-- dump date 20140620_022900 -- class Genbank::CDS -- table cds_note -- id note YP_004210761.1 TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: spe:Spro_0032 chromosomal replication initiation protein; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase YP_004210762.1 SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III, subunit beta; KEGG: spe:Spro_0033 DNA polymerase III subunit beta; PFAM: DNA polymerase III beta chain YP_004210763.1 KEGG: spe:Spro_0034 recombination protein F; TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein YP_004210764.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA gyrase, B subunit; KEGG: spe:Spro_0035 DNA gyrase subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain-containing protein; DNA gyrase subunit B domain protein YP_004210765.1 KEGG: pwa:Pecwa_0012 sugar phosphatase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_004210766.1 KEGG: spe:Spro_0046 hypothetical protein YP_004210767.1 PFAM: protein of unknown function DUF1375; KEGG: pct:PC1_0033 hypothetical protein YP_004210768.1 PFAM: heat shock protein Hsp20; KEGG: ctu:Ctu_00530 heat shock protein IbpA YP_004210770.1 PFAM: heat shock protein Hsp20; KEGG: eca:ECA4402 heat shock chaperone IbpB YP_004210771.1 KEGG: mpn:MPN083 hypothetical protein YP_004210772.1 PFAM: aminotransferase class I and II; KEGG: ypi:YpsIP31758_4140 valine--pyruvate transaminase YP_004210773.1 KEGG: hde:HDEF_1127 hypothetical protein YP_004210774.1 KEGG: yen:YE4159 D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region YP_004210775.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_0058 major facilitator transporter YP_004210776.1 PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: spe:Spro_0060 xylose isomerase domain-containing protein YP_004210777.1 KEGG: spe:Spro_0061 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004210778.1 TIGRFAM: oligosaccharide/H+ symporter, major facilitator superfamily (MFS); KEGG: ent:Ent638_4076 galactoside permease YP_004210779.1 KEGG: ddc:Dd586_2554 glycoside hydrolase clan GH-D; PFAM: glycoside hydrolase clan GH-D YP_004210780.1 KEGG: ent:Ent638_4078 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_004210781.1 PFAM: OmpA/MotB domain protein; KEGG: spe:Spro_0062 outer membrane lipoprotein YP_004210782.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ypz:YPZ3_3495 acetyltransferase YP_004210783.1 TIGRFAM: DNA-3-methyladenine glycosylase I; KEGG: ypb:YPTS_4132 DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase YP_004210784.1 KEGG: spe:Spro_0065 outer membrane autotransporter; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; lipolytic protein G-D-S-L family YP_004210785.1 KEGG: sea:SeAg_B1618 stability protein StbD YP_004210786.1 KEGG: eic:NT01EI_2009 stability protein StbE; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system YP_004210787.1 TIGRFAM: glycyl-tRNA synthetase, subunit alpha; KEGG: eam:EAMY_3633 glycine tRNA synthetase, subunit alpha; PFAM: glycyl-tRNA synthetase subunit alpha YP_004210788.1 TIGRFAM: glycyl-tRNA synthetase, subunit beta; KEGG: yen:YE4150 glycyl-tRNA synthetase subunit beta YP_004210789.1 KEGG: spe:Spro_0071 hypothetical protein YP_004210790.1 PFAM: DSBA oxidoreductase; KEGG: ypp:YPDSF_4128 hypothetical protein YP_004210792.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: vcj:VCD_000629 deoxycytidylate deaminase-related protein YP_004210793.1 KEGG: spe:Spro_0072 PTS system mannitol-specific transporter subunit IIC; TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphotransferase system EIIC; phosphotransferase system lactose/cellobiose-specific IIB subunit YP_004210794.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: spe:Spro_0073 mannitol-1-phosphate 5-dehydrogenase YP_004210795.1 PFAM: Mannitol repressor; KEGG: spe:Spro_0074 mannitol repressor protein YP_004210796.1 KEGG: dze:Dd1591_1426 hypothetical protein YP_004210797.1 PFAM: lysine exporter protein (LYSE/YGGA); KEGG: yen:YE4145 inner membrane protein YP_004210798.1 KEGG: spe:Spro_0076 transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_004210799.1 KEGG: yen:YE4143 hypothetical protein YP_004210800.1 PFAM: MOSC domain containing protein; 3-alpha domain protein; KEGG: spe:Spro_0079 hypothetical protein YP_004210801.1 KEGG: spe:Spro_0080 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004210802.1 PFAM: Manganese/iron superoxide dismutase-like; KEGG: dda:Dd703_0072 superoxide dismutase YP_004210803.1 KEGG: ypy:YPK_0036 formate dehydrogenase accessory protein; TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD YP_004210804.1 KEGG: pay:PAU_00744 FdnG, subunit alpha of formate dehydrogenase-N; TIGRFAM: formate dehydrogenase, subunit alpha; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region YP_004210805.1 KEGG: spe:Spro_0085 formate dehydrogenase subunit beta; TIGRFAM: formate dehydrogenase, subunit beta; PFAM: Formate dehydrogenase transmembrane domain protein YP_004210806.1 TIGRFAM: formate dehydrogenase, subunit gamma; KEGG: ypy:YPK_0040 formate dehydrogenase-O subunit gamma YP_004210807.1 KEGG: ypb:YPTS_4153 formate dehydrogenase accessory protein FdhE; TIGRFAM: formate dehydrogenase accessory protein FdhE; PFAM: formate dehydrogenase accessory protein YP_004210808.1 PFAM: Glutathione S-transferase domain; KEGG: spe:Spro_0089 glutathione S-transferase YP_004210809.1 PFAM: Aldehyde Dehydrogenase; KEGG: ect:ECIAI39_4105 aldehyde dehydrogenase B YP_004210810.1 KEGG: spe:Spro_0092 major facilitator transporter; manually curated; PFAM: major facilitator superfamily MFS_1 YP_004210811.1 KEGG: ypy:YPK_0050 acyltransferase 3 YP_004210812.1 KEGG: vsp:VS_0293 hypothetical protein YP_004210813.1 KEGG: yen:YE4125 transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain-containing protein; SMART: Helix-turn-helix, AraC domain YP_004210814.1 PFAM: isochorismatase hydrolase; KEGG: yen:YE4124 isochorismatase family hydrolase YP_004210815.1 PFAM: ThiJ/PfpI domain-containing protein; KEGG: eca:ECA0102 hypothetical protein YP_004210816.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: dda:Dd703_0221 L-idonate 5-dehydrogenase YP_004210817.1 KEGG: yen:YE1971 membrane transporter; TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein YP_004210818.1 KEGG: yen:YE1970 DNA-binding protein; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein YP_004210819.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sgl:SG1755 acetyltransferase YP_004210820.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mmw:Mmwyl1_1878 GCN5-like N-acetyltransferase YP_004210821.1 KEGG: mea:Mex_1p4102 ABC transporter periplasmic protein YP_004210822.1 PFAM: Glutathione S-transferase domain; KEGG: yen:YE1848 transferase YP_004210823.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hch:HCH_01386 histone acetyltransferase HPA2-like acetyltransferase YP_004210824.1 PFAM: lysine exporter protein (LYSE/YGGA); KEGG: pct:PC1_4180 lysine exporter protein (LysE/YggA) YP_004210825.1 PFAM: protein of unknown function DUF1471; KEGG: spe:Spro_4435 hypothetical protein YP_004210826.1 PFAM: Transglycosylase-associated protein; KEGG: spe:Spro_3521 hypothetical protein YP_004210827.1 KEGG: pfl:PFL_2492 hypothetical protein YP_004210828.1 KEGG: afr:AFE_0010 hypothetical protein YP_004210829.1 TIGRFAM: urea ABC transporter ATP-binding protein UrtE; PFAM: ABC transporter related; KEGG: ebi:EbC_06330 ABC transporter subunit, ATP-binding subunit; SMART: AAA ATPase YP_004210830.1 KEGG: spe:Spro_1424 ABC transporter-related protein; TIGRFAM: urea ABC transporter ATP-binding protein UrtD; PFAM: ABC transporter related YP_004210831.1 KEGG: spe:Spro_1423 inner-membrane translocator; TIGRFAM: urea ABC transporter permease protein UrtC; PFAM: inner-membrane translocator YP_004210832.1 KEGG: spe:Spro_1422 inner-membrane translocator; TIGRFAM: urea ABC transporter permease protein UrtB; PFAM: inner-membrane translocator YP_004210833.1 KEGG: ebi:EbC_06370 ABC transporter subunit, substrate-binding (UrtA-like); TIGRFAM: urea ABC transporter urea binding protein; PFAM: Extracellular ligand-binding receptor YP_004210834.1 KEGG: spe:Spro_1420 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004210835.1 TIGRFAM: urea carboxylase; urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; Allophanate hydrolase subunit 1; biotin/lipoyl attachment domain-containing protein; KEGG: spe:Spro_1419 UreA carboxylase; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1 YP_004210836.1 KEGG: spe:Spro_1418 allophanate hydrolase; TIGRFAM: allophanate hydrolase; PFAM: Amidase YP_004210837.1 KEGG: ecm:EcSMS35_0821 RelB/DinJ family addiction module antitoxin YP_004210838.1 KEGG: rpi:Rpic_3179 addiction module toxin, RelE/StbE family; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system YP_004210839.1 KEGG: spe:Spro_0124 hypothetical protein YP_004210840.1 KEGG: spe:Spro_0129 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004210841.1 KEGG: spe:Spro_0130 OsmC family protein; TIGRFAM: peroxiredoxin, Ohr subfamily; PFAM: OsmC family protein YP_004210842.1 PFAM: sulfatase; protein of unknown function DUF1705; KEGG: spe:Spro_0131 phosphoethanolamine transferase YP_004210843.1 KEGG: psa:PST_3459 hypothetical protein YP_004210844.1 KEGG: amc:MADE_03514 HtaR suppressor protein; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein YP_004210845.1 PFAM: MmgE/PrpD family protein; KEGG: ebi:EbC_07520 MmgE/PrpD family protein YP_004210846.1 KEGG: ebi:EbC_07530 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase YP_004210847.1 KEGG: ebi:EbC_07540 oligopeptide transport ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004210848.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_07550 ABC transporter permease protein YP_004210849.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_07560 ABC transporter permease protein YP_004210850.1 PFAM: extracellular solute-binding protein family 5; KEGG: ebi:EbC_07570 ABC transporter periplasmic oligopeptide-binding protein YP_004210851.1 KEGG: ebi:EbC_07580 aminobenzoyl-glutamate utilization family protein; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004210852.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ebi:EbC_07590 transcriptional regulator, LysR family YP_004210853.1 PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE4083 periplasmic dipeptide transport protein YP_004210854.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE4082 dipeptide transporter permease DppB YP_004210855.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pct:PC1_0046 dipeptide transporter YP_004210856.1 TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: kpu:KP1_5242 dipeptide transporter ATP-binding subunit; SMART: AAA ATPase YP_004210857.1 TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: esa:ESA_04197 dipeptide transporter ATP-binding subunit; SMART: AAA ATPase YP_004210858.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ddd:Dda3937_00500 ISEch4 transposase YP_004210859.1 KEGG: vei:Veis_0004 mobile mystery protein B; TIGRFAM: mobile mystery protein B; PFAM: filamentation induced by cAMP protein Fic YP_004210860.1 TIGRFAM: mobile mystery protein A; PFAM: helix-turn-helix domain protein; KEGG: dap:Dacet_0535 transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein YP_004210861.1 PFAM: glycoside hydrolase family 8; KEGG: dze:Dd1591_4079 cellulase YP_004210862.1 KEGG: ddd:Dda3937_01993 hypothetical protein YP_004210863.1 PFAM: cellulose synthase operon C domain protein; KEGG: ebi:EbC_44000 cellulose synthase operon protein C YP_004210864.1 PFAM: Cellulose synthase BcsB; KEGG: ebi:EbC_44010 cellulose synthase operon protein B YP_004210865.1 KEGG: pam:PANA_0128 BcsA; TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ YP_004210866.1 TIGRFAM: cellulose synthase operon protein YhjQ; KEGG: ent:Ent638_3941 hypothetical protein YP_004210867.1 KEGG: ebi:EbC_44040 hypothetical protein YP_004210868.1 KEGG: spe:Spro_0152 phosphodiesterase; PFAM: EAL domain protein; histidine kinase HAMP region domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein YP_004210869.1 PFAM: sodium:dicarboxylate symporter; KEGG: yen:YE4067 C4-dicarboxylate transporter DctA YP_004210870.1 PFAM: peptidase M16 domain protein; KEGG: yen:YE4066 insulinase family protease YP_004210871.1 PFAM: PfkB domain protein; KEGG: yen:YE4065 2-dehydro-3-deoxygluconokinase YP_004210872.1 KEGG: ypi:YpsIP31758_4060 4-oxalocrotonate tautomerase; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase YP_004210873.1 KEGG: yen:YE4063 EAL domain-containing protein; PFAM: EAL domain protein; SMART: EAL domain protein YP_004210874.1 PFAM: AsmA family protein; KEGG: spe:Spro_4747 AsmA family protein YP_004210875.1 KEGG: spe:Spro_4746 CDP-diacylglycerol pyrophosphatase; PFAM: CDP-diacylglycerol pyrophosphatase YP_004210876.1 TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); KEGG: spe:Spro_4745 major facilitator superfamily metabolite/H(+) symporter YP_004210877.1 KEGG: spe:Spro_4744 ribonuclease; TIGRFAM: ribonuclease; PFAM: ribonuclease BN YP_004210878.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebi:EbC_01350 O-succinylbenzoate synthase YP_004210879.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebi:EbC_01360 short-chain dehydrogenase/reductase SDR YP_004210880.1 PFAM: YcgR family protein; type IV pilus assembly PilZ; KEGG: ypb:YPTS_0948 YcgR family protein YP_004210881.1 KEGG: pam:PANA_1606 YceJ YP_004210882.1 KEGG: spe:Spro_4454 TPR repeat-containing protein YP_004210883.1 KEGG: ent:Ent638_3117 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_004210884.1 KEGG: spe:Spro_4456 transmembrane anti-sigma factor YP_004210885.1 TIGRFAM: malate/quinone oxidoreductase; KEGG: enc:ECL_03512 malate:quinone oxidoreductase; PFAM: Malate:quinone-oxidoreductase YP_004210886.1 KEGG: kpn:KPN_03171 hypothetical protein YP_004210887.1 KEGG: ent:Ent638_2910 ImpA domain-containing protein YP_004210888.1 KEGG: ctu:Ctu_27030 hypothetical protein YP_004210889.1 PFAM: Protein of unknown function DUF2235; KEGG: ctu:Ctu_27040 hypothetical protein YP_004210890.1 TIGRFAM: malate/quinone oxidoreductase; KEGG: spe:Spro_1524 malate:quinone oxidoreductase; PFAM: Malate:quinone-oxidoreductase YP_004210891.1 PFAM: amino acid permease-associated region; KEGG: spe:Spro_1975 amino acid permease-associated region YP_004210892.1 PFAM: Conserved hypothetical protein CHP00022; KEGG: spe:Spro_1974 cryptic beta-D-galactosidase subunit beta YP_004210893.1 PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 42 domain 5 loop region; KEGG: spe:Spro_1973 cryptic beta-D-galactosidase subunit alpha YP_004210894.1 KEGG: spe:Spro_1972 DNA-binding transcriptional repressor EbgR; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_004210895.1 KEGG: spe:Spro_1971 hypothetical protein YP_004210896.1 KEGG: spe:Spro_1970 glycosyl hydrolase YP_004210897.1 KEGG: pfl:PFL_0539 hydroxymethylpyrimidine transporter CytX; TIGRFAM: hydroxymethylpyrimidine transporter CytX; PFAM: permease for cytosine/purines uracil thiamine allantoin YP_004210898.1 KEGG: ddd:Dda3937_01264 hypothetical protein YP_004210899.1 KEGG: spe:Spro_2306 peptidyl-dipeptidase DCP; PFAM: peptidase M3A and M3B thimet/oligopeptidase F YP_004210900.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; Ada metal-binding domain-containing protein; KEGG: dda:Dd703_0019 methylated-DNA/protein-cysteine methyltransferase; SMART: Helix-turn-helix, AraC domain YP_004210901.1 KEGG: sme:SMc01727 hypothetical protein YP_004210902.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_1571 major facilitator transporter YP_004210904.1 PFAM: protein of unknown function DUF450; KEGG: pmy:Pmen_3692 hypothetical protein YP_004210905.1 PFAM: regulatory protein TetR; KEGG: spe:Spro_2481 TetR family transcriptional regulator YP_004210906.1 KEGG: spe:Spro_2480 EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004210907.1 KEGG: ebi:EbC_43270 ABC transporter ATP-binding protein/permease protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004210908.1 PFAM: protein of unknown function DUF482; KEGG: ebi:EbC_43250 conserved uncharacterized protein YP_004210909.1 KEGG: pen:PSEEN3600 carbonic anhydrase; PFAM: carbonic anhydrase YP_004210910.1 TIGRFAM: peptide methionine sulfoxide reductase; KEGG: pam:PANA_2239 MsrA; PFAM: methionine sulfoxide reductase A YP_004210911.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: ara:Arad_4160 4-oxalocrotonate tautomerase protein YP_004210912.1 KEGG: ebi:EbC_37830 hypothetical protein YP_004210913.1 KEGG: ebi:EbC_37840 PTS system, mannitol-specific EIIC component YP_004210914.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: ebi:EbC_37850 PTS system, mannitol-specific EIIB component YP_004210915.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: ebi:EbC_37870 PTS system, mannitol-specific EIIA component YP_004210916.1 KEGG: ebi:EbC_37880 glucokinase YP_004210917.1 PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: ebi:EbC_37890 tagatose-1,6-bisphosphate aldolase YP_004210918.1 PFAM: sugar-binding domain-containing protein; regulatory protein MarR; KEGG: ebi:EbC_37900 transcriptional regulator YP_004210919.1 KEGG: ebi:EbC_38620 hypothetical protein YP_004210920.1 PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; KEGG: ent:Ent638_0982 peptidylprolyl isomerase, FKBP-type YP_004210921.1 PFAM: alpha/beta hydrolase fold; KEGG: epy:EpC_35350 hydrolase, alpha/beta fold family YP_004210922.1 PFAM: isochorismatase hydrolase; KEGG: kva:Kvar_4035 isochorismatase hydrolase YP_004210923.1 PFAM: DoxX family protein; KEGG: cti:RALTA_B0391 conserved hypothetical protein; membrane protein, DoxX domain YP_004210924.1 PFAM: protein of unknown function DUF894 DitE; KEGG: vap:Vapar_5468 protein of unknown function DUF894 DitE YP_004210925.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebd:ECBD_1642 transcriptional regulator, LysR family YP_004210926.1 KEGG: kpu:KP1_1209 transport protein YP_004210927.1 KEGG: ebi:EbC_18640 excinuclease cho; PFAM: Excinuclease ABC C subunit domain protein; SMART: Excinuclease ABC C subunit domain protein YP_004210928.1 KEGG: epy:EpC_05510 conserved uncharacterized protein YP_004210929.1 KEGG: spe:Spro_4714 glutathione reductase; TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_004210930.1 PFAM: protein of unknown function DUF519; KEGG: spe:Spro_4713 hypothetical protein YP_004210931.1 KEGG: spe:Spro_4701 oligopeptidase A; PFAM: peptidase M3A and M3B thimet/oligopeptidase F YP_004210932.1 PFAM: protein of unknown function DUF548; KEGG: spe:Spro_4700 methyltransferase YP_004210933.1 PFAM: UspA domain-containing protein; KEGG: spe:Spro_4691 UspA domain-containing protein YP_004210934.1 PFAM: Universal stress protein B; KEGG: spe:Spro_4690 universal stress protein UspB YP_004210935.1 PFAM: phosphate transporter; KEGG: spe:Spro_4689 phosphate transporter YP_004210936.1 PFAM: HI0933 family protein; KEGG: ypb:YPTS_4023 hypothetical protein YP_004210937.1 KEGG: dda:Dd703_2588 hypothetical protein YP_004210938.1 KEGG: pct:PC1_3039 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004210939.1 KEGG: dan:Dana_GF19434 GF19434 gene product from transcript GF19434-RA YP_004210940.1 PFAM: beta-lactamase; KEGG: eca:ECA0077 hypothetical protein YP_004210941.1 KEGG: ebi:EbC_38020 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_004210942.1 PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_0088 major facilitator superfamily transporter YP_004210943.1 PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_4654 GCN5-related N-acetyltransferase YP_004210944.1 KEGG: cpy:Cphy_0396 hypothetical protein YP_004210945.1 KEGG: cpy:Cphy_0396 hypothetical protein YP_004210946.1 PFAM: Pirin domain protein; KEGG: yen:YE4023 hypothetical protein YP_004210947.1 KEGG: yen:YE4059 autotransporter protein; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; Pertactin YP_004210948.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: asa:ASA_0480 PTS system cellobiose-specific IIB component YP_004210949.1 TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; KEGG: pwa:Pecwa_0034 PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC YP_004210950.1 KEGG: pct:PC1_0030 beta-glucosidase; PFAM: glycoside hydrolase family 1 YP_004210951.1 KEGG: yen:YE1295 LacI family transcriptional regulatory protein; PFAM: regulatory protein LacI; SMART: regulatory protein LacI YP_004210952.1 KEGG: spe:Spro_4652 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004210953.1 TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; KEGG: pct:PC1_3943 carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase YP_004210954.1 KEGG: yen:YE4021 gluconate permease; TIGRFAM: gluconate transporter; PFAM: gluconate transporter YP_004210955.1 KEGG: plu:plu3981 hypothetical protein YP_004210956.1 KEGG: cko:CKO_04948 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004210957.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: eca:ECA4157 dITP- and XTP- hydrolase YP_004210958.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; KEGG: yen:YE4018 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding YP_004210959.1 TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; KEGG: spe:Spro_4647 glycogen branching enzyme; SMART: alpha amylase catalytic sub domain YP_004210960.1 TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; KEGG: spe:Spro_4646 glycogen debranching enzyme; SMART: alpha amylase catalytic sub domain YP_004210961.1 KEGG: spe:Spro_4645 glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase YP_004210962.1 TIGRFAM: glycogen/starch synthase, ADP-glucose type; KEGG: spe:Spro_4644 glycogen synthase; PFAM: Starch synthase catalytic domain-containing protein; glycosyl transferase group 1 YP_004210963.1 TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; KEGG: ypg:YpAngola_A4122 glycogen phosphorylase; PFAM: glycosyl transferase family 35 YP_004210964.1 KEGG: spe:Spro_4642 glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase YP_004210965.1 KEGG: yen:YE3987 DNA-binding transcriptional repressor GlpR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004210966.1 KEGG: yen:YE3988 intramembrane serine protease GlpG; PFAM: Rhomboid family protein YP_004210967.1 PFAM: HipA domain protein; KEGG: bam:Bamb_5437 HipA domain-containing protein YP_004210968.1 manually curated; PFAM: helix-turn-helix domain protein; KEGG: ecc:c5295 hypothetical protein; SMART: helix-turn-helix domain protein YP_004210969.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: tra:Trad_2517 Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_004210970.1 PFAM: Rhodanese domain protein; KEGG: ebi:EbC_42170 thiosulfate sulfurtransferase; SMART: Rhodanese domain protein YP_004210971.1 KEGG: enc:ECL_00585 transcriptional repressor UlaR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004210972.1 KEGG: kva:Kvar_4669 enzyme with metallo-hydrolase domain protein YP_004210973.1 KEGG: set:SEN4149 PTS system ascorbate-specific transporter subunit IIC YP_004210974.1 KEGG: sbc:SbBS512_E4724 PTS system L-ascorbate-specific transporter subunit IIB; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit YP_004210975.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: set:SEN4151 PTS system L-ascorbate-specific transporter subunit IIA YP_004210976.1 PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: ecz:ECS88_4782 3-keto-L-gulonate-6-phosphate decarboxylase YP_004210977.1 TIGRFAM: hexulose-6-phosphate isomerase; KEGG: seh:SeHA_C4805 L-xylulose 5-phosphate 3-epimerase; PFAM: Xylose isomerase domain-containing protein TIM barrel YP_004210978.1 PFAM: class II aldolase/adducin family protein; KEGG: sea:SeAg_B4666 L-ribulose-5-phosphate 4-epimerase YP_004210979.1 KEGG: cfl:Cfla_3242 major facilitator superfamily MFS_1 YP_004210980.1 KEGG: spe:Spro_4636 glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_004210981.1 TIGRFAM: 4-alpha-glucanotransferase; KEGG: yen:YE3992 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77 YP_004210982.1 KEGG: eay:EAM_3259 Fe-S protein; TIGRFAM: IscR-regulated protein YhgI; PFAM: HesB/YadR/YfhF-family protein; nitrogen-fixing NifU domain protein YP_004210983.1 PFAM: phosphoribosyltransferase; KEGG: spe:Spro_4633 gluconate periplasmic binding protein YP_004210984.1 KEGG: spe:Spro_4632 BioH protein; TIGRFAM: bioH protein; PFAM: alpha/beta hydrolase fold YP_004210985.1 PFAM: protein of unknown function DUF1471; KEGG: yen:YE3996 hypothetical protein YP_004210986.1 TIGRFAM: malonate decarboxylase, subunit alpha; KEGG: enc:ECL_04727 malonate decarboxylase, subunit alpha YP_004210987.1 TIGRFAM: triphosphoribosyl-dephospho-CoA synthase MdcB; KEGG: kpn:KPN_01562 triphosphoribosyl-dephospho-CoA transferase; PFAM: triphosphoribosyl-dephospho-CoA protein YP_004210988.1 KEGG: kpu:KP1_2579 malonate decarboxylase subunit delta; TIGRFAM: malonate decarboxylase acyl carrier protein; PFAM: malonate decarboxylase subunit delta YP_004210989.1 TIGRFAM: malonate decarboxylase, subunit beta; KEGG: cro:ROD_44601 malonate decarboxylase subunit beta MdcD YP_004210990.1 KEGG: dda:Dd703_1243 malonate decarboxylase, subunit gamma; TIGRFAM: malonate decarboxylase, subunit gamma; PFAM: malonate decarboxylase subunit gamma YP_004210991.1 KEGG: cko:CKO_04764 hypothetical protein; TIGRFAM: auxin efflux carrier; PFAM: Auxin Efflux Carrier YP_004210992.1 TIGRFAM: holo-ACP synthase, malonate decarboxylase-specific; KEGG: ctu:Ctu_35010 phosphoribosyl-dephospho-CoA transferase; PFAM: Holo-ACP synthase, malonate decarboxylase-specific YP_004210993.1 KEGG: dda:Dd703_1240 malonate decarboxylase, subunit epsilon; TIGRFAM: malonate decarboxylase, subunit epsilon; PFAM: Acyl transferase YP_004210994.1 KEGG: cro:ROD_27521 hypothetical protein YP_004210995.1 KEGG: nwi:Nwi_1574 hypothetical protein YP_004210996.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: enc:ECL_04719 LysR family transcriptional regulator YP_004210997.1 PFAM: protein of unknown function DUF1920; KEGG: yen:YE3997 hypothetical protein YP_004210998.1 KEGG: yen:YE3998 ferrous iron transport protein B; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B domain-containing protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain-containing protein YP_004210999.1 PFAM: FeoA family protein; KEGG: yen:YE3999 ferrous iron transport protein A YP_004211000.1 KEGG: eok:G2583_4104 protein YhgF; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold YP_004211001.1 KEGG: kpu:KP1_5107 transcription elongation factor GreB; TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain-containing protein YP_004211002.1 PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: ypz:YPZ3_2273 membrane protein YP_004211003.1 KEGG: ypy:YPK_3054 penicillin-binding protein 1C; TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein YP_004211004.1 KEGG: eok:G2583_3869 fimbrial protein YP_004211005.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: ecy:ECSE_3430 fimbrial usher protein YP_004211006.1 PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: esa:ESA_02344 hypothetical protein YP_004211007.1 PFAM: Fimbrial protein domain-containing protein; KEGG: ebw:BWG_2846 fimbrial-like adhesin protein YP_004211009.1 KEGG: spe:Spro_4621 osmolarity response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004211010.1 KEGG: yen:YE4005 osmolarity sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004211011.1 KEGG: spe:Spro_4619 PilT domain-containing protein YP_004211012.1 KEGG: spe:Spro_4618 hypothetical protein YP_004211013.1 TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); KEGG: esa:ESA_04336 phosphoenolpyruvate carboxykinase; PFAM: phosphoenolpyruvate carboxykinase (ATP) YP_004211014.1 PFAM: Hsp33 protein; KEGG: ypb:YPTS_3957 HSP33-like chaperonin YP_004211015.1 KEGG: spe:Spro_4615 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_004211016.1 KEGG: spe:Spro_4614 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004211017.1 PFAM: Intracellular growth attenuator IgaA; KEGG: spe:Spro_4613 intracellular growth attenuator IgaA YP_004211019.1 PFAM: NUDIX hydrolase; KEGG: spe:Spro_4612 ADP-ribose diphosphatase NudE YP_004211020.1 TIGRFAM: penicillin-binding protein, 1A family; KEGG: yen:YE3979 peptidoglycan synthetase; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_004211021.1 KEGG: ddc:Dd586_3806 hypothetical protein YP_004211022.1 PFAM: Fimbrial assembly family protein; KEGG: spe:Spro_4609 fimbrial assembly family protein YP_004211023.1 KEGG: pam:PANA_3670 hypothetical protein YP_004211024.1 KEGG: pwa:Pecwa_4062 outer membrane porin HofQ; TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain YP_004211025.1 KEGG: sgl:SG2309 shikimate kinase I; PFAM: shikimate kinase YP_004211026.1 TIGRFAM: 3-dehydroquinate synthase; KEGG: spe:Spro_4604 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase YP_004211027.1 PFAM: Sporulation domain-containing protein; KEGG: spe:Spro_4603 hypothetical protein YP_004211028.1 KEGG: ypb:YPTS_3942 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase YP_004211029.1 TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: kva:Kvar_0344 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase YP_004211030.1 KEGG: yen:YE3970 phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004211031.1 TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: pwa:Pecwa_4054 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_004211032.1 KEGG: ypb:YPTS_3938 siroheme synthase; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Sirohaem synthase, dimerisation domain YP_004211033.1 KEGG: ypb:YPTS_3936 nitrite reductase small subunit; TIGRFAM: nitrite reductase [NAD(P)H], small subunit YP_004211034.1 KEGG: spe:Spro_4595 nitrite reductase (NAD(P)H), large subunit; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region YP_004211035.1 KEGG: spe:Spro_4594 cytosine deaminase; PFAM: Amidohydrolase 3 YP_004211036.1 KEGG: spe:Spro_4589 peptidyl-prolyl cis-trans isomerase A (rotamase A); PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type YP_004211037.1 PFAM: protein of unknown function DUF853 NPT hydrolase; KEGG: spe:Spro_4584 hypothetical protein YP_004211038.1 KEGG: eca:ECA4385 hypothetical protein YP_004211039.1 KEGG: esa:ESA_04371 hypothetical protein YP_004211040.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: ent:Ent638_3788 cell filamentation protein Fic YP_004211041.1 KEGG: yen:YE3958 para-aminobenzoate synthase component II; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I YP_004211042.1 KEGG: ypy:YPK_0245 bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; TIGRFAM: succinylornithine transaminase family; acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III YP_004211043.1 TIGRFAM: integral membrane protein, YccS/YhfK family; KEGG: spe:Spro_4581 YccS/YhfK family integral membrane protein YP_004211044.1 KEGG: ebi:EbC_41710 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_004211045.1 PFAM: OsmC family protein; KEGG: spe:Spro_4579 hypothetical protein YP_004211046.1 KEGG: spe:Spro_4578 phosphoribulokinase YP_004211047.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cko:CKO_04286 DNA-binding transcriptional activator AllS YP_004211048.1 KEGG: kpu:KP1_1359 ureidoglycolate hydrolase; PFAM: Ureidoglycolate hydrolase YP_004211049.1 KEGG: ecy:ECSE_0532 DNA-binding transcriptional repressor AllR; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_004211050.1 KEGG: eck:EC55989_0522 glyoxylate carboligase; TIGRFAM: glyoxylate carboligase; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein YP_004211051.1 TIGRFAM: hydroxypyruvate isomerase; KEGG: ecl:EcolC_3114 hydroxypyruvate isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel YP_004211052.1 TIGRFAM: 2-hydroxy-3-oxopropionate reductase; KEGG: ecc:c0624 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_004211053.1 KEGG: sed:SeD_A0570 allantoin permease; TIGRFAM: NCS1 nucleoside transporter family; PFAM: permease for cytosine/purines uracil thiamine allantoin YP_004211054.1 KEGG: kpu:KP1_1367 allantoinase; TIGRFAM: allantoinase; PFAM: amidohydrolase YP_004211055.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: kpu:KP1_1368 purine permease YbbY YP_004211056.1 TIGRFAM: glycerate kinase; KEGG: sea:SeAg_B0571 glycerate kinase II; PFAM: glycerate kinase YP_004211057.1 KEGG: ecw:EcE24377A_0553 hypothetical protein; TIGRFAM: allantoin catabolism protein; PFAM: Cupin 2 conserved barrel domain protein; protein of unknown function DUF861 cupin_3 YP_004211058.1 TIGRFAM: allantoate amidohydrolase; amidase, hydantoinase/carbamoylase family; KEGG: kpu:KP1_1372 allantoate amidohydrolase; PFAM: peptidase M20 YP_004211059.1 KEGG: kpu:KP1_1373 malate dehydrogenase; TIGRFAM: ureidoglycolate dehydrogenase; PFAM: Malate/L-lactate dehydrogenase YP_004211060.1 KEGG: eok:G2583_0638 bacterial FdrA protein YP_004211061.1 PFAM: protein of unknown function DUF1116; KEGG: set:SEN0511 hypothetical protein YP_004211062.1 KEGG: sbc:SbBS512_E0454 hypothetical protein YP_004211063.1 TIGRFAM: carbamate kinase; KEGG: eum:ECUMN_0561 carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_004211064.1 PFAM: protein of unknown function UPF0270; KEGG: spe:Spro_4577 hypothetical protein YP_004211065.1 PFAM: alpha/beta hydrolase fold; KEGG: ypb:YPTS_3916 hydrolase YP_004211066.1 PFAM: lysine exporter protein (LYSE/YGGA); KEGG: yen:YE3950 ABC-transport protein YP_004211067.1 KEGG: yen:YE3942 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004211068.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: spe:Spro_4561 glutathione-regulated potassium-efflux system ancillary protein KefG YP_004211069.1 KEGG: yen:YE3940 glutathione-regulated potassium-efflux system protein KefB; TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein YP_004211070.1 PFAM: Conserved hypothetical protein CHP02443; KEGG: spe:Spro_4559 hypothetical protein YP_004211071.1 KEGG: spe:Spro_4558 FKBP-type peptidyl-prolyl cis-trans isomerase; PFAM: peptidylprolyl isomerase FKBP-type YP_004211072.1 PFAM: SlyX family protein; KEGG: ypb:YPTS_3903 hypothetical protein YP_004211073.1 KEGG: spe:Spro_4556 FKBP-type peptidyl-prolyl cis-trans isomerase; PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type YP_004211074.1 PFAM: YheO-like domain-containing protein; KEGG: yen:YE3934 DNA-binding protein YP_004211075.1 KEGG: ypb:YPTS_3900 sulfur transfer complex subunit TusD; TIGRFAM: sulfur relay protein TusD/DsrE; PFAM: DsrE family protein YP_004211076.1 KEGG: ddc:Dd586_3745 sulfur relay protein TusC/DsrF; TIGRFAM: sulfur relay protein TusC/DsrF; PFAM: DsrE family protein YP_004211077.1 KEGG: yen:YE3931 sulfur transfer complex subunit TusB; TIGRFAM: sulfur relay protein TusB/DsrH; PFAM: DsrH family protein YP_004211078.1 KEGG: dze:Dd1591_0316 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23 YP_004211079.1 KEGG: pwa:Pecwa_4008 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7 YP_004211080.1 KEGG: spe:Spro_4549 elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein YP_004211081.1 KEGG: spe:Spro_4548 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein YP_004211082.1 KEGG: enc:ECL_04701 bacterioferritin-associated ferredoxin; manually curated; PFAM: BFD domain protein [2Fe-2S]-binding domain protein YP_004211083.1 KEGG: ctu:Ctu_38500 bacterioferritin; TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein YP_004211084.1 KEGG: psp:PSPPH_0818 type IV pilus prepilin peptidase PilD; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV YP_004211085.1 PFAM: General secretion pathway M protein; KEGG: ppr:PBPRA3472 general secretion pathway protein M YP_004211086.1 KEGG: cko:CKO_02220 hypothetical protein; TIGRFAM: general secretion pathway protein L; PFAM: General secretion pathway L YP_004211087.1 KEGG: ecz:ECS88_3720 general secretory pathway component, cryptic YP_004211088.1 TIGRFAM: general secretion pathway protein J; KEGG: tau:Tola_0361 general secretion pathway protein J YP_004211089.1 KEGG: enc:ECL_02793 general secretion pathway protein I; TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J YP_004211090.1 TIGRFAM: general secretion pathway protein H; KEGG: enc:ECL_02794 general secretion pathway protein H YP_004211091.1 KEGG: enc:ECL_02795 general secretion pathway protein G; TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G YP_004211092.1 KEGG: ecz:ECS88_3715 general secretory pathway component, cryptic; TIGRFAM: general secretion pathway protein F; PFAM: Type II secretion system F domain YP_004211093.1 TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; KEGG: enc:ECL_02797 general secretion pathway protein E; SMART: AAA ATPase YP_004211094.1 KEGG: cro:ROD_44971 T2SS protein D; TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein YP_004211095.1 KEGG: enc:ECL_02799 general secretion pathway protein C YP_004211096.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: cko:CKO_02233 hypothetical protein YP_004211097.1 KEGG: pop:POPTR_785446 hypothetical protein YP_004211098.1 KEGG: ent:Ent638_3752 SSU ribosomal protein S10P; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10 YP_004211099.1 KEGG: spe:Spro_4544 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3 YP_004211100.1 PFAM: ribosomal protein L4/L1e; KEGG: spe:Spro_4543 50S ribosomal protein L4 YP_004211101.1 PFAM: Ribosomal protein L25/L23; KEGG: yen:YE3921 50S ribosomal protein L23 YP_004211102.1 KEGG: ypb:YPTS_3887 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2 YP_004211103.1 KEGG: pwa:Pecwa_3997 30S ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15 YP_004211104.1 KEGG: spe:Spro_4539 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17 YP_004211105.1 TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; KEGG: kva:Kvar_0389 ribosomal protein S3; SMART: KH domain protein YP_004211106.1 KEGG: ctu:Ctu_38400 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L10e/L16 YP_004211107.1 KEGG: ctu:Ctu_38390 50S ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29 YP_004211108.1 KEGG: etr:ETAE_3221 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17 YP_004211109.1 KEGG: spe:Spro_4534 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e YP_004211110.1 TIGRFAM: ribosomal protein L24; KEGG: ebi:EbC_41190 50S ribosomal protein L24 YP_004211111.1 KEGG: etr:ETAE_3218 50S ribosomal protein L5 YP_004211112.1 PFAM: ribosomal protein S14; KEGG: pwa:Pecwa_3988 30S ribosomal protein S14 YP_004211113.1 PFAM: ribosomal protein S8; KEGG: etr:ETAE_3216 30S ribosomal protein S8 YP_004211114.1 KEGG: ypb:YPTS_3875 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain YP_004211115.1 KEGG: ent:Ent638_3735 50S ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E YP_004211116.1 KEGG: pwa:Pecwa_3984 30S ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: ribosomal protein S5 domain protein; Ribosomal protein S5 YP_004211117.1 KEGG: spe:Spro_4526 50S ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30 YP_004211118.1 TIGRFAM: ribosomal protein L15; KEGG: ypb:YPTS_3871 50S ribosomal protein L15 YP_004211119.1 KEGG: spe:Spro_4524 preprotein translocase subunit SecY; TIGRFAM: preprotein translocase SecY subunit; PFAM: SecY protein YP_004211120.1 KEGG: sgl:SG2257 50S ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36 YP_004211121.1 KEGG: yen:YE3901 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13 YP_004211122.1 KEGG: spe:Spro_4521 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11 YP_004211123.1 TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: ddd:Dda3937_01514 30S ribosomal subunit protein S4; SMART: RNA-binding S4 domain protein YP_004211124.1 TIGRFAM: DNA-directed RNA polymerase, subunit alpha; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase subunit alpha domain protein; KEGG: spe:Spro_4519 DNA-directed RNA polymerase subunit alpha; SMART: RNA polymerase RpoA/D/Rpb3-type YP_004211125.1 KEGG: spe:Spro_4518 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17 YP_004211126.1 PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; KEGG: kpu:KP1_5012 hypothetical protein YP_004211127.1 TIGRFAM: Zn(II)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: spe:Spro_4517 zinc-responsive transcriptional regulator; SMART: regulatory protein MerR YP_004211128.1 PFAM: protein of unknown function DUF331; KEGG: xne:XNC1_0346 hypothetical protein YP_004211129.1 KEGG: spe:Spro_4515 large-conductance mechanosensitive channel; TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel YP_004211130.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: spe:Spro_4514 potassium transporter peripheral membrane component YP_004211131.1 KEGG: spe:Spro_4513 16S rRNA methyltransferase B; TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44 YP_004211132.1 TIGRFAM: methionyl-tRNA formyltransferase; KEGG: yen:YE3890 methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein YP_004211133.1 KEGG: yen:YE3889 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_004211134.1 KEGG: dda:Dd703_0440 DNA protecting protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein YP_004211135.1 PFAM: protein of unknown function DUF494; KEGG: spe:Spro_4509 hypothetical protein YP_004211136.1 PFAM: DNA topoisomerase type IA zn finger domain protein; KEGG: yen:YE3886 DNA-binding protein YP_004211137.1 PFAM: SUA5/yciO/yrdC domain; KEGG: eca:ECA3996 DNA topoisomerase YP_004211138.1 KEGG: yen:YE3884 shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase YP_004211139.1 KEGG: ebi:EbC_40910 transferase YP_004211140.1 KEGG: spe:Spro_0295 acetate permease; TIGRFAM: cation/acetate symporter ActP; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter YP_004211141.1 PFAM: protein of unknown function DUF485; KEGG: yen:YE0308 hypothetical protein YP_004211142.1 KEGG: spe:Spro_0297 acetyl-CoA synthetase; TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_004211143.1 PFAM: Fimbrial protein domain-containing protein; KEGG: ypi:YpsIP31758_4107 fimbrial protein YP_004211144.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: yps:YPTB3895 outer membrane fimbrial usher porin YP_004211145.1 PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: ypb:YPTS_4111 pili assembly chaperone, N-terminal YP_004211146.1 KEGG: ypi:YpsIP31758_4104 hypothetical protein YP_004211147.1 KEGG: plu:plu0900 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004211148.1 KEGG: pfh:PFHG_01390 conserved hypothetical protein YP_004211149.1 PFAM: transcriptional regulator domain-containing protein; KEGG: spe:Spro_1500 transcriptional regulator, CadC YP_004211150.1 PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: dze:Dd1591_1452 peptidase U61 LD-carboxypeptidase A YP_004211151.1 PFAM: major facilitator superfamily MFS_1; KEGG: bmj:BMULJ_06130 sugar transporter YP_004211152.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bmj:BMULJ_06131 mandelate racemase (MR)-like subfamily protein of the enolase superfamily YP_004211153.1 KEGG: yen:YE0346 transcriptional regulator YP_004211154.1 KEGG: spe:Spro_0403 thiol:disulfide interchange protein precursor; PFAM: cytochrome c biogenesis protein transmembrane region; Thioredoxin domain-containing protein YP_004211155.1 KEGG: spe:Spro_0405 anaerobic C4-dicarboxylate transporter; TIGRFAM: anaerobic c4-dicarboxylate antiporter, Dcu family; PFAM: anaerobic c4-dicarboxylate membrane transporter YP_004211156.1 KEGG: spe:Spro_0406 aspartate ammonia-lyase; TIGRFAM: aspartate ammonia-lyase; PFAM: fumarate lyase; Fumarase C-like YP_004211157.1 PFAM: FxsA cytoplasmic membrane protein; KEGG: spe:Spro_0407 FxsA cytoplasmic membrane protein YP_004211158.1 PFAM: Chaperonin Cpn10; KEGG: dze:Dd1591_3530 co-chaperonin GroES YP_004211159.1 KEGG: ypb:YPTS_0431 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1 YP_004211160.1 manually curated; KEGG: spe:Spro_0410 hypothetical protein YP_004211161.1 TIGRFAM: lysine 2,3-aminomutase YodO family protein; KEGG: ypi:YpsIP31758_3673 KamA family iron-sulfur cluster-binding protein; PFAM: Radical SAM domain protein YP_004211162.1 KEGG: spe:Spro_0412 elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor KOW-like domain-containing protein; Elongation factor P/YeiP protein YP_004211163.1 PFAM: Entericidin EcnAB; KEGG: spe:Spro_0413 entericidin EcnAB YP_004211164.1 PFAM: Entericidin EcnAB; KEGG: ebi:EbC_04350 entericidin B YP_004211165.1 PFAM: Lipocalin family protein; KEGG: yen:YE0360 outer membrane lipoprotein Blc YP_004211166.1 PFAM: fumarate reductase D subunit; KEGG: sbo:SBO_4305 fumarate reductase subunit D YP_004211167.1 PFAM: fumarate reductase subunit C; KEGG: esa:ESA_00163 fumarate reductase subunit C YP_004211168.1 KEGG: ddd:Dda3937_02146 fumarate reductase (anaerobic), Fe-S subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_004211169.1 KEGG: spe:Spro_0419 fumarate reductase flavoprotein subunit; TIGRFAM: fumarate reductase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_004211170.1 KEGG: spe:Spro_0420 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase-related protein GenX; PFAM: tRNA synthetase class II (D K and N) YP_004211171.1 KEGG: ebi:EbC_00110 purine permease; TIGRFAM: xanthine permease; uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease YP_004211172.1 KEGG: ebi:EbC_00100 amidohydrolase; PFAM: amidohydrolase YP_004211173.1 PFAM: MscS Mechanosensitive ion channel; KEGG: yps:YPTB0415 hypothetical protein YP_004211174.1 KEGG: spe:Spro_0422 phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related YP_004211175.1 KEGG: spe:Spro_0423 ribosome-associated GTPase; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC YP_004211176.1 KEGG: yen:YE0369 oligoribonuclease; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_004211177.1 manually curated; TIGRFAM: iron-sulfur cluster binding protein; KEGG: spe:Spro_0425 iron-sulfur cluster binding protein; PFAM: domain of unknown function DUF1730 YP_004211178.1 KEGG: stm:STM4356 ATP binding site; other site; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain-containing protein YP_004211179.1 PFAM: Uncharacterised protein family UPF0079, ATPase; KEGG: spe:Spro_0427 ATPase YP_004211180.1 KEGG: ypz:YPZ3_0369 N-acetylmuramoyl-L-alanine amidase-family protein; PFAM: cell wall hydrolase/autolysin; Peptidoglycan-binding lysin domain; SMART: cell wall hydrolase/autolysin; Peptidoglycan-binding LysM YP_004211181.1 KEGG: spe:Spro_0429 DNA mismatch repair protein; TIGRFAM: DNA mismatch repair protein MutL; PFAM: DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; MutL dimerisation YP_004211182.1 TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: spe:Spro_0430 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase YP_004211183.1 KEGG: yen:YE0377 RNA-binding protein Hfq; TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core YP_004211184.1 KEGG: spe:Spro_0432 GTPase HflX; TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related YP_004211185.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: spe:Spro_0433 FtsH protease regulator HflK; SMART: band 7 protein YP_004211186.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: yen:YE0380 FtsH protease regulator HflC; SMART: band 7 protein YP_004211187.1 PFAM: Protein of unknown function DUF2065; KEGG: pwa:Pecwa_3915 protein of unknown function DUF2065 YP_004211188.1 SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: spe:Spro_0436 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase YP_004211189.1 KEGG: ypb:YPTS_0460 transcriptional repressor NsrR; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_004211190.1 TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: ribonuclease II; Ribonuclease B OB region domain; Ribonuclease R winged-helix domain protein; RNA binding S1 domain protein; KEGG: yen:YE0384 exoribonuclease R; SMART: Cold shock protein YP_004211191.1 KEGG: yen:YE0385 23S rRNA (guanosine-2'-O-)-methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding YP_004211192.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: spe:Spro_0440 isovaleryl CoA dehydrogenase YP_004211193.1 PFAM: protein of unknown function DUF1471; KEGG: spe:Spro_0443 biofilm stress and motility protein A YP_004211194.1 KEGG: pct:PC1_3437 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004211195.1 PFAM: phospholipase/Carboxylesterase; KEGG: ypi:YpsIP31758_3640 esterase YP_004211196.1 KEGG: eca:ECA3613 30S ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like YP_004211197.1 KEGG: dda:Dd703_0795 primosomal replication protein N; manually curated; PFAM: single-strand binding protein/Primosomal replication protein n YP_004211198.1 KEGG: spe:Spro_0448 30S ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18 YP_004211199.1 KEGG: spe:Spro_0449 50S ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9-like YP_004211200.1 PFAM: Opacity-associated protein A domain protein; KEGG: spe:Spro_0451 opacity-associated protein A YP_004211201.1 PFAM: peptidylprolyl isomerase FKBP-type; FKBP-type peptidyl-prolyl isomerase domain protein; KEGG: pct:PC1_3428 peptidyl-prolyl cis-trans isomerase YP_004211202.1 KEGG: ypy:YPK_3777 iron-sulfur cluster repair di-iron protein; TIGRFAM: iron-sulfur cluster repair di-iron protein; PFAM: protein of unknown function DUF542 ScdA domain protein; Hemerythrin HHE cation binding domain protein YP_004211203.1 KEGG: spe:Spro_0453 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; TIGRFAM: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; PFAM: 5'-Nucleotidase domain-containing protein; metallophosphoesterase YP_004211204.1 KEGG: dze:Dd1591_0784 adenosine-3'(2'),5'-bisphosphate nucleotidase; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase YP_004211205.1 PFAM: Conserved hypothetical protein, YtfJ; KEGG: spe:Spro_0455 hypothetical protein YP_004211206.1 PFAM: protein of unknown function DUF1107; KEGG: spe:Spro_0456 hypothetical protein YP_004211207.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: yen:YE0403 hypothetical protein YP_004211208.1 TIGRFAM: peptide methionine sulfoxide reductase; KEGG: spe:Spro_0458 methionine sulfoxide reductase A; PFAM: methionine sulfoxide reductase A YP_004211209.1 PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; KEGG: spe:Spro_0459 surface antigen (D15) YP_004211210.1 PFAM: protein of unknown function DUF490; KEGG: spe:Spro_0460 hypothetical protein YP_004211211.1 PFAM: AIG2 family protein; KEGG: etr:ETAE_0379 hypothetical protein YP_004211212.1 KEGG: etr:ETAE_0380 inorganic pyrophosphatase; PFAM: inorganic pyrophosphatase YP_004211214.1 KEGG: spe:Spro_0463 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004211215.1 KEGG: pay:PAU_04051 fructose-1,6-bisphosphatase (d-fructose-1,6-bisphosphate 1 phosphohydrolase) (fbpase); PFAM: Inositol phosphatase/fructose-16-bisphosphatase YP_004211216.1 KEGG: spe:Spro_0465 UDP-N-acetylmuramate; TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein YP_004211217.1 PFAM: protein of unknown function DUF1471; KEGG: pam:PANA_3550 YhcN YP_004211219.1 PFAM: protein of unknown function DUF1471; KEGG: yen:YE0412 hypothetical protein YP_004211220.1 KEGG: ypb:YPTS_0489 arginine repressor; TIGRFAM: arginine repressor; PFAM: Arginine repressor-like YP_004211221.1 KEGG: ypb:YPTS_0490 malate dehydrogenase; TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: Lactate/malate dehydrogenase YP_004211222.1 KEGG: ddc:Dd586_0582 transcriptional regulator, Nlp YP_004211223.1 PFAM: MuA-transposase/repressor protein CI DNA-binding; KEGG: ypb:YPTS_0492 MuA-transposase/repressor protein CI DNA-binding YP_004211224.1 KEGG: pwa:Pecwa_0792 octaprenyl diphosphate synthase; manually curated; PFAM: Polyprenyl synthetase YP_004211225.1 KEGG: yen:YE0418 50S ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21 YP_004211226.1 KEGG: ypb:YPTS_0495 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27 YP_004211227.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ypb:YPTS_0496 hypothetical protein YP_004211228.1 KEGG: spe:Spro_0476 GTPase ObgE; TIGRFAM: GTP-binding protein Obg/CgtA; small GTP-binding protein; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related YP_004211229.1 PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein YP_004211230.1 KEGG: spe:Spro_0477 sensor protein BasS/PmrB; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004211231.1 KEGG: spe:Spro_0478 DNA-binding transcriptional regulator BasR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004211232.1 TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; KEGG: spe:Spro_0479 D-alanyl-D-alanine carboxypeptidase/endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C YP_004211233.1 KEGG: pct:PC1_0563 transcription elongation factor GreA; TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain-containing protein YP_004211234.1 PFAM: protein of unknown function UPF0044; KEGG: spe:Spro_0481 hypothetical protein YP_004211235.1 KEGG: yen:YE0427 23S rRNA methyltransferase J; TIGRFAM: ribosomal RNA large subunit methyltransferase J; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ YP_004211236.1 SMART: AAA ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: spe:Spro_0483 ATP-dependent metalloprotease; PFAM: peptidase M41; AAA ATPase YP_004211237.1 TIGRFAM: dihydropteroate synthase; KEGG: yen:YE0429 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_004211238.1 KEGG: pwa:Pecwa_0803 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase YP_004211239.1 KEGG: yen:YE0431 preprotein translocase subunit SecG; TIGRFAM: preprotein translocase SecG subunit; PFAM: Preprotein translocase SecG subunit YP_004211240.1 KEGG: spe:Spro_0488 transcription elongation factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: NusA domain-containing protein; RNA binding S1 domain protein YP_004211241.1 KEGG: ypb:YPTS_0510 translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; Initiation factor 2 associated domain protein ; translation initiation factor IF-2 domain-containing protein; elongation factor Tu domain 2 protein YP_004211242.1 KEGG: spe:Spro_0490 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A YP_004211243.1 KEGG: spe:Spro_0491 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B YP_004211244.1 KEGG: cko:CKO_04564 30S ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15 YP_004211245.1 SMART: KH domain protein; TIGRFAM: polyribonucleotide nucleotidyltransferase; KEGG: spe:Spro_0493 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding; K Homology, type 1, subgroup; RNA binding S1 domain protein YP_004211246.1 KEGG: spe:Spro_0494 lipoprotein NlpI; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat YP_004211247.1 KEGG: spe:Spro_0495 ATP-dependent RNA helicase DeaD; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004211248.1 KEGG: spe:Spro_0498 hypothetical protein; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: luciferase YP_004211249.1 PFAM: secretion protein HlyD family protein; KEGG: spe:Spro_0499 secretion protein HlyD family protein YP_004211250.1 PFAM: ABC transporter; KEGG: spe:Spro_0500 ABC transporter YP_004211251.1 PFAM: ABC transporter; KEGG: spe:Spro_0501 ABC transporter YP_004211252.1 PFAM: peptidase U32; KEGG: yen:YE0449 hypothetical protein YP_004211253.1 PFAM: peptidase U32; KEGG: cko:CKO_04553 hypothetical protein YP_004211254.1 PFAM: Sterol-binding domain protein; KEGG: spe:Spro_0505 sterol-binding domain-containing protein YP_004211255.1 PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE0452 acetyltransferase YP_004211256.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: yen:YE0453 GIY-YIG nuclease superfamily protein YP_004211257.1 KEGG: spe:Spro_0510 hypothetical protein YP_004211258.1 PFAM: Semialdehyde dehydrogenase NAD - binding; KEGG: spe:Spro_0511 hypothetical protein YP_004211259.1 TIGRFAM: phosphonate metabolim protein, transferase hexapeptide repeat family; KEGG: spe:Spro_0513 acetyltransferase (virginiamycin, streptogramin A, chloramphenicol) YP_004211260.1 KEGG: ebi:EbC_27490 ribose 1,5-bisphosphokinase; TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region YP_004211261.1 KEGG: spe:Spro_0515 phosphonate metabolism protein PhnM; TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase YP_004211262.1 TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; KEGG: spe:Spro_0516 phosphonate C-P lyase system protein PhnL; SMART: AAA ATPase YP_004211263.1 TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: spe:Spro_0517 phosphonate C-P lyase system protein PhnK; SMART: AAA ATPase YP_004211264.1 PFAM: phosphonate metabolism PhnJ; KEGG: pam:PANA_2395 PhnJ YP_004211265.1 PFAM: phosphonate metabolism; KEGG: spe:Spro_0519 phosphonate metabolism YP_004211266.1 KEGG: pct:PC1_0888 phosphonate C-P lyase system protein PhnH; TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism YP_004211267.1 KEGG: spe:Spro_0521 phosphonate metabolism PhnG; TIGRFAM: phosphonate C-P lyase system protein PhnG; PFAM: phosphonate metabolism PhnG YP_004211268.1 TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; KEGG: spe:Spro_0522 phosphonate metabolism transcriptional regulator PhnF; SMART: regulatory protein GntR HTH YP_004211269.1 PFAM: protein of unknown function DUF891; KEGG: eum:ECUMN_2400 hypothetical protein YP_004211270.1 KEGG: eba:ebA101 hypothetical protein YP_004211271.1 KEGG: yen:YE3481 gyrase inhibitor antitoxin YP_004211272.1 KEGG: pct:PC1_0359 anaerobic ribonucleotide reductase-activating protein; manually curated; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein YP_004211273.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; KEGG: spe:Spro_0525 anaerobic ribonucleoside triphosphate reductase; PFAM: formate C-acetyltransferase glycine radical; ATP-cone domain protein YP_004211274.1 TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase catalytic region; KEGG: spe:Spro_0528 trehalose-6-phosphate hydrolase; SMART: alpha amylase catalytic sub domain YP_004211275.1 TIGRFAM: PTS system, trehalose-specific IIBC subunit; PTS system, glucose-like IIB subunint; KEGG: spe:Spro_0529 PTS system trehalose(maltose)-specific transporter subunits IIBC; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_004211276.1 TIGRFAM: trehalose operon repressor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE3775 trehalose repressor; SMART: regulatory protein LacI YP_004211277.1 TIGRFAM: magnesium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; KEGG: spe:Spro_0535 magnesium-transporting ATPase MgtA; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase YP_004211278.1 PFAM: Integral membrane protein TerC; KEGG: eay:EAM_0499 protein Alx ( high pH-induced membrane-bound redox modulator) YP_004211279.1 PFAM: glutamine amidotransferase class-I; KEGG: spe:Spro_4317 glutamine amidotransferase class-I YP_004211280.1 PFAM: oxidoreductase domain protein; KEGG: spe:Spro_4316 oxidoreductase domain-containing protein YP_004211281.1 PFAM: protein of unknown function DUF45; KEGG: yen:YE3701 hypothetical protein YP_004211282.1 KEGG: spe:Spro_4312 rRNA (guanine-N(2)-)-methyltransferase; PFAM: methyltransferase small YP_004211283.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ypi:YpsIP31758_0501 2,4-dienoyl-coa reductase YP_004211284.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: spe:Spro_4743 enoyl-CoA hydratase YP_004211285.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; KEGG: yen:YE0053 RNase II stability modulator; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_004211286.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: spe:Spro_1371 glycoside hydrolase family 3 protein YP_004211287.1 KEGG: spe:Spro_2355 hypothetical protein YP_004211288.1 KEGG: ebi:EbC_44730 transcriptional regulator MalT; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_004211289.1 KEGG: ebi:EbC_44720 maltodextrin phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_004211290.1 TIGRFAM: 4-alpha-glucanotransferase; KEGG: ebi:EbC_44710 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77 YP_004211291.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ddd:Dda3937_00500 ISEch4 transposase YP_004211292.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_44700 maltose transport system permease protein YP_004211293.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_44690 maltose/maltodextrin ABC transporter permease protein YP_004211294.1 PFAM: extracellular solute-binding protein family 1; KEGG: ebi:EbC_44680 maltose/maltodextrin-binding periplasmic protein YP_004211295.1 KEGG: spe:Spro_4470 maltose/maltodextrin transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004211296.1 PFAM: porin LamB type; KEGG: ebi:EbC_44660 maltoporin YP_004211297.1 PFAM: Maltose operon periplasmic; KEGG: ebi:EbC_44650 maltose operon periplasmic protein YP_004211298.1 KEGG: pfs:PFLU2718 AraC-family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004211299.1 PFAM: Protein of unknown function DUF2000; KEGG: ebi:EbC_15810 conserved uncharacterized protein YP_004211300.1 KEGG: mlo:mll2704 acid phosphatase YP_004211301.1 KEGG: pfl:PFL_5108 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylguanine DNA methyltransferase ribonuclease domain protein YP_004211302.1 KEGG: set:SEN1744 glutamate dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region YP_004211303.1 KEGG: spe:Spro_3430 outer membrane receptor FepA; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor YP_004211304.1 PFAM: esterase; KEGG: spe:Spro_3429 enterobactin/ferric enterobactin esterase YP_004211305.1 KEGG: spe:Spro_3426 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004211306.1 PFAM: transport system permease protein; KEGG: spe:Spro_3425 iron-enterobactin transporter permease YP_004211307.1 PFAM: transport system permease protein; KEGG: spe:Spro_3424 iron-enterobactin transporter membrane protein YP_004211308.1 PFAM: periplasmic binding protein; KEGG: spe:Spro_3422 iron-enterobactin transporter periplasmic binding protein YP_004211309.1 PFAM: integrase family protein; KEGG: ent:Ent638_3514 phage integrase family protein YP_004211310.1 KEGG: aci:ACIAD0051 hypothetical protein YP_004211311.1 manually curated; KEGG: reu:Reut_A0552 hypothetical protein YP_004211312.1 KEGG: reu:Reut_A0551 hypothetical protein YP_004211313.1 KEGG: rso:RSc2281 hypothetical protein YP_004211314.1 KEGG: bcm:Bcenmc03_5369 hypothetical protein YP_004211315.1 KEGG: eta:ETA_14180 hypothetical protein YP_004211316.1 KEGG: nwi:Nwi_1613 hypothetical protein YP_004211317.1 KEGG: cch:Cag_0033 hypothetical protein YP_004211318.1 PFAM: integrase family protein; KEGG: ent:Ent638_3514 phage integrase family protein YP_004211319.1 PFAM: CI repressor; KEGG: kpn:KPN_04893 prophage repressor protein CI YP_004211320.1 KEGG: kpn:KPN_04892 prophage excisionase YP_004211321.1 KEGG: yps:YPTB1769 regulatory protein CII bacteriophage 186 YP_004211322.1 manually curated; KEGG: ypy:YPK_0886 hypothetical protein YP_004211323.1 KEGG: yps:YPTB1768 gpB bacteriophage P2 YP_004211324.1 KEGG: enc:ECL_04437 hypothetical protein YP_004211325.1 KEGG: pct:PC1_3161 hypothetical protein YP_004211326.1 TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; KEGG: stt:t3408 hypothetical protein YP_004211327.1 PFAM: replication gene A; KEGG: yps:YPTB1766 phage P2 replication protein YP_004211329.1 KEGG: plu:plu0863 hypothetical protein YP_004211330.1 KEGG: fjo:Fjoh_3614 hypothetical protein YP_004211331.1 KEGG: pha:PSHAb0220 stationary phase or STEss regulating sigma factor YP_004211332.1 KEGG: yps:YPTB1764 capsid portal protein; TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein YP_004211333.1 KEGG: ctu:Ctu_32400 terminase, ATPase subunit YP_004211334.1 PFAM: capsid scaffolding; KEGG: yps:YPTB1858 V protein phage 186 YP_004211335.1 KEGG: yps:YPTB1760 major capsid protein; TIGRFAM: phage major capsid protein, P2 family; PFAM: major capsid protein P2 YP_004211336.1 PFAM: small terminase subunit; KEGG: pct:PC1_3174 small terminase subunit YP_004211337.1 PFAM: head completion protein; KEGG: yps:YPTB1758 phage head completion protein GpL YP_004211338.1 PFAM: tail X family protein; KEGG: yps:YPTB1757 phage-related tail protein YP_004211339.1 KEGG: spe:Spro_0872 prophage Hp1 family holin YP_004211340.1 PFAM: glycoside hydrolase family 24; KEGG: yps:YPTB1755 phage lysozyme YP_004211341.1 TIGRFAM: phage lysis regulatory protein, LysB family; KEGG: yps:YPTB1754 Orf27; P2 LysB homolog; control of lysis [Ente YP_004211342.1 KEGG: ecv:APECO1_4476 tail protein YP_004211343.1 TIGRFAM: phage virion morphogenesis protein; KEGG: ctu:Ctu_32300 tail completion protein S YP_004211344.1 KEGG: bgf:BC1003_1616 hypothetical protein YP_004211345.1 TIGRFAM: phage baseplate assembly protein V; KEGG: spe:Spro_0869 phage baseplate assembly protein V YP_004211346.1 KEGG: mxa:MXAN_2295 hypothetical protein YP_004211347.1 PFAM: GPW/gp25 family protein; KEGG: yps:YPTB1750 hypothetical protein YP_004211348.1 PFAM: Baseplate J family protein; KEGG: spe:Spro_0867 baseplate J family protein YP_004211349.1 TIGRFAM: phage tail protein I; KEGG: ecz:ECS88_2197 tail protein I (GPI) YP_004211350.1 PFAM: tail fiber repeat 2 protein; KEGG: xbo:XBJ1_1381 e14 prophage; tail fiber protein (modular protein) YP_004211351.1 PFAM: tail assembly chaperone gp38; KEGG: plu:plu3023 hypothetical protein YP_004211352.1 KEGG: yps:YPTB1745 tail sheath protein (P2 and 186 bacteriophage) YP_004211353.1 KEGG: spe:Spro_0862 phage major tail tube protein; TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein YP_004211354.1 PFAM: tail E family protein; KEGG: spe:Spro_0861 tail E family protein YP_004211355.1 KEGG: kpn:KPN_04861 prophage tail protein; manually curated; PFAM: P2 GpE family protein YP_004211356.1 KEGG: kpn:KPN_04860 prophage tail length determinator; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region YP_004211357.1 PFAM: P2 GpU family protein; KEGG: pct:PC1_3197 P2 GpU family protein YP_004211358.1 KEGG: yps:YPTB1739 D protein bacteriophage 186 and P2 YP_004211359.1 KEGG: ddc:Dd586_2409 hypothetical protein YP_004211360.1 KEGG: ecg:E2348C_2893 predicted DNA-binding transcriptional regulator; manually curated; PFAM: transcriptional activator Ogr/delta YP_004211361.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: pwa:Pecwa_0782 G/U mismatch-specific DNA glycosylase YP_004211363.1 KEGG: dda:Dd703_2118 hypothetical protein YP_004211364.1 KEGG: pwa:Pecwa_4468 hypothetical protein YP_004211365.1 KEGG: cai:Caci_2650 hypothetical protein YP_004211366.1 KEGG: ypb:YPTS_3562 RNA polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 non-essential domain protein; sigma-70 1.1 domain protein; sigma-70 region 1.2; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein YP_004211367.1 TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; TOPRIM domain-containing protein; DNA primase, DnaB-helicase binding domain; DNA primase DnaG DnaB-binding; KEGG: spe:Spro_4299 DNA primase; SMART: DNA primase DnaG DnaB-binding; Toprim sub domain-containing protein YP_004211368.1 KEGG: pam:PANA_3388 RpsU; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21 YP_004211369.1 TIGRFAM: metalloendopeptidase, glycoprotease family; KEGG: sdy:SDY_3248 DNA-binding/iron metalloprotein/AP endonuclease; PFAM: peptidase M22 glycoprotease YP_004211370.1 PFAM: protein of unknown function DUF205; KEGG: ypb:YPTS_3558 glycerol-3-phosphate acyltransferase PlsY YP_004211371.1 TIGRFAM: dihydroneopterin aldolase; KEGG: yen:YE3679 bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase; PFAM: dihydroneopterin aldolase YP_004211372.1 KEGG: ent:Ent638_3460 undecaprenyl pyrophosphate phosphatase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA YP_004211373.1 PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: yen:YE3677 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase YP_004211374.1 SMART: SH3 domain protein; KEGG: spe:Spro_4292 signal transduction protein YP_004211375.1 PFAM: adenylate cyclase; KEGG: spe:Spro_4291 adenylate cyclase YP_004211376.1 KEGG: yen:YE3674 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase; PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase YP_004211377.1 KEGG: spe:Spro_4289 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: PfkB domain protein; cytidylyltransferase YP_004211378.1 PFAM: amino acid permease-associated region; KEGG: ypm:YP_2970 inner membrane protein YjeH YP_004211379.1 PFAM: protein of unknown function DUF526; KEGG: spe:Spro_4287 hypothetical protein YP_004211380.1 KEGG: dze:Dd1591_3263 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase YP_004211381.1 KEGG: tde:TDE0900 ABC transporter ATP-binding protein YP_004211382.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: ddd:Dda3937_00723 dioxygenase YP_004211383.1 KEGG: spe:Spro_4275 glutathionylspermidine synthase; PFAM: glutathionylspermidine synthase YP_004211384.1 PFAM: protein of unknown function DUF1190; KEGG: spe:Spro_4274 hypothetical protein YP_004211385.1 KEGG: ecq:ECED1_3701 outer membrane channel protein; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein YP_004211386.1 KEGG: ypb:YPTS_3540 ADP-ribose pyrophosphatase NudF; PFAM: NUDIX hydrolase YP_004211387.1 PFAM: protein of unknown function DUF1249; KEGG: enc:ECL_04361 hypothetical protein YP_004211388.1 PFAM: Calcineurin phosphoesterase domain protein; metallophosphoesterase; KEGG: ypb:YPTS_3538 cyclic 3',5'-adenosine monophosphate phosphodiesterase YP_004211389.1 PFAM: protein of unknown function UPF0227; KEGG: ddc:Dd586_0327 protein of unknown function UPF0227 YP_004211390.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA topoisomerase IV, B subunit; KEGG: spe:Spro_4263 DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; DNA gyrase subunit B domain protein YP_004211391.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: sgl:SG0274 hypothetical protein YP_004211392.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: ddd:Dda3937_01253 modulator of drug activity B YP_004211393.