE2186 hypothetical protein; hypothetical protein complement(3063110..3063499) Rahnella sp. Y9602 10213828 YP_004213548.1 CDS Rahaq_2818 NC_015061.1 3063496 3063828 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: spe:Spro_2159 hypothetical protein; hypothetical protein complement(3063496..3063828) Rahnella sp. Y9602 10213829 YP_004213549.1 CDS Rahaq_2819 NC_015061.1 3063825 3065495 R PFAM: glycosyl transferase family 39; KEGG: yen:YE2188 4-amino-4-deoxy-L-arabinose transferase; glycosyl transferase family protein complement(3063825..3065495) Rahnella sp. Y9602 10213830 YP_004213550.1 CDS Rahaq_2820 NC_015061.1 3065495 3066394 R PFAM: polysaccharide deacetylase; KEGG: pmr:PMI1046 polysaccharide deacetylase; polysaccharide deacetylase complement(3065495..3066394) Rahnella sp. Y9602 10213831 YP_004213551.1 CDS Rahaq_2821 NC_015061.1 3066408 3068390 R PFAM: NAD-dependent epimerase/dehydratase; formyl transferase domain protein; KEGG: spe:Spro_2156 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; NAD-dependent epimerase/dehydratase complement(3066408..3068390) Rahnella sp. Y9602 10213832 YP_004213552.1 CDS Rahaq_2822 NC_015061.1 3068390 3069370 R PFAM: glycosyl transferase family 2; KEGG: spe:Spro_2155 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; family 2 glycosyl transferase complement(3068390..3069370) Rahnella sp. Y9602 10213833 YP_004213553.1 CDS Rahaq_2823 NC_015061.1 3069370 3070512 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: spe:Spro_2154 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase complement(3069370..3070512) Rahnella sp. Y9602 10213834 YP_004213554.1 CDS Rahaq_2824 NC_015061.1 3070762 3070878 R hypothetical protein complement(3070762..3070878) Rahnella sp. Y9602 10213835 YP_004213555.1 CDS Rahaq_2825 NC_015061.1 3070860 3071609 R KEGG: ypm:YP_2210 vitamin B12-transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(3070860..3071609) Rahnella sp. Y9602 10213836 YP_004213556.1 CDS Rahaq_2826 NC_015061.1 3071629 3072180 R KEGG: esa:ESA_02112 glutathione peroxidase; PFAM: glutathione peroxidase; peroxiredoxin complement(3071629..3072180) Rahnella sp. Y9602 10213837 YP_004213557.1 CDS Rahaq_2827 NC_015061.1 3072253 3073260 R PFAM: transport system permease protein; KEGG: spe:Spro_2151 vtamin B12-transporter permease; transport system permease complement(3072253..3073260) Rahnella sp. Y9602 10213838 YP_004213558.1 CDS Rahaq_2828 NC_015061.1 3073414 3073812 R PFAM: Protein of unknown function DUF2502; KEGG: yen:YE2196 hypothetical protein; hypothetical protein complement(3073414..3073812) Rahnella sp. Y9602 10213839 YP_004213559.1 CDS Rahaq_2829 NC_015061.1 3074084 3074242 D KEGG: pct:PC1_0085 hypothetical protein; hypothetical protein 3074084..3074242 Rahnella sp. Y9602 10213840 YP_004213560.1 CDS Rahaq_2830 NC_015061.1 3074593 3074889 R TIGRFAM: integration host factor, subunit alpha; PFAM: histone family protein DNA-binding protein; KEGG: etr:ETAE_1809 integration host factor, subunit alpha; SMART: histone family protein DNA-binding protein; integration host factor subunit alpha complement(3074593..3074889) Rahnella sp. Y9602 10213841 YP_004213561.1 CDS Rahaq_2831 NC_015061.1 3074894 3077281 R KEGG: spe:Spro_2149 phenylalanyl-tRNA synthetase subunit beta; TIGRFAM: phenylalanyl-tRNA synthetase, subunit beta; phenylalanyl-tRNA synthetase subunit beta complement(3074894..3077281) Rahnella sp. Y9602 10213842 YP_004213562.1 CDS Rahaq_2832 NC_015061.1 3077296 3078279 R KEGG: ctu:Ctu_18490 phenylalanyl-tRNA synthetase subunit alpha; TIGRFAM: phenylalanyl-tRNA synthetase, subunit alpha; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; phenylalanyl-tRNA synthetase, subunit alpha complement(3077296..3078279) Rahnella sp. Y9602 10213843 YP_004213563.1 CDS Rahaq_2833 NC_015061.1 3078629 3078985 R KEGG: yen:YE1915 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20; 50S ribosomal protein L20 complement(3078629..3078985) Rahnella sp. Y9602 10213844 YP_004213564.1 CDS Rahaq_2834 NC_015061.1 3079028 3079225 R KEGG: ypb:YPTS_2414 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35; 50S ribosomal protein L35 complement(3079028..3079225) Rahnella sp. Y9602 10213845 YP_004213565.1 CDS Rahaq_2835 NC_015061.1 3079321 3079872 R manually curated; TIGRFAM: translation initiation factor IF-3; KEGG: ypi:YpsIP31758_1713 translation initiation factor IF-3; PFAM: Translation initiation factor 3-like; translation initiation factor IF-3 complement(3079321..3079872) Rahnella sp. Y9602 10213846 YP_004213566.1 CDS Rahaq_2836 NC_015061.1 3079876 3081804 R KEGG: ddd:Dda3937_03683 threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain-containing protein; Anticodon-binding domain protein; threonyl-tRNA synthetase complement(3079876..3081804) Rahnella sp. Y9602 10213847 YP_004213567.1 CDS Rahaq_2837 NC_015061.1 3082094 3082774 D PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: spe:Spro_2141 multiple drug resistance protein MarC; multiple antibiotic resistance (MarC)-like protein 3082094..3082774 Rahnella sp. Y9602 10213848 YP_004213568.1 CDS Rahaq_2838 NC_015061.1 3082798 3083433 R PFAM: lytic transglycosylase catalytic; KEGG: spe:Spro_2135 lytic transglycosylase catalytic; lytic transglycosylase complement(3082798..3083433) Rahnella sp. Y9602 10213849 YP_004213569.1 CDS Rahaq_2839 NC_015061.1 3083756 3084625 D PFAM: Fructosamine/Ketosamine-3-kinase; KEGG: ypb:YPTS_2425 fructosamine kinase; fructosamine/Ketosamine-3-kinase 3083756..3084625 Rahnella sp. Y9602 10213850 YP_004213570.1 CDS Rahaq_2840 NC_015061.1 3084731 3085279 R KEGG: yen:YE1891 yfeABCD locus regulator; yfeABCD locus regulator complement(3084731..3085279) Rahnella sp. Y9602 10213851 YP_004213571.1 CDS Rahaq_2841 NC_015061.1 3085473 3086138 D KEGG: ebi:EbC_18740 phosphatase YniC; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 3085473..3086138 Rahnella sp. Y9602 10213852 YP_004213572.1 CDS Rahaq_2842 NC_015061.1 3086447 3087283 D KEGG: ypb:YPTS_2430 5-keto-4-deoxyuronate isomerase; PFAM: KduI/IolB isomerase; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase 3086447..3087283 Rahnella sp. Y9602 10213853 YP_004213573.1 CDS Rahaq_2843 NC_015061.1 3087362 3088123 D KEGG: pct:PC1_1909 2-deoxy-D-gluconate 3-dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; 2-deoxy-D-gluconate 3-dehydrogenase 3087362..3088123 Rahnella sp. Y9602 10213854 YP_004213574.1 CDS Rahaq_2844 NC_015061.1 3088276 3088833 D PFAM: membrane-bound metal-dependent hydrolase; KEGG: pct:PC1_1901 hypothetical protein; membrane-bound metal-dependent hydrolase 3088276..3088833 Rahnella sp. Y9602 10213855 YP_004213575.1 CDS Rahaq_2845 NC_015061.1 3089023 3090414 D PFAM: sodium:dicarboxylate symporter; KEGG: spe:Spro_2123 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 3089023..3090414 Rahnella sp. Y9602 10213856 YP_004213576.1 CDS Rahaq_2846 NC_015061.1 3090502 3091293 R KEGG: pct:PC1_1885 transcriptional regulator, IclR family; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; IclR family transcriptional regulator complement(3090502..3091293) Rahnella sp. Y9602 10213857 YP_004213577.1 CDS Rahaq_2847 NC_015061.1 3091533 3092930 D PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2121 major facilitator transporter; major facilitator superfamily protein 3091533..3092930 Rahnella sp. Y9602 10213858 YP_004213578.1 CDS Rahaq_2848 NC_015061.1 3092987 3093868 R PFAM: peptidase M48 Ste24p; KEGG: eca:ECA2427 heat shock protein HtpX; peptidase M48 Ste24p complement(3092987..3093868) Rahnella sp. Y9602 10213859 YP_004213579.1 CDS Rahaq_2850 NC_015061.1 3095479 3097551 R SMART: peptidase S41; PDZ/DHR/GLGF domain protein; TIGRFAM: carboxyl-terminal protease; KEGG: spe:Spro_2119 carboxy-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; carboxyl-terminal protease complement(3095479..3097551) Rahnella sp. Y9602 10213861 YP_004213580.1 CDS Rahaq_2851 NC_015061.1 3097571 3098260 R PFAM: Fertility inhibition FinO-like; KEGG: ypb:YPTS_2452 solute/DNA competence effector; Fertility inhibition FinO-like protein complement(3097571..3098260) Rahnella sp. Y9602 10213862 YP_004213581.1 CDS Rahaq_2852 NC_015061.1 3098356 3098853 R SMART: GAF domain protein; KEGG: yen:YE1866 hypothetical protein; GAF sensor protein complement(3098356..3098853) Rahnella sp. Y9602 10213863 YP_004213582.1 CDS Rahaq_2853 NC_015061.1 3099111 3100358 D KEGG: spe:Spro_2116 PqiA family integral membrane protein; TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A; PqiA family integral membrane protein 3099111..3100358 Rahnella sp. Y9602 10213864 YP_004213583.1 CDS Rahaq_2854 NC_015061.1 3100327 3102957 D PFAM: Mammalian cell entry related domain protein; KEGG: yen:YE1864 hypothetical protein; mammalian cell entry domain-containing protein 3100327..3102957 Rahnella sp. Y9602 10213865 YP_004213584.1 CDS Rahaq_2855 NC_015061.1 3103042 3104559 D KEGG: spe:Spro_2113 rRNA (cytosine-C(5)-)-methyltransferase RsmF; TIGRFAM: RNA methylase, NOL1/NOP2/sun family; PFAM: Fmu (Sun) domain protein; RNA methylase 3103042..3104559 Rahnella sp. Y9602 10213866 YP_004213585.1 CDS Rahaq_2856 NC_015061.1 3104931 3106652 D TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; KEGG: yen:YE1855 hypothetical protein; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase 3104931..3106652 Rahnella sp. Y9602 10213867 YP_004213586.1 CDS Rahaq_2857 NC_015061.1 3106846 3107088 D PFAM: protein of unknown function DUF1480; KEGG: spe:Spro_2106 hypothetical protein; hypothetical protein 3106846..3107088 Rahnella sp. Y9602 10213868 YP_004213587.1 CDS Rahaq_2858 NC_015061.1 3107132 3107782 R KEGG: spe:Spro_2105 hypothetical protein; hypothetical protein complement(3107132..3107782) Rahnella sp. Y9602 10213869 YP_004213588.1 CDS Rahaq_2859 NC_015061.1 3107881 3108273 R PFAM: protein of unknown function DUF437; KEGG: ypb:YPTS_2463 hypothetical protein; hypothetical protein complement(3107881..3108273) Rahnella sp. Y9602 10213870 YP_004213589.1 CDS Rahaq_2860 NC_015061.1 3108371 3111211 R KEGG: cyn:Cyan7425_3973 KWG repeat protein; hypothetical protein complement(3108371..3111211) Rahnella sp. Y9602 10213871 YP_004213590.1 CDS Rahaq_2861 NC_015061.1 3111211 3113973 R KEGG: cts:Ctha_0023 KWG repeat protein; hypothetical protein complement(3111211..3113973) Rahnella sp. Y9602 10213872 YP_004213591.1 CDS Rahaq_2862 NC_015061.1 3114490 3114747 D manually curated; KEGG: kva:Kvar_1956 hypothetical protein; hypothetical protein 3114490..3114747 Rahnella sp. Y9602 10213873 YP_004213592.1 CDS Rahaq_2863 NC_015061.1 3115058 3116290 D TIGRFAM: amidohydrolase; KEGG: rsl:RPSI07_mp0230 amidohydrolase; hippurate hydrolase protein (similar to HipO); PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 3115058..3116290 Rahnella sp. Y9602 10213874 YP_004213593.1 CDS Rahaq_2864 NC_015061.1 3116287 3116985 R PFAM: Extensin family protein; KEGG: eca:ECA2466 hypothetical protein; extensin family protein complement(3116287..3116985) Rahnella sp. Y9602 10213875 YP_004213594.1 CDS Rahaq_2865 NC_015061.1 3117328 3117954 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: eay:EAM_1064 alcohol dehydrogenase, propanol-preferring; alcohol dehydrogenase complement(3117328..3117954) Rahnella sp. Y9602 10213876 YP_004213595.1 CDS Rahaq_2866 NC_015061.1 3118554 3120209 D KEGG: ddd:Dda3937_02184 aspartate chemoreceptor protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3118554..3120209 Rahnella sp. Y9602 10213877 YP_004213596.1 CDS Rahaq_2868 NC_015061.1 3121304 3122215 R KEGG: enc:ECL_A245 cation efflux protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter complement(3121304..3122215) Rahnella sp. Y9602 10213879 YP_004213597.1 CDS Rahaq_2869 NC_015061.1 3122306 3122569 R KEGG: enc:ECL_A246 hypothetical protein; hypothetical protein complement(3122306..3122569) Rahnella sp. Y9602 10213880 YP_004213598.1 CDS Rahaq_2871 NC_015061.1 3124019 3125410 D PFAM: AAA-4 family protein; KEGG: slo:Shew_1142 transcriptional regulator; transcriptional regulator 3124019..3125410 Rahnella sp. Y9602 10213882 YP_004213599.1 CDS Rahaq_2873 NC_015061.1 3125682 3126476 R KEGG: epy:EpC_07540 transposase subunit; manually curated; PFAM: Integrase catalytic region; integrase catalytic subunit complement(3125682..3126476) Rahnella sp. Y9602 10213884 YP_004213600.1 CDS Rahaq_2874 NC_015061.1 3126527 3126793 R PFAM: transposase IS3/IS911 family protein; KEGG: ent:Ent638_4321 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(3126527..3126793) Rahnella sp. Y9602 10213885 YP_004213601.1 CDS Rahaq_2877 NC_015061.1 3127590 3128003 R PFAM: GCN5-related N-acetyltransferase; KEGG: bph:Bphy_4755 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(3127590..3128003) Rahnella sp. Y9602 10213888 YP_004213602.1 CDS Rahaq_2879 NC_015061.1 3128413 3128778 R KEGG: pam:PANA_3394 hypothetical protein; hypothetical protein complement(3128413..3128778) Rahnella sp. Y9602 10213890 YP_004213603.1 CDS Rahaq_2881 NC_015061.1 3129510 3129845 R PFAM: Protein of unknown function DUF2511; KEGG: dze:Dd1591_2234 hypothetical protein; hypothetical protein complement(3129510..3129845) Rahnella sp. Y9602 10213892 YP_004213604.1 CDS Rahaq_2882 NC_015061.1 3129896 3130780 R KEGG: spe:Spro_1944 copper resistance D domain-containing protein; copper resistance D domain-containing protein complement(3129896..3130780) Rahnella sp. Y9602 10213893 YP_004213605.1 CDS Rahaq_2883 NC_015061.1 3130784 3131167 R PFAM: copper resistance protein CopC; KEGG: ypb:YPTS_1785 copper resistance protein CopC; copper resistance protein CopC complement(3130784..3131167) Rahnella sp. Y9602 10213894 YP_004213606.1 CDS Rahaq_2884 NC_015061.1 3131309 3131815 R KEGG: dze:Dd1591_2236 ferroxidase; PFAM: Ferritin Dps family protein; ferroxidase complement(3131309..3131815) Rahnella sp. Y9602 10213895 YP_004213607.1 CDS Rahaq_2885 NC_015061.1 3132222 3132452 D PFAM: DNA polymerase II subunit beta; KEGG: spe:Spro_1941 DNA polymerase III subunit theta; DNA polymerase II subunit beta 3132222..3132452 Rahnella sp. Y9602 10213896 YP_004213608.1 CDS Rahaq_2886 NC_015061.1 3132472 3133428 R KEGG: spe:Spro_1940 proline iminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold; proline iminopeptidase complement(3132472..3133428) Rahnella sp. Y9602 10213897 YP_004213609.1 CDS Rahaq_2887 NC_015061.1 3133706 3133807 D KEGG: ypb:YPTS_1781 hypothetical protein; hypothetical protein 3133706..3133807 Rahnella sp. Y9602 10213898 YP_004213610.1 CDS Rahaq_2888 NC_015061.1 3133925 3135964 R KEGG: spe:Spro_1937 oligopeptidase B; PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; oligopeptidase B complement(3133925..3135964) Rahnella sp. Y9602 10213899 YP_004213611.1 CDS Rahaq_2889 NC_015061.1 3136096 3136461 R KEGG: spe:Spro_2801 hypothetical protein; hypothetical protein complement(3136096..3136461) Rahnella sp. Y9602 10213900 YP_004213612.1 CDS Rahaq_2890 NC_015061.1 3136623 3138005 R KEGG: ypy:YPK_2446 ATP-dependent RNA helicase DbpA; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase complement(3136623..3138005) Rahnella sp. Y9602 10213901 YP_004213613.1 CDS Rahaq_2891 NC_015061.1 3138256 3139434 D TIGRFAM: phosphoribosylglycinamide formyltransferase 2; KEGG: spe:Spro_2805 phosphoribosylglycinamide formyltransferase 2; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; phosphoribosylglycinamide formyltransferase 2 3138256..3139434 Rahnella sp. Y9602 10213902 YP_004213614.1 CDS Rahaq_2892 NC_015061.1 3139524 3139706 R PFAM: protein of unknown function UPF0181; KEGG: spe:Spro_2806 hypothetical protein; hypothetical protein complement(3139524..3139706) Rahnella sp. Y9602 10213903 YP_004213615.1 CDS Rahaq_2893 NC_015061.1 3139868 3141244 D KEGG: dze:Dd1591_1987 para-aminobenzoate synthase, subunit I; TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; para-aminobenzoate synthase subunit I 3139868..3141244 Rahnella sp. Y9602 10213904 YP_004213616.1 CDS Rahaq_2894 NC_015061.1 3141241 3141843 D PFAM: NUDIX hydrolase; KEGG: yen:YE1780 hypothetical protein; NUDIX hydrolase 3141241..3141843 Rahnella sp. Y9602 10213905 YP_004213617.1 CDS Rahaq_2895 NC_015061.1 3142051 3143415 D TIGRFAM: L-serine dehydratase 1; KEGG: spe:Spro_2810 L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 3142051..3143415 Rahnella sp. Y9602 10213906 YP_004213618.1 CDS Rahaq_2896 NC_015061.1 3143871 3145463 D KEGG: spe:Spro_2811 EAL domain-containing protein; PFAM: EAL domain protein; SMART: EAL domain protein; diguanylate phosphodiesterase 3143871..3145463 Rahnella sp. Y9602 10213907 YP_004213619.1 CDS Rahaq_2897 NC_015061.1 3145540 3147099 R PFAM: Integral membrane protein TerC; CBS domain containing protein; transporter-associated region; KEGG: ypb:YPTS_1759 integral membrane protein TerC; integral membrane protein TerC complement(3145540..3147099) Rahnella sp. Y9602 10213908 YP_004213620.1 CDS Rahaq_2898 NC_015061.1 3147691 3148653 D TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB subunit; PTS system, mannose/fructose/sorbose family, IIA subunit; KEGG: spe:Spro_2813 PTS system mannose/fructose/sorbose family transporter subunit IIB; PFAM: PTS system sorbose subfamily IIB component; PTS system fructose subfamily IIA component; PTS system mannose/fructose/sorbose family transporter subunit IIB 3147691..3148653 Rahnella sp. Y9602 10213909 YP_004213621.1 CDS Rahaq_2899 NC_015061.1 3148744 3149541 D KEGG: pam:PANA_2146 ManY; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIC subunit; PFAM: phosphotransferase system PTS sorbose-specific IIC subunit; PTS system mannose/fructose/sorbose family transporter subunit IIC 3148744..3149541 Rahnella sp. Y9602 10213910 YP_004213622.1 CDS Rahaq_2900 NC_015061.1 3149553 3150395 D KEGG: spe:Spro_2815 PTS system mannose-specific transporter subunit IID; TIGRFAM: PTS system, mannose/fructose/sorbose family, IID subunit; PFAM: PTS system mannose/fructose/sorbose family IID component; PTS system mannose/fructose/sorbose family transporter subunit IID 3149553..3150395 Rahnella sp. Y9602 10213911 YP_004213623.1 CDS Rahaq_2901 NC_015061.1 3150502 3150960 D PFAM: protein of unknown function DUF986; KEGG: yen:YE1773 hypothetical protein; hypothetical protein 3150502..3150960 Rahnella sp. Y9602 10213912 YP_004213624.1 CDS Rahaq_2902 NC_015061.1 3151156 3151743 D PFAM: protein of unknown function DUF204; KEGG: spe:Spro_2817 hypothetical protein; hypothetical protein 3151156..3151743 Rahnella sp. Y9602 10213913 YP_004213625.1 CDS Rahaq_2903 NC_015061.1 3151735 3152556 R KEGG: ypb:YPTS_1749 23S rRNA methyltransferase A; PFAM: methyltransferase type 11; rRNA (guanine-N(1)-)-methyltransferase complement(3151735..3152556) Rahnella sp. Y9602 10213914 YP_004213626.1 CDS Rahaq_2904 NC_015061.1 3152704 3153405 D PFAM: protein of unknown function DUF152; KEGG: spe:Spro_2821 hypothetical protein; hypothetical protein 3152704..3153405 Rahnella sp. Y9602 10213915 YP_004213627.1 CDS Rahaq_2905 NC_015061.1 3153465 3153674 R KEGG: spe:Spro_2822 cold shock-like protein CspC; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock protein complement(3153465..3153674) Rahnella sp. Y9602 10213916 YP_004213628.1 CDS Rahaq_2906 NC_015061.1 3154956 3155945 R KEGG: spe:Spro_2823 beta-lactamase domain-containing protein; beta-lactamase domain-containing protein complement(3154956..3155945) Rahnella sp. Y9602 10213917 YP_004213629.1 CDS Rahaq_2907 NC_015061.1 3156133 3156423 D KEGG: spe:Spro_2824 hypothetical protein; hypothetical protein 3156133..3156423 Rahnella sp. Y9602 10213918 YP_004213630.1 CDS Rahaq_2908 NC_015061.1 3156484 3156720 R KEGG: yen:YE1760 hypothetical protein; hypothetical protein complement(3156484..3156720) Rahnella sp. Y9602 10213919 YP_004213631.1 CDS Rahaq_2909 NC_015061.1 3156856 3157158 R KEGG: ypb:YPTS_1741 hypothetical protein; hypothetical protein complement(3156856..3157158) Rahnella sp. Y9602 10213920 YP_004213632.1 CDS Rahaq_2910 NC_015061.1 3157308 3157580 R KEGG: spe:Spro_2828 hypothetical protein; hypothetical protein complement(3157308..3157580) Rahnella sp. Y9602 10213921 YP_004213633.1 CDS Rahaq_2911 NC_015061.1 3158639 3161332 D KEGG: esa:ESA_02934 hypothetical protein; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; outer membrane autotransporter barrel domain-containing protein 3158639..3161332 Rahnella sp. Y9602 10213922 YP_004213634.1 CDS Rahaq_2912 NC_015061.1 3161516 3161752 D KEGG: spe:Spro_2830 hypothetical protein; hypothetical protein 3161516..3161752 Rahnella sp. Y9602 10213923 YP_004213635.1 CDS Rahaq_2913 NC_015061.1 3161816 3162061 R KEGG: ypb:YPTS_1738 hypothetical protein; hypothetical protein complement(3161816..3162061) Rahnella sp. Y9602 10213924 YP_004213636.1 CDS Rahaq_2914 NC_015061.1 3162263 3162454 D PFAM: protein of unknown function DUF1482; KEGG: ctu:Ctu_25200 uncharacterized protein YebW; hypothetical protein 3162263..3162454 Rahnella sp. Y9602 10213925 YP_004213637.1 CDS Rahaq_2915 NC_015061.1 3162582 3164222 D PFAM: extracellular solute-binding protein family 5; KEGG: enc:ECL_02675 extracellular solute-binding protein; family 5 extracellular solute-binding protein 3162582..3164222 Rahnella sp. Y9602 10213926 YP_004213638.1 CDS Rahaq_2916 NC_015061.1 3164362 3164577 D KEGG: spe:Spro_2101 hypothetical protein; hypothetical protein 3164362..3164577 Rahnella sp. Y9602 10213927 YP_004213639.1 CDS Rahaq_2917 NC_015061.1 3164646 3164933 R KEGG: spe:Spro_1864 hypothetical protein; hypothetical protein complement(3164646..3164933) Rahnella sp. Y9602 10213928 YP_004213640.1 CDS Rahaq_2918 NC_015061.1 3165617 3166126 R KEGG: kva:Kvar_2271 hypothetical protein; hypothetical protein complement(3165617..3166126) Rahnella sp. Y9602 10213929 YP_004213641.1 CDS Rahaq_2919 NC_015061.1 3166468 3167721 R TIGRFAM: isocitrate dehydrogenase, NADP-dependent; KEGG: spe:Spro_2025 isocitrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; isocitrate dehydrogenase complement(3166468..3167721) Rahnella sp. Y9602 10213930 YP_004213642.1 CDS Rahaq_2920 NC_015061.1 3167854 3168480 D PFAM: pseudouridine synthase; KEGG: yen:YE1724 pseudouridine synthase; pseudouridine synthase 3167854..3168480 Rahnella sp. Y9602 10213931 YP_004213643.1 CDS Rahaq_2921 NC_015061.1 3168473 3168919 D PFAM: NUDIX hydrolase; KEGG: eum:ECUMN_1378 bifunctional thiamin pyrimidine pyrophosphate hydrolase and thiamin pyrophosphate hydrolase; NUDIX hydrolase 3168473..3168919 Rahnella sp. Y9602 10213932 YP_004213644.1 CDS Rahaq_2922 NC_015061.1 3169156 3170265 D TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: ctu:Ctu_17100 tRNA-specific 2-thiouridylase MnmA; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase 3169156..3170265 Rahnella sp. Y9602 10213933 YP_004213645.1 CDS Rahaq_2923 NC_015061.1 3170456 3171082 D PFAM: protein of unknown function DUF489; KEGG: ypk:y1798 hypothetical protein; hypothetical protein 3170456..3171082 Rahnella sp. Y9602 10213934 YP_004213646.1 CDS Rahaq_2924 NC_015061.1 3171106 3172476 D KEGG: ypb:YPTS_2515 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase domain-containing protein; adenylosuccinate lyase 3171106..3172476 Rahnella sp. Y9602 10213935 YP_004213647.1 CDS Rahaq_2925 NC_015061.1 3172522 3173844 R PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein; transposase IS4 family protein complement(3172522..3173844) Rahnella sp. Y9602 10213936 YP_004213648.1 CDS Rahaq_2926 NC_015061.1 3173861 3175015 D PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ddd:Dda3937_04456 transposase; transposase IS116/IS110/IS902 family protein 3173861..3175015 Rahnella sp. Y9602 10213937 YP_004213649.1 CDS Rahaq_2927 NC_015061.1 3175458 3176132 D KEGG: spe:Spro_2013 DNA-binding transcriptional regulator PhoP; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator 3175458..3176132 Rahnella sp. Y9602 10213938 YP_004213650.1 CDS Rahaq_2928 NC_015061.1 3176159 3177616 D KEGG: spe:Spro_2012 sensor protein PhoQ; PFAM: PhoQ Sensor domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 3176159..3177616 Rahnella sp. Y9602 10213939 YP_004213651.1 CDS Rahaq_2929 NC_015061.1 3177777 3178898 D SMART: transcription factor jumonji jmjC domain-containing protein; KEGG: spe:Spro_2011 cupin 4 family protein; transcription factor jumonji jmjC domain-containing protein 3177777..3178898 Rahnella sp. Y9602 10213940 YP_004213652.1 CDS Rahaq_2930 NC_015061.1 3179971 3181005 R PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ppr:PBPRB1640 hypothetical protein; transposase IS116/IS110/IS902 family protein complement(3179971..3181005) Rahnella sp. Y9602 10213941 YP_004213653.1 CDS Rahaq_2931 NC_015061.1 3181186 3181812 R KEGG: cro:ROD_40891 hypothetical protein; hypothetical protein complement(3181186..3181812) Rahnella sp. Y9602 10213942 YP_004213654.1 CDS Rahaq_2932 NC_015061.1 3182013 3183242 R TIGRFAM: peptidase T; KEGG: ypy:YPK_1712 peptidase T; PFAM: peptidase dimerisation domain protein; peptidase M20; peptidase T complement(3182013..3183242) Rahnella sp. Y9602 10213943 YP_004213655.1 CDS Rahaq_2933 NC_015061.1 3183389 3184216 R PFAM: Silent information regulator protein Sir2; KEGG: spe:Spro_2005 NAD-dependent deacetylase; silent information regulator protein Sir2 complement(3183389..3184216) Rahnella sp. Y9602 10213944 YP_004213656.1 CDS Rahaq_2934 NC_015061.1 3184267 3185517 R KEGG: spe:Spro_2003 outer membrane-specific lipoprotein transporter subunit LolE; TIGRFAM: lipoprotein releasing system, transmembrane protein LolE; lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; lipoprotein releasing system, transmembrane protein LolE complement(3184267..3185517) Rahnella sp. Y9602 10213945 YP_004213657.1 CDS Rahaq_2935 NC_015061.1 3185517 3186221 R TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; KEGG: spe:Spro_2002 lipoprotein transporter ATP-binding subunit; SMART: AAA ATPase; lipoprotein releasing system, ATP-binding protein complement(3185517..3186221) Rahnella sp. Y9602 10213946 YP_004213658.1 CDS Rahaq_2936 NC_015061.1 3186214 3187416 R manually curated; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; KEGG: sdy:SDY_2034 outer membrane-specific lipoprotein transporter subunit LolC; PFAM: protein of unknown function DUF214; lipoprotein releasing system transmembrane protein LolC/E family complement(3186214..3187416) Rahnella sp. Y9602 10213947 YP_004213659.1 CDS Rahaq_2937 NC_015061.1 3187655 3191098 D TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; DEAD/DEAH box helicase domain protein; helicase domain protein; TRCF domain protein; KEGG: spe:Spro_1998 transcription-repair coupling factor; SMART: DEAD-like helicase ; helicase domain protein; transcription-repair coupling factor 3187655..3191098 Rahnella sp. Y9602 10213948 YP_004213660.1 CDS Rahaq_2938 NC_015061.1 3191173 3191709 R KEGG: pwa:Pecwa_2791 hypothetical protein; hypothetical protein complement(3191173..3191709) Rahnella sp. Y9602 10213949 YP_004213661.1 CDS Rahaq_2939 NC_015061.1 3192068 3193372 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ypb:YPTS_2531 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(3192068..3193372) Rahnella sp. Y9602 10213950 YP_004213662.1 CDS Rahaq_2940 NC_015061.1 3193695 3194237 R PFAM: protein of unknown function UPF0227; KEGG: spe:Spro_1925 hypothetical protein; hypothetical protein complement(3193695..3194237) Rahnella sp. Y9602 10213951 YP_004213663.1 CDS Rahaq_2941 NC_015061.1 3194290 3195318 R PFAM: glycoside hydrolase family 3 domain protein; KEGG: spe:Spro_1924 beta-hexosaminidase; glycoside hydrolase complement(3194290..3195318) Rahnella sp. Y9602 10213952 YP_004213664.1 CDS Rahaq_2942 NC_015061.1 3195367 3196224 R KEGG: spe:Spro_1923 thiamine kinase; PFAM: aminoglycoside phosphotransferase; Thiamine kinase complement(3195367..3196224) Rahnella sp. Y9602 10213953 YP_004213665.1 CDS Rahaq_2943 NC_015061.1 3196208 3196810 R TIGRFAM: membrane lipoprotein lipid attachment site; KEGG: spe:Spro_1922 membrane lipoprotein lipid attachment site; membrane lipoprotein lipid attachment site complement(3196208..3196810) Rahnella sp. Y9602 10213954 YP_004213666.1 CDS Rahaq_2944 NC_015061.1 3196832 3197200 R PFAM: protein of unknown function DUF1425; KEGG: spe:Spro_1921 hypothetical protein; hypothetical protein complement(3196832..3197200) Rahnella sp. Y9602 10213955 YP_004213667.1 CDS Rahaq_2945 NC_015061.1 3197209 3197562 R PFAM: histidine triad (HIT) protein; KEGG: spe:Spro_1920 histidine triad (HIT) protein; histidine triad (HIT) protein complement(3197209..3197562) Rahnella sp. Y9602 10213956 YP_004213668.1 CDS Rahaq_2946 NC_015061.1 3197982 3198986 R PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ddd:Dda3937_00500 ISEch4 transposase; transposase IS116/IS110/IS902 family protein complement(3197982..3198986) Rahnella sp. Y9602 10213957 YP_004213669.1 CDS Rahaq_2947 NC_015061.1 3199102 3200535 R TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, maltose and glucose-specific subfamily, IIC subunit; PTS system, glucose-like IIB subunint; KEGG: spe:Spro_1914 PTS system glucose-specific transporter subunits IIBC; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; PTS system glucose-specific transporter subunit IIBC complement(3199102..3200535) Rahnella sp. Y9602 10213958 YP_004213670.1 CDS Rahaq_2948 NC_015061.1 3200868 3201668 R KEGG: ypb:YPTS_2552 metallodependent hydrolase; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; TatD family hydrolase complement(3200868..3201668) Rahnella sp. Y9602 10213959 YP_004213671.1 CDS Rahaq_2949 NC_015061.1 3201710 3202729 R KEGG: spe:Spro_1912 DNA polymerase III subunit delta'; TIGRFAM: DNA polymerase III, delta prime subunit; PFAM: DNA polymerase III subunit delta; DNA polymerase III subunit delta' complement(3201710..3202729) Rahnella sp. Y9602 10213960 YP_004213672.1 CDS Rahaq_2950 NC_015061.1 3202726 3203376 R TIGRFAM: thymidylate kinase; KEGG: spe:Spro_1911 thymidylate kinase; PFAM: thymidylate kinase; thymidylate kinase complement(3202726..3203376) Rahnella sp. Y9602 10213961 YP_004213673.1 CDS Rahaq_2951 NC_015061.1 3203366 3204391 R PFAM: aminodeoxychorismate lyase; KEGG: yen:YE1639 hypothetical protein; aminodeoxychorismate lyase complement(3203366..3204391) Rahnella sp. Y9602 10213962 YP_004213674.1 CDS Rahaq_2952 NC_015061.1 3204409 3205206 R KEGG: yen:YE1638 4-amino-4-deoxychorismate lyase; TIGRFAM: aminodeoxychorismate lyase; PFAM: aminotransferase class IV; aminodeoxychorismate lyase complement(3204409..3205206) Rahnella sp. Y9602 10213963 YP_004213675.1 CDS Rahaq_2953 NC_015061.1 3205433 3206674 R KEGG: dda:Dd703_1589 3-oxoacyl-(acyl carrier protein) synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; 3-oxoacyl-ACP synthase complement(3205433..3206674) Rahnella sp. Y9602 10213964 YP_004213676.1 CDS Rahaq_2955 NC_015061.1 3207166 3207900 R KEGG: eca:ECA1797 3-ketoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(3207166..3207900) Rahnella sp. Y9602 10213966 YP_004213677.1 CDS Rahaq_2956 NC_015061.1 3207914 3208843 R KEGG: spe:Spro_1905 malonyl CoA-acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; malonyl CoA-acyl carrier protein transacylase complement(3207914..3208843) Rahnella sp. Y9602 10213967 YP_004213678.1 CDS Rahaq_2957 NC_015061.1 3208862 3209815 R PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; manually curated; KEGG: spe:Spro_1904 3-oxoacyl-(acyl carrier protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; 3-oxoacyl-ACP synthase complement(3208862..3209815) Rahnella sp. Y9602 10213968 YP_004213679.1 CDS Rahaq_2958 NC_015061.1 3209822 3210856 R manually curated; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; KEGG: yen:YE1632 glycerol-3-phosphate acyltransferase PlsX; PFAM: fatty acid synthesis plsX protein; fatty acid/phospholipid synthesis protein PlsX complement(3209822..3210856) Rahnella sp. Y9602 10213969 YP_004213680.1 CDS Rahaq_2959 NC_015061.1 3210905 3211072 R KEGG: yen:YE1631 50S ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; 50S ribosomal protein L32 complement(3210905..3211072) Rahnella sp. Y9602 10213970 YP_004213681.1 CDS Rahaq_2960 NC_015061.1 3211085 3211609 R PFAM: protein of unknown function DUF177; KEGG: yen:YE1630 hypothetical protein; hypothetical protein complement(3211085..3211609) Rahnella sp. Y9602 10213971 YP_004213682.1 CDS Rahaq_2961 NC_015061.1 3211752 3212345 D KEGG: dda:Dd703_1581 maf protein; TIGRFAM: maf protein; PFAM: Maf family protein; maf protein 3211752..3212345 Rahnella sp. Y9602 10213972 YP_004213683.1 CDS Rahaq_2962 NC_015061.1 3212395 3213357 R TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: spe:Spro_1899 23S rRNA pseudouridylate synthase C; SMART: RNA-binding S4 domain protein; pseudouridine synthase complement(3212395..3213357) Rahnella sp. Y9602 10213973 YP_004213684.1 CDS Rahaq_2963 NC_015061.1 3213958 3217242 D KEGG: spe:Spro_1898 ribonuclease E; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein; ribonuclease, Rne/Rng family 3213958..3217242 Rahnella sp. Y9602 10213974 YP_004213685.1 CDS Rahaq_2964 NC_015061.1 3217316 3217603 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: yen:YE1626 hypothetical protein; antibiotic biosynthesis monooxygenase complement(3217316..3217603) Rahnella sp. Y9602 10213975 YP_004213686.1 CDS Rahaq_2965 NC_015061.1 3217675 3217776 R hypothetical protein complement(3217675..3217776) Rahnella sp. Y9602 10213976 YP_004213687.1 CDS Rahaq_2966 NC_015061.1 3217827 3218876 D TIGRFAM: dihydroorotase, homodimeric type; KEGG: yen:YE1625 dihydroorotase; PFAM: amidohydrolase; dihydroorotase, homodimeric type 3217827..3218876 Rahnella sp. Y9602 10213977 YP_004213688.1 CDS Rahaq_2967 NC_015061.1 3218958 3219212 D PFAM: DinI family protein; KEGG: spe:Spro_1895 DNA damage-inducible protein I; DinI family protein 3218958..3219212 Rahnella sp. Y9602 10213978 YP_004213689.1 CDS Rahaq_2968 NC_015061.1 3219559 3219813 D KEGG: spe:Spro_1893 biofilm formation regulatory protein BssS; biofilm formation regulatory protein BssS 3219559..3219813 Rahnella sp. Y9602 10213979 YP_004213690.1 CDS Rahaq_2969 NC_015061.1 3219958 3221073 D KEGG: ctu:Ctu_16360 N-methyltryptophan oxidase; PFAM: FAD dependent oxidoreductase; sarcosine oxidase 3219958..3221073 Rahnella sp. Y9602 10213980 YP_004213691.1 CDS Rahaq_2970 NC_015061.1 3221274 3221942 D KEGG: ypy:YPK_1671 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; LuxR family transcriptional regulator 3221274..3221942 Rahnella sp. Y9602 10213981 YP_004213692.1 CDS Rahaq_2971 NC_015061.1 3221990 3222196 D hypothetical protein 3221990..3222196 Rahnella sp. Y9602 10213982 YP_004213693.1 CDS Rahaq_2972 NC_015061.1 3222236 3223279 R PFAM: protein of unknown function UPF0118; KEGG: spe:Spro_1889 transport protein; hypothetical protein complement(3222236..3223279) Rahnella sp. Y9602 10213983 YP_004213694.1 CDS Rahaq_2973 NC_015061.1 3223309 3226404 R KEGG: yen:YE3595 integral membrane efflux protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(3223309..3226404) Rahnella sp. Y9602 10213984 YP_004213695.1 CDS Rahaq_2974 NC_015061.1 3226414 3227556 R KEGG: yen:YE3596 drug efflux protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(3226414..3227556) Rahnella sp. Y9602 10213985 YP_004213696.1 CDS Rahaq_2975 NC_015061.1 3228112 3228657 D KEGG: pwa:Pecwa_2822 cytochrome b561; cytochrome b561 3228112..3228657 Rahnella sp. Y9602 10213986 YP_004213697.1 CDS Rahaq_2976 NC_015061.1 3228719 3229297 D PFAM: YceI family protein; KEGG: spe:Spro_1887 YceI family protein; hypothetical protein 3228719..3229297 Rahnella sp. Y9602 10213987 YP_004213698.1 CDS Rahaq_2977 NC_015061.1 3229365 3230420 R KEGG: spe:Spro_1886 hypothetical protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; rhodanese domain-containing protein complement(3229365..3230420) Rahnella sp. Y9602 10213988 YP_004213699.1 CDS Rahaq_2978 NC_015061.1 3230649 3231746 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: ebi:EbC_16170 NADH-dependent flavin oxidoreductase; NADH:flavin oxidoreductase 3230649..3231746 Rahnella sp. Y9602 10213989 YP_004213700.1 CDS Rahaq_2979 NC_015061.1 3232123 3233058 D KEGG: spe:Spro_1884 lipid A biosynthesis lauroyl acyltransferase; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: lipid A biosynthesis acyltransferase; lipid A biosynthesis lauroyl acyltransferase 3232123..3233058 Rahnella sp. Y9602 10213990 YP_004213701.1 CDS Rahaq_2980 NC_015061.1 3233270 3233704 D PFAM: DoxX family protein; KEGG: yen:YE1611 hypothetical protein; DoxX family protein 3233270..3233704 Rahnella sp. Y9602 10213991 YP_004213702.1 CDS Rahaq_2981 NC_015061.1 3233969 3235207 D PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE1610 MFS family transporter; major facilitator superfamily protein 3233969..3235207 Rahnella sp. Y9602 10213992 YP_004213703.1 CDS Rahaq_2982 NC_015061.1 3235235 3235591 R KEGG: spe:Spro_1002 hypothetical protein; hypothetical protein complement(3235235..3235591) Rahnella sp. Y9602 10213993 YP_004213704.1 CDS Rahaq_2983 NC_015061.1 3235722 3236120 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: spe:Spro_1880 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase complement(3235722..3236120) Rahnella sp. Y9602 10213994 YP_004213705.1 CDS Rahaq_2984 NC_015061.1 3236335 3236742 D KEGG: spe:Spro_1874 hypothetical protein; hypothetical protein 3236335..3236742 Rahnella sp. Y9602 10213995 YP_004213706.1 CDS Rahaq_2985 NC_015061.1 3236749 3236994 R PFAM: protein of unknown function DUF1375; KEGG: spe:Spro_1872 hypothetical protein; hypothetical protein complement(3236749..3236994) Rahnella sp. Y9602 10213996 YP_004213707.1 CDS Rahaq_2986 NC_015061.1 3237203 3239785 R PFAM: glycosyl transferase family 2; KEGG: spe:Spro_1871 glucosyltransferase MdoH; family 2 glycosyl transferase complement(3237203..3239785) Rahnella sp. Y9602 10213997 YP_004213708.1 CDS Rahaq_2987 NC_015061.1 3239778 3241313 R PFAM: periplasmic glucan biosynthesis protein MdoG; KEGG: spe:Spro_1870 glucan biosynthesis protein G; periplasmic glucan biosynthesis protein MdoG complement(3239778..3241313) Rahnella sp. Y9602 10213998 YP_004213709.1 CDS Rahaq_2988 NC_015061.1 3241646 3242830 D PFAM: acyltransferase 3; KEGG: spe:Spro_1869 glucans biosynthesis protein; acyltransferase 3241646..3242830 Rahnella sp. Y9602 10213999 YP_004213710.1 CDS Rahaq_2989 NC_015061.1 3242914 3243948 R PFAM: secretion protein HlyD family protein; KEGG: ebi:EbC_32450 secretion protein HlyD family protein; secretion protein HlyD family protein complement(3242914..3243948) Rahnella sp. Y9602 10214000 YP_004213711.1 CDS Rahaq_2990 NC_015061.1 3244007 3245608 R PFAM: major facilitator superfamily MFS_1; KEGG: ebi:EbC_32440 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(3244007..3245608) Rahnella sp. Y9602 10214001 YP_004213712.1 CDS Rahaq_2991 NC_015061.1 3245857 3246651 D KEGG: ebi:EbC_32430 transcriptional regulator, IclR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; IclR family transcriptional regulator 3245857..3246651 Rahnella sp. Y9602 10214002 YP_004213713.1 CDS Rahaq_2992 NC_015061.1 3246666 3247112 D PFAM: UspA domain-containing protein; KEGG: pam:PANA_2735 hypothetical protein; UspA domain-containing protein 3246666..3247112 Rahnella sp. Y9602 10214003 YP_004213714.1 CDS Rahaq_2993 NC_015061.1 3247190 3247450 R KEGG: eic:NT01EI_1431 hypothetical protein; hypothetical protein complement(3247190..3247450) Rahnella sp. Y9602 10214004 YP_004213715.1 CDS Rahaq_2994 NC_015061.1 3247850 3248212 R PFAM: Protein of unknown function DUF2502; KEGG: yen:YE2196 hypothetical protein; hypothetical protein complement(3247850..3248212) Rahnella sp. Y9602 10214005 YP_004213716.1 CDS Rahaq_2995 NC_015061.1 3248464 3248595 R KEGG: spe:Spro_1866 hypothetical protein; hypothetical protein complement(3248464..3248595) Rahnella sp. Y9602 10214006 YP_004213717.1 CDS Rahaq_2996 NC_015061.1 3248781 3248993 D KEGG: spe:Spro_2832 hypothetical protein; hypothetical protein 3248781..3248993 Rahnella sp. Y9602 10214007 YP_004213718.1 CDS Rahaq_2997 NC_015061.1 3249070 3249330 R KEGG: eic:NT01EI_1431 hypothetical protein; hypothetical protein complement(3249070..3249330) Rahnella sp. Y9602 10214008 YP_004213719.1 CDS Rahaq_2998 NC_015061.1 3249382 3249657 R KEGG: pwa:Pecwa_1431 hypothetical protein; hypothetical protein complement(3249382..3249657) Rahnella sp. Y9602 10214009 YP_004213720.1 CDS Rahaq_2999 NC_015061.1 3249782 3250291 R PFAM: Extracytoplasmic function sigma factor YlaC; KEGG: spe:Spro_1865 hypothetical protein; Extracytoplasmic function sigma factor YlaC complement(3249782..3250291) Rahnella sp. Y9602 10214010 YP_004213721.1 CDS Rahaq_3000 NC_015061.1 3250469 3250945 D PFAM: transcription activator effector binding; KEGG: yen:YE2070 DNA gyrase inhibitor; transcription activator effector binding protein 3250469..3250945 Rahnella sp. Y9602 10214011 YP_004213722.1 CDS Rahaq_3001 NC_015061.1 3250950 3251714 R KEGG: spe:Spro_1631 DNA-binding transcriptional repressor DeoR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator complement(3250950..3251714) Rahnella sp. Y9602 10214012 YP_004213723.1 CDS Rahaq_3002 NC_015061.1 3251799 3252458 R PFAM: metallophosphoesterase; KEGG: ecd:ECDH10B_1335 serine/threonine-protein phosphatase; metallophosphoesterase complement(3251799..3252458) Rahnella sp. Y9602 10214013 YP_004213724.1 CDS Rahaq_3003 NC_015061.1 3252682 3252948 D KEGG: mat:MARTH_orf449 50S ribosomal protein L31; hypothetical protein 3252682..3252948 Rahnella sp. Y9602 10214014 YP_004213725.1 CDS Rahaq_3004 NC_015061.1 3253669 3254217 R TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: pct:PC1_2667 phosphatidylglycerophosphate synthetase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase complement(3253669..3254217) Rahnella sp. Y9602 10214018 YP_004213726.1 CDS Rahaq_3005 NC_015061.1 3254274 3256109 R TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; helix-hairpin-helix motif; KEGG: spe:Spro_1849 excinuclease ABC subunit C; SMART: Excinuclease ABC C subunit domain protein; Helix-hairpin-helix DNA-binding class 1; excinuclease ABC subunit C complement(3254274..3256109) Rahnella sp. Y9602 10214019 YP_004213727.1 CDS Rahaq_3006 NC_015061.1 3256102 3256758 R KEGG: spe:Spro_1848 response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; LuxR family transcriptional regulator complement(3256102..3256758) Rahnella sp. Y9602 10214020 YP_004213728.1 CDS Rahaq_3007 NC_015061.1 3257498 3257722 D PFAM: Protein of unknown function DUF2594; KEGG: spe:Spro_1847 hypothetical protein; hypothetical protein 3257498..3257722 Rahnella sp. Y9602 10214021 YP_004213729.1 CDS Rahaq_3008 NC_015061.1 3257832 3258005 D KEGG: pct:PC1_1414 hypothetical protein; hypothetical protein 3257832..3258005 Rahnella sp. Y9602 10214022 YP_004213730.1 CDS Rahaq_3009 NC_015061.1 3258009 3258767 D KEGG: spe:Spro_1876 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 3258009..3258767 Rahnella sp. Y9602 10214023 YP_004213731.1 CDS Rahaq_3010 NC_015061.1 3258754 3260424 R KEGG: spe:Spro_1875 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein; 2-isopropylmalate synthase complement(3258754..3260424) Rahnella sp. Y9602 10214024 YP_004213732.1 CDS Rahaq_3011 NC_015061.1 3260586 3261005 R KEGG: smt:Smal_1137 hypothetical protein; hypothetical protein complement(3260586..3261005) Rahnella sp. Y9602 10214025 YP_004213733.1 CDS Rahaq_3012 NC_015061.1 3261233 3261481 D hypothetical protein 3261233..3261481 Rahnella sp. Y9602 10214026 YP_004213734.1 CDS Rahaq_3013 NC_015061.1 3262184 3263584 D PFAM: amino acid permease-associated region; KEGG: spe:Spro_1825 D-alanine/D-serine/glycine permease; amino acid permease 3262184..3263584 Rahnella sp. Y9602 10214028 YP_004213735.1 CDS Rahaq_3014 NC_015061.1 3263866 3268719 D KEGG: phe:Phep_3637 hypothetical protein; hypothetical protein 3263866..3268719 Rahnella sp. Y9602 10214029 YP_004213736.1 CDS Rahaq_3015 NC_015061.1 3268850 3269839 R PFAM: membrane-bound metal-dependent hydrolase; KEGG: pam:PANA_1413 hypothetical protein; membrane-bound metal-dependent hydrolase complement(3268850..3269839) Rahnella sp. Y9602 10214030 YP_004213737.1 CDS Rahaq_3016 NC_015061.1 3269849 3270538 R PFAM: Tetracycline transcriptional regulator YcdC domain-containing protein; regulatory protein TetR; KEGG: pam:PANA_4032 YcdC; TetR family transcriptional regulator complement(3269849..3270538) Rahnella sp. Y9602 10214031 YP_004213738.1 CDS Rahaq_3017 NC_015061.1 3270950 3272041 D KEGG: pam:PANA_4033 YcdM; TIGRFAM: pyrimidine utilization protein A; PFAM: luciferase; pyrimidine utilization protein A 3270950..3272041 Rahnella sp. Y9602 10214032 YP_004213739.1 CDS Rahaq_3018 NC_015061.1 3272041 3272790 D KEGG: pam:PANA_4034 YcdL; TIGRFAM: pyrimidine utilization protein B; PFAM: isochorismatase hydrolase; pyrimidine utilization protein B 3272041..3272790 Rahnella sp. Y9602 10214033 YP_004213740.1 CDS Rahaq_3019 NC_015061.1 3272817 3273203 D KEGG: pam:PANA_4035 YcdK; TIGRFAM: pyrimidine utilization protein C; PFAM: Endoribonuclease L-PSP; pyrimidine utilization protein C 3272817..3273203 Rahnella sp. Y9602 10214034 YP_004213741.1 CDS Rahaq_3020 NC_015061.1 3273246 3274085 D KEGG: pam:PANA_4036 YcdJ; TIGRFAM: pyrimidine utilization protein D; PFAM: alpha/beta hydrolase fold; pyrimidine utilization protein D 3273246..3274085 Rahnella sp. Y9602 10214035 YP_004213742.1 CDS Rahaq_3021 NC_015061.1 3274070 3274660 D PFAM: nitroreductase; KEGG: pam:PANA_4037 YcdI; nitroreductase 3274070..3274660 Rahnella sp. Y9602 10214036 YP_004213743.1 CDS Rahaq_3022 NC_015061.1 3274691 3275260 D KEGG: pam:PANA_4038 YcdH; TIGRFAM: pyrimidine utilization flavin reductase protein F; PFAM: flavin reductase domain protein FMN-binding; pyrimidine utilization flavin reductase protein F 3274691..3275260 Rahnella sp. Y9602 10214037 YP_004213744.1 CDS Rahaq_3023 NC_015061.1 3275293 3276639 D KEGG: pam:PANA_4039 YcdG; TIGRFAM: pyrimidine utilization transport protein G; uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; pyrimidine utilization transport protein G 3275293..3276639 Rahnella sp. Y9602 10214038 YP_004213745.1 CDS Rahaq_3024 NC_015061.1 3276894 3278534 D PFAM: extracellular solute-binding protein family 5; KEGG: ebi:EbC_20610 ABC-type transporter, substrate binding protein; family 5 extracellular solute-binding protein 3276894..3278534 Rahnella sp. Y9602 10214039 YP_004213746.1 CDS Rahaq_3025 NC_015061.1 3278551 3279510 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3156 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3278551..3279510 Rahnella sp. Y9602 10214040 YP_004213747.1 CDS Rahaq_3026 NC_015061.1 3279507 3280370 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0073 ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 3279507..3280370 Rahnella sp. Y9602 10214041 YP_004213748.1 CDS Rahaq_3027 NC_015061.1 3280367 3281986 D KEGG: spe:Spro_3154 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3280367..3281986 Rahnella sp. Y9602 10214042 YP_004213749.1 CDS Rahaq_3028 NC_015061.1 3282014 3283075 D PFAM: luciferase; KEGG: spe:Spro_3153 luciferase family protein; luciferase 3282014..3283075 Rahnella sp. Y9602 10214043 YP_004213750.1 CDS Rahaq_3029 NC_015061.1 3283072 3284181 D KEGG: spe:Spro_3152 uncharacterized peroxidase-related enzyme; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; peroxidase-like protein 3283072..3284181 Rahnella sp. Y9602 10214044 YP_004213751.1 CDS Rahaq_3030 NC_015061.1 3284174 3285034 D KEGG: ebi:EbC_20540 conserved uncharacterized protein; hypothetical protein 3284174..3285034 Rahnella sp. Y9602 10214045 YP_004213752.1 CDS Rahaq_3031 NC_015061.1 3285336 3286838 D KEGG: yen:YE2762 ABC transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3285336..3286838 Rahnella sp. Y9602 10214046 YP_004213753.1 CDS Rahaq_3032 NC_015061.1 3286835 3287845 D PFAM: inner-membrane translocator; KEGG: spe:Spro_3219 monosaccharide-transporting ATPase; inner-membrane translocator 3286835..3287845 Rahnella sp. Y9602 10214047 YP_004213754.1 CDS Rahaq_3033 NC_015061.1 3288473 3289012 R PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_1455 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(3288473..3289012) Rahnella sp. Y9602 10214048 YP_004213755.1 CDS Rahaq_3034 NC_015061.1 3289037 3289606 R KEGG: ebi:EbC_13960 predicted transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(3289037..3289606) Rahnella sp. Y9602 10214049 YP_004213756.1 CDS Rahaq_3035 NC_015061.1 3289702 3290646 D KEGG: ebi:EbC_13950 HTH-type transcriptional regulator MlrA (MerR-like regulator A); PFAM: regulatory protein MerR; SMART: regulatory protein MerR; MerR family transcriptional regulator 3289702..3290646 Rahnella sp. Y9602 10214050 YP_004213757.1 CDS Rahaq_3036 NC_015061.1 3290639 3291091 D KEGG: eta:ETA_22320 transcriptional regulator; transcriptional regulator 3290639..3291091 Rahnella sp. Y9602 10214051 YP_004213758.1 CDS Rahaq_3037 NC_015061.1 3291091 3291807 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebi:EbC_13930 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 3291091..3291807 Rahnella sp. Y9602 10214052 YP_004213759.1 CDS Rahaq_3038 NC_015061.1 3291809 3293167 D PFAM: amine oxidase; KEGG: pct:PC1_2098 amine oxidase; amine oxidase 3291809..3293167 Rahnella sp. Y9602 10214053 YP_004213760.1 CDS Rahaq_3039 NC_015061.1 3293164 3293880 D PFAM: protein of unknown function DUF1365; KEGG: pct:PC1_2099 hypothetical protein; hypothetical protein 3293164..3293880 Rahnella sp. Y9602 10214054 YP_004213761.1 CDS Rahaq_3040 NC_015061.1 3293883 3295115 D KEGG: eca:ECA2212 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 3293883..3295115 Rahnella sp. Y9602 10214055 YP_004213762.1 CDS Rahaq_3041 NC_015061.1 3295112 3295612 D KEGG: ebi:EbC_13890 conserved uncharacterized protein; hypothetical protein 3295112..3295612 Rahnella sp. Y9602 10214056 YP_004213763.1 CDS Rahaq_3042 NC_015061.1 3295612 3296139 D KEGG: ebi:EbC_13880 conserved uncharacterized protein; hypothetical protein 3295612..3296139 Rahnella sp. Y9602 10214057 YP_004213764.1 CDS Rahaq_3043 NC_015061.1 3296160 3296696 D KEGG: ebi:EbC_13870 conserved uncharacterized protein; hypothetical protein 3296160..3296696 Rahnella sp. Y9602 10214058 YP_004213765.1 CDS Rahaq_3044 NC_015061.1 3296778 3297695 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: spe:Spro_1451 hypothetical protein; hypothetical protein complement(3296778..3297695) Rahnella sp. Y9602 10214059 YP_004213766.1 CDS Rahaq_3045 NC_015061.1 3297921 3298097 D KEGG: set:SEN2155 hypothetical protein; hypothetical protein 3297921..3298097 Rahnella sp. Y9602 10214060 YP_004213767.1 CDS Rahaq_3046 NC_015061.1 3298086 3298844 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_1448 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(3298086..3298844) Rahnella sp. Y9602 10214061 YP_004213768.1 CDS Rahaq_3047 NC_015061.1 3298841 3299785 R KEGG: yen:YE2863 ABC transport ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(3298841..3299785) Rahnella sp. Y9602 10214062 YP_004213769.1 CDS Rahaq_3048 NC_015061.1 3299782 3300951 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE2864 ABC transport integral membrane subunit; binding-protein-dependent transport system inner membrane protein complement(3299782..3300951) Rahnella sp. Y9602 10214063 YP_004213770.1 CDS Rahaq_3049 NC_015061.1 3301013 3301951 R PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: yen:YE2865 substrate-binding transport protein; glycine betaine ABC transporter substrate-binding protein complement(3301013..3301951) Rahnella sp. Y9602 10214064 YP_004213771.1 CDS Rahaq_3050 NC_015061.1 3302314 3303810 D PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_1443 major facilitator transporter; major facilitator superfamily protein 3302314..3303810 Rahnella sp. Y9602 10214065 YP_004213772.1 CDS Rahaq_3051 NC_015061.1 3303998 3305104 R KEGG: ypz:YPZ3_1088 hypothetical protein; hypothetical protein complement(3303998..3305104) Rahnella sp. Y9602 10214066 YP_004213773.1 CDS Rahaq_3052 NC_015061.1 3305246 3306142 R KEGG: ebi:EbC_37950 transcriptional regulator, LysR family; manually curated; PFAM: LysR substrate-binding; regulatory protein LysR; LysR family transcriptional regulator complement(3305246..3306142) Rahnella sp. Y9602 10214067 YP_004213774.1 CDS Rahaq_3053 NC_015061.1 3306344 3307660 D KEGG: ddd:Dda3937_02186 catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 3306344..3307660 Rahnella sp. Y9602 10214068 YP_004213775.1 CDS Rahaq_3054 NC_015061.1 3307660 3309126 D KEGG: spe:Spro_4201 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase dimerisation domain protein; peptidase M20; amidohydrolase 3307660..3309126 Rahnella sp. Y9602 10214069 YP_004213776.1 CDS Rahaq_3055 NC_015061.1 3309232 3310755 D PFAM: AbgT transporter; KEGG: ddd:Dda3937_00463 aminobenzoyl-glutamate transport protein; AbgT transporter 3309232..3310755 Rahnella sp. Y9602 10214070 YP_004213777.1 CDS Rahaq_3056 NC_015061.1 3310759 3311625 R PFAM: Protein of unknown function DUF2236; KEGG: ppw:PputW619_0730 hypothetical protein; hypothetical protein complement(3310759..3311625) Rahnella sp. Y9602 10214071 YP_004213778.1 CDS Rahaq_3057 NC_015061.1 3311643 3312302 R PFAM: regulatory protein TetR; KEGG: spe:Spro_1394 TetR family transcriptional regulator; TetR family transcriptional regulator complement(3311643..3312302) Rahnella sp. Y9602 10214072 YP_004213779.1 CDS Rahaq_3058 NC_015061.1 3312513 3312770 D KEGG: ebi:EbC_19800 outer membrane protein YcfR; hypothetical protein 3312513..3312770 Rahnella sp. Y9602 10214073 YP_004213780.1 CDS Rahaq_3059 NC_015061.1 3313187 3313444 D PFAM: protein of unknown function DUF1471; KEGG: ctu:Ctu_16920 multiple stress resistance protein BhsA; hypothetical protein 3313187..3313444 Rahnella sp. Y9602 10214074 YP_004213781.1 CDS Rahaq_3060 NC_015061.1 3313614 3313871 D PFAM: protein of unknown function DUF1471; KEGG: spe:Spro_1393 hypothetical protein; hypothetical protein 3313614..3313871 Rahnella sp. Y9602 10214075 YP_004213782.1 CDS Rahaq_3061 NC_015061.1 3314023 3314280 D PFAM: protein of unknown function DUF1471; KEGG: ctu:Ctu_16920 multiple stress resistance protein BhsA; hypothetical protein 3314023..3314280 Rahnella sp. Y9602 10214076 YP_004213783.1 CDS Rahaq_3062 NC_015061.1 3314528 3315742 D KEGG: ent:Ent638_3991 hypothetical protein; hypothetical protein 3314528..3315742 Rahnella sp. Y9602 10214077 YP_004213784.1 CDS Rahaq_3063 NC_015061.1 3315916 3316275 D PFAM: protein of unknown function DUF891; KEGG: spe:Spro_4386 hypothetical protein; hypothetical protein 3315916..3316275 Rahnella sp. Y9602 10214078 YP_004213785.1 CDS Rahaq_3064 NC_015061.1 3316256 3316597 D KEGG: spe:Spro_4385 hypothetical protein; hypothetical protein 3316256..3316597 Rahnella sp. Y9602 10214079 YP_004213786.1 CDS Rahaq_3065 NC_015061.1 3316666 3317763 R TIGRFAM: D-alanine/D-alanine ligase; KEGG: dda:Dd703_3243 D-alanine/D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; D-alanine--D-alanine ligase complement(3316666..3317763) Rahnella sp. Y9602 10214080 YP_004213787.1 CDS Rahaq_3066 NC_015061.1 3317822 3318151 R KEGG: pfl:PFL_2481 hypothetical protein; hypothetical protein complement(3317822..3318151) Rahnella sp. Y9602 10214081 YP_004213788.1 CDS Rahaq_3067 NC_015061.1 3318487 3319866 D PFAM: Aldehyde Dehydrogenase; KEGG: kpu:KP1_0725 aldehyde dehydrogenase; aldehyde dehydrogenase 3318487..3319866 Rahnella sp. Y9602 10214082 YP_004213789.1 CDS Rahaq_3068 NC_015061.1 3320016 3321137 D SMART: transcription factor jumonji jmjC domain-containing protein; KEGG: yen:YE3022 hypothetical protein; transcription factor jumonji jmjC domain-containing protein 3320016..3321137 Rahnella sp. Y9602 10214083 YP_004213790.1 CDS Rahaq_3069 NC_015061.1 3321218 3322141 R KEGG: spe:Spro_1413 phosphonate ABC transporter inner membrane subunit; TIGRFAM: phosphonate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; phosphonate ABC transporter inner membrane protein complement(3321218..3322141) Rahnella sp. Y9602 10214084 YP_004213791.1 CDS Rahaq_3070 NC_015061.1 3322141 3323004 R KEGG: ypb:YPTS_1313 phosphonate ABC transporter inner membrane subunit; TIGRFAM: phosphonate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; phosphonate ABC transporter inner membrane subunit complement(3322141..3323004) Rahnella sp. Y9602 10214085 YP_004213792.1 CDS Rahaq_3071 NC_015061.1 3323165 3324097 R TIGRFAM: phosphonate ABC transporter periplasmic phosphonate binding protein; phosphonate ABC transporter periplasmic phosphonate-binding protein; KEGG: ypb:YPTS_1312 phosphonate ABC transporter periplasmic phosphonate binding protein; phosphonate ABC transporter periplasmic protein complement(3323165..3324097) Rahnella sp. Y9602 10214086 YP_004213793.1 CDS Rahaq_3072 NC_015061.1 3324166 3325002 R TIGRFAM: phosphonate ABC transporter ATPase subunit; PFAM: ABC transporter related; KEGG: spe:Spro_1410 phosphonate ABC transporter ATPase subunit; SMART: AAA ATPase; phosphonate ABC transporter ATPase complement(3324166..3325002) Rahnella sp. Y9602 10214087 YP_004213794.1 CDS Rahaq_3073 NC_015061.1 3325209 3326900 D KEGG: spe:Spro_1364 D-lactate dehydrogenase; PFAM: D-lactate dehydrogenase membrane binding ; FAD linked oxidase domain protein; D-lactate dehydrogenase 3325209..3326900 Rahnella sp. Y9602 10214088 YP_004213795.1 CDS Rahaq_3074 NC_015061.1 3327040 3327630 R PFAM: protein of unknown function DUF1282; KEGG: spe:Spro_1363 hypothetical protein; hypothetical protein complement(3327040..3327630) Rahnella sp. Y9602 10214089 YP_004213796.1 CDS Rahaq_3075 NC_015061.1 3327808 3328467 R KEGG: afl:Aflv_2564 hypothetical protein; hypothetical protein complement(3327808..3328467) Rahnella sp. Y9602 10214090 YP_004213797.1 CDS Rahaq_3076 NC_015061.1 3328837 3329466 D KEGG: avi:Avi_9202 hypothetical protein; hypothetical protein 3328837..3329466 Rahnella sp. Y9602 10214091 YP_004213798.1 CDS Rahaq_3077 NC_015061.1 3329728 3330660 R PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: spe:Spro_1352 D-alanyl-D-alanine endopeptidase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 complement(3329728..3330660) Rahnella sp. Y9602 10214092 YP_004213799.1 CDS Rahaq_3078 NC_015061.1 3330894 3331826 R PFAM: dihydrouridine synthase DuS; KEGG: spe:Spro_1337 tRNA-dihydrouridine synthase C; dihydrouridine synthase DuS complement(3330894..3331826) Rahnella sp. Y9602 10214093 YP_004213800.1 CDS Rahaq_3079 NC_015061.1 3331885 3333330 R PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_1453 major facilitator transporter; major facilitator superfamily protein complement(3331885..3333330) Rahnella sp. Y9602 10214094 YP_004213801.1 CDS Rahaq_3080 NC_015061.1 3333452 3334099 D KEGG: xbo:XBJ1_4386 hypothetical protein; transcriptional regulator 3333452..3334099 Rahnella sp. Y9602 10214095 YP_004213802.1 CDS Rahaq_3081 NC_015061.1 3334166 3335578 R KEGG: spe:Spro_1331 ATP-dependent RNA helicase RhlE; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase complement(3334166..3335578) Rahnella sp. Y9602 10214096 YP_004213803.1 CDS Rahaq_3082 NC_015061.1 3335956 3337158 D PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_0813 major facilitator superfamily MFS_1; major facilitator superfamily protein 3335956..3337158 Rahnella sp. Y9602 10214097 YP_004213804.1 CDS Rahaq_3083 NC_015061.1 3337369 3338079 R PFAM: protein of unknown function UPF0005; KEGG: yen:YE2895 hypothetical protein; hypothetical protein complement(3337369..3338079) Rahnella sp. Y9602 10214098 YP_004213805.1 CDS Rahaq_3084 NC_015061.1 3338198 3338650 R PFAM: molybdopterin biosynthesis MoaE protein; KEGG: eic:NT01EI_2637 molybdopterin guanine dinucleotide biosynthesis protein MoaE; molybdopterin biosynthesis protein MoaE complement(3338198..3338650) Rahnella sp. Y9602 10214099 YP_004213806.1 CDS Rahaq_3085 NC_015061.1 3338652 3338897 R KEGG: seh:SeHA_C0931 molybdopterin synthase small subunit; TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; molybdopterin converting factor subunit 1 complement(3338652..3338897) Rahnella sp. Y9602 10214100 YP_004213807.1 CDS Rahaq_3086 NC_015061.1 3338894 3339385 R KEGG: kva:Kvar_3569 molybdenum cofactor biosynthesis protein C; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis protein MoaC; molybdenum cofactor biosynthesis protein C complement(3338894..3339385) Rahnella sp. Y9602 10214101 YP_004213808.1 CDS Rahaq_3087 NC_015061.1 3339388 3339900 R KEGG: spe:Spro_1321 molybdenum cofactor biosynthesis protein B; TIGRFAM: molybdenum cofactor biosynthesis protein B; molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; molybdenum cofactor biosynthesis protein B complement(3339388..3339900) Rahnella sp. Y9602 10214102 YP_004213809.1 CDS Rahaq_3088 NC_015061.1 3339932 3340984 R TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis domain protein; Radical SAM domain protein; KEGG: pct:PC1_1512 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A complement(3339932..3340984) Rahnella sp. Y9602 10214103 YP_004213810.1 CDS Rahaq_3089 NC_015061.1 3341328 3342236 D PFAM: protein of unknown function UPF0052 and CofD; KEGG: spe:Spro_1319 hypothetical protein; hypothetical protein 3341328..3342236 Rahnella sp. Y9602 10214104 YP_004213811.1 CDS Rahaq_3090 NC_015061.1 3342301 3342825 R PFAM: isochorismatase hydrolase; KEGG: yen:YE3592 isochorismatase family protein; isochorismatase hydrolase complement(3342301..3342825) Rahnella sp. Y9602 10214105 YP_004213812.1 CDS Rahaq_3091 NC_015061.1 3342866 3343234 R PFAM: Protein of unknown function DUF2132; KEGG: ebi:EbC_21020 hypothetical protein; hypothetical protein complement(3342866..3343234) Rahnella sp. Y9602 10214106 YP_004213813.1 CDS Rahaq_3092 NC_015061.1 3343301 3345307 R TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; KEGG: yen:YE2902 excinuclease ABC subunit B; SMART: DEAD-like helicase ; helicase domain protein; excinuclease ABC subunit B complement(3343301..3345307) Rahnella sp. Y9602 10214107 YP_004213814.1 CDS Rahaq_3093 NC_015061.1 3346464 3347174 D KEGG: spe:Spro_1316 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3346464..3347174 Rahnella sp. Y9602 10214108 YP_004213815.1 CDS Rahaq_3094 NC_015061.1 3347179 3347859 R TIGRFAM: dethiobiotin synthase; KEGG: pwa:Pecwa_2961 dithiobiotin synthetase; dethiobiotin synthase complement(3347179..3347859) Rahnella sp. Y9602 10214109 YP_004213816.1 CDS Rahaq_3095 NC_015061.1 3347995 3348786 R KEGG: ypy:YPK_2929 biotin biosynthesis protein BioC; TIGRFAM: biotin biosynthesis protein BioC; PFAM: methyltransferase type 11; biotin biosynthesis protein BioC complement(3347995..3348786) Rahnella sp. Y9602 10214110 YP_004213817.1 CDS Rahaq_3096 NC_015061.1 3348770 3349891 R TIGRFAM: 8-amino-7-oxononanoate synthase; KEGG: spe:Spro_1312 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; 8-amino-7-oxononanoate synthase complement(3348770..3349891) Rahnella sp. Y9602 10214111 YP_004213818.1 CDS Rahaq_3097 NC_015061.1 3349925 3350962 R SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: biotin synthase; KEGG: ddc:Dd586_2484 biotin synthase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; biotin synthase complement(3349925..3350962) Rahnella sp. Y9602 10214112 YP_004213819.1 CDS Rahaq_3098 NC_015061.1 3351091 3352368 D KEGG: spe:Spro_1310 adenosylmethionine--8-amino-7-oxononanoate transaminase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 3351091..3352368 Rahnella sp. Y9602 10214113 YP_004213820.1 CDS Rahaq_3099 NC_015061.1 3352369 3353322 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_1370 LysR family transcriptional regulator; LysR family transcriptional regulator complement(3352369..3353322) Rahnella sp. Y9602 10214114 YP_004213821.1 CDS Rahaq_3100 NC_015061.1 3353478 3354632 D PFAM: aminotransferase class I and II; KEGG: spe:Spro_1369 aminotransferase; class I and II aminotransferase 3353478..3354632 Rahnella sp. Y9602 10214115 YP_004213822.1 CDS Rahaq_3101 NC_015061.1 3354674 3355453 D KEGG: spe:Spro_1368 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 3354674..3355453 Rahnella sp. Y9602 10214116 YP_004213823.1 CDS Rahaq_3102 NC_015061.1 3355614 3356399 R TIGRFAM: HAD superfamily (subfamily IIIB) phosphatase, TIGR01672; KEGG: kpu:KP1_0297 acid phosphatase/phosphotransferase; PFAM: acid phosphatase (Class B); HAD superfamily phosphatase complement(3355614..3356399) Rahnella sp. Y9602 10214117 YP_004213824.1 CDS Rahaq_3103 NC_015061.1 3356599 3357636 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: pwa:Pecwa_0513 alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase 3356599..3357636 Rahnella sp. Y9602 10214118 YP_004213825.1 CDS Rahaq_3104 NC_015061.1 3357678 3358373 D PFAM: ThiJ/PfpI domain-containing protein; KEGG: pst:PSPTO_3545 ThiJ/PfpI family protein; ThiJ/PfpI domain-containing protein 3357678..3358373 Rahnella sp. Y9602 10214119 YP_004213826.1 CDS Rahaq_3105 NC_015061.1 3358411 3358893 D PFAM: PEBP family protein; KEGG: spe:Spro_1308 kinase inhibitor protein; PEBP family protein 3358411..3358893 Rahnella sp. Y9602 10214120 YP_004213827.1 CDS Rahaq_3106 NC_015061.1 3359015 3360295 D PFAM: Pectinesterase; KEGG: ddd:Dda3937_03435 pectinesterase; pectinesterase 3359015..3360295 Rahnella sp. Y9602 10214121 YP_004213828.1 CDS Rahaq_3107 NC_015061.1 3360377 3361888 R KEGG: ypz:YPZ3_3484 methyl-accepting chemotaxis protein II; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer complement(3360377..3361888) Rahnella sp. Y9602 10214122 YP_004213829.1 CDS Rahaq_3108 NC_015061.1 3362143 3363141 R KEGG: yen:YE2909 6-phosphogluconolactonase; 6-phosphogluconolactonase complement(3362143..3363141) Rahnella sp. Y9602 10214123 YP_004213830.1 CDS Rahaq_3109 NC_015061.1 3363312 3364133 D KEGG: spe:Spro_1306 phosphotransferase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase 3363312..3364133 Rahnella sp. Y9602 10214124 YP_004213831.1 CDS Rahaq_3110 NC_015061.1 3364189 3364458 R KEGG: xbo:XBJ1_4114 transcriptional activator of maltose metabolism (modular protein); Nlp family transcriptional regulator complement(3364189..3364458) Rahnella sp. Y9602 10214125 YP_004213832.1 CDS Rahaq_3111 NC_015061.1 3364603 3364866 D KEGG: spe:Spro_4126 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 3364603..3364866 Rahnella sp. Y9602 10214126 YP_004213833.1 CDS Rahaq_3112 NC_015061.1 3364879 3365940 R TIGRFAM: molybdate ABC transporter ATPase subunit; PFAM: ABC transporter related; TOBE domain-containing protein; KEGG: spe:Spro_1305 molybdate transporter ATP-binding protein; SMART: AAA ATPase; molybdate ABC transporter ATPase complement(3364879..3365940) Rahnella sp. Y9602 10214127 YP_004213834.1 CDS Rahaq_3113 NC_015061.1 3365942 3366631 R KEGG: yen:YE2912 molybdate ABC transporter permease protein; TIGRFAM: molybdate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; molybdate ABC transporter inner membrane subunit complement(3365942..3366631) Rahnella sp. Y9602 10214128 YP_004213835.1 CDS Rahaq_3114 NC_015061.1 3366809 3367582 R KEGG: spe:Spro_1303 molybdate transporter periplasmic protein; TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; molybdenum ABC transporter periplasmic molybdate-binding protein complement(3366809..3367582) Rahnella sp. Y9602 10214129 YP_004213836.1 CDS Rahaq_3115 NC_015061.1 3367778 3367933 R PFAM: Protein of unknown function DUF2592; KEGG: spe:Spro_1302 hypothetical protein; hypothetical protein complement(3367778..3367933) Rahnella sp. Y9602 10214130 YP_004213837.1 CDS Rahaq_3116 NC_015061.1 3368123 3368905 D KEGG: spe:Spro_1296 DNA-binding transcriptional regulator ModE; TIGRFAM: molybdate transport repressor, ModE; PFAM: TOBE domain-containing protein; regulatory protein LysR; ModE family transcriptional regulator 3368123..3368905 Rahnella sp. Y9602 10214131 YP_004213838.1 CDS Rahaq_3117 NC_015061.1 3369027 3370496 D KEGG: spe:Spro_1295 molybdenum transport ATP-binding protein ModF; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3369027..3370496 Rahnella sp. Y9602 10214132 YP_004213839.1 CDS Rahaq_3118 NC_015061.1 3370450 3371280 R KEGG: kse:Ksed_00880 sugar phosphate permease; hypothetical protein complement(3370450..3371280) Rahnella sp. Y9602 10214133 YP_004213840.1 CDS Rahaq_3119 NC_015061.1 3371419 3372366 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpn:KPN_02452 transcriptional regulator LysR; LysR family transcriptional regulator 3371419..3372366 Rahnella sp. Y9602 10214134 YP_004213841.1 CDS Rahaq_3120 NC_015061.1 3372567 3373583 D KEGG: yen:YE2917 UDP-galactose-4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucose 4-epimerase 3372567..3373583 Rahnella sp. Y9602 10214135 YP_004213842.1 CDS Rahaq_3121 NC_015061.1 3373603 3374652 D TIGRFAM: galactose-1-phosphate uridylyltransferase; KEGG: kpu:KP1_1716 galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein; galactose-1-phosphate uridylyltransferase 3373603..3374652 Rahnella sp. Y9602 10214136 YP_004213843.1 CDS Rahaq_3122 NC_015061.1 3374652 3375800 D KEGG: yen:YE2919 galactokinase; TIGRFAM: galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase domain protein; galactokinase 3374652..3375800 Rahnella sp. Y9602 10214137 YP_004213844.1 CDS Rahaq_3123 NC_015061.1 3375794 3376840 D TIGRFAM: galactose mutarotase; KEGG: spe:Spro_1290 galactose mutarotase; PFAM: Aldose 1-epimerase; galactose mutarotase 3375794..3376840 Rahnella sp. Y9602 10214138 YP_004213845.1 CDS Rahaq_3124 NC_015061.1 3376992 3377324 D PFAM: PsiF repeat-containing protein; KEGG: yen:YE2921 starvation-inducible protein; PsiF repeat-containing protein 3376992..3377324 Rahnella sp. Y9602 10214139 YP_004213846.1 CDS Rahaq_3125 NC_015061.1 3377532 3378284 D TIGRFAM: phosphoglycerate mutase 1 family; KEGG: yen:YE2924 phosphoglyceromutase; PFAM: Phosphoglycerate mutase; phosphoglycerate mutase 3377532..3378284 Rahnella sp. Y9602 10214140 YP_004213847.1 CDS Rahaq_3126 NC_015061.1 3378531 3379796 D PFAM: protein of unknown function DUF1479; KEGG: xbo:XBJ1_3889 hypothetical protein; hypothetical protein 3378531..3379796 Rahnella sp. Y9602 10214141 YP_004213848.1 CDS Rahaq_3127 NC_015061.1 3379890 3380042 R KEGG: kva:Kvar_2519 hypothetical protein; hypothetical protein complement(3379890..3380042) Rahnella sp. Y9602 10214142 YP_004213849.1 CDS Rahaq_3128 NC_015061.1 3380061 3380384 R KEGG: hse:Hsero_3621 hypothetical protein; hypothetical protein complement(3380061..3380384) Rahnella sp. Y9602 10214143 YP_004213850.1 CDS Rahaq_3129 NC_015061.1 3380522 3380995 D PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE4108 hypothetical protein; N-acetyltransferase GCN5 3380522..3380995 Rahnella sp. Y9602 10214144 YP_004213851.1 CDS Rahaq_3130 NC_015061.1 3381077 3382129 R TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: eum:ECUMN_0838 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase complement(3381077..3382129) Rahnella sp. Y9602 10214145 YP_004213852.1 CDS Rahaq_3131 NC_015061.1 3382333 3382662 D KEGG: ses:SARI_02177 hypothetical protein; hypothetical protein 3382333..3382662 Rahnella sp. Y9602 10214146 YP_004213853.1 CDS Rahaq_3132 NC_015061.1 3382789 3383742 D KEGG: spe:Spro_1284 zinc transporter ZitB; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter 3382789..3383742 Rahnella sp. Y9602 10214147 YP_004213854.1 CDS Rahaq_3133 NC_015061.1 3383811 3384536 R KEGG: yen:YE2927 intergral membrane NMN transport protein PnuC; TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC complement(3383811..3384536) Rahnella sp. Y9602 10214148 YP_004213855.1 CDS Rahaq_3134 NC_015061.1 3384592 3385656 R TIGRFAM: quinolinate synthetase complex, A subunit; KEGG: spe:Spro_1282 quinolinate synthetase; PFAM: Quinolinate synthetase A; quinolinate synthetase complex subunit A complement(3384592..3385656) Rahnella sp. Y9602 10214149 YP_004213856.1 CDS Rahaq_3135 NC_015061.1 3386632 3387423 R TIGRFAM: tol-pal system protein YbgF; KEGG: yen:YE2930 tol-pal system protein YbgF; tol-pal system protein YbgF complement(3386632..3387423) Rahnella sp. Y9602 10214153 YP_004213857.1 CDS Rahaq_3136 NC_015061.1 3387433 3387945 R KEGG: ebi:EbC_13110 peptidoglycan-associated lipoprotein Pal, OmpA family of porins; TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; peptidoglycan-associated lipoprotein complement(3387433..3387945) Rahnella sp. Y9602 10214154 YP_004213858.1 CDS Rahaq_3137 NC_015061.1 3387994 3389286 R KEGG: yen:YE2932 translocation protein TolB; TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: TolB domain-containing protein; WD40-like beta Propeller containing protein; Tol-Pal system beta propeller repeat-containing protein TolB complement(3387994..3389286) Rahnella sp. Y9602 10214155 YP_004213859.1 CDS Rahaq_3138 NC_015061.1 3389416 3390627 R KEGG: ddc:Dd586_1199 protein TolA; TIGRFAM: protein TolA; TonB family protein; PFAM: Tol-Pal system TolA; protein TolA complement(3389416..3390627) Rahnella sp. Y9602 10214156 YP_004213860.1 CDS Rahaq_3139 NC_015061.1 3390741 3391172 R KEGG: ebi:EbC_13080 biopolymer transport portein TolR, probable fragment; TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; protein TolR complement(3390741..3391172) Rahnella sp. Y9602 10214157 YP_004213861.1 CDS Rahaq_3140 NC_015061.1 3391184 3391873 R KEGG: ctu:Ctu_13440 colicin uptake protein TolQ; TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; protein TolQ complement(3391184..3391873) Rahnella sp. Y9602 10214158 YP_004213862.1 CDS Rahaq_3141 NC_015061.1 3391870 3392274 R manually curated; TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; KEGG: yen:YE2936 acyl-CoA thioester hydrolase YbgC; PFAM: thioesterase superfamily protein; tol-pal system-associated acyl-CoA thioesterase complement(3391870..3392274) Rahnella sp. Y9602 10214159 YP_004213863.1 CDS Rahaq_3142 NC_015061.1 3392424 3392717 R KEGG: pct:PC1_1244 hypothetical protein; TIGRFAM: cyd operon protein YbgE; PFAM: Cyd operon protein YbgE; cyd operon protein YbgE complement(3392424..3392717) Rahnella sp. Y9602 10214160 YP_004213864.1 CDS Rahaq_3143 NC_015061.1 3392720 3392833 R KEGG: kva:Kvar_3632 cyd operon protein YbgT; TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; cyd operon protein YbgT complement(3392720..3392833) Rahnella sp. Y9602 10214161 YP_004213865.1 CDS Rahaq_3144 NC_015061.1 3392844 3393983 R KEGG: yen:YE2938 cytochrome d ubiquinol oxidase subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase, subunit II complement(3392844..3393983) Rahnella sp. Y9602 10214162 YP_004213866.1 CDS Rahaq_3145 NC_015061.1 3393998 3395566 R PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: spe:Spro_1271 cytochrome bd ubiquinol oxidase subunit I; cytochrome bd ubiquinol oxidase subunit I complement(3393998..3395566) Rahnella sp. Y9602 10214163 YP_004213867.1 CDS Rahaq_3146 NC_015061.1 3396289 3397161 R KEGG: ypb:YPTS_1227 succinyl-CoA synthetase subunit alpha; TIGRFAM: succinyl-CoA synthetase, subunit alpha; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding domain protein; succinyl-CoA synthetase subunit alpha complement(3396289..3397161) Rahnella sp. Y9602 10214164 YP_004213868.1 CDS Rahaq_3147 NC_015061.1 3397161 3398327 R TIGRFAM: succinyl-CoA synthetase, subunit beta; KEGG: cko:CKO_02431 succinyl-CoA synthetase subunit beta; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase; succinyl-CoA synthetase subunit beta complement(3397161..3398327) Rahnella sp. Y9602 10214165 YP_004213869.1 CDS Rahaq_3148 NC_015061.1 3398420 3399649 R KEGG: ddd:Dda3937_01534 dihydrolipoyltranssuccinase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase complement(3398420..3399649) Rahnella sp. Y9602 10214166 YP_004213870.1 CDS Rahaq_3149 NC_015061.1 3399696 3402503 R TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; KEGG: spe:Spro_1267 2-oxoglutarate dehydrogenase E1 component; PFAM: Transketolase central region; dehydrogenase E1 component; 2-oxoglutarate dehydrogenase E1 complement(3399696..3402503) Rahnella sp. Y9602 10214167 YP_004213871.1 CDS Rahaq_3150 NC_015061.1 3402904 3403620 R KEGG: dze:Dd1591_2915 succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; succinate dehydrogenase and fumarate reductase iron-sulfur protein complement(3402904..3403620) Rahnella sp. Y9602 10214168 YP_004213872.1 CDS Rahaq_3151 NC_015061.1 3403640 3405406 R KEGG: ddc:Dd586_1185 succinate dehydrogenase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; succinate dehydrogenase flavoprotein subunit complement(3403640..3405406) Rahnella sp. Y9602 10214169 YP_004213873.1 CDS Rahaq_3152 NC_015061.1 3405410 3405757 R TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; KEGG: spe:Spro_1264 succinate dehydrogenase cytochrome b556 small membrane subunit; succinate dehydrogenase complement(3405410..3405757) Rahnella sp. Y9602 10214170 YP_004213874.1 CDS Rahaq_3153 NC_015061.1 3405751 3406140 R KEGG: spe:Spro_1263 succinate dehydrogenase cytochrome b556 large membrane subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; succinate dehydrogenase, cytochrome b556 subunit complement(3405751..3406140) Rahnella sp. Y9602 10214171 YP_004213875.1 CDS Rahaq_3154 NC_015061.1 3406968 3408251 D KEGG: enc:ECL_03012 citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; citrate synthase I 3406968..3408251 Rahnella sp. Y9602 10214172 YP_004213876.1 CDS Rahaq_3155 NC_015061.1 3408537 3411488 D KEGG: yen:YE4059 autotransporter protein; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; Pertactin; outer membrane autotransporter barrel domain-containing protein 3408537..3411488 Rahnella sp. Y9602 10214173 YP_004213877.1 CDS Rahaq_3156 NC_015061.1 3411540 3412334 R KEGG: spe:Spro_1261 endonuclease VIII; PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA-(apurinic or apyrimidinic site) lyase complement(3411540..3412334) Rahnella sp. Y9602 10214174 YP_004213878.1 CDS Rahaq_3157 NC_015061.1 3412334 3412984 R TIGRFAM: pyrrolidone-carboxylate peptidase; KEGG: spe:Spro_1260 pyrrolidone-carboxylate peptidase; PFAM: peptidase C15 pyroglutamyl peptidase I; pyrrolidone-carboxylate peptidase complement(3412334..3412984) Rahnella sp. Y9602 10214175 YP_004213879.1 CDS Rahaq_3158 NC_015061.1 3413012 3413749 R PFAM: LamB/YcsF family protein; KEGG: yen:YE2953 LamB/YcsF family protein; LamB/YcsF family protein complement(3413012..3413749) Rahnella sp. Y9602 10214176 YP_004213880.1 CDS Rahaq_3159 NC_015061.1 3413739 3414668 R SMART: Allophanate hydrolase subunit 2; TIGRFAM: urea amidolyase related protein; KEGG: spe:Spro_1256 UreA amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; urea amidolyase complement(3413739..3414668) Rahnella sp. Y9602 10214177 YP_004213881.1 CDS Rahaq_3160 NC_015061.1 3414662 3415327 R KEGG: yen:YE2955A hypothetical protein; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; allophanate hydrolase subunit 1 complement(3414662..3415327) Rahnella sp. Y9602 10214178 YP_004213882.1 CDS Rahaq_3161 NC_015061.1 3415552 3416982 D PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_0839 major facilitator transporter; major facilitator superfamily protein 3415552..3416982 Rahnella sp. Y9602 10214179 YP_004213883.1 CDS Rahaq_3162 NC_015061.1 3416979 3417722 R PFAM: protein of unknown function DUF34; KEGG: yen:YE2955 hydrolase-oxidase; hypothetical protein complement(3416979..3417722) Rahnella sp. Y9602 10214180 YP_004213884.1 CDS Rahaq_3163 NC_015061.1 3417749 3418732 R KEGG: spe:Spro_1253 cyclic-AMP phosphodiesterase; PFAM: cyclic-AMP phosphodiesterase class-II; cyclic-AMP phosphodiesterase complement(3417749..3418732) Rahnella sp. Y9602 10214181 YP_004213885.1 CDS Rahaq_3164 NC_015061.1 3418766 3420196 R KEGG: spe:Spro_1252 deoxyribodipyrimidine photolyase; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; deoxyribodipyrimidine photo-lyase complement(3418766..3420196) Rahnella sp. Y9602 10214182 YP_004213886.1 CDS Rahaq_3165 NC_015061.1 3420218 3421171 R PFAM: protein of unknown function DUF523; protein of unknown function DUF1722; KEGG: spe:Spro_1251 hypothetical protein; hypothetical protein complement(3420218..3421171) Rahnella sp. Y9602 10214183 YP_004213887.1 CDS Rahaq_3166 NC_015061.1 3421354 3421560 R PFAM: Protein of unknown function DUF2517; KEGG: spe:Spro_1250 hypothetical protein; hypothetical protein complement(3421354..3421560) Rahnella sp. Y9602 10214184 YP_004213888.1 CDS Rahaq_3167 NC_015061.1 3422060 3423748 D TIGRFAM: potassium-transporting ATPase, A subunit; KEGG: ypi:YpsIP31758_1108 potassium-transporting ATPase subunit A; PFAM: K transporting ATPase A subunit; potassium-transporting ATPase subunit A 3422060..3423748 Rahnella sp. Y9602 10214185 YP_004213889.1 CDS Rahaq_3168 NC_015061.1 3423792 3425858 D KEGG: yen:YE2961 potassium-transporting ATPase subunit B; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; K+-transporting ATPase subunit B 3423792..3425858 Rahnella sp. Y9602 10214186 YP_004213890.1 CDS Rahaq_3169 NC_015061.1 3425877 3426470 D TIGRFAM: potassium-transporting ATPase, C subunit; KEGG: ebi:EbC_43380 potassium-transporting ATPase, C chain; PFAM: K transporting ATPase KdpC subunit; potassium-transporting ATPase subunit C 3425877..3426470 Rahnella sp. Y9602 10214187 YP_004213891.1 CDS Rahaq_3170 NC_015061.1 3426489 3429185 D KEGG: spe:Spro_1245 sensor protein KdpD; PFAM: Osmosensitive K channel His kinase sensor; UspA domain-containing protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; osmosensitive K channel His kinase sensor 3426489..3429185 Rahnella sp. Y9602 10214188 YP_004213892.1 CDS Rahaq_3171 NC_015061.1 3429182 3429871 D KEGG: spe:Spro_1244 DNA-binding transcriptional activator KdpE; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator 3429182..3429871 Rahnella sp. Y9602 10214189 YP_004213893.1 CDS Rahaq_3172 NC_015061.1 3429861 3430577 R PFAM: transcriptional regulator PadR family protein; KEGG: ypb:YPTS_3230 PadR-like family transcriptional regulator; PadR family transcriptional regulator complement(3429861..3430577) Rahnella sp. Y9602 10214190 YP_004213894.1 CDS Rahaq_3173 NC_015061.1 3430760 3432403 R KEGG: spe:Spro_1241 phosphoglucomutase; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucomutase, alpha-D-glucose phosphate-specific complement(3430760..3432403) Rahnella sp. Y9602 10214191 YP_004213895.1 CDS Rahaq_3174 NC_015061.1 3432428 3432979 R PFAM: SeqA family protein; KEGG: eca:ECA1335 replication initiation regulator SeqA; SeqA family protein complement(3432428..3432979) Rahnella sp. Y9602 10214192 YP_004213896.1 CDS Rahaq_3175 NC_015061.1 3433203 3434003 D PFAM: alpha/beta hydrolase fold; KEGG: spe:Spro_1239 alpha/beta hydrolase fold; alpha/beta hydrolase 3433203..3434003 Rahnella sp. Y9602 10214193 YP_004213897.1 CDS Rahaq_3176 NC_015061.1 3434220 3434546 D KEGG: spe:Spro_1238 LexA regulated protein; LexA family transcriptional regulator 3434220..3434546 Rahnella sp. Y9602 10214194 YP_004213898.1 CDS Rahaq_3177 NC_015061.1 3434623 3436287 R KEGG: yen:YE2971 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(3434623..3436287) Rahnella sp. Y9602 10214195 YP_004213899.1 CDS Rahaq_3178 NC_015061.1 3436709 3437236 D KEGG: ypb:YPTS_1183 flavodoxin FldA; TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; flavodoxin 3436709..3437236 Rahnella sp. Y9602 10214196 YP_004213900.1 CDS Rahaq_3179 NC_015061.1 3437549 3438004 D PFAM: ferric-uptake regulator; KEGG: ddd:Dda3937_01561 DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport; ferric uptake regulator family protein 3437549..3438004 Rahnella sp. Y9602 10214197 YP_004213901.1 CDS Rahaq_3180 NC_015061.1 3438133 3438474 R KEGG: spe:Spro_1231 lipoprotein; lipoprotein complement(3438133..3438474) Rahnella sp. Y9602 10214198 YP_004213902.1 CDS Rahaq_3181 NC_015061.1 3438482 3439903 R PFAM: outer membrane porin; KEGG: spe:Spro_1230 outer membrane porin; outer membrane porin complement(3438482..3439903) Rahnella sp. Y9602 10214199 YP_004213903.1 CDS Rahaq_3182 NC_015061.1 3440331 3442001 R KEGG: spe:Spro_1229 glutaminyl-tRNA synthetase; TIGRFAM: glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; glutaminyl-tRNA synthetase complement(3440331..3442001) Rahnella sp. Y9602 10214200 YP_004213904.1 CDS Rahaq_3183 NC_015061.1 3442194 3444233 R TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PTS system, glucose subfamily, IIA subunit; KEGG: yen:YE2978 PTS system, N-acetylglucosamine-specific IIABC component; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; sugar-specific permease EIIA 1 domain; PTS system N-acetylglucosamine-specific transporter subunit IIBC complement(3442194..3444233) Rahnella sp. Y9602 10214201 YP_004213905.1 CDS Rahaq_3184 NC_015061.1 3444616 3445416 D KEGG: ebi:EbC_12700 glucosamine-6-phosphate deaminase; TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; glucosamine-6-phosphate isomerase 3444616..3445416 Rahnella sp. Y9602 10214202 YP_004213906.1 CDS Rahaq_3185 NC_015061.1 3445566 3446705 D TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: yen:YE2980 N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; N-acetylglucosamine-6-phosphate deacetylase 3445566..3446705 Rahnella sp. Y9602 10214203 YP_004213907.1 CDS Rahaq_3186 NC_015061.1 3446726 3447949 D PFAM: ROK family protein; regulatory protein MarR; KEGG: spe:Spro_1225 ROK family protein; ROK family protein 3446726..3447949 Rahnella sp. Y9602 10214204 YP_004213908.1 CDS Rahaq_3187 NC_015061.1 3447992 3448759 D KEGG: spe:Spro_1224 UMP phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 3447992..3448759 Rahnella sp. Y9602 10214205 YP_004213909.1 CDS Rahaq_3188 NC_015061.1 3449120 3450784 D KEGG: ddc:Dd586_1156 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II; asparagine synthase 3449120..3450784 Rahnella sp. Y9602 10214206 YP_004213910.1 CDS Rahaq_3189 NC_015061.1 3451820 3453004 R KEGG: spe:Spro_1221 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: FAD dependent oxidoreductase; UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase complement(3451820..3453004) Rahnella sp. Y9602 10214213 YP_004213911.1 CDS Rahaq_3190 NC_015061.1 3453192 3454616 D TIGRFAM: tRNA-i(6)A37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004 ; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; KEGG: spe:Spro_1220 tRNA-i(6)A37 thiotransferase enzyme MiaB; SMART: Elongator protein 3/MiaB/NifB; tRNA-i(6)A37 thiotransferase enzyme MiaB 3453192..3454616 Rahnella sp. Y9602 10214214 YP_004213912.1 CDS Rahaq_3191 NC_015061.1 3454880 3455938 D PFAM: PhoH family protein; KEGG: spe:Spro_1218 PhoH family protein; PhoH family protein 3454880..3455938 Rahnella sp. Y9602 10214215 YP_004213913.1 CDS Rahaq_3192 NC_015061.1 3455935 3456408 D PFAM: protein of unknown function UPF0054; KEGG: yen:YE2987 metalloprotease; hypothetical protein 3455935..3456408 Rahnella sp. Y9602 10214216 YP_004213914.1 CDS Rahaq_3193 NC_015061.1 3456508 3457386 D PFAM: CBS domain containing protein; transporter-associated region; KEGG: yen:YE2988 hypothetical protein; hypothetical protein 3456508..3457386 Rahnella sp. Y9602 10214217 YP_004213915.1 CDS Rahaq_3194 NC_015061.1 3457394 3458923 D KEGG: spe:Spro_1215 apolipoprotein N-acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 3457394..3458923 Rahnella sp. Y9602 10214218 YP_004213916.1 CDS Rahaq_3195 NC_015061.1 3459361 3460257 D KEGG: spe:Spro_1214 glutamate and aspartate transporter subunit; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 3459361..3460257 Rahnella sp. Y9602 10214219 YP_004213917.1 CDS Rahaq_3196 NC_015061.1 3460447 3461187 D KEGG: kva:Kvar_3686 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 3460447..3461187 Rahnella sp. Y9602 10214220 YP_004213918.1 CDS Rahaq_3197 NC_015061.1 3461190 3461867 D KEGG: enc:ECL_03050 glutamate/aspartate transport system permease protein; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 3461190..3461867 Rahnella sp. Y9602 10214221 YP_004213919.1 CDS Rahaq_3198 NC_015061.1 3461864 3462589 D KEGG: spe:Spro_1211 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3461864..3462589 Rahnella sp. Y9602 10214222 YP_004213920.1 CDS Rahaq_3199 NC_015061.1 3462649 3463149 R PFAM: protein of unknown function DUF1451; KEGG: ent:Ent638_1177 hypothetical protein; hypothetical protein complement(3462649..3463149) Rahnella sp. Y9602 10214223 YP_004213921.1 CDS Rahaq_3200 NC_015061.1 3463417 3466101 D KEGG: spe:Spro_1207 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; leucyl-tRNA synthetase 3463417..3466101 Rahnella sp. Y9602 10214224 YP_004213922.1 CDS Rahaq_3201 NC_015061.1 3466116 3466748 D PFAM: Rare lipoprotein B; KEGG: spe:Spro_1206 LPS-assembly lipoprotein RlpB; Rare lipoprotein B 3466116..3466748 Rahnella sp. Y9602 10214225 YP_004213923.1 CDS Rahaq_3202 NC_015061.1 3466745 3467785 D TIGRFAM: DNA polymerase III, subunit delta; KEGG: spe:Spro_1205 DNA polymerase III subunit delta; PFAM: DNA polymerase III delta; DNA polymerase III subunit delta 3466745..3467785 Rahnella sp. Y9602 10214226 YP_004213924.1 CDS Rahaq_3203 NC_015061.1 3467800 3468477 D TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; KEGG: spe:Spro_1204 nicotinic acid mononucleotide adenylyltransferase; PFAM: cytidylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase 3467800..3468477 Rahnella sp. Y9602 10214227 YP_004213925.1 CDS Rahaq_3204 NC_015061.1 3468684 3469001 D KEGG: dda:Dd703_1094 hypothetical protein; TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; iojap family protein 3468684..3469001 Rahnella sp. Y9602 10214228 YP_004213926.1 CDS Rahaq_3205 NC_015061.1 3469005 3469475 D PFAM: protein of unknown function DUF163; KEGG: spe:Spro_1202 hypothetical protein; hypothetical protein 3469005..3469475 Rahnella sp. Y9602 10214229 YP_004213927.1 CDS Rahaq_3206 NC_015061.1 3469514 3471418 D TIGRFAM: penicillin-binding protein 2; KEGG: spe:Spro_1201 penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; penicillin-binding protein 2 3469514..3471418 Rahnella sp. Y9602 10214230 YP_004213928.1 CDS Rahaq_3207 NC_015061.1 3471425 3472537 D manually curated; TIGRFAM: rod shape-determining protein RodA; KEGG: yen:YE3003 cell wall shape-determining protein; PFAM: cell cycle protein; rod shape-determining protein RodA 3471425..3472537 Rahnella sp. Y9602 10214231 YP_004213929.1 CDS Rahaq_3208 NC_015061.1 3472547 3473698 D KEGG: spe:Spro_1199 rare lipoprotein A; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain-containing protein; rare lipoprotein A 3472547..3473698 Rahnella sp. Y9602 10214232 YP_004213930.1 CDS Rahaq_3209 NC_015061.1 3473855 3475063 D KEGG: spe:Spro_1198 D-alanyl-D-alanine carboxypeptidase fraction A; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; Beta-lactamase 3473855..3475063 Rahnella sp. Y9602 10214233 YP_004213931.1 CDS Rahaq_3210 NC_015061.1 3475189 3475452 D PFAM: protein of unknown function DUF493; KEGG: spe:Spro_1197 hypothetical protein; hypothetical protein 3475189..3475452 Rahnella sp. Y9602 10214234 YP_004213932.1 CDS Rahaq_3211 NC_015061.1 3475510 3476208 D TIGRFAM: lipoate-protein ligase B; KEGG: ypb:YPTS_1149 lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; lipoate-protein ligase B 3475510..3476208 Rahnella sp. Y9602 10214235 YP_004213933.1 CDS Rahaq_3212 NC_015061.1 3476324 3476425 R hypothetical protein complement(3476324..3476425) Rahnella sp. Y9602 10214236 YP_004213934.1 CDS Rahaq_3213 NC_015061.1 3476580 3477545 D SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: lipoic acid synthetase; KEGG: spe:Spro_1195 lipoyl synthase; PFAM: Radical SAM domain protein; lipoic acid synthetase 3476580..3477545 Rahnella sp. Y9602 10214237 YP_004213935.1 CDS Rahaq_3214 NC_015061.1 3477643 3477849 R KEGG: pam:PANA_1117 TatE; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; twin-arginine translocation protein, TatA/E family subunit complement(3477643..3477849) Rahnella sp. Y9602 10214238 YP_004213936.1 CDS Rahaq_3215 NC_015061.1 3478065 3478862 R KEGG: dda:Dd703_0390 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(3478065..3478862) Rahnella sp. Y9602 10214239 YP_004213937.1 CDS Rahaq_3216 NC_015061.1 3478859 3479842 R KEGG: ebi:EbC_12390 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit complement(3478859..3479842) Rahnella sp. Y9602 10214240 YP_004213938.1 CDS Rahaq_3217 NC_015061.1 3479839 3480747 R KEGG: ebi:EbC_12380 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein complement(3479839..3480747) Rahnella sp. Y9602 10214241 YP_004213939.1 CDS Rahaq_3218 NC_015061.1 3480947 3481741 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ebi:EbC_12370 hydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(3480947..3481741) Rahnella sp. Y9602 10214242 YP_004213940.1 CDS Rahaq_3219 NC_015061.1 3481788 3482846 R KEGG: dda:Dd703_0386 hypothetical protein; hypothetical protein complement(3481788..3482846) Rahnella sp. Y9602 10214243 YP_004213941.1 CDS Rahaq_3220 NC_015061.1 3482955 3484301 D KEGG: dda:Dd703_0385 transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 3482955..3484301 Rahnella sp. Y9602 10214244 YP_004213942.1 CDS Rahaq_3221 NC_015061.1 3484306 3484728 R PFAM: GCN5-related N-acetyltransferase; KEGG: esa:ESA_01926 hypothetical protein; N-acetyltransferase GCN5 complement(3484306..3484728) Rahnella sp. Y9602 10214245 YP_004213943.1 CDS Rahaq_3222 NC_015061.1 3484941 3485324 D KEGG: yen:YE3011 camphor resistance protein CrcB; TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; CrcB protein 3484941..3485324 Rahnella sp. Y9602 10214246 YP_004213944.1 CDS Rahaq_3223 NC_015061.1 3485784 3486440 D PFAM: regulatory protein TetR; KEGG: spe:Spro_1191 TetR family transcriptional regulator; TetR family transcriptional regulator 3485784..3486440 Rahnella sp. Y9602 10214247 YP_004213945.1 CDS Rahaq_3224 NC_015061.1 3486450 3487637 D KEGG: spe:Spro_1190 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; Bcr/CflA subfamily drug resistance transporter 3486450..3487637 Rahnella sp. Y9602 10214248 YP_004213946.1 CDS Rahaq_3225 NC_015061.1 3487703 3487912 R KEGG: ypb:YPTS_1144 cold shock protein CspE; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock protein complement(3487703..3487912) Rahnella sp. Y9602 10214249 YP_004213947.1 CDS Rahaq_3226 NC_015061.1 3488090 3488833 R PFAM: Protein of unknown function DUF2076; KEGG: spe:Spro_1006 periplasmic ligand-binding sensor protein; periplasmic ligand-binding sensor protein complement(3488090..3488833) Rahnella sp. Y9602 10214250 YP_004213948.1 CDS Rahaq_3227 NC_015061.1 3489030 3490160 R PFAM: periplasmic binding protein; KEGG: pwa:Pecwa_1240 periplasmic binding protein; periplasmic binding protein complement(3489030..3490160) Rahnella sp. Y9602 10214251 YP_004213949.1 CDS Rahaq_3228 NC_015061.1 3490352 3492451 R KEGG: spe:Spro_2232 prolyl oligopeptidase; PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; prolyl oligopeptidase complement(3490352..3492451) Rahnella sp. Y9602 10214252 YP_004213950.1 CDS Rahaq_3229 NC_015061.1 3492568 3493581 R PFAM: Ppx/GppA phosphatase; KEGG: bba:Bd1525 hypothetical protein; Ppx/GppA phosphatase complement(3492568..3493581) Rahnella sp. Y9602 10214253 YP_004213951.1 CDS Rahaq_3230 NC_015061.1 3493893 3494138 D KEGG: kva:Kvar_4794 hypothetical protein; hypothetical protein 3493893..3494138 Rahnella sp. Y9602 10214254 YP_004213952.1 CDS Rahaq_3231 NC_015061.1 3494178 3494699 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: esa:ESA_00093 hypothetical protein; cupin complement(3494178..3494699) Rahnella sp. Y9602 10214255 YP_004213953.1 CDS Rahaq_3232 NC_015061.1 3494733 3495086 R KEGG: asa:ASA_1021 hypothetical protein; hypothetical protein complement(3494733..3495086) Rahnella sp. Y9602 10214256 YP_004213954.1 CDS Rahaq_3233 NC_015061.1 3495115 3496191 R TIGRFAM: diguanylate cyclase; PFAM: MASE2 domain protein; GGDEF domain containing protein; KEGG: dda:Dd703_1224 diguanylate cyclase; SMART: GGDEF domain containing protein; diguanylate cyclase complement(3495115..3496191) Rahnella sp. Y9602 10214257 YP_004213955.1 CDS Rahaq_3234 NC_015061.1 3496466 3496873 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: pct:PC1_2917 cupin 2 conserved barrel domain protein; cupin complement(3496466..3496873) Rahnella sp. Y9602 10214258 YP_004213956.1 CDS Rahaq_3235 NC_015061.1 3497214 3497768 R KEGG: amu:Amuc_0384 maltose O-acetyltransferase; maltose O-acetyltransferase complement(3497214..3497768) Rahnella sp. Y9602 10214259 YP_004213957.1 CDS Rahaq_3236 NC_015061.1 3497817 3499232 R TIGRFAM: sugar transporter; KEGG: set:SEN2859 arabinose-proton symporter; sugar transporter complement(3497817..3499232) Rahnella sp. Y9602 10214260 YP_004213958.1 CDS Rahaq_3237 NC_015061.1 3499759 3500088 D KEGG: pwa:Pecwa_0482 hypothetical protein; hypothetical protein 3499759..3500088 Rahnella sp. Y9602 10214261 YP_004213959.1 CDS Rahaq_3238 NC_015061.1 3500261 3500974 D PFAM: Conserved hypothetical protein CHP02453; KEGG: shw:Sputw3181_2796 hypothetical protein; hypothetical protein 3500261..3500974 Rahnella sp. Y9602 10214262 YP_004213960.1 CDS Rahaq_3239 NC_015061.1 3501217 3501414 R KEGG: ent:Ent638_4271 hypothetical protein; hypothetical protein complement(3501217..3501414) Rahnella sp. Y9602 10214263 YP_004213961.1 CDS Rahaq_3240 NC_015061.1 3501714 3502496 R KEGG: ebi:EbC_03910 conserved uncharacterized protein; hypothetical protein complement(3501714..3502496) Rahnella sp. Y9602 10214264 YP_004213962.1 CDS Rahaq_3241 NC_015061.1 3502836 3507392 D KEGG: avn:Avin_12280 hypothetical protein; TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; filamentous hemagglutinin family outer membrane protein 3502836..3507392 Rahnella sp. Y9602 10214265 YP_004213963.1 CDS Rahaq_3242 NC_015061.1 3507396 3509054 D PFAM: Polypeptide-transport-associated domain protein ShlB-type; KEGG: avn:Avin_12270 hypothetical protein; Polypeptide-transport-associated domain protein ShlB-type 3507396..3509054 Rahnella sp. Y9602 10214266 YP_004213964.1 CDS Rahaq_3243 NC_015061.1 3509591 3510238 D KEGG: pam:PANA_2511 hypothetical protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; phosphoesterase PA-phosphatase-like protein 3509591..3510238 Rahnella sp. Y9602 10214267 YP_004213965.1 CDS Rahaq_3244 NC_015061.1 3510599 3511510 R KEGG: lsg:lse_1635 lactate/malate dehydrogenase family protein; TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; L-lactate dehydrogenase complement(3510599..3511510) Rahnella sp. Y9602 10214269 YP_004213966.1 CDS Rahaq_3245 NC_015061.1 3511696 3512568 D KEGG: yen:YE3045 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; methylenetetrahydrofolate dehydrogenase 3511696..3512568 Rahnella sp. Y9602 10214270 YP_004213967.1 CDS Rahaq_3246 NC_015061.1 3512601 3512819 D KEGG: spe:Spro_1167 hypothetical protein; hypothetical protein 3512601..3512819 Rahnella sp. Y9602 10214271 YP_004213968.1 CDS Rahaq_3247 NC_015061.1 3512919 3513986 R PFAM: protein of unknown function DUF1176; KEGG: ebi:EbC_33160 conserved uncharacterized protein; hypothetical protein complement(3512919..3513986) Rahnella sp. Y9602 10214272 YP_004213969.1 CDS Rahaq_3248 NC_015061.1 3514242 3515417 D KEGG: pfo:Pfl01_4299 hypothetical protein; hypothetical protein 3514242..3515417 Rahnella sp. Y9602 10214273 YP_004213970.1 CDS Rahaq_3249 NC_015061.1 3515474 3516064 R PFAM: NUDIX hydrolase; KEGG: dze:Dd1591_3294 NUDIX hydrolase; NUDIX hydrolase complement(3515474..3516064) Rahnella sp. Y9602 10214274 YP_004213971.1 CDS Rahaq_3250 NC_015061.1 3516135 3516425 R PFAM: Uncharacterised conserved protein UCP037266; KEGG: spe:Spro_3491 hypothetical protein; hypothetical protein complement(3516135..3516425) Rahnella sp. Y9602 10214275 YP_004213972.1 CDS Rahaq_3251 NC_015061.1 3516769 3519924 D KEGG: ypb:YPTS_2869 aminoglycoside/multidrug efflux system; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 3516769..3519924 Rahnella sp. Y9602 10214276 YP_004213973.1 CDS Rahaq_3252 NC_015061.1 3520373 3520756 D PFAM: arsenate reductase and related; KEGG: eta:ETA_10730 hypothetical protein; arsenate reductase 3520373..3520756 Rahnella sp. Y9602 10214277 YP_004213974.1 CDS Rahaq_3253 NC_015061.1 3520758 3521885 D KEGG: yen:YE1147 succinyl-diaminopimelate desuccinylase; TIGRFAM: succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; succinyl-diaminopimelate desuccinylase 3520758..3521885 Rahnella sp. Y9602 10214278 YP_004213975.1 CDS Rahaq_3254 NC_015061.1 3521882 3522556 D PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: ypb:YPTS_2880 peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin; peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin 3521882..3522556 Rahnella sp. Y9602 10214279 YP_004213976.1 CDS Rahaq_3255 NC_015061.1 3522567 3522752 D KEGG: spe:Spro_3503 hypothetical protein; hypothetical protein 3522567..3522752 Rahnella sp. Y9602 10214280 YP_004213977.1 CDS Rahaq_3256 NC_015061.1 3522852 3524162 D KEGG: slt:Slit_2536 hypothetical protein; hypothetical protein 3522852..3524162 Rahnella sp. Y9602 10214281 YP_004213978.1 CDS Rahaq_3257 NC_015061.1 3524165 3525265 D KEGG: slt:Slit_2537 phosphoserine transaminase; PFAM: aminotransferase class V; Phosphoserine transaminase 3524165..3525265 Rahnella sp. Y9602 10214282 YP_004213979.1 CDS Rahaq_3258 NC_015061.1 3525345 3525995 R PFAM: phospholipase/Carboxylesterase; KEGG: ddd:Dda3937_02502 hypothetical protein; phospholipase/Carboxylesterase complement(3525345..3525995) Rahnella sp. Y9602 10214283 YP_004213980.1 CDS Rahaq_3259 NC_015061.1 3526104 3528089 R PFAM: GCN5-related N-acetyltransferase; KEGG: ypy:YPK_1368 protein of unknown function DUF699 ATPase; N-acetyltransferase GCN5 complement(3526104..3528089) Rahnella sp. Y9602 10214284 YP_004213981.1 CDS Rahaq_3260 NC_015061.1 3528091 3528543 R PFAM: protein of unknown function DUF441; KEGG: pct:PC1_1142 hypothetical protein; hypothetical protein complement(3528091..3528543) Rahnella sp. Y9602 10214285 YP_004213982.1 CDS Rahaq_3261 NC_015061.1 3528658 3529530 R PFAM: protein of unknown function zinc metallopeptidase; KEGG: spe:Spro_3506 hypothetical protein; hypothetical protein complement(3528658..3529530) Rahnella sp. Y9602 10214286 YP_004213983.1 CDS Rahaq_3262 NC_015061.1 3529750 3530463 R TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: yen:YE1140 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; phosphoribosylaminoimidazolesuccinocarboxamide synthase complement(3529750..3530463) Rahnella sp. Y9602 10214287 YP_004213984.1 CDS Rahaq_3263 NC_015061.1 3530520 3531599 R KEGG: ypz:YPZ3_2697 lipoprotein; lipoprotein complement(3530520..3531599) Rahnella sp. Y9602 10214288 YP_004213985.1 CDS Rahaq_3264 NC_015061.1 3531616 3532497 R KEGG: spe:Spro_3509 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; dihydrodipicolinate synthase complement(3531616..3532497) Rahnella sp. Y9602 10214289 YP_004213986.1 CDS Rahaq_3265 NC_015061.1 3532642 3533208 D PFAM: amino acid-binding ACT domain protein; KEGG: spe:Spro_3510 glycine cleavage system transcriptional repressor; amino acid-binding ACT protein 3532642..3533208 Rahnella sp. Y9602 10214290 YP_004213987.1 CDS Rahaq_3266 NC_015061.1 3533234 3533701 D KEGG: pam:PANA_2809 Bcp; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; peroxiredoxin 3533234..3533701 Rahnella sp. Y9602 10214291 YP_004213988.1 CDS Rahaq_3267 NC_015061.1 3533776 3534840 R PFAM: protein of unknown function UPF0118; KEGG: spe:Spro_3512 hypothetical protein; hypothetical protein complement(3533776..3534840) Rahnella sp. Y9602 10214292 YP_004213989.1 CDS Rahaq_3268 NC_015061.1 3535095 3536633 D PFAM: peptidase M48 Ste24p; KEGG: spe:Spro_3517 peptidase M48 Ste24p; peptidase M48 Ste24p 3535095..3536633 Rahnella sp. Y9602 10214293 YP_004213990.1 CDS Rahaq_3269 NC_015061.1 3536661 3537017 D KEGG: ypb:YPTS_2896 arsenate reductase; TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; arsenate reductase 3536661..3537017 Rahnella sp. Y9602 10214294 YP_004213991.1 CDS Rahaq_3270 NC_015061.1 3537071 3537778 R KEGG: yen:YE1130 DNA replication initiation factor; TIGRFAM: DnaA regulatory inactivator Hda; PFAM: Chromosomal replication initiator DnaA; DnaA regulatory inactivator Hda complement(3537071..3537778) Rahnella sp. Y9602 10214295 YP_004213992.1 CDS Rahaq_3271 NC_015061.1 3537955 3539247 R KEGG: spe:Spro_3522 uracil transporter; TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; uracil-xanthine permease complement(3537955..3539247) Rahnella sp. Y9602 10214296 YP_004213993.1 CDS Rahaq_3272 NC_015061.1 3539327 3539953 R KEGG: pam:PANA_2826 Upp; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; uracil phosphoribosyltransferase complement(3539327..3539953) Rahnella sp. Y9602 10214297 YP_004213994.1 CDS Rahaq_3273 NC_015061.1 3540186 3541223 D TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; KEGG: kpu:KP1_4076 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; phosphoribosylformylglycinamidine cyclo-ligase 3540186..3541223 Rahnella sp. Y9602 10214298 YP_004213995.1 CDS Rahaq_3274 NC_015061.1 3541260 3541898 D KEGG: spe:Spro_3525 phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; phosphoribosylglycinamide formyltransferase 3541260..3541898 Rahnella sp. Y9602 10214299 YP_004213996.1 CDS Rahaq_3275 NC_015061.1 3542119 3542694 D KEGG: yen:YE1124 spermidine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; Diamine N-acetyltransferase 3542119..3542694 Rahnella sp. Y9602 10214300 YP_004213997.1 CDS Rahaq_3276 NC_015061.1 3542743 3542850 D hypothetical protein 3542743..3542850 Rahnella sp. Y9602 10214301 YP_004213998.1 CDS Rahaq_3277 NC_015061.1 3543004 3545073 D TIGRFAM: Polyphosphate kinase; KEGG: spe:Spro_3541 polyphosphate kinase; PFAM: Polyphosphate kinase; polyphosphate kinase 3543004..3545073 Rahnella sp. Y9602 10214302 YP_004213999.1 CDS Rahaq_3278 NC_015061.1 3545096 3546640 D KEGG: spe:Spro_3542 exopolyphosphatase; PFAM: Ppx/GppA phosphatase; Ppx/GppA phosphatase 3545096..3546640 Rahnella sp. Y9602 10214303 YP_004214000.1 CDS Rahaq_3279 NC_015061.1 3546716 3548956 R KEGG: spe:Spro_3543 diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; MASE1 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase complement(3546716..3548956) Rahnella sp. Y9602 10214304 YP_004214001.1 CDS Rahaq_3280 NC_015061.1 3549167 3549277 R hypothetical protein complement(3549167..3549277) Rahnella sp. Y9602 10214305 YP_004214002.1 CDS Rahaq_3281 NC_015061.1 3549461 3549679 D KEGG: etr:ETAE_0948 hypothetical protein; hypothetical protein 3549461..3549679 Rahnella sp. Y9602 10214306 YP_004214003.1 CDS Rahaq_3282 NC_015061.1 3549689 3551128 D KEGG: spe:Spro_3545 magnesium transporter; TIGRFAM: magnesium transporter; PFAM: MgtE intracellular region; CBS domain containing protein; MgtE integral membrane region; magnesium transporter 3549689..3551128 Rahnella sp. Y9602 10214307 YP_004214004.1 CDS Rahaq_3283 NC_015061.1 3551333 3553615 D TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; PAS fold-3 domain protein; MASE1 domain protein; KEGG: cro:ROD_22031 signal transduction protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 3551333..3553615 Rahnella sp. Y9602 10214308 YP_004214005.1 CDS Rahaq_3284 NC_015061.1 3553623 3554495 R PFAM: AlkA domain protein; HhH-GPD family protein; KEGG: spe:Spro_3547 AraC family transcriptional regulator; SMART: HhH-GPD family protein; DNA-3-methyladenine glycosylase II complement(3553623..3554495) Rahnella sp. Y9602 10214309 YP_004214006.1 CDS Rahaq_3285 NC_015061.1 3554564 3555955 R TIGRFAM: cysteinyl-tRNA synthetase; KEGG: spe:Spro_1166 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR; cysteinyl-tRNA synthetase complement(3554564..3555955) Rahnella sp. Y9602 10214310 YP_004214007.1 CDS Rahaq_3286 NC_015061.1 3556183 3556677 D KEGG: yen:YE3049 peptidyl-prolyl cis-trans isomerase B (rotamase B); PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; Peptidylprolyl isomerase 3556183..3556677 Rahnella sp. Y9602 10214311 YP_004214008.1 CDS Rahaq_3287 NC_015061.1 3556689 3557411 D KEGG: spe:Spro_1164 UDP-2,3-diacylglucosamine hydrolase; TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; PFAM: metallophosphoesterase; UDP-2,3-diacylglucosamine hydrolase 3556689..3557411 Rahnella sp. Y9602 10214312 YP_004214009.1 CDS Rahaq_3288 NC_015061.1 3557523 3558155 R PFAM: tRNA-hydroxylase; KEGG: aha:AHA_1871 tRNA-hydroxylase; tRNA-hydroxylase complement(3557523..3558155) Rahnella sp. Y9602 10214313 YP_004214010.1 CDS Rahaq_3289 NC_015061.1 3558124 3558288 R hypothetical protein complement(3558124..3558288) Rahnella sp. Y9602 10214314 YP_004214011.1 CDS Rahaq_3290 NC_015061.1 3558336 3558845 D TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: ddd:Dda3937_01682 N5-carboxyaminoimidazole ribonucleotide mutase; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 3558336..3558845 Rahnella sp. Y9602 10214315 YP_004214012.1 CDS Rahaq_3291 NC_015061.1 3558842 3559906 D TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: ebi:EbC_11210 phosphoribosylaminoimidazole carboxylase ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; phosphoribosylaminoimidazole carboxylase ATPase subunit 3558842..3559906 Rahnella sp. Y9602 10214316 YP_004214013.1 CDS Rahaq_3292 NC_015061.1 3560052 3562484 R PFAM: protein of unknown function DUF214; KEGG: spe:Spro_1159 hypothetical protein; hypothetical protein complement(3560052..3562484) Rahnella sp. Y9602 10214317 YP_004214014.1 CDS Rahaq_3293 NC_015061.1 3562481 3563167 R KEGG: spe:Spro_1158 ABC transporter ATP-binding protein YbbA; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(3562481..3563167) Rahnella sp. Y9602 10214318 YP_004214015.1 CDS Rahaq_3294 NC_015061.1 3563180 3563767 D KEGG: yen:YE3055 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; PFAM: lipolytic protein G-D-S-L family; lysophospholipase 3563180..3563767 Rahnella sp. Y9602 10214319 YP_004214016.1 CDS Rahaq_3295 NC_015061.1 3563890 3564666 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: spe:Spro_1156 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 3563890..3564666 Rahnella sp. Y9602 10214320 YP_004214017.1 CDS Rahaq_3296 NC_015061.1 3564754 3565611 D PFAM: Thioredoxin domain-containing protein; KEGG: spe:Spro_1155 thioredoxin domain-containing protein; thioredoxin domain-containing protein 3564754..3565611 Rahnella sp. Y9602 10214321 YP_004214018.1 CDS Rahaq_3297 NC_015061.1 3565848 3566768 D KEGG: spe:Spro_1153 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein; hypothetical protein 3565848..3566768 Rahnella sp. Y9602 10214322 YP_004214019.1 CDS Rahaq_3298 NC_015061.1 3566768 3567223 D PFAM: protein of unknown function DUF107; KEGG: spe:Spro_1152 hypothetical protein; hypothetical protein 3566768..3567223 Rahnella sp. Y9602 10214323 YP_004214020.1 CDS Rahaq_3299 NC_015061.1 3567220 3567624 R TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: ent:Ent638_0963 DNA-binding transcriptional regulator CueR; SMART: regulatory protein MerR; MerR family transcriptional regulator complement(3567220..3567624) Rahnella sp. Y9602 10214324 YP_004214021.1 CDS Rahaq_3300 NC_015061.1 3567716 3570259 D KEGG: yen:YE3061 copper exporting ATPase; TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; copper-translocating P-type ATPase 3567716..3570259 Rahnella sp. Y9602 10214325 YP_004214022.1 CDS Rahaq_3301 NC_015061.1 3570309 3571115 D PFAM: GumN family protein; KEGG: enc:ECL_01252 GumN family protein; GumN family protein 3570309..3571115 Rahnella sp. Y9602 10214326 YP_004214023.1 CDS Rahaq_3302 NC_015061.1 3571392 3571871 D KEGG: spe:Spro_1148 hypothetical protein; TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; ybaK/ebsC protein 3571392..3571871 Rahnella sp. Y9602 10214327 YP_004214024.1 CDS Rahaq_3303 NC_015061.1 3571917 3573128 D PFAM: major facilitator superfamily MFS_1; KEGG: pay:PAU_00978 fosmidomycin resistance protein; major facilitator superfamily protein 3571917..3573128 Rahnella sp. Y9602 10214328 YP_004214025.1 CDS Rahaq_3304 NC_015061.1 3573366 3575057 D KEGG: spe:Spro_1145 cation:proton antiport protein; TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; potassium efflux system protein 3573366..3575057 Rahnella sp. Y9602 10214329 YP_004214026.1 CDS Rahaq_3305 NC_015061.1 3575188 3576507 R KEGG: yen:YE3069 inosine-guanosine kinase; PFAM: PfkB domain protein; Inosine kinase complement(3575188..3576507) Rahnella sp. Y9602 10214330 YP_004214027.1 CDS Rahaq_3306 NC_015061.1 3576546 3577508 R TIGRFAM: ferrochelatase; KEGG: yen:YE3088 ferrochelatase; PFAM: ferrochelatase; ferrochelatase complement(3576546..3577508) Rahnella sp. Y9602 10214331 YP_004214028.1 CDS Rahaq_3307 NC_015061.1 3577780 3578424 R KEGG: ctu:Ctu_10810 adenylate kinase; TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain-containing protein; adenylate kinase complement(3577780..3578424) Rahnella sp. Y9602 10214332 YP_004214029.1 CDS Rahaq_3308 NC_015061.1 3578712 3580583 R KEGG: yen:YE3090 heat shock protein 90; PFAM: Heat shock protein Hsp90-like; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; Heat shock protein Hsp90-like protein complement(3578712..3580583) Rahnella sp. Y9602 10214333 YP_004214030.1 CDS Rahaq_3309 NC_015061.1 3580745 3581350 R TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain-containing protein; Zinc finger C4-type, RecR; KEGG: ebi:EbC_10460 recombination protein RecR; SMART: Toprim sub domain-containing protein; recombination protein RecR complement(3580745..3581350) Rahnella sp. Y9602 10214334 YP_004214031.1 CDS Rahaq_3310 NC_015061.1 3581350 3581679 R PFAM: Uncharacterised protein family UPF0133; KEGG: sgl:SG0690 hypothetical protein; hypothetical protein complement(3581350..3581679) Rahnella sp. Y9602 10214335 YP_004214032.1 CDS Rahaq_3311 NC_015061.1 3581721 3583670 R TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase; KEGG: spe:Spro_1135 DNA polymerase III subunits gamma and tau; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau complement(3581721..3583670) Rahnella sp. Y9602 10214336 YP_004214033.1 CDS Rahaq_3312 NC_015061.1 3583993 3586056 D KEGG: spe:Spro_0054 periplasmic alpha-amylase precursor; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; alpha amylase 3583993..3586056 Rahnella sp. Y9602 10214337 YP_004214034.1 CDS Rahaq_3313 NC_015061.1 3586119 3586670 R KEGG: spe:Spro_1134 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; adenine phosphoribosyltransferase complement(3586119..3586670) Rahnella sp. Y9602 10214338 YP_004214035.1 CDS Rahaq_3314 NC_015061.1 3586854 3587222 R PFAM: protein of unknown function DUF454; KEGG: cko:CKO_02681 hypothetical protein; hypothetical protein complement(3586854..3587222) Rahnella sp. Y9602 10214339 YP_004214036.1 CDS Rahaq_3315 NC_015061.1 3587337 3587873 D PFAM: Primosomal replication priB and priC; KEGG: spe:Spro_1132 primosomal replication PriB and PriC; primosomal replication priB and priC 3587337..3587873 Rahnella sp. Y9602 10214340 YP_004214037.1 CDS Rahaq_3316 NC_015061.1 3587957 3588142 D PFAM: Protein of unknown function DUF2496, YbaM-related; KEGG: ypm:YP_0803 hypothetical protein; hypothetical protein 3587957..3588142 Rahnella sp. Y9602 10214341 YP_004214038.1 CDS Rahaq_3317 NC_015061.1 3588203 3591598 R PFAM: MscS Mechanosensitive ion channel; KEGG: ypy:YPK_3204 potassium efflux protein KefA; mechanosensitive ion channel protein MscS complement(3588203..3591598) Rahnella sp. Y9602 10214342 YP_004214039.1 CDS Rahaq_3318 NC_015061.1 3591768 3592406 R PFAM: Tetracycline transcriptional repressor MAATS-type domain-containing protein; regulatory protein TetR; KEGG: yen:YE3099 DNA-binding transcriptional repressor AcrR; TetR family transcriptional regulator complement(3591768..3592406) Rahnella sp. Y9602 10214343 YP_004214040.1 CDS Rahaq_3319 NC_015061.1 3592548 3593723 D KEGG: spe:Spro_1127 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 3592548..3593723 Rahnella sp. Y9602 10214344 YP_004214041.1 CDS Rahaq_3320 NC_015061.1 3593740 3596892 D KEGG: enc:ECL_01233 AcrB protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 3593740..3596892 Rahnella sp. Y9602 10214345 YP_004214042.1 CDS Rahaq_3321 NC_015061.1 3597014 3597268 D KEGG: ypb:YPTS_1024 50S ribosomal protein L31 type B; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; 50S ribosomal protein L31 3597014..3597268 Rahnella sp. Y9602 10214346 YP_004214043.1 CDS Rahaq_3322 NC_015061.1 3597289 3597429 D KEGG: spe:Spro_1124 50S ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; 50S ribosomal protein L36 3597289..3597429 Rahnella sp. Y9602 10214347 YP_004214044.1 CDS Rahaq_3323 NC_015061.1 3597554 3598432 R PFAM: periplasmic solute binding protein; KEGG: spe:Spro_1123 periplasmic solute binding protein; periplasmic solute binding protein complement(3597554..3598432) Rahnella sp. Y9602 10214348 YP_004214045.1 CDS Rahaq_3324 NC_015061.1 3598476 3599333 R PFAM: ABC transporter; KEGG: yen:YE3110 ABC-transporter membrane protein; ABC transporter complement(3598476..3599333) Rahnella sp. Y9602 10214349 YP_004214046.1 CDS Rahaq_3325 NC_015061.1 3599330 3600091 R KEGG: yen:YE3111 ABC transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(3599330..3600091) Rahnella sp. Y9602 10214350 YP_004214047.1 CDS Rahaq_3326 NC_015061.1 3600441 3600794 D KEGG: spe:Spro_1120 hypothetical protein; hypothetical protein 3600441..3600794 Rahnella sp. Y9602 10214351 YP_004214048.1 CDS Rahaq_3327 NC_015061.1 3601024 3601392 D PFAM: Biofilm formation regulator YbaJ; KEGG: yen:YE3114 hypothetical protein; Biofilm formation regulator YbaJ 3601024..3601392 Rahnella sp. Y9602 10214352 YP_004214049.1 CDS Rahaq_3328 NC_015061.1 3601438 3601641 D PFAM: Haemolysin expression modulating family protein; KEGG: spe:Spro_1118 hemolysin expression-modulating protein; hemolysin expression modulating family protein 3601438..3601641 Rahnella sp. Y9602 10214353 YP_004214050.1 CDS Rahaq_3329 NC_015061.1 3601717 3602673 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebi:EbC_19580 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(3601717..3602673) Rahnella sp. Y9602 10214354 YP_004214051.1 CDS Rahaq_3330 NC_015061.1 3602813 3604600 D KEGG: ebi:EbC_19590 adenine deaminase; PFAM: amidohydrolase; adenine deaminase 3602813..3604600 Rahnella sp. Y9602 10214355 YP_004214052.1 CDS Rahaq_3331 NC_015061.1 3604677 3606026 D PFAM: Xanthine/uracil/vitamin C permease; KEGG: ebi:EbC_19600 xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease 3604677..3606026 Rahnella sp. Y9602 10214356 YP_004214053.1 CDS Rahaq_3332 NC_015061.1 3606443 3606751 D KEGG: esa:ESA_02839 hypothetical protein; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylated-DNA--protein-cysteine methyltransferase 3606443..3606751 Rahnella sp. Y9602 10214358 YP_004214054.1 CDS Rahaq_3333 NC_015061.1 3606820 3607401 R KEGG: spe:Spro_1112 lipoprotein; lipoprotein complement(3606820..3607401) Rahnella sp. Y9602 10214359 YP_004214055.1 CDS Rahaq_3334 NC_015061.1 3607673 3608539 D KEGG: spe:Spro_1111 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase; acyl-CoA thioesterase 3607673..3608539 Rahnella sp. Y9602 10214360 YP_004214056.1 CDS Rahaq_3335 NC_015061.1 3608680 3609969 R KEGG: spe:Spro_1110 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter; ammonium transporter complement(3608680..3609969) Rahnella sp. Y9602 10214361 YP_004214057.1 CDS Rahaq_3336 NC_015061.1 3610055 3610393 R PFAM: nitrogen regulatory protein P-II; KEGG: dze:Dd1591_3057 nitrogen regulatory protein P-II 2; nitrogen regulatory protein P-II complement(3610055..3610393) Rahnella sp. Y9602 10214362 YP_004214058.1 CDS Rahaq_3337 NC_015061.1 3610390 3610587 R hypothetical protein complement(3610390..3610587) Rahnella sp. Y9602 10214363 YP_004214059.1 CDS Rahaq_3338 NC_015061.1 3610644 3610760 D hypothetical protein 3610644..3610760 Rahnella sp. Y9602 10214364 YP_004214060.1 CDS Rahaq_3339 NC_015061.1 3610735 3612534 R KEGG: spe:Spro_1108 multidrug transporter membrane\ATP-binding components; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter complement(3610735..3612534) Rahnella sp. Y9602 10214365 YP_004214061.1 CDS Rahaq_3340 NC_015061.1 3612527 3614299 R KEGG: spe:Spro_1107 multidrug transporter membrane\ATP-binding components; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter complement(3612527..3614299) Rahnella sp. Y9602 10214366 YP_004214062.1 CDS Rahaq_3341 NC_015061.1 3614436 3614891 R KEGG: enc:ECL_01207 transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator complement(3614436..3614891) Rahnella sp. Y9602 10214367 YP_004214063.1 CDS Rahaq_3342 NC_015061.1 3615012 3616055 D PFAM: Pyridoxal-5'-phosphate-dependent protein subunit beta; KEGG: pct:PC1_1056 pyridoxal-5'-phosphate-dependent protein subunit beta; pyridoxal-5'-phosphate-dependent protein subunit beta 3615012..3616055 Rahnella sp. Y9602 10214368 YP_004214064.1 CDS Rahaq_3343 NC_015061.1 3616226 3617047 R KEGG: spe:Spro_1104 Cof-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase complement(3616226..3617047) Rahnella sp. Y9602 10214369 YP_004214065.1 CDS Rahaq_3344 NC_015061.1 3617240 3618952 D PFAM: extracellular solute-binding protein family 5; KEGG: spe:Spro_1103 extracellular solute-binding protein; family 5 extracellular solute-binding protein 3617240..3618952 Rahnella sp. Y9602 10214370 YP_004214066.1 CDS Rahaq_3345 NC_015061.1 3619063 3619761 D KEGG: spe:Spro_1102 queuosine biosynthesis protein QueC; TIGRFAM: exsB protein; PFAM: Queuosine synthesis-like; exsB protein 3619063..3619761 Rahnella sp. Y9602 10214371 YP_004214067.1 CDS Rahaq_3346 NC_015061.1 3619859 3620260 R PFAM: thioesterase superfamily protein; KEGG: yen:YE3128 hypothetical protein; thioesterase superfamily protein complement(3619859..3620260) Rahnella sp. Y9602 10214372 YP_004214068.1 CDS Rahaq_3347 NC_015061.1 3620379 3620762 R TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; KEGG: pwa:Pecwa_3259 competence protein ComEA helix-hairpin-helix repeat protein; competence protein ComEA complement(3620379..3620762) Rahnella sp. Y9602 10214373 YP_004214069.1 CDS Rahaq_3348 NC_015061.1 3620902 3622782 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: spe:Spro_1099 peptidyl-prolyl cis-trans isomerase (rotamase D); PpiC-type peptidyl-prolyl cis-trans isomerase complement(3620902..3622782) Rahnella sp. Y9602 10214374 YP_004214070.1 CDS Rahaq_3349 NC_015061.1 3622947 3623222 R KEGG: cro:ROD_04951 DNA-binding protein HU-beta; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; histone family protein DNA-binding protein complement(3622947..3623222) Rahnella sp. Y9602 10214375 YP_004214071.1 CDS Rahaq_3350 NC_015061.1 3623439 3625793 R SMART: peptidase S16 lon domain protein; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: spe:Spro_1097 DNA-binding ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase; ATP-dependent protease La complement(3623439..3625793) Rahnella sp. Y9602 10214376 YP_004214072.1 CDS Rahaq_3351 NC_015061.1 3625985 3627259 R TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; KEGG: yen:YE3133 ATP-dependent protease ATP-binding subunit ClpX; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding subunit ClpX complement(3625985..3627259) Rahnella sp. Y9602 10214377 YP_004214073.1 CDS Rahaq_3352 NC_015061.1 3627465 3628088 R TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; KEGG: yen:YE3134 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP; ATP-dependent Clp protease, proteolytic subunit ClpP complement(3627465..3628088) Rahnella sp. Y9602 10214378 YP_004214074.1 CDS Rahaq_3353 NC_015061.1 3628502 3629806 R KEGG: ypb:YPTS_0999 trigger factor; TIGRFAM: trigger factor; PFAM: trigger factor domain-containing protein; peptidylprolyl isomerase FKBP-type; trigger factor complement(3628502..3629806) Rahnella sp. Y9602 10214379 YP_004214075.1 CDS Rahaq_3354 NC_015061.1 3630239 3630553 R PFAM: BolA family protein; KEGG: spe:Spro_1093 transcriptional regulator BolA; BolA family protein complement(3630239..3630553) Rahnella sp. Y9602 10214380 YP_004214076.1 CDS Rahaq_3355 NC_015061.1 3630882 3631460 D PFAM: Uncharacterized lipoprotein; KEGG: spe:Spro_1092 hypothetical protein; lipoprotein 3630882..3631460 Rahnella sp. Y9602 10214381 YP_004214077.1 CDS Rahaq_3356 NC_015061.1 3631609 3633087 D KEGG: spe:Spro_1091 muropeptide transporter; TIGRFAM: AmpG-related permease; PFAM: major facilitator superfamily MFS_1; AmpG-related permease 3631609..3633087 Rahnella sp. Y9602 10214382 YP_004214078.1 CDS Rahaq_3357 NC_015061.1 3633521 3634480 D KEGG: spe:Spro_1090 cytochrome o ubiquinol oxidase subunit II; TIGRFAM: ubiquinol oxidase, subunit II; PFAM: COX aromatic rich domain protein; cytochrome c oxidase subunit II; ubiquinol oxidase subunit II 3633521..3634480 Rahnella sp. Y9602 10214383 YP_004214079.1 CDS Rahaq_3358 NC_015061.1 3634484 3636475 D TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; KEGG: spe:Spro_1089 cytochrome o ubiquinol oxidase subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome o ubiquinol oxidase subunit I 3634484..3636475 Rahnella sp. Y9602 10214384 YP_004214080.1 CDS Rahaq_3359 NC_015061.1 3636465 3637079 D KEGG: spe:Spro_1088 cytochrome o ubiquinol oxidase subunit III; TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; cytochrome o ubiquinol oxidase subunit III 3636465..3637079 Rahnella sp. Y9602 10214385 YP_004214081.1 CDS Rahaq_3360 NC_015061.1 3637079 3637411 D KEGG: spe:Spro_1087 cytochrome o ubiquinol oxidase subunit IV; TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; cytochrome o ubiquinol oxidase subunit IV 3637079..3637411 Rahnella sp. Y9602 10214386 YP_004214082.1 CDS Rahaq_3361 NC_015061.1 3637430 3638314 D KEGG: spe:Spro_1086 protoheme IX farnesyltransferase; TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; protoheme IX farnesyltransferase 3637430..3638314 Rahnella sp. Y9602 10214387 YP_004214083.1 CDS Rahaq_3362 NC_015061.1 3638487 3639851 D PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_1085 major facilitator transporter; major facilitator superfamily protein 3638487..3639851 Rahnella sp. Y9602 10214388 YP_004214084.1 CDS Rahaq_3363 NC_015061.1 3640021 3641319 D PFAM: Oxidoreductase domain; oxidoreductase domain protein; KEGG: cro:ROD_34531 oxidoreductase; Oxidoreductase domain protein 3640021..3641319 Rahnella sp. Y9602 10214389 YP_004214085.1 CDS Rahaq_3364 NC_015061.1 3641609 3642613 R PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ddd:Dda3937_00500 ISEch4 transposase; transposase IS116/IS110/IS902 family protein complement(3641609..3642613) Rahnella sp. Y9602 10214390 YP_004214086.1 CDS Rahaq_3365 NC_015061.1 3642731 3643222 R PFAM: protein of unknown function DUF520; KEGG: eca:ECA1137 nucleotide-binding protein; hypothetical protein complement(3642731..3643222) Rahnella sp. Y9602 10214391 YP_004214087.1 CDS Rahaq_3366 NC_015061.1 3643323 3643466 D hypothetical protein 3643323..3643466 Rahnella sp. Y9602 10214392 YP_004214088.1 CDS Rahaq_3367 NC_015061.1 3643463 3644374 D TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: spe:Spro_1083 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase 3643463..3644374 Rahnella sp. Y9602 10214393 YP_004214089.1 CDS Rahaq_3368 NC_015061.1 3644337 3644945 D KEGG: spe:Spro_1082 DJ-1 family protein; TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain-containing protein; DJ-1 family protein 3644337..3644945 Rahnella sp. Y9602 10214394 YP_004214090.1 CDS Rahaq_3369 NC_015061.1 3645012 3646460 R KEGG: eca:ECA1134 thiamine biosynthesis protein ThiI; TIGRFAM: thiamine biosynthesis/tRNA modification protein ThiI; PFAM: Thiamine biosynthesis protein-like; THUMP domain-containing protein; thiamine biosynthesis/tRNA modification protein ThiI complement(3645012..3646460) Rahnella sp. Y9602 10214395 YP_004214091.1 CDS Rahaq_3370 NC_015061.1 3646737 3646979 D KEGG: ctu:Ctu_09980 exodeoxyribonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; exodeoxyribonuclease VII small subunit 3646737..3646979 Rahnella sp. Y9602 10214396 YP_004214092.1 CDS Rahaq_3371 NC_015061.1 3646985 3647914 D PFAM: Polyprenyl synthetase; KEGG: spe:Spro_1079 geranyltranstransferase; polyprenyl synthetase 3646985..3647914 Rahnella sp. Y9602 10214397 YP_004214093.1 CDS Rahaq_3372 NC_015061.1 3647933 3649795 D KEGG: spe:Spro_1078 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain-containing protein; deoxyxylulose-5-phosphate synthase 3647933..3649795 Rahnella sp. Y9602 10214398 YP_004214094.1 CDS Rahaq_3373 NC_015061.1 3649948 3650922 D PFAM: aldo/keto reductase; KEGG: spe:Spro_1077 aldo/keto reductase; aldo/keto reductase 3649948..3650922 Rahnella sp. Y9602 10214399 YP_004214095.1 CDS Rahaq_3374 NC_015061.1 3650992 3651552 R KEGG: spe:Spro_1076 phosphatidylglycerophosphatase A; PFAM: phosphatidylglycerophosphatase A; Phosphatidylglycerophosphatase complement(3650992..3651552) Rahnella sp. Y9602 10214400 YP_004214096.1 CDS Rahaq_3375 NC_015061.1 3651549 3652535 R TIGRFAM: thiamine-monophosphate kinase; KEGG: spe:Spro_1075 thiamine monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; thiamine-monophosphate kinase complement(3651549..3652535) Rahnella sp. Y9602 10214401 YP_004214097.1 CDS Rahaq_3376 NC_015061.1 3652701 3653114 R KEGG: dze:Dd1591_3088 transcription antitermination protein NusB; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; NusB antitermination factor complement(3652701..3653114) Rahnella sp. Y9602 10214402 YP_004214098.1 CDS Rahaq_3377 NC_015061.1 3653135 3653605 R KEGG: ypb:YPTS_0976 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase complement(3653135..3653605) Rahnella sp. Y9602 10214403 YP_004214099.1 CDS Rahaq_3378 NC_015061.1 3653729 3654865 R TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: spe:Spro_1072 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; riboflavin biosynthesis protein RibD complement(3653729..3654865) Rahnella sp. Y9602 10214404 YP_004214100.1 CDS Rahaq_3379 NC_015061.1 3654875 3655324 R PFAM: ATP-cone domain protein; KEGG: spe:Spro_1071 transcriptional regulator NrdR; ATP-cone domain-containing protein complement(3654875..3655324) Rahnella sp. Y9602 10214405 YP_004214101.1 CDS Rahaq_3380 NC_015061.1 3655485 3656048 D KEGG: dze:Dd1591_3093 hypothetical protein; hypothetical protein 3655485..3656048 Rahnella sp. Y9602 10214406 YP_004214102.1 CDS Rahaq_3381 NC_015061.1 3656130 3657104 R KEGG: spe:Spro_1064 preprotein translocase subunit SecF; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecF complement(3656130..3657104) Rahnella sp. Y9602 10214407 YP_004214103.1 CDS Rahaq_3382 NC_015061.1 3657115 3658929 R KEGG: spe:Spro_1063 preprotein translocase subunit SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecD complement(3657115..3658929) Rahnella sp. Y9602 10214408 YP_004214104.1 CDS Rahaq_3383 NC_015061.1 3658990 3659322 R KEGG: yen:YE3165 preprotein translocase subunit YajC; TIGRFAM: preprotein translocase YajC subunit; PFAM: YajC family protein; preprotein translocase subunit YajC complement(3658990..3659322) Rahnella sp. Y9602 10214409 YP_004214105.1 CDS Rahaq_3384 NC_015061.1 3659484 3660608 R TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; KEGG: eca:ECA1120 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase complement(3659484..3660608) Rahnella sp. Y9602 10214410 YP_004214106.1 CDS Rahaq_3385 NC_015061.1 3660723 3661793 R KEGG: ypi:YpsIP31758_3124 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; S-adenosylmethionine/tRNA-ribosyltransferase- isomerase complement(3660723..3661793) Rahnella sp. Y9602 10214411 YP_004214107.1 CDS Rahaq_3386 NC_015061.1 3661928 3662509 D KEGG: yen:YE3173 hypothetical protein; PFAM: protein of unknown function DUF479; ACP phosphodiesterase 3661928..3662509 Rahnella sp. Y9602 10214412 YP_004214108.1 CDS Rahaq_3387 NC_015061.1 3662734 3663336 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; KEGG: dda:Dd703_2909 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 3662734..3663336 Rahnella sp. Y9602 10214413 YP_004214109.1 CDS Rahaq_3388 NC_015061.1 3663594 3665345 D TIGRFAM: gamma-glutamyltransferase; KEGG: spe:Spro_1057 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 3663594..3665345 Rahnella sp. Y9602 10214414 YP_004214110.1 CDS Rahaq_3389 NC_015061.1 3665473 3666903 R PFAM: amino acid permease-associated region; KEGG: spe:Spro_1046 proline-specific permease; amino acid permease complement(3665473..3666903) Rahnella sp. Y9602 10214415 YP_004214111.1 CDS Rahaq_3390 NC_015061.1 3667060 3668379 R KEGG: spe:Spro_1045 branched-chain amino acid transport system II carrier protein; TIGRFAM: branched-chain amino acid transport system II carrier protein; PFAM: branched-chain amino acid transport system II carrier protein; branched-chain amino acid transport system II carrier protein complement(3667060..3668379) Rahnella sp. Y9602 10214416 YP_004214112.1 CDS Rahaq_3391 NC_015061.1 3668824 3669927 R PFAM: methionine synthase vitamin-B12 independent; KEGG: eay:EAM_0952 cobalamin-independent methionine biosynthesis protein; vitamin-B12 independent methionine synthase complement(3668824..3669927) Rahnella sp. Y9602 10214417 YP_004214113.1 CDS Rahaq_3392 NC_015061.1 3670198 3670578 D KEGG: pay:PAU_01640 hypothetical protein; hypothetical protein 3670198..3670578 Rahnella sp. Y9602 10214418 YP_004214114.1 CDS Rahaq_3393 NC_015061.1 3670571 3670903 D KEGG: pay:PAU_01639 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 3670571..3670903 Rahnella sp. Y9602 10214419 YP_004214115.1 CDS Rahaq_3394 NC_015061.1 3670937 3672256 R TIGRFAM: phosphate regulon sensor kinase PhoR; PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: ypy:YPK_3275 phosphate regulon sensor protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(3670937..3672256) Rahnella sp. Y9602 10214420 YP_004214116.1 CDS Rahaq_3395 NC_015061.1 3672279 3672968 R TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; KEGG: spe:Spro_1041 two component transcriptional regulator; SMART: response regulator receiver; winged helix family two component transcriptional regulator PhoB complement(3672279..3672968) Rahnella sp. Y9602 10214421 YP_004214117.1 CDS Rahaq_3396 NC_015061.1 3673196 3674434 D KEGG: spe:Spro_1040 exonuclease subunit SbcD; TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; nuclease SbcCD subunit D 3673196..3674434 Rahnella sp. Y9602 10214422 YP_004214118.1 CDS Rahaq_3397 NC_015061.1 3674431 3677679 D KEGG: spe:Spro_1039 exonuclease SbcC; TIGRFAM: exonuclease SbcC; PFAM: SMC domain protein; exonuclease SbcC 3674431..3677679 Rahnella sp. Y9602 10214423 YP_004214119.1 CDS Rahaq_3399 NC_015061.1 3678612 3679301 D KEGG: azl:AZL_e02010 hypothetical protein; hypothetical protein 3678612..3679301 Rahnella sp. Y9602 10214425 YP_004214120.1 CDS Rahaq_3400 NC_015061.1 3679361 3680281 R PFAM: ROK family protein; KEGG: yen:YE3185 fructokinase; ROK family protein complement(3679361..3680281) Rahnella sp. Y9602 10214426 YP_004214121.1 CDS Rahaq_3401 NC_015061.1 3680491 3681405 D PFAM: exonuclease RdgC; KEGG: spe:Spro_1027 recombination associated protein; exonuclease RdgC 3680491..3681405 Rahnella sp. Y9602 10214427 YP_004214122.1 CDS Rahaq_3402 NC_015061.1 3681464 3681754 R PFAM: protein of unknown function DUF1255; KEGG: ypb:YPTS_0953 hypothetical protein; hypothetical protein complement(3681464..3681754) Rahnella sp. Y9602 10214428 YP_004214123.1 CDS Rahaq_3403 NC_015061.1 3681934 3682611 R PFAM: AroM family protein; KEGG: spe:Spro_1025 hypothetical protein; AroM family protein complement(3681934..3682611) Rahnella sp. Y9602 10214429 YP_004214124.1 CDS Rahaq_3404 NC_015061.1 3682616 3683545 R PFAM: protein of unknown function DUF1177; KEGG: spe:Spro_1024 hypothetical protein; hypothetical protein complement(3682616..3683545) Rahnella sp. Y9602 10214430 YP_004214125.1 CDS Rahaq_3405 NC_015061.1 3683681 3685258 R PFAM: Oligopeptide transporter OPT superfamily protein; KEGG: spe:Spro_1023 oligopeptide transporter OPT superfamily protein; Oligopeptide transporter OPT superfamily protein complement(3683681..3685258) Rahnella sp. Y9602 10214431 YP_004214126.1 CDS Rahaq_3406 NC_015061.1 3685335 3686117 R KEGG: spe:Spro_1022 IclR family transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; IclR family transcriptional regulator complement(3685335..3686117) Rahnella sp. Y9602 10214432 YP_004214127.1 CDS Rahaq_3407 NC_015061.1 3686338 3686454 R KEGG: etr:ETAE_1298 hypothetical protein; hypothetical protein complement(3686338..3686454) Rahnella sp. Y9602 10214433 YP_004214128.1 CDS Rahaq_3408 NC_015061.1 3686666 3687190 R KEGG: spe:Spro_1018 shikimate kinase II; PFAM: shikimate kinase; shikimate kinase complement(3686666..3687190) Rahnella sp. Y9602 10214434 YP_004214129.1 CDS Rahaq_3409 NC_015061.1 3687466 3688044 R KEGG: spe:Spro_1013 methyltransferase; methyltransferase complement(3687466..3688044) Rahnella sp. Y9602 10214435 YP_004214130.1 CDS Rahaq_3410 NC_015061.1 3688305 3688580 R PFAM: protein of unknown function DUF1471; KEGG: ebi:EbC_33250 conserved uncharacterized protein; hypothetical protein complement(3688305..3688580) Rahnella sp. Y9602 10214436 YP_004214131.1 CDS Rahaq_3411 NC_015061.1 3688975 3689895 D PFAM: protein of unknown function