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA topoisomerase IV, A subunit; KEGG: spe:Spro_4259 DNA topoisomerase IV subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_004211394.1 SMART: phospholipid/glycerol acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; KEGG: enc:ECL_04340 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase YP_004211395.1 PFAM: multicopper oxidase type 3; Twin-arginine translocation pathway, signal sequence, subgroup; multicopper oxidase type 2; KEGG: yen:YE3654 repressor protein for FtsI YP_004211396.1 KEGG: ypb:YPTS_3528 2,5-diketo-D-gluconate reductase A; PFAM: aldo/keto reductase YP_004211397.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: pfo:Pfl01_2347 zinc-containing alcohol dehydrogenase superfamily protein YP_004211398.1 KEGG: spe:Spro_4214 AraC family transcriptional regulator; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004211399.1 PFAM: SNARE associated Golgi protein; KEGG: pct:PC1_0340 SNARE associated Golgi protein YP_004211400.1 KEGG: pwa:Pecwa_0384 cystathionine beta-lyase; TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_004211401.1 KEGG: eca:ECA0355 DedA family membrane protein; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit YP_004211402.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: cko:CKO_03566 hypothetical protein YP_004211403.1 KEGG: pct:PC1_0344 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7 YP_004211404.1 KEGG: pct:PC1_0345 TonB-system energizer ExbB; TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel YP_004211405.1 KEGG: spe:Spro_4210 TonB system transport protein ExbD type-1; TIGRFAM: TonB system transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR YP_004211406.1 TIGRFAM: galactarate dehydratase; KEGG: pwa:Pecwa_3558 galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein YP_004211407.1 KEGG: ebd:ECBD_0615 D-galactonate transporter; TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1 YP_004211408.1 TIGRFAM: 2-dehydro-3-deoxyglucarate aldolase; KEGG: dda:Dd703_0844 alpha-dehydro-beta-deoxy-D-glucarate aldolase; PFAM: HpcH/HpaI aldolase YP_004211409.1 TIGRFAM: 2-hydroxy-3-oxopropionate reductase; KEGG: pwa:Pecwa_3553 tartronate semialdehyde reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_004211410.1 TIGRFAM: glycerate kinase; KEGG: pwa:Pecwa_3551 glycerate kinase; PFAM: glycerate kinase YP_004211411.1 PFAM: alanine racemase domain protein; KEGG: bpt:Bpet1585 D-serine deaminase YP_004211412.1 KEGG: spe:Spro_0790 hybrid sensory histidine kinase BarA; PFAM: Protein of unknown function DUF2222; histidine kinase HAMP region domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; response regulator receiver; Hpt domain protein YP_004211413.1 KEGG: yen:YE0743 23S rRNA 5-methyluridine methyltransferase; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase YP_004211414.1 TIGRFAM: RelA/SpoT family protein; KEGG: spe:Spro_0792 GDP/GTP pyrophosphokinase; PFAM: RelA/SpoT domain protein; TGS domain-containing protein; amino acid-binding ACT domain protein YP_004211415.1 KEGG: spe:Spro_0793 nucleoside triphosphate pyrophosphohydrolase; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase YP_004211416.1 TIGRFAM: CTP synthase; KEGG: spe:Spro_0794 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I YP_004211417.1 TIGRFAM: enolase; KEGG: pwa:Pecwa_3545 phosphopyruvate hydratase; PFAM: Enolase-like YP_004211418.1 PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein YP_004211419.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: ent:Ent638_3232 transcriptional regulator YP_004211420.1 KEGG: ent:Ent638_3231 PTS system, glucose-like IIB subunint; TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_004211421.1 KEGG: ctu:Ctu_33340 N-acetylmannosamine-6-phosphate 2-epimerase; PFAM: N-acetylmannosamine-6-phosphate epimerase YP_004211422.1 PFAM: Radical SAM domain protein; KEGG: spe:Spro_0808 radical SAM domain-containing protein YP_004211423.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: kpu:KP1_4390 6-pyruvoyl tetrahydrobiopterin synthase YP_004211424.1 KEGG: dda:Dd703_0980 hypothetical protein YP_004211425.1 KEGG: ebi:EbC_35390 sulfite reductase [NADPH] flavoprotein alpha-component; TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha chain; PFAM: FAD-binding domain protein; flavodoxin/nitric oxide synthase; oxidoreductase FAD/NAD(P)-binding domain protein YP_004211426.1 KEGG: spe:Spro_0811 sulfite reductase subunit beta; TIGRFAM: sulfite reductase (NADPH) hemoprotein, beta-component; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein YP_004211427.1 KEGG: spe:Spro_0812 phosphoadenosine phosphosulfate reductase; TIGRFAM: phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase YP_004211428.1 PFAM: peptidase M28; KEGG: spe:Spro_0815 alkaline phosphatase isozyme conversion aminopeptidase YP_004211429.1 KEGG: spe:Spro_0817 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Sirohaem synthase, dimerisation domain YP_004211430.1 KEGG: kva:Kvar_0951 sulfate adenylyltransferase, small subunit; TIGRFAM: sulfate adenylyltransferase, small subunit; PFAM: phosphoadenosine phosphosulfate reductase YP_004211431.1 TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein; KEGG: yen:YE0763 sulfate adenylyltransferase subunit 1; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_004211432.1 TIGRFAM: adenylylsulfate kinase; KEGG: ypb:YPTS_0801 adenylylsulfate kinase; PFAM: adenylylsulfate kinase YP_004211433.1 KEGG: spe:Spro_0821 hypothetical protein YP_004211434.1 PFAM: Septum formation initiator; KEGG: spe:Spro_0825 cell division protein FtsB YP_004211435.1 manually curated; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; KEGG: yps:YPTB0770 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_004211436.1 KEGG: spe:Spro_0827 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase YP_004211437.1 PFAM: tRNA pseudouridine synthase D TruD; KEGG: spe:Spro_0828 tRNA pseudouridine synthase D YP_004211438.1 KEGG: spe:Spro_0829 stationary phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE YP_004211439.1 TIGRFAM: protein-L-isoaspartate O-methyltransferase; KEGG: spe:Spro_0830 protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_004211440.1 KEGG: spe:Spro_0831 lipoprotein NlpD; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_004211441.1 KEGG: spe:Spro_0832 RNA polymerase sigma factor RpoS; TIGRFAM: RNA polymerase sigma factor RpoS; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein YP_004211442.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; KEGG: yen:YE0776 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein YP_004211443.1 KEGG: bxe:Bxe_A0802 hypothetical protein YP_004211444.1 TIGRFAM: lytic murein transglycosylase B; KEGG: ypz:YPZ3_2604 membrane-bound lytic murein transglycosylase B YP_004211445.1 PFAM: CinA domain protein; KEGG: spe:Spro_0840 competence damage-inducible protein A YP_004211446.1 TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: yen:YE0829 recombinase A; SMART: AAA ATPase YP_004211447.1 PFAM: regulatory protein RecX; KEGG: ypy:YPK_3374 recombination regulator RecX YP_004211448.1 KEGG: spe:Spro_0843 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1 YP_004211449.1 KEGG: ebi:EbC_34800 carbon storage regulator; TIGRFAM: carbon storage regulator; PFAM: carbon storage regulator YP_004211450.1 KEGG: spe:Spro_0845 fructose-1-phosphatase; TIGRFAM: beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004211451.1 KEGG: ypb:YPTS_0864 hypothetical protein YP_004211452.1 KEGG: spe:Spro_0847 glutamate--cysteine ligase; TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase YP_004211453.1 KEGG: spe:Spro_0848 S-ribosylhomocysteinase; PFAM: LuxS protein YP_004211454.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: spe:Spro_0849 hypothetical protein YP_004211455.1 PFAM: cytochrome c assembly protein; KEGG: spe:Spro_0850 cytochrome c assembly protein YP_004211456.1 TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; KEGG: spe:Spro_0851 signal recognition particle protein; SMART: AAA ATPase YP_004211457.1 manually curated; TIGRFAM: ribosomal protein S16; KEGG: pam:PANA_3023 RpsP; PFAM: ribosomal protein S16 YP_004211458.1 KEGG: yen:YE0844 16S rRNA-processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein YP_004211459.1 TIGRFAM: tRNA (guanine-N1)-methyltransferase; KEGG: spe:Spro_0854 tRNA (guanine-N(1)-)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase YP_004211460.1 KEGG: yen:YE0846 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19 YP_004211461.1 PFAM: transcriptional activator Ogr/delta; KEGG: spe:Spro_0856 transcriptional activator Ogr/delta YP_004211462.1 KEGG: kpn:KPN_04858 prophage tail protein YP_004211463.1 PFAM: P2 GpU family protein; KEGG: pct:PC1_3197 P2 GpU family protein YP_004211464.1 KEGG: yps:YPTB1741 bacteriophage P2 tail protein gpT YP_004211465.1 KEGG: spe:Spro_0860 P2 GpE family protein; manually curated; PFAM: P2 GpE family protein YP_004211466.1 PFAM: tail E family protein; KEGG: spe:Spro_0861 tail E family protein YP_004211467.1 KEGG: spe:Spro_0862 phage major tail tube protein; TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein YP_004211468.1 KEGG: spe:Spro_0863 tail sheath protein YP_004211469.1 PFAM: Tail Collar domain protein; KEGG: ent:Ent638_3484 phage tail collar domain-containing protein YP_004211470.1 TIGRFAM: phage tail protein I; KEGG: yps:YPTB1748 bacteriophage protein YP_004211471.1 PFAM: Baseplate J family protein; KEGG: xne:XNC1_1190 baseplate assembly protein J (GpJ) YP_004211472.1 PFAM: GPW/gp25 family protein; KEGG: spe:Spro_0868 gpW/GP25 family protein YP_004211473.1 TIGRFAM: phage baseplate assembly protein V; KEGG: dze:Dd1591_1827 phage baseplate assembly protein V YP_004211474.1 KEGG: pam:PANA_3412 R YP_004211475.1 TIGRFAM: phage lysis regulatory protein, LysB family; KEGG: yps:YPTB1754 Orf27; P2 LysB homolog; control of lysis [Ente YP_004211476.1 PFAM: glycoside hydrolase family 24; KEGG: spe:Spro_0871 glycoside hydrolase family protein YP_004211477.1 KEGG: spe:Spro_0872 prophage Hp1 family holin YP_004211478.1 PFAM: tail X family protein; KEGG: spe:Spro_0873 tail X family protein YP_004211479.1 KEGG: ddd:Dda3937_03773 hypothetical protein YP_004211480.1 PFAM: replication gene A; KEGG: pct:PC1_3164 replication protein A YP_004211481.1 TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; KEGG: ddd:Dda3937_03774 hypothetical protein YP_004211482.1 KEGG: spe:Spro_0876 gpB bacteriophage P2-like protein YP_004211483.1 PFAM: CI repressor; KEGG: spe:Spro_0877 CI repressor YP_004211484.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: spe:Spro_0879 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_004211485.1 TIGRFAM: chorismate mutase; KEGG: yen:YE0851 bifunctional chorismate mutase/prephenate dehydrogenase; PFAM: Chorismate mutase, type II; Prephenate dehydrogenase YP_004211486.1 KEGG: yen:YE0852 bifunctional chorismate mutase/prephenate dehydratase; TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase, type II YP_004211487.1 KEGG: eca:ECA3349 sigma(54) modulation protein; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA YP_004211488.1 TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: spe:Spro_0883 outer membrane protein assembly complex subunit YfiO YP_004211489.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: spe:Spro_0884 23S rRNA pseudouridine synthase D; SMART: RNA-binding S4 domain protein YP_004211490.1 PFAM: protein of unknown function DUF152; KEGG: pct:PC1_3142 hypothetical protein YP_004211491.1 TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase; Clp ATPase-like; KEGG: spe:Spro_0886 protein disaggregation chaperone; SMART: AAA ATPase YP_004211492.1 TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); KEGG: spe:Spro_3751 alpha-ketoglutarate transporter YP_004211493.1 KEGG: spe:Spro_3749 phosphatidylserine synthase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase YP_004211494.1 PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: spe:Spro_3748 GCN5-related N-acetyltransferase YP_004211495.1 PFAM: DTW domain containing protein; KEGG: ypb:YPTS_0894 DTW domain-containing protein YP_004211496.1 KEGG: pam:PANA_3003 TrxC; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein YP_004211497.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: spe:Spro_3745 methyltransferase YP_004211498.1 KEGG: ypb:YPTS_0897 EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004211499.1 KEGG: spe:Spro_3743 efflux pump membrane protein; TIGRFAM: efflux pump membrane protein; PFAM: secretion protein HlyD family protein YP_004211500.1 KEGG: spe:Spro_3742 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004211501.1 KEGG: spe:Spro_3741 transcriptional repressor MprA; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004211502.1 PFAM: branched-chain amino acid transport; KEGG: yen:YE3239 hypothetical protein YP_004211503.1 PFAM: AzlC family protein; KEGG: ypb:YPTS_0901 AzlC family protein YP_004211504.1 PFAM: major facilitator superfamily MFS_1; KEGG: ypz:YPZ3_2867 probable sugar transporter YP_004211505.1 KEGG: plu:plu3021 hypothetical protein YP_004211506.1 PFAM: YcfA family protein; KEGG: ecf:ECH74115_A0043 hypothetical protein YP_004211507.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: ecg:E2348C_2944 glycine betaine transporter periplasmic subunit YP_004211508.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: ebi:EbC_22190 osmoprotectant transport protein OusBX YP_004211509.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3734 glycine betaine transporter membrane protein YP_004211510.1 TIGRFAM: glycine betaine/L-proline ABC transporter ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; KEGG: yen:YE0925 glycine betaine/L-proline transport ATP-binding protein; SMART: AAA ATPase YP_004211511.1 KEGG: spe:Spro_3732 response regulator receiver/unknown domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004211512.1 KEGG: spe:Spro_3731 signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein YP_004211513.1 PFAM: Citrate carrier protein; KEGG: spe:Spro_3730 citrate carrier protein YP_004211514.1 PFAM: NLP/P60 protein; KEGG: ctu:Ctu_40060 lipoprotein spr YP_004211515.1 PFAM: aldo/keto reductase; KEGG: ent:Ent638_3410 aldo-keto reductase YP_004211516.1 KEGG: pct:PC1_3134 ribonucleotide-diphosphate reductase subunit beta; PFAM: ribonucleotide reductase YP_004211517.1 KEGG: ypb:YPTS_3074 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, subunit alpha; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase domain protein; Ribonucleotide reductase large subunit domain protein YP_004211518.1 KEGG: pwa:Pecwa_1147 ribonucleotide reductase stimulatory protein; TIGRFAM: NrdI protein; PFAM: NrdI family protein YP_004211519.1 KEGG: yen:YE0929 glutaredoxin; TIGRFAM: glutaredoxin-like protein NrdH; PFAM: glutaredoxin YP_004211520.1 KEGG: spe:Spro_3720 alkylhydroperoxidase; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase YP_004211521.1 KEGG: yen:YE0931 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_004211522.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: spe:Spro_3718 hypothetical protein YP_004211523.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3711 major facilitator transporter YP_004211524.1 PFAM: Protein of unknown function DUF2002; KEGG: spe:Spro_3710 hypothetical protein YP_004211525.1 KEGG: gur:Gura_1217 transcription activator, effector binding; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004211526.1 PFAM: protein of unknown function DUF1198; KEGG: yen:YE0938 hypothetical protein YP_004211527.1 KEGG: ecq:ECED1_1926 6-phosphofructokinase 2; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein YP_004211528.1 PFAM: adenylate cyclase; KEGG: reu:Reut_A0631 adenylate cyclase YP_004211529.1 KEGG: spe:Spro_3899 global regulator; TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase) YP_004211530.1 PFAM: protein of unknown function DUF339; KEGG: enc:ECL_04223 hypothetical protein YP_004211531.1 KEGG: spe:Spro_3897 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1434 YP_004211532.1 KEGG: spe:Spro_3893 flavodoxin FldB; TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase YP_004211533.1 KEGG: ypb:YPTS_3298 site-specific tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein YP_004211534.1 PFAM: Disulphide bond isomerase, DsbC/G-like; KEGG: spe:Spro_3891 thiol:disulfide interchange protein DsbC YP_004211535.1 KEGG: spe:Spro_3890 ssDNA exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1 YP_004211536.1 manually curated; KEGG: ddd:Dda3937_02293 peptide chain release factor 2 YP_004211537.1 TIGRFAM: lysyl-tRNA synthetase; KEGG: yen:YE3374 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type YP_004211538.1 KEGG: spe:Spro_0470 transcriptional regulator, Nlp YP_004211539.1 TIGRFAM: argininosuccinate synthase; KEGG: ypb:YPTS_1693 argininosuccinate synthase; PFAM: argininosuccinate synthase YP_004211540.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pam:PANA_1889 CynR YP_004211541.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bmd:BMD_0329 peptidase M20 YP_004211542.1 PFAM: nucleoside recognition domain protein; KEGG: pam:PANA_1891 YjiH YP_004211543.1 PFAM: nucleoside recognition domain protein; KEGG: pam:PANA_1892 YjiG YP_004211544.1 KEGG: pam:PANA_1893 AmhX; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004211545.1 KEGG: yen:YE3361 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004211546.1 PFAM: Protein of unknown function DUF2000; KEGG: yen:YE3360 hypothetical protein YP_004211547.1 PFAM: major facilitator superfamily MFS_1; KEGG: ebi:EbC_20390 sugar efflux transporter YP_004211548.1 KEGG: bpy:Bphyt_6644 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_004211549.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: mms:mma_1576 D-alanyl-D-alanine carboxypeptidase YP_004211550.1 PFAM: peptidase C26; KEGG: mag:amb4127 glutamine amidotransferase YP_004211551.1 KEGG: ebi:EbC_35960 multidrug resistance protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004211552.1 PFAM: acriflavin resistance protein; KEGG: ebi:EbC_35950 multidrug resistance protein YP_004211553.1 PFAM: acriflavin resistance protein; KEGG: ebi:EbC_35940 multidrug resistance protein YP_004211554.1 KEGG: ebi:EbC_35930 RND efflux system, outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004211555.1 KEGG: vsa:VSAL_I0282 hypothetical protein YP_004211556.1 KEGG: xne:XNC1_2606 sugar fermentation stimulation protein B (Ner-like protein) YP_004211557.1 KEGG: ypi:YpsIP31758_0357 DNA-damage-inducible protein J; TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin YP_004211558.1 manually curated; TIGRFAM: addiction module toxin, RelE/StbE family; KEGG: hde:HDEF_1232 addiction module toxin; PFAM: plasmid stabilization system YP_004211559.1 KEGG: ebi:EbC_35970 RND efflux system, outer membrane protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004211560.1 KEGG: ebi:EbC_35980 acriflavine resistance protein B; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_004211561.1 KEGG: ebi:EbC_35990 acriflavine resistance protein A; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004211562.1 KEGG: ebi:EbC_23460 PTS system, maltose and glucose-specific IIbc component; TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_004211563.1 KEGG: eat:EAT1b_2257 phophonate C-P lyase system transcriptional regulator PhnF, GntR family; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004211564.1 KEGG: spe:Spro_3843 ABC transporter; PFAM: ABC transporter; ABC transporter related; SMART: AAA ATPase YP_004211565.1 KEGG: spe:Spro_3842 hypothetical protein YP_004211566.1 KEGG: spe:Spro_3840 beta-lactamase domain-containing protein YP_004211567.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pwa:Pecwa_3627 transcriptional regulator, LysR family YP_004211568.1 PFAM: major facilitator superfamily MFS_1; KEGG: ypy:YPK_1022 major facilitator transporter YP_004211569.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3837 DNA-binding transcriptional regulator LysR YP_004211570.1 KEGG: spe:Spro_3836 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2 YP_004211571.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: dda:Dd703_0755 phosphotransferase system PTS lactose/cellobiose-specific IIA subunit YP_004211572.1 TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; KEGG: eca:ECA3647 PTS system, lichenan-specific IIC component; PFAM: phosphotransferase system EIIC YP_004211573.1 PFAM: glycoside hydrolase family 1; KEGG: dze:Dd1591_0737 glycoside hydrolase family 1 YP_004211574.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: ddc:Dd586_3406 phosphotransferase system lactose/cellobiose-specific IIB subunit YP_004211575.1 KEGG: ebi:EbC_36060 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004211576.1 PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_3833 GCN5-related N-acetyltransferase YP_004211577.1 KEGG: ypb:YPTS_3166 DNA-binding transcriptional regulator GalR; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004211578.1 KEGG: spe:Spro_3831 molybdopterin oxidoreductase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_004211579.1 KEGG: ypb:YPTS_3164 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_004211580.1 PFAM: major facilitator superfamily MFS_1; KEGG: ypb:YPTS_3163 lysophospholipid transporter LplT YP_004211581.1 PFAM: aldo/keto reductase; KEGG: pct:PC1_0899 aldo-keto reductase YP_004211582.1 PFAM: protein of unknown function DUF903; KEGG: spe:Spro_3827 hypothetical protein YP_004211583.1 KEGG: dda:Dd703_3019 DNA mismatch repair protein; TIGRFAM: DNA mismatch repair endonuclease mutH; PFAM: DNA mismatch repair protein MutH, conserved region YP_004211584.1 KEGG: spe:Spro_3824 dinucleoside polyphosphate hydrolase; manually curated; PFAM: NUDIX hydrolase YP_004211585.1 SMART: GAF domain protein; manually curated; KEGG: spe:Spro_3823 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; GAF domain protein; PEP-utilising protein mobile region YP_004211586.1 KEGG: spe:Spro_3822 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase YP_004211587.1 TIGRFAM: thymidylate synthase; KEGG: spe:Spro_3821 thymidylate synthase; PFAM: thymidylate synthase YP_004211588.1 KEGG: spe:Spro_3820 hypothetical protein YP_004211589.1 KEGG: pwa:Pecwa_3394 hypothetical protein YP_004211590.1 PFAM: Protein of unknown function DUF2509; KEGG: pwa:Pecwa_3393 protein of unknown function DUF2509 YP_004211591.1 KEGG: spe:Spro_3817 prepilin peptidase dependent protein c precursor YP_004211592.1 PFAM: peptidase M16 domain protein; KEGG: spe:Spro_3815 peptidase M16 domain-containing protein YP_004211593.1 KEGG: ypb:YPTS_3145 N-acetylglutamate synthase; TIGRFAM: amino-acid N-acetyltransferase; PFAM: aspartate/glutamate/uridylate kinase; GCN5-related N-acetyltransferase YP_004211594.1 KEGG: yen:YE3307 N-acetylmuramoyl-L-alanine amidase AmiC precursor; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin YP_004211595.1 PFAM: MltA domain protein; 3D domain-containing protein; KEGG: spe:Spro_3810 murein transglycosylase A YP_004211596.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: ypb:YPTS_3142 UBA/ThiF-type NAD/FAD binding protein YP_004211597.1 KEGG: yen:YE3304 hypothetical protein; TIGRFAM: cysteine desulfurase, sulfur acceptor subunit CsdE; PFAM: Fe-S metabolism associated SufE YP_004211598.1 PFAM: aminotransferase class V; KEGG: spe:Spro_3807 cysteine sulfinate desulfinase YP_004211599.1 PFAM: protein of unknown function DUF903; KEGG: yen:YE3302 lipoprotein YP_004211600.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3805 DNA-binding transcriptional activator GcvA YP_004211601.1 PFAM: protein of unknown function DUF423; KEGG: ebi:EbC_35660 hypothetical protein YP_004211602.1 KEGG: spe:Spro_3803 RNA 2'-O-ribose methyltransferase YP_004211603.1 KEGG: spe:Spro_3802 exonuclease IX; PFAM: 5'-3' exonuclease, SAM-fold domain; 5'-3' exonuclease, N-terminal resolvase-like domain; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2 YP_004211604.1 PFAM: Conserved hypothetical protein CHP00730; KEGG: spe:Spro_3801 hypothetical protein YP_004211605.1 TIGRFAM: 7-cyano-7-deazaguanine reductase; KEGG: yen:YE3295 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase YP_004211606.1 PFAM: Syd family protein; KEGG: ypb:YPTS_3132 SecY interacting protein Syd YP_004211607.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3798 major facilitator transporter YP_004211608.1 PFAM: protein of unknown function DUF446; KEGG: yen:YE3291 hypothetical protein YP_004211609.1 PFAM: pseudouridine synthase; KEGG: yen:YE3290 tRNA pseudouridine synthase C YP_004211610.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: spe:Spro_3795 flavodoxin YP_004211611.1 KEGG: spe:Spro_3794 hypothetical protein YP_004211612.1 TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; KEGG: seh:SeHA_C0250 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_004211613.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: protein-P-II uridylyltransferase; KEGG: spe:Spro_3792 PII uridylyl-transferase; PFAM: GlnD PII-uridylyltransferase; DNA polymerase beta domain protein region; metal-dependent phosphohydrolase HD sub domain; amino acid-binding ACT domain protein YP_004211614.1 TIGRFAM: methionine aminopeptidase, type I; KEGG: spe:Spro_3791 methionine aminopeptidase; PFAM: peptidase M24 YP_004211615.1 KEGG: ent:Ent638_0707 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2 YP_004211616.1 KEGG: spe:Spro_3789 elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein YP_004211617.1 KEGG: ypb:YPTS_3121 uridylate kinase; TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_004211618.1 KEGG: ebi:EbC_08130 ribosome recycling factor; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor YP_004211619.1 TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: spe:Spro_3786 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain-containing protein YP_004211620.1 TIGRFAM: undecaprenyl diphosphate synthase; KEGG: spe:Spro_3785 undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_004211621.1 PFAM: phosphatidate cytidylyltransferase; KEGG: spe:Spro_3784 CDP-diglyceride synthase YP_004211622.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: yen:YE3277 zinc metallopeptidase RseP; SMART: PDZ/DHR/GLGF domain protein YP_004211623.1 KEGG: pct:PC1_0949 outer membrane protein assembly factor YaeT; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein YP_004211624.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: spe:Spro_3781 periplasmic chaperone YP_004211625.1 KEGG: yen:YE3274 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein YP_004211626.1 KEGG: pct:PC1_0952 (3R)-hydroxymyristoyl-ACP dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_004211627.1 TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: pwa:Pecwa_3348 UDP-N-acetylglucosamine acyltransferase; PFAM: transferase hexapeptide repeat containing protein YP_004211628.1 TIGRFAM: lipid-A-disaccharide synthase; KEGG: spe:Spro_3777 lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19 YP_004211629.1 KEGG: dda:Dd703_2966 ribonuclease HII; PFAM: ribonuclease HII/HIII YP_004211630.1 SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, subunit alpha; KEGG: spe:Spro_3775 DNA polymerase III subunit alpha; PFAM: DNA polymerase III subunit alpha; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type YP_004211631.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, subunit alpha; KEGG: spe:Spro_3774 acetyl-CoA carboxylase carboxyltransferase subunit alpha; PFAM: Acetyl-CoA carboxylase, subunit alpha, conserved region YP_004211632.1 KEGG: spe:Spro_3773 lysine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein YP_004211633.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: spe:Spro_3770 glyoxalase/bleomycin resistance protein/dioxygenase YP_004211634.1 KEGG: spe:Spro_3765 tRNA(Ile)-lysidine synthetase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: Protein of unkown function DUF1946 PP-loop ATpase; PP-loop domain protein YP_004211635.1 PFAM: cytochrome c class I; KEGG: spe:Spro_3764 cytochrome c class I YP_004211636.1 PFAM: Modulator of Rho-dependent transcription termination; KEGG: yen:YE3263 Rho-binding antiterminator YP_004211637.1 PFAM: protein of unknown function UPF0253; KEGG: spe:Spro_3762 hypothetical protein YP_004211638.1 PFAM: YaeQ family protein; KEGG: spe:Spro_3761 YaeQ family protein YP_004211639.1 PFAM: Class I peptide chain release factor; KEGG: yen:YE3260 peptidyl-tRNA hydrolase domain protein YP_004211640.1 KEGG: spe:Spro_3759 lipoprotein involved with copper homeostasis and adhesion YP_004211641.1 KEGG: yen:YE3258 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon-binding domain protein YP_004211642.1 PFAM: Uncharacterised protein family UPF0066; KEGG: spe:Spro_3757 hypothetical protein YP_004211643.1 KEGG: yen:YE3256 outer membrane lipoprotein YP_004211644.1 KEGG: spe:Spro_3755 DL-methionine transporter substrate-binding subunit; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein YP_004211645.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3754 DL-methionine transporter permease subunit YP_004211646.1 TIGRFAM: D-methionine ABC transporter ATPase subunit; PFAM: ABC transporter related; NIL domain; KEGG: spe:Spro_3753 DL-methionine transporter ATP-binding subunit; SMART: AAA ATPase YP_004211647.1 KEGG: ecz:ECS88_0212 D,D-heptose 1,7-bisphosphate phosphatase; TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004211648.1 KEGG: yen:YE0896 hypothetical protein YP_004211649.1 manually curated; PFAM: phospholipid/glycerol acyltransferase; KEGG: spe:Spro_0889 phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_004211650.1 KEGG: spe:Spro_0890 acyl carrier protein YP_004211651.1 PFAM: phosphopantetheine-binding; KEGG: spe:Spro_0891 acyl carrier protein YP_004211652.1 KEGG: spe:Spro_0892 inner membrane protein YP_004211653.1 PFAM: AMP-dependent synthetase and ligase; KEGG: spe:Spro_0893 AMP-binding protein YP_004211654.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: spe:Spro_0894 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_004211655.1 PFAM: glycosyl transferase family 2; KEGG: spe:Spro_0895 glycosyl transferase family protein YP_004211656.1 PFAM: thioesterase superfamily protein; KEGG: enc:ECL_04848 thioesterase superfamily protein YP_004211657.1 KEGG: spe:Spro_0897 outer-membrane lipoprotein carrier protein YP_004211658.1 KEGG: spe:Spro_0898 inner membrane protein YP_004211659.1 KEGG: spe:Spro_0899 lipoprotein YP_004211660.1 PFAM: Beta-ketoacyl synthase; KEGG: spe:Spro_0900 3-oxoacyl-(acyl carrier protein) synthase I YP_004211661.1 KEGG: spe:Spro_0901 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_004211662.1 KEGG: spe:Spro_0902 3-ketoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_004211663.1 PFAM: Beta-ketoacyl synthase; KEGG: spe:Spro_0903 3-oxoacyl-(acyl carrier protein) synthase II YP_004211664.1 KEGG: ent:Ent638_3900 holo-(acyl carrier protein) synthase 2 YP_004211665.1 PFAM: aldo/keto reductase; KEGG: spe:Spro_0904 2,5-diketo-D-gluconate reductase B YP_004211666.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_0905 LysR family transcriptional regulator YP_004211667.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_0906 major facilitator transporter YP_004211668.1 KEGG: ctu:Ctu_08330 hypothetical protein; manually curated; PFAM: Endonuclease/exonuclease/phosphatase YP_004211669.1 KEGG: pct:PC1_3139 membrane-bound lytic murein transglycosylase D; PFAM: lytic transglycosylase catalytic; MLTD_N domain protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_004211670.1 TIGRFAM: hydroxyacylglutathione hydrolase; KEGG: spe:Spro_0909 hydroxyacylglutathione hydrolase YP_004211671.1 PFAM: methyltransferase type 11; KEGG: spe:Spro_0910 methyltransferase type 11 YP_004211672.1 KEGG: spe:Spro_0911 ribonuclease H; PFAM: ribonuclease H YP_004211673.1 KEGG: eca:ECA4274 carbon-nitrogen hydrolase; TIGRFAM: N-carbamoylputrescine amidase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004211674.1 TIGRFAM: agmatine deiminase; KEGG: pwa:Pecwa_0168 agmatine deiminase; PFAM: Porphyromonas-type peptidyl-arginine deiminase YP_004211675.1 SMART: Exonuclease; TIGRFAM: DNA polymerase III, subunit epsilon; KEGG: eca:ECA3339 DNA polymerase III subunit epsilon; PFAM: Exonuclease RNase T and DNA polymerase III YP_004211676.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: dda:Dd703_0898 permease for cytosine/purines uracil thiamine allantoin YP_004211677.1 KEGG: ddd:Dda3937_00905 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004211678.1 KEGG: spe:Spro_0915 Asp/Glu racemase; PFAM: Asp/Glu/hydantoin racemase YP_004211679.1 TIGRFAM: urate catabolism protein; KEGG: spe:Spro_0916 chitin deacetylase; PFAM: polysaccharide deacetylase YP_004211680.1 KEGG: spe:Spro_0927 hypothetical protein YP_004211681.1 KEGG: ypy:YPK_3332 amidase; TIGRFAM: amidohydrolase, AtzE family; PFAM: Amidase YP_004211682.1 KEGG: spe:Spro_0929 hypothetical protein YP_004211683.1 TIGRFAM: gamma-glutamyltransferase; KEGG: spe:Spro_0930 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_004211684.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: spe:Spro_0931 RpiR family transcriptional regulator YP_004211685.1 KEGG: pam:PANA_0860 FliY; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004211686.1 KEGG: pwa:Pecwa_3468 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004211687.1 KEGG: pct:PC1_3311 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004211688.1 KEGG: spe:Spro_0935 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004211689.1 PFAM: aminotransferase class V; KEGG: spe:Spro_0936 aminotransferase class V YP_004211690.1 TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: ypi:YpsIP31758_3185 allantoate amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004211691.1 KEGG: ddd:Dda3937_02651 uricase; TIGRFAM: OHCU decarboxylase; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase YP_004211692.1 KEGG: spe:Spro_0939 transthyretin; TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin YP_004211693.1 PFAM: glutamine amidotransferase class-I; KEGG: ara:Arad_7095 CTP synthase protein YP_004211694.1 PFAM: Domain of unknown function DUF1993; KEGG: rme:Rmet_1570 hypothetical protein YP_004211695.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: spe:Spro_0940 hypothetical protein YP_004211696.1 PFAM: aminotransferase class I and II; KEGG: yen:YE3234 aminotransferase YP_004211697.1 KEGG: yen:YE3233 methylthioribulose-1-phosphate dehydratase; TIGRFAM: methylthioribulose-1-phosphate dehydratase; PFAM: class II aldolase/adducin family protein YP_004211698.1 TIGRFAM: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; KEGG: spe:Spro_0943 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004211699.1 KEGG: spe:Spro_0944 acireductone dioxygenase ARD; PFAM: Acireductone dioxygenase ARD YP_004211700.1 TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; KEGG: dda:Dd703_0921 translation initiation factor, aIF-2BI family; PFAM: initiation factor 2B related YP_004211701.1 TIGRFAM: 5-methylthioribose kinase; KEGG: yen:YE3228 methylthioribose kinase; PFAM: aminoglycoside phosphotransferase YP_004211702.1 PFAM: protein of unknown function DUF1456; KEGG: pfl:PFL_1244 hypothetical protein YP_004211703.1 KEGG: sea:SeAg_B2933 glycoporin YP_004211704.1 PFAM: protein of unknown function DUF1974; acyl-CoA dehydrogenase domain-containing protein; KEGG: spe:Spro_0949 acyl-CoA dehydrogenase YP_004211705.1 KEGG: spe:Spro_0950 phosphoheptose isomerase; TIGRFAM: phosphoheptose isomerase; PFAM: sugar isomerase (SIS) YP_004211706.1 PFAM: glutamine amidotransferase class-II; KEGG: spe:Spro_0951 glutamine amidotransferase class-II YP_004211707.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: yen:YE3221 hypothetical protein YP_004211708.1 KEGG: spe:Spro_0962 DNA polymerase IV; PFAM: UMUC domain protein DNA-repair protein YP_004211709.1 TIGRFAM: aminoacyl-histidine dipeptidase; KEGG: yen:YE3206 aminoacyl-histidine dipeptidase; PFAM: peptidase dimerisation domain protein; peptidase M20 YP_004211710.1 KEGG: eta:ETA_25980 xanthine-guanine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004211711.1 KEGG: yen:YE3204 fermentation/respiration switch protein YP_004211712.1 PFAM: transcriptional regulator Crl; KEGG: yen:YE3203 DNA-binding transcriptional regulator Crl YP_004211713.1 TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; KEGG: ypb:YPTS_0946 gamma-glutamyl kinase; SMART: PUA domain containing protein YP_004211714.1 TIGRFAM: gamma-glutamyl phosphate reductase; KEGG: yen:YE3201 gamma-glutamyl phosphate reductase; PFAM: Aldehyde Dehydrogenase YP_004211715.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pol:Bpro_3431 LysR family transcriptional regulator YP_004211716.1 KEGG: rlt:Rleg2_1027 beta-lactamase domain protein YP_004211717.1 PFAM: alpha/beta hydrolase fold; KEGG: rlt:Rleg2_1028 alpha/beta hydrolase fold YP_004211718.1 PFAM: Colicin D; KEGG: ypy:YPK_2802 colicin D YP_004211719.1 PFAM: Colicin immunity protein/pyocin immunity protein; KEGG: eoi:ECO111_p4-05 colicin immunity protein YP_004211720.1 KEGG: ctu:Ctu_00330 hypothetical protein YP_004211721.1 KEGG: ypi:YpsIP31758_B0080 hypothetical protein YP_004211722.1 PFAM: Colicin E3 catalytic; S-type Pyocin domain protein; KEGG: enc:ECL_02217 hypothetical protein YP_004211723.1 KEGG: ddi:DDB_G0289121 cAMP-specific phosphodiesterase YP_004211724.1 KEGG: ypb:YPTS_3238 hypothetical protein YP_004211725.1 PFAM: NIPSNAP family containing protein; KEGG: eci:UTI89_C0287 hypothetical protein YP_004211726.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_24020 transcriptional regulator YP_004211727.1 PFAM: aldo/keto reductase; KEGG: ecz:ECS88_0298 aldo-keto reductase YP_004211728.1 PFAM: aldo/keto reductase; KEGG: efe:EFER_2672 aldo-keto reductase YP_004211729.1 KEGG: pam:PANA_1081 hypothetical protein YP_004211730.1 PFAM: protein of unknown function DUF1471; KEGG: spe:Spro_1393 hypothetical protein YP_004211731.1 KEGG: xac:XAC4351 hypothetical protein YP_004211732.1 KEGG: ent:Ent638_1660 hypothetical protein; manually curated; PFAM: protein of unknown function DUF333 YP_004211733.1 TIGRFAM: amidohydrolase; KEGG: ddc:Dd586_2912 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004211734.1 KEGG: dze:Dd1591_1334 acetyltransferase YP_004211735.1 KEGG: yen:YE1405 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004211736.1 PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: ebi:EbC_21600 xylose isomerase YP_004211737.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: tau:Tola_1943 periplasmic binding protein/LacI transcriptional regulator YP_004211738.1 KEGG: tau:Tola_1942 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004211739.1 PFAM: inner-membrane translocator; KEGG: pam:PANA_1875 RbsC YP_004211740.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: ebi:EbC_21640 HTH-type transcriptional regulator RpiR YP_004211741.1 PFAM: PfkB domain protein; KEGG: tau:Tola_1939 PfkB domain protein YP_004211742.1 TIGRFAM: conserved hypothetical protein; KEGG: kpu:KP1_4355 hypothetical protein YP_004211743.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: eay:EAM_2132 NADH:flavin oxidoreductase YP_004211744.1 KEGG: ddc:Dd586_2006 exodeoxyribonuclease V, subunit gamma; TIGRFAM: exodeoxyribonuclease V, subunit gamma YP_004211745.1 KEGG: ddd:Dda3937_02948 exonuclease V (RecBCD complex), subunit beta; TIGRFAM: exodeoxyribonuclease V, subunit beta; PFAM: UvrD/REP helicase YP_004211746.1 KEGG: ddc:Dd586_2008 exodeoxyribonuclease V, subunit alpha; TIGRFAM: exodeoxyribonuclease V, subunit alpha YP_004211747.1 KEGG: pam:PANA_0927 hypothetical protein YP_004211748.1 KEGG: sbc:SbBS512_E1966 hypothetical protein YP_004211749.1 KEGG: ypb:YPTS_3753 regulatory protein CsrD YP_004211750.1 PFAM: major facilitator superfamily MFS_1; KEGG: avn:Avin_17740 MFS transporter YP_004211751.1 PFAM: beta-lactamase; KEGG: bcm:Bcenmc03_4045 beta-lactamase YP_004211752.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pct:PC1_3565 transcriptional regulator, LysR family YP_004211753.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rhi:NGR_c05090 acetyltransferase YP_004211754.1 KEGG: dda:Dd703_3814 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004211755.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: eca:ECA3374 signaling membrane protein; SMART: GGDEF domain containing protein YP_004211756.1 KEGG: ebi:EbC_45200 conserved uncharacterized protein YiaF YP_004211757.1 PFAM: protein of unknown function DUF1615; KEGG: spe:Spro_0988 hypothetical protein YP_004211758.1 KEGG: spe:Spro_2061 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_004211761.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA0937 transport protein YP_004211762.1 KEGG: tau:Tola_2583 glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein YP_004211763.1 KEGG: fgr:FG02859.1 hypothetical protein YP_004211764.1 KEGG: ebi:EbC_32370 resistance protein; TIGRFAM: Oxalate/Formate Antiporter; PFAM: major facilitator superfamily MFS_1 YP_004211765.1 PFAM: alpha/beta hydrolase fold; KEGG: cvi:CV_2920 hydrolase YP_004211766.1 KEGG: ebi:EbC_11880 hypothetical protein YP_004211767.1 TIGRFAM: penicillin-binding protein 2; KEGG: kpe:KPK_2538 penicillin-binding protein; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_004211768.1 KEGG: hde:HDEF_1936 RTX-family protein-22 YP_004211769.1 KEGG: hde:HDEF_1711 RTX-family protein-21 YP_004211770.1 KEGG: yen:YE1035 two-component system sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004211771.1 KEGG: spe:Spro_3652 hypothetical protein YP_004211772.1 KEGG: spe:Spro_3651 two component, sigma54 specific, fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; SMART: response regulator receiver; AAA ATPase YP_004211773.1 PFAM: nitrogen regulatory protein P-II; KEGG: spe:Spro_3649 nitrogen regulatory protein P-II 1 YP_004211774.1 KEGG: har:HEAR2556 hypothetical protein YP_004211775.1 PFAM: FAD dependent oxidoreductase; KEGG: har:HEAR2557 glucose dehydrogenase YP_004211776.1 KEGG: har:HEAR2558 alcohol dehydrogenase cytochrome c subunit precursor YP_004211777.1 PFAM: globin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: pwa:Pecwa_1230 nitric oxide dioxygenase YP_004211778.1 KEGG: spe:Spro_3638 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase YP_004211779.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE1049 3-phenylpropionic acid transporter YP_004211780.1 PFAM: PRD domain protein; KEGG: spe:Spro_3633 stationary phase inducible protein CsiE YP_004211781.1 PFAM: protein of unknown function DUF1007; KEGG: spe:Spro_3632 hypothetical protein YP_004211782.1 PFAM: high-affinity nickel-transporter; KEGG: spe:Spro_3631 high-affinity nickel-transporter YP_004211783.1 PFAM: inositol monophosphatase; KEGG: spe:Spro_3630 inositol monophosphatase YP_004211784.1 KEGG: yen:YE1055 SpoU family rRNA methylase; TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU) YP_004211785.1 KEGG: spe:Spro_3628 DNA-binding transcriptional regulator IscR; TIGRFAM: iron-sulfur cluster assembly transcription factor IscR; transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_004211786.1 TIGRFAM: cysteine desulfurase IscS; KEGG: eca:ECA3237 cysteine desulfurase; PFAM: aminotransferase class V YP_004211787.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: spe:Spro_3620 aminopeptidase B YP_004211788.1 KEGG: spe:Spro_3619 enhanced serine sensitivity protein SseB YP_004211789.1 PFAM: nucleoside diphosphate kinase; KEGG: spe:Spro_3613 nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase YP_004211790.1 KEGG: spe:Spro_3612 ribosomal RNA large subunit methyltransferase N; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein YP_004211791.1 TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: spe:Spro_3611 type IV pilus biogenesis/stability protein PilW; SMART: Tetratricopeptide repeat YP_004211792.1 KEGG: spe:Spro_3610 cytoskeletal protein RodZ; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004211793.1 KEGG: spe:Spro_3609 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein YP_004211794.1 TIGRFAM: histidyl-tRNA synthetase; KEGG: yen:YE1074 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein YP_004211795.1 PFAM: Protein of unknown function DUF2133; KEGG: spe:Spro_3607 hypothetical protein YP_004211796.1 TIGRFAM: outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone repeat-containing protein; KEGG: spe:Spro_3606 outer membrane protein assembly complex subunit YfgL; SMART: Pyrrolo-quinoline quinone beta-propeller repeat YP_004211797.1 KEGG: yen:YE1077 GTP-binding protein EngA; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related YP_004211798.1 PFAM: Auxin Efflux Carrier; KEGG: yen:YE1078 hypothetical protein YP_004211799.1 PFAM: protein of unknown function DUF1407; KEGG: ypg:YpAngola_A0411 hypothetical protein YP_004211800.1 KEGG: spe:Spro_3602 hypothetical protein YP_004211801.1 PFAM: peptidase M4 thermolysin; Peptidase M4 thermolysin; KEGG: enc:ECL_03848 zinc metalloprotease YP_004211802.1 KEGG: spe:Spro_3600 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_004211803.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3599 major facilitator transporter YP_004211804.1 PFAM: glycoside hydrolase family 31; KEGG: spe:Spro_3598 alpha-glucosidase YP_004211805.1 KEGG: spe:Spro_3597 exodeoxyribonuclease VII large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type YP_004211806.1 SMART: CBS domain containing protein; TIGRFAM: inosine-5'-monophosphate dehydrogenase; KEGG: yps:YPTB2833 inosine 5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein YP_004211807.1 KEGG: spe:Spro_3595 GMP synthase; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I YP_004211808.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; GAF domain protein; PAS fold-3 domain protein; KEGG: mms:mma_1577 sensory box protein; SMART: GGDEF domain containing protein; PAS domain containing protein; GAF domain protein YP_004211809.1 KEGG: rpf:Rpic12D_4017 ribosyldihydronicotinamide dehydrogenase (quinone); PFAM: NAD(P)H dehydrogenase (quinone) YP_004211810.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2459 LysR family transcriptional regulator YP_004211811.1 KEGG: ebd:ECBD_2209 uncharacterized lipoprotein YdcL YP_004211812.1 PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_3579 GCN5-related N-acetyltransferase YP_004211813.1 KEGG: eca:ECA3197 hydroxyethylthiazole kinase; PFAM: hydroxyethylthiazole kinase YP_004211814.1 TIGRFAM: phosphomethylpyrimidine kinase; KEGG: spe:Spro_3577 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1 YP_004211815.1 KEGG: ypy:YPK_1322 hypothetical protein YP_004211816.1 KEGG: spe:Spro_3567 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004211817.1 KEGG: enc:ECL_00183 transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004211818.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: cro:ROD_42321 hypothetical protein YP_004211819.1 PFAM: protein of unknown function DUF1680; KEGG: sed:SeD_A4064 hypothetical protein YP_004211820.1 TIGRFAM: chorismate mutase; KEGG: sew:SeSA_A1358 chorismate mutase; PFAM: Chorismate mutase, type II YP_004211821.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3565 major facilitator transporter YP_004211822.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: spe:Spro_3564 alcohol dehydrogenase YP_004211823.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: spe:Spro_3563 mandelate racemase/muconate lactonizing protein YP_004211824.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: apr:Apre_0576 malate/L-lactate dehydrogenase YP_004211825.1 PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_0691 oligogalacturonide transporter YP_004211826.1 KEGG: spe:Spro_3562 lipid kinase; PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region YP_004211827.1 PFAM: peptidase U32; KEGG: yen:YE1100 protease YP_004211828.1 PFAM: protein of unknown function DUF1508; KEGG: spe:Spro_3560 hypothetical protein YP_004211829.1 KEGG: spe:Spro_3557 DNA-binding transcriptional regulator BaeR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004211830.1 KEGG: spe:Spro_3556 signal transduction histidine-protein kinase BaeS; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004211831.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3555 multidrug efflux system protein MdtE YP_004211832.1 PFAM: aldo/keto reductase; KEGG: spe:Spro_3551 aldo/keto reductase YP_004211833.1 KEGG: spe:Spro_3548 chaperone YP_004211834.1 KEGG: spe:Spro_3954 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain-containing protein; Transketolase central region YP_004211835.1 KEGG: spe:Spro_3479 transaldolase A; TIGRFAM: transaldolase; PFAM: Transaldolase YP_004211836.1 PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; KEGG: spe:Spro_3472 malic enzyme YP_004211837.1 KEGG: spe:Spro_4396 purine nucleosidase; PFAM: Inosine/uridine-preferring nucleoside hydrolase YP_004211838.1 PFAM: protein of unknown function DUF188; KEGG: ypb:YPTS_2857 hypothetical protein YP_004211839.1 KEGG: spe:Spro_3464 coproporphyrinogen III oxidase; PFAM: coproporphyrinogen III oxidase YP_004211840.1 KEGG: spe:Spro_3463 N-acetylmuramoyl-L-alanine amidase I; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin YP_004211841.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ddc:Dd586_0782 GCN5-related N-acetyltransferase YP_004211842.1 PFAM: protein of unknown function DUF388, OB-fold; KEGG: spe:Spro_3461 hypothetical protein YP_004211843.1 KEGG: spe:Spro_3460 hypothetical protein YP_004211844.1 PFAM: protein of unknown function DUF1131; KEGG: spe:Spro_3459 hypothetical protein YP_004211845.1 KEGG: spe:Spro_3458 Dyp-type peroxidase family protein; TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase YP_004211846.1 KEGG: spe:Spro_3457 thiosulfate transporter subunit; TIGRFAM: sulfate ABC transporter periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_004211847.1 KEGG: eta:ETA_10910 sulfate/thiosulfate transporter subunit; TIGRFAM: sulfate ABC transporter inner membrane subunit CysT; sulfate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004211848.1 KEGG: spe:Spro_3455 sulfate/thiosulfate transporter permease subunit; TIGRFAM: sulfate ABC transporter inner membrane subunit; sulfate ABC transporter inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component YP_004211849.1 TIGRFAM: sulfate ABC transporter ATPase subunit; PFAM: ABC transporter related; KEGG: yen:YE1197 sulfate/thiosulfate transporter subunit; SMART: AAA ATPase YP_004211850.1 KEGG: eta:ETA_10940 cysteine synthase B (O-acetylserine sulfhydrolase B); TIGRFAM: cysteine synthase B; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein subunit beta YP_004211851.1 KEGG: spe:Spro_3452 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004211852.1 manually curated; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: spe:Spro_3451 integral membrane sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004211853.1 KEGG: yen:YE1205 PTS system glucose-specific transporter subunit; TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain YP_004211854.1 KEGG: spe:Spro_3449 phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region YP_004211855.1 KEGG: spe:Spro_3448 PTS system phosphohistidinoprotein-hexose phosphotransferase subunit HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_004211856.1 KEGG: spe:Spro_3447 cysteine synthase A; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein subunit beta YP_004211857.1 KEGG: spe:Spro_3446 sulfate transport protein CysZ YP_004211859.1 TIGRFAM: cell division protein ZipA; PFAM: ZipA FtsZ-binding region protein; KEGG: spe:Spro_3445 cell division protein ZipA; SMART: ZipA FtsZ-binding region protein YP_004211860.1 TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; helix-hairpin-helix motif; BRCT domain protein; KEGG: spe:Spro_3444 NAD-dependent DNA ligase LigA; SMART: NAD-dependent DNA ligase ; Helix-hairpin-helix DNA-binding class 1; BRCT domain protein YP_004211861.1 KEGG: pay:PAU_01410 hypothetical protein YP_004211862.1 PFAM: Bile acid:sodium symporter; KEGG: spe:Spro_3442 bile acid:sodium symporter YP_004211863.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3441 LysR family transcriptional regulator YP_004211864.1 KEGG: cko:CKO_00388 hypothetical protein YP_004211865.1 PFAM: protein of unknown function DUF925; KEGG: ypb:YPTS_2808 hypothetical protein YP_004211866.1 KEGG: kpu:KP1_1165 amino acid/amine transport protein; TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region YP_004211867.1 KEGG: spe:Spro_3436 ethanolamine ammonia lyase large subunit; PFAM: Ethanolamine ammonia lyase large subunit YP_004211868.1 KEGG: spe:Spro_3435 ethanolamine ammonia-lyase; PFAM: Ethanolamine ammonia-lyase light chain YP_004211869.1 KEGG: ddc:Dd586_3119 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain YP_004211870.1 PFAM: formate/nitrite transporter; KEGG: pam:PANA_2752 YrhG YP_004211871.1 KEGG: sgl:SG1675 nucleoside transport protein NupC; TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter domain protein; Na+ dependent nucleoside transporter; nucleoside recognition domain protein YP_004211872.1 KEGG: yen:YE1219 manganese transport protein MntH; TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein YP_004211873.1 PFAM: Protein of unknown function DUF2502; KEGG: pct:PC1_3425 hypothetical protein YP_004211874.1 PFAM: aldo/keto reductase; KEGG: spe:Spro_3413 aldo/keto reductase YP_004211875.1 PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; KEGG: spe:Spro_3412 thiamine pyrophosphate binding domain-containing protein YP_004211876.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: yen:YE1223 LysR family transcriptional regulator YP_004211877.1 PFAM: transmembrane pair domain-containing protein; KEGG: pwa:Pecwa_1025 transmembrane pair domain protein YP_004211878.1 KEGG: yen:YE1289 aspartate/glutamate racemase; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase YP_004211879.1 PFAM: Cl- channel voltage-gated family protein; KEGG: spe:Spro_3408 hypothetical protein YP_004211880.1 TIGRFAM: glucokinase; KEGG: efe:EFER_0780 glucokinase; PFAM: glucokinase YP_004211881.1 KEGG: yen:YE1227 two-component system response-regulator; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver YP_004211882.1 KEGG: yen:YE1228 two-component system histidine kinase; PFAM: histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_004211883.1 PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_3402 GCN5-related N-acetyltransferase YP_004211884.1 PFAM: aminotransferase class I and II; KEGG: spe:Spro_3401 aminotransferase YP_004211885.1 KEGG: pwa:Pecwa_2142 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004211886.1 PFAM: PEBP family protein; KEGG: tmz:Tmz1t_4061 protein of unknown function DUF524 YP_004211887.1 KEGG: pde:Pden_4339 response regulator receiver protein YP_004211888.1 KEGG: xca:xccb100_1412 transporter-like membrane protein YP_004211889.1 KEGG: avn:Avin_35800 hypothetical protein YP_004211890.1 PFAM: Curli production assembly/transport component CsgG; KEGG: ebd:ECBD_2562 curli production assembly/transport component CsgG YP_004211891.1 PFAM: Curli production assembly/transport component CsgF; KEGG: enc:ECL_02602 curli assembly protein CsgF YP_004211892.1 PFAM: Curli assembly protein CsgE; KEGG: ent:Ent638_1555 curli assembly protein CsgE YP_004211893.1 KEGG: ent:Ent638_1556 DNA-binding transcriptional regulator CsgD; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_004211894.1 PFAM: Curlin associated repeat-containing protein; KEGG: ent:Ent638_1557 curlin minor subunit YP_004211895.1 PFAM: Curlin associated repeat-containing protein; KEGG: cro:ROD_11011 major curlin subunit YP_004211896.1 PFAM: Curli production protein CsgC; KEGG: sfx:S1113 autoagglutination protein YP_004211897.1 KEGG: spe:Spro_2422 high-affinity nickel-transporter; TIGRFAM: high-affinity nickel-transporter; PFAM: high-affinity nickel-transporter YP_004211898.1 KEGG: spe:Spro_2423 (NiFe) hydrogenase maturation protein HypF; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase YP_004211899.1 KEGG: spe:Spro_2424 formate dehydrogenase subunit alpha; TIGRFAM: formate dehydrogenase, subunit alpha; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region YP_004211900.1 KEGG: spe:Spro_2425 electron transport protein HydN YP_004211901.1 KEGG: spe:Spro_2426 hydrogenase 3 maturation protease; TIGRFAM: hydrogenase maturation protease HycI; hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein YP_004211902.1 PFAM: formate hydrogenlyase maturation HycH; KEGG: spe:Spro_2427 formate hydrogenlyase maturation HycH YP_004211903.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: spe:Spro_2428 NADH ubiquinone oxidoreductase 20 kDa subunit YP_004211904.1 KEGG: spe:Spro_2429 formate hydrogenlyase complex iron-sulfur subunit YP_004211905.1 PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; nickel-dependent hydrogenase large subunit; NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: spe:Spro_2430 NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_004211906.1 KEGG: spe:Spro_2431 respiratory-chain NADH dehydrogenase subunit 1 YP_004211907.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: spe:Spro_2432 NADH dehydrogenase (quinone) YP_004211908.1 KEGG: spe:Spro_2433 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_004211909.1 KEGG: spe:Spro_2434 formate hydrogenlyase regulatory protein HycA YP_004211910.1 KEGG: spe:Spro_2435 hydrogenase nickel incorporation protein; TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA YP_004211911.1 KEGG: asa:ASA_1799 hydrogenase accessory protein HypB; TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K YP_004211912.1 KEGG: spe:Spro_2437 hydrogenase assembly chaperone HypC/HupF; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC) YP_004211913.1 KEGG: spe:Spro_2438 hydrogenase expression/formation protein HypD; TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein YP_004211914.1 KEGG: ddc:Dd586_2723 hydrogenase expression/formation protein HypE; TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_004211915.1 KEGG: spe:Spro_2440 NifA subfamily transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; GAF domain protein YP_004211916.1 KEGG: pam:PANA_4086 hypothetical protein YP_004211917.1 KEGG: pam:PANA_4087 hypothetical protein YP_004211918.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: kva:Kvar_2686 carboxymuconolactone decarboxylase YP_004211919.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_08050 transcriptional regulator protein, LysR family YP_004211920.1 PFAM: DNA polymerase II subunit beta; KEGG: spe:Spro_1941 DNA polymerase III subunit theta YP_004211921.1 KEGG: ecg:E2348C_3877 lipopolysaccharide core biosynthesis protein YP_004211922.1 KEGG: ara:Arad_2932 dienelactone hydrolase protein YP_004211923.1 PFAM: Glutathione S-transferase domain; KEGG: esa:ESA_00138 glutathione S-transferase YghU YP_004211924.1 KEGG: yen:YE3357 LacI-family regulatory protein; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_004211925.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: enc:ECL_00620 hypothetical protein YP_004211926.1 PFAM: oxidoreductase domain protein; KEGG: enc:ECL_00619 dehydrogenase YP_004211927.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: enc:ECL_00618 hypothetical protein YP_004211928.1 KEGG: cro:ROD_32731 major facilitator superfamily transporter YP_004211929.1 KEGG: eca:ECA0956 acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_004211930.1 KEGG: cko:CKO_05126 cytoplasmic membrane lipoprotein-28; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein YP_004211931.1 PFAM: Protein of unknown function DUF2326; KEGG: kko:Kkor_0200 hypothetical protein YP_004211932.1 KEGG: kko:Kkor_0199 hypothetical protein YP_004211933.1 KEGG: kko:Kkor_0198 hypothetical protein YP_004211934.1 KEGG: pct:PC1_0717 hypothetical protein YP_004211935.1 KEGG: pct:PC1_0715 hypothetical protein YP_004211936.1 KEGG: seh:SeHA_C2642 zinc-binding domain of primase-helicase family; PFAM: protein of unknown function DUF927; P4 alpha zinc-binding domain protein; TOPRIM domain-containing protein; SMART: P4 alpha zinc-binding domain protein; Toprim sub domain-containing protein YP_004211937.1 PFAM: integrase family protein; KEGG: ecw:EcE24377A_0981 phage integrase family site specific recombinase YP_004211938.1 KEGG: ses:SARI_03877 hypothetical protein YP_004211939.1 KEGG: ypy:YPK_4167 hypothetical protein YP_004211940.1 KEGG: eca:ECA2753 phage-related protein YP_004211941.1 PFAM: Prophage CP4-57 regulatory; KEGG: set:SEN1998 phage regulatory protein YP_004211942.1 PFAM: integrase family protein; KEGG: ecr:ECIAI1_4497 prophage integrase YP_004211943.1 PFAM: formate/nitrite transporter; KEGG: spe:Spro_3392 inner membrane protein YP_004211944.1 TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; KEGG: spe:Spro_3391 cytochrome c biogenesis protein CcmA; SMART: AAA ATPase YP_004211945.1 KEGG: yen:YE1264 heme exporter protein B; TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB YP_004211946.1 KEGG: spe:Spro_3389 heme exporter protein CcmC; TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein YP_004211947.1 KEGG: spe:Spro_3388 heme exporter protein D (CcmD); TIGRFAM: heme exporter protein CcmD; PFAM: Heme exporter protein D (CcmD) YP_004211948.1 PFAM: CcmE/CycJ protein; KEGG: spe:Spro_3387 cytochrome c-type biogenesis protein CcmE YP_004211949.1 KEGG: spe:Spro_3386 cytochrome c-type biogenesis protein CcmF; TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein YP_004211950.1 KEGG: spe:Spro_3385 periplasmic protein thiol--disulphide oxidoreductase DsbE; TIGRFAM: periplasmic protein thiol/disulphide oxidoreductase DsbE; PFAM: Redoxin domain protein YP_004211951.1 PFAM: cytochrome C biogenesis protein; KEGG: spe:Spro_3384 cytochrome c biogenesis protein YP_004211952.1 TIGRFAM: cytochrome c-type biogenesis protein CcmI; KEGG: spe:Spro_3383 TPR repeat-containing protein YP_004211953.1 PFAM: VacJ family lipoprotein; KEGG: spe:Spro_3382 VacJ family lipoprotein YP_004211954.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: yen:YE1274 long-chain fatty acid outer membrane transporter YP_004211955.1 PFAM: Conserved hypothetical protein CHP00743; KEGG: dda:Dd703_2599 hypothetical protein YP_004211956.1 TIGRFAM: acetyl-CoA C-acyltransferase FadI; acetyl-CoA acetyltransferase; KEGG: spe:Spro_3379 3-ketoacyl-CoA thiolase; PFAM: Thiolase-like YP_004211957.1 KEGG: spe:Spro_3378 multifunctional fatty acid oxidation complex subunit alpha; TIGRFAM: fatty acid oxidation complex, subunit alpha FadJ; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein YP_004211958.1 KEGG: spe:Spro_3377 phosphohistidine phosphatase; TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase YP_004211959.1 KEGG: ebd:ECBD_1328 hypothetical protein; PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2 YP_004211960.1 KEGG: spe:Spro_3375 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; TIGRFAM: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; modification methylase, HemK family; PFAM: methyltransferase small YP_004211961.1 TIGRFAM: chorismate synthase; KEGG: spe:Spro_3374 chorismate synthase; PFAM: chorismate synthase YP_004211962.1 PFAM: peptidase U6 penicillin-insensitive murein endopeptidase; KEGG: spe:Spro_3373 penicillin-insensitive murein endopeptidase YP_004211963.1 PFAM: protein of unknown function DUF81; KEGG: spe:Spro_3372 hypothetical protein YP_004211964.1 PFAM: protein of unknown function DUF462; KEGG: spe:Spro_3371 hypothetical protein YP_004211965.1 PFAM: YfcL protein; KEGG: spe:Spro_3370 YfcL protein YP_004211966.1 KEGG: spe:Spro_3369 5-methylaminomethyl-2-thiouridine methyltransferase; TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; PFAM: protein of unknown function DUF752; FAD dependent oxidoreductase YP_004211967.1 PFAM: Beta-ketoacyl synthase; KEGG: spe:Spro_3368 3-oxoacyl-(acyl carrier protein) synthase I YP_004211968.1 KEGG: plu:plu3520 hypothetical protein YP_004211969.1 KEGG: ebi:EbC_05650 iron-regulated membrane protein YP_004211970.1 PFAM: Citrate transporter; KEGG: spe:Spro_3360 citrate transporter YP_004211971.1 KEGG: eta:ETA_11630 regulatory protein GntR; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_004211972.1 KEGG: ebi:EbC_31170 probable rhodanese-related sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004211973.1 KEGG: yen:YE1298 flagella biosynthesis regulator YP_004211974.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: yen:YE1305 hypothetical protein YP_004211975.1 KEGG: ypb:YPTS_2716 AraC family transcriptional regulator; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004211976.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: spe:Spro_3336 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_004211977.1 KEGG: spe:Spro_3335 semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding YP_004211978.1 KEGG: dda:Dd703_2576 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain YP_004211979.1 PFAM: SNARE associated Golgi protein; KEGG: spe:Spro_3333 hypothetical protein YP_004211980.1 KEGG: spe:Spro_3332 acetyl-CoA carboxylase subunit beta; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, subunit beta; PFAM: carboxyl transferase YP_004211981.1 KEGG: spe:Spro_3331 bifunctional folylpolyglutamate synthase/dihydrofolate synthase; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004211982.1 PFAM: Sporulation domain-containing protein; KEGG: spe:Spro_3330 hypothetical protein YP_004211983.1 PFAM: Colicin V production protein; KEGG: pwa:Pecwa_1470 colicin V production protein YP_004211984.1 KEGG: yen:YE1315 amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase YP_004211985.1 KEGG: spe:Spro_3327 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein YP_004211986.1 TIGRFAM: cationic amino acid ABC transporter periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: spe:Spro_3326 cationic amino acid ABC transporter periplasmic binding protein; SMART: extracellular solute-binding protein family 3 YP_004211987.1 KEGG: spe:Spro_3325 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004211988.1 KEGG: spe:Spro_3324 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004211989.1 KEGG: spe:Spro_3323 histidine/lysine/arginine/ornithine transporter subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_004211990.1 TIGRFAM: peptidase T; KEGG: bba:Bd2900 peptidase T; PFAM: peptidase dimerisation domain protein; peptidase M20 YP_004211991.1 PFAM: extracellular solute-binding protein family 5; KEGG: enc:ECL_02029 extracellular solute-binding protein YP_004211992.1 PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; KEGG: spe:Spro_3322 hypothetical protein YP_004211993.1 PFAM: Glutathione S-transferase domain; KEGG: spe:Spro_3320 glutathione S-transferase domain-containing protein YP_004211994.1 PFAM: NUDIX hydrolase; KEGG: spe:Spro_3318 NUDIX hydrolase YP_004211995.1 KEGG: enc:ECL_03647 LacI family transcription regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_004211996.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: cro:ROD_27051 PTS system EIIA component YP_004211997.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: set:SEN2325 sugar phosphotransferase component II B YP_004211998.1 KEGG: spq:SPAB_00632 PTS system ascorbate-specific transporter subunit IIC YP_004211999.1 PFAM: Transketolase domain-containing protein; KEGG: cko:CKO_00492 hypothetical protein YP_004212000.1 PFAM: Transketolase domain-containing protein; Transketolase central region; KEGG: cko:CKO_00493 hypothetical protein YP_004212001.1 KEGG: ypb:YPTS_2692 phosphate acetyltransferase; TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; DRTGG domain protein YP_004212002.1 KEGG: spe:Spro_3316 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase YP_004212004.1 PFAM: protein of unknown function DUF412; KEGG: spe:Spro_3315 hypothetical protein YP_004212005.1 PFAM: YfbU family protein; KEGG: yen:YE1336 hypothetical protein YP_004212006.1 KEGG: spe:Spro_3313 phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004212007.1 PFAM: Citrate transporter; TrkA-C domain protein; KEGG: yen:YE1339 ion transport protein YP_004212008.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: spe:Spro_3311 hypothetical protein; SMART: metal-dependent phosphohydrolase HD region YP_004212009.1 PFAM: aminotransferase class I and II; KEGG: yen:YE1341 aminotransferase AlaT YP_004212010.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3309 LysR family transcriptional regulator YP_004212011.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: spe:Spro_3308 NADH dehydrogenase subunit A YP_004212012.1 TIGRFAM: NADH-quinone oxidoreductase, B subunit; KEGG: etr:ETAE_2384 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductase; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit YP_004212013.1 KEGG: spe:Spro_3306 bifunctional NADH:ubiquinone oxidoreductase subunit C/D; TIGRFAM: NADH dehydrogenase I, D subunit; NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_004212014.1 KEGG: cko:CKO_00511 NADH dehydrogenase subunit E; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_004212015.1 TIGRFAM: NADH-quinone oxidoreductase, F subunit; KEGG: yen:YE1348 NADH dehydrogenase I subunit F; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding YP_004212016.1 KEGG: spe:Spro_3303 NADH dehydrogenase subunit G; TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_004212017.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: yen:YE1350 NADH dehydrogenase subunit H YP_004212018.1 TIGRFAM: NADH-quinone oxidoreductase, chain I; KEGG: spe:Spro_3301 NADH dehydrogenase subunit I YP_004212019.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: ypb:YPTS_2674 NADH dehydrogenase subunit J YP_004212020.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: spe:Spro_3299 NADH dehydrogenase subunit K YP_004212021.1 KEGG: spe:Spro_3298 NADH dehydrogenase subunit L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein YP_004212022.1 KEGG: spe:Spro_3297 NADH dehydrogenase subunit M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_004212023.1 KEGG: yen:YE1356 NADH dehydrogenase subunit N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_004212024.1 PFAM: protein of unknown function DUF1097; KEGG: yen:YE1358 hypothetical protein YP_004212025.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: epy:EpC_12740 hypothetical protein YP_004212026.1 KEGG: ypp:YPDSF_1938 menaquinone-specific isochorismate synthase; TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like YP_004212027.1 KEGG: spe:Spro_3283 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate synthase; TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase YP_004212028.1 KEGG: eca:ECA1212 acyl-CoA thioester hydrolase YfbB; PFAM: alpha/beta hydrolase fold YP_004212029.1 KEGG: yen:YE1377 naphthoate synthase; TIGRFAM: naphthoate synthase; PFAM: Enoyl-CoA hydratase/isomerase YP_004212030.1 KEGG: eca:ECA1214 O-succinylbenzoate synthase; TIGRFAM: o-succinylbenzoic acid (OSB) synthetase YP_004212031.1 KEGG: ddd:Dda3937_01785 O-succinylbenzoate-CoA ligase; TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_004212032.1 KEGG: ypb:YPTS_1334 catalase domain-containing protein; PFAM: Catalase related subgroup; Catalase domain protein YP_004212033.1 PFAM: YfaZ family protein; KEGG: cro:ROD_26631 hypothetical protein YP_004212034.1 KEGG: spe:Spro_3275 competence damage-inducible protein A; TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein YP_004212035.1 PFAM: ferredoxin; KEGG: epy:EpC_12800 2Fe-2S ferredoxin YfaE YP_004212036.1 KEGG: spe:Spro_3272 ribonucleotide-diphosphate reductase subunit beta; PFAM: ribonucleotide reductase YP_004212037.1 KEGG: yen:YE1393 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, subunit alpha; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein; ATP-cone domain protein YP_004212038.1 KEGG: cqu:CpipJ_CPIJ002807 hypothetical protein YP_004212039.1 KEGG: efe:EFER_0932 adhesin; TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; polymorphic outer membrane protein; PFAM: Autotransporter beta- domain protein; Pertactin; Polymorphic membrane protein Chlamydia YP_004212040.1 TIGRFAM: ubiquinone biosynthesis O-methyltransferase; KEGG: spe:Spro_3270 3-demethylubiquinone-9 3-methyltransferase; PFAM: methyltransferase type 11 YP_004212041.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA gyrase, A subunit; KEGG: spe:Spro_3269 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_004212042.1 manually curated; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Signal transduction histidine kinase RcsC, alpha-beta loop-like; response regulator receiver; KEGG: spe:Spro_3268 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_004212043.1 KEGG: ebi:EbC_30380 capsular synthesis regulator component B; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver YP_004212044.1 KEGG: spe:Spro_3266 phosphotransfer intermediate protein in two-component regulatory system with RcsBC; PFAM: ATP-binding region ATPase domain protein; Hpt domain protein; SMART: ATP-binding region ATPase domain protein YP_004212045.1 SMART: PKD domain containing protein; KEGG: ebi:EbC_30340 hemagglutinin/hemolysin/adhesin-related protein YP_004212046.1 KEGG: ebi:EbC_30330 type I secretion protein; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein YP_004212047.1 TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: ebi:EbC_30320 type I secretion protein, ATP-binding protein; SMART: AAA ATPase YP_004212048.1 KEGG: ebi:EbC_30310 type I secretion membrane protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein YP_004212049.1 KEGG: pwa:Pecwa_0570 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein YP_004212050.1 PFAM: porin Gram-negative type; KEGG: spe:Spro_3264 outer membrane porin protein C YP_004212051.1 KEGG: spe:Spro_2833 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004212052.1 KEGG: etr:ETAE_1324 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_004212053.1 PFAM: DinI family protein; KEGG: dze:Dd1591_3349 DinI family protein YP_004212054.1 KEGG: dda:Dd703_2708 glutathione transferase YP_004212055.1 PFAM: sulfatase; KEGG: yen:YE1419 hypothetical protein YP_004212056.1 PFAM: protein of unknown function DUF1414; KEGG: yen:YE1420 hypothetical protein YP_004212057.1 PFAM: 37kDa nucleoid-associated protein; KEGG: ddc:Dd586_2386 37kDa nucleoid-associated protein YP_004212058.1 PFAM: Ribosomal protein L25-like; KEGG: spe:Spro_3254 50S ribosomal protein L25 YP_004212059.1 KEGG: spe:Spro_3253 type III restriction protein res subunit; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004212060.1 KEGG: spe:Spro_3252 16S rRNA pseudouridylate synthase A; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_004212061.1 KEGG: ypy:YPK_2792 bicyclomycin/multidrug efflux system; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004212062.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE1366 sugar transporter YP_004212063.1 KEGG: ypb:YPTS_2664 LacI family transcription regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_004212064.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ypb:YPTS_2666 gluconate 5-dehydrogenase YP_004212065.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rhi:NGR_b20270 oxidoreductase YP_004212066.1 KEGG: yen:YE1369 dehydrogenase, cytochrome c subunit; PFAM: cytochrome c class I YP_004212067.1 PFAM: FAD dependent oxidoreductase; KEGG: yen:YE1370 dehydrogenase subunit YP_004212068.1 KEGG: yen:YE1370A dehydrogenase subunit YP_004212069.1 KEGG: spe:Spro_3250 hypothetical protein YP_004212070.1 KEGG: ddc:Dd586_2375 ABC transporter; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004212071.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3248 binding-protein-dependent transport systems inner membrane component YP_004212072.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3247 binding-protein-dependent transport systems inner membrane component YP_004212073.1 PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE1430 substrate-binding transport protein YP_004212074.1 KEGG: spe:Spro_3245 hypothetical protein; PFAM: EAL domain protein; SMART: EAL domain protein YP_004212075.1 PFAM: NLP/P60 protein; KEGG: spe:Spro_3244 outer membrane lipoprotein YP_004212076.1 KEGG: spe:Spro_3242 phosphoesterase PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_004212077.1 PFAM: cobalamin synthesis protein P47K; KEGG: spe:Spro_3241 cobalamin synthesis protein P47K YP_004212078.1 KEGG: spe:Spro_3240 hypothetical protein YP_004212079.1 KEGG: ypb:YPTS_1405 GntR domain-containing protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004212080.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: spe:Spro_3239 mannitol dehydrogenase domain-containing protein YP_004212081.1 PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein YP_004212082.1 KEGG: ddc:Dd586_2369 elongation factor P-like protein YeiP; TIGRFAM: elongation factor P-like protein YeiP; PFAM: Elongation factor P ; Elongation factor P/YeiP protein; Elongation factor KOW-like domain-containing protein YP_004212083.1 PFAM: protein of unknown function UPF0153; KEGG: spe:Spro_3235 hypothetical protein YP_004212084.1 manually curated; TIGRFAM: sugar efflux transporter; KEGG: spe:Spro_3234 sugar efflux transporter; PFAM: major facilitator superfamily MFS_1 YP_004212085.1 KEGG: spe:Spro_3230 bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphoryl transfer system HPr YP_004212086.1 KEGG: spe:Spro_3229 1-phosphofructokinase; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein YP_004212087.1 TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose-specific, IIB subunnit; KEGG: yen:YE1449 PTS system fructose-specific transporter subunits IIBC; PFAM: phosphotransferase system EIIC YP_004212088.1 SMART: AP endonuclease family 2; TIGRFAM: apurinic endonuclease Apn1; KEGG: ebi:EbC_29990 endodeoxyribonuclease IV; PFAM: Xylose isomerase domain-containing protein TIM barrel YP_004212089.1 PFAM: Uncharacterised protein family UPF0324; KEGG: ypb:YPTS_1433 hypothetical protein YP_004212090.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3225 DNA-binding transcriptional regulator YP_004212091.1 PFAM: amino acid permease-associated region; KEGG: spe:Spro_3224 lysine transporter YP_004212092.1 PFAM: transport system permease protein; KEGG: ypb:YPTS_1438 transport system permease protein YP_004212093.1 KEGG: spe:Spro_3221 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004212094.1 KEGG: ebi:EbC_05260 phytase; TIGRFAM: 5'-nucleotidase, lipoprotein e(P4) family; PFAM: acid phosphatase (Class B) YP_004212095.1 PFAM: porin Gram-negative type; KEGG: esa:ESA_03112 hypothetical protein YP_004212096.1 SMART: helicase c2; DEAD-like helicase; KEGG: spe:Spro_1461 ATP-dependent DNA helicase DinG YP_004212097.1 PFAM: Glycosyl transferase, family 3-like; KEGG: eca:ECA2772 glycosyl transferase family protein YP_004212098.1 manually curated; TIGRFAM: alkylphosphonate utilization operon protein PhnA; KEGG: ddc:Dd586_0970 alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein YP_004212099.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: pct:PC1_1581 peptidase M3A and M3B thimet/oligopeptidase F YP_004212100.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: sbn:Sbal195_3989 flavoprotein oxygenase YP_004212101.1 KEGG: spe:Spro_1470 SAM-dependent methyltransferase; PFAM: protein of unknown function DUF890 YP_004212102.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: ypz:YPZ3_2157 chemotactic transducer; SMART: PAC repeat-containing protein; PAS domain containing protein; chemotaxis sensory transducer YP_004212103.1 KEGG: pct:PC1_3272 hypothetical protein YP_004212104.1 KEGG: pwa:Pecwa_2880 glutamine ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004212105.1 KEGG: yen:YE2846 glutamine ABC transporter permease protein; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004212106.1 TIGRFAM: cationic amino acid ABC transporter periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: set:SEN0775 glutamine ABC transporter periplasmic protein; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_004212107.1 KEGG: spe:Spro_1480 hypothetical protein YP_004212108.1 KEGG: ebr:ECB_02815 capsule polysaccharide export inner-membrane protein KpsE YP_004212109.1 PFAM: polysaccharide export protein; KEGG: ecq:ECED1_3595 polysialic acid transport protein precursor YP_004212110.1 PFAM: Capsule polysaccharide biosynthesis protein; KEGG: ecc:c3690 KpsC protein YP_004212111.1 PFAM: Capsule polysaccharide biosynthesis protein; KEGG: ecz:ECS88_3326 capsule polysaccharide export protein YP_004212112.1 SMART: Parallel beta-helix repeat; KEGG: rme:Rmet_5725 hypothetical protein YP_004212113.1 KEGG: ctu:Ctu_06110 hypothetical protein YP_004212114.1 KEGG: sna:Snas_5672 UDP-N-acetylglucosamine--lysosomal-enzyme N-acetylglucosamine phosphotransferase YP_004212115.1 PFAM: glycosyl transferase group 1; KEGG: ttu:TERTU_0695 glycosyltransferase family 4 domain protein YP_004212116.1 KEGG: ctu:Ctu_06090 capsular polysaccharide phosphotransferase LcbA YP_004212117.1 KEGG: ecc:c3697 KpsT protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004212118.1 PFAM: ABC transporter; KEGG: eum:ECUMN_3434 polysialic acid transport protein YP_004212119.1 PFAM: Ferritin Dps family protein; KEGG: spe:Spro_1481 DNA starvation/stationary phase protection protein Dps YP_004212120.1 PFAM: Anti-sigma K factor RskA; KEGG: yen:YE2841 hypothetical protein YP_004212121.1 KEGG: yen:YE2840 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_004212122.1 KEGG: yen:YE2839 hypothetical protein; PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin YP_004212124.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: cko:CKO_02307 threonine and homoserine efflux system YP_004212125.1 PFAM: virulence-related outer membrane protein; KEGG: cko:CKO_02304 outer membrane protein X YP_004212126.1 PFAM: oxidoreductase molybdopterin binding; KEGG: ebi:EbC_44120 oxidoreductase, molybdopterin binding YP_004212127.1 KEGG: ebi:EbC_44130 conserved uncharacterized protein YP_004212128.1 KEGG: ebi:EbC_44140 hypothetical protein YP_004212129.1 TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; KEGG: ddd:Dda3937_00228 DNA-binding heavy metal response regulator; SMART: response regulator receiver YP_004212130.1 TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: spe:Spro_1499 heavy metal sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004212131.1 PFAM: sulfatase; KEGG: spe:Spro_1859 phosphoethanolamine transferase YP_004212132.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: spe:Spro_3057 endonuclease/exonuclease/phosphatase YP_004212133.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pfo:Pfl01_2358 LysR family transcriptional regulator YP_004212134.1 KEGG: avn:Avin_09800 3-isopropylmalate dehydratase small subunit LeuD2; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain-containing protein YP_004212135.1 KEGG: avn:Avin_09810 isopropylmalate isomerase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain-containing protein YP_004212136.1 PFAM: alpha/beta hydrolase fold; KEGG: avn:Avin_09470 alpha/beta hydrolase fold protein YP_004212137.1 KEGG: spe:Spro_1512 choline transport protein BetT; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter YP_004212138.1 KEGG: ypb:YPTS_1277 transcriptional regulator BetI; TIGRFAM: transcriptional repressor BetI; PFAM: regulatory protein TetR YP_004212139.1 KEGG: spe:Spro_1514 betaine aldehyde dehydrogenase; TIGRFAM: betaine aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_004212140.1 KEGG: spe:Spro_1515 choline dehydrogenase; TIGRFAM: choline dehydrogenase; PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase YP_004212141.1 PFAM: GCN5-related N-acetyltransferase; KEGG: kpu:KP1_3906 transferase YP_004212142.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pfl:PFL_2263 LysR substrate binding domain-containing protein YP_004212143.1 PFAM: protein of unknown function DUF606; KEGG: enc:ECL_02097 hypothetical protein YP_004212144.1 PFAM: protein of unknown function DUF606; KEGG: esa:ESA_02965 hypothetical protein YP_004212145.1 PFAM: RES domain protein; KEGG: ypi:YpsIP31758_1792 hypothetical protein YP_004212146.1 KEGG: yen:YE2115 hypothetical protein YP_004212147.1 KEGG: enc:ECL_01169 nucleoside-specific channel-forming protein Tsx; manually curated; PFAM: Nucleoside-specific channel-forming protein, Tsx-like YP_004212148.1 KEGG: spe:Spro_1545 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004212149.1 KEGG: spe:Spro_1546 molybdopterin biosynthesis protein MoeB; TIGRFAM: molybdopterin synthase sulfurylase MoeB; PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein YP_004212150.1 KEGG: spe:Spro_1547 molybdopterin biosynthesis protein MoeA; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV YP_004212151.1 KEGG: etr:ETAE_0287 L-fucose operon activator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004212152.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ddd:Dda3937_00500 ISEch4 transposase YP_004212153.1 KEGG: yen:YE4059 autotransporter protein; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; Pertactin YP_004212154.1 PFAM: major facilitator superfamily MFS_1; KEGG: etr:ETAE_2780 hypothetical protein YP_004212155.1 KEGG: ebi:EbC_14450 L-asparaginase; PFAM: peptidase T2 asparaginase 2 YP_004212156.1 KEGG: ebi:EbC_14460 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004212157.1 PFAM: extracellular solute-binding protein family 5; KEGG: spe:Spro_1551 extracellular solute-binding protein YP_004212158.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_1552 binding-protein-dependent transport systems inner membrane component YP_004212159.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_1553 binding-protein-dependent transport systems inner membrane component YP_004212160.1 TIGRFAM: S-formylglutathione hydrolase; KEGG: spe:Spro_1556 S-formylglutathione hydrolase; PFAM: esterase YP_004212161.1 KEGG: spe:Spro_1557 S-(hydroxymethyl)glutathione dehydrogenase; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein YP_004212162.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_1558 LysR family transcriptional regulator YP_004212163.1 KEGG: yen:YE2819 hypothetical protein YP_004212164.1 TIGRFAM: GTP cyclohydrolase I; KEGG: pwa:Pecwa_1941 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase YP_004212165.1 PFAM: protein of unknown function DUF418; KEGG: yen:YE2817 hypothetical protein YP_004212167.1 KEGG: spe:Spro_1562 DNA-binding transcriptional regulator GalS; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_004212168.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE2815 galactose-binding protein YP_004212169.1 KEGG: yen:YE2814 galactose/methyl galaxtoside transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004212170.1 PFAM: inner-membrane translocator; KEGG: yen:YE2813 beta-methylgalactoside transporter inner membrane component YP_004212171.1 PFAM: protein of unknown function DUF218; KEGG: spe:Spro_1566 hypothetical protein YP_004212172.1 PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: spe:Spro_1567 malate dehydrogenase YP_004212173.1 TIGRFAM: cytidine deaminase; KEGG: spe:Spro_1568 cytidine deaminase; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding domain protein; CMP/dCMP deaminase zinc-binding YP_004212174.1 TIGRFAM: cationic amino acid ABC transporter periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: ddc:Dd586_2318 cationic amino acid ABC transporter periplasmic binding protein; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_004212175.1 KEGG: ypy:YPK_2713 arginine transporter permease subunit ArtM; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004212176.1 KEGG: spe:Spro_1654 arginine transporter permease subunit ArtQ; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004212177.1 TIGRFAM: cationic amino acid ABC transporter periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: yen:YE1495 arginine-binding periplasmic protein 1 precursor; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_004212178.1 KEGG: ypy:YPK_2710 arginine transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_004212179.1 KEGG: spe:Spro_1657 lipoprotein YP_004212180.1 PFAM: protein of unknown function DUF74; KEGG: spe:Spro_1658 hypothetical protein YP_004212181.1 KEGG: spe:Spro_1659 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2 YP_004212182.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: yen:YE1503 hypothetical protein YP_004212183.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: spe:Spro_1661 NAD-dependent epimerase/dehydratase YP_004212184.1 KEGG: yen:YE1505 L-threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase YP_004212185.1 PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; KEGG: spe:Spro_1664 pyruvate dehydrogenase YP_004212186.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: dda:Dd703_2272 HCP oxidoreductase, NADH-dependent YP_004212187.1 KEGG: ddd:Dda3937_02367 hybrid cluster protein [4Fe-2S-2O] protein in anaerobic terminal reductases; TIGRFAM: hybrid cluster protein; PFAM: Prismane YP_004212188.1 PFAM: protein of unknown function DUF340 membrane; KEGG: yen:YE1511 hypothetical protein YP_004212189.1 KEGG: spe:Spro_1668 hypothetical protein YP_004212190.1 PFAM: protein of unknown function DUF535; KEGG: spe:Spro_1669 hypothetical protein YP_004212191.1 TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein DNA-binding; KEGG: spe:Spro_1672 cold-shock DNA-binding domain-containing protein; SMART: Cold shock protein YP_004212192.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: spe:Spro_1673 ATP-dependent Clp protease adaptor protein ClpS YP_004212193.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: ATPase AAA-2 domain protein; AAA ATPase; Clp domain protein; Clp ATPase-like; KEGG: spe:Spro_1674 ATP-dependent Clp protease ATP-binding subunit; SMART: AAA ATPase YP_004212194.1 KEGG: pam:PANA_1335 InfA; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein YP_004212195.1 TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; KEGG: spe:Spro_1676 leucyl/phenylalanyl-tRNA--protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase YP_004212196.1 TIGRFAM: ABC transporter CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; KEGG: spe:Spro_1677 cysteine/glutathione ABC transporter membrane/ATP-binding component; SMART: AAA ATPase YP_004212197.1 SMART: AAA ATPase; manually curated; KEGG: spe:Spro_1678 cysteine/glutathione ABC transporter membrane/ATP-binding component; TIGRFAM: ABC transporter CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region YP_004212198.1 KEGG: ent:Ent638_1412 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004212199.1 KEGG: dze:Dd1591_2361 leucine-responsive transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004212200.1 PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: spe:Spro_1683 cell division protein FtsK/SpoIIIE YP_004212201.1 KEGG: yen:YE1526 outer-membrane lipoprotein carrier protein; TIGRFAM: outer membrane lipoprotein carrier protein LolA; PFAM: outer membrane lipoprotein carrier protein LolA YP_004212202.1 KEGG: spe:Spro_1685 recombination factor protein RarA; PFAM: AAA ATPase; SMART: AAA ATPase YP_004212203.1 KEGG: yen:YE1528 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like YP_004212204.1 KEGG: spe:Spro_1687 anaerobic dimethyl sulfoxide reductase subunit A; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region YP_004212205.1 KEGG: ecp:ECP_0908 anaerobic dimethyl sulfoxide reductase chain A precursor; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; Twin-arginine translocation pathway, signal sequence, subgroup; molydopterin dinucleotide-binding region YP_004212206.1 TIGRFAM: dimethylsulfoxide reductase, chain B; KEGG: ctu:Ctu_22110 anaerobic dimethyl sulfoxide reductase chain B YP_004212207.1 PFAM: DMSO reductase anchor subunit (DmsC); KEGG: yps:YPTB0807 anaerobic dimethyl sulfoxide reductase, subunit C YP_004212208.1 KEGG: dda:Dd703_2252 cytoplasmic chaperone TorD family protein YP_004212209.1 KEGG: etr:ETAE_2190 hypothetical protein YP_004212210.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE1530 MFS family transporter protein YP_004212211.1 TIGRFAM: pyruvate formate-lyase activating enzyme; KEGG: sea:SeAg_B0975 pyruvate formate lyase-activating enzyme 1; PFAM: Radical SAM domain protein YP_004212212.1 PFAM: integrase family protein; KEGG: eca:ECA2637 phage integrase YP_004212213.1 KEGG: pmr:PMI2006 phage repressor protein C YP_004212214.1 PFAM: Regulatory phage protein Cox; KEGG: eca:ECA2635 phage regulatory protein YP_004212215.1 KEGG: ecz:ECS88_2224 replication gene B protein (GpB) YP_004212216.1 KEGG: pct:PC1_3160 hypothetical protein YP_004212217.1 TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; KEGG: pct:PC1_3162 transcriptional regulator, TraR/DksA family YP_004212218.1 KEGG: ypy:YPK_0890 relication initiation protein YP_004212219.1 PFAM: replication gene A; KEGG: pct:PC1_3164 replication protein A YP_004212220.1 KEGG: oan:Oant_1158 hypothetical protein YP_004212221.1 KEGG: bch:Bcen2424_0193 hypothetical protein YP_004212222.1 KEGG: sek:SSPA2407 hypothetical protein YP_004212224.1 PFAM: AAA-4 family protein; KEGG: spl:Spea_1171 transcriptional regulator YP_004212225.1 KEGG: yps:YPTB1764 capsid portal protein; TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein YP_004212226.1 KEGG: ctu:Ctu_32400 terminase, ATPase subunit YP_004212227.1 PFAM: capsid scaffolding; KEGG: yps:YPTB1858 V protein phage 186 YP_004212228.1 KEGG: ent:Ent638_3499 P2 family phage major capsid protein; TIGRFAM: phage major capsid protein, P2 family; PFAM: major capsid protein P2 YP_004212229.1 PFAM: small terminase subunit; KEGG: pct:PC1_3174 small terminase subunit YP_004212230.1 PFAM: head completion protein; KEGG: yps:YPTB1758 phage head completion protein GpL YP_004212231.1 PFAM: tail X family protein; KEGG: yps:YPTB1757 phage-related tail protein YP_004212232.1 KEGG: spe:Spro_0872 prophage Hp1 family holin YP_004212233.1 PFAM: glycoside hydrolase family 24; KEGG: yps:YPTB1755 phage lysozyme YP_004212234.1 TIGRFAM: phage lysis regulatory protein, LysB family; KEGG: yps:YPTB1754 Orf27; P2 LysB homolog; control of lysis [Ente YP_004212235.1 KEGG: ecv:APECO1_4476 tail protein YP_004212236.1 TIGRFAM: phage virion morphogenesis protein; KEGG: ctu:Ctu_32300 tail completion protein S YP_004212237.1 KEGG: kpn:KPN_01312 hypothetical protein YP_004212238.1 TIGRFAM: phage baseplate assembly protein V; KEGG: spe:Spro_0869 phage baseplate assembly protein V YP_004212239.1 PFAM: GPW/gp25 family protein; KEGG: yps:YPTB1750 hypothetical protein YP_004212240.1 PFAM: Baseplate J family protein; KEGG: spe:Spro_0867 baseplate J family protein YP_004212241.1 TIGRFAM: phage tail protein I; KEGG: ecz:ECS88_2197 tail protein I (GPI) YP_004212242.1 PFAM: tail fiber repeat 2 protein; KEGG: ecz:ECS88_2196 phage tail fiber protein H (GpH) YP_004212243.1 PFAM: tail assembly chaperone gp38; KEGG: plu:plu3023 hypothetical protein YP_004212244.1 KEGG: spe:Spro_0863 tail sheath protein YP_004212245.1 KEGG: spe:Spro_0862 phage major tail tube protein; TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein YP_004212246.1 PFAM: tail E family protein; KEGG: spe:Spro_0861 tail E family protein YP_004212247.1 KEGG: dze:Dd1591_1812 P2 GpE family protein; manually curated; PFAM: P2 GpE family protein YP_004212248.1 KEGG: yps:YPTB1741 bacteriophage P2 tail protein gpT; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region YP_004212249.1 PFAM: P2 GpU family protein; KEGG: yps:YPTB1740 phage tail protein YP_004212250.1 KEGG: yps:YPTB1739 D protein bacteriophage 186 and P2 YP_004212251.1 KEGG: etr:ETAE_1308 hypothetical protein YP_004212252.1 PFAM: transcriptional activator Ogr/delta; KEGG: ecg:E2348C_2893 predicted DNA-binding transcriptional regulator YP_004212253.1 TIGRFAM: formate acetyltransferase; KEGG: spe:Spro_1702 formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical YP_004212254.1 KEGG: spe:Spro_1703 formate transporter; TIGRFAM: formate/nitrite transporter; PFAM: formate/nitrite transporter YP_004212255.1 PFAM: protein of unknown function DUF181; KEGG: spe:Spro_1704 hypothetical protein YP_004212256.1 TIGRFAM: phosphoserine aminotransferase; KEGG: ypg:YpAngola_A1952 phosphoserine aminotransferase; PFAM: aminotransferase class V YP_004212257.1 KEGG: cko:CKO_02164 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_004212258.1 TIGRFAM: cytidylate kinase; KEGG: spe:Spro_1708 cytidylate kinase; PFAM: cytidylate kinase region YP_004212259.1 KEGG: dze:Dd1591_2339 30S ribosomal protein S1; TIGRFAM: ribosomal protein S1; PFAM: RNA binding S1 domain protein YP_004212260.1 TIGRFAM: integration host factor, subunit beta; PFAM: histone family protein DNA-binding protein; KEGG: spe:Spro_1710 integration host factor subunit beta; SMART: histone family protein DNA-binding protein YP_004212261.1 KEGG: spe:Spro_1711 hypothetical protein; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein YP_004212262.1 TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter transmembrane region; ABC transporter related; KEGG: ecz:ECS88_0942 lipid transporter ATP-binding/permease protein; SMART: AAA ATPase YP_004212263.1 TIGRFAM: tetraacyldisaccharide 4'-kinase; KEGG: spe:Spro_1713 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase YP_004212264.1 KEGG: yen:YE1546 cold shock protein CspE2; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_004212265.1 KEGG: yen:YE1547 cold shock-like protein cspE3; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_004212266.1 PFAM: protein of unknown function DUF1006; KEGG: spe:Spro_1717 hypothetical protein YP_004212267.1 PFAM: protein of unknown function DUF343; KEGG: yen:YE1549 hypothetical protein YP_004212268.1 TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: ebi:EbC_15100 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase YP_004212269.1 PFAM: aminoglycoside phosphotransferase; KEGG: spe:Spro_1720 hypothetical protein YP_004212270.1 PFAM: protein of unknown function DUF218; KEGG: cro:ROD_09881 hypothetical protein YP_004212271.1 PFAM: methyltransferase type 11; KEGG: dze:Dd1591_2302 metallothionein SmtA YP_004212272.1 PFAM: chromosome segregation and condensation protein MukF; KEGG: spe:Spro_1723 condesin subunit F YP_004212273.1 PFAM: chromosome segregation and condensation protein MukE; KEGG: spe:Spro_1724 condesin subunit E YP_004212274.1 PFAM: chromosome segregation and condensation protein MukB domain protein; KEGG: spe:Spro_1725 cell division protein MukB YP_004212275.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; KEGG: spe:Spro_1726 hypothetical protein YP_004212276.1 PFAM: protein of unknown function DUF882; KEGG: spe:Spro_1727 hypothetical protein YP_004212277.1 KEGG: cro:ROD_09961 hypothetical protein YP_004212278.1 KEGG: spe:Spro_1729 aromatic amino acid aminotransferase; PFAM: aminotransferase class I and II YP_004212279.1 PFAM: porin Gram-negative type; KEGG: spe:Spro_1730 porin YP_004212280.1 TIGRFAM: asparaginyl-tRNA synthetase; KEGG: pct:PC1_1785 asparaginyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type YP_004212281.1 KEGG: spe:Spro_1732 nicotinate phosphoribosyltransferase; TIGRFAM: nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like YP_004212282.1 KEGG: spe:Spro_1734 aminopeptidase N; TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase YP_004212283.1 KEGG: spe:Spro_1735 aliphatic sulfonates transport ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_004212284.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_1736 binding-protein-dependent transport systems inner membrane component YP_004212285.1 TIGRFAM: alkanesulfonate monooxygenase, FMNH(2)-dependent; KEGG: ypz:YPZ3_3115 alkanesulfonate monooxygenase; PFAM: luciferase YP_004212286.1 KEGG: spe:Spro_1738 alkanesulfonate transporter substrate-binding subunit; TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3 YP_004212287.1 TIGRFAM: FMN reductase; KEGG: ypb:YPTS_3796 NAD(P)H-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase YP_004212288.1 TIGRFAM: dihydroorotate dehydrogenase; KEGG: ypb:YPTS_1543 dihydroorotate dehydrogenase 2; PFAM: dihydroorotate oxidase YP_004212289.1 PFAM: protein of unknown function DUF1379; KEGG: spe:Spro_1741 hypothetical protein YP_004212290.1 PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; ferredoxin; KEGG: spe:Spro_1742 MOSC domain-containing protein YP_004212291.1 KEGG: yen:YE1571 23S rRNA m(2)G2445 methyltransferase; PFAM: RNA methylase; THUMP domain-containing protein YP_004212292.1 KEGG: spe:Spro_1744 ABC transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase YP_004212293.1 KEGG: ypy:YPK_2639 PqiA family integral membrane protein; TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A YP_004212294.1 PFAM: Mammalian cell entry related domain protein; KEGG: spe:Spro_1746 paraquat-inducible protein B YP_004212295.1 PFAM: protein of unknown function DUF330; KEGG: yen:YE1575 lipoprotein protein YP_004212296.1 KEGG: ypb:YPTS_1551 ribosome modulation factor; manually curated; PFAM: ribosome modulation factor YP_004212297.1 TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA; KEGG: spe:Spro_1751 3-hydroxydecanoyl-(acyl carrier protein) dehydratase; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_004212298.1 KEGG: spe:Spro_1752 Lon protease YP_004212299.1 PFAM: protein of unknown function DUF1047; KEGG: spe:Spro_1753 hypothetical protein YP_004212300.1 PFAM: OmpA/MotB domain protein; KEGG: eay:EAM_1377 outer membrane protein A YP_004212301.1 PFAM: cell division inhibitor SulA; KEGG: spe:Spro_1755 SOS cell division inhibitor YP_004212302.1 PFAM: TfoX domain-containing protein; KEGG: ddd:Dda3937_02826 CRP-S promoter co-activator YP_004212303.1 TIGRFAM: hypothetical protein; integral membrane protein, YccS/YhfK family; KEGG: yen:YE1584 hypothetical protein YP_004212304.1 PFAM: protein of unknown function DUF307; KEGG: eca:ECA1755 hypothetical protein YP_004212305.1 PFAM: UvrD/REP helicase; KEGG: spe:Spro_1759 DNA helicase IV YP_004212306.1 TIGRFAM: methylglyoxal synthase; KEGG: dze:Dd1591_1215 methylglyoxal synthase; PFAM: MGS domain protein YP_004212307.1 PFAM: Protein of unknown function DUF2057; KEGG: spe:Spro_1761 hypothetical protein YP_004212308.1 PFAM: CoA-binding domain protein; KEGG: yen:YE1589 hypothetical protein YP_004212309.1 KEGG: bci:BCI_0412 heat shock protein HspQ; TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region YP_004212310.1 SMART: PUA domain containing protein; KEGG: spe:Spro_1764 PUA domain-containing protein YP_004212311.1 PFAM: acylphosphatase; KEGG: spe:Spro_1765 acylphosphatase YP_004212312.1 KEGG: dze:Dd1591_1220 sulfur relay protein, TusE/DsrC/DsvC family; TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC family protein YP_004212313.1 PFAM: protein of unknown function UPF0005; KEGG: pct:PC1_2537 hypothetical protein YP_004212314.1 KEGG: rlg:Rleg_1052 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004212315.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: gvi:glr1439 hypothetical protein YP_004212316.1 PFAM: extracellular solute-binding protein family 1; KEGG: spe:Spro_3949 extracellular solute-binding protein YP_004212317.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3948 binding-protein-dependent transport systems inner membrane component YP_004212318.1 KEGG: spe:Spro_3947 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004212319.1 KEGG: esa:ESA_01817 hypothetical protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; ligand binding Tar domain protein; SMART: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein YP_004212320.1 KEGG: esa:ESA_01329 hypothetical protein YP_004212321.1 PFAM: SmpA/OmlA domain-containing protein; KEGG: spe:Spro_3258 DNA-binding transcriptional activator OsmE YP_004212322.1 PFAM: sodium/hydrogen exchanger; TrkA-C domain protein; transporter-associated region; KEGG: ypb:YPTS_2590 potassium/proton antiporter YP_004212323.1 KEGG: hna:Hneap_1660 hypothetical protein YP_004212324.1 PFAM: FAD dependent oxidoreductase; KEGG: spe:Spro_2064 FAD dependent oxidoreductase YP_004212325.1 KEGG: kva:Kvar_3360 transcriptional regulator, XRE family; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004212326.1 KEGG: kpu:KP1_2005 gamma-glutamyl-gamma-aminobutyrate hydrolase; PFAM: peptidase C26 YP_004212327.1 PFAM: glutamine synthetase catalytic region; KEGG: spe:Spro_3216 glutamine synthetase catalytic region YP_004212329.1 PFAM: amino acid permease-associated region; KEGG: yen:YE2759 amino acid permease YP_004212330.1 PFAM: Exonuclease domain protein; Exonuclease RNase T and DNA polymerase III; KEGG: spe:Spro_3214 exonuclease I; SMART: Exonuclease YP_004212331.1 KEGG: spe:Spro_3209 hypothetical protein YP_004212332.1 PFAM: protein of unknown function DUF496; KEGG: ypb:YPTS_1683 hypothetical protein YP_004212333.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: spe:Spro_1336 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_004212334.1 KEGG: ypb:YPTS_3224 ABC transporter related; PFAM: ABC transporter related; TOBE domain-containing protein; SMART: AAA ATPase YP_004212335.1 PFAM: extracellular solute-binding protein family 1; KEGG: ypb:YPTS_3223 extracellular solute-binding protein YP_004212336.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypb:YPTS_3222 binding-protein-dependent transport systems inner membrane component YP_004212337.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypb:YPTS_3221 binding-protein-dependent transport systems inner membrane component YP_004212338.1 KEGG: ypb:YPTS_3220 glycosyl hydrolase 53 protein; PFAM: glycosyl hydrolase 53 domain protein YP_004212339.1 KEGG: pct:PC1_2962 beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein YP_004212340.1 PFAM: Phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: ypb:YPTS_3218 phosphotransferase system PTS EIIB protein YP_004212341.1 PFAM: porin LamB type; KEGG: enc:ECL_02641 maltoporin 1 YP_004212342.1 KEGG: ddc:Dd586_2927 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_004212343.1 PFAM: protein of unknown function DUF805; KEGG: kpe:KPK_4724 hypothetical protein YP_004212344.1 PFAM: protein of unknown function DUF1234; KEGG: pct:PC1_2842 hypothetical protein YP_004212345.1 TIGRFAM: triphosphoribosyl-dephospho-CoA synthase CitG; KEGG: ctu:Ctu_35610 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-As ynthase; PFAM: triphosphoribosyl-dephospho-CoA protein YP_004212346.1 TIGRFAM: holo-ACP synthase CitX; KEGG: ent:Ent638_3371 holo-ACP synthase; PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase YP_004212347.1 TIGRFAM: citrate lyase, subunit alpha; KEGG: ent:Ent638_3372 citrate lyase, subunit alpha; PFAM: Citrate lyase subunit alpha YP_004212348.1 TIGRFAM: citrate lyase, subunit beta; KEGG: ctu:Ctu_35640 citrate lyase subunit beta; PFAM: HpcH/HpaI aldolase YP_004212349.1 TIGRFAM: citrate lyase acyl carrier protein; KEGG: ddc:Dd586_2563 citrate lyase acyl carrier protein YP_004212350.1 SMART: Citrate lyase ligase domain protein; TIGRFAM: citrate lyase ligase; cytidyltransferase-related domain protein; KEGG: ddd:Dda3937_04561 citrate lyase synthetase; PFAM: Citrate lyase ligase domain protein; GCN5-related N-acetyltransferase YP_004212351.1 KEGG: ctu:Ctu_35670 hypothetical protein; PFAM: fumarylacetoacetate (FAA) hydrolase YP_004212352.1 PFAM: Citrate carrier protein; KEGG: cko:CKO_03359 hypothetical protein YP_004212353.1 KEGG: enc:ECL_04301 two-component system, CitB family, cit operon sensor histidine kinase CitA; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein YP_004212354.1 KEGG: enc:ECL_04302 two-component system, CitB family, response regulator CitB; PFAM: response regulator receiver; SMART: response regulator receiver YP_004212355.1 KEGG: ebi:EbC_28810 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_004212356.1 TIGRFAM: AMP nucleosidase; KEGG: eca:ECA1547 AMP nucleosidase; PFAM: AMP nucleoside phosphorylase-like; purine or other phosphorylase family 1 YP_004212357.1 PFAM: Glutathione S-transferase domain; KEGG: ebi:EbC_12300 glutathione S-transferase family protein YP_004212358.1 KEGG: ctu:Ctu_26880 shikimate transporter; TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: major facilitator superfamily MFS_1 YP_004212359.1 PFAM: pseudouridine synthase; KEGG: spe:Spro_3940 pseudouridine synthase YP_004212360.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbr:BB1990 LysR family regulatory protein YP_004212361.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pap:PSPA7_2236 short chain dehydrogenase YP_004212362.1 KEGG: kva:Kvar_0807 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004212363.1 TIGRFAM: oligosaccharide/H+ symporter, major facilitator superfamily (MFS); KEGG: kpu:KP1_4537 galactoside permease YP_004212364.1 TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32 domain protein; KEGG: kpu:KP1_4536 family 32 glycoside hydrolase; SMART: glycoside hydrolase family 32 YP_004212365.1 KEGG: kpu:KP1_4535 outer membrane protein YP_004212367.1 PFAM: MltA-interacting MipA family protein; KEGG: ebi:EbC_17550 conserved uncharacterized protein YP_004212369.1 KEGG: pam:PANA_3995 AcrA; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004212370.1 PFAM: acriflavin resistance protein; KEGG: enc:ECL_02244 RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family YP_004212371.1 PFAM: alpha/beta hydrolase fold; KEGG: spe:Spro_2663 dioxygenase YP_004212372.1 KEGG: pfs:PFLU2294 levansucrase; PFAM: glycoside hydrolase family 68 YP_004212373.1 KEGG: bur:Bcep18194_B0413 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004212374.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bur:Bcep18194_B0412 LysR family transcriptional regulator YP_004212375.1 PFAM: GCN5-related N-acetyltransferase; KEGG: enc:ECL_02140 acetyltransferase, GNAT family YP_004212376.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2455 LysR family transcriptional regulator YP_004212377.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2456 major facilitator transporter YP_004212378.1 KEGG: spe:Spro_2457 signal peptide protein YP_004212379.1 KEGG: sli:Slin_2181 hypothetical protein YP_004212380.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: enc:ECL_02248 transcriptional regulator, LysR family YP_004212381.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: enc:ECL_02247 NAD-dependent epimerase/dehydratase family protein YP_004212382.1 KEGG: rlg:Rleg_1861 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004212383.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: rpc:RPC_4092 zinc-binding alcohol dehydrogenase YP_004212384.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ent:Ent638_1879 LysR family transcriptional regulator YP_004212385.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: eca:ECA1483 NAD(P)H oxidoreductase YP_004212386.1 PFAM: YCII-related; KEGG: eca:ECA1484 hypothetical protein YP_004212387.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: ent:Ent638_1875 antibiotic biosynthesis monooxygenase YP_004212388.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: ebi:EbC_43640 pyridoxamine 5\'-phosphate oxidase family protein YP_004212390.1 KEGG: dda:Dd703_0041 lysine exporter protein (LysE/YggA); manually curated; PFAM: lysine exporter protein (LYSE/YGGA) YP_004212391.1 PFAM: Chorismate mutase, type II; KEGG: ebi:EbC_pEb17201570 chorismate mutase family protein YP_004212392.1 manually curated; KEGG: eca:ECA1481 hypothetical protein YP_004212393.1 KEGG: dze:Dd1591_2454 peroxiredoxin; PFAM: glutathione peroxidase YP_004212394.1 KEGG: eca:ECA1468 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004212395.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pwa:Pecwa_2990 binding-protein-dependent transport systems inner membrane component YP_004212396.1 PFAM: extracellular solute-binding protein family 1; KEGG: pwa:Pecwa_2989 extracellular solute-binding protein family 1 YP_004212397.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pwa:Pecwa_1289 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004212398.1 KEGG: set:SEN1367 conserved hypothetical DNA-binding protein; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein YP_004212399.1 PFAM: B3/4 domain protein; KEGG: spq:SPAB_01596 hypothetical protein YP_004212400.1 KEGG: ebi:EbC_28640 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004212401.1 KEGG: ebi:EbC_28630 oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004212402.1 KEGG: ebi:EbC_28620 oligopeptide/dipeptide ABC transporter permease and ATP-binding protein; PFAM: ABC transporter related; binding-protein-dependent transport systems inner membrane component; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004212403.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_28610 oligopeptide/dipeptide ABC transporter permease protein YP_004212404.1 PFAM: extracellular solute-binding protein family 5; KEGG: ebi:EbC_28600 oligopeptide/dipeptide ABC transporter solute-binding protein YP_004212405.1 PFAM: protein of unknown function DUF1028; KEGG: ebi:EbC_28590 conserved uncharacterized protein YP_004212407.1 PFAM: aminotransferase class I and II; KEGG: kpe:KPK_3294 aspartate transaminase YP_004212408.1 KEGG: atu:Atu5476 CTP synthase; PFAM: glutamine amidotransferase class-I YP_004212409.1 PFAM: dihydrodipicolinate synthetase; KEGG: kva:Kvar_3160 dihydrodipicolinate synthetase YP_004212410.1 PFAM: creatinase; peptidase M24; KEGG: kva:Kvar_3159 creatinase YP_004212411.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: kva:Kvar_3158 mandelate racemase/muconate lactonizing protein YP_004212412.1 KEGG: kpe:KPK_3289 peptidase, ArgE/DapE family; TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004212413.1 KEGG: ara:Arad_7100 general L-amino acid ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase YP_004212414.1 KEGG: kva:Kvar_3155 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004212415.1 KEGG: kpe:KPK_3286 amino acid ABC transporter periplasmic amino acid-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004212416.1 KEGG: kva:Kvar_3153 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004212417.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: kpe:KPK_3284 oxidoreductase, short chain dehydrogenase/reductase family YP_004212418.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3129 nitrogen assimilation transcriptional regulator YP_004212419.1 KEGG: esa:ESA_03321 hypothetical protein YP_004212420.1 PFAM: protein of unknown function DUF466; KEGG: ypb:YPTS_2225 hypothetical protein YP_004212421.1 PFAM: carbon starvation protein CstA; KEGG: spe:Spro_2639 carbon starvation protein CstA YP_004212422.1 PFAM: protein of unknown function Spy-related; KEGG: spe:Spro_4741 periplasmic protein YP_004212423.1 KEGG: ypi:YpsIP31758_2122 GntR family transcriptional regulator; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004212424.1 PFAM: sugar isomerase (SIS); KEGG: spe:Spro_4698 sugar isomerase (SIS) YP_004212425.1 KEGG: spe:Spro_4697 FGGY-family pentulose kinase; TIGRFAM: FGGY-family pentulose kinase; PFAM: Carbohydrate kinase, FGGY-like YP_004212426.1 PFAM: inner-membrane translocator; KEGG: spe:Spro_4696 monosaccharide-transporting ATPase YP_004212427.1 PFAM: inner-membrane translocator; KEGG: spe:Spro_4695 monosaccharide-transporting ATPase YP_004212428.1 KEGG: spe:Spro_4694 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004212429.1 KEGG: ebi:EbC_31200 ribose ABC transporter periplasmic binding protein YP_004212430.1 TIGRFAM: succinylornithine transaminase family; acetylornithine and succinylornithine aminotransferase; KEGG: spe:Spro_2844 bifunctional succinylornithine transaminase/acetylornithine transaminase; PFAM: aminotransferase class-III YP_004212431.1 TIGRFAM: arginine N-succinyltransferase; arginine/ornithine succinyltransferase subunit; KEGG: spe:Spro_2843 arginine succinyltransferase; PFAM: arginine N-succinyltransferase subunit beta YP_004212432.1 KEGG: spe:Spro_2842 succinylglutamic semialdehyde dehydrogenase; TIGRFAM: succinylglutamic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_004212433.1 TIGRFAM: succinylarginine dihydrolase; KEGG: spe:Spro_2841 succinylarginine dihydrolase; PFAM: Succinylarginine dihydrolase YP_004212434.1 TIGRFAM: succinylglutamate desuccinylase; KEGG: ypb:YPTS_2015 succinylglutamate desuccinylase; PFAM: Succinylglutamate desuccinylase/aspartoacylase YP_004212435.1 KEGG: spe:Spro_1932 amino acid/peptide transporter; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region YP_004212436.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: yen:YE2422 oxidoreductase YP_004212437.1 KEGG: spe:Spro_1934 hydrolase; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein YP_004212438.1 KEGG: spe:Spro_1935 cytoplasmic chaperone TorD family protein YP_004212439.1 KEGG: yen:YE2419 hypothetical protein YP_004212440.1 KEGG: cro:ROD_11241 glutaredoxin 2; TIGRFAM: glutaredoxin, GrxB family; PFAM: glutaredoxin 2 domain protein; Glutathione S-transferase domain YP_004212441.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE2418 multidrug resistance protein MdtH YP_004212442.1 KEGG: spe:Spro_2795 ribosomal-protein-S5-alanine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_004212443.1 PFAM: protein of unknown function DUF480; KEGG: pwa:Pecwa_2081 hypothetical protein YP_004212444.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: spe:Spro_2793 oxidoreductase domain-containing protein YP_004212445.1 KEGG: yen:YE2409 hypothetical protein; TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein YP_004212446.1 TIGRFAM: arginyl-tRNA synthetase; KEGG: spe:Spro_2791 arginyl-tRNA synthetase YP_004212447.1 PFAM: protein of unknown function DUF991; KEGG: spe:Spro_2790 hypothetical protein YP_004212448.1 PFAM: aminotransferase class I and II; KEGG: etr:ETAE_1428 aminotransferase class I and II YP_004212449.1 PFAM: CutC family protein; KEGG: spe:Spro_2788 copper homeostasis protein CutC YP_004212450.1 KEGG: ecz:ECS88_2910 conserved hypothetical protein; exported protein YP_004212452.1 KEGG: ebi:EbC_16730 hypothetical protein YP_004212453.1 KEGG: yen:YE2402 hypothetical protein; TIGRFAM: methyltransferase; PFAM: methyltransferase YP_004212454.1 KEGG: ypb:YPTS_2092 methyltransferase; TIGRFAM: methyltransferase; PFAM: methyltransferase type 11 YP_004212455.1 KEGG: ypb:YPTS_2093 hypothetical protein YP_004212456.1 PFAM: protein of unknown function DUF72; KEGG: ypb:YPTS_2094 hypothetical protein YP_004212457.1 PFAM: isochorismatase hydrolase; KEGG: spe:Spro_2783 hypothetical protein YP_004212458.1 KEGG: pct:PC1_1815 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein YP_004212459.1 PFAM: NUDIX hydrolase; KEGG: ypb:YPTS_2096 dATP pyrophosphohydrolase YP_004212460.1 PFAM: protein of unknown function DUF28; KEGG: spe:Spro_2779 hypothetical protein YP_004212461.1 TIGRFAM: crossover junction endodeoxyribonuclease RuvC; KEGG: dda:Dd703_2157 Holliday junction resolvase; PFAM: Crossover junction endodeoxyribonuclease RuvC YP_004212462.1 TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; KEGG: spe:Spro_2777 Holliday junction DNA helicase RuvA; SMART: Helix-hairpin-helix DNA-binding class 1 YP_004212463.1 TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase; Holliday junction DNA helicase RuvB domain; KEGG: spe:Spro_2776 Holliday junction DNA helicase RuvB; SMART: AAA ATPase YP_004212464.1 PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein YP_004212465.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: esa:ESA_02100 hypothetical protein YP_004212466.1 KEGG: enc:ECL_02391 symporter; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1 YP_004212467.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: asa:ASA_1608 LysR family transcriptional regulator YP_004212468.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: asa:ASA_1609 short-chain dehydrogenase/reductase SDR YP_004212469.1 TIGRFAM: PTS system, beta-glucoside-specific IIABC subunit; PTS system, glucose-like IIB subunint; PTS system, glucose subfamily, IIA subunit; KEGG: eca:ECA1870 PTS system beta-glucoside-specific transporter subunits IIABC; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_004212470.1 PFAM: glycoside hydrolase family 1; KEGG: pct:PC1_2438 glycoside hydrolase family 1 YP_004212471.1 PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: ent:Ent638_2741 transcriptional antiterminator, BglG YP_004212472.1 PFAM: amino acid permease-associated region; KEGG: spe:Spro_1347 amino acid permease-associated region YP_004212473.1 KEGG: eta:ETA_25860 hypothetical protein YP_004212474.1 KEGG: eta:ETA_25870 hypothetical protein YP_004212475.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pfs:PFLU2602 fumarylpyruvate hydrolase YP_004212476.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mms:mma_1110 short-chain dehydrogenase YP_004212477.1 PFAM: helix-turn-helix HxlR type; KEGG: kva:Kvar_3353 transcriptional regulator, HxlR family YP_004212478.1 KEGG: vei:Veis_0413 peptidase S15; TIGRFAM: hydrolase CocE/NonD family protein; PFAM: X-Pro dipeptidyl-peptidase domain protein YP_004212479.1 KEGG: vei:Veis_0412 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004212480.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0411 binding-protein-dependent transport systems inner membrane component YP_004212481.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0410 binding-protein-dependent transport systems inner membrane component YP_004212482.1 PFAM: extracellular solute-binding protein family 5; KEGG: vei:Veis_0409 extracellular solute-binding protein YP_004212483.1 KEGG: oan:Oant_2780 hypothetical protein YP_004212484.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: abn:AB57_2845 glycine cleavage system transcriptional activator YP_004212485.1 KEGG: spe:Spro_1440 transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_004212486.1 KEGG: pde:Pden_3345 hypothetical protein YP_004212487.1 KEGG: spe:Spro_1573 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, subunit beta; PFAM: tRNA synthetase class I (M); t-RNA-binding domain-containing protein YP_004212488.1 PFAM: ATPase-like, ParA/MinD; KEGG: spe:Spro_1574 ATPase YP_004212489.1 TIGRFAM: uridine kinase; KEGG: sbo:SBO_0893 uridine kinase YP_004212490.1 KEGG: yen:YE2782 deoxycytidine triphosphate deaminase; TIGRFAM: deoxycytidine triphosphate deaminase; PFAM: deoxyUTP pyrophosphatase YP_004212491.1 PFAM: AsmA family protein; KEGG: spe:Spro_1578 assembly protein YP_004212492.1 PFAM: Integral membrane protein TerC; CBS domain containing protein; transporter-associated region; KEGG: ypy:YPK_2549 integral membrane protein TerC YP_004212493.1 KEGG: yen:YE2778 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase YP_004212494.1 KEGG: yen:YE0173 dTDP-D-glucose-4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_004212495.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; KEGG: eca:ECA1442 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase YP_004212496.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: eay:EAM_2158 UDP-glucose epimerase YP_004212497.1 PFAM: ABC transporter; KEGG: epy:EpC_14020 O-antigen ABC transporter permease YP_004212498.1 KEGG: eay:EAM_2156 O-antigen export system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004212499.1 PFAM: glycosyl transferase family 8; KEGG: eta:ETA_13400 glycosyl transferase YP_004212500.1 TIGRFAM: UDP-galactopyranose mutase; KEGG: eay:EAM_2154 UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like; FAD dependent oxidoreductase YP_004212501.1 PFAM: glycosyl transferase family 2; KEGG: epy:EpC_14060 glycosyl transferase YP_004212502.1 PFAM: glycosyl transferase group 1; KEGG: ecm:EcSMS35_2263 glycosyl transferase, group 1 family protein YP_004212503.1 KEGG: gbr:Gbro_2791 hypothetical protein YP_004212504.1 TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; KEGG: ypb:YPTS_1663 6-phosphogluconate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase domain-containing protein; 6-phosphogluconate dehydrogenase NAD-binding YP_004212505.1 KEGG: yen:YE2772 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like; phosphoribosyl-AMP cyclohydrolase YP_004212506.1 KEGG: eok:G2583_2546 imidazole glycerol phosphate synthase subunit HisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein YP_004212507.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: spe:Spro_1611 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: histidine biosynthesis protein YP_004212508.1 KEGG: spe:Spro_1612 imidazole glycerol phosphate synthase subunit HisH; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I YP_004212509.1 TIGRFAM: histidinol-phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: yen:YE2768 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; PFAM: imidazoleglycerol-phosphate dehydratase YP_004212510.1 KEGG: spe:Spro_1614 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II YP_004212511.1 TIGRFAM: histidinol dehydrogenase; KEGG: ddd:Dda3937_02973 bifunctional histidinal dehydrogenase/histidinol dehydrogenase; PFAM: Histidinol dehydrogenase YP_004212512.1 TIGRFAM: ATP phosphoribosyltransferase; KEGG: spe:Spro_1616 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region; Histidine biosynthesis protein HisG domain YP_004212513.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: spe:Spro_1617 NAD-dependent epimerase/dehydratase YP_004212515.1 PFAM: flagellar transcriptional activator; KEGG: spe:Spro_2989 transcriptional activator FlhD YP_004212516.1 PFAM: flagellar transcriptional activator FlhC; KEGG: spe:Spro_2988 transcriptional activator FlhC YP_004212517.1 KEGG: ypb:YPTS_2486 flagellar motor protein MotA YP_004212518.1 PFAM: OmpA/MotB domain protein; KEGG: ypb:YPTS_2485 flagellar motor protein MotB YP_004212519.1 KEGG: yen:YE2577 chemotaxis protein CheA; PFAM: CheY binding protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; ATP-binding region ATPase domain protein; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein YP_004212520.1 KEGG: ypb:YPTS_2483 purine-binding chemotaxis protein; PFAM: CheW domain protein; SMART: CheW domain protein YP_004212521.1 PFAM: lambda integrase ; integrase family protein; KEGG: kpe:KPK_2863 site-specific recombinase, phage integrase family YP_004212522.1 KEGG: kpe:KPK_2862 hypothetical protein YP_004212523.1 PFAM: Protein of unknown function DUF2303; KEGG: pmr:PMI0900 prophage protein YP_004212524.1 KEGG: pmr:PMI0901 prophage protein YP_004212525.1 KEGG: eoh:ECO103_2405 TciB/TerA-like protein YP_004212526.1 KEGG: ecy:ECSE_1671 hypothetical protein YP_004212527.1 PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: ect:ECIAI39_4853 repressor protein phage E14; E14 prophage YP_004212528.1 KEGG: ecj:JW5169 predicted DNA-binding transcriptional regulator YP_004212529.1 KEGG: eum:ECUMN_0869 nucleic acid-binding protein; E14 prophage YP_004212530.1 KEGG: ppw:PputW619_2168 peptidase S8/S53 subtilisin kexin sedolisin YP_004212531.1 KEGG: cro:ROD_26171 hypothetical protein YP_004212532.1 PFAM: MT-A70 family protein; KEGG: yen:YE2361 adenine-specific modification methylase YP_004212533.1 PFAM: C-5 cytosine-specific DNA methylase; KEGG: cro:ROD_26151 prophage DNA cytosine methylase YP_004212535.1 PFAM: endodeoxyribonuclease RusA; KEGG: sec:SC1203 crossover junction endodeoxyribonuclease YP_004212536.1 PFAM: phage antirepressor protein; Phage regulatory protein, Rha-like; KEGG: pmr:PMI0910 phage antirepressor YP_004212537.1 SMART: HNH nuclease; KEGG: epy:EpC_20670 conserved uncharacterized protein YP_004212538.1 PFAM: antitermination Q family protein; KEGG: ecr:ECIAI1_2652 antitermination protein Q (P5) YP_004212539.1 KEGG: tte:TTE1424 flagellar biosynthesis protein FliR YP_004212540.1 KEGG: eic:NT01EI_1431 hypothetical protein YP_004212541.1 KEGG: sew:SeSA_A0628 bacteriophage protein YP_004212542.1 KEGG: sgl:SG1681 phage lysozyme lysis protein; PFAM: glycoside hydrolase family 24 YP_004212543.1 PFAM: lysis protein; KEGG: xbo:XBJ1_1386 endopeptidase YP_004212544.1 KEGG: pam:PANA_1758 hypothetical protein YP_004212545.1 KEGG: vpo:Kpol_1069p15 hypothetical protein YP_004212547.1 KEGG: ent:Ent638_2245 hypothetical protein YP_004212548.1 manually curated; KEGG: sed:SeD_A0651 hypothetical protein YP_004212549.1 manually curated; PFAM: HNH endonuclease; KEGG: ctu:Ctu_17410 hypothetical protein; SMART: HNH nuclease YP_004212550.1 TIGRFAM: phage terminase, small subunit, , P27 family; KEGG: ctu:Ctu_17430 hypothetical protein YP_004212551.1 PFAM: Terminase; KEGG: esa:ESA_01025 hypothetical protein YP_004212552.1 KEGG: sew:SeSA_A4463 phage portal protein, HK97 family; TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein YP_004212553.1 PFAM: peptidase S14 ClpP; KEGG: esa:ESA_01027 hypothetical protein YP_004212554.1 KEGG: ctu:Ctu_17470 hypothetical protein YP_004212555.1 KEGG: ctu:Ctu_17490 hypothetical protein YP_004212556.1 TIGRFAM: phage head-tail adaptor; KEGG: ent:Ent638_2233 phage head-tail adaptor YP_004212557.1 TIGRFAM: phage protein, HK97 gp10 family; KEGG: esa:ESA_01032 hypothetical protein YP_004212558.1 KEGG: ent:Ent638_2231 hypothetical protein YP_004212559.1 KEGG: ent:Ent638_2230 phage major tail subunit YP_004212560.1 PFAM: tail assembly chaperone; KEGG: ent:Ent638_2229 phage tail assembly chaperone YP_004212561.1 manually curated; KEGG: ctu:Ctu_17550 hypothetical protein YP_004212562.1 manually curated; TIGRFAM: phage tail tape measure protein, lambda family; phage tape measure protein; KEGG: ent:Ent638_2225 lambda family phage tail tape measure protein; PFAM: Tail length tape measure YP_004212563.1 PFAM: minor tail family protein; KEGG: ent:Ent638_2224 phage minor tail family protein YP_004212564.1 KEGG: ent:Ent638_2223 phage minor tail protein L; TIGRFAM: phage minor tail protein L; PFAM: minor tail protein L YP_004212565.1 KEGG: enc:ECL_01713 GP19; PFAM: NLP/P60 protein; SMART: Mov34/MPN/PAD-1 family protein YP_004212566.1 PFAM: lambda tail assembly I; KEGG: ent:Ent638_2220 bacteriophage lambda tail assembly I YP_004212567.1 PFAM: protein of unknown function DUF1983; Fibronectin type III domain protein; KEGG: ent:Ent638_2219 fibronectin, type III domain-containing protein YP_004212568.1 KEGG: sgl:SG1641 hypothetical protein YP_004212569.1 KEGG: ent:Ent638_2216 hypothetical protein YP_004212570.1 PFAM: acyltransferase 3; KEGG: ecr:ECIAI1_2620 O-acyltransferase, transmembrane YP_004212571.1 KEGG: azl:AZL_016110 transcriptional regulator; PFAM: ThiJ/PfpI domain-containing protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004212572.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2353 major facilitator transporter YP_004212573.1 KEGG: eca:ECA0275 hypothetical protein YP_004212574.1 KEGG: pct:PC1_0259 hypothetical protein YP_004212575.1 KEGG: spe:Spro_2983 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein YP_004212576.1 KEGG: spe:Spro_2982 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein YP_004212577.1 PFAM: MCP methyltransferase CheR-type; KEGG: dda:Dd703_1515 chemotaxis methyltransferase CheR; SMART: MCP methyltransferase CheR-type YP_004212578.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: spe:Spro_2980 chemotaxis-specific methylesterase; SMART: response regulator receiver YP_004212579.1 KEGG: epy:EpC_15450 chemotaxis regulatory protein CheY; PFAM: response regulator receiver; SMART: response regulator receiver YP_004212580.1 PFAM: Chemotaxis phosphatase CheZ; KEGG: spe:Spro_2978 chemotaxis regulator CheZ YP_004212581.1 KEGG: yen:YE2567 flagellar biosynthesis protein FlhB; TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter YP_004212582.1 KEGG: yen:YE2566 flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein YP_004212583.1 PFAM: flagellar FlhE family protein; KEGG: enc:ECL_01420 flagellar FlhE family protein YP_004212584.1 KEGG: sit:TM1040_3121 hypothetical protein YP_004212585.1 PFAM: FlgN family protein; KEGG: spe:Spro_2973 FlgN family protein YP_004212586.1 KEGG: pam:PANA_1462 FlgM; TIGRFAM: Anti-sigma-28 factor FlgM family protein; PFAM: Anti-sigma-28 factor FlgM family protein YP_004212587.1 KEGG: spe:Spro_2971 SAF domain-containing protein; TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein YP_004212588.1 KEGG: yen:YE2560 flagellar basal body rod protein FlgB; TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein YP_004212589.1 KEGG: yen:YE2559 flagellar basal body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein YP_004212590.1 PFAM: flagellar hook capping protein; KEGG: esa:ESA_02272 flagellar basal body rod modification protein YP_004212591.1 KEGG: yen:YE2557 flagellar hook protein FlgE; TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body FlaE domain protein; flagellar basal body rod protein; protein of unknown function DUF1078 domain protein YP_004212592.1 KEGG: spe:Spro_2966 flagellar basal body rod protein FlgF; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body protein; PFAM: flagellar basal body rod protein YP_004212593.1 KEGG: ypy:YPK_2420 flagellar basal body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_004212594.1 PFAM: flagellar L-ring protein; KEGG: ypb:YPTS_1805 flagellar basal body L-ring protein YP_004212595.1 PFAM: flagellar P-ring protein; KEGG: spe:Spro_2963 flagellar basal body P-ring protein YP_004212596.1 TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Flagellar protein FlgJ-like; KEGG: yen:YE2552 flagellar rod assembly protein/muramidase FlgJ; SMART: lysozyme subfamily 2 YP_004212597.1 KEGG: yen:YE2551 flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_004212598.1 KEGG: ctu:Ctu_16600 flagellar hook-associated protein FlgL; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein YP_004212599.1 PFAM: LrgB family protein; KEGG: yen:YE2791 hypothetical protein YP_004212600.1 PFAM: LrgA family protein; KEGG: etr:ETAE_1164 hypothetical protein YP_004212601.1 KEGG: kpu:KP1_2958 amino acid ABC transport system ATP-binding component; PFAM: ABC transporter related; SMART: AAA ATPase YP_004212602.1 KEGG: spe:Spro_1185 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004212603.1 PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_1186 GCN5-related N-acetyltransferase YP_004212604.1 KEGG: spe:Spro_2412 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004212605.1 TIGRFAM: amidohydrolase; KEGG: spe:Spro_1188 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004212606.1 KEGG: eca:ECA2161 luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: luciferase YP_004212607.1 TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; KEGG: eta:ETA_17410 monooxygenase YP_004212608.1 PFAM: regulatory protein TetR; KEGG: kpu:KP1_3577 TetR-family trancriptional regulatory protein YP_004212609.1 KEGG: kpu:KP1_3576 dehydrogenase; TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein YP_004212610.1 KEGG: yen:YE2673 chemotaxis protein; PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver YP_004212611.1 KEGG: bmr:BMI_I1728 hypothetical protein YP_004212612.1 PFAM: alpha/beta hydrolase fold; KEGG: azl:AZL_d00500 3-oxoadipate enol-lactonase YP_004212613.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: msl:Msil_3552 peptidyl-prolyl cis-trans isomerase cyclophilin type YP_004212614.1 KEGG: dda:Dd703_1411 hypothetical protein YP_004212615.1 KEGG: dda:Dd703_1412 beta-lactamase domain protein YP_004212616.1 PFAM: acyltransferase 3; KEGG: pwa:Pecwa_4612 acyltransferase 3 YP_004212617.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dda:Dd703_1413 transcriptional regulator, LysR family YP_004212618.1 TIGRFAM: 2-methylcitrate dehydratase; KEGG: bvi:Bcep1808_4405 2-methylcitrate dehydratase; PFAM: MmgE/PrpD family protein YP_004212619.1 KEGG: mgi:Mflv_4889 integral membrane sensor signal transduction histidine kinase YP_004212620.1 KEGG: bfa:Bfae_28180 arylsulfatase A family protein YP_004212621.1 KEGG: bur:Bcep18194_C6917 EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004212622.1 PFAM: secretion protein HlyD family protein; KEGG: kpe:KPK_B0020 auxiliary transport protein, membrane fusion protein (MFP) family YP_004212623.1 PFAM: protein of unknown function DUF1656; KEGG: kpe:KPK_B0021 hypothetical protein YP_004212624.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: kpe:KPK_B0022 fusaric acid resistance domain protein YP_004212625.1 KEGG: kpe:KPK_B0023 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004212626.1 PFAM: luciferase; KEGG: ddd:Dda3937_01241 alkanal monooxygenase subunit alpha YP_004212627.1 KEGG: ctu:Ctu_34980 catalase-peroxidase; TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase YP_004212628.1 PFAM: FAD linked oxidase domain protein; KEGG: ebi:EbC_27170 FAD-linked oxidase YP_004212629.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_27160 nitrate/sulfonate/bicarbonate ABC transporter permease component YP_004212630.1 KEGG: ebi:EbC_27150 nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004212631.1 KEGG: ebi:EbC_27140 nitrate/sulfonate/bicarbonate ABC transporter permease YP_004212632.1 PFAM: Creatininase; KEGG: ebi:EbC_27130 creatininase YP_004212633.1 PFAM: Endoribonuclease L-PSP; KEGG: ebi:EbC_27120 endoribonuclease L-PSP YP_004212634.1 KEGG: ebi:EbC_27110 amidohydrolase 3 YP_004212635.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: ebi:EbC_27100 vanillate O-demethylase oxidoreductase YP_004212636.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebi:EbC_27090 transcriptional regulator, LysR family YP_004212637.1 KEGG: ebi:EbC_27080 nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein YP_004212638.1 PFAM: amidohydrolase; KEGG: ebi:EbC_27070 amidohydrolase 1 YP_004212639.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: ebi:EbC_27060 2OG-Fe(II) oxygenase YP_004212640.1 KEGG: dze:Dd1591_1284 hypothetical protein YP_004212641.1 PFAM: Protein of unknown function DUF2058; KEGG: yen:YE2637 hypothetical protein YP_004212642.1 PFAM: PfkB domain protein; KEGG: cbe:Cbei_4798 ribokinase-like domain-containing protein YP_004212643.1 PFAM: sugar isomerase (SIS); KEGG: cbe:Cbei_4799 sugar isomerase (SIS) YP_004212644.1 TIGRFAM: cationic amino acid ABC transporter periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: acd:AOLE_05515 lysine-arginine-ornithine-binding periplasmic protein precursor; SMART: extracellular solute-binding protein family 3 YP_004212645.1 KEGG: ddr:Deide_3p00171 transcriptional regulator, GntR; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004212646.1 PFAM: regulatory protein TetR; KEGG: spe:Spro_3184 TetR family transcriptional regulator YP_004212647.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: ent:Ent638_2277 NADH:flavin oxidoreductase/NADH oxidase YP_004212648.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ent:Ent638_2278 short-chain dehydrogenase/reductase SDR YP_004212649.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ent:Ent638_2279 short chain dehydrogenase YP_004212650.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: ent:Ent638_1870 pyrroline-5-carboxylate reductase YP_004212651.1 KEGG: ent:Ent638_1871 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004212652.1 PFAM: regulatory protein TetR; KEGG: spe:Spro_3141 TetR family transcriptional regulator YP_004212653.1 KEGG: spe:Spro_3140 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004212654.1 PFAM: acriflavin resistance protein; KEGG: spe:Spro_3139 acriflavin resistance protein YP_004212655.