DUF808; KEGG: scl:sce1374 hypothetical protein; hypothetical protein 3688975..3689895 Rahnella sp. Y9602 10214437 YP_004214132.1 CDS Rahaq_3412 NC_015061.1 3689952 3690722 R PFAM: methyltransferase type 11; KEGG: yen:YE3193 hypothetical protein; type 11 methyltransferase complement(3689952..3690722) Rahnella sp. Y9602 10214438 YP_004214133.1 CDS Rahaq_3413 NC_015061.1 3690861 3691652 D SMART: helix-turn-helix domain protein; KEGG: pwa:Pecwa_3439 transcriptional regulator, XRE family; helix-turn-helix domain-containing protein 3690861..3691652 Rahnella sp. Y9602 10214439 YP_004214134.1 CDS Rahaq_3414 NC_015061.1 3691681 3693003 R PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein; transposase IS4 family protein complement(3691681..3693003) Rahnella sp. Y9602 10214440 YP_004214135.1 CDS Rahaq_3415 NC_015061.1 3693217 3693765 D PFAM: GCN5-related N-acetyltransferase; KEGG: hse:Hsero_0157 acetyltransferase; N-acetyltransferase GCN5 3693217..3693765 Rahnella sp. Y9602 10214441 YP_004214136.1 CDS Rahaq_3416 NC_015061.1 3693800 3694645 D KEGG: spe:Spro_1432 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; rhodanese domain-containing protein 3693800..3694645 Rahnella sp. Y9602 10214442 YP_004214137.1 CDS Rahaq_3417 NC_015061.1 3694692 3695498 R KEGG: spe:Spro_1449 hypothetical protein; hypothetical protein complement(3694692..3695498) Rahnella sp. Y9602 10214443 YP_004214138.1 CDS Rahaq_3418 NC_015061.1 3695511 3696518 R PFAM: fatty acid desaturase; KEGG: spe:Spro_1444 fatty acid desaturase; fatty acid desaturase complement(3695511..3696518) Rahnella sp. Y9602 10214444 YP_004214139.1 CDS Rahaq_3419 NC_015061.1 3696619 3697920 R KEGG: yen:YE1296 glucose-1-phosphatase/inositol phosphatase; PFAM: histidine acid phosphatase; glucose-1-phosphatase complement(3696619..3697920) Rahnella sp. Y9602 10214445 YP_004214140.1 CDS Rahaq_3420 NC_015061.1 3698091 3698711 R PFAM: Antimicrobial peptide resistance and lipid A acylation PagP; KEGG: ebi:EbC_12320 antimicrobial peptide resistance and lipid A acylation protein; antimicrobial peptide resistance and lipid A acylation PagP complement(3698091..3698711) Rahnella sp. Y9602 10214446 YP_004214141.1 CDS Rahaq_3421 NC_015061.1 3698908 3699531 R PFAM: Antimicrobial peptide resistance and lipid A acylation PagP; KEGG: spe:Spro_0993 palmitoyl transferase; antimicrobial peptide resistance and lipid A acylation PagP complement(3698908..3699531) Rahnella sp. Y9602 10214447 YP_004214142.1 CDS Rahaq_3422 NC_015061.1 3699807 3703697 R TIGRFAM: phosphoribosylformylglycinamidine synthase; KEGG: spe:Spro_3654 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; phosphoribosylformylglycinamidine synthase complement(3699807..3703697) Rahnella sp. Y9602 10214448 YP_004214143.1 CDS Rahaq_3423 NC_015061.1 3703976 3705436 D manually curated; PFAM: lytic transglycosylase catalytic; extracellular solute-binding protein family 3; KEGG: yen:YE1031 transglycosylase; SMART: extracellular solute-binding protein family 3; lytic transglycosylase 3703976..3705436 Rahnella sp. Y9602 10214449 YP_004214144.1 CDS Rahaq_3424 NC_015061.1 3705455 3705997 R PFAM: CMP/dCMP deaminase zinc-binding; KEGG: spe:Spro_3656 CMP/dCMP deaminase zinc-binding; CMP/dCMP deaminase zinc-binding protein complement(3705455..3705997) Rahnella sp. Y9602 10214450 YP_004214145.1 CDS Rahaq_3425 NC_015061.1 3706054 3706692 R TIGRFAM: HAD superfamily (subfamily IF) hydrolase, YfhB; KEGG: spe:Spro_3659 hypothetical protein; HAD superfamily hydrolase complement(3706054..3706692) Rahnella sp. Y9602 10214451 YP_004214146.1 CDS Rahaq_3426 NC_015061.1 3706697 3708082 R KEGG: spe:Spro_3660 phosphotransferase system EIIC; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; Protein-N(pi)-phosphohistidine--sugar phosphotransferase complement(3706697..3708082) Rahnella sp. Y9602 10214452 YP_004214147.1 CDS Rahaq_3427 NC_015061.1 3708099 3709004 R KEGG: spe:Spro_3661 N-acetylmuramic acid-6-phosphate etherase; TIGRFAM: glucokinase regulatory-like protein; PFAM: sugar isomerase (SIS); RpiR family transcriptional regulator complement(3708099..3709004) Rahnella sp. Y9602 10214453 YP_004214148.1 CDS Rahaq_3428 NC_015061.1 3709148 3709996 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: spe:Spro_3662 DNA-binding transcriptional regulator; RpiR family transcriptional regulator 3709148..3709996 Rahnella sp. Y9602 10214454 YP_004214149.1 CDS Rahaq_3429 NC_015061.1 3710110 3710364 D KEGG: spe:Spro_3664 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 3710110..3710364 Rahnella sp. Y9602 10214455 YP_004214150.1 CDS Rahaq_3430 NC_015061.1 3710399 3710779 R KEGG: ypb:YPTS_2997 4'-phosphopantetheinyl transferase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; holo-(acyl-carrier-protein) synthase complement(3710399..3710779) Rahnella sp. Y9602 10214456 YP_004214151.1 CDS Rahaq_3431 NC_015061.1 3710779 3711510 R TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; KEGG: yen:YE1020 pyridoxine 5'-phosphate synthase; PFAM: Pyridoxal phosphate biosynthetic protein PdxJ; pyridoxal phosphate biosynthetic protein PdxJ complement(3710779..3711510) Rahnella sp. Y9602 10214457 YP_004214152.1 CDS Rahaq_3432 NC_015061.1 3711614 3712351 R KEGG: yen:YE1019 DNA repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; DNA repair protein RecO complement(3711614..3712351) Rahnella sp. Y9602 10214458 YP_004214153.1 CDS Rahaq_3433 NC_015061.1 3712363 3713268 R KEGG: ddc:Dd586_3105 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; GTP-binding protein Era complement(3712363..3713268) Rahnella sp. Y9602 10214459 YP_004214154.1 CDS Rahaq_3434 NC_015061.1 3713265 3713945 R KEGG: spe:Spro_3669 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; manually curated; TIGRFAM: ribonuclease III; SMART: ribonuclease III; double-stranded RNA binding domain protein; ribonuclease III complement(3713265..3713945) Rahnella sp. Y9602 10214460 YP_004214155.1 CDS Rahaq_3435 NC_015061.1 3714157 3715134 R KEGG: spe:Spro_3670 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Peptidase S26, conserved region; signal peptidase I complement(3714157..3715134) Rahnella sp. Y9602 10214461 YP_004214156.1 CDS Rahaq_3436 NC_015061.1 3715163 3717076 R KEGG: pwa:Pecwa_1202 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; GTP-binding protein LepA complement(3715163..3717076) Rahnella sp. Y9602 10214462 YP_004214157.1 CDS Rahaq_3437 NC_015061.1 3717387 3718205 D KEGG: spe:Spro_3672 hypothetical protein; hypothetical protein 3717387..3718205 Rahnella sp. Y9602 10214463 YP_004214158.1 CDS Rahaq_3438 NC_015061.1 3718266 3718742 R PFAM: Positive regulator of sigma(E) RseC/MucC; KEGG: ypb:YPTS_3005 SoxR reducing system protein RseC; sigma E positive regulator RseC/MucC complement(3718266..3718742) Rahnella sp. Y9602 10214464 YP_004214159.1 CDS Rahaq_3439 NC_015061.1 3718791 3719741 R PFAM: MucB/RseB family protein; KEGG: spe:Spro_3674 periplasmic negative regulator of sigmaE; sigma E regulatory protein MucB/RseB complement(3718791..3719741) Rahnella sp. Y9602 10214465 YP_004214160.1 CDS Rahaq_3440 NC_015061.1 3719741 3720388 R PFAM: Anti sigma-E protein RseA family protein; Anti sigma-E protein RseA domain protein; KEGG: spe:Spro_3675 anti-RNA polymerase sigma factor SigE; anti sigma-E protein, RseA complement(3719741..3720388) Rahnella sp. Y9602 10214466 YP_004214161.1 CDS Rahaq_3441 NC_015061.1 3720419 3720994 R KEGG: spe:Spro_3676 RNA polymerase sigma factor RpoE; TIGRFAM: RNA polymerase sigma factor RpoE; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(3720419..3720994) Rahnella sp. Y9602 10214467 YP_004214162.1 CDS Rahaq_3442 NC_015061.1 3721173 3722810 D KEGG: yen:YE1009 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; L-aspartate oxidase 3721173..3722810 Rahnella sp. Y9602 10214468 YP_004214163.1 CDS Rahaq_3443 NC_015061.1 3722874 3723620 R KEGG: ypb:YPTS_3010 methyltransferase small; manually curated; PFAM: methyltransferase small; methyltransferase small complement(3722874..3723620) Rahnella sp. Y9602 10214469 YP_004214164.1 CDS Rahaq_3444 NC_015061.1 3723777 3725105 D KEGG: ypy:YPK_1179 ATP-dependent RNA helicase SrmB; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase 3723777..3725105 Rahnella sp. Y9602 10214470 YP_004214165.1 CDS Rahaq_3445 NC_015061.1 3725198 3725581 R PFAM: formate C-acetyltransferase glycine radical; KEGG: yen:YE1003 autonomous glycyl radical cofactor GrcA; formate C-acetyltransferase glycine radical complement(3725198..3725581) Rahnella sp. Y9602 10214471 YP_004214166.1 CDS Rahaq_3446 NC_015061.1 3725921 3726601 D KEGG: spe:Spro_3683 uracil-DNA glycosylase; TIGRFAM: uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily; uracil-DNA glycosylase 3725921..3726601 Rahnella sp. Y9602 10214472 YP_004214167.1 CDS Rahaq_3447 NC_015061.1 3726662 3727249 R PFAM: GrpE protein; KEGG: sgl:SG1798 heat shock protein GrpE; heat shock protein GrpE complement(3726662..3727249) Rahnella sp. Y9602 10214473 YP_004214168.1 CDS Rahaq_3448 NC_015061.1 3727387 3728265 D PFAM: ATP-NAD/AcoX kinase; KEGG: spe:Spro_3685 inorganic polyphosphate/ATP-NAD kinase; ATP-NAD/AcoX kinase 3727387..3728265 Rahnella sp. Y9602 10214474 YP_004214169.1 CDS Rahaq_3449 NC_015061.1 3728362 3730023 D KEGG: ypi:YpsIP31758_2889 recombination and repair protein; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; DNA repair protein RecN 3728362..3730023 Rahnella sp. Y9602 10214475 YP_004214170.1 CDS Rahaq_3450 NC_015061.1 3730130 3730480 D PFAM: SmpA/OmlA domain-containing protein; KEGG: ebi:EbC_34280 small protein A; SmpA/OmlA domain-containing protein 3730130..3730480 Rahnella sp. Y9602 10214476 YP_004214171.1 CDS Rahaq_3451 NC_015061.1 3730563 3731885 R PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein; transposase IS4 family protein complement(3730563..3731885) Rahnella sp. Y9602 10214477 YP_004214172.1 CDS Rahaq_3452 NC_015061.1 3731983 3732267 R PFAM: protein of unknown function UPF0125; KEGG: spe:Spro_3688 hypothetical protein; hypothetical protein complement(3731983..3732267) Rahnella sp. Y9602 10214478 YP_004214173.1 CDS Rahaq_3453 NC_015061.1 3732260 3732694 R PFAM: cyclase/dehydrase; KEGG: yen:YE0995 hypothetical protein; cyclase/dehydrase complement(3732260..3732694) Rahnella sp. Y9602 10214479 YP_004214174.1 CDS Rahaq_3454 NC_015061.1 3732851 3733333 D KEGG: epy:EpC_09860 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; SsrA-binding protein 3732851..3733333 Rahnella sp. Y9602 10214480 YP_004214175.1 CDS Rahaq_3455 NC_015061.1 3734581 3734928 R KEGG: esa:ESA_02980 hypothetical protein; hypothetical protein complement(3734581..3734928) Rahnella sp. Y9602 10214482 YP_004214176.1 CDS Rahaq_3456 NC_015061.1 3735347 3735598 D manually curated; PFAM: regulatory protein ArsR; KEGG: ent:Ent638_2275 ArsR family transcriptional regulator; SMART: regulatory protein ArsR; regulatory protein ArsR 3735347..3735598 Rahnella sp. Y9602 10214483 YP_004214177.1 CDS Rahaq_3457 NC_015061.1 3735595 3736125 D KEGG: ent:Ent638_2274 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; rhodanese domain-containing protein 3735595..3736125 Rahnella sp. Y9602 10214484 YP_004214178.1 CDS Rahaq_3459 NC_015061.1 3736946 3739813 D KEGG: cro:ROD_44821 polysaccharide degrading enzyme; PFAM: glycoside hydrolase family 18; Carbohydrate-binding family V/XII; SMART: chitinase II; glycoside hydrolase 3736946..3739813 Rahnella sp. Y9602 10214486 YP_004214179.1 CDS Rahaq_3460 NC_015061.1 3740169 3740948 D TIGRFAM: cationic amino acid ABC transporter periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: ebi:EbC_03840 lysine-arginine-ornithine ABC transporter periplasmic ligand binding protein; SMART: extracellular solute-binding protein family 3; cationic amino acid ABC transporter periplasmic binding protein 3740169..3740948 Rahnella sp. Y9602 10214487 YP_004214180.1 CDS Rahaq_3461 NC_015061.1 3741139 3741921 R KEGG: set:SEN3097 galactitol utilization operon repressor; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator complement(3741139..3741921) Rahnella sp. Y9602 10214488 YP_004214181.1 CDS Rahaq_3462 NC_015061.1 3742200 3743495 D KEGG: set:SEN3092 sugar kinase; TIGRFAM: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit; PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ; D-tagatose-bisphosphate aldolase non-catalytic subunit 3742200..3743495 Rahnella sp. Y9602 10214489 YP_004214182.1 CDS Rahaq_3463 NC_015061.1 3743488 3743970 D PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: cro:ROD_47491 component IIA of galactitol-specific phosphotransferase system; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 3743488..3743970 Rahnella sp. Y9602 10214490 YP_004214183.1 CDS Rahaq_3464 NC_015061.1 3744046 3744330 D KEGG: ctu:Ctu_04370 PTS system galactitol-specific transporter subunit IIB; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; Protein-N(pi)-phosphohistidine--sugar phosphotransferase 3744046..3744330 Rahnella sp. Y9602 10214491 YP_004214184.1 CDS Rahaq_3465 NC_015061.1 3744334 3745701 D KEGG: set:SEN3095 PTS system, galactitol-specific IIC component; TIGRFAM: PTS system, galactitol-specific IIC subunit; PFAM: PTS system Galactitol-specific IIC component; PTS system galactitol-specific transporter subunit IIC 3744334..3745701 Rahnella sp. Y9602 10214492 YP_004214185.1 CDS Rahaq_3466 NC_015061.1 3745748 3746797 D PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: kpn:KPN_03551 galactitol-1-phosphate dehydrogenase; molecular chaperone GroES 3745748..3746797 Rahnella sp. Y9602 10214493 YP_004214186.1 CDS Rahaq_3467 NC_015061.1 3746802 3747656 D TIGRFAM: class II aldolase, tagatose bisphosphate family; ketose-bisphosphate aldolase; KEGG: spe:Spro_2579 tagatose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; tagatose bisphosphate family class II aldolase 3746802..3747656 Rahnella sp. Y9602 10214494 YP_004214187.1 CDS Rahaq_3468 NC_015061.1 3747778 3748482 D PFAM: GCN5-related N-acetyltransferase; KEGG: bav:BAV1624 acetyltransferase; N-acetyltransferase GCN5 3747778..3748482 Rahnella sp. Y9602 10214495 YP_004214188.1 CDS Rahaq_3469 NC_015061.1 3748536 3749069 R PFAM: GCN5-related N-acetyltransferase; KEGG: ara:Arad_2738 phosphinothricin acetyltransferase (antibiotic resistance) protein; N-acetyltransferase GCN5 complement(3748536..3749069) Rahnella sp. Y9602 10214496 YP_004214189.1 CDS Rahaq_3470 NC_015061.1 3749123 3750220 R TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Ada metal-binding domain-containing protein; helix-turn-helix- domain containing protein AraC type; methylguanine DNA methyltransferase ribonuclease domain protein; methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: pct:PC1_0793 transcriptional regulator, AraC family; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(3749123..3750220) Rahnella sp. Y9602 10214497 YP_004214190.1 CDS Rahaq_3471 NC_015061.1 3750317 3750838 R PFAM: GCN5-related N-acetyltransferase; KEGG: xca:xccb100_3920 N-acetyltransferase; N-acetyltransferase GCN5 complement(3750317..3750838) Rahnella sp. Y9602 10214498 YP_004214191.1 CDS Rahaq_3472 NC_015061.1 3750925 3751479 D KEGG: vap:Vapar_2210 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 3750925..3751479 Rahnella sp. Y9602 10214499 YP_004214192.1 CDS Rahaq_3473 NC_015061.1 3751463 3753148 R PFAM: peptidase M28; KEGG: sti:Sthe_2595 peptidase M28; peptidase M28 complement(3751463..3753148) Rahnella sp. Y9602 10214500 YP_004214193.1 CDS Rahaq_3474 NC_015061.1 3753151 3753945 R KEGG: ebi:EbC_02780 conserved uncharacterized protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein complement(3753151..3753945) Rahnella sp. Y9602 10214501 YP_004214194.1 CDS Rahaq_3475 NC_015061.1 3753988 3755190 R KEGG: ebi:EbC_02790 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase dimerisation domain protein; peptidase M20; amidohydrolase complement(3753988..3755190) Rahnella sp. Y9602 10214502 YP_004214195.1 CDS Rahaq_3476 NC_015061.1 3755386 3756255 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebi:EbC_02800 LysR family transcriptional regulator; LysR family transcriptional regulator 3755386..3756255 Rahnella sp. Y9602 10214503 YP_004214196.1 CDS Rahaq_3477 NC_015061.1 3756256 3757137 R KEGG: pct:PC1_2754 phenazine biosynthesis protein PhzF family; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; phenazine biosynthesis protein PhzF family protein complement(3756256..3757137) Rahnella sp. Y9602 10214504 YP_004214197.1 CDS Rahaq_3478 NC_015061.1 3757293 3758585 D KEGG: spe:Spro_0025 L-lysine 6-monooxygenase (NADPH); L-lysine 6-monooxygenase 3757293..3758585 Rahnella sp. Y9602 10214505 YP_004214198.1 CDS Rahaq_3479 NC_015061.1 3758647 3759297 R KEGG: spe:Spro_3900 hemolysin III family channel protein; TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; hemolysin III family channel protein complement(3758647..3759297) Rahnella sp. Y9602 10214506 YP_004214199.1 CDS Rahaq_3480 NC_015061.1 3759636 3760244 D KEGG: spe:Spro_3901 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 3759636..3760244 Rahnella sp. Y9602 10214507 YP_004214200.1 CDS Rahaq_3481 NC_015061.1 3760289 3761596 R PFAM: extracellular solute-binding protein family 1; KEGG: ddd:Dda3937_02271 ABC transporter periplasmic binding protein; extracellular solute-binding protein complement(3760289..3761596) Rahnella sp. Y9602 10214508 YP_004214201.1 CDS Rahaq_3482 NC_015061.1 3761589 3762698 R KEGG: pct:PC1_0630 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter complement(3761589..3762698) Rahnella sp. Y9602 10214509 YP_004214202.1 CDS Rahaq_3483 NC_015061.1 3762695 3763522 R PFAM: metallophosphoesterase; KEGG: dda:Dd703_3268 metallophosphoesterase; metallophosphoesterase complement(3762695..3763522) Rahnella sp. Y9602 10214510 YP_004214203.1 CDS Rahaq_3484 NC_015061.1 3763534 3764433 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pwa:Pecwa_0842 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(3763534..3764433) Rahnella sp. Y9602 10214511 YP_004214204.1 CDS Rahaq_3485 NC_015061.1 3764423 3765295 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pct:PC1_0627 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(3764423..3765295) Rahnella sp. Y9602 10214512 YP_004214205.1 CDS Rahaq_3486 NC_015061.1 3765458 3765859 R KEGG: enc:ECL_02156 hypothetical protein; hypothetical protein complement(3765458..3765859) Rahnella sp. Y9602 10214513 YP_004214206.1 CDS Rahaq_3487 NC_015061.1 3766123 3766443 R KEGG: pct:PC1_0400 hypothetical protein; hypothetical protein complement(3766123..3766443) Rahnella sp. Y9602 10214514 YP_004214207.1 CDS Rahaq_3488 NC_015061.1 3766939 3767871 R PFAM: PfkB domain protein; KEGG: pwa:Pecwa_3718 ribokinase; PfkB domain-containing protein complement(3766939..3767871) Rahnella sp. Y9602 10214515 YP_004214208.1 CDS Rahaq_3489 NC_015061.1 3767868 3768812 R PFAM: ROK family protein; KEGG: pam:PANA_2791 AlsK; ROK family protein complement(3767868..3768812) Rahnella sp. Y9602 10214516 YP_004214209.1 CDS Rahaq_3490 NC_015061.1 3768828 3769508 R KEGG: pwa:Pecwa_3720 allulose-6-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; Ribulose-phosphate 3-epimerase complement(3768828..3769508) Rahnella sp. Y9602 10214517 YP_004214210.1 CDS Rahaq_3491 NC_015061.1 3769547 3770632 R PFAM: inner-membrane translocator; KEGG: pwa:Pecwa_3721 inner-membrane translocator; inner-membrane translocator complement(3769547..3770632) Rahnella sp. Y9602 10214518 YP_004214211.1 CDS Rahaq_3492 NC_015061.1 3770644 3771633 R PFAM: inner-membrane translocator; KEGG: pwa:Pecwa_3722 inner-membrane translocator; inner-membrane translocator complement(3770644..3771633) Rahnella sp. Y9602 10214519 YP_004214212.1 CDS Rahaq_3493 NC_015061.1 3771626 3773158 R KEGG: pwa:Pecwa_3723 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(3771626..3773158) Rahnella sp. Y9602 10214520 YP_004214213.1 CDS Rahaq_3494 NC_015061.1 3773161 3774147 R KEGG: pwa:Pecwa_3724 carbohydrate ABC transporter periplasmic-binding protein; carbohydrate ABC transporter periplasmic-binding protein complement(3773161..3774147) Rahnella sp. Y9602 10214521 YP_004214214.1 CDS Rahaq_3495 NC_015061.1 3774166 3775023 R KEGG: pam:PANA_2786 YulB; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator complement(3774166..3775023) Rahnella sp. Y9602 10214522 YP_004214215.1 CDS Rahaq_3496 NC_015061.1 3775355 3776098 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: spe:Spro_3909 hypothetical protein; short-chain dehydrogenase/reductase SDR complement(3775355..3776098) Rahnella sp. Y9602 10214523 YP_004214216.1 CDS Rahaq_3497 NC_015061.1 3776350 3779223 R KEGG: spe:Spro_3914 glycine dehydrogenase; TIGRFAM: glycine dehydrogenase; PFAM: Glycine cleavage system P-protein-like; glycine dehydrogenase complement(3776350..3779223) Rahnella sp. Y9602 10214524 YP_004214217.1 CDS Rahaq_3498 NC_015061.1 3779333 3779719 R KEGG: spe:Spro_3915 glycine cleavage system H protein; TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; glycine cleavage system H protein complement(3779333..3779719) Rahnella sp. Y9602 10214525 YP_004214218.1 CDS Rahaq_3499 NC_015061.1 3779783 3780880 R KEGG: spe:Spro_3916 glycine cleavage system aminomethyltransferase T; TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; glycine cleavage system T protein complement(3779783..3780880) Rahnella sp. Y9602 10214526 YP_004214219.1 CDS Rahaq_3500 NC_015061.1 3781333 3782559 R KEGG: spe:Spro_3917 hypothetical protein; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase complement(3781333..3782559) Rahnella sp. Y9602 10214527 YP_004214220.1 CDS Rahaq_3501 NC_015061.1 3782577 3783755 R manually curated; TIGRFAM: 2-polyprenyl-6-methoxyphenol 4-hydroxylase; Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; KEGG: ypi:YpsIP31758_0861 2-octaprenyl-6-methoxyphenyl hydroxylase; PFAM: FAD dependent oxidoreductase; 2-polyprenyl-6-methoxyphenol 4-hydroxylase complement(3782577..3783755) Rahnella sp. Y9602 10214528 YP_004214221.1 CDS Rahaq_3502 NC_015061.1 3783757 3785073 R PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: ypb:YPTS_3317 proline aminopeptidase P II; peptidase M24 complement(3783757..3785073) Rahnella sp. Y9602 10214529 YP_004214222.1 CDS Rahaq_3503 NC_015061.1 3785132 3785710 R KEGG: spe:Spro_3920 hypothetical protein; TIGRFAM: yecA family protein; PFAM: Uncharacterised protein family UPF0149 (YgfB); hypothetical protein complement(3785132..3785710) Rahnella sp. Y9602 10214530 YP_004214223.1 CDS Rahaq_3504 NC_015061.1 3785958 3786287 D PFAM: protein of unknown function DUF710; KEGG: yen:YE3398 Z-ring-associated protein; hypothetical protein 3785958..3786287 Rahnella sp. Y9602 10214531 YP_004214224.1 CDS Rahaq_3505 NC_015061.1 3786528 3787154 D manually curated; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: spe:Spro_3922 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 3786528..3787154 Rahnella sp. Y9602 10214533 YP_004214225.1 CDS Rahaq_3506 NC_015061.1 3787426 3787836 D KEGG: ebi:EbC_19960 hypothetical protein; hypothetical protein 3787426..3787836 Rahnella sp. Y9602 10214534 YP_004214226.1 CDS Rahaq_3507 NC_015061.1 3788148 3789386 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; KEGG: epy:EpC_29500 D-3-phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(3788148..3789386) Rahnella sp. Y9602 10214535 YP_004214227.1 CDS Rahaq_3508 NC_015061.1 3789737 3790399 R TIGRFAM: ribose 5-phosphate isomerase; KEGG: spe:Spro_3924 ribose-5-phosphate isomerase A; PFAM: Ribose 5-phosphate isomerase; ribose 5-phosphate isomerase complement(3789737..3790399) Rahnella sp. Y9602 10214536 YP_004214228.1 CDS Rahaq_3509 NC_015061.1 3790627 3791529 D KEGG: spe:Spro_3925 chromosome replication initiation inhibitor protein; TIGRFAM: transcriptional regulator, ArgP family; PFAM: regulatory protein LysR; LysR substrate-binding; LysR family transcriptional regulator 3790627..3791529 Rahnella sp. Y9602 10214537 YP_004214229.1 CDS Rahaq_3510 NC_015061.1 3791558 3792451 R KEGG: bgf:BC1003_4236 LysR family transcriptional regulator; manually curated; PFAM: LysR substrate-binding; regulatory protein LysR; LysR family transcriptional regulator complement(3791558..3792451) Rahnella sp. Y9602 10214538 YP_004214230.1 CDS Rahaq_3511 NC_015061.1 3792573 3793415 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_4237 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3792573..3793415 Rahnella sp. Y9602 10214539 YP_004214231.1 CDS Rahaq_3512 NC_015061.1 3793473 3794219 R PFAM: protein of unknown function DUF541; KEGG: spe:Spro_3926 hypothetical protein; hypothetical protein complement(3793473..3794219) Rahnella sp. Y9602 10214540 YP_004214232.1 CDS Rahaq_3513 NC_015061.1 3794323 3794940 R KEGG: spe:Spro_3927 arginine exporter protein; TIGRFAM: L-lysine exporter; PFAM: lysine exporter protein (LYSE/YGGA); L-lysine exporter complement(3794323..3794940) Rahnella sp. Y9602 10214541 YP_004214233.1 CDS Rahaq_3514 NC_015061.1 3795122 3796009 R PFAM: MscS Mechanosensitive ion channel; Conserved TM helix repeat-containing protein; KEGG: ypb:YPTS_3326 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS complement(3795122..3796009) Rahnella sp. Y9602 10214542 YP_004214234.1 CDS Rahaq_3515 NC_015061.1 3796146 3797414 R TIGRFAM: oligosaccharide/H+ symporter, major facilitator superfamily (MFS); KEGG: eca:ECA1489 galactoside permease; oligosaccharide/H+ symporter, major facilitator superfamily (MFS) complement(3796146..3797414) Rahnella sp. Y9602 10214543 YP_004214235.1 CDS Rahaq_3516 NC_015061.1 3797475 3800573 R PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 42 domain 5 loop region; KEGG: spe:Spro_3173 beta-D-galactosidase; glycoside hydrolase complement(3797475..3800573) Rahnella sp. Y9602 10214544 YP_004214236.1 CDS Rahaq_3517 NC_015061.1 3800708 3801790 R KEGG: dze:Dd1591_2732 lac repressor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator complement(3800708..3801790) Rahnella sp. Y9602 10214545 YP_004214237.1 CDS Rahaq_3518 NC_015061.1 3801927 3803006 R KEGG: yen:YE3413 fructose-bisphosphate aldolase; TIGRFAM: fructose-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; fructose-bisphosphate aldolase complement(3801927..3803006) Rahnella sp. Y9602 10214546 YP_004214238.1 CDS Rahaq_3519 NC_015061.1 3803136 3804299 R KEGG: dda:Dd703_0554 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; phosphoglycerate kinase complement(3803136..3804299) Rahnella sp. Y9602 10214547 YP_004214239.1 CDS Rahaq_3520 NC_015061.1 3804372 3805388 R TIGRFAM: D-erythrose-4-phosphate dehydrogenase; KEGG: yen:YE3415 erythrose 4-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; D-erythrose-4-phosphate dehydrogenase complement(3804372..3805388) Rahnella sp. Y9602 10214548 YP_004214240.1 CDS Rahaq_3521 NC_015061.1 3805889 3807883 R KEGG: spe:Spro_3954 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain-containing protein; Transketolase central region; transketolase complement(3805889..3807883) Rahnella sp. Y9602 10214549 YP_004214241.1 CDS Rahaq_3522 NC_015061.1 3808132 3808884 D PFAM: peptidase M48 Ste24p; KEGG: spe:Spro_3955 peptidase M48 Ste24p; peptidase M48 Ste24p 3808132..3808884 Rahnella sp. Y9602 10214550 YP_004214242.1 CDS Rahaq_3523 NC_015061.1 3809439 3810026 D PFAM: Fimbrial protein domain-containing protein; KEGG: enc:ECL_00942 hypothetical protein; fimbrial protein domain-containing protein 3809439..3810026 Rahnella sp. Y9602 10214551 YP_004214243.1 CDS Rahaq_3524 NC_015061.1 3810107 3810841 D PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: enc:ECL_00941 chaperone protein EcpD; Pili assembly chaperone, N-terminal protein 3810107..3810841 Rahnella sp. Y9602 10214552 YP_004214244.1 CDS Rahaq_3525 NC_015061.1 3810882 3813518 D PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: enc:ECL_00940 fimbrial usher protein; fimbrial biogenesis outer membrane usher protein 3810882..3813518 Rahnella sp. Y9602 10214553 YP_004214245.1 CDS Rahaq_3526 NC_015061.1 3813553 3814131 D PFAM: Fimbrial protein domain-containing protein; KEGG: enc:ECL_00939 fimbrial protein; fimbrial protein domain-containing protein 3813553..3814131 Rahnella sp. Y9602 10214554 YP_004214246.1 CDS Rahaq_3527 NC_015061.1 3814177 3814746 D PFAM: Fimbrial protein domain-containing protein; KEGG: enc:ECL_00938 fimbrial protein; fimbrial protein domain-containing protein 3814177..3814746 Rahnella sp. Y9602 10214555 YP_004214247.1 CDS Rahaq_3528 NC_015061.1 3814776 3815378 D PFAM: Fimbrial protein domain-containing protein; KEGG: seh:SeHA_C0206 fimbrial protein; fimbrial protein domain-containing protein 3814776..3815378 Rahnella sp. Y9602 10214556 YP_004214248.1 CDS Rahaq_3529 NC_015061.1 3815371 3816495 D PFAM: Fimbrial protein domain-containing protein; KEGG: enc:ECL_00936 hypothetical protein; fimbrial protein domain-containing protein 3815371..3816495 Rahnella sp. Y9602 10214557 YP_004214249.1 CDS Rahaq_3530 NC_015061.1 3816567 3818549 R KEGG: spe:Spro_3973 arginine decarboxylase; TIGRFAM: arginine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; arginine decarboxylase complement(3816567..3818549) Rahnella sp. Y9602 10214558 YP_004214250.1 CDS Rahaq_3531 NC_015061.1 3819430 3820581 D TIGRFAM: S-adenosylmethionine synthetase; KEGG: ebi:EbC_36630 S-adenosylmethionine synthetase (methionine adenosyltransferase); PFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthetase 3819430..3820581 Rahnella sp. Y9602 10214559 YP_004214251.1 CDS Rahaq_3532 NC_015061.1 3821098 3821841 D KEGG: ebi:EbC_44770 fimbrial protein; hypothetical protein 3821098..3821841 Rahnella sp. Y9602 10214560 YP_004214252.1 CDS Rahaq_3533 NC_015061.1 3821922 3822425 D KEGG: ebi:EbC_44780 CS1 type fimbrial major subunit; CS1 type fimbrial major subunit 3821922..3822425 Rahnella sp. Y9602 10214561 YP_004214253.1 CDS Rahaq_3534 NC_015061.1 3822514 3825207 D KEGG: ebi:EbC_44790 outer membrane fimbrial usher protein; outer membrane fimbrial usher protein 3822514..3825207 Rahnella sp. Y9602 10214562 YP_004214254.1 CDS Rahaq_3535 NC_015061.1 3825204 3826328 D PFAM: CblD family pilus biogenesis initiator protein; KEGG: spe:Spro_0214 CblD family pilus biogenesis initiator protein; CblD family pilus biogenesis initiator protein 3825204..3826328 Rahnella sp. Y9602 10214563 YP_004214255.1 CDS Rahaq_3536 NC_015061.1 3826341 3827495 D PFAM: CblD family pilus biogenesis initiator protein; KEGG: spe:Spro_0214 CblD family pilus biogenesis initiator protein; CblD family pilus biogenesis initiator protein 3826341..3827495 Rahnella sp. Y9602 10214564 YP_004214256.1 CDS Rahaq_3537 NC_015061.1 3827517 3828260 D KEGG: eck:EC55989_3511 fimbrial protein; fimbrial protein 3827517..3828260 Rahnella sp. Y9602 10214565 YP_004214257.1 CDS Rahaq_3538 NC_015061.1 3828569 3829963 D TIGRFAM: sugar transporter; KEGG: spe:Spro_1160 sugar transporter; sugar transporter 3828569..3829963 Rahnella sp. Y9602 10214566 YP_004214258.1 CDS Rahaq_3539 NC_015061.1 3830018 3830575 D SMART: protein of unknown function SprT; KEGG: yen:YE3424 hypothetical protein; hypothetical protein 3830018..3830575 Rahnella sp. Y9602 10214567 YP_004214259.1 CDS Rahaq_3540 NC_015061.1 3830669 3831382 D KEGG: ecm:EcSMS35_3087 endonuclease I; PFAM: Endonuclease I; Deoxyribonuclease I 3830669..3831382 Rahnella sp. Y9602 10214568 YP_004214260.1 CDS Rahaq_3541 NC_015061.1 3831470 3832201 D PFAM: protein of unknown function DUF558; KEGG: spe:Spro_4025 hypothetical protein; hypothetical protein 3831470..3832201 Rahnella sp. Y9602 10214569 YP_004214261.1 CDS Rahaq_3542 NC_015061.1 3832213 3833163 D TIGRFAM: glutathione synthetase; KEGG: ddd:Dda3937_00424 glutathione synthetase; PFAM: glutathione synthetase ATP-binding; glutathione synthetase domain protein; glutathione synthetase 3832213..3833163 Rahnella sp. Y9602 10214570 YP_004214262.1 CDS Rahaq_3543 NC_015061.1 3833292 3833855 D PFAM: protein of unknown function DUF179; KEGG: spe:Spro_4027 hypothetical protein; hypothetical protein 3833292..3833855 Rahnella sp. Y9602 10214571 YP_004214263.1 CDS Rahaq_3544 NC_015061.1 3833855 3834283 D KEGG: pwa:Pecwa_3911 Holliday junction resolvase-like protein; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; Holliday junction resolvase YqgF 3833855..3834283 Rahnella sp. Y9602 10214572 YP_004214264.1 CDS Rahaq_3545 NC_015061.1 3834274 3835296 R KEGG: spe:Spro_4029 twitching motility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; twitching motility protein complement(3834274..3835296) Rahnella sp. Y9602 10214573 YP_004214265.1 CDS Rahaq_3546 NC_015061.1 3835319 3836038 D PFAM: alanine racemase domain protein; KEGG: spe:Spro_4030 alanine racemase domain-containing protein; alanine racemase 3835319..3836038 Rahnella sp. Y9602 10214574 YP_004214266.1 CDS Rahaq_3547 NC_015061.1 3836111 3836932 D TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: spe:Spro_4031 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; pyrroline-5-carboxylate reductase 3836111..3836932 Rahnella sp. Y9602 10214575 YP_004214267.1 CDS Rahaq_3548 NC_015061.1 3837019 3837573 D PFAM: protein of unknown function YGGT; KEGG: yen:YE3435 hypothetical protein; hypothetical protein 3837019..3837573 Rahnella sp. Y9602 10214576 YP_004214268.1 CDS Rahaq_3549 NC_015061.1 3837558 3837863 D PFAM: protein of unknown function DUF167; KEGG: cro:ROD_50331 hypothetical protein; hypothetical protein 3837558..3837863 Rahnella sp. Y9602 10214577 YP_004214269.1 CDS Rahaq_3550 NC_015061.1 3837885 3838493 D KEGG: spe:Spro_4034 deoxyribonucleotide triphosphate pyrophosphatase; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 3837885..3838493 Rahnella sp. Y9602 10214578 YP_004214270.1 CDS Rahaq_3551 NC_015061.1 3838486 3839622 D TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; KEGG: ebi:EbC_36750 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 3838486..3839622 Rahnella sp. Y9602 10214579 YP_004214271.1 CDS Rahaq_3552 NC_015061.1 3839704 3840438 R KEGG: ebi:EbC_36760 conserved uncharacterized protein; hypothetical protein complement(3839704..3840438) Rahnella sp. Y9602 10214580 YP_004214272.1 CDS Rahaq_3553 NC_015061.1 3840463 3841389 R TIGRFAM: Glutaminase, core; KEGG: etr:ETAE_0268 glutaminase; PFAM: Glutaminase, core; glutaminase complement(3840463..3841389) Rahnella sp. Y9602 10214581 YP_004214273.1 CDS Rahaq_3554 NC_015061.1 3841582 3841908 R PFAM: protein of unknown function DUF469; KEGG: enc:ECL_04286 hypothetical protein; hypothetical protein complement(3841582..3841908) Rahnella sp. Y9602 10214582 YP_004214274.1 CDS Rahaq_3555 NC_015061.1 3841908 3842627 R KEGG: spe:Spro_4042 tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: methyltransferase; tRNA (guanine-N(7)-)-methyltransferase complement(3841908..3842627) Rahnella sp. Y9602 10214583 YP_004214275.1 CDS Rahaq_3556 NC_015061.1 3842851 3843927 D TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; KEGG: spe:Spro_4043 adenine DNA glycosylase; SMART: HhH-GPD family protein; iron-sulfur cluster loop; A/G-specific adenine glycosylase 3842851..3843927 Rahnella sp. Y9602 10214584 YP_004214276.1 CDS Rahaq_3557 NC_015061.1 3843961 3844233 D PFAM: Fe(II) trafficking protein YggX; KEGG: ypb:YPTS_3359 hypothetical protein; Fe(II) trafficking protein YggX 3843961..3844233 Rahnella sp. Y9602 10214585 YP_004214277.1 CDS Rahaq_3558 NC_015061.1 3844310 3845389 D PFAM: lytic transglycosylase catalytic; KEGG: spe:Spro_4045 murein transglycosylase C; lytic transglycosylase 3844310..3845389 Rahnella sp. Y9602 10214586 YP_004214278.1 CDS Rahaq_3559 NC_015061.1 3845438 3846571 R PFAM: glycosyl transferase group 1; KEGG: pmr:PMI3190 glycosyl transferase; group 1 glycosyl transferase complement(3845438..3846571) Rahnella sp. Y9602 10214587 YP_004214279.1 CDS Rahaq_3560 NC_015061.1 3846613 3847617 R KEGG: fba:FIC_01937 hypothetical protein; hypothetical protein complement(3846613..3847617) Rahnella sp. Y9602 10214588 YP_004214280.1 CDS Rahaq_3561 NC_015061.1 3847619 3848803 R PFAM: glycosyl transferase group 1; KEGG: gwc:GWCH70_3261 glycosyl transferase group 1; group 1 glycosyl transferase complement(3847619..3848803) Rahnella sp. Y9602 10214589 YP_004214281.1 CDS Rahaq_3562 NC_015061.1 3848800 3849381 R KEGG: mcl:MCCL_0673 hypothetical protein; hypothetical protein complement(3848800..3849381) Rahnella sp. Y9602 10214590 YP_004214282.1 CDS Rahaq_3563 NC_015061.1 3849374 3850459 R PFAM: glycosyl transferase group 1; KEGG: spn:SP_0353 capsular polysaccharide biosynthesis protein Cps4H; group 1 glycosyl transferase complement(3849374..3850459) Rahnella sp. Y9602 10214591 YP_004214283.1 CDS Rahaq_3564 NC_015061.1 3850446 3851669 R KEGG: pjd:Pjdr2_0357 hypothetical protein; hypothetical protein complement(3850446..3851669) Rahnella sp. Y9602 10214592 YP_004214284.1 CDS Rahaq_3565 NC_015061.1 3851677 3852894 R PFAM: polysaccharide biosynthesis protein; KEGG: enc:ECL_03359 lipopolysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(3851677..3852894) Rahnella sp. Y9602 10214593 YP_004214285.1 CDS Rahaq_3566 NC_015061.1 3852998 3855148 R TIGRFAM: capsular exopolysaccharide family; KEGG: ctu:Ctu_27570 tyrosine kinase; PFAM: lipopolysaccharide biosynthesis protein; capsular exopolysaccharide family protein complement(3852998..3855148) Rahnella sp. Y9602 10214594 YP_004214286.1 CDS Rahaq_3567 NC_015061.1 3855145 3855594 R manually curated; PFAM: Protein-tyrosine phosphatase, low molecular weight; KEGG: spe:Spro_1584 protein tyrosine phosphatase; SMART: Protein-tyrosine phosphatase, low molecular weight; protein tyrosine phosphatase complement(3855145..3855594) Rahnella sp. Y9602 10214595 YP_004214287.1 CDS Rahaq_3568 NC_015061.1 3855601 3856731 R KEGG: kva:Kvar_1551 polysaccharide export protein; manually curated; PFAM: polysaccharide export protein; Soluble ligand binding domain; polysaccharide export protein complement(3855601..3856731) Rahnella sp. Y9602 10214596 YP_004214288.1 CDS Rahaq_3569 NC_015061.1 3857042 3858115 R KEGG: etr:ETAE_0101 UDP-N-acetylmuramyl pentapeptide phosphotransferase; TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; PFAM: Glycosyl transferase, family 4, conserved region; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase complement(3857042..3858115) Rahnella sp. Y9602 10214597 YP_004214289.1 CDS Rahaq_3570 NC_015061.1 3858477 3860639 R KEGG: spe:Spro_4047 ornithine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; Ornithine decarboxylase complement(3858477..3860639) Rahnella sp. Y9602 10214598 YP_004214290.1 CDS Rahaq_3571 NC_015061.1 3861708 3863024 R PFAM: major facilitator superfamily MFS_1; KEGG: ddd:Dda3937_00340 D-galactonate transporter; major facilitator superfamily protein complement(3861708..3863024) Rahnella sp. Y9602 10214600 YP_004214291.1 CDS Rahaq_3572 NC_015061.1 3863037 3863690 R PFAM: Conserved hypothetical protein CHP00022; KEGG: pwa:Pecwa_4126 hypothetical protein; hypothetical protein complement(3863037..3863690) Rahnella sp. Y9602 10214601 YP_004214292.1 CDS Rahaq_3573 NC_015061.1 3863707 3864636 R PFAM: dihydrodipicolinate synthetase; KEGG: dda:Dd703_0301 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase complement(3863707..3864636) Rahnella sp. Y9602 10214602 YP_004214293.1 CDS Rahaq_3574 NC_015061.1 3864731 3865945 R TIGRFAM: ribokinase; PFAM: PfkB domain protein; regulatory protein DeoR; KEGG: ddd:Dda3937_00343 ribokinase; SMART: regulatory protein DeoR; ribokinase complement(3864731..3865945) Rahnella sp. Y9602 10214603 YP_004214294.1 CDS Rahaq_3575 NC_015061.1 3866231 3866992 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: cro:ROD_07901 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 3866231..3866992 Rahnella sp. Y9602 10214604 YP_004214295.1 CDS Rahaq_3576 NC_015061.1 3866989 3868236 D KEGG: cko:CKO_02338 cardiolipin synthase 2; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; phospholipase D/Transphosphatidylase 3866989..3868236 Rahnella sp. Y9602 10214605 YP_004214296.1 CDS Rahaq_3577 NC_015061.1 3868236 3869198 D KEGG: sea:SeAg_B0846 inner membrane protein YbhN; inner membrane protein YbhN 3868236..3869198 Rahnella sp. Y9602 10214606 YP_004214297.1 CDS Rahaq_3578 NC_015061.1 3869210 3870514 R KEGG: spe:Spro_1916 Mn2+/Fe2+ transporter; TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; NRAMP family Mn2+/Fe2+ transporter complement(3869210..3870514) Rahnella sp. Y9602 10214607 YP_004214298.1 CDS Rahaq_3579 NC_015061.1 3871057 3872664 D KEGG: bpr:GBP346_A2028 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3871057..3872664 Rahnella sp. Y9602 10214608 YP_004214299.1 CDS Rahaq_3580 NC_015061.1 3872674 3873687 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: vap:Vapar_3354 periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator 3872674..3873687 Rahnella sp. Y9602 10214609 YP_004214300.1 CDS Rahaq_3582 NC_015061.1 3875406 3877370 D PFAM: acyltransferase 3; KEGG: ebi:EbC_09730 acyltransferase family protein; acyltransferase 3875406..3877370 Rahnella sp. Y9602 10214611 YP_004214301.1 CDS Rahaq_3583 NC_015061.1 3877782 3879005 R KEGG: nam:NAMH_1656 O-antigen polymerase family; hypothetical protein complement(3877782..3879005) Rahnella sp. Y9602 10214612 YP_004214302.1 CDS Rahaq_3584 NC_015061.1 3879110 3880480 D KEGG: ccb:Clocel_2983 fibronectin type III domain-containing protein; hypothetical protein 3879110..3880480 Rahnella sp. Y9602 10214613 YP_004214303.1 CDS Rahaq_3585 NC_015061.1 3880561 3881565 R PFAM: acyltransferase 3; KEGG: vvu:VV2_1626 hypothetical protein; acyltransferase complement(3880561..3881565) Rahnella sp. Y9602 10214614 YP_004214304.1 CDS Rahaq_3586 NC_015061.1 3881727 3882761 D PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ppr:PBPRB1640 hypothetical protein; transposase IS116/IS110/IS902 family protein 3881727..3882761 Rahnella sp. Y9602 10214615 YP_004214305.1 CDS Rahaq_3588 NC_015061.1 3883820 3884908 R KEGG: kpu:KP1_3711 GDP-D-mannose dehydratase; PFAM: NAD-dependent epimerase/dehydratase; GDP-mannose 4,6-dehydratase complement(3883820..3884908) Rahnella sp. Y9602 10214617 YP_004214306.1 CDS Rahaq_3589 NC_015061.1 3885060 3886499 R PFAM: polysaccharide biosynthesis protein; KEGG: kpn:KPN_02500 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(3885060..3886499) Rahnella sp. Y9602 10214618 YP_004214307.1 CDS Rahaq_3590 NC_015061.1 3886669 3887823 R PFAM: glycosyl transferase group 1; KEGG: see:SNSL254_A2264 glycosyl transferase, group 1; group 1 glycosyl transferase complement(3886669..3887823) Rahnella sp. Y9602 10214619 YP_004214308.1 CDS Rahaq_3591 NC_015061.1 3887909 3889288 R PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: ecr:ECIAI1_2103 phosphomannomutase (PMM); phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II complement(3887909..3889288) Rahnella sp. Y9602 10214620 YP_004214309.1 CDS Rahaq_3592 NC_015061.1 3889303 3890724 R TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: sgl:SG1114 mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase; mannose-6-phosphate isomerase type II; mannose-1-phosphate guanylyltransferase complement(3889303..3890724) Rahnella sp. Y9602 10214621 YP_004214310.1 CDS Rahaq_3593 NC_015061.1 3890875 3892098 R PFAM: glycosyl transferase group 1; KEGG: eta:ETA_13310 exopolysaccharide biosynthesis glycosyl transferase; group 1 glycosyl transferase complement(3890875..3892098) Rahnella sp. Y9602 10214622 YP_004214311.1 CDS Rahaq_3594 NC_015061.1 3892314 3893309 R PFAM: glycosyl transferase group 1; KEGG: see:SNSL254_A2265 second mannosyl transferase; group 1 glycosyl transferase complement(3892314..3893309) Rahnella sp. Y9602 10214623 YP_004214312.1 CDS Rahaq_3595 NC_015061.1 3893324 3894481 R PFAM: glycosyl transferase group 1; KEGG: bcx:BCA_5415 glycosyl transferase, group 1 family protein; group 1 glycosyl transferase complement(3893324..3894481) Rahnella sp. Y9602 10214624 YP_004214313.1 CDS Rahaq_3596 NC_015061.1 3894654 3896825 R TIGRFAM: capsular exopolysaccharide family; KEGG: spe:Spro_1585 non-specific protein-tyrosine kinase; PFAM: lipopolysaccharide biosynthesis protein; capsular exopolysaccharide family protein complement(3894654..3896825) Rahnella sp. Y9602 10214625 YP_004214314.1 CDS Rahaq_3597 NC_015061.1 3896846 3897280 R KEGG: spe:Spro_1584 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; protein tyrosine phosphatase complement(3896846..3897280) Rahnella sp. Y9602 10214626 YP_004214315.1 CDS Rahaq_3598 NC_015061.1 3897283 3898425 R PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: kpu:KP1_3720 capsule polysaccharide export protein precursor; polysaccharide export protein complement(3897283..3898425) Rahnella sp. Y9602 10214627 YP_004214316.1 CDS Rahaq_3599 NC_015061.1 3898514 3899944 R TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase, WbaP; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: ecx:EcHS_A2190 sugar transferase; PFAM: sugar transferase; Undecaprenyl-phosphate galactose phosphotransferase, WbaP complement(3898514..3899944) Rahnella sp. Y9602 10214628 YP_004214317.1 CDS Rahaq_3600 NC_015061.1 3900115 3902208 R PFAM: protein of unknown function DUF940 membrane lipoprotein; KEGG: ebi:EbC_03020 conserved uncharacterized protein; hypothetical protein complement(3900115..3902208) Rahnella sp. Y9602 10214629 YP_004214318.1 CDS Rahaq_3601 NC_015061.1 3902205 3902948 R PFAM: protein of unknown function DUF1017; KEGG: pam:PANA_0243 YmcB; hypothetical protein complement(3902205..3902948) Rahnella sp. Y9602 10214630 YP_004214319.1 CDS Rahaq_3602 NC_015061.1 3902945 3903601 R KEGG: ebi:EbC_03000 lipoprotein YmcC; lipoprotein YmcC complement(3902945..3903601) Rahnella sp. Y9602 10214631 YP_004214320.1 CDS Rahaq_3603 NC_015061.1 3903676 3903891 R KEGG: pam:PANA_0245 YjbE; hypothetical protein complement(3903676..3903891) Rahnella sp. Y9602 10214632 YP_004214321.1 CDS Rahaq_3604 NC_015061.1 3904180 3904866 R KEGG: yen:YE1324 hypothetical protein; PFAM: EAL domain protein; SMART: EAL domain protein; diguanylate phosphodiesterase complement(3904180..3904866) Rahnella sp. Y9602 10214633 YP_004214322.1 CDS Rahaq_3605 NC_015061.1 3904941 3905537 R KEGG: ent:Ent638_0524 DNA-binding transcriptional activator BglJ; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; LuxR family transcriptional regulator complement(3904941..3905537) Rahnella sp. Y9602 10214634 YP_004214323.1 CDS Rahaq_3606 NC_015061.1 3905638 3905730 R hypothetical protein complement(3905638..3905730) Rahnella sp. Y9602 10214635 YP_004214324.1 CDS Rahaq_3607 NC_015061.1 3906525 3909236 R KEGG: ent:Ent638_2565 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; P-type HAD superfamily ATPase complement(3906525..3909236) Rahnella sp. Y9602 10214636 YP_004214325.1 CDS Rahaq_3608 NC_015061.1 3909527 3910612 D TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: kpe:KPK_A0100 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 3909527..3910612 Rahnella sp. Y9602 10214637 YP_004214326.1 CDS Rahaq_3609 NC_015061.1 3910612 3913677 D PFAM: acriflavin resistance protein; KEGG: ent:Ent638_2568 acriflavin resistance protein; acriflavin resistance protein 3910612..3913677 Rahnella sp. Y9602 10214638 YP_004214327.1 CDS Rahaq_3610 NC_015061.1 3913674 3914639 D KEGG: kpe:KPK_A0098 hypothetical protein; hypothetical protein 3913674..3914639 Rahnella sp. Y9602 10214639 YP_004214328.1 CDS Rahaq_3611 NC_015061.1 3914703 3914957 R KEGG: ses:SARI_03126 hypothetical protein; hypothetical protein complement(3914703..3914957) Rahnella sp. Y9602 10214640 YP_004214329.1 CDS Rahaq_3612 NC_015061.1 3915063 3915317 R KEGG: ses:SARI_03126 hypothetical protein; hypothetical protein complement(3915063..3915317) Rahnella sp. Y9602 10214641 YP_004214330.1 CDS Rahaq_3613 NC_015061.1 3915307 3915963 R KEGG: ses:SARI_03125 hypothetical protein; hypothetical protein complement(3915307..3915963) Rahnella sp. Y9602 10214642 YP_004214331.1 CDS Rahaq_3614 NC_015061.1 3916094 3916642 R KEGG: xne:XNC1_4392 DNA-binding protein; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(3916094..3916642) Rahnella sp. Y9602 10214643 YP_004214332.1 CDS Rahaq_3615 NC_015061.1 3916741 3917409 D PFAM: AzlC family protein; KEGG: pam:PANA_4178 AzlC; AzlC family protein 3916741..3917409 Rahnella sp. Y9602 10214644 YP_004214333.1 CDS Rahaq_3616 NC_015061.1 3917406 3917729 D PFAM: branched-chain amino acid transport; KEGG: pam:PANA_4177 hypothetical protein; branched-chain amino acid transport 3917406..3917729 Rahnella sp. Y9602 10214645 YP_004214334.1 CDS Rahaq_3617 NC_015061.1 3917780 3919141 R PFAM: amino acid permease-associated region; KEGG: sfv:SFV_2073 amino acid/amine transport protein; amino acid permease complement(3917780..3919141) Rahnella sp. Y9602 10214646 YP_004214335.1 CDS Rahaq_3618 NC_015061.1 3919749 3920555 D KEGG: pct:PC1_0650 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 3919749..3920555 Rahnella sp. Y9602 10214647 YP_004214336.1 CDS Rahaq_3619 NC_015061.1 3920542 3921180 R PFAM: lysine exporter protein (LYSE/YGGA); KEGG: eta:ETA_33760 transporter, LysE family; lysine exporter protein LysE/YggA complement(3920542..3921180) Rahnella sp. Y9602 10214648 YP_004214337.1 CDS Rahaq_3620 NC_015061.1 3921177 3922469 R KEGG: cwo:Cwoe_1009 hypothetical protein; hypothetical protein complement(3921177..3922469) Rahnella sp. Y9602 10214649 YP_004214338.1 CDS Rahaq_3621 NC_015061.1 3922625 3923284 D PFAM: protein of unknown function DUF1345; KEGG: pam:PANA_4078 hypothetical protein; hypothetical protein 3922625..3923284 Rahnella sp. Y9602 10214650 YP_004214339.1 CDS Rahaq_3622 NC_015061.1 3923439 3924257 D KEGG: ddc:Dd586_1102 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 3923439..3924257 Rahnella sp. Y9602 10214651 YP_004214340.1 CDS Rahaq_3623 NC_015061.1 3924257 3925081 D KEGG: dze:Dd1591_2999 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 3924257..3925081 Rahnella sp. Y9602 10214652 YP_004214341.1 CDS Rahaq_3624 NC_015061.1 3925126 3926268 D PFAM: aminotransferase class I and II; KEGG: sro:Sros_2228 aminotransferase protein; class I and II aminotransferase 3925126..3926268 Rahnella sp. Y9602 10214653 YP_004214342.1 CDS Rahaq_3625 NC_015061.1 3926357 3928141 R PFAM: glycoside hydrolase family 19; PKD domain containing protein; Carbohydrate-binding family V/XII; KEGG: cko:CKO_02215 hypothetical protein; SMART: Carbohydrate-binding family V/XII; PKD domain containing protein; chitinase complement(3926357..3928141) Rahnella sp. Y9602 10214654 YP_004214343.1 CDS Rahaq_3626 NC_015061.1 3928431 3928697 R KEGG: ctu:Ctu_06420 hypothetical protein; hypothetical protein complement(3928431..3928697) Rahnella sp. Y9602 10214655 YP_004214344.1 CDS Rahaq_3627 NC_015061.1 3928963 3929904 R PFAM: regulatory protein LysR; KEGG: sek:SSPA0013 regulatory protein; LysR family transcriptional regulator complement(3928963..3929904) Rahnella sp. Y9602 10214656 YP_004214345.1 CDS Rahaq_3628 NC_015061.1 3930047 3930589 R PFAM: Peptidoglycan binding domain; protein of unknown function DUF847; KEGG: ent:Ent638_1027 hypothetical protein; Peptidoglycan binding domain protein complement(3930047..3930589) Rahnella sp. Y9602 10214657 YP_004214346.1 CDS Rahaq_3629 NC_015061.1 3930612 3931058 R KEGG: esa:ESA_03319 hypothetical protein; CadC family transcriptional regulator complement(3930612..3931058) Rahnella sp. Y9602 10214658 YP_004214347.1 CDS Rahaq_3630 NC_015061.1 3931505 3933586 D PFAM: glycoside hydrolase family 18; Carbohydrate-binding family V/XII; KEGG: esa:ESA_03317 hypothetical protein; SMART: chitinase II; Carbohydrate-binding family V/XII; chitinase 3931505..3933586 Rahnella sp. Y9602 10214659 YP_004214348.1 CDS Rahaq_3631 NC_015061.1 3933648 3934544 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pfl:PFL_2915 LysR family transcriptional regulator; LysR family transcriptional regulator complement(3933648..3934544) Rahnella sp. Y9602 10214660 YP_004214349.1 CDS Rahaq_3632 NC_015061.1 3934662 3936158 D PFAM: major facilitator superfamily MFS_1; KEGG: bte:BTH_I3246 EmrB/QacA family drug resistance transporter; major facilitator superfamily protein 3934662..3936158 Rahnella sp. Y9602 10214661 YP_004214350.1 CDS Rahaq_3633 NC_015061.1 3936573 3937118 D PFAM: Spore coat protein U; KEGG: pag:PLES_50341 hypothetical protein; Spore coat protein U 3936573..3937118 Rahnella sp. Y9602 10214662 YP_004214351.1 CDS Rahaq_3634 NC_015061.1 3937181 3937699 D PFAM: Spore coat protein U; KEGG: pap:PSPA7_5298 hypothetical protein; Spore coat protein U 3937181..3937699 Rahnella sp. Y9602 10214663 YP_004214352.1 CDS Rahaq_3635 NC_015061.1 3937708 3938253 D PFAM: Spore coat protein U; KEGG: pwa:Pecwa_1448 spore coat U domain protein; Spore coat protein U 3937708..3938253 Rahnella sp. Y9602 10214664 YP_004214353.1 CDS Rahaq_3636 NC_015061.1 3938273 3939070 D KEGG: eca:ECA3075 fimbrial chaperone; fimbrial chaperone 3938273..3939070 Rahnella sp. Y9602 10214665 YP_004214354.1 CDS Rahaq_3637 NC_015061.1 3939089 3941536 D PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: pct:PC1_2819 fimbrial biogenesis outer membrane usher protein; fimbrial biogenesis outer membrane usher protein 3939089..3941536 Rahnella sp. Y9602 10214666 YP_004214355.1 CDS Rahaq_3638 NC_015061.1 3941533 3942501 D PFAM: Spore coat protein U; KEGG: pau:PA14_61550 hypothetical protein; Spore coat protein U 3941533..3942501 Rahnella sp. Y9602 10214667 YP_004214356.1 CDS Rahaq_3639 NC_015061.1 3942558 3943037 R PFAM: Cold-shock protein DNA-binding; KEGG: enc:ECL_03124 cold-shock DNA-binding domain protein; cold-shock protein complement(3942558..3943037) Rahnella sp. Y9602 10214668 YP_004214357.1 CDS Rahaq_3640 NC_015061.1 3943147 3943800 R PFAM: 2OG-Fe(II) oxygenase; KEGG: har:HEAR1490 oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions, repair of alkylated DNA; 2OG-Fe(II) oxygenase complement(3943147..3943800) Rahnella sp. Y9602 10214669 YP_004214358.1 CDS Rahaq_3641 NC_015061.1 3943938 3944756 D PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; KEGG: bid:Bind_3294 shikimate dehydrogenase substrate binding subunit; shikimate dehydrogenase 3943938..3944756 Rahnella sp. Y9602 10214670 YP_004214359.1 CDS Rahaq_3642 NC_015061.1 3944818 3946155 R TIGRFAM: glucarate dehydratase; KEGG: pct:PC1_3395 glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein; glucarate dehydratase complement(3944818..3946155) Rahnella sp. Y9602 10214671 YP_004214360.1 CDS Rahaq_3643 NC_015061.1 3946184 3947527 R KEGG: eca:ECA3576 glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein; glucarate dehydratase complement(3946184..3947527) Rahnella sp. Y9602 10214672 YP_004214361.1 CDS Rahaq_3644 NC_015061.1 3947524 3948897 R KEGG: pct:PC1_3397 D-galactonate transporter; TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; d-galactonate transporter complement(3947524..3948897) Rahnella sp. Y9602 10214673 YP_004214362.1 CDS Rahaq_3645 NC_015061.1 3949124 3950284 R PFAM: sugar diacid recognition domain protein; KEGG: pct:PC1_3095 carbohydrate diacid transcriptional activator CdaR; CdaR family transcriptional regulator complement(3949124..3950284) Rahnella sp. Y9602 10214674 YP_004214363.1 CDS Rahaq_3646 NC_015061.1 3950522 3951973 R SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: yen:YE0741 serine endoprotease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do complement(3950522..3951973) Rahnella sp. Y9602 10214675 YP_004214364.1 CDS Rahaq_3647 NC_015061.1 3952181 3953695 R SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; KEGG: spe:Spro_0788 deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; deoxyguanosinetriphosphate triphosphohydrolase complement(3952181..3953695) Rahnella sp. Y9602 10214676 YP_004214365.1 CDS Rahaq_3648 NC_015061.1 3953879 3954583 D TIGRFAM: MTA/SAH nucleosidase; KEGG: spe:Spro_0787 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; PFAM: purine or other phosphorylase family 1; MTA/SAH nucleosidase 3953879..3954583 Rahnella sp. Y9602 10214677 YP_004214366.1 CDS Rahaq_3649 NC_015061.1 3954583 3955389 D PFAM: periplasmic binding protein; KEGG: pay:PAU_00826 vitamin b12-binding protein precursor; periplasmic binding protein 3954583..3955389 Rahnella sp. Y9602 10214678 YP_004214367.1 CDS Rahaq_3650 NC_015061.1 3955721 3955966 D KEGG: ebi:EbC_08000 conserved uncharacterized protein; hypothetical protein 3955721..3955966 Rahnella sp. Y9602 10214679 YP_004214368.1 CDS Rahaq_3651 NC_015061.1 3956074 3956433 R KEGG: spe:Spro_0783 iron-sulfur cluster assembly accessory protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; iron-sulfur cluster assembly accessory protein complement(3956074..3956433) Rahnella sp. Y9602 10214680 YP_004214369.1 CDS Rahaq_3652 NC_015061.1 3956522 3957985 R PFAM: Cl- channel voltage-gated family protein; KEGG: spe:Spro_0782 chloride channel protein; Cl- channel voltage-gated family protein complement(3956522..3957985) Rahnella sp. Y9602 10214681 YP_004214370.1 CDS Rahaq_3653 NC_015061.1 3958172 3959452 D KEGG: yen:YE0734 glutamate-1-semialdehyde aminotransferase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; glutamate-1-semialdehyde-2,1-aminomutase 3958172..3959452 Rahnella sp. Y9602 10214682 YP_004214371.1 CDS Rahaq_3654 NC_015061.1 3959556 3961544 R PFAM: transport system permease protein; KEGG: spe:Spro_3976 iron-hydroxamate transporter permease subunit; transport system permease complement(3959556..3961544) Rahnella sp. Y9602 10214683 YP_004214372.1 CDS Rahaq_3655 NC_015061.1 3961541 3962443 R PFAM: periplasmic binding protein; KEGG: spe:Spro_3977 iron-hydroxamate transporter substrate-binding subunit; periplasmic binding protein complement(3961541..3962443) Rahnella sp. Y9602 10214684 YP_004214373.1 CDS Rahaq_3656 NC_015061.1 3962445 3963257 R KEGG: ypb:YPTS_0771 iron-hydroxamate transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(3962445..3963257) Rahnella sp. Y9602 10214685 YP_004214374.1 CDS Rahaq_3657 NC_015061.1 3963353 3965575 R KEGG: ecg:E2348C_0157 ferrichrome outer membrane transporter; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; TonB-dependent siderophore receptor complement(3963353..3965575) Rahnella sp. Y9602 10214686 YP_004214375.1 CDS Rahaq_3658 NC_015061.1 3965872 3968499 R TIGRFAM: penicillin-binding protein 1B; KEGG: spe:Spro_3981 penicillin-binding protein 1B; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein 1B complement(3965872..3968499) Rahnella sp. Y9602 10214687 YP_004214376.1 CDS Rahaq_3659 NC_015061.1 3968690 3971134 R TIGRFAM: ATP-dependent helicase HrpB; PFAM: Helicase ATP-dependent domain protein; helicase-associated domain protein; helicase domain protein; KEGG: spe:Spro_3982 ATP-dependent RNA helicase HrpB; SMART: DEAD-like helicase ; helicase domain protein; ATP-dependent helicase HrpB complement(3968690..3971134) Rahnella sp. Y9602 10214688 YP_004214377.1 CDS Rahaq_3660 NC_015061.1 3971231 3971773 D KEGG: spe:Spro_3983 2'-5' RNA ligase; TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; 2'-5' RNA ligase 3971231..3971773 Rahnella sp. Y9602 10214689 YP_004214378.1 CDS Rahaq_3661 NC_015061.1 3971822 3972556 D KEGG: plu:plu0877 sugar fermentation stimulation protein A; TIGRFAM: sugar fermentation stimulation protein; PFAM: sugar fermentation stimulation protein; sugar fermentation stimulation protein 3971822..3972556 Rahnella sp. Y9602 10214690 YP_004214379.1 CDS Rahaq_3662 NC_015061.1 3972787 3973242 D TIGRFAM: RNA polymerase-binding protein DksA; KEGG: kpu:KP1_0973 RNA polymerase-binding transcription factor; TraR/DksA family transcriptional regulator 3972787..3973242 Rahnella sp. Y9602 10214691 YP_004214380.1 CDS Rahaq_3663 NC_015061.1 3973305 3974180 D PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; KEGG: yen:YE0724 glutamyl-Q tRNA(Asp) synthetase; glutamyl/glutaminyl-tRNA synthetase 3973305..3974180 Rahnella sp. Y9602 10214692 YP_004214381.1 CDS Rahaq_3664 NC_015061.1 3974313 3976019 D KEGG: ypy:YPK_3470 poly(A) polymerase I; TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region; poly(A) polymerase 3974313..3976019 Rahnella sp. Y9602 10214693 YP_004214382.1 CDS Rahaq_3665 NC_015061.1 3976016 3976495 D TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; KEGG: ypb:YPTS_0762 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 3976016..3976495 Rahnella sp. Y9602 10214694 YP_004214383.1 CDS Rahaq_3666 NC_015061.1 3976501 3977886 R KEGG: spe:Spro_3989 sensor protein QseC; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase complement(3976501..3977886) Rahnella sp. Y9602 10214695 YP_004214384.1 CDS Rahaq_3667 NC_015061.1 3977883 3978569 R KEGG: spe:Spro_3990 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator complement(3977883..3978569) Rahnella sp. Y9602 10214696 YP_004214385.1 CDS Rahaq_3668 NC_015061.1 3978728 3979522 D TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; KEGG: ypi:YpsIP31758_3343 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 3978728..3979522 Rahnella sp. Y9602 10214697 YP_004214386.1 CDS Rahaq_3669 NC_015061.1 3979537 3980391 D KEGG: yen:YE0719 pantoate--beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; cytidyltransferase-related domain protein; PFAM: Pantoate-beta-alanine ligase; pantoate--beta-alanine ligase 3979537..3980391 Rahnella sp. Y9602 10214698 YP_004214387.1 CDS Rahaq_3670 NC_015061.1 3980500 3980880 D TIGRFAM: aspartate 1-decarboxylase; KEGG: pwa:Pecwa_1158 aspartate alpha-decarboxylase; PFAM: aspartate decarboxylase; aspartate 1-decarboxylase 3980500..3980880 Rahnella sp. Y9602 10214699 YP_004214388.1 CDS Rahaq_3671 NC_015061.1 3981024 3981794 R PFAM: ABC transporter; KEGG: spe:Spro_3995 ABC transporter; ABC transporter complement(3981024..3981794) Rahnella sp. Y9602 10214700 YP_004214389.1 CDS Rahaq_3672 NC_015061.1 3981794 3982717 R KEGG: spe:Spro_3996 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(3981794..3982717) Rahnella sp. Y9602 10214701 YP_004214390.1 CDS Rahaq_3673 NC_015061.1 3982853 3983509 D KEGG: cko:CKO_03241 carbonic anhydrase; PFAM: carbonic anhydrase; carbonate dehydratase 3982853..3983509 Rahnella sp. Y9602 10214702 YP_004214391.1 CDS Rahaq_3674 NC_015061.1 3984395 3984727 D KEGG: cdl:CDR20291_2141 hypothetical protein; hypothetical protein 3984395..3984727 Rahnella sp. Y9602 10214703 YP_004214392.1 CDS Rahaq_3675 NC_015061.1 3985113 3985604 R KEGG: pay:PAU_02414 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; type VI secretion system effector complement(3985113..3985604) Rahnella sp. Y9602 10214704 YP_004214393.1 CDS Rahaq_3676 NC_015061.1 3985606 3986106 R KEGG: pay:PAU_02413 hypothetical protein; hypothetical protein complement(3985606..3986106) Rahnella sp. Y9602 10214705 YP_004214394.1 CDS Rahaq_3677 NC_015061.1 3986103 3986462 R KEGG: plu:plu2153 hypothetical protein; hypothetical protein complement(3986103..3986462) Rahnella sp. Y9602 10214706 YP_004214395.1 CDS Rahaq_3678 NC_015061.1 3986880 3987416 R TIGRFAM: hypoxanthine phosphoribosyltransferase; KEGG: yen:YE0713 hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase complement(3986880..3987416) Rahnella sp. Y9602 10214707 YP_004214396.1 CDS Rahaq_3679 NC_015061.1 3987630 3988403 R KEGG: spe:Spro_3574 DNA-bindng transcriptional repressor SrlR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator complement(3987630..3988403) Rahnella sp. Y9602 10214708 YP_004214397.1 CDS Rahaq_3680 NC_015061.1 3988483 3988845 R PFAM: glucitol operon activator; KEGG: spe:Spro_3573 DNA-binding transcriptional activator GutM; glucitol operon activator complement(3988483..3988845) Rahnella sp. Y9602 10214709 YP_004214398.1 CDS Rahaq_3681 NC_015061.1 3988932 3989711 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eay:EAM_0524 sorbitol-6-phosphate dehydrogenase; short-chain dehydrogenase/reductase SDR complement(3988932..3989711) Rahnella sp. Y9602 10214710 YP_004214399.1 CDS Rahaq_3682 NC_015061.1 3989734 3990096 R PFAM: PTS system glucitol/sorbitol-specific IIA component; KEGG: spe:Spro_3571 PTS system glucitol/sorbitol-specific transporter subunit IIA; PTS system glucitol/sorbitol-specific transporter subunit IIA complement(3989734..3990096) Rahnella sp. Y9602 10214711 YP_004214400.1 CDS Rahaq_3683 NC_015061.1 3990106 3991095 R TIGRFAM: PTS system, glucitol/sorbitol-specific, IIBC subunit; KEGG: yen:YE1097 PTS system, glucitol/sorbitol-specific IIBC component; PFAM: Sorbitol phosphotransferase protein II domain-containing protein; PTS system glucitol/sorbitol-specific transporter subunit IIBC complement(3990106..3991095) Rahnella sp. Y9602 10214712 YP_004214401.1 CDS Rahaq_3684 NC_015061.1 3991143 3991691 R KEGG: yen:YE1098 PTS system, glucitol/sorbitol-specific IIC2 component; TIGRFAM: PTS system, glucitol/sorbitol-specific, IIC subunit; PFAM: PTS system protein II sorbitol-specific factor; PTS system glucitol/sorbitol-specific transporter subunit IIC complement(3991143..3991691) Rahnella sp. Y9602 10214713 YP_004214402.1 CDS Rahaq_3685 NC_015061.1 3991950 3993554 R KEGG: spe:Spro_3999 multicopper oxidase; manually curated; PFAM: multicopper oxidase type 3; multicopper oxidase type 2; multicopper oxidase type 3 complement(3991950..3993554) Rahnella sp. Y9602 10214714 YP_004214403.1 CDS Rahaq_3686 NC_015061.1 3993765 3994112 D KEGG: yen:YE0711 hypothetical protein; hypothetical protein 3993765..3994112 Rahnella sp. Y9602 10214715 YP_004214404.1 CDS Rahaq_3687 NC_015061.1 3994326 3995201 D KEGG: spe:Spro_4001 spermidine synthase; TIGRFAM: spermidine synthase; PFAM: Spermine synthase; spermidine synthase 3994326..3995201 Rahnella sp. Y9602 10214716 YP_004214405.1 CDS Rahaq_3688 NC_015061.1 3995230 3996024 D TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; KEGG: eca:ECA3334 S-adenosylmethionine decarboxylase; PFAM: S-adenosylmethionine decarboxylase related; S-adenosylmethionine decarboxylase 3995230..3996024 Rahnella sp. Y9602 10214717 YP_004214406.1 CDS Rahaq_3689 NC_015061.1 3996455 3997330 D KEGG: hha:Hhal_1884 hypothetical protein; hypothetical protein 3996455..3997330 Rahnella sp. Y9602 10214718 YP_004214407.1 CDS Rahaq_3690 NC_015061.1 3997434 3998324 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: yen:YE0707 hypothetical protein; hypothetical protein 3997434..3998324 Rahnella sp. Y9602 10214719 YP_004214408.1 CDS Rahaq_3691 NC_015061.1 3998314 3998679 R PFAM: Uncharacterised conserved protein UCP006287; KEGG: spe:Spro_4007 hypothetical protein; hypothetical protein complement(3998314..3998679) Rahnella sp. Y9602 10214720 YP_004214409.1 CDS Rahaq_3692 NC_015061.1 3998756 4001353 R KEGG: yen:YE0705 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; TIGRFAM: aconitate hydratase 2; PFAM: Aconitase B; aconitate hydratase domain-containing protein; aconitate hydratase 2 complement(3998756..4001353) Rahnella sp. Y9602 10214721 YP_004214410.1 CDS Rahaq_3693 NC_015061.1 4001975 4002490 D KEGG: ppp:PHYPADRAFT_92527 hypothetical protein; hypothetical protein 4001975..4002490 Rahnella sp. Y9602 10214722 YP_004214411.1 CDS Rahaq_3694 NC_015061.1 4002596 4003249 R PFAM: Fimbrial protein domain-containing protein; KEGG: esa:ESA_02541 hypothetical protein; fimbrial protein domain-containing protein complement(4002596..4003249) Rahnella sp. Y9602 10214723 YP_004214412.1 CDS Rahaq_3695 NC_015061.1 4003270 4003854 R PFAM: Fimbrial protein domain-containing protein; KEGG: kpu:KP1_0597 fimbrial protein; fimbrial protein domain-containing protein complement(4003270..4003854) Rahnella sp. Y9602 10214724 YP_004214413.1 CDS Rahaq_3696 NC_015061.1 4004117 4005205 R PFAM: extracellular solute-binding protein family 1; KEGG: ypy:YPK_2171 extracellular solute-binding protein; extracellular solute-binding protein complement(4004117..4005205) Rahnella sp. Y9602 10214725 YP_004214414.1 CDS Rahaq_3697 NC_015061.1 4005230 4006066 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yps:YPTB2014 ABC transporter permease subunit; binding-protein-dependent transport system inner membrane protein complement(4005230..4006066) Rahnella sp. Y9602 10214726 YP_004214415.1 CDS Rahaq_3698 NC_015061.1 4006063 4006926 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypb:YPTS_2073 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(4006063..4006926) Rahnella sp. Y9602 10214727 YP_004214416.1 CDS Rahaq_3699 NC_015061.1 4006913 4008004 R KEGG: ypb:YPTS_2074 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(4006913..4008004) Rahnella sp. Y9602 10214728 YP_004214417.1 CDS Rahaq_3700 NC_015061.1 4008233 4009063 D PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: ypb:YPTS_2075 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 