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebi:EbC_28560 short chain dehydrogenase/reductase YP_004212656.1 PFAM: protein of unknown function DUF980; KEGG: spe:Spro_3110 hypothetical protein YP_004212657.1 manually curated; PFAM: EAL domain protein; KEGG: etr:ETAE_2294 hypothetical protein; SMART: EAL domain protein YP_004212658.1 PFAM: alpha/beta hydrolase fold; KEGG: spe:Spro_2332 alpha/beta hydrolase fold YP_004212659.1 PFAM: Phenolic acid decarboxylase; KEGG: cro:ROD_43231 phenolic acid decarboxylase YP_004212660.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dze:Dd1591_2089 transcriptional regulator, LysR family YP_004212661.1 PFAM: protein of unknown function DUF1705; sulfatase; KEGG: etr:ETAE_1218 sulfatase YP_004212662.1 KEGG: spe:Spro_2352 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase; PFAM: transferase hexapeptide repeat containing protein YP_004212663.1 KEGG: bam:Bamb_3454 hypothetical protein YP_004212664.1 PFAM: protein of unknown function DUF979; KEGG: bxe:Bxe_B0932 integral membrane protein YP_004212665.1 PFAM: protein of unknown function DUF969; KEGG: bxe:Bxe_B0933 hypothetical protein YP_004212666.1 PFAM: protein of unknown function DUF208; KEGG: spe:Spro_2683 hypothetical protein YP_004212667.1 KEGG: pct:PC1_0690 hypothetical protein YP_004212668.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: pap:PSPA7_2965 alcohol dehydrogenase YP_004212669.1 KEGG: spe:Spro_1812 hypothetical protein YP_004212670.1 PFAM: Ion transport protein; KEGG: spe:Spro_3053 ion transport protein YP_004212671.1 KEGG: yen:YE2590 cold shock-like protein CspC2; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_004212673.1 PFAM: Dextransucrase DSRB; KEGG: yen:YE2589 hypothetical protein YP_004212674.1 KEGG: yen:YE2588 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004212675.1 KEGG: pam:PANA_2308 RcsA; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_004212676.1 PFAM: glycosyl hydrolase family 88; KEGG: cko:CKO_04418 hypothetical protein YP_004212677.1 TIGRFAM: oligosaccharide/H+ symporter, major facilitator superfamily (MFS); KEGG: ctu:Ctu_14690 hypothetical protein YP_004212678.1 PFAM: Uncharacterised conserved protein UCP014753; KEGG: cro:ROD_35751 hypothetical protein YP_004212679.1 KEGG: ctu:Ctu_14710 hypothetical protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004212680.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: spe:Spro_3047 L-carnitine dehydratase/bile acid-inducible protein F YP_004212681.1 PFAM: periplasmic glucan biosynthesis protein MdoG; KEGG: set:SEN1430 glucan biosynthesis protein D YP_004212682.1 KEGG: spe:Spro_3041 hypothetical protein YP_004212683.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: ebi:EbC_25200 glycerol dehydrogenase YP_004212684.1 PFAM: protein of unknown function DUF445; KEGG: pam:PANA_0512 YjiN YP_004212685.1 PFAM: LysR substrate-binding; KEGG: bmj:BMULJ_04382 LysR family transcriptional regulator YP_004212687.1 TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; KEGG: pwa:Pecwa_3315 multidrug transporter membrane component/ATP-binding component; SMART: AAA ATPase YP_004212688.1 KEGG: esa:ESA_03469 hypothetical protein YP_004212689.1 PFAM: MscS Mechanosensitive ion channel; KEGG: pct:PC1_2869 MscS mechanosensitive ion channel YP_004212690.1 KEGG: yen:YE3630 cation efflux system protein; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein YP_004212691.1 KEGG: yen:YE3629 efflux system protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: biotin/lipoyl attachment domain-containing protein YP_004212692.1 PFAM: outer membrane efflux protein; KEGG: yen:YE3628 outer membrane efflux protein YP_004212693.1 KEGG: yen:YE3627 hypothetical protein YP_004212694.1 KEGG: spe:Spro_3366 hypothetical protein YP_004212695.1 KEGG: spe:Spro_1621 Mg2 transporter protein CorA family protein; TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein YP_004212696.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pau:PA14_46420 short chain dehydrogenase YP_004212697.1 KEGG: bpy:Bphyt_2008 transcriptional regulator, AraC family; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004212698.1 KEGG: ebi:EbC_14400 RND efflux system, outer membrane lipoprotein, NodT; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004212699.1 KEGG: enc:ECL_02910 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004212700.1 PFAM: secretion protein HlyD family protein; KEGG: enc:ECL_02911 multidrug resistance protein K YP_004212701.1 KEGG: sgl:SG1151 transport protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_004212702.1 PFAM: Alkaline phosphatase; KEGG: spe:Spro_1528 alkaline phosphatase; SMART: Alkaline phosphatase YP_004212703.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding lysin domain; KEGG: etr:ETAE_3093 ErfK/YbiS/YcfS/YnhG family protein YP_004212704.1 KEGG: pfl:PFL_0259 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004212705.1 PFAM: secretion protein HlyD family protein; KEGG: pfl:PFL_0258 HlyD family secretion protein YP_004212706.1 PFAM: regulatory protein TetR; KEGG: cak:Caul_5150 TetR family transcriptional regulator YP_004212707.1 KEGG: spe:Spro_2736 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor YP_004212708.1 PFAM: O-methyltransferase family 3; KEGG: kpe:KPK_2982 O-methyltransferase family protein YP_004212709.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: ddc:Dd586_2493 glycoside hydrolase family 3 domain protein YP_004212710.1 PFAM: Chromate transporter; KEGG: spe:Spro_2328 chromate transporter YP_004212711.1 PFAM: Chromate transporter; KEGG: spe:Spro_2327 chromate transporter YP_004212712.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2326 LysR family transcriptional regulator YP_004212713.1 SMART: regulatory protein ArsR; KEGG: yen:YE0809 ArsR family transcriptional regulator YP_004212714.1 KEGG: yen:YE0808 elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein YP_004212715.1 KEGG: msy:MS53_0229 phase-variable hemagglutinin YP_004212716.1 KEGG: vfm:VFMJ11_A0650 CcdB antidote CcdA YP_004212717.1 KEGG: spe:Spro_1813 TrpR binding protein WrbA; TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase YP_004212718.1 PFAM: protein of unknown function DUF1233 excisionase; KEGG: sed:SeD_A1075 excisionase YP_004212719.1 KEGG: kva:Kvar_0973 hypothetical protein YP_004212720.1 PFAM: protein of unknown function DUF1493; KEGG: pwa:Pecwa_0940 protein of unknown function DUF1493 YP_004212721.1 KEGG: ses:SARI_00061 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796 YP_004212722.1 KEGG: psa:PST_2721 TrpR binding protein WrbA YP_004212723.1 KEGG: cfa:477766 protein phosphatase 1, regulatory (inhibitor) subunit 3C YP_004212724.1 KEGG: ecg:E2348C_0424 hypothetical protein YP_004212725.1 PFAM: YadA domain-containing protein; KEGG: yen:YE1873 hypothetical protein YP_004212726.1 KEGG: sdy:SDY_0412 hypothetical protein YP_004212727.1 PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: ebi:EbC_26060 ethyl tert-butyl ether degradation protein YP_004212728.1 PFAM: sodium/hydrogen exchanger; KEGG: ebi:EbC_26080 sodium/hydrogen exchanger YP_004212729.1 PFAM: ABC transporter; KEGG: yen:YE2390 high-affinity zinc transporter membrane component YP_004212730.1 manually curated; PFAM: ABC transporter related; KEGG: spe:Spro_2774 high-affinity zinc transporter ATPase; SMART: AAA ATPase YP_004212731.1 KEGG: spe:Spro_2773 high-affinity zinc transporter periplasmic component; manually curated; PFAM: periplasmic solute binding protein YP_004212732.1 KEGG: spe:Spro_2772 hypothetical protein; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; Opacity-associated protein A domain protein; SMART: Peptidoglycan-binding LysM YP_004212733.1 KEGG: spe:Spro_2771 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; TIGRFAM: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; PFAM: lipid A biosynthesis acyltransferase YP_004212734.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_0092 major facilitator transporter YP_004212735.1 PFAM: IucA/IucC family protein; KEGG: ebi:EbC_25010 siderophore biosynthesis protein YP_004212736.1 KEGG: ebi:EbC_25000 L-lysine 6-monooxygenase (NADPH) YP_004212737.1 PFAM: Pyridoxal-dependent decarboxylase; KEGG: pam:PANA_0635 Ddc YP_004212738.1 TIGRFAM: pyruvate kinase; KEGG: spe:Spro_2770 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta YP_004212739.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: spe:Spro_2769 DNA-binding transcriptional regulator HexR YP_004212740.1 TIGRFAM: glucose-6-phosphate 1-dehydrogenase; KEGG: yen:YE2383 glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase YP_004212741.1 KEGG: spe:Spro_4500 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase YP_004212742.1 PFAM: Endoribonuclease L-PSP; KEGG: pam:PANA_2138 YoaB YP_004212743.1 SMART: helicase c2; DEAD-like helicase; KEGG: spe:Spro_2763 helicase C2 YP_004212744.1 PFAM: peptidase M22 glycoprotease; KEGG: ypb:YPTS_2116 peptidase M22 glycoprotease YP_004212745.1 KEGG: esa:ESA_01454 hypothetical protein; TIGRFAM: outer membrane lipoprotein, Slp family; PFAM: outer membrane lipoprotein Slp YP_004212746.1 PFAM: AMP-dependent synthetase and ligase; KEGG: spe:Spro_2760 long-chain-fatty-acid--CoA ligase YP_004212747.1 SMART: 3'-5' exonuclease; HRDC domain protein; TIGRFAM: ribonuclease D; KEGG: ypb:YPTS_2119 ribonuclease D; PFAM: 3'-5' exonuclease; HRDC domain protein YP_004212748.1 KEGG: yen:YE2373 cell division topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE YP_004212749.1 TIGRFAM: septum site-determining protein MinD; KEGG: dze:Dd1591_1996 cell division inhibitor MinD YP_004212750.1 KEGG: spe:Spro_2756 septum formation inhibitor; TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC YP_004212751.1 PFAM: protein of unknown function DUF709; KEGG: spe:Spro_2755 hypothetical protein YP_004212752.1 TIGRFAM: lytic murein transglycosylase; KEGG: ypb:YPTS_2124 lytic murein transglycosylase YP_004212753.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: ddd:Dda3937_02922 isomerase/hydrolase YP_004212754.1 PFAM: protein of unknown function UPF0153; KEGG: spe:Spro_2751 hypothetical protein YP_004212755.1 PFAM: Sigma-S stabilisation anti-adaptor protein; KEGG: ebi:EbC_11500 conserved uncharacterized protein YP_004212756.1 PFAM: protein of unknown function UPF0118; KEGG: spe:Spro_2050 hypothetical protein YP_004212757.1 KEGG: sco:SCO4415 integral membrane protein YP_004212758.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ddd:Dda3937_00500 ISEch4 transposase YP_004212759.1 PFAM: Disulphide bond formation protein DsbB; KEGG: ebi:EbC_24350 disulfide bond formation protein YP_004212760.1 KEGG: spe:Spro_2749 sodium/proton antiporter; TIGRFAM: Na+/H+ antiporter NhaB; PFAM: Na+H+ antiporter NhaB YP_004212761.1 TIGRFAM: fatty acid metabolism transcriptional regulator FadR; PFAM: fatty acid responsive transcription factor FadR domain protein; regulatory protein GntR HTH; KEGG: yen:YE2283 fatty acid metabolism regulator; SMART: regulatory protein GntR HTH YP_004212762.1 PFAM: SpoVR family protein; KEGG: spe:Spro_2747 SpoVR family protein YP_004212763.1 PFAM: alpha/beta hydrolase fold; KEGG: ebi:EbC_16970 conserved uncharacterized protein YP_004212764.1 TIGRFAM: selenium-binding protein YdfZ; KEGG: ent:Ent638_1936 cytoplasmic protein YP_004212766.1 PFAM: FAD dependent oxidoreductase; KEGG: spe:Spro_2746 D-amino acid dehydrogenase small subunit YP_004212767.1 TIGRFAM: alanine racemase; KEGG: spe:Spro_2745 alanine racemase; PFAM: alanine racemase domain protein YP_004212768.1 KEGG: spe:Spro_2744 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004212770.1 TIGRFAM: NAD+ synthetase; KEGG: enc:ECL_02441 NAD synthetase YP_004212771.1 PFAM: protein of unknown function DUF481; KEGG: spe:Spro_0878 hypothetical protein YP_004212772.1 PFAM: Polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: spe:Spro_4403 polypeptide-transport-associated domain-containing protein YP_004212773.1 KEGG: ctu:Ctu_1p01160 hypothetical protein; TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein YP_004212774.1 KEGG: ara:Arad_3589 hypothetical protein YP_004212775.1 PFAM: phosphotransferase KptA/Tpt1; KEGG: ddc:Dd586_3954 phosphotransferase KptA/Tpt1 YP_004212776.1 PFAM: Haemagluttinin repeat-containing protein; KEGG: spe:Spro_4402 filamentous haemagglutinin outer membrane protein YP_004212777.1 PFAM: protein of unknown function DUF638 hemagglutinin/hemolysin; KEGG: plu:plu1149 hypothetical protein YP_004212778.1 KEGG: jan:Jann_3881 hypothetical protein YP_004212779.1 KEGG: ent:Ent638_0055 hypothetical protein YP_004212780.1 KEGG: psp:PSPPH_5064 hypothetical protein YP_004212781.1 KEGG: rme:Rmet_4797 rhs-related transmembrane protein, YD repeat protein YP_004212783.1 PFAM: protein of unknown function DUF444; KEGG: ypb:YPTS_2141 hypothetical protein YP_004212784.1 KEGG: ctu:Ctu_18000 uncharacterized protein YeaG; PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein YP_004212785.1 PFAM: MltA-interacting MipA family protein; KEGG: yen:YE2271 hypothetical protein YP_004212786.1 PFAM: aldo/keto reductase; KEGG: ddc:Dd586_2164 aldo/keto reductase YP_004212787.1 PFAM: Aldose 1-epimerase; KEGG: spe:Spro_2729 aldose 1-epimerase YP_004212788.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: yen:YE2265 glyceraldehyde 3-phosphate dehydrogenase A; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_004212789.1 TIGRFAM: methionine-R-sulfoxide reductase; KEGG: spe:Spro_2727 methionine sulfoxide reductase B; PFAM: methionine sulfoxide reductase B YP_004212790.1 PFAM: protein of unknown function DUF1315; KEGG: ypb:YPTS_2148 hypothetical protein YP_004212791.1 KEGG: ddd:Dda3937_04576 nicotinamidase/pyrazinamidase; PFAM: isochorismatase hydrolase YP_004212792.1 KEGG: enc:ECL_02465 cytoplasmic asparaginase I; TIGRFAM: L-asparaginase, type I; PFAM: Asparaginase/glutaminase YP_004212793.1 KEGG: ypb:YPTS_2151 protease 4; TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: peptidase S49 YP_004212794.1 PFAM: nitroreductase; KEGG: spe:Spro_2721 hypothetical protein YP_004212795.1 TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; KEGG: spe:Spro_2718 DNA topoisomerase III; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein YP_004212796.1 PFAM: protein of unknown function DUF1496; KEGG: yen:YE2256 hypothetical protein YP_004212797.1 PFAM: NUDIX hydrolase; KEGG: spe:Spro_2716 pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase YP_004212798.1 KEGG: spe:Spro_2715 exonuclease III; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase YP_004212799.1 KEGG: spe:Spro_2617 DNA-binding transcriptional regulator TyrR; PFAM: sigma-54 factor interaction domain-containing protein; amino acid-binding ACT domain protein; SMART: AAA ATPase; PAS domain containing protein YP_004212800.1 PFAM: Redoxin domain protein; KEGG: ypb:YPTS_2338 thiol peroxidase YP_004212801.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: spe:Spro_2615 mandelate racemase/muconate lactonizing protein YP_004212802.1 PFAM: extracellular solute-binding protein family 5; KEGG: spe:Spro_2611 extracellular solute-binding protein YP_004212803.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE4032 hypothetical protein YP_004212804.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: yen:YE4033 LysR family transcriptional regulator YP_004212805.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: yen:YE2107 zinc transporter YP_004212806.1 KEGG: pam:PANA_1090 hypothetical protein YP_004212807.1 PFAM: PP-loop domain protein; KEGG: pct:PC1_2316 C32 tRNA thiolase YP_004212808.1 PFAM: protein of unknown function DUF903; KEGG: cko:CKO_03336 hypothetical protein YP_004212809.1 PFAM: protein of unknown function DUF903; KEGG: pam:PANA_1770 YgdI YP_004212810.1 PFAM: Na+/solute symporter; KEGG: msu:MS1741 PutP protein YP_004212811.1 KEGG: pwa:Pecwa_0310 hypothetical protein YP_004212812.1 PFAM: Heparinase II/III family protein; KEGG: vsp:VS_1247 hypothetical protein YP_004212813.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: spe:Spro_0121 short-chain dehydrogenase/reductase SDR YP_004212814.1 KEGG: vsp:VS_1251 transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004212815.1 KEGG: tau:Tola_1039 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain YP_004212816.1 PFAM: major facilitator superfamily MFS_1; KEGG: cmi:CMM_0553 sugar MFS-permease YP_004212817.1 PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: pjd:Pjdr2_2986 alpha-L-rhamnosidase YP_004212818.1 KEGG: yen:YE2102 pyruvate-flavodoxin oxidoreductase; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein YP_004212819.1 PFAM: protein of unknown function DUF333; KEGG: pam:PANA_2012 YdbJ YP_004212820.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: pay:PAU_02422 heat shock protein hslj YP_004212821.1 KEGG: ebi:EbC_25770 sugar ABC transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004212822.1 PFAM: extracellular solute-binding protein family 1; KEGG: ebi:EbC_25760 sugar ABC transporter extracellular solute-binding protein YP_004212823.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_25750 sugar ABC transporter permease protein YP_004212824.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pam:PANA_4091 AraQ YP_004212825.1 PFAM: metallophosphoesterase; KEGG: ebi:EbC_25730 metallophosphoesterase YP_004212826.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: ypb:YPTS_2324 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_004212827.1 KEGG: spe:Spro_2599 hypothetical protein YP_004212828.1 KEGG: eay:EAM_1814 lipoprotein YP_004212829.1 PFAM: Uncharacterised conserved protein UCP025560; KEGG: yen:YE2095 hypothetical protein YP_004212830.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: esa:ESA_01692 azoreductase YP_004212831.1 TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase-associated domain protein; helicase domain protein; protein of unknown function DUF1605; KEGG: spe:Spro_2595 ATP-dependent RNA helicase HrpA; SMART: DEAD-like helicase ; AAA ATPase; helicase domain protein YP_004212832.1 KEGG: yen:YE2087 protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap YP_004212833.1 KEGG: ebi:EbC_19960 hypothetical protein YP_004212834.1 KEGG: yen:YE2085 carboxypeptidase; PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase YP_004212835.1 KEGG: spe:Spro_2591 sensor protein RstB; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004212836.1 KEGG: spe:Spro_2590 DNA-binding transcriptional regulator RstA; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004212837.1 KEGG: spe:Spro_2588 hypothetical protein YP_004212838.1 KEGG: ebi:EbC_28870 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I YP_004212839.1 KEGG: ebi:EbC_28860 gluconate 2-dehydrogenase (acceptor); PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase YP_004212840.1 KEGG: ebi:EbC_28850 gluconate 2-dehydrogenase (acceptor) YP_004212841.1 KEGG: spe:Spro_2901 hypothetical protein YP_004212842.1 KEGG: spe:Spro_2900 transcriptional regulator NarL; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_004212843.1 KEGG: pct:PC1_2261 nitrate/nitrite sensor protein NarX; PFAM: histidine kinase dimerisation and phosphoacceptor region; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein YP_004212844.1 KEGG: spe:Spro_2898 nitrite transporter; TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1 YP_004212845.1 PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein YP_004212846.1 PFAM: protein of unknown function DUF156; KEGG: cro:ROD_29021 hypothetical protein YP_004212847.1 PFAM: high-affinity nickel-transporter; KEGG: sew:SeSA_A3193 nickel/cobalt efflux protein RcnA YP_004212848.1 KEGG: pam:PANA_1566 Bah YP_004212849.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: yen:YE2132 LysR family transcriptional regulator YP_004212850.1 PFAM: Protein of unknown function DUF2501; KEGG: spe:Spro_0994 hypothetical protein YP_004212851.1 SMART: HhH-GPD family protein; iron-sulfur cluster loop; TIGRFAM: endonuclease III; KEGG: ypb:YPTS_2230 endonuclease III; PFAM: HhH-GPD family protein; iron-sulfur cluster loop YP_004212852.1 KEGG: yen:YE1988 electron transport complex RsxE subunit; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; PFAM: RnfA-Nqr electron transport subunit YP_004212853.1 KEGG: ypb:YPTS_2232 electron transport complex protein RnfG; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein YP_004212854.1 KEGG: spe:Spro_2237 electron transport complex protein RnfD; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein YP_004212855.1 KEGG: spe:Spro_2239 electron transport complex, RnfABCDGE type, C subunit; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain YP_004212856.1 KEGG: spe:Spro_2240 electron transport complex protein RnfB; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: Fe-S cluster domain protein YP_004212857.1 KEGG: yen:YE1994 Na(+)-translocating NADH-quinone reductase subunit E; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit YP_004212858.1 PFAM: Protein of unknown function DUF2569; KEGG: yen:YE1996 hypothetical protein YP_004212859.1 KEGG: yen:YE2780 C4-dicarboxylate transporter DcuC; TIGRFAM: anaerobic c4-dicarboxylate antiporter, DcuC family; PFAM: C4-dicarboxylate anaerobic carrier-like YP_004212860.1 PFAM: monooxygenase FAD-binding; KEGG: spe:Spro_1429 hypothetical protein YP_004212861.1 KEGG: ebi:EbC_06810 transcription regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004212862.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: ebi:EbC_06820 cystathionine gamma-synthase protein YP_004212863.1 PFAM: extracellular solute-binding protein family 1; KEGG: ebi:EbC_06830 extracellular solute-binding protein, family 1 YP_004212864.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_06840 ABC-type sugar transport systems, permease component YP_004212865.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_06850 ABC-type sugar transport system, permease component YP_004212866.1 KEGG: ebi:EbC_06860 ABC-type sugar transport systems, ATPase component; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004212867.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2281 major facilitator transporter YP_004212868.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: yen:YE2022 LysR family transcriptional regulator YP_004212869.1 PFAM: ROK family protein; KEGG: spe:Spro_2283 ROK family protein YP_004212870.1 TIGRFAM: dethiobiotin synthase; KEGG: spe:Spro_2284 dethiobiotin synthase YP_004212871.1 KEGG: cci:CC1G_14977 hypothetical protein YP_004212872.1 KEGG: spe:Spro_2286 EmrB/QacA family drug resistance transporter; manually curated; PFAM: major facilitator superfamily MFS_1 YP_004212873.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA1345 ABC transporter permease protein YP_004212874.1 PFAM: extracellular solute-binding protein family 1; KEGG: pct:PC1_1221 extracellular solute-binding protein family 1 YP_004212875.1 KEGG: pct:PC1_1222 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004212876.1 KEGG: ypb:YPTS_2242 L-arabinose isomerase; PFAM: L-arabinose isomerase YP_004212877.1 KEGG: ypb:YPTS_2243 ribulokinase; TIGRFAM: L-ribulokinase; PFAM: Carbohydrate kinase, FGGY-like YP_004212878.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: eca:ECA2273 L-arabinose-binding periplasmic protein YP_004212879.1 KEGG: eca:ECA3326 hypothetical protein YP_004212880.1 KEGG: pct:PC1_2030 L-arabinose transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004212881.1 PFAM: inner-membrane translocator; KEGG: ent:Ent638_2474 L-arabinose transporter permease protein YP_004212882.1 KEGG: spe:Spro_2248 DNA-binding transcriptional regulator AraC; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004212883.1 TIGRFAM: mannonate dehydratase; KEGG: ddd:Dda3937_02522 mannonate dehydratase; PFAM: Mannonate dehydratase YP_004212884.1 KEGG: dze:Dd1591_4111 regulatory protein GntR HTH; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004212885.1 TIGRFAM: cellulose synthase operon protein YhjU; KEGG: yen:YE4078 hypothetical protein YP_004212886.1 TIGRFAM: celllulose biosynthesis operon protein BcsF/YhjT; KEGG: eca:ECA4365 hypothetical protein YP_004212887.1 TIGRFAM: cellulose biosynthesis protein BcsE; KEGG: spe:Spro_0145 hypothetical protein YP_004212888.1 KEGG: spe:Spro_0146 hypothetical protein YP_004212889.1 KEGG: yen:YE4075 hypothetical protein; TIGRFAM: cellulose synthase operon protein YhjQ; PFAM: Cellulose synthase operon protein YhjQ YP_004212890.1 KEGG: spe:Spro_0148 cellulose synthase catalytic subunit; TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ YP_004212891.1 PFAM: Cellulose synthase BcsB; KEGG: spe:Spro_0149 cellulose synthase regulator protein YP_004212892.1 PFAM: cellulose synthase operon C domain protein; Tetratricopeptide TPR_1 repeat-containing protein; KEGG: spe:Spro_0151 cellulose synthase subunit BcsC YP_004212893.1 KEGG: spe:Spro_2076 N-formylglutamate amidohydrolase; TIGRFAM: N-formylglutamate amidohydrolase; PFAM: N-formylglutamate amidohydrolase YP_004212894.1 TIGRFAM: imidazolonepropionase; KEGG: spe:Spro_2077 imidazolonepropionase; PFAM: amidohydrolase YP_004212895.1 TIGRFAM: histidine utilization repressor; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; KEGG: dze:Dd1591_1261 transcriptional regulator, histidine utilization repressor, GntR family; SMART: regulatory protein GntR HTH YP_004212896.1 KEGG: spe:Spro_2079 N-formimino-L-glutamate deiminase; TIGRFAM: formiminoglutamate deiminase; PFAM: amidohydrolase YP_004212897.1 PFAM: protein of unknown function DUF886; KEGG: spe:Spro_2080 hypothetical protein YP_004212898.1 SMART: extracellular solute-binding protein family 3; KEGG: reu:Reut_A2720 extracellular solute-binding protein YP_004212899.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddc:Dd586_2947 binding-protein-dependent transport systems inner membrane component YP_004212900.1 KEGG: ddd:Dda3937_01662 UreA carboxylase-related ABC transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase YP_004212901.1 TIGRFAM: histidine ammonia-lyase; KEGG: ebi:EbC_14140 histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase YP_004212902.1 TIGRFAM: urocanate hydratase; KEGG: dda:Dd703_2641 urocanate hydratase; PFAM: Urocanase YP_004212903.1 KEGG: dac:Daci_0154 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II YP_004212904.1 KEGG: tmz:Tmz1t_0668 (S)-mandelate dehydrogenase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase YP_004212905.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: ebi:EbC_14070 iron-containing alcohol dehydrogenase YP_004212906.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: oan:Oant_3576 short-chain dehydrogenase/reductase SDR YP_004212907.1 KEGG: smd:Smed_6307 hypothetical protein YP_004212908.1 TIGRFAM: histidinol dehydrogenase; KEGG: oan:Oant_3581 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase YP_004212909.1 KEGG: mlo:mlr7115 ABC-transport protein, ATP-binding component; PFAM: ABC transporter related; SMART: AAA ATPase YP_004212910.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr7114 ABC transporter permease protein YP_004212911.1 KEGG: mlo:mlr7112 hypothetical protein YP_004212912.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dda:Dd703_3519 transcriptional regulator, LysR family YP_004212913.1 KEGG: dda:Dd703_3518 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase YP_004212914.1 KEGG: dda:Dd703_3517 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004212915.1 KEGG: dda:Dd703_3516 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004212916.1 KEGG: dda:Dd703_3515 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004212917.1 PFAM: polysaccharide deacetylase; KEGG: dda:Dd703_3514 polysaccharide deacetylase YP_004212918.1 PFAM: polysaccharide deacetylase; KEGG: ebi:EbC_14040 polysaccharide deacetylase YP_004212919.1 PFAM: MmgE/PrpD family protein; KEGG: pfo:Pfl01_2858 MmgE/PrpD YP_004212920.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: spe:Spro_2249 oxidoreductase YP_004212921.1 KEGG: yen:YE2008 hypothetical protein YP_004212922.1 TIGRFAM: adenosine deaminase; KEGG: yen:YE2009 adenosine deaminase; PFAM: adenosine/AMP deaminase YP_004212923.1 PFAM: aminotransferase class I and II; KEGG: spe:Spro_2262 aminotransferase class I and II YP_004212924.1 TIGRFAM: PTS system, maltose and glucose-specific IIBC subunit; PTS system, maltose and glucose-specific subfamily, IIC subunit; PTS system, glucose-like IIB subunint; KEGG: yen:YE2011 bifunctional PTS system maltose and glucose-specific transporter subunits IICB; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_004212925.1 KEGG: spe:Spro_2271 DNA-binding transcriptional repressor MalI; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004212926.1 KEGG: eoh:ECO103_p27 colicin M resistance protein YP_004212927.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: ebi:EbC_20420 dehydrogenase YP_004212928.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: pfo:Pfl01_2334 2OG-Fe(II) oxygenase YP_004212929.1 KEGG: sme:SMc00562 transcription regulator protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004212930.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dal:Dalk_4724 glyoxalase/bleomycin resistance protein/dioxygenase YP_004212931.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: spe:Spro_3119 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_004212932.1 KEGG: spe:Spro_3120 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain-containing protein; SMART: Helix-turn-helix, AraC domain YP_004212933.1 PFAM: lytic transglycosylase catalytic; KEGG: spe:Spro_4233 lytic transglycosylase catalytic YP_004212934.1 KEGG: pen:PSEEN2914 hypothetical protein YP_004212935.1 PFAM: metallophosphoesterase; KEGG: esa:ESA_pESA3p05456 hypothetical protein YP_004212936.1 PFAM: protein of unknown function DUF437; KEGG: ddi:DDB_G0295809 UCP029143 family protein YP_004212937.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: ebi:EbC_22150 metal dependent phosphohydrolase YP_004212938.1 KEGG: rlg:Rleg_3129 transcriptional regulator, AraC family; PFAM: ThiJ/PfpI domain-containing protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004212939.1 KEGG: vap:Vapar_3245 DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase YP_004212940.1 KEGG: act:ACLA_099330 cation diffusion facilitator YP_004212941.1 KEGG: spe:Spro_2280 DNA replication terminus site-binding protein; TIGRFAM: DNA replication terminus site-binding protein; PFAM: site-binding protein DNA replication region YP_004212942.1 KEGG: spe:Spro_2279 fumarate hydratase; TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; Fumarase C-like YP_004212943.1 TIGRFAM: mannose-6-phosphate isomerase, class I; KEGG: spe:Spro_2277 mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I YP_004212944.1 PFAM: protein of unknown function DUF945; KEGG: spe:Spro_2276 hypothetical protein YP_004212945.1 KEGG: ebi:EbC_12190 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004212946.1 PFAM: Conserved hypothetical protein CHP00245; KEGG: ebi:EbC_12200 conserved uncharacterized protein YP_004212947.1 KEGG: pmy:Pmen_3833 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004212948.1 KEGG: eca:ECA0816 hypothetical protein YP_004212949.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pam:PANA_3313 ModB YP_004212950.1 PFAM: extracellular solute-binding protein family 1; KEGG: pam:PANA_3314 PotD YP_004212951.1 KEGG: pam:PANA_3315 FbpC; PFAM: ABC transporter related; SMART: AAA ATPase YP_004212952.1 KEGG: spe:Spro_2302 xanthine dehydrogenase accessory protein XdhC; TIGRFAM: xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182 YP_004212953.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; manually curated; KEGG: spe:Spro_2301 xanthine dehydrogenase molybdopterin binding subunit; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit YP_004212954.1 KEGG: spe:Spro_2300 xanthine dehydrogenase small subunit; TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain-containing protein; ferredoxin; CO dehydrogenase flavoprotein domain protein YP_004212955.1 PFAM: Tetracycline transcriptional regulator YcdC domain-containing protein; regulatory protein TetR; KEGG: vap:Vapar_4749 transcriptional regulator, TetR family YP_004212956.1 KEGG: spe:Spro_2299 guanine deaminase; TIGRFAM: guanine deaminase; PFAM: amidohydrolase YP_004212957.1 KEGG: spe:Spro_2298 ROK family protein; PFAM: ROK family protein; SMART: regulatory protein Crp YP_004212958.1 PFAM: extracellular solute-binding protein family 1; KEGG: spe:Spro_2297 extracellular solute-binding protein YP_004212959.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2296 binding-protein-dependent transport systems inner membrane component YP_004212960.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2295 binding-protein-dependent transport systems inner membrane component YP_004212961.1 PFAM: PfkB domain protein; KEGG: spe:Spro_2294 ribokinase-like domain-containing protein YP_004212962.1 KEGG: spe:Spro_2293 ABC transporter-related protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004212963.1 PFAM: aldo/keto reductase; KEGG: ara:Arad_2859 oxidoreductase protein YP_004212964.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pct:PC1_2050 3-hydroxy acid dehydrogenase YP_004212965.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: sgl:SG1135 transport protein YP_004212966.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eay:EAM_3341 LysR-family transcriptional regulator YP_004212967.1 PFAM: protein of unknown function UPF0060; KEGG: spe:Spro_2289 hypothetical protein YP_004212968.1 PFAM: protein of unknown function DUF1283; KEGG: yen:YE2026 hypothetical protein YP_004212969.1 PFAM: protein of unknown function DUF1161; KEGG: spe:Spro_2287 hypothetical protein YP_004212970.1 KEGG: pct:PC1_2084 hypothetical protein YP_004212971.1 KEGG: avn:Avin_30960 rhodanese-like protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004212972.1 KEGG: pfs:PFLU3685 hypothetical protein YP_004212973.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: psp:PSPPH_3611 LysR family transcriptional regulator YP_004212974.1 KEGG: ebi:EbC_32590 alkanesulfonate monooxygenase; PFAM: luciferase YP_004212975.1 KEGG: pag:PLES_25751 periplasmic aliphatic sulfonate-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3 YP_004212976.1 PFAM: ThiJ/PfpI domain-containing protein; KEGG: pam:PANA_1582 hypothetical protein YP_004212977.1 KEGG: cti:RALTA_A2347 hypothetical protein YP_004212978.1 PFAM: major facilitator superfamily MFS_1; KEGG: kpu:KP1_2796 permease of the major facilitator superfamily YP_004212979.1 KEGG: spe:Spro_2636 D-alanyl-D-alanine carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein YP_004212980.1 TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; KEGG: spe:Spro_2637 oxidoreductase alpha (molybdopterin) subunit; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase YP_004212981.1 SMART: Cold shock protein; TIGRFAM: exoribonuclease II; VacB and RNase II family 3'-5' exoribonuclease; KEGG: spe:Spro_2638 exoribonuclease II; PFAM: ribonuclease II; Ribonuclease B OB region domain YP_004212982.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2917 transcriptional regulator CysB-like protein YP_004212983.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: spe:Spro_2452 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_004212984.1 TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; KEGG: psa:PST_2142 glycogen operon protein GlgX; SMART: alpha amylase catalytic sub domain YP_004212985.1 PFAM: ApbE family lipoprotein; KEGG: ebi:EbC_30280 thiamine biosynthesis lipoprotein YP_004212986.1 KEGG: esa:ESA_01951 hypothetical protein; PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2 YP_004212987.1 TIGRFAM: mannosyl-3-phosphoglycerate phosphatase family; HAD-superfamily hydrolase, subfamily IIB; KEGG: ebi:EbC_26740 mannosyl-3-phosphoglycerate phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_004212988.1 KEGG: spe:Spro_2340 hypothetical protein YP_004212989.1 PFAM: Integral membrane protein TerC; KEGG: esa:ESA_01799 hypothetical protein YP_004212990.1 KEGG: ddc:Dd586_2030 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_004212991.1 PFAM: UspA domain-containing protein; KEGG: spe:Spro_2583 universal stress protein UspE YP_004212992.1 KEGG: yen:YE2077 pyridine nucleotide transhydrogenase; PFAM: NAD(P) transhydrogenase subunit beta YP_004212993.1 KEGG: yen:YE2078 NAD(P) transhydrogenase subunit alpha; TIGRFAM: NAD(P) transhydrogenase, subunit alpha; PFAM: alanine dehydrogenase/PNT domain protein YP_004212994.1 PFAM: protein of unknown function DUF1471; KEGG: spe:Spro_2586 hypothetical protein YP_004212995.1 KEGG: ebi:EbC_43470 renal dipeptidase; PFAM: peptidase M19 renal dipeptidase YP_004212996.1 PFAM: extracellular solute-binding protein family 5; KEGG: dze:Dd1591_3993 extracellular solute-binding protein family 5 YP_004212997.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_43490 dipeptide ABC transporter membrane spanning protein YP_004212998.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddd:Dda3937_03241 dipeptide transport system permease YP_004212999.1 KEGG: dze:Dd1591_3990 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004213000.1 KEGG: atu:Atu2514 ABC transporter nucleotide binding/ATPase protein (dipeptide); PFAM: ABC transporter related; SMART: AAA ATPase YP_004213001.1 PFAM: beta-lactamase; KEGG: spe:Spro_2075 beta-lactamase YP_004213002.1 KEGG: dda:Dd703_4011 oxidoreductase Fe-S binding subunit; TIGRFAM: glutamate synthase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004213003.1 PFAM: protein of unknown function DUF336; KEGG: spe:Spro_2088 hypothetical protein YP_004213004.1 KEGG: eay:EAM_1911 gluconate dehydrogenase subunit YP_004213005.1 PFAM: FAD dependent oxidoreductase; glucose-methanol-choline oxidoreductase; KEGG: ebi:EbC_05300 glucose-methanol-choline oxidoreductase YP_004213006.1 KEGG: spe:Spro_2085 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I YP_004213007.1 KEGG: esa:ESA_00559 hypothetical protein YP_004213008.1 KEGG: spe:Spro_1995 sulfate transporter YchM; TIGRFAM: sulfate transporter; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS YP_004213009.1 KEGG: spe:Spro_1994 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA YP_004213010.1 KEGG: yen:YE2428 transcriptional regulator YP_004213011.1 PFAM: Invasion gene expression up-regulator SirB; KEGG: yen:YE2429 hypothetical protein YP_004213012.1 KEGG: spe:Spro_1991 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: methyltransferase small YP_004213013.1 KEGG: spe:Spro_1990 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein YP_004213014.1 KEGG: spe:Spro_1989 glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; Shikimate/quinate 5-dehydrogenase YP_004213015.1 KEGG: ypz:YPZ3_1804 outer membrane lipoprotein LolB precursor; TIGRFAM: outer membrane lipoprotein LolB; PFAM: outer membrane lipoprotein LolB YP_004213016.1 TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: ypb:YPTS_2060 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein YP_004213017.1 TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: spe:Spro_1986 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_004213018.1 PFAM: Protein of unknown function DUF2583; KEGG: etr:ETAE_1400 hypothetical protein YP_004213019.1 TIGRFAM: peptidyl-tRNA hydrolase; KEGG: spe:Spro_1984 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase YP_004213020.1 KEGG: pae:PA2435 cation-transporting P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase YP_004213021.1 KEGG: pag:PLES_28571 hypothetical protein; PFAM: band 7 protein; SMART: band 7 protein YP_004213022.1 KEGG: pfl:PFL_6193 SPFH domain-containing protein; PFAM: band 7 protein; SMART: band 7 protein YP_004213023.1 PFAM: band 7 protein; KEGG: pfo:Pfl01_5670 band 7 protein YP_004213024.1 PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: spe:Spro_1983 sulphate transporter YP_004213025.1 KEGG: pct:PC1_2121 GTP-dependent nucleic acid-binding protein EngD; TIGRFAM: GTP-binding protein YchF; PFAM: protein of unknown function DUF933; GTP-binding protein HSR1-related YP_004213026.1 KEGG: dze:Dd1591_2455 hypothetical protein; PFAM: HNH endonuclease; SMART: HNH nuclease YP_004213027.1 KEGG: ebi:EbC_16040 TonB-dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor YP_004213028.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ddd:Dda3937_00500 ISEch4 transposase YP_004213029.1 KEGG: esa:ESA_pESA3p05442 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004213030.1 KEGG: enc:ECL_02241 DNA-binding response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004213031.1 PFAM: glycosyltransferase 36 associated; glycosyltransferase 36; carbohydrate binding; KEGG: spe:Spro_3285 glycosyltransferase 36 YP_004213032.1 PFAM: nitroreductase; KEGG: ebi:EbC_27860 nitroreductase YP_004213033.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: rle:RL0485 GGDEF/EAL domain-containing protein; SMART: EAL domain protein; GGDEF domain containing protein YP_004213034.1 KEGG: kpn:KPN_01851 regulatory protein MarR; PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; SMART: regulatory protein MarR YP_004213035.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: ebi:EbC_36230 transcriptional regulator, RpiR family YP_004213036.1 KEGG: ebi:EbC_36210 polar amino acid ABC transporter periplasmic ligand binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004213037.1 PFAM: Domain of unknown function DUF1989; KEGG: ebi:EbC_36200 conserved uncharacterized protein YP_004213038.1 PFAM: Domain of unknown function DUF1989; KEGG: ebi:EbC_36190 conserved uncharacterized protein YP_004213039.1 KEGG: ebi:EbC_36180 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004213040.1 KEGG: ebi:EbC_36170 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004213041.1 PFAM: Domain of unknown function DUF1989; KEGG: ebi:EbC_36160 conserved uncharacterized protein YP_004213042.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: ctu:Ctu_35470 hypothetical protein YP_004213043.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pam:PANA_0501 YafC YP_004213044.1 KEGG: xbo:XBJ1_1433 conserved hypothetical protein; exported protein YP_004213045.1 PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein YP_004213046.1 KEGG: ebi:EbC_17380 NADH:flavin oxidoreductase; TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; NADH:flavin oxidoreductase/NADH oxidase; FMN-binding domain protein YP_004213047.1 KEGG: ebi:EbC_17370 tartrate carrier (tartrate transporter) (tartrate/succinate antiporter); TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter YP_004213048.1 KEGG: dda:Dd703_1190 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004213049.1 PFAM: extracellular solute-binding protein family 5; KEGG: dda:Dd703_1189 extracellular solute-binding protein family 5 YP_004213050.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dda:Dd703_1188 binding-protein-dependent transport systems inner membrane component YP_004213051.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dda:Dd703_1187 binding-protein-dependent transport systems inner membrane component YP_004213052.1 PFAM: peptidase M20; KEGG: dda:Dd703_1186 peptidase M20 YP_004213053.1 KEGG: dda:Dd703_1185 pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; PFAM: Pyridoxal-5'-phosphate-dependent protein subunit beta YP_004213054.1 PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: dda:Dd703_1184 ornithine cyclodeaminase/mu-crystallin YP_004213055.1 KEGG: dda:Dd703_1183 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004213056.1 KEGG: dda:Dd703_1182 ABC transporter related; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004213057.1 KEGG: enc:ECL_A246 hypothetical protein YP_004213058.1 PFAM: Glutathione S-transferase domain; KEGG: kva:Kvar_2533 glutathione S-transferase domain protein YP_004213059.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kva:Kvar_2532 transcriptional regulator, LysR family YP_004213060.1 KEGG: psb:Psyr_3543 helix-turn-helix, AraC type:AraC-type transcriptional regulator, N-terminal; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004213061.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: psb:Psyr_3542 short-chain dehydrogenase/reductase SDR YP_004213062.1 KEGG: pam:PANA_1616 hypothetical protein YP_004213063.1 PFAM: alpha/beta hydrolase fold; KEGG: pmy:Pmen_3124 alpha/beta hydrolase fold YP_004213064.1 PFAM: protein of unknown function DUF1234; KEGG: nde:NIDE3617 hypothetical protein YP_004213065.1 KEGG: rso:RSc0128 transcription regulator protein; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004213066.1 KEGG: ent:Ent638_1863 hypothetical protein YP_004213067.1 KEGG: pct:PC1_2700 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004213068.1 KEGG: ent:Ent638_1861 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004213069.1 PFAM: MltA-interacting MipA family protein; KEGG: ent:Ent638_1860 MltA-interacting MipA family protein YP_004213070.1 KEGG: cps:CPS_3023 hypothetical protein YP_004213071.1 PFAM: protein of unknown function DUF1706; KEGG: eum:p1ECUMN_0142 hypothetical protein YP_004213072.1 KEGG: asa:ASA_1279 hypothetical protein YP_004213073.1 KEGG: kva:Kvar_2520 hypothetical protein YP_004213074.1 KEGG: bpy:Bphyt_0278 transcriptional regulator, MarR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004213075.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_0279 major facilitator superfamily MFS_1 YP_004213076.1 KEGG: ure:UREG_04406 hypothetical protein YP_004213077.1 KEGG: cbr:CBG22624 Hypothetical protein CBG22624 YP_004213079.1 KEGG: ebi:EbC_28530 GCN5-related N-acetyltransferase; manually curated; PFAM: GCN5-related N-acetyltransferase YP_004213080.1 KEGG: mav:MAV_2485 Tat-translocated enzyme; TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase YP_004213081.1 PFAM: Peptidase M75, Imelysin; KEGG: mpa:MAP1761c hypothetical protein YP_004213082.1 PFAM: iron permease FTR1; KEGG: mpa:MAP1762c hypothetical protein YP_004213083.1 PFAM: glycosyl transferase family 2; KEGG: rsk:RSKD131_0461 glycosyl transferase family protein YP_004213084.1 PFAM: SNARE associated Golgi protein; KEGG: rsq:Rsph17025_3619 hypothetical protein YP_004213085.1 KEGG: rcp:RCAP_rcc03247 ceramide glucosyltransferase YP_004213086.1 TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; KEGG: spe:Spro_2767 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; PFAM: KDPG and KHG aldolase YP_004213087.1 TIGRFAM: 6-phosphogluconate dehydratase; KEGG: spe:Spro_4499 phosphogluconate dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_004213088.1 TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; KEGG: spe:Spro_4497 gluconate kinase 1; PFAM: shikimate kinase YP_004213089.1 PFAM: protein of unknown function DUF1471; KEGG: ect:ECIAI39_0350 hypothetical protein YP_004213090.1 KEGG: spe:Spro_4478 sodium/hydrogen exchanger YP_004213091.1 KEGG: azl:AZL_016920 hypothetical protein YP_004213092.1 PFAM: regulatory protein TetR; KEGG: pam:PANA_4096 hypothetical protein YP_004213093.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: pmr:PMI2231 transport protein YP_004213094.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: avn:Avin_32390 zinc-containing alcohol dehydrogenase superfamily protein YP_004213095.1 TIGRFAM: histidine utilization repressor; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; KEGG: ebi:EbC_14200 transcriptional regulator, histidine utilization repressor, GntR family; SMART: regulatory protein GntR HTH YP_004213096.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ara:Arad_8407 enoyl-CoA hydratase protein YP_004213097.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: ara:Arad_8405 3-hydroxybutyryl-CoA dehydrogenase protein YP_004213098.1 KEGG: ara:Arad_8404 acyl-CoA transferases/L-carnitine dehydratase protein; PFAM: L-carnitine dehydratase/bile acid-inducible protein F YP_004213099.1 PFAM: phenylalanine/histidine ammonia-lyase; KEGG: pwa:Pecwa_4557 histidine ammonia-lyase YP_004213100.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pwa:Pecwa_4556 substrate-binding region of ABC-type glycine betaine transport system YP_004213101.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pwa:Pecwa_4555 binding-protein-dependent transport systems inner membrane component YP_004213102.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pwa:Pecwa_4554 binding-protein-dependent transport systems inner membrane component YP_004213103.1 KEGG: pwa:Pecwa_4553 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase YP_004213104.1 KEGG: cko:CKO_03040 hypothetical protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004213105.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: kva:Kvar_3375 phytanoyl-CoA dioxygenase YP_004213106.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebi:EbC_06410 transcriptional regulator, LysR-type YP_004213107.1 PFAM: Pirin domain protein; KEGG: ebi:EbC_06420 pirin domain protein YP_004213108.1 KEGG: ddd:Dda3937_03528 regulator for maltose metabolism YP_004213109.1 PFAM: GCN5-related N-acetyltransferase; KEGG: kva:Kvar_1670 GCN5-related N-acetyltransferase YP_004213110.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ara:Arad_7713 GCN5-family N-acetyltransferase YP_004213111.1 TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; KEGG: ara:Arad_7721 nitrilotriacetate monooxygenase protein component A YP_004213112.1 KEGG: bpu:BPUM_0349 amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004213113.1 KEGG: ara:Arad_14101 hypothetical protein; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004213114.1 KEGG: bsu:BSU39500 ABC transporter (binding lipoprotein); PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004213115.1 KEGG: bth:BT_2578 hypothetical protein YP_004213116.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eta:ETA_04780 GltK protein YP_004213117.1 KEGG: eta:ETA_04770 GltJ protein; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004213118.1 KEGG: eta:ETA_04760 GltL protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004213119.1 KEGG: eta:ETA_04750 probable ABC transporter periplasmic-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_004213120.1 KEGG: eta:ETA_17170 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_004213121.1 PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: eta:ETA_17180 nitrate reductase YP_004213122.1 KEGG: eta:ETA_17190 nitrite reductase [NAD(P)H] large subunit; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; nitrite reductase [NAD(P)H], small subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein YP_004213123.1 TIGRFAM: nitrate ABC transporter ATPase subunits C and D; PFAM: ABC transporter related; KEGG: eta:ETA_17200 nitrate transport protein; SMART: AAA ATPase YP_004213124.1 KEGG: eta:ETA_17210 nitrate transporter permease component; TIGRFAM: nitrate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004213125.1 KEGG: eta:ETA_17220 nitrate-binding protein YP_004213126.1 PFAM: ANTAR domain protein; KEGG: eta:ETA_17230 nitrate-and nitrite-responsive positive regulator YP_004213127.1 PFAM: protein of unknown function UPF0153; KEGG: alv:Alvin_3286 protein of unknown function UPF0153 YP_004213128.1 KEGG: seh:SeHA_C4731 hypothetical protein YP_004213129.1 KEGG: seh:SeHA_C4730 hypothetical protein YP_004213130.1 KEGG: enc:ECL_00748 regulatory protein, DeoR YP_004213131.1 KEGG: enc:ECL_00707 hypothetical protein YP_004213132.1 PFAM: glycoside hydrolase family 1; KEGG: pct:PC1_2140 cryptic 6-phospho-beta-glucosidase YP_004213133.1 TIGRFAM: PTS system, glucose-like IIB subunint; KEGG: yen:YE1256 PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_004213134.1 KEGG: ebi:EbC_17330 regulatory protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004213135.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; KEGG: ebi:EbC_03720 sensory box protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_004213136.1 KEGG: ebi:EbC_45130 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004213137.1 TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ebi:EbC_45140 oligopeptide ABC transporter ATP-binding protein; SMART: AAA ATPase YP_004213138.1 TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ent:Ent638_0752 oligopeptide/dipeptide ABC transporter ATPase subunit; SMART: AAA ATPase YP_004213139.1 PFAM: extracellular solute-binding protein family 5; KEGG: ebi:EbC_45160 oligopeptide ABC transporter oligopeptide-binding protein YP_004213140.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_45170 oligopeptide ABC transporter permease protein YP_004213141.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_45180 oligopeptide ABC transporter permease protein YP_004213142.1 KEGG: ebi:EbC_45190 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_004213143.1 PFAM: dihydrodipicolinate synthetase; KEGG: set:SEN3356 dihydrodipicolinate synthetase YP_004213144.1 KEGG: pmy:Pmen_2861 ferric iron reductase YP_004213145.1 KEGG: sil:SPO0591 TRAP dicarboxylate transporter, DctP subunit YP_004213146.1 KEGG: spe:Spro_2084 major facilitator transporter YP_004213147.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: rer:RER_12170 RpiR family transcriptional regulator YP_004213148.1 KEGG: dda:Dd703_2634 iron-containing alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase YP_004213149.1 PFAM: creatinase; peptidase M24; KEGG: dda:Dd703_0948 peptidase M24 YP_004213150.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: ddc:Dd586_3215 peptidase M20 YP_004213151.1 KEGG: ddc:Dd586_3214 ABC transporter; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004213152.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddd:Dda3937_03186 ABC transporter permease YP_004213153.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddd:Dda3937_03185 ABC transporter inner membrane protein YP_004213154.1 PFAM: extracellular solute-binding protein family 5; KEGG: dda:Dd703_0953 extracellular solute-binding protein family 5 YP_004213155.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: dda:Dd703_0954 peptidase dimerisation domain protein YP_004213156.1 KEGG: dda:Dd703_0955 transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004213157.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pct:PC1_4115 transcriptional regulator, LysR family YP_004213158.1 PFAM: peptidase M55 D-aminopeptidase; KEGG: dze:Dd1591_3975 peptidase M55 D-aminopeptidase YP_004213159.1 PFAM: peptidase S58 DmpA; KEGG: ddd:Dda3937_03248 D-aminopeptidease YP_004213160.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dda:Dd703_0144 binding-protein-dependent transport systems inner membrane component YP_004213161.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_43570 oligopeptide/dipeptide ABC transporter permease protein YP_004213162.1 PFAM: extracellular solute-binding protein family 5; KEGG: dda:Dd703_0146 extracellular solute-binding protein family 5 YP_004213163.1 KEGG: ebi:EbC_43590 oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004213164.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pam:PANA_4041 YcjG YP_004213165.1 PFAM: protein of unknown function DUF1611; KEGG: pam:PANA_4040 hypothetical protein YP_004213166.1 PFAM: porin Gram-negative type; KEGG: spe:Spro_2839 porin YP_004213168.1 KEGG: yen:YE1748 ABC transporter ATP-binding protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_004213169.1 KEGG: gtn:GTNG_2814 prophage LambdaBa01, membrane protein YP_004213170.1 KEGG: mno:Mnod_2480 peptidase C14 caspase catalytic subunit P20 YP_004213171.1 PFAM: aminotransferase class IV; KEGG: tau:Tola_0563 aminotransferase class IV YP_004213172.1 KEGG: ebi:EbC_09020 major facilitator superfamily transporter YP_004213173.1 TIGRFAM: respiratory nitrate reductase, subunit gamma; KEGG: spe:Spro_2880 respiratory nitrate reductase, subunit gamma; PFAM: Nitrate reductase subunit gamma YP_004213174.1 TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; KEGG: pct:PC1_2257 nitrate reductase molybdenum cofactor assembly chaperone; PFAM: TorD-like chaperone YP_004213175.1 TIGRFAM: nitrate reductase, subunit beta; KEGG: ebi:EbC_35040 nitrate reductase 1 beta chain YP_004213176.1 TIGRFAM: nitrate reductase, subunit alpha; KEGG: pwa:Pecwa_2564 nitrate reductase, subunit alpha; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region YP_004213177.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: spe:Spro_2558 Mg2 transporter protein CorA family protein YP_004213178.1 PFAM: Cl- channel voltage-gated family protein; CBS domain containing protein; KEGG: eta:ETA_29020 Cl-channel, voltage gated YP_004213179.1 KEGG: ebi:EbC_28780 conserved uncharacterized protein YP_004213180.1 PFAM: plasmid maintenance system killer; KEGG: pct:PC1_3184 plasmid maintenance system killer YP_004213181.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: pct:PC1_3183 XRE family plasmid maintenance system antidote protein; SMART: helix-turn-helix domain protein YP_004213182.1 PFAM: extracellular solute-binding protein family 5; KEGG: spe:Spro_2911 extracellular solute-binding protein YP_004213183.1 KEGG: spe:Spro_2912 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004213184.1 KEGG: spe:Spro_2913 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004213185.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2914 binding-protein-dependent transport systems inner membrane component YP_004213186.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2915 binding-protein-dependent transport systems inner membrane component YP_004213187.1 PFAM: extracellular solute-binding protein family 5; KEGG: spe:Spro_2916 4-phytase YP_004213188.1 PFAM: ChaC family protein; KEGG: spe:Spro_2918 ChaC family protein YP_004213189.1 PFAM: ChaB family protein; KEGG: ctu:Ctu_24170 cation transport regulator YP_004213190.1 KEGG: spe:Spro_2920 calcium/sodium:proton antiporter; TIGRFAM: calcium/proton exchanger; PFAM: sodium/calcium exchanger membrane region YP_004213191.1 PFAM: PhoH family protein; KEGG: ypb:YPTS_2005 hypothetical protein YP_004213192.1 KEGG: tet:TTHERM_00666900 hypothetical protein YP_004213193.1 KEGG: spe:Spro_3463 N-acetylmuramoyl-L-alanine amidase I; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin YP_004213194.1 KEGG: ebi:EbC_26230 heme-binding periplasmic protein involved in iron transport; TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase YP_004213195.1 PFAM: Peptidase M75, Imelysin; KEGG: spe:Spro_2928 hypothetical protein YP_004213196.1 PFAM: iron permease FTR1; KEGG: spe:Spro_2929 iron permease FTR1 YP_004213197.1 KEGG: spe:Spro_2930 sodium/proline symporter; TIGRFAM: sodium/proline symporter; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter YP_004213198.1 KEGG: spe:Spro_2931 trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Proline dehydrogenase; Aldehyde Dehydrogenase YP_004213199.1 KEGG: spe:Spro_2934 amino-acid ABC transporter ATP-binding protein YecC; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004213200.1 KEGG: ebi:EbC_26310 L-cystine ABC transporter permease protein; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004213201.1 KEGG: spe:Spro_2936 cystine transporter subunit; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_004213202.1 KEGG: ypz:YPZ3_1882 D-cysteine desulfhydrase; TIGRFAM: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; PFAM: Pyridoxal-5'-phosphate-dependent protein subunit beta YP_004213203.1 KEGG: spe:Spro_2938 flagella biosynthesis protein FliZ YP_004213204.1 KEGG: spe:Spro_2939 flagellar biosynthesis sigma factor; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein YP_004213205.1 PFAM: flagellin domain protein; KEGG: ebi:EbC_26380 flagellin YP_004213206.1 PFAM: flagellar hook-associated 2 domain-containing protein; flagellar hook-associated protein 2 domain-containing protein; flagellin hook IN repeat protein; KEGG: ebi:EbC_26390 flagellar hook-associated protein 2 YP_004213207.1 KEGG: spe:Spro_2942 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS YP_004213208.1 PFAM: flagellar export chaperone; KEGG: yen:YE2526 flagellar biosynthesis protein FliT YP_004213209.1 KEGG: spe:Spro_2944 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004213210.1 PFAM: Protein of unknown function DUF2566; KEGG: spe:Spro_2735 hypothetical protein YP_004213211.1 PFAM: protein of unknown function UPF0057; KEGG: ent:Ent638_3147 hypothetical protein YP_004213212.1 KEGG: fbc:FB2170_06295 hypothetical protein YP_004213213.1 KEGG: esa:ESA_01819 hypothetical protein YP_004213214.1 KEGG: rba:RB4784 arylsulfatase A precursor YP_004213215.1 KEGG: bcv:Bcav_1971 malto-oligosyltrehalose trehalohydrolase YP_004213218.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sgl:SG1900 acetyltransferase YP_004213219.1 KEGG: ebi:EbC_30240 conserved uncharacterized protein YP_004213220.1 manually curated; KEGG: eta:ETA_18610 hypothetical protein YP_004213221.1 manually curated YP_004213222.1 KEGG: yen:YE2536 flagellar hook-basal body protein FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE YP_004213223.1 KEGG: spe:Spro_2947 flagellar MS-ring protein; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein YP_004213224.1 KEGG: spe:Spro_2948 flagellar motor switch protein G; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG YP_004213225.1 PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: spe:Spro_2949 flagellar assembly protein H YP_004213226.1 TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; KEGG: spe:Spro_2950 flagellum-specific ATP synthase; SMART: AAA ATPase YP_004213227.1 KEGG: ypb:YPTS_1828 flagellar biosynthesis chaperone; TIGRFAM: flagellar export protein FliJ; PFAM: flagellar export FliJ family protein YP_004213228.1 PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: ebi:EbC_26610 flagellar hook-length control protein YP_004213229.1 PFAM: flagellar basal body-associated protein FliL; KEGG: spe:Spro_2953 flagellar basal body-associated protein FliL YP_004213230.1 KEGG: yen:YE2544 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein YP_004213231.1 KEGG: yen:YE2545 flagellar motor switch protein FliN; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein YP_004213232.1 TIGRFAM: flagellar biosynthetic protein FliO; KEGG: ypm:YP_1571 flagellar biosynthesis protein YP_004213233.1 KEGG: spe:Spro_2957 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein YP_004213234.1 KEGG: ebi:EbC_26670 flagellar biosynthesis protein; TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3 YP_004213235.1 manually curated; TIGRFAM: flagellar biosynthetic protein FliR; KEGG: yen:YE2549 flagellar biosynthesis protein FliR; PFAM: type III secretion system inner membrane R protein YP_004213236.1 KEGG: spe:Spro_1650 23S rRNA methyluridine methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumB; PFAM: (Uracil-5)-methyltransferase YP_004213237.1 PFAM: Protein of unknown function DUF2593; KEGG: spe:Spro_1649 hypothetical protein YP_004213238.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_1648 putrescine transporter subunit membrane component of ABC superfamily YP_004213239.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: efe:EFER_0999 putrescine transporter subunit: membrane component of ABC superfamily YP_004213240.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; KEGG: yen:YE1485 putrescine transporter ATP-binding subunit; SMART: AAA ATPase YP_004213241.1 PFAM: extracellular solute-binding protein family 1; KEGG: yen:YE1484 putrescine transporter subunit: periplasmic-binding component of ABC superfamily YP_004213242.1 PFAM: Sensory transduction regulator, KEGG: spe:Spro_1644 hypothetical protein YP_004213243.1 KEGG: spe:Spro_1643 alpha-L-glutamate ligase; TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp YP_004213244.1 PFAM: nitroreductase; KEGG: kpu:KP1_1845 nitroreductase A YP_004213245.1 KEGG: enc:ECL_02823 glutaredoxin 1; TIGRFAM: glutaredoxin, GrxA family; PFAM: glutaredoxin YP_004213246.1 KEGG: spe:Spro_1640 hypothetical protein YP_004213247.1 KEGG: ypb:YPTS_1454 hypothetical protein; TIGRFAM: YidE/YbjL duplication; PFAM: YidE/YbjL duplication domain-containing protein; TrkA-C domain protein YP_004213248.1 KEGG: ath:AT5G17970 disease resistance protein (TIR-NBS-LRR class) YP_004213249.1 KEGG: shl:Shal_1303 hypothetical protein YP_004213250.1 KEGG: spo:SPBC2G2.17c beta-glucosidase Psu2 (predicted) YP_004213251.1 KEGG: pmx:PERMA_0932 signal transduction response regulator YP_004213252.1 KEGG: ypb:YPTS_3565 hypothetical protein YP_004213253.1 KEGG: ypb:YPTS_3566 hypothetical protein YP_004213254.1 KEGG: ypb:YPTS_3567 phage gene YP_004213255.1 PFAM: tail assembly chaperone gp38; KEGG: plu:plu4369 hypothetical protein YP_004213256.1 KEGG: see:SNSL254_A2918 GP19 YP_004213257.1 KEGG: eum:ECUMN_0991 hypothetical protein YP_004213258.1 KEGG: sea:SeAg_B2785 phage protein YP_004213259.1 PFAM: Protein of unknown function DUF2590; KEGG: ypb:YPTS_3572 phage gene YP_004213260.1 KEGG: enc:ECL_02840 tail tape measure protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region YP_004213261.1 KEGG: seh:SeHA_C3479 phage protein YP_004213262.1 KEGG: ddd:Dda3937_02563 hypothetical protein YP_004213263.1 KEGG: ddc:Dd586_0752 hypothetical protein YP_004213264.1 PFAM: holin family 2; KEGG: ypb:YPTS_3577 holin family protein 2 YP_004213265.1 PFAM: Protein of unknown function DUF2597; KEGG: enc:ECL_02845 tail tube protein YP_004213266.1 PFAM: Protein of unknown function DUF2586; KEGG: ypb:YPTS_3579 phage gene YP_004213267.1 KEGG: ypb:YPTS_3580 phage gene YP_004213268.1 KEGG: sea:SeAg_B2795 hypothetical protein YP_004213269.1 PFAM: head completion protein; KEGG: eum:ECUMN_0979 head completion/stabilization protein (GpL) from bacteriophage origin YP_004213270.1 KEGG: seh:SeHA_C3489 hypothetical protein YP_004213271.1 PFAM: small terminase subunit; KEGG: ddc:Dd586_0745 small terminase subunit YP_004213272.1 KEGG: ddd:Dda3937_02572 hypothetical protein; TIGRFAM: phage major capsid protein, P2 family; PFAM: major capsid protein P2 YP_004213273.1 PFAM: capsid scaffolding; KEGG: ypy:YPK_0898 capsid scaffolding protein YP_004213274.1 KEGG: ddd:Dda3937_02574 hypothetical protein YP_004213275.1 KEGG: ypy:YPK_0896 PBSX family phage portal protein; TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein YP_004213276.1 PFAM: transcriptional activator Ogr/delta; KEGG: eum:ECUMN_0973 hypothetical protein YP_004213277.1 KEGG: enc:ECL_02856 hypothetical protein YP_004213278.1 PFAM: replication gene A; KEGG: dda:Dd703_3837 replication gene A YP_004213279.1 KEGG: sei:SPC_0877 hypothetical protein YP_004213280.1 KEGG: ypb:YPTS_3591 hypothetical protein YP_004213281.1 KEGG: ddd:Dda3937_01769 hypothetical protein YP_004213282.1 KEGG: ypb:YPTS_3593 hypothetical protein YP_004213283.1 KEGG: ypb:YPTS_3594 regulatory CII family protein YP_004213284.1 KEGG: sbo:SBO_0749 hypothetical protein YP_004213285.1 PFAM: CI repressor; KEGG: ddc:Dd586_0730 CI repressor YP_004213286.1 KEGG: ypb:YPTS_3597 hypothetical protein YP_004213287.1 KEGG: vvy:VV1784 hypothetical protein YP_004213288.1 PFAM: integrase family protein; KEGG: stt:t3400 bacteriophage integrase YP_004213290.1 KEGG: ses:SARI_00912 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796 YP_004213291.1 KEGG: bge:BC1002_4564 hypothetical protein YP_004213292.1 KEGG: pay:PAU_01439 hypothetical protein YP_004213293.1 KEGG: pwa:Pecwa_2865 hypothetical protein YP_004213294.1 KEGG: bmj:BMULJ_05376 glyoxalase/bleomycin resistance protein/dioxygenase YP_004213295.1 PFAM: porin Gram-negative type; KEGG: spe:Spro_3264 outer membrane porin protein C YP_004213296.1 KEGG: zma:100383431 hypothetical protein LOC100383431 YP_004213297.1 PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_1428 GCN5-related N-acetyltransferase YP_004213298.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: spe:Spro_1634 undecaprenyl pyrophosphate phosphatase; SMART: phosphoesterase PA-phosphatase related YP_004213299.1 KEGG: spe:Spro_1628 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein YP_004213300.1 PFAM: GlpM family protein; KEGG: ebi:EbC_15730 GlpM family protein YP_004213301.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; KEGG: eta:ETA_21870 hydrolase YP_004213302.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ddd:Dda3937_01926 LysR family regulatory protein YP_004213303.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: pam:PANA_3275 CndP1 YP_004213304.1 KEGG: dda:Dd703_2930 major facilitator superfamily MFS_1 YP_004213305.1 KEGG: yen:YE0966 hypothetical protein YP_004213306.1 KEGG: esa:ESA_00809 hypothetical protein YP_004213307.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: set:SEN3571 transporter YP_004213308.1 PFAM: glycoside hydrolase family 31; KEGG: esa:ESA_04154 alpha-xylosidase YicI YP_004213309.1 KEGG: spe:Spro_0102 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004213310.1 PFAM: inner-membrane translocator; KEGG: yen:YE4119 sugar transport system permease protein YP_004213311.1 TIGRFAM: D-xylose ABC transporter ATPase subunit; PFAM: ABC transporter related; KEGG: ebi:EbC_32960 D-xylose ABC transporter ATPase subunit; SMART: AAA ATPase YP_004213312.1 KEGG: ypb:YPTS_4107 D-xylose transporter subunit XylF; TIGRFAM: D-xylose ABC transporter periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator YP_004213313.1 TIGRFAM: xylose isomerase; KEGG: enc:ECL_00201 xylose isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel YP_004213314.1 KEGG: spe:Spro_0097 xylulokinase; TIGRFAM: xylulokinase; PFAM: Carbohydrate kinase, FGGY-like YP_004213315.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: spe:Spro_1383 autoinducer-2 (AI-2) modifying protein LsrG YP_004213316.1 PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: xbo:XBJ1_4104 aldolase with ribulose-phoshate binding barrel YP_004213317.1 KEGG: ypb:YPTS_0573 ABC transporter perplasmic sugar binding protein YP_004213318.1 PFAM: inner-membrane translocator; KEGG: ypi:YpsIP31758_3523 autoinducer AI-2 ABC transporter permease protein LsrD YP_004213319.1 PFAM: inner-membrane translocator; KEGG: ecr:ECIAI1_1526 AI2 transporter ; membrane component of ABC superfamily YP_004213320.1 KEGG: yen:YE0528 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004213321.1 PFAM: sugar-binding domain-containing protein; regulatory protein Crp; KEGG: yen:YE0529 transcriptional regulatory protein YP_004213322.1 PFAM: Carbohydrate kinase, FGGY-like; KEGG: spe:Spro_1382 autoinducer-2 (AI-2) kinase YP_004213323.1 KEGG: dze:Dd1591_1740 2-keto-3-deoxygluconate permease; TIGRFAM: 2-keto-3-deoxygluconate transporter; PFAM: 2-keto-3-deoxygluconate permease YP_004213324.1 TIGRFAM: transaldolase; KEGG: yen:YE1979 fructose-6-phosphate aldolase; PFAM: Transaldolase YP_004213325.1 TIGRFAM: glycyl-radical enzyme activating protein family; KEGG: yen:YE0645 pyruvate formate-lyase 3 activating enzyme; PFAM: Radical SAM domain protein YP_004213326.1 TIGRFAM: pyruvate formate-lyase; KEGG: ecl:EcolC_2821 pyruvate formate-lyase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical YP_004213327.1 KEGG: spe:Spro_2643 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004213328.1 KEGG: yen:YE1976 L-ribulose-5-phosphate 4-epimerase; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein YP_004213329.1 KEGG: enc:ECL_01750 osmotically inducible lipoprotein B YP_004213330.1 KEGG: efe:EFER_1672 translation initiation factor SUI1; TIGRFAM: translation initiation factor SUI1; PFAM: translation initiation factor SUI1 YP_004213331.1 TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: set:SEN1326 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase YP_004213332.1 KEGG: spe:Spro_2649 hypothetical protein YP_004213333.1 KEGG: yen:YE1968 tetratricopeptide repeat protein YP_004213334.1 KEGG: spe:Spro_2651 hypothetical protein YP_004213335.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: spe:Spro_2652 phosphatidylglycerophosphatase B; SMART: phosphoesterase PA-phosphatase related YP_004213336.1 TIGRFAM: GTP cyclohydrolase II; KEGG: spe:Spro_2653 GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II YP_004213337.1 KEGG: spe:Spro_2654 aconitate hydratase; TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain-containing protein YP_004213338.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2656 transcriptional regulator CysB YP_004213339.1 SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; TIGRFAM: DNA topoisomerase I; KEGG: spe:Spro_2657 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; DNA topoisomerase type IA zn finger domain protein; DNA topoisomerase I zinc ribbon domain protein YP_004213340.1 PFAM: Protein of unknown function DUF2498; KEGG: sgl:SG1407 hypothetical protein YP_004213341.1 PFAM: Peptidase S49 domain protein; peptidase S49; KEGG: spe:Spro_2659 periplasmic protease YP_004213342.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ypm:YP_2012 short chain dehydrogenase YP_004213343.1 TIGRFAM: cob(I)alamin adenosyltransferase; KEGG: spe:Spro_2661 cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YP_004213344.1 TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; KEGG: etr:ETAE_1847 nicotinate-nucleotide--dimethylbenzimidazole; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_004213345.1 KEGG: plu:plu2981 alpha-ribazole-5'-phosphate phosphatase; TIGRFAM: alpha-ribazole phosphatase; PFAM: Phosphoglycerate mutase YP_004213346.1 KEGG: etr:ETAE_1546 cobalamin synthase; TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS YP_004213347.1 KEGG: yen:YE2710 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; PFAM: cobalbumin biosynthesis protein YP_004213348.1 KEGG: spe:Spro_2662 23S rRNA pseudouridylate synthase B; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_004213349.1 KEGG: ypb:YPTS_2203 hypothetical protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain YP_004213350.1 KEGG: spe:Spro_2666 phosphotransferase domain-containing protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein YP_004213351.1 KEGG: yen:YE2209 anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein YP_004213352.1 KEGG: yen:YE2210 anthranilate synthase component II; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I YP_004213353.1 TIGRFAM: anthranilate phosphoribosyltransferase; KEGG: spe:Spro_2669 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like YP_004213354.1 KEGG: spe:Spro_2670 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; PFAM: Indole-3-glycerol phosphate synthase; N-(5'phosphoribosyl)anthranilate isomerase (PRAI) YP_004213355.1 KEGG: spe:Spro_2671 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase, subunit beta; PFAM: Pyridoxal-5'-phosphate-dependent protein subunit beta YP_004213356.1 KEGG: spe:Spro_2672 tryptophan synthase subunit alpha; TIGRFAM: tryptophan synthase, subunit alpha; PFAM: tryptophan synthase alpha chain YP_004213357.1 KEGG: spe:Spro_2673 transport-associated; PFAM: transport-associated; SMART: Transport-associated and nodulation region YP_004213358.1 PFAM: OmpW family protein; KEGG: ddd:Dda3937_00570 outer membrane protein W YP_004213359.1 PFAM: protein of unknown function UPF0153; KEGG: yen:YE2216A hypothetical protein YP_004213360.1 PFAM: protein of unknown function UPF0259; KEGG: spe:Spro_2675 hypothetical protein YP_004213361.1 PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein YP_004213362.1 KEGG: spe:Spro_2677 intracellular septation protein A; TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A YP_004213363.1 PFAM: thioesterase superfamily protein; KEGG: spe:Spro_2678 acyl-CoA thioester hydrolase YP_004213364.1 KEGG: spe:Spro_2682 transport protein TonB; TIGRFAM: TonB family protein; PFAM: TonB domain YP_004213365.1 PFAM: YCII-related; KEGG: ecw:EcE24377A_1399 YciI-like protein YP_004213366.1 KEGG: gem:GM21_2278 hypothetical protein YP_004213367.1 KEGG: ypb:YPTS_2464 hypothetical protein YP_004213368.1 KEGG: yen:YE2227 cardiolipin synthetase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase YP_004213369.1 PFAM: protein of unknown function DUF440; KEGG: spe:Spro_2690 dsDNA-mimic protein YP_004213370.1 TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: yen:YE2229 oligopeptide transport ATP-binding protein; SMART: AAA ATPase YP_004213371.1 TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: spe:Spro_2698 oligopeptide transporter ATP-binding component; SMART: AAA ATPase YP_004213372.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kva:Kvar_1987 binding-protein-dependent transport systems inner membrane component YP_004213373.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypb:YPTS_2174 oligopeptide transporter permease YP_004213374.1 PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE2233 periplasmic oligopeptide-binding protein precursor YP_004213375.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: etr:ETAE_1511 multiple antibiotic transporter YP_004213376.1 PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: yen:YE2238 bifunctional acetaldehyde-CoA/alcohol dehydrogenase YP_004213377.1 KEGG: pwa:Pecwa_2283 thymidine kinase; PFAM: thymidine kinase YP_004213378.1 KEGG: spe:Spro_2706 global DNA-binding transcriptional dual regulator H-NS; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS YP_004213379.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: ebi:EbC_24040 UDP-sugar epimerase YP_004213380.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: spe:Spro_2708 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_004213381.1 KEGG: spe:Spro_2710 response regulator of RpoS; PFAM: response regulator receiver; SMART: response regulator receiver YP_004213382.1 PFAM: Patatin; KEGG: spe:Spro_2711 hypothetical protein YP_004213383.1 PFAM: SEC-C motif domain protein; KEGG: ypb:YPTS_2164 hypothetical protein YP_004213384.1 KEGG: spe:Spro_2713 formyltetrahydrofolate deformylase; TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein YP_004213385.1 KEGG: atu:Atu4723 ABC transporter nucleotide binding/ATPase protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004213386.1 PFAM: Microcystin LR degradation protein MlrC-like; MlrC domain protein; KEGG: rlg:Rleg_4101 microcystin LR degradation protein MlrC-like protein YP_004213387.1 PFAM: ROK family protein; KEGG: ara:Arad_8668 transcriptional regulator protein YP_004213388.1 PFAM: extracellular solute-binding protein family 5; KEGG: rfr:Rfer_3103 extracellular solute-binding protein YP_004213389.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: enc:ECL_02888 peptide/nickel transport system permease protein YP_004213390.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH0030 oligopeptide ABC transporter (permease) YP_004213391.1 PFAM: ROK family protein; KEGG: oan:Oant_3487 ROK family protein YP_004213392.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dac:Daci_2652 GCN5-related N-acetyltransferase YP_004213393.1 KEGG: kva:Kvar_2401 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase YP_004213394.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2097 major facilitator transporter YP_004213395.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; Extradiol ring-cleavage dioxygenase LigAB LigA subunit; KEGG: spe:Spro_2096 protocatechuate 4,5-dioxygenase YP_004213396.1 PFAM: amidohydrolase 2; KEGG: eay:EAM_1903 amidohydrolase YP_004213397.1 TIGRFAM: 3-dehydroquinate dehydratase, type II; KEGG: spe:Spro_2094 3-dehydroquinate dehydratase, type II; PFAM: dehydroquinase class II YP_004213398.1 KEGG: ebi:EbC_pEb10200130 lipid A core, surface polymer ligase WaaL YP_004213399.1 PFAM: glycosyl transferase group 1; KEGG: ecg:E2348C_3876 UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransfe rase YP_004213400.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2093 LysR family transcriptional regulator YP_004213401.1 PFAM: LmbE family protein; KEGG: spe:Spro_2092 LmbE family protein YP_004213402.1 KEGG: spe:Spro_2091 hypothetical protein; TIGRFAM: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; PFAM: Dimethylmenaquinone methyltransferase YP_004213403.1 PFAM: protein of unknown function DUF453; KEGG: kpu:KP1_5416 hypothetical protein YP_004213404.1 PFAM: Phosphogluconate dehydrogenase, NAD-binding, -like; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: ebi:EbC_05330 phosphogluconate dehydrogenase, NAD-binding YP_004213405.1 TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: spe:Spro_2351 oligopeptide/dipeptide ABC transporter ATPase subunit; SMART: AAA ATPase YP_004213406.1 TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: spe:Spro_2350 oligopeptide/dipeptide ABC transporter ATPase subunit; SMART: AAA ATPase YP_004213407.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2349 ATP-dependent peptide transporter membrane subunit YP_004213408.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2348 binding-protein-dependent transport systems inner membrane component YP_004213409.1 PFAM: extracellular solute-binding protein family 5; KEGG: spe:Spro_2347 extracellular solute-binding protein YP_004213410.1 PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; KEGG: spe:Spro_2346 D-alanyl-D-alanine dipeptidase YP_004213411.1 KEGG: spe:Spro_2345 RpiR family transcriptional regulator YP_004213412.1 KEGG: spe:Spro_2521 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_004213413.1 KEGG: esa:ESA_02710 hypothetical protein; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_004213414.1 KEGG: spe:Spro_2522 ABC transporter-related protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004213415.1 PFAM: glycoside hydrolase family 4; KEGG: spe:Spro_2523 glycoside hydrolase family protein YP_004213416.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2524 binding-protein-dependent transport systems inner membrane component YP_004213417.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2525 binding-protein-dependent transport systems inner membrane component YP_004213418.1 PFAM: extracellular solute-binding protein family 1; KEGG: spe:Spro_2526 extracellular solute-binding protein YP_004213419.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2527 LysR family transcriptional regulator YP_004213420.1 KEGG: car:cauri_2289 PTS system, glucose-specific IIABC component YP_004213421.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: esa:ESA_03964 hypothetical protein YP_004213422.1 PFAM: major facilitator superfamily MFS_1; KEGG: esa:ESA_03965 hypothetical protein YP_004213423.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pwa:Pecwa_0025 galactonate dehydratase YP_004213424.1 PFAM: KDPG and KHG aldolase; KEGG: spe:Spro_0043 2-dehydro-3-deoxy-6-phosphogalactonate aldolase YP_004213425.1 KEGG: pwa:Pecwa_0023 2-dehydro-3-deoxygalactonokinase; PFAM: 2-keto-3-deoxy-galactonokinase YP_004213426.1 KEGG: pwa:Pecwa_0022 GntR domain protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004213427.1 PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_3499 GCN5-related N-acetyltransferase YP_004213428.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ent:Ent638_1530 transposase IS116/IS110/IS902 family protein YP_004213429.1 KEGG: enc:ECL_03132 hypothetical protein YP_004213430.1 PFAM: lysine exporter protein (LYSE/YGGA); KEGG: ddd:Dda3937_01179 threonine efflux protein YP_004213431.1 KEGG: ebi:EbC_44350 conserved uncharacterized protein YP_004213432.1 KEGG: kpu:KP1_2833 hypothetical protein YP_004213433.1 KEGG: ecz:ECS88_2192 conserved hypothetical protein from phage origin; membrane protein YP_004213434.1 KEGG: epy:EpC_04550 conserved uncharacterized protein YP_004213435.1 KEGG: stt:t0349 hypothetical protein YP_004213436.1 KEGG: dac:Daci_4287 N-acetyltransferase; PFAM: N-acetyltransferase YP_004213437.1 manually curated; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: dac:Daci_4286 transcriptional regulator; SMART: regulatory protein GntR HTH YP_004213438.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ebi:EbC_37500 hypothetical protein YP_004213439.1 KEGG: ebi:EbC_37490 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004213440.1 KEGG: ebi:EbC_37480 allophanate hydrolase subunit 1; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1 YP_004213441.1 SMART: Allophanate hydrolase subunit 2; TIGRFAM: urea amidolyase related protein; KEGG: ebi:EbC_37470 allophanate hydrolase subunit 2; PFAM: Allophanate hydrolase subunit 2 YP_004213442.1 PFAM: aminotransferase class I and II; KEGG: ebi:EbC_37460 aspartate aminotransferase A YP_004213443.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebi:EbC_37450 transcriptional regulator, LysR family YP_004213444.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: ebi:EbC_37440 hypothetical protein YP_004213445.1 PFAM: LamB/YcsF family protein; KEGG: ebi:EbC_37430 LamB/YcsF family protein YP_004213446.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebi:EbC_37420 short-chain dehydrogenase YP_004213447.1 KEGG: ebi:EbC_37410 polar amino acid ABC transporter permease protein; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004213448.1 KEGG: ebi:EbC_37400 polar amino acid ABC transporter permease protein; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004213449.1 KEGG: ebi:EbC_37390 polar amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004213450.1 KEGG: eca:ECA1595 hypothetical protein YP_004213452.1 KEGG: pst:PSPTO_3020 hypothetical protein YP_004213453.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pfs:PFLU3381 LysR-family transcriptional regulator YP_004213454.1 PFAM: FAD dependent oxidoreductase; KEGG: pct:PC1_4199 FAD dependent oxidoreductase YP_004213455.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rlt:Rleg2_6509 binding-protein-dependent transport systems inner membrane component YP_004213456.1 KEGG: ara:Arad_3603 amino acid ABC transporter; PFAM: ABC transporter related; NIL domain; SMART: AAA ATPase YP_004213457.1 KEGG: mlo:mll4794 outer membrane lipoprotein; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein YP_004213458.1 KEGG: spe:Spro_3126 phosphoglycerol transferase I; PFAM: sulfatase YP_004213459.1 KEGG: ent:Ent638_2495 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004213460.1 KEGG: ent:Ent638_2494 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004213461.1 PFAM: inner-membrane translocator; KEGG: ent:Ent638_2493 inner-membrane translocator YP_004213462.1 PFAM: inner-membrane translocator; KEGG: ent:Ent638_2492 inner-membrane translocator YP_004213463.1 PFAM: Extracellular ligand-binding receptor; KEGG: enc:ECL_01382 branched-chain amino acid transport system substrate-binding protein YP_004213464.1 PFAM: protein of unknown function DUF903; KEGG: set:SEN1470 lipoprotein YP_004213465.1 KEGG: ebi:EbC_44400 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004213466.1 KEGG: ppg:PputGB1_2870 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase YP_004213467.1 KEGG: ypb:YPTS_0093 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; peptidase C39 bacteriocin processing; SMART: AAA ATPase YP_004213468.1 PFAM: secretion protein HlyD family protein; KEGG: ypb:YPTS_0094 secretion protein HlyD family protein YP_004213469.1 KEGG: sbl:Sbal_2364 methyl-accepting chemotaxis sensory transducer YP_004213470.1 KEGG: esa:ESA_01215 hypothetical protein; TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; PFAM: Protein of unknown function DUF2345 YP_004213471.1 PFAM: VRR-NUC domain-containing protein; KEGG: ses:SARI_00051 hypothetical protein YP_004213472.1 KEGG: ses:SARI_00052 hypothetical protein YP_004213473.1 KEGG: ent:Ent638_2907 hypothetical protein YP_004213474.1 PFAM: Uncharacterised protein family UPF0283; KEGG: spe:Spro_2618 hypothetical protein YP_004213475.1 PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: spe:Spro_2619 hypothetical protein YP_004213476.1 PFAM: shock protein PspD; KEGG: spe:Spro_2621 peripheral inner membrane phage-shock protein YP_004213477.1 KEGG: yen:YE2119 DNA-binding transcriptional activator PspC; TIGRFAM: phage shock protein C; PFAM: PspC domain protein YP_004213478.1 KEGG: yen:YE2120 phage shock protein B; TIGRFAM: phage shock protein B; PFAM: shock B family protein YP_004213479.1 KEGG: spe:Spro_2624 phage shock protein PspA; TIGRFAM: phage shock protein A; PFAM: PspA/IM30 family protein YP_004213480.1 TIGRFAM: psp operon transcriptional activator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; KEGG: spe:Spro_2625 phage shock protein operon transcriptional activator; SMART: AAA ATPase YP_004213481.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: spe:Spro_2626 cobalamin synthesis protein P47K YP_004213482.1 PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE2125 peptide transport periplasmic protein precursor YP_004213483.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE2126 peptide transport system permease protein YP_004213484.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2631 binding-protein-dependent transport systems inner membrane component YP_004213485.1 TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: spe:Spro_2632 oligopeptide/dipeptide ABC transporter ATPase subunit; SMART: AAA ATPase YP_004213486.1 KEGG: spe:Spro_2633 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004213487.1 KEGG: spe:Spro_2634 uncharacterized peroxidase-related enzyme; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase YP_004213488.1 KEGG: spe:Spro_2233 tripeptide transporter permease; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region YP_004213489.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: etr:ETAE_1299 hypothetical protein YP_004213490.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; KEGG: spe:Spro_2420 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAC repeat-containing protein; GAF domain protein; PAS domain containing protein YP_004213491.1 KEGG: vap:Vapar_6347 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004213492.1 KEGG: spe:Spro_1004 hypothetical protein YP_004213493.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: ebi:EbC_26110 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_004213494.1 KEGG: spe:Spro_2222 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_004213495.1 PFAM: Glutathione S-transferase domain; KEGG: spe:Spro_2221 glutathionine S-transferase YP_004213496.1 TIGRFAM: pyridoxal kinase; KEGG: spe:Spro_2220 pyridoxamine kinase; PFAM: PfkB domain protein YP_004213497.1 SMART: RNA-binding S4 domain protein; TIGRFAM: tyrosyl-tRNA synthetase; KEGG: spe:Spro_2219 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein YP_004213498.1 TIGRFAM: pyridoxamine 5'-phosphate oxidase; KEGG: spe:Spro_2218 pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; Pyridoxine 5'-phosphate oxidase, dimerisation-like YP_004213499.1 PFAM: Protein of unknown function DUF2091, periplasmic; KEGG: pwa:Pecwa_2663 hypothetical protein YP_004213500.1 PFAM: protein of unknown function UPF0075; KEGG: spe:Spro_2216 anhydro-N-acetylmuramic acid kinase YP_004213501.1 KEGG: eay:EAM_1678 outer membrane lipoprotein YP_004213502.1 KEGG: ent:Ent638_1805 transcriptional regulator SlyA; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004213503.1 PFAM: protein of unknown function DUF1656; KEGG: spe:Spro_2213 hypothetical protein YP_004213504.1 PFAM: secretion protein HlyD family protein; KEGG: spe:Spro_2212 secretion protein HlyD family protein YP_004213505.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: spe:Spro_2211 fusaric acid resistance protein region YP_004213506.1 PFAM: aldo/keto reductase; KEGG: yen:YE2148 aldo/keto reductase YP_004213507.1 PFAM: protein of unknown function DUF1289; KEGG: spe:Spro_2207 hypothetical protein YP_004213508.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: spe:Spro_2202 N-ethylmaleimide reductase YP_004213509.1 TIGRFAM: lactoylglutathione lyase; KEGG: spe:Spro_2200 lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_004213510.1 TIGRFAM: ribonuclease T; PFAM: Exonuclease RNase T and DNA polymerase III; KEGG: spe:Spro_2199 ribonuclease T; SMART: Exonuclease YP_004213511.1 KEGG: pwa:Pecwa_2670 hypothetical protein; TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin YP_004213512.1 PFAM: NLP/P60 protein; KEGG: yen:YE2156 hypothetical protein YP_004213514.1 KEGG: ypb:YPTS_2374 DNA-binding transcriptional repressor PurR; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004213515.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2194 DNA-binding transcriptional regulator YP_004213516.1 KEGG: spe:Spro_2193 inner membrane transport protein YdhC; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004213517.1 KEGG: spe:Spro_2192 cyclopropane fatty acyl phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase YP_004213518.1 TIGRFAM: riboflavin synthase, subunit alpha; KEGG: spe:Spro_2190 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein YP_004213519.1 KEGG: yen:YE2163 multidrug efflux protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_004213520.1 TIGRFAM: pyruvate kinase; KEGG: spe:Spro_2187 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta YP_004213521.1 PFAM: hypothetical protein; KEGG: spe:Spro_2186 hypothetical protein YP_004213523.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding lysin domain; KEGG: yen:YE2166 hypothetical protein YP_004213524.1 PFAM: Fe-S metabolism associated SufE; KEGG: yen:YE2167 cysteine desufuration protein SufE YP_004213525.1 KEGG: spe:Spro_2183 SufS subfamily cysteine desulfurase; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V YP_004213526.1 KEGG: spe:Spro_2182 FeS assembly protein SufD; TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein YP_004213527.1 TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: spe:Spro_2181 cysteine desulfurase ATPase; SMART: AAA ATPase YP_004213528.1 KEGG: spe:Spro_2180 cysteine desulfurase activator complex subunit SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein YP_004213529.1 KEGG: yen:YE2172 iron-sulfur cluster assembly scaffold protein; TIGRFAM: FeS assembly scaffold SufA; iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein YP_004213530.1 KEGG: spe:Spro_2178 hypothetical protein YP_004213531.1 PFAM: thioesterase superfamily protein; KEGG: spe:Spro_2177 thioesterase superfamily protein YP_004213532.1 PFAM: FAD linked oxidase domain protein; KEGG: spe:Spro_2176 FAD linked oxidase domain-containing protein YP_004213533.1 KEGG: dan:Dana_GF12714 GF12714 gene product from transcript GF12714-RA YP_004213534.1 PFAM: protein of unknown function UPF0118; KEGG: spe:Spro_2175 hypothetical protein YP_004213535.1 KEGG: pct:PC1_2456 phosphoenolpyruvate synthase; TIGRFAM: phosphoenolpyruvate synthase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein YP_004213536.1 PFAM: protein of unknown function DUF299; KEGG: spe:Spro_2173 hypothetical protein YP_004213537.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: ent:Ent638_1743 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_004213538.1 PFAM: Haemin-degrading family protein; KEGG: ypb:YPTS_0363 hemin-degrading family protein YP_004213539.1 PFAM: periplasmic binding protein; KEGG: spe:Spro_2167 periplasmic binding protein YP_004213540.1 PFAM: transport system permease protein; KEGG: yen:YE0328 hemin transport system permease protein HmuU YP_004213541.1 KEGG: spe:Spro_2165 hemin importer ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_004213542.1 PFAM: protein of unknown function UPF0061; KEGG: spe:Spro_2164 hypothetical protein YP_004213543.1 PFAM: EAL domain protein; KEGG: spe:Spro_2163 diguanylate phosphodiesterase YP_004213545.1 KEGG: spe:Spro_2162 lipoate-protein ligase A; TIGRFAM: lipoyltransferase and lipoate-protein ligase; PFAM: biotin/lipoate A/B protein ligase; Lipoate protein ligase-like YP_004213546.1 PFAM: NLP/P60 protein; KEGG: etr:ETAE_1805 lipoprotein YP_004213547.1 KEGG: yen:YE2186 hypothetical protein YP_004213548.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: spe:Spro_2159 hypothetical protein YP_004213549.1 PFAM: glycosyl transferase family 39; KEGG: yen:YE2188 4-amino-4-deoxy-L-arabinose transferase YP_004213550.1 PFAM: polysaccharide deacetylase; KEGG: pmr:PMI1046 polysaccharide deacetylase YP_004213551.1 PFAM: NAD-dependent epimerase/dehydratase; formyl transferase domain protein; KEGG: spe:Spro_2156 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase YP_004213552.1 PFAM: glycosyl transferase family 2; KEGG: spe:Spro_2155 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase YP_004213553.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: spe:Spro_2154 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase YP_004213555.1 KEGG: ypm:YP_2210 vitamin B12-transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase YP_004213556.1 KEGG: esa:ESA_02112 glutathione peroxidase; PFAM: glutathione peroxidase YP_004213557.1 PFAM: transport system permease protein; KEGG: spe:Spro_2151 vtamin B12-transporter permease YP_004213558.1 PFAM: Protein of unknown function DUF2502; KEGG: yen:YE2196 hypothetical protein YP_004213559.1 KEGG: pct:PC1_0085 hypothetical protein YP_004213560.1 TIGRFAM: integration host factor, subunit alpha; PFAM: histone family protein DNA-binding protein; KEGG: etr:ETAE_1809 integration host factor, subunit alpha; SMART: histone family protein DNA-binding protein YP_004213561.1 KEGG: spe:Spro_2149 phenylalanyl-tRNA synthetase subunit beta; TIGRFAM: phenylalanyl-tRNA synthetase, subunit beta YP_004213562.1 KEGG: ctu:Ctu_18490 phenylalanyl-tRNA synthetase subunit alpha; TIGRFAM: phenylalanyl-tRNA synthetase, subunit alpha; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein YP_004213563.1 KEGG: yen:YE1915 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20 YP_004213564.1 KEGG: ypb:YPTS_2414 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35 YP_004213565.1 manually curated; TIGRFAM: translation initiation factor IF-3; KEGG: ypi:YpsIP31758_1713 translation initiation factor IF-3; PFAM: Translation initiation factor 3-like YP_004213566.1 KEGG: ddd:Dda3937_03683 threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain-containing protein; Anticodon-binding domain protein YP_004213567.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: spe:Spro_2141 multiple drug resistance protein MarC YP_004213568.1 PFAM: lytic transglycosylase catalytic; KEGG: spe:Spro_2135 lytic transglycosylase catalytic YP_004213569.1 PFAM: Fructosamine/Ketosamine-3-kinase; KEGG: ypb:YPTS_2425 fructosamine kinase YP_004213570.1 KEGG: yen:YE1891 yfeABCD locus regulator YP_004213571.1 KEGG: ebi:EbC_18740 phosphatase YniC; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004213572.1 KEGG: ypb:YPTS_2430 5-keto-4-deoxyuronate isomerase; PFAM: KduI/IolB isomerase YP_004213573.1 KEGG: pct:PC1_1909 2-deoxy-D-gluconate 3-dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR YP_004213574.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: pct:PC1_1901 hypothetical protein YP_004213575.1 PFAM: sodium:dicarboxylate symporter; KEGG: spe:Spro_2123 sodium:dicarboxylate symporter YP_004213576.1 KEGG: pct:PC1_1885 transcriptional regulator, IclR family; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_004213577.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2121 major facilitator transporter YP_004213578.1 PFAM: peptidase M48 Ste24p; KEGG: eca:ECA2427 heat shock protein HtpX YP_004213579.1 SMART: peptidase S41; PDZ/DHR/GLGF domain protein; TIGRFAM: carboxyl-terminal protease; KEGG: spe:Spro_2119 carboxy-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein YP_004213580.1 PFAM: Fertility inhibition FinO-like; KEGG: ypb:YPTS_2452 solute/DNA competence effector YP_004213581.1 SMART: GAF domain protein; KEGG: yen:YE1866 hypothetical protein YP_004213582.1 KEGG: spe:Spro_2116 PqiA family integral membrane protein; TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A YP_004213583.1 PFAM: Mammalian cell entry related domain protein; KEGG: yen:YE1864 hypothetical protein YP_004213584.1 KEGG: spe:Spro_2113 rRNA (cytosine-C(5)-)-methyltransferase RsmF; TIGRFAM: RNA methylase, NOL1/NOP2/sun family; PFAM: Fmu (Sun) domain protein YP_004213585.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; KEGG: yen:YE1855 hypothetical protein; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein YP_004213586.1 PFAM: protein of unknown function DUF1480; KEGG: spe:Spro_2106 hypothetical protein YP_004213587.1 KEGG: spe:Spro_2105 hypothetical protein YP_004213588.1 PFAM: protein of unknown function DUF437; KEGG: ypb:YPTS_2463 hypothetical protein YP_004213589.1 KEGG: cyn:Cyan7425_3973 KWG repeat protein YP_004213590.1 KEGG: cts:Ctha_0023 KWG repeat protein YP_004213591.1 manually curated; KEGG: kva:Kvar_1956 hypothetical protein YP_004213592.1 TIGRFAM: amidohydrolase; KEGG: rsl:RPSI07_mp0230 amidohydrolase; hippurate hydrolase protein (similar to HipO); PFAM: peptidase M20; peptidase dimerisation domain protein YP_004213593.1 PFAM: Extensin family protein; KEGG: eca:ECA2466 hypothetical protein YP_004213594.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: eay:EAM_1064 alcohol dehydrogenase, propanol-preferring YP_004213595.1 KEGG: ddd:Dda3937_02184 aspartate chemoreceptor protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer YP_004213596.1 KEGG: enc:ECL_A245 cation efflux protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_004213597.1 KEGG: enc:ECL_A246 hypothetical protein YP_004213598.1 PFAM: AAA-4 family protein; KEGG: slo:Shew_1142 transcriptional regulator YP_004213599.1 KEGG: epy:EpC_07540 transposase subunit; manually curated; PFAM: Integrase catalytic region YP_004213600.1 PFAM: transposase IS3/IS911 family protein; KEGG: ent:Ent638_4321 transposase IS3/IS911 family protein YP_004213601.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bph:Bphy_4755 GCN5-related N-acetyltransferase YP_004213602.1 KEGG: pam:PANA_3394 hypothetical protein YP_004213603.1 PFAM: Protein of unknown function DUF2511; KEGG: dze:Dd1591_2234 hypothetical protein YP_004213604.1 KEGG: spe:Spro_1944 copper resistance D domain-containing protein YP_004213605.1 PFAM: copper resistance protein CopC; KEGG: ypb:YPTS_1785 copper resistance protein CopC YP_004213606.1 KEGG: dze:Dd1591_2236 ferroxidase; PFAM: Ferritin Dps family protein YP_004213607.1 PFAM: DNA polymerase II subunit beta; KEGG: spe:Spro_1941 DNA polymerase III subunit theta YP_004213608.1 KEGG: spe:Spro_1940 proline iminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold YP_004213609.1 KEGG: ypb:YPTS_1781 hypothetical protein YP_004213610.1 KEGG: spe:Spro_1937 oligopeptidase B; PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller YP_004213611.1 KEGG: spe:Spro_2801 hypothetical protein YP_004213612.1 KEGG: ypy:YPK_2446 ATP-dependent RNA helicase DbpA; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004213613.1 TIGRFAM: phosphoribosylglycinamide formyltransferase 2; KEGG: spe:Spro_2805 phosphoribosylglycinamide formyltransferase 2; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_004213614.1 PFAM: protein of unknown function UPF0181; KEGG: spe:Spro_2806 hypothetical protein YP_004213615.1 KEGG: dze:Dd1591_1987 para-aminobenzoate synthase, subunit I; TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein YP_004213616.1 PFAM: NUDIX hydrolase; KEGG: yen:YE1780 hypothetical protein YP_004213617.1 TIGRFAM: L-serine dehydratase 1; KEGG: spe:Spro_2810 L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain YP_004213618.1 KEGG: spe:Spro_2811 EAL domain-containing protein; PFAM: EAL domain protein; SMART: EAL domain protein YP_004213619.1 PFAM: Integral membrane protein TerC; CBS domain containing protein; transporter-associated region; KEGG: ypb:YPTS_1759 integral membrane protein TerC YP_004213620.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB subunit; PTS system, mannose/fructose/sorbose family, IIA subunit; KEGG: spe:Spro_2813 PTS system mannose/fructose/sorbose family transporter subunit IIB; PFAM: PTS system sorbose subfamily IIB component; PTS system fructose subfamily IIA component YP_004213621.1 KEGG: pam:PANA_2146 ManY; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIC subunit; PFAM: phosphotransferase system PTS sorbose-specific IIC subunit YP_004213622.1 KEGG: spe:Spro_2815 PTS system mannose-specific transporter subunit IID; TIGRFAM: PTS system, mannose/fructose/sorbose family, IID subunit; PFAM: PTS system mannose/fructose/sorbose family IID component YP_004213623.1 PFAM: protein of unknown function DUF986; KEGG: yen:YE1773 hypothetical protein YP_004213624.1 PFAM: protein of unknown function DUF204; KEGG: spe:Spro_2817 hypothetical protein YP_004213625.1 KEGG: ypb:YPTS_1749 23S rRNA methyltransferase A; PFAM: methyltransferase type 11 YP_004213626.1 PFAM: protein of unknown function DUF152; KEGG: spe:Spro_2821 hypothetical protein YP_004213627.1 KEGG: spe:Spro_2822 cold shock-like protein CspC; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_004213628.1 KEGG: spe:Spro_2823 beta-lactamase domain-containing protein YP_004213629.1 KEGG: spe:Spro_2824 hypothetical protein YP_004213630.1 KEGG: yen:YE1760 hypothetical protein YP_004213631.1 KEGG: ypb:YPTS_1741 hypothetical protein YP_004213632.1 KEGG: spe:Spro_2828 hypothetical protein YP_004213633.1 KEGG: esa:ESA_02934 hypothetical protein; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein YP_004213634.1 KEGG: spe:Spro_2830 hypothetical protein YP_004213635.1 KEGG: ypb:YPTS_1738 hypothetical protein YP_004213636.1 PFAM: protein of unknown function DUF1482; KEGG: ctu:Ctu_25200 uncharacterized protein YebW YP_004213637.1 PFAM: extracellular solute-binding protein family 5; KEGG: enc:ECL_02675 extracellular solute-binding protein YP_004213638.1 KEGG: spe:Spro_2101 hypothetical protein YP_004213639.1 KEGG: spe:Spro_1864 hypothetical protein YP_004213640.1 KEGG: kva:Kvar_2271 hypothetical protein YP_004213641.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; KEGG: spe:Spro_2025 isocitrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_004213642.1 PFAM: pseudouridine synthase; KEGG: yen:YE1724 pseudouridine synthase YP_004213643.1 PFAM: NUDIX hydrolase; KEGG: eum:ECUMN_1378 bifunctional thiamin pyrimidine pyrophosphate hydrolase and thiamin pyrophosphate hydrolase YP_004213644.1 TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: ctu:Ctu_17100 tRNA-specific 2-thiouridylase MnmA YP_004213645.1 PFAM: protein of unknown function DUF489; KEGG: ypk:y1798 hypothetical protein YP_004213646.1 KEGG: ypb:YPTS_2515 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase domain-containing protein YP_004213647.1 PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein YP_004213648.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ddd:Dda3937_04456 transposase YP_004213649.1 KEGG: spe:Spro_2013 DNA-binding transcriptional regulator PhoP; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004213650.1 KEGG: spe:Spro_2012 sensor protein PhoQ; PFAM: PhoQ Sensor domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004213651.1 SMART: transcription factor jumonji jmjC domain-containing protein; KEGG: spe:Spro_2011 cupin 4 family protein YP_004213652.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ppr:PBPRB1640 hypothetical protein YP_004213653.1 KEGG: cro:ROD_40891 hypothetical protein YP_004213654.1 TIGRFAM: peptidase T; KEGG: ypy:YPK_1712 peptidase T; PFAM: peptidase dimerisation domain protein; peptidase M20 YP_004213655.1 PFAM: Silent information regulator protein Sir2; KEGG: spe:Spro_2005 NAD-dependent deacetylase YP_004213656.1 KEGG: spe:Spro_2003 outer membrane-specific lipoprotein transporter subunit LolE; TIGRFAM: lipoprotein releasing system, transmembrane protein LolE; lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214 YP_004213657.1 TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; KEGG: spe:Spro_2002 lipoprotein transporter ATP-binding subunit; SMART: AAA ATPase YP_004213658.1 manually curated; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; KEGG: sdy:SDY_2034 outer membrane-specific lipoprotein transporter subunit LolC; PFAM: protein of unknown function DUF214 YP_004213659.1 TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; DEAD/DEAH box helicase domain protein; helicase domain protein; TRCF domain protein; KEGG: spe:Spro_1998 transcription-repair coupling factor; SMART: DEAD-like helicase ; helicase domain protein YP_004213660.1 KEGG: pwa:Pecwa_2791 hypothetical protein YP_004213661.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ypb:YPTS_2531 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004213662.1 PFAM: protein of unknown function UPF0227; KEGG: spe:Spro_1925 hypothetical protein YP_004213663.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: spe:Spro_1924 beta-hexosaminidase YP_004213664.1 KEGG: spe:Spro_1923 thiamine kinase; PFAM: aminoglycoside phosphotransferase YP_004213665.1 TIGRFAM: membrane lipoprotein lipid attachment site; KEGG: spe:Spro_1922 membrane lipoprotein lipid attachment site YP_004213666.1 PFAM: protein of unknown function DUF1425; KEGG: spe:Spro_1921 hypothetical protein YP_004213667.1 PFAM: histidine triad (HIT) protein; KEGG: spe:Spro_1920 histidine triad (HIT) protein YP_004213668.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ddd:Dda3937_00500 ISEch4 transposase YP_004213669.1 TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, maltose and glucose-specific subfamily, IIC subunit; PTS system, glucose-like IIB subunint; KEGG: spe:Spro_1914 PTS system glucose-specific transporter subunits IIBC; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_004213670.1 KEGG: ypb:YPTS_2552 metallodependent hydrolase; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease YP_004213671.1 KEGG: spe:Spro_1912 DNA polymerase III subunit delta'; TIGRFAM: DNA polymerase III, delta prime subunit; PFAM: DNA polymerase III subunit delta YP_004213672.1 TIGRFAM: thymidylate kinase; KEGG: spe:Spro_1911 thymidylate kinase; PFAM: thymidylate kinase YP_004213673.1 PFAM: aminodeoxychorismate lyase; KEGG: yen:YE1639 hypothetical protein YP_004213674.1 KEGG: yen:YE1638 4-amino-4-deoxychorismate lyase; TIGRFAM: aminodeoxychorismate lyase; PFAM: aminotransferase class IV YP_004213675.1 KEGG: dda:Dd703_1589 3-oxoacyl-(acyl carrier protein) synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase YP_004213676.1 KEGG: eca:ECA1797 3-ketoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_004213677.1 KEGG: spe:Spro_1905 malonyl CoA-acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase YP_004213678.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; manually curated; KEGG: spe:Spro_1904 3-oxoacyl-(acyl carrier protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III YP_004213679.1 manually curated; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; KEGG: yen:YE1632 glycerol-3-phosphate acyltransferase PlsX; PFAM: fatty acid synthesis plsX protein YP_004213680.1 KEGG: yen:YE1631 50S ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein YP_004213681.1 PFAM: protein of unknown function DUF177; KEGG: yen:YE1630 hypothetical protein YP_004213682.1 KEGG: dda:Dd703_1581 maf protein; TIGRFAM: maf protein; PFAM: Maf family protein YP_004213683.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: spe:Spro_1899 23S rRNA pseudouridylate synthase C; SMART: RNA-binding S4 domain protein YP_004213684.1 KEGG: spe:Spro_1898 ribonuclease E; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein YP_004213685.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: yen:YE1626 hypothetical protein YP_004213687.1 TIGRFAM: dihydroorotase, homodimeric type; KEGG: yen:YE1625 dihydroorotase; PFAM: amidohydrolase YP_004213688.1 PFAM: DinI family protein; KEGG: spe:Spro_1895 DNA damage-inducible protein I YP_004213689.1 KEGG: spe:Spro_1893 biofilm formation regulatory protein BssS YP_004213690.1 KEGG: ctu:Ctu_16360 N-methyltryptophan oxidase; PFAM: FAD dependent oxidoreductase YP_004213691.1 KEGG: ypy:YPK_1671 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_004213693.1 PFAM: protein of unknown function UPF0118; KEGG: spe:Spro_1889 transport protein YP_004213694.1 KEGG: yen:YE3595 integral membrane efflux protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_004213695.1 KEGG: yen:YE3596 drug efflux protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004213696.1 KEGG: pwa:Pecwa_2822 cytochrome b561 YP_004213697.1 PFAM: YceI family protein; KEGG: spe:Spro_1887 YceI family protein YP_004213698.1 KEGG: spe:Spro_1886 hypothetical protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004213699.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: ebi:EbC_16170 NADH-dependent flavin oxidoreductase YP_004213700.1 KEGG: spe:Spro_1884 lipid A biosynthesis lauroyl acyltransferase; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: lipid A biosynthesis acyltransferase YP_004213701.1 PFAM: DoxX family protein; KEGG: yen:YE1611 hypothetical protein YP_004213702.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE1610 MFS family transporter YP_004213703.1 KEGG: spe:Spro_1002 hypothetical protein YP_004213704.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: spe:Spro_1880 glyoxalase/bleomycin resistance protein/dioxygenase YP_004213705.1 KEGG: spe:Spro_1874 hypothetical protein YP_004213706.1 PFAM: protein of unknown function DUF1375; KEGG: spe:Spro_1872 hypothetical protein YP_004213707.1 PFAM: glycosyl transferase family 2; KEGG: spe:Spro_1871 glucosyltransferase MdoH YP_004213708.1 PFAM: periplasmic glucan biosynthesis protein MdoG; KEGG: spe:Spro_1870 glucan biosynthesis protein G YP_004213709.1 PFAM: acyltransferase 3; KEGG: spe:Spro_1869 glucans biosynthesis protein YP_004213710.1 PFAM: secretion protein HlyD family protein; KEGG: ebi:EbC_32450 secretion protein HlyD family protein YP_004213711.1 PFAM: major facilitator superfamily MFS_1; KEGG: ebi:EbC_32440 major facilitator superfamily MFS_1 YP_004213712.1 KEGG: ebi:EbC_32430 transcriptional regulator, IclR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004213713.1 PFAM: UspA domain-containing protein; KEGG: pam:PANA_2735 hypothetical protein YP_004213714.1 KEGG: eic:NT01EI_1431 hypothetical protein YP_004213715.1 PFAM: Protein of unknown function DUF2502; KEGG: yen:YE2196 hypothetical protein YP_004213716.1 KEGG: spe:Spro_1866 hypothetical protein YP_004213717.1 KEGG: spe:Spro_2832 hypothetical protein YP_004213718.1 KEGG: eic:NT01EI_1431 hypothetical protein YP_004213719.1 KEGG: pwa:Pecwa_1431 hypothetical protein YP_004213720.1 PFAM: Extracytoplasmic function sigma factor YlaC; KEGG: spe:Spro_1865 hypothetical protein YP_004213721.1 PFAM: transcription activator effector binding; KEGG: yen:YE2070 DNA gyrase inhibitor YP_004213722.1 KEGG: spe:Spro_1631 DNA-binding transcriptional repressor DeoR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004213723.1 PFAM: metallophosphoesterase; KEGG: ecd:ECDH10B_1335 serine/threonine-protein phosphatase YP_004213724.1 KEGG: mat:MARTH_orf449 50S ribosomal protein L31 YP_004213725.1 TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: pct:PC1_2667 phosphatidylglycerophosphate synthetase; PFAM: CDP-alcohol phosphatidyltransferase YP_004213726.1 TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; helix-hairpin-helix motif; KEGG: spe:Spro_1849 excinuclease ABC subunit C; SMART: Excinuclease ABC C subunit domain protein; Helix-hairpin-helix DNA-binding class 1 YP_004213727.1 KEGG: spe:Spro_1848 response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_004213728.1 PFAM: Protein of unknown function DUF2594; KEGG: spe:Spro_1847 hypothetical protein YP_004213729.1 KEGG: pct:PC1_1414 hypothetical protein YP_004213730.1 KEGG: spe:Spro_1876 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004213731.1 KEGG: spe:Spro_1875 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein YP_004213732.1 KEGG: smt:Smal_1137 hypothetical protein YP_004213734.1 PFAM: amino acid permease-associated region; KEGG: spe:Spro_1825 D-alanine/D-serine/glycine permease YP_004213735.1 KEGG: phe:Phep_3637 hypothetical protein YP_004213736.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: pam:PANA_1413 hypothetical protein YP_004213737.1 PFAM: Tetracycline transcriptional regulator YcdC domain-containing protein; regulatory protein TetR; KEGG: pam:PANA_4032 YcdC YP_004213738.1 KEGG: pam:PANA_4033 YcdM; TIGRFAM: pyrimidine utilization protein A; PFAM: luciferase YP_004213739.1 KEGG: pam:PANA_4034 YcdL; TIGRFAM: pyrimidine utilization protein B; PFAM: isochorismatase hydrolase YP_004213740.1 KEGG: pam:PANA_4035 YcdK; TIGRFAM: pyrimidine utilization protein C; PFAM: Endoribonuclease L-PSP YP_004213741.1 KEGG: pam:PANA_4036 YcdJ; TIGRFAM: pyrimidine utilization protein D; PFAM: alpha/beta hydrolase fold YP_004213742.1 PFAM: nitroreductase; KEGG: pam:PANA_4037 YcdI YP_004213743.1 KEGG: pam:PANA_4038 YcdH; TIGRFAM: pyrimidine utilization flavin reductase protein F; PFAM: flavin reductase domain protein FMN-binding YP_004213744.1 KEGG: pam:PANA_4039 YcdG; TIGRFAM: pyrimidine utilization transport protein G; uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease YP_004213745.1 PFAM: extracellular solute-binding protein family 5; KEGG: ebi:EbC_20610 ABC-type transporter, substrate binding protein YP_004213746.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3156 binding-protein-dependent transport systems inner membrane component YP_004213747.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0073 ABC transporter permease protein YP_004213748.1 KEGG: spe:Spro_3154 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004213749.1 PFAM: luciferase; KEGG: spe:Spro_3153 luciferase family protein YP_004213750.1 KEGG: spe:Spro_3152 uncharacterized peroxidase-related enzyme; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase YP_004213751.1 KEGG: ebi:EbC_20540 conserved uncharacterized protein YP_004213752.1 KEGG: yen:YE2762 ABC transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004213753.1 PFAM: inner-membrane translocator; KEGG: spe:Spro_3219 monosaccharide-transporting ATPase YP_004213754.1 PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_1455 GCN5-related N-acetyltransferase YP_004213755.1 KEGG: ebi:EbC_13960 predicted transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004213756.1 KEGG: ebi:EbC_13950 HTH-type transcriptional regulator MlrA (MerR-like regulator A); PFAM: regulatory protein MerR; SMART: regulatory protein MerR YP_004213757.1 KEGG: eta:ETA_22320 transcriptional regulator YP_004213758.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebi:EbC_13930 short chain dehydrogenase YP_004213759.1 PFAM: amine oxidase; KEGG: pct:PC1_2098 amine oxidase YP_004213760.1 PFAM: protein of unknown function DUF1365; KEGG: pct:PC1_2099 hypothetical protein YP_004213761.1 KEGG: eca:ECA2212 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase YP_004213762.1 KEGG: ebi:EbC_13890 conserved uncharacterized protein YP_004213763.1 KEGG: ebi:EbC_13880 conserved uncharacterized protein YP_004213764.1 KEGG: ebi:EbC_13870 conserved uncharacterized protein YP_004213765.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: spe:Spro_1451 hypothetical protein YP_004213766.1 KEGG: set:SEN2155 hypothetical protein YP_004213767.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_1448 binding-protein-dependent transport systems inner membrane component YP_004213768.1 KEGG: yen:YE2863 ABC transport ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_004213769.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE2864 ABC transport integral membrane subunit YP_004213770.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: yen:YE2865 substrate-binding transport protein YP_004213771.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_1443 major facilitator transporter YP_004213772.1 KEGG: ypz:YPZ3_1088 hypothetical protein YP_004213773.1 KEGG: ebi:EbC_37950 transcriptional regulator, LysR family; manually curated; PFAM: LysR substrate-binding; regulatory protein LysR YP_004213774.1 KEGG: ddd:Dda3937_02186 catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004213775.1 KEGG: spe:Spro_4201 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase dimerisation domain protein; peptidase M20 YP_004213776.1 PFAM: AbgT transporter; KEGG: ddd:Dda3937_00463 aminobenzoyl-glutamate transport protein YP_004213777.1 PFAM: Protein of unknown function DUF2236; KEGG: ppw:PputW619_0730 hypothetical protein YP_004213778.1 PFAM: regulatory protein TetR; KEGG: spe:Spro_1394 TetR family transcriptional regulator YP_004213779.1 KEGG: ebi:EbC_19800 outer membrane protein YcfR YP_004213780.1 PFAM: protein of unknown function DUF1471; KEGG: ctu:Ctu_16920 multiple stress resistance protein BhsA YP_004213781.1 PFAM: protein of unknown function DUF1471; KEGG: spe:Spro_1393 hypothetical protein YP_004213782.1 PFAM: protein of unknown function DUF1471; KEGG: ctu:Ctu_16920 multiple stress resistance protein BhsA YP_004213783.1 KEGG: ent:Ent638_3991 hypothetical protein YP_004213784.1 PFAM: protein of unknown function DUF891; KEGG: spe:Spro_4386 hypothetical protein YP_004213785.1 KEGG: spe:Spro_4385 hypothetical protein YP_004213786.1 TIGRFAM: D-alanine/D-alanine ligase; KEGG: dda:Dd703_3243 D-alanine/D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein YP_004213787.1 KEGG: pfl:PFL_2481 hypothetical protein YP_004213788.1 PFAM: Aldehyde Dehydrogenase; KEGG: kpu:KP1_0725 aldehyde dehydrogenase YP_004213789.1 SMART: transcription factor jumonji jmjC domain-containing protein; KEGG: yen:YE3022 hypothetical protein YP_004213790.1 KEGG: spe:Spro_1413 phosphonate ABC transporter inner membrane subunit; TIGRFAM: phosphonate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004213791.1 KEGG: ypb:YPTS_1313 phosphonate ABC transporter inner membrane subunit; TIGRFAM: phosphonate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004213792.1 TIGRFAM: phosphonate ABC transporter periplasmic phosphonate binding protein; phosphonate ABC transporter periplasmic phosphonate-binding protein; KEGG: ypb:YPTS_1312 phosphonate ABC transporter periplasmic phosphonate binding protein YP_004213793.1 TIGRFAM: phosphonate ABC transporter ATPase subunit; PFAM: ABC transporter related; KEGG: spe:Spro_1410 phosphonate ABC transporter ATPase subunit; SMART: AAA ATPase YP_004213794.1 KEGG: spe:Spro_1364 D-lactate dehydrogenase; PFAM: D-lactate dehydrogenase membrane binding ; FAD linked oxidase domain protein YP_004213795.1 PFAM: protein of unknown function DUF1282; KEGG: spe:Spro_1363 hypothetical protein YP_004213796.1 KEGG: afl:Aflv_2564 hypothetical protein YP_004213797.1 KEGG: avi:Avi_9202 hypothetical protein YP_004213798.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: spe:Spro_1352 D-alanyl-D-alanine endopeptidase YP_004213799.1 PFAM: dihydrouridine synthase DuS; KEGG: spe:Spro_1337 tRNA-dihydrouridine synthase C YP_004213800.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_1453 major facilitator transporter YP_004213801.1 KEGG: xbo:XBJ1_4386 hypothetical protein YP_004213802.1 KEGG: spe:Spro_1331 ATP-dependent RNA helicase RhlE; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004213803.1 PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_0813 major facilitator superfamily MFS_1 YP_004213804.1 PFAM: protein of unknown function UPF0005; KEGG: yen:YE2895 hypothetical protein YP_004213805.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: eic:NT01EI_2637 molybdopterin guanine dinucleotide biosynthesis protein MoaE YP_004213806.1 KEGG: seh:SeHA_C0931 molybdopterin synthase small subunit; TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein YP_004213807.1 KEGG: kva:Kvar_3569 molybdenum cofactor biosynthesis protein C; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis protein MoaC YP_004213808.1 KEGG: spe:Spro_1321 molybdenum cofactor biosynthesis protein B; TIGRFAM: molybdenum cofactor biosynthesis protein B; molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain YP_004213809.1 TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis domain protein; Radical SAM domain protein; KEGG: pct:PC1_1512 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB YP_004213810.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: spe:Spro_1319 hypothetical protein YP_004213811.1 PFAM: isochorismatase hydrolase; KEGG: yen:YE3592 isochorismatase family protein YP_004213812.1 PFAM: Protein of unknown function DUF2132; KEGG: ebi:EbC_21020 hypothetical protein YP_004213813.1 TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; KEGG: yen:YE2902 excinuclease ABC subunit B; SMART: DEAD-like helicase ; helicase domain protein YP_004213814.1 KEGG: spe:Spro_1316 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004213815.1 TIGRFAM: dethiobiotin synthase; KEGG: pwa:Pecwa_2961 dithiobiotin synthetase YP_004213816.1 KEGG: ypy:YPK_2929 biotin biosynthesis protein BioC; TIGRFAM: biotin biosynthesis protein BioC; PFAM: methyltransferase type 11 YP_004213817.1 TIGRFAM: 8-amino-7-oxononanoate synthase; KEGG: spe:Spro_1312 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II YP_004213818.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: biotin synthase; KEGG: ddc:Dd586_2484 biotin synthase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein YP_004213819.1 KEGG: spe:Spro_1310 adenosylmethionine--8-amino-7-oxononanoate transaminase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III YP_004213820.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_1370 LysR family transcriptional regulator YP_004213821.1 PFAM: aminotransferase class I and II; KEGG: spe:Spro_1369 aminotransferase YP_004213822.1 KEGG: spe:Spro_1368 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004213823.1 TIGRFAM: HAD superfamily (subfamily IIIB) phosphatase, TIGR01672; KEGG: kpu:KP1_0297 acid phosphatase/phosphotransferase; PFAM: acid phosphatase (Class B) YP_004213824.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: pwa:Pecwa_0513 alcohol dehydrogenase zinc-binding domain protein YP_004213825.1 PFAM: ThiJ/PfpI domain-containing protein; KEGG: pst:PSPTO_3545 ThiJ/PfpI family protein YP_004213826.1 PFAM: PEBP family protein; KEGG: spe:Spro_1308 kinase inhibitor protein YP_004213827.1 PFAM: Pectinesterase; KEGG: ddd:Dda3937_03435 pectinesterase YP_004213828.1 KEGG: ypz:YPZ3_3484 methyl-accepting chemotaxis protein II; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004213829.1 KEGG: yen:YE2909 6-phosphogluconolactonase YP_004213830.1 KEGG: spe:Spro_1306 phosphotransferase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_004213831.1 KEGG: xbo:XBJ1_4114 transcriptional activator of maltose metabolism (modular protein) YP_004213832.1 KEGG: spe:Spro_4126 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004213833.1 TIGRFAM: molybdate ABC transporter ATPase subunit; PFAM: ABC transporter related; TOBE domain-containing protein; KEGG: spe:Spro_1305 molybdate transporter ATP-binding protein; SMART: AAA ATPase YP_004213834.1 KEGG: yen:YE2912 molybdate ABC transporter permease protein; TIGRFAM: molybdate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004213835.1 KEGG: spe:Spro_1303 molybdate transporter periplasmic protein; TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_004213836.1 PFAM: Protein of unknown function DUF2592; KEGG: spe:Spro_1302 hypothetical protein YP_004213837.1 KEGG: spe:Spro_1296 DNA-binding transcriptional regulator ModE; TIGRFAM: molybdate transport repressor, ModE; PFAM: TOBE domain-containing protein; regulatory protein LysR YP_004213838.1 KEGG: spe:Spro_1295 molybdenum transport ATP-binding protein ModF; PFAM: ABC transporter related; SMART: AAA ATPase YP_004213839.1 KEGG: kse:Ksed_00880 sugar phosphate permease YP_004213840.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpn:KPN_02452 transcriptional regulator LysR YP_004213841.1 KEGG: yen:YE2917 UDP-galactose-4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_004213842.1 TIGRFAM: galactose-1-phosphate uridylyltransferase; KEGG: kpu:KP1_1716 galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein YP_004213843.1 KEGG: yen:YE2919 galactokinase; TIGRFAM: galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase domain protein YP_004213844.1 TIGRFAM: galactose mutarotase; KEGG: spe:Spro_1290 galactose mutarotase; PFAM: Aldose 1-epimerase YP_004213845.1 PFAM: PsiF repeat-containing protein; KEGG: yen:YE2921 starvation-inducible protein YP_004213846.1 TIGRFAM: phosphoglycerate mutase 1 family; KEGG: yen:YE2924 phosphoglyceromutase; PFAM: Phosphoglycerate mutase YP_004213847.1 PFAM: protein of unknown function DUF1479; KEGG: xbo:XBJ1_3889 hypothetical protein YP_004213848.1 KEGG: kva:Kvar_2519 hypothetical protein YP_004213849.1 KEGG: hse:Hsero_3621 hypothetical protein YP_004213850.1 PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE4108 hypothetical protein YP_004213851.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: eum:ECUMN_0838 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_004213852.1 KEGG: ses:SARI_02177 hypothetical protein YP_004213853.1 KEGG: spe:Spro_1284 zinc transporter ZitB; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_004213854.1 KEGG: yen:YE2927 intergral membrane NMN transport protein PnuC; TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC YP_004213855.1 TIGRFAM: quinolinate synthetase complex, A subunit; KEGG: spe:Spro_1282 quinolinate synthetase; PFAM: Quinolinate synthetase A YP_004213856.1 TIGRFAM: tol-pal system protein YbgF; KEGG: yen:YE2930 tol-pal system protein YbgF YP_004213857.1 KEGG: ebi:EbC_13110 peptidoglycan-associated lipoprotein Pal, OmpA family of porins; TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein YP_004213858.1 KEGG: yen:YE2932 translocation protein TolB; TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: TolB domain-containing protein; WD40-like beta Propeller containing protein YP_004213859.1 KEGG: ddc:Dd586_1199 protein TolA; TIGRFAM: protein TolA; TonB family protein; PFAM: Tol-Pal system TolA YP_004213860.1 KEGG: ebi:EbC_13080 biopolymer transport portein TolR, probable fragment; TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR YP_004213861.1 KEGG: ctu:Ctu_13440 colicin uptake protein TolQ; TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel YP_004213862.1 manually curated; TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; KEGG: yen:YE2936 acyl-CoA thioester hydrolase YbgC; PFAM: thioesterase superfamily protein YP_004213863.1 KEGG: pct:PC1_1244 hypothetical protein; TIGRFAM: cyd operon protein YbgE; PFAM: Cyd operon protein YbgE YP_004213864.1 KEGG: kva:Kvar_3632 cyd operon protein YbgT; TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein YP_004213865.1 KEGG: yen:YE2938 cytochrome d ubiquinol oxidase subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II YP_004213866.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: spe:Spro_1271 cytochrome bd ubiquinol oxidase subunit I YP_004213867.1 KEGG: ypb:YPTS_1227 succinyl-CoA synthetase subunit alpha; TIGRFAM: succinyl-CoA synthetase, subunit alpha; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding domain protein YP_004213868.1 TIGRFAM: succinyl-CoA synthetase, subunit beta; KEGG: cko:CKO_02431 succinyl-CoA synthetase subunit beta; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase YP_004213869.1 KEGG: ddd:Dda3937_01534 dihydrolipoyltranssuccinase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein YP_004213870.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; KEGG: spe:Spro_1267 2-oxoglutarate dehydrogenase E1 component; PFAM: Transketolase central region; dehydrogenase E1 component YP_004213871.1 KEGG: dze:Dd1591_2915 succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_004213872.1 KEGG: ddc:Dd586_1185 succinate dehydrogenase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_004213873.1 TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; KEGG: spe:Spro_1264 succinate dehydrogenase cytochrome b556 small membrane subunit YP_004213874.1 KEGG: spe:Spro_1263 succinate dehydrogenase cytochrome b556 large membrane subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit YP_004213875.1 KEGG: enc:ECL_03012 citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase YP_004213876.1 KEGG: yen:YE4059 autotransporter protein; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; Pertactin YP_004213877.1 KEGG: spe:Spro_1261 endonuclease VIII; PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein YP_004213878.1 TIGRFAM: pyrrolidone-carboxylate peptidase; KEGG: spe:Spro_1260 pyrrolidone-carboxylate peptidase; PFAM: peptidase C15 pyroglutamyl peptidase I YP_004213879.1 PFAM: LamB/YcsF family protein; KEGG: yen:YE2953 LamB/YcsF family protein YP_004213880.1 SMART: Allophanate hydrolase subunit 2; TIGRFAM: urea amidolyase related protein; KEGG: spe:Spro_1256 UreA amidolyase related protein; PFAM: Allophanate hydrolase subunit 2 YP_004213881.1 KEGG: yen:YE2955A hypothetical protein; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1 YP_004213882.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_0839 major facilitator transporter YP_004213883.1 PFAM: protein of unknown function DUF34; KEGG: yen:YE2955 hydrolase-oxidase YP_004213884.1 KEGG: spe:Spro_1253 cyclic-AMP phosphodiesterase; PFAM: cyclic-AMP phosphodiesterase class-II YP_004213885.1 KEGG: spe:Spro_1252 deoxyribodipyrimidine photolyase; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein YP_004213886.1 PFAM: protein of unknown function DUF523; protein of unknown function DUF1722; KEGG: spe:Spro_1251 hypothetical protein YP_004213887.1 PFAM: Protein of unknown function DUF2517; KEGG: spe:Spro_1250 hypothetical protein YP_004213888.1 TIGRFAM: potassium-transporting ATPase, A subunit; KEGG: ypi:YpsIP31758_1108 potassium-transporting ATPase subunit A; PFAM: K transporting ATPase A subunit YP_004213889.1 KEGG: yen:YE2961 potassium-transporting ATPase subunit B; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase YP_004213890.1 TIGRFAM: potassium-transporting ATPase, C subunit; KEGG: ebi:EbC_43380 potassium-transporting ATPase, C chain; PFAM: K transporting ATPase KdpC subunit YP_004213891.1 KEGG: spe:Spro_1245 sensor protein KdpD; PFAM: Osmosensitive K channel His kinase sensor; UspA domain-containing protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004213892.1 KEGG: spe:Spro_1244 DNA-binding transcriptional activator KdpE; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004213893.1 PFAM: transcriptional regulator PadR family protein; KEGG: ypb:YPTS_3230 PadR-like family transcriptional regulator YP_004213894.1 KEGG: spe:Spro_1241 phosphoglucomutase; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase YP_004213895.1 PFAM: SeqA family protein; KEGG: eca:ECA1335 replication initiation regulator SeqA YP_004213896.1 PFAM: alpha/beta hydrolase fold; KEGG: spe:Spro_1239 alpha/beta hydrolase fold YP_004213897.1 KEGG: spe:Spro_1238 LexA regulated protein YP_004213898.1 KEGG: yen:YE2971 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer YP_004213899.1 KEGG: ypb:YPTS_1183 flavodoxin FldA; TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase YP_004213900.1 PFAM: ferric-uptake regulator; KEGG: ddd:Dda3937_01561 DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport YP_004213901.1 KEGG: spe:Spro_1231 lipoprotein YP_004213902.1 PFAM: outer membrane porin; KEGG: spe:Spro_1230 outer membrane porin YP_004213903.1 KEGG: spe:Spro_1229 glutaminyl-tRNA synthetase; TIGRFAM: glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain YP_004213904.1 TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PTS system, glucose subfamily, IIA subunit; KEGG: yen:YE2978 PTS system, N-acetylglucosamine-specific IIABC component; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; sugar-specific permease EIIA 1 domain YP_004213905.1 KEGG: ebi:EbC_12700 glucosamine-6-phosphate deaminase; TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase YP_004213906.1 TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: yen:YE2980 N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase YP_004213907.1 PFAM: ROK family protein; regulatory protein MarR; KEGG: spe:Spro_1225 ROK family protein YP_004213908.1 KEGG: spe:Spro_1224 UMP phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004213909.1 KEGG: ddc:Dd586_1156 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II YP_004213910.1 KEGG: spe:Spro_1221 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: FAD dependent oxidoreductase YP_004213911.1 TIGRFAM: tRNA-i(6)A37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004 ; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; KEGG: spe:Spro_1220 tRNA-i(6)A37 thiotransferase enzyme MiaB; SMART: Elongator protein 3/MiaB/NifB YP_004213912.1 PFAM: PhoH family protein; KEGG: spe:Spro_1218 PhoH family protein YP_004213913.1 PFAM: protein of unknown function UPF0054; KEGG: yen:YE2987 metalloprotease YP_004213914.1 PFAM: CBS domain containing protein; transporter-associated region; KEGG: yen:YE2988 hypothetical protein YP_004213915.1 KEGG: spe:Spro_1215 apolipoprotein N-acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004213916.1 KEGG: spe:Spro_1214 glutamate and aspartate transporter subunit; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004213917.1 KEGG: kva:Kvar_3686 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004213918.1 KEGG: enc:ECL_03050 glutamate/aspartate transport system permease protein; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004213919.1 KEGG: spe:Spro_1211 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004213920.1 PFAM: protein of unknown function DUF1451; KEGG: ent:Ent638_1177 hypothetical protein YP_004213921.1 KEGG: spe:Spro_1207 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase YP_004213922.1 PFAM: Rare lipoprotein B; KEGG: spe:Spro_1206 LPS-assembly lipoprotein RlpB YP_004213923.1 TIGRFAM: DNA polymerase III, subunit delta; KEGG: spe:Spro_1205 DNA polymerase III subunit delta; PFAM: DNA polymerase III delta YP_004213924.1 TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; KEGG: spe:Spro_1204 nicotinic acid mononucleotide adenylyltransferase; PFAM: cytidylyltransferase YP_004213925.1 KEGG: dda:Dd703_1094 hypothetical protein; TIGRFAM: iojap-like protein; PFAM: Iojap-related protein YP_004213926.1 PFAM: protein of unknown function DUF163; KEGG: spe:Spro_1202 hypothetical protein YP_004213927.1 TIGRFAM: penicillin-binding protein 2; KEGG: spe:Spro_1201 penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_004213928.1 manually curated; TIGRFAM: rod shape-determining protein RodA; KEGG: yen:YE3003 cell wall shape-determining protein; PFAM: cell cycle protein YP_004213929.1 KEGG: spe:Spro_1199 rare lipoprotein A; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain-containing protein YP_004213930.1 KEGG: spe:Spro_1198 D-alanyl-D-alanine carboxypeptidase fraction A; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein YP_004213931.1 PFAM: protein of unknown function DUF493; KEGG: spe:Spro_1197 hypothetical protein YP_004213932.1 TIGRFAM: lipoate-protein ligase B; KEGG: ypb:YPTS_1149 lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase YP_004213934.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: lipoic acid synthetase; KEGG: spe:Spro_1195 lipoyl synthase; PFAM: Radical SAM domain protein YP_004213935.1 KEGG: pam:PANA_1117 TatE; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106 YP_004213936.1 KEGG: dda:Dd703_0390 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004213937.1 KEGG: ebi:EbC_12390 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004213938.1 KEGG: ebi:EbC_12380 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004213939.