4008233..4009063 Rahnella sp. Y9602 10214729 YP_004214418.1 CDS Rahaq_3701 NC_015061.1 4009086 4010198 D PFAM: ROK family protein; KEGG: ypb:YPTS_2076 ROK family protein; ROK family protein 4009086..4010198 Rahnella sp. Y9602 10214730 YP_004214419.1 CDS Rahaq_3703 NC_015061.1 4012877 4014301 R KEGG: spe:Spro_4009 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; dihydrolipoamide dehydrogenase complement(4012877..4014301) Rahnella sp. Y9602 10214732 YP_004214420.1 CDS Rahaq_3704 NC_015061.1 4014513 4016408 R KEGG: eca:ECA3788 dihydrolipoamide acetyltransferase; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase complement(4014513..4016408) Rahnella sp. Y9602 10214733 YP_004214421.1 CDS Rahaq_3705 NC_015061.1 4016422 4019085 R KEGG: spe:Spro_4011 pyruvate dehydrogenase subunit E1; TIGRFAM: 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; PFAM: Transketolase domain-containing protein; 2-oxo-acid dehydrogenase E1 complement(4016422..4019085) Rahnella sp. Y9602 10214734 YP_004214422.1 CDS Rahaq_3706 NC_015061.1 4019249 4020019 R KEGG: spe:Spro_4012 transcriptional regulator PdhR; PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(4019249..4020019) Rahnella sp. Y9602 10214735 YP_004214423.1 CDS Rahaq_3707 NC_015061.1 4020449 4021819 D PFAM: amino acid permease-associated region; KEGG: eta:ETA_08120 aromatic amino acid transporter; amino acid permease 4020449..4021819 Rahnella sp. Y9602 10214736 YP_004214424.1 CDS Rahaq_3708 NC_015061.1 4022036 4023478 D KEGG: spe:Spro_4014 sugar (glycoside-pentoside-hexuronide) transporter; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; sugar (Glycoside-Pentoside-Hexuronide) transporter 4022036..4023478 Rahnella sp. Y9602 10214737 YP_004214425.1 CDS Rahaq_3709 NC_015061.1 4023471 4024445 D KEGG: eca:ECA3793 putatuve glycosysl hydrolase; PFAM: glycoside hydrolase family 43; alpha-N-arabinofuranosidase 4023471..4024445 Rahnella sp. Y9602 10214738 YP_004214426.1 CDS Rahaq_3710 NC_015061.1 4024517 4025371 R KEGG: spe:Spro_0780 regulatory protein AmpE; signaling modulator of AmpD, AmpE complement(4024517..4025371) Rahnella sp. Y9602 10214739 YP_004214427.1 CDS Rahaq_3711 NC_015061.1 4025431 4026003 R KEGG: esa:ESA_03229 N-acetyl-anhydromuranmyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD complement(4025431..4026003) Rahnella sp. Y9602 10214740 YP_004214428.1 CDS Rahaq_3712 NC_015061.1 4026098 4026991 D TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: spe:Spro_0779 quinolinate phosphoribosyltransferase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 4026098..4026991 Rahnella sp. Y9602 10214741 YP_004214429.1 CDS Rahaq_3713 NC_015061.1 4027283 4027729 D KEGG: spe:Spro_0778 major pilin subunit; major pilin subunit 4027283..4027729 Rahnella sp. Y9602 10214742 YP_004214430.1 CDS Rahaq_3714 NC_015061.1 4027729 4029225 D PFAM: type II secretion system protein E; KEGG: spe:Spro_0777 hypothetical protein; type II secretion system protein E 4027729..4029225 Rahnella sp. Y9602 10214743 YP_004214431.1 CDS Rahaq_3715 NC_015061.1 4029222 4030442 D PFAM: Type II secretion system F domain; KEGG: spe:Spro_0776 type IV pilin biogenesis protein; type II secretion system F domain-containing protein 4029222..4030442 Rahnella sp. Y9602 10214744 YP_004214432.1 CDS Rahaq_3716 NC_015061.1 4030496 4031539 R KEGG: yen:YE0686 guanosine 5'-monophosphate oxidoreductase; TIGRFAM: guanosine monophosphate reductase; PFAM: IMP dehydrogenase/GMP reductase; guanosine monophosphate reductase complement(4030496..4031539) Rahnella sp. Y9602 10214745 YP_004214433.1 CDS Rahaq_3717 NC_015061.1 4031782 4032378 D TIGRFAM: dephospho-CoA kinase; KEGG: spe:Spro_0774 dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase 4031782..4032378 Rahnella sp. Y9602 10214746 YP_004214434.1 CDS Rahaq_3718 NC_015061.1 4032404 4033156 D PFAM: protein of unknown function DUF1342; KEGG: spe:Spro_0773 hypothetical protein; hypothetical protein 4032404..4033156 Rahnella sp. Y9602 10214747 YP_004214435.1 CDS Rahaq_3719 NC_015061.1 4033166 4033363 D PFAM: protein of unknown function DUF329; KEGG: yen:YE0683 zinc-binding protein; hypothetical protein 4033166..4033363 Rahnella sp. Y9602 10214748 YP_004214436.1 CDS Rahaq_3720 NC_015061.1 4033481 4034803 D PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein; transposase IS4 family protein 4033481..4034803 Rahnella sp. Y9602 10214749 YP_004214437.1 CDS Rahaq_3721 NC_015061.1 4034857 4035258 R KEGG: spe:Spro_0771 nucleoside triphosphate pyrophosphohydrolase; TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; mutator MutT protein complement(4034857..4035258) Rahnella sp. Y9602 10214750 YP_004214438.1 CDS Rahaq_3722 NC_015061.1 4035373 4038090 R KEGG: ypb:YPTS_0724 preprotein translocase subunit SecA; TIGRFAM: preprotein translocase SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; SEC-C motif domain protein; preprotein translocase subunit SecA complement(4035373..4038090) Rahnella sp. Y9602 10214751 YP_004214439.1 CDS Rahaq_3723 NC_015061.1 4038171 4038698 R PFAM: secretion monitor family proten; KEGG: yen:YE0680 SecA regulator SecM; secretion monitor family proten complement(4038171..4038698) Rahnella sp. Y9602 10214752 YP_004214440.1 CDS Rahaq_3724 NC_015061.1 4038725 4039249 D PFAM: protein of unknown function DUF721; KEGG: spe:Spro_0768 hypothetical protein; hypothetical protein 4038725..4039249 Rahnella sp. Y9602 10214753 YP_004214441.1 CDS Rahaq_3725 NC_015061.1 4039265 4040209 R KEGG: efe:EFER_0118 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; UDP-3-0-acyl N-acetylglucosamine deacetylase complement(4039265..4040209) Rahnella sp. Y9602 10214754 YP_004214442.1 CDS Rahaq_3726 NC_015061.1 4040282 4041436 R KEGG: pam:PANA_0724 FtsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain; cell division protein FtsZ complement(4040282..4041436) Rahnella sp. Y9602 10214755 YP_004214443.1 CDS Rahaq_3727 NC_015061.1 4041508 4042764 R KEGG: spe:Spro_0765 cell division protein FtsA; TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; cell division protein FtsA complement(4041508..4042764) Rahnella sp. Y9602 10214756 YP_004214444.1 CDS Rahaq_3728 NC_015061.1 4042761 4043597 R PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: spe:Spro_0764 cell division protein FtsQ; cell division protein FtsQ complement(4042761..4043597) Rahnella sp. Y9602 10214757 YP_004214445.1 CDS Rahaq_3729 NC_015061.1 4043599 4044519 R TIGRFAM: D-alanine/D-alanine ligase; KEGG: spe:Spro_0763 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; D-alanine--D-alanine ligase complement(4043599..4044519) Rahnella sp. Y9602 10214758 YP_004214446.1 CDS Rahaq_3730 NC_015061.1 4044512 4045999 R KEGG: spe:Spro_0762 UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; UDP-N-acetylmuramate--L-alanine ligase complement(4044512..4045999) Rahnella sp. Y9602 10214759 YP_004214447.1 CDS Rahaq_3731 NC_015061.1 4046066 4047133 R KEGG: eca:ECA3815 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain; UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-UDP N- acetylglucosamine transferase complement(4046066..4047133) Rahnella sp. Y9602 10214760 YP_004214448.1 CDS Rahaq_3732 NC_015061.1 4047130 4048332 R KEGG: yen:YE0671 cell division protein FtsW; TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; cell division protein FtsW complement(4047130..4048332) Rahnella sp. Y9602 10214761 YP_004214449.1 CDS Rahaq_3733 NC_015061.1 4048332 4049648 R KEGG: spe:Spro_0759 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramoylalanine--D-glutamate ligase complement(4048332..4049648) Rahnella sp. Y9602 10214762 YP_004214450.1 CDS Rahaq_3734 NC_015061.1 4049651 4050733 R KEGG: spe:Spro_0758 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(4049651..4050733) Rahnella sp. Y9602 10214763 YP_004214451.1 CDS Rahaq_3735 NC_015061.1 4050727 4052088 R KEGG: spe:Spro_0757 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase complement(4050727..4052088) Rahnella sp. Y9602 10214764 YP_004214452.1 CDS Rahaq_3736 NC_015061.1 4052085 4053572 R KEGG: pct:PC1_3597 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramyl tripeptide synthetase complement(4052085..4053572) Rahnella sp. Y9602 10214765 YP_004214453.1 CDS Rahaq_3737 NC_015061.1 4053559 4055322 R KEGG: spe:Spro_0755 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; peptidoglycan glycosyltransferase complement(4053559..4055322) Rahnella sp. Y9602 10214766 YP_004214454.1 CDS Rahaq_3738 NC_015061.1 4055350 4055670 R KEGG: pam:PANA_0712 FtsL; TIGRFAM: cell division protein FtsL; PFAM: cell division protein FtsL; cell division protein FtsL complement(4055350..4055670) Rahnella sp. Y9602 10214767 YP_004214455.1 CDS Rahaq_3739 NC_015061.1 4055667 4056608 R KEGG: yen:YE0664 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; S-adenosyl-methyltransferase MraW complement(4055667..4056608) Rahnella sp. Y9602 10214768 YP_004214456.1 CDS Rahaq_3740 NC_015061.1 4056611 4057069 R KEGG: spe:Spro_0752 cell division protein MraZ; TIGRFAM: MraZ protein; PFAM: MraZ domain; MraZ protein complement(4056611..4057069) Rahnella sp. Y9602 10214769 YP_004214457.1 CDS Rahaq_3741 NC_015061.1 4057778 4058782 R TIGRFAM: D-fructose-responsive transcription factor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE0661 DNA-binding transcriptional regulator FruR; SMART: regulatory protein LacI; LacI family transcriptional regulator complement(4057778..4058782) Rahnella sp. Y9602 10214770 YP_004214458.1 CDS Rahaq_3742 NC_015061.1 4058949 4059440 R TIGRFAM: acetolactate synthase, small subunit; KEGG: spe:Spro_0749 acetolactate synthase 3 regulatory subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein; acetolactate synthase small subunit complement(4058949..4059440) Rahnella sp. Y9602 10214771 YP_004214459.1 CDS Rahaq_3743 NC_015061.1 4059443 4061161 R KEGG: spe:Spro_0748 acetolactate synthase 3 catalytic subunit; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; acetolactate synthase large subunit complement(4059443..4061161) Rahnella sp. Y9602 10214772 YP_004214460.1 CDS Rahaq_3744 NC_015061.1 4061589 4063385 R PFAM: AMP-dependent synthetase and ligase; KEGG: etr:ETAE_0624 AMP-binding enzyme-family protein; AMP-dependent synthetase/ligase complement(4061589..4063385) Rahnella sp. Y9602 10214773 YP_004214461.1 CDS Rahaq_3745 NC_015061.1 4063675 4064622 R PFAM: regulatory protein LysR; KEGG: hde:HDEF_1793 leucine transcriptional activator; LysR family transcriptional regulator complement(4063675..4064622) Rahnella sp. Y9602 10214774 YP_004214462.1 CDS Rahaq_3746 NC_015061.1 4065361 4066950 D KEGG: spe:Spro_0745 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein; 2-isopropylmalate synthase 4065361..4066950 Rahnella sp. Y9602 10214775 YP_004214463.1 CDS Rahaq_3747 NC_015061.1 4066953 4068044 D TIGRFAM: 3-isopropylmalate dehydrogenase; KEGG: ypy:YPK_3536 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 4066953..4068044 Rahnella sp. Y9602 10214776 YP_004214464.1 CDS Rahaq_3748 NC_015061.1 4068046 4069446 D KEGG: pct:PC1_3609 isopropylmalate isomerase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain-containing protein; 3-isopropylmalate dehydratase large subunit 4068046..4069446 Rahnella sp. Y9602 10214777 YP_004214465.1 CDS Rahaq_3749 NC_015061.1 4069457 4070059 D KEGG: spe:Spro_0742 isopropylmalate isomerase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain-containing protein; 3-isopropylmalate dehydratase small subunit 4069457..4070059 Rahnella sp. Y9602 10214778 YP_004214466.1 CDS Rahaq_3750 NC_015061.1 4070343 4071035 R KEGG: dmo:Dmoj_GI20120 GI20120 gene product from transcript GI20120-RA; hypothetical protein complement(4070343..4071035) Rahnella sp. Y9602 10214779 YP_004214467.1 CDS Rahaq_3751 NC_015061.1 4071263 4072426 R PFAM: major facilitator superfamily MFS_1; KEGG: ebi:EbC_07030 sugar efflux transporter; major facilitator superfamily protein complement(4071263..4072426) Rahnella sp. Y9602 10214780 YP_004214468.1 CDS Rahaq_3752 NC_015061.1 4072587 4072772 R KEGG: spe:Spro_0739 hypothetical protein; hypothetical protein complement(4072587..4072772) Rahnella sp. Y9602 10214781 YP_004214469.1 CDS Rahaq_3753 NC_015061.1 4072875 4074536 D PFAM: extracellular solute-binding protein family 5; KEGG: spe:Spro_0738 transcriptional regulator SgrR; family 5 extracellular solute-binding protein 4072875..4074536 Rahnella sp. Y9602 10214782 YP_004214470.1 CDS Rahaq_3754 NC_015061.1 4074750 4075733 D KEGG: pam:PANA_0694 TbpA; TIGRFAM: thiamine ABC transporter periplasmic binding protein; ABC transporter periplasmic binding protein, thiB subfamily; PFAM: extracellular solute-binding protein family 1; thiamine ABC transporter periplasmic binding protein 4074750..4075733 Rahnella sp. Y9602 10214783 YP_004214471.1 CDS Rahaq_3755 NC_015061.1 4075709 4077319 D KEGG: spe:Spro_0736 thiamine transporter membrane protein; TIGRFAM: thiamine ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; thiamine ABC transporter inner membrane subunit 4075709..4077319 Rahnella sp. Y9602 10214784 YP_004214472.1 CDS Rahaq_3756 NC_015061.1 4077303 4078013 D TIGRFAM: ABC transporter ATPase; PFAM: ABC transporter related; KEGG: yen:YE0640 thiamine transporter ATP-binding subunit; SMART: AAA ATPase; ABC transporter ATPase 4077303..4078013 Rahnella sp. Y9602 10214785 YP_004214473.1 CDS Rahaq_3757 NC_015061.1 4078003 4078770 R PFAM: SNARE associated Golgi protein; KEGG: yen:YE0639 DedA family membrane protein; hypothetical protein complement(4078003..4078770) Rahnella sp. Y9602 10214786 YP_004214474.1 CDS Rahaq_3758 NC_015061.1 4079072 4081414 D KEGG: yen:YE0637 DNA polymerase II; PFAM: DNA polymerase B region; DNA polymerase B exonuclease; SMART: DNA-directed DNA polymerase B; DNA polymerase B region 4079072..4081414 Rahnella sp. Y9602 10214787 YP_004214475.1 CDS Rahaq_3759 NC_015061.1 4081626 4084523 D KEGG: yen:YE0636 ATP-dependent helicase HepA; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; SNF2-related protein 4081626..4084523 Rahnella sp. Y9602 10214788 YP_004214476.1 CDS Rahaq_3760 NC_015061.1 4084572 4085291 D PFAM: pseudouridine synthase; KEGG: pct:PC1_3630 pseudouridine synthase; pseudouridine synthase 4084572..4085291 Rahnella sp. Y9602 10214789 YP_004214477.1 CDS Rahaq_3761 NC_015061.1 4085498 4089274 D TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; KEGG: ebi:EbC_39640 IgA1 protease precursor; PFAM: peptidase S6 IgA endopeptidase; Autotransporter beta- domain protein; outer membrane autotransporter barrel domain-containing protein 4085498..4089274 Rahnella sp. Y9602 10214790 YP_004214478.1 CDS Rahaq_3762 NC_015061.1 4089343 4090164 R KEGG: eta:ETA_07280 Dna-J like membrane chaperone protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; molecular chaperone DnaJ complement(4089343..4090164) Rahnella sp. Y9602 10214791 YP_004214479.1 CDS Rahaq_3763 NC_015061.1 4090346 4092721 D KEGG: yen:YE0633 organic solvent tolerance protein; manually curated; PFAM: Organic solvent tolerance protein; OstA family protein; organic solvent tolerance protein 4090346..4092721 Rahnella sp. Y9602 10214792 YP_004214480.1 CDS Rahaq_3764 NC_015061.1 4092808 4094103 D PFAM: SurA domain; PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: spe:Spro_0726 peptidyl-prolyl cis-trans isomerase SurA; SurA domain-containing protein 4092808..4094103 Rahnella sp. Y9602 10214793 YP_004214481.1 CDS Rahaq_3765 NC_015061.1 4094093 4095100 D TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: ypb:YPTS_0657 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 4094093..4095100 Rahnella sp. Y9602 10214794 YP_004214482.1 CDS Rahaq_3766 NC_015061.1 4095106 4095933 D TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: spe:Spro_0724 dimethyladenosine transferase; SMART: Ribosomal RNA adenine methylase transferase-like; dimethyladenosine transferase 4095106..4095933 Rahnella sp. Y9602 10214795 YP_004214483.1 CDS Rahaq_3767 NC_015061.1 4095938 4096315 D PFAM: ApaG domain protein; KEGG: spe:Spro_0723 ApaG protein; ApaG protein 4095938..4096315 Rahnella sp. Y9602 10214796 YP_004214484.1 CDS Rahaq_3768 NC_015061.1 4096321 4097175 D KEGG: yen:YE0628 diadenosine tetraphosphatase; TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical); PFAM: metallophosphoesterase; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 4096321..4097175 Rahnella sp. Y9602 10214797 YP_004214485.1 CDS Rahaq_3769 NC_015061.1 4097413 4097898 R KEGG: ddc:Dd586_3577 dihydrofolate reductase; PFAM: dihydrofolate reductase region; Dihydrofolate reductase complement(4097413..4097898) Rahnella sp. Y9602 10214798 YP_004214486.1 CDS Rahaq_3770 NC_015061.1 4098168 4098632 R KEGG: ypb:YPTS_0651 hypothetical protein; hypothetical protein complement(4098168..4098632) Rahnella sp. Y9602 10214799 YP_004214487.1 CDS Rahaq_3771 NC_015061.1 4098629 4099438 R PFAM: protein of unknown function DUF1212; KEGG: ypb:YPTS_0650 hypothetical protein; hypothetical protein complement(4098629..4099438) Rahnella sp. Y9602 10214800 YP_004214488.1 CDS Rahaq_3772 NC_015061.1 4099544 4100158 D PFAM: lysine exporter protein (LYSE/YGGA); KEGG: spe:Spro_0717 lysine exporter protein LysE/YggA; lysine exporter protein LysE/YggA 4099544..4100158 Rahnella sp. Y9602 10214801 YP_004214489.1 CDS Rahaq_3773 NC_015061.1 4100214 4102067 R KEGG: spe:Spro_0716 glutathione-regulated potassium-efflux system protein KefC; TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; potassium efflux system protein complement(4100214..4102067) Rahnella sp. Y9602 10214802 YP_004214490.1 CDS Rahaq_3774 NC_015061.1 4102060 4102614 R PFAM: NAD(P)H dehydrogenase (quinone); KEGG: spe:Spro_0715 glutathione-regulated potassium-efflux system ancillary protein KefF; NAD(P)H dehydrogenase (quinone) complement(4102060..4102614) Rahnella sp. Y9602 10214803 YP_004214491.1 CDS Rahaq_3775 NC_015061.1 4102733 4105324 R KEGG: she:Shewmr4_2805 glycosyl hydrolase family chitinase; PFAM: glycoside hydrolase family 18; Chitinase A domain protein; PKD domain containing protein; Carbohydrate-binding family V/XII; SMART: chitinase II; PKD domain containing protein; Carbohydrate-binding family V/XII; glycoside hydrolase complement(4102733..4105324) Rahnella sp. Y9602 10214804 YP_004214492.1 CDS Rahaq_3776 NC_015061.1 4105660 4108884 R KEGG: yen:YE0622 carbamoyl phosphate synthase large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; carbamoyl-phosphate synthase large subunit complement(4105660..4108884) Rahnella sp. Y9602 10214805 YP_004214493.1 CDS Rahaq_3777 NC_015061.1 4108901 4110052 R KEGG: spe:Spro_0713 carbamoyl phosphate synthase small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; carbamoyl-phosphate synthase small subunit complement(4108901..4110052) Rahnella sp. Y9602 10214806 YP_004214494.1 CDS Rahaq_3778 NC_015061.1 4110530 4111351 R TIGRFAM: dihydrodipicolinate reductase; KEGG: pct:PC1_3649 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase complement(4110530..4111351) Rahnella sp. Y9602 10214807 YP_004214495.1 CDS Rahaq_3779 NC_015061.1 4112041 4113186 D KEGG: ebi:EbC_38880 outer membrane protein; outer membrane protein 4112041..4113186 Rahnella sp. Y9602 10214808 YP_004214496.1 CDS Rahaq_3780 NC_015061.1 4113347 4114222 D PFAM: SMP-30/gluconolaconase/LRE-like region-containing protein; KEGG: ctu:Ctu_06610 hypothetical protein; SMP-30/gluconolaconase/LRE-like region-containing protein 4113347..4114222 Rahnella sp. Y9602 10214809 YP_004214497.1 CDS Rahaq_3781 NC_015061.1 4114289 4115242 R TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: spe:Spro_0701 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PFAM: LytB protein; hydroxymethylbutenyl pyrophosphate reductase complement(4114289..4115242) Rahnella sp. Y9602 10214810 YP_004214498.1 CDS Rahaq_3782 NC_015061.1 4115223 4115693 R KEGG: spe:Spro_0700 peptidylprolyl isomerase FKBP-type; PFAM: peptidylprolyl isomerase FKBP-type; Peptidylprolyl isomerase complement(4115223..4115693) Rahnella sp. Y9602 10214811 YP_004214499.1 CDS Rahaq_3783 NC_015061.1 4115699 4116205 R TIGRFAM: lipoprotein signal peptidase; KEGG: spe:Spro_0699 lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; lipoprotein signal peptidase complement(4115699..4116205) Rahnella sp. Y9602 10214812 YP_004214500.1 CDS Rahaq_3784 NC_015061.1 4116205 4119021 R KEGG: ypb:YPTS_0641 isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase complement(4116205..4119021) Rahnella sp. Y9602 10214813 YP_004214501.1 CDS Rahaq_3785 NC_015061.1 4119083 4120021 R TIGRFAM: riboflavin biosynthesis protein RibF; KEGG: spe:Spro_0697 bifunctional riboflavin kinase/FMN adenylyltransferase; PFAM: FAD synthetase; Riboflavin kinase; riboflavin biosynthesis protein RibF complement(4119083..4120021) Rahnella sp. Y9602 10214814 YP_004214502.1 CDS Rahaq_3786 NC_015061.1 4120461 4120724 D KEGG: ypb:YPTS_0639 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20; 30S ribosomal protein S20 4120461..4120724 Rahnella sp. Y9602 10214815 YP_004214503.1 CDS Rahaq_3787 NC_015061.1 4120807 4121694 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: spe:Spro_0695 transcriptional activator NhaR; LysR family transcriptional regulator complement(4120807..4121694) Rahnella sp. Y9602 10214816 YP_004214504.1 CDS Rahaq_3788 NC_015061.1 4121734 4122909 R KEGG: yen:YE0611 pH-dependent sodium/proton antiporter; TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA; Na+/H+ antiporter NhaA complement(4121734..4122909) Rahnella sp. Y9602 10214817 YP_004214505.1 CDS Rahaq_3789 NC_015061.1 4123139 4124272 R TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; DnaJ central domain protein; heat shock protein DnaJ domain protein; KEGG: kva:Kvar_4379 chaperone protein DnaJ; SMART: heat shock protein DnaJ domain protein; molecular chaperone DnaJ complement(4123139..4124272) Rahnella sp. Y9602 10214818 YP_004214506.1 CDS Rahaq_3790 NC_015061.1 4124372 4126273 R TIGRFAM: chaperone protein DnaK; KEGG: ypi:YpsIP31758_3466 molecular chaperone DnaK; PFAM: Heat shock protein 70; molecular chaperone DnaK complement(4124372..4126273) Rahnella sp. Y9602 10214819 YP_004214507.1 CDS Rahaq_3791 NC_015061.1 4126593 4127192 D PFAM: GPR1/FUN34/yaaH family protein; KEGG: dda:Dd703_0580 hypothetical protein; GPR1/FUN34/yaaH family protein 4126593..4127192 Rahnella sp. Y9602 10214820 YP_004214508.1 CDS Rahaq_3792 NC_015061.1 4127254 4128576 R PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_0690 major facilitator transporter; major facilitator superfamily protein complement(4127254..4128576) Rahnella sp. Y9602 10214821 YP_004214509.1 CDS Rahaq_3793 NC_015061.1 4128719 4129306 R KEGG: esa:ESA_03329 molybdenum cofactor biosynthesis protein MogA; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; molybdenum cofactor synthesis domain-containing protein complement(4128719..4129306) Rahnella sp. Y9602 10214822 YP_004214510.1 CDS Rahaq_3794 NC_015061.1 4129433 4130386 R KEGG: yen:YE0604 transaldolase B; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase complement(4129433..4130386) Rahnella sp. Y9602 10214823 YP_004214511.1 CDS Rahaq_3795 NC_015061.1 4130662 4132089 D KEGG: spe:Spro_0687 amino acid carrier protein; TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; amino acid carrier protein 4130662..4132089 Rahnella sp. Y9602 10214824 YP_004214512.1 CDS Rahaq_3796 NC_015061.1 4132201 4132974 D PFAM: protein of unknown function DUF328; KEGG: spe:Spro_0686 hypothetical protein; hypothetical protein 4132201..4132974 Rahnella sp. Y9602 10214825 YP_004214513.1 CDS Rahaq_3797 NC_015061.1 4133042 4134331 R TIGRFAM: threonine synthase; KEGG: ypb:YPTS_0628 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein subunit beta; threonine synthase complement(4133042..4134331) Rahnella sp. Y9602 10214826 YP_004214514.1 CDS Rahaq_3798 NC_015061.1 4134356 4135285 R KEGG: spe:Spro_0684 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein; homoserine kinase complement(4134356..4135285) Rahnella sp. Y9602 10214827 YP_004214515.1 CDS Rahaq_3799 NC_015061.1 4135287 4137746 R KEGG: spe:Spro_0683 bifunctional aspartokinase I/homoserine dehydrogenase I; TIGRFAM: aspartate kinase; PFAM: homoserine dehydrogenase; aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding; aspartate kinase complement(4135287..4137746) Rahnella sp. Y9602 10214828 YP_004214516.1 CDS Rahaq_3800 NC_015061.1 4138121 4138807 R KEGG: spe:Spro_0682 RNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA methyltransferase, TrmH family, group 1 complement(4138121..4138807) Rahnella sp. Y9602 10214829 YP_004214517.1 CDS Rahaq_3801 NC_015061.1 4139474 4140190 D KEGG: spe:Spro_0681 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator 4139474..4140190 Rahnella sp. Y9602 10214830 YP_004214518.1 CDS Rahaq_3802 NC_015061.1 4140282 4140764 R PFAM: CreA family protein; KEGG: spe:Spro_0680 hypothetical protein; CreA family protein complement(4140282..4140764) Rahnella sp. Y9602 10214831 YP_004214519.1 CDS Rahaq_3803 NC_015061.1 4140973 4141836 D KEGG: spe:Spro_0679 AraC family transcriptional regulator; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 4140973..4141836 Rahnella sp. Y9602 10214832 YP_004214520.1 CDS Rahaq_3804 NC_015061.1 4141849 4142496 R PFAM: Phosphoglycerate mutase; KEGG: spe:Spro_0678 phosphoglycerate mutase; phosphoglycerate mutase complement(4141849..4142496) Rahnella sp. Y9602 10214833 YP_004214521.1 CDS Rahaq_3805 NC_015061.1 4142548 4143081 D PFAM: protein of unknown function DUF84; KEGG: pwa:Pecwa_3869 NTPase; hypothetical protein 4142548..4143081 Rahnella sp. Y9602 10214834 YP_004214522.1 CDS Rahaq_3806 NC_015061.1 4143105 4143440 R KEGG: spe:Spro_0676 Trp operon repressor; TIGRFAM: trp operon repressor; PFAM: Trp repressor; Trp operon repressor complement(4143105..4143440) Rahnella sp. Y9602 10214835 YP_004214523.1 CDS Rahaq_3807 NC_015061.1 4143497 4145425 R PFAM: lytic transglycosylase catalytic; KEGG: spe:Spro_0675 lytic murein transglycosylase; lytic transglycosylase complement(4143497..4145425) Rahnella sp. Y9602 10214836 YP_004214524.1 CDS Rahaq_3808 NC_015061.1 4146014 4148752 D KEGG: ypb:YPTS_0616 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; P-type HAD superfamily ATPase 4146014..4148752 Rahnella sp. Y9602 10214837 YP_004214525.1 CDS Rahaq_3809 NC_015061.1 4149076 4149756 D KEGG: spe:Spro_3050 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; LuxR family transcriptional regulator 4149076..4149756 Rahnella sp. Y9602 10214838 YP_004214526.1 CDS Rahaq_3810 NC_015061.1 4149867 4151627 D KEGG: ebi:EbC_06190 ATP-binding component of a transport system; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 4149867..4151627 Rahnella sp. Y9602 10214839 YP_004214527.1 CDS Rahaq_3811 NC_015061.1 4151692 4152600 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA3903 LysR family transcriptional activator; LysR family transcriptional regulator complement(4151692..4152600) Rahnella sp. Y9602 10214840 YP_004214528.1 CDS Rahaq_3812 NC_015061.1 4152701 4153702 D KEGG: spe:Spro_0669 zinc-binding alcohol dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; zinc-binding alcohol dehydrogenase family protein 4152701..4153702 Rahnella sp. Y9602 10214841 YP_004214529.1 CDS Rahaq_3813 NC_015061.1 4153772 4154629 R KEGG: cko:CKO_03255 hypothetical protein; hypothetical protein complement(4153772..4154629) Rahnella sp. Y9602 10214842 YP_004214530.1 CDS Rahaq_3814 NC_015061.1 4154647 4156185 R KEGG: spq:SPAB_00196 hypothetical protein; hypothetical protein complement(4154647..4156185) Rahnella sp. Y9602 10214843 YP_004214531.1 CDS Rahaq_3815 NC_015061.1 4156532 4157791 R TIGRFAM: nicotinamide-nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: helix-turn-helix domain protein; KEGG: ypi:YpsIP31758_3491 nicotinamide-nucleotide adenylyltransferase; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator complement(4156532..4157791) Rahnella sp. Y9602 10214844 YP_004214532.1 CDS Rahaq_3816 NC_015061.1 4157864 4159246 R KEGG: eta:ETA_06730 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: AAA ATPase; DNA repair protein RadA complement(4157864..4159246) Rahnella sp. Y9602 10214845 YP_004214533.1 CDS Rahaq_3817 NC_015061.1 4159267 4160232 R TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: spe:Spro_0666 phosphoserine phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoserine phosphatase SerB complement(4159267..4160232) Rahnella sp. Y9602 10214846 YP_004214534.1 CDS Rahaq_3818 NC_015061.1 4160467 4161255 D PFAM: Virulence factor, haemolysin regulator; KEGG: yps:YPTB0585 hypothetical protein; Virulence factor, hemolysin regulator 4160467..4161255 Rahnella sp. Y9602 10214847 YP_004214535.1 CDS Rahaq_3819 NC_015061.1 4161257 4162603 R PFAM: HipA domain protein; KEGG: spe:Spro_0664 hypothetical protein; HipA domain-containing protein complement(4161257..4162603) Rahnella sp. Y9602 10214848 YP_004214536.1 CDS Rahaq_3820 NC_015061.1 4162777 4163496 R KEGG: ctu:Ctu_05990 purine nucleoside phosphorylase DeoD-type; TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; purine nucleoside phosphorylase complement(4162777..4163496) Rahnella sp. Y9602 10214849 YP_004214537.1 CDS Rahaq_3821 NC_015061.1 4163580 4164803 R TIGRFAM: phosphopentomutase; KEGG: ctu:Ctu_05980 phosphopentomutase; PFAM: metalloenzyme domain protein; phosphopentomutase complement(4163580..4164803) Rahnella sp. Y9602 10214850 YP_004214538.1 CDS Rahaq_3822 NC_015061.1 4164892 4166220 R TIGRFAM: thymidine phosphorylase; pyrimidine-nucleoside phosphorylase; KEGG: spe:Spro_0661 thymidine phosphorylase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; Pyrimidine nucleoside phosphorylase domain; thymidine phosphorylase complement(4164892..4166220) Rahnella sp. Y9602 10214851 YP_004214539.1 CDS Rahaq_3823 NC_015061.1 4166311 4167090 R TIGRFAM: deoxyribose-phosphate aldolase; KEGG: spe:Spro_0660 deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; deoxyribose-phosphate aldolase complement(4166311..4167090) Rahnella sp. Y9602 10214852 YP_004214540.1 CDS Rahaq_3824 NC_015061.1 4167146 4167613 D KEGG: ptm:GSPATT00019616001 hypothetical protein; hypothetical protein 4167146..4167613 Rahnella sp. Y9602 10214853 YP_004214541.1 CDS Rahaq_3825 NC_015061.1 4167639 4168424 R PFAM: TatD-related deoxyribonuclease; KEGG: spe:Spro_0657 TatD-related deoxyribonuclease; TatD-related deoxyribonuclease complement(4167639..4168424) Rahnella sp. Y9602 10214854 YP_004214542.1 CDS Rahaq_3826 NC_015061.1 4168421 4169671 R PFAM: Patatin; KEGG: yen:YE0567 hypothetical protein; patatin complement(4168421..4169671) Rahnella sp. Y9602 10214855 YP_004214543.1 CDS Rahaq_3827 NC_015061.1 4169867 4170028 R PFAM: protein of unknown function DUF1328; KEGG: ypb:YPTS_0599 hypothetical protein; hypothetical protein complement(4169867..4170028) Rahnella sp. Y9602 10214856 YP_004214544.1 CDS Rahaq_3828 NC_015061.1 4170348 4170941 R KEGG: spe:Spro_0653 periplasmic protein; PFAM: transport-associated; SMART: Transport-associated and nodulation region; transport-associated protein complement(4170348..4170941) Rahnella sp. Y9602 10214857 YP_004214545.1 CDS Rahaq_3829 NC_015061.1 4171365 4173920 R PFAM: Carbohydrate-binding family V/XII; PKD domain containing protein; KEGG: cro:ROD_44811 polysaccharide degrading enzyme; SMART: Carbohydrate-binding family V/XII; PKD domain containing protein; lysozyme complement(4171365..4173920) Rahnella sp. Y9602 10214858 YP_004214546.1 CDS Rahaq_3830 NC_015061.1 4174333 4175922 R KEGG: spe:Spro_0652 peptide chain release factor 3; TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; peptide chain release factor 3 complement(4174333..4175922) Rahnella sp. Y9602 10214859 YP_004214547.1 CDS Rahaq_3831 NC_015061.1 4176087 4177346 R KEGG: sbn:Sbal195_3381 HipA domain-containing protein; TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; HipA N-terminal domain-containing protein complement(4176087..4177346) Rahnella sp. Y9602 10214860 YP_004214548.1 CDS Rahaq_3832 NC_015061.1 4177349 4177672 R KEGG: sbn:Sbal195_3478 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(4177349..4177672) Rahnella sp. Y9602 10214861 YP_004214549.1 CDS Rahaq_3833 NC_015061.1 4177904 4178347 R TIGRFAM: ribosomal-protein-alanine acetyltransferase; KEGG: yen:YE0563 ribosomal-protein-alanine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; ribosomal-protein-alanine acetyltransferase complement(4177904..4178347) Rahnella sp. Y9602 10214862 YP_004214550.1 CDS Rahaq_3834 NC_015061.1 4178316 4178729 R PFAM: DNA polymerase III psi subunit; KEGG: ypb:YPTS_0595 DNA polymerase III subunit psi; DNA polymerase III psi subunit complement(4178316..4178729) Rahnella sp. Y9602 10214863 YP_004214551.1 CDS Rahaq_3835 NC_015061.1 4178869 4179915 D KEGG: yen:YE0561 16S ribosomal RNA m2G1207 methyltransferase; PFAM: methyltransferase small; methyltransferase small domain protein; rRNA (guanine-N(2)-)-methyltransferase 4178869..4179915 Rahnella sp. Y9602 10214864 YP_004214552.1 CDS Rahaq_3836 NC_015061.1 4179920 4180912 R PFAM: aldo/keto reductase; KEGG: eca:ECA0736 aldo/keto reductase; aldo/keto reductase complement(4179920..4180912) Rahnella sp. Y9602 10214865 YP_004214553.1 CDS Rahaq_3837 NC_015061.1 4181038 4181976 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_0647 LysR family transcriptional regulator; LysR family transcriptional regulator 4181038..4181976 Rahnella sp. Y9602 10214866 YP_004214554.1 CDS Rahaq_3838 NC_015061.1 4182626 4182910 R PFAM: protein of unknown function DUF1435; KEGG: spe:Spro_0646 hypothetical protein; hypothetical protein complement(4182626..4182910) Rahnella sp. Y9602 10214870 YP_004214555.1 CDS Rahaq_3839 NC_015061.1 4183214 4184308 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: yen:YE0557 HmsT protein; SMART: GGDEF domain containing protein; diguanylate cyclase 4183214..4184308 Rahnella sp. Y9602 10214871 YP_004214556.1 CDS Rahaq_3840 NC_015061.1 4184909 4185943 D PFAM: RhaT l-rhamnose-proton symport 2; KEGG: eca:ECA0450 rhamnose-proton symporter; RhaT l-rhamnose-proton symport 2 4184909..4185943 Rahnella sp. Y9602 10214872 YP_004214557.1 CDS Rahaq_3841 NC_015061.1 4185972 4186844 R KEGG: ddc:Dd586_0467 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(4185972..4186844) Rahnella sp. Y9602 10214873 YP_004214558.1 CDS Rahaq_3842 NC_015061.1 4186928 4187755 R KEGG: pwa:Pecwa_0500 transcriptional activator RhaS; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(4186928..4187755) Rahnella sp. Y9602 10214874 YP_004214559.1 CDS Rahaq_3843 NC_015061.1 4188096 4189580 D KEGG: eca:ECA0440 rhamnulokinase; TIGRFAM: rhamnulokinase; PFAM: Carbohydrate kinase, FGGY-like; rhamnulokinase 4188096..4189580 Rahnella sp. Y9602 10214875 YP_004214560.1 CDS Rahaq_3844 NC_015061.1 4189577 4190833 D TIGRFAM: L-rhamnose isomerase; KEGG: ses:SARI_03601 L-rhamnose isomerase; PFAM: L-rhamnose isomerase; L-rhamnose isomerase 4189577..4190833 Rahnella sp. Y9602 10214876 YP_004214561.1 CDS Rahaq_3845 NC_015061.1 4190886 4191710 D TIGRFAM: rhamnulose-1-phosphate aldolase; KEGG: pwa:Pecwa_0497 rhamnulose-1-phosphate aldolase; PFAM: class II aldolase/adducin family protein; rhamnulose-1-phosphate aldolase 4190886..4191710 Rahnella sp. Y9602 10214877 YP_004214562.1 CDS Rahaq_3846 NC_015061.1 4191847 4192995 D KEGG: enc:ECL_05075 lactaldehyde reductase; TIGRFAM: lactaldehyde reductase; PFAM: iron-containing alcohol dehydrogenase; lactaldehyde reductase 4191847..4192995 Rahnella sp. Y9602 10214878 YP_004214563.1 CDS Rahaq_3847 NC_015061.1 4193219 4193533 D KEGG: pwa:Pecwa_0496 L-rhamnose 1-epimerase; TIGRFAM: L-rhamnose 1-epimerase; PFAM: protein of unknown function DUF718; L-rhamnose 1-epimerase 4193219..4193533 Rahnella sp. Y9602 10214879 YP_004214564.1 CDS Rahaq_3848 NC_015061.1 4193508 4195682 R KEGG: spe:Spro_4234 hypothetical protein; PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein complement(4193508..4195682) Rahnella sp. Y9602 10214880 YP_004214565.1 CDS Rahaq_3849 NC_015061.1 4195942 4196673 D KEGG: rso:RS02138 hypothetical protein; hypothetical protein 4195942..4196673 Rahnella sp. Y9602 10214881 YP_004214566.1 CDS Rahaq_3850 NC_015061.1 4196741 4198393 R TIGRFAM: dihydroxyacetone kinase; KEGG: ebi:EbC_03690 dihydroxyacetone kinase; PFAM: Dak kinase; Dak phosphatase; dihydroxyacetone kinase complement(4196741..4198393) Rahnella sp. Y9602 10214882 YP_004214567.1 CDS Rahaq_3851 NC_015061.1 4198539 4199906 R TIGRFAM: L-serine dehydratase 1; KEGG: spe:Spro_1629 L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 complement(4198539..4199906) Rahnella sp. Y9602 10214883 YP_004214568.1 CDS Rahaq_3852 NC_015061.1 4200010 4201293 R TIGRFAM: serine transporter; KEGG: yen:YE1473 serine transporter; serine transporter complement(4200010..4201293) Rahnella sp. Y9602 10214884 YP_004214569.1 CDS Rahaq_3853 NC_015061.1 4201881 4202468 D KEGG: spe:Spro_0674 hypothetical protein; hypothetical protein 4201881..4202468 Rahnella sp. Y9602 10214885 YP_004214570.1 CDS Rahaq_3854 NC_015061.1 4202471 4203751 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: spe:Spro_0673 diguanylate cyclase; SMART: GGDEF domain containing protein; diguanylate cyclase 4202471..4203751 Rahnella sp. Y9602 10214886 YP_004214571.1 CDS Rahaq_3855 NC_015061.1 4203767 4204264 D PFAM: OmpA/MotB domain protein; KEGG: spe:Spro_0672 OmpA/MotB domain-containing protein; OmpA/MotB domain-containing protein 4203767..4204264 Rahnella sp. Y9602 10214887 YP_004214572.1 CDS Rahaq_3856 NC_015061.1 4204266 4205138 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: yen:YE4015 transcriptional regulator; LysR family transcriptional regulator complement(4204266..4205138) Rahnella sp. Y9602 10214888 YP_004214573.1 CDS Rahaq_3857 NC_015061.1 4205243 4206025 D TIGRFAM: alpha-acetolactate decarboxylase; KEGG: yen:YE4016 alpha-acetolactate decarboxylase; PFAM: alpha-acetolactate decarboxylase; alpha-acetolactate decarboxylase 4205243..4206025 Rahnella sp. Y9602 10214889 YP_004214574.1 CDS Rahaq_3858 NC_015061.1 4206053 4207729 D KEGG: eta:ETA_00120 acetolactate synthase; TIGRFAM: acetolactate synthase, catabolic; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; acetolactate synthase, catabolic 4206053..4207729 Rahnella sp. Y9602 10214890 YP_004214575.1 CDS Rahaq_3859 NC_015061.1 4207860 4209431 D PFAM: ATPase associated with various cellular activities AAA_5; KEGG: sml:Smlt0496 hypothetical protein; ATPase AAA 4207860..4209431 Rahnella sp. Y9602 10214891 YP_004214576.1 CDS Rahaq_3860 NC_015061.1 4209431 4210705 D PFAM: 5-methylcytosine restriction system component-like protein; KEGG: ppf:Pput_4619 McrBC 5-methylcytosine restriction system component-like protein; 5-methylcytosine restriction system component-like protein 4209431..4210705 Rahnella sp. Y9602 10214892 YP_004214577.1 CDS Rahaq_3861 NC_015061.1 4211040 4211261 D KEGG: ddd:Dda3937_00946 prophage protein; hypothetical protein 4211040..4211261 Rahnella sp. Y9602 10214893 YP_004214578.1 CDS Rahaq_3862 NC_015061.1 4211328 4212464 R KEGG: spe:Spro_3398 outer membrane protein; outer membrane protein complement(4211328..4212464) Rahnella sp. Y9602 10214894 YP_004214579.1 CDS Rahaq_3863 NC_015061.1 4213093 4213428 D KEGG: pwa:Pecwa_0482 hypothetical protein; hypothetical protein 4213093..4213428 Rahnella sp. Y9602 10214895 YP_004214580.1 CDS Rahaq_3864 NC_015061.1 4213406 4214326 R KEGG: esa:ESA_02127 hypothetical protein; hypothetical protein complement(4213406..4214326) Rahnella sp. Y9602 10214896 YP_004214581.1 CDS Rahaq_3865 NC_015061.1 4214776 4215915 D PFAM: beta-lactamase; KEGG: yen:YE1402 beta-lactam binding protein AmpH; beta-lactamase 4214776..4215915 Rahnella sp. Y9602 10214898 YP_004214582.1 CDS Rahaq_3866 NC_015061.1 4216002 4217072 R PFAM: permease YjgP/YjgQ family protein; KEGG: spe:Spro_0564 permease YjgP/YjgQ family protein; YjgP/YjgQ family permease complement(4216002..4217072) Rahnella sp. Y9602 10214899 YP_004214583.1 CDS Rahaq_3867 NC_015061.1 4217072 4218166 R PFAM: permease YjgP/YjgQ family protein; KEGG: sgl:SG2108 transport protein; YjgP/YjgQ family permease complement(4217072..4218166) Rahnella sp. Y9602 10214900 YP_004214584.1 CDS Rahaq_3868 NC_015061.1 4218445 4219956 D KEGG: spe:Spro_0562 leucyl aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein; leucyl aminopeptidase 4218445..4219956 Rahnella sp. Y9602 10214901 YP_004214585.1 CDS Rahaq_3869 NC_015061.1 4220072 4220557 D KEGG: spe:Spro_0561 DNA polymerase III subunit chi; PFAM: DNA polymerase III chi subunit HolC; DNA-directed DNA polymerase 4220072..4220557 Rahnella sp. Y9602 10214902 YP_004214586.1 CDS Rahaq_3870 NC_015061.1 4220550 4223405 D KEGG: yen:YE0498 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase; valyl-tRNA synthetase 4220550..4223405 Rahnella sp. Y9602 10214903 YP_004214587.1 CDS Rahaq_3871 NC_015061.1 4223495 4224511 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cko:CKO_02556 hypothetical protein; LysR family transcriptional regulator complement(4223495..4224511) Rahnella sp. Y9602 10214904 YP_004214588.1 CDS Rahaq_3872 NC_015061.1 4225021 4225977 R PFAM: Fimbrial protein domain-containing protein; KEGG: kpu:KP1_0601 fimbrial adhesin precursor; fimbrial protein domain-containing protein complement(4225021..4225977) Rahnella sp. Y9602 10214905 YP_004214589.1 CDS Rahaq_3873 NC_015061.1 4225992 4228607 R PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: kpu:KP1_0600 long polar fimbrial outer membrane usher protein; fimbrial biogenesis outer membrane usher protein complement(4225992..4228607) Rahnella sp. Y9602 10214906 YP_004214590.1 CDS Rahaq_3874 NC_015061.1 4228655 4229344 R PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: yen:YE1113 fimbrial chaperone protein; Pili assembly chaperone, N-terminal protein complement(4228655..4229344) Rahnella sp. Y9602 10214907 YP_004214591.1 CDS Rahaq_3875 NC_015061.1 4229407 4229916 R PFAM: Fimbrial protein domain-containing protein; KEGG: kpu:KP1_0597 fimbrial protein; fimbrial protein domain-containing protein complement(4229407..4229916) Rahnella sp. Y9602 10214908 YP_004214592.1 CDS Rahaq_3876 NC_015061.1 4229971 4230522 R PFAM: Fimbrial protein domain-containing protein; KEGG: pay:PAU_02406 fimbrial subunit type 1; fimbrial protein domain-containing protein complement(4229971..4230522) Rahnella sp. Y9602 10214909 YP_004214593.1 CDS Rahaq_3877 NC_015061.1 4231241 4232266 R PFAM: peptidase M48 Ste24p; KEGG: pct:PC1_0378 peptidase M48 Ste24p; peptidase M48 Ste24p complement(4231241..4232266) Rahnella sp. Y9602 10214910 YP_004214594.1 CDS Rahaq_3878 NC_015061.1 4232270 4233460 R PFAM: protein of unknown function DUF898 transmembrane; KEGG: eca:ECA0387 hypothetical protein; hypothetical protein complement(4232270..4233460) Rahnella sp. Y9602 10214911 YP_004214595.1 CDS Rahaq_3879 NC_015061.1 4233721 4234224 D PFAM: GCN5-related N-acetyltransferase; KEGG: ypy:YPK_3682 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4233721..4234224 Rahnella sp. Y9602 10214912 YP_004214596.1 CDS Rahaq_3880 NC_015061.1 4234269 4235009 D PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: yen:YE1415 LacI family regulatory protein; RpiR family transcriptional regulator 4234269..4235009 Rahnella sp. Y9602 10214913 YP_004214597.1 CDS Rahaq_3881 NC_015061.1 4235157 4236689 D KEGG: yen:YE1416 PTS-system permease; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; Protein-N(pi)-phosphohistidine--sugar phosphotransferase 4235157..4236689 Rahnella sp. Y9602 10214914 YP_004214598.1 CDS Rahaq_3882 NC_015061.1 4236754 4238187 D PFAM: glycoside hydrolase family 1; KEGG: yen:YE1417 6-phospho-beta-glucosidase; glycoside hydrolase 4236754..4238187 Rahnella sp. Y9602 10214915 YP_004214599.1 CDS Rahaq_3883 NC_015061.1 4238224 4238649 R PFAM: protein of unknown function DUF1260; KEGG: pwa:Pecwa_0426 hypothetical protein; hypothetical protein complement(4238224..4238649) Rahnella sp. Y9602 10214916 YP_004214600.1 CDS Rahaq_3884 NC_015061.1 4238818 4239825 D KEGG: pct:PC1_0374 ornithine carbamoyltransferase subunit I; TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; ornithine carbamoyltransferase 4238818..4239825 Rahnella sp. Y9602 10214917 YP_004214601.1 CDS Rahaq_3885 NC_015061.1 4239986 4241788 D KEGG: vvy:VVA1393 sucrose phosphorylase related protein; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; alpha amylase 4239986..4241788 Rahnella sp. Y9602 10214918 YP_004214602.1 CDS Rahaq_3886 NC_015061.1 4241769 4242239 R PFAM: Conserved hypothetical protein CHP00022; KEGG: dze:Dd1591_3734 hypothetical protein; hypothetical protein complement(4241769..4242239) Rahnella sp. Y9602 10214919 YP_004214603.1 CDS Rahaq_3887 NC_015061.1 4242928 4244148 D TIGRFAM: arginine deiminase; KEGG: ctu:Ctu_04920 arginine deiminase; PFAM: amidinotransferase; arginine deiminase 4242928..4244148 Rahnella sp. Y9602 10214920 YP_004214604.1 CDS Rahaq_3888 NC_015061.1 4244171 4245082 D TIGRFAM: carbamate kinase; KEGG: enc:ECL_00670 carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase; carbamate kinase 4244171..4245082 Rahnella sp. Y9602 10214921 YP_004214605.1 CDS Rahaq_3889 NC_015061.1 4245116 4246123 D TIGRFAM: ornithine carbamoyltransferase; KEGG: ctu:Ctu_04900 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; ornithine carbamoyltransferase 4245116..4246123 Rahnella sp. Y9602 10214922 YP_004214606.1 CDS Rahaq_3890 NC_015061.1 4246176 4247579 D PFAM: C4-dicarboxylate anaerobic carrier-like; KEGG: aha:AHA_4090 transporter; C4-dicarboxylate anaerobic carrier-like protein 4246176..4247579 Rahnella sp. Y9602 10214923 YP_004214607.1 CDS Rahaq_3891 NC_015061.1 4247641 4248147 D PFAM: Arginine repressor-like; KEGG: ddc:Dd586_0384 arginine repressor, ArgR; arginine repressor ArgR 4247641..4248147 Rahnella sp. Y9602 10214924 YP_004214608.1 CDS Rahaq_3892 NC_015061.1 4248214 4248327 D hypothetical protein 4248214..4248327 Rahnella sp. Y9602 10214925 YP_004214609.1 CDS Rahaq_3893 NC_015061.1 4248398 4249333 D KEGG: spe:Spro_0545 aspartate carbamoyltransferase catalytic subunit; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate carbamoyltransferase 4248398..4249333 Rahnella sp. Y9602 10214926 YP_004214610.1 CDS Rahaq_3894 NC_015061.1 4249353 4249817 D KEGG: sew:SeSA_A4712 aspartate carbamoyltransferase regulatory subunit; TIGRFAM: aspartate carbamoyltransferase, regulatory subunit; PFAM: Aspartate carbamoyltransferase regulatory subunit-like; aspartate carbamoyltransferase 4249353..4249817 Rahnella sp. Y9602 10214927 YP_004214611.1 CDS Rahaq_3895 NC_015061.1 4249873 4250259 D KEGG: yen:YE3768 hypothetical protein; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP 4249873..4250259 Rahnella sp. Y9602 10214928 YP_004214612.1 CDS Rahaq_3896 NC_015061.1 4250342 4250872 R KEGG: tet:TTHERM_01553980 hypothetical protein; hypothetical protein complement(4250342..4250872) Rahnella sp. Y9602 10214929 YP_004214613.1 CDS Rahaq_3897 NC_015061.1 4251179 4251709 R KEGG: cce:Ccel_0802 peptidase S16, lon-like protein; hypothetical protein complement(4251179..4251709) Rahnella sp. Y9602 10214930 YP_004214614.1 CDS Rahaq_3898 NC_015061.1 4251706 4251894 R hypothetical protein complement(4251706..4251894) Rahnella sp. Y9602 10214931 YP_004214615.1 CDS Rahaq_3899 NC_015061.1 4251870 4252028 R hypothetical protein complement(4251870..4252028) Rahnella sp. Y9602 10214932 YP_004214616.1 CDS Rahaq_3900 NC_015061.1 4252025 4252375 R KEGG: pap:PSPA7_1429 chemotaxis transducer; hypothetical protein complement(4252025..4252375) Rahnella sp. Y9602 10214933 YP_004214617.1 CDS Rahaq_3901 NC_015061.1 4252348 4252554 R KEGG: phu:Phum_PHUM169820 multidrug resistance protein; hypothetical protein complement(4252348..4252554) Rahnella sp. Y9602 10214934 YP_004214618.1 CDS Rahaq_3902 NC_015061.1 4252551 4254584 R KEGG: ses:SARI_02598 hypothetical protein; hypothetical protein complement(4252551..4254584) Rahnella sp. Y9602 10214935 YP_004214619.1 CDS Rahaq_3903 NC_015061.1 4254657 4256972 R KEGG: ses:SARI_02603 hypothetical protein; TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; PFAM: Protein of unknown function DUF2345; Rhs element Vgr protein complement(4254657..4256972) Rahnella sp. Y9602 10214936 YP_004214620.1 CDS Rahaq_3904 NC_015061.1 4257033 4257179 R hypothetical protein complement(4257033..4257179) Rahnella sp. Y9602 10214937 YP_004214621.1 CDS Rahaq_3905 NC_015061.1 4257366 4258817 D PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: yen:YE3769 hypothetical protein; hypothetical protein 4257366..4258817 Rahnella sp. Y9602 10214938 YP_004214622.1 CDS Rahaq_3906 NC_015061.1 4258811 4259752 D PFAM: protein of unknown function DUF403; KEGG: spe:Spro_0539 hypothetical protein; hypothetical protein 4258811..4259752 Rahnella sp. Y9602 10214939 YP_004214623.1 CDS Rahaq_3907 NC_015061.1 4259752 4260546 D KEGG: spe:Spro_0538 transglutaminase domain-containing protein; PFAM: transglutaminase domain protein; transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein; transglutaminase domain-containing protein 4259752..4260546 Rahnella sp. Y9602 10214940 YP_004214624.1 CDS Rahaq_3908 NC_015061.1 4260573 4261304 D PFAM: 20S proteasome A and B subunits; KEGG: yen:YE3772 hypothetical protein; 20S proteasome subunits A/B 4260573..4261304 Rahnella sp. Y9602 10214941 YP_004214625.1 CDS Rahaq_3909 NC_015061.1 4261404 4262435 D KEGG: enc:ECL_01791 LacI family transcription regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator 4261404..4262435 Rahnella sp. Y9602 10214942 YP_004214626.1 CDS Rahaq_3910 NC_015061.1 4262481 4263491 R PFAM: Outer membrane protein G; KEGG: ses:SARI_03140 hypothetical protein; Outer membrane protein G complement(4262481..4263491) Rahnella sp. Y9602 10214943 YP_004214627.1 CDS Rahaq_3911 NC_015061.1 4263591 4264679 R KEGG: ctu:Ctu_23070 uncharacterized ABC transporter ATP-binding protein YcjV; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter complement(4263591..4264679) Rahnella sp. Y9602 10214944 YP_004214628.1 CDS Rahaq_3912 NC_015061.1 4264689 4265372 R KEGG: ctu:Ctu_23080 beta-phosphoglucomutase; TIGRFAM: beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; beta-phosphoglucomutase complement(4264689..4265372) Rahnella sp. Y9602 10214945 YP_004214629.1 CDS Rahaq_3913 NC_015061.1 4265362 4267608 R PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: cro:ROD_16931 glycosyl hydrolase; glycoside hydrolase complement(4265362..4267608) Rahnella sp. Y9602 10214946 YP_004214630.1 CDS Rahaq_3914 NC_015061.1 4267605 4268663 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ses:SARI_01290 hypothetical protein; oxidoreductase domain-containing protein complement(4267605..4268663) Rahnella sp. Y9602 10214947 YP_004214631.1 CDS Rahaq_3915 NC_015061.1 4268679 4269470 R PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: enc:ECL_01785 xylose isomerase domain-containing protein; xylose isomerase domain-containing protein TIM barrel complement(4268679..4269470) Rahnella sp. Y9602 10214948 YP_004214632.1 CDS Rahaq_3916 NC_015061.1 4269483 4270535 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: ecg:E2348C_1505 predicted oxidoreductase, Zn-dependent and NAD(P)-binding; alcohol dehydrogenase complement(4269483..4270535) Rahnella sp. Y9602 10214949 YP_004214633.1 CDS Rahaq_3917 NC_015061.1 4270579 4271424 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ent:Ent638_2162 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(4270579..4271424) Rahnella sp. Y9602 10214950 YP_004214634.1 CDS Rahaq_3918 NC_015061.1 4271411 4272292 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: enc:ECL_01782 multiple sugar transport system permease protein; binding-protein-dependent transport system inner membrane protein complement(4271411..4272292) Rahnella sp. Y9602 10214951 YP_004214635.1 CDS Rahaq_3919 NC_015061.1 4272323 4273627 R PFAM: extracellular solute-binding protein family 1; KEGG: cro:ROD_16991 ABC transporter periplasmic binding protein; extracellular solute-binding protein complement(4272323..4273627) Rahnella sp. Y9602 10214952 YP_004214636.1 CDS Rahaq_3920 NC_015061.1 4273722 4275401 R KEGG: ebi:EbC_42080 sucrose phosphorylase; PFAM: alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; alpha amylase complement(4273722..4275401) Rahnella sp. Y9602 10214953 YP_004214637.1 CDS Rahaq_3921 NC_015061.1 4275596 4276150 R KEGG: pct:PC1_0532 hypothetical protein; hypothetical protein complement(4275596..4276150) Rahnella sp. Y9602 10214954 YP_004214638.1 CDS Rahaq_3922 NC_015061.1 4276247 4277737 R KEGG: ddc:Dd586_0557 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; altronate dehydratase complement(4276247..4277737) Rahnella sp. Y9602 10214955 YP_004214639.1 CDS Rahaq_3923 NC_015061.1 4277748 4279199 R PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: yen:YE3707 altronate oxidoreductase; mannitol dehydrogenase complement(4277748..4279199) Rahnella sp. Y9602 10214956 YP_004214640.1 CDS Rahaq_3924 NC_015061.1 4279356 4280768 R KEGG: yen:YE3708 glucuronate isomerase; PFAM: glucuronate isomerase; glucuronate isomerase complement(4279356..4280768) Rahnella sp. Y9602 10214957 YP_004214641.1 CDS Rahaq_3925 NC_015061.1 4281739 4283031 D KEGG: spe:Spro_4322 D-galactonate transporter; TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; d-galactonate transporter 4281739..4283031 Rahnella sp. Y9602 10214958 YP_004214642.1 CDS Rahaq_3926 NC_015061.1 4283222 4283998 D KEGG: yen:YE3710 DNA-binding transcriptional repressor ExuR; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 4283222..4283998 Rahnella sp. Y9602 10214959 YP_004214643.1 CDS Rahaq_3927 NC_015061.1 4284382 4285062 D PFAM: SNARE associated Golgi protein; KEGG: spe:Spro_4325 SNARE associated golgi protein; hypothetical protein 4284382..4285062 Rahnella sp. Y9602 10214960 YP_004214644.1 CDS Rahaq_3928 NC_015061.1 4285062 4285445 D KEGG: spe:Spro_4326 hypothetical protein; hypothetical protein 4285062..4285445 Rahnella sp. Y9602 10214961 YP_004214645.1 CDS Rahaq_3929 NC_015061.1 4285575 4285955 D PFAM: protein of unknown function DUF1090; KEGG: spe:Spro_4327 hypothetical protein; hypothetical protein 4285575..4285955 Rahnella sp. Y9602 10214962 YP_004214646.1 CDS Rahaq_3930 NC_015061.1 4286103 4286405 D PFAM: protein of unknown function DUF883 ElaB; KEGG: yen:YE3715 hypothetical protein; hypothetical protein 4286103..4286405 Rahnella sp. Y9602 10214963 YP_004214647.1 CDS Rahaq_3931 NC_015061.1 4286408 4286815 D KEGG: yen:YE3716 hypothetical protein; hypothetical protein 4286408..4286815 Rahnella sp. Y9602 10214964 YP_004214648.1 CDS Rahaq_3932 NC_015061.1 4286812 4287096 D KEGG: yen:YE3717 hypothetical protein; hypothetical protein 4286812..4287096 Rahnella sp. Y9602 10214965 YP_004214649.1 CDS Rahaq_3933 NC_015061.1 4287337 4287729 D PFAM: DoxX family protein; KEGG: eay:EAM_0490 membrane protein; DoxX family protein 4287337..4287729 Rahnella sp. Y9602 10214966 YP_004214650.1 CDS Rahaq_3934 NC_015061.1 4287904 4288887 D KEGG: spe:Spro_4332 hypothetical protein; PFAM: Glutathione S-transferase domain; glutathione transferase 4287904..4288887 Rahnella sp. Y9602 10214967 YP_004214651.1 CDS Rahaq_3935 NC_015061.1 4288929 4289834 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_4333 LysR family transcriptional regulator; LysR family transcriptional regulator complement(4288929..4289834) Rahnella sp. Y9602 10214968 YP_004214652.1 CDS Rahaq_3936 NC_015061.1 4289945 4290649 D PFAM: Pirin domain protein; KEGG: spe:Spro_4334 pirin domain-containing protein; pirin 4289945..4290649 Rahnella sp. Y9602 10214969 YP_004214653.1 CDS Rahaq_3937 NC_015061.1 4291248 4291946 D PFAM: Toxin-coregulated pilus subunit TcpA; KEGG: cro:ROD_46461 type IV pilin; Toxin-coregulated pilus subunit TcpA 4291248..4291946 Rahnella sp. Y9602 10214970 YP_004214654.1 CDS Rahaq_3938 NC_015061.1 4292042 4293709 D KEGG: cro:ROD_46471 type IV pilus biogenesis protein; hypothetical protein 4292042..4293709 Rahnella sp. Y9602 10214971 YP_004214655.1 CDS Rahaq_3939 NC_015061.1 4293768 4294208 D KEGG: cro:ROD_46481 type IV pilus biogenesis protein; type IV pilus biogenesis protein 4293768..4294208 Rahnella sp. Y9602 10214972 YP_004214656.1 CDS Rahaq_3940 NC_015061.1 4294232 4295680 D PFAM: type II and III secretion system protein; KEGG: cro:ROD_46491 type IV pilus biogenesis protein; type II and III secretion system protein 4294232..4295680 Rahnella sp. Y9602 10214973 YP_004214657.1 CDS Rahaq_3941 NC_015061.1 4295699 4296256 D KEGG: cro:ROD_46501 type IV pilus biogenesis protein; type IV pilus biogenesis protein 4295699..4296256 Rahnella sp. Y9602 10214974 YP_004214658.1 CDS Rahaq_3942 NC_015061.1 4296261 4297109 D KEGG: cro:ROD_46511 type IV pilus biogenesis protein; hypothetical protein 4296261..4297109 Rahnella sp. Y9602 10214975 YP_004214659.1 CDS Rahaq_3943 NC_015061.1 4297091 4297594 D KEGG: cro:ROD_46521 type IV pilus biogenesis protein; hypothetical protein 4297091..4297594 Rahnella sp. Y9602 10214976 YP_004214660.1 CDS Rahaq_3944 NC_015061.1 4297591 4299120 D PFAM: type II secretion system protein E; KEGG: cro:ROD_46531 type IV pilus biogenesis protein CfcH; type II secretion system protein E 4297591..4299120 Rahnella sp. Y9602 10214977 YP_004214661.1 CDS Rahaq_3945 NC_015061.1 4299104 4300150 D PFAM: Type II secretion system F domain; KEGG: cro:ROD_46541 type IV pilus biogenesis protein; type II secretion system F domain-containing protein 4299104..4300150 Rahnella sp. Y9602 10214978 YP_004214662.1 CDS Rahaq_3946 NC_015061.1 4300162 4301508 D KEGG: clu:CLUG_00489 hypothetical protein; hypothetical protein 4300162..4301508 Rahnella sp. Y9602 10214979 YP_004214663.1 CDS Rahaq_3947 NC_015061.1 4301564 4302394 D KEGG: cro:ROD_46561 prepillin peptidase CfcP; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; prepilin peptidase 4301564..4302394 Rahnella sp. Y9602 10214980 YP_004214664.1 CDS Rahaq_3948 NC_015061.1 4302398 4303207 D PFAM: Peptidase M23; KEGG: cro:ROD_46571 prepillin peptidase; peptidase M23 4302398..4303207 Rahnella sp. Y9602 10214981 YP_004214665.1 CDS Rahaq_3949 NC_015061.1 4303667 4304536 R PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: yen:YE3726 tetrapyrrole methylase; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase complement(4303667..4304536) Rahnella sp. Y9602 10214983 YP_004214666.1 CDS Rahaq_3950 NC_015061.1 4304598 4306634 D KEGG: spe:Spro_4336 LppC family lipoprotein; LppC family lipoprotein 4304598..4306634 Rahnella sp. Y9602 10214984 YP_004214667.1 CDS Rahaq_3951 NC_015061.1 4306700 4307068 D PFAM: Uncharacterised protein family UPF0102; KEGG: spe:Spro_4337 hypothetical protein; hypothetical protein 4306700..4307068 Rahnella sp. Y9602 10214985 YP_004214668.1 CDS Rahaq_3952 NC_015061.1 4307099 4307689 D PFAM: sugar isomerase (SIS); KEGG: enc:ECL_04531 DnaA initiator-associating protein DiaA; sugar isomerase (SIS) 4307099..4307689 Rahnella sp. Y9602 10214986 YP_004214669.1 CDS Rahaq_3953 NC_015061.1 4307699 4308274 D KEGG: spe:Spro_4339 hypothetical protein; PFAM: transport-associated; SMART: Transport-associated and nodulation region; transport-associated protein 4307699..4308274 Rahnella sp. Y9602 10214987 YP_004214670.1 CDS Rahaq_3954 NC_015061.1 4308354 4309076 R KEGG: ebi:EbC_40430 monofunctional biosynthetic peptidoglycan transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; monofunctional biosynthetic peptidoglycan transglycosylase complement(4308354..4309076) Rahnella sp. Y9602 10214988 YP_004214671.1 CDS Rahaq_3955 NC_015061.1 4309973 4312312 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; response regulator receiver; Hpt domain protein; KEGG: spe:Spro_4342 aerobic respiration control sensor protein ArcB; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver; Hpt domain protein; multi-sensor hybrid histidine kinase complement(4309973..4312312) Rahnella sp. Y9602 10214989 YP_004214672.1 CDS Rahaq_3956 NC_015061.1 4313185 4317642 D KEGG: ypb:YPTS_3687 glutamate synthase subunit alpha; PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase subunit alpha domain protein; glutamate synthase (ferredoxin) 4313185..4317642 Rahnella sp. Y9602 10214990 YP_004214673.1 CDS Rahaq_3957 NC_015061.1 4317652 4319070 D KEGG: dda:Dd703_3634 glutamate synthase subunit beta; TIGRFAM: glutamate synthase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutamate synthase, small subunit 4317652..4319070 Rahnella sp. Y9602 10214991 YP_004214674.1 CDS Rahaq_3958 NC_015061.1 4319233 4319727 R PFAM: Stringent starvation protein B; KEGG: spe:Spro_4346 ClpXP protease specificity-enhancing factor; stringent starvation protein B complement(4319233..4319727) Rahnella sp. Y9602 10214992 YP_004214675.1 CDS Rahaq_3959 NC_015061.1 4319731 4320372 R PFAM: Glutathione S-transferase domain; KEGG: epy:EpC_03140 stringent starvation protein A; glutathione S-transferase complement(4319731..4320372) Rahnella sp. Y9602 10214993 YP_004214676.1 CDS Rahaq_3960 NC_015061.1 4320707 4321099 R PFAM: ribosomal protein S9; KEGG: eca:ECA0307 30S ribosomal protein S9; 30S ribosomal protein S9 complement(4320707..4321099) Rahnella sp. Y9602 10214994 YP_004214677.1 CDS Rahaq_3961 NC_015061.1 4321116 4321544 R KEGG: pam:PANA_0413 RplM; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13; 50S ribosomal protein L13 complement(4321116..4321544) Rahnella sp. Y9602 10214995 YP_004214678.1 CDS Rahaq_3962 NC_015061.1 4321566 4321805 R KEGG: fno:Fnod_0984 DNA-directed DNA polymerase; hypothetical protein complement(4321566..4321805) Rahnella sp. Y9602 10214996 YP_004214679.1 CDS Rahaq_3963 NC_015061.1 4321863 4323002 R PFAM: AFG1-family ATPase; KEGG: spe:Spro_4350 AFG1 family ATPase; AFG1 family ATPase complement(4321863..4323002) Rahnella sp. Y9602 10214997 YP_004214680.1 CDS Rahaq_3964 NC_015061.1 4323288 4323689 D PFAM: protein of unknown function DUF1043; KEGG: pwa:Pecwa_0297 cytochrome d ubiquinol oxidase subunit III; hypothetical protein 4323288..4323689 Rahnella sp. Y9602 10214998 YP_004214681.1 CDS Rahaq_3965 NC_015061.1 4323844 4325211 D SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: spe:Spro_4352 protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 4323844..4325211 Rahnella sp. Y9602 10214999 YP_004214682.1 CDS Rahaq_3966 NC_015061.1 4325233 4326366 D TIGRFAM: periplasmic serine protease DegS; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: esa:ESA_03621 serine endoprotease; SMART: PDZ/DHR/GLGF domain protein; periplasmic serine protease DegS 4325233..4326366 Rahnella sp. Y9602 10215000 YP_004214683.1 CDS Rahaq_3967 NC_015061.1 4326443 4327702 R KEGG: spe:Spro_4354 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(4326443..4327702) Rahnella sp. Y9602 10215001 YP_004214684.1 CDS Rahaq_3968 NC_015061.1 4327770 4328024 R PFAM: BolA family protein; KEGG: spe:Spro_4355 BolA family protein; BolA family protein complement(4327770..4328024) Rahnella sp. Y9602 10215002 YP_004214685.1 CDS Rahaq_3969 NC_015061.1 4328193 4328507 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: spe:Spro_4356 anti-sigma-factor antagonist; anti-sigma-factor antagonist complement(4328193..4328507) Rahnella sp. Y9602 10215003 YP_004214686.1 CDS Rahaq_3970 NC_015061.1 4328504 4329139 R PFAM: toluene tolerance family protein; KEGG: ebi:EbC_40280 toluene tolerance ABC transporter auxiliary subunit; toluene tolerance family protein complement(4328504..4329139) Rahnella sp. Y9602 10215004 YP_004214687.1 CDS Rahaq_3971 NC_015061.1 4329181 4329747 R PFAM: Mammalian cell entry related domain protein; KEGG: ebi:EbC_40290 toluene tolerance ABC transporter periplasmic subunit; mammalian cell entry domain-containing protein complement(4329181..4329747) Rahnella sp. Y9602 10215005 YP_004214688.1 CDS Rahaq_3972 NC_015061.1 4329751 4330533 R PFAM: protein of unknown function DUF140; KEGG: ypb:YPTS_3704 hypothetical protein; hypothetical protein complement(4329751..4330533) Rahnella sp. Y9602 10215006 YP_004214689.1 CDS Rahaq_3973 NC_015061.1 4330549 4331352 R KEGG: yen:YE3752 ABC transporter ATP-binding protein YrbF; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(4330549..4331352) Rahnella sp. Y9602 10215007 YP_004214690.1 CDS Rahaq_3974 NC_015061.1 4331660 4332637 D KEGG: spe:Spro_4361 calcium/sodium:proton antiporter; TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; CaCA family Na+/Ca+ antiporter 4331660..4332637 Rahnella sp. Y9602 10215008 YP_004214691.1 CDS Rahaq_3975 NC_015061.1 4332657 4333643 D TIGRFAM: KpsF/GutQ family protein; KEGG: ebi:EbC_40330 D-arabinose 5-phosphate isomerase; PFAM: sugar isomerase (SIS); CBS domain containing protein; KpsF/GutQ family protein 4332657..4333643 Rahnella sp. Y9602 10215009 YP_004214692.1 CDS Rahaq_3976 NC_015061.1 4333660 4334226 D TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: spe:Spro_4363 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 4333660..4334226 Rahnella sp. Y9602 10215010 YP_004214693.1 CDS Rahaq_3977 NC_015061.1 4334223 4334792 D PFAM: protein of unknown function DUF1239; KEGG: spe:Spro_4364 hypothetical protein; hypothetical protein 4334223..4334792 Rahnella sp. Y9602 10215011 YP_004214694.1 CDS Rahaq_3978 NC_015061.1 4334770 4335327 D KEGG: yen:YE3757 lipopolysaccharide transport periplasmic protein LptA; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; lipopolysaccharide transport periplasmic protein LptA 4334770..4335327 Rahnella sp. Y9602 10215012 YP_004214695.1 CDS Rahaq_3979 NC_015061.1 4335334 4336059 D KEGG: sgl:SG0200 ABC transporter ATP-binding protein YhbG; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 4335334..4336059 Rahnella sp. Y9602 10215013 YP_004214696.1 CDS Rahaq_3980 NC_015061.1 4336161 4337594 D KEGG: spe:Spro_4367 RNA polymerase factor sigma-54; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor; RNA polymerase sigma 54 subunit RpoN 4336161..4337594 Rahnella sp. Y9602 10215014 YP_004214697.1 CDS Rahaq_3981 NC_015061.1 4337618 4337905 D KEGG: spe:Spro_4368 sigma(54) modulation protein; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/ribosomal protein S30EA 4337618..4337905 Rahnella sp. Y9602 10215015 YP_004214698.1 CDS Rahaq_3982 NC_015061.1 4338016 4338486 D KEGG: sgl:SG0197 PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN; TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 4338016..4338486 Rahnella sp. Y9602 10215016 YP_004214699.1 CDS Rahaq_3983 NC_015061.1 4338554 4339408 D KEGG: spe:Spro_4370 hypothetical protein; hypothetical protein 4338554..4339408 Rahnella sp. Y9602 10215017 YP_004214700.1 CDS Rahaq_3984 NC_015061.1 4339405 4339677 D KEGG: yen:YE3763 phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr); TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; phosphotransferase system, phosphocarrier protein HPr 4339405..4339677 Rahnella sp. Y9602 10215018 YP_004214701.1 CDS Rahaq_3985 NC_015061.1 4339703 4341622 R KEGG: yen:YE3777 transcriptional regulator; PFAM: PRD domain protein; M trans-acting positive regulator; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; transcriptional antiterminator BglG complement(4339703..4341622) Rahnella sp. Y9602 10215019 YP_004214702.1 CDS Rahaq_3987 NC_015061.1 4341839 4342579 R PFAM: protein of unknown function DUF1341; KEGG: spe:Spro_4374 hypothetical protein; hypothetical protein complement(4341839..4342579) Rahnella sp. Y9602 10215021 YP_004214703.1 CDS Rahaq_3988 NC_015061.1 4342576 4343703 R KEGG: spe:Spro_4375 pyridoxal phosphate-dependent enzyme; TIGRFAM: pyridoxal phosphate-dependent enzyme; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; pyridoxal phosphate-dependent enzyme complement(4342576..4343703) Rahnella sp. Y9602 10215022 YP_004214704.1 CDS Rahaq_3989 NC_015061.1 4343693 4344826 R PFAM: amidohydrolase; KEGG: yen:YE3781 dihydroorotase; amidohydrolase complement(4343693..4344826) Rahnella sp. Y9602 10215023 YP_004214705.1 CDS Rahaq_3990 NC_015061.1 4344908 4345555 R KEGG: spe:Spro_4377 inner membrane protein; inner membrane protein complement(4344908..4345555) Rahnella sp. Y9602 10215024 YP_004214706.1 CDS Rahaq_3991 NC_015061.1 4345569 4346345 R KEGG: ebi:EbC_04880 inner membrane protein; inner membrane protein complement(4345569..4346345) Rahnella sp. Y9602 10215025 YP_004214707.1 CDS Rahaq_3992 NC_015061.1 4346378 4346677 R KEGG: spe:Spro_4379 hypothetical protein; hypothetical protein complement(4346378..4346677) Rahnella sp. Y9602 10215026 YP_004214708.1 CDS Rahaq_3993 NC_015061.1 4346677 4347042 R KEGG: cko:CKO_03590 hypothetical protein; hypothetical