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ebi:EbC_12370 hydrolase YP_004213940.1 KEGG: dda:Dd703_0386 hypothetical protein YP_004213941.1 KEGG: dda:Dd703_0385 transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_004213942.1 PFAM: GCN5-related N-acetyltransferase; KEGG: esa:ESA_01926 hypothetical protein YP_004213943.1 KEGG: yen:YE3011 camphor resistance protein CrcB; TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein YP_004213944.1 PFAM: regulatory protein TetR; KEGG: spe:Spro_1191 TetR family transcriptional regulator YP_004213945.1 KEGG: spe:Spro_1190 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004213946.1 KEGG: ypb:YPTS_1144 cold shock protein CspE; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_004213947.1 PFAM: Protein of unknown function DUF2076; KEGG: spe:Spro_1006 periplasmic ligand-binding sensor protein YP_004213948.1 PFAM: periplasmic binding protein; KEGG: pwa:Pecwa_1240 periplasmic binding protein YP_004213949.1 KEGG: spe:Spro_2232 prolyl oligopeptidase; PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller YP_004213950.1 PFAM: Ppx/GppA phosphatase; KEGG: bba:Bd1525 hypothetical protein YP_004213951.1 KEGG: kva:Kvar_4794 hypothetical protein YP_004213952.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: esa:ESA_00093 hypothetical protein YP_004213953.1 KEGG: asa:ASA_1021 hypothetical protein YP_004213954.1 TIGRFAM: diguanylate cyclase; PFAM: MASE2 domain protein; GGDEF domain containing protein; KEGG: dda:Dd703_1224 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004213955.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: pct:PC1_2917 cupin 2 conserved barrel domain protein YP_004213956.1 KEGG: amu:Amuc_0384 maltose O-acetyltransferase YP_004213957.1 TIGRFAM: sugar transporter; KEGG: set:SEN2859 arabinose-proton symporter YP_004213958.1 KEGG: pwa:Pecwa_0482 hypothetical protein YP_004213959.1 PFAM: Conserved hypothetical protein CHP02453; KEGG: shw:Sputw3181_2796 hypothetical protein YP_004213960.1 KEGG: ent:Ent638_4271 hypothetical protein YP_004213961.1 KEGG: ebi:EbC_03910 conserved uncharacterized protein YP_004213962.1 KEGG: avn:Avin_12280 hypothetical protein; TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein YP_004213963.1 PFAM: Polypeptide-transport-associated domain protein ShlB-type; KEGG: avn:Avin_12270 hypothetical protein YP_004213964.1 KEGG: pam:PANA_2511 hypothetical protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_004213965.1 KEGG: lsg:lse_1635 lactate/malate dehydrogenase family protein; TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase YP_004213966.1 KEGG: yen:YE3045 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_004213967.1 KEGG: spe:Spro_1167 hypothetical protein YP_004213968.1 PFAM: protein of unknown function DUF1176; KEGG: ebi:EbC_33160 conserved uncharacterized protein YP_004213969.1 KEGG: pfo:Pfl01_4299 hypothetical protein YP_004213970.1 PFAM: NUDIX hydrolase; KEGG: dze:Dd1591_3294 NUDIX hydrolase YP_004213971.1 PFAM: Uncharacterised conserved protein UCP037266; KEGG: spe:Spro_3491 hypothetical protein YP_004213972.1 KEGG: ypb:YPTS_2869 aminoglycoside/multidrug efflux system; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_004213973.1 PFAM: arsenate reductase and related; KEGG: eta:ETA_10730 hypothetical protein YP_004213974.1 KEGG: yen:YE1147 succinyl-diaminopimelate desuccinylase; TIGRFAM: succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004213975.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: ypb:YPTS_2880 peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin YP_004213976.1 KEGG: spe:Spro_3503 hypothetical protein YP_004213977.1 KEGG: slt:Slit_2536 hypothetical protein YP_004213978.1 KEGG: slt:Slit_2537 phosphoserine transaminase; PFAM: aminotransferase class V YP_004213979.1 PFAM: phospholipase/Carboxylesterase; KEGG: ddd:Dda3937_02502 hypothetical protein YP_004213980.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ypy:YPK_1368 protein of unknown function DUF699 ATPase YP_004213981.1 PFAM: protein of unknown function DUF441; KEGG: pct:PC1_1142 hypothetical protein YP_004213982.1 PFAM: protein of unknown function zinc metallopeptidase; KEGG: spe:Spro_3506 hypothetical protein YP_004213983.1 TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: yen:YE1140 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase YP_004213984.1 KEGG: ypz:YPZ3_2697 lipoprotein YP_004213985.1 KEGG: spe:Spro_3509 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_004213986.1 PFAM: amino acid-binding ACT domain protein; KEGG: spe:Spro_3510 glycine cleavage system transcriptional repressor YP_004213987.1 KEGG: pam:PANA_2809 Bcp; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_004213988.1 PFAM: protein of unknown function UPF0118; KEGG: spe:Spro_3512 hypothetical protein YP_004213989.1 PFAM: peptidase M48 Ste24p; KEGG: spe:Spro_3517 peptidase M48 Ste24p YP_004213990.1 KEGG: ypb:YPTS_2896 arsenate reductase; TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related YP_004213991.1 KEGG: yen:YE1130 DNA replication initiation factor; TIGRFAM: DnaA regulatory inactivator Hda; PFAM: Chromosomal replication initiator DnaA YP_004213992.1 KEGG: spe:Spro_3522 uracil transporter; TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease YP_004213993.1 KEGG: pam:PANA_2826 Upp; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004213994.1 TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; KEGG: kpu:KP1_4076 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_004213995.1 KEGG: spe:Spro_3525 phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein YP_004213996.1 KEGG: yen:YE1124 spermidine acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_004213998.1 TIGRFAM: Polyphosphate kinase; KEGG: spe:Spro_3541 polyphosphate kinase; PFAM: Polyphosphate kinase YP_004213999.1 KEGG: spe:Spro_3542 exopolyphosphatase; PFAM: Ppx/GppA phosphatase YP_004214000.1 KEGG: spe:Spro_3543 diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; MASE1 domain protein; SMART: EAL domain protein; GGDEF domain containing protein YP_004214002.1 KEGG: etr:ETAE_0948 hypothetical protein YP_004214003.1 KEGG: spe:Spro_3545 magnesium transporter; TIGRFAM: magnesium transporter; PFAM: MgtE intracellular region; CBS domain containing protein; MgtE integral membrane region YP_004214004.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; PAS fold-3 domain protein; MASE1 domain protein; KEGG: cro:ROD_22031 signal transduction protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein YP_004214005.1 PFAM: AlkA domain protein; HhH-GPD family protein; KEGG: spe:Spro_3547 AraC family transcriptional regulator; SMART: HhH-GPD family protein YP_004214006.1 TIGRFAM: cysteinyl-tRNA synthetase; KEGG: spe:Spro_1166 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR YP_004214007.1 KEGG: yen:YE3049 peptidyl-prolyl cis-trans isomerase B (rotamase B); PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type YP_004214008.1 KEGG: spe:Spro_1164 UDP-2,3-diacylglucosamine hydrolase; TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; PFAM: metallophosphoesterase YP_004214009.1 PFAM: tRNA-hydroxylase; KEGG: aha:AHA_1871 tRNA-hydroxylase YP_004214011.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: ddd:Dda3937_01682 N5-carboxyaminoimidazole ribonucleotide mutase; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_004214012.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: ebi:EbC_11210 phosphoribosylaminoimidazole carboxylase ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_004214013.1 PFAM: protein of unknown function DUF214; KEGG: spe:Spro_1159 hypothetical protein YP_004214014.1 KEGG: spe:Spro_1158 ABC transporter ATP-binding protein YbbA; PFAM: ABC transporter related; SMART: AAA ATPase YP_004214015.1 KEGG: yen:YE3055 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; PFAM: lipolytic protein G-D-S-L family YP_004214016.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: spe:Spro_1156 short chain dehydrogenase YP_004214017.1 PFAM: Thioredoxin domain-containing protein; KEGG: spe:Spro_1155 thioredoxin domain-containing protein YP_004214018.1 KEGG: spe:Spro_1153 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein YP_004214019.1 PFAM: protein of unknown function DUF107; KEGG: spe:Spro_1152 hypothetical protein YP_004214020.1 TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: ent:Ent638_0963 DNA-binding transcriptional regulator CueR; SMART: regulatory protein MerR YP_004214021.1 KEGG: yen:YE3061 copper exporting ATPase; TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase YP_004214022.1 PFAM: GumN family protein; KEGG: enc:ECL_01252 GumN family protein YP_004214023.1 KEGG: spe:Spro_1148 hypothetical protein; TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region YP_004214024.1 PFAM: major facilitator superfamily MFS_1; KEGG: pay:PAU_00978 fosmidomycin resistance protein YP_004214025.1 KEGG: spe:Spro_1145 cation:proton antiport protein; TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein YP_004214026.1 KEGG: yen:YE3069 inosine-guanosine kinase; PFAM: PfkB domain protein YP_004214027.1 TIGRFAM: ferrochelatase; KEGG: yen:YE3088 ferrochelatase; PFAM: ferrochelatase YP_004214028.1 KEGG: ctu:Ctu_10810 adenylate kinase; TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain-containing protein YP_004214029.1 KEGG: yen:YE3090 heat shock protein 90; PFAM: Heat shock protein Hsp90-like; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_004214030.1 TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain-containing protein; Zinc finger C4-type, RecR; KEGG: ebi:EbC_10460 recombination protein RecR; SMART: Toprim sub domain-containing protein YP_004214031.1 PFAM: Uncharacterised protein family UPF0133; KEGG: sgl:SG0690 hypothetical protein YP_004214032.1 TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase; KEGG: spe:Spro_1135 DNA polymerase III subunits gamma and tau; SMART: AAA ATPase YP_004214033.1 KEGG: spe:Spro_0054 periplasmic alpha-amylase precursor; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_004214034.1 KEGG: spe:Spro_1134 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004214035.1 PFAM: protein of unknown function DUF454; KEGG: cko:CKO_02681 hypothetical protein YP_004214036.1 PFAM: Primosomal replication priB and priC; KEGG: spe:Spro_1132 primosomal replication PriB and PriC YP_004214037.1 PFAM: Protein of unknown function DUF2496, YbaM-related; KEGG: ypm:YP_0803 hypothetical protein YP_004214038.1 PFAM: MscS Mechanosensitive ion channel; KEGG: ypy:YPK_3204 potassium efflux protein KefA YP_004214039.1 PFAM: Tetracycline transcriptional repressor MAATS-type domain-containing protein; regulatory protein TetR; KEGG: yen:YE3099 DNA-binding transcriptional repressor AcrR YP_004214040.1 KEGG: spe:Spro_1127 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004214041.1 KEGG: enc:ECL_01233 AcrB protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_004214042.1 KEGG: ypb:YPTS_1024 50S ribosomal protein L31 type B; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31 YP_004214043.1 KEGG: spe:Spro_1124 50S ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36 YP_004214044.1 PFAM: periplasmic solute binding protein; KEGG: spe:Spro_1123 periplasmic solute binding protein YP_004214045.1 PFAM: ABC transporter; KEGG: yen:YE3110 ABC-transporter membrane protein YP_004214046.1 KEGG: yen:YE3111 ABC transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004214047.1 KEGG: spe:Spro_1120 hypothetical protein YP_004214048.1 PFAM: Biofilm formation regulator YbaJ; KEGG: yen:YE3114 hypothetical protein YP_004214049.1 PFAM: Haemolysin expression modulating family protein; KEGG: spe:Spro_1118 hemolysin expression-modulating protein YP_004214050.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebi:EbC_19580 transcriptional regulator, LysR family YP_004214051.1 KEGG: ebi:EbC_19590 adenine deaminase; PFAM: amidohydrolase YP_004214052.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: ebi:EbC_19600 xanthine/uracil/vitamin C permease YP_004214053.1 KEGG: esa:ESA_02839 hypothetical protein; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding YP_004214054.1 KEGG: spe:Spro_1112 lipoprotein YP_004214055.1 KEGG: spe:Spro_1111 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase YP_004214056.1 KEGG: spe:Spro_1110 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter YP_004214057.1 PFAM: nitrogen regulatory protein P-II; KEGG: dze:Dd1591_3057 nitrogen regulatory protein P-II 2 YP_004214060.1 KEGG: spe:Spro_1108 multidrug transporter membrane\ATP-binding components; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_004214061.1 KEGG: spe:Spro_1107 multidrug transporter membrane\ATP-binding components; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_004214062.1 KEGG: enc:ECL_01207 transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004214063.1 PFAM: Pyridoxal-5'-phosphate-dependent protein subunit beta; KEGG: pct:PC1_1056 pyridoxal-5'-phosphate-dependent protein subunit beta YP_004214064.1 KEGG: spe:Spro_1104 Cof-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_004214065.1 PFAM: extracellular solute-binding protein family 5; KEGG: spe:Spro_1103 extracellular solute-binding protein YP_004214066.1 KEGG: spe:Spro_1102 queuosine biosynthesis protein QueC; TIGRFAM: exsB protein; PFAM: Queuosine synthesis-like YP_004214067.1 PFAM: thioesterase superfamily protein; KEGG: yen:YE3128 hypothetical protein YP_004214068.1 TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; KEGG: pwa:Pecwa_3259 competence protein ComEA helix-hairpin-helix repeat protein YP_004214069.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: spe:Spro_1099 peptidyl-prolyl cis-trans isomerase (rotamase D) YP_004214070.1 KEGG: cro:ROD_04951 DNA-binding protein HU-beta; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_004214071.1 SMART: peptidase S16 lon domain protein; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: spe:Spro_1097 DNA-binding ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase YP_004214072.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; KEGG: yen:YE3133 ATP-dependent protease ATP-binding subunit ClpX; SMART: AAA ATPase YP_004214073.1 TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; KEGG: yen:YE3134 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP YP_004214074.1 KEGG: ypb:YPTS_0999 trigger factor; TIGRFAM: trigger factor; PFAM: trigger factor domain-containing protein; peptidylprolyl isomerase FKBP-type YP_004214075.1 PFAM: BolA family protein; KEGG: spe:Spro_1093 transcriptional regulator BolA YP_004214076.1 PFAM: Uncharacterized lipoprotein; KEGG: spe:Spro_1092 hypothetical protein YP_004214077.1 KEGG: spe:Spro_1091 muropeptide transporter; TIGRFAM: AmpG-related permease; PFAM: major facilitator superfamily MFS_1 YP_004214078.1 KEGG: spe:Spro_1090 cytochrome o ubiquinol oxidase subunit II; TIGRFAM: ubiquinol oxidase, subunit II; PFAM: COX aromatic rich domain protein; cytochrome c oxidase subunit II YP_004214079.1 TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; KEGG: spe:Spro_1089 cytochrome o ubiquinol oxidase subunit I; PFAM: cytochrome c oxidase subunit I YP_004214080.1 KEGG: spe:Spro_1088 cytochrome o ubiquinol oxidase subunit III; TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III YP_004214081.1 KEGG: spe:Spro_1087 cytochrome o ubiquinol oxidase subunit IV; TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV YP_004214082.1 KEGG: spe:Spro_1086 protoheme IX farnesyltransferase; TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase YP_004214083.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_1085 major facilitator transporter YP_004214084.1 PFAM: Oxidoreductase domain; oxidoreductase domain protein; KEGG: cro:ROD_34531 oxidoreductase YP_004214085.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ddd:Dda3937_00500 ISEch4 transposase YP_004214086.1 PFAM: protein of unknown function DUF520; KEGG: eca:ECA1137 nucleotide-binding protein YP_004214088.1 TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: spe:Spro_1083 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_004214089.1 KEGG: spe:Spro_1082 DJ-1 family protein; TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain-containing protein YP_004214090.1 KEGG: eca:ECA1134 thiamine biosynthesis protein ThiI; TIGRFAM: thiamine biosynthesis/tRNA modification protein ThiI; PFAM: Thiamine biosynthesis protein-like; THUMP domain-containing protein YP_004214091.1 KEGG: ctu:Ctu_09980 exodeoxyribonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit YP_004214092.1 PFAM: Polyprenyl synthetase; KEGG: spe:Spro_1079 geranyltranstransferase YP_004214093.1 KEGG: spe:Spro_1078 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain-containing protein YP_004214094.1 PFAM: aldo/keto reductase; KEGG: spe:Spro_1077 aldo/keto reductase YP_004214095.1 KEGG: spe:Spro_1076 phosphatidylglycerophosphatase A; PFAM: phosphatidylglycerophosphatase A YP_004214096.1 TIGRFAM: thiamine-monophosphate kinase; KEGG: spe:Spro_1075 thiamine monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_004214097.1 KEGG: dze:Dd1591_3088 transcription antitermination protein NusB; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44 YP_004214098.1 KEGG: ypb:YPTS_0976 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_004214099.1 TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: spe:Spro_1072 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding YP_004214100.1 PFAM: ATP-cone domain protein; KEGG: spe:Spro_1071 transcriptional regulator NrdR YP_004214101.1 KEGG: dze:Dd1591_3093 hypothetical protein YP_004214102.1 KEGG: spe:Spro_1064 preprotein translocase subunit SecF; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein YP_004214103.1 KEGG: spe:Spro_1063 preprotein translocase subunit SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein YP_004214104.1 KEGG: yen:YE3165 preprotein translocase subunit YajC; TIGRFAM: preprotein translocase YajC subunit; PFAM: YajC family protein YP_004214105.1 TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; KEGG: eca:ECA1120 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase YP_004214106.1 KEGG: ypi:YpsIP31758_3124 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein YP_004214107.1 KEGG: yen:YE3173 hypothetical protein; PFAM: protein of unknown function DUF479 YP_004214108.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; KEGG: dda:Dd703_2909 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_004214109.1 TIGRFAM: gamma-glutamyltransferase; KEGG: spe:Spro_1057 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_004214110.1 PFAM: amino acid permease-associated region; KEGG: spe:Spro_1046 proline-specific permease YP_004214111.1 KEGG: spe:Spro_1045 branched-chain amino acid transport system II carrier protein; TIGRFAM: branched-chain amino acid transport system II carrier protein; PFAM: branched-chain amino acid transport system II carrier protein YP_004214112.1 PFAM: methionine synthase vitamin-B12 independent; KEGG: eay:EAM_0952 cobalamin-independent methionine biosynthesis protein YP_004214113.1 KEGG: pay:PAU_01640 hypothetical protein YP_004214114.1 KEGG: pay:PAU_01639 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004214115.1 TIGRFAM: phosphate regulon sensor kinase PhoR; PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: ypy:YPK_3275 phosphate regulon sensor protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein YP_004214116.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; KEGG: spe:Spro_1041 two component transcriptional regulator; SMART: response regulator receiver YP_004214117.1 KEGG: spe:Spro_1040 exonuclease subunit SbcD; TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase YP_004214118.1 KEGG: spe:Spro_1039 exonuclease SbcC; TIGRFAM: exonuclease SbcC; PFAM: SMC domain protein YP_004214119.1 KEGG: azl:AZL_e02010 hypothetical protein YP_004214120.1 PFAM: ROK family protein; KEGG: yen:YE3185 fructokinase YP_004214121.1 PFAM: exonuclease RdgC; KEGG: spe:Spro_1027 recombination associated protein YP_004214122.1 PFAM: protein of unknown function DUF1255; KEGG: ypb:YPTS_0953 hypothetical protein YP_004214123.1 PFAM: AroM family protein; KEGG: spe:Spro_1025 hypothetical protein YP_004214124.1 PFAM: protein of unknown function DUF1177; KEGG: spe:Spro_1024 hypothetical protein YP_004214125.1 PFAM: Oligopeptide transporter OPT superfamily protein; KEGG: spe:Spro_1023 oligopeptide transporter OPT superfamily protein YP_004214126.1 KEGG: spe:Spro_1022 IclR family transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_004214127.1 KEGG: etr:ETAE_1298 hypothetical protein YP_004214128.1 KEGG: spe:Spro_1018 shikimate kinase II; PFAM: shikimate kinase YP_004214129.1 KEGG: spe:Spro_1013 methyltransferase YP_004214130.1 PFAM: protein of unknown function DUF1471; KEGG: ebi:EbC_33250 conserved uncharacterized protein YP_004214131.1 PFAM: protein of unknown function DUF808; KEGG: scl:sce1374 hypothetical protein YP_004214132.1 PFAM: methyltransferase type 11; KEGG: yen:YE3193 hypothetical protein YP_004214133.1 SMART: helix-turn-helix domain protein; KEGG: pwa:Pecwa_3439 transcriptional regulator, XRE family YP_004214134.1 PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein YP_004214135.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hse:Hsero_0157 acetyltransferase YP_004214136.1 KEGG: spe:Spro_1432 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004214137.1 KEGG: spe:Spro_1449 hypothetical protein YP_004214138.1 PFAM: fatty acid desaturase; KEGG: spe:Spro_1444 fatty acid desaturase YP_004214139.1 KEGG: yen:YE1296 glucose-1-phosphatase/inositol phosphatase; PFAM: histidine acid phosphatase YP_004214140.1 PFAM: Antimicrobial peptide resistance and lipid A acylation PagP; KEGG: ebi:EbC_12320 antimicrobial peptide resistance and lipid A acylation protein YP_004214141.1 PFAM: Antimicrobial peptide resistance and lipid A acylation PagP; KEGG: spe:Spro_0993 palmitoyl transferase YP_004214142.1 TIGRFAM: phosphoribosylformylglycinamidine synthase; KEGG: spe:Spro_3654 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_004214143.1 manually curated; PFAM: lytic transglycosylase catalytic; extracellular solute-binding protein family 3; KEGG: yen:YE1031 transglycosylase; SMART: extracellular solute-binding protein family 3 YP_004214144.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: spe:Spro_3656 CMP/dCMP deaminase zinc-binding YP_004214145.1 TIGRFAM: HAD superfamily (subfamily IF) hydrolase, YfhB; KEGG: spe:Spro_3659 hypothetical protein YP_004214146.1 KEGG: spe:Spro_3660 phosphotransferase system EIIC; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_004214147.1 KEGG: spe:Spro_3661 N-acetylmuramic acid-6-phosphate etherase; TIGRFAM: glucokinase regulatory-like protein; PFAM: sugar isomerase (SIS) YP_004214148.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: spe:Spro_3662 DNA-binding transcriptional regulator YP_004214149.1 KEGG: spe:Spro_3664 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_004214150.1 KEGG: ypb:YPTS_2997 4'-phosphopantetheinyl transferase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase YP_004214151.1 TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; KEGG: yen:YE1020 pyridoxine 5'-phosphate synthase; PFAM: Pyridoxal phosphate biosynthetic protein PdxJ YP_004214152.1 KEGG: yen:YE1019 DNA repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO YP_004214153.1 KEGG: ddc:Dd586_3105 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein YP_004214154.1 KEGG: spe:Spro_3669 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; manually curated; TIGRFAM: ribonuclease III; SMART: ribonuclease III; double-stranded RNA binding domain protein YP_004214155.1 KEGG: spe:Spro_3670 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Peptidase S26, conserved region YP_004214156.1 KEGG: pwa:Pecwa_1202 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein YP_004214157.1 KEGG: spe:Spro_3672 hypothetical protein YP_004214158.1 PFAM: Positive regulator of sigma(E) RseC/MucC; KEGG: ypb:YPTS_3005 SoxR reducing system protein RseC YP_004214159.1 PFAM: MucB/RseB family protein; KEGG: spe:Spro_3674 periplasmic negative regulator of sigmaE YP_004214160.1 PFAM: Anti sigma-E protein RseA family protein; Anti sigma-E protein RseA domain protein; KEGG: spe:Spro_3675 anti-RNA polymerase sigma factor SigE YP_004214161.1 KEGG: spe:Spro_3676 RNA polymerase sigma factor RpoE; TIGRFAM: RNA polymerase sigma factor RpoE; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_004214162.1 KEGG: yen:YE1009 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_004214163.1 KEGG: ypb:YPTS_3010 methyltransferase small; manually curated; PFAM: methyltransferase small YP_004214164.1 KEGG: ypy:YPK_1179 ATP-dependent RNA helicase SrmB; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004214165.1 PFAM: formate C-acetyltransferase glycine radical; KEGG: yen:YE1003 autonomous glycyl radical cofactor GrcA YP_004214166.1 KEGG: spe:Spro_3683 uracil-DNA glycosylase; TIGRFAM: uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily YP_004214167.1 PFAM: GrpE protein; KEGG: sgl:SG1798 heat shock protein GrpE YP_004214168.1 PFAM: ATP-NAD/AcoX kinase; KEGG: spe:Spro_3685 inorganic polyphosphate/ATP-NAD kinase YP_004214169.1 KEGG: ypi:YpsIP31758_2889 recombination and repair protein; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein YP_004214170.1 PFAM: SmpA/OmlA domain-containing protein; KEGG: ebi:EbC_34280 small protein A YP_004214171.1 PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein YP_004214172.1 PFAM: protein of unknown function UPF0125; KEGG: spe:Spro_3688 hypothetical protein YP_004214173.1 PFAM: cyclase/dehydrase; KEGG: yen:YE0995 hypothetical protein YP_004214174.1 KEGG: epy:EpC_09860 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein YP_004214175.1 KEGG: esa:ESA_02980 hypothetical protein YP_004214176.1 manually curated; PFAM: regulatory protein ArsR; KEGG: ent:Ent638_2275 ArsR family transcriptional regulator; SMART: regulatory protein ArsR YP_004214177.1 KEGG: ent:Ent638_2274 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004214178.1 KEGG: cro:ROD_44821 polysaccharide degrading enzyme; PFAM: glycoside hydrolase family 18; Carbohydrate-binding family V/XII; SMART: chitinase II YP_004214179.1 TIGRFAM: cationic amino acid ABC transporter periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: ebi:EbC_03840 lysine-arginine-ornithine ABC transporter periplasmic ligand binding protein; SMART: extracellular solute-binding protein family 3 YP_004214180.1 KEGG: set:SEN3097 galactitol utilization operon repressor; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004214181.1 KEGG: set:SEN3092 sugar kinase; TIGRFAM: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit; PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ YP_004214182.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: cro:ROD_47491 component IIA of galactitol-specific phosphotransferase system YP_004214183.1 KEGG: ctu:Ctu_04370 PTS system galactitol-specific transporter subunit IIB; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit YP_004214184.1 KEGG: set:SEN3095 PTS system, galactitol-specific IIC component; TIGRFAM: PTS system, galactitol-specific IIC subunit; PFAM: PTS system Galactitol-specific IIC component YP_004214185.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: kpn:KPN_03551 galactitol-1-phosphate dehydrogenase YP_004214186.1 TIGRFAM: class II aldolase, tagatose bisphosphate family; ketose-bisphosphate aldolase; KEGG: spe:Spro_2579 tagatose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_004214187.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bav:BAV1624 acetyltransferase YP_004214188.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ara:Arad_2738 phosphinothricin acetyltransferase (antibiotic resistance) protein YP_004214189.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Ada metal-binding domain-containing protein; helix-turn-helix- domain containing protein AraC type; methylguanine DNA methyltransferase ribonuclease domain protein; methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: pct:PC1_0793 transcriptional regulator, AraC family; SMART: Helix-turn-helix, AraC domain YP_004214190.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xca:xccb100_3920 N-acetyltransferase YP_004214191.1 KEGG: vap:Vapar_2210 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein YP_004214192.1 PFAM: peptidase M28; KEGG: sti:Sthe_2595 peptidase M28 YP_004214193.1 KEGG: ebi:EbC_02780 conserved uncharacterized protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004214194.1 KEGG: ebi:EbC_02790 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase dimerisation domain protein; peptidase M20 YP_004214195.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebi:EbC_02800 LysR family transcriptional regulator YP_004214196.1 KEGG: pct:PC1_2754 phenazine biosynthesis protein PhzF family; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein YP_004214197.1 KEGG: spe:Spro_0025 L-lysine 6-monooxygenase (NADPH) YP_004214198.1 KEGG: spe:Spro_3900 hemolysin III family channel protein; TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein YP_004214199.1 KEGG: spe:Spro_3901 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_004214200.1 PFAM: extracellular solute-binding protein family 1; KEGG: ddd:Dda3937_02271 ABC transporter periplasmic binding protein YP_004214201.1 KEGG: pct:PC1_0630 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004214202.1 PFAM: metallophosphoesterase; KEGG: dda:Dd703_3268 metallophosphoesterase YP_004214203.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pwa:Pecwa_0842 binding-protein-dependent transport systems inner membrane component YP_004214204.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pct:PC1_0627 binding-protein-dependent transport systems inner membrane component YP_004214205.1 KEGG: enc:ECL_02156 hypothetical protein YP_004214206.1 KEGG: pct:PC1_0400 hypothetical protein YP_004214207.1 PFAM: PfkB domain protein; KEGG: pwa:Pecwa_3718 ribokinase YP_004214208.1 PFAM: ROK family protein; KEGG: pam:PANA_2791 AlsK YP_004214209.1 KEGG: pwa:Pecwa_3720 allulose-6-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase YP_004214210.1 PFAM: inner-membrane translocator; KEGG: pwa:Pecwa_3721 inner-membrane translocator YP_004214211.1 PFAM: inner-membrane translocator; KEGG: pwa:Pecwa_3722 inner-membrane translocator YP_004214212.1 KEGG: pwa:Pecwa_3723 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase YP_004214213.1 KEGG: pwa:Pecwa_3724 carbohydrate ABC transporter periplasmic-binding protein YP_004214214.1 KEGG: pam:PANA_2786 YulB; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004214215.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: spe:Spro_3909 hypothetical protein YP_004214216.1 KEGG: spe:Spro_3914 glycine dehydrogenase; TIGRFAM: glycine dehydrogenase; PFAM: Glycine cleavage system P-protein-like YP_004214217.1 KEGG: spe:Spro_3915 glycine cleavage system H protein; TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein YP_004214218.1 KEGG: spe:Spro_3916 glycine cleavage system aminomethyltransferase T; TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel YP_004214219.1 KEGG: spe:Spro_3917 hypothetical protein; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase YP_004214220.1 manually curated; TIGRFAM: 2-polyprenyl-6-methoxyphenol 4-hydroxylase; Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; KEGG: ypi:YpsIP31758_0861 2-octaprenyl-6-methoxyphenyl hydroxylase; PFAM: FAD dependent oxidoreductase YP_004214221.1 PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: ypb:YPTS_3317 proline aminopeptidase P II YP_004214222.1 KEGG: spe:Spro_3920 hypothetical protein; TIGRFAM: yecA family protein; PFAM: Uncharacterised protein family UPF0149 (YgfB) YP_004214223.1 PFAM: protein of unknown function DUF710; KEGG: yen:YE3398 Z-ring-associated protein YP_004214224.1 manually curated; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: spe:Spro_3922 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase YP_004214225.1 KEGG: ebi:EbC_19960 hypothetical protein YP_004214226.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; KEGG: epy:EpC_29500 D-3-phosphoglycerate dehydrogenase YP_004214227.1 TIGRFAM: ribose 5-phosphate isomerase; KEGG: spe:Spro_3924 ribose-5-phosphate isomerase A; PFAM: Ribose 5-phosphate isomerase YP_004214228.1 KEGG: spe:Spro_3925 chromosome replication initiation inhibitor protein; TIGRFAM: transcriptional regulator, ArgP family; PFAM: regulatory protein LysR; LysR substrate-binding YP_004214229.1 KEGG: bgf:BC1003_4236 LysR family transcriptional regulator; manually curated; PFAM: LysR substrate-binding; regulatory protein LysR YP_004214230.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_4237 short-chain dehydrogenase/reductase SDR YP_004214231.1 PFAM: protein of unknown function DUF541; KEGG: spe:Spro_3926 hypothetical protein YP_004214232.1 KEGG: spe:Spro_3927 arginine exporter protein; TIGRFAM: L-lysine exporter; PFAM: lysine exporter protein (LYSE/YGGA) YP_004214233.1 PFAM: MscS Mechanosensitive ion channel; Conserved TM helix repeat-containing protein; KEGG: ypb:YPTS_3326 MscS mechanosensitive ion channel YP_004214234.1 TIGRFAM: oligosaccharide/H+ symporter, major facilitator superfamily (MFS); KEGG: eca:ECA1489 galactoside permease YP_004214235.1 PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 42 domain 5 loop region; KEGG: spe:Spro_3173 beta-D-galactosidase YP_004214236.1 KEGG: dze:Dd1591_2732 lac repressor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_004214237.1 KEGG: yen:YE3413 fructose-bisphosphate aldolase; TIGRFAM: fructose-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_004214238.1 KEGG: dda:Dd703_0554 phosphoglycerate kinase; PFAM: phosphoglycerate kinase YP_004214239.1 TIGRFAM: D-erythrose-4-phosphate dehydrogenase; KEGG: yen:YE3415 erythrose 4-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_004214240.1 KEGG: spe:Spro_3954 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain-containing protein; Transketolase central region YP_004214241.1 PFAM: peptidase M48 Ste24p; KEGG: spe:Spro_3955 peptidase M48 Ste24p YP_004214242.1 PFAM: Fimbrial protein domain-containing protein; KEGG: enc:ECL_00942 hypothetical protein YP_004214243.1 PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: enc:ECL_00941 chaperone protein EcpD YP_004214244.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: enc:ECL_00940 fimbrial usher protein YP_004214245.1 PFAM: Fimbrial protein domain-containing protein; KEGG: enc:ECL_00939 fimbrial protein YP_004214246.1 PFAM: Fimbrial protein domain-containing protein; KEGG: enc:ECL_00938 fimbrial protein YP_004214247.1 PFAM: Fimbrial protein domain-containing protein; KEGG: seh:SeHA_C0206 fimbrial protein YP_004214248.1 PFAM: Fimbrial protein domain-containing protein; KEGG: enc:ECL_00936 hypothetical protein YP_004214249.1 KEGG: spe:Spro_3973 arginine decarboxylase; TIGRFAM: arginine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2 YP_004214250.1 TIGRFAM: S-adenosylmethionine synthetase; KEGG: ebi:EbC_36630 S-adenosylmethionine synthetase (methionine adenosyltransferase); PFAM: S-adenosylmethionine synthetase YP_004214251.1 KEGG: ebi:EbC_44770 fimbrial protein YP_004214252.1 KEGG: ebi:EbC_44780 CS1 type fimbrial major subunit YP_004214253.1 KEGG: ebi:EbC_44790 outer membrane fimbrial usher protein YP_004214254.1 PFAM: CblD family pilus biogenesis initiator protein; KEGG: spe:Spro_0214 CblD family pilus biogenesis initiator protein YP_004214255.1 PFAM: CblD family pilus biogenesis initiator protein; KEGG: spe:Spro_0214 CblD family pilus biogenesis initiator protein YP_004214256.1 KEGG: eck:EC55989_3511 fimbrial protein YP_004214257.1 TIGRFAM: sugar transporter; KEGG: spe:Spro_1160 sugar transporter YP_004214258.1 SMART: protein of unknown function SprT; KEGG: yen:YE3424 hypothetical protein YP_004214259.1 KEGG: ecm:EcSMS35_3087 endonuclease I; PFAM: Endonuclease I YP_004214260.1 PFAM: protein of unknown function DUF558; KEGG: spe:Spro_4025 hypothetical protein YP_004214261.1 TIGRFAM: glutathione synthetase; KEGG: ddd:Dda3937_00424 glutathione synthetase; PFAM: glutathione synthetase ATP-binding; glutathione synthetase domain protein YP_004214262.1 PFAM: protein of unknown function DUF179; KEGG: spe:Spro_4027 hypothetical protein YP_004214263.1 KEGG: pwa:Pecwa_3911 Holliday junction resolvase-like protein; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold YP_004214264.1 KEGG: spe:Spro_4029 twitching motility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E YP_004214265.1 PFAM: alanine racemase domain protein; KEGG: spe:Spro_4030 alanine racemase domain-containing protein YP_004214266.1 TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: spe:Spro_4031 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_004214267.1 PFAM: protein of unknown function YGGT; KEGG: yen:YE3435 hypothetical protein YP_004214268.1 PFAM: protein of unknown function DUF167; KEGG: cro:ROD_50331 hypothetical protein YP_004214269.1 KEGG: spe:Spro_4034 deoxyribonucleotide triphosphate pyrophosphatase; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein YP_004214270.1 TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; KEGG: ebi:EbC_36750 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB YP_004214271.1 KEGG: ebi:EbC_36760 conserved uncharacterized protein YP_004214272.1 TIGRFAM: Glutaminase, core; KEGG: etr:ETAE_0268 glutaminase; PFAM: Glutaminase, core YP_004214273.1 PFAM: protein of unknown function DUF469; KEGG: enc:ECL_04286 hypothetical protein YP_004214274.1 KEGG: spe:Spro_4042 tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: methyltransferase YP_004214275.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; KEGG: spe:Spro_4043 adenine DNA glycosylase; SMART: HhH-GPD family protein; iron-sulfur cluster loop YP_004214276.1 PFAM: Fe(II) trafficking protein YggX; KEGG: ypb:YPTS_3359 hypothetical protein YP_004214277.1 PFAM: lytic transglycosylase catalytic; KEGG: spe:Spro_4045 murein transglycosylase C YP_004214278.1 PFAM: glycosyl transferase group 1; KEGG: pmr:PMI3190 glycosyl transferase YP_004214279.1 KEGG: fba:FIC_01937 hypothetical protein YP_004214280.1 PFAM: glycosyl transferase group 1; KEGG: gwc:GWCH70_3261 glycosyl transferase group 1 YP_004214281.1 KEGG: mcl:MCCL_0673 hypothetical protein YP_004214282.1 PFAM: glycosyl transferase group 1; KEGG: spn:SP_0353 capsular polysaccharide biosynthesis protein Cps4H YP_004214283.1 KEGG: pjd:Pjdr2_0357 hypothetical protein YP_004214284.1 PFAM: polysaccharide biosynthesis protein; KEGG: enc:ECL_03359 lipopolysaccharide biosynthesis protein YP_004214285.1 TIGRFAM: capsular exopolysaccharide family; KEGG: ctu:Ctu_27570 tyrosine kinase; PFAM: lipopolysaccharide biosynthesis protein YP_004214286.1 manually curated; PFAM: Protein-tyrosine phosphatase, low molecular weight; KEGG: spe:Spro_1584 protein tyrosine phosphatase; SMART: Protein-tyrosine phosphatase, low molecular weight YP_004214287.1 KEGG: kva:Kvar_1551 polysaccharide export protein; manually curated; PFAM: polysaccharide export protein; Soluble ligand binding domain YP_004214288.1 KEGG: etr:ETAE_0101 UDP-N-acetylmuramyl pentapeptide phosphotransferase; TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; PFAM: Glycosyl transferase, family 4, conserved region YP_004214289.1 KEGG: spe:Spro_4047 ornithine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein YP_004214290.1 PFAM: major facilitator superfamily MFS_1; KEGG: ddd:Dda3937_00340 D-galactonate transporter YP_004214291.1 PFAM: Conserved hypothetical protein CHP00022; KEGG: pwa:Pecwa_4126 hypothetical protein YP_004214292.1 PFAM: dihydrodipicolinate synthetase; KEGG: dda:Dd703_0301 dihydrodipicolinate synthetase YP_004214293.1 TIGRFAM: ribokinase; PFAM: PfkB domain protein; regulatory protein DeoR; KEGG: ddd:Dda3937_00343 ribokinase; SMART: regulatory protein DeoR YP_004214294.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: cro:ROD_07901 endonuclease/exonuclease/phosphatase YP_004214295.1 KEGG: cko:CKO_02338 cardiolipin synthase 2; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase YP_004214296.1 KEGG: sea:SeAg_B0846 inner membrane protein YbhN YP_004214297.1 KEGG: spe:Spro_1916 Mn2+/Fe2+ transporter; TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein YP_004214298.1 KEGG: bpr:GBP346_A2028 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_004214299.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: vap:Vapar_3354 periplasmic binding protein/LacI transcriptional regulator YP_004214300.1 PFAM: acyltransferase 3; KEGG: ebi:EbC_09730 acyltransferase family protein YP_004214301.1 KEGG: nam:NAMH_1656 O-antigen polymerase family YP_004214302.1 KEGG: ccb:Clocel_2983 fibronectin type III domain-containing protein YP_004214303.1 PFAM: acyltransferase 3; KEGG: vvu:VV2_1626 hypothetical protein YP_004214304.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ppr:PBPRB1640 hypothetical protein YP_004214305.1 KEGG: kpu:KP1_3711 GDP-D-mannose dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_004214306.1 PFAM: polysaccharide biosynthesis protein; KEGG: kpn:KPN_02500 polysaccharide biosynthesis protein YP_004214307.1 PFAM: glycosyl transferase group 1; KEGG: see:SNSL254_A2264 glycosyl transferase, group 1 YP_004214308.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: ecr:ECIAI1_2103 phosphomannomutase (PMM) YP_004214309.1 TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: sgl:SG1114 mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase; mannose-6-phosphate isomerase type II YP_004214310.1 PFAM: glycosyl transferase group 1; KEGG: eta:ETA_13310 exopolysaccharide biosynthesis glycosyl transferase YP_004214311.1 PFAM: glycosyl transferase group 1; KEGG: see:SNSL254_A2265 second mannosyl transferase YP_004214312.1 PFAM: glycosyl transferase group 1; KEGG: bcx:BCA_5415 glycosyl transferase, group 1 family protein YP_004214313.1 TIGRFAM: capsular exopolysaccharide family; KEGG: spe:Spro_1585 non-specific protein-tyrosine kinase; PFAM: lipopolysaccharide biosynthesis protein YP_004214314.1 KEGG: spe:Spro_1584 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_004214315.1 PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: kpu:KP1_3720 capsule polysaccharide export protein precursor YP_004214316.1 TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase, WbaP; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: ecx:EcHS_A2190 sugar transferase; PFAM: sugar transferase YP_004214317.1 PFAM: protein of unknown function DUF940 membrane lipoprotein; KEGG: ebi:EbC_03020 conserved uncharacterized protein YP_004214318.1 PFAM: protein of unknown function DUF1017; KEGG: pam:PANA_0243 YmcB YP_004214319.1 KEGG: ebi:EbC_03000 lipoprotein YmcC YP_004214320.1 KEGG: pam:PANA_0245 YjbE YP_004214321.1 KEGG: yen:YE1324 hypothetical protein; PFAM: EAL domain protein; SMART: EAL domain protein YP_004214322.1 KEGG: ent:Ent638_0524 DNA-binding transcriptional activator BglJ; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_004214324.1 KEGG: ent:Ent638_2565 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase YP_004214325.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: kpe:KPK_A0100 efflux transporter, RND family, MFP subunit YP_004214326.1 PFAM: acriflavin resistance protein; KEGG: ent:Ent638_2568 acriflavin resistance protein YP_004214327.1 KEGG: kpe:KPK_A0098 hypothetical protein YP_004214328.1 KEGG: ses:SARI_03126 hypothetical protein YP_004214329.1 KEGG: ses:SARI_03126 hypothetical protein YP_004214330.1 KEGG: ses:SARI_03125 hypothetical protein YP_004214331.1 KEGG: xne:XNC1_4392 DNA-binding protein; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein YP_004214332.1 PFAM: AzlC family protein; KEGG: pam:PANA_4178 AzlC YP_004214333.1 PFAM: branched-chain amino acid transport; KEGG: pam:PANA_4177 hypothetical protein YP_004214334.1 PFAM: amino acid permease-associated region; KEGG: sfv:SFV_2073 amino acid/amine transport protein YP_004214335.1 KEGG: pct:PC1_0650 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004214336.1 PFAM: lysine exporter protein (LYSE/YGGA); KEGG: eta:ETA_33760 transporter, LysE family YP_004214337.1 KEGG: cwo:Cwoe_1009 hypothetical protein YP_004214338.1 PFAM: protein of unknown function DUF1345; KEGG: pam:PANA_4078 hypothetical protein YP_004214339.1 KEGG: ddc:Dd586_1102 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004214340.1 KEGG: dze:Dd1591_2999 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004214341.1 PFAM: aminotransferase class I and II; KEGG: sro:Sros_2228 aminotransferase protein YP_004214342.1 PFAM: glycoside hydrolase family 19; PKD domain containing protein; Carbohydrate-binding family V/XII; KEGG: cko:CKO_02215 hypothetical protein; SMART: Carbohydrate-binding family V/XII; PKD domain containing protein YP_004214343.1 KEGG: ctu:Ctu_06420 hypothetical protein YP_004214344.1 PFAM: regulatory protein LysR; KEGG: sek:SSPA0013 regulatory protein YP_004214345.1 PFAM: Peptidoglycan binding domain; protein of unknown function DUF847; KEGG: ent:Ent638_1027 hypothetical protein YP_004214346.1 KEGG: esa:ESA_03319 hypothetical protein YP_004214347.1 PFAM: glycoside hydrolase family 18; Carbohydrate-binding family V/XII; KEGG: esa:ESA_03317 hypothetical protein; SMART: chitinase II; Carbohydrate-binding family V/XII YP_004214348.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pfl:PFL_2915 LysR family transcriptional regulator YP_004214349.1 PFAM: major facilitator superfamily MFS_1; KEGG: bte:BTH_I3246 EmrB/QacA family drug resistance transporter YP_004214350.1 PFAM: Spore coat protein U; KEGG: pag:PLES_50341 hypothetical protein YP_004214351.1 PFAM: Spore coat protein U; KEGG: pap:PSPA7_5298 hypothetical protein YP_004214352.1 PFAM: Spore coat protein U; KEGG: pwa:Pecwa_1448 spore coat U domain protein YP_004214353.1 KEGG: eca:ECA3075 fimbrial chaperone YP_004214354.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: pct:PC1_2819 fimbrial biogenesis outer membrane usher protein YP_004214355.1 PFAM: Spore coat protein U; KEGG: pau:PA14_61550 hypothetical protein YP_004214356.1 PFAM: Cold-shock protein DNA-binding; KEGG: enc:ECL_03124 cold-shock DNA-binding domain protein YP_004214357.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: har:HEAR1490 oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions, repair of alkylated DNA YP_004214358.1 PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; KEGG: bid:Bind_3294 shikimate dehydrogenase substrate binding subunit YP_004214359.1 TIGRFAM: glucarate dehydratase; KEGG: pct:PC1_3395 glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein YP_004214360.1 KEGG: eca:ECA3576 glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein YP_004214361.1 KEGG: pct:PC1_3397 D-galactonate transporter; TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1 YP_004214362.1 PFAM: sugar diacid recognition domain protein; KEGG: pct:PC1_3095 carbohydrate diacid transcriptional activator CdaR YP_004214363.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: yen:YE0741 serine endoprotease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_004214364.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; KEGG: spe:Spro_0788 deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain YP_004214365.1 TIGRFAM: MTA/SAH nucleosidase; KEGG: spe:Spro_0787 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; PFAM: purine or other phosphorylase family 1 YP_004214366.1 PFAM: periplasmic binding protein; KEGG: pay:PAU_00826 vitamin b12-binding protein precursor YP_004214367.1 KEGG: ebi:EbC_08000 conserved uncharacterized protein YP_004214368.1 KEGG: spe:Spro_0783 iron-sulfur cluster assembly accessory protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein YP_004214369.1 PFAM: Cl- channel voltage-gated family protein; KEGG: spe:Spro_0782 chloride channel protein YP_004214370.1 KEGG: yen:YE0734 glutamate-1-semialdehyde aminotransferase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III YP_004214371.1 PFAM: transport system permease protein; KEGG: spe:Spro_3976 iron-hydroxamate transporter permease subunit YP_004214372.1 PFAM: periplasmic binding protein; KEGG: spe:Spro_3977 iron-hydroxamate transporter substrate-binding subunit YP_004214373.1 KEGG: ypb:YPTS_0771 iron-hydroxamate transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_004214374.1 KEGG: ecg:E2348C_0157 ferrichrome outer membrane transporter; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor YP_004214375.1 TIGRFAM: penicillin-binding protein 1B; KEGG: spe:Spro_3981 penicillin-binding protein 1B; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_004214376.1 TIGRFAM: ATP-dependent helicase HrpB; PFAM: Helicase ATP-dependent domain protein; helicase-associated domain protein; helicase domain protein; KEGG: spe:Spro_3982 ATP-dependent RNA helicase HrpB; SMART: DEAD-like helicase ; helicase domain protein YP_004214377.1 KEGG: spe:Spro_3983 2'-5' RNA ligase; TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX YP_004214378.1 KEGG: plu:plu0877 sugar fermentation stimulation protein A; TIGRFAM: sugar fermentation stimulation protein; PFAM: sugar fermentation stimulation protein YP_004214379.1 TIGRFAM: RNA polymerase-binding protein DksA; KEGG: kpu:KP1_0973 RNA polymerase-binding transcription factor YP_004214380.1 PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; KEGG: yen:YE0724 glutamyl-Q tRNA(Asp) synthetase YP_004214381.1 KEGG: ypy:YPK_3470 poly(A) polymerase I; TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region YP_004214382.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; KEGG: ypb:YPTS_0762 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK YP_004214383.1 KEGG: spe:Spro_3989 sensor protein QseC; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004214384.1 KEGG: spe:Spro_3990 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004214385.1 TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; KEGG: ypi:YpsIP31758_3343 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase YP_004214386.1 KEGG: yen:YE0719 pantoate--beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; cytidyltransferase-related domain protein; PFAM: Pantoate-beta-alanine ligase YP_004214387.1 TIGRFAM: aspartate 1-decarboxylase; KEGG: pwa:Pecwa_1158 aspartate alpha-decarboxylase; PFAM: aspartate decarboxylase YP_004214388.1 PFAM: ABC transporter; KEGG: spe:Spro_3995 ABC transporter YP_004214389.1 KEGG: spe:Spro_3996 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004214390.1 KEGG: cko:CKO_03241 carbonic anhydrase; PFAM: carbonic anhydrase YP_004214391.1 KEGG: cdl:CDR20291_2141 hypothetical protein YP_004214392.1 KEGG: pay:PAU_02414 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796 YP_004214393.1 KEGG: pay:PAU_02413 hypothetical protein YP_004214394.1 KEGG: plu:plu2153 hypothetical protein YP_004214395.1 TIGRFAM: hypoxanthine phosphoribosyltransferase; KEGG: yen:YE0713 hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004214396.1 KEGG: spe:Spro_3574 DNA-bindng transcriptional repressor SrlR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004214397.1 PFAM: glucitol operon activator; KEGG: spe:Spro_3573 DNA-binding transcriptional activator GutM YP_004214398.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eay:EAM_0524 sorbitol-6-phosphate dehydrogenase YP_004214399.1 PFAM: PTS system glucitol/sorbitol-specific IIA component; KEGG: spe:Spro_3571 PTS system glucitol/sorbitol-specific transporter subunit IIA YP_004214400.1 TIGRFAM: PTS system, glucitol/sorbitol-specific, IIBC subunit; KEGG: yen:YE1097 PTS system, glucitol/sorbitol-specific IIBC component; PFAM: Sorbitol phosphotransferase protein II domain-containing protein YP_004214401.1 KEGG: yen:YE1098 PTS system, glucitol/sorbitol-specific IIC2 component; TIGRFAM: PTS system, glucitol/sorbitol-specific, IIC subunit; PFAM: PTS system protein II sorbitol-specific factor YP_004214402.1 KEGG: spe:Spro_3999 multicopper oxidase; manually curated; PFAM: multicopper oxidase type 3; multicopper oxidase type 2 YP_004214403.1 KEGG: yen:YE0711 hypothetical protein YP_004214404.1 KEGG: spe:Spro_4001 spermidine synthase; TIGRFAM: spermidine synthase; PFAM: Spermine synthase YP_004214405.1 TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; KEGG: eca:ECA3334 S-adenosylmethionine decarboxylase; PFAM: S-adenosylmethionine decarboxylase related YP_004214406.1 KEGG: hha:Hhal_1884 hypothetical protein YP_004214407.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: yen:YE0707 hypothetical protein YP_004214408.1 PFAM: Uncharacterised conserved protein UCP006287; KEGG: spe:Spro_4007 hypothetical protein YP_004214409.1 KEGG: yen:YE0705 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; TIGRFAM: aconitate hydratase 2; PFAM: Aconitase B; aconitate hydratase domain-containing protein YP_004214410.1 KEGG: ppp:PHYPADRAFT_92527 hypothetical protein YP_004214411.1 PFAM: Fimbrial protein domain-containing protein; KEGG: esa:ESA_02541 hypothetical protein YP_004214412.1 PFAM: Fimbrial protein domain-containing protein; KEGG: kpu:KP1_0597 fimbrial protein YP_004214413.1 PFAM: extracellular solute-binding protein family 1; KEGG: ypy:YPK_2171 extracellular solute-binding protein YP_004214414.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yps:YPTB2014 ABC transporter permease subunit YP_004214415.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypb:YPTS_2073 binding-protein-dependent transport systems inner membrane component YP_004214416.1 KEGG: ypb:YPTS_2074 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004214417.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: ypb:YPTS_2075 glycerophosphoryl diester phosphodiesterase YP_004214418.1 PFAM: ROK family protein; KEGG: ypb:YPTS_2076 ROK family protein YP_004214419.1 KEGG: spe:Spro_4009 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_004214420.1 KEGG: eca:ECA3788 dihydrolipoamide acetyltransferase; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein YP_004214421.1 KEGG: spe:Spro_4011 pyruvate dehydrogenase subunit E1; TIGRFAM: 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; PFAM: Transketolase domain-containing protein YP_004214422.1 KEGG: spe:Spro_4012 transcriptional regulator PdhR; PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH YP_004214423.1 PFAM: amino acid permease-associated region; KEGG: eta:ETA_08120 aromatic amino acid transporter YP_004214424.1 KEGG: spe:Spro_4014 sugar (glycoside-pentoside-hexuronide) transporter; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1 YP_004214425.1 KEGG: eca:ECA3793 putatuve glycosysl hydrolase; PFAM: glycoside hydrolase family 43 YP_004214426.1 KEGG: spe:Spro_0780 regulatory protein AmpE YP_004214427.1 KEGG: esa:ESA_03229 N-acetyl-anhydromuranmyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2 YP_004214428.1 TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: spe:Spro_0779 quinolinate phosphoribosyltransferase; PFAM: Quinolinate phosphoribosyl transferase YP_004214429.1 KEGG: spe:Spro_0778 major pilin subunit YP_004214430.1 PFAM: type II secretion system protein E; KEGG: spe:Spro_0777 hypothetical protein YP_004214431.1 PFAM: Type II secretion system F domain; KEGG: spe:Spro_0776 type IV pilin biogenesis protein YP_004214432.1 KEGG: yen:YE0686 guanosine 5'-monophosphate oxidoreductase; TIGRFAM: guanosine monophosphate reductase; PFAM: IMP dehydrogenase/GMP reductase YP_004214433.1 TIGRFAM: dephospho-CoA kinase; KEGG: spe:Spro_0774 dephospho-CoA kinase; PFAM: Dephospho-CoA kinase YP_004214434.1 PFAM: protein of unknown function DUF1342; KEGG: spe:Spro_0773 hypothetical protein YP_004214435.1 PFAM: protein of unknown function DUF329; KEGG: yen:YE0683 zinc-binding protein YP_004214436.1 PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein YP_004214437.1 KEGG: spe:Spro_0771 nucleoside triphosphate pyrophosphohydrolase; TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase YP_004214438.1 KEGG: ypb:YPTS_0724 preprotein translocase subunit SecA; TIGRFAM: preprotein translocase SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; SEC-C motif domain protein YP_004214439.1 PFAM: secretion monitor family proten; KEGG: yen:YE0680 SecA regulator SecM YP_004214440.1 PFAM: protein of unknown function DUF721; KEGG: spe:Spro_0768 hypothetical protein YP_004214441.1 KEGG: efe:EFER_0118 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase YP_004214442.1 KEGG: pam:PANA_0724 FtsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain YP_004214443.1 KEGG: spe:Spro_0765 cell division protein FtsA; TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA YP_004214444.1 PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: spe:Spro_0764 cell division protein FtsQ YP_004214445.1 TIGRFAM: D-alanine/D-alanine ligase; KEGG: spe:Spro_0763 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein YP_004214446.1 KEGG: spe:Spro_0762 UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein YP_004214447.1 KEGG: eca:ECA3815 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain YP_004214448.1 KEGG: yen:YE0671 cell division protein FtsW; TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein YP_004214449.1 KEGG: spe:Spro_0759 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004214450.1 KEGG: spe:Spro_0758 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YP_004214451.1 KEGG: spe:Spro_0757 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004214452.1 KEGG: pct:PC1_3597 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004214453.1 KEGG: spe:Spro_0755 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_004214454.1 KEGG: pam:PANA_0712 FtsL; TIGRFAM: cell division protein FtsL; PFAM: cell division protein FtsL YP_004214455.1 KEGG: yen:YE0664 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase YP_004214456.1 KEGG: spe:Spro_0752 cell division protein MraZ; TIGRFAM: MraZ protein; PFAM: MraZ domain YP_004214457.1 TIGRFAM: D-fructose-responsive transcription factor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE0661 DNA-binding transcriptional regulator FruR; SMART: regulatory protein LacI YP_004214458.1 TIGRFAM: acetolactate synthase, small subunit; KEGG: spe:Spro_0749 acetolactate synthase 3 regulatory subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein YP_004214459.1 KEGG: spe:Spro_0748 acetolactate synthase 3 catalytic subunit; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein YP_004214460.1 PFAM: AMP-dependent synthetase and ligase; KEGG: etr:ETAE_0624 AMP-binding enzyme-family protein YP_004214461.1 PFAM: regulatory protein LysR; KEGG: hde:HDEF_1793 leucine transcriptional activator YP_004214462.1 KEGG: spe:Spro_0745 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein YP_004214463.1 TIGRFAM: 3-isopropylmalate dehydrogenase; KEGG: ypy:YPK_3536 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_004214464.1 KEGG: pct:PC1_3609 isopropylmalate isomerase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain-containing protein YP_004214465.1 KEGG: spe:Spro_0742 isopropylmalate isomerase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain-containing protein YP_004214466.1 KEGG: dmo:Dmoj_GI20120 GI20120 gene product from transcript GI20120-RA YP_004214467.1 PFAM: major facilitator superfamily MFS_1; KEGG: ebi:EbC_07030 sugar efflux transporter YP_004214468.1 KEGG: spe:Spro_0739 hypothetical protein YP_004214469.1 PFAM: extracellular solute-binding protein family 5; KEGG: spe:Spro_0738 transcriptional regulator SgrR YP_004214470.1 KEGG: pam:PANA_0694 TbpA; TIGRFAM: thiamine ABC transporter periplasmic binding protein; ABC transporter periplasmic binding protein, thiB subfamily; PFAM: extracellular solute-binding protein family 1 YP_004214471.1 KEGG: spe:Spro_0736 thiamine transporter membrane protein; TIGRFAM: thiamine ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004214472.1 TIGRFAM: ABC transporter ATPase; PFAM: ABC transporter related; KEGG: yen:YE0640 thiamine transporter ATP-binding subunit; SMART: AAA ATPase YP_004214473.1 PFAM: SNARE associated Golgi protein; KEGG: yen:YE0639 DedA family membrane protein YP_004214474.1 KEGG: yen:YE0637 DNA polymerase II; PFAM: DNA polymerase B region; DNA polymerase B exonuclease; SMART: DNA-directed DNA polymerase B YP_004214475.1 KEGG: yen:YE0636 ATP-dependent helicase HepA; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004214476.1 PFAM: pseudouridine synthase; KEGG: pct:PC1_3630 pseudouridine synthase YP_004214477.1 TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; KEGG: ebi:EbC_39640 IgA1 protease precursor; PFAM: peptidase S6 IgA endopeptidase; Autotransporter beta- domain protein YP_004214478.1 KEGG: eta:ETA_07280 Dna-J like membrane chaperone protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_004214479.1 KEGG: yen:YE0633 organic solvent tolerance protein; manually curated; PFAM: Organic solvent tolerance protein; OstA family protein YP_004214480.1 PFAM: SurA domain; PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: spe:Spro_0726 peptidyl-prolyl cis-trans isomerase SurA YP_004214481.1 TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: ypb:YPTS_0657 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA YP_004214482.1 TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: spe:Spro_0724 dimethyladenosine transferase; SMART: Ribosomal RNA adenine methylase transferase-like YP_004214483.1 PFAM: ApaG domain protein; KEGG: spe:Spro_0723 ApaG protein YP_004214484.1 KEGG: yen:YE0628 diadenosine tetraphosphatase; TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical); PFAM: metallophosphoesterase YP_004214485.1 KEGG: ddc:Dd586_3577 dihydrofolate reductase; PFAM: dihydrofolate reductase region YP_004214486.1 KEGG: ypb:YPTS_0651 hypothetical protein YP_004214487.1 PFAM: protein of unknown function DUF1212; KEGG: ypb:YPTS_0650 hypothetical protein YP_004214488.1 PFAM: lysine exporter protein (LYSE/YGGA); KEGG: spe:Spro_0717 lysine exporter protein LysE/YggA YP_004214489.1 KEGG: spe:Spro_0716 glutathione-regulated potassium-efflux system protein KefC; TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein YP_004214490.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: spe:Spro_0715 glutathione-regulated potassium-efflux system ancillary protein KefF YP_004214491.1 KEGG: she:Shewmr4_2805 glycosyl hydrolase family chitinase; PFAM: glycoside hydrolase family 18; Chitinase A domain protein; PKD domain containing protein; Carbohydrate-binding family V/XII; SMART: chitinase II; PKD domain containing protein; Carbohydrate-binding family V/XII YP_004214492.1 KEGG: yen:YE0622 carbamoyl phosphate synthase large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein YP_004214493.1 KEGG: spe:Spro_0713 carbamoyl phosphate synthase small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I YP_004214494.1 TIGRFAM: dihydrodipicolinate reductase; KEGG: pct:PC1_3649 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase YP_004214495.1 KEGG: ebi:EbC_38880 outer membrane protein YP_004214496.1 PFAM: SMP-30/gluconolaconase/LRE-like region-containing protein; KEGG: ctu:Ctu_06610 hypothetical protein YP_004214497.1 TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: spe:Spro_0701 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PFAM: LytB protein YP_004214498.1 KEGG: spe:Spro_0700 peptidylprolyl isomerase FKBP-type; PFAM: peptidylprolyl isomerase FKBP-type YP_004214499.1 TIGRFAM: lipoprotein signal peptidase; KEGG: spe:Spro_0699 lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II YP_004214500.1 KEGG: ypb:YPTS_0641 isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase YP_004214501.1 TIGRFAM: riboflavin biosynthesis protein RibF; KEGG: spe:Spro_0697 bifunctional riboflavin kinase/FMN adenylyltransferase; PFAM: FAD synthetase; Riboflavin kinase YP_004214502.1 KEGG: ypb:YPTS_0639 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20 YP_004214503.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: spe:Spro_0695 transcriptional activator NhaR YP_004214504.1 KEGG: yen:YE0611 pH-dependent sodium/proton antiporter; TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA YP_004214505.1 TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; DnaJ central domain protein; heat shock protein DnaJ domain protein; KEGG: kva:Kvar_4379 chaperone protein DnaJ; SMART: heat shock protein DnaJ domain protein YP_004214506.1 TIGRFAM: chaperone protein DnaK; KEGG: ypi:YpsIP31758_3466 molecular chaperone DnaK; PFAM: Heat shock protein 70 YP_004214507.1 PFAM: GPR1/FUN34/yaaH family protein; KEGG: dda:Dd703_0580 hypothetical protein YP_004214508.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_0690 major facilitator transporter YP_004214509.1 KEGG: esa:ESA_03329 molybdenum cofactor biosynthesis protein MogA; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain YP_004214510.1 KEGG: yen:YE0604 transaldolase B; TIGRFAM: transaldolase; PFAM: Transaldolase YP_004214511.1 KEGG: spe:Spro_0687 amino acid carrier protein; TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter YP_004214512.1 PFAM: protein of unknown function DUF328; KEGG: spe:Spro_0686 hypothetical protein YP_004214513.1 TIGRFAM: threonine synthase; KEGG: ypb:YPTS_0628 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein subunit beta YP_004214514.1 KEGG: spe:Spro_0684 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein YP_004214515.1 KEGG: spe:Spro_0683 bifunctional aspartokinase I/homoserine dehydrogenase I; TIGRFAM: aspartate kinase; PFAM: homoserine dehydrogenase; aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding YP_004214516.1 KEGG: spe:Spro_0682 RNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU) YP_004214517.1 KEGG: spe:Spro_0681 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004214518.1 PFAM: CreA family protein; KEGG: spe:Spro_0680 hypothetical protein YP_004214519.1 KEGG: spe:Spro_0679 AraC family transcriptional regulator; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004214520.1 PFAM: Phosphoglycerate mutase; KEGG: spe:Spro_0678 phosphoglycerate mutase YP_004214521.1 PFAM: protein of unknown function DUF84; KEGG: pwa:Pecwa_3869 NTPase YP_004214522.1 KEGG: spe:Spro_0676 Trp operon repressor; TIGRFAM: trp operon repressor; PFAM: Trp repressor YP_004214523.1 PFAM: lytic transglycosylase catalytic; KEGG: spe:Spro_0675 lytic murein transglycosylase YP_004214524.1 KEGG: ypb:YPTS_0616 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase YP_004214525.1 KEGG: spe:Spro_3050 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_004214526.1 KEGG: ebi:EbC_06190 ATP-binding component of a transport system; PFAM: ABC transporter related; SMART: AAA ATPase YP_004214527.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA3903 LysR family transcriptional activator YP_004214528.1 KEGG: spe:Spro_0669 zinc-binding alcohol dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein YP_004214529.1 KEGG: cko:CKO_03255 hypothetical protein YP_004214530.1 KEGG: spq:SPAB_00196 hypothetical protein YP_004214531.1 TIGRFAM: nicotinamide-nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: helix-turn-helix domain protein; KEGG: ypi:YpsIP31758_3491 nicotinamide-nucleotide adenylyltransferase; SMART: helix-turn-helix domain protein YP_004214532.1 KEGG: eta:ETA_06730 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: AAA ATPase YP_004214533.1 TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: spe:Spro_0666 phosphoserine phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004214534.1 PFAM: Virulence factor, haemolysin regulator; KEGG: yps:YPTB0585 hypothetical protein YP_004214535.1 PFAM: HipA domain protein; KEGG: spe:Spro_0664 hypothetical protein YP_004214536.1 KEGG: ctu:Ctu_05990 purine nucleoside phosphorylase DeoD-type; TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1 YP_004214537.1 TIGRFAM: phosphopentomutase; KEGG: ctu:Ctu_05980 phosphopentomutase; PFAM: metalloenzyme domain protein YP_004214538.1 TIGRFAM: thymidine phosphorylase; pyrimidine-nucleoside phosphorylase; KEGG: spe:Spro_0661 thymidine phosphorylase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; Pyrimidine nucleoside phosphorylase domain YP_004214539.1 TIGRFAM: deoxyribose-phosphate aldolase; KEGG: spe:Spro_0660 deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_004214540.1 KEGG: ptm:GSPATT00019616001 hypothetical protein YP_004214541.1 PFAM: TatD-related deoxyribonuclease; KEGG: spe:Spro_0657 TatD-related deoxyribonuclease YP_004214542.1 PFAM: Patatin; KEGG: yen:YE0567 hypothetical protein YP_004214543.1 PFAM: protein of unknown function DUF1328; KEGG: ypb:YPTS_0599 hypothetical protein YP_004214544.1 KEGG: spe:Spro_0653 periplasmic protein; PFAM: transport-associated; SMART: Transport-associated and nodulation region YP_004214545.1 PFAM: Carbohydrate-binding family V/XII; PKD domain containing protein; KEGG: cro:ROD_44811 polysaccharide degrading enzyme; SMART: Carbohydrate-binding family V/XII; PKD domain containing protein YP_004214546.1 KEGG: spe:Spro_0652 peptide chain release factor 3; TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_004214547.1 KEGG: sbn:Sbal195_3381 HipA domain-containing protein; TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein YP_004214548.1 KEGG: sbn:Sbal195_3478 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004214549.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; KEGG: yen:YE0563 ribosomal-protein-alanine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_004214550.1 PFAM: DNA polymerase III psi subunit; KEGG: ypb:YPTS_0595 DNA polymerase III subunit psi YP_004214551.1 KEGG: yen:YE0561 16S ribosomal RNA m2G1207 methyltransferase; PFAM: methyltransferase small; methyltransferase small domain protein YP_004214552.1 PFAM: aldo/keto reductase; KEGG: eca:ECA0736 aldo/keto reductase YP_004214553.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_0647 LysR family transcriptional regulator YP_004214554.1 PFAM: protein of unknown function DUF1435; KEGG: spe:Spro_0646 hypothetical protein YP_004214555.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: yen:YE0557 HmsT protein; SMART: GGDEF domain containing protein YP_004214556.1 PFAM: RhaT l-rhamnose-proton symport 2; KEGG: eca:ECA0450 rhamnose-proton symporter YP_004214557.1 KEGG: ddc:Dd586_0467 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004214558.1 KEGG: pwa:Pecwa_0500 transcriptional activator RhaS; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004214559.1 KEGG: eca:ECA0440 rhamnulokinase; TIGRFAM: rhamnulokinase; PFAM: Carbohydrate kinase, FGGY-like YP_004214560.1 TIGRFAM: L-rhamnose isomerase; KEGG: ses:SARI_03601 L-rhamnose isomerase; PFAM: L-rhamnose isomerase YP_004214561.1 TIGRFAM: rhamnulose-1-phosphate aldolase; KEGG: pwa:Pecwa_0497 rhamnulose-1-phosphate aldolase; PFAM: class II aldolase/adducin family protein YP_004214562.1 KEGG: enc:ECL_05075 lactaldehyde reductase; TIGRFAM: lactaldehyde reductase; PFAM: iron-containing alcohol dehydrogenase YP_004214563.1 KEGG: pwa:Pecwa_0496 L-rhamnose 1-epimerase; TIGRFAM: L-rhamnose 1-epimerase; PFAM: protein of unknown function DUF718 YP_004214564.1 KEGG: spe:Spro_4234 hypothetical protein; PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004214565.1 KEGG: rso:RS02138 hypothetical protein YP_004214566.1 TIGRFAM: dihydroxyacetone kinase; KEGG: ebi:EbC_03690 dihydroxyacetone kinase; PFAM: Dak kinase; Dak phosphatase YP_004214567.1 TIGRFAM: L-serine dehydratase 1; KEGG: spe:Spro_1629 L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain YP_004214568.1 TIGRFAM: serine transporter; KEGG: yen:YE1473 serine transporter YP_004214569.1 KEGG: spe:Spro_0674 hypothetical protein YP_004214570.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: spe:Spro_0673 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004214571.1 PFAM: OmpA/MotB domain protein; KEGG: spe:Spro_0672 OmpA/MotB domain-containing protein YP_004214572.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: yen:YE4015 transcriptional regulator YP_004214573.1 TIGRFAM: alpha-acetolactate decarboxylase; KEGG: yen:YE4016 alpha-acetolactate decarboxylase; PFAM: alpha-acetolactate decarboxylase YP_004214574.1 KEGG: eta:ETA_00120 acetolactate synthase; TIGRFAM: acetolactate synthase, catabolic; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein YP_004214575.1 PFAM: ATPase associated with various cellular activities AAA_5; KEGG: sml:Smlt0496 hypothetical protein YP_004214576.1 PFAM: 5-methylcytosine restriction system component-like protein; KEGG: ppf:Pput_4619 McrBC 5-methylcytosine restriction system component-like protein YP_004214577.1 KEGG: ddd:Dda3937_00946 prophage protein YP_004214578.1 KEGG: spe:Spro_3398 outer membrane protein YP_004214579.1 KEGG: pwa:Pecwa_0482 hypothetical protein YP_004214580.1 KEGG: esa:ESA_02127 hypothetical protein YP_004214581.1 PFAM: beta-lactamase; KEGG: yen:YE1402 beta-lactam binding protein AmpH YP_004214582.1 PFAM: permease YjgP/YjgQ family protein; KEGG: spe:Spro_0564 permease YjgP/YjgQ family protein YP_004214583.1 PFAM: permease YjgP/YjgQ family protein; KEGG: sgl:SG2108 transport protein YP_004214584.1 KEGG: spe:Spro_0562 leucyl aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein YP_004214585.1 KEGG: spe:Spro_0561 DNA polymerase III subunit chi; PFAM: DNA polymerase III chi subunit HolC YP_004214586.1 KEGG: yen:YE0498 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase YP_004214587.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cko:CKO_02556 hypothetical protein YP_004214588.1 PFAM: Fimbrial protein domain-containing protein; KEGG: kpu:KP1_0601 fimbrial adhesin precursor YP_004214589.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: kpu:KP1_0600 long polar fimbrial outer membrane usher protein YP_004214590.1 PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: yen:YE1113 fimbrial chaperone protein YP_004214591.1 PFAM: Fimbrial protein domain-containing protein; KEGG: kpu:KP1_0597 fimbrial protein YP_004214592.1 PFAM: Fimbrial protein domain-containing protein; KEGG: pay:PAU_02406 fimbrial subunit type 1 YP_004214593.1 PFAM: peptidase M48 Ste24p; KEGG: pct:PC1_0378 peptidase M48 Ste24p YP_004214594.1 PFAM: protein of unknown function DUF898 transmembrane; KEGG: eca:ECA0387 hypothetical protein YP_004214595.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ypy:YPK_3682 GCN5-related N-acetyltransferase YP_004214596.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: yen:YE1415 LacI family regulatory protein YP_004214597.1 KEGG: yen:YE1416 PTS-system permease; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_004214598.1 PFAM: glycoside hydrolase family 1; KEGG: yen:YE1417 6-phospho-beta-glucosidase YP_004214599.1 PFAM: protein of unknown function DUF1260; KEGG: pwa:Pecwa_0426 hypothetical protein YP_004214600.1 KEGG: pct:PC1_0374 ornithine carbamoyltransferase subunit I; TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain YP_004214601.1 KEGG: vvy:VVA1393 sucrose phosphorylase related protein; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_004214602.1 PFAM: Conserved hypothetical protein CHP00022; KEGG: dze:Dd1591_3734 hypothetical protein YP_004214603.1 TIGRFAM: arginine deiminase; KEGG: ctu:Ctu_04920 arginine deiminase; PFAM: amidinotransferase YP_004214604.1 TIGRFAM: carbamate kinase; KEGG: enc:ECL_00670 carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_004214605.1 TIGRFAM: ornithine carbamoyltransferase; KEGG: ctu:Ctu_04900 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain YP_004214606.1 PFAM: C4-dicarboxylate anaerobic carrier-like; KEGG: aha:AHA_4090 transporter YP_004214607.1 PFAM: Arginine repressor-like; KEGG: ddc:Dd586_0384 arginine repressor, ArgR YP_004214609.1 KEGG: spe:Spro_0545 aspartate carbamoyltransferase catalytic subunit; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_004214610.1 KEGG: sew:SeSA_A4712 aspartate carbamoyltransferase regulatory subunit; TIGRFAM: aspartate carbamoyltransferase, regulatory subunit; PFAM: Aspartate carbamoyltransferase regulatory subunit-like YP_004214611.1 KEGG: yen:YE3768 hypothetical protein; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP YP_004214612.1 KEGG: tet:TTHERM_01553980 hypothetical protein YP_004214613.1 KEGG: cce:Ccel_0802 peptidase S16, lon-like protein YP_004214616.1 KEGG: pap:PSPA7_1429 chemotaxis transducer YP_004214617.1 KEGG: phu:Phum_PHUM169820 multidrug resistance protein YP_004214618.1 KEGG: ses:SARI_02598 hypothetical protein YP_004214619.1 KEGG: ses:SARI_02603 hypothetical protein; TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; PFAM: Protein of unknown function DUF2345 YP_004214621.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: yen:YE3769 hypothetical protein YP_004214622.1 PFAM: protein of unknown function DUF403; KEGG: spe:Spro_0539 hypothetical protein YP_004214623.1 KEGG: spe:Spro_0538 transglutaminase domain-containing protein; PFAM: transglutaminase domain protein; transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein YP_004214624.1 PFAM: 20S proteasome A and B subunits; KEGG: yen:YE3772 hypothetical protein YP_004214625.1 KEGG: enc:ECL_01791 LacI family transcription regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_004214626.1 PFAM: Outer membrane protein G; KEGG: ses:SARI_03140 hypothetical protein YP_004214627.1 KEGG: ctu:Ctu_23070 uncharacterized ABC transporter ATP-binding protein YcjV; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004214628.1 KEGG: ctu:Ctu_23080 beta-phosphoglucomutase; TIGRFAM: beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004214629.1 PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: cro:ROD_16931 glycosyl hydrolase YP_004214630.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ses:SARI_01290 hypothetical protein YP_004214631.1 PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: enc:ECL_01785 xylose isomerase domain-containing protein YP_004214632.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: ecg:E2348C_1505 predicted oxidoreductase, Zn-dependent and NAD(P)-binding YP_004214633.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ent:Ent638_2162 binding-protein-dependent transport systems inner membrane component YP_004214634.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: enc:ECL_01782 multiple sugar transport system permease protein YP_004214635.1 PFAM: extracellular solute-binding protein family 1; KEGG: cro:ROD_16991 ABC transporter periplasmic binding protein YP_004214636.1 KEGG: ebi:EbC_42080 sucrose phosphorylase; PFAM: alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain YP_004214637.1 KEGG: pct:PC1_0532 hypothetical protein YP_004214638.1 KEGG: ddc:Dd586_0557 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein YP_004214639.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: yen:YE3707 altronate oxidoreductase YP_004214640.1 KEGG: yen:YE3708 glucuronate isomerase; PFAM: glucuronate isomerase YP_004214641.1 KEGG: spe:Spro_4322 D-galactonate transporter; TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1 YP_004214642.1 KEGG: yen:YE3710 DNA-binding transcriptional repressor ExuR; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004214643.1 PFAM: SNARE associated Golgi protein; KEGG: spe:Spro_4325 SNARE associated golgi protein YP_004214644.1 KEGG: spe:Spro_4326 hypothetical protein YP_004214645.1 PFAM: protein of unknown function DUF1090; KEGG: spe:Spro_4327 hypothetical protein YP_004214646.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: yen:YE3715 hypothetical protein YP_004214647.1 KEGG: yen:YE3716 hypothetical protein YP_004214648.1 KEGG: yen:YE3717 hypothetical protein YP_004214649.1 PFAM: DoxX family protein; KEGG: eay:EAM_0490 membrane protein YP_004214650.1 KEGG: spe:Spro_4332 hypothetical protein; PFAM: Glutathione S-transferase domain YP_004214651.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_4333 LysR family transcriptional regulator YP_004214652.1 PFAM: Pirin domain protein; KEGG: spe:Spro_4334 pirin domain-containing protein YP_004214653.1 PFAM: Toxin-coregulated pilus subunit TcpA; KEGG: cro:ROD_46461 type IV pilin YP_004214654.1 KEGG: cro:ROD_46471 type IV pilus biogenesis protein YP_004214655.1 KEGG: cro:ROD_46481 type IV pilus biogenesis protein YP_004214656.1 PFAM: type II and III secretion system protein; KEGG: cro:ROD_46491 type IV pilus biogenesis protein YP_004214657.1 KEGG: cro:ROD_46501 type IV pilus biogenesis protein YP_004214658.1 KEGG: cro:ROD_46511 type IV pilus biogenesis protein YP_004214659.1 KEGG: cro:ROD_46521 type IV pilus biogenesis protein YP_004214660.1 PFAM: type II secretion system protein E; KEGG: cro:ROD_46531 type IV pilus biogenesis protein CfcH YP_004214661.1 PFAM: Type II secretion system F domain; KEGG: cro:ROD_46541 type IV pilus biogenesis protein YP_004214662.1 KEGG: clu:CLUG_00489 hypothetical protein YP_004214663.1 KEGG: cro:ROD_46561 prepillin peptidase CfcP; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV YP_004214664.1 PFAM: Peptidase M23; KEGG: cro:ROD_46571 prepillin peptidase YP_004214665.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: yen:YE3726 tetrapyrrole methylase YP_004214666.1 KEGG: spe:Spro_4336 LppC family lipoprotein YP_004214667.1 PFAM: Uncharacterised protein family UPF0102; KEGG: spe:Spro_4337 hypothetical protein YP_004214668.1 PFAM: sugar isomerase (SIS); KEGG: enc:ECL_04531 DnaA initiator-associating protein DiaA YP_004214669.1 KEGG: spe:Spro_4339 hypothetical protein; PFAM: transport-associated; SMART: Transport-associated and nodulation region YP_004214670.1 KEGG: ebi:EbC_40430 monofunctional biosynthetic peptidoglycan transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51 YP_004214671.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; response regulator receiver; Hpt domain protein; KEGG: spe:Spro_4342 aerobic respiration control sensor protein ArcB; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver; Hpt domain protein YP_004214672.1 KEGG: ypb:YPTS_3687 glutamate synthase subunit alpha; PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase subunit alpha domain protein YP_004214673.1 KEGG: dda:Dd703_3634 glutamate synthase subunit beta; TIGRFAM: glutamate synthase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004214674.1 PFAM: Stringent starvation protein B; KEGG: spe:Spro_4346 ClpXP protease specificity-enhancing factor YP_004214675.1 PFAM: Glutathione S-transferase domain; KEGG: epy:EpC_03140 stringent starvation protein A YP_004214676.1 PFAM: ribosomal protein S9; KEGG: eca:ECA0307 30S ribosomal protein S9 YP_004214677.1 KEGG: pam:PANA_0413 RplM; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13 YP_004214678.1 KEGG: fno:Fnod_0984 DNA-directed DNA polymerase YP_004214679.1 PFAM: AFG1-family ATPase; KEGG: spe:Spro_4350 AFG1 family ATPase YP_004214680.1 PFAM: protein of unknown function DUF1043; KEGG: pwa:Pecwa_0297 cytochrome d ubiquinol oxidase subunit III YP_004214681.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: spe:Spro_4352 protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_004214682.1 TIGRFAM: periplasmic serine protease DegS; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: esa:ESA_03621 serine endoprotease; SMART: PDZ/DHR/GLGF domain protein YP_004214683.1 KEGG: spe:Spro_4354 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_004214684.1 PFAM: BolA family protein; KEGG: spe:Spro_4355 BolA family protein YP_004214685.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: spe:Spro_4356 anti-sigma-factor antagonist YP_004214686.1 PFAM: toluene tolerance family protein; KEGG: ebi:EbC_40280 toluene tolerance ABC transporter auxiliary subunit YP_004214687.1 PFAM: Mammalian cell entry related domain protein; KEGG: ebi:EbC_40290 toluene tolerance ABC transporter periplasmic subunit YP_004214688.1 PFAM: protein of unknown function DUF140; KEGG: ypb:YPTS_3704 hypothetical protein YP_004214689.1 KEGG: yen:YE3752 ABC transporter ATP-binding protein YrbF; PFAM: ABC transporter related; SMART: AAA ATPase YP_004214690.1 KEGG: spe:Spro_4361 calcium/sodium:proton antiporter; TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region YP_004214691.1 TIGRFAM: KpsF/GutQ family protein; KEGG: ebi:EbC_40330 D-arabinose 5-phosphate isomerase; PFAM: sugar isomerase (SIS); CBS domain containing protein YP_004214692.1 TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: spe:Spro_4363 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_004214693.1 PFAM: protein of unknown function DUF1239; KEGG: spe:Spro_4364 hypothetical protein YP_004214694.1 KEGG: yen:YE3757 lipopolysaccharide transport periplasmic protein LptA; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein YP_004214695.1 KEGG: sgl:SG0200 ABC transporter ATP-binding protein YhbG; PFAM: ABC transporter related; SMART: AAA ATPase YP_004214696.1 KEGG: spe:Spro_4367 RNA polymerase factor sigma-54; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor YP_004214697.1 KEGG: spe:Spro_4368 sigma(54) modulation protein; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA YP_004214698.1 KEGG: sgl:SG0197 PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN; TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 YP_004214699.1 KEGG: spe:Spro_4370 hypothetical protein YP_004214700.1 KEGG: yen:YE3763 phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr); TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_004214701.1 KEGG: yen:YE3777 transcriptional regulator; PFAM: PRD domain protein; M trans-acting positive regulator; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 YP_004214702.1 PFAM: protein of unknown function DUF1341; KEGG: spe:Spro_4374 hypothetical protein YP_004214703.1 KEGG: spe:Spro_4375 pyridoxal phosphate-dependent enzyme; TIGRFAM: pyridoxal phosphate-dependent enzyme; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase YP_004214704.1 PFAM: amidohydrolase; KEGG: yen:YE3781 dihydroorotase YP_004214705.1 KEGG: spe:Spro_4377 inner membrane protein YP_004214706.1 KEGG: ebi:EbC_04880 inner membrane protein YP_004214707.1 KEGG: spe:Spro_4379 hypothetical protein YP_004214708.1 KEGG: cko:CKO_03590 hypothetical protein YP_004214709.1 KEGG: yen:YE3786 hypothetical protein; manually curated; PFAM: PRD domain protein YP_004214710.1 KEGG: spe:Spro_4382 nucleoside diphosphate kinase regulator YP_004214712.1 PFAM: cytochrome b562; KEGG: spe:Spro_4383 cytochrome b562 YP_004214713.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: ypb:YPTS_3727 peptidase PmbA YP_004214714.1 PFAM: protein of unknown function DUF615; KEGG: spe:Spro_4387 hypothetical protein YP_004214715.1 PFAM: Barstar (barnase inhibitor); KEGG: yen:YE3791 ribonuclease inhibitor YP_004214716.1 PFAM: guanine-specific ribonuclease N1 and T1; KEGG: spe:Spro_4389 guanine-specific ribonuclease N1 and T1 YP_004214717.1 KEGG: yen:YE3793 succinate-semialdehyde dehydrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_004214718.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: ses:SARI_02830 galactoside O-acetyltransferase YP_004214719.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: spe:Spro_4390 p-hydroxybenzoic acid efflux subunit AaeB YP_004214720.1 KEGG: spe:Spro_4391 p-hydroxybenzoic acid efflux subunit AaeA; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004214721.1 PFAM: protein of unknown function DUF1656; KEGG: spe:Spro_4392 hypothetical protein YP_004214722.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_4393 DNA-binding transcriptional regulator YP_004214723.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: spe:Spro_4404 protease TldD YP_004214724.1 KEGG: spe:Spro_4406 hypothetical protein YP_004214725.1 KEGG: ddc:Dd586_0269 ribonuclease, Rne/Rng family; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein YP_004214726.1 KEGG: yen:YE3802 Maf-like protein; TIGRFAM: maf protein; PFAM: Maf family protein YP_004214727.1 KEGG: ebi:EbC_40710 rod shape-determining protein; TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD YP_004214728.1 KEGG: spe:Spro_4410 rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC YP_004214729.1 KEGG: spe:Spro_4411 rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl YP_004214730.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: spe:Spro_4412 regulatory protein CsrD; SMART: EAL domain protein; GGDEF domain containing protein YP_004214731.1 PFAM: oxidoreductase molybdopterin binding; KEGG: spe:Spro_4414 sulfite oxidase subunit YedY YP_004214732.1 PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: yen:YE3809 sulfite oxidase subunit YedZ YP_004214733.1 TIGRFAM: 3-dehydroquinate dehydratase, type II; KEGG: spe:Spro_4416 3-dehydroquinate dehydratase; PFAM: dehydroquinase class II YP_004214734.1 KEGG: spe:Spro_4417 acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein YP_004214735.1 KEGG: spe:Spro_4418 acetyl-CoA carboxylase biotin carboxylase subunit; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein YP_004214736.1 PFAM: protein of unknown function DUF997; KEGG: ebi:EbC_40800 inner membrane protein YP_004214737.1 KEGG: spe:Spro_4420 sodium/panthothenate symporter; TIGRFAM: sodium/pantothenate symporter; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter YP_004214738.1 KEGG: yen:YE3815 ribosomal protein L11 methyltransferase; TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase YP_004214739.1 KEGG: pwa:Pecwa_0242 carbonic anhydrase; PFAM: carbonic anhydrase YP_004214740.1 KEGG: spe:Spro_4423 tRNA-dihydrouridine synthase B; TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS YP_004214741.1 PFAM: helix-turn-helix Fis-type; KEGG: etr:ETAE_3152 DNA-binding protein fis YP_004214742.1 PFAM: DoxX family protein; KEGG: dze:Dd1591_1247 DoxX family protein YP_004214743.1 KEGG: yen:YE3829 lipid A biosynthesis palmitoleoyl acyltransferase; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: lipid A biosynthesis acyltransferase YP_004214744.1 KEGG: pst:PSPTOA0058 hypothetical protein YP_004214745.1 KEGG: yen:YE3833 ABC transporter periplasmic solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004214746.1 KEGG: yen:YE3834 ABC transporter permease; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004214747.1 KEGG: yen:YE3835 ABC transporter permease; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004214748.1 KEGG: yen:YE3836 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004214749.1 PFAM: LrgB family protein; KEGG: spe:Spro_4427 LrgB family protein YP_004214750.1 PFAM: LrgA family protein; KEGG: spe:Spro_4428 LrgA family protein YP_004214751.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: yen:YE3838 LysR family transcriptional regulator YP_004214752.1 KEGG: spe:Spro_4430 Na+/H+ antiporter; TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger YP_004214753.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: spe:Spro_4431 xanthine/uracil/vitamin C permease YP_004214754.1 PFAM: Glutathione S-transferase domain; KEGG: yen:YE3841 glutathione S transferase YP_004214755.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; MHYT domain protein; KEGG: ebi:EbC_38160 diguanylate cyclase (GGDEF domain); SMART: EAL domain protein; GGDEF domain containing protein YP_004214756.1 KEGG: ddd:Dda3937_02872 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer YP_004214757.1 PFAM: inositol monophosphatase; KEGG: atu:Atu4573 inositol monophosphatase family protein YP_004214758.1 PFAM: lysine exporter protein (LYSE/YGGA); KEGG: ppg:PputGB1_2255 lysine exporter protein LysE/YggA YP_004214759.1 PFAM: periplasmic binding protein; KEGG: ebi:EbC_34640 ABC transporter solute-binding protein YP_004214760.1 KEGG: ebi:EbC_34650 molybdenum ABC transporter periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_004214761.1 KEGG: ebi:EbC_34320 kinase; PFAM: RIO-like kinase; SMART: protein of unknown function RIO1 YP_004214762.1 PFAM: Male sterility domain; KEGG: ctu:Ctu_33390 hypothetical protein YP_004214763.1 PFAM: Glutathione S-transferase domain; KEGG: enc:ECL_02211 glutathione S-transferase domain protein YP_004214764.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mxa:MXAN_5306 acetyltransferase YP_004214765.1 KEGG: yen:YE1743 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004214766.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: yen:YE1742 inner membrane protein YP_004214767.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: msl:Msil_3211 4-oxalocrotonate tautomerase YP_004214768.1 PFAM: PemK family protein; KEGG: aat:D11S_0906 transcriptional modulator of MazE/toxin, MazF YP_004214769.1 KEGG: yen:YE1273 hypothetical protein YP_004214770.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: spe:Spro_3727 short-chain dehydrogenase/reductase SDR YP_004214771.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3728 LysR family transcriptional regulator YP_004214772.1 KEGG: pct:PC1_1536 hypothetical protein YP_004214773.1 KEGG: mms:mma_1885 hypothetical protein YP_004214774.1 PFAM: FAD dependent oxidoreductase; KEGG: spe:Spro_2318 monooxygenase FAD-binding YP_004214775.1 PFAM: metallophosphoesterase; KEGG: cro:ROD_32251 hypothetical protein YP_004214776.1 TIGRFAM: cysteine protease domain protein, YopT-type; KEGG: hsm:HSM_1489 cysteine protease domain-containing protein YP_004214777.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: spe:Spro_0105 LysR family transcriptional regulator YP_004214778.1 PFAM: Amidohydrolase 3; KEGG: ebi:EbC_35430 amidohydrolase 3 YP_004214779.1 KEGG: spe:Spro_4439 single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n YP_004214780.1 KEGG: spe:Spro_4440 excinuclease ABC subunit A; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related YP_004214781.1 KEGG: gca:Galf_0377 hypothetical protein YP_004214782.1 KEGG: vap:Vapar_2240 hypothetical protein YP_004214783.1 PFAM: glycoside hydrolase family 13 domain protein; esterase; KEGG: dze:Dd1591_1707 esterase YP_004214784.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3091 LysR family transcriptional regulator YP_004214785.1 PFAM: Glutathione S-transferase domain; KEGG: spe:Spro_3092 glutathione S-transferase domain-containing protein YP_004214786.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: spe:Spro_3093 pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_004214787.1 KEGG: spe:Spro_4443 hypothetical protein YP_004214788.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: enc:ECL_05108 glycoside/pentoside/hexuronide:cation symporter YP_004214789.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: cko:CKO_03136 hypothetical protein YP_004214790.1 PFAM: glycoside hydrolase family 31; KEGG: sed:SeD_A4407 alpha-glucosidase YP_004214791.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: cko:CKO_03133 hypothetical protein YP_004214792.1 PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: ect:ECIAI39_3119 aldolase YP_004214793.1 KEGG: cro:ROD_38791 phosphogluconate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_004214794.1 PFAM: PfkB domain protein; KEGG: cro:ROD_38781 sugar kinase YP_004214795.1 KEGG: cko:CKO_03129 hypothetical protein; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004214796.1 PFAM: aminotransferase class I and II; KEGG: dze:Dd1591_0702 aromatic amino acid aminotransferase YP_004214797.1 KEGG: pag:PLES_01831 3-ketoacyl-(acyl-carrier-protein) reductase YP_004214798.1 PFAM: protein of unknown function DUF161; KEGG: eca:ECA3669 hypothetical protein YP_004214799.1 KEGG: eca:ECA3668 transcription regulator AsnC; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004214800.1 PFAM: extracellular solute-binding protein family 3; KEGG: spe:Spro_4447 arogenate dehydratase; SMART: extracellular solute-binding protein family 3 YP_004214801.1 TIGRFAM: alanine racemase; KEGG: spe:Spro_4448 alanine racemase; PFAM: alanine racemase domain protein YP_004214802.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: ypi:YpsIP31758_3765 replicative DNA helicase; SMART: AAA ATPase YP_004214803.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: spe:Spro_4450 quinone oxidoreductase, NADPH-dependent YP_004214804.1 KEGG: ecz:ECS88_4522 phage shock protein G; TIGRFAM: phage shock protein G; PFAM: shock protein G YP_004214805.1 KEGG: epy:EpC_33170 tRNA-dihydrouridine synthase A; TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS YP_004214806.1 PFAM: ferric-uptake regulator; KEGG: yen:YE3853 zinc uptake transcriptional repressor YP_004214807.1 PFAM: CsbD family protein; KEGG: sdy:SDY_4529 stress-response protein YP_004214808.1 KEGG: spe:Spro_4459 DNA-damage-inducible SOS response protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_004214809.1 KEGG: yen:YE3855 LexA repressor; TIGRFAM: LexA repressor; PFAM: LexA DNA-binding domain protein; Peptidase S24/S26A/S26B, conserved region YP_004214810.1 PFAM: diacylglycerol kinase; KEGG: ctu:Ctu_37730 diacylglycerol kinase YP_004214811.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: spe:Spro_4462 glycerol-3-phosphate acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_004214812.1 KEGG: ebi:EbC_03050 4-hydroxybenzoate octaprenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase YP_004214813.1 KEGG: xbo:XBJ1_4001 chorismate pyruvate lyase; PFAM: Chorismate lyase YP_004214814.1 PFAM: Phosphate-starvation-inducible E-like; KEGG: spe:Spro_4475 phosphate-starvation-inducible protein PsiE YP_004214815.1 KEGG: spe:Spro_4477 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI) YP_004214816.1 TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; KEGG: spe:Spro_4479 aspartate kinase III; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_004214817.1 PFAM: Bile acid:sodium symporter; KEGG: spe:Spro_4480 bile acid:sodium symporter YP_004214818.1 KEGG: spe:Spro_4483 sodium-dependent inorganic phosphate (Pi) transporter; TIGRFAM: sodium-dependent inorganic phosphate (Pi) transporter; Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein YP_004214819.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: pap:PSPA7_1870 hypothetical protein YP_004214820.1 KEGG: ebi:EbC_02940 ABC transporter ATP binding component; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004214821.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_4485 binding-protein-dependent transport systems inner membrane component YP_004214822.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_4486 binding-protein-dependent transport systems inner membrane component YP_004214823.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: spe:Spro_4487 hypothetical protein YP_004214824.1 PFAM: extracellular solute-binding protein family 1; KEGG: spe:Spro_4488 extracellular solute-binding protein YP_004214825.1 KEGG: spe:Spro_4489 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004214826.1 KEGG: yen:YE3875 B12-dependent methionine synthase; TIGRFAM: methionine synthase; PFAM: homocysteine S-methyltransferase; dihydropteroate synthase DHPS; methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; Vitamin B12 dependent methionine synthase activation region YP_004214827.1 KEGG: yen:YE3876 transcriptional repressor IclR; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_004214828.1 KEGG: spe:Spro_4501 bifunctional isocitrate dehydrogenase kinase/phosphatase protein; PFAM: Isocitrate dehydrogenase kinasephosphatase YP_004214829.1 KEGG: ypb:YPTS_3842 isocitrate lyase; TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase YP_004214830.1 TIGRFAM: malate synthase A; KEGG: spe:Spro_4503 malate synthase; PFAM: Malate synthase family protein YP_004214831.1 TIGRFAM: homoserine O-succinyltransferase; KEGG: pct:PC1_3780 homoserine O-succinyltransferase; PFAM: homoserine O-succinyltransferase YP_004214832.1 SMART: AICARFT/IMPCHase bienzyme formylation region; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; KEGG: ypb:YPTS_0321 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein YP_004214833.1 TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: yen:YE0302 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain YP_004214834.1 PFAM: protein of unknown function DUF1481; KEGG: yen:YE0301 hypothetical protein YP_004214835.1 KEGG: spe:Spro_0290 transcriptional regulator HU subunit alpha; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_004214836.1 PFAM: protein of unknown function DUF416; KEGG: spe:Spro_0289 hypothetical protein YP_004214837.1 KEGG: ddd:Dda3937_00239 endonuclease V (deoxyinosine 3'endoduclease); PFAM: Endonuclease V YP_004214838.1 TIGRFAM: uroporphyrinogen decarboxylase; KEGG: spe:Spro_0287 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D) YP_004214839.1 KEGG: ypb:YPTS_0313 NADH pyrophosphatase; PFAM: NUDIX hydrolase; NADH pyrophosphatase-like ; Zinc ribbon NADH pyrophosphatase YP_004214840.1 PFAM: regulator of RNA polymerase sigma(70) subunit Rsd/AlgQ; KEGG: yen:YE0295 anti-RNA polymerase sigma 70 factor YP_004214841.1 KEGG: eca:ECA0232 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC YP_004214842.1 KEGG: dze:Dd1591_3871 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_004214843.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: spe:Spro_0282 UBA/ThiF-type NAD/FAD binding protein YP_004214844.1 KEGG: spe:Spro_0281 sulfur carrier protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein YP_004214845.1 PFAM: thiazole biosynthesis family protein; KEGG: spe:Spro_0280 thiazole synthase YP_004214846.1 KEGG: yen:YE0289 thiamine biosynthesis protein ThiH; TIGRFAM: thiazole biosynthesis protein ThiH; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein YP_004214847.1 TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase subunit alpha; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; KEGG: spe:Spro_0278 DNA-directed RNA polymerase subunit beta'; SMART: RNA polymerase I subunit A domain protein YP_004214848.1 KEGG: spe:Spro_0277 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, subunit beta; PFAM: RNA polymerase Rpb2 domain 6; DNA-directed RNA polymerase, subunit beta, external 1 domain; RNA polymerase Rpb2 domain 3; RNA polymerase subunit beta; RNA polymerase Rpb2 domain 2; RNA polymerase Rpb2 domain 7 YP_004214849.1 KEGG: ebi:EbC_02580 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12 YP_004214850.1 PFAM: ribosomal protein L10; KEGG: dze:Dd1591_3887 50S ribosomal protein L10 YP_004214851.1 KEGG: sdy:SDY_3744 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1 YP_004214852.1 TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11-like; KEGG: spe:Spro_0273 50S ribosomal protein L11; SMART: ribosomal protein L11 YP_004214853.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain-containing protein; KOW domain protein; KEGG: sgl:SG0129 transcription antitermination protein NusG; SMART: NGN domain-containing protein; KOW domain protein YP_004214854.1 KEGG: spe:Spro_0271 preprotein translocase subunit SecE; TIGRFAM: preprotein translocase SecE subunit; PFAM: protein secE/sec61-gamma protein YP_004214855.1 KEGG: spe:Spro_4548 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein YP_004214856.1 PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE0277 acetyltransferase YP_004214857.1 KEGG: yen:YE0276 pantothenate kinase; manually curated; TIGRFAM: pantothenate kinase YP_004214858.1 TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; biotin operon repressor; KEGG: yen:YE0275 biotin--protein ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein YP_004214859.1 KEGG: ddc:Dd586_0205 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain-containing protein; FAD linked oxidase domain protein YP_004214860.1 KEGG: spe:Spro_0266 protoporphyrinogen oxidase YP_004214861.1 KEGG: ypb:YPTS_0286 potassium transporter; TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter YP_004214862.1 PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; Uncharacterised protein family UPF0029, Impact, C-terminal; KEGG: spe:Spro_0264 hypothetical protein YP_004214863.1 PFAM: peptidase M24; KEGG: spe:Spro_0263 proline dipeptidase YP_004214864.1 KEGG: spe:Spro_0261 multifunctional fatty acid oxidation complex subunit alpha; TIGRFAM: fatty oxidation complex, subunit alpha FadB; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein YP_004214865.1 KEGG: spe:Spro_0260 3-ketoacyl-CoA thiolase; TIGRFAM: acetyl-CoA C-acyltransferase FadA; acetyl-CoA acetyltransferase; PFAM: Thiolase-like YP_004214866.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: spe:Spro_0259 FMN reductase YP_004214867.1 KEGG: spe:Spro_0258 3-octaprenyl-4-hydroxybenzoate decarboxylase; TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein YP_004214868.1 KEGG: spe:Spro_0257 peptidase E; PFAM: peptidase S51 dipeptidase E YP_004214869.1 TIGRFAM: transcriptional activator RfaH; PFAM: NGN domain-containing protein; KEGG: cko:CKO_00183 transcriptional activator RfaH; SMART: NGN domain-containing protein YP_004214870.1 PFAM: TatD-related deoxyribonuclease; KEGG: spe:Spro_0254 DNase TatD YP_004214871.1 KEGG: spe:Spro_0253 twin-arginine protein translocation system subunit TatC; TIGRFAM: Sec-independent protein translocase TatC subunit; PFAM: Sec-independent periplasmic protein translocase YP_004214872.1 TIGRFAM: twin-arginine translocation protein, TatB subunit; KEGG: yen:YE0260 sec-independent protein translocase protein TatB YP_004214873.1 KEGG: ses:SARI_03684 twin arginine translocase protein A; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106 YP_004214874.1 KEGG: spe:Spro_0250 ubiquinone biosynthesis protein UbiB; TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain-containing protein YP_004214875.1 PFAM: Sterol-binding domain protein; KEGG: spe:Spro_0249 sterol-binding domain-containing protein YP_004214876.1 KEGG: ypb:YPTS_0271 ubiquinone/menaquinone biosynthesis methyltransferase; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase YP_004214877.1 PFAM: protein of unknown function DUF195; KEGG: ypb:YPTS_0270 hypothetical protein YP_004214878.1 KEGG: ypy:YPK_3947 hypothetical protein YP_004214879.1 KEGG: etr:ETAE_0143 uridine phosphorylase; TIGRFAM: uridine phosphorylase; PFAM: purine or other phosphorylase family 1 YP_004214880.1 KEGG: ebi:EbC_18710 catalase, hydroxyperoxidase II; PFAM: Catalase related subgroup; Catalase domain protein YP_004214881.1 KEGG: spe:Spro_0243 carboxymethylenebutenolidase YP_004214882.1 TIGRFAM: transaldolase; KEGG: yen:YE1979 fructose-6-phosphate aldolase; PFAM: Transaldolase YP_004214883.1 KEGG: yps:YPTB0545 PTS family enzyme I phosphohistidine subunit; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; phosphoryl transfer system HPr; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 YP_004214884.1 KEGG: ypy:YPK_3658 fructose-like permease EIIC subunit 2; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC YP_004214885.1 TIGRFAM: PTS system, fructose-specific, IIB subunnit; KEGG: ypy:YPK_3659 PTS system fructose-like transporter subunit EIIB YP_004214886.1 TIGRFAM: pyruvate formate-lyase; KEGG: ecz:ECS88_4406 formate acetyltransferase 2; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical YP_004214887.1 TIGRFAM: glycyl-radical enzyme activating protein family; KEGG: kpu:KP1_1988 pyruvate formate lyase II activase; PFAM: Radical SAM domain protein YP_004214888.1 TIGRFAM: PTS system, fructose-specific, IIB subunnit; KEGG: cko:CKO_03041 fructose-like phosphotransferase EIIB subunit 3 YP_004214889.1 KEGG: cko:CKO_03040 hypothetical protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004214890.1 TIGRFAM: 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; KEGG: spe:Spro_0242 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; PFAM: methionine synthase vitamin-B12 independent; Cobalamin-independent synthase MetE domain protein YP_004214891.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ddd:Dda3937_02052 DNA-binding protein transcriptional activator, homocysteine-binding protein YP_004214892.1 KEGG: yen:YE0247 hypothetical protein; TIGRFAM: carboxylate/amino acid/amine transporter; PFAM: protein of unknown function DUF6 transmembrane YP_004214893.1 KEGG: ddi:DDB_G0271606 hypothetical protein YP_004214894.1 KEGG: ent:Ent638_2116 hypothetical protein YP_004214895.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: spe:Spro_0238 cytoplasmic glycerophosphodiester phosphodiesterase YP_004214896.1 KEGG: spe:Spro_0237 glycerol-3-phosphate transporter ATP-binding subunit; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004214897.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE0243 glycerol-3-phosphate transporter membrane protein YP_004214898.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_0235 glycerol-3-phosphate transporter permease YP_004214899.1 PFAM: extracellular solute-binding protein family 1; KEGG: kpe:KPK_0300 glycerol-3-phosphate transporter periplasmic binding protein YP_004214900.1 KEGG: ses:SARI_03127 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796 YP_004214901.1 KEGG: sua:Saut_0035 heavy metal efflux pump, CzcA family YP_004214902.1 KEGG: ses:SARI_03125 hypothetical protein YP_004214903.1 PFAM: aminotransferase class I and II; KEGG: spe:Spro_0233 GntR family transcriptional regulator YP_004214904.1 KEGG: pwa:Pecwa_0102 leucine/isoleucine/valine transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_004214905.1 KEGG: yen:YE0233 leucine/isoleucine/valine transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_004214906.1 PFAM: inner-membrane translocator; KEGG: yen:YE0232 leucine/isoleucine/valine transporter permease subunit YP_004214907.1 PFAM: inner-membrane translocator; KEGG: ebi:EbC_42440 high-affinity branched-chain amino acid ABC transporter permease protein YP_004214908.1 PFAM: Extracellular ligand-binding receptor; KEGG: yen:YE0230 branched-chain amino acid-binding protein YP_004214909.1 PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_0227 GCN5-related N-acetyltransferase YP_004214910.1 KEGG: spe:Spro_0224 RNA polymerase factor sigma-32; TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein YP_004214911.1 KEGG: spe:Spro_0223 cell division protein FtsX; TIGRFAM: protein insertion ABC transporter inner membrane subunit FtsX; PFAM: protein of unknown function DUF214 YP_004214912.1 TIGRFAM: Type II (General) Secretory Pathway (IISP) Family protein; cell division ATP-binding protein FtsE; PFAM: ABC transporter related; KEGG: sgl:SG0085 cell division protein FtsE; SMART: AAA ATPase YP_004214913.1 TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: spe:Spro_0221 signal recognition particle-docking protein FtsY; SMART: AAA ATPase YP_004214914.1 TIGRFAM: methyltransferase; KEGG: spe:Spro_0220 16S rRNA m(2)G966-methyltransferase; PFAM: Conserved hypothetical protein CHP00095 YP_004214915.1 PFAM: protein of unknown function DUF1145; KEGG: spe:Spro_0219 hypothetical protein YP_004214916.1 PFAM: YhhN family protein; KEGG: spe:Spro_0212 YhhN family protein YP_004214917.1 KEGG: spe:Spro_0209 zinc/cadmium/mercury/lead-transporting ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase YP_004214918.1 PFAM: SirA-like domain-containing protein; KEGG: esa:ESA_04263 sulfur transfer protein SirA YP_004214919.1 KEGG: spe:Spro_0204 hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165 YP_004214920.1 KEGG: cro:ROD_43451 lipoprotein YP_004214921.1 KEGG: eta:ETA_32580 hypothetical protein YP_004214922.1 KEGG: kpu:KP1_2686 hypothetical protein YP_004214923.1 KEGG: kva:Kvar_2562 type VI secretion system effector, Hcp1 family; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796 YP_004214924.1 KEGG: ebi:EbC_02250 MFS family, sn-glycerol-3-phosphate transport protein; TIGRFAM: glycerol-3-phosphate transporter; phosphoglycerate transporter; PFAM: major facilitator superfamily MFS_1 YP_004214925.1 KEGG: ypz:YPZ3_2128 mannitol transport ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004214926.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: ent:Ent638_2662 phosphomannomutase YP_004214927.1 KEGG: ypb:YPTS_2613 LacI family transcription regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_004214928.1 PFAM: extracellular solute-binding protein family 1; KEGG: ypb:YPTS_2612 extracellular solute-binding protein YP_004214929.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypy:YPK_1635 binding-protein-dependent transport systems inner membrane component YP_004214930.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypb:YPTS_2610 binding-protein-dependent transport systems inner membrane component YP_004214931.1 KEGG: gym:GYMC10_0576 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_004214932.1 PFAM: glycosidase related protein; KEGG: ypb:YPTS_2609 glycosidase PH1107-related YP_004214933.1 PFAM: protein of unknown function DUF1861; KEGG: pjd:Pjdr2_5413 protein of unknown function DUF1861 YP_004214934.1 PFAM: Polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: enc:ECL_04452 TPS family two-partner secretion family member CdiB YP_004214935.1 KEGG: kpe:KPK_4110 filamentous haemagglutinin family protein; TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein; protein of unknown function DUF638 hemagglutinin/hemolysin YP_004214936.1 KEGG: epy:EpC_29120 hypothetical protein YP_004214937.1 PFAM: protein of unknown function DUF638 hemagglutinin/hemolysin; KEGG: eic:NT01EI_3309 hypothetical protein YP_004214938.1 KEGG: hya:HY04AAS1_0382 integral membrane sensor signal transduction histidine kinase YP_004214939.1 PFAM: Domain of unknown function DUF1813 HSP20-like; KEGG: plu:plu3591 hypothetical protein YP_004214940.1 KEGG: eca:ECA3417 phage regulatory protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004214941.1 KEGG: epy:EpC_29120 hypothetical protein YP_004214942.1 KEGG: spe:Spro_0197 sugar phosphatase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_004214943.1 KEGG: spe:Spro_0196 lysophospholipase L2; PFAM: alpha/beta hydrolase fold YP_004214944.1 KEGG: pwa:Pecwa_4152 homoserine/homoserine lactone efflux protein; TIGRFAM: homoserine/threonine efflux pump; PFAM: lysine exporter protein (LYSE/YGGA) YP_004214945.1 KEGG: yen:YE0205 threonine efflux system; TIGRFAM: homoserine/threonine efflux pump; PFAM: lysine exporter protein (LYSE/YGGA) YP_004214946.1 TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: RQC domain; DEAD/DEAH box helicase domain protein; helicase domain protein; HRDC domain protein; KEGG: yen:YE0204 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase ; helicase domain protein; HRDC domain protein YP_004214947.1 KEGG: spe:Spro_0192 phospholipase A; PFAM: phospholipase A1 YP_004214949.1 PFAM: thioesterase superfamily protein; KEGG: spe:Spro_0191 hypothetical protein YP_004214950.1 KEGG: esa:ESA_03741 hypothetical protein; TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane YP_004214951.1 KEGG: spe:Spro_0189 ammonia monooxygenase; TIGRFAM: membrane protein AbrB duplication; PFAM: ammonia monooxygenase YP_004214952.1 KEGG: spe:Spro_0188 magnesium/nickel/cobalt transporter CorA; TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein YP_004214953.1 KEGG: ddc:Dd586_1324 hypothetical protein YP_004214954.1 KEGG: spe:Spro_0186 DNA-dependent helicase II; TIGRFAM: DNA helicase II; PFAM: UvrD/REP helicase YP_004214955.1 KEGG: dda:Dd703_0235 HAD-superfamily hydrolase, subfamily IA, variant 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004214956.1 KEGG: yen:YE0194 site-specific tyrosine recombinase XerC; TIGRFAM: tyrosine recombinase XerC; PFAM: integrase family protein; integrase domain protein SAM domain protein YP_004214957.1 PFAM: protein of unknown function DUF484; KEGG: ypb:YPTS_0204 hypothetical protein YP_004214958.1 KEGG: spe:Spro_0182 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase YP_004214959.1 manually curated; KEGG: yen:YE0191 lipoprotein YP_004214960.1 KEGG: spe:Spro_0179 adenylate cyclase; PFAM: adenylate cyclase class-I YP_004214961.1 KEGG: spe:Spro_0178 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase YP_004214962.1 PFAM: Uroporphyrinogen III synthase HEM4; KEGG: spe:Spro_0177 uroporphyrinogen-III synthase YP_004214963.1 KEGG: yen:YE0185 uroporphyrinogen III C-methyltransferase; PFAM: protein of unknown function DUF513 hemX YP_004214964.1 KEGG: spe:Spro_0175 protoheme IX biogenesis protein; TIGRFAM: HemY protein; PFAM: HemY domain protein YP_004214965.1 PFAM: amino acid permease-associated region; KEGG: ypb:YPTS_0192 transport protein YifK YP_004214966.1 TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; KEGG: plu:plu4651 UDP-N-acetyl-D-mannosaminuronic acid transferase; PFAM: glycosyl transferase WecB/TagA/CpsF YP_004214967.1 PFAM: WzyE family protein; KEGG: spe:Spro_0171 common antigen polymerase YP_004214968.1 PFAM: 4-alpha-L-fucosyltransferase; KEGG: spe:Spro_0170 4-alpha-L-fucosyltransferase YP_004214969.1 PFAM: polysaccharide biosynthesis protein; KEGG: spe:Spro_0169 polysaccharide biosynthesis protein YP_004214970.1 KEGG: spe:Spro_0168 TDP-4-oxo-6-deoxy-D-glucose transaminase; TIGRFAM: TDP-4-keto-6-deoxy-D-glucose transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase YP_004214971.1 KEGG: xne:XNC1_0390 acyl-CoA N-acyltransferase, lipopolysaccharide biosynthesis protein; TIGRFAM: TDP-D-fucosamine acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_004214972.1 KEGG: spe:Spro_0164 UDP-N-acetyl-D-mannosamine dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_004214973.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; manually curated; KEGG: spe:Spro_0163 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase YP_004214974.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: spe:Spro_0162 lipopolysaccharide biosynthesis protein WzzE YP_004214975.1 KEGG: ypb:YPTS_0180 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; PFAM: Glycosyl transferase, family 4, conserved region YP_004214976.1 TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; Rho termination factor RNA-binding; Rho termination factor domain protein; KEGG: ebi:EbC_01950 transcription termination factor Rho; SMART: Cold shock protein; AAA ATPase YP_004214977.1 KEGG: ent:Ent638_4004 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein YP_004214978.1 KEGG: ypb:YPTS_0177 ATP-dependent RNA helicase RhlB; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004214979.1 KEGG: spe:Spro_0157 guanosine pentaphosphate phosphohydrolase; PFAM: Ppx/GppA phosphatase YP_004214980.1 KEGG: spe:Spro_0156 ATP-dependent DNA helicase Rep; TIGRFAM: ATP-dependent DNA helicase Rep; PFAM: UvrD/REP helicase YP_004214981.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: ctu:Ctu_02140 peptidyl-prolyl cis-trans isomerase C YP_004214982.1 TIGRFAM: ketol-acid reductoisomerase; KEGG: yen:YE0155 ketol-acid reductoisomerase; PFAM: acetohydroxy acid isomeroreductase; Acetohydroxy acid isomeroreductase catalytic domain-containing protein YP_004214983.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: yen:YE0154 DNA-binding transcriptional regulator IlvY YP_004214984.1 KEGG: spe:Spro_4756 threonine dehydratase; TIGRFAM: threonine dehydratase, biosynthetic; PFAM: Pyridoxal-5'-phosphate-dependent protein subunit beta; Threonine dehydratase domain-containing protein YP_004214985.1 TIGRFAM: dihydroxy-acid dehydratase; KEGG: spe:Spro_4757 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_004214986.1 KEGG: pct:PC1_4030 branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV YP_004214987.1 KEGG: yen:YE0149 acetolactate synthase 2 regulatory subunit YP_004214988.1 KEGG: yen:YE0148 acetolactate synthase 2 catalytic subunit; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein YP_004214989.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_4761 major facilitator transporter YP_004214990.1 TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: pct:PC1_4033 Mg chelatase, subunit ChlI; SMART: AAA ATPase YP_004214991.1 PFAM: protein of unknown function DUF413; KEGG: spe:Spro_4763 hypothetical protein YP_004214992.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: spe:Spro_4764 transcriptional regulator HdfR YP_004214993.1 PFAM: inner-membrane translocator; KEGG: spe:Spro_4765 inner membrane ABC transporter permease YjfF YP_004214994.1 PFAM: inner-membrane translocator; KEGG: ypb:YPTS_0138 inner-membrane translocator YP_004214995.1 KEGG: ypy:YPK_4067 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004214996.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: pwa:Pecwa_4229 periplasmic binding protein/LacI transcriptional regulator YP_004214997.1 PFAM: transposase IS3/IS911 family protein; KEGG: spe:Spro_0375 transposase IS3/IS911 family protein YP_004214998.1 PFAM: Integrase catalytic region; KEGG: enc:ECL_A124 IS3 family transposase orfB YP_004214999.1 TIGRFAM: glutamate racemase; KEGG: spe:Spro_4769 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_004215000.1 KEGG: ypz:YPZ3_3451 vitamin B12 receptor protein; TIGRFAM: TonB-dependent vitamin B12 receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004215001.1 KEGG: spe:Spro_4771 tRNA (uracil-5-)-methyltransferase; TIGRFAM: tRNA (uracil-5-)-methyltransferase; PFAM: (Uracil-5)-methyltransferase YP_004215002.1 PFAM: glycosyl hydrolase family 88; KEGG: pct:PC1_3379 glycosyl hydrolase family 88 YP_004215003.1 PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_3380 oligogalacturonide transporter YP_004215005.1 PFAM: protein of unknown function DUF1422; KEGG: pct:PC1_0190 hypothetical protein YP_004215006.1 PFAM: regulatory protein TetR; KEGG: ebi:EbC_01760 fatty acid biosynthesis regulator YP_004215007.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: yen:YE0134 soluble pyridine nucleotide transhydrogenase YP_004215008.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_4775 DNA-binding transcriptional regulator OxyR YP_004215009.1 KEGG: yen:YE0132 peroxiredoxin/glutaredoxin family protein; TIGRFAM: glutaredoxin-family domain protein; PFAM: Redoxin domain protein; glutaredoxin YP_004215010.1 KEGG: seh:SeHA_C4451 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase YP_004215011.1 KEGG: pwa:Pecwa_4250 acetylglutamate kinase; TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_004215012.1 TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: ddd:Dda3937_02059 N-acetyl-gamma-glutamylphosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region YP_004215013.1 KEGG: ebi:EbC_01680 acetylornithine deacetylase; TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein YP_004215014.1 KEGG: ypb:YPTS_0113 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase, C-terminal region YP_004215015.1 TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: spe:Spro_4784 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase YP_004215016.1 KEGG: spe:Spro_4785 bifunctional aspartate kinase II/homoserine dehydrogenase II; TIGRFAM: aspartate kinase; PFAM: homoserine dehydrogenase; aspartate/glutamate/uridylate kinase; homoserine dehydrogenase NAD-binding YP_004215017.1 KEGG: eta:ETA_01270 cystathionine gamma-synthase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_004215018.1 PFAM: methionine repressor MetJ; KEGG: yen:YE0110 transcriptional repressor protein MetJ YP_004215019.1 KEGG: spe:Spro_4788 50S ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31 YP_004215020.1 TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: spe:Spro_4789 primosome assembly protein PriA; SMART: DEAD-like helicase ; helicase domain protein YP_004215021.1 KEGG: yen:YE0107 DNA-binding transcriptional regulator CytR; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004215022.1 KEGG: spe:Spro_4791 cell division protein FtsN; TIGRFAM: cell division protein FtsN; PFAM: Sporulation domain-containing protein YP_004215023.1 PFAM: 20S proteasome A and B subunits; KEGG: dze:Dd1591_0114 ATP-dependent protease peptidase subunit YP_004215024.1 TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; KEGG: spe:Spro_4793 ATP-dependent protease ATP-binding subunit HslU; SMART: AAA ATPase YP_004215025.1 KEGG: ypb:YPTS_0098 1,4-dihydroxy-2-naphthoate octaprenyltransferase; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase YP_004215026.1 KEGG: ebi:EbC_01530 regulator of ribonuclease activity A; TIGRFAM: regulator of ribonuclease activity A; PFAM: Dimethylmenaquinone methyltransferase YP_004215027.1 PFAM: protein of unknown function DUF904; KEGG: spe:Spro_4796 hypothetical protein YP_004215028.1 KEGG: ypb:YPTS_0091 MIP family channel protein; TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein YP_004215029.1 KEGG: spe:Spro_4798 glycerol kinase; TIGRFAM: glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like YP_004215030.1 TIGRFAM: fructose-1,6-bisphosphatase, class II; KEGG: spe:Spro_4799 fructose 1,6-bisphosphatase II; PFAM: GlpX family protein YP_004215031.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_4800 multidrug resistance protein D YP_004215032.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: ebi:EbC_01470 ferredoxin-NADP reductase YP_004215033.1 PFAM: protein of unknown function DUF805; KEGG: ypi:YpsIP31758_0098 hypothetical protein YP_004215034.1 PFAM: protein of unknown function DUF1454; KEGG: spe:Spro_4804 hypothetical protein YP_004215035.1 TIGRFAM: triosephosphate isomerase; KEGG: yen:YE0093 triosephosphate isomerase; PFAM: triosephosphate isomerase YP_004215036.1 KEGG: ypb:YPTS_0078 sulfate transporter subunit; TIGRFAM: sulfate ABC transporter periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_004215037.1 KEGG: ypi:YpsIP31758_0089 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase YP_004215038.1 KEGG: yen:YE0087 periplasmic stress adaptor protein CpxP YP_004215039.1 KEGG: eta:ETA_00950 DNA-binding transcriptional regulator CpxR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004215040.1 KEGG: yen:YE0085 two-component sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004215041.1 KEGG: ypy:YPK_4135 RNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU) YP_004215042.1 TIGRFAM: serine O-acetyltransferase; KEGG: yen:YE0082 serine acetyltransferase YP_004215043.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: spe:Spro_4815 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_004215044.1 KEGG: yen:YE0080 preprotein translocase subunit SecB; TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB YP_004215045.1 KEGG: yen:YE0079 glutaredoxin 3; TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin YP_004215046.1 KEGG: yen:YE0078 hypothetical protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004215047.1 TIGRFAM: phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; KEGG: yen:YE0077 phosphoglyceromutase; PFAM: BPG-independent PGAM domain protein; metalloenzyme domain protein YP_004215048.1 PFAM: Peptidase M23; KEGG: spe:Spro_4820 hypothetical protein YP_004215049.1 KEGG: ent:Ent638_0121 protein of unknown function DUF610, YibQ; manually curated; PFAM: protein of unknown function DUF610 YibQ YP_004215050.1 PFAM: glycosyl transferase group 1; KEGG: ebi:EbC_00820 glycosyl transferase, group 1 YP_004215051.1 KEGG: ebi:EbC_00810 hypothetical protein YP_004215052.1 KEGG: ypb:YPTS_0059 L-threonine 3-dehydrogenase; TIGRFAM: L-threonine 3-dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein YP_004215053.1 TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase; KEGG: spe:Spro_4824 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: aminotransferase class I and II YP_004215054.1 KEGG: pct:PC1_4088 ADP-L-glycero-D-mannoheptose-6-epimerase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_004215055.1 KEGG: ddd:Dda3937_02040 ADP-heptose:LPS heptosyltransferase II; TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9 YP_004215056.1 KEGG: spe:Spro_4827 ADP-heptose:LPS heptosyl transferase I; TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9 YP_004215057.1 PFAM: glycosyl transferase family 9; KEGG: ebi:EbC_00710 glycosyl transferase, family 9 YP_004215058.1 KEGG: eca:ECA0157 lipopolysaccharide 1,2-glucosyltransferase; PFAM: glycosyl transferase family 8 YP_004215059.1 PFAM: O-antigen polymerase; KEGG: ebi:EbC_pEb10200130 lipid A core, surface polymer ligase WaaL YP_004215060.1 PFAM: glycosyl transferase family 2; KEGG: ebi:EbC_00700 glycosyl transferase family 2 YP_004215061.1 manually curated; TIGRFAM: lipopolysaccharide heptosyltransferase III; KEGG: pam:PANA_3896 RfaQ; PFAM: glycosyl transferase family 9 YP_004215062.1 PFAM: glycosyl transferase group 1; KEGG: ebi:EbC_00680 lipopolysaccharide glycosyltransferase YP_004215063.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; glycosyl transferase group 1; KEGG: yen:YE0069 3-deoxy-D-manno-octulosonic-acid transferase YP_004215064.1 PFAM: glycosyl transferase family 2; KEGG: yen:YE0068 lipopolysaccharide core biosynthesis glycosyl transferase YP_004215065.1 TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: spe:Spro_4838 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase YP_004215066.1 TIGRFAM: formamidopyrimidine-DNA glycosylase; KEGG: spe:Spro_4839 formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding YP_004215067.1 KEGG: spe:Spro_4840 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33 YP_004215068.1 KEGG: spe:Spro_4841 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28 YP_004215069.1 KEGG: spe:Spro_4842 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC YP_004215070.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; KEGG: spe:Spro_4843 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein YP_004215071.1 TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; KEGG: spe:Spro_4844 deoxyuridine 5'-triphosphate nucleotidohydrolase; PFAM: deoxyUTP pyrophosphatase YP_004215072.1 PFAM: regulatory protein TetR; KEGG: spe:Spro_4845 nucleoid occlusion protein YP_004215073.1 KEGG: ypb:YPTS_1106 hypothetical protein YP_004215074.1 PFAM: Protein of unknown function DUF2157, membrane; KEGG: ypb:YPTS_1107 hypothetical protein YP_004215075.1 TIGRFAM: orotate phosphoribosyltransferase; KEGG: spe:Spro_4846 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004215076.1 TIGRFAM: ribonuclease PH; KEGG: spe:Spro_4847 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 YP_004215077.1 PFAM: YicC-like domain-containing protein; domain of unknown function DUF1732; KEGG: spe:Spro_4848 hypothetical protein YP_004215078.1 KEGG: yen:YE1576 3-oxoacyl-(acyl carrier protein) synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase YP_004215079.1 PFAM: regulatory protein TetR; KEGG: ppu:PP_3300 TetR family transcriptional regulator YP_004215080.1 PFAM: Uncharacterised protein family UPF0126; KEGG: spe:Spro_4863 hypothetical protein YP_004215081.1 PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; KEGG: ypb:YPTS_0039 NAD-dependent DNA ligase LigB; SMART: NAD-dependent DNA ligase ; Helix-hairpin-helix DNA-binding class 1 YP_004215082.1 SMART: guanylate kinase/L-type calcium channel region; TIGRFAM: guanylate kinase; KEGG: cko:CKO_05105 guanylate kinase; PFAM: guanylate kinase YP_004215083.1 KEGG: ent:Ent638_0090 DNA-directed RNA polymerase, omega subunit; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6 YP_004215084.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: RelA/SpoT family protein; KEGG: yen:YE0045 bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase; PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain-containing protein; amino acid-binding ACT domain protein YP_004215085.1 KEGG: spe:Spro_4870 tRNA guanosine-2'-O-methyltransferase; PFAM: tRNA/rRNA methyltransferase (SpoU) YP_004215086.1 TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; KEGG: spe:Spro_4871 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase domain protein YP_004215087.1 TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; KEGG: spe:Spro_4223 PTS system lactose/cellobiose family transporter subunit IIC; PFAM: phosphotransferase system EIIC YP_004215088.1 KEGG: yen:YE0042 sodium/glutamate symport carrier protein; TIGRFAM: sodium/glutamate symporter; PFAM: sodium/glutamate symporter YP_004215089.1 KEGG: dze:Dd1591_4150 uracil-xanthine permease; TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease YP_004215090.1 PFAM: AsmA family protein; KEGG: spe:Spro_4874 AsmA family protein YP_004215091.1 KEGG: cko:CKO_03124 hypothetical protein; TIGRFAM: thioesterase domain protein; PFAM: Thioesterase ; GCN5-related N-acetyltransferase YP_004215092.1 KEGG: spe:Spro_4877 D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_004215093.1 KEGG: spe:Spro_4878 ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN YP_004215094.1 KEGG: plu:plu0241 phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004215095.1 KEGG: spe:Spro_4880 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein YP_004215096.1 KEGG: yen:YE0027 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp YP_004215097.1 KEGG: yen:YE0026 nitrogen regulation protein NR(II); PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein YP_004215098.1 TIGRFAM: nitrogen regulation protein NR(I); PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; KEGG: spe:Spro_4883 nitrogen regulation protein NR(I); SMART: response regulator receiver; AAA ATPase YP_004215099.1 TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; KEGG: spe:Spro_4884 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB YP_004215100.1 PFAM: protein of unknown function DUF414; KEGG: yen:YE0023 hypothetical protein YP_004215101.1 KEGG: spe:Spro_4886 ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein HSR1-related YP_004215102.1 TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; KEGG: spe:Spro_4887 DNA polymerase I; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; 3'-5' exonuclease; DNA-directed DNA polymerase YP_004215103.1 PFAM: DSBA oxidoreductase; KEGG: spe:Spro_4889 periplasmic protein disulfide isomerase I YP_004215104.1 PFAM: aminoglycoside phosphotransferase; KEGG: spe:Spro_4890 serine/threonine protein kinase YP_004215105.1 PFAM: protein of unknown function DUF1040; KEGG: spe:Spro_4891 hypothetical protein YP_004215106.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: dze:Dd1591_4168 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_004215107.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; KEGG: spe:Spro_4893 molybdopterin-guanine dinucleotide biosynthesis protein B YP_004215108.1 KEGG: spe:Spro_4894 GntR domain-containing protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004215109.1 KEGG: spe:Spro_4896 transcriptional repressor RbsR; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004215110.1 KEGG: spe:Spro_4897 ribokinase; TIGRFAM: ribokinase; PFAM: PfkB domain protein YP_004215111.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE0011 D-ribose transporter subunit RbsB YP_004215112.1 PFAM: inner-membrane translocator; KEGG: yen:YE0010 ribose ABC transporter permease protein YP_004215113.1 KEGG: spe:Spro_4900 D-ribose transporter ATP binding protein; PFAM: ABC transporter related; Mastoparan; SMART: AAA ATPase YP_004215114.1 PFAM: RbsD or FucU transport; KEGG: spe:Spro_4901 D-ribose pyranase YP_004215115.1 KEGG: spe:Spro_4902 potassium transport protein Kup; TIGRFAM: potassium uptake protein; PFAM: K potassium transporter YP_004215116.1 KEGG: ypb:YPTS_4166 regulatory ATPase RavA; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_004215117.1 SMART: von Willebrand factor type A; KEGG: yen:YE0005 hypothetical protein YP_004215118.1 KEGG: spe:Spro_4906 DNA-binding transcriptional regulator AsnC; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_004215119.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: ypb:YPTS_4170 flavodoxin YP_004215120.1 KEGG: spe:Spro_4908 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A YP_004215121.1 KEGG: yen:YE4214 16S rRNA methyltransferase GidB; TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein YP_004215122.1 PFAM: ATP synthase I chain; KEGG: spe:Spro_0001 F0F1 ATP synthase subunit I YP_004215123.1 KEGG: dda:Dd703_3987 ATP synthase F0 A subunit; TIGRFAM: ATP synthase F0 A subunit; PFAM: H+transporting two-sector ATPase A subunit YP_004215124.1 KEGG: dze:Dd1591_4189 F0F1 ATP synthase subunit C; TIGRFAM: ATP synthase F0 C subunit; PFAM: H+transporting two-sector ATPase C subunit YP_004215125.1 KEGG: etr:ETAE_3529 F0F1-type ATP synthase, subunit B; TIGRFAM: ATP synthase F0 B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit YP_004215126.1 KEGG: yen:YE4209 F0F1 ATP synthase subunit delta; TIGRFAM: ATP synthase F1 subunit delta; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit YP_004215127.1 KEGG: pwa:Pecwa_4545 F0F1 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1 subunit alpha; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; H+transporting two-sector ATPase alpha/subunit beta domain protein YP_004215128.1 KEGG: spe:Spro_0007 F0F1 ATP synthase subunit gamma; TIGRFAM: ATP synthase F1 subunit gamma; PFAM: H+transporting two-sector ATPase subunit gamma YP_004215129.1 TIGRFAM: ATP synthase F1 subunit beta; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; H+transporting two-sector ATPase alpha/subunit beta domain protein; KEGG: spe:Spro_0008 F0F1 ATP synthase subunit beta; SMART: AAA ATPase YP_004215130.1 KEGG: ddd:Dda3937_00144 F1 sector of membrane-bound ATP synthase, subunit epsilon; TIGRFAM: ATP synthase F1 subunit epsilon; PFAM: ATPase, F1 complex, delta/subunit epsilon-like YP_004215131.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; KEGG: enc:ECL_05151 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein YP_004215132.1 KEGG: spe:Spro_0011 glucosamine--fructose-6-phosphate aminotransferase; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS) YP_004215133.1 KEGG: pam:PANA_4213 RluF; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_004215134.1 KEGG: spe:Spro_0012 phosphate ABC transporter periplasmic substrate-binding protein PstS; TIGRFAM: phosphate ABC transporter periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_004215135.1 KEGG: spe:Spro_0013 phosphate transporter permease subunit PstC; TIGRFAM: phosphate ABC transporter inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component YP_004215136.1 KEGG: yen:YE4199 phosphate transporter permease subunit PtsA; TIGRFAM: phosphate ABC transporter inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component YP_004215137.1 TIGRFAM: phosphate ABC transporter ATPase subunit; PFAM: ABC transporter related; KEGG: ypb:YPTS_4189 phosphate transporter ATP-binding protein; SMART: AAA ATPase YP_004215138.1 KEGG: spe:Spro_0016 transcriptional regulator PhoU; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein YP_004215139.1 PFAM: regulatory protein TetR; KEGG: spe:Spro_2513 TetR family transcriptional regulator YP_004215140.1 PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: kva:Kvar_2145 xylose isomerase domain protein TIM barrel YP_004215141.1 KEGG: spe:Spro_0020 6-phosphogluconate phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004215142.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: spe:Spro_0021 xanthine/uracil/vitamin C permease YP_004215143.1 PFAM: NADPH-dependent FMN reductase; KEGG: spe:Spro_0023 NADPH-dependent FMN reductase YP_004215144.1 KEGG: spe:Spro_0024 hypothetical protein YP_004215145.1 KEGG: yen:YE4183 methyl-accepting chemotaxis receptor protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer YP_004215146.