protein complement(4346677..4347042) Rahnella sp. Y9602 10215027 YP_004214709.1 CDS Rahaq_3994 NC_015061.1 4347089 4347439 R KEGG: yen:YE3786 hypothetical protein; manually curated; PFAM: PRD domain protein; PRD domain-containing protein complement(4347089..4347439) Rahnella sp. Y9602 10215028 YP_004214710.1 CDS Rahaq_3995 NC_015061.1 4347839 4348249 D KEGG: spe:Spro_4382 nucleoside diphosphate kinase regulator; GreA/GreB family elongation factor 4347839..4348249 Rahnella sp. Y9602 10215029 YP_004214711.1 CDS Rahaq_3996 NC_015061.1 4348277 4348390 D hypothetical protein 4348277..4348390 Rahnella sp. Y9602 10215030 YP_004214712.1 CDS Rahaq_3997 NC_015061.1 4348955 4349341 R PFAM: cytochrome b562; KEGG: spe:Spro_4383 cytochrome b562; cytochrome b562 complement(4348955..4349341) Rahnella sp. Y9602 10215031 YP_004214713.1 CDS Rahaq_3998 NC_015061.1 4349489 4350835 R PFAM: peptidase U62 modulator of DNA gyrase; KEGG: ypb:YPTS_3727 peptidase PmbA; peptidase U62 modulator of DNA gyrase complement(4349489..4350835) Rahnella sp. Y9602 10215032 YP_004214714.1 CDS Rahaq_3999 NC_015061.1 4351057 4351608 D PFAM: protein of unknown function DUF615; KEGG: spe:Spro_4387 hypothetical protein; hypothetical protein 4351057..4351608 Rahnella sp. Y9602 10215033 YP_004214715.1 CDS Rahaq_4000 NC_015061.1 4351661 4351954 R PFAM: Barstar (barnase inhibitor); KEGG: yen:YE3791 ribonuclease inhibitor; barnase inhibitor complement(4351661..4351954) Rahnella sp. Y9602 10215034 YP_004214716.1 CDS Rahaq_4001 NC_015061.1 4351960 4352406 R PFAM: guanine-specific ribonuclease N1 and T1; KEGG: spe:Spro_4389 guanine-specific ribonuclease N1 and T1; guanine-specific ribonuclease N1 and T1 complement(4351960..4352406) Rahnella sp. Y9602 10215035 YP_004214717.1 CDS Rahaq_4002 NC_015061.1 4352484 4353944 R KEGG: yen:YE3793 succinate-semialdehyde dehydrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; succinate-semialdehyde dehydrogenase complement(4352484..4353944) Rahnella sp. Y9602 10215036 YP_004214718.1 CDS Rahaq_4003 NC_015061.1 4354130 4354711 D PFAM: transferase hexapeptide repeat containing protein; KEGG: ses:SARI_02830 galactoside O-acetyltransferase; transferase hexapeptide repeat containing protein 4354130..4354711 Rahnella sp. Y9602 10215037 YP_004214719.1 CDS Rahaq_4004 NC_015061.1 4354719 4356677 R PFAM: Fusaric acid resistance protein conserved region; KEGG: spe:Spro_4390 p-hydroxybenzoic acid efflux subunit AaeB; fusaric acid resistance protein complement(4354719..4356677) Rahnella sp. Y9602 10215038 YP_004214720.1 CDS Rahaq_4005 NC_015061.1 4356688 4357623 R KEGG: spe:Spro_4391 p-hydroxybenzoic acid efflux subunit AaeA; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(4356688..4357623) Rahnella sp. Y9602 10215039 YP_004214721.1 CDS Rahaq_4006 NC_015061.1 4357631 4357834 R PFAM: protein of unknown function DUF1656; KEGG: spe:Spro_4392 hypothetical protein; hypothetical protein complement(4357631..4357834) Rahnella sp. Y9602 10215040 YP_004214722.1 CDS Rahaq_4007 NC_015061.1 4358108 4359046 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_4393 DNA-binding transcriptional regulator; LysR family transcriptional regulator 4358108..4359046 Rahnella sp. Y9602 10215041 YP_004214723.1 CDS Rahaq_4008 NC_015061.1 4359120 4360565 R PFAM: peptidase U62 modulator of DNA gyrase; KEGG: spe:Spro_4404 protease TldD; peptidase U62 modulator of DNA gyrase complement(4359120..4360565) Rahnella sp. Y9602 10215042 YP_004214724.1 CDS Rahaq_4009 NC_015061.1 4360707 4364534 R KEGG: spe:Spro_4406 hypothetical protein; hypothetical protein complement(4360707..4364534) Rahnella sp. Y9602 10215043 YP_004214725.1 CDS Rahaq_4010 NC_015061.1 4364633 4366102 R KEGG: ddc:Dd586_0269 ribonuclease, Rne/Rng family; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein; ribonuclease, Rne/Rng family complement(4364633..4366102) Rahnella sp. Y9602 10215044 YP_004214726.1 CDS Rahaq_4011 NC_015061.1 4366092 4366685 R KEGG: yen:YE3802 Maf-like protein; TIGRFAM: maf protein; PFAM: Maf family protein; maf protein complement(4366092..4366685) Rahnella sp. Y9602 10215045 YP_004214727.1 CDS Rahaq_4012 NC_015061.1 4366693 4367181 R KEGG: ebi:EbC_40710 rod shape-determining protein; TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD; rod shape-determining protein MreD complement(4366693..4367181) Rahnella sp. Y9602 10215046 YP_004214728.1 CDS Rahaq_4013 NC_015061.1 4367178 4368185 R KEGG: spe:Spro_4410 rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; rod shape-determining protein MreC complement(4367178..4368185) Rahnella sp. Y9602 10215047 YP_004214729.1 CDS Rahaq_4014 NC_015061.1 4368441 4369484 R KEGG: spe:Spro_4411 rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; MreB/Mrl family cell shape determining protein complement(4368441..4369484) Rahnella sp. Y9602 10215048 YP_004214730.1 CDS Rahaq_4015 NC_015061.1 4369840 4371774 R TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: spe:Spro_4412 regulatory protein CsrD; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase complement(4369840..4371774) Rahnella sp. Y9602 10215049 YP_004214731.1 CDS Rahaq_4016 NC_015061.1 4372091 4373092 D PFAM: oxidoreductase molybdopterin binding; KEGG: spe:Spro_4414 sulfite oxidase subunit YedY; oxidoreductase molybdopterin binding protein 4372091..4373092 Rahnella sp. Y9602 10215050 YP_004214732.1 CDS Rahaq_4017 NC_015061.1 4373111 4373713 D PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: yen:YE3809 sulfite oxidase subunit YedZ; ferric reductase domain-containing transmembrane protein 4373111..4373713 Rahnella sp. Y9602 10215051 YP_004214733.1 CDS Rahaq_4018 NC_015061.1 4373955 4374407 D TIGRFAM: 3-dehydroquinate dehydratase, type II; KEGG: spe:Spro_4416 3-dehydroquinate dehydratase; PFAM: dehydroquinase class II; 3-dehydroquinate dehydratase 4373955..4374407 Rahnella sp. Y9602 10215052 YP_004214734.1 CDS Rahaq_4019 NC_015061.1 4374440 4374904 D KEGG: spe:Spro_4417 acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein 4374440..4374904 Rahnella sp. Y9602 10215053 YP_004214735.1 CDS Rahaq_4020 NC_015061.1 4374916 4376265 D KEGG: spe:Spro_4418 acetyl-CoA carboxylase biotin carboxylase subunit; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; acetyl-CoA carboxylase, biotin carboxylase 4374916..4376265 Rahnella sp. Y9602 10215054 YP_004214736.1 CDS Rahaq_4021 NC_015061.1 4376345 4376593 D PFAM: protein of unknown function DUF997; KEGG: ebi:EbC_40800 inner membrane protein; hypothetical protein 4376345..4376593 Rahnella sp. Y9602 10215055 YP_004214737.1 CDS Rahaq_4022 NC_015061.1 4376583 4378028 D KEGG: spe:Spro_4420 sodium/panthothenate symporter; TIGRFAM: sodium/pantothenate symporter; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; sodium/pantothenate symporter 4376583..4378028 Rahnella sp. Y9602 10215056 YP_004214738.1 CDS Rahaq_4023 NC_015061.1 4378072 4378956 D KEGG: yen:YE3815 ribosomal protein L11 methyltransferase; TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase; 50S ribosomal protein L11 methyltransferase 4378072..4378956 Rahnella sp. Y9602 10215057 YP_004214739.1 CDS Rahaq_4024 NC_015061.1 4379117 4379854 D KEGG: pwa:Pecwa_0242 carbonic anhydrase; PFAM: carbonic anhydrase; carbonate dehydratase 4379117..4379854 Rahnella sp. Y9602 10215058 YP_004214740.1 CDS Rahaq_4025 NC_015061.1 4380244 4381209 D KEGG: spe:Spro_4423 tRNA-dihydrouridine synthase B; TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; nifR3 family TIM-barrel protein 4380244..4381209 Rahnella sp. Y9602 10215059 YP_004214741.1 CDS Rahaq_4026 NC_015061.1 4381231 4381527 D PFAM: helix-turn-helix Fis-type; KEGG: etr:ETAE_3152 DNA-binding protein fis; Fis family transcriptional regulator 4381231..4381527 Rahnella sp. Y9602 10215060 YP_004214742.1 CDS Rahaq_4027 NC_015061.1 4381728 4382156 D PFAM: DoxX family protein; KEGG: dze:Dd1591_1247 DoxX family protein; DoxX family protein 4381728..4382156 Rahnella sp. Y9602 10215061 YP_004214743.1 CDS Rahaq_4028 NC_015061.1 4382577 4383497 D KEGG: yen:YE3829 lipid A biosynthesis palmitoleoyl acyltransferase; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: lipid A biosynthesis acyltransferase; lipid A biosynthesis lauroyl acyltransferase 4382577..4383497 Rahnella sp. Y9602 10215062 YP_004214744.1 CDS Rahaq_4029 NC_015061.1 4383584 4383769 D KEGG: pst:PSPTOA0058 hypothetical protein; hypothetical protein 4383584..4383769 Rahnella sp. Y9602 10215063 YP_004214745.1 CDS Rahaq_4030 NC_015061.1 4384186 4385211 D KEGG: yen:YE3833 ABC transporter periplasmic solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 4384186..4385211 Rahnella sp. Y9602 10215064 YP_004214746.1 CDS Rahaq_4031 NC_015061.1 4385315 4386493 D KEGG: yen:YE3834 ABC transporter permease; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 4385315..4386493 Rahnella sp. Y9602 10215065 YP_004214747.1 CDS Rahaq_4032 NC_015061.1 4386539 4387612 D KEGG: yen:YE3835 ABC transporter permease; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 4386539..4387612 Rahnella sp. Y9602 10215066 YP_004214748.1 CDS Rahaq_4033 NC_015061.1 4387621 4388382 D KEGG: yen:YE3836 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 4387621..4388382 Rahnella sp. Y9602 10215067 YP_004214749.1 CDS Rahaq_4034 NC_015061.1 4388775 4389464 R PFAM: LrgB family protein; KEGG: spe:Spro_4427 LrgB family protein; LrgB family protein complement(4388775..4389464) Rahnella sp. Y9602 10215068 YP_004214750.1 CDS Rahaq_4035 NC_015061.1 4389457 4389879 R PFAM: LrgA family protein; KEGG: spe:Spro_4428 LrgA family protein; LrgA family protein complement(4389457..4389879) Rahnella sp. Y9602 10215069 YP_004214751.1 CDS Rahaq_4036 NC_015061.1 4390024 4390902 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: yen:YE3838 LysR family transcriptional regulator; LysR family transcriptional regulator 4390024..4390902 Rahnella sp. Y9602 10215070 YP_004214752.1 CDS Rahaq_4037 NC_015061.1 4390961 4392610 R KEGG: spe:Spro_4430 Na+/H+ antiporter; TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; Na+/H+ antiporter complement(4390961..4392610) Rahnella sp. Y9602 10215071 YP_004214753.1 CDS Rahaq_4038 NC_015061.1 4392879 4394246 R PFAM: Xanthine/uracil/vitamin C permease; KEGG: spe:Spro_4431 xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease complement(4392879..4394246) Rahnella sp. Y9602 10215072 YP_004214754.1 CDS Rahaq_4039 NC_015061.1 4394656 4395324 R PFAM: Glutathione S-transferase domain; KEGG: yen:YE3841 glutathione S transferase; glutathione S-transferase complement(4394656..4395324) Rahnella sp. Y9602 10215073 YP_004214755.1 CDS Rahaq_4040 NC_015061.1 4395593 4397686 D TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; MHYT domain protein; KEGG: ebi:EbC_38160 diguanylate cyclase (GGDEF domain); SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase with MHYT sensor 4395593..4397686 Rahnella sp. Y9602 10215074 YP_004214756.1 CDS Rahaq_4041 NC_015061.1 4397697 4399259 R KEGG: ddd:Dda3937_02872 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(4397697..4399259) Rahnella sp. Y9602 10215075 YP_004214757.1 CDS Rahaq_4042 NC_015061.1 4399495 4400298 R PFAM: inositol monophosphatase; KEGG: atu:Atu4573 inositol monophosphatase family protein; inositol monophosphatase complement(4399495..4400298) Rahnella sp. Y9602 10215076 YP_004214758.1 CDS Rahaq_4043 NC_015061.1 4400456 4401088 D PFAM: lysine exporter protein (LYSE/YGGA); KEGG: ppg:PputGB1_2255 lysine exporter protein LysE/YggA; lysine exporter protein LysE/YggA 4400456..4401088 Rahnella sp. Y9602 10215077 YP_004214759.1 CDS Rahaq_4044 NC_015061.1 4401170 4402258 D PFAM: periplasmic binding protein; KEGG: ebi:EbC_34640 ABC transporter solute-binding protein; periplasmic binding protein 4401170..4402258 Rahnella sp. Y9602 10215078 YP_004214760.1 CDS Rahaq_4045 NC_015061.1 4402306 4403046 D KEGG: ebi:EbC_34650 molybdenum ABC transporter periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; molybdenum ABC transporter periplasmic molybdate-binding protein 4402306..4403046 Rahnella sp. Y9602 10215079 YP_004214761.1 CDS Rahaq_4046 NC_015061.1 4403075 4403932 R KEGG: ebi:EbC_34320 kinase; PFAM: RIO-like kinase; SMART: protein of unknown function RIO1; RIO-like kinase complement(4403075..4403932) Rahnella sp. Y9602 10215080 YP_004214762.1 CDS Rahaq_4047 NC_015061.1 4404380 4405495 D PFAM: Male sterility domain; KEGG: ctu:Ctu_33390 hypothetical protein; hypothetical protein 4404380..4405495 Rahnella sp. Y9602 10215081 YP_004214763.1 CDS Rahaq_4048 NC_015061.1 4405642 4406265 R PFAM: Glutathione S-transferase domain; KEGG: enc:ECL_02211 glutathione S-transferase domain protein; glutathione S-transferase complement(4405642..4406265) Rahnella sp. Y9602 10215082 YP_004214764.1 CDS Rahaq_4049 NC_015061.1 4406301 4406834 R PFAM: GCN5-related N-acetyltransferase; KEGG: mxa:MXAN_5306 acetyltransferase; N-acetyltransferase GCN5 complement(4406301..4406834) Rahnella sp. Y9602 10215083 YP_004214765.1 CDS Rahaq_4050 NC_015061.1 4406920 4407831 R KEGG: yen:YE1743 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(4406920..4407831) Rahnella sp. Y9602 10215084 YP_004214766.1 CDS Rahaq_4051 NC_015061.1 4407987 4408892 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: yen:YE1742 inner membrane protein; hypothetical protein 4407987..4408892 Rahnella sp. Y9602 10215085 YP_004214767.1 CDS Rahaq_4052 NC_015061.1 4409008 4409388 D PFAM: 4-oxalocrotonate tautomerase; KEGG: msl:Msil_3211 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 4409008..4409388 Rahnella sp. Y9602 10215086 YP_004214768.1 CDS Rahaq_4053 NC_015061.1 4409410 4409754 R PFAM: PemK family protein; KEGG: aat:D11S_0906 transcriptional modulator of MazE/toxin, MazF; transcriptional modulator of MazE/toxin MazF complement(4409410..4409754) Rahnella sp. Y9602 10215087 YP_004214769.1 CDS Rahaq_4054 NC_015061.1 4409754 4410002 R KEGG: yen:YE1273 hypothetical protein; hypothetical protein complement(4409754..4410002) Rahnella sp. Y9602 10215088 YP_004214770.1 CDS Rahaq_4055 NC_015061.1 4410125 4410865 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: spe:Spro_3727 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(4410125..4410865) Rahnella sp. Y9602 10215089 YP_004214771.1 CDS Rahaq_4056 NC_015061.1 4410987 4411889 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3728 LysR family transcriptional regulator; LysR family transcriptional regulator 4410987..4411889 Rahnella sp. Y9602 10215090 YP_004214772.1 CDS Rahaq_4057 NC_015061.1 4411944 4412429 D KEGG: pct:PC1_1536 hypothetical protein; hypothetical protein 4411944..4412429 Rahnella sp. Y9602 10215091 YP_004214773.1 CDS Rahaq_4058 NC_015061.1 4412467 4414053 R KEGG: mms:mma_1885 hypothetical protein; hypothetical protein complement(4412467..4414053) Rahnella sp. Y9602 10215092 YP_004214774.1 CDS Rahaq_4059 NC_015061.1 4414179 4415336 R PFAM: FAD dependent oxidoreductase; KEGG: spe:Spro_2318 monooxygenase FAD-binding; FAD dependent oxidoreductase complement(4414179..4415336) Rahnella sp. Y9602 10215093 YP_004214775.1 CDS Rahaq_4060 NC_015061.1 4415637 4417574 R PFAM: metallophosphoesterase; KEGG: cro:ROD_32251 hypothetical protein; metallophosphoesterase complement(4415637..4417574) Rahnella sp. Y9602 10215094 YP_004214776.1 CDS Rahaq_4061 NC_015061.1 4417830 4418519 R TIGRFAM: cysteine protease domain protein, YopT-type; KEGG: hsm:HSM_1489 cysteine protease domain-containing protein; cysteine protease domain protein, YopT-type complement(4417830..4418519) Rahnella sp. Y9602 10215095 YP_004214777.1 CDS Rahaq_4062 NC_015061.1 4418726 4419580 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: spe:Spro_0105 LysR family transcriptional regulator; LysR family transcriptional regulator 4418726..4419580 Rahnella sp. Y9602 10215096 YP_004214778.1 CDS Rahaq_4063 NC_015061.1 4419676 4421094 D PFAM: Amidohydrolase 3; KEGG: ebi:EbC_35430 amidohydrolase 3; amidohydrolase 4419676..4421094 Rahnella sp. Y9602 10215097 YP_004214779.1 CDS Rahaq_4064 NC_015061.1 4421182 4421724 R KEGG: spe:Spro_4439 single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein complement(4421182..4421724) Rahnella sp. Y9602 10215098 YP_004214780.1 CDS Rahaq_4065 NC_015061.1 4422051 4424906 D KEGG: spe:Spro_4440 excinuclease ABC subunit A; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; excinuclease ABC subunit A 4422051..4424906 Rahnella sp. Y9602 10215099 YP_004214781.1 CDS Rahaq_4066 NC_015061.1 4424957 4425712 R KEGG: gca:Galf_0377 hypothetical protein; hypothetical protein complement(4424957..4425712) Rahnella sp. Y9602 10215100 YP_004214782.1 CDS Rahaq_4067 NC_015061.1 4425691 4426731 R KEGG: vap:Vapar_2240 hypothetical protein; hypothetical protein complement(4425691..4426731) Rahnella sp. Y9602 10215101 YP_004214783.1 CDS Rahaq_4068 NC_015061.1 4426813 4427994 R PFAM: glycoside hydrolase family 13 domain protein; esterase; KEGG: dze:Dd1591_1707 esterase; glycoside hydrolase complement(4426813..4427994) Rahnella sp. Y9602 10215102 YP_004214784.1 CDS Rahaq_4069 NC_015061.1 4428110 4429027 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3091 LysR family transcriptional regulator; LysR family transcriptional regulator complement(4428110..4429027) Rahnella sp. Y9602 10215103 YP_004214785.1 CDS Rahaq_4070 NC_015061.1 4429129 4429749 D PFAM: Glutathione S-transferase domain; KEGG: spe:Spro_3092 glutathione S-transferase domain-containing protein; glutathione S-transferase 4429129..4429749 Rahnella sp. Y9602 10215104 YP_004214786.1 CDS Rahaq_4071 NC_015061.1 4429756 4430676 D PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: spe:Spro_3093 pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 4429756..4430676 Rahnella sp. Y9602 10215105 YP_004214787.1 CDS Rahaq_4072 NC_015061.1 4430658 4431011 R KEGG: spe:Spro_4443 hypothetical protein; hypothetical protein complement(4430658..4431011) Rahnella sp. Y9602 10215106 YP_004214788.1 CDS Rahaq_4073 NC_015061.1 4431089 4432504 R TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: enc:ECL_05108 glycoside/pentoside/hexuronide:cation symporter; sugar (Glycoside-Pentoside-Hexuronide) transporter complement(4431089..4432504) Rahnella sp. Y9602 10215107 YP_004214789.1 CDS Rahaq_4074 NC_015061.1 4432551 4433936 R TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: cko:CKO_03136 hypothetical protein; sugar (Glycoside-Pentoside-Hexuronide) transporter complement(4432551..4433936) Rahnella sp. Y9602 10215108 YP_004214790.1 CDS Rahaq_4075 NC_015061.1 4433992 4436028 R PFAM: glycoside hydrolase family 31; KEGG: sed:SeD_A4407 alpha-glucosidase; glycoside hydrolase complement(4433992..4436028) Rahnella sp. Y9602 10215109 YP_004214791.1 CDS Rahaq_4076 NC_015061.1 4436046 4437287 R PFAM: N-acylglucosamine 2-epimerase; KEGG: cko:CKO_03133 hypothetical protein; N-acylglucosamine 2-epimerase complement(4436046..4437287) Rahnella sp. Y9602 10215110 YP_004214792.1 CDS Rahaq_4077 NC_015061.1 4437303 4438181 R PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: ect:ECIAI39_3119 aldolase; deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase complement(4437303..4438181) Rahnella sp. Y9602 10215111 YP_004214793.1 CDS Rahaq_4078 NC_015061.1 4438204 4439100 R KEGG: cro:ROD_38791 phosphogluconate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyisobutyrate dehydrogenase complement(4438204..4439100) Rahnella sp. Y9602 10215112 YP_004214794.1 CDS Rahaq_4079 NC_015061.1 4439272 4440168 D PFAM: PfkB domain protein; KEGG: cro:ROD_38781 sugar kinase; PfkB domain-containing protein 4439272..4440168 Rahnella sp. Y9602 10215113 YP_004214795.1 CDS Rahaq_4080 NC_015061.1 4440205 4440990 D KEGG: cko:CKO_03129 hypothetical protein; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator 4440205..4440990 Rahnella sp. Y9602 10215114 YP_004214796.1 CDS Rahaq_4081 NC_015061.1 4441094 4442287 R PFAM: aminotransferase class I and II; KEGG: dze:Dd1591_0702 aromatic amino acid aminotransferase; class I and II aminotransferase complement(4441094..4442287) Rahnella sp. Y9602 10215115 YP_004214797.1 CDS Rahaq_4082 NC_015061.1 4442513 4442716 D KEGG: pag:PLES_01831 3-ketoacyl-(acyl-carrier-protein) reductase; 3-ketoacyl-ACP reductase 4442513..4442716 Rahnella sp. Y9602 10215116 YP_004214798.1 CDS Rahaq_4083 NC_015061.1 4442778 4443410 R PFAM: protein of unknown function DUF161; KEGG: eca:ECA3669 hypothetical protein; hypothetical protein complement(4442778..4443410) Rahnella sp. Y9602 10215117 YP_004214799.1 CDS Rahaq_4084 NC_015061.1 4443656 4444120 R KEGG: eca:ECA3668 transcription regulator AsnC; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator complement(4443656..4444120) Rahnella sp. Y9602 10215118 YP_004214800.1 CDS Rahaq_4085 NC_015061.1 4444255 4445034 D PFAM: extracellular solute-binding protein family 3; KEGG: spe:Spro_4447 arogenate dehydratase; SMART: extracellular solute-binding protein family 3; arogenate dehydratase 4444255..4445034 Rahnella sp. Y9602 10215119 YP_004214801.1 CDS Rahaq_4086 NC_015061.1 4445038 4446117 R TIGRFAM: alanine racemase; KEGG: spe:Spro_4448 alanine racemase; PFAM: alanine racemase domain protein; alanine racemase complement(4445038..4446117) Rahnella sp. Y9602 10215120 YP_004214802.1 CDS Rahaq_4087 NC_015061.1 4446304 4447710 R TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: ypi:YpsIP31758_3765 replicative DNA helicase; SMART: AAA ATPase; replicative DNA helicase complement(4446304..4447710) Rahnella sp. Y9602 10215121 YP_004214803.1 CDS Rahaq_4088 NC_015061.1 4447893 4448876 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: spe:Spro_4450 quinone oxidoreductase, NADPH-dependent; alcohol dehydrogenase 4447893..4448876 Rahnella sp. Y9602 10215122 YP_004214804.1 CDS Rahaq_4089 NC_015061.1 4449273 4449509 R KEGG: ecz:ECS88_4522 phage shock protein G; TIGRFAM: phage shock protein G; PFAM: shock protein G; phage shock protein G complement(4449273..4449509) Rahnella sp. Y9602 10215123 YP_004214805.1 CDS Rahaq_4090 NC_015061.1 4449702 4450709 R KEGG: epy:EpC_33170 tRNA-dihydrouridine synthase A; TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS; yjbN family TIM-barrel protein complement(4449702..4450709) Rahnella sp. Y9602 10215124 YP_004214806.1 CDS Rahaq_4091 NC_015061.1 4450928 4451482 D PFAM: ferric-uptake regulator; KEGG: yen:YE3853 zinc uptake transcriptional repressor; ferric uptake regulator family protein 4450928..4451482 Rahnella sp. Y9602 10215125 YP_004214807.1 CDS Rahaq_4092 NC_015061.1 4451641 4451850 R PFAM: CsbD family protein; KEGG: sdy:SDY_4529 stress-response protein; CsbD family protein complement(4451641..4451850) Rahnella sp. Y9602 10215126 YP_004214808.1 CDS Rahaq_4093 NC_015061.1 4452040 4453404 R KEGG: spe:Spro_4459 DNA-damage-inducible SOS response protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein complement(4452040..4453404) Rahnella sp. Y9602 10215127 YP_004214809.1 CDS Rahaq_4094 NC_015061.1 4453702 4454310 R KEGG: yen:YE3855 LexA repressor; TIGRFAM: LexA repressor; PFAM: LexA DNA-binding domain protein; Peptidase S24/S26A/S26B, conserved region; LexA family transcriptional regulator complement(4453702..4454310) Rahnella sp. Y9602 10215128 YP_004214810.1 CDS Rahaq_4095 NC_015061.1 4454430 4454798 R PFAM: diacylglycerol kinase; KEGG: ctu:Ctu_37730 diacylglycerol kinase; diacylglycerol kinase complement(4454430..4454798) Rahnella sp. Y9602 10215129 YP_004214811.1 CDS Rahaq_4096 NC_015061.1 4454916 4457399 D PFAM: phospholipid/glycerol acyltransferase; KEGG: spe:Spro_4462 glycerol-3-phosphate acyltransferase; SMART: phospholipid/glycerol acyltransferase; glycerol-3-phosphate O-acyltransferase 4454916..4457399 Rahnella sp. Y9602 10215130 YP_004214812.1 CDS Rahaq_4097 NC_015061.1 4457497 4458408 R KEGG: ebi:EbC_03050 4-hydroxybenzoate octaprenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; 4-hydroxybenzoate polyprenyltransferase complement(4457497..4458408) Rahnella sp. Y9602 10215131 YP_004214813.1 CDS Rahaq_4098 NC_015061.1 4458405 4458944 R KEGG: xbo:XBJ1_4001 chorismate pyruvate lyase; PFAM: Chorismate lyase; chorismate lyase complement(4458405..4458944) Rahnella sp. Y9602 10215132 YP_004214814.1 CDS Rahaq_4099 NC_015061.1 4459034 4459441 R PFAM: Phosphate-starvation-inducible E-like; KEGG: spe:Spro_4475 phosphate-starvation-inducible protein PsiE; Phosphate-starvation-inducible E-like protein complement(4459034..4459441) Rahnella sp. Y9602 10215133 YP_004214815.1 CDS Rahaq_4100 NC_015061.1 4459692 4461338 R KEGG: spe:Spro_4477 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); glucose-6-phosphate isomerase complement(4459692..4461338) Rahnella sp. Y9602 10215134 YP_004214816.1 CDS Rahaq_4101 NC_015061.1 4461863 4463251 D TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; KEGG: spe:Spro_4479 aspartate kinase III; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; aspartate kinase 4461863..4463251 Rahnella sp. Y9602 10215135 YP_004214817.1 CDS Rahaq_4102 NC_015061.1 4463342 4464259 D PFAM: Bile acid:sodium symporter; KEGG: spe:Spro_4480 bile acid:sodium symporter; bile acid:sodium symporter 4463342..4464259 Rahnella sp. Y9602 10215136 YP_004214818.1 CDS Rahaq_4103 NC_015061.1 4464325 4465977 R KEGG: spe:Spro_4483 sodium-dependent inorganic phosphate (Pi) transporter; TIGRFAM: sodium-dependent inorganic phosphate (Pi) transporter; Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein; sodium-dependent inorganic phosphate (Pi) transporter complement(4464325..4465977) Rahnella sp. Y9602 10215137 YP_004214819.1 CDS Rahaq_4104 NC_015061.1 4465993 4466649 R TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: pap:PSPA7_1870 hypothetical protein; HAD-superfamily hydrolase complement(4465993..4466649) Rahnella sp. Y9602 10215138 YP_004214820.1 CDS Rahaq_4105 NC_015061.1 4466646 4467638 R KEGG: ebi:EbC_02940 ABC transporter ATP binding component; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter complement(4466646..4467638) Rahnella sp. Y9602 10215139 YP_004214821.1 CDS Rahaq_4106 NC_015061.1 4467641 4468426 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_4485 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(4467641..4468426) Rahnella sp. Y9602 10215140 YP_004214822.1 CDS Rahaq_4107 NC_015061.1 4468449 4469291 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_4486 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(4468449..4469291) Rahnella sp. Y9602 10215141 YP_004214823.1 CDS Rahaq_4108 NC_015061.1 4469318 4470115 R PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: spe:Spro_4487 hypothetical protein; type I phosphodiesterase/nucleotide pyrophosphatase complement(4469318..4470115) Rahnella sp. Y9602 10215142 YP_004214824.1 CDS Rahaq_4109 NC_015061.1 4470197 4471255 R PFAM: extracellular solute-binding protein family 1; KEGG: spe:Spro_4488 extracellular solute-binding protein; extracellular solute-binding protein complement(4470197..4471255) Rahnella sp. Y9602 10215143 YP_004214825.1 CDS Rahaq_4110 NC_015061.1 4471458 4472168 D KEGG: spe:Spro_4489 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 4471458..4472168 Rahnella sp. Y9602 10215144 YP_004214826.1 CDS Rahaq_4111 NC_015061.1 4472318 4476019 R KEGG: yen:YE3875 B12-dependent methionine synthase; TIGRFAM: methionine synthase; PFAM: homocysteine S-methyltransferase; dihydropteroate synthase DHPS; methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; Vitamin B12 dependent methionine synthase activation region; methionine synthase complement(4472318..4476019) Rahnella sp. Y9602 10215145 YP_004214827.1 CDS Rahaq_4112 NC_015061.1 4476267 4477109 D KEGG: yen:YE3876 transcriptional repressor IclR; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; IclR family transcriptional regulator 4476267..4477109 Rahnella sp. Y9602 10215146 YP_004214828.1 CDS Rahaq_4113 NC_015061.1 4477155 4478867 R KEGG: spe:Spro_4501 bifunctional isocitrate dehydrogenase kinase/phosphatase protein; PFAM: Isocitrate dehydrogenase kinasephosphatase; (isocitrate dehydrogenase) kinase complement(4477155..4478867) Rahnella sp. Y9602 10215147 YP_004214829.1 CDS Rahaq_4114 NC_015061.1 4478920 4480242 R KEGG: ypb:YPTS_3842 isocitrate lyase; TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; isocitrate lyase complement(4478920..4480242) Rahnella sp. Y9602 10215148 YP_004214830.1 CDS Rahaq_4115 NC_015061.1 4480282 4481880 R TIGRFAM: malate synthase A; KEGG: spe:Spro_4503 malate synthase; PFAM: Malate synthase family protein; malate synthase A complement(4480282..4481880) Rahnella sp. Y9602 10215149 YP_004214831.1 CDS Rahaq_4116 NC_015061.1 4482255 4483184 R TIGRFAM: homoserine O-succinyltransferase; KEGG: pct:PC1_3780 homoserine O-succinyltransferase; PFAM: homoserine O-succinyltransferase; homoserine O-succinyltransferase complement(4482255..4483184) Rahnella sp. Y9602 10215150 YP_004214832.1 CDS Rahaq_4117 NC_015061.1 4489274 4490863 D SMART: AICARFT/IMPCHase bienzyme formylation region; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; KEGG: ypb:YPTS_0321 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 4489274..4490863 Rahnella sp. Y9602 10215155 YP_004214833.1 CDS Rahaq_4118 NC_015061.1 4490909 4492198 D TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: yen:YE0302 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; phosphoribosylamine--glycine ligase 4490909..4492198 Rahnella sp. Y9602 10215156 YP_004214834.1 CDS Rahaq_4119 NC_015061.1 4492418 4493113 R PFAM: protein of unknown function DUF1481; KEGG: yen:YE0301 hypothetical protein; hypothetical protein complement(4492418..4493113) Rahnella sp. Y9602 10215157 YP_004214835.1 CDS Rahaq_4120 NC_015061.1 4493123 4493395 R KEGG: spe:Spro_0290 transcriptional regulator HU subunit alpha; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; histone family protein DNA-binding protein complement(4493123..4493395) Rahnella sp. Y9602 10215158 YP_004214836.1 CDS Rahaq_4121 NC_015061.1 4493586 4494176 R PFAM: protein of unknown function DUF416; KEGG: spe:Spro_0289 hypothetical protein; hypothetical protein complement(4493586..4494176) Rahnella sp. Y9602 10215159 YP_004214837.1 CDS Rahaq_4122 NC_015061.1 4494247 4494927 R KEGG: ddd:Dda3937_00239 endonuclease V (deoxyinosine 3'endoduclease); PFAM: Endonuclease V; Deoxyribonuclease V complement(4494247..4494927) Rahnella sp. Y9602 10215160 YP_004214838.1 CDS Rahaq_4123 NC_015061.1 4494937 4496001 R TIGRFAM: uroporphyrinogen decarboxylase; KEGG: spe:Spro_0287 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase complement(4494937..4496001) Rahnella sp. Y9602 10215161 YP_004214839.1 CDS Rahaq_4124 NC_015061.1 4496073 4496849 R KEGG: ypb:YPTS_0313 NADH pyrophosphatase; PFAM: NUDIX hydrolase; NADH pyrophosphatase-like ; Zinc ribbon NADH pyrophosphatase; NAD(+) diphosphatase complement(4496073..4496849) Rahnella sp. Y9602 10215162 YP_004214840.1 CDS Rahaq_4125 NC_015061.1 4496949 4497464 D PFAM: regulator of RNA polymerase sigma(70) subunit Rsd/AlgQ; KEGG: yen:YE0295 anti-RNA polymerase sigma 70 factor; regulator of RpoD, Rsd/AlgQ 4496949..4497464 Rahnella sp. Y9602 10215163 YP_004214841.1 CDS Rahaq_4126 NC_015061.1 4497787 4499751 D KEGG: eca:ECA0232 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; thiamine biosynthesis protein ThiC 4497787..4499751 Rahnella sp. Y9602 10215164 YP_004214842.1 CDS Rahaq_4127 NC_015061.1 4499748 4500401 D KEGG: dze:Dd1591_3871 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 4499748..4500401 Rahnella sp. Y9602 10215165 YP_004214843.1 CDS Rahaq_4128 NC_015061.1 4500394 4501143 D PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: spe:Spro_0282 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein 4500394..4501143 Rahnella sp. Y9602 10215166 YP_004214844.1 CDS Rahaq_4129 NC_015061.1 4501140 4501340 D KEGG: spe:Spro_0281 sulfur carrier protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; thiamine biosynthesis protein ThiS 4501140..4501340 Rahnella sp. Y9602 10215167 YP_004214845.1 CDS Rahaq_4130 NC_015061.1 4501342 4502121 D PFAM: thiazole biosynthesis family protein; KEGG: spe:Spro_0280 thiazole synthase; thiazole biosynthesis family protein 4501342..4502121 Rahnella sp. Y9602 10215168 YP_004214846.1 CDS Rahaq_4131 NC_015061.1 4502118 4503296 D KEGG: yen:YE0289 thiamine biosynthesis protein ThiH; TIGRFAM: thiazole biosynthesis protein ThiH; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; thiazole biosynthesis protein ThiH 4502118..4503296 Rahnella sp. Y9602 10215169 YP_004214847.1 CDS Rahaq_4132 NC_015061.1 4503528 4507748 R TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase subunit alpha; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; KEGG: spe:Spro_0278 DNA-directed RNA polymerase subunit beta'; SMART: RNA polymerase I subunit A domain protein; DNA-directed RNA polymerase subunit beta' complement(4503528..4507748) Rahnella sp. Y9602 10215170 YP_004214848.1 CDS Rahaq_4133 NC_015061.1 4507840 4511868 R KEGG: spe:Spro_0277 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, subunit beta; PFAM: RNA polymerase Rpb2 domain 6; DNA-directed RNA polymerase, subunit beta, external 1 domain; RNA polymerase Rpb2 domain 3; RNA polymerase subunit beta; RNA polymerase Rpb2 domain 2; RNA polymerase Rpb2 domain 7; DNA-directed RNA polymerase subunit beta complement(4507840..4511868) Rahnella sp. Y9602 10215171 YP_004214849.1 CDS Rahaq_4134 NC_015061.1 4512201 4512566 R KEGG: ebi:EbC_02580 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; 50S ribosomal protein L7/L12 complement(4512201..4512566) Rahnella sp. Y9602 10215172 YP_004214850.1 CDS Rahaq_4135 NC_015061.1 4512633 4513130 R PFAM: ribosomal protein L10; KEGG: dze:Dd1591_3887 50S ribosomal protein L10; 50S ribosomal protein L10 complement(4512633..4513130) Rahnella sp. Y9602 10215173 YP_004214851.1 CDS Rahaq_4136 NC_015061.1 4513468 4514172 R KEGG: sdy:SDY_3744 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1; 50S ribosomal protein L1 complement(4513468..4514172) Rahnella sp. Y9602 10215174 YP_004214852.1 CDS Rahaq_4137 NC_015061.1 4514176 4514604 R TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11-like; KEGG: spe:Spro_0273 50S ribosomal protein L11; SMART: ribosomal protein L11; 50S ribosomal protein L11 complement(4514176..4514604) Rahnella sp. Y9602 10215175 YP_004214853.1 CDS Rahaq_4138 NC_015061.1 4514780 4515325 R TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain-containing protein; KOW domain protein; KEGG: sgl:SG0129 transcription antitermination protein NusG; SMART: NGN domain-containing protein; KOW domain protein; NusG antitermination factor complement(4514780..4515325) Rahnella sp. Y9602 10215176 YP_004214854.1 CDS Rahaq_4139 NC_015061.1 4515325 4515708 R KEGG: spe:Spro_0271 preprotein translocase subunit SecE; TIGRFAM: preprotein translocase SecE subunit; PFAM: protein secE/sec61-gamma protein; preprotein translocase subunit SecE complement(4515325..4515708) Rahnella sp. Y9602 10215177 YP_004214855.1 CDS Rahaq_4140 NC_015061.1 4515962 4517146 R KEGG: spe:Spro_4548 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein; translation elongation factor Tu complement(4515962..4517146) Rahnella sp. Y9602 10215178 YP_004214856.1 CDS Rahaq_4141 NC_015061.1 4518109 4518645 D PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE0277 acetyltransferase; N-acetyltransferase GCN5 4518109..4518645 Rahnella sp. Y9602 10215183 YP_004214857.1 CDS Rahaq_4142 NC_015061.1 4518863 4519813 D KEGG: yen:YE0276 pantothenate kinase; manually curated; TIGRFAM: pantothenate kinase; pantothenate kinase 4518863..4519813 Rahnella sp. Y9602 10215184 YP_004214858.1 CDS Rahaq_4143 NC_015061.1 4519866 4520825 R TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; biotin operon repressor; KEGG: yen:YE0275 biotin--protein ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein; bifunctional biotin operon repressor/biotin--acetyl-CoA-carboxylase ligase BirA complement(4519866..4520825) Rahnella sp. Y9602 10215185 YP_004214859.1 CDS Rahaq_4144 NC_015061.1 4520822 4521859 R KEGG: ddc:Dd586_0205 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain-containing protein; FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase complement(4520822..4521859) Rahnella sp. Y9602 10215186 YP_004214860.1 CDS Rahaq_4145 NC_015061.1 4527586 4528125 R KEGG: spe:Spro_0266 protoporphyrinogen oxidase; protoporphyrinogen oxidase complement(4527586..4528125) Rahnella sp. Y9602 10215191 YP_004214861.1 CDS Rahaq_4146 NC_015061.1 4528148 4529599 R KEGG: ypb:YPTS_0286 potassium transporter; TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; TrkH family potassium uptake protein complement(4528148..4529599) Rahnella sp. Y9602 10215192 YP_004214862.1 CDS Rahaq_4147 NC_015061.1 4529637 4530248 R PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; Uncharacterised protein family UPF0029, Impact, C-terminal; KEGG: spe:Spro_0264 hypothetical protein; hypothetical protein complement(4529637..4530248) Rahnella sp. Y9602 10215193 YP_004214863.1 CDS Rahaq_4148 NC_015061.1 4530248 4531579 R PFAM: peptidase M24; KEGG: spe:Spro_0263 proline dipeptidase; peptidase M24 complement(4530248..4531579) Rahnella sp. Y9602 10215194 YP_004214864.1 CDS Rahaq_4149 NC_015061.1 4531769 4533961 D KEGG: spe:Spro_0261 multifunctional fatty acid oxidation complex subunit alpha; TIGRFAM: fatty oxidation complex, subunit alpha FadB; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; fatty oxidation complex, subunit alpha FadB 4531769..4533961 Rahnella sp. Y9602 10215195 YP_004214865.1 CDS Rahaq_4150 NC_015061.1 4533973 4535136 D KEGG: spe:Spro_0260 3-ketoacyl-CoA thiolase; TIGRFAM: acetyl-CoA C-acyltransferase FadA; acetyl-CoA acetyltransferase; PFAM: Thiolase-like; acetyl-CoA C-acyltransferase FadA 4533973..4535136 Rahnella sp. Y9602 10215196 YP_004214866.1 CDS Rahaq_4151 NC_015061.1 4535253 4535954 R PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: spe:Spro_0259 FMN reductase; oxidoreductase FAD/NAD(P)-binding domain-containing protein complement(4535253..4535954) Rahnella sp. Y9602 10215197 YP_004214867.1 CDS Rahaq_4152 NC_015061.1 4536003 4537493 R KEGG: spe:Spro_0258 3-octaprenyl-4-hydroxybenzoate decarboxylase; TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; UbiD family decarboxylase complement(4536003..4537493) Rahnella sp. Y9602 10215198 YP_004214868.1 CDS Rahaq_4153 NC_015061.1 4537688 4538413 R KEGG: spe:Spro_0257 peptidase E; PFAM: peptidase S51 dipeptidase E; dipeptidase E complement(4537688..4538413) Rahnella sp. Y9602 10215199 YP_004214869.1 CDS Rahaq_4154 NC_015061.1 4538535 4539074 D TIGRFAM: transcriptional activator RfaH; PFAM: NGN domain-containing protein; KEGG: cko:CKO_00183 transcriptional activator RfaH; SMART: NGN domain-containing protein; transcriptional acivator RfaH 4538535..4539074 Rahnella sp. Y9602 10215200 YP_004214870.1 CDS Rahaq_4155 NC_015061.1 4539136 4539927 R PFAM: TatD-related deoxyribonuclease; KEGG: spe:Spro_0254 DNase TatD; TatD-related deoxyribonuclease complement(4539136..4539927) Rahnella sp. Y9602 10215201 YP_004214871.1 CDS Rahaq_4156 NC_015061.1 4539988 4540755 R KEGG: spe:Spro_0253 twin-arginine protein translocation system subunit TatC; TIGRFAM: Sec-independent protein translocase TatC subunit; PFAM: Sec-independent periplasmic protein translocase; Sec-independent protein translocase subunit TatC complement(4539988..4540755) Rahnella sp. Y9602 10215202 YP_004214872.1 CDS Rahaq_4157 NC_015061.1 4540758 4541405 R TIGRFAM: twin-arginine translocation protein, TatB subunit; KEGG: yen:YE0260 sec-independent protein translocase protein TatB; twin-arginine translocation protein subunit TatB complement(4540758..4541405) Rahnella sp. Y9602 10215203 YP_004214873.1 CDS Rahaq_4158 NC_015061.1 4541409 4541675 R KEGG: ses:SARI_03684 twin arginine translocase protein A; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; twin-arginine translocation protein, TatA/E family subunit complement(4541409..4541675) Rahnella sp. Y9602 10215204 YP_004214874.1 CDS Rahaq_4159 NC_015061.1 4541749 4543380 R KEGG: spe:Spro_0250 ubiquinone biosynthesis protein UbiB; TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain-containing protein; 2-polyprenylphenol 6-hydroxylase complement(4541749..4543380) Rahnella sp. Y9602 10215205 YP_004214875.1 CDS Rahaq_4160 NC_015061.1 4543377 4543985 R PFAM: Sterol-binding domain protein; KEGG: spe:Spro_0249 sterol-binding domain-containing protein; Sterol-binding domain-containing protein complement(4543377..4543985) Rahnella sp. Y9602 10215206 YP_004214876.1 CDS Rahaq_4161 NC_015061.1 4543999 4544754 R KEGG: ypb:YPTS_0271 ubiquinone/menaquinone biosynthesis methyltransferase; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase complement(4543999..4544754) Rahnella sp. Y9602 10215207 YP_004214877.1 CDS Rahaq_4162 NC_015061.1 4544896 4546437 R PFAM: protein of unknown function DUF195; KEGG: ypb:YPTS_0270 hypothetical protein; hypothetical protein complement(4544896..4546437) Rahnella sp. Y9602 10215208 YP_004214878.1 CDS Rahaq_4163 NC_015061.1 4546595 4547122 R KEGG: ypy:YPK_3947 hypothetical protein; hypothetical protein complement(4546595..4547122) Rahnella sp. Y9602 10215209 YP_004214879.1 CDS Rahaq_4164 NC_015061.1 4547288 4548049 R KEGG: etr:ETAE_0143 uridine phosphorylase; TIGRFAM: uridine phosphorylase; PFAM: purine or other phosphorylase family 1; uridine phosphorylase complement(4547288..4548049) Rahnella sp. Y9602 10215210 YP_004214880.1 CDS Rahaq_4165 NC_015061.1 4548273 4550615 R KEGG: ebi:EbC_18710 catalase, hydroxyperoxidase II; PFAM: Catalase related subgroup; Catalase domain protein; catalase complement(4548273..4550615) Rahnella sp. Y9602 10215211 YP_004214881.1 CDS Rahaq_4166 NC_015061.1 4550739 4551566 D KEGG: spe:Spro_0243 carboxymethylenebutenolidase; Carboxymethylenebutenolidase 4550739..4551566 Rahnella sp. Y9602 10215212 YP_004214882.1 CDS Rahaq_4167 NC_015061.1 4551660 4552322 R TIGRFAM: transaldolase; KEGG: yen:YE1979 fructose-6-phosphate aldolase; PFAM: Transaldolase; transaldolase complement(4551660..4552322) Rahnella sp. Y9602 10215213 YP_004214883.1 CDS Rahaq_4168 NC_015061.1 4552334 4554838 R KEGG: yps:YPTB0545 PTS family enzyme I phosphohistidine subunit; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; phosphoryl transfer system HPr; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphoenolpyruvate-protein phosphotransferase complement(4552334..4554838) Rahnella sp. Y9602 10215214 YP_004214884.1 CDS Rahaq_4169 NC_015061.1 4555206 4556285 D KEGG: ypy:YPK_3658 fructose-like permease EIIC subunit 2; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; PTS system fructose subfamily transporter subunit IIC 4555206..4556285 Rahnella sp. Y9602 10215215 YP_004214885.1 CDS Rahaq_4170 NC_015061.1 4556303 4556632 D TIGRFAM: PTS system, fructose-specific, IIB subunnit; KEGG: ypy:YPK_3659 PTS system fructose-like transporter subunit EIIB; PTS system fructose-specific transporter subunit IIB 4556303..4556632 Rahnella sp. Y9602 10215216 YP_004214886.1 CDS Rahaq_4171 NC_015061.1 4556649 4558946 D TIGRFAM: pyruvate formate-lyase; KEGG: ecz:ECS88_4406 formate acetyltransferase 2; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; pyruvate formate-lyase 4556649..4558946 Rahnella sp. Y9602 10215217 YP_004214887.1 CDS Rahaq_4172 NC_015061.1 4558912 4559799 D TIGRFAM: glycyl-radical enzyme activating protein family; KEGG: kpu:KP1_1988 pyruvate formate lyase II activase; PFAM: Radical SAM domain protein; glycyl-radical enzyme activating protein family 4558912..4559799 Rahnella sp. Y9602 10215218 YP_004214888.1 CDS Rahaq_4173 NC_015061.1 4559824 4560168 D TIGRFAM: PTS system, fructose-specific, IIB subunnit; KEGG: cko:CKO_03041 fructose-like phosphotransferase EIIB subunit 3; PTS system fructose-specific transporter subunit IIB 4559824..4560168 Rahnella sp. Y9602 10215219 YP_004214889.1 CDS Rahaq_4174 NC_015061.1 4560172 4561035 R KEGG: cko:CKO_03040 hypothetical protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(4560172..4561035) Rahnella sp. Y9602 10215220 YP_004214890.1 CDS Rahaq_4175 NC_015061.1 4561333 4563612 R TIGRFAM: 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; KEGG: spe:Spro_0242 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; PFAM: methionine synthase vitamin-B12 independent; Cobalamin-independent synthase MetE domain protein; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase complement(4561333..4563612) Rahnella sp. Y9602 10215221 YP_004214891.1 CDS Rahaq_4176 NC_015061.1 4563717 4564652 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ddd:Dda3937_02052 DNA-binding protein transcriptional activator, homocysteine-binding protein; LysR family transcriptional regulator 4563717..4564652 Rahnella sp. Y9602 10215222 YP_004214892.1 CDS Rahaq_4177 NC_015061.1 4564558 4565457 R KEGG: yen:YE0247 hypothetical protein; TIGRFAM: carboxylate/amino acid/amine transporter; PFAM: protein of unknown function DUF6 transmembrane; carboxylate/amino acid/amine transporter complement(4564558..4565457) Rahnella sp. Y9602 10215223 YP_004214893.1 CDS Rahaq_4178 NC_015061.1 4565671 4565973 D KEGG: ddi:DDB_G0271606 hypothetical protein; hypothetical protein 4565671..4565973 Rahnella sp. Y9602 10215224 YP_004214894.1 CDS Rahaq_4179 NC_015061.1 4566227 4566901 D KEGG: ent:Ent638_2116 hypothetical protein; hypothetical protein 4566227..4566901 Rahnella sp. Y9602 10215225 YP_004214895.1 CDS Rahaq_4180 NC_015061.1 4566953 4567693 R PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: spe:Spro_0238 cytoplasmic glycerophosphodiester phosphodiesterase; glycerophosphoryl diester phosphodiesterase complement(4566953..4567693) Rahnella sp. Y9602 10215226 YP_004214896.1 CDS Rahaq_4181 NC_015061.1 4567696 4568769 R KEGG: spe:Spro_0237 glycerol-3-phosphate transporter ATP-binding subunit; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter complement(4567696..4568769) Rahnella sp. Y9602 10215227 YP_004214897.1 CDS Rahaq_4182 NC_015061.1 4568776 4569621 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE0243 glycerol-3-phosphate transporter membrane protein; binding-protein-dependent transport system inner membrane protein complement(4568776..4569621) Rahnella sp. Y9602 10215228 YP_004214898.1 CDS Rahaq_4183 NC_015061.1 4569618 4570505 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_0235 glycerol-3-phosphate transporter permease; binding-protein-dependent transport system inner membrane protein complement(4569618..4570505) Rahnella sp. Y9602 10215229 YP_004214899.1 CDS Rahaq_4184 NC_015061.1 4570687 4572000 R PFAM: extracellular solute-binding protein family 1; KEGG: kpe:KPK_0300 glycerol-3-phosphate transporter periplasmic binding protein; extracellular solute-binding protein complement(4570687..4572000) Rahnella sp. Y9602 10215230 YP_004214900.1 CDS Rahaq_4185 NC_015061.1 4572203 4572682 R KEGG: ses:SARI_03127 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; type VI secretion system effector complement(4572203..4572682) Rahnella sp. Y9602 10215231 YP_004214901.1 CDS Rahaq_4186 NC_015061.1 4572698 4572946 R KEGG: sua:Saut_0035 heavy metal efflux pump, CzcA family; hypothetical protein complement(4572698..4572946) Rahnella sp. Y9602 10215232 YP_004214902.1 CDS Rahaq_4187 NC_015061.1 4572933 4573613 R KEGG: ses:SARI_03125 hypothetical protein; hypothetical protein complement(4572933..4573613) Rahnella sp. Y9602 10215233 YP_004214903.1 CDS Rahaq_4188 NC_015061.1 4573893 4575080 R PFAM: aminotransferase class I and II; KEGG: spe:Spro_0233 GntR family transcriptional regulator; GntR family transcriptional regulator complement(4573893..4575080) Rahnella sp. Y9602 10215234 YP_004214904.1 CDS Rahaq_4189 NC_015061.1 4575212 4575913 R KEGG: pwa:Pecwa_0102 leucine/isoleucine/valine transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(4575212..4575913) Rahnella sp. Y9602 10215235 YP_004214905.1 CDS Rahaq_4190 NC_015061.1 4575941 4576711 R KEGG: yen:YE0233 leucine/isoleucine/valine transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(4575941..4576711) Rahnella sp. Y9602 10215236 YP_004214906.1 CDS Rahaq_4191 NC_015061.1 4576708 4577997 R PFAM: inner-membrane translocator; KEGG: yen:YE0232 leucine/isoleucine/valine transporter permease subunit; inner-membrane translocator complement(4576708..4577997) Rahnella sp. Y9602 10215237 YP_004214907.1 CDS Rahaq_4192 NC_015061.1 4577994 4578920 R PFAM: inner-membrane translocator; KEGG: ebi:EbC_42440 high-affinity branched-chain amino acid ABC transporter permease protein; inner-membrane translocator complement(4577994..4578920) Rahnella sp. Y9602 10215238 YP_004214908.1 CDS Rahaq_4193 NC_015061.1 4579083 4580195 R PFAM: Extracellular ligand-binding receptor; KEGG: yen:YE0230 branched-chain amino acid-binding protein; extracellular ligand-binding receptor complement(4579083..4580195) Rahnella sp. Y9602 10215239 YP_004214909.1 CDS Rahaq_4194 NC_015061.1 4580599 4580979 D PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_0227 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4580599..4580979 Rahnella sp. Y9602 10215240 YP_004214910.1 CDS Rahaq_4195 NC_015061.1 4581057 4581914 R KEGG: spe:Spro_0224 RNA polymerase factor sigma-32; TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; RNA polymerase sigma-32 subunit RpoH complement(4581057..4581914) Rahnella sp. Y9602 10215241 YP_004214911.1 CDS Rahaq_4196 NC_015061.1 4582232 4583212 R KEGG: spe:Spro_0223 cell division protein FtsX; TIGRFAM: protein insertion ABC transporter inner membrane subunit FtsX; PFAM: protein of unknown function DUF214; protein insertion ABC transporter inner membrane subunit FtsX complement(4582232..4583212) Rahnella sp. Y9602 10215242 YP_004214912.1 CDS Rahaq_4197 NC_015061.1 4583212 4583874 R TIGRFAM: Type II (General) Secretory Pathway (IISP) Family protein; cell division ATP-binding protein FtsE; PFAM: ABC transporter related; KEGG: sgl:SG0085 cell division protein FtsE; SMART: AAA ATPase; Type II (General) Secretory Pathway (IISP) Family protein complement(4583212..4583874) Rahnella sp. Y9602 10215243 YP_004214913.1 CDS Rahaq_4198 NC_015061.1 4583880 4585361 R TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: spe:Spro_0221 signal recognition particle-docking protein FtsY; SMART: AAA ATPase; signal recognition particle-docking protein FtsY complement(4583880..4585361) Rahnella sp. Y9602 10215244 YP_004214914.1 CDS Rahaq_4199 NC_015061.1 4585588 4586199 D TIGRFAM: methyltransferase; KEGG: spe:Spro_0220 16S rRNA m(2)G966-methyltransferase; PFAM: Conserved hypothetical protein CHP00095; methyltransferase 4585588..4586199 Rahnella sp. Y9602 10215245 YP_004214915.1 CDS Rahaq_4200 NC_015061.1 4586201 4586479 D PFAM: protein of unknown function DUF1145; KEGG: spe:Spro_0219 hypothetical protein; hypothetical protein 4586201..4586479 Rahnella sp. Y9602 10215246 YP_004214916.1 CDS Rahaq_4201 NC_015061.1 4586689 4587315 D PFAM: YhhN family protein; KEGG: spe:Spro_0212 YhhN family protein; hypothetical protein 4586689..4587315 Rahnella sp. Y9602 10215247 YP_004214917.1 CDS Rahaq_4202 NC_015061.1 4587428 4589782 D KEGG: spe:Spro_0209 zinc/cadmium/mercury/lead-transporting ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; heavy metal translocating P-type ATPase 4587428..4589782 Rahnella sp. Y9602 10215248 YP_004214918.1 CDS Rahaq_4203 NC_015061.1 4589801 4590061 R PFAM: SirA-like domain-containing protein; KEGG: esa:ESA_04263 sulfur transfer protein SirA; SirA-like domain-containing protein complement(4589801..4590061) Rahnella sp. Y9602 10215249 YP_004214919.1 CDS Rahaq_4204 NC_015061.1 4590300 4590971 D KEGG: spe:Spro_0204 hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165; hypothetical protein 4590300..4590971 Rahnella sp. Y9602 10215250 YP_004214920.1 CDS Rahaq_4205 NC_015061.1 4591097 4591663 D KEGG: cro:ROD_43451 lipoprotein; lipoprotein 4591097..4591663 Rahnella sp. Y9602 10215251 YP_004214921.1 CDS Rahaq_4206 NC_015061.1 4591889 4592581 D KEGG: eta:ETA_32580 hypothetical protein; hypothetical protein 4591889..4592581 Rahnella sp. Y9602 10215252 YP_004214922.1 CDS Rahaq_4207 NC_015061.1 4592587 4592772 D KEGG: kpu:KP1_2686 hypothetical protein; hypothetical protein 4592587..4592772 Rahnella sp. Y9602 10215253 YP_004214923.1 CDS Rahaq_4208 NC_015061.1 4592808 4593287 D KEGG: kva:Kvar_2562 type VI secretion system effector, Hcp1 family; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; type VI secretion system effector 4592808..4593287 Rahnella sp. Y9602 10215254 YP_004214924.1 CDS Rahaq_4209 NC_015061.1 4593562 4594914 D KEGG: ebi:EbC_02250 MFS family, sn-glycerol-3-phosphate transport protein; TIGRFAM: glycerol-3-phosphate transporter; phosphoglycerate transporter; PFAM: major facilitator superfamily MFS_1; glycerol-3-phosphate transporter 4593562..4594914 Rahnella sp. Y9602 10215255 YP_004214925.1 CDS Rahaq_4210 NC_015061.1 4594964 4596040 R KEGG: ypz:YPZ3_2128 mannitol transport ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter complement(4594964..4596040) Rahnella sp. Y9602 10215256 YP_004214926.1 CDS Rahaq_4211 NC_015061.1 4596073 4597437 R PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: ent:Ent638_2662 phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II complement(4596073..4597437) Rahnella sp. Y9602 10215257 YP_004214927.1 CDS Rahaq_4212 NC_015061.1 4597492 4598526 R KEGG: ypb:YPTS_2613 LacI family transcription regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator complement(4597492..4598526) Rahnella sp. Y9602 10215258 YP_004214928.1 CDS Rahaq_4213 NC_015061.1 4598794 4600056 D PFAM: extracellular solute-binding protein family 1; KEGG: ypb:YPTS_2612 extracellular solute-binding protein; extracellular solute-binding protein 4598794..4600056 Rahnella sp. Y9602 10215259 YP_004214929.1 CDS Rahaq_4214 NC_015061.1 4600060 4600929 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypy:YPK_1635 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4600060..4600929 Rahnella sp. Y9602 10215260 YP_004214930.1 CDS Rahaq_4215 NC_015061.1 4600926 4601807 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypb:YPTS_2610 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4600926..4601807 Rahnella sp. Y9602 10215261 YP_004214931.1 CDS Rahaq_4216 NC_015061.1 4601817 4603370 D KEGG: gym:GYMC10_0576 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; alpha amylase 4601817..4603370 Rahnella sp. Y9602 10215262 YP_004214932.1 CDS Rahaq_4217 NC_015061.1 4603351 4604418 D PFAM: glycosidase related protein; KEGG: ypb:YPTS_2609 glycosidase PH1107-related; glycosidase-like protein 4603351..4604418 Rahnella sp. Y9602 10215263 YP_004214933.1 CDS Rahaq_4218 NC_015061.1 4604415 4605329 D PFAM: protein of unknown function DUF1861; KEGG: pjd:Pjdr2_5413 protein of unknown function DUF1861; hypothetical protein 4604415..4605329 Rahnella sp. Y9602 10215264 YP_004214934.1 CDS Rahaq_4219 NC_015061.1 4605506 4607179 D PFAM: Polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: enc:ECL_04452 TPS family two-partner secretion family member CdiB; Polypeptide-transport-associated domain protein ShlB-type 4605506..4607179 Rahnella sp. Y9602 10215265 YP_004214935.1 CDS Rahaq_4220 NC_015061.1 4607192 4615768 D KEGG: kpe:KPK_4110 filamentous haemagglutinin family protein; TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein; protein of unknown function DUF638 hemagglutinin/hemolysin; filamentous hemagglutinin family outer membrane protein 4607192..4615768 Rahnella sp. Y9602 10215266 YP_004214936.1 CDS Rahaq_4221 NC_015061.1 4615768 4616028 D KEGG: epy:EpC_29120 hypothetical protein; hypothetical protein 4615768..4616028 Rahnella sp. Y9602 10215267 YP_004214937.1 CDS Rahaq_4222 NC_015061.1 4616025 4616873 D PFAM: protein of unknown function DUF638 hemagglutinin/hemolysin; KEGG: eic:NT01EI_3309 hypothetical protein; hypothetical protein 4616025..4616873 Rahnella sp. Y9602 10215268 YP_004214938.1 CDS Rahaq_4223 NC_015061.1 4616870 4617103 D KEGG: hya:HY04AAS1_0382 integral membrane sensor signal transduction histidine kinase; hypothetical protein 4616870..4617103 Rahnella sp. Y9602 10215269 YP_004214939.1 CDS Rahaq_4224 NC_015061.1 4617148 4617387 R PFAM: Domain of unknown function DUF1813 HSP20-like; KEGG: plu:plu3591 hypothetical protein; hypothetical protein complement(4617148..4617387) Rahnella sp. Y9602 10215270 YP_004214940.1 CDS Rahaq_4225 NC_015061.1 4617467 4617754 R KEGG: eca:ECA3417 phage regulatory protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(4617467..4617754) Rahnella sp. Y9602 10215271 YP_004214941.1 CDS Rahaq_4227 NC_015061.1 4619592 4619852 D KEGG: epy:EpC_29120 hypothetical protein; hypothetical protein 4619592..4619852 Rahnella sp. Y9602 10215273 YP_004214942.1 CDS Rahaq_4229 NC_015061.1 4620175 4620984 R KEGG: spe:Spro_0197 sugar phosphatase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase complement(4620175..4620984) Rahnella sp. Y9602 10215275 YP_004214943.1 CDS Rahaq_4230 NC_015061.1 4621033 4622025 R KEGG: spe:Spro_0196 lysophospholipase L2; PFAM: alpha/beta hydrolase fold; lysophospholipase complement(4621033..4622025) Rahnella sp. Y9602 10215276 YP_004214944.1 CDS Rahaq_4231 NC_015061.1 4622148 4622768 D KEGG: pwa:Pecwa_4152 homoserine/homoserine lactone efflux protein; TIGRFAM: homoserine/threonine efflux pump; PFAM: lysine exporter protein (LYSE/YGGA); homoserine/threonine efflux pump 4622148..4622768 Rahnella sp. Y9602 10215277 YP_004214945.1 CDS Rahaq_4232 NC_015061.1 4622833 4623450 R KEGG: yen:YE0205 threonine efflux system; TIGRFAM: homoserine/threonine efflux pump; PFAM: lysine exporter protein (LYSE/YGGA); homoserine/threonine efflux pump complement(4622833..4623450) Rahnella sp. Y9602 10215278 YP_004214946.1 CDS Rahaq_4233 NC_015061.1 4623488 4625320 R TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: RQC domain; DEAD/DEAH box helicase domain protein; helicase domain protein; HRDC domain protein; KEGG: yen:YE0204 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase ; helicase domain protein; HRDC domain protein; ATP-dependent DNA helicase RecQ complement(4623488..4625320) Rahnella sp. Y9602 10215279 YP_004214947.1 CDS Rahaq_4234 NC_015061.1 4625449 4626327 R KEGG: spe:Spro_0192 phospholipase A; PFAM: phospholipase A1; Phospholipase A(1) complement(4625449..4626327) Rahnella sp. Y9602 10215280 YP_004214948.1 CDS Rahaq_4235 NC_015061.1 4626406 4626549 R hypothetical protein complement(4626406..4626549) Rahnella sp. Y9602 10215281 YP_004214949.1 CDS Rahaq_4236 NC_015061.1 4626582 4627064 D PFAM: thioesterase superfamily protein; KEGG: spe:Spro_0191 hypothetical protein; thioesterase superfamily protein 4626582..4627064 Rahnella sp. Y9602 10215282 YP_004214950.1 CDS Rahaq_4237 NC_015061.1 4627113 4628027 D KEGG: esa:ESA_03741 hypothetical protein; TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; RarD protein, DMT superfamily transporter 4627113..4628027 Rahnella sp. Y9602 10215283 YP_004214951.1 CDS Rahaq_4238 NC_015061.1 4627992 4629059 R KEGG: spe:Spro_0189 ammonia monooxygenase; TIGRFAM: membrane protein AbrB duplication; PFAM: ammonia monooxygenase; AbrB family transcriptional regulator complement(4627992..4629059) Rahnella sp. Y9602 10215284 YP_004214952.1 CDS Rahaq_4239 NC_015061.1 4629066 4630016 R KEGG: spe:Spro_0188 magnesium/nickel/cobalt transporter CorA; TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; magnesium and cobalt transport protein CorA complement(4629066..4630016) Rahnella sp. Y9602 10215285 YP_004214953.1 CDS Rahaq_4240 NC_015061.1 4630436 4630912 D KEGG: ddc:Dd586_1324 hypothetical protein; hypothetical protein 4630436..4630912 Rahnella sp. Y9602 10215286 YP_004214954.1 CDS Rahaq_4241 NC_015061.1 4631055 4633217 R KEGG: spe:Spro_0186 DNA-dependent helicase II; TIGRFAM: DNA helicase II; PFAM: UvrD/REP helicase; DNA helicase II complement(4631055..4633217) Rahnella sp. Y9602 10215287 YP_004214955.1 CDS Rahaq_4242 NC_015061.1 4633314 4634030 R KEGG: dda:Dd703_0235 HAD-superfamily hydrolase, subfamily IA, variant 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase complement(4633314..4634030) Rahnella sp. Y9602 10215288 YP_004214956.1 CDS Rahaq_4243 NC_015061.1 4634030 4634941 R KEGG: yen:YE0194 site-specific tyrosine recombinase XerC; TIGRFAM: tyrosine recombinase XerC; PFAM: integrase family protein; integrase domain protein SAM domain protein; tyrosine recombinase XerC complement(4634030..4634941) Rahnella sp. Y9602 10215289 YP_004214957.1 CDS Rahaq_4244 NC_015061.1 4634938 4635642 R PFAM: protein of unknown function DUF484; KEGG: ypb:YPTS_0204 hypothetical protein; hypothetical protein complement(4634938..4635642) Rahnella sp. Y9602 10215290 YP_004214958.1 CDS Rahaq_4245 NC_015061.1 4635639 4636463 R KEGG: spe:Spro_0182 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase; diaminopimelate epimerase complement(4635639..4636463) Rahnella sp. Y9602 10215291 YP_004214959.1 CDS Rahaq_4246 NC_015061.1 4636560 4636763 R manually curated; KEGG: yen:YE0191 lipoprotein; lipoprotein complement(4636560..4636763) Rahnella sp. Y9602 10215292 YP_004214960.1 CDS Rahaq_4247 NC_015061.1 4636922 4639480 R KEGG: spe:Spro_0179 adenylate cyclase; PFAM: adenylate cyclase class-I; adenylate cyclase complement(4636922..4639480) Rahnella sp. Y9602 10215293 YP_004214961.1 CDS Rahaq_4248 NC_015061.1 4639808 4640749 D KEGG: spe:Spro_0178 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; porphobilinogen deaminase 4639808..4640749 Rahnella sp. Y9602 10215294 YP_004214962.1 CDS Rahaq_4249 NC_015061.1 4640746 4641495 D PFAM: Uroporphyrinogen III synthase HEM4; KEGG: spe:Spro_0177 uroporphyrinogen-III synthase; uroporphyrinogen III synthase HEM4 4640746..4641495 Rahnella sp. Y9602 10215295 YP_004214963.1 CDS Rahaq_4250 NC_015061.1 4641509 4642660 D KEGG: yen:YE0185 uroporphyrinogen III C-methyltransferase; PFAM: protein of unknown function DUF513 hemX; uroporphyrinogen-III C-methyltransferase 4641509..4642660 Rahnella sp. Y9602 10215296 YP_004214964.1 CDS Rahaq_4251 NC_015061.1 4642664 4643860 D KEGG: spe:Spro_0175 protoheme IX biogenesis protein; TIGRFAM: HemY protein; PFAM: HemY domain protein; HemY protein 4642664..4643860 Rahnella sp. Y9602 10215297 YP_004214965.1 CDS Rahaq_4252 NC_015061.1 4645063 4646457 R PFAM: amino acid permease-associated region; KEGG: ypb:YPTS_0192 transport protein YifK; amino acid permease complement(4645063..4646457) Rahnella sp. Y9602 10215302 YP_004214966.1 CDS Rahaq_4253 NC_015061.1 4646699 4647439 R TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; KEGG: plu:plu4651 UDP-N-acetyl-D-mannosaminuronic acid transferase; PFAM: glycosyl transferase WecB/TagA/CpsF; WecB/TagA/CpsF family glycosyl transferase complement(4646699..4647439) Rahnella sp. Y9602 10215303 YP_004214967.1 CDS Rahaq_4254 NC_015061.1 4647423 4648802 R PFAM: WzyE family protein; KEGG: spe:Spro_0171 common antigen polymerase; WzyE family protein complement(4647423..4648802) Rahnella sp. Y9602 10215304 YP_004214968.1 CDS Rahaq_4255 NC_015061.1 4648799 4649881 R PFAM: 4-alpha-L-fucosyltransferase; KEGG: spe:Spro_0170 4-alpha-L-fucosyltransferase; 4-alpha-L-fucosyltransferase complement(4648799..4649881) Rahnella sp. Y9602 10215305 YP_004214969.1 CDS Rahaq_4256 NC_015061.1 4649878 4651128 R PFAM: polysaccharide biosynthesis protein; KEGG: spe:Spro_0169 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(4649878..4651128) Rahnella sp. Y9602 10215306 YP_004214970.1 CDS Rahaq_4257 NC_015061.1 4651130 4652260 R KEGG: spe:Spro_0168 TDP-4-oxo-6-deoxy-D-glucose transaminase; TIGRFAM: TDP-4-keto-6-deoxy-D-glucose transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; TDP-4-keto-6-deoxy-D-glucose transaminase complement(4651130..4652260) Rahnella sp. Y9602 10215307 YP_004214971.1 CDS Rahaq_4258 NC_015061.1 4652265 4652999 R KEGG: xne:XNC1_0390 acyl-CoA N-acyltransferase, lipopolysaccharide biosynthesis protein; TIGRFAM: TDP-D-fucosamine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; TDP-D-fucosamine acetyltransferase complement(4652265..4652999) Rahnella sp. Y9602 10215308 YP_004214972.1 CDS Rahaq_4259 NC_015061.1 4652966 4654228 R KEGG: spe:Spro_0164 UDP-N-acetyl-D-mannosamine dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase complement(4652966..4654228) Rahnella sp. Y9602 10215309 YP_004214973.1 CDS Rahaq_4260 NC_015061.1 4654225 4655355 R PFAM: UDP-N-acetylglucosamine 2-epimerase; manually curated; KEGG: spe:Spro_0163 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase complement(4654225..4655355) Rahnella sp. Y9602 10215310 YP_004214974.1 CDS Rahaq_4261 NC_015061.1 4655352 4656404 R PFAM: lipopolysaccharide biosynthesis protein; KEGG: spe:Spro_0162 lipopolysaccharide biosynthesis protein WzzE; lipopolysaccharide biosynthesis protein complement(4655352..4656404) Rahnella sp. Y9602 10215311 YP_004214975.1 CDS Rahaq_4262 NC_015061.1 4656449 4657519 R KEGG: ypb:YPTS_0180 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; PFAM: Glycosyl transferase, family 4, conserved region; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase complement(4656449..4657519) Rahnella sp. Y9602 10215312 YP_004214976.1 CDS Rahaq_4263 NC_015061.1 4657822 4659081 R TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; Rho termination factor RNA-binding; Rho termination factor domain protein; KEGG: ebi:EbC_01950 transcription termination factor Rho; SMART: Cold shock protein; AAA ATPase; transcription termination factor Rho complement(4657822..4659081) Rahnella sp. Y9602 10215313 YP_004214977.1 CDS Rahaq_4264 NC_015061.1 4659497 4659823 R KEGG: ent:Ent638_4004 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein; thioredoxin complement(4659497..4659823) Rahnella sp. Y9602 10215314 YP_004214978.1 CDS Rahaq_4265 NC_015061.1 4659941 4661233 D KEGG: ypb:YPTS_0177 ATP-dependent RNA helicase RhlB; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase 4659941..4661233 Rahnella sp. Y9602 10215315 YP_004214979.1 CDS Rahaq_4266 NC_015061.1 4661240 4662730 D KEGG: spe:Spro_0157 guanosine pentaphosphate phosphohydrolase; PFAM: Ppx/GppA phosphatase; Ppx/GppA phosphatase 4661240..4662730 Rahnella sp. Y9602 10215316 YP_004214980.1 CDS Rahaq_4267 NC_015061.1 4662808 4664832 R KEGG: spe:Spro_0156 ATP-dependent DNA helicase Rep; TIGRFAM: ATP-dependent DNA helicase Rep; PFAM: UvrD/REP helicase; ATP-dependent DNA helicase Rep complement(4662808..4664832) Rahnella sp. Y9602 10215317 YP_004214981.1 CDS Rahaq_4268 NC_015061.1 4664921 4665289 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: ctu:Ctu_02140 peptidyl-prolyl cis-trans isomerase C; PpiC-type peptidyl-prolyl cis-trans isomerase 4664921..4665289 Rahnella sp. Y9602 10215318 YP_004214982.1 CDS Rahaq_4269 NC_015061.1 4665379 4666854 R TIGRFAM: ketol-acid reductoisomerase; KEGG: yen:YE0155 ketol-acid reductoisomerase; PFAM: acetohydroxy acid isomeroreductase; Acetohydroxy acid isomeroreductase catalytic domain-containing protein; ketol-acid reductoisomerase complement(4665379..4666854) Rahnella sp. Y9602 10215319 YP_004214983.1 CDS Rahaq_4270 NC_015061.1 4667041 4667922 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: yen:YE0154 DNA-binding transcriptional regulator IlvY; LysR family transcriptional regulator 4667041..4667922 Rahnella sp. Y9602 10215320 YP_004214984.1 CDS Rahaq_4271 NC_015061.1 4667971 4669515 R KEGG: spe:Spro_4756 threonine dehydratase; TIGRFAM: threonine dehydratase, biosynthetic; PFAM: Pyridoxal-5'-phosphate-dependent protein subunit beta; Threonine dehydratase domain-containing protein; threonine dehydratase, biosynthetic complement(4667971..4669515) Rahnella sp. Y9602 10215321 YP_004214985.1 CDS Rahaq_4272 NC_015061.1 4669521 4671371 R TIGRFAM: dihydroxy-acid dehydratase; KEGG: spe:Spro_4757 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase complement(4669521..4671371) Rahnella sp. Y9602 10215322 YP_004214986.1 CDS Rahaq_4273 NC_015061.1 4671506 4672435 R KEGG: pct:PC1_4030 branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; branched-chain amino acid aminotransferase complement(4671506..4672435) Rahnella sp. Y9602 10215323 YP_004214987.1 CDS Rahaq_4274 NC_015061.1 4672452 4672715 R KEGG: yen:YE0149 acetolactate synthase 2 regulatory subunit; acetolactate synthase 2 regulatory subunit complement(4672452..4672715) Rahnella sp. Y9602 10215324 YP_004214988.1 CDS Rahaq_4275 NC_015061.1 4672712 4674358 R KEGG: yen:YE0148 acetolactate synthase 2 catalytic subunit; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; acetolactate synthase large subunit complement(4672712..4674358) Rahnella sp. Y9602 10215325 YP_004214989.1 CDS Rahaq_4276 NC_015061.1 4674740 4675978 R PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_4761 major facilitator transporter; major facilitator superfamily protein complement(4674740..4675978) Rahnella sp. Y9602 10215326 YP_004214990.1 CDS Rahaq_4277 NC_015061.1 4676345 4677880 D TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: pct:PC1_4033 Mg chelatase, subunit ChlI; SMART: AAA ATPase; Mg chelatase subunit ChlI 4676345..4677880 Rahnella sp. Y9602 10215327 YP_004214991.1 CDS Rahaq_4278 NC_015061.1 4677906 4678244 R PFAM: protein of unknown function DUF413; KEGG: spe:Spro_4763 hypothetical protein; hypothetical protein complement(4677906..4678244) Rahnella sp. Y9602 10215328 YP_004214992.1 CDS Rahaq_4279 NC_015061.1 4678363 4679187 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: spe:Spro_4764 transcriptional regulator HdfR; LysR family transcriptional regulator 4678363..4679187 Rahnella sp. Y9602 10215329 YP_004214993.1 CDS Rahaq_4280 NC_015061.1 4679200 4680186 R PFAM: inner-membrane translocator; KEGG: spe:Spro_4765 inner membrane ABC transporter permease YjfF; inner-membrane translocator complement(4679200..4680186) Rahnella sp. Y9602 10215330 YP_004214994.1 CDS Rahaq_4281 NC_015061.1 4680186 4681184 R PFAM: inner-membrane translocator; KEGG: ypb:YPTS_0138 inner-membrane translocator; inner-membrane translocator complement(4680186..4681184) Rahnella sp. Y9602 10215331 YP_004214995.1 CDS Rahaq_4282 NC_015061.1 4681218 4682726 R KEGG: ypy:YPK_4067 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(4681218..4682726) Rahnella sp. Y9602 10215332 YP_004214996.1 CDS Rahaq_4283 NC_015061.1 4682810 4683766 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: pwa:Pecwa_4229 periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator complement(4682810..4683766) Rahnella sp. Y9602 10215333 YP_004214997.1 CDS Rahaq_4284 NC_015061.1 4684140 4684403 D PFAM: transposase IS3/IS911 family protein; KEGG: spe:Spro_0375 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 4684140..4684403 Rahnella sp. Y9602 10215334 YP_004214998.1 CDS Rahaq_4285 NC_015061.1 4684430 4685260 D PFAM: Integrase catalytic region; KEGG: enc:ECL_A124 IS3 family transposase orfB; integrase catalytic subunit 4684430..4685260 Rahnella sp. Y9602 10215335 YP_004214999.1 CDS Rahaq_4286 NC_015061.1 4691360 4692241 R TIGRFAM: glutamate racemase; KEGG: spe:Spro_4769 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; glutamate racemase complement(4691360..4692241) Rahnella sp. Y9602 10215343 YP_004215000.1 CDS Rahaq_4287 NC_015061.1 4692186 4694063 R KEGG: ypz:YPZ3_3451 vitamin B12 receptor protein; TIGRFAM: TonB-dependent vitamin B12 receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; TonB-dependent vitamin B12 receptor complement(4692186..4694063) Rahnella sp. Y9602 10215344 YP_004215001.1 CDS Rahaq_4288 NC_015061.1 4694550 4695650 D KEGG: spe:Spro_4771 tRNA (uracil-5-)-methyltransferase; TIGRFAM: tRNA (uracil-5-)-methyltransferase; PFAM: (Uracil-5)-methyltransferase; tRNA (uracil-5-)-methyltransferase 4694550..4695650 Rahnella sp. Y9602 10215345 YP_004215002.1 CDS Rahaq_4289 NC_015061.1 4695721 4696860 R PFAM: glycosyl hydrolase family 88; KEGG: pct:PC1_3379 glycosyl hydrolase family 88; glycosyl hydrolase family protein complement(4695721..4696860) Rahnella sp. Y9602 10215346 YP_004215003.1 CDS Rahaq_4290 NC_015061.1 4696885 4698471 R PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_3380 oligogalacturonide transporter; major facilitator superfamily protein complement(4696885..4698471) Rahnella sp. Y9602 10215347 YP_004215004.1 CDS Rahaq_4291 NC_015061.1 4698567 4698686 D hypothetical protein 4698567..4698686 Rahnella sp. Y9602 10215348 YP_004215005.1 CDS Rahaq_4292 NC_015061.1 4698745 4699104 R PFAM: protein of unknown function DUF1422; KEGG: pct:PC1_0190 hypothetical protein; hypothetical protein complement(4698745..4699104) Rahnella sp. Y9602 10215349 YP_004215006.1 CDS Rahaq_4293 NC_015061.1 4699079 4699759 R PFAM: regulatory protein TetR; KEGG: ebi:EbC_01760 fatty acid biosynthesis regulator; TetR family transcriptional regulator complement(4699079..4699759) Rahnella sp. Y9602 10215350 YP_004215007.1 CDS Rahaq_4294 NC_015061.1 4699972 4701372 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: yen:YE0134 soluble pyridine nucleotide transhydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4699972..4701372 Rahnella sp. Y9602 10215351 YP_004215008.1 CDS Rahaq_4295 NC_015061.1 4701355 4702278 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_4775 DNA-binding transcriptional regulator OxyR; LysR family transcriptional regulator complement(4701355..4702278) Rahnella sp. Y9602 10215352 YP_004215009.1 CDS Rahaq_4296 NC_015061.1 4702439 4703200 D KEGG: yen:YE0132 peroxiredoxin/glutaredoxin family protein; TIGRFAM: glutaredoxin-family domain protein; PFAM: Redoxin domain protein; glutaredoxin; glutaredoxin-family domain-containing protein 4702439..4703200 Rahnella sp. Y9602 10215353 YP_004215010.1 CDS Rahaq_4297 NC_015061.1 4703255 4704628 R KEGG: seh:SeHA_C4451 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; argininosuccinate lyase complement(4703255..4704628) Rahnella sp. Y9602 10215354 YP_004215011.1 CDS Rahaq_4298 NC_015061.1 4704712 4705485 R KEGG: pwa:Pecwa_4250 acetylglutamate kinase; TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; acetylglutamate kinase complement(4704712..4705485) Rahnella sp. Y9602 10215355 YP_004215012.1 CDS Rahaq_4299 NC_015061.1 4705617 4706621 R TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: ddd:Dda3937_02059 N-acetyl-gamma-glutamylphosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; N-acetyl-gamma-glutamyl-phosphate reductase complement(4705617..4706621) Rahnella sp. Y9602 10215356 YP_004215013.1 CDS Rahaq_4300 NC_015061.1 4706766 4707911 D KEGG: ebi:EbC_01680 acetylornithine deacetylase; TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein; acetylornithine deacetylase 4706766..4707911 Rahnella sp. Y9602 10215357 YP_004215014.1 CDS Rahaq_4301 NC_015061.1 4708202 4710847 D KEGG: ypb:YPTS_0113 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase, C-terminal region; phosphoenolpyruvate carboxylase 4708202..4710847 Rahnella sp. Y9602 10215358 YP_004215015.1 CDS Rahaq_4302 NC_015061.1 4710920 4711828 R TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: spe:Spro_4784 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase complement(4710920..4711828) Rahnella sp. Y9602 10215359 YP_004215016.1 CDS Rahaq_4303 NC_015061.1 4712076 4714511 R KEGG: spe:Spro_4785 bifunctional aspartate kinase II/homoserine dehydrogenase II; TIGRFAM: aspartate kinase; PFAM: homoserine dehydrogenase; aspartate/glutamate/uridylate kinase; homoserine dehydrogenase NAD-binding; aspartate kinase complement(4712076..4714511) Rahnella sp. Y9602 10215360 YP_004215017.1 CDS Rahaq_4304 NC_015061.1 4714514 4715674 R KEGG: eta:ETA_01270 cystathionine gamma-synthase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; O-succinylhomoserine (thiol)-lyase complement(4714514..4715674) Rahnella sp. Y9602 10215361 YP_004215018.1 CDS Rahaq_4305 NC_015061.1 4716005 4716322 D PFAM: methionine repressor MetJ; KEGG: yen:YE0110 transcriptional repressor protein MetJ; methionine repressor MetJ 4716005..4716322 Rahnella sp. Y9602 10215362 YP_004215019.1 CDS Rahaq_4306 NC_015061.1 4716493 4716705 R KEGG: spe:Spro_4788 50S ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; 50S ribosomal protein L31 complement(4716493..4716705) Rahnella sp. Y9602 10215363 YP_004215020.1 CDS Rahaq_4307 NC_015061.1 4716907 4719102 D TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: spe:Spro_4789 primosome assembly protein PriA; SMART: DEAD-like helicase ; helicase domain protein; primosomal protein N' 4716907..4719102 Rahnella sp. Y9602 10215364 YP_004215021.1 CDS Rahaq_4308 NC_015061.1 4719264 4720334 D KEGG: yen:YE0107 DNA-binding transcriptional regulator CytR; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator 4719264..4720334 Rahnella sp. Y9602 10215365 YP_004215022.1 CDS Rahaq_4309 NC_015061.1 4720533 4721375 D KEGG: spe:Spro_4791 cell division protein FtsN; TIGRFAM: cell division protein FtsN; PFAM: Sporulation domain-containing protein; cell division protein FtsN 4720533..4721375 Rahnella sp. Y9602 10215366 YP_004215023.1 CDS Rahaq_4310 NC_015061.1 4721440 4722021 D PFAM: 20S proteasome A and B subunits; KEGG: dze:Dd1591_0114 ATP-dependent protease peptidase subunit; 20S proteasome subunits A/B 4721440..4722021 Rahnella sp. Y9602 10215367 YP_004215024.1 CDS Rahaq_4311 NC_015061.1 4722033 4723367 D TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; KEGG: spe:Spro_4793 ATP-dependent protease ATP-binding subunit HslU; SMART: AAA ATPase; heat shock protein HslVU, ATPase subunit HslU 4722033..4723367 Rahnella sp. Y9602 10215368 YP_004215025.1 CDS Rahaq_4312 NC_015061.1 4723462 4724388 D KEGG: ypb:YPTS_0098 1,4-dihydroxy-2-naphthoate octaprenyltransferase; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 4723462..4724388 Rahnella sp. Y9602 10215369 YP_004215026.1 CDS Rahaq_4313 NC_015061.1 4724509 4724994 D KEGG: ebi:EbC_01530 regulator of ribonuclease activity A; TIGRFAM: regulator of ribonuclease activity A; PFAM: Dimethylmenaquinone methyltransferase; ribonuclease activity A regulator 4724509..4724994 Rahnella sp. Y9602 10215370 YP_004215027.1 CDS Rahaq_4314 NC_015061.1 4725059 4725298 R PFAM: protein of unknown function DUF904; KEGG: spe:Spro_4796 hypothetical protein; hypothetical protein complement(4725059..4725298) Rahnella sp. Y9602 10215371 YP_004215028.1 CDS Rahaq_4315 NC_015061.1 4725876 4726724 D KEGG: ypb:YPTS_0091 MIP family channel protein; TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; MIP family channel protein 4725876..4726724 Rahnella sp. Y9602 10215372 YP_004215029.1 CDS Rahaq_4316 NC_015061.1 4726770 4728293 D KEGG: spe:Spro_4798 glycerol kinase; TIGRFAM: glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like; glycerol kinase 4726770..4728293 Rahnella sp. Y9602 10215373 YP_004215030.1 CDS Rahaq_4317 NC_015061.1 4728437 4729447 D TIGRFAM: fructose-1,6-bisphosphatase, class II; KEGG: spe:Spro_4799 fructose 1,6-bisphosphatase II; PFAM: GlpX family protein; fructose-1,6-bisphosphatase 4728437..4729447 Rahnella sp. Y9602 10215374 YP_004215031.1 CDS Rahaq_4318 NC_015061.1 4729504 4730697 R PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_4800 multidrug resistance protein D; major facilitator superfamily protein complement(4729504..4730697) Rahnella sp. Y9602 10215375 YP_004215032.1 CDS Rahaq_4319 NC_015061.1 4731021 4731767 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: ebi:EbC_01470 ferredoxin-NADP reductase; oxidoreductase FAD/NAD(P)-binding domain-containing protein 4731021..4731767 Rahnella sp. Y9602 10215376 YP_004215033.1 CDS Rahaq_4320 NC_015061.1 4731784 4732206 R PFAM: protein of unknown function DUF805; KEGG: ypi:YpsIP31758_0098 hypothetical protein; hypothetical protein complement(4731784..4732206) Rahnella sp. Y9602 10215377 YP_004215034.1 CDS Rahaq_4321 NC_015061.1 4732365 4732973 D PFAM: protein of unknown function DUF1454; KEGG: spe:Spro_4804 hypothetical protein; hypothetical protein 4732365..4732973 Rahnella sp. Y9602 10215378 YP_004215035.1 CDS Rahaq_4322 NC_015061.1 4733101 4733868 D TIGRFAM: triosephosphate isomerase; KEGG: yen:YE0093 triosephosphate isomerase; PFAM: triosephosphate isomerase; triosephosphate isomerase 4733101..4733868 Rahnella sp. Y9602 10215379 YP_004215036.1 CDS Rahaq_4323 NC_015061.1 4733936 4734925 R KEGG: ypb:YPTS_0078 sulfate transporter subunit; TIGRFAM: sulfate ABC transporter periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; sulfate ABC transporter substrate-binding protein complement(4733936..4734925) Rahnella sp. Y9602 10215380 YP_004215037.1 CDS Rahaq_4324 NC_015061.1 4735110 4736096 R KEGG: ypi:YpsIP31758_0089 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase; 6-phosphofructokinase complement(4735110..4736096) Rahnella sp. Y9602 10215381 YP_004215038.1 CDS Rahaq_4325 NC_015061.1 4736444 4736953 R KEGG: yen:YE0087 periplasmic stress adaptor protein CpxP; periplasmic stress adaptor protein CpxP complement(4736444..4736953) Rahnella sp. Y9602 10215382 YP_004215039.1 CDS Rahaq_4326 NC_015061.1 4737106 4737807 D KEGG: eta:ETA_00950 DNA-binding transcriptional regulator CpxR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator 4737106..4737807 Rahnella sp. Y9602 10215383 YP_004215040.1 CDS Rahaq_4327 NC_015061.1 4737804 4739174 D KEGG: yen:YE0085 two-component sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase 4737804..4739174 Rahnella sp. Y9602 10215384 YP_004215041.1 CDS Rahaq_4328 NC_015061.1 4739212 4739685 D KEGG: ypy:YPK_4135 RNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); TrmH family RNA methyltransferase 4739212..4739685 Rahnella sp. Y9602 10215385 YP_004215042.1 CDS Rahaq_4329 NC_015061.1 4739738 4740559 R TIGRFAM: serine O-acetyltransferase; KEGG: yen:YE0082 serine acetyltransferase; serine O-acetyltransferase complement(4739738..4740559) Rahnella sp. Y9602 10215386 YP_004215043.1 CDS Rahaq_4330 NC_015061.1 4740647 4741666 R PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: spe:Spro_4815 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein complement(4740647..4741666) Rahnella sp. Y9602 10215387 YP_004215044.1 CDS Rahaq_4331 NC_015061.1 4741666 4742136 R KEGG: yen:YE0080 preprotein translocase subunit SecB; TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB; protein-export protein SecB complement(4741666..4742136) Rahnella sp. Y9602 10215388 YP_004215045.1 CDS Rahaq_4332 NC_015061.1 4742201 4742452 R KEGG: yen:YE0079 glutaredoxin 3; TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; glutaredoxin 3 complement(4742201..4742452) Rahnella sp. Y9602 10215389 YP_004215046.1 CDS Rahaq_4333 NC_015061.1 4742506 4742937 R KEGG: yen:YE0078 hypothetical protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; rhodanese domain-containing protein complement(4742506..4742937) Rahnella sp. Y9602 10215390 YP_004215047.1 CDS Rahaq_4334 NC_015061.1 4743242 4744786 D TIGRFAM: phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; KEGG: yen:YE0077 phosphoglyceromutase; PFAM: BPG-independent PGAM domain protein; metalloenzyme domain protein; phosphoglycerate mutase 4743242..4744786 Rahnella sp. Y9602 10215391 YP_004215048.1 CDS Rahaq_4335 NC_015061.1 4744896 4746224 D PFAM: Peptidase M23; KEGG: spe:Spro_4820 hypothetical protein; peptidase M23 4744896..4746224 Rahnella sp. Y9602 10215392 YP_004215049.1 CDS Rahaq_4336 NC_015061.1 4746227 4747156 D KEGG: ent:Ent638_0121 protein of unknown function DUF610, YibQ; manually curated; PFAM: protein of unknown function DUF610 YibQ; hypothetical protein 4746227..4747156 Rahnella sp. Y9602 10215393 YP_004215050.1 CDS Rahaq_4337 NC_015061.1 4747338 4748561 D PFAM: glycosyl transferase group 1; KEGG: ebi:EbC_00820 glycosyl transferase, group 1; group 1 glycosyl transferase 4747338..4748561 Rahnella sp. Y9602 10215394 YP_004215051.1 CDS Rahaq_4338 NC_015061.1 4748564 4749493 D KEGG: ebi:EbC_00810 hypothetical protein; hypothetical protein 4748564..4749493 Rahnella sp. Y9602 10215395 YP_004215052.1 CDS Rahaq_4339 NC_015061.1 4749561 4750583 R KEGG: ypb:YPTS_0059 L-threonine 3-dehydrogenase; TIGRFAM: L-threonine 3-dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; L-threonine 3-dehydrogenase complement(4749561..4750583) Rahnella sp. Y9602 10215396 YP_004215053.1 CDS Rahaq_4340 NC_015061.1 4750593 4751789 R TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase; KEGG: spe:Spro_4824 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: aminotransferase class I and II; 2-amino-3-ketobutyrate CoA ligase complement(4750593..4751789) Rahnella sp. Y9602 10215397 YP_004215054.1 CDS Rahaq_4341 NC_015061.1 4752032 4752964 D KEGG: pct:PC1_4088 ADP-L-glycero-D-mannoheptose-6-epimerase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; ADP-L-glycero-D-manno-heptose-6-epimerase 4752032..4752964 Rahnella sp. Y9602 10215398 YP_004215055.1 CDS Rahaq_4342 NC_015061.1 4752995 4754044 D KEGG: ddd:Dda3937_02040 ADP-heptose:LPS heptosyltransferase II; TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; lipopolysaccharide heptosyltransferase II 4752995..4754044 Rahnella sp. Y9602 10215399 YP_004215056.1 CDS Rahaq_4343 NC_015061.1 4754044 4755033 D KEGG: spe:Spro_4827 ADP-heptose:LPS heptosyl transferase I; TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; lipopolysaccharide heptosyltransferase I 4754044..4755033 Rahnella sp. Y9602 10215400 YP_004215057.1 CDS Rahaq_4344 NC_015061.1 4755030 4756127 D PFAM: glycosyl transferase family 9; KEGG: ebi:EbC_00710 glycosyl transferase, family 9; glycosyl transferase family protein 4755030..4756127 Rahnella sp. Y9602 10215401 YP_004215058.1 CDS Rahaq_4345 NC_015061.1 4756120 4757124 D KEGG: eca:ECA0157 lipopolysaccharide 1,2-glucosyltransferase; PFAM: glycosyl transferase family 8; Lipopolysaccharide glucosyltransferase I 4756120..4757124 Rahnella sp. Y9602 10215402 YP_004215059.1 CDS Rahaq_4346 NC_015061.1 4757121 4758407 D PFAM: O-antigen polymerase; KEGG: ebi:EbC_pEb10200130 lipid A core, surface polymer ligase WaaL; O-antigen polymerase 4757121..4758407 Rahnella sp. Y9602 10215403 YP_004215060.1 CDS Rahaq_4347 NC_015061.1 4758477 4759484 D PFAM: glycosyl transferase family 2; KEGG: ebi:EbC_00700 glycosyl transferase family 2; family 2 glycosyl transferase 4758477..4759484 Rahnella sp. Y9602 10215404 YP_004215061.1 CDS Rahaq_4348 NC_015061.1 4759645 4760727 D manually curated; TIGRFAM: lipopolysaccharide heptosyltransferase III; KEGG: pam:PANA_3896 RfaQ; PFAM: glycosyl transferase family 9; lipopolysaccharide heptosyltransferase III 4759645..4760727 Rahnella sp. Y9602 10215405 YP_004215062.1 CDS Rahaq_4349 NC_015061.1 4760720 4761865 D PFAM: glycosyl transferase group 1; KEGG: ebi:EbC_00680 lipopolysaccharide glycosyltransferase; group 1 glycosyl transferase 4760720..4761865 Rahnella sp. Y9602 10215406 YP_004215063.1 CDS Rahaq_4350 NC_015061.1 4761986 4763260 D PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; glycosyl transferase group 1; KEGG: yen:YE0069 3-deoxy-D-manno-octulosonic-acid transferase; three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein 4761986..4763260 Rahnella sp. Y9602 10215407 YP_004215064.1 CDS Rahaq_4351 NC_015061.1 4763260 4764027 D PFAM: glycosyl transferase family 2; KEGG: yen:YE0068 lipopolysaccharide core biosynthesis glycosyl transferase; family 2 glycosyl transferase 4763260..4764027 Rahnella sp. Y9602 10215408 YP_004215065.1 CDS Rahaq_4352 NC_015061.1 4764034 4764516 D TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: spe:Spro_4838 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase; pantetheine-phosphate adenylyltransferase 4764034..4764516 Rahnella sp. Y9602 10215409 YP_004215066.1 CDS Rahaq_4353 NC_015061.1 4764525 4765334 R TIGRFAM: formamidopyrimidine-DNA glycosylase; KEGG: spe:Spro_4839 formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding; formamidopyrimidine-DNA glycosylase complement(4764525..4765334) Rahnella sp. Y9602 10215410 YP_004215067.1 CDS Rahaq_4354 NC_015061.1 4765475 4765642 R KEGG: spe:Spro_4840 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; 50S ribosomal protein L33 complement(4765475..4765642) Rahnella sp. Y9602 10215411 YP_004215068.1 CDS Rahaq_4355 NC_015061.1 4765654 4765890 R KEGG: spe:Spro_4841 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; 50S ribosomal protein L28 complement(4765654..4765890) Rahnella sp. Y9602 10215412 YP_004215069.1 CDS Rahaq_4356 NC_015061.1 4766157 4766837 R KEGG: spe:Spro_4842 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; DNA repair protein RadC complement(4766157..4766837) Rahnella sp. Y9602 10215413 YP_004215070.1 CDS Rahaq_4357 NC_015061.1 4767022 4768239 D TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; KEGG: spe:Spro_4843 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 4767022..4768239 Rahnella sp. Y9602 10215414 YP_004215071.1 CDS Rahaq_4358 NC_015061.1 4768217 4768675 D TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; KEGG: spe:Spro_4844 deoxyuridine 5'-triphosphate nucleotidohydrolase; PFAM: deoxyUTP pyrophosphatase; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 4768217..4768675 Rahnella sp. Y9602 10215415 YP_004215072.1 CDS Rahaq_4359 NC_015061.1 4768847 4769443 D PFAM: regulatory protein TetR; KEGG: spe:Spro_4845 nucleoid occlusion protein; TetR family transcriptional regulator 4768847..4769443 Rahnella sp. Y9602 10215416 YP_004215073.1 CDS Rahaq_4360 NC_015061.1 4769497 4770033 R KEGG: ypb:YPTS_1106 hypothetical protein; hypothetical protein complement(4769497..4770033) Rahnella sp. Y9602 10215417 YP_004215074.1 CDS Rahaq_4361 NC_015061.1 4770020 4772227 R PFAM: Protein of unknown function DUF2157, membrane; KEGG: ypb:YPTS_1107 hypothetical protein; hypothetical protein complement(4770020..4772227) Rahnella sp. Y9602 10215418 YP_004215075.1 CDS Rahaq_4362 NC_015061.1 4772259 4772900 R TIGRFAM: orotate phosphoribosyltransferase; KEGG: spe:Spro_4846 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; orotate phosphoribosyltransferase complement(4772259..4772900) Rahnella sp. Y9602 10215419 YP_004215076.1 CDS Rahaq_4363 NC_015061.1 4772984 4773700 R TIGRFAM: ribonuclease PH; KEGG: spe:Spro_4847 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; ribonuclease PH complement(4772984..4773700) Rahnella sp. Y9602 10215420 YP_004215077.1 CDS Rahaq_4364 NC_015061.1 4773949 4774812 D PFAM: YicC-like domain-containing protein; domain of unknown function DUF1732; KEGG: spe:Spro_4848 hypothetical protein; hypothetical protein 4773949..4774812 Rahnella sp. Y9602 10215421 YP_004215078.1 CDS Rahaq_4365 NC_015061.1 4774892 4776166 R KEGG: yen:YE1576 3-oxoacyl-(acyl carrier protein) synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; 3-oxoacyl-ACP synthase complement(4774892..4776166) Rahnella sp. Y9602 10215422 YP_004215079.1 CDS Rahaq_4366 NC_015061.1 4776312 4776932 R PFAM: regulatory protein TetR; KEGG: ppu:PP_3300 TetR family transcriptional regulator; TetR family transcriptional regulator complement(4776312..4776932) Rahnella sp. Y9602 10215423 YP_004215080.1 CDS Rahaq_4367 NC_015061.1 4777276 4777893 D PFAM: Uncharacterised protein family UPF0126; KEGG: spe:Spro_4863 hypothetical protein; hypothetical protein 4777276..4777893 Rahnella sp. Y9602 10215424 YP_004215081.1 CDS Rahaq_4368 NC_015061.1 4777914 4779611 R PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; KEGG: ypb:YPTS_0039 NAD-dependent DNA ligase LigB; SMART: NAD-dependent DNA ligase ; Helix-hairpin-helix DNA-binding class 1; DNA ligase (NAD(+)) complement(4777914..4779611) Rahnella sp. Y9602 10215425 YP_004215082.1 CDS Rahaq_4369 NC_015061.1 4779890 4780513 D SMART: guanylate kinase/L-type calcium channel region; TIGRFAM: guanylate kinase; KEGG: cko:CKO_05105 guanylate kinase; PFAM: guanylate kinase; guanylate kinase 4779890..4780513 Rahnella sp. Y9602 10215426 YP_004215083.1 CDS Rahaq_4370 NC_015061.1 4780568 4780843 D KEGG: ent:Ent638_0090 DNA-directed RNA polymerase, omega subunit; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; DNA-directed RNA polymerase subunit omega 4780568..4780843 Rahnella sp. Y9602 10215427 YP_004215084.1 CDS Rahaq_4371 NC_015061.1 4780863 4782971 D SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: RelA/SpoT family protein; KEGG: yen:YE0045 bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase; PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain-containing protein; amino acid-binding ACT domain protein; (p)ppGpp synthetase I SpoT/RelA 4780863..4782971 Rahnella sp. Y9602 10215428 YP_004215085.1 CDS Rahaq_4372 NC_015061.1 4782977 4783675 D KEGG: spe:Spro_4870 tRNA guanosine-2'-O-methyltransferase; PFAM: tRNA/rRNA methyltransferase (SpoU); tRNA guanosine-2'-O-methyltransferase 4782977..4783675 Rahnella sp. Y9602 10215429 YP_004215086.1 CDS Rahaq_4373 NC_015061.1 4783672 4785753 D TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; KEGG: spe:Spro_4871 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase domain protein; ATP-dependent DNA helicase RecG 4783672..4785753 Rahnella sp. Y9602 10215430 YP_004215087.1 CDS Rahaq_4374 NC_015061.1 4785985 4787310 D TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; KEGG: spe:Spro_4223 PTS system lactose/cellobiose family transporter subunit IIC; PFAM: phosphotransferase system EIIC; PTS system lactose/cellobiose family transporter subunit IIC 4785985..4787310 Rahnella sp. Y9602 10215431 YP_004215088.1 CDS Rahaq_4375 NC_015061.1 4787365 4788576 R KEGG: yen:YE0042 sodium/glutamate symport carrier protein; TIGRFAM: sodium/glutamate symporter; PFAM: sodium/glutamate symporter; sodium/glutamate symporter complement(4787365..4788576) Rahnella sp. Y9602 10215432 YP_004215089.1 CDS Rahaq_4376 NC_015061.1 4788815 4790206 D KEGG: dze:Dd1591_4150 uracil-xanthine permease; TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; uracil-xanthine permease 4788815..4790206 Rahnella sp. Y9602 10215433 YP_004215090.1 CDS Rahaq_4377 NC_015061.1 4790360 4792054 D PFAM: AsmA family protein; KEGG: spe:Spro_4874 AsmA family protein; AsmA family protein 4790360..4792054 Rahnella sp. Y9602 10215434 YP_004215091.1 CDS Rahaq_4378 NC_015061.1 4792122 4793054 R KEGG: cko:CKO_03124 hypothetical protein; TIGRFAM: thioesterase domain protein; PFAM: Thioesterase ; GCN5-related N-acetyltransferase; thioesterase domain-containing protein complement(4792122..4793054) Rahnella sp. Y9602 10215435 YP_004215092.1 CDS Rahaq_4379 NC_015061.1 4793088 4793525 R KEGG: spe:Spro_4877 D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; D-tyrosyl-tRNA(Tyr) deacylase complement(4793088..4793525) Rahnella sp. Y9602 10215436 YP_004215093.1 CDS Rahaq_4380 NC_015061.1 4793544 4794413 R KEGG: spe:Spro_4878 ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; ribonuclease BN complement(4793544..4794413) Rahnella sp. Y9602 10215437 YP_004215094.1 CDS Rahaq_4381 NC_015061.1 4794425 4795012 R KEGG: plu:plu0241 phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase complement(4794425..4795012) Rahnella sp. Y9602 10215438 YP_004215095.1 CDS Rahaq_4382 NC_015061.1 4795177 4797000 R KEGG: spe:Spro_4880 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; GTP-binding protein TypA complement(4795177..4797000) Rahnella sp. Y9602 10215439 YP_004215096.1 CDS Rahaq_4383 NC_015061.1 4797472 4798881 D KEGG: yen:YE0027 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; glutamine synthetase, type I 4797472..4798881 Rahnella sp. Y9602 10215440 YP_004215097.1 CDS Rahaq_4384 NC_015061.1 4799134 4800183 D KEGG: yen:YE0026 nitrogen regulation protein NR(II); PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; signal transduction histidine kinase, nitrogen specific, NtrB 4799134..4800183 Rahnella sp. Y9602 10215441 YP_004215098.1 CDS Rahaq_4385 NC_015061.1 4800191 4801603 D TIGRFAM: nitrogen regulation protein NR(I); PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; KEGG: spe:Spro_4883 nitrogen regulation protein NR(I); SMART: response regulator receiver; AAA ATPase; Fis family transcriptional regulator 4800191..4801603 Rahnella sp. Y9602 10215442 YP_004215099.1 CDS Rahaq_4386 NC_015061.1 4801668 4803041 R TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; KEGG: spe:Spro_4884 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase complement(4801668..4803041) Rahnella sp. Y9602 10215443 YP_004215100.1 CDS Rahaq_4387 NC_015061.1 4803229 4803780 R PFAM: protein of unknown function DUF414; KEGG: yen:YE0023 hypothetical protein; hypothetical protein complement(4803229..4803780) Rahnella sp. Y9602 10215444 YP_004215101.1 CDS Rahaq_4388 NC_015061.1 4804360 4805010 D KEGG: spe:Spro_4886 ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein HSR1-related; ribosome biogenesis GTP-binding protein YsxC 4804360..4805010 Rahnella sp. Y9602 10215445 YP_004215102.1 CDS Rahaq_4389 NC_015061.1 4805361 4808165 R TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; KEGG: spe:Spro_4887 DNA polymerase I; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; 3'-5' exonuclease; DNA-directed DNA polymerase; DNA polymerase I complement(4805361..4808165) Rahnella sp. Y9602 10215446 YP_004215103.1 CDS Rahaq_4390 NC_015061.1 4808553 4809176 R PFAM: DSBA oxidoreductase; KEGG: spe:Spro_4889 periplasmic protein disulfide isomerase I; DSBA oxidoreductase complement(4808553..4809176) Rahnella sp. Y9602 10215447 YP_004215104.1 CDS Rahaq_4391 NC_015061.1 4809222 4810208 R PFAM: aminoglycoside phosphotransferase; KEGG: spe:Spro_4890 serine/threonine protein kinase; aminoglycoside phosphotransferase complement(4809222..4810208) Rahnella sp. Y9602 10215448 YP_004215105.1 CDS Rahaq_4392 NC_015061.1 4810301 4810570 R PFAM: protein of unknown function DUF1040; KEGG: spe:Spro_4891 hypothetical protein; hypothetical protein complement(4810301..4810570) Rahnella sp. Y9602 10215449 YP_004215106.1 CDS Rahaq_4393 NC_015061.1 4810724 4811311 D TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: dze:Dd1591_4168 molybdopterin-guanine dinucleotide biosynthesis protein MobA; molybdopterin-guanine dinucleotide biosynthesis protein MobA 4810724..4811311 Rahnella sp. Y9602 10215450 YP_004215107.1 CDS Rahaq_4394 NC_015061.1 4811308 4811841 D TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; KEGG: spe:Spro_4893 molybdopterin-guanine dinucleotide biosynthesis protein B; molybdopterin-guanine dinucleotide biosynthesis protein MobB 4811308..4811841 Rahnella sp. Y9602 10215451 YP_004215108.1 CDS Rahaq_4395 NC_015061.1 4817551 4818240 D KEGG: spe:Spro_4894 GntR domain-containing protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 4817551..4818240 Rahnella sp. Y9602 10215456 YP_004215109.1 CDS Rahaq_4396 NC_015061.1 4818223 4819233 R KEGG: spe:Spro_4896 transcriptional repressor RbsR; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator complement(4818223..4819233) Rahnella sp. Y9602 10215457 YP_004215110.1 CDS Rahaq_4397 NC_015061.1 4819234 4820163 R KEGG: spe:Spro_4897 ribokinase; TIGRFAM: ribokinase; PFAM: PfkB domain protein; ribokinase complement(4819234..4820163) Rahnella sp. Y9602 10215458 YP_004215111.1 CDS Rahaq_4398 NC_015061.1 4820231 4821121 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE0011 D-ribose transporter subunit RbsB; LacI family transcriptional regulator complement(4820231..4821121) Rahnella sp. Y9602 10215459 YP_004215112.1 CDS Rahaq_4399 NC_015061.1 4821145 4822116 R PFAM: inner-membrane translocator; KEGG: yen:YE0010 ribose ABC transporter permease protein; inner-membrane translocator complement(4821145..4822116) Rahnella sp. Y9602 10215460 YP_004215113.1 CDS Rahaq_4400 NC_015061.1 4822123 4823628 R KEGG: spe:Spro_4900 D-ribose transporter ATP binding protein; PFAM: ABC transporter related; Mastoparan; SMART: AAA ATPase; ABC transporter complement(4822123..4823628) Rahnella sp. Y9602 10215461 YP_004215114.1 CDS Rahaq_4401 NC_015061.1 4823636 4824055 R PFAM: RbsD or FucU transport; KEGG: spe:Spro_4901 D-ribose pyranase; transporter complement(4823636..4824055) Rahnella sp. Y9602 10215462 YP_004215115.1 CDS Rahaq_4402 NC_015061.1 4824271 4826139 R KEGG: spe:Spro_4902 potassium transport protein Kup; TIGRFAM: potassium uptake protein; PFAM: K potassium transporter; potassium uptake protein complement(4824271..4826139) Rahnella sp. Y9602 10215463 YP_004215116.1 CDS Rahaq_4403 NC_015061.1 4826407 4827915 D KEGG: ypb:YPTS_4166 regulatory ATPase RavA; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATPase AAA 4826407..4827915 Rahnella sp. Y9602 10215464 YP_004215117.1 CDS Rahaq_4404 NC_015061.1 4827918 4829387 D SMART: von Willebrand factor type A; KEGG: yen:YE0005 hypothetical protein; von Willebrand factor A 4827918..4829387 Rahnella sp. Y9602 10215465 YP_004215118.1 CDS Rahaq_4405 NC_015061.1 4829408 4829869 D KEGG: spe:Spro_4906 DNA-binding transcriptional regulator AsnC; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 4829408..4829869 Rahnella sp. Y9602 10215466 YP_004215119.1 CDS Rahaq_4406 NC_015061.1 4829958 4830401 D PFAM: flavodoxin/nitric oxide synthase; KEGG: ypb:YPTS_4170 flavodoxin; flavodoxin/nitric oxide synthase 4829958..4830401 Rahnella sp. Y9602 10215467 YP_004215120.1 CDS Rahaq_4407 NC_015061.1 4830781 4832670 D KEGG: spe:Spro_4908 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A; glucose inhibited division protein A 4830781..4832670 Rahnella sp. Y9602 10215468 YP_004215121.1 CDS Rahaq_4408 NC_015061.1 4832801 4833421 D KEGG: yen:YE4214 16S rRNA methyltransferase GidB; TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; methyltransferase GidB 4832801..4833421 Rahnella sp. Y9602 10215469 YP_004215122.1 CDS Rahaq_4409 NC_015061.1 4834071 4834469 D PFAM: ATP synthase I chain; KEGG: spe:Spro_0001 F0F1 ATP synthase subunit I; ATP synthase I chain 4834071..4834469 Rahnella sp. Y9602 10215470 YP_004215123.1 CDS Rahaq_4410 NC_015061.1 4834492 4835274 D KEGG: dda:Dd703_3987 ATP synthase F0 A subunit; TIGRFAM: ATP synthase F0 A subunit; PFAM: H+transporting two-sector ATPase A subunit; ATP synthase F0 A subunit 4834492..4835274 Rahnella sp. Y9602 10215471 YP_004215124.1 CDS Rahaq_4411 NC_015061.1 4835324 4835563 D KEGG: dze:Dd1591_4189 F0F1 ATP synthase subunit C; TIGRFAM: ATP synthase F0 C subunit; PFAM: H+transporting two-sector ATPase C subunit; ATP synthase F0 C subunit 4835324..4835563 Rahnella sp. Y9602 10215472 YP_004215125.1 CDS Rahaq_4412 NC_015061.1 4835629 4836099 D KEGG: etr:ETAE_3529 F0F1-type ATP synthase, subunit B; TIGRFAM: ATP synthase F0 B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; ATP synthase F0 subunit B 4835629..4836099 Rahnella sp. Y9602 10215473 YP_004215126.1 CDS Rahaq_4413 NC_015061.1 4836114 4836647 D KEGG: yen:YE4209 F0F1 ATP synthase subunit delta; TIGRFAM: ATP synthase F1 subunit delta; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; ATP synthase F1 subunit delta 4836114..4836647 Rahnella sp. Y9602 10215474 YP_004215127.1 CDS Rahaq_4414 NC_015061.1 4836660 4838201 D KEGG: pwa:Pecwa_4545 F0F1 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1 subunit alpha; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; H+transporting two-sector ATPase alpha/subunit beta domain protein; ATP synthase F1 subunit alpha 4836660..4838201 Rahnella sp. Y9602 10215475 YP_004215128.1 CDS Rahaq_4415 NC_015061.1 4838273 4839136 D KEGG: spe:Spro_0007 F0F1 ATP synthase subunit gamma; TIGRFAM: ATP synthase F1 subunit gamma; PFAM: H+transporting two-sector ATPase subunit gamma; ATP synthase F1 subunit gamma 4838273..4839136 Rahnella sp. Y9602 10215476 YP_004215129.1 CDS Rahaq_4416 NC_015061.1 4839169 4840551 D TIGRFAM: ATP synthase F1 subunit beta; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; H+transporting two-sector ATPase alpha/subunit beta domain protein; KEGG: spe:Spro_0008 F0F1 ATP synthase subunit beta; SMART: AAA ATPase; ATP synthase F1 subunit beta 4839169..4840551 Rahnella sp. Y9602 10215477 YP_004215130.1 CDS Rahaq_4417 NC_015061.1 4840579 4841001 D KEGG: ddd:Dda3937_00144 F1 sector of membrane-bound ATP synthase, subunit epsilon; TIGRFAM: ATP synthase F1 subunit epsilon; PFAM: ATPase, F1 complex, delta/subunit epsilon-like; ATP synthase F1 subunit epsilon 4840579..4841001 Rahnella sp. Y9602 10215478 YP_004215131.1 CDS Rahaq_4418 NC_015061.1 4841273 4842643 D TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; KEGG: enc:ECL_05151 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; UDP-N-acetylglucosamine pyrophosphorylase 4841273..4842643 Rahnella sp. Y9602 10215479 YP_004215132.1 CDS Rahaq_4419 NC_015061.1 4842776 4844605 D KEGG: spe:Spro_0011 glucosamine--fructose-6-phosphate aminotransferase; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); glucosamine/fructose-6-phosphate aminotransferase 4842776..4844605 Rahnella sp. Y9602 10215480 YP_004215133.1 CDS Rahaq_4420 NC_015061.1 4844783 4845655 D KEGG: pam:PANA_4213 RluF; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; pseudouridine synthase 4844783..4845655 Rahnella sp. Y9602 10215481 YP_004215134.1 CDS Rahaq_4421 NC_015061.1 4845872 4846912 D KEGG: spe:Spro_0012 phosphate ABC transporter periplasmic substrate-binding protein PstS; TIGRFAM: phosphate ABC transporter periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; phosphate ABC transporter substrate-binding protein 4845872..4846912 Rahnella sp. Y9602 10215482 YP_004215135.1 CDS Rahaq_4422 NC_015061.1 4847007 4847963 D KEGG: spe:Spro_0013 phosphate transporter permease subunit PstC; TIGRFAM: phosphate ABC transporter inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 4847007..4847963 Rahnella sp. Y9602 10215483 YP_004215136.1 CDS Rahaq_4423 NC_015061.1 4847965 4848852 D KEGG: yen:YE4199 phosphate transporter permease subunit PtsA; TIGRFAM: phosphate ABC transporter inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 4847965..4848852 Rahnella sp. Y9602 10215484 YP_004215137.1 CDS Rahaq_4424 NC_015061.1 4848945 4849712 D TIGRFAM: phosphate ABC transporter ATPase subunit; PFAM: ABC transporter related; KEGG: ypb:YPTS_4189 phosphate transporter ATP-binding protein; SMART: AAA ATPase; phosphate ABC transporter ATPase 4848945..4849712 Rahnella sp. Y9602 10215485 YP_004215138.1 CDS Rahaq_4425 NC_015061.1 4849723 4850454 D KEGG: spe:Spro_0016 transcriptional regulator PhoU; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; phosphate uptake regulator PhoU 4849723..4850454 Rahnella sp. Y9602 10215486 YP_004215139.1 CDS Rahaq_4426 NC_015061.1 4850539 4851231 R PFAM: regulatory protein TetR; KEGG: spe:Spro_2513 TetR family transcriptional regulator; TetR family transcriptional regulator complement(4850539..4851231) Rahnella sp. Y9602 10215487 YP_004215140.1 CDS Rahaq_4427 NC_015061.1 4851342 4852172 D PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: kva:Kvar_2145 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein TIM barrel 4851342..4852172 Rahnella sp. Y9602 10215488 YP_004215141.1 CDS Rahaq_4428 NC_015061.1 4852162 4852827 R KEGG: spe:Spro_0020 6-phosphogluconate phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase complement(4852162..4852827) Rahnella sp. Y9602 10215489 YP_004215142.1 CDS Rahaq_4429 NC_015061.1 4852980 4854317 D PFAM: Xanthine/uracil/vitamin C permease; KEGG: spe:Spro_0021 xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease 4852980..4854317 Rahnella sp. Y9602 10215490 YP_004215143.1 CDS Rahaq_4430 NC_015061.1 4854392 4854961 R PFAM: NADPH-dependent FMN reductase; KEGG: spe:Spro_0023 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase complement(4854392..4854961) Rahnella sp. Y9602 10215491 YP_004215144.1 CDS Rahaq_4431 NC_015061.1 4855053 4855778 R KEGG: spe:Spro_0024 hypothetical protein; hypothetical protein complement(4855053..4855778) Rahnella sp. Y9602 10215492 YP_004215145.1 CDS Rahaq_4432 NC_015061.1 4856102 4857997 D KEGG: yen:YE4183 methyl-accepting chemotaxis receptor protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4856102..4857997 Rahnella sp. Y9602 10215493 YP_004215146.1 CDS Rahaq_4433 NC_015061.1 4858073 4858960 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rsl:RPSI07_0113 transcription regulator protein, LysR family (AaeR); LysR family transcriptional regulator complement(4858073..4858960) Rahnella sp. Y9602 10215494 YP_004215147.1 CDS Rahaq_4434 NC_015061.1 4858986 4859660 D PFAM: dTDP-4-dehydrorhamnose reductase; KEGG: kva:Kvar_0679 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 4858986..4859660 Rahnella sp. Y9602 10215495 YP_004215148.1 CDS Rahaq_4435 NC_015061.1 4859732 4861096 R KEGG: spe:Spro_0027 tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related; tRNA modification GTPase TrmE complement(4859732..4861096) Rahnella sp. Y9602 10215496 YP_004215149.1 CDS Rahaq_4436 NC_015061.1 4861209 4862843 R KEGG: spe:Spro_0028 inner membrane protein translocase component YidC; TIGRFAM: membrane protein insertase, YidC/Oxa1 family domain containing; membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein; YidC/Oxa1 family membrane protein insertase complement(4861209..4862843) Rahnella sp. Y9602 10215497 YP_004215150.1 CDS Rahaq_4437 NC_015061.1 4862846 4863103 R PFAM: protein of unknown function DUF37; KEGG: ddd:Dda3937_01062 hypothetical protein; hypothetical protein complement(4862846..4863103) Rahnella sp. Y9602 10215498 YP_004215151.1 CDS Rahaq_4438 NC_015061.1 4863067 4863393 R KEGG: yen:YE4176 ribonuclease P; TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; ribonuclease P complement(4863067..4863393) Rahnella sp. Y9602 10215499 YP_004215152.1 CDS Rahaq_4439 NC_015061.1 4863445 4863585 R KEGG: pwa:Pecwa_4618 50S ribosomal protein L34; TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34; 50S ribosomal protein L34 complement(4863445..4863585) Rahnella sp. Y9602 10215500 YP_004215153.1 CDS Rahaq_4440 NC_015062.1 208 1485 D KEGG: eca:ECA2240 lipoprotein; manually curated; PFAM: protein of unknown function DUF187; hypothetical protein 208..1485 Rahnella sp. Y9602 10216161 YP_004215154.1 CDS Rahaq_4441 NC_015062.1 1554 3764 R KEGG: ebi:EbC_03350 TonB-dependent receptor for Fe(III)-coprogen, Fe(III)-ferrioxamine B and Fe(III)-rhodotrulic acid; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; TonB-dependent siderophore receptor complement(1554..3764) Rahnella sp. Y9602 10215556 YP_004215155.1 CDS Rahaq_4442 NC_015062.1 3985 5379 R KEGG: ebi:EbC_21120 conserved uncharacterized protein; hypothetical protein complement(3985..5379) Rahnella sp. Y9602 10215557 YP_004215156.1 CDS Rahaq_4443 NC_015062.1 5515 6147 D KEGG: ent:Ent638_2177 hypothetical protein; hypothetical protein 5515..6147 Rahnella sp. Y9602 10215558 YP_004215157.1 CDS Rahaq_4444 NC_015062.1 6200 6595 R PFAM: YebG family protein; KEGG: ent:Ent638_1887 YebG family protein; hypothetical protein complement(6200..6595) Rahnella sp. Y9602 10215559 YP_004215158.1 CDS Rahaq_4445 NC_015062.1 6789 7253 D PFAM: GCN5-related N-acetyltransferase; KEGG: pam:PANA_4172 hypothetical protein; N-acetyltransferase GCN5 6789..7253 Rahnella sp. Y9602 10215560 YP_004215159.1 CDS Rahaq_4447 NC_015062.1 7369 8244 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ent:Ent638_1889 LysR family transcriptional regulator; LysR family transcriptional regulator complement(7369..8244) Rahnella sp. Y9602 10215562 YP_004215160.1 CDS Rahaq_4448 NC_015062.1 8359 9348 D PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ent:Ent638_1888 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 8359..9348 Rahnella sp. Y9602 10215563 YP_004215161.1 CDS Rahaq_4449 NC_015062.1 9392 9790 R KEGG: pct:PC1_0653 hypothetical protein; hypothetical protein complement(9392..9790) Rahnella sp. Y9602 10215564 YP_004215162.1 CDS Rahaq_4450 NC_015062.1 9794 10519 R PFAM: protein of unknown function DUF81; KEGG: ddc:Dd586_0859 protein of unknown function DUF81; hypothetical protein complement(9794..10519) Rahnella sp. Y9602 10215565 YP_004215163.1 CDS Rahaq_4451 NC_015062.1 10627 11517 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpd:BURPS668_A0906 LysR family transcriptional regulator; LysR family transcriptional regulator 10627..11517 Rahnella sp. Y9602 10215566 YP_004215164.1 CDS Rahaq_4452 NC_015062.1 11508 13178 R KEGG: set:SEN3426 trehalase; PFAM: glycoside hydrolase family 37; alpha,alpha-trehalase complement(11508..13178) Rahnella sp. Y9602 10215567 YP_004215165.1 CDS Rahaq_4453 NC_015062.1 13206 14612 R TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; KEGG: pam:PANA_2235 OtsA; PFAM: glycosyl transferase family 20; alpha,alpha-trehalose-phosphate synthase (UDP-forming) complement(13206..14612) Rahnella sp. Y9602 10215568 YP_004215166.1 CDS Rahaq_4454 NC_015062.1 14609 15403 R KEGG: pam:PANA_2236 OtsB; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; trehalose-phosphatase complement(14609..15403) Rahnella sp. Y9602 10215569 YP_004215167.1 CDS Rahaq_4455 NC_015062.1 15585 15950 R PFAM: Protein of unknown function DUF2493; KEGG: kva:Kvar_3148 protein of unknown function DUF2493; hypothetical protein complement(15585..15950) Rahnella sp. Y9602 10215570 YP_004215168.1 CDS Rahaq_4456 NC_015062.1 15982 17655 R PFAM: Na+/Picotransporter; PhoU family protein; KEGG: kva:Kvar_3147 Na/Pi-cotransporter II-related protein; Na+/Picotransporter complement(15982..17655) Rahnella sp. Y9602 10215571 YP_004215169.1 CDS Rahaq_4457 NC_015062.1 17777 20491 R KEGG: kpe:KPK_3276 magnesium-translocating P-type ATPase; TIGRFAM: magnesium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; magnesium-translocating P-type ATPase complement(17777..20491) Rahnella sp. Y9602 10215572 YP_004215170.1 CDS Rahaq_4458 NC_015062.1 20800 21045 R KEGG: kpe:KPK_3274 hypothetical protein; hypothetical protein complement(20800..21045) Rahnella sp. Y9602 10215573 YP_004215171.1 CDS Rahaq_4459 NC_015062.1 21391 22071 R PFAM: Oligogalacturonate-specific porin; KEGG: ent:Ent638_3298 oligogalacturonate-specific porin; oligogalacturonate-specific porin complement(21391..22071) Rahnella sp. Y9602 10215574 YP_004215172.1 CDS Rahaq_4460 NC_015062.1 22140 24308 R KEGG: pwa:Pecwa_4562 exopolygalacturonate lyase; exopolygalacturonate lyase complement(22140..24308) Rahnella sp. Y9602 10215575 YP_004215173.1 CDS Rahaq_4461 NC_015062.1 24394 25959 R KEGG: kva:Kvar_1707 oligogalacturonide transporter; oligogalacturonide transporter complement(24394..25959) Rahnella sp. Y9602 10215576 YP_004215174.1 CDS Rahaq_4462 NC_015062.1 26346 27326 R PFAM: protein of unknown function DUF535; KEGG: ebi:EbC_03470 virulence protein; hypothetical protein complement(26346..27326) Rahnella sp. Y9602 10215577 YP_004215175.1 CDS Rahaq_4463 NC_015062.1 27623 28360 D PFAM: phosphoesterase PA-phosphatase related; KEGG: kpu:KP1_2232 acid phosphatase; SMART: phosphoesterase PA-phosphatase related; acid phosphatase 27623..28360 Rahnella sp. Y9602 10215578 YP_004215176.1 CDS Rahaq_4464 NC_015062.1 28529 29020 D KEGG: ctu:Ctu_40860 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; type VI secretion system effector 28529..29020 Rahnella sp. Y9602 10215579 YP_004215177.1 CDS Rahaq_4465 NC_015062.1 29033 29557 D KEGG: ctu:Ctu_40850 hypothetical protein; hypothetical protein 29033..29557 Rahnella sp. Y9602 10215580 YP_004215178.1 CDS Rahaq_4466 NC_015062.1 29535 29846 D KEGG: zmn:Za10_0201 histidine kinase; hypothetical protein 29535..29846 Rahnella sp. Y9602 10215581 YP_004215179.1 CDS Rahaq_4467 NC_015062.1 29898 30980 R PFAM: iron-containing alcohol dehydrogenase; KEGG: spe:Spro_2371 hypothetical protein; iron-containing alcohol dehydrogenase complement(29898..30980) Rahnella sp. Y9602 10215582 YP_004215180.1 CDS Rahaq_4468 NC_015062.1 31202 32269 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: spe:Spro_2370 hypothetical protein; LacI family transcriptional regulator 31202..32269 Rahnella sp. Y9602 10215583 YP_004215181.1 CDS Rahaq_4469 NC_015062.1 32279 33526 D KEGG: spe:Spro_2369 hypothetical protein; hypothetical protein 32279..33526 Rahnella sp. Y9602 10215584 YP_004215182.1 CDS Rahaq_4470 NC_015062.1 33547 34470 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: eta:ETA_33700 hypothetical protein; hypothetical protein complement(33547..34470) Rahnella sp. Y9602 10215585 YP_004215183.1 CDS Rahaq_4471 NC_015062.1 34611 35333 D KEGG: spe:Spro_2330 lipoprotein; lipoprotein 34611..35333 Rahnella sp. Y9602 10215586 YP_004215184.1 CDS Rahaq_4472 NC_015062.1 35463 36908 D KEGG: pct:PC1_0027 major facilitator superfamily MFS_1; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA subfamily drug resistance transporter 35463..36908 Rahnella sp. Y9602 10215587 YP_004215185.1 CDS Rahaq_4473 NC_015062.1 36959 37849 D PFAM: dihydrodipicolinate synthetase; KEGG: plu:plu1530 hypothetical protein; dihydrodipicolinate synthetase 36959..37849 Rahnella sp. Y9602 10215588 YP_004215186.1 CDS Rahaq_4474 NC_015062.1 38093 38500 D KEGG: mxa:MXAN_0698 hypothetical protein; hypothetical protein 38093..38500 Rahnella sp. Y9602 10215589 YP_004215187.1 CDS Rahaq_4475 NC_015062.1 38710 40059 D KEGG: ebi:EbC_20980 virulence effector protein SrfA; virulence effector protein SrfA 38710..40059 Rahnella sp. Y9602 10215590 YP_004215188.1 CDS Rahaq_4476 NC_015062.1 40064 43036 D PFAM: virulence protein SrfB; KEGG: pwa:Pecwa_2382 virulence protein SrfB; virulence protein SrfB 40064..43036 Rahnella sp. Y9602 10215591 YP_004215189.1 CDS Rahaq_4477 NC_015062.1 43033 45408 D PFAM: Virulence effector, SrfC; KEGG: dda:Dd703_1880 virulence factor; Virulence effector, SrfC 43033..45408 Rahnella sp. Y9602 10215592 YP_004215190.1 CDS Rahaq_4478 NC_015062.1 45601 46650 D PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: spe:Spro_3568 fructose-bisphosphate aldolase; deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase 45601..46650 Rahnella sp. Y9602 10215593 YP_004215191.1 CDS Rahaq_4479 NC_015062.1 46715 47395 R PFAM: hypothetical protein; KEGG: ebi:EbC_11790 ThiJ/PfpI domain protein; hypothetical protein complement(46715..47395) Rahnella sp. Y9602 10215594 YP_004215192.1 CDS Rahaq_4480 NC_015062.1 47509 48135 R PFAM: regulatory protein TetR; KEGG: sgl:SG0229 transcriptional regulator; TetR family transcriptional regulator complement(47509..48135) Rahnella sp. Y9602 10215595 YP_004215193.1 CDS Rahaq_4481 NC_015062.1 48322 50007 D PFAM: Heat shock protein 70; KEGG: esa:ESA_02869 hypothetical protein; Heat shock protein 70 48322..50007 Rahnella sp. Y9602 10215596 YP_004215194.1 CDS Rahaq_4482 NC_015062.1 50012 50584 D PFAM: heat shock protein DnaJ domain protein; KEGG: esa:ESA_02868 hypothetical protein; heat shock protein DnaJ domain-containing protein 50012..50584 Rahnella sp. Y9602 10215597 YP_004215195.1 CDS Rahaq_4483 NC_015062.1 50613 51956 D KEGG: ctu:Ctu_10100 hypothetical protein; hypothetical protein 50613..51956 Rahnella sp. Y9602 10215598 YP_004215196.1 CDS Rahaq_4484 NC_015062.1 51989 53470 R KEGG: epy:EpC_14960 cytoplasmic alpha-amylase; PFAM: alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; alpha amylase complement(51989..53470) Rahnella sp. Y9602 10215599 YP_004215197.1 CDS Rahaq_4485 NC_015062.1 53593 55095 R KEGG: yen:YE3594 proline/glycine betaine transporter; TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: Osmosensory transporter coiled coil; metabolite/H+ symporter, major facilitator superfamily (MFS) complement(53593..55095) Rahnella sp. Y9602 10215600 YP_004215198.1 CDS Rahaq_4486 NC_015062.1 55388 56569 D KEGG: kpu:KP1_4543 translocation protein TolB precursor; oligogalacturonide lyase 55388..56569 Rahnella sp. Y9602 10215601 YP_004215199.1 CDS Rahaq_4487 NC_015062.1 56573 56893 D PFAM: cupin; KEGG: kva:Kvar_0815 cupin 2 conserved barrel domain protein; cupin 56573..56893 Rahnella sp. Y9602 10215602 YP_004215200.1 CDS Rahaq_4488 NC_015062.1 56961 57599 R PFAM: ribose/galactose isomerase; KEGG: ypb:YPTS_2039 hypothetical protein; ribose/galactose isomerase complement(56961..57599) Rahnella sp. Y9602 10215603 YP_004215201.1 CDS Rahaq_4489 NC_015062.1 57668 58429 R KEGG: kva:Kvar_0805 2-deoxy-D-gluconate 3-dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; 2-deoxy-D-gluconate 3-dehydrogenase complement(57668..58429) Rahnella sp. Y9602 10215604 YP_004215202.1 CDS Rahaq_4490 NC_015062.1 58637 58933 D KEGG: bfo:BRAFLDRAFT_127718 hypothetical protein; hypothetical protein 58637..58933 Rahnella sp. Y9602 10215605 YP_004215203.1 CDS Rahaq_4491 NC_015062.1 58826 59182 R KEGG: spe:Spro_1931 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(58826..59182) Rahnella sp. Y9602 10215606 YP_004215204.1 CDS Rahaq_4492 NC_015062.1 59539 60762 D KEGG: spe:Spro_1930 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 59539..60762 Rahnella sp. Y9602 10215607 YP_004215205.1 CDS Rahaq_4493 NC_015062.1 60779 63931 D KEGG: spe:Spro_1929 hydrophobe/amphiphile efflux-1 (HAE1) family protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 60779..63931 Rahnella sp. Y9602 10215608 YP_004215206.1 CDS Rahaq_4494 NC_015062.1 64035 64520 R PFAM: protein of unknown function UPF0074; KEGG: spe:Spro_1928 BadM/Rrf2 family transcriptional regulator; BadM/Rrf2 family transcriptional regulator complement(64035..64520) Rahnella sp. Y9602 10215609 YP_004215207.1 CDS Rahaq_4496 NC_015062.1 65508 65645 D hypothetical protein 65508..65645 Rahnella sp. Y9602 10215611 YP_004215208.1 CDS Rahaq_4497 NC_015062.1 65786 66610 D KEGG: afr:AFE_1562 hypothetical protein; hypothetical protein 65786..66610 Rahnella sp. Y9602 10215612 YP_004215209.1 CDS Rahaq_4498 NC_015062.1 66607 67428 D KEGG: afr:AFE_1561 hypothetical protein; hypothetical protein 66607..67428 Rahnella sp. Y9602 10215613 YP_004215210.1 CDS Rahaq_4499 NC_015062.1 67504 67644 D hypothetical protein 67504..67644 Rahnella sp. Y9602 10215614 YP_004215211.1 CDS Rahaq_4500 NC_015062.1 67787 67987 R KEGG: ent:Ent638_4271 hypothetical protein; hypothetical protein complement(67787..67987) Rahnella sp. Y9602 10215615 YP_004215212.1 CDS Rahaq_4501 NC_015062.1 68653 70221 D KEGG: zmo:ZMO0352 hypothetical protein; hypothetical protein 68653..70221 Rahnella sp. Y9602 10215616 YP_004215213.1 CDS Rahaq_4503 NC_015062.1 70823 72112 R KEGG: ent:Ent638_2216 hypothetical protein; hypothetical protein complement(70823..72112) Rahnella sp. Y9602 10215618 YP_004215214.1 CDS Rahaq_4504 NC_015062.1 72171 72407 R KEGG: ent:Ent638_2217 hypothetical protein; hypothetical protein complement(72171..72407) Rahnella sp. Y9602 10215619 YP_004215215.1 CDS Rahaq_4505 NC_015062.1 72532 73206 R KEGG: ent:Ent638_2218 hypothetical protein; hypothetical protein complement(72532..73206) Rahnella sp. Y9602 10215620 YP_004215216.1 CDS Rahaq_4506 NC_015062.1 73523 76708 R PFAM: protein of unknown function DUF1983; Fibronectin type III domain protein; KEGG: ent:Ent638_2219 fibronectin, type III domain-containing protein; hypothetical protein complement(73523..76708) Rahnella sp. Y9602 10215621 YP_004215217.1 CDS Rahaq_4507 NC_015062.1 76769 77347 R PFAM: lambda tail assembly I; KEGG: ent:Ent638_2220 bacteriophage lambda tail assembly I; lambda tail assembly I complement(76769..77347) Rahnella sp. Y9602 10215622 YP_004215218.1 CDS Rahaq_4508 NC_015062.1 77400 77807 R KEGG: ebi:EbC_32310 hypothetical protein; hypothetical protein complement(77400..77807) Rahnella sp. Y9602 10215623 YP_004215219.1 CDS Rahaq_4509 NC_015062.1 77868 78599 R KEGG: enc:ECL_01713 GP19; PFAM: NLP/P60 protein; SMART: Mov34/MPN/PAD-1 family protein; NLP/P60 protein complement(77868..78599) Rahnella sp. Y9602 10215624 YP_004215220.1 CDS Rahaq_4510 NC_015062.1 78602 80260 R KEGG: ent:Ent638_2223 phage minor tail protein L; TIGRFAM: phage minor tail protein L; PFAM: minor tail protein L; phage minor tail protein L complement(78602..80260) Rahnella sp. Y9602 10215625 YP_004215221.1 CDS Rahaq_4511 NC_015062.1 80260 80616 R PFAM: minor tail family protein; KEGG: pmr:PMI0523 phage minor tail protein; minor tail family protein complement(80260..80616) Rahnella sp. Y9602 10215626 YP_004215222.1 CDS Rahaq_4512 NC_015062.1 80635 82986 R KEGG: ecz:ECS88_1205 minor tail protein precursor H; TIGRFAM: phage tail tape measure protein, lambda family; PFAM: Prophage tail length tape measure; phage tail tape measure protein, lambda family complement(80635..82986) Rahnella sp. Y9602 10215627 YP_004215223.1 CDS Rahaq_4513 NC_015062.1 82967 83281 R KEGG: ebd:ECBD_2861 phage tail assembly protein T; TIGRFAM: phage tail assembly protein T; PFAM: Minor tail T family protein; phage tail assembly protein T complement(82967..83281) Rahnella sp. Y9602 10215628 YP_004215224.1 CDS Rahaq_4514 NC_015062.1 83302 83718 R KEGG: enc:ECL_01708 GP14; TIGRFAM: phage minor tail protein G; PFAM: minor tail protein G; phage minor tail protein G complement(83302..83718) Rahnella sp. Y9602 10215629 YP_004215225.1 CDS Rahaq_4515 NC_015062.1 83729 84466 R KEGG: enc:ECL_01707 GP13; PFAM: Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; Ig domain-containing protein group 2 domain-containing protein complement(83729..84466) Rahnella sp. Y9602 10215630 YP_004215226.1 CDS Rahaq_4516 NC_015062.1 84474 84878 R PFAM: minor tail U; KEGG: enc:ECL_01706 minor tail protein U; minor tail family protein complement(84474..84878) Rahnella sp. Y9602 10215631 YP_004215227.1 CDS Rahaq_4517 NC_015062.1 84875 85429 R PFAM: Prophage minor tail Z family protein; KEGG: enc:ECL_01705 GP11; prophage minor tail Z family protein complement(84875..85429) Rahnella sp. Y9602 10215632 YP_004215228.1 CDS Rahaq_4518 NC_015062.1 85441 85716 R KEGG: sew:SeSA_A0697 hypothetical protein; hypothetical protein complement(85441..85716) Rahnella sp. Y9602 10215633 YP_004215229.1 CDS Rahaq_4519 NC_015062.1 85709 86035 R PFAM: protein of unknown function UCP030771; KEGG: enc:ECL_01703 hypothetical protein; hypothetical protein complement(85709..86035) Rahnella sp. Y9602 10215634 YP_004215230.1 CDS Rahaq_4520 NC_015062.1 86121 88151 R PFAM: peptidase S14 ClpP; KEGG: eoi:ECO111_3370 protease/scaffold protein; peptidase S14 ClpP complement(86121..88151) Rahnella sp. Y9602 10215635 YP_004215231.1 CDS Rahaq_4521 NC_015062.1 88129 89607 R KEGG: eck:EC55989_1707 portal protein (head-tail preconnector protein) from prophage; TIGRFAM: phage portal protein, lambda family; PFAM: portal protein lambda; phage portal protein, lambda family complement(88129..89607) Rahnella sp. Y9602 10215636 YP_004215232.1 CDS Rahaq_4522 NC_015062.1 89604 89822 R KEGG: ect:ECIAI39_4880 conserved hypothetical protein from prophage; hypothetical protein complement(89604..89822) Rahnella sp. Y9602 10215637 YP_004215233.1 CDS Rahaq_4523 NC_015062.1 89819 91921 R PFAM: terminase GpA; KEGG: eci:UTI89_C5117 DNA packaging protein of prophage CP-933K; terminase GpA complement(89819..91921) Rahnella sp. Y9602 10215638 YP_004215234.1 CDS Rahaq_4524 NC_015062.1 91921 92409 R PFAM: protein of unknown function DUF1441; KEGG: enc:ECL_01685 hypothetical protein; hypothetical protein complement(91921..92409) Rahnella sp. Y9602 10215639 YP_004215235.1 CDS Rahaq_4525 NC_015062.1 92841 93134 D KEGG: sdy:SDY_2015 hypothetical protein; hypothetical protein 92841..93134 Rahnella sp. Y9602 10215640 YP_004215236.1 CDS Rahaq_4526 NC_015062.1 93131 93634 R PFAM: lysis protein; KEGG: xbo:XBJ1_1386 endopeptidase; lysis protein complement(93131..93634) Rahnella sp. Y9602 10215641 YP_004215237.1 CDS Rahaq_4527 NC_015062.1 93627 94166 R KEGG: cko:CKO_01876 hypothetical protein; PFAM: glycoside hydrolase family 24; lysozyme complement(93627..94166) Rahnella sp. Y9602 10215642 YP_004215238.1 CDS Rahaq_4528 NC_015062.1 94166 94369 R PFAM: Lysis S family protein; KEGG: ecd:ECDH10B_1338 lysis S family protein; Lysis S family protein complement(94166..94369) Rahnella sp. Y9602 10215643 YP_004215239.1 CDS Rahaq_4529 NC_015062.1 94805 95860 R PFAM: DNA methylase N-4/N-6 domain protein; KEGG: xbo:XBJ1_1254 hypothetical protein; DNA methylase N-4/N-6 domain-containing protein complement(94805..95860) Rahnella sp. Y9602 10215644 YP_004215240.1 CDS Rahaq_4530 NC_015062.1 96130 96381 R KEGG: eic:NT01EI_1431 hypothetical protein; hypothetical protein complement(96130..96381) Rahnella sp. Y9602 10215645 YP_004215241.1 CDS Rahaq_4531 NC_015062.1 96587 96799 D hypothetical protein 96587..96799 Rahnella sp. Y9602 10215646 YP_004215242.1 CDS Rahaq_4532 NC_015062.1 96908 97249 D KEGG: apt:APA01_23270 hypothetical protein; hypothetical protein 96908..97249 Rahnella sp. Y9602 10215647 YP_004215243.1 CDS Rahaq_4534 NC_015062.1 97969 98790 R PFAM: antitermination protein; KEGG: kpu:KP1_2171 prophage antitermination protein; antitermination protein complement(97969..98790) Rahnella sp. Y9602 10215649 YP_004215244.1 CDS Rahaq_4535 NC_015062.1 98804 99817 R SMART: HNH nuclease; KEGG: epy:EpC_20670 conserved uncharacterized protein; HNH nuclease complement(98804..99817) Rahnella sp. Y9602 10215650 YP_004215245.1 CDS Rahaq_4536 NC_015062.1 99969 100724 R PFAM: MT-A70 family protein; KEGG: kpe:KPK_4187 adenine-specific DNA methyltransferase; MT-A70 family protein complement(99969..100724) Rahnella sp. Y9602 10215651 YP_004215246.1 CDS Rahaq_4537 NC_015062.1 100721 101569 R KEGG: eoh:ECO103_5189 hypothetical protein; hypothetical protein complement(100721..101569) Rahnella sp. Y9602 10215652 YP_004215247.1 CDS Rahaq_4538 NC_015062.1 101566 102588 R KEGG: cro:ROD_26171 hypothetical protein; hypothetical protein complement(101566..102588) Rahnella sp. Y9602 10215653 YP_004215248.1 CDS Rahaq_4539 NC_015062.1 102578 102937 R KEGG: epy:EpC_20730 hypothetical protein; hypothetical protein complement(102578..102937) Rahnella sp. Y9602 10215654 YP_004215249.1 CDS Rahaq_4540 NC_015062.1 102945 103451 R KEGG: epy:EpC_20740 hypothetical protein; hypothetical protein complement(102945..103451) Rahnella sp. Y9602 10215655 YP_004215250.1 CDS Rahaq_4541 NC_015062.1 103493 103732 R KEGG: enc:ECL_01302 predicted antirepressor protein Cro; antirepressor protein Cro complement(103493..103732) Rahnella sp. Y9602 10215656 YP_004215251.1 CDS Rahaq_4542 NC_015062.1 103850 104560 D KEGG: efe:EFER_2722 regulatory protein CI from bacteriophage origin; PFAM: Peptidase S24/S26A/S26B, conserved region; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; phage repressor 103850..104560 Rahnella sp. Y9602 10215657 YP_004215252.1 CDS Rahaq_4543 NC_015062.1 104664 104906 D KEGG: nhl:Nhal_1914 HicA protein; HicA protein 104664..104906 Rahnella sp. Y9602 10215658 YP_004215253.1 CDS Rahaq_4544 NC_015062.1 104910 105368 D KEGG: nhl:Nhal_1915 HicB family protein; HicB family protein 104910..105368 Rahnella sp. Y9602 10215659 YP_004215254.1 CDS Rahaq_4545 NC_015062.1 105368 105763 D KEGG: npu:Npun_F3172 beta-ketoacyl synthase; hypothetical protein 105368..105763 Rahnella sp. Y9602 10215660 YP_004215255.1 CDS Rahaq_4546 NC_015062.1 106275 106484 D KEGG: ecd:ECDH10B_1325 hypothetical protein; hypothetical protein 106275..106484 Rahnella sp. Y9602 10215661 YP_004215256.1 CDS Rahaq_4547 NC_015062.1 106515 106673 D hypothetical protein 106515..106673 Rahnella sp. Y9602 10215662 YP_004215257.1 CDS Rahaq_4548 NC_015062.1 107490 107981 D KEGG: epy:EpC_20820 hypothetical protein; hypothetical protein 107490..107981 Rahnella sp. Y9602 10215663 YP_004215258.1 CDS Rahaq_4549 NC_015062.1 107983 108279 D KEGG: sgl:SG1561 hypothetical protein; hypothetical protein 107983..108279 Rahnella sp. Y9602 10215664 YP_004215259.1 CDS Rahaq_4550 NC_015062.1 108479 108721 D PFAM: excisionase; KEGG: ecz:ECS88_1328 phage excisionase; excisionase 108479..108721 Rahnella sp. Y9602 10215665 YP_004215260.1 CDS Rahaq_4551 NC_015062.1 108705 109829 D PFAM: lambda integrase ; integrase family protein; KEGG: sgl:SG1699 phage integrase; lambda integrase 108705..109829 Rahnella sp. Y9602 10215666 YP_004215261.1 CDS Rahaq_4552 NC_015062.1 109904 110575 R PFAM: porin Gram-negative type; KEGG: ecz:ECS88_1492 outer membrane pore protein N, non-specific; porin complement(109904..110575) Rahnella sp. Y9602 10215667 YP_004215262.1 CDS Rahaq_4553 NC_015062.1 111185 111373 R KEGG: kva:Kvar_4083 hypothetical protein; hypothetical protein complement(111185..111373) Rahnella sp. Y9602 10215668 YP_004215263.1 CDS Rahaq_4555 NC_015062.1 112175 112954 D KEGG: dze:Dd1591_0974 acetoin reductase; TIGRFAM: acetoin reductase; PFAM: short-chain dehydrogenase/reductase SDR; acetoin reductase 112175..112954 Rahnella sp. Y9602 10215670 YP_004215264.1 CDS Rahaq_4556 NC_015062.1 113019 113885 R KEGG: pam:PANA_0651 Rob; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(113019..113885) Rahnella sp. Y9602 10215671 YP_004215265.1 CDS Rahaq_4557 NC_015062.1 114306 115874 R PFAM: Tannase and feruloyl esterase; KEGG: ara:Arad_2086 tannase and feruloyl esterase; tannase and feruloyl esterase complement(114306..115874) Rahnella sp. Y9602 10215672 YP_004215266.1 CDS Rahaq_4558 NC_015062.1 116242 116409 D KEGG: pmr:PMI3460 lipoprotein; lipoprotein 116242..116409 Rahnella sp. Y9602 10215673 YP_004215267.1 CDS Rahaq_4559 NC_015062.1 116707 118848 R PFAM: protein of unknown function DUF323; Methyltransferase type 11; KEGG: ebi:EbC_00030 conserved uncharacterized protein; hypothetical protein complement(116707..118848) Rahnella sp. Y9602 10215674 YP_004215268.1 CDS Rahaq_4560 NC_015062.1 118995 120119 R PFAM: integrase family protein; KEGG: pam:PANA_4235 IntA; integrase family protein complement(118995..120119) Rahnella sp. Y9602 10215675 YP_004215269.1 CDS Rahaq_4561 NC_015062.1 120526 122073 D TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: pam:PANA_0296 Aer; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 120526..122073 Rahnella sp. Y9602 10215676 YP_004215270.1 CDS Rahaq_4562 NC_015062.1 122146 123693 R KEGG: ebi:EbC_17630 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer complement(122146..123693) Rahnella sp. Y9602 10215677 YP_004215271.1 CDS Rahaq_4563 NC_015062.1 124539 125033 D KEGG: spe:Spro_1783 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: Uncharacterised conserved protein UCP028301; type VI secretion protein 124539..125033 Rahnella sp. Y9602 10215678 YP_004215272.1 CDS Rahaq_4564 NC_015062.1 125071 126612 D KEGG: spe:Spro_1784 hypothetical protein; TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; type VI secretion protein EvpB 125071..126612 Rahnella sp. Y9602 10215679 YP_004215273.1 CDS Rahaq_4565 NC_015062.1 126628 127977 D KEGG: pay:PAU_03059 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; type VI secretion protein 126628..127977 Rahnella sp. Y9602 10215680 YP_004215274.1 CDS Rahaq_4566 NC_015062.1 127974 128648 D KEGG: ctu:Ctu_19310 hypothetical protein; TIGRFAM: type IV / VI secretion system protein, DotU family; PFAM: type IV / VI secretion system, DotU; DotU family type IV / VI secretion system protein 127974..128648 Rahnella sp. Y9602 10215681 YP_004215275.1 CDS Rahaq_4567 NC_015062.1 128650 130326 D PFAM: OmpA/MotB domain protein; KEGG: eay:EAM_0371 outer membrane protein; OmpA/MotB domain-containing protein 128650..130326 Rahnella sp. Y9602 10215682 YP_004215276.1 CDS Rahaq_4568 NC_015062.1 130359 130850 D KEGG: ctu:Ctu_19330 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; type VI secretion system effector 130359..130850 Rahnella sp. Y9602 10215683 YP_004215277.1 CDS Rahaq_4569 NC_015062.1 130947 133667 D TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: eay:EAM_0373 ATPase/chaperone; SMART: AAA ATPase; type VI secretion ATPase, ClpV1 family 130947..133667 Rahnella sp. Y9602 10215684 YP_004215278.1 CDS Rahaq_4570 NC_015062.1 133664 136006 D KEGG: ses:SARI_02626 hypothetical protein; TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; PFAM: Protein of unknown function DUF2345; Rhs element Vgr protein 133664..136006 Rahnella sp. Y9602 10215685 YP_004215279.1 CDS Rahaq_4571 NC_015062.1 136121 136636 D KEGG: ebi:EbC_03460 conserved uncharacterized protein; hypothetical protein 136121..136636 Rahnella sp. Y9602 10215686 YP_004215280.1 CDS Rahaq_4572 NC_015062.1 136653 140141 D KEGG: ctu:Ctu_19400 hypothetical protein; hypothetical protein 136653..140141 Rahnella sp. Y9602 10215687 YP_004215281.1 CDS Rahaq_4573 NC_015062.1 140157 140714 D KEGG: dac:Daci_0205 hypothetical protein; hypothetical protein 140157..140714 Rahnella sp. Y9602 10215688 YP_004215282.1 CDS Rahaq_4574 NC_015062.1 140730 141179 D KEGG: sec:SC2148 hypothetical protein; hypothetical protein 140730..141179 Rahnella sp. Y9602 10215689 YP_004215283.1 CDS Rahaq_4575 NC_015062.1 141207 141737 D KEGG: sew:SeSA_A3723 hypothetical protein; hypothetical protein 141207..141737 Rahnella sp. Y9602 10215690 YP_004215284.1 CDS Rahaq_4576 NC_015062.1 141799 142062 D KEGG: ses:SARI_02623 hypothetical protein; hypothetical protein 141799..142062 Rahnella sp. Y9602 10215691 YP_004215285.1 CDS Rahaq_4577 NC_015062.1 142065 143276 D KEGG: ses:SARI_02614 hypothetical protein; hypothetical protein 142065..143276 Rahnella sp. Y9602 10215692 YP_004215286.1 CDS Rahaq_4578 NC_015062.1 143273 146689 D PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: ses:SARI_02612 hypothetical protein; ImcF domain-containing protein 143273..146689 Rahnella sp. Y9602 10215693 YP_004215287.1 CDS Rahaq_4579 NC_015062.1 146789 148558 D KEGG: ses:SARI_02606 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; type VI secretion protein 146789..148558 Rahnella sp. Y9602 10215694 YP_004215288.1 CDS Rahaq_4580 NC_015062.1 148522 149604 D KEGG: eay:EAM_0382 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; type VI secretion protein 148522..149604 Rahnella sp. Y9602 10215695 YP_004215289.1 CDS Rahaq_4581 NC_015062.1 149668 150210 D TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: ses:SARI_02604 hypothetical protein; type VI secretion lipoprotein 149668..150210 Rahnella sp. Y9602 10215696 YP_004215290.1 CDS Rahaq_4582 NC_015062.1 150223 152745 D KEGG: ses:SARI_00371 hypothetical protein; TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; PFAM: Protein of unknown function DUF2345; Rhs element Vgr protein 150223..152745 Rahnella sp. Y9602 10215697 YP_004215291.1 CDS Rahaq_4583 NC_015062.1 152761 154215 D KEGG: kpn:KPN_03171 hypothetical protein; hypothetical protein 152761..154215 Rahnella sp. Y9602 10215698 YP_004215292.1 CDS Rahaq_4584 NC_015062.1 154215 155267 D KEGG: ent:Ent638_2910 ImpA domain-containing protein; ImpA domain-containing protein 154215..155267 Rahnella sp. Y9602 10215699 YP_004215293.1 CDS Rahaq_4585 NC_015062.1 155355 156404 D KEGG: ent:Ent638_2910 ImpA domain-containing protein; ImpA domain-containing protein 155355..156404 Rahnella sp. Y9602 10215700 YP_004215294.1 CDS Rahaq_4586 NC_015062.1 156494 157333 D KEGG: ent:Ent638_2907 hypothetical protein; hypothetical protein 156494..157333 Rahnella sp. Y9602 10215701 YP_004215295.1 CDS Rahaq_4587 NC_015062.1 157534 159138 D KEGG: ypz:YPZ3_1350 hypothetical protein; TIGRFAM: type VI secretion-associated protein, VC_A0119 family; PFAM: ImpA domain protein; type VI secretion-associated protein 157534..159138 Rahnella sp. Y9602 10215702 YP_004215296.1 CDS Rahaq_4588 NC_015062.1 159158 159589 D KEGG: ypb:YPTS_1613 type VI secretion system lysozyme-related protein; TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; type VI secretion system lysozyme-like protein 159158..159589 Rahnella sp. Y9602 10215703 YP_004215297.1 CDS Rahaq_4589 NC_015062.1 159534 159659 R hypothetical protein complement(159534..159659) Rahnella sp. Y9602 10215704 YP_004215298.1 CDS Rahaq_4590 NC_015062.1 159751 160560 D KEGG: sei:SPC_0512 probable secreted protein; secreted protein 159751..160560 Rahnella sp. Y9602 10215705 YP_004215299.1 CDS Rahaq_4591 NC_015062.1 160643 162037 D PFAM: ImpA domain protein; KEGG: ebi:EbC_04230 ImpA domain protein; ImpA domain-containing protein 160643..162037 Rahnella sp. Y9602 10215706 YP_004215300.1 CDS Rahaq_4592 NC_015062.1 162087 162557 D KEGG: kpu:KP1_2422 hypothetical protein; hypothetical protein 162087..162557 Rahnella sp. Y9602 10215707 YP_004215301.1 CDS Rahaq_4593 NC_015062.1 163105 164529 D PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: yen:YE2471 cytochrome oxidase subunit; cytochrome bd ubiquinol oxidase subunit I 163105..164529 Rahnella sp. Y9602 10215708 YP_004215302.1 CDS Rahaq_4594 NC_015062.1 164532 165539 D KEGG: pfl:PFL_5363 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase, subunit II 164532..165539 Rahnella sp. Y9602 10215709 YP_004215303.1 CDS Rahaq_4595 NC_015062.1 165551 165715 D PFAM: Protein of unknown function DUF2474; KEGG: spe:Spro_2861 hypothetical protein; hypothetical protein 165551..165715 Rahnella sp. Y9602 10215710 YP_004215304.1 CDS Rahaq_4596 NC_015062.1 165949 166527 R PFAM: regulatory protein TetR; KEGG: pct:PC1_0829 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(165949..166527) Rahnella sp. Y9602 10215711 YP_004215305.1 CDS Rahaq_4597 NC_015062.1 166575 168071 R PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2687 major facilitator transporter; major facilitator superfamily protein complement(166575..168071) Rahnella sp. Y9602 10215712 YP_004215306.1 CDS Rahaq_4598 NC_015062.1 168300 169814 R PFAM: extracellular solute-binding protein family 5; KEGG: ddc:Dd586_2914 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein complement(168300..169814) Rahnella sp. Y9602 10215713 YP_004215307.1 CDS Rahaq_4599 NC_015062.1 169795 170844 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ddc:Dd586_2915 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(169795..170844) Rahnella sp. Y9602 10215714 YP_004215308.1 CDS Rahaq_4600 NC_015062.1 170828 171805 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ddc:Dd586_2916 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(170828..171805) Rahnella sp. Y9602 10215715 YP_004215309.1 CDS Rahaq_4601 NC_015062.1 171802 172662 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddd:Dda3937_00838 ABC transporter permease; binding-protein-dependent transport system inner membrane protein complement(171802..172662) Rahnella sp. Y9602 10215716 YP_004215310.1 CDS Rahaq_4602 NC_015062.1 172659 173597 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddc:Dd586_2918 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(172659..173597) Rahnella sp. Y9602 10215717 YP_004215311.1 CDS Rahaq_4603 NC_015062.1 173825 174580 D KEGG: ddc:Dd586_2919 transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; SMART: regulatory protein LuxR; LuxR family transcriptional regulator 173825..174580 Rahnella sp. Y9602 10215718 YP_004215312.1 CDS Rahaq_4604 NC_015062.1 174670 175569 D TIGRFAM: proline-specific peptidase; KEGG: ddd:Dda3937_00843 peptidase S33, tricorn interacting factor 1; PFAM: alpha/beta hydrolase fold; proline-specific peptidase 174670..175569 Rahnella sp. Y9602 10215719 YP_004215313.1 CDS Rahaq_4605 NC_015062.1 175648 176634 R KEGG: ebi:EbC_pEb17201610 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(175648..176634) Rahnella sp. Y9602 10215720 YP_004215314.1 CDS Rahaq_4606 NC_015062.1 176695 177933 D PFAM: major facilitator superfamily MFS_1; KEGG: ent:Ent638_1531 major facilitator transporter; major facilitator superfamily protein 176695..177933 Rahnella sp. Y9602 10215721 YP_004215315.1 CDS Rahaq_4607 NC_015062.1 178467 179900 D PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: pam:PANA_3246 CydA; cytochrome bd ubiquinol oxidase subunit I 178467..179900 Rahnella sp. Y9602 10215722 YP_004215316.1 CDS Rahaq_4608 NC_015062.1 179893 180897 D KEGG: pam:PANA_3245 CydB; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase, subunit II 179893..180897 Rahnella sp. Y9602 10215723 YP_004215317.1 CDS Rahaq_4609 NC_015062.1 180956 181105 D PFAM: Protein of unknown function DUF2474; KEGG: pam:PANA_3244 hypothetical protein; hypothetical protein 180956..181105 Rahnella sp. Y9602 10215724 YP_004215318.1 CDS Rahaq_4610 NC_015062.1 181135 181896 R KEGG: ebi:EbC_35010 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(181135..181896) Rahnella sp. Y9602 10215725 YP_004215319.1 CDS Rahaq_4611 NC_015062.1 182119 182859 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebi:EbC_35000 oxidoreductase; short-chain dehydrogenase/reductase SDR 182119..182859 Rahnella sp. Y9602 10215726 YP_004215320.1 CDS Rahaq_4612 NC_015062.1 182923 183765 D KEGG: ypy:YPK_2509 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; PFAM: fumarylacetoacetate (FAA) hydrolase; ureidoglycolate lyase 182923..183765 Rahnella sp. Y9602 10215727 YP_004215321.1 CDS Rahaq_4613 NC_015062.1 183792 185069 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ebi:EbC_34980 mandelate racemase/muconate lactonizing protein; mandelate racemase/muconate lactonizing protein 183792..185069 Rahnella sp. Y9602 10215728 YP_004215322.1 CDS Rahaq_4614 NC_015062.1 185104 185958 D PFAM: amidohydrolase 2; KEGG: ebi:EbC_34970 amidohydrolase 2; amidohydrolase 2 185104..185958 Rahnella sp. Y9602 10215729 YP_004215323.1 CDS Rahaq_4615 NC_015062.1 185958 186734 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebi:EbC_34960 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 185958..186734 Rahnella sp. Y9602 10215730 YP_004215324.1 CDS Rahaq_4616 NC_015062.1 186731 187075 D PFAM: protein of unknown function DUF718; KEGG: ebi:EbC_34950 conserved uncharacterized protein; hypothetical protein 186731..187075 Rahnella sp. Y9602 10215731 YP_004215325.1 CDS Rahaq_4617 NC_015062.1 187188 188426 D KEGG: ebi:EbC_34940 L-fucose transporter; TIGRFAM: L-fucose transporter; PFAM: major facilitator superfamily MFS_1; L-fucose transporter 187188..188426 Rahnella sp. Y9602 10215732 YP_004215326.1 CDS Rahaq_4618 NC_015062.1 188624 189829 D PFAM: major facilitator superfamily MFS_1; KEGG: enc:ECL_02166 major facilitator transporter; major facilitator superfamily protein 188624..189829 Rahnella sp. Y9602 10215733 YP_004215327.1 CDS Rahaq_4619 NC_015062.1 189877 190587 R KEGG: kva:Kvar_3220 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; ArsR family transcriptional regulator complement(189877..190587) Rahnella sp. Y9602 10215734 YP_004215328.1 CDS Rahaq_4620 NC_015062.1 190584 190976 R KEGG: kva:Kvar_3219 amino acid-binding ACT domain protein; amino acid-binding ACT protein complement(190584..190976) Rahnella sp. Y9602 10215735 YP_004215329.1 CDS Rahaq_4621 NC_015062.1 190969 191304 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: kva:Kvar_3218 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase complement(190969..191304) Rahnella sp. Y9602 10215736 YP_004215330.1 CDS Rahaq_4622 NC_015062.1 191569 192552 D PFAM: hypothetical protein; KEGG: pam:PANA_1614 hypothetical protein; hypothetical protein 191569..192552 Rahnella sp. Y9602 10215737 YP_004215331.1 CDS Rahaq_4623 NC_015062.1 192584 193615 D PFAM: Methionine synthase vitamin-B12 independent; KEGG: rme:Rmet_5073 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; methionine synthase 192584..193615 Rahnella sp. Y9602 10215738 YP_004215332.1 CDS Rahaq_4624 NC_015062.1 193813 194373 R PFAM: YceI family protein; KEGG: ddd:Dda3937_02951 hypothetical protein; hypothetical protein complement(193813..194373) Rahnella sp. Y9602 10215739 YP_004215333.1 CDS Rahaq_4625 NC_015062.1 194443 195573 R KEGG: aar:Acear_0937 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase complement(194443..195573) Rahnella sp. Y9602 10215740 YP_004215334.1 CDS Rahaq_4626 NC_015062.1 195848 196630 D PFAM: transcriptional regulator domain-containing protein; KEGG: ebi:EbC_17800 response regulator; transcriptional regulator domain-containing protein 195848..196630 Rahnella sp. Y9602 10215741 YP_004215335.1 CDS Rahaq_4627 NC_015062.1 196627 197118 D KEGG: ebi:EbC_17810 hypothetical protein; hypothetical protein 196627..197118 Rahnella sp. Y9602 10215742 YP_004215336.1 CDS Rahaq_4628 NC_015062.1 197318 197884 D PFAM: YfaZ family protein; KEGG: ent:Ent638_3392 YfaZ family protein; hypothetical protein 197318..197884 Rahnella sp. Y9602 10215743 YP_004215337.1 CDS Rahaq_4629 NC_015062.1 197977 198705 R TIGRFAM: peptide methionine sulfoxide reductase; KEGG: bph:Bphy_5423 peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase complement(197977..198705) Rahnella sp. Y9602 10215744 YP_004215338.1 CDS Rahaq_4630 NC_015062.1 198724 199230 R TIGRFAM: methionine-R-sulfoxide reductase; KEGG: bcj:BCAS0724 peptide methionine sulfoxide reductase family protein; PFAM: Methionine sulfoxide reductase B; Twin-arginine translocation pathway, signal sequence, subgroup; methionine-R-sulfoxide reductase complement(198724..199230) Rahnella sp. Y9602 10215745 YP_004215339.1 CDS Rahaq_4631 NC_015062.1 199471 201510 R PFAM: glycoside hydrolase family 31; KEGG: ebi:EbC_00520 glycoside hydrolase, family 31; glycoside hydrolase family protein complement(199471..201510) Rahnella sp. Y9602 10215746 YP_004215340.1 CDS Rahaq_4632 NC_015062.1 201507 202886 R TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: ebi:EbC_00510 conserved uncharacterized protein; sugar (Glycoside-Pentoside-Hexuronide) transporter complement(201507..202886) Rahnella sp. Y9602 10215747 YP_004215341.1 CDS Rahaq_4634 NC_015062.1 203362 203781 D KEGG: enc:ECL_04084 transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator 203362..203781 Rahnella sp. Y9602 10215749 YP_004215342.1 CDS Rahaq_4635 NC_015062.1 203988 204470 D KEGG: enc:ECL_01377 Hcp family type VI secretion system effector; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; type VI secretion system effector 203988..204470 Rahnella sp. Y9602 10215750 YP_004215343.1 CDS Rahaq_4636 NC_015062.1 204467 204943 D KEGG: ctu:Ctu_22470 hypothetical protein; hypothetical protein 204467..204943 Rahnella sp. Y9602 10215751 YP_004215344.1 CDS Rahaq_4637 NC_015062.1 204943 205185 D KEGG: ctp:CTRG_04817 similar to potential GABA-specific transport protein; hypothetical protein 204943..205185 Rahnella sp. Y9602 10215752 YP_004215345.1 CDS Rahaq_4638 NC_015062.1 205525 206058 D TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; KEGG: set:SEN2882 isopentenyl-diphosphate delta-isomerase; PFAM: NUDIX hydrolase; isopentenyl-diphosphate delta-isomerase 205525..206058 Rahnella sp. Y9602 10215753 YP_004215346.1 CDS Rahaq_4639 NC_015062.1 206011 206604 R PFAM: shikimate kinase; KEGG: kpe:KPK_2450 hypothetical protein; shikimate kinase complement(206011..206604) Rahnella sp. Y9602 10215754 YP_004215347.1 CDS Rahaq_4640 NC_015062.1 207053 207310 D KEGG: pwa:Pecwa_2840 hypothetical protein; hypothetical protein 207053..207310 Rahnella sp. Y9602 10215755 YP_004215348.1 CDS Rahaq_4641 NC_015062.1 207370 208227 R PFAM: Male sterility domain; KEGG: yen:YE1738 hypothetical protein; hypothetical protein complement(207370..208227) Rahnella sp. Y9602 10215756 YP_004215349.1 CDS Rahaq_4642 NC_015062.1 208348 208764 D PFAM: helix-turn-helix HxlR type; KEGG: ypb:YPTS_2505 HxlR family transcriptional regulator; HxlR family transcriptional regulator 208348..208764 Rahnella sp. Y9602 10215757 YP_004215350.1 CDS Rahaq_4643 NC_015062.1 208883 209449 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: kva:Kvar_4034 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 208883..209449 Rahnella sp. Y9602 10215758 YP_004215351.1 CDS Rahaq_4644 NC_015062.1 209464 211344 D PFAM: Amidohydrolase 3; KEGG: ebi:EbC_06450 amidohydrolase; amidohydrolase 209464..211344 Rahnella sp. Y9602 10215759 YP_004215352.1 CDS Rahaq_4645 NC_015062.1 211466 212371 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ent:Ent638_2291 LysR family transcriptional regulator; LysR family transcriptional regulator 211466..212371 Rahnella sp. Y9602 10215760 YP_004215353.1 CDS Rahaq_4646 NC_015062.1 212447 213274 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: ent:Ent638_2290 hypothetical protein; hypothetical protein 212447..213274 Rahnella sp. Y9602 10215761 YP_004215354.1 CDS Rahaq_4647 NC_015062.1 213295 214185 D KEGG: ddd:Dda3937_04144 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase 213295..214185 Rahnella sp. Y9602 10215762 YP_004215355.1 CDS Rahaq_4648 NC_015062.1 214244 215002 R PFAM: YdjC family protein; KEGG: ent:Ent638_1711 hypothetical protein; hypothetical protein complement(214244..215002) Rahnella sp. Y9602 10215763 YP_004215356.1 CDS Rahaq_4649 NC_015062.1 215049 216392 R PFAM: glycoside hydrolase family 4; KEGG: cko:CKO_01759 hypothetical protein; glycoside hydrolase family protein complement(215049..216392) Rahnella sp. Y9602 10215764 YP_004215357.1 CDS Rahaq_4650 NC_015062.1 216453 217289 R KEGG: ebd:ECBD_1910 DNA-binding transcriptional regulator ChbR; PFAM: helix-turn-helix- domain containing protein AraC type; cupin; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(216453..217289) Rahnella sp. Y9602 10215765 YP_004215358.1 CDS Rahaq_4651 NC_015062.1 217304 217651 R PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: cro:ROD_13201 N,N'-diacetylchitobiose-specific PTS system, EIIA component; phosphotransferase system PTS lactose/cellobiose-specific IIA subunit complement(217304..217651) Rahnella sp. Y9602 10215766 YP_004215359.1 CDS Rahaq_4652 NC_015062.1 217717 219075 R TIGRFAM: PTS system, cellobiose-specific IIC subunit; PTS system, lactose/cellobiose family IIC subunit; KEGG: kva:Kvar_3083 PTS system, cellobiose-specific IIC subunit; PFAM: phosphotransferase system EIIC; PTS system cellobiose-specific transporter subunit IIC complement(217717..219075) Rahnella sp. Y9602 10215767 YP_004215360.1 CDS Rahaq_4653 NC_015062.1 219203 219523 R KEGG: set:SEN1731 PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB; TIGRFAM: PTS system, lactose/cellobiose family IIB subunit; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; PTS system lactose/cellobiose family transporter subunit IIB complement(219203..219523) Rahnella sp. Y9602 10215768 YP_004215361.1 CDS Rahaq_4654 NC_015062.1 219871 220905 D KEGG: pct:PC1_0916 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator 219871..220905 Rahnella sp. Y9602 10215769 YP_004215362.1 CDS Rahaq_4655 NC_015062.1 221395 222120 D KEGG: ebi:EbC_11980 hypothetical protein; gluconate 2-dehydrogenase (acceptor) 221395..222120 Rahnella sp. Y9602 10215770 YP_004215363.1 CDS Rahaq_4656 NC_015062.1 222166 223935 D KEGG: ebi:EbC_11990 gluconate 2-dehydrogenase (acceptor); gluconate 2-dehydrogenase (acceptor) 222166..223935 Rahnella sp. Y9602 10215771 YP_004215364.1 CDS Rahaq_4657 NC_015062.1 223951 225222 D KEGG: ebi:EbC_12000 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I; gluconate 2-dehydrogenase (acceptor) 223951..225222 Rahnella sp. Y9602 10215772 YP_004215365.1 CDS Rahaq_4658 NC_015062.1 225279 225668 R KEGG: ent:Ent638_1088 cytoplasmic protein; hypothetical protein complement(225279..225668) Rahnella sp. Y9602 10215773 YP_004215366.1 CDS Rahaq_4659 NC_015062.1 225665 227053 R PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3715 major facilitator transporter; major facilitator superfamily protein complement(225665..227053) Rahnella sp. Y9602 10215774 YP_004215367.1 CDS Rahaq_4660 NC_015062.1 227168 228082 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3714 LysR family transcriptional regulator; LysR family transcriptional regulator 227168..228082 Rahnella sp. Y9602 10215775 YP_004215368.1 CDS Rahaq_4661 NC_015062.1 228110 228652 D PFAM: GCN5-related N-acetyltransferase; KEGG: kva:Kvar_2751 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 228110..228652 Rahnella sp. Y9602 10215776 YP_004215369.1 CDS Rahaq_4662 NC_015062.1 228824 229063 D KEGG: ebi:EbC_pEb17200660 conserved uncharacterized protein; hypothetical protein 228824..229063 Rahnella sp. Y9602 10215777 YP_004215370.1 CDS Rahaq_4663 NC_015062.1 229247 229540 D KEGG: ebi:EbC_27680 hypothetical protein; hypothetical protein 229247..229540 Rahnella sp. Y9602 10215778 YP_004215371.1 CDS Rahaq_4664 NC_015062.1 229485 229856 D KEGG: pam:PANA_4196 YmgB; hypothetical protein 229485..229856 Rahnella sp. Y9602 10215779 YP_004215372.1 CDS Rahaq_4665 NC_015062.1 229956 230213 D KEGG: pam:PANA_1757 YmgB; hypothetical protein 229956..230213 Rahnella sp. Y9602 10215780 YP_004215373.1 CDS Rahaq_4666 NC_015062.1 230324 231565 R KEGG: ebi:EbC_22990 diguanylate phosphodiesterase; PFAM: EAL domain protein; BLUF domain protein; SMART: EAL domain protein; diguanylate phosphodiesterase complement(230324..231565) Rahnella sp. Y9602 10215781 YP_004215374.1 CDS Rahaq_4667 NC_015062.1 231771 232370 D TIGRFAM: tellurite resistance protein TehB; KEGG: spe:Spro_0987 tellurite resistance protein TehB; tellurite resistance protein TehB 231771..232370 Rahnella sp. Y9602 10215782 YP_004215375.1 CDS Rahaq_4668 NC_015062.1 232453 232725 D PFAM: protein of unknown function DUF883 ElaB; CsbD family protein; KEGG: enc:ECL_02069 hypothetical protein; hypothetical protein 232453..232725 Rahnella sp. Y9602 10215783 YP_004215376.1 CDS Rahaq_4669 NC_015062.1 232884 233081 R KEGG: enc:ECL_01835 hypothetical protein; hypothetical protein complement(232884..233081) Rahnella sp. Y9602 10215784 YP_004215377.1 CDS Rahaq_4670 NC_015062.1 233306 233536 D KEGG: spe:Spro_2343 hypothetical protein; hypothetical protein 233306..233536 Rahnella sp. Y9602 10215785 YP_004215378.1 CDS Rahaq_4671 NC_015062.1 233577 233924 D PFAM: plasmid stabilization system; KEGG: ypg:YpAngola_0124 RelE/ParE family plasmid stabilization system protein; plasmid stabilization system 233577..233924 Rahnella sp. Y9602 10215786 YP_004215379.1 CDS Rahaq_4672 NC_015062.1 233987 234418 R TIGRFAM: peroxiredoxin, OsmC subfamily; KEGG: epy:EpC_25320 osmotically inducible protein C; PFAM: OsmC family protein; OsmC subfamily peroxiredoxin complement(233987..234418) Rahnella sp. Y9602 10215787 YP_004215380.1 CDS Rahaq_4673 NC_015062.1 234553 234732 D KEGG: pam:PANA_2839 hypothetical protein; hypothetical protein 234553..234732 Rahnella sp. Y9602 10215788 YP_004215381.1 CDS Rahaq_4674 NC_015062.1 234858 235193 D KEGG: pct:PC1_2083 steroid delta-isomerase domain-containing protein; steroid delta-isomerase domain-containing protein 234858..235193 Rahnella sp. Y9602 10215789 YP_004215382.1 CDS Rahaq_4675 NC_015062.1 235328 235687 D KEGG: ebi:EbC_38620 hypothetical protein; hypothetical protein 235328..235687 Rahnella sp. Y9602 10215790 YP_004215383.1 CDS Rahaq_4676 NC_015062.1 235759 236571 R KEGG: pam:PANA_0820 MetQ; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; lipoprotein complement(235759..236571) Rahnella sp. Y9602 10215791 YP_004215384.1 CDS Rahaq_4677 NC_015062.1 236768 237979 R PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_1381 major facilitator transporter; major facilitator superfamily protein complement(236768..237979) Rahnella sp. Y9602 10215792 YP_004215385.1 CDS Rahaq_4678 NC_015062.1 238299 238634 R PFAM: small multidrug resistance protein; KEGG: eta:ETA_34040 DMT superfamily multiple drug (quaternary ammonium compounds) efflux pump; small multidrug resistance protein complement(238299..238634) Rahnella sp. Y9602 10215793 YP_004215386.1 CDS Rahaq_4679 NC_015062.1 238920 239222 D KEGG: dze:Dd1591_0099 hypothetical protein; hypothetical protein 238920..239222 Rahnella sp. Y9602 10215794 YP_004215387.1 CDS Rahaq_4680 NC_015062.1 239203 240510 D PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: dda:Dd703_0113 Orn/DAP/Arg decarboxylase 2; Orn/DAP/Arg decarboxylase 2 239203..240510 Rahnella sp. Y9602 10215795 YP_004215388.1 CDS Rahaq_4681 NC_015062.1 240520 241431 D KEGG: dze:Dd1591_0097 hypothetical protein; hypothetical protein 240520..241431 Rahnella sp. Y9602 10215796 YP_004215389.1 CDS Rahaq_4682 NC_015062.1 241434 242441 D PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; KEGG: cai:Caci_3263 3-oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein; 3-oxoacyl-ACP synthase 241434..242441 Rahnella sp. Y9602 10215797 YP_004215390.1 CDS Rahaq_4683 NC_015062.1 242438 244018 D PFAM: AMP-dependent synthetase and ligase; KEGG: ddc:Dd586_0107 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 242438..244018 Rahnella sp. Y9602 10215798 YP_004215391.1 CDS Rahaq_4684 NC_015062.1 244029 244283 D KEGG: ddc:Dd586_0106 hypothetical protein; hypothetical protein 244029..244283 Rahnella sp. Y9602 10215799 YP_004215392.1 CDS Rahaq_4685 NC_015062.1 244284 245837 D PFAM: AMP-dependent synthetase and ligase; KEGG: ddc:Dd586_0105 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 244284..245837 Rahnella sp. Y9602 10215800 YP_004215393.1 CDS Rahaq_4686 NC_015062.1 245806 247320 D PFAM: AMP-dependent synthetase and ligase; KEGG: dze:Dd1591_0093 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 245806..247320 Rahnella sp. Y9602 10215801 YP_004215394.1 CDS Rahaq_4687 NC_015062.1 247440 247844 D KEGG: ddc:Dd586_0103 hypothetical protein; hypothetical protein 247440..247844 Rahnella sp. Y9602 10215802 YP_004215395.1 CDS Rahaq_4688 NC_015062.1 247841 248989 D PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: dze:Dd1591_0091 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 247841..248989 Rahnella sp. Y9602 10215803 YP_004215396.1 CDS Rahaq_4689 NC_015062.1 248980 249486 D KEGG: dze:Dd1591_0090 hypothetical protein; hypothetical protein 248980..249486 Rahnella sp. Y9602 10215804 YP_004215397.1 CDS Rahaq_4690 NC_015062.1 249486 250307 D KEGG: ddd:Dda3937_00967 hydrolase; hydrolase 249486..250307 Rahnella sp. Y9602 10215805 YP_004215398.1 CDS Rahaq_4691 NC_015062.1 250291 251277 D PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; KEGG: dze:Dd1591_0089 3-oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein; 3-oxoacyl-ACP synthase 250291..251277 Rahnella sp. Y9602 10215806 YP_004215399.1 CDS Rahaq_4692 NC_015062.1 251319 252449 D PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: ddc:Dd586_0099 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 251319..252449 Rahnella sp. Y9602 10215807 YP_004215400.1 CDS Rahaq_4693 NC_015062.1 252436 253287 D KEGG: ddd:Dda3937_00958 hypothetical protein; hypothetical protein 252436..253287 Rahnella sp. Y9602 10215808 YP_004215401.1 CDS Rahaq_4694 NC_015062.1 253284 254228 D PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; KEGG: dze:Dd1591_0086 3-oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein; 3-oxoacyl-ACP synthase 253284..254228 Rahnella sp. Y9602 10215809 YP_004215402.1 CDS Rahaq_4695 NC_015062.1 254221 255537 D PFAM: cytochrome P450; KEGG: pla:Plav_0082 cytochrome P450; cytochrome P450 254221..255537 Rahnella sp. Y9602 10215810 YP_004215403.1 CDS Rahaq_4696 NC_015062.1 255521 256576 D PFAM: luciferase; KEGG: scl:sce2387 non-ribosomal peptide synthetase; luciferase 255521..256576 Rahnella sp. Y9602 10215811 YP_004215404.1 CDS Rahaq_4697 NC_015062.1 256592 257248 D KEGG: dze:Dd1591_0085 hypothetical protein; hypothetical protein 256592..257248 Rahnella sp. Y9602 10215812 YP_004215405.1 CDS Rahaq_4698 NC_015062.1 257258 257947 R PFAM: 4'-phosphopantetheinyl transferase; KEGG: ddc:Dd586_0095 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase complement(257258..257947) Rahnella sp. Y9602 10215813 YP_004215406.1 CDS Rahaq_4699 NC_015062.1 257904 259217 R KEGG: dda:Dd703_0098 histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; multi-sensor signal transduction histidine kinase complement(257904..259217) Rahnella sp. Y9602 10215814 YP_004215407.1 CDS Rahaq_4700 NC_015062.1 259210 260622 R KEGG: dda:Dd703_0097 two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; two component Fis family sigma54-specific transcriptional regulator complement(259210..260622) Rahnella sp. Y9602 10215815 YP_004215408.1 CDS Rahaq_4701 NC_015062.1 260670 263099 R KEGG: ddc:Dd586_0092 permease; TIGRFAM: permease; PFAM: protein of unknown function DUF214; permease complement(260670..263099) Rahnella sp. Y9602 10215816 YP_004215409.1 CDS Rahaq_4702 NC_015062.1 263101 263820 R KEGG: dze:Dd1591_0080 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(263101..263820) Rahnella sp. Y9602 10215817 YP_004215410.1 CDS Rahaq_4703 NC_015062.1 263876 265126 R KEGG: cps:CPS_2118 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(263876..265126) Rahnella sp. Y9602 10215818 YP_004215411.1 CDS Rahaq_4704 NC_015062.1 265557 266102 D KEGG: dze:Dd1591_0079 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 265557..266102 Rahnella sp. Y9602 10215819 YP_004215412.1 CDS Rahaq_4705 NC_015062.1 266106 267161 R PFAM: alpha/beta hydrolase fold; KEGG: ddc:Dd586_0089 hypothetical protein; alpha/beta hydrolase fold protein complement(266106..267161) Rahnella sp. Y9602 10215820 YP_004215413.1 CDS Rahaq_4706 NC_015062.1 267151 268503 R PFAM: multi antimicrobial extrusion protein MatE; KEGG: ddc:Dd586_0088 multi antimicrobial extrusion protein MatE; multi antimicrobial extrusion protein MatE complement(267151..268503) Rahnella sp. Y9602 10215821 YP_004215414.1 CDS Rahaq_4707 NC_015062.1 268500 269141 R KEGG: dze:Dd1591_0076 hypothetical protein; hypothetical protein complement(268500..269141) Rahnella sp. Y9602 10215822 YP_004215415.1 CDS Rahaq_4708 NC_015062.1 269134 269394 R KEGG: dze:Dd1591_0075 hypothetical protein; hypothetical protein complement(269134..269394) Rahnella sp. Y9602 10215823 YP_004215416.1 CDS Rahaq_4709 NC_015062.1 269369 270328 R PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; KEGG: dze:Dd1591_0074 3-oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein; 3-oxoacyl-ACP synthase complement(269369..270328) Rahnella sp. Y9602 10215824 YP_004215417.1 CDS Rahaq_4710 NC_015062.1 270510 272312 R KEGG: pct:PC1_0021 ABC transporter related; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter complement(270510..272312) Rahnella sp. Y9602 10215825 YP_004215418.1 CDS Rahaq_4711 NC_015062.1 272312 273229 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pwa:Pecwa_0020 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(272312..273229) Rahnella sp. Y9602 10215826 YP_004215419.1 CDS Rahaq_4712 NC_015062.1 273229 274203 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dda:Dd703_1444 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(273229..274203) Rahnella sp. Y9602 10215827 YP_004215420.1 CDS Rahaq_4713 NC_015062.1 274200 275162 R PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: dze:Dd1591_2617 inosine/uridine-preferring nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase complement(274200..275162) Rahnella sp. Y9602 10215828 YP_004215421.1 CDS Rahaq_4714 NC_015062.1 275167 276117 R PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: pwa:Pecwa_0017 ribosylpyrimidine nucleosidase; inosine/uridine-preferring nucleoside hydrolase complement(275167..276117) Rahnella sp. Y9602 10215829 YP_004215422.1 CDS Rahaq_4715 NC_015062.1 276114 276998 R PFAM: dihydrodipicolinate synthetase; KEGG: dda:Dd703_1441 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase complement(276114..276998) Rahnella sp. Y9602 10215830 YP_004215423.1 CDS Rahaq_4716 NC_015062.1 277092 278651 R PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA4426 extracellular solute-binding protein; family 5 extracellular solute-binding protein complement(277092..278651) Rahnella sp. Y9602 10215831 YP_004215424.1 CDS Rahaq_4717 NC_015062.1 278792 279679 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA4427 LysR family transcriptional regulator; LysR family transcriptional regulator 278792..279679 Rahnella sp. Y9602 10215832 YP_004215425.1 CDS Rahaq_4718 NC_015062.1 280077 282554 D TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone repeat-containing protein; KEGG: kpe:KPK_2398 quinate dehydrogenase (pyrroloquinoline-quinone); SMART: Pyrrolo-quinoline quinone beta-propeller repeat; membrane-bound PQQ-dependent dehydrogenase 280077..282554 Rahnella sp. Y9602 10215833 YP_004215426.1 CDS Rahaq_4719 NC_015062.1 282618 283913 R KEGG: tau:Tola_3115 HipA N-terminal domain protein; TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; HipA N-terminal domain-containing protein complement(282618..283913) Rahnella sp. Y9602 10215834 YP_004215427.1 CDS Rahaq_4720 NC_015062.1 283917 284168 R KEGG: spe:Spro_0567 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(283917..284168) Rahnella sp. Y9602 10215835 YP_004215428.1 CDS Rahaq_4721 NC_015062.1 284376 285086 D KEGG: pwa:Pecwa_4253 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain-containing protein; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 284376..285086 Rahnella sp. Y9602 10215836 YP_004215429.1 CDS Rahaq_4722 NC_015062.1 285097 286296 R PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pwa:Pecwa_4254 mandelate racemase/muconate lactonizing protein; mandelate racemase/muconate lactonizing protein complement(285097..286296) Rahnella sp. Y9602 10215837 YP_004215430.1 CDS Rahaq_4723 NC_015062.1 286606 288021 D manually curated; KEGG: pct:PC1_4064 phosphotransferase system EIIC; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; protein-N(pi)-phosphohistidine--sugar phosphotransferase 286606..288021 Rahnella sp. Y9602 10215838 YP_004215431.1 CDS Rahaq_4724 NC_015062.1 288028 288900 R KEGG: cko:CKO_03358 hypothetical protein; PFAM: fumarylacetoacetate (FAA) hydrolase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase complement(288028..288900) Rahnella sp. Y9602 10215839 YP_004215432.1 CDS Rahaq_4725 NC_015062.1 289059 289982 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mno:Mnod_8309 transcriptional regulator, LysR family; LysR family transcriptional regulator 289059..289982 Rahnella sp. Y9602 10215840 YP_004215433.1 CDS Rahaq_4726 NC_015062.1 290001 290966 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: kpu:KP1_3099 oligopeptide ABC transport system ATP-binding component; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(290001..290966) Rahnella sp. Y9602 10215841 YP_004215434.1 CDS Rahaq_4727 NC_015062.1 290963 291967 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: spe:Spro_2854 oligopeptide/dipeptide ABC transporter ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(290963..291967) Rahnella sp. Y9602 10215842 YP_004215435.1 CDS Rahaq_4728 NC_015062.1 291964 292911 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kva:Kvar_2274 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(291964..292911) Rahnella sp. Y9602 10215843 YP_004215436.1 CDS Rahaq_4729 NC_015062.1 292911 293870 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpn:KPN_02020 oligopeptide ABC transporter, permease; binding-protein-dependent transport system inner membrane protein complement(292911..293870) Rahnella sp. Y9602 10215844 YP_004215437.1 CDS Rahaq_4730 NC_015062.1 293922 295634 R PFAM: extracellular solute-binding protein family 5; KEGG: kva:Kvar_2276 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein complement(293922..295634) Rahnella sp. Y9602 10215845 YP_004215438.1 CDS Rahaq_4731 NC_015062.1 295933 296919 R PFAM: initiator RepB protein; KEGG: epy:EpC_pEp360280 plasmid replication protein; initiator RepB protein complement(295933..296919) Rahnella sp. Y9602 10215846 YP_004215439.1 CDS Rahaq_4732 NC_015062.1 298295 298504 R KEGG: epy:EpC_pEp360300 plasmid partitioning protein; plasmid partitioning protein complement(298295..298504) Rahnella sp. Y9602 10215847 YP_004215440.1 CDS Rahaq_4733 NC_015062.1 298501 299127 R KEGG: epy:EpC_pEp360310 plasmid partitioning protein; plasmid partitioning protein complement(298501..299127) Rahnella sp. Y9602 10215848 YP_004215441.1 CDS Rahaq_4734 NC_015062.1 300546 301631 R TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; KEGG: ypz:YPZ3_2477 ABC-transporter ATP-binding protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase complement(300546..301631) Rahnella sp. Y9602 10215849 YP_004215442.1 CDS Rahaq_4735 NC_015062.1 301882 303438 R KEGG: ypy:YPK_1334 transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(301882..303438) Rahnella sp. Y9602 10215850 YP_004215443.1 CDS Rahaq_4736 NC_015062.1 303585 304853 D KEGG: ypi:YpsIP31758_1218 4-aminobutyrate aminotransferase; TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; 4-aminobutyrate aminotransferase 303585..304853 Rahnella sp. Y9602 10215851 YP_004215444.1 CDS Rahaq_4737 NC_015062.1 305131 306159 D PFAM: extracellular solute-binding protein family 1; KEGG: pct:PC1_2230 extracellular solute-binding protein family 1; extracellular solute-binding protein 305131..306159 Rahnella sp. Y9602 10215852 YP_004215445.1 CDS Rahaq_4738 NC_015062.1 306330 307595 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_1220 spermidine/putrescine ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein 306330..307595 Rahnella sp. Y9602 10215853 YP_004215446.1 CDS Rahaq_4739 NC_015062.1 307607 308446 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypb:YPTS_2913 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 307607..308446 Rahnella sp. Y9602 10215854 YP_004215447.1 CDS Rahaq_4740 NC_015062.1 308535 309278 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pst:PSPTO_4082 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 308535..309278 Rahnella sp. Y9602 10215855 YP_004215448.1 CDS Rahaq_4741 NC_015062.1 309271 310320 D PFAM: aminoglycoside phosphotransferase; KEGG: eca:ECA2059 phosphotransferase; aminoglycoside phosphotransferase 309271..310320 Rahnella sp. Y9602 10215856 YP_004215449.1 CDS Rahaq_4742 NC_015062.1 310332 311591 D PFAM: aminotransferase class-III; KEGG: pct:PC1_2224 aminotransferase class-III; class III aminotransferase 310332..311591 Rahnella sp. Y9602 10215857 YP_004215450.1 CDS Rahaq_4743 NC_015062.1 311864 312988 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dda:Dd703_0577 diguanylate cyclase; SMART: GGDEF domain containing protein; diguanylate cyclase 311864..312988 Rahnella sp. Y9602 10215858 YP_004215451.1 CDS Rahaq_4744 NC_015062.1 313144 313890 R KEGG: pct:PC1_2179 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(313144..313890) Rahnella sp. Y9602 10215859 YP_004215452.1 CDS Rahaq_4745 NC_015062.1 313994 315451 R TIGRFAM: sugar transporter; KEGG: ebi:EbC_09090 probable metabolite transport protein; sugar transporter complement(313994..315451) Rahnella sp. Y9602 10215860 YP_004215453.1 CDS Rahaq_4746 NC_015062.1 315800 318175 D KEGG: enc:ECL_03864 anaerobic dimethyl sulfoxide reductase subunit A; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; anaerobic dimethyl sulfoxide reductase subunit A 315800..318175 Rahnella sp. Y9602 10215861 YP_004215454.1 CDS Rahaq_4747 NC_015062.1 318172 318792 D TIGRFAM: dimethylsulfoxide reductase, chain B; KEGG: sea:SeAg_B2681 dimethylsulfoxide reductase, chain B; dimethylsulfoxide reductase subunit B 318172..318792 Rahnella sp. Y9602 10215862 YP_004215455.1 CDS Rahaq_4748 NC_015062.1 318795 319640 D PFAM: DMSO reductase anchor subunit (DmsC); KEGG: cro:ROD_34421 anaerobic reductase component; DMSO reductase anchor subunit DmsC 318795..319640 Rahnella sp. Y9602 10215863 YP_004215456.1 CDS Rahaq_4749 NC_015062.1 319640 320521 D KEGG: cro:ROD_34431 polyferredoxin; polyferredoxin 319640..320521 Rahnella sp. Y9602 10215864 YP_004215457.1 CDS Rahaq_4750 NC_015062.1 320523 320711 D hypothetical protein 320523..320711 Rahnella sp. Y9602 10215865 YP_004215458.1 CDS Rahaq_4751 NC_015062.1 320719 321915 D KEGG: ebi:EbC_22580 short-chain alcohol dehydrogenase; PFAM: short-chain alcohol dehydrogenase; trans-2-enoyl-CoA reductase (NAD(+)) 320719..321915 Rahnella sp. Y9602 10215866 YP_004215459.1 CDS Rahaq_4752 NC_015062.1 322040 322342 R KEGG: esa:ESA_pESA3p05475 hypothetical protein; hypothetical protein complement(322040..322342) Rahnella sp. Y9602 10215867 YP_004215460.1 CDS Rahaq_4753 NC_015062.1 322556 322861 R KEGG: ebi:EbC_21450 hypothetical protein; hypothetical protein complement(322556..322861) Rahnella sp. Y9602 10215868 YP_004215461.1 CDS Rahaq_4754 NC_015062.1 323424 323531 D hypothetical protein 323424..323531 Rahnella sp. Y9602 10215869 YP_004215462.1 CDS Rahaq_4755 NC_015062.1 323506 324783 D KEGG: ent:Ent638_1785 sugar-specific permease, SgaT/UlaA; sugar-specific permease, SgaT/UlaA 323506..324783 Rahnella sp. Y9602 10215870 YP_004215463.1 CDS Rahaq_4756 NC_015062.1 324915 326300 R PFAM: aldehyde Dehydrogenase; KEGG: pfl:PFL_3831 aldehyde dehydrogenase family protein; aldehyde Dehydrogenase complement(324915..326300) Rahnella sp. Y9602 10215871 YP_004215464.1 CDS Rahaq_4757 NC_015062.1 326401 327285 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pst:PSPTO_2661 transcriptional regulator, LysR family; LysR family transcriptional regulator 326401..327285 Rahnella sp. Y9602 10215872 YP_004215465.1 CDS Rahaq_4758 NC_015062.1 327831 328238 D KEGG: pam:PANA_1291 Hns; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS 327831..328238 Rahnella sp. Y9602 10215873 YP_004215466.1 CDS Rahaq_4759 NC_015062.1 328451 328984 D KEGG: ddc:Dd586_3189 cytochrome b561; cytochrome b561 328451..328984 Rahnella sp. Y9602 10215874 YP_004215467.1 CDS Rahaq_4760 NC_015062.1 329147 329611 D KEGG: kva:Kvar_0973 hypothetical protein; hypothetical protein 329147..329611 Rahnella sp. Y9602 10215875 YP_004215468.1 CDS Rahaq_4761 NC_015062.1 329611 329940 D PFAM: protein of unknown function DUF1493; KEGG: spq:SPAB_03607 hypothetical protein; hypothetical protein 329611..329940 Rahnella sp. Y9602 10215876 YP_004215469.1 CDS Rahaq_4762 NC_015062.1 329963 330445 R KEGG: ses:SARI_00061 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; type VI secretion system effector complement(329963..330445) Rahnella sp. Y9602 10215877 YP_004215470.1 CDS Rahaq_4763 NC_015062.1 330627 331550 R TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: ebi:EbC_21390 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase complement(330627..331550) Rahnella sp. Y9602 10215878 YP_004215471.1 CDS Rahaq_4764 NC_015062.1 331707 332480 D PFAM: filamentation induced by cAMP protein Fic; KEGG: xne:XNC1_3841 restriction modification system DNA specificity domain:filamentation induced by cAMP protein Fic (fragment); filamentation induced by cAMP protein fic 331707..332480 Rahnella sp. Y9602 10215879 YP_004215472.1 CDS Rahaq_4765 NC_015062.1 332533 333555 R PFAM: inner-membrane translocator; KEGG: ent:Ent638_4073 inner-membrane translocator; inner-membrane translocator complement(332533..333555) Rahnella sp. Y9602 10215880 YP_004215473.1 CDS Rahaq_4766 NC_015062.1 333552 334565 R PFAM: inner-membrane translocator; KEGG: ent:Ent638_4072 inner-membrane translocator; inner-membrane translocator complement(333552..334565) Rahnella sp. Y9602 10215881 YP_004215474.1 CDS Rahaq_4767 NC_015062.1 334562 336076 R KEGG: kpu:KP1_0068 rhamnose ABC transport system ATP-binding component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(334562..336076) Rahnella sp. Y9602 10215882 YP_004215475.1 CDS Rahaq_4768 NC_015062.1 336145 337137 R TIGRFAM: rhamnose ABC transporter, periplasmic rhamnose-binding protein; KEGG: ent:Ent638_4070 rhamnose ABC transporter, periplasmic rhamnose-binding protein; rhamnose ABC transporter, periplasmic rhamnose-binding protein complement(336145..337137) Rahnella sp. Y9602 10215883 YP_004215476.1 CDS Rahaq_4769 NC_015062.1 337539 338363 D KEGG: ebi:EbC_20340 HTH-type transcriptional activator RhaS; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 337539..338363 Rahnella sp. Y9602 10215884 YP_004215477.1 CDS Rahaq_4770 NC_015062.1 338559 339998 D PFAM: aldehyde Dehydrogenase; KEGG: pct:PC1_4133 aldehyde dehydrogenase A; aldehyde Dehydrogenase 338559..339998 Rahnella sp. Y9602 10215885 YP_004215478.1 CDS Rahaq_4771 NC_015062.1 340070 340651 D PFAM: protein of unknown function DUF162; KEGG: bmj:BMULJ_05703 hypothetical protein; hypothetical protein 340070..340651 Rahnella sp. Y9602 10215886 YP_004215479.1 CDS Rahaq_4772 NC_015062.1 340793 341869 D KEGG: ddd:Dda3937_00950 hypothetical protein; hypothetical protein 340793..341869 Rahnella sp. Y9602 10215887 YP_004215480.1 CDS Rahaq_4774 NC_015062.1 342418 343881 D KEGG: kpn:KPN_03171 hypothetical protein; hypothetical protein 342418..343881 Rahnella sp. Y9602 10215889 YP_004215481.1 CDS Rahaq_4775 NC_015062.1 343881 344699 D KEGG: ent:Ent638_2907 hypothetical protein; hypothetical protein 343881..344699 Rahnella sp. Y9602 10215890 YP_004215482.1 CDS Rahaq_4776 NC_015062.1 344734 345492 R KEGG: ebi:EbC_08990 hypothetical protein; hypothetical protein complement(344734..345492) Rahnella sp. Y9602 10215891 YP_004215483.1 CDS Rahaq_4777 NC_015062.1 346280 348433 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ebi:EbC_12090 outer membrane receptor YncD; TonB-dependent receptor 346280..348433 Rahnella sp. Y9602 10215892 YP_004215484.1 CDS Rahaq_4778 NC_015062.1 348612 351011 D SMART: Pyrrolo-quinoline quinone beta-propeller repeat; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; KEGG: spe:Spro_3100 quinoprotein glucose dehydrogenase; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone repeat-containing protein; membrane-bound PQQ-dependent dehydrogenase 348612..351011 Rahnella sp. Y9602 10215893 YP_004215485.1 CDS Rahaq_4779 NC_015062.1 350981 351304 R PFAM: transferase hexapeptide repeat containing protein; KEGG: cko:CKO_03886 hypothetical protein; hypothetical protein complement(350981..351304) Rahnella sp. Y9602 10215894 YP_004215486.1 CDS Rahaq_4780 NC_015062.1 351285 352187 R KEGG: ebi:EbC_21500 transcriptional regulator, AraC family; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(351285..352187) Rahnella sp. Y9602 10215895 YP_004215487.1 CDS Rahaq_4781 NC_015062.1 352322 353065 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cak:Caul_2398 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 352322..353065 Rahnella sp. Y9602 10215896 YP_004215488.1 CDS Rahaq_4782 NC_015062.1 353083 353487 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ebi:EbC_21490 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase 353083..353487 Rahnella sp. Y9602 10215897 YP_004215489.1 CDS Rahaq_4783 NC_015062.1 353484 354467 D PFAM: saccharopine dehydrogenase; KEGG: ebi:EbC_21480 saccharopine dehydrogenase family protein; saccharopine dehydrogenase 353484..354467 Rahnella sp. Y9602 10215898 YP_004215490.1 CDS Rahaq_4784 NC_015062.1 354440 355231 R PFAM: LysR substrate-binding; KEGG: pfs:PFLU4233 LysR-family transcriptional regulator; LysR family transcriptional regulator complement(354440..355231) Rahnella sp. Y9602 10215899 YP_004215491.1 CDS Rahaq_4785 NC_015062.1 355396 356040 R KEGG: eca:ECA2924 lipoprotein; lipoprotein complement(355396..356040) Rahnella sp. Y9602 10215900 YP_004215492.1 CDS Rahaq_4786 NC_015062.1 356239 356478 R KEGG: pna:Pnap_4946 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1272; hypothetical protein complement(356239..356478) Rahnella sp. Y9602 10215901 YP_004215493.1 CDS Rahaq_4787 NC_015062.1 356691 357062 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mll3207 hypothetical protein; Glyoxalase/bleomycin resistance protein/dioxygenase complement(356691..357062) Rahnella sp. Y9602 10215902 YP_004215494.1 CDS Rahaq_4788 NC_015062.1 357160 357849 R KEGG: hch:HCH_02020 transcriptional regulator; transcriptional regulator complement(357160..357849) Rahnella sp. Y9602 10215903 YP_004215495.1 CDS Rahaq_4789 NC_015062.1 357889 359310 R PFAM: major facilitator superfamily MFS_1; KEGG: esa:ESA_02053 hypothetical protein; major facilitator superfamily protein complement(357889..359310) Rahnella sp. Y9602 10215904 YP_004215496.1 CDS Rahaq_4790 NC_015062.1 359445 360350 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2417 LysR family transcriptional regulator; LysR family transcriptional regulator 359445..360350 Rahnella sp. Y9602 10215905 YP_004215497.1 CDS Rahaq_4791 NC_015062.1 360355 361017 R KEGG: esa:ESA_01397 exodeoxyribonuclease X; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; exonuclease RNase T and DNA polymerase III complement(360355..361017) Rahnella sp. Y9602 10215906 YP_004215498.1 CDS Rahaq_4792 NC_015062.1 361406 362560 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: cro:ROD_22211 mandelate racemase/muconate lactonising enzyme; mandelate racemase/muconate lactonizing protein 361406..362560 Rahnella sp. Y9602 10215907 YP_004215499.1 CDS Rahaq_4793 NC_015062.1 362612 364255 D PFAM: extracellular solute-binding protein family 5; KEGG: ent:Ent638_2706 extracellular solute-binding protein; family 5 extracellular solute-binding protein 362612..364255 Rahnella sp. Y9602 10215908 YP_004215500.1 CDS Rahaq_4794 NC_015062.1 364252 365313 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ent:Ent638_2705 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 364252..365313 Rahnella sp. Y9602 10215909 YP_004215501.1 CDS Rahaq_4795 NC_015062.1 365310 366215 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ent:Ent638_2704 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 365310..366215 Rahnella sp. Y9602 10215910 YP_004215502.1 CDS Rahaq_4796 NC_015062.1 366187 367053 D KEGG: kpu:KP1_3752 dipeptide ABC transport system ATP-binding component; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter 366187..367053 Rahnella sp. Y9602 10215911 YP_004215503.1 CDS Rahaq_4797 NC_015062.1 367063 367848 D KEGG: kpe:KPK_1631 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 367063..367848 Rahnella sp. Y9602 10215912 YP_004215504.1 CDS Rahaq_4798 NC_015062.1 367893 368978 R KEGG: ebi:EbC_39410 conserved uncharacterized protein; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; type VI secretion protein complement(367893..368978) Rahnella sp. Y9602 10215913 YP_004215505.1 CDS Rahaq_4799 NC_015062.1 368942 370717 R KEGG: ebi:EbC_39400 type VI secretion protein, VCA0110 family; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; type VI secretion protein complement(368942..370717) Rahnella sp. Y9602 10215914 YP_004215506.1 CDS Rahaq_4800 NC_015062.1 370717 371250 R TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: ses:SARI_02713 hypothetical protein; type VI secretion lipoprotein complement(370717..371250) Rahnella sp. Y9602 10215915 YP_004215507.1 CDS Rahaq_4801 NC_015062.1 371237 374605 R PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: pay:PAU_03820 hypothetical protein; ImcF domain-containing protein complement(371237..374605) Rahnella sp. Y9602 10215916 YP_004215508.1 CDS Rahaq_4802 NC_015062.1 374598 376010 R KEGG: rme:Rmet_0632 hypothetical protein; hypothetical protein complement(374598..376010) Rahnella sp. Y9602 10215917 YP_004215509.1 CDS Rahaq_4803 NC_015062.1 376010 376264 R KEGG: kpn:KPN_02253 hypothetical protein; hypothetical protein complement(376010..376264) Rahnella sp. Y9602 10215918 YP_004215510.1 CDS Rahaq_4804 NC_015062.1 376288 376758 R KEGG: tva:TVAG_339120 Dopey, N-terminal domain containing protein; hypothetical protein complement(376288..376758) Rahnella sp. Y9602 10215919 YP_004215511.1 CDS Rahaq_4805 NC_015062.1 376768 377517 R KEGG: aas:Aasi_0854 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein repeat-containing protein complement(376768..377517) Rahnella sp. Y9602 10215920 YP_004215512.1 CDS Rahaq_4806 NC_015062.1 377584 378333 R KEGG: rso:RSc1943 hypothetical protein; hypothetical protein complement(377584..378333) Rahnella sp. Y9602 10215921 YP_004215513.1 CDS Rahaq_4807 NC_015062.1 378344 380506 R KEGG: azo:azo2942 hypothetical protein; hypothetical protein complement(378344..380506) Rahnella sp. Y9602 10215922 YP_004215514.1 CDS Rahaq_4808 NC_015062.1 380509 383016 R KEGG: ebi:EbC_39330 type VI secretion system, rhs element Vgr protein; TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; PFAM: Protein of unknown function DUF2345; Rhs element Vgr protein complement(380509..383016) Rahnella sp. Y9602 10215923 YP_004215515.1 CDS Rahaq_4809 NC_015062.1 383451 384431 D KEGG: cby:CLM_2337 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; GCN5-related N-acetyltransferase; SMART: regulatory protein MarR; MarR family transcriptional regulator 383451..384431 Rahnella sp. Y9602 10215924 YP_004215516.1 CDS Rahaq_4810 NC_015062.1 384448 386235 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pwa:Pecwa_1824 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(384448..386235) Rahnella sp. Y9602 10215925 YP_004215517.1 CDS Rahaq_4811 NC_015062.1 386235 387743 R PFAM: extracellular solute-binding protein family 5; KEGG: pct:PC1_1425 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein complement(386235..387743) Rahnella sp. Y9602 10215926 YP_004215518.1 CDS Rahaq_4812 NC_015062.1 387757 388995 R PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_1426 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(387757..388995) Rahnella sp. Y9602 10215927 YP_004215519.1 CDS Rahaq_4813 NC_015062.1 389000 389815 R KEGG: eca:ECA1551 ABC transporter ATP binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(389000..389815) Rahnella sp. Y9602 10215928 YP_004215520.1 CDS Rahaq_4814 NC_015062.1 389815 390633 R KEGG: pct:PC1_1428 ABC transporter related; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter complement(389815..390633) Rahnella sp. Y9602 10215929 YP_004215521.1 CDS Rahaq_4815 NC_015062.1 390891 391946 R TIGRFAM: D-fructose-responsive transcription factor; PFAM: regulatory protein LacI; KEGG: ctu:Ctu_04450 sucrose operon repressor; SMART: regulatory protein LacI; LacI family transcriptional regulator complement(390891..391946) Rahnella sp. Y9602 10215930 YP_004215522.1 CDS Rahaq_4816 NC_015062.1 391947 393356 R TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32 domain protein; KEGG: eca:ECA0361 sucrose-6-phosphate hydrolase; SMART: glycoside hydrolase family 32; sucrose-6-phosphate hydrolase complement(391947..393356) Rahnella sp. Y9602 10215931 YP_004215523.1 CDS Rahaq_4817 NC_015062.1 393353 394726 R TIGRFAM: PTS system, sucrose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PTS system, maltose and glucose-specific subfamily, IIC subunit; KEGG: yen:YE0552 PTS system, sucrose-specific IIBC component; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; PTS system sucrose-specific transporter subunit IIBC complement(393353..394726) Rahnella sp. Y9602 10215932 YP_004215524.1 CDS Rahaq_4818 NC_015062.1 394802 396382 R PFAM: porin LamB type; KEGG: yen:YE0553 sucrose porin; LamB type porin complement(394802..396382) Rahnella sp. Y9602 10215933 YP_004215525.1 CDS Rahaq_4819 NC_015062.1 396633 397571 D PFAM: PfkB domain protein; KEGG: ecp:ECP_2750 aminoimidazole riboside kinase; PfkB domain-containing protein 396633..397571 Rahnella sp. Y9602 10215934 YP_004215526.1 CDS Rahaq_4820 NC_015062.1 397786 400209 D KEGG: sgl:SG1935 outer membrane protein assembly factor YaeT; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; outer membrane protein assembly complex, YaeT protein 397786..400209 Rahnella sp. Y9602 10215935 YP_004215527.1 CDS Rahaq_4821 NC_015062.1 400421 400807 R PFAM: Methionine sulfoxide reductase B; KEGG: slo:Shew_1591 bifunctional methionine sulfoxide reductase B/A protein; methionine sulfoxide reductase B complement(400421..400807) Rahnella sp. Y9602 10215936 YP_004215528.1 CDS Rahaq_4822 NC_015062.1 400903 402276 R KEGG: enc:ECL_00053 multidrug efflux transport outer membrane protein EefC; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein complement(400903..402276) Rahnella sp. Y9602 10215937 YP_004215529.1 CDS Rahaq_4823 NC_015062.1 402273 405389 R KEGG: kpn:KPN_04040 acridine efflux pump; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(402273..405389) Rahnella sp. Y9602 10215938 YP_004215530.1 CDS Rahaq_4824 NC_015062.1 405389 406528 R KEGG: kva:Kvar_0061 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(405389..406528) Rahnella sp. Y9602 10215939 YP_004215531.1 CDS Rahaq_4825 NC_015062.1 406655 407146 R PFAM: transcriptional regulator PadR family protein; KEGG: ccs:CCNA_03805 transcriptional regulator; PadR family transcriptional regulator complement(406655..407146) Rahnella sp. Y9602 10215940 YP_004215532.1 CDS Rahaq_4826 NC_015062.1 407418 407999 R PFAM: protein of unknown function DUF330; KEGG: mei:Msip34_1971 protein of unknown function DUF330; hypothetical protein complement(407418..407999) Rahnella sp. Y9602 10215941 YP_004215533.1 CDS Rahaq_4827 NC_015062.1 407996 409591 R PFAM: hypothetical protein; KEGG: pct:PC1_1445 mammalian cell entry related domain protein; hypothetical protein complement(407996..409591) Rahnella sp. Y9602 10215942 YP_004215534.1 CDS Rahaq_4828 NC_015062.1 409584 410207 R PFAM: Paraquat-inducible protein A; KEGG: mei:Msip34_1973 paraquat-inducible protein A; paraquat-inducible protein A complement(409584..410207) Rahnella sp. Y9602 10215943 YP_004215535.1 CDS Rahaq_4829 NC_015062.1 410204 410821 R PFAM: Paraquat-inducible protein A; KEGG: mei:Msip34_1974 paraquat-inducible protein A; Paraquat-inducible protein A complement(410204..410821) Rahnella sp. Y9602 10215944 YP_004215536.1 CDS Rahaq_4830 NC_015062.1 410848 411510 R KEGG: ddd:Dda3937_00082 lipoprotein; lipoprotein complement(410848..411510) Rahnella sp. Y9602 10215945 YP_004215537.1 CDS Rahaq_4831 NC_015062.1 411718 414138 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ebi:EbC_37650 TonB-dependent outer membrane receptor; TonB-dependent receptor complement(411718..414138) Rahnella sp. Y9602 10215946 YP_004215538.1 CDS Rahaq_4832 NC_015062.1 414477 415088 D PFAM: regulatory protein TetR; KEGG: epy:EpC_18270 TetR-family transcriptional regulator; TetR family transcriptional regulator 414477..415088 Rahnella sp. Y9602 10215947 YP_004215539.1 CDS Rahaq_4833 NC_015062.1 415227 416039 D PFAM: FAD-binding 9 siderophore-interacting domain protein; Siderophore-interacting protein; KEGG: efe:EFER_3022 siderophore interacting protein; FAD-binding 9 siderophore-interacting domain-containing protein 415227..416039 Rahnella sp. Y9602 10215948 YP_004215540.1 CDS Rahaq_4834 NC_015062.1 416045 416524 D KEGG: ebi:EbC_22520 transcriptional regulator, PadR family; manually curated; PFAM: transcriptional regulator PadR family protein; PadR family transcriptional regulator 416045..416524 Rahnella sp. Y9602 10215949 YP_004215541.1 CDS Rahaq_4835 NC_015062.1 416580 417380 R KEGG: mms:mma_0791 methionyl aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; methionine aminopeptidase complement(416580..417380) Rahnella sp. Y9602 10215950 YP_004215542.1 CDS Rahaq_4836 NC_015062.1 417373 417627 R KEGG: pna:Pnap_4817 hypothetical protein; hypothetical protein complement(417373..417627) Rahnella sp. Y9602 10215951 YP_004215543.1 CDS Rahaq_4837 NC_015062.1 417787 418176 D KEGG: ebi:EbC_15870 conserved uncharacterized protein; hypothetical protein 417787..418176 Rahnella sp. Y9602 10215952 YP_004215544.1 CDS Rahaq_4838 NC_015062.1 418278 418544 R TIGRFAM: pentapeptide MXKDX repeat protein; KEGG: dac:Daci_3133 pentapeptide MXKDX repeat-containing protein; pentapeptide MXKDX repeat-containing protein complement(418278..418544) Rahnella sp. Y9602 10215953 YP_004215545.1 CDS Rahaq_4839 NC_015062.1 418596 419399 R PFAM: oxidoreductase molybdopterin binding; KEGG: spe:Spro_1510 oxidoreductase molybdopterin binding; oxidoreductase molybdopterin binding protein complement(418596..419399) Rahnella sp. Y9602 10215954 YP_004215546.1 CDS Rahaq_4840 NC_015062.1 419410 420036 R KEGG: spe:Spro_1509 thiosulfate reductase cytochrome b subunit (membrane anchoring protein); thiosulfate reductase cytochrome b subunit (membrane anchoring protein) complement(419410..420036) Rahnella sp. Y9602 10215955 YP_004215547.1 CDS Rahaq_4841 NC_015062.1 420191 420913 D KEGG: spe:Spro_1508 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 420191..420913 Rahnella sp. Y9602 10215956 YP_004215548.1 CDS Rahaq_4842 NC_015062.1 420917 422383 D KEGG: spe:Spro_1507 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 420917..422383 Rahnella sp. Y9602 10215957 YP_004215549.1 CDS Rahaq_4843 NC_015062.1 422630 424129 D PFAM: carboxylyase; KEGG: enc:ECL_01944 3,4-dihydroxybenzoate decarboxylase; carboxylyase 422630..424129 Rahnella sp. Y9602 10215958 YP_004215550.1 CDS Rahaq_4844 NC_015062.1 424325 425179 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pca:Pcar_2176 LysR family transcriptional regulator; LysR family transcriptional regulator 424325..425179 Rahnella sp. Y9602 10215959 YP_004215551.1 CDS Rahaq_4845 NC_015062.1 425295 425615 D PFAM: small multidrug resistance protein; KEGG: pap:PSPA7_3404 transporter; small multidrug resistance protein 425295..425615 Rahnella sp. Y9602 10215960 YP_004215552.1 CDS Rahaq_4846 NC_015062.1 425675 426148 R KEGG: spe:Spro_3692 transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(425675..426148) Rahnella sp. Y9602 10215961 YP_004215553.1 CDS Rahaq_4847 NC_015062.1 426145 427494 R PFAM: HipA domain protein; KEGG: spe:Spro_3691 HipA domain-containing protein; HipA domain-containing protein complement(426145..427494) Rahnella sp. Y9602 10215962 YP_004215554.1 CDS Rahaq_4848 NC_015062.1 427690 427911 R PFAM: protein of unknown function DUF1471; KEGG: pwa:Pecwa_2131 protein of unknown function DUF1471; hypothetical protein complement(427690..427911) Rahnella sp. Y9602 10215963 YP_004215555.1 CDS Rahaq_4849 NC_015062.1 428079 429209 R PFAM: protein of unknown function DUF1008; KEGG: yen:YE0333 hypothetical protein; hypothetical protein complement(428079..429209) Rahnella sp. Y9602 10215964 YP_004215556.1 CDS Rahaq_4850 NC_015062.1 429196 430521 R KEGG: eic:NT01EI_1913 coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein complement(429196..430521) Rahnella sp. Y9602 10215965 YP_004215557.1 CDS Rahaq_4851 NC_015062.1 430634 431008 R KEGG: sei:SPC_1747 hypothetical protein; hypothetical protein complement(430634..431008) Rahnella sp. Y9602 10215966 YP_004215558.1 CDS Rahaq_4852 NC_015062.1 431387 431605 D PFAM: protein of unknown function DUF903; KEGG: ebi:EbC_44280 lipoprotein; hypothetical protein 431387..431605 Rahnella sp. Y9602 10215967 YP_004215559.1 CDS Rahaq_4854 NC_015062.1 432393 433556 D PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: eca:ECA0119 L-lactate dehydrogenase; FMN-dependent alpha-hydroxy acid dehydrogenase 432393..433556 Rahnella sp. Y9602 10215969 YP_004215560.1 CDS Rahaq_4855 NC_015062.1 433601 434728 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: seg:SG1195 predicted phage protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(433601..434728) Rahnella sp. Y9602 10215970 YP_004215561.1 CDS Rahaq_4856 NC_015062.1 434841 437033 R KEGG: epy:EpC_05760 coenzyme PQQ synthesis protein F (pyrroloquinoline quinone biosynthesis protein F); TIGRFAM: coenzyme PQQ biosynthesis protein PqqF; PFAM: peptidase M16 domain protein; coenzyme PQQ biosynthesis protein PqqF complement(434841..437033) Rahnella sp. Y9602 10215971 YP_004215562.1 CDS Rahaq_4857 NC_015062.1 437041 438174 R TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; KEGG: eta:ETA_28860 pyrroloquinoline quinone biosynthesis protein PqqE; SMART: Elongator protein 3/MiaB/NifB; coenzyme PQQ biosynthesis protein E complement(437041..438174) Rahnella sp. Y9602 10215972 YP_004215563.1 CDS Rahaq_4858 NC_015062.1 438161 438448 R KEGG: ebi:EbC_37740 pyrroloquinoline quinone biosynthesis protein D; pyrroloquinoline quinone biosynthesis protein D complement(438161..438448) Rahnella sp. Y9602 10215973 YP_004215564.1 CDS Rahaq_4859 NC_015062.1 438445 439212 R PFAM: TENA/THI-4 domain-containing protein; manually curated; KEGG: ebi:EbC_37730 pyrroloquinoline quinone biosynthesis protein C; TIGRFAM: coenzyme PQQ biosynthesis protein C; coenzyme PQQ biosynthesis protein C complement(438445..439212) Rahnella sp. Y9602 10215974 YP_004215565.1 CDS Rahaq_4860 NC_015062.1 439224 440135 R TIGRFAM: coenzyme PQQ biosynthesis protein B; KEGG: ebi:EbC_37720 pyrroloquinoline quinone biosynthesis protein B; coenzyme PQQ biosynthesis protein B complement(439224..440135) Rahnella sp. Y9602 10215975 YP_004215566.1 CDS Rahaq_4861 NC_015062.1 440194 440265 R manually curated; TIGRFAM: coenzyme PQQ biosynthesis protein A; KEGG: cps:CPS_0862 coenzyme PQQ biosynthesis protein A; PFAM: coenzyme PQQ biosynthesis protein A; coenzyme PQQ biosynthesis protein A complement(440194..440265) Rahnella sp. Y9602 10215976 YP_004215567.1 CDS Rahaq_4862 NC_015062.1 440436 441473 R KEGG: ebi:EbC_37710 Zn-dependent dipeptidase; PFAM: peptidase M19 renal dipeptidase; membrane dipeptidase complement(440436..441473) Rahnella sp. Y9602 10215977 YP_004215568.1 CDS Rahaq_4863 NC_015062.1 441748 443973 R KEGG: ebi:EbC_11400 FhuE receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; TonB-dependent siderophore receptor complement(441748..443973) Rahnella sp. Y9602 10215978 YP_004215569.1 CDS Rahaq_4864 NC_015062.1 444660 445562 D PFAM: homocysteine S-methyltransferase; KEGG: dze:Dd1591_3747 homocysteine S-methyltransferase; homocysteine S-methyltransferase 444660..445562 Rahnella sp. Y9602 10215979 YP_004215570.1 CDS Rahaq_4865 NC_015062.1 445629 447173 D PFAM: extracellular solute-binding protein family 5; KEGG: ddd:Dda3937_01275 ABC transporter periplasmic binding-protein; family 5 extracellular solute-binding protein 445629..447173 Rahnella sp. Y9602 10215980 YP_004215571.1 CDS Rahaq_4866 NC_015062.1 447187 448206 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddd:Dda3937_01276 ABC transporter permease; binding-protein-dependent transport system inner membrane protein 447187..448206 Rahnella sp. Y9602 10215981 YP_004215572.1 CDS Rahaq_4867 NC_015062.1 448225 449040 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dze:Dd1591_3744 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 448225..449040 Rahnella sp. Y9602 10215982 YP_004215573.1 CDS Rahaq_4868 NC_015062.1 449037 450626 D KEGG: ddc:Dd586_0365 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 449037..450626 Rahnella sp. Y9602 10215983 YP_004215574.1 CDS Rahaq_4869 NC_015062.1 450863 452527 D KEGG: ebi:EbC_38940 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 450863..452527 Rahnella sp. Y9602 10215984 YP_004215575.1 CDS Rahaq_4870 NC_015062.1 452653 453540 D KEGG: cro:ROD_12321 beta-lactamase; PFAM: beta-lactamase; beta-lactamase 452653..453540 Rahnella sp. Y9602 10215985 YP_004215576.1 CDS Rahaq_4871 NC_015062.1 453679 454056 D KEGG: ppw:PputW619_2062 hypothetical protein; hypothetical protein 453679..454056 Rahnella sp. Y9602 10215986 YP_004215577.1 CDS Rahaq_4872 NC_015062.1 454614 455996 D KEGG: pwa:Pecwa_2355 diaminobutyrate--2-oxoglutarate aminotransferase; TIGRFAM: 2,4-diaminobutyrate 4-transaminase; PFAM: aminotransferase class-III; 2,4-diaminobutyrate 4-transaminase 454614..455996 Rahnella sp. Y9602 10215987 YP_004215578.1 CDS Rahaq_4873 NC_015062.1 456015 457487 D PFAM: Pyridoxal-dependent decarboxylase; KEGG: spe:Spro_2418 pyridoxal-dependent decarboxylase; pyridoxal-dependent decarboxylase 456015..457487 Rahnella sp. Y9602 10215988 YP_004215579.1 CDS Rahaq_4874 NC_015062.1 458142 459218 D PFAM: MscS Mechanosensitive ion channel; KEGG: enc:ECL_02262 inner membrane protein; mechanosensitive ion channel protein MscS 458142..459218 Rahnella sp. Y9602 10215989 YP_004215580.1 CDS Rahaq_4875 NC_015062.1 459215 461725 R TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; KEGG: esa:ESA_pESA3p05541 hypothetical protein; SMART: alpha amylase catalytic sub domain; malto-oligosyltrehalose synthase complement(459215..461725) Rahnella sp. Y9602 10215990 YP_004215581.1 CDS Rahaq_4876 NC_015062.1 461722 463509 R TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; KEGG: ctu:Ctu_1p00990 malto-oligosyltrehalose trehalohydrolase; SMART: alpha amylase catalytic sub domain; malto-oligosyltrehalose trehalohydrolase complement(461722..463509) Rahnella sp. Y9602 10215991 YP_004215582.1 CDS Rahaq_4877 NC_015062.1 463654 463845 R KEGG: dth:DICTH_0353 GGDEF domain protein; hypothetical protein complement(463654..463845) Rahnella sp. Y9602 10215992 YP_004215583.1 CDS Rahaq_4878 NC_015062.1 464150 465256 D PFAM: periplasmic binding protein; KEGG: spe:Spro_2539 periplasmic binding protein; periplasmic binding protein 464150..465256 Rahnella sp. Y9602 10215993 YP_004215584.1 CDS Rahaq_4879 NC_015062.1 465323 465925 R PFAM: Glutathione S-transferase domain; KEGG: spe:Spro_0989 glutathione S-transferase domain-containing protein; glutathione S-transferase complement(465323..465925) Rahnella sp. Y9602 10215994 YP_004215585.1 CDS Rahaq_4880 NC_015062.1 465930 466781 R PFAM: alpha/beta hydrolase fold; KEGG: spe:Spro_0990 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(465930..466781) Rahnella sp. Y9602 10215995 YP_004215586.1 CDS Rahaq_4881 NC_015062.1 466883 467779 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_0991 LysR family transcriptional regulator; LysR family transcriptional regulator 466883..467779 Rahnella sp. Y9602 10215996 YP_004215587.1 CDS Rahaq_4882 NC_015062.1 468013 469701 D KEGG: ses:SARI_00739 hypothetical protein; PFAM: 5TM Receptors of the LytS-YhcK type transmembrane region; GAF domain protein; histidine kinase internal region; ATP-binding region ATPase domain protein; SMART: GAF domain protein; ATP-binding region ATPase domain protein; signal transduction histidine kinase LytS 468013..469701 Rahnella sp. Y9602 10215997 YP_004215588.1 CDS Rahaq_4883 NC_015062.1 469695 470414 D KEGG: kpu:KP1_3786 two-component response-regulatory protein YehT; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; LytTR family two component transcriptional regulator 469695..470414 Rahnella sp. Y9602 10215998 YP_004215589.1 CDS Rahaq_4884 NC_015062.1 470445 471416 R PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: kva:Kvar_4482 cobalamin synthesis protein P47K; cobalamin synthesis protein P47K complement(470445..471416) Rahnella sp. Y9602 10215999 YP_004215590.1 CDS Rahaq_4885 NC_015062.1 471430 471633 R PFAM: protein of unknown function DUF466; KEGG: eta:ETA_04980 cytoplasmic protein; hypothetical protein complement(471430..471633) Rahnella sp. Y9602 10216000 YP_004215591.1 CDS Rahaq_4886 NC_015062.1 471694 473847 R PFAM: carbon starvation protein CstA; KEGG: ses:SARI_03048 hypothetical protein; carbon starvation protein CstA complement(471694..473847) Rahnella sp. Y9602 10216001 YP_004215592.1 CDS Rahaq_4887 NC_015062.1 474216 475652 D PFAM: glycoside hydrolase family 1; KEGG: pct:PC1_1461 glycoside hydrolase family 1; glycoside hydrolase 474216..475652 Rahnella sp. Y9602 10216002 YP_004215593.1 CDS Rahaq_4888 NC_015062.1 475821 477083 R KEGG: kva:Kvar_3166 DNA-directed DNA polymerase; PFAM: UMUC domain protein DNA-repair protein; DNA-directed DNA polymerase complement(475821..477083) Rahnella sp. Y9602 10216003 YP_004215594.1 CDS Rahaq_4889 NC_015062.1 477086 477505 R PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: kva:Kvar_3165 peptidase S24/S26A/S26B, conserved region; peptidase S24/S26A/S26B complement(477086..477505) Rahnella sp. Y9602 10216004 YP_004215595.1 CDS Rahaq_4890 NC_015062.1 477752 478765 R KEGG: ctu:Ctu_1p00740 hypothetical protein; hypothetical protein complement(477752..478765) Rahnella sp. Y9602 10216005 YP_004215596.1 CDS Rahaq_4891 NC_015062.1 478965 479804 R KEGG: ddc:Dd586_2905 hypothetical protein; hypothetical protein complement(478965..479804) Rahnella sp. Y9602 10216006 YP_004215597.1 CDS Rahaq_4892 NC_015062.1 479838 480557 R KEGG: ddc:Dd586_2906 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(479838..480557) Rahnella sp. Y9602 10216007 YP_004215598.1 CDS Rahaq_4893 NC_015062.1 480554 481333 R KEGG: ddc:Dd586_2907 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(480554..481333) Rahnella sp. Y9602 10216008 YP_004215599.1 CDS Rahaq_4894 NC_015062.1 481330 482217 R PFAM: inner-membrane translocator; KEGG: ddc:Dd586_2908 inner-membrane translocator; inner-membrane translocator complement(481330..482217) Rahnella sp. Y9602 10216009 YP_004215600.1 CDS Rahaq_4895 NC_015062.1 482210 483103 R PFAM: inner-membrane translocator; KEGG: ddc:Dd586_2909 inner-membrane translocator; inner-membrane translocator complement(482210..483103) Rahnella sp. Y9602 10216010 YP_004215601.1 CDS Rahaq_4896 NC_015062.1 483152 484279 R PFAM: Extracellular ligand-binding receptor; KEGG: ddc:Dd586_2910 extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(483152..484279) Rahnella sp. Y9602 10216011 YP_004215602.1 CDS Rahaq_4897 NC_015062.1 484814 485515 D KEGG: ddc:Dd586_2911 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 484814..485515 Rahnella sp. Y9602 10216012 YP_004215603.1 CDS Rahaq_4898 NC_015062.1 485637 486815 D TIGRFAM: amidohydrolase; KEGG: ddc:Dd586_2912 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 485637..486815 Rahnella sp. Y9602 10216013 YP_004215604.1 CDS Rahaq_4899 NC_015062.1 486818 487621 D TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: ddc:Dd586_2913 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; pyrroline-5-carboxylate reductase 486818..487621 Rahnella sp. Y9602 10216014 YP_004215605.1 CDS Rahaq_4900 NC_015062.1 487752 488858 R PFAM: ABC transporter; KEGG: ent:Ent638_1283 ABC transporter; ABC transporter complement(487752..488858) Rahnella sp. Y9602 10216015 YP_004215606.1 CDS Rahaq_4901 NC_015062.1 488868 490004 R PFAM: ABC transporter; KEGG: kva:Kvar_3560 ABC transporter; ABC transporter complement(488868..490004) Rahnella sp. Y9602 10216016 YP_004215607.1 CDS Rahaq_4902 NC_015062.1 489997 491742 R KEGG: sea:SeAg_B0852 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(489997..491742) Rahnella sp. Y9602 10216017 YP_004215608.1 CDS Rahaq_4903 NC_015062.1 491729 492733 R PFAM: secretion protein HlyD family protein; KEGG: enc:ECL_02940 HlyD family secretion protein; secretion protein HlyD family protein complement(491729..492733) Rahnella sp. Y9602 10216018 YP_004215609.1 CDS Rahaq_4904 NC_015062.1 492747 493418 R PFAM: TetR family transcriptional regulator ; regulatory protein TetR; KEGG: enc:ECL_02939 DNA-binding transcriptional regulator; TetR family transcriptional regulator complement(492747..493418) Rahnella sp. Y9602 10216019 YP_004215610.1 CDS Rahaq_4906 NC_015062.1 493943 495103 D PFAM: iron-containing alcohol dehydrogenase; KEGG: asu:Asuc_0403 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 493943..495103 Rahnella sp. Y9602 10216021 YP_004215611.1 CDS Rahaq_4909 NC_015062.1 496169 496615 R PFAM: protein of unknown function DUF1486; KEGG: ebi:EbC_26010 hypothetical protein; hypothetical protein complement(496169..496615) Rahnella sp. Y9602 10216024 YP_004215612.1 CDS Rahaq_4910 NC_015062.1 496734 497648 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebi:EbC_26020 transcriptional regulator, LysR family; LysR family transcriptional regulator 496734..497648 Rahnella sp. Y9602 10216025 YP_004215613.1 CDS Rahaq_4911 NC_015062.1 497738 498598 R PFAM: aldo/keto reductase; KEGG: kpn:KPN_03272 aldo/keto reductase; aldo/keto reductase complement(497738..498598) Rahnella sp. Y9602 10216026 YP_004215614.1 CDS Rahaq_4912 NC_015062.1 498735 499091 R PFAM: protein of unknown function DUF1493; KEGG: yen:YE2290 phage-associated acyl carrier protein; hypothetical protein complement(498735..499091) Rahnella sp. Y9602 10216027 YP_004215615.1 CDS Rahaq_4913 NC_015062.1 499078 500160 R PFAM: glycosyl transferase family 9; KEGG: epy:EpC_00900 glycosyl transferase, family 9; glycosyl transferase family protein complement(499078..500160) Rahnella sp. Y9602 10216028 YP_004215616.1 CDS Rahaq_4914 NC_015062.1 500238 501257 R PFAM: glycosyl transferase family 9; KEGG: tye:THEYE_A0426 glycosyl transferase, family 9; glycosyl transferase family protein complement(500238..501257) Rahnella sp. Y9602 10216029 YP_004215617.1 CDS Rahaq_4915 NC_015062.1 501609 502580 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebi:EbC_12050 transcriptional regulator, LysR family; LysR family transcriptional regulator 501609..502580 Rahnella sp. Y9602 10216030 YP_004215618.1 CDS Rahaq_4916 NC_015062.1 502585 503160 R PFAM: protein of unknown function DUF204; KEGG: epy:EpC_35850 hypothetical protein; hypothetical protein complement(502585..503160) Rahnella sp. Y9602 10216031 YP_004215619.1 CDS Rahaq_4917 NC_015062.1 503886 504365 D KEGG: pay:PAU_02282 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: Uncharacterised conserved protein UCP028301; type VI secretion protein 503886..504365 Rahnella sp. Y9602 10216032 YP_004215620.1 CDS Rahaq_4918 NC_015062.1 504362 505843 D KEGG: pay:PAU_02281 hypothetical protein; TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; type VI secretion protein EvpB 504362..505843 Rahnella sp. Y9602 10216033 YP_004215621.1 CDS Rahaq_4919 NC_015062.1 505873 506364 D PFAM: protein of unknown function DUF796; KEGG: pay:PAU_02280 hypothetical protein; hypothetical protein 505873..506364 Rahnella sp. Y9602 10216034 YP_004215622.1 CDS Rahaq_4920 NC_015062.1 506417 506833 D PFAM: GPW/gp25 family protein; KEGG: pay:PAU_02279 hypothetical protein; GPW/gp25 family protein 506417..506833 Rahnella sp. Y9602 10216035 YP_004215623.1 CDS Rahaq_4921 NC_015062.1 506846 508648 D KEGG: plu:plu2297 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; type VI secretion protein 506846..508648 Rahnella sp. Y9602 10216036 YP_004215624.1 CDS Rahaq_4922 NC_015062.1 508639 509586 D KEGG: pay:PAU_02277 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; type VI secretion protein 508639..509586 Rahnella sp. Y9602 10216037 YP_004215625.1 CDS Rahaq_4923 NC_015062.1 509590 511503 D TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; KEGG: pay:PAU_02276 hypothetical protein; ImpA family type VI secretion-associated protein 509590..511503 Rahnella sp. Y9602 10216038 YP_004215626.1 CDS Rahaq_4924 NC_015062.1 511517 512032 D KEGG: eck:EC55989_3291 hypothetical protein; hypothetical protein 511517..512032 Rahnella sp. Y9602 10216039 YP_004215627.1 CDS Rahaq_4925 NC_015062.1 512032 512331 D PFAM: PAAR repeat-containing protein; KEGG: etr:ETAE_2438 type VI secretion system protein EvpJ; PAAR repeat-containing protein 512032..512331 Rahnella sp. Y9602 10216040 YP_004215628.1 CDS Rahaq_4926 NC_015062.1 512343 513407 D KEGG: eck:EC55989_3289 hypothetical protein; TIGRFAM: type VI secretion-associated protein, ImpA family; PFAM: ImpA domain protein; type VI secretion-associated protein, ImpA family 512343..513407 Rahnella sp. Y9602 10216041 YP_004215629.1 CDS Rahaq_4927 NC_015062.1 513404 513979 D TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: pay:PAU_02272 hypothetical protein; type VI secretion lipoprotein 513404..513979 Rahnella sp. Y9602 10216042 YP_004215630.1 CDS Rahaq_4928 NC_015062.1 513979 515373 D KEGG: pay:PAU_02271 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; type VI secretion protein 513979..515373 Rahnella sp. Y9602 10216043 YP_004215631.1 CDS Rahaq_4929 NC_015062.1 515370 515996 D PFAM: type IV / VI secretion system, DotU; KEGG: eck:EC55989_3285 hypothetical protein; type IV / VI secretion system, DotU 515370..515996 Rahnella sp. Y9602 10216044 YP_004215632.1 CDS Rahaq_4930 NC_015062.1 516003 519440 D KEGG: pay:PAU_02269 hypothetical protein; hypothetical protein 516003..519440 Rahnella sp. Y9602 10216045 YP_004215633.1 CDS Rahaq_4931 NC_015062.1 519486 522056 D TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: pay:PAU_02268 ClpA/B-type chaperone; SMART: AAA ATPase; type VI secretion ATPase, ClpV1 family 519486..522056 Rahnella sp. Y9602 10216046 YP_004215634.1 CDS Rahaq_4932 NC_015062.1 522077 523426 D KEGG: ypi:YpsIP31758_0805 ImpA domain-containing protein; hypothetical protein 522077..523426 Rahnella sp. Y9602 10216047 YP_004215635.1 CDS Rahaq_4933 NC_015062.1 523465 524178 D KEGG: hde:HDEF_1405 RTX-family protein-18; hypothetical protein 523465..524178 Rahnella sp. Y9602 10216048 YP_004215636.1 CDS Rahaq_4934 NC_015062.1 524374 526248 D KEGG: ctu:Ctu_42080 potassium transport protein Kup; TIGRFAM: potassium uptake protein; PFAM: K potassium transporter; potassium uptake protein 524374..526248 Rahnella sp. Y9602 10216049 YP_004215637.1 CDS Rahaq_4935 NC_015062.1 526300 527058 R KEGG: ebi:EbC_22120 hypothetical protein; hypothetical protein complement(526300..527058) Rahnella sp. Y9602 10216050 YP_004215638.1 CDS Rahaq_4936 NC_015062.1 527213 528100 D PFAM: beta-lactamase; KEGG: sit:TM1040_1900 beta-lactamase; beta-lactamase 527213..528100 Rahnella sp. Y9602 10216051 YP_004215639.1 CDS Rahaq_4937 NC_015062.1 528114 528509 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bph:Bphy_3323 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(528114..528509) Rahnella sp. Y9602 10216052 YP_004215640.1 CDS Rahaq_4938 NC_015062.1 528648 529646 D KEGG: yen:YE2511 hypothetical protein; hypothetical protein 528648..529646 Rahnella sp. Y9602 10216053 YP_004215641.1 CDS Rahaq_4939 NC_015062.1 529734 530906 D PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE2512 inner membrane protein; major facilitator superfamily protein 529734..530906 Rahnella sp. Y9602 10216054 YP_004215642.1 CDS Rahaq_4940 NC_015062.1 531023 531835 D KEGG: yen:YE2513 hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase 531023..531835 Rahnella sp. Y9602 10216055 YP_004215643.1 CDS Rahaq_4941 NC_015062.1 531914 532453 R KEGG: dda:Dd703_3534 hypothetical protein; hypothetical protein complement(531914..532453) Rahnella sp. Y9602 10216056 YP_004215644.1 CDS Rahaq_4942 NC_015062.1 532468 532815 R KEGG: dda:Dd703_3535 hypothetical protein; hypothetical protein complement(532468..532815) Rahnella sp. Y9602 10216057 YP_004215645.1 CDS Rahaq_4943 NC_015062.1 533075 533518 R KEGG: eta:ETA_22020 transcriptional regulator; PFAM: iron dependent repressor; SMART: iron dependent repressor; DtxR family iron (metal) dependent repressor complement(533075..533518) Rahnella sp. Y9602 10216058 YP_004215646.1 CDS Rahaq_4944 NC_015062.1 533706 534647 D PFAM: periplasmic solute binding protein; KEGG: spe:Spro_2133 periplasmic solute binding protein; periplasmic solute binding protein 533706..534647 Rahnella sp. Y9602 10216059 YP_004215647.1 CDS Rahaq_4945 NC_015062.1 534644 535423 D KEGG: spe:Spro_2132 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 534644..535423 Rahnella sp. Y9602 10216060 YP_004215648.1 CDS Rahaq_4946 NC_015062.1 535420 536274 D PFAM: ABC transporter; KEGG: ypb:YPTS_2423 ABC transporter; ABC transporter 535420..536274 Rahnella sp. Y9602 10216061 YP_004215649.1 CDS Rahaq_4947 NC_015062.1 536271 537125 D PFAM: ABC transporter; KEGG: ddd:Dda3937_00373 manganese ABC transporter inner membrane permease SitD; ABC transporter 536271..537125 Rahnella sp. Y9602 10216062 YP_004215650.1 CDS Rahaq_4948 NC_015062.1 537265 537444 D KEGG: tac:Ta1473 hypothetical protein; hypothetical protein 537265..537444 Rahnella sp. Y9602 10216063 YP_004215651.1 CDS Rahaq_4949 NC_015062.1 537611 538855 R KEGG: cko:CKO_02850 tryptophan permease; TIGRFAM: aromatic amino acid transporter; PFAM: Tryptophan/tyrosine permease; aromatic amino acid transporter complement(537611..538855) Rahnella sp. Y9602 10216064 YP_004215652.1 CDS Rahaq_4950 NC_015062.1 539799 540533 R PFAM: Pirin domain protein; KEGG: ebi:EbC_pEb10200360 pirin domain protein; pirin complement(539799..540533) Rahnella sp. Y9602 10216065 YP_004215653.1 CDS Rahaq_4951 NC_015062.1 540604 541635 R KEGG: spe:Spro_2529 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(540604..541635) Rahnella sp. Y9602 10216066 YP_004215654.1 CDS Rahaq_4952 NC_015062.1 541815 542939 R PFAM: lambda integrase ; integrase family protein; KEGG: sgl:SG1699 phage integrase; lambda integrase complement(541815..542939) Rahnella sp. Y9602 10216067 YP_004215655.1 CDS Rahaq_4953 NC_015062.1 542923 543165 R KEGG: ecz:ECS88_1328 phage excisionase; phage excisionase complement(542923..543165) Rahnella sp. Y9602 10216068 YP_004215656.1 CDS Rahaq_4954 NC_015062.1 543244 543747 R PFAM: Gp157 family protein; KEGG: epy:EpC_17420 conserved uncharacterized protein; Gp157 family protein complement(543244..543747) Rahnella sp. Y9602 10216069 YP_004215657.1 CDS Rahaq_4955 NC_015062.1 543744 546122 R KEGG: epy:EpC_17430 similarities with exodeoxyribonuclease VIII; hypothetical protein complement(543744..546122) Rahnella sp. Y9602 10216070 YP_004215658.1 CDS Rahaq_4956 NC_015062.1 546142 546441 R KEGG: xce:Xcel_0917 extracellular solute-binding protein family 1; hypothetical protein complement(546142..546441) Rahnella sp. Y9602 10216071 YP_004215659.1 CDS Rahaq_4957 NC_015062.1 546664 546960 R KEGG: ere:EUBREC_1081 periplasmic alpha-amylase precursor; hypothetical protein complement(546664..546960) Rahnella sp. Y9602 10216072 YP_004215660.1 CDS Rahaq_4958 NC_015062.1 547109 547264 R KEGG: bvu:BVU_0833 two-component system sensor histidine kinase; hypothetical protein complement(547109..547264) Rahnella sp. Y9602 10216073 YP_004215661.1 CDS Rahaq_4959 NC_015062.1 547581 547943 R KEGG: bbr:BB4657 hemin binding protein; hypothetical protein complement(547581..547943) Rahnella sp. Y9602 10216074 YP_004215662.1 CDS Rahaq_4960 NC_015062.1 548149 548610 R PFAM: helix-turn-helix domain protein; KEGG: set:SEN1383 predicted phage protein; helix-turn-helix domain-containing protein complement(548149..548610) Rahnella sp. Y9602 10216075 YP_004215663.1 CDS Rahaq_4961 NC_015062.1 548714 548962 D KEGG: ecq:ECED1_1006 regulator of the C1 family (possibly fragment); PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 548714..548962 Rahnella sp. Y9602 10216076 YP_004215664.1 CDS Rahaq_4962 NC_015062.1 548973 549437 D PFAM: protein of unknown function DUF1019; KEGG: ecq:ECED1_1738 conserved hypothetical protein from phage origin; hypothetical protein 548973..549437 Rahnella sp. Y9602 10216077 YP_004215665.1 CDS Rahaq_4963 NC_015062.1 549454 549690 D KEGG: brm:Bmur_1018 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 549454..549690 Rahnella sp. Y9602 10216078 YP_004215666.1 CDS Rahaq_4964 NC_015062.1 549687 549854 D hypothetical protein 549687..549854 Rahnella sp. Y9602 10216079 YP_004215667.1 CDS Rahaq_4965 NC_015062.1 549857 550843 D KEGG: spq:SPAB_02260 hypothetical protein; hypothetical protein 549857..550843 Rahnella sp. Y9602 10216080 YP_004215668.1 CDS Rahaq_4966 NC_015062.1 550833 551279 D KEGG: eoh:ECO103_1368 replication protein; replication protein 550833..551279 Rahnella sp. Y9602 10216081 YP_004215669.1 CDS Rahaq_4967 NC_015062.1 551407 551883 D KEGG: enc:ECL_01667 hypothetical protein; hypothetical protein 551407..551883 Rahnella sp. Y9602 10216082 YP_004215670.1 CDS Rahaq_4968 NC_015062.1 551876 552298 D KEGG: etr:ETAE_1605 hypothetical protein; hypothetical protein 551876..552298 Rahnella sp. Y9602 10216083 YP_004215671.1 CDS Rahaq_4969 NC_015062.1 552295 552789 D KEGG: sed:SeD_A2298 hypothetical protein; hypothetical protein 552295..552789 Rahnella sp. Y9602 10216084 YP_004215672.1 CDS Rahaq_4970 NC_015062.1 552786 552974 D KEGG: lcz:LCAZH_2090 hypothetical protein; hypothetical protein 552786..552974 Rahnella sp. Y9602 10216085 YP_004215673.1 CDS Rahaq_4971 NC_015062.1 552974 553234 D KEGG: cel:T21E3.3 Low-density lipoprotein Receptor Related family member (lrp-2); hypothetical protein 552974..553234 Rahnella sp. Y9602 10216086 YP_004215674.1 CDS Rahaq_4972 NC_015062.1 553238 553921 D KEGG: ecg:E2348C_2779 hypothetical protein; hypothetical protein 553238..553921 Rahnella sp. Y9602 10216087 YP_004215675.1 CDS Rahaq_4973 NC_015062.1 553918 554121 D KEGG: pop:POPTR_920495 hypothetical protein; hypothetical protein 553918..554121 Rahnella sp. Y9602 10216088 YP_004215676.1 CDS Rahaq_4974 NC_015062.1 554114 554623 D KEGG: eoh:ECO103_2873 hypothetical protein; hypothetical protein 554114..554623 Rahnella sp. Y9602 10216089 YP_004215677.1 CDS Rahaq_4975 NC_015062.1 554620 554853 D KEGG: lpp:lpp1322 hypothetical protein; hypothetical protein 554620..554853 Rahnella sp. Y9602 10216090 YP_004215678.1 CDS Rahaq_4976 NC_015062.1 554850 555296 D KEGG: cre:CHLREDRAFT_189109 flagellar associated protein; hypothetical protein 554850..555296 Rahnella sp. Y9602 10216091 YP_004215679.1 CDS Rahaq_4977 NC_015062.1 555296 555478 D KEGG: mth:MTH1314 transcription elongation factor TFIIS; hypothetical protein 555296..555478 Rahnella sp. Y9602 10216092 YP_004215680.1 CDS Rahaq_4978 NC_015062.1 555475 555771 D KEGG: mcc:696763 small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta; hypothetical protein 555475..555771 Rahnella sp. Y9602 10216093 YP_004215681.1 CDS Rahaq_4979 NC_015062.1 555811 555993 D hypothetical protein 555811..555993 Rahnella sp. Y9602 10216094 YP_004215682.1 CDS Rahaq_4980 NC_015062.1 556225 556419 D KEGG: ecy:ECSE_2236 hypothetical protein; hypothetical protein 556225..556419 Rahnella sp. Y9602 10216095 YP_004215683.1 CDS Rahaq_4981 NC_015062.1 556512 557108 D PFAM: protein of unknown function DUF1367; KEGG: see:SNSL254_A1146 gifsy-2 prophage protein; hypothetical protein 556512..557108 Rahnella sp. Y9602 10216096 YP_004215684.1 CDS Rahaq_4982 NC_015062.1 557105 557401 D KEGG: enc:ECL_01672 hypothetical protein; hypothetical protein 557105..557401 Rahnella sp. Y9602 10216097 YP_004215685.1 CDS Rahaq_4983 NC_015062.1 557398 558072 D PFAM: antitermination Q family protein; KEGG: epy:EpC_17570 conserved phage protein; antitermination Q family protein 557398..558072 Rahnella sp. Y9602 10216098 YP_004215686.1 CDS Rahaq_4984 NC_015062.1 558245 558463 D PFAM: Lysis S family protein; KEGG: yps:YPTB1804 holin protein; Lysis S family protein 558245..558463 Rahnella sp. Y9602 10216099 YP_004215687.1 CDS Rahaq_4985 NC_015062.1 558466 558996 D KEGG: sgl:SG1681 phage lysozyme lysis protein; PFAM: glycoside hydrolase family 24; lysozyme 558466..558996 Rahnella sp. Y9602 10216100 YP_004215688.1 CDS Rahaq_4986 NC_015062.1 558989 559522 D KEGG: spe:Spro_4928 hypothetical protein; hypothetical protein 558989..559522 Rahnella sp. Y9602 10216101 YP_004215689.1 CDS Rahaq_4987 NC_015062.1 559519 559761 D KEGG: mno:Mnod_6525 hypothetical protein; hypothetical protein 559519..559761 Rahnella sp. Y9602 10216102 YP_004215690.1 CDS Rahaq_4988 NC_015062.1 559758 560315 D KEGG: enc:ECL_03092 hypothetical protein; PFAM: Ig domain protein group 1 domain protein; SMART: Ig domain protein group 1 domain protein; Ig domain-containing protein group 1 domain-containing protein 559758..560315 Rahnella sp. Y9602 10216103 YP_004215691.1 CDS Rahaq_4989 NC_015062.1 560384 560566 D KEGG: sty:STY2042 hypothetical protein; hypothetical protein 560384..560566 Rahnella sp. Y9602 10216104 YP_004215692.1 CDS Rahaq_4990 NC_015062.1 560581 561366 D KEGG: ssn:SSON_0735 bacteriophage protein; bacteriophage protein 560581..561366 Rahnella sp. Y9602 10216105 YP_004215693.1 CDS Rahaq_4991 NC_015062.1 561573 563192 D PFAM: terminase large subunit; KEGG: see:SNSL254_A1154 GP33 TerL; terminase large subunit 561573..563192 Rahnella sp. Y9602 10216106 YP_004215694.1 CDS Rahaq_4992 NC_015062.1 563192 564643 D TIGRFAM: phage-associated protein, HI1409 family; KEGG: ecr:ECIAI1_2646 hypothetical protein; CRISPR-associated protein 563192..564643 Rahnella sp. Y9602 10216107 YP_004215695.1 CDS Rahaq_4993 NC_015062.1 564660 565253 D KEGG: ecg:E2348C_2511 predicted head morphogenesis protein; TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; PFAM: head morphogenesis protein SPP1 gp7; phage head morphogenesis protein 564660..565253 Rahnella sp. Y9602 10216108 YP_004215696.1 CDS Rahaq_4994 NC_015062.1 565303 566508 D PFAM: Protein of unknown function DUF2213; KEGG: see:SNSL254_A1157 hypothetical protein; hypothetical protein 565303..566508 Rahnella sp. Y9602 10216109 YP_004215697.1 CDS Rahaq_4995 NC_015062.1 566515 566994 D KEGG: see:SNSL254_A1158 bacteriophage protein; bacteriophage protein 566515..566994 Rahnella sp. Y9602 10216110 YP_004215698.1 CDS Rahaq_4996 NC_015062.1 567007 567951 D PFAM: Protein of unknown function DUF2184; KEGG: eok:G2583_3116 bacteriophage protein; hypothetical protein 567007..567951 Rahnella sp. Y9602 10216111 YP_004215699.1 CDS Rahaq_4997 NC_015062.1 568015 568374 D KEGG: see:SNSL254_A1160 bacteriophage protein; hypothetical protein 568015..568374 Rahnella sp. Y9602 10216112 YP_004215700.1 CDS Rahaq_4998 NC_015062.1 568340 568756 D KEGG: eoh:ECO103_3108 hypothetical protein; hypothetical protein 568340..568756 Rahnella sp. Y9602 10216113 YP_004215701.1 CDS Rahaq_4999 NC_015062.1 568756 569385 D KEGG: spq:SPAB_02229 hypothetical protein; hypothetical protein 568756..569385 Rahnella sp. Y9602 10216114 YP_004215702.1 CDS Rahaq_5000 NC_015062.1 569372 569758 D KEGG: ecg:E2348C_2504 hypothetical protein; hypothetical protein 569372..569758 Rahnella sp. Y9602 10216115 YP_004215703.1 CDS Rahaq_5001 NC_015062.1 569751 570296 D KEGG: ent:Ent638_0805 bacteriophage protein; bacteriophage protein 569751..570296 Rahnella sp. Y9602 10216116 YP_004215704.1 CDS Rahaq_5002 NC_015062.1 570302 571444 D KEGG: spq:SPAB_02226 hypothetical protein; hypothetical protein 570302..571444 Rahnella sp. Y9602 10216117 YP_004215705.1 CDS Rahaq_5003 NC_015062.1 571454 571894 D KEGG: spq:SPAB_02225 hypothetical protein; hypothetical protein 571454..571894 Rahnella sp. Y9602 10216118 YP_004215706.1 CDS Rahaq_5004 NC_015062.1 571898 572326 D KEGG: spq:SPAB_02224 hypothetical protein; hypothetical protein 571898..572326 Rahnella sp. Y9602 10216119 YP_004215707.1 CDS Rahaq_5005 NC_015062.1 572504 574438 D PFAM: Lytic transglycosylase catalytic; KEGG: see:SNSL254_A1168 lytic transglycosylase, catalytic; lytic transglycosylase 572504..574438 Rahnella sp. Y9602 10216120 YP_004215708.1 CDS Rahaq_5006 NC_015062.1 574438 575037 D KEGG: stt:t1879 bacteriophage protein; bacteriophage protein 574438..575037 Rahnella sp. Y9602 10216121 YP_004215709.1 CDS Rahaq_5007 NC_015062.1 575038 575346 D KEGG: see:SNSL254_A1170 bacteriophage protein; bacteriophage protein 575038..575346 Rahnella sp. Y9602 10216122 YP_004215710.1 CDS Rahaq_5008 NC_015062.1 575346 576371 D KEGG: sec:SC2593 bacteriophage protein; bacteriophage protein 575346..576371 Rahnella sp. Y9602 10216123 YP_004215711.1 CDS Rahaq_5009 NC_015062.1 576371 576712 D KEGG: sec:SC2592 hypothetical protein; hypothetical protein 576371..576712 Rahnella sp. Y9602 10216124 YP_004215712.1 CDS Rahaq_5010 NC_015062.1 576740 577126 D KEGG: rme:Rmet_5469 hypothetical protein; hypothetical protein 576740..577126 Rahnella sp. Y9602 10216125 YP_004215713.1 CDS Rahaq_5011 NC_015062.1 577199 577951 D KEGG: spq:SPAB_02215 hypothetical protein; hypothetical protein 577199..577951 Rahnella sp. Y9602 10216126 YP_004215714.1 CDS Rahaq_5012 NC_015062.1 577953 578306 D KEGG: sty:STY1069 bacteriophage protein; bacteriophage protein 577953..578306 Rahnella sp. Y9602 10216127 YP_004215715.1 CDS Rahaq_5013 NC_015062.1 578306 579505 D KEGG: sty:STY1070 bacteriophage protein; bacteriophage protein 578306..579505 Rahnella sp. Y9602 10216128 YP_004215716.1 CDS Rahaq_5014 NC_015062.1 579502 580272 D KEGG: stt:t1869 bacteriophage protein; bacteriophage protein 579502..580272 Rahnella sp. Y9602 10216129 YP_004215717.1 CDS Rahaq_5015 NC_015062.1 580319 582697 D KEGG: bcj:BCAL1560 hypothetical protein; hypothetical protein 580319..582697 Rahnella sp. Y9602 10216130 YP_004215718.1 CDS Rahaq_5016 NC_015062.1 582709 583461 D KEGG: syr:SynRCC307_0619 Hep_Hag repeat-containing outer membrane protein; hypothetical protein 582709..583461 Rahnella sp. Y9602 10216131 YP_004215719.1 CDS Rahaq_5017 NC_015062.1 583552 584271 D KEGG: bvi:Bcep1808_4560 hypothetical protein; hypothetical protein 583552..584271 Rahnella sp. Y9602 10216132 YP_004215720.1 CDS Rahaq_5018 NC_015062.1 584283 584702 D PFAM: tail assembly chaperone gp38; KEGG: sfv:SFV_0255 phage tail fibre protein; tail assembly chaperone gp38 584283..584702 Rahnella sp. Y9602 10216133 YP_004215721.1 CDS Rahaq_5019 NC_015062.1 584876 585511 R KEGG: spe:Spro_2529 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(584876..585511) Rahnella sp. Y9602 10216134 YP_004215722.1 CDS Rahaq_5020 NC_015062.1 585863 587101 R PFAM: major facilitator superfamily MFS_1; KEGG: ebi:EbC_28800 major facilitator superfamily; major facilitator superfamily protein complement(585863..587101) Rahnella sp. Y9602 10216135 YP_004215723.1 CDS Rahaq_5021 NC_015062.1 587240 588163 R PFAM: alpha/beta hydrolase fold; KEGG: ebi:EbC_25500 hydrolase; alpha/beta hydrolase fold protein complement(587240..588163) Rahnella sp. Y9602 10216136 YP_004215724.1 CDS Rahaq_5022 NC_015062.1 588224 588841 R PFAM: regulatory protein TetR; KEGG: ebi:EbC_25490 transcriptional regulator; TetR family transcriptional regulator complement(588224..588841) Rahnella sp. Y9602 10216137 YP_004215725.1 CDS Rahaq_5023 NC_015062.1 588915 589592 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebi:EbC_22310 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(588915..589592) Rahnella sp. Y9602 10216138 YP_004215726.1 CDS Rahaq_5024 NC_015062.1 589701 589796 D hypothetical protein 589701..589796 Rahnella sp. Y9602 10216139 YP_004215727.1 CDS Rahaq_5025 NC_015062.1 590331 590531 D KEGG: ent:Ent638_4271 hypothetical protein; hypothetical protein 590331..590531 Rahnella sp. Y9602 10216140 YP_004215728.1 CDS Rahaq_5026 NC_015062.1 591148 591921 D KEGG: dda:Dd703_2719 hypothetical protein; hypothetical protein 591148..591921 Rahnella sp. Y9602 10216141 YP_004215729.1 CDS Rahaq_5027 NC_015062.1 591968 593653 R PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: yen:YE2794 malate dehydrogenase; malic protein NAD-binding protein complement(591968..593653) Rahnella sp. Y9602 10216142 YP_004215730.1 CDS Rahaq_5028 NC_015062.1 594149 595093 D PFAM: Auxin Efflux Carrier; KEGG: kva:Kvar_1738 auxin efflux carrier; hypothetical protein 594149..595093 Rahnella sp. Y9602 10216143 YP_004215731.1 CDS Rahaq_5029 NC_015062.1 595170 596816 R KEGG: enc:ECL_02274 fumarase; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit beta complement(595170..596816) Rahnella sp. Y9602 10216144 YP_004215732.1 CDS Rahaq_5030 NC_015062.1 597007 598518 R KEGG: enc:ECL_03251 anion transporter; TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; anion transporter complement(597007..598518) Rahnella sp. Y9602 10216145 YP_004215733.1 CDS Rahaq_5031 NC_015062.1 599258 602035 D KEGG: dze:Dd1591_3495 flavocytochrome c; TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; NADH:flavin oxidoreductase/NADH oxidase; FMN-binding domain protein; flavocytochrome c 599258..602035 Rahnella sp. Y9602 10216146 YP_004215734.1 CDS Rahaq_5032 NC_015062.1 602060 603022 D PFAM: ApbE family lipoprotein; KEGG: ebi:EbC_17560 thiamine biosynthesis protein; ApbE family lipoprotein 602060..603022 Rahnella sp. Y9602 10216147 YP_004215735.1 CDS Rahaq_5033 NC_015062.1 603016 603735 R KEGG: pam:PANA_4115 DcuR; PFAM: response regulator receiver; SMART: response regulator receiver; fused response regulator receiver/hypothetical protein complement(603016..603735) Rahnella sp. Y9602 10216148 YP_004215736.1 CDS Rahaq_5034 NC_015062.1 603732 605351 R KEGG: ebi:EbC_17580 response regulator in two-component regulatory system with DcuR; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; signal transduction histidine kinase regulating citrate/malate metabolism complement(603732..605351) Rahnella sp. Y9602 10216149 YP_004215737.1 CDS Rahaq_5035 NC_015062.1 605590 605907 R KEGG: esa:ESA_01130 hypothetical protein; hypothetical protein complement(605590..605907) Rahnella sp. Y9602 10216150 YP_004215738.1 CDS Rahaq_5036 NC_015062.1 606237 607142 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebi:EbC_12850 short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 606237..607142 Rahnella sp. Y9602 10216151 YP_004215739.1 CDS Rahaq_5037 NC_015062.1 607457 607678 D KEGG: oaa:100078598 similar to pheromone receptor V2R1b; hypothetical protein 607457..607678 Rahnella sp. Y9602 10216152 YP_004215740.1 CDS Rahaq_5038 NC_015062.1 607627 607782 R hypothetical protein complement(607627..607782) Rahnella sp. Y9602 10216153 YP_004215741.1 CDS Rahaq_5039 NC_015062.1 607884 608792 R PFAM: sugar isomerase (SIS); KEGG: cko:CKO_02841 hypothetical protein; RpiR family transcriptional regulator complement(607884..608792) Rahnella sp. Y9602 10216154 YP_004215742.1 CDS Rahaq_5040 NC_015062.1 609079 611265 D KEGG: pam:PANA_4210 FoxA; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; TonB-dependent siderophore receptor 609079..611265 Rahnella sp. Y9602 10216155 YP_004215743.1 CDS Rahaq_5041 NC_015062.1 611303 612394 D KEGG: pam:PANA_4209 YadT; Fe3+-hydroxamate ABC transporter periplasmic protein 611303..612394 Rahnella sp. Y9602 10216156 YP_004215744.1 CDS Rahaq_5042 NC_015062.1 612658 614211 D KEGG: cro:ROD_03881 peptide transport protein; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; amino acid/peptide transporter 612658..614211 Rahnella sp. Y9602 10216157 YP_004215745.1 CDS Rahaq_5043 NC_015062.1 614283 614714 R TIGRFAM: arsenate reductase; KEGG: ect:ECIAI39_3995 arsenate reductase; PFAM: arsenate reductase and related; arsenate reductase complement(614283..614714) Rahnella sp. Y9602 10216158 YP_004215746.1 CDS Rahaq_5044 NC_015062.1 614766 616055 R KEGG: ypy:YPK_3416 arsenical pump membrane protein; TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; arsenical pump membrane protein complement(614766..616055) Rahnella sp. Y9602 10216159 YP_004215747.1 CDS Rahaq_5045 NC_015062.1 616100 616420 R KEGG: enc:ECL_02869 arsenic-efflux pump regulatory protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; ArsR family transcriptional regulator complement(616100..616420) Rahnella sp. Y9602 10216160 YP_004215748.1 CDS Rahaq_5046 NC_015063.1 550 1656 D PFAM: hypothetical protein; KEGG: rru:Rru_A0500 extracellular solute-binding protein; hypothetical protein 550..1656 Rahnella sp. Y9602 10216304 YP_004215749.1 CDS Rahaq_5047 NC_015063.1 1640 2590 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_2135 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1640..2590 Rahnella sp. Y9602 10216166 YP_004215750.1 CDS Rahaq_5048 NC_015063.1 2587 3381 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pde:Pden_0831 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2587..3381 Rahnella sp. Y9602 10216167 YP_004215751.1 CDS Rahaq_5049 NC_015063.1 3378 4469 D KEGG: mlo:mll3065 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter 3378..4469 Rahnella sp. Y9602 10216168 YP_004215752.1 CDS Rahaq_5050 NC_015063.1 4541 4687 D hypothetical protein 4541..4687 Rahnella sp. Y9602 10216169 YP_004215753.1 CDS Rahaq_5052 NC_015063.1 5858 6973 R TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: cvi:CV_0556 N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; N-acetylglucosamine-6-phosphate deacetylase complement(5858..6973) Rahnella sp. Y9602 10216290 YP_004215754.1 CDS Rahaq_5053 NC_015063.1 7067 7936 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bvi:Bcep1808_5096 LysR family transcriptional regulator; LysR family transcriptional regulator 7067..7936 Rahnella sp. Y9602 10216171 YP_004215755.1 CDS Rahaq_5054 NC_015063.1 8197 8940 R PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: bcm:Bcenmc03_2497 NADP oxidoreductase coenzyme F420-dependent; coenzyme F420-dependent NADP oxidoreductase complement(8197..8940) Rahnella sp. Y9602 10216172 YP_004215756.1 CDS Rahaq_5055 NC_015063.1 9123 9881 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: vap:Vapar_1647 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(9123..9881) Rahnella sp. Y9602 10216173 YP_004215757.1 CDS Rahaq_5056 NC_015063.1 9999 10595 D PFAM: regulatory protein TetR; KEGG: bcm:Bcenmc03_2496 TetR family transcriptional regulator; TetR family transcriptional regulator 9999..10595 Rahnella sp. Y9602 10216174 YP_004215758.1 CDS Rahaq_5057 NC_015063.1 10729 10875 R hypothetical protein complement(10729..10875) Rahnella sp. Y9602 10216175 YP_004215759.1 CDS Rahaq_5058 NC_015063.1 11817 12218 R SMART: helix-turn-helix domain protein; KEGG: ebd:ECBD_0718 transcriptional regulator, XRE family; hypothetical protein complement(11817..12218) Rahnella sp. Y9602 10216176 YP_004215760.1 CDS Rahaq_5059 NC_015063.1 12220 12516 R KEGG: ebd:ECBD_0717 hypothetical protein; hypothetical protein complement(12220..12516) Rahnella sp. Y9602 10216177 YP_004215761.1 CDS Rahaq_5060 NC_015063.1 12611 13069 R KEGG: xtr:100151729 homeobox A3; hypothetical protein complement(12611..13069) Rahnella sp. Y9602 10216178 YP_004215762.1 CDS Rahaq_5061 NC_015063.1 13066 13371 R KEGG: cim:CIMG_05876 hypothetical protein; hypothetical protein complement(13066..13371) Rahnella sp. Y9602 10216179 YP_004215763.1 CDS Rahaq_5062 NC_015063.1 13374 13616 R PFAM: protein of unknown function DUF905; KEGG: kpn:KPN_pKPN4p07110 hypothetical protein; hypothetical protein complement(13374..13616) Rahnella sp. Y9602 10216180 YP_004215764.1 CDS Rahaq_5063 NC_015063.1 14446 14646 R KEGG: sec:SC124 hypothetical protein; hypothetical protein complement(14446..14646) Rahnella sp. Y9602 10216181 YP_004215765.1 CDS Rahaq_5064 NC_015063.1 14688 15188 R PFAM: antirestriction ArdA family protein; KEGG: kpn:KPN_pKPN5p08170 putative antirestriction protein; antirestriction ArdA family protein complement(14688..15188) Rahnella sp. Y9602 10216182 YP_004215766.1 CDS Rahaq_5065 NC_015063.1 15596 16066 R KEGG: stm:PSLT056 hypothetical protein; hypothetical protein complement(15596..16066) Rahnella sp. Y9602 10216183 YP_004215767.1 CDS Rahaq_5066 NC_015063.1 16431 16652 R KEGG: etw:ECSP_6045 hypothetical protein; hypothetical protein complement(16431..16652) Rahnella sp. Y9602 10216184 YP_004215768.1 CDS Rahaq_5067 NC_015063.1 16681 17325 R PFAM: DNA methylase N-4/N-6 domain protein; KEGG: enc:ECL_A075 DNA methylase family protein; DNA methylase N-4/N-6 domain-containing protein complement(16681..17325) Rahnella sp. Y9602 10216185 YP_004215769.1 CDS Rahaq_5068 NC_015063.1 17609 17830 D KEGG: ang:An01g08210 hypothetical protein; hypothetical protein 17609..17830 Rahnella sp. Y9602 10216186 YP_004215770.1 CDS Rahaq_5069 NC_015063.1 17866 18099 R KEGG: ssc:396960 albumin; hypothetical protein complement(17866..18099) Rahnella sp. Y9602 10216187 YP_004215771.1 CDS Rahaq_5070 NC_015063.1 18636 19640 R PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ddd:Dda3937_00500 ISEch4 transposase; transposase IS116/IS110/IS902 family protein complement(18636..19640) Rahnella sp. Y9602 10216188 YP_004215772.1 CDS Rahaq_5071 NC_015063.1 19749 19982 R KEGG: ebi:EbC_pEb17201520 hypothetical protein; hypothetical protein complement(19749..19982) Rahnella sp. Y9602 10216189 YP_004215773.1 CDS Rahaq_5072 NC_015063.1 20020 20415 R PFAM: Plasmid stability protein, StbB; KEGG: eay:EAM_P218 plasmid stability protein; plasmid stability protein StbB complement(20020..20415) Rahnella sp. Y9602 10216190 YP_004215774.1 CDS Rahaq_5074 NC_015063.1 21381 22346 R TIGRFAM: parB-like partition protein; PFAM: ParB family protein; ParB domain protein nuclease; KEGG: esa:ESA_pESA3p05553 hypothetical protein; SMART: ParB domain protein nuclease; parB-like partition protein complement(21381..22346) Rahnella sp. Y9602 10216291 YP_004215775.1 CDS Rahaq_5075 NC_015063.1 22355 23554 R KEGG: ctu:Ctu_1p01110 plasmid partition protein A; plasmid partition protein A complement(22355..23554) Rahnella sp. Y9602 10216192 YP_004215776.1 CDS Rahaq_5076 NC_015063.1 23884 24144 R KEGG: pfo:Pfl01_4635 addiction module toxin, Txe/YoeB; TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Addiction module toxin Txe/YoeB; Txe/YoeB family addiction module toxin complement(23884..24144) Rahnella sp. Y9602 10216193 YP_004215777.1 CDS Rahaq_5077 NC_015063.1 24141 24386 R TIGRFAM: prevent-host-death family protein; KEGG: etr:ETAE_1621 prevent-host-death protein; prevent-host-death family protein complement(24141..24386) Rahnella sp. Y9602 10216194 YP_004215778.1 CDS Rahaq_5078 NC_015063.1 24801 25808 R PFAM: initiator RepB protein; KEGG: yps:pYptb0001 plasmid replication protein; initiator RepB protein complement(24801..25808) Rahnella sp. Y9602 10216195 YP_004215779.1 CDS Rahaq_5079 NC_015063.1 26737 27372 D PFAM: LexA DNA-binding domain protein; KEGG: sgl:SG0619 hypothetical protein; LexA family transcriptional regulator 26737..27372 Rahnella sp. Y9602 10216196 YP_004215780.1 CDS Rahaq_5080 NC_015063.1 27366 27626 D KEGG: hde:HDEF_1039 hypothetical protein; hypothetical protein 27366..27626 Rahnella sp. Y9602 10216197 YP_004215781.1 CDS Rahaq_5081 NC_015063.1 27841 28632 R PFAM: integrase; KEGG: ecv:APECO1_O1CoBM116 resolvase; integrase complement(27841..28632) Rahnella sp. Y9602 10216198 YP_004215782.1 CDS Rahaq_5082 NC_015063.1 29183 29968 R KEGG: ebi:EbC_17740 transcriptional regulatory protein; hypothetical protein complement(29183..29968) Rahnella sp. Y9602 10216199 YP_004215783.1 CDS Rahaq_5084 NC_015063.1 30774 31391 D PFAM: Fimbrial protein domain-containing protein; KEGG: ebi:EbC_11310 fimbrial major subunit; fimbrial protein 30774..31391 Rahnella sp. Y9602 10216292 YP_004215784.1 CDS Rahaq_5085 NC_015063.1 31472 32173 D PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: eta:ETA_33020 fimbrial chaperone protein; pili assembly chaperone 31472..32173 Rahnella sp. Y9602 10216201 YP_004215785.1 CDS Rahaq_5086 NC_015063.1 32222 34879 D KEGG: ebi:EbC_11330 outer membrane usher protein, fimbrial-like; manually curated; PFAM: fimbrial biogenesis outer membrane usher protein; fimbrial biogenesis outer membrane usher protein 32222..34879 Rahnella sp. Y9602 10216202 YP_004215786.1 CDS Rahaq_5087 NC_015063.1 34964 35500 D PFAM: Fimbrial protein domain-containing protein; KEGG: ebi:EbC_11340 putative fimbrial subunit BcfE; fimbrial protein domain-containing protein 34964..35500 Rahnella sp. Y9602 10216203 YP_004215787.1 CDS Rahaq_5088 NC_015063.1 35526 36080 D PFAM: Fimbrial protein domain-containing protein; KEGG: ebi:EbC_11340 putative fimbrial subunit BcfE; fimbrial protein domain-containing protein 35526..36080 Rahnella sp. Y9602 10216204 YP_004215788.1 CDS Rahaq_5089 NC_015063.1 36178 36963 D KEGG: ebi:EbC_11350 hypothetical protein; hypothetical protein 36178..36963 Rahnella sp. Y9602 10216205 YP_004215789.1 CDS Rahaq_5090 NC_015063.1 38057 40657 D KEGG: ent:Ent638_4206 outer membrane autotransporter; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; Pertactin; outer membrane autotransporter barrel domain-containing protein 38057..40657 Rahnella sp. Y9602 10216206 YP_004215790.1 CDS Rahaq_5091 NC_015063.1 40770 41150 D KEGG: rpd:RPD_4117 ATP phosphoribosyltransferase regulatory subunit; hypothetical protein 40770..41150 Rahnella sp. Y9602 10216207 YP_004215791.1 CDS Rahaq_5092 NC_015063.1 41147 41455 D KEGG: cfa:609459 similar to Rho GTPase activating protein 20; hypothetical protein 41147..41455 Rahnella sp. Y9602 10216208 YP_004215792.1 CDS Rahaq_5094 NC_015063.1 41813 42217 D KEGG: ebi:EbC_35160 hypothetical protein; hypothetical protein 41813..42217 Rahnella sp. Y9602 10216293 YP_004215793.1 CDS Rahaq_5095 NC_015063.1 42468 43295 D PFAM: transcriptional regulator domain-containing protein; KEGG: ebi:EbC_17740 transcriptional regulatory protein; CadC family transcriptional regulator 42468..43295 Rahnella sp. Y9602 10216210 YP_004215794.1 CDS Rahaq_5096 NC_015063.1 43288 43773 D manually curated; KEGG: ebi:EbC_17730 hypothetical protein; hypothetical protein 43288..43773 Rahnella sp. Y9602 10216211 YP_004215795.1 CDS Rahaq_5097 NC_015063.1 44700 44936 D PFAM: hypothetical protein; KEGG: ebi:EbC_44280 putative lipoprotein; hypothetical protein 44700..44936 Rahnella sp. Y9602 10216212 YP_004215796.1 CDS Rahaq_5098 NC_015063.1 45125 45427 D KEGG: ebi:EbC_44290 hypothetical protein; hypothetical protein 45125..45427 Rahnella sp. Y9602 10216213 YP_004215797.1 CDS Rahaq_5099 NC_015063.1 45647 46027 D KEGG: xne:XNC1_1132 conserved hypothetical protein; putative exported protein; hypothetical protein 45647..46027 Rahnella sp. Y9602 10216214 YP_004215798.1 CDS Rahaq_5102 NC_015063.1 47512 50913 D KEGG: eta:ETA_05480 hypothetical protein; hypothetical protein 47512..50913 Rahnella sp. Y9602 10216295 YP_004215799.1 CDS Rahaq_5106 NC_015063.1 56384 56494 D hypothetical protein 56384..56494 Rahnella sp. Y9602 10216217 YP_004215800.1 CDS Rahaq_5107 NC_015063.1 56518 57738 D KEGG: eta:ETA_05470 similar to nematicidal protein 2; nematicidal protein 2-like protein 56518..57738 Rahnella sp. Y9602 10216218 YP_004215801.1 CDS Rahaq_5108 NC_015063.1 58303 58614 D PFAM: transposase IS3/IS911 family protein; KEGG: ebi:EbC_27880 transposase OrfAB, subunit A; transposase IS3/IS911 family protein 58303..58614 Rahnella sp. Y9602 10216219 YP_004215802.1 CDS Rahaq_5109 NC_015063.1 58650 59477 D KEGG: ebi:EbC_44320 transposase; manually curated; PFAM: Integrase catalytic region; integrase 58650..59477 Rahnella sp. Y9602 10216220 YP_004215803.1 CDS Rahaq_5110 NC_015063.1 59474 60811 D KEGG: ecv:APECO1_O1CoBM79 hypothetical protein; hypothetical protein 59474..60811 Rahnella sp. Y9602 10216221 YP_004215804.1 CDS Rahaq_5111 NC_015063.1 60796 61833 D KEGG: ecv:APECO1_O1CoBM78 hypothetical protein; hypothetical protein 60796..61833 Rahnella sp. Y9602 10216222 YP_004215805.1 CDS Rahaq_5112 NC_015063.1 61999 62103 D KEGG: eic:NT01EI_0264 hypothetical protein; hypothetical protein 61999..62103 Rahnella sp. Y9602 10216223 YP_004215806.1 CDS Rahaq_5113 NC_015063.1 62296 63072 D KEGG: sty:HCM2.0029c hypothetical protein; hypothetical protein 62296..63072 Rahnella sp. Y9602 10216224 YP_004215807.1 CDS Rahaq_5114 NC_015063.1 63383 64336 D KEGG: cro:ROD_p1471 hypothetical protein; hypothetical protein 63383..64336 Rahnella sp. Y9602 10216225 YP_004215808.1 CDS Rahaq_5115 NC_015063.1 64419 65192 R PFAM: integrase; KEGG: enc:ECL_B094 putative resolvase; integrase complement(64419..65192) Rahnella sp. Y9602 10216226 YP_004215809.1 CDS Rahaq_5116 NC_015063.1 65690 67180 D KEGG: bcq:BCQ_1338 hypothetical protein; hypothetical protein 65690..67180 Rahnella sp. Y9602 10216227 YP_004215810.1 CDS Rahaq_5117 NC_015063.1 67305 68018 D manually curated; KEGG: ecc:c0290 hypothetical protein; hypothetical protein 67305..68018 Rahnella sp. Y9602 10216228 YP_004215811.1 CDS Rahaq_5118 NC_015063.1 68471 69226 D KEGG: sty:HCM2.0044c hypothetical protein; hypothetical protein 68471..69226 Rahnella sp. Y9602 10216229 YP_004215812.1 CDS Rahaq_5119 NC_015063.1 69653 71239 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: har:HEAR1734 GGDEF domain-containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 69653..71239 Rahnella sp. Y9602 10216230 YP_004215813.1 CDS Rahaq_5120 NC_015063.1 71597 73696 R KEGG: epy:EpC_35530 microcin H47 secretion ATP-binding protein; PFAM: peptidase C39 bacteriocin processing; ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; peptidase C39 bacteriocin processing complement(71597..73696) Rahnella sp. Y9602 10216231 YP_004215814.1 CDS Rahaq_5121 NC_015063.1 73689 74963 R PFAM: secretion protein HlyD family protein; KEGG: epy:EpC_35520 microcin H47 secretion protein; secretion protein HlyD family protein complement(73689..74963) Rahnella sp. Y9602 10216232 YP_004215815.1 CDS Rahaq_5122 NC_015063.1 75813 76151 D KEGG: cel:T12F5.3 Germ-Line Helicase family member (glh-4); hypothetical protein 75813..76151 Rahnella sp. Y9602 10216233 YP_004215816.1 CDS Rahaq_5123 NC_015063.1 76261 76893 R PFAM: abortive infection protein; KEGG: kpe:KPK_A0150 putative membrane-bound protease; abortive infection protein complement(76261..76893) Rahnella sp. Y9602 10216234 YP_004215817.1 CDS Rahaq_5124 NC_015063.1 77688 78470 R PFAM: integrase; KEGG: efe:pEFER_0057 resolvase (protein D); integrase complement(77688..78470) Rahnella sp. Y9602 10216235 YP_004215818.1 CDS Rahaq_5125 NC_015063.1 78467 79171 R KEGG: efe:pEFER_0056 hypothetical protein, putative membrane transporter; hypothetical protein complement(78467..79171) Rahnella sp. Y9602 10216236 YP_004215819.1 CDS Rahaq_5126 NC_015063.1 79446 80441 D KEGG: ctu:Ctu_08830 hypothetical protein; hypothetical protein 79446..80441 Rahnella sp. Y9602 10216237 YP_004215820.1 CDS Rahaq_5127 NC_015063.1 80445 81062 D KEGG: ctu:Ctu_08840 hypothetical protein; hypothetical protein 80445..81062 Rahnella sp. Y9602 10216238 YP_004215821.1 CDS Rahaq_5128 NC_015063.1 81074 81868 R KEGG: epy:EpC_07540 transposase subunit; manually curated; PFAM: Integrase catalytic region; integrase complement(81074..81868) Rahnella sp. Y9602 10216239 YP_004215822.1 CDS Rahaq_5129 NC_015063.1 81919 82185 R PFAM: transposase IS3/IS911 family protein; KEGG: ent:Ent638_4321 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(81919..82185) Rahnella sp. Y9602 10216240 YP_004215823.1 CDS Rahaq_5130 NC_015063.1 82256 82588 D KEGG: ctu:Ctu_08840 hypothetical protein; hypothetical protein 82256..82588 Rahnella sp. Y9602 10216241 YP_004215824.1 CDS Rahaq_5131 NC_015063.1 82962 83939 R KEGG: ppf:Pput_5029 hypothetical protein; hypothetical protein complement(82962..83939) Rahnella sp. Y9602 10216242 YP_004215825.1 CDS Rahaq_5132 NC_015063.1 84295 87279 R PFAM: transposase Tn3 family protein; KEGG: ent:Ent638_4224 transposase Tn3 family protein; transposase Tn3 family protein complement(84295..87279) Rahnella sp. Y9602 10216243 YP_004215826.1 CDS Rahaq_5133 NC_015063.1 87440 88018 D PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: ent:Ent638_4223 resolvase domain-containing protein; resolvase 87440..88018 Rahnella sp. Y9602 10216244 YP_004215827.1 CDS Rahaq_5134 NC_015063.1 88271 89086 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: kpe:KPK_B0009 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 88271..89086 Rahnella sp. Y9602 10216245 YP_004215828.1 CDS Rahaq_5135 NC_015063.1 89116 89877 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: kpe:KPK_B0010 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 89116..89877 Rahnella sp. Y9602 10216246 YP_004215829.1 CDS Rahaq_5136 NC_015063.1 89920 91119 D PFAM: major facilitator superfamily MFS_1; KEGG: kpe:KPK_B0011 transporter, major facilitator family; major facilitator superfamily protein 89920..91119 Rahnella sp. Y9602 10216247 YP_004215830.1 CDS Rahaq_5137 NC_015063.1 91130 92065 D KEGG: kpe:KPK_B0012 AraC family transcriptional regulator; PFAM: ThiJ/PfpI domain-containing protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 91130..92065 Rahnella sp. Y9602 10216248 YP_004215831.1 CDS Rahaq_5138 NC_015063.1 92097 93005 R KEGG: kva:Kvar_0071 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(92097..93005) Rahnella sp. Y9602 10216249 YP_004215832.1 CDS Rahaq_5139 NC_015063.1 93127 93660 D KEGG: esa:ESA_01868 hypothetical protein; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; alkylhydroperoxidase 93127..93660 Rahnella sp. Y9602 10216250 YP_004215833.1 CDS Rahaq_5140 NC_015063.1 93872 95080 R PFAM: major facilitator superfamily MFS_1; KEGG: kpn:KPN_01739 MFS family transporter; major facilitator superfamily protein complement(93872..95080) Rahnella sp. Y9602 10216251 YP_004215834.1 CDS Rahaq_5141 NC_015063.1 95184 96101 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA3634 LysR family transcriptional regulator; LysR family transcriptional regulator 95184..96101 Rahnella sp. Y9602 10216252 YP_004215835.1 CDS Rahaq_5142 NC_015063.1 96300 97217 R KEGG: ebi:EbC_pEb10200220 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(96300..97217) Rahnella sp. Y9602 10216253 YP_004215836.1 CDS Rahaq_5143 NC_015063.1 97316 98383 D PFAM: aldo/keto reductase; KEGG: ebi:EbC_pEb10200230 aldo/keto reductase family protein; aldo/keto reductase 97316..98383 Rahnella sp. Y9602 10216254 YP_004215837.1 CDS Rahaq_5144 NC_015063.1 98611 99120 D PFAM: hypothetical protein; KEGG: dda:Dd703_2507 hypothetical protein; hypothetical protein 98611..99120 Rahnella sp. Y9602 10216255 YP_004215838.1 CDS Rahaq_5145 NC_015063.1 99224 99826 D PFAM: integrase; KEGG: ecc:c0291 hypothetical protein; integrase 99224..99826 Rahnella sp. Y9602 10216256 YP_004215839.1 CDS Rahaq_5146 NC_015063.1 100062 100622 D KEGG: ent:Ent638_3521 hypothetical protein; hypothetical protein 100062..100622 Rahnella sp. Y9602 10216257 YP_004215840.1 CDS Rahaq_5147 NC_015063.1 100552 100794 R hypothetical protein complement(100552..100794) Rahnella sp. Y9602 10216258 YP_004215841.1 CDS Rahaq_5148 NC_015063.1 101059 102132 D KEGG: avi:Avi_0566 hypothetical protein; hypothetical protein 101059..102132 Rahnella sp. Y9602 10216259 YP_004215842.1 CDS Rahaq_5149 NC_015063.1 102394 102846 D PFAM: transferase hexapeptide repeat containing protein; KEGG: ect:ECIAI39_4230 putative hexapeptide repeat acetyltransferase; transferase hexapeptide repeat containing protein 102394..102846 Rahnella sp. Y9602 10216260 YP_004215843.1 CDS Rahaq_5150 NC_015063.1 103228 103758 R PFAM: GCN5-related N-acetyltransferase; KEGG: kva:Kvar_2751 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(103228..103758) Rahnella sp. Y9602 10216261 YP_004215844.1 CDS Rahaq_5151 NC_015063.1 103958 104860 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebi:EbC_28550 LysR-family transcriptional regulator; LysR family transcriptional regulator complement(103958..104860) Rahnella sp. Y9602 10216262 YP_004215845.1 CDS Rahaq_5152 NC_015063.1 104951 105967 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pwa:Pecwa_2379 alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase 104951..105967 Rahnella sp. Y9602 10216263 YP_004215846.1 CDS Rahaq_5153 NC_015063.1 106030 106332 D KEGG: ddc:Dd586_1386 antibiotic biosynthesis monooxygenase; manually curated; PFAM: Antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 106030..106332 Rahnella sp. Y9602 10216264 YP_004215847.1 CDS Rahaq_5154 NC_015063.1 106520 106972 R PFAM: GCN5-related N-acetyltransferase; KEGG: ebi:EbC_27920 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(106520..106972) Rahnella sp. Y9602 10216265 YP_004215848.1 CDS Rahaq_5155 NC_015063.1 107198 107662 R PFAM: NUDIX hydrolase; KEGG: ctu:Ctu_1p00160 hypothetical protein; NUDIX hydrolase complement(107198..107662) Rahnella sp. Y9602 10216266 YP_004215849.1 CDS Rahaq_5156 NC_015063.1 107892 108722 R KEGG: bbt:BBta_0838 putative phenazine biosynthesis PhzC/PhzF protein; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; phenazine biosynthesis protein PhzF family protein complement(107892..108722) Rahnella sp. Y9602 10216267 YP_004215850.1 CDS Rahaq_5157 NC_015063.1 109432 110250 R KEGG: enc:ECL_A274 hypothetical protein; hypothetical protein complement(109432..110250) Rahnella sp. Y9602 10216268 YP_004215851.1 CDS Rahaq_5158 NC_015063.1 110371 111252 R KEGG: rpf:Rpic12D_5167 hypothetical protein; hypothetical protein complement(110371..111252) Rahnella sp. Y9602 10216269 YP_004215852.1 CDS Rahaq_5159 NC_015063.1 111368 111814 D KEGG: pay:PAU_02760 hypothetical protein; hypothetical protein 111368..111814 Rahnella sp. Y9602 10216270 YP_004215853.1 CDS Rahaq_5163 NC_015063.1 114127 114660 R KEGG: ctu:Ctu_1p00360 hypothetical protein; hypothetical protein complement(114127..114660) Rahnella sp. Y9602 10216298 YP_004215854.1 CDS Rahaq_5164 NC_015063.1 115084 115278 R KEGG: phu:Phum_PHUM040670 hypothetical protein; hypothetical protein complement(115084..115278) Rahnella sp. Y9602 10216272 YP_004215855.1 CDS Rahaq_5165 NC_015063.1 116114 116380 R manually curated; TIGRFAM: addiction module toxin, Txe/YoeB family; KEGG: cyt:cce_4261 putative addiction module toxin, Txe/YoeB; PFAM: Addiction module toxin Txe/YoeB; Txe/YoeB family addiction module toxin complement(116114..116380) Rahnella sp. Y9602 10216273 YP_004215856.1 CDS Rahaq_5166 NC_015063.1 116377 116622 R TIGRFAM: prevent-host-death family protein; KEGG: etr:ETAE_1621 prevent-host-death protein; prevent-host-death family protein complement(116377..116622) Rahnella sp. Y9602 10216274 YP_004215857.1 CDS Rahaq_5167 NC_015063.1 116866 118002 D PFAM: integrase; KEGG: pam:PANA_4063 Cre; integrase 116866..118002 Rahnella sp. Y9602 10216275 YP_004215858.1 CDS Rahaq_5168 NC_015063.1 118094 118573 R KEGG: eba:ebA2001 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(118094..118573) Rahnella sp. Y9602 10216276 YP_004215859.1 CDS Rahaq_5169 NC_015063.1 118570 118830 R PFAM: hypothetical protein; KEGG: neu:NE1104 hypothetical protein; hypothetical protein complement(118570..118830) Rahnella sp. Y9602 10216277 YP_004215860.1 CDS Rahaq_5171 NC_015063.1 119724 120332 R PFAM: abortive infection protein; KEGG: cko:CKO_01599 hypothetical protein; abortive infection protein complement(119724..120332) Rahnella sp. Y9602 10216299 YP_004215861.1 CDS Rahaq_5173 NC_015063.1 122223 123995 R KEGG: kpe:KPK_3392 cyclic diguanylate phosphodiesterase (EAL) domain protein; PFAM: EAL domain protein; GAF domain protein; SMART: EAL domain protein; GAF domain protein; diguanylate phosphodiesterase complement(122223..123995) Rahnella sp. Y9602 10216300 YP_004215862.1 CDS Rahaq_5174 NC_015063.1 124411 124848 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pam:PANA_1601 YaeR; glyoxalase/bleomycin resistance protein/dioxygenase 124411..124848 Rahnella sp. Y9602 10216280 YP_004215863.1 CDS Rahaq_5175 NC_015063.1 125367 125897 R KEGG: ctu:Ctu_1p00360 hypothetical protein; hypothetical protein complement(125367..125897) Rahnella sp. Y9602 10216281 YP_004215864.1 CDS Rahaq_5179 NC_015063.1 126949 127359 R PFAM: hypothetical protein; KEGG: bcm:Bcenmc03_6724 hypothetical protein; hypothetical protein complement(126949..127359) Rahnella sp. Y9602 10216303 YP_004215865.1 CDS Rahaq_5180 NC_015063.1 127388 128608 R PFAM: major facilitator superfamily MFS_1; KEGG: rle:pRL80047 major facilitator transporter; major facilitator superfamily protein complement(127388..128608) Rahnella sp. Y9602 10216283 YP_004215866.1 CDS Rahaq_5181 NC_015063.1 128714 129406 D PFAM: regulatory protein TetR; KEGG: rle:pRL80046 TetR family transcriptional regulatory protein; TetR family transcriptional regulator 128714..129406 Rahnella sp. Y9602 10216284 YP_004215867.1 CDS Rahaq_5182 NC_015063.1 129442 129831 D PFAM: 4-oxalocrotonate tautomerase; KEGG: bur:Bcep18194_C7514 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 129442..129831 Rahnella sp. Y9602 10216285 YP_004215868.1 CDS Rahaq_5183 NC_015063.1 129882 130178 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: ngk:NGK_0275 hypothetical protein; antibiotic biosynthesis monooxygenase 129882..130178 Rahnella sp. Y9602 10216286 YP_004215869.1 CDS Rahaq_5184 NC_015063.1 130233 131126 R PFAM: metallophosphoesterase; KEGG: bbt:BBta_1036 putative serine/threonine protein phosphatase; metallophosphoesterase complement(130233..131126) Rahnella sp. Y9602 10216287 YP_004215870.1 CDS Rahaq_5185 NC_015063.1 131123 132652 R PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: dfe:Dfer_5338 type I phosphodiesterase/nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase complement(131123..132652) Rahnella sp. Y9602 10216288 YP_004215871.1 CDS Rahaq_5186 NC_015063.1 132642 133457 R KEGG: mlo:mlr5891 transcription regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator complement(132642..133457) Rahnella sp. Y9602 10216289 Rahaq_R0001 tRNA Rahaq_R0001 NC_015061.1 87075 87151 D tRNA-Pro 87075..87151 Rahnella sp. Y9602 10211042 Rahaq_R0003 tRNA Rahaq_R0003 NC_015061.1 405424 405500 D tRNA-Ile 405424..405500 Rahnella sp. Y9602 10211344 Rahaq_R0004 tRNA Rahaq_R0004 NC_015061.1 405635 405710 D tRNA-Ala 405635..405710 Rahnella sp. Y9602 10211345 Rahaq_R0007 tRNA Rahaq_R0007 NC_015061.1 409113 409188 D tRNA-Thr 409113..409188 Rahnella sp. Y9602 10211348 Rahaq_R0009 tRNA Rahaq_R0009 NC_015061.1 424743 424818 R tRNA-Phe complement(424743..424818) Rahnella sp. Y9602 10211363 Rahaq_R0010 tRNA Rahaq_R0010 NC_015061.1 451312 451387 D tRNA-Gly 451312..451387 Rahnella sp. Y9602 10211389 Rahaq_R0011 tRNA Rahaq_R0011 NC_015061.1 451445 451520 D tRNA-Gly 451445..451520 Rahnella sp. Y9602 10211390 Rahaq_R0012 tRNA Rahaq_R0012 NC_015061.1 451582 451657 D tRNA-Gly 451582..451657 Rahnella sp. Y9602 10211391 Rahaq_R0013 tRNA Rahaq_R0013 NC_015061.1 517255 517341 D tRNA-Leu 517255..517341 Rahnella sp. Y9602 10211455 Rahaq_R0014 tRNA Rahaq_R0014 NC_015061.1 517401 517477 D tRNA-Met 517401..517477 Rahnella sp. Y9602 10211456 Rahaq_R0015 tRNA Rahaq_R0015 NC_015061.1 643005 643081 R tRNA-Met complement(643005..643081) Rahnella sp. Y9602 10211580 Rahaq_R0016 tRNA Rahaq_R0016 NC_015061.1 746451 746543 D tRNA-Ser 746451..746543 Rahnella sp. Y9602 10211670 Rahaq_R0017 tRNA Rahaq_R0017 NC_015061.1 746552 746628 D tRNA-Arg 746552..746628 Rahnella sp. Y9602 10211671 Rahaq_R0018 tRNA Rahaq_R0018 NC_015061.1 746739 746815 D tRNA-Arg 746739..746815 Rahnella sp. Y9602 10211672 Rahaq_R0019 tRNA Rahaq_R0019 NC_015061.1 746858 746934 D tRNA-Arg 746858..746934 Rahnella sp. Y9602 10211673 Rahaq_R0021 tRNA Rahaq_R0021 NC_015061.1 783533 783609 D tRNA-Ile 783533..783609 Rahnella sp. Y9602 10211717 Rahaq_R0022 tRNA Rahaq_R0022 NC_015061.1 783744 783819 D tRNA-Ala 783744..783819 Rahnella sp. Y9602 10211718 Rahaq_R0025 tRNA Rahaq_R0025 NC_015061.1 836249 836322 D tRNA-Gly 836249..836322 Rahnella sp. Y9602 10211767 Rahaq_R0026 tRNA Rahaq_R0026 NC_015061.1 905668 905744 R tRNA-Met complement(905668..905744) Rahnella sp. Y9602 10211827 Rahaq_R0027 tRNA Rahaq_R0027 NC_015061.1 905807 905883 R tRNA-Met complement(905807..905883) Rahnella sp. Y9602 10211828 Rahaq_R0029 tRNA Rahaq_R0029 NC_015061.1 961602 961677 D tRNA-Glu 961602..961677 Rahnella sp. Y9602 10211883 Rahaq_R0032 tRNA Rahaq_R0032 NC_015061.1 965121 965197 D tRNA-Asp 965121..965197 Rahnella sp. Y9602 10211886 Rahaq_R0033 tRNA Rahaq_R0033 NC_015061.1 990828 990904 D tRNA-Asp 990828..990904 Rahnella sp. Y9602 10211915 Rahaq_R0034 tRNA Rahaq_R0034 NC_015061.1 1033771 1033846 D tRNA-Thr 1033771..1033846 Rahnella sp. Y9602 10211958 Rahaq_R0035 tRNA Rahaq_R0035 NC_015061.1 1034073 1034148 D tRNA-Thr 1034073..1034148 Rahnella sp. Y9602 10211959 Rahaq_R0036 tRNA Rahaq_R0036 NC_015061.1 1197677 1197752 R tRNA-Lys complement(1197677..1197752) Rahnella sp. Y9602 10212113 Rahaq_R0037 tRNA Rahaq_R0037 NC_015061.1 1197760 1197835 R tRNA-Val complement(1197760..1197835) Rahnella sp. Y9602 10212114 Rahaq_R0038 tRNA Rahaq_R0038 NC_015061.1 1197879 1197954 R tRNA-Val complement(1197879..1197954) Rahnella sp. Y9602 10212115 Rahaq_R0039 tRNA Rahaq_R0039 NC_015061.1 1198001 1198076 R tRNA-Val complement(1198001..1198076) Rahnella sp. Y9602 10212116 Rahaq_R0040 tRNA Rahaq_R0040 NC_015061.1 1200991 1201066 D tRNA-Ala 1200991..1201066 Rahnella sp. Y9602 10212119 Rahaq_R0041 tRNA Rahaq_R0041 NC_015061.1 1201139 1201214 D tRNA-Ala 1201139..1201214 Rahnella sp. Y9602 10212120 Rahaq_R0042 tRNA Rahaq_R0042 NC_015061.1 1272358 1272432 R tRNA-Arg complement(1272358..1272432) Rahnella sp. Y9602 10212193 Rahaq_R0043 tRNA Rahaq_R0043 NC_015061.1 1713237 1713324 D tRNA-Ser 1713237..1713324 Rahnella sp. Y9602 10212566 Rahaq_R0044 tRNA Rahaq_R0044 NC_015061.1 1713520 1713607 D tRNA-Ser 1713520..1713607 Rahnella sp. Y9602 10212567 Rahaq_R0045 tRNA Rahaq_R0045 NC_015061.1 1812352 1812427 R tRNA-Asn complement(1812352..1812427) Rahnella sp. Y9602 10212665 Rahaq_R0046 tRNA Rahaq_R0046 NC_015061.1 1845129 1845218 R tRNA-Ser complement(1845129..1845218) Rahnella sp. Y9602 10212694 Rahaq_R0047 tRNA Rahaq_R0047 NC_015061.1 1845414 1845503 R tRNA-Ser complement(1845414..1845503) Rahnella sp. Y9602 10212695 Rahaq_R0048 tRNA Rahaq_R0048 NC_015061.1 2068519 2068594 R tRNA-Asn complement(2068519..2068594) Rahnella sp. Y9602 10212918 Rahaq_R0049 tRNA Rahaq_R0049 NC_015061.1 2885029 2885113 D tRNA-Tyr 2885029..2885113 Rahnella sp. Y9602 10213658 Rahaq_R0050 tRNA Rahaq_R0050 NC_015061.1 2915787 2915862 D tRNA-Asn 2915787..2915862 Rahnella sp. Y9602 10213686 Rahaq_R0051 tRNA Rahaq_R0051 NC_015061.1 3033334 3033410 D tRNA-Val 3033334..3033410 Rahnella sp. Y9602 10213799 Rahaq_R0052 tRNA Rahaq_R0052 NC_015061.1 3033440 3033516 D tRNA-Val 3033440..3033516 Rahnella sp. Y9602 10213800 Rahaq_R0053 tRNA Rahaq_R0053 NC_015061.1 3253216 3253301 R tRNA-Leu complement(3253216..3253301) Rahnella sp. Y9602 10214015 Rahaq_R0054 tRNA Rahaq_R0054 NC_015061.1 3253313 3253386 R tRNA-Cys complement(3253313..3253386) Rahnella sp. Y9602 10214016 Rahaq_R0055 tRNA Rahaq_R0055 NC_015061.1 3253445 3253520 R tRNA-Gly complement(3253445..3253520) Rahnella sp. Y9602 10214017 Rahaq_R0056 tRNA Rahaq_R0056 NC_015061.1 3261737 3261812 R tRNA-Lys complement(3261737..3261812) Rahnella sp. Y9602 10214027 Rahaq_R0057 tRNA Rahaq_R0057 NC_015061.1 3385936 3386011 R tRNA-Lys complement(3385936..3386011) Rahnella sp. Y9602 10214150 Rahaq_R0058 tRNA Rahaq_R0058 NC_015061.1 3386080 3386155 R tRNA-Lys complement(3386080..3386155) Rahnella sp. Y9602 10214151 Rahaq_R0059 tRNA Rahaq_R0059 NC_015061.1 3386359 3386434 R tRNA-Lys complement(3386359..3386434) Rahnella sp. Y9602 10214152 Rahaq_R0060 tRNA Rahaq_R0060 NC_015061.1 3451013 3451089 D tRNA-Met 3451013..3451089 Rahnella sp. Y9602 10214207 Rahaq_R0061 tRNA Rahaq_R0061 NC_015061.1 3451097 3451181 D tRNA-Leu 3451097..3451181 Rahnella sp. Y9602 10214208 Rahaq_R0062 tRNA Rahaq_R0062 NC_015061.1 3451205 3451279 D tRNA-Gln 3451205..3451279 Rahnella sp. Y9602 10214209 Rahaq_R0063 tRNA Rahaq_R0063 NC_015061.1 3451350 3451424 D tRNA-Gln 3451350..3451424 Rahnella sp. Y9602 10214210 Rahaq_R0064 tRNA Rahaq_R0064 NC_015061.1 3451517 3451593 D tRNA-Met 3451517..3451593 Rahnella sp. Y9602 10214211 Rahaq_R0065 tRNA Rahaq_R0065 NC_015061.1 3451638 3451712 D tRNA-Gln 3451638..3451712 Rahnella sp. Y9602 10214212 Rahaq_R0066 tRNA Rahaq_R0066 NC_015061.1 3510376 3510452 R tRNA-Arg complement(3510376..3510452) Rahnella sp. Y9602 10214268 Rahaq_R0070 tRNA Rahaq_R0070 NC_015061.1 3861346 3861421 D tRNA-Phe 3861346..3861421 Rahnella sp. Y9602 10214599 Rahaq_R0071 tRNA Rahaq_R0071 NC_015061.1 4182171 4182256 D tRNA-Leu 4182171..4182256 Rahnella sp. Y9602 10214867 Rahaq_R0072 tRNA Rahaq_R0072 NC_015061.1 4182293 4182378 D tRNA-Leu 4182293..4182378 Rahnella sp. Y9602 10214868 Rahaq_R0073 tRNA Rahaq_R0073 NC_015061.1 4182425 4182511 D tRNA-Leu 4182425..4182511 Rahnella sp. Y9602 10214869 Rahaq_R0074 tRNA Rahaq_R0074 NC_015061.1 4214472 4214556 R tRNA-Leu complement(4214472..4214556) Rahnella sp. Y9602 10214897 Rahaq_R0078 tRNA Rahaq_R0078 NC_015061.1 4486833 4486908 R tRNA-Glu complement(4486833..4486908) Rahnella sp. Y9602 10215153 Rahaq_R0080 tRNA Rahaq_R0080 NC_015061.1 4517255 4517330 R tRNA-Thr complement(4517255..4517330) Rahnella sp. Y9602 10215179 Rahaq_R0081 tRNA Rahaq_R0081 NC_015061.1 4517338 4517412 R tRNA-Gly complement(4517338..4517412) Rahnella sp. Y9602 10215180 Rahaq_R0082 tRNA Rahaq_R0082 NC_015061.1 4517543 4517627 R tRNA-Tyr complement(4517543..4517627) Rahnella sp. Y9602 10215181 Rahaq_R0083 tRNA Rahaq_R0083 NC_015061.1 4517647 4517722 R tRNA-Thr complement(4517647..4517722) Rahnella sp. Y9602 10215182 Rahaq_R0086 tRNA Rahaq_R0086 NC_015061.1 4525393 4525468 R tRNA-Glu complement(4525393..4525468) Rahnella sp. Y9602 10215189 Rahaq_R0088 tRNA Rahaq_R0088 NC_015061.1 4644451 4644527 R tRNA-Pro complement(4644451..4644527) Rahnella sp. Y9602 10215298 Rahaq_R0089 tRNA Rahaq_R0089 NC_015061.1 4644587 4644672 R tRNA-Leu complement(4644587..4644672) Rahnella sp. Y9602 10215299 Rahaq_R0090 tRNA Rahaq_R0090 NC_015061.1 4644702 4644777 R tRNA-His complement(4644702..4644777) Rahnella sp. Y9602 10215300 Rahaq_R0091 tRNA Rahaq_R0091 NC_015061.1 4644843 4644919 R tRNA-Arg complement(4644843..4644919) Rahnella sp. Y9602 10215301 Rahaq_R0092 tRNA Rahaq_R0092 NC_015061.1 4685395 4685470 R tRNA-Trp complement(4685395..4685470) Rahnella sp. Y9602 10215336 Rahaq_R0093 tRNA Rahaq_R0093 NC_015061.1 4685524 4685600 R tRNA-Asp complement(4685524..4685600) Rahnella sp. Y9602 10215337 Rahaq_R0096 tRNA Rahaq_R0096 NC_015061.1 4689056 4689131 R tRNA-Ala complement(4689056..4689131) Rahnella sp. Y9602 10215340 Rahaq_R0097 tRNA Rahaq_R0097 NC_015061.1 4689266 4689342 R tRNA-Ile complement(4689266..4689342) Rahnella sp. Y9602 10215341 Rahaq_R0101 tRNA Rahaq_R0101 NC_015061.1 4815278 4815353 R tRNA-Glu complement(4815278..4815353) Rahnella sp. Y9602 10215454 Rahaq_R0002 rRNA Rahaq_R0002 NC_015061.1 403818 405347 D 16S ribosomal RNA 403818..405347 Rahnella sp. Y9602 10211343 Rahaq_R0005 rRNA Rahaq_R0005 NC_015061.1 405927 408833 D 23S ribosomal RNA 405927..408833 Rahnella sp. Y9602 10211346 Rahaq_R0006 rRNA Rahaq_R0006 NC_015061.1 408947 409062 D 5S ribosomal RNA 408947..409062 Rahnella sp. Y9602 10211347 Rahaq_R0008 rRNA Rahaq_R0008 NC_015061.1 409225 409340 D 5S ribosomal RNA 409225..409340 Rahnella sp. Y9602 10211349 Rahaq_R0020 rRNA Rahaq_R0020 NC_015061.1 781926 783456 D 16S ribosomal RNA 781926..783456 Rahnella sp. Y9602 10211716 Rahaq_R0023 rRNA Rahaq_R0023 NC_015061.1 784036 786942 D 23S ribosomal RNA 784036..786942 Rahnella sp. Y9602 10211719 Rahaq_R0024 rRNA Rahaq_R0024 NC_015061.1 787056 787171 D 5S ribosomal RNA 787056..787171 Rahnella sp. Y9602 10211720 Rahaq_R0028 rRNA Rahaq_R0028 NC_015061.1 959924 961454 D 16S ribosomal RNA 959924..961454 Rahnella sp. Y9602 10211882 Rahaq_R0030 rRNA Rahaq_R0030 NC_015061.1 961898 964804 D 23S ribosomal RNA 961898..964804 Rahnella sp. Y9602 10211884 Rahaq_R0031 rRNA Rahaq_R0031 NC_015061.1 964918 965033 D 5S ribosomal RNA 964918..965033 Rahnella sp. Y9602 10211885 Rahaq_R0076 rRNA Rahaq_R0076 NC_015061.1 4483477 4483592 R 5S ribosomal RNA complement(4483477..4483592) Rahnella sp. Y9602 10215151 Rahaq_R0077 rRNA Rahaq_R0077 NC_015061.1 4483706 4486612 R 23S ribosomal RNA complement(4483706..4486612) Rahnella sp. Y9602 10215152 Rahaq_R0079 rRNA Rahaq_R0079 NC_015061.1 4487056 4488586 R 16S ribosomal RNA complement(4487056..4488586) Rahnella sp. Y9602 10215154 Rahaq_R0084 rRNA Rahaq_R0084 NC_015061.1 4522037 4522152 R 5S ribosomal RNA complement(4522037..4522152) Rahnella sp. Y9602 10215187 Rahaq_R0085 rRNA Rahaq_R0085 NC_015061.1 4522266 4525172 R 23S ribosomal RNA complement(4522266..4525172) Rahnella sp. Y9602 10215188 Rahaq_R0087 rRNA Rahaq_R0087 NC_015061.1 4525616 4527146 R 16S ribosomal RNA complement(4525616..4527146) Rahnella sp. Y9602 10215190 Rahaq_R0094 rRNA Rahaq_R0094 NC_015061.1 4685704 4685819 R 5S ribosomal RNA complement(4685704..4685819) Rahnella sp. Y9602 10215338 Rahaq_R0095 rRNA Rahaq_R0095 NC_015061.1 4685933 4688839 R 23S ribosomal RNA complement(4685933..4688839) Rahnella sp. Y9602 10215339 Rahaq_R0098 rRNA Rahaq_R0098 NC_015061.1 4689419 4690949 R 16S ribosomal RNA complement(4689419..4690949) Rahnella sp. Y9602 10215342 Rahaq_R0099 rRNA Rahaq_R0099 NC_015061.1 4811922 4812037 R 5S ribosomal RNA complement(4811922..4812037) Rahnella sp. Y9602 10215452 Rahaq_R0100 rRNA Rahaq_R0100 NC_015061.1 4812151 4815057 R 23S ribosomal RNA complement(4812151..4815057) Rahnella sp. Y9602 10215453 Rahaq_R0102 rRNA Rahaq_R0102 NC_015061.1 4815500 4817030 R 16S ribosomal RNA complement(4815500..4817030) Rahnella sp. Y9602 10215455