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rsl:RPSI07_0113 transcription regulator protein, LysR family (AaeR) YP_004215147.1 PFAM: dTDP-4-dehydrorhamnose reductase; KEGG: kva:Kvar_0679 dTDP-4-dehydrorhamnose reductase YP_004215148.1 KEGG: spe:Spro_0027 tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related YP_004215149.1 KEGG: spe:Spro_0028 inner membrane protein translocase component YidC; TIGRFAM: membrane protein insertase, YidC/Oxa1 family domain containing; membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein YP_004215150.1 PFAM: protein of unknown function DUF37; KEGG: ddd:Dda3937_01062 hypothetical protein YP_004215151.1 KEGG: yen:YE4176 ribonuclease P; TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein YP_004215152.1 KEGG: pwa:Pecwa_4618 50S ribosomal protein L34; TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34 YP_004215153.1 KEGG: eca:ECA2240 lipoprotein; manually curated; PFAM: protein of unknown function DUF187 YP_004215154.1 KEGG: ebi:EbC_03350 TonB-dependent receptor for Fe(III)-coprogen, Fe(III)-ferrioxamine B and Fe(III)-rhodotrulic acid; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004215155.1 KEGG: ebi:EbC_21120 conserved uncharacterized protein YP_004215156.1 KEGG: ent:Ent638_2177 hypothetical protein YP_004215157.1 PFAM: YebG family protein; KEGG: ent:Ent638_1887 YebG family protein YP_004215158.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pam:PANA_4172 hypothetical protein YP_004215159.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ent:Ent638_1889 LysR family transcriptional regulator YP_004215160.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ent:Ent638_1888 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004215161.1 KEGG: pct:PC1_0653 hypothetical protein YP_004215162.1 PFAM: protein of unknown function DUF81; KEGG: ddc:Dd586_0859 protein of unknown function DUF81 YP_004215163.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpd:BURPS668_A0906 LysR family transcriptional regulator YP_004215164.1 KEGG: set:SEN3426 trehalase; PFAM: glycoside hydrolase family 37 YP_004215165.1 TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; KEGG: pam:PANA_2235 OtsA; PFAM: glycosyl transferase family 20 YP_004215166.1 KEGG: pam:PANA_2236 OtsB; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase YP_004215167.1 PFAM: Protein of unknown function DUF2493; KEGG: kva:Kvar_3148 protein of unknown function DUF2493 YP_004215168.1 PFAM: Na+/Picotransporter; PhoU family protein; KEGG: kva:Kvar_3147 Na/Pi-cotransporter II-related protein YP_004215169.1 KEGG: kpe:KPK_3276 magnesium-translocating P-type ATPase; TIGRFAM: magnesium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase YP_004215170.1 KEGG: kpe:KPK_3274 hypothetical protein YP_004215171.1 PFAM: Oligogalacturonate-specific porin; KEGG: ent:Ent638_3298 oligogalacturonate-specific porin YP_004215172.1 KEGG: pwa:Pecwa_4562 exopolygalacturonate lyase YP_004215173.1 KEGG: kva:Kvar_1707 oligogalacturonide transporter YP_004215174.1 PFAM: protein of unknown function DUF535; KEGG: ebi:EbC_03470 virulence protein YP_004215175.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: kpu:KP1_2232 acid phosphatase; SMART: phosphoesterase PA-phosphatase related YP_004215176.1 KEGG: ctu:Ctu_40860 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796 YP_004215177.1 KEGG: ctu:Ctu_40850 hypothetical protein YP_004215178.1 KEGG: zmn:Za10_0201 histidine kinase YP_004215179.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: spe:Spro_2371 hypothetical protein YP_004215180.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: spe:Spro_2370 hypothetical protein YP_004215181.1 KEGG: spe:Spro_2369 hypothetical protein YP_004215182.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: eta:ETA_33700 hypothetical protein YP_004215183.1 KEGG: spe:Spro_2330 lipoprotein YP_004215184.1 KEGG: pct:PC1_0027 major facilitator superfamily MFS_1; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004215185.1 PFAM: dihydrodipicolinate synthetase; KEGG: plu:plu1530 hypothetical protein YP_004215186.1 KEGG: mxa:MXAN_0698 hypothetical protein YP_004215187.1 KEGG: ebi:EbC_20980 virulence effector protein SrfA YP_004215188.1 PFAM: virulence protein SrfB; KEGG: pwa:Pecwa_2382 virulence protein SrfB YP_004215189.1 PFAM: Virulence effector, SrfC; KEGG: dda:Dd703_1880 virulence factor YP_004215190.1 PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: spe:Spro_3568 fructose-bisphosphate aldolase YP_004215191.1 PFAM: hypothetical protein; KEGG: ebi:EbC_11790 ThiJ/PfpI domain protein YP_004215192.1 PFAM: regulatory protein TetR; KEGG: sgl:SG0229 transcriptional regulator YP_004215193.1 PFAM: Heat shock protein 70; KEGG: esa:ESA_02869 hypothetical protein YP_004215194.1 PFAM: heat shock protein DnaJ domain protein; KEGG: esa:ESA_02868 hypothetical protein YP_004215195.1 KEGG: ctu:Ctu_10100 hypothetical protein YP_004215196.1 KEGG: epy:EpC_14960 cytoplasmic alpha-amylase; PFAM: alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain YP_004215197.1 KEGG: yen:YE3594 proline/glycine betaine transporter; TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: Osmosensory transporter coiled coil YP_004215198.1 KEGG: kpu:KP1_4543 translocation protein TolB precursor YP_004215199.1 PFAM: cupin; KEGG: kva:Kvar_0815 cupin 2 conserved barrel domain protein YP_004215200.1 PFAM: ribose/galactose isomerase; KEGG: ypb:YPTS_2039 hypothetical protein YP_004215201.1 KEGG: kva:Kvar_0805 2-deoxy-D-gluconate 3-dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR YP_004215202.1 KEGG: bfo:BRAFLDRAFT_127718 hypothetical protein YP_004215203.1 KEGG: spe:Spro_1931 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004215204.1 KEGG: spe:Spro_1930 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004215205.1 KEGG: spe:Spro_1929 hydrophobe/amphiphile efflux-1 (HAE1) family protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_004215206.1 PFAM: protein of unknown function UPF0074; KEGG: spe:Spro_1928 BadM/Rrf2 family transcriptional regulator YP_004215208.1 KEGG: afr:AFE_1562 hypothetical protein YP_004215209.1 KEGG: afr:AFE_1561 hypothetical protein YP_004215211.1 KEGG: ent:Ent638_4271 hypothetical protein YP_004215212.1 KEGG: zmo:ZMO0352 hypothetical protein YP_004215213.1 KEGG: ent:Ent638_2216 hypothetical protein YP_004215214.1 KEGG: ent:Ent638_2217 hypothetical protein YP_004215215.1 KEGG: ent:Ent638_2218 hypothetical protein YP_004215216.1 PFAM: protein of unknown function DUF1983; Fibronectin type III domain protein; KEGG: ent:Ent638_2219 fibronectin, type III domain-containing protein YP_004215217.1 PFAM: lambda tail assembly I; KEGG: ent:Ent638_2220 bacteriophage lambda tail assembly I YP_004215218.1 KEGG: ebi:EbC_32310 hypothetical protein YP_004215219.1 KEGG: enc:ECL_01713 GP19; PFAM: NLP/P60 protein; SMART: Mov34/MPN/PAD-1 family protein YP_004215220.1 KEGG: ent:Ent638_2223 phage minor tail protein L; TIGRFAM: phage minor tail protein L; PFAM: minor tail protein L YP_004215221.1 PFAM: minor tail family protein; KEGG: pmr:PMI0523 phage minor tail protein YP_004215222.1 KEGG: ecz:ECS88_1205 minor tail protein precursor H; TIGRFAM: phage tail tape measure protein, lambda family; PFAM: Prophage tail length tape measure YP_004215223.1 KEGG: ebd:ECBD_2861 phage tail assembly protein T; TIGRFAM: phage tail assembly protein T; PFAM: Minor tail T family protein YP_004215224.1 KEGG: enc:ECL_01708 GP14; TIGRFAM: phage minor tail protein G; PFAM: minor tail protein G YP_004215225.1 KEGG: enc:ECL_01707 GP13; PFAM: Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein YP_004215226.1 PFAM: minor tail U; KEGG: enc:ECL_01706 minor tail protein U YP_004215227.1 PFAM: Prophage minor tail Z family protein; KEGG: enc:ECL_01705 GP11 YP_004215228.1 KEGG: sew:SeSA_A0697 hypothetical protein YP_004215229.1 PFAM: protein of unknown function UCP030771; KEGG: enc:ECL_01703 hypothetical protein YP_004215230.1 PFAM: peptidase S14 ClpP; KEGG: eoi:ECO111_3370 protease/scaffold protein YP_004215231.1 KEGG: eck:EC55989_1707 portal protein (head-tail preconnector protein) from prophage; TIGRFAM: phage portal protein, lambda family; PFAM: portal protein lambda YP_004215232.1 KEGG: ect:ECIAI39_4880 conserved hypothetical protein from prophage YP_004215233.1 PFAM: terminase GpA; KEGG: eci:UTI89_C5117 DNA packaging protein of prophage CP-933K YP_004215234.1 PFAM: protein of unknown function DUF1441; KEGG: enc:ECL_01685 hypothetical protein YP_004215235.1 KEGG: sdy:SDY_2015 hypothetical protein YP_004215236.1 PFAM: lysis protein; KEGG: xbo:XBJ1_1386 endopeptidase YP_004215237.1 KEGG: cko:CKO_01876 hypothetical protein; PFAM: glycoside hydrolase family 24 YP_004215238.1 PFAM: Lysis S family protein; KEGG: ecd:ECDH10B_1338 lysis S family protein YP_004215239.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: xbo:XBJ1_1254 hypothetical protein YP_004215240.1 KEGG: eic:NT01EI_1431 hypothetical protein YP_004215242.1 KEGG: apt:APA01_23270 hypothetical protein YP_004215243.1 PFAM: antitermination protein; KEGG: kpu:KP1_2171 prophage antitermination protein YP_004215244.1 SMART: HNH nuclease; KEGG: epy:EpC_20670 conserved uncharacterized protein YP_004215245.1 PFAM: MT-A70 family protein; KEGG: kpe:KPK_4187 adenine-specific DNA methyltransferase YP_004215246.1 KEGG: eoh:ECO103_5189 hypothetical protein YP_004215247.1 KEGG: cro:ROD_26171 hypothetical protein YP_004215248.1 KEGG: epy:EpC_20730 hypothetical protein YP_004215249.1 KEGG: epy:EpC_20740 hypothetical protein YP_004215250.1 KEGG: enc:ECL_01302 predicted antirepressor protein Cro YP_004215251.1 KEGG: efe:EFER_2722 regulatory protein CI from bacteriophage origin; PFAM: Peptidase S24/S26A/S26B, conserved region; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004215252.1 KEGG: nhl:Nhal_1914 HicA protein YP_004215253.1 KEGG: nhl:Nhal_1915 HicB family protein YP_004215254.1 KEGG: npu:Npun_F3172 beta-ketoacyl synthase YP_004215255.1 KEGG: ecd:ECDH10B_1325 hypothetical protein YP_004215257.1 KEGG: epy:EpC_20820 hypothetical protein YP_004215258.1 KEGG: sgl:SG1561 hypothetical protein YP_004215259.1 PFAM: excisionase; KEGG: ecz:ECS88_1328 phage excisionase YP_004215260.1 PFAM: lambda integrase ; integrase family protein; KEGG: sgl:SG1699 phage integrase YP_004215261.1 PFAM: porin Gram-negative type; KEGG: ecz:ECS88_1492 outer membrane pore protein N, non-specific YP_004215262.1 KEGG: kva:Kvar_4083 hypothetical protein YP_004215263.1 KEGG: dze:Dd1591_0974 acetoin reductase; TIGRFAM: acetoin reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_004215264.1 KEGG: pam:PANA_0651 Rob; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004215265.1 PFAM: Tannase and feruloyl esterase; KEGG: ara:Arad_2086 tannase and feruloyl esterase YP_004215266.1 KEGG: pmr:PMI3460 lipoprotein YP_004215267.1 PFAM: protein of unknown function DUF323; Methyltransferase type 11; KEGG: ebi:EbC_00030 conserved uncharacterized protein YP_004215268.1 PFAM: integrase family protein; KEGG: pam:PANA_4235 IntA YP_004215269.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: pam:PANA_0296 Aer; SMART: chemotaxis sensory transducer YP_004215270.1 KEGG: ebi:EbC_17630 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004215271.1 KEGG: spe:Spro_1783 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: Uncharacterised conserved protein UCP028301 YP_004215272.1 KEGG: spe:Spro_1784 hypothetical protein; TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877 YP_004215273.1 KEGG: pay:PAU_03059 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876 YP_004215274.1 KEGG: ctu:Ctu_19310 hypothetical protein; TIGRFAM: type IV / VI secretion system protein, DotU family; PFAM: type IV / VI secretion system, DotU YP_004215275.1 PFAM: OmpA/MotB domain protein; KEGG: eay:EAM_0371 outer membrane protein YP_004215276.1 KEGG: ctu:Ctu_19330 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796 YP_004215277.1 TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: eay:EAM_0373 ATPase/chaperone; SMART: AAA ATPase YP_004215278.1 KEGG: ses:SARI_02626 hypothetical protein; TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; PFAM: Protein of unknown function DUF2345 YP_004215279.1 KEGG: ebi:EbC_03460 conserved uncharacterized protein YP_004215280.1 KEGG: ctu:Ctu_19400 hypothetical protein YP_004215281.1 KEGG: dac:Daci_0205 hypothetical protein YP_004215282.1 KEGG: sec:SC2148 hypothetical protein YP_004215283.1 KEGG: sew:SeSA_A3723 hypothetical protein YP_004215284.1 KEGG: ses:SARI_02623 hypothetical protein YP_004215285.1 KEGG: ses:SARI_02614 hypothetical protein YP_004215286.1 PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: ses:SARI_02612 hypothetical protein YP_004215287.1 KEGG: ses:SARI_02606 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879 YP_004215288.1 KEGG: eay:EAM_0382 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305 YP_004215289.1 TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: ses:SARI_02604 hypothetical protein YP_004215290.1 KEGG: ses:SARI_00371 hypothetical protein; TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; PFAM: Protein of unknown function DUF2345 YP_004215291.1 KEGG: kpn:KPN_03171 hypothetical protein YP_004215292.1 KEGG: ent:Ent638_2910 ImpA domain-containing protein YP_004215293.1 KEGG: ent:Ent638_2910 ImpA domain-containing protein YP_004215294.1 KEGG: ent:Ent638_2907 hypothetical protein YP_004215295.1 KEGG: ypz:YPZ3_1350 hypothetical protein; TIGRFAM: type VI secretion-associated protein, VC_A0119 family; PFAM: ImpA domain protein YP_004215296.1 KEGG: ypb:YPTS_1613 type VI secretion system lysozyme-related protein; TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein YP_004215298.1 KEGG: sei:SPC_0512 probable secreted protein YP_004215299.1 PFAM: ImpA domain protein; KEGG: ebi:EbC_04230 ImpA domain protein YP_004215300.1 KEGG: kpu:KP1_2422 hypothetical protein YP_004215301.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: yen:YE2471 cytochrome oxidase subunit YP_004215302.1 KEGG: pfl:PFL_5363 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II YP_004215303.1 PFAM: Protein of unknown function DUF2474; KEGG: spe:Spro_2861 hypothetical protein YP_004215304.1 PFAM: regulatory protein TetR; KEGG: pct:PC1_0829 transcriptional regulator, TetR family YP_004215305.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2687 major facilitator transporter YP_004215306.1 PFAM: extracellular solute-binding protein family 5; KEGG: ddc:Dd586_2914 extracellular solute-binding protein family 5 YP_004215307.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ddc:Dd586_2915 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase YP_004215308.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ddc:Dd586_2916 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase YP_004215309.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddd:Dda3937_00838 ABC transporter permease YP_004215310.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddc:Dd586_2918 binding-protein-dependent transport systems inner membrane component YP_004215311.1 KEGG: ddc:Dd586_2919 transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; SMART: regulatory protein LuxR YP_004215312.1 TIGRFAM: proline-specific peptidase; KEGG: ddd:Dda3937_00843 peptidase S33, tricorn interacting factor 1; PFAM: alpha/beta hydrolase fold YP_004215313.1 KEGG: ebi:EbC_pEb17201610 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004215314.1 PFAM: major facilitator superfamily MFS_1; KEGG: ent:Ent638_1531 major facilitator transporter YP_004215315.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: pam:PANA_3246 CydA YP_004215316.1 KEGG: pam:PANA_3245 CydB; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II YP_004215317.1 PFAM: Protein of unknown function DUF2474; KEGG: pam:PANA_3244 hypothetical protein YP_004215318.1 KEGG: ebi:EbC_35010 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004215319.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebi:EbC_35000 oxidoreductase YP_004215320.1 KEGG: ypy:YPK_2509 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; PFAM: fumarylacetoacetate (FAA) hydrolase YP_004215321.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ebi:EbC_34980 mandelate racemase/muconate lactonizing protein YP_004215322.1 PFAM: amidohydrolase 2; KEGG: ebi:EbC_34970 amidohydrolase 2 YP_004215323.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebi:EbC_34960 short chain dehydrogenase YP_004215324.1 PFAM: protein of unknown function DUF718; KEGG: ebi:EbC_34950 conserved uncharacterized protein YP_004215325.1 KEGG: ebi:EbC_34940 L-fucose transporter; TIGRFAM: L-fucose transporter; PFAM: major facilitator superfamily MFS_1 YP_004215326.1 PFAM: major facilitator superfamily MFS_1; KEGG: enc:ECL_02166 major facilitator transporter YP_004215327.1 KEGG: kva:Kvar_3220 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004215328.1 KEGG: kva:Kvar_3219 amino acid-binding ACT domain protein YP_004215329.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: kva:Kvar_3218 antibiotic biosynthesis monooxygenase YP_004215330.1 PFAM: hypothetical protein; KEGG: pam:PANA_1614 hypothetical protein YP_004215331.1 PFAM: Methionine synthase vitamin-B12 independent; KEGG: rme:Rmet_5073 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase YP_004215332.1 PFAM: YceI family protein; KEGG: ddd:Dda3937_02951 hypothetical protein YP_004215333.1 KEGG: aar:Acear_0937 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_004215334.1 PFAM: transcriptional regulator domain-containing protein; KEGG: ebi:EbC_17800 response regulator YP_004215335.1 KEGG: ebi:EbC_17810 hypothetical protein YP_004215336.1 PFAM: YfaZ family protein; KEGG: ent:Ent638_3392 YfaZ family protein YP_004215337.1 TIGRFAM: peptide methionine sulfoxide reductase; KEGG: bph:Bphy_5423 peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A YP_004215338.1 TIGRFAM: methionine-R-sulfoxide reductase; KEGG: bcj:BCAS0724 peptide methionine sulfoxide reductase family protein; PFAM: Methionine sulfoxide reductase B; Twin-arginine translocation pathway, signal sequence, subgroup YP_004215339.1 PFAM: glycoside hydrolase family 31; KEGG: ebi:EbC_00520 glycoside hydrolase, family 31 YP_004215340.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: ebi:EbC_00510 conserved uncharacterized protein YP_004215341.1 KEGG: enc:ECL_04084 transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004215342.1 KEGG: enc:ECL_01377 Hcp family type VI secretion system effector; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796 YP_004215343.1 KEGG: ctu:Ctu_22470 hypothetical protein YP_004215344.1 KEGG: ctp:CTRG_04817 similar to potential GABA-specific transport protein YP_004215345.1 TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; KEGG: set:SEN2882 isopentenyl-diphosphate delta-isomerase; PFAM: NUDIX hydrolase YP_004215346.1 PFAM: shikimate kinase; KEGG: kpe:KPK_2450 hypothetical protein YP_004215347.1 KEGG: pwa:Pecwa_2840 hypothetical protein YP_004215348.1 PFAM: Male sterility domain; KEGG: yen:YE1738 hypothetical protein YP_004215349.1 PFAM: helix-turn-helix HxlR type; KEGG: ypb:YPTS_2505 HxlR family transcriptional regulator YP_004215350.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: kva:Kvar_4034 antibiotic biosynthesis monooxygenase YP_004215351.1 PFAM: Amidohydrolase 3; KEGG: ebi:EbC_06450 amidohydrolase YP_004215352.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ent:Ent638_2291 LysR family transcriptional regulator YP_004215353.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ent:Ent638_2290 hypothetical protein YP_004215354.1 KEGG: ddd:Dda3937_04144 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_004215355.1 PFAM: YdjC family protein; KEGG: ent:Ent638_1711 hypothetical protein YP_004215356.1 PFAM: glycoside hydrolase family 4; KEGG: cko:CKO_01759 hypothetical protein YP_004215357.1 KEGG: ebd:ECBD_1910 DNA-binding transcriptional regulator ChbR; PFAM: helix-turn-helix- domain containing protein AraC type; cupin; SMART: Helix-turn-helix, AraC domain YP_004215358.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: cro:ROD_13201 N,N'-diacetylchitobiose-specific PTS system, EIIA component YP_004215359.1 TIGRFAM: PTS system, cellobiose-specific IIC subunit; PTS system, lactose/cellobiose family IIC subunit; KEGG: kva:Kvar_3083 PTS system, cellobiose-specific IIC subunit; PFAM: phosphotransferase system EIIC YP_004215360.1 KEGG: set:SEN1731 PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB; TIGRFAM: PTS system, lactose/cellobiose family IIB subunit; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit YP_004215361.1 KEGG: pct:PC1_0916 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_004215362.1 KEGG: ebi:EbC_11980 hypothetical protein YP_004215363.1 KEGG: ebi:EbC_11990 gluconate 2-dehydrogenase (acceptor) YP_004215364.1 KEGG: ebi:EbC_12000 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I YP_004215365.1 KEGG: ent:Ent638_1088 cytoplasmic protein YP_004215366.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3715 major facilitator transporter YP_004215367.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3714 LysR family transcriptional regulator YP_004215368.1 PFAM: GCN5-related N-acetyltransferase; KEGG: kva:Kvar_2751 GCN5-related N-acetyltransferase YP_004215369.1 KEGG: ebi:EbC_pEb17200660 conserved uncharacterized protein YP_004215370.1 KEGG: ebi:EbC_27680 hypothetical protein YP_004215371.1 KEGG: pam:PANA_4196 YmgB YP_004215372.1 KEGG: pam:PANA_1757 YmgB YP_004215373.1 KEGG: ebi:EbC_22990 diguanylate phosphodiesterase; PFAM: EAL domain protein; BLUF domain protein; SMART: EAL domain protein YP_004215374.1 TIGRFAM: tellurite resistance protein TehB; KEGG: spe:Spro_0987 tellurite resistance protein TehB YP_004215375.1 PFAM: protein of unknown function DUF883 ElaB; CsbD family protein; KEGG: enc:ECL_02069 hypothetical protein YP_004215376.1 KEGG: enc:ECL_01835 hypothetical protein YP_004215377.1 KEGG: spe:Spro_2343 hypothetical protein YP_004215378.1 PFAM: plasmid stabilization system; KEGG: ypg:YpAngola_0124 RelE/ParE family plasmid stabilization system protein YP_004215379.1 TIGRFAM: peroxiredoxin, OsmC subfamily; KEGG: epy:EpC_25320 osmotically inducible protein C; PFAM: OsmC family protein YP_004215380.1 KEGG: pam:PANA_2839 hypothetical protein YP_004215381.1 KEGG: pct:PC1_2083 steroid delta-isomerase domain-containing protein YP_004215382.1 KEGG: ebi:EbC_38620 hypothetical protein YP_004215383.1 KEGG: pam:PANA_0820 MetQ; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein YP_004215384.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_1381 major facilitator transporter YP_004215385.1 PFAM: small multidrug resistance protein; KEGG: eta:ETA_34040 DMT superfamily multiple drug (quaternary ammonium compounds) efflux pump YP_004215386.1 KEGG: dze:Dd1591_0099 hypothetical protein YP_004215387.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: dda:Dd703_0113 Orn/DAP/Arg decarboxylase 2 YP_004215388.1 KEGG: dze:Dd1591_0097 hypothetical protein YP_004215389.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; KEGG: cai:Caci_3263 3-oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein YP_004215390.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ddc:Dd586_0107 AMP-dependent synthetase and ligase YP_004215391.1 KEGG: ddc:Dd586_0106 hypothetical protein YP_004215392.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ddc:Dd586_0105 AMP-dependent synthetase and ligase YP_004215393.1 PFAM: AMP-dependent synthetase and ligase; KEGG: dze:Dd1591_0093 AMP-dependent synthetase and ligase YP_004215394.1 KEGG: ddc:Dd586_0103 hypothetical protein YP_004215395.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: dze:Dd1591_0091 acyl-CoA dehydrogenase domain protein YP_004215396.1 KEGG: dze:Dd1591_0090 hypothetical protein YP_004215397.1 KEGG: ddd:Dda3937_00967 hydrolase YP_004215398.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; KEGG: dze:Dd1591_0089 3-oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein YP_004215399.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: ddc:Dd586_0099 acyl-CoA dehydrogenase domain protein YP_004215400.1 KEGG: ddd:Dda3937_00958 hypothetical protein YP_004215401.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; KEGG: dze:Dd1591_0086 3-oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein YP_004215402.1 PFAM: cytochrome P450; KEGG: pla:Plav_0082 cytochrome P450 YP_004215403.1 PFAM: luciferase; KEGG: scl:sce2387 non-ribosomal peptide synthetase YP_004215404.1 KEGG: dze:Dd1591_0085 hypothetical protein YP_004215405.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: ddc:Dd586_0095 4'-phosphopantetheinyl transferase YP_004215406.1 KEGG: dda:Dd703_0098 histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004215407.1 KEGG: dda:Dd703_0097 two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase YP_004215408.1 KEGG: ddc:Dd586_0092 permease; TIGRFAM: permease; PFAM: protein of unknown function DUF214 YP_004215409.1 KEGG: dze:Dd1591_0080 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004215410.1 KEGG: cps:CPS_2118 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004215411.1 KEGG: dze:Dd1591_0079 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004215412.1 PFAM: alpha/beta hydrolase fold; KEGG: ddc:Dd586_0089 hypothetical protein YP_004215413.1 PFAM: multi antimicrobial extrusion protein MatE; KEGG: ddc:Dd586_0088 multi antimicrobial extrusion protein MatE YP_004215414.1 KEGG: dze:Dd1591_0076 hypothetical protein YP_004215415.1 KEGG: dze:Dd1591_0075 hypothetical protein YP_004215416.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; KEGG: dze:Dd1591_0074 3-oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein YP_004215417.1 KEGG: pct:PC1_0021 ABC transporter related; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004215418.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pwa:Pecwa_0020 binding-protein-dependent transport systems inner membrane component YP_004215419.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dda:Dd703_1444 binding-protein-dependent transport systems inner membrane component YP_004215420.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: dze:Dd1591_2617 inosine/uridine-preferring nucleoside hydrolase YP_004215421.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: pwa:Pecwa_0017 ribosylpyrimidine nucleosidase YP_004215422.1 PFAM: dihydrodipicolinate synthetase; KEGG: dda:Dd703_1441 dihydrodipicolinate synthetase YP_004215423.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA4426 extracellular solute-binding protein YP_004215424.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA4427 LysR family transcriptional regulator YP_004215425.1 TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone repeat-containing protein; KEGG: kpe:KPK_2398 quinate dehydrogenase (pyrroloquinoline-quinone); SMART: Pyrrolo-quinoline quinone beta-propeller repeat YP_004215426.1 KEGG: tau:Tola_3115 HipA N-terminal domain protein; TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein YP_004215427.1 KEGG: spe:Spro_0567 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004215428.1 KEGG: pwa:Pecwa_4253 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain-containing protein; SMART: regulatory protein GntR HTH YP_004215429.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pwa:Pecwa_4254 mandelate racemase/muconate lactonizing protein YP_004215430.1 manually curated; KEGG: pct:PC1_4064 phosphotransferase system EIIC; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_004215431.1 KEGG: cko:CKO_03358 hypothetical protein; PFAM: fumarylacetoacetate (FAA) hydrolase YP_004215432.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mno:Mnod_8309 transcriptional regulator, LysR family YP_004215433.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: kpu:KP1_3099 oligopeptide ABC transport system ATP-binding component; SMART: AAA ATPase YP_004215434.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: spe:Spro_2854 oligopeptide/dipeptide ABC transporter ATPase subunit; SMART: AAA ATPase YP_004215435.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kva:Kvar_2274 binding-protein-dependent transport systems inner membrane component YP_004215436.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpn:KPN_02020 oligopeptide ABC transporter, permease YP_004215437.1 PFAM: extracellular solute-binding protein family 5; KEGG: kva:Kvar_2276 extracellular solute-binding protein family 5 YP_004215438.1 PFAM: initiator RepB protein; KEGG: epy:EpC_pEp360280 plasmid replication protein YP_004215439.1 KEGG: epy:EpC_pEp360300 plasmid partitioning protein YP_004215440.1 KEGG: epy:EpC_pEp360310 plasmid partitioning protein YP_004215441.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; KEGG: ypz:YPZ3_2477 ABC-transporter ATP-binding protein; SMART: AAA ATPase YP_004215442.1 KEGG: ypy:YPK_1334 transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_004215443.1 KEGG: ypi:YpsIP31758_1218 4-aminobutyrate aminotransferase; TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III YP_004215444.1 PFAM: extracellular solute-binding protein family 1; KEGG: pct:PC1_2230 extracellular solute-binding protein family 1 YP_004215445.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_1220 spermidine/putrescine ABC transporter, permease protein YP_004215446.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypb:YPTS_2913 binding-protein-dependent transport systems inner membrane component YP_004215447.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pst:PSPTO_4082 oxidoreductase, short chain dehydrogenase/reductase family YP_004215448.1 PFAM: aminoglycoside phosphotransferase; KEGG: eca:ECA2059 phosphotransferase YP_004215449.1 PFAM: aminotransferase class-III; KEGG: pct:PC1_2224 aminotransferase class-III YP_004215450.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dda:Dd703_0577 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004215451.1 KEGG: pct:PC1_2179 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004215452.1 TIGRFAM: sugar transporter; KEGG: ebi:EbC_09090 probable metabolite transport protein YP_004215453.1 KEGG: enc:ECL_03864 anaerobic dimethyl sulfoxide reductase subunit A; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region YP_004215454.1 TIGRFAM: dimethylsulfoxide reductase, chain B; KEGG: sea:SeAg_B2681 dimethylsulfoxide reductase, chain B YP_004215455.1 PFAM: DMSO reductase anchor subunit (DmsC); KEGG: cro:ROD_34421 anaerobic reductase component YP_004215456.1 KEGG: cro:ROD_34431 polyferredoxin YP_004215458.1 KEGG: ebi:EbC_22580 short-chain alcohol dehydrogenase; PFAM: short-chain alcohol dehydrogenase YP_004215459.1 KEGG: esa:ESA_pESA3p05475 hypothetical protein YP_004215460.1 KEGG: ebi:EbC_21450 hypothetical protein YP_004215462.1 KEGG: ent:Ent638_1785 sugar-specific permease, SgaT/UlaA YP_004215463.1 PFAM: aldehyde Dehydrogenase; KEGG: pfl:PFL_3831 aldehyde dehydrogenase family protein YP_004215464.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pst:PSPTO_2661 transcriptional regulator, LysR family YP_004215465.1 KEGG: pam:PANA_1291 Hns; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS YP_004215466.1 KEGG: ddc:Dd586_3189 cytochrome b561 YP_004215467.1 KEGG: kva:Kvar_0973 hypothetical protein YP_004215468.1 PFAM: protein of unknown function DUF1493; KEGG: spq:SPAB_03607 hypothetical protein YP_004215469.1 KEGG: ses:SARI_00061 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796 YP_004215470.1 TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: ebi:EbC_21390 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_004215471.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: xne:XNC1_3841 restriction modification system DNA specificity domain:filamentation induced by cAMP protein Fic (fragment) YP_004215472.1 PFAM: inner-membrane translocator; KEGG: ent:Ent638_4073 inner-membrane translocator YP_004215473.1 PFAM: inner-membrane translocator; KEGG: ent:Ent638_4072 inner-membrane translocator YP_004215474.1 KEGG: kpu:KP1_0068 rhamnose ABC transport system ATP-binding component; PFAM: ABC transporter related; SMART: AAA ATPase YP_004215475.1 TIGRFAM: rhamnose ABC transporter, periplasmic rhamnose-binding protein; KEGG: ent:Ent638_4070 rhamnose ABC transporter, periplasmic rhamnose-binding protein YP_004215476.1 KEGG: ebi:EbC_20340 HTH-type transcriptional activator RhaS; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004215477.1 PFAM: aldehyde Dehydrogenase; KEGG: pct:PC1_4133 aldehyde dehydrogenase A YP_004215478.1 PFAM: protein of unknown function DUF162; KEGG: bmj:BMULJ_05703 hypothetical protein YP_004215479.1 KEGG: ddd:Dda3937_00950 hypothetical protein YP_004215480.1 KEGG: kpn:KPN_03171 hypothetical protein YP_004215481.1 KEGG: ent:Ent638_2907 hypothetical protein YP_004215482.1 KEGG: ebi:EbC_08990 hypothetical protein YP_004215483.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ebi:EbC_12090 outer membrane receptor YncD YP_004215484.1 SMART: Pyrrolo-quinoline quinone beta-propeller repeat; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; KEGG: spe:Spro_3100 quinoprotein glucose dehydrogenase; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone repeat-containing protein YP_004215485.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: cko:CKO_03886 hypothetical protein YP_004215486.1 KEGG: ebi:EbC_21500 transcriptional regulator, AraC family; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004215487.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cak:Caul_2398 short-chain dehydrogenase/reductase SDR YP_004215488.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ebi:EbC_21490 glyoxalase/bleomycin resistance protein/dioxygenase YP_004215489.1 PFAM: saccharopine dehydrogenase; KEGG: ebi:EbC_21480 saccharopine dehydrogenase family protein YP_004215490.1 PFAM: LysR substrate-binding; KEGG: pfs:PFLU4233 LysR-family transcriptional regulator YP_004215491.1 KEGG: eca:ECA2924 lipoprotein YP_004215492.1 KEGG: pna:Pnap_4946 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1272 YP_004215493.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mll3207 hypothetical protein YP_004215494.1 KEGG: hch:HCH_02020 transcriptional regulator YP_004215495.1 PFAM: major facilitator superfamily MFS_1; KEGG: esa:ESA_02053 hypothetical protein YP_004215496.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2417 LysR family transcriptional regulator YP_004215497.1 KEGG: esa:ESA_01397 exodeoxyribonuclease X; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_004215498.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: cro:ROD_22211 mandelate racemase/muconate lactonising enzyme YP_004215499.1 PFAM: extracellular solute-binding protein family 5; KEGG: ent:Ent638_2706 extracellular solute-binding protein YP_004215500.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ent:Ent638_2705 binding-protein-dependent transport systems inner membrane component YP_004215501.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ent:Ent638_2704 binding-protein-dependent transport systems inner membrane component YP_004215502.1 KEGG: kpu:KP1_3752 dipeptide ABC transport system ATP-binding component; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004215503.1 KEGG: kpe:KPK_1631 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004215504.1 KEGG: ebi:EbC_39410 conserved uncharacterized protein; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305 YP_004215505.1 KEGG: ebi:EbC_39400 type VI secretion protein, VCA0110 family; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879 YP_004215506.1 TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: ses:SARI_02713 hypothetical protein YP_004215507.1 PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: pay:PAU_03820 hypothetical protein YP_004215508.1 KEGG: rme:Rmet_0632 hypothetical protein YP_004215509.1 KEGG: kpn:KPN_02253 hypothetical protein YP_004215510.1 KEGG: tva:TVAG_339120 Dopey, N-terminal domain containing protein YP_004215511.1 KEGG: aas:Aasi_0854 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein YP_004215512.1 KEGG: rso:RSc1943 hypothetical protein YP_004215513.1 KEGG: azo:azo2942 hypothetical protein YP_004215514.1 KEGG: ebi:EbC_39330 type VI secretion system, rhs element Vgr protein; TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; PFAM: Protein of unknown function DUF2345 YP_004215515.1 KEGG: cby:CLM_2337 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; GCN5-related N-acetyltransferase; SMART: regulatory protein MarR YP_004215516.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pwa:Pecwa_1824 binding-protein-dependent transport systems inner membrane component YP_004215517.1 PFAM: extracellular solute-binding protein family 5; KEGG: pct:PC1_1425 extracellular solute-binding protein family 5 YP_004215518.1 PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_1426 major facilitator superfamily MFS_1 YP_004215519.1 KEGG: eca:ECA1551 ABC transporter ATP binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004215520.1 KEGG: pct:PC1_1428 ABC transporter related; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_004215521.1 TIGRFAM: D-fructose-responsive transcription factor; PFAM: regulatory protein LacI; KEGG: ctu:Ctu_04450 sucrose operon repressor; SMART: regulatory protein LacI YP_004215522.1 TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32 domain protein; KEGG: eca:ECA0361 sucrose-6-phosphate hydrolase; SMART: glycoside hydrolase family 32 YP_004215523.1 TIGRFAM: PTS system, sucrose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PTS system, maltose and glucose-specific subfamily, IIC subunit; KEGG: yen:YE0552 PTS system, sucrose-specific IIBC component; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_004215524.1 PFAM: porin LamB type; KEGG: yen:YE0553 sucrose porin YP_004215525.1 PFAM: PfkB domain protein; KEGG: ecp:ECP_2750 aminoimidazole riboside kinase YP_004215526.1 KEGG: sgl:SG1935 outer membrane protein assembly factor YaeT; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein YP_004215527.1 PFAM: Methionine sulfoxide reductase B; KEGG: slo:Shew_1591 bifunctional methionine sulfoxide reductase B/A protein YP_004215528.1 KEGG: enc:ECL_00053 multidrug efflux transport outer membrane protein EefC; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004215529.1 KEGG: kpn:KPN_04040 acridine efflux pump; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_004215530.1 KEGG: kva:Kvar_0061 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004215531.1 PFAM: transcriptional regulator PadR family protein; KEGG: ccs:CCNA_03805 transcriptional regulator YP_004215532.1 PFAM: protein of unknown function DUF330; KEGG: mei:Msip34_1971 protein of unknown function DUF330 YP_004215533.1 PFAM: hypothetical protein; KEGG: pct:PC1_1445 mammalian cell entry related domain protein YP_004215534.1 PFAM: Paraquat-inducible protein A; KEGG: mei:Msip34_1973 paraquat-inducible protein A YP_004215535.1 PFAM: Paraquat-inducible protein A; KEGG: mei:Msip34_1974 paraquat-inducible protein A YP_004215536.1 KEGG: ddd:Dda3937_00082 lipoprotein YP_004215537.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ebi:EbC_37650 TonB-dependent outer membrane receptor YP_004215538.1 PFAM: regulatory protein TetR; KEGG: epy:EpC_18270 TetR-family transcriptional regulator YP_004215539.1 PFAM: FAD-binding 9 siderophore-interacting domain protein; Siderophore-interacting protein; KEGG: efe:EFER_3022 siderophore interacting protein YP_004215540.1 KEGG: ebi:EbC_22520 transcriptional regulator, PadR family; manually curated; PFAM: transcriptional regulator PadR family protein YP_004215541.1 KEGG: mms:mma_0791 methionyl aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24 YP_004215542.1 KEGG: pna:Pnap_4817 hypothetical protein YP_004215543.1 KEGG: ebi:EbC_15870 conserved uncharacterized protein YP_004215544.1 TIGRFAM: pentapeptide MXKDX repeat protein; KEGG: dac:Daci_3133 pentapeptide MXKDX repeat-containing protein YP_004215545.1 PFAM: oxidoreductase molybdopterin binding; KEGG: spe:Spro_1510 oxidoreductase molybdopterin binding YP_004215546.1 KEGG: spe:Spro_1509 thiosulfate reductase cytochrome b subunit (membrane anchoring protein) YP_004215547.1 KEGG: spe:Spro_1508 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004215548.1 KEGG: spe:Spro_1507 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004215549.1 PFAM: carboxylyase; KEGG: enc:ECL_01944 3,4-dihydroxybenzoate decarboxylase YP_004215550.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pca:Pcar_2176 LysR family transcriptional regulator YP_004215551.1 PFAM: small multidrug resistance protein; KEGG: pap:PSPA7_3404 transporter YP_004215552.1 KEGG: spe:Spro_3692 transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004215553.1 PFAM: HipA domain protein; KEGG: spe:Spro_3691 HipA domain-containing protein YP_004215554.1 PFAM: protein of unknown function DUF1471; KEGG: pwa:Pecwa_2131 protein of unknown function DUF1471 YP_004215555.1 PFAM: protein of unknown function DUF1008; KEGG: yen:YE0333 hypothetical protein YP_004215556.1 KEGG: eic:NT01EI_1913 coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004215557.1 KEGG: sei:SPC_1747 hypothetical protein YP_004215558.1 PFAM: protein of unknown function DUF903; KEGG: ebi:EbC_44280 lipoprotein YP_004215559.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: eca:ECA0119 L-lactate dehydrogenase YP_004215560.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: seg:SG1195 predicted phage protein; SMART: GGDEF domain containing protein YP_004215561.1 KEGG: epy:EpC_05760 coenzyme PQQ synthesis protein F (pyrroloquinoline quinone biosynthesis protein F); TIGRFAM: coenzyme PQQ biosynthesis protein PqqF; PFAM: peptidase M16 domain protein YP_004215562.1 TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; KEGG: eta:ETA_28860 pyrroloquinoline quinone biosynthesis protein PqqE; SMART: Elongator protein 3/MiaB/NifB YP_004215563.1 KEGG: ebi:EbC_37740 pyrroloquinoline quinone biosynthesis protein D YP_004215564.1 PFAM: TENA/THI-4 domain-containing protein; manually curated; KEGG: ebi:EbC_37730 pyrroloquinoline quinone biosynthesis protein C; TIGRFAM: coenzyme PQQ biosynthesis protein C YP_004215565.1 TIGRFAM: coenzyme PQQ biosynthesis protein B; KEGG: ebi:EbC_37720 pyrroloquinoline quinone biosynthesis protein B YP_004215566.1 manually curated; TIGRFAM: coenzyme PQQ biosynthesis protein A; KEGG: cps:CPS_0862 coenzyme PQQ biosynthesis protein A; PFAM: coenzyme PQQ biosynthesis protein A YP_004215567.1 KEGG: ebi:EbC_37710 Zn-dependent dipeptidase; PFAM: peptidase M19 renal dipeptidase YP_004215568.1 KEGG: ebi:EbC_11400 FhuE receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_004215569.1 PFAM: homocysteine S-methyltransferase; KEGG: dze:Dd1591_3747 homocysteine S-methyltransferase YP_004215570.1 PFAM: extracellular solute-binding protein family 5; KEGG: ddd:Dda3937_01275 ABC transporter periplasmic binding-protein YP_004215571.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddd:Dda3937_01276 ABC transporter permease YP_004215572.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dze:Dd1591_3744 binding-protein-dependent transport systems inner membrane component YP_004215573.1 KEGG: ddc:Dd586_0365 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase YP_004215574.1 KEGG: ebi:EbC_38940 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004215575.1 KEGG: cro:ROD_12321 beta-lactamase; PFAM: beta-lactamase YP_004215576.1 KEGG: ppw:PputW619_2062 hypothetical protein YP_004215577.1 KEGG: pwa:Pecwa_2355 diaminobutyrate--2-oxoglutarate aminotransferase; TIGRFAM: 2,4-diaminobutyrate 4-transaminase; PFAM: aminotransferase class-III YP_004215578.1 PFAM: Pyridoxal-dependent decarboxylase; KEGG: spe:Spro_2418 pyridoxal-dependent decarboxylase YP_004215579.1 PFAM: MscS Mechanosensitive ion channel; KEGG: enc:ECL_02262 inner membrane protein YP_004215580.1 TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; KEGG: esa:ESA_pESA3p05541 hypothetical protein; SMART: alpha amylase catalytic sub domain YP_004215581.1 TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; KEGG: ctu:Ctu_1p00990 malto-oligosyltrehalose trehalohydrolase; SMART: alpha amylase catalytic sub domain YP_004215582.1 KEGG: dth:DICTH_0353 GGDEF domain protein YP_004215583.1 PFAM: periplasmic binding protein; KEGG: spe:Spro_2539 periplasmic binding protein YP_004215584.1 PFAM: Glutathione S-transferase domain; KEGG: spe:Spro_0989 glutathione S-transferase domain-containing protein YP_004215585.1 PFAM: alpha/beta hydrolase fold; KEGG: spe:Spro_0990 alpha/beta hydrolase fold YP_004215586.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_0991 LysR family transcriptional regulator YP_004215587.1 KEGG: ses:SARI_00739 hypothetical protein; PFAM: 5TM Receptors of the LytS-YhcK type transmembrane region; GAF domain protein; histidine kinase internal region; ATP-binding region ATPase domain protein; SMART: GAF domain protein; ATP-binding region ATPase domain protein YP_004215588.1 KEGG: kpu:KP1_3786 two-component response-regulatory protein YehT; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver YP_004215589.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: kva:Kvar_4482 cobalamin synthesis protein P47K YP_004215590.1 PFAM: protein of unknown function DUF466; KEGG: eta:ETA_04980 cytoplasmic protein YP_004215591.1 PFAM: carbon starvation protein CstA; KEGG: ses:SARI_03048 hypothetical protein YP_004215592.1 PFAM: glycoside hydrolase family 1; KEGG: pct:PC1_1461 glycoside hydrolase family 1 YP_004215593.1 KEGG: kva:Kvar_3166 DNA-directed DNA polymerase; PFAM: UMUC domain protein DNA-repair protein YP_004215594.1 PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: kva:Kvar_3165 peptidase S24/S26A/S26B, conserved region YP_004215595.1 KEGG: ctu:Ctu_1p00740 hypothetical protein YP_004215596.1 KEGG: ddc:Dd586_2905 hypothetical protein YP_004215597.1 KEGG: ddc:Dd586_2906 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase YP_004215598.1 KEGG: ddc:Dd586_2907 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase YP_004215599.1 PFAM: inner-membrane translocator; KEGG: ddc:Dd586_2908 inner-membrane translocator YP_004215600.1 PFAM: inner-membrane translocator; KEGG: ddc:Dd586_2909 inner-membrane translocator YP_004215601.1 PFAM: Extracellular ligand-binding receptor; KEGG: ddc:Dd586_2910 extracellular ligand-binding receptor YP_004215602.1 KEGG: ddc:Dd586_2911 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004215603.1 TIGRFAM: amidohydrolase; KEGG: ddc:Dd586_2912 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004215604.1 TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: ddc:Dd586_2913 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_004215605.1 PFAM: ABC transporter; KEGG: ent:Ent638_1283 ABC transporter YP_004215606.1 PFAM: ABC transporter; KEGG: kva:Kvar_3560 ABC transporter YP_004215607.1 KEGG: sea:SeAg_B0852 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004215608.1 PFAM: secretion protein HlyD family protein; KEGG: enc:ECL_02940 HlyD family secretion protein YP_004215609.1 PFAM: TetR family transcriptional regulator ; regulatory protein TetR; KEGG: enc:ECL_02939 DNA-binding transcriptional regulator YP_004215610.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: asu:Asuc_0403 iron-containing alcohol dehydrogenase YP_004215611.1 PFAM: protein of unknown function DUF1486; KEGG: ebi:EbC_26010 hypothetical protein YP_004215612.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebi:EbC_26020 transcriptional regulator, LysR family YP_004215613.1 PFAM: aldo/keto reductase; KEGG: kpn:KPN_03272 aldo/keto reductase YP_004215614.1 PFAM: protein of unknown function DUF1493; KEGG: yen:YE2290 phage-associated acyl carrier protein YP_004215615.1 PFAM: glycosyl transferase family 9; KEGG: epy:EpC_00900 glycosyl transferase, family 9 YP_004215616.1 PFAM: glycosyl transferase family 9; KEGG: tye:THEYE_A0426 glycosyl transferase, family 9 YP_004215617.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebi:EbC_12050 transcriptional regulator, LysR family YP_004215618.1 PFAM: protein of unknown function DUF204; KEGG: epy:EpC_35850 hypothetical protein YP_004215619.1 KEGG: pay:PAU_02282 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: Uncharacterised conserved protein UCP028301 YP_004215620.1 KEGG: pay:PAU_02281 hypothetical protein; TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877 YP_004215621.1 PFAM: protein of unknown function DUF796; KEGG: pay:PAU_02280 hypothetical protein YP_004215622.1 PFAM: GPW/gp25 family protein; KEGG: pay:PAU_02279 hypothetical protein YP_004215623.1 KEGG: plu:plu2297 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879 YP_004215624.1 KEGG: pay:PAU_02277 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305 YP_004215625.1 TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; KEGG: pay:PAU_02276 hypothetical protein YP_004215626.1 KEGG: eck:EC55989_3291 hypothetical protein YP_004215627.1 PFAM: PAAR repeat-containing protein; KEGG: etr:ETAE_2438 type VI secretion system protein EvpJ YP_004215628.1 KEGG: eck:EC55989_3289 hypothetical protein; TIGRFAM: type VI secretion-associated protein, ImpA family; PFAM: ImpA domain protein YP_004215629.1 TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: pay:PAU_02272 hypothetical protein YP_004215630.1 KEGG: pay:PAU_02271 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876 YP_004215631.1 PFAM: type IV / VI secretion system, DotU; KEGG: eck:EC55989_3285 hypothetical protein YP_004215632.1 KEGG: pay:PAU_02269 hypothetical protein YP_004215633.1 TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: pay:PAU_02268 ClpA/B-type chaperone; SMART: AAA ATPase YP_004215634.1 KEGG: ypi:YpsIP31758_0805 ImpA domain-containing protein YP_004215635.1 KEGG: hde:HDEF_1405 RTX-family protein-18 YP_004215636.1 KEGG: ctu:Ctu_42080 potassium transport protein Kup; TIGRFAM: potassium uptake protein; PFAM: K potassium transporter YP_004215637.1 KEGG: ebi:EbC_22120 hypothetical protein YP_004215638.1 PFAM: beta-lactamase; KEGG: sit:TM1040_1900 beta-lactamase YP_004215639.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bph:Bphy_3323 glyoxalase/bleomycin resistance protein/dioxygenase YP_004215640.1 KEGG: yen:YE2511 hypothetical protein YP_004215641.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE2512 inner membrane protein YP_004215642.1 KEGG: yen:YE2513 hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_004215643.1 KEGG: dda:Dd703_3534 hypothetical protein YP_004215644.1 KEGG: dda:Dd703_3535 hypothetical protein YP_004215645.1 KEGG: eta:ETA_22020 transcriptional regulator; PFAM: iron dependent repressor; SMART: iron dependent repressor YP_004215646.1 PFAM: periplasmic solute binding protein; KEGG: spe:Spro_2133 periplasmic solute binding protein YP_004215647.1 KEGG: spe:Spro_2132 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004215648.1 PFAM: ABC transporter; KEGG: ypb:YPTS_2423 ABC transporter YP_004215649.1 PFAM: ABC transporter; KEGG: ddd:Dda3937_00373 manganese ABC transporter inner membrane permease SitD YP_004215650.1 KEGG: tac:Ta1473 hypothetical protein YP_004215651.1 KEGG: cko:CKO_02850 tryptophan permease; TIGRFAM: aromatic amino acid transporter; PFAM: Tryptophan/tyrosine permease YP_004215652.1 PFAM: Pirin domain protein; KEGG: ebi:EbC_pEb10200360 pirin domain protein YP_004215653.1 KEGG: spe:Spro_2529 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004215654.1 PFAM: lambda integrase ; integrase family protein; KEGG: sgl:SG1699 phage integrase YP_004215655.1 KEGG: ecz:ECS88_1328 phage excisionase YP_004215656.1 PFAM: Gp157 family protein; KEGG: epy:EpC_17420 conserved uncharacterized protein YP_004215657.1 KEGG: epy:EpC_17430 similarities with exodeoxyribonuclease VIII YP_004215658.1 KEGG: xce:Xcel_0917 extracellular solute-binding protein family 1 YP_004215659.1 KEGG: ere:EUBREC_1081 periplasmic alpha-amylase precursor YP_004215660.1 KEGG: bvu:BVU_0833 two-component system sensor histidine kinase YP_004215661.1 KEGG: bbr:BB4657 hemin binding protein YP_004215662.1 PFAM: helix-turn-helix domain protein; KEGG: set:SEN1383 predicted phage protein YP_004215663.1 KEGG: ecq:ECED1_1006 regulator of the C1 family (possibly fragment); PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004215664.1 PFAM: protein of unknown function DUF1019; KEGG: ecq:ECED1_1738 conserved hypothetical protein from phage origin YP_004215665.1 KEGG: brm:Bmur_1018 OmpA/MotB domain protein YP_004215667.1 KEGG: spq:SPAB_02260 hypothetical protein YP_004215668.1 KEGG: eoh:ECO103_1368 replication protein YP_004215669.1 KEGG: enc:ECL_01667 hypothetical protein YP_004215670.1 KEGG: etr:ETAE_1605 hypothetical protein YP_004215671.1 KEGG: sed:SeD_A2298 hypothetical protein YP_004215672.1 KEGG: lcz:LCAZH_2090 hypothetical protein YP_004215673.1 KEGG: cel:T21E3.3 Low-density lipoprotein Receptor Related family member (lrp-2) YP_004215674.1 KEGG: ecg:E2348C_2779 hypothetical protein YP_004215675.1 KEGG: pop:POPTR_920495 hypothetical protein YP_004215676.1 KEGG: eoh:ECO103_2873 hypothetical protein YP_004215677.1 KEGG: lpp:lpp1322 hypothetical protein YP_004215678.1 KEGG: cre:CHLREDRAFT_189109 flagellar associated protein YP_004215679.1 KEGG: mth:MTH1314 transcription elongation factor TFIIS YP_004215680.1 KEGG: mcc:696763 small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta YP_004215682.1 KEGG: ecy:ECSE_2236 hypothetical protein YP_004215683.1 PFAM: protein of unknown function DUF1367; KEGG: see:SNSL254_A1146 gifsy-2 prophage protein YP_004215684.1 KEGG: enc:ECL_01672 hypothetical protein YP_004215685.1 PFAM: antitermination Q family protein; KEGG: epy:EpC_17570 conserved phage protein YP_004215686.1 PFAM: Lysis S family protein; KEGG: yps:YPTB1804 holin protein YP_004215687.1 KEGG: sgl:SG1681 phage lysozyme lysis protein; PFAM: glycoside hydrolase family 24 YP_004215688.1 KEGG: spe:Spro_4928 hypothetical protein YP_004215689.1 KEGG: mno:Mnod_6525 hypothetical protein YP_004215690.1 KEGG: enc:ECL_03092 hypothetical protein; PFAM: Ig domain protein group 1 domain protein; SMART: Ig domain protein group 1 domain protein YP_004215691.1 KEGG: sty:STY2042 hypothetical protein YP_004215692.1 KEGG: ssn:SSON_0735 bacteriophage protein YP_004215693.1 PFAM: terminase large subunit; KEGG: see:SNSL254_A1154 GP33 TerL YP_004215694.1 TIGRFAM: phage-associated protein, HI1409 family; KEGG: ecr:ECIAI1_2646 hypothetical protein YP_004215695.1 KEGG: ecg:E2348C_2511 predicted head morphogenesis protein; TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; PFAM: head morphogenesis protein SPP1 gp7 YP_004215696.1 PFAM: Protein of unknown function DUF2213; KEGG: see:SNSL254_A1157 hypothetical protein YP_004215697.1 KEGG: see:SNSL254_A1158 bacteriophage protein YP_004215698.1 PFAM: Protein of unknown function DUF2184; KEGG: eok:G2583_3116 bacteriophage protein YP_004215699.1 KEGG: see:SNSL254_A1160 bacteriophage protein YP_004215700.1 KEGG: eoh:ECO103_3108 hypothetical protein YP_004215701.1 KEGG: spq:SPAB_02229 hypothetical protein YP_004215702.1 KEGG: ecg:E2348C_2504 hypothetical protein YP_004215703.1 KEGG: ent:Ent638_0805 bacteriophage protein YP_004215704.1 KEGG: spq:SPAB_02226 hypothetical protein YP_004215705.1 KEGG: spq:SPAB_02225 hypothetical protein YP_004215706.1 KEGG: spq:SPAB_02224 hypothetical protein YP_004215707.1 PFAM: Lytic transglycosylase catalytic; KEGG: see:SNSL254_A1168 lytic transglycosylase, catalytic YP_004215708.1 KEGG: stt:t1879 bacteriophage protein YP_004215709.1 KEGG: see:SNSL254_A1170 bacteriophage protein YP_004215710.1 KEGG: sec:SC2593 bacteriophage protein YP_004215711.1 KEGG: sec:SC2592 hypothetical protein YP_004215712.1 KEGG: rme:Rmet_5469 hypothetical protein YP_004215713.1 KEGG: spq:SPAB_02215 hypothetical protein YP_004215714.1 KEGG: sty:STY1069 bacteriophage protein YP_004215715.1 KEGG: sty:STY1070 bacteriophage protein YP_004215716.1 KEGG: stt:t1869 bacteriophage protein YP_004215717.1 KEGG: bcj:BCAL1560 hypothetical protein YP_004215718.1 KEGG: syr:SynRCC307_0619 Hep_Hag repeat-containing outer membrane protein YP_004215719.1 KEGG: bvi:Bcep1808_4560 hypothetical protein YP_004215720.1 PFAM: tail assembly chaperone gp38; KEGG: sfv:SFV_0255 phage tail fibre protein YP_004215721.1 KEGG: spe:Spro_2529 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004215722.1 PFAM: major facilitator superfamily MFS_1; KEGG: ebi:EbC_28800 major facilitator superfamily YP_004215723.1 PFAM: alpha/beta hydrolase fold; KEGG: ebi:EbC_25500 hydrolase YP_004215724.1 PFAM: regulatory protein TetR; KEGG: ebi:EbC_25490 transcriptional regulator YP_004215725.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebi:EbC_22310 short-chain dehydrogenase YP_004215727.1 KEGG: ent:Ent638_4271 hypothetical protein YP_004215728.1 KEGG: dda:Dd703_2719 hypothetical protein YP_004215729.1 PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: yen:YE2794 malate dehydrogenase YP_004215730.1 PFAM: Auxin Efflux Carrier; KEGG: kva:Kvar_1738 auxin efflux carrier YP_004215731.1 KEGG: enc:ECL_02274 fumarase; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region YP_004215732.1 KEGG: enc:ECL_03251 anion transporter; TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter YP_004215733.1 KEGG: dze:Dd1591_3495 flavocytochrome c; TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; NADH:flavin oxidoreductase/NADH oxidase; FMN-binding domain protein YP_004215734.1 PFAM: ApbE family lipoprotein; KEGG: ebi:EbC_17560 thiamine biosynthesis protein YP_004215735.1 KEGG: pam:PANA_4115 DcuR; PFAM: response regulator receiver; SMART: response regulator receiver YP_004215736.1 KEGG: ebi:EbC_17580 response regulator in two-component regulatory system with DcuR; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein YP_004215737.1 KEGG: esa:ESA_01130 hypothetical protein YP_004215738.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebi:EbC_12850 short-chain dehydrogenase/reductase YP_004215739.1 KEGG: oaa:100078598 similar to pheromone receptor V2R1b YP_004215741.1 PFAM: sugar isomerase (SIS); KEGG: cko:CKO_02841 hypothetical protein YP_004215742.1 KEGG: pam:PANA_4210 FoxA; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor YP_004215743.1 KEGG: pam:PANA_4209 YadT YP_004215744.1 KEGG: cro:ROD_03881 peptide transport protein; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region YP_004215745.1 TIGRFAM: arsenate reductase; KEGG: ect:ECIAI39_3995 arsenate reductase; PFAM: arsenate reductase and related YP_004215746.1 KEGG: ypy:YPK_3416 arsenical pump membrane protein; TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein YP_004215747.1 KEGG: enc:ECL_02869 arsenic-efflux pump regulatory protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004215748.1 PFAM: hypothetical protein; KEGG: rru:Rru_A0500 extracellular solute-binding protein YP_004215749.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_2135 binding-protein-dependent transport systems inner membrane component YP_004215750.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pde:Pden_0831 binding-protein-dependent transport systems inner membrane component YP_004215751.1 KEGG: mlo:mll3065 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004215753.1 TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: cvi:CV_0556 N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase YP_004215754.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bvi:Bcep1808_5096 LysR family transcriptional regulator YP_004215755.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: bcm:Bcenmc03_2497 NADP oxidoreductase coenzyme F420-dependent YP_004215756.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: vap:Vapar_1647 short-chain dehydrogenase/reductase SDR YP_004215757.1 PFAM: regulatory protein TetR; KEGG: bcm:Bcenmc03_2496 TetR family transcriptional regulator YP_004215759.1 SMART: helix-turn-helix domain protein; KEGG: ebd:ECBD_0718 transcriptional regulator, XRE family YP_004215760.1 KEGG: ebd:ECBD_0717 hypothetical protein YP_004215761.1 KEGG: xtr:100151729 homeobox A3 YP_004215762.1 KEGG: cim:CIMG_05876 hypothetical protein YP_004215763.1 PFAM: protein of unknown function DUF905; KEGG: kpn:KPN_pKPN4p07110 hypothetical protein YP_004215764.1 KEGG: sec:SC124 hypothetical protein YP_004215765.1 PFAM: antirestriction ArdA family protein; KEGG: kpn:KPN_pKPN5p08170 putative antirestriction protein YP_004215766.1 KEGG: stm:PSLT056 hypothetical protein YP_004215767.1 KEGG: etw:ECSP_6045 hypothetical protein YP_004215768.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: enc:ECL_A075 DNA methylase family protein YP_004215769.1 KEGG: ang:An01g08210 hypothetical protein YP_004215770.1 KEGG: ssc:396960 albumin YP_004215771.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ddd:Dda3937_00500 ISEch4 transposase YP_004215772.1 KEGG: ebi:EbC_pEb17201520 hypothetical protein YP_004215773.1 PFAM: Plasmid stability protein, StbB; KEGG: eay:EAM_P218 plasmid stability protein YP_004215774.1 TIGRFAM: parB-like partition protein; PFAM: ParB family protein; ParB domain protein nuclease; KEGG: esa:ESA_pESA3p05553 hypothetical protein; SMART: ParB domain protein nuclease YP_004215775.1 KEGG: ctu:Ctu_1p01110 plasmid partition protein A YP_004215776.1 KEGG: pfo:Pfl01_4635 addiction module toxin, Txe/YoeB; TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Addiction module toxin Txe/YoeB YP_004215777.1 TIGRFAM: prevent-host-death family protein; KEGG: etr:ETAE_1621 prevent-host-death protein YP_004215778.1 PFAM: initiator RepB protein; KEGG: yps:pYptb0001 plasmid replication protein YP_004215779.1 PFAM: LexA DNA-binding domain protein; KEGG: sgl:SG0619 hypothetical protein YP_004215780.1 KEGG: hde:HDEF_1039 hypothetical protein YP_004215781.1 PFAM: integrase; KEGG: ecv:APECO1_O1CoBM116 resolvase YP_004215782.1 KEGG: ebi:EbC_17740 transcriptional regulatory protein YP_004215783.1 PFAM: Fimbrial protein domain-containing protein; KEGG: ebi:EbC_11310 fimbrial major subunit YP_004215784.1 PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: eta:ETA_33020 fimbrial chaperone protein YP_004215785.1 KEGG: ebi:EbC_11330 outer membrane usher protein, fimbrial-like; manually curated; PFAM: fimbrial biogenesis outer membrane usher protein YP_004215786.1 PFAM: Fimbrial protein domain-containing protein; KEGG: ebi:EbC_11340 putative fimbrial subunit BcfE YP_004215787.1 PFAM: Fimbrial protein domain-containing protein; KEGG: ebi:EbC_11340 putative fimbrial subunit BcfE YP_004215788.1 KEGG: ebi:EbC_11350 hypothetical protein YP_004215789.1 KEGG: ent:Ent638_4206 outer membrane autotransporter; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; Pertactin YP_004215790.1 KEGG: rpd:RPD_4117 ATP phosphoribosyltransferase regulatory subunit YP_004215791.1 KEGG: cfa:609459 similar to Rho GTPase activating protein 20 YP_004215792.1 KEGG: ebi:EbC_35160 hypothetical protein YP_004215793.1 PFAM: transcriptional regulator domain-containing protein; KEGG: ebi:EbC_17740 transcriptional regulatory protein YP_004215794.1 manually curated; KEGG: ebi:EbC_17730 hypothetical protein YP_004215795.1 PFAM: hypothetical protein; KEGG: ebi:EbC_44280 putative lipoprotein YP_004215796.1 KEGG: ebi:EbC_44290 hypothetical protein YP_004215797.1 KEGG: xne:XNC1_1132 conserved hypothetical protein; putative exported protein YP_004215798.1 KEGG: eta:ETA_05480 hypothetical protein YP_004215800.1 KEGG: eta:ETA_05470 similar to nematicidal protein 2 YP_004215801.1 PFAM: transposase IS3/IS911 family protein; KEGG: ebi:EbC_27880 transposase OrfAB, subunit A YP_004215802.1 KEGG: ebi:EbC_44320 transposase; manually curated; PFAM: Integrase catalytic region YP_004215803.1 KEGG: ecv:APECO1_O1CoBM79 hypothetical protein YP_004215804.1 KEGG: ecv:APECO1_O1CoBM78 hypothetical protein YP_004215805.1 KEGG: eic:NT01EI_0264 hypothetical protein YP_004215806.1 KEGG: sty:HCM2.0029c hypothetical protein YP_004215807.1 KEGG: cro:ROD_p1471 hypothetical protein YP_004215808.1 PFAM: integrase; KEGG: enc:ECL_B094 putative resolvase YP_004215809.1 KEGG: bcq:BCQ_1338 hypothetical protein YP_004215810.1 manually curated; KEGG: ecc:c0290 hypothetical protein YP_004215811.1 KEGG: sty:HCM2.0044c hypothetical protein YP_004215812.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: har:HEAR1734 GGDEF domain-containing protein; SMART: GGDEF domain containing protein YP_004215813.1 KEGG: epy:EpC_35530 microcin H47 secretion ATP-binding protein; PFAM: peptidase C39 bacteriocin processing; ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase YP_004215814.1 PFAM: secretion protein HlyD family protein; KEGG: epy:EpC_35520 microcin H47 secretion protein YP_004215815.1 KEGG: cel:T12F5.3 Germ-Line Helicase family member (glh-4) YP_004215816.1 PFAM: abortive infection protein; KEGG: kpe:KPK_A0150 putative membrane-bound protease YP_004215817.1 PFAM: integrase; KEGG: efe:pEFER_0057 resolvase (protein D) YP_004215818.1 KEGG: efe:pEFER_0056 hypothetical protein, putative membrane transporter YP_004215819.1 KEGG: ctu:Ctu_08830 hypothetical protein YP_004215820.1 KEGG: ctu:Ctu_08840 hypothetical protein YP_004215821.1 KEGG: epy:EpC_07540 transposase subunit; manually curated; PFAM: Integrase catalytic region YP_004215822.1 PFAM: transposase IS3/IS911 family protein; KEGG: ent:Ent638_4321 transposase IS3/IS911 family protein YP_004215823.1 KEGG: ctu:Ctu_08840 hypothetical protein YP_004215824.1 KEGG: ppf:Pput_5029 hypothetical protein YP_004215825.1 PFAM: transposase Tn3 family protein; KEGG: ent:Ent638_4224 transposase Tn3 family protein YP_004215826.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: ent:Ent638_4223 resolvase domain-containing protein YP_004215827.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: kpe:KPK_B0009 oxidoreductase, short chain dehydrogenase/reductase family YP_004215828.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: kpe:KPK_B0010 oxidoreductase, short chain dehydrogenase/reductase family YP_004215829.1 PFAM: major facilitator superfamily MFS_1; KEGG: kpe:KPK_B0011 transporter, major facilitator family YP_004215830.1 KEGG: kpe:KPK_B0012 AraC family transcriptional regulator; PFAM: ThiJ/PfpI domain-containing protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004215831.1 KEGG: kva:Kvar_0071 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004215832.1 KEGG: esa:ESA_01868 hypothetical protein; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase YP_004215833.1 PFAM: major facilitator superfamily MFS_1; KEGG: kpn:KPN_01739 MFS family transporter YP_004215834.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA3634 LysR family transcriptional regulator YP_004215835.1 KEGG: ebi:EbC_pEb10200220 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004215836.1 PFAM: aldo/keto reductase; KEGG: ebi:EbC_pEb10200230 aldo/keto reductase family protein YP_004215837.1 PFAM: hypothetical protein; KEGG: dda:Dd703_2507 hypothetical protein YP_004215838.1 PFAM: integrase; KEGG: ecc:c0291 hypothetical protein YP_004215839.1 KEGG: ent:Ent638_3521 hypothetical protein YP_004215841.1 KEGG: avi:Avi_0566 hypothetical protein YP_004215842.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: ect:ECIAI39_4230 putative hexapeptide repeat acetyltransferase YP_004215843.1 PFAM: GCN5-related N-acetyltransferase; KEGG: kva:Kvar_2751 GCN5-related N-acetyltransferase YP_004215844.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebi:EbC_28550 LysR-family transcriptional regulator YP_004215845.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pwa:Pecwa_2379 alcohol dehydrogenase zinc-binding domain protein YP_004215846.1 KEGG: ddc:Dd586_1386 antibiotic biosynthesis monooxygenase; manually curated; PFAM: Antibiotic biosynthesis monooxygenase YP_004215847.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ebi:EbC_27920 GCN5-related N-acetyltransferase YP_004215848.1 PFAM: NUDIX hydrolase; KEGG: ctu:Ctu_1p00160 hypothetical protein YP_004215849.1 KEGG: bbt:BBta_0838 putative phenazine biosynthesis PhzC/PhzF protein; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein YP_004215850.1 KEGG: enc:ECL_A274 hypothetical protein YP_004215851.1 KEGG: rpf:Rpic12D_5167 hypothetical protein YP_004215852.1 KEGG: pay:PAU_02760 hypothetical protein YP_004215853.1 KEGG: ctu:Ctu_1p00360 hypothetical protein YP_004215854.1 KEGG: phu:Phum_PHUM040670 hypothetical protein YP_004215855.1 manually curated; TIGRFAM: addiction module toxin, Txe/YoeB family; KEGG: cyt:cce_4261 putative addiction module toxin, Txe/YoeB; PFAM: Addiction module toxin Txe/YoeB YP_004215856.1 TIGRFAM: prevent-host-death family protein; KEGG: etr:ETAE_1621 prevent-host-death protein YP_004215857.1 PFAM: integrase; KEGG: pam:PANA_4063 Cre YP_004215858.1 KEGG: eba:ebA2001 GCN5-related N-acetyltransferase YP_004215859.1 PFAM: hypothetical protein; KEGG: neu:NE1104 hypothetical protein YP_004215860.1 PFAM: abortive infection protein; KEGG: cko:CKO_01599 hypothetical protein YP_004215861.1 KEGG: kpe:KPK_3392 cyclic diguanylate phosphodiesterase (EAL) domain protein; PFAM: EAL domain protein; GAF domain protein; SMART: EAL domain protein; GAF domain protein YP_004215862.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pam:PANA_1601 YaeR YP_004215863.1 KEGG: ctu:Ctu_1p00360 hypothetical protein YP_004215864.1 PFAM: hypothetical protein; KEGG: bcm:Bcenmc03_6724 hypothetical protein YP_004215865.1 PFAM: major facilitator superfamily MFS_1; KEGG: rle:pRL80047 major facilitator transporter YP_004215866.1 PFAM: regulatory protein TetR; KEGG: rle:pRL80046 TetR family transcriptional regulatory protein YP_004215867.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: bur:Bcep18194_C7514 4-oxalocrotonate tautomerase YP_004215868.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: ngk:NGK_0275 hypothetical protein YP_004215869.1 PFAM: metallophosphoesterase; KEGG: bbt:BBta_1036 putative serine/threonine protein phosphatase YP_004215870.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: dfe:Dfer_5338 type I phosphodiesterase/nucleotide pyrophosphatase YP_004215871.1 KEGG: mlo:mlr5891 transcription regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR