-- dump date 20140620_022900 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_004210761.1 322830734 10215501 55..1446 1 NC_015061.1 TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: spe:Spro_0032 chromosomal replication initiation protein; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase; chromosomal replication initiator protein DnaA 1446 10215501 Rahaq_0001 Rahnella sp. Y9602 chromosomal replication initiator protein DnaA YP_004210761.1 55 D 741091 CDS YP_004210762.1 322830735 10210961 1451..2551 1 NC_015061.1 SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III, subunit beta; KEGG: spe:Spro_0033 DNA polymerase III subunit beta; PFAM: DNA polymerase III beta chain; DNA polymerase III subunit beta 2551 10210961 Rahaq_0002 Rahnella sp. Y9602 DNA polymerase III subunit beta YP_004210762.1 1451 D 741091 CDS YP_004210763.1 322830736 10210962 2679..3767 1 NC_015061.1 KEGG: spe:Spro_0034 recombination protein F; TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; DNA replication and repair protein RecF 3767 10210962 Rahaq_0003 Rahnella sp. Y9602 DNA replication and repair protein RecF YP_004210763.1 2679 D 741091 CDS YP_004210764.1 322830737 10210963 3787..6201 1 NC_015061.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA gyrase, B subunit; KEGG: spe:Spro_0035 DNA gyrase subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain-containing protein; DNA gyrase subunit B domain protein; DNA gyrase subunit B 6201 10210963 Rahaq_0004 Rahnella sp. Y9602 DNA gyrase subunit B YP_004210764.1 3787 D 741091 CDS YP_004210765.1 322830738 10210964 6345..7160 1 NC_015061.1 KEGG: pwa:Pecwa_0012 sugar phosphatase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase 7160 10210964 Rahaq_0005 Rahnella sp. Y9602 cof family hydrolase YP_004210765.1 6345 D 741091 CDS YP_004210766.1 322830739 10210965 7187..8449 1 NC_015061.1 KEGG: spe:Spro_0046 hypothetical protein; hypothetical protein 8449 10210965 Rahaq_0006 Rahnella sp. Y9602 hypothetical protein YP_004210766.1 7187 D 741091 CDS YP_004210767.1 322830740 10210966 complement(8492..8869) 1 NC_015061.1 PFAM: protein of unknown function DUF1375; KEGG: pct:PC1_0033 hypothetical protein; hypothetical protein 8869 10210966 Rahaq_0007 Rahnella sp. Y9602 hypothetical protein YP_004210767.1 8492 R 741091 CDS YP_004210768.1 322830741 10210967 9249..9659 1 NC_015061.1 PFAM: heat shock protein Hsp20; KEGG: ctu:Ctu_00530 heat shock protein IbpA; heat shock protein Hsp20 9659 10210967 Rahaq_0008 Rahnella sp. Y9602 heat shock protein Hsp20 YP_004210768.1 9249 D 741091 CDS YP_004210769.1 322830742 10210968 complement(9661..9756) 1 NC_015061.1 hypothetical protein 9756 10210968 Rahaq_0009 Rahnella sp. Y9602 hypothetical protein YP_004210769.1 9661 R 741091 CDS YP_004210770.1 322830743 10210969 9789..10223 1 NC_015061.1 PFAM: heat shock protein Hsp20; KEGG: eca:ECA4402 heat shock chaperone IbpB; heat shock protein Hsp20 10223 10210969 Rahaq_0010 Rahnella sp. Y9602 heat shock protein Hsp20 YP_004210770.1 9789 D 741091 CDS YP_004210771.1 322830744 10210970 complement(10402..11157) 1 NC_015061.1 KEGG: mpn:MPN083 hypothetical protein; hypothetical protein 11157 10210970 Rahaq_0011 Rahnella sp. Y9602 hypothetical protein YP_004210771.1 10402 R 741091 CDS YP_004210772.1 322830745 10210971 complement(11516..12766) 1 NC_015061.1 PFAM: aminotransferase class I and II; KEGG: ypi:YpsIP31758_4140 valine--pyruvate transaminase; class I and II aminotransferase 12766 10210971 Rahaq_0012 Rahnella sp. Y9602 class I and II aminotransferase YP_004210772.1 11516 R 741091 CDS YP_004210773.1 322830746 10210972 13018..14229 1 NC_015061.1 KEGG: hde:HDEF_1127 hypothetical protein; hypothetical protein 14229 10210972 Rahaq_0013 Rahnella sp. Y9602 hypothetical protein YP_004210773.1 13018 D 741091 CDS YP_004210774.1 322830747 10210973 complement(14297..15274) 1 NC_015061.1 KEGG: yen:YE4159 D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; gluconate 2-dehydrogenase 15274 10210973 Rahaq_0014 Rahnella sp. Y9602 gluconate 2-dehydrogenase YP_004210774.1 14297 R 741091 CDS YP_004210775.1 322830748 10210974 complement(15271..16563) 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_0058 major facilitator transporter; major facilitator superfamily protein 16563 10210974 Rahaq_0015 Rahnella sp. Y9602 major facilitator superfamily protein YP_004210775.1 15271 R 741091 CDS YP_004210776.1 322830749 10210975 complement(16607..17356) 1 NC_015061.1 PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: spe:Spro_0060 xylose isomerase domain-containing protein; xylose isomerase domain-containing protein TIM barrel 17356 10210975 Rahaq_0016 Rahnella sp. Y9602 xylose isomerase domain-containing protein TIM barrel YP_004210776.1 16607 R 741091 CDS YP_004210777.1 322830750 10210976 complement(17570..18604) 1 NC_015061.1 KEGG: spe:Spro_0061 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator 18604 10210976 Rahaq_0017 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004210777.1 17570 R 741091 CDS YP_004210778.1 322830751 10210977 complement(18672..19958) 1 NC_015061.1 TIGRFAM: oligosaccharide/H+ symporter, major facilitator superfamily (MFS); KEGG: ent:Ent638_4076 galactoside permease; oligosaccharide/H+ symporter, major facilitator superfamily (MFS) 19958 10210977 Rahaq_0018 Rahnella sp. Y9602 oligosaccharide/H+ symporter, major facilitator superfamily (MFS) YP_004210778.1 18672 R 741091 CDS YP_004210779.1 322830752 10210978 complement(20017..22143) 1 NC_015061.1 KEGG: ddc:Dd586_2554 glycoside hydrolase clan GH-D; PFAM: glycoside hydrolase clan GH-D; alpha-galactosidase 22143 10210978 Rahaq_0019 Rahnella sp. Y9602 alpha-galactosidase YP_004210779.1 20017 R 741091 CDS YP_004210780.1 322830753 10210979 complement(22284..23324) 1 NC_015061.1 KEGG: ent:Ent638_4078 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator 23324 10210979 Rahaq_0020 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004210780.1 22284 R 741091 CDS YP_004210781.1 322830754 10210980 complement(23395..24057) 1 NC_015061.1 PFAM: OmpA/MotB domain protein; KEGG: spe:Spro_0062 outer membrane lipoprotein; OmpA/MotB domain-containing protein 24057 10210980 Rahaq_0021 Rahnella sp. Y9602 OmpA/MotB domain-containing protein YP_004210781.1 23395 R 741091 CDS YP_004210782.1 322830755 10210981 complement(24279..24722) 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ypz:YPZ3_3495 acetyltransferase; N-acetyltransferase GCN5 24722 10210981 Rahaq_0022 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004210782.1 24279 R 741091 CDS YP_004210783.1 322830756 10210982 complement(24719..25291) 1 NC_015061.1 TIGRFAM: DNA-3-methyladenine glycosylase I; KEGG: ypb:YPTS_4132 DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I 25291 10210982 Rahaq_0023 Rahnella sp. Y9602 DNA-3-methyladenine glycosylase I YP_004210783.1 24719 R 741091 CDS YP_004210784.1 322830757 10210983 25483..27489 1 NC_015061.1 KEGG: spe:Spro_0065 outer membrane autotransporter; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; lipolytic protein G-D-S-L family; outer membrane autotransporter barrel domain-containing protein 27489 10210983 Rahaq_0024 Rahnella sp. Y9602 outer membrane autotransporter barrel domain-containing protein YP_004210784.1 25483 D 741091 CDS YP_004210785.1 322830758 10210984 27568..27816 1 NC_015061.1 KEGG: sea:SeAg_B1618 stability protein StbD; stability protein StbD 27816 10210984 Rahaq_0025 Rahnella sp. Y9602 stability protein StbD YP_004210785.1 27568 D 741091 CDS YP_004210786.1 322830759 10210985 27806..28090 1 NC_015061.1 KEGG: eic:NT01EI_2009 stability protein StbE; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; RelE/StbE family addiction module toxin 28090 10210985 Rahaq_0026 Rahnella sp. Y9602 RelE/StbE family addiction module toxin YP_004210786.1 27806 D 741091 CDS YP_004210787.1 322830760 10210986 28128..29126 1 NC_015061.1 TIGRFAM: glycyl-tRNA synthetase, subunit alpha; KEGG: eam:EAMY_3633 glycine tRNA synthetase, subunit alpha; PFAM: glycyl-tRNA synthetase subunit alpha; glycyl-tRNA synthetase subunit alpha 29126 10210986 Rahaq_0027 Rahnella sp. Y9602 glycyl-tRNA synthetase subunit alpha YP_004210787.1 28128 D 741091 CDS YP_004210788.1 322830761 10210987 29136..31205 1 NC_015061.1 TIGRFAM: glycyl-tRNA synthetase, subunit beta; KEGG: yen:YE4150 glycyl-tRNA synthetase subunit beta; glycyl-tRNA synthetase subunit beta 31205 10210987 Rahaq_0028 Rahnella sp. Y9602 glycyl-tRNA synthetase subunit beta YP_004210788.1 29136 D 741091 CDS YP_004210789.1 322830762 10210988 31416..32138 1 NC_015061.1 KEGG: spe:Spro_0071 hypothetical protein; hypothetical protein 32138 10210988 Rahaq_0029 Rahnella sp. Y9602 hypothetical protein YP_004210789.1 31416 D 741091 CDS YP_004210790.1 322830763 10210989 32316..33110 1 NC_015061.1 PFAM: DSBA oxidoreductase; KEGG: ypp:YPDSF_4128 hypothetical protein; DSBA oxidoreductase 33110 10210989 Rahaq_0030 Rahnella sp. Y9602 DSBA oxidoreductase YP_004210790.1 32316 D 741091 CDS YP_004210791.1 322830764 10210990 33345..33524 1 NC_015061.1 hypothetical protein 33524 10210990 Rahaq_0031 Rahnella sp. Y9602 hypothetical protein YP_004210791.1 33345 D 741091 CDS YP_004210792.1 322830765 10210991 33555..35099 1 NC_015061.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: vcj:VCD_000629 deoxycytidylate deaminase-related protein; CMP/dCMP deaminase zinc-binding protein 35099 10210991 Rahaq_0032 Rahnella sp. Y9602 CMP/dCMP deaminase zinc-binding protein YP_004210792.1 33555 D 741091 CDS YP_004210793.1 322830766 10210992 35587..37500 1 NC_015061.1 KEGG: spe:Spro_0072 PTS system mannitol-specific transporter subunit IIC; TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphotransferase system EIIC; phosphotransferase system lactose/cellobiose-specific IIB subunit; PTS system mannitol-specific transporter subunit IIC 37500 10210992 Rahaq_0033 Rahnella sp. Y9602 PTS system mannitol-specific transporter subunit IIC YP_004210793.1 35587 D 741091 CDS YP_004210794.1 322830767 10210993 37635..38783 1 NC_015061.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: spe:Spro_0073 mannitol-1-phosphate 5-dehydrogenase; mannitol dehydrogenase 38783 10210993 Rahaq_0034 Rahnella sp. Y9602 mannitol dehydrogenase YP_004210794.1 37635 D 741091 CDS YP_004210795.1 322830768 10210994 38734..39468 1 NC_015061.1 PFAM: Mannitol repressor; KEGG: spe:Spro_0074 mannitol repressor protein; mannitol repressor, MtlR 39468 10210994 Rahaq_0035 Rahnella sp. Y9602 mannitol repressor, MtlR YP_004210795.1 38734 D 741091 CDS YP_004210796.1 322830769 10210995 39494..39649 1 NC_015061.1 KEGG: dze:Dd1591_1426 hypothetical protein; hypothetical protein 39649 10210995 Rahaq_0036 Rahnella sp. Y9602 hypothetical protein YP_004210796.1 39494 D 741091 CDS YP_004210797.1 322830770 10210996 complement(39599..40207) 1 NC_015061.1 PFAM: lysine exporter protein (LYSE/YGGA); KEGG: yen:YE4145 inner membrane protein; lysine exporter protein LysE/YggA 40207 10210996 Rahaq_0037 Rahnella sp. Y9602 lysine exporter protein LysE/YggA YP_004210797.1 39599 R 741091 CDS YP_004210798.1 322830771 10210997 40352..41851 1 NC_015061.1 KEGG: spe:Spro_0076 transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 41851 10210997 Rahaq_0038 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004210798.1 40352 D 741091 CDS YP_004210799.1 322830772 10210998 41917..42276 1 NC_015061.1 KEGG: yen:YE4143 hypothetical protein; hypothetical protein 42276 10210998 Rahaq_0039 Rahnella sp. Y9602 hypothetical protein YP_004210799.1 41917 D 741091 CDS YP_004210800.1 322830773 10210999 complement(42448..43119) 1 NC_015061.1 PFAM: MOSC domain containing protein; 3-alpha domain protein; KEGG: spe:Spro_0079 hypothetical protein; MOSC domain-containing protein 43119 10210999 Rahaq_0040 Rahnella sp. Y9602 MOSC domain-containing protein YP_004210800.1 42448 R 741091 CDS YP_004210801.1 322830774 10211000 complement(43223..45169) 1 NC_015061.1 KEGG: spe:Spro_0080 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 45169 10211000 Rahaq_0041 Rahnella sp. Y9602 methyl-accepting chemotaxis sensory transducer YP_004210801.1 43223 R 741091 CDS YP_004210802.1 322830775 10211001 complement(45441..46061) 1 NC_015061.1 PFAM: Manganese/iron superoxide dismutase-like; KEGG: dda:Dd703_0072 superoxide dismutase; manganese/iron superoxide dismutase-like protein 46061 10211001 Rahaq_0042 Rahnella sp. Y9602 manganese/iron superoxide dismutase-like protein YP_004210802.1 45441 R 741091 CDS YP_004210803.1 322830776 10211002 complement(46272..47114) 1 NC_015061.1 KEGG: ypy:YPK_0036 formate dehydrogenase accessory protein; TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; formate dehydrogenase family accessory protein FdhD 47114 10211002 Rahaq_0043 Rahnella sp. Y9602 formate dehydrogenase family accessory protein FdhD YP_004210803.1 46272 R 741091 CDS YP_004210804.1 322830777 10211003 47260..50307 1 NC_015061.1 KEGG: pay:PAU_00744 FdnG, subunit alpha of formate dehydrogenase-N; TIGRFAM: formate dehydrogenase, subunit alpha; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; formate dehydrogenase subunit alpha 50307 10211003 Rahaq_0044 Rahnella sp. Y9602 formate dehydrogenase subunit alpha YP_004210804.1 47260 D 741091 CDS YP_004210805.1 322830778 10211004 50320..51231 1 NC_015061.1 KEGG: spe:Spro_0085 formate dehydrogenase subunit beta; TIGRFAM: formate dehydrogenase, subunit beta; PFAM: Formate dehydrogenase transmembrane domain protein; formate dehydrogenase subunit beta 51231 10211004 Rahaq_0045 Rahnella sp. Y9602 formate dehydrogenase subunit beta YP_004210805.1 50320 D 741091 CDS YP_004210806.1 322830779 10211005 51228..51881 1 NC_015061.1 TIGRFAM: formate dehydrogenase, subunit gamma; KEGG: ypy:YPK_0040 formate dehydrogenase-O subunit gamma; formate dehydrogenase subunit gamma 51881 10211005 Rahaq_0046 Rahnella sp. Y9602 formate dehydrogenase subunit gamma YP_004210806.1 51228 D 741091 CDS YP_004210807.1 322830780 10211006 51878..52783 1 NC_015061.1 KEGG: ypb:YPTS_4153 formate dehydrogenase accessory protein FdhE; TIGRFAM: formate dehydrogenase accessory protein FdhE; PFAM: formate dehydrogenase accessory protein; formate dehydrogenase accessory protein FdhE 52783 10211006 Rahaq_0047 Rahnella sp. Y9602 formate dehydrogenase accessory protein FdhE YP_004210807.1 51878 D 741091 CDS YP_004210808.1 322830781 10211007 52869..53510 1 NC_015061.1 PFAM: Glutathione S-transferase domain; KEGG: spe:Spro_0089 glutathione S-transferase; glutathione S-transferase 53510 10211007 Rahaq_0048 Rahnella sp. Y9602 glutathione S-transferase YP_004210808.1 52869 D 741091 CDS YP_004210809.1 322830782 10211008 53612..55150 1 NC_015061.1 PFAM: Aldehyde Dehydrogenase; KEGG: ect:ECIAI39_4105 aldehyde dehydrogenase B; aldehyde dehydrogenase 55150 10211008 Rahaq_0049 Rahnella sp. Y9602 aldehyde dehydrogenase YP_004210809.1 53612 D 741091 CDS YP_004210810.1 322830783 10211009 complement(55280..56518) 1 NC_015061.1 KEGG: spe:Spro_0092 major facilitator transporter; manually curated; PFAM: major facilitator superfamily MFS_1; major facilitator superfamily protein 56518 10211009 Rahaq_0050 Rahnella sp. Y9602 major facilitator superfamily protein YP_004210810.1 55280 R 741091 CDS YP_004210811.1 322830784 10211010 56754..57749 1 NC_015061.1 KEGG: ypy:YPK_0050 acyltransferase 3; acyltransferase 57749 10211010 Rahaq_0051 Rahnella sp. Y9602 acyltransferase YP_004210811.1 56754 D 741091 CDS YP_004210812.1 322830785 10211011 57781..58455 1 NC_015061.1 KEGG: vsp:VS_0293 hypothetical protein; hypothetical protein 58455 10211011 Rahaq_0052 Rahnella sp. Y9602 hypothetical protein YP_004210812.1 57781 D 741091 CDS YP_004210813.1 322830786 10211012 complement(58654..59568) 1 NC_015061.1 KEGG: yen:YE4125 transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain-containing protein; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 59568 10211012 Rahaq_0053 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004210813.1 58654 R 741091 CDS YP_004210814.1 322830787 10211013 complement(59604..60158) 1 NC_015061.1 PFAM: isochorismatase hydrolase; KEGG: yen:YE4124 isochorismatase family hydrolase; isochorismatase hydrolase 60158 10211013 Rahaq_0054 Rahnella sp. Y9602 isochorismatase hydrolase YP_004210814.1 59604 R 741091 CDS YP_004210815.1 322830788 10211014 complement(60290..60886) 1 NC_015061.1 PFAM: ThiJ/PfpI domain-containing protein; KEGG: eca:ECA0102 hypothetical protein; ThiJ/PfpI domain-containing protein 60886 10211014 Rahaq_0055 Rahnella sp. Y9602 ThiJ/PfpI domain-containing protein YP_004210815.1 60290 R 741091 CDS YP_004210816.1 322830789 10211015 complement(60974..62005) 1 NC_015061.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: dda:Dd703_0221 L-idonate 5-dehydrogenase; alcohol dehydrogenase 62005 10211015 Rahaq_0056 Rahnella sp. Y9602 alcohol dehydrogenase YP_004210816.1 60974 R 741091 CDS YP_004210817.1 322830790 10211016 complement(62128..63330) 1 NC_015061.1 KEGG: yen:YE1971 membrane transporter; TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; benzoate transporter 63330 10211016 Rahaq_0057 Rahnella sp. Y9602 benzoate transporter YP_004210817.1 62128 R 741091 CDS YP_004210818.1 322830791 10211017 63469..64035 1 NC_015061.1 KEGG: yen:YE1970 DNA-binding protein; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 64035 10211017 Rahaq_0058 Rahnella sp. Y9602 XRE family transcriptional regulator YP_004210818.1 63469 D 741091 CDS YP_004210819.1 322830792 10211018 64064..64516 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sgl:SG1755 acetyltransferase; N-acetyltransferase GCN5 64516 10211018 Rahaq_0059 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004210819.1 64064 D 741091 CDS YP_004210820.1 322830793 10211019 complement(64500..64982) 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mmw:Mmwyl1_1878 GCN5-like N-acetyltransferase; N-acetyltransferase GCN5 64982 10211019 Rahaq_0060 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004210820.1 64500 R 741091 CDS YP_004210821.1 322830794 10211020 complement(64997..65536) 1 NC_015061.1 KEGG: mea:Mex_1p4102 ABC transporter periplasmic protein; hypothetical protein 65536 10211020 Rahaq_0061 Rahnella sp. Y9602 hypothetical protein YP_004210821.1 64997 R 741091 CDS YP_004210822.1 322830795 10211021 65709..66338 1 NC_015061.1 PFAM: Glutathione S-transferase domain; KEGG: yen:YE1848 transferase; glutathione S-transferase 66338 10211021 Rahaq_0062 Rahnella sp. Y9602 glutathione S-transferase YP_004210822.1 65709 D 741091 CDS YP_004210823.1 322830796 10211022 complement(66330..66776) 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hch:HCH_01386 histone acetyltransferase HPA2-like acetyltransferase; N-acetyltransferase GCN5 66776 10211022 Rahaq_0063 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004210823.1 66330 R 741091 CDS YP_004210824.1 322830797 10211023 complement(66796..67431) 1 NC_015061.1 PFAM: lysine exporter protein (LYSE/YGGA); KEGG: pct:PC1_4180 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 67431 10211023 Rahaq_0064 Rahnella sp. Y9602 lysine exporter protein LysE/YggA YP_004210824.1 66796 R 741091 CDS YP_004210825.1 322830798 10211024 complement(67590..67847) 1 NC_015061.1 PFAM: protein of unknown function DUF1471; KEGG: spe:Spro_4435 hypothetical protein; hypothetical protein 67847 10211024 Rahaq_0065 Rahnella sp. Y9602 hypothetical protein YP_004210825.1 67590 R 741091 CDS YP_004210826.1 322830799 10211025 68251..68499 1 NC_015061.1 PFAM: Transglycosylase-associated protein; KEGG: spe:Spro_3521 hypothetical protein; transglycosylase 68499 10211025 Rahaq_0066 Rahnella sp. Y9602 transglycosylase YP_004210826.1 68251 D 741091 CDS YP_004210827.1 322830800 10211026 complement(68563..68946) 1 NC_015061.1 KEGG: pfl:PFL_2492 hypothetical protein; hypothetical protein 68946 10211026 Rahaq_0067 Rahnella sp. Y9602 hypothetical protein YP_004210827.1 68563 R 741091 CDS YP_004210828.1 322830801 10211027 complement(68946..69362) 1 NC_015061.1 KEGG: afr:AFE_0010 hypothetical protein; hypothetical protein 69362 10211027 Rahaq_0068 Rahnella sp. Y9602 hypothetical protein YP_004210828.1 68946 R 741091 CDS YP_004210829.1 322830802 10211028 complement(69596..70294) 1 NC_015061.1 TIGRFAM: urea ABC transporter ATP-binding protein UrtE; PFAM: ABC transporter related; KEGG: ebi:EbC_06330 ABC transporter subunit, ATP-binding subunit; SMART: AAA ATPase; urea ABC transporter ATP-binding protein 70294 10211028 Rahaq_0069 Rahnella sp. Y9602 urea ABC transporter ATP-binding protein YP_004210829.1 69596 R 741091 CDS YP_004210830.1 322830803 10211029 complement(70306..71103) 1 NC_015061.1 KEGG: spe:Spro_1424 ABC transporter-related protein; TIGRFAM: urea ABC transporter ATP-binding protein UrtD; PFAM: ABC transporter related; urea ABC transporter ATP-binding protein 71103 10211029 Rahaq_0070 Rahnella sp. Y9602 urea ABC transporter ATP-binding protein YP_004210830.1 70306 R 741091 CDS YP_004210831.1 322830804 10211030 complement(71103..72176) 1 NC_015061.1 KEGG: spe:Spro_1423 inner-membrane translocator; TIGRFAM: urea ABC transporter permease protein UrtC; PFAM: inner-membrane translocator; urea ABC transporter permease 72176 10211030 Rahaq_0071 Rahnella sp. Y9602 urea ABC transporter permease YP_004210831.1 71103 R 741091 CDS YP_004210832.1 322830805 10211031 complement(72176..73744) 1 NC_015061.1 KEGG: spe:Spro_1422 inner-membrane translocator; TIGRFAM: urea ABC transporter permease protein UrtB; PFAM: inner-membrane translocator; urea ABC transporter permease 73744 10211031 Rahaq_0072 Rahnella sp. Y9602 urea ABC transporter permease YP_004210832.1 72176 R 741091 CDS YP_004210833.1 322830806 10211032 complement(73885..75153) 1 NC_015061.1 KEGG: ebi:EbC_06370 ABC transporter subunit, substrate-binding (UrtA-like); TIGRFAM: urea ABC transporter urea binding protein; PFAM: Extracellular ligand-binding receptor; urea ABC transporter substrate-binding protein 75153 10211032 Rahaq_0073 Rahnella sp. Y9602 urea ABC transporter substrate-binding protein YP_004210833.1 73885 R 741091 CDS YP_004210834.1 322830807 10211033 complement(75223..75945) 1 NC_015061.1 KEGG: spe:Spro_1420 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 75945 10211033 Rahaq_0074 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004210834.1 75223 R 741091 CDS YP_004210835.1 322830808 10211034 complement(75974..79603) 1 NC_015061.1 TIGRFAM: urea carboxylase; urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; Allophanate hydrolase subunit 1; biotin/lipoyl attachment domain-containing protein; KEGG: spe:Spro_1419 UreA carboxylase; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; urea carboxylase 79603 10211034 Rahaq_0075 Rahnella sp. Y9602 urea carboxylase YP_004210835.1 75974 R 741091 CDS YP_004210836.1 322830809 10211035 complement(79613..81463) 1 NC_015061.1 KEGG: spe:Spro_1418 allophanate hydrolase; TIGRFAM: allophanate hydrolase; PFAM: Amidase; allophanate hydrolase 81463 10211035 Rahaq_0076 Rahnella sp. Y9602 allophanate hydrolase YP_004210836.1 79613 R 741091 CDS YP_004210837.1 322830810 10211036 81734..82195 1 NC_015061.1 KEGG: ecm:EcSMS35_0821 RelB/DinJ family addiction module antitoxin; RelB/DinJ family addiction module antitoxin 82195 10211036 Rahaq_0077 Rahnella sp. Y9602 RelB/DinJ family addiction module antitoxin YP_004210837.1 81734 D 741091 CDS YP_004210838.1 322830811 10211037 82199..82492 1 NC_015061.1 KEGG: rpi:Rpic_3179 addiction module toxin, RelE/StbE family; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; RelE/StbE family addiction module toxin 82492 10211037 Rahaq_0078 Rahnella sp. Y9602 RelE/StbE family addiction module toxin YP_004210838.1 82199 D 741091 CDS YP_004210839.1 322830812 10211038 82492..83937 1 NC_015061.1 KEGG: spe:Spro_0124 hypothetical protein; hypothetical protein 83937 10211038 Rahaq_0079 Rahnella sp. Y9602 hypothetical protein YP_004210839.1 82492 D 741091 CDS YP_004210840.1 322830813 10211039 84008..84466 1 NC_015061.1 KEGG: spe:Spro_0129 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator 84466 10211039 Rahaq_0080 Rahnella sp. Y9602 MarR family transcriptional regulator YP_004210840.1 84008 D 741091 CDS YP_004210841.1 322830814 10211040 84601..85023 1 NC_015061.1 KEGG: spe:Spro_0130 OsmC family protein; TIGRFAM: peroxiredoxin, Ohr subfamily; PFAM: OsmC family protein; Ohr subfamily peroxiredoxin 85023 10211040 Rahaq_0081 Rahnella sp. Y9602 Ohr subfamily peroxiredoxin YP_004210841.1 84601 D 741091 CDS YP_004210842.1 322830815 10211041 85295..86974 1 NC_015061.1 PFAM: sulfatase; protein of unknown function DUF1705; KEGG: spe:Spro_0131 phosphoethanolamine transferase; sulfatase 86974 10211041 Rahaq_0082 Rahnella sp. Y9602 sulfatase YP_004210842.1 85295 D 741091 CDS YP_004210843.1 322830816 10211043 complement(87418..87894) 1 NC_015061.1 KEGG: psa:PST_3459 hypothetical protein; hypothetical protein 87894 10211043 Rahaq_0083 Rahnella sp. Y9602 hypothetical protein YP_004210843.1 87418 R 741091 CDS YP_004210844.1 322830817 10211044 complement(87901..88245) 1 NC_015061.1 KEGG: amc:MADE_03514 HtaR suppressor protein; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein; AbrB family transcriptional regulator 88245 10211044 Rahaq_0084 Rahnella sp. Y9602 AbrB family transcriptional regulator YP_004210844.1 87901 R 741091 CDS YP_004210845.1 322830818 10211046 complement(88629..90008) 1 NC_015061.1 PFAM: MmgE/PrpD family protein; KEGG: ebi:EbC_07520 MmgE/PrpD family protein; MmgE/PrpD family protein 90008 10211046 Rahaq_0086 Rahnella sp. Y9602 MmgE/PrpD family protein YP_004210845.1 88629 R 741091 CDS YP_004210846.1 322830819 10211047 complement(90028..90807) 1 NC_015061.1 KEGG: ebi:EbC_07530 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 90807 10211047 Rahaq_0087 Rahnella sp. Y9602 ABC transporter YP_004210846.1 90028 R 741091 CDS YP_004210847.1 322830820 10211048 complement(90807..91673) 1 NC_015061.1 KEGG: ebi:EbC_07540 oligopeptide transport ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 91673 10211048 Rahaq_0088 Rahnella sp. Y9602 ABC transporter YP_004210847.1 90807 R 741091 CDS YP_004210848.1 322830821 10211049 complement(91666..92601) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_07550 ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 92601 10211049 Rahaq_0089 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004210848.1 91666 R 741091 CDS YP_004210849.1 322830822 10211050 complement(92598..93683) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_07560 ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 93683 10211050 Rahaq_0090 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004210849.1 92598 R 741091 CDS YP_004210850.1 322830823 10211051 complement(93713..95311) 1 NC_015061.1 PFAM: extracellular solute-binding protein family 5; KEGG: ebi:EbC_07570 ABC transporter periplasmic oligopeptide-binding protein; family 5 extracellular solute-binding protein 95311 10211051 Rahaq_0091 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004210850.1 93713 R 741091 CDS YP_004210851.1 322830824 10211052 complement(95545..96984) 1 NC_015061.1 KEGG: ebi:EbC_07580 aminobenzoyl-glutamate utilization family protein; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 96984 10211052 Rahaq_0092 Rahnella sp. Y9602 amidohydrolase YP_004210851.1 95545 R 741091 CDS YP_004210852.1 322830825 10211053 complement(97242..98168) 1 NC_015061.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ebi:EbC_07590 transcriptional regulator, LysR family; LysR family transcriptional regulator 98168 10211053 Rahaq_0093 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004210852.1 97242 R 741091 CDS YP_004210853.1 322830826 10211054 98897..100504 1 NC_015061.1 PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE4083 periplasmic dipeptide transport protein; family 5 extracellular solute-binding protein 100504 10211054 Rahaq_0094 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004210853.1 98897 D 741091 CDS YP_004210854.1 322830827 10211055 100705..101724 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE4082 dipeptide transporter permease DppB; binding-protein-dependent transport system inner membrane protein 101724 10211055 Rahaq_0095 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004210854.1 100705 D 741091 CDS YP_004210855.1 322830828 10211056 101735..102649 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pct:PC1_0046 dipeptide transporter; binding-protein-dependent transport system inner membrane protein 102649 10211056 Rahaq_0096 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004210855.1 101735 D 741091 CDS YP_004210856.1 322830829 10211057 102660..103685 1 NC_015061.1 TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: kpu:KP1_5242 dipeptide transporter ATP-binding subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 103685 10211057 Rahaq_0097 Rahnella sp. Y9602 oligopeptide/dipeptide ABC transporter ATPase YP_004210856.1 102660 D 741091 CDS YP_004210857.1 322830830 10211058 103675..104697 1 NC_015061.1 TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: esa:ESA_04197 dipeptide transporter ATP-binding subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 104697 10211058 Rahaq_0098 Rahnella sp. Y9602 oligopeptide/dipeptide ABC transporter ATPase YP_004210857.1 103675 D 741091 CDS YP_004210858.1 322830831 10211059 104806..105810 1 NC_015061.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ddd:Dda3937_00500 ISEch4 transposase; transposase IS116/IS110/IS902 family protein 105810 10211059 Rahaq_0099 Rahnella sp. Y9602 transposase IS116/IS110/IS902 family protein YP_004210858.1 104806 D 741091 CDS YP_004210859.1 322830832 10211060 complement(106104..106712) 1 NC_015061.1 KEGG: vei:Veis_0004 mobile mystery protein B; TIGRFAM: mobile mystery protein B; PFAM: filamentation induced by cAMP protein Fic; mobile mystery protein B 106712 10211060 Rahaq_0100 Rahnella sp. Y9602 mobile mystery protein B YP_004210859.1 106104 R 741091 CDS YP_004210860.1 322830833 10211061 complement(106709..107176) 1 NC_015061.1 TIGRFAM: mobile mystery protein A; PFAM: helix-turn-helix domain protein; KEGG: dap:Dacet_0535 transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein; mobile mystery protein A 107176 10211061 Rahaq_0101 Rahnella sp. Y9602 mobile mystery protein A YP_004210860.1 106709 R 741091 CDS YP_004210861.1 322830834 10211062 complement(107367..108380) 1 NC_015061.1 PFAM: glycoside hydrolase family 8; KEGG: dze:Dd1591_4079 cellulase; glycoside hydrolase 108380 10211062 Rahaq_0102 Rahnella sp. Y9602 glycoside hydrolase YP_004210861.1 107367 R 741091 CDS YP_004210862.1 322830835 10211063 complement(108390..108869) 1 NC_015061.1 KEGG: ddd:Dda3937_01993 hypothetical protein; hypothetical protein 108869 10211063 Rahaq_0103 Rahnella sp. Y9602 hypothetical protein YP_004210862.1 108390 R 741091 CDS YP_004210863.1 322830836 10211064 complement(108888..112850) 1 NC_015061.1 PFAM: cellulose synthase operon C domain protein; KEGG: ebi:EbC_44000 cellulose synthase operon protein C; cellulose synthase operon C domain-containing protein 112850 10211064 Rahaq_0104 Rahnella sp. Y9602 cellulose synthase operon C domain-containing protein YP_004210863.1 108888 R 741091 CDS YP_004210864.1 322830837 10211065 complement(112933..115422) 1 NC_015061.1 PFAM: Cellulose synthase BcsB; KEGG: ebi:EbC_44010 cellulose synthase operon protein B; Cellulose synthase BcsB 115422 10211065 Rahaq_0105 Rahnella sp. Y9602 Cellulose synthase BcsB YP_004210864.1 112933 R 741091 CDS YP_004210865.1 322830838 10211066 complement(115419..117518) 1 NC_015061.1 KEGG: pam:PANA_0128 BcsA; TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ; cellulose synthase catalytic subunit 117518 10211066 Rahaq_0106 Rahnella sp. Y9602 cellulose synthase catalytic subunit YP_004210865.1 115419 R 741091 CDS YP_004210866.1 322830839 10211067 complement(117549..118352) 1 NC_015061.1 TIGRFAM: cellulose synthase operon protein YhjQ; KEGG: ent:Ent638_3941 hypothetical protein; cellulose synthase operon protein YhjQ 118352 10211067 Rahaq_0107 Rahnella sp. Y9602 cellulose synthase operon protein YhjQ YP_004210866.1 117549 R 741091 CDS YP_004210867.1 322830840 10211068 complement(118343..119113) 1 NC_015061.1 KEGG: ebi:EbC_44040 hypothetical protein; hypothetical protein 119113 10211068 Rahaq_0108 Rahnella sp. Y9602 hypothetical protein YP_004210867.1 118343 R 741091 CDS YP_004210868.1 322830841 10211069 119673..121655 1 NC_015061.1 KEGG: spe:Spro_0152 phosphodiesterase; PFAM: EAL domain protein; histidine kinase HAMP region domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase with extracellular sensor 121655 10211069 Rahaq_0109 Rahnella sp. Y9602 diguanylate cyclase/phosphodiesterase with extracellular sensor YP_004210868.1 119673 D 741091 CDS YP_004210869.1 322830842 10211070 121892..123175 1 NC_015061.1 PFAM: sodium:dicarboxylate symporter; KEGG: yen:YE4067 C4-dicarboxylate transporter DctA; sodium:dicarboxylate symporter 123175 10211070 Rahaq_0110 Rahnella sp. Y9602 sodium:dicarboxylate symporter YP_004210869.1 121892 D 741091 CDS YP_004210870.1 322830843 10211071 123502..125016 1 NC_015061.1 PFAM: peptidase M16 domain protein; KEGG: yen:YE4066 insulinase family protease; peptidase M16 domain-containing protein 125016 10211071 Rahaq_0111 Rahnella sp. Y9602 peptidase M16 domain-containing protein YP_004210870.1 123502 D 741091 CDS YP_004210871.1 322830844 10211072 complement(125189..126127) 1 NC_015061.1 PFAM: PfkB domain protein; KEGG: yen:YE4065 2-dehydro-3-deoxygluconokinase; PfkB domain-containing protein 126127 10211072 Rahaq_0112 Rahnella sp. Y9602 PfkB domain-containing protein YP_004210871.1 125189 R 741091 CDS YP_004210872.1 322830845 10211073 complement(126321..126524) 1 NC_015061.1 KEGG: ypi:YpsIP31758_4060 4-oxalocrotonate tautomerase; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 126524 10211073 Rahaq_0113 Rahnella sp. Y9602 4-oxalocrotonate tautomerase YP_004210872.1 126321 R 741091 CDS YP_004210873.1 322830846 10211074 126848..127624 1 NC_015061.1 KEGG: yen:YE4063 EAL domain-containing protein; PFAM: EAL domain protein; SMART: EAL domain protein; diguanylate phosphodiesterase 127624 10211074 Rahaq_0114 Rahnella sp. Y9602 diguanylate phosphodiesterase YP_004210873.1 126848 D 741091 CDS YP_004210874.1 322830847 10211075 127836..129890 1 NC_015061.1 PFAM: AsmA family protein; KEGG: spe:Spro_4747 AsmA family protein; AsmA family protein 129890 10211075 Rahaq_0115 Rahnella sp. Y9602 AsmA family protein YP_004210874.1 127836 D 741091 CDS YP_004210875.1 322830848 10211076 complement(129940..130710) 1 NC_015061.1 KEGG: spe:Spro_4746 CDP-diacylglycerol pyrophosphatase; PFAM: CDP-diacylglycerol pyrophosphatase; CDP-diacylglycerol diphosphatase 130710 10211076 Rahaq_0116 Rahnella sp. Y9602 CDP-diacylglycerol diphosphatase YP_004210875.1 129940 R 741091 CDS YP_004210876.1 322830849 10211077 complement(130770..132092) 1 NC_015061.1 TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); KEGG: spe:Spro_4745 major facilitator superfamily metabolite/H(+) symporter; metabolite/H+ symporter, major facilitator superfamily (MFS) 132092 10211077 Rahaq_0117 Rahnella sp. Y9602 metabolite/H+ symporter, major facilitator superfamily (MFS) YP_004210876.1 130770 R 741091 CDS YP_004210877.1 322830850 10211078 complement(132380..133504) 1 NC_015061.1 KEGG: spe:Spro_4744 ribonuclease; TIGRFAM: ribonuclease; PFAM: ribonuclease BN; ribonuclease 133504 10211078 Rahaq_0118 Rahnella sp. Y9602 ribonuclease YP_004210877.1 132380 R 741091 CDS YP_004210878.1 322830851 10211079 complement(133589..134530) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebi:EbC_01350 O-succinylbenzoate synthase; LysR family transcriptional regulator 134530 10211079 Rahaq_0119 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004210878.1 133589 R 741091 CDS YP_004210879.1 322830852 10211080 134615..135373 1 NC_015061.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebi:EbC_01360 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 135373 10211080 Rahaq_0120 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004210879.1 134615 D 741091 CDS YP_004210880.1 322830853 10211081 complement(135377..136123) 1 NC_015061.1 PFAM: YcgR family protein; type IV pilus assembly PilZ; KEGG: ypb:YPTS_0948 YcgR family protein; hypothetical protein 136123 10211081 Rahaq_0121 Rahnella sp. Y9602 hypothetical protein YP_004210880.1 135377 R 741091 CDS YP_004210881.1 322830854 10211082 136455..137033 1 NC_015061.1 KEGG: pam:PANA_1606 YceJ; cytochrome B561 137033 10211082 Rahaq_0122 Rahnella sp. Y9602 cytochrome B561 YP_004210881.1 136455 D 741091 CDS YP_004210882.1 322830855 10211083 137065..137607 1 NC_015061.1 KEGG: spe:Spro_4454 TPR repeat-containing protein; hypothetical protein 137607 10211083 Rahaq_0123 Rahnella sp. Y9602 hypothetical protein YP_004210882.1 137065 D 741091 CDS YP_004210883.1 322830856 10211084 137688..138143 1 NC_015061.1 KEGG: ent:Ent638_3117 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; ECF subfamily RNA polymerase sigma-24 subunit 138143 10211084 Rahaq_0124 Rahnella sp. Y9602 ECF subfamily RNA polymerase sigma-24 subunit YP_004210883.1 137688 D 741091 CDS YP_004210884.1 322830857 10211085 138140..138916 1 NC_015061.1 KEGG: spe:Spro_4456 transmembrane anti-sigma factor; transmembrane anti-sigma factor 138916 10211085 Rahaq_0125 Rahnella sp. Y9602 transmembrane anti-sigma factor YP_004210884.1 138140 D 741091 CDS YP_004210885.1 322830858 10211086 139223..140872 1 NC_015061.1 TIGRFAM: malate/quinone oxidoreductase; KEGG: enc:ECL_03512 malate:quinone oxidoreductase; PFAM: Malate:quinone-oxidoreductase; malate/quinone oxidoreductase 140872 10211086 Rahaq_0126 Rahnella sp. Y9602 malate/quinone oxidoreductase YP_004210885.1 139223 D 741091 CDS YP_004210886.1 322830859 10211088 141405..142868 1 NC_015061.1 KEGG: kpn:KPN_03171 hypothetical protein; hypothetical protein 142868 10211088 Rahaq_0128 Rahnella sp. Y9602 hypothetical protein YP_004210886.1 141405 D 741091 CDS YP_004210887.1 322830860 10211089 142868..143920 1 NC_015061.1 KEGG: ent:Ent638_2910 ImpA domain-containing protein; ImpA domain-containing protein 143920 10211089 Rahaq_0129 Rahnella sp. Y9602 ImpA domain-containing protein YP_004210887.1 142868 D 741091 CDS YP_004210888.1 322830861 10211091 144330..144851 1 NC_015061.1 KEGG: ctu:Ctu_27030 hypothetical protein; hypothetical protein 144851 10211091 Rahaq_0131 Rahnella sp. Y9602 hypothetical protein YP_004210888.1 144330 D 741091 CDS YP_004210889.1 322830862 10211092 144854..146644 1 NC_015061.1 PFAM: Protein of unknown function DUF2235; KEGG: ctu:Ctu_27040 hypothetical protein; hypothetical protein 146644 10211092 Rahaq_0132 Rahnella sp. Y9602 hypothetical protein YP_004210889.1 144854 D 741091 CDS YP_004210890.1 322830863 10211093 147025..148677 1 NC_015061.1 TIGRFAM: malate/quinone oxidoreductase; KEGG: spe:Spro_1524 malate:quinone oxidoreductase; PFAM: Malate:quinone-oxidoreductase; malate/quinone oxidoreductase 148677 10211093 Rahaq_0133 Rahnella sp. Y9602 malate/quinone oxidoreductase YP_004210890.1 147025 D 741091 CDS YP_004210891.1 322830864 10211094 complement(148770..150269) 1 NC_015061.1 PFAM: amino acid permease-associated region; KEGG: spe:Spro_1975 amino acid permease-associated region; amino acid permease 150269 10211094 Rahaq_0134 Rahnella sp. Y9602 amino acid permease YP_004210891.1 148770 R 741091 CDS YP_004210892.1 322830865 10211095 complement(150321..150773) 1 NC_015061.1 PFAM: Conserved hypothetical protein CHP00022; KEGG: spe:Spro_1974 cryptic beta-D-galactosidase subunit beta; hypothetical protein 150773 10211095 Rahaq_0135 Rahnella sp. Y9602 hypothetical protein YP_004210892.1 150321 R 741091 CDS YP_004210893.1 322830866 10211096 complement(150773..153829) 1 NC_015061.1 PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 42 domain 5 loop region; KEGG: spe:Spro_1973 cryptic beta-D-galactosidase subunit alpha; glycoside hydrolase 153829 10211096 Rahaq_0136 Rahnella sp. Y9602 glycoside hydrolase YP_004210893.1 150773 R 741091 CDS YP_004210894.1 322830867 10211097 complement(153964..155013) 1 NC_015061.1 KEGG: spe:Spro_1972 DNA-binding transcriptional repressor EbgR; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator 155013 10211097 Rahaq_0137 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004210894.1 153964 R 741091 CDS YP_004210895.1 322830868 10211098 155155..156237 1 NC_015061.1 KEGG: spe:Spro_1971 hypothetical protein; hypothetical protein 156237 10211098 Rahaq_0138 Rahnella sp. Y9602 hypothetical protein YP_004210895.1 155155 D 741091 CDS YP_004210896.1 322830869 10211099 156237..158618 1 NC_015061.1 KEGG: spe:Spro_1970 glycosyl hydrolase; glycosyl hydrolase 158618 10211099 Rahaq_0139 Rahnella sp. Y9602 glycosyl hydrolase YP_004210896.1 156237 D 741091 CDS YP_004210897.1 322830870 10211100 complement(159150..160403) 1 NC_015061.1 KEGG: pfl:PFL_0539 hydroxymethylpyrimidine transporter CytX; TIGRFAM: hydroxymethylpyrimidine transporter CytX; PFAM: permease for cytosine/purines uracil thiamine allantoin; hydroxymethylpyrimidine transporter CytX 160403 10211100 Rahaq_0140 Rahnella sp. Y9602 hydroxymethylpyrimidine transporter CytX YP_004210897.1 159150 R 741091 CDS YP_004210898.1 322830871 10211101 complement(160560..161216) 1 NC_015061.1 KEGG: ddd:Dda3937_01264 hypothetical protein; hypothetical protein 161216 10211101 Rahaq_0141 Rahnella sp. Y9602 hypothetical protein YP_004210898.1 160560 R 741091 CDS YP_004210899.1 322830872 10211102 161404..163557 1 NC_015061.1 KEGG: spe:Spro_2306 peptidyl-dipeptidase DCP; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; peptidyl-dipeptidase Dcp 163557 10211102 Rahaq_0142 Rahnella sp. Y9602 peptidyl-dipeptidase Dcp YP_004210899.1 161404 D 741091 CDS YP_004210900.1 322830873 10211103 163695..164753 1 NC_015061.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; Ada metal-binding domain-containing protein; KEGG: dda:Dd703_0019 methylated-DNA/protein-cysteine methyltransferase; SMART: Helix-turn-helix, AraC domain; methylated-DNA--protein-cysteine methyltransferase 164753 10211103 Rahaq_0143 Rahnella sp. Y9602 methylated-DNA--protein-cysteine methyltransferase YP_004210900.1 163695 D 741091 CDS YP_004210901.1 322830874 10211104 164768..165520 1 NC_015061.1 KEGG: sme:SMc01727 hypothetical protein; hypothetical protein 165520 10211104 Rahaq_0144 Rahnella sp. Y9602 hypothetical protein YP_004210901.1 164768 D 741091 CDS YP_004210902.1 322830875 10211105 complement(165492..166706) 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_1571 major facilitator transporter; major facilitator superfamily protein 166706 10211105 Rahaq_0145 Rahnella sp. Y9602 major facilitator superfamily protein YP_004210902.1 165492 R 741091 CDS YP_004210903.1 322830876 10211106 complement(166778..166897) 1 NC_015061.1 hypothetical protein 166897 10211106 Rahaq_0146 Rahnella sp. Y9602 hypothetical protein YP_004210903.1 166778 R 741091 CDS YP_004210904.1 322830877 10211107 complement(166916..168001) 1 NC_015061.1 PFAM: protein of unknown function DUF450; KEGG: pmy:Pmen_3692 hypothetical protein; hypothetical protein 168001 10211107 Rahaq_0147 Rahnella sp. Y9602 hypothetical protein YP_004210904.1 166916 R 741091 CDS YP_004210905.1 322830878 10211108 complement(168145..168846) 1 NC_015061.1 PFAM: regulatory protein TetR; KEGG: spe:Spro_2481 TetR family transcriptional regulator; TetR family transcriptional regulator 168846 10211108 Rahaq_0148 Rahnella sp. Y9602 TetR family transcriptional regulator YP_004210905.1 168145 R 741091 CDS YP_004210906.1 322830879 10211109 168931..170430 1 NC_015061.1 KEGG: spe:Spro_2480 EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA subfamily drug resistance transporter 170430 10211109 Rahaq_0149 Rahnella sp. Y9602 EmrB/QacA subfamily drug resistance transporter YP_004210906.1 168931 D 741091 CDS YP_004210907.1 322830880 10211110 170533..172380 1 NC_015061.1 KEGG: ebi:EbC_43270 ABC transporter ATP-binding protein/permease protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 172380 10211110 Rahaq_0150 Rahnella sp. Y9602 ABC transporter YP_004210907.1 170533 D 741091 CDS YP_004210908.1 322830881 10211111 complement(172390..173517) 1 NC_015061.1 PFAM: protein of unknown function DUF482; KEGG: ebi:EbC_43250 conserved uncharacterized protein; hypothetical protein 173517 10211111 Rahaq_0151 Rahnella sp. Y9602 hypothetical protein YP_004210908.1 172390 R 741091 CDS YP_004210909.1 322830882 10211112 complement(173681..174316) 1 NC_015061.1 KEGG: pen:PSEEN3600 carbonic anhydrase; PFAM: carbonic anhydrase; carbonate dehydratase 174316 10211112 Rahaq_0152 Rahnella sp. Y9602 carbonate dehydratase YP_004210909.1 173681 R 741091 CDS YP_004210910.1 322830883 10211113 174537..175079 1 NC_015061.1 TIGRFAM: peptide methionine sulfoxide reductase; KEGG: pam:PANA_2239 MsrA; PFAM: methionine sulfoxide reductase A; peptide methionine sulfoxide reductase 175079 10211113 Rahaq_0153 Rahnella sp. Y9602 peptide methionine sulfoxide reductase YP_004210910.1 174537 D 741091 CDS YP_004210911.1 322830884 10211114 complement(175149..175331) 1 NC_015061.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: ara:Arad_4160 4-oxalocrotonate tautomerase protein; 4-oxalocrotonate tautomerase 175331 10211114 Rahaq_0154 Rahnella sp. Y9602 4-oxalocrotonate tautomerase YP_004210911.1 175149 R 741091 CDS YP_004210912.1 322830885 10211115 complement(175451..175756) 1 NC_015061.1 KEGG: ebi:EbC_37830 hypothetical protein; hypothetical protein 175756 10211115 Rahaq_0155 Rahnella sp. Y9602 hypothetical protein YP_004210912.1 175451 R 741091 CDS YP_004210913.1 322830886 10211116 complement(175777..177042) 1 NC_015061.1 KEGG: ebi:EbC_37840 PTS system, mannitol-specific EIIC component; PTS system, mannitol-specific EIIC component 177042 10211116 Rahaq_0156 Rahnella sp. Y9602 PTS system, mannitol-specific EIIC component YP_004210913.1 175777 R 741091 CDS YP_004210914.1 322830887 10211117 complement(177115..177417) 1 NC_015061.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: ebi:EbC_37850 PTS system, mannitol-specific EIIB component; PTS system lactose/cellobiose-specific transporter subunit IIB 177417 10211117 Rahaq_0157 Rahnella sp. Y9602 PTS system lactose/cellobiose-specific transporter subunit IIB YP_004210914.1 177115 R 741091 CDS YP_004210915.1 322830888 10211118 complement(177483..177926) 1 NC_015061.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: ebi:EbC_37870 PTS system, mannitol-specific EIIA component; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 177926 10211118 Rahaq_0158 Rahnella sp. Y9602 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_004210915.1 177483 R 741091 CDS YP_004210916.1 322830889 10211119 complement(178133..178729) 1 NC_015061.1 KEGG: ebi:EbC_37880 glucokinase; glucokinase 178729 10211119 Rahaq_0159 Rahnella sp. Y9602 glucokinase YP_004210916.1 178133 R 741091 CDS YP_004210917.1 322830890 10211120 complement(178722..179657) 1 NC_015061.1 PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: ebi:EbC_37890 tagatose-1,6-bisphosphate aldolase; deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase 179657 10211120 Rahaq_0160 Rahnella sp. Y9602 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_004210917.1 178722 R 741091 CDS YP_004210918.1 322830891 10211121 179891..180823 1 NC_015061.1 PFAM: sugar-binding domain-containing protein; regulatory protein MarR; KEGG: ebi:EbC_37900 transcriptional regulator; MarR family transcriptional regulator 180823 10211121 Rahaq_0161 Rahnella sp. Y9602 MarR family transcriptional regulator YP_004210918.1 179891 D 741091 CDS YP_004210919.1 322830892 10211122 181378..181746 1 NC_015061.1 KEGG: ebi:EbC_38620 hypothetical protein; hypothetical protein 181746 10211122 Rahaq_0162 Rahnella sp. Y9602 hypothetical protein YP_004210919.1 181378 D 741091 CDS YP_004210920.1 322830893 10211123 181743..184658 1 NC_015061.1 PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; KEGG: ent:Ent638_0982 peptidylprolyl isomerase, FKBP-type; FKBP-type peptidyl-prolyl isomerase domain-containing protein 184658 10211123 Rahaq_0163 Rahnella sp. Y9602 FKBP-type peptidyl-prolyl isomerase domain-containing protein YP_004210920.1 181743 D 741091 CDS YP_004210921.1 322830894 10211124 complement(184726..185547) 1 NC_015061.1 PFAM: alpha/beta hydrolase fold; KEGG: epy:EpC_35350 hydrolase, alpha/beta fold family; alpha/beta hydrolase 185547 10211124 Rahaq_0164 Rahnella sp. Y9602 alpha/beta hydrolase YP_004210921.1 184726 R 741091 CDS YP_004210922.1 322830895 10211125 185875..186516 1 NC_015061.1 PFAM: isochorismatase hydrolase; KEGG: kva:Kvar_4035 isochorismatase hydrolase; isochorismatase hydrolase 186516 10211125 Rahaq_0165 Rahnella sp. Y9602 isochorismatase hydrolase YP_004210922.1 185875 D 741091 CDS YP_004210923.1 322830896 10211126 186579..186998 1 NC_015061.1 PFAM: DoxX family protein; KEGG: cti:RALTA_B0391 conserved hypothetical protein; membrane protein, DoxX domain; DoxX family protein 186998 10211126 Rahaq_0166 Rahnella sp. Y9602 DoxX family protein YP_004210923.1 186579 D 741091 CDS YP_004210924.1 322830897 10211127 186995..188581 1 NC_015061.1 PFAM: protein of unknown function DUF894 DitE; KEGG: vap:Vapar_5468 protein of unknown function DUF894 DitE; hypothetical protein 188581 10211127 Rahaq_0167 Rahnella sp. Y9602 hypothetical protein YP_004210924.1 186995 D 741091 CDS YP_004210925.1 322830898 10211128 complement(188619..189527) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebd:ECBD_1642 transcriptional regulator, LysR family; LysR family transcriptional regulator 189527 10211128 Rahaq_0168 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004210925.1 188619 R 741091 CDS YP_004210926.1 322830899 10211129 189667..189975 1 NC_015061.1 KEGG: kpu:KP1_1209 transport protein; transporter 189975 10211129 Rahaq_0169 Rahnella sp. Y9602 transporter YP_004210926.1 189667 D 741091 CDS YP_004210927.1 322830900 10211130 190096..190947 1 NC_015061.1 KEGG: ebi:EbC_18640 excinuclease cho; PFAM: Excinuclease ABC C subunit domain protein; SMART: Excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain-containing protein 190947 10211130 Rahaq_0170 Rahnella sp. Y9602 Excinuclease ABC C subunit domain-containing protein YP_004210927.1 190096 D 741091 CDS YP_004210928.1 322830901 10211131 complement(191031..191264) 1 NC_015061.1 KEGG: epy:EpC_05510 conserved uncharacterized protein; hypothetical protein 191264 10211131 Rahaq_0171 Rahnella sp. Y9602 hypothetical protein YP_004210928.1 191031 R 741091 CDS YP_004210929.1 322830902 10211132 complement(191532..192884) 1 NC_015061.1 KEGG: spe:Spro_4714 glutathione reductase; TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; glutathione-disulfide reductase 192884 10211132 Rahaq_0172 Rahnella sp. Y9602 glutathione-disulfide reductase YP_004210929.1 191532 R 741091 CDS YP_004210930.1 322830903 10211133 complement(193061..193903) 1 NC_015061.1 PFAM: protein of unknown function DUF519; KEGG: spe:Spro_4713 hypothetical protein; hypothetical protein 193903 10211133 Rahaq_0173 Rahnella sp. Y9602 hypothetical protein YP_004210930.1 193061 R 741091 CDS YP_004210931.1 322830904 10211134 194085..196145 1 NC_015061.1 KEGG: spe:Spro_4701 oligopeptidase A; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; oligopeptidase A 196145 10211134 Rahaq_0174 Rahnella sp. Y9602 oligopeptidase A YP_004210931.1 194085 D 741091 CDS YP_004210932.1 322830905 10211135 196155..196901 1 NC_015061.1 PFAM: protein of unknown function DUF548; KEGG: spe:Spro_4700 methyltransferase; hypothetical protein 196901 10211135 Rahaq_0175 Rahnella sp. Y9602 hypothetical protein YP_004210932.1 196155 D 741091 CDS YP_004210933.1 322830906 10211136 complement(196995..197435) 1 NC_015061.1 PFAM: UspA domain-containing protein; KEGG: spe:Spro_4691 UspA domain-containing protein; UspA domain-containing protein 197435 10211136 Rahaq_0176 Rahnella sp. Y9602 UspA domain-containing protein YP_004210933.1 196995 R 741091 CDS YP_004210934.1 322830907 10211137 197773..198108 1 NC_015061.1 PFAM: Universal stress protein B; KEGG: spe:Spro_4690 universal stress protein UspB; Universal stress protein B 198108 10211137 Rahaq_0177 Rahnella sp. Y9602 Universal stress protein B YP_004210934.1 197773 D 741091 CDS YP_004210935.1 322830908 10211138 complement(198209..199714) 1 NC_015061.1 PFAM: phosphate transporter; KEGG: spe:Spro_4689 phosphate transporter; phosphate transporter 199714 10211138 Rahaq_0178 Rahnella sp. Y9602 phosphate transporter YP_004210935.1 198209 R 741091 CDS YP_004210936.1 322830909 10211139 200026..201228 1 NC_015061.1 PFAM: HI0933 family protein; KEGG: ypb:YPTS_4023 hypothetical protein; hypothetical protein 201228 10211139 Rahaq_0179 Rahnella sp. Y9602 hypothetical protein YP_004210936.1 200026 D 741091 CDS YP_004210937.1 322830910 10211140 complement(201369..201677) 1 NC_015061.1 KEGG: dda:Dd703_2588 hypothetical protein; hypothetical protein 201677 10211140 Rahaq_0180 Rahnella sp. Y9602 hypothetical protein YP_004210937.1 201369 R 741091 CDS YP_004210938.1 322830911 10211141 complement(201719..203374) 1 NC_015061.1 KEGG: pct:PC1_3039 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 203374 10211141 Rahaq_0181 Rahnella sp. Y9602 methyl-accepting chemotaxis sensory transducer YP_004210938.1 201719 R 741091 CDS YP_004210939.1 322830912 10211142 203531..203773 1 NC_015061.1 KEGG: dan:Dana_GF19434 GF19434 gene product from transcript GF19434-RA; hypothetical protein 203773 10211142 Rahaq_0182 Rahnella sp. Y9602 hypothetical protein YP_004210939.1 203531 D 741091 CDS YP_004210940.1 322830913 10211143 203770..205020 1 NC_015061.1 PFAM: beta-lactamase; KEGG: eca:ECA0077 hypothetical protein; beta-lactamase 205020 10211143 Rahaq_0183 Rahnella sp. Y9602 beta-lactamase YP_004210940.1 203770 D 741091 CDS YP_004210941.1 322830914 10211144 complement(205022..206728) 1 NC_015061.1 KEGG: ebi:EbC_38020 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 206728 10211144 Rahaq_0184 Rahnella sp. Y9602 phospholipid/glycerol acyltransferase YP_004210941.1 205022 R 741091 CDS YP_004210942.1 322830915 10211145 206927..208153 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_0088 major facilitator superfamily transporter; major facilitator superfamily protein 208153 10211145 Rahaq_0185 Rahnella sp. Y9602 major facilitator superfamily protein YP_004210942.1 206927 D 741091 CDS YP_004210943.1 322830916 10211146 complement(208150..208659) 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_4654 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 208659 10211146 Rahaq_0186 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004210943.1 208150 R 741091 CDS YP_004210944.1 322830917 10211147 complement(209085..210935) 1 NC_015061.1 KEGG: cpy:Cphy_0396 hypothetical protein; hypothetical protein 210935 10211147 Rahaq_0187 Rahnella sp. Y9602 hypothetical protein YP_004210944.1 209085 R 741091 CDS YP_004210945.1 322830918 10211148 complement(210978..213074) 1 NC_015061.1 KEGG: cpy:Cphy_0396 hypothetical protein; hypothetical protein 213074 10211148 Rahaq_0188 Rahnella sp. Y9602 hypothetical protein YP_004210945.1 210978 R 741091 CDS YP_004210946.1 322830919 10211149 213312..214007 1 NC_015061.1 PFAM: Pirin domain protein; KEGG: yen:YE4023 hypothetical protein; pirin 214007 10211149 Rahaq_0189 Rahnella sp. Y9602 pirin YP_004210946.1 213312 D 741091 CDS YP_004210947.1 322830920 10211150 complement(214072..216792) 1 NC_015061.1 KEGG: yen:YE4059 autotransporter protein; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; Pertactin; outer membrane autotransporter barrel domain-containing protein 216792 10211150 Rahaq_0190 Rahnella sp. Y9602 outer membrane autotransporter barrel domain-containing protein YP_004210947.1 214072 R 741091 CDS YP_004210948.1 322830921 10211151 217193..217516 1 NC_015061.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: asa:ASA_0480 PTS system cellobiose-specific IIB component; PTS system lactose/cellobiose-specific transporter subunit IIB 217516 10211151 Rahaq_0191 Rahnella sp. Y9602 PTS system lactose/cellobiose-specific transporter subunit IIB YP_004210948.1 217193 D 741091 CDS YP_004210949.1 322830922 10211152 217513..218841 1 NC_015061.1 TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; KEGG: pwa:Pecwa_0034 PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC; PTS system lactose/cellobiose family transporter subunit IIC 218841 10211152 Rahaq_0192 Rahnella sp. Y9602 PTS system lactose/cellobiose family transporter subunit IIC YP_004210949.1 217513 D 741091 CDS YP_004210950.1 322830923 10211153 218895..220277 1 NC_015061.1 KEGG: pct:PC1_0030 beta-glucosidase; PFAM: glycoside hydrolase family 1; 6-phospho-beta-glucosidase 220277 10211153 Rahaq_0193 Rahnella sp. Y9602 6-phospho-beta-glucosidase YP_004210950.1 218895 D 741091 CDS YP_004210951.1 322830924 10211154 220291..221208 1 NC_015061.1 KEGG: yen:YE1295 LacI family transcriptional regulatory protein; PFAM: regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator 221208 10211154 Rahaq_0194 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004210951.1 220291 D 741091 CDS YP_004210952.1 322830925 10211155 221308..222309 1 NC_015061.1 KEGG: spe:Spro_4652 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator 222309 10211155 Rahaq_0195 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004210952.1 221308 D 741091 CDS YP_004210953.1 322830926 10211156 complement(222455..222970) 1 NC_015061.1 TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; KEGG: pct:PC1_3943 carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; thermoresistant glucokinase family carbohydrate kinase 222970 10211156 Rahaq_0196 Rahnella sp. Y9602 thermoresistant glucokinase family carbohydrate kinase YP_004210953.1 222455 R 741091 CDS YP_004210954.1 322830927 10211157 223217..224533 1 NC_015061.1 KEGG: yen:YE4021 gluconate permease; TIGRFAM: gluconate transporter; PFAM: gluconate transporter; gluconate transporter 224533 10211157 Rahaq_0197 Rahnella sp. Y9602 gluconate transporter YP_004210954.1 223217 D 741091 CDS YP_004210955.1 322830928 10211158 224656..224988 1 NC_015061.1 KEGG: plu:plu3981 hypothetical protein; hypothetical protein 224988 10211158 Rahaq_0198 Rahnella sp. Y9602 hypothetical protein YP_004210955.1 224656 D 741091 CDS YP_004210956.1 322830929 10211159 225004..225294 1 NC_015061.1 KEGG: cko:CKO_04948 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 225294 10211159 Rahaq_0199 Rahnella sp. Y9602 XRE family transcriptional regulator YP_004210956.1 225004 D 741091 CDS YP_004210957.1 322830930 10211160 complement(225349..225942) 1 NC_015061.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: eca:ECA4157 dITP- and XTP- hydrolase; multiple antibiotic resistance (MarC)-like protein 225942 10211160 Rahaq_0200 Rahnella sp. Y9602 multiple antibiotic resistance (MarC)-like protein YP_004210957.1 225349 R 741091 CDS YP_004210958.1 322830931 10211161 226153..227256 1 NC_015061.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; KEGG: yen:YE4018 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding; aspartate-semialdehyde dehydrogenase 227256 10211161 Rahaq_0201 Rahnella sp. Y9602 aspartate-semialdehyde dehydrogenase YP_004210958.1 226153 D 741091 CDS YP_004210959.1 322830932 10211162 227669..229852 1 NC_015061.1 TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; KEGG: spe:Spro_4647 glycogen branching enzyme; SMART: alpha amylase catalytic sub domain; 1,4-alpha-glucan-branching protein 229852 10211162 Rahaq_0202 Rahnella sp. Y9602 1,4-alpha-glucan-branching protein YP_004210959.1 227669 D 741091 CDS YP_004210960.1 322830933 10211163 229852..231876 1 NC_015061.1 TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; KEGG: spe:Spro_4646 glycogen debranching enzyme; SMART: alpha amylase catalytic sub domain; glycogen debranching protein GlgX 231876 10211163 Rahaq_0203 Rahnella sp. Y9602 glycogen debranching protein GlgX YP_004210960.1 229852 D 741091 CDS YP_004210961.1 322830934 10211164 231894..233171 1 NC_015061.1 KEGG: spe:Spro_4645 glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate adenylyltransferase 233171 10211164 Rahaq_0204 Rahnella sp. Y9602 glucose-1-phosphate adenylyltransferase YP_004210961.1 231894 D 741091 CDS YP_004210962.1 322830935 10211165 233243..234679 1 NC_015061.1 TIGRFAM: glycogen/starch synthase, ADP-glucose type; KEGG: spe:Spro_4644 glycogen synthase; PFAM: Starch synthase catalytic domain-containing protein; glycosyl transferase group 1; glycogen/starch synthase 234679 10211165 Rahaq_0205 Rahnella sp. Y9602 glycogen/starch synthase YP_004210962.1 233243 D 741091 CDS YP_004210963.1 322830936 10211166 234717..237164 1 NC_015061.1 TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; KEGG: ypg:YpAngola_A4122 glycogen phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase 237164 10211166 Rahaq_0206 Rahnella sp. Y9602 glycogen/starch/alpha-glucan phosphorylase YP_004210963.1 234717 D 741091 CDS YP_004210964.1 322830937 10211167 complement(237309..238820) 1 NC_015061.1 KEGG: spe:Spro_4642 glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase; glycerol-3-phosphate dehydrogenase 238820 10211167 Rahaq_0207 Rahnella sp. Y9602 glycerol-3-phosphate dehydrogenase YP_004210964.1 237309 R 741091 CDS YP_004210965.1 322830938 10211168 complement(239098..239856) 1 NC_015061.1 KEGG: yen:YE3987 DNA-binding transcriptional repressor GlpR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator 239856 10211168 Rahaq_0208 Rahnella sp. Y9602 DeoR family transcriptional regulator YP_004210965.1 239098 R 741091 CDS YP_004210966.1 322830939 10211169 complement(239866..240699) 1 NC_015061.1 KEGG: yen:YE3988 intramembrane serine protease GlpG; PFAM: Rhomboid family protein; rhomboid protease 240699 10211169 Rahaq_0209 Rahnella sp. Y9602 rhomboid protease YP_004210966.1 239866 R 741091 CDS YP_004210967.1 322830940 10211170 complement(240808..242076) 1 NC_015061.1 PFAM: HipA domain protein; KEGG: bam:Bamb_5437 HipA domain-containing protein; HipA domain-containing protein 242076 10211170 Rahaq_0210 Rahnella sp. Y9602 HipA domain-containing protein YP_004210967.1 240808 R 741091 CDS YP_004210968.1 322830941 10211171 complement(242073..242561) 1 NC_015061.1 manually curated; PFAM: helix-turn-helix domain protein; KEGG: ecc:c5295 hypothetical protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 242561 10211171 Rahaq_0211 Rahnella sp. Y9602 helix-turn-helix domain-containing protein YP_004210968.1 242073 R 741091 CDS YP_004210969.1 322830942 10211172 complement(242681..243871) 1 NC_015061.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: tra:Trad_2517 Cys/Met metabolism pyridoxal-phosphate-dependent protein; Cys/Met metabolism pyridoxal-phosphate-dependent protein 243871 10211172 Rahaq_0212 Rahnella sp. Y9602 Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_004210969.1 242681 R 741091 CDS YP_004210970.1 322830943 10211173 complement(244012..244332) 1 NC_015061.1 PFAM: Rhodanese domain protein; KEGG: ebi:EbC_42170 thiosulfate sulfurtransferase; SMART: Rhodanese domain protein; thiosulfate sulfurtransferase 244332 10211173 Rahaq_0213 Rahnella sp. Y9602 thiosulfate sulfurtransferase YP_004210970.1 244012 R 741091 CDS YP_004210971.1 322830944 10211174 complement(244417..245172) 1 NC_015061.1 KEGG: enc:ECL_00585 transcriptional repressor UlaR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator 245172 10211174 Rahaq_0214 Rahnella sp. Y9602 DeoR family transcriptional regulator YP_004210971.1 244417 R 741091 CDS YP_004210972.1 322830945 10211175 complement(245287..246351) 1 NC_015061.1 KEGG: kva:Kvar_4669 enzyme with metallo-hydrolase domain protein; enzyme with metallo-hydrolase domain protein 246351 10211175 Rahaq_0215 Rahnella sp. Y9602 enzyme with metallo-hydrolase domain protein YP_004210972.1 245287 R 741091 CDS YP_004210973.1 322830946 10211176 246764..248167 1 NC_015061.1 KEGG: set:SEN4149 PTS system ascorbate-specific transporter subunit IIC; PTS system ascorbate-specific transporter subunit IIC 248167 10211176 Rahaq_0216 Rahnella sp. Y9602 PTS system ascorbate-specific transporter subunit IIC YP_004210973.1 246764 D 741091 CDS YP_004210974.1 322830947 10211177 248224..248532 1 NC_015061.1 KEGG: sbc:SbBS512_E4724 PTS system L-ascorbate-specific transporter subunit IIB; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; Protein-N(pi)-phosphohistidine--sugar phosphotransferase 248532 10211177 Rahaq_0217 Rahnella sp. Y9602 Protein-N(pi)-phosphohistidine--sugar phosphotransferase YP_004210974.1 248224 D 741091 CDS YP_004210975.1 322830948 10211178 248543..249013 1 NC_015061.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: set:SEN4151 PTS system L-ascorbate-specific transporter subunit IIA; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 249013 10211178 Rahaq_0218 Rahnella sp. Y9602 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_004210975.1 248543 D 741091 CDS YP_004210976.1 322830949 10211179 249039..249695 1 NC_015061.1 PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: ecz:ECS88_4782 3-keto-L-gulonate-6-phosphate decarboxylase; Orotidine 5'-phosphate decarboxylase 249695 10211179 Rahaq_0219 Rahnella sp. Y9602 Orotidine 5'-phosphate decarboxylase YP_004210976.1 249039 D 741091 CDS YP_004210977.1 322830950 10211180 249706..250566 1 NC_015061.1 TIGRFAM: hexulose-6-phosphate isomerase; KEGG: seh:SeHA_C4805 L-xylulose 5-phosphate 3-epimerase; PFAM: Xylose isomerase domain-containing protein TIM barrel; hexulose-6-phosphate isomerase 250566 10211180 Rahaq_0220 Rahnella sp. Y9602 hexulose-6-phosphate isomerase YP_004210977.1 249706 D 741091 CDS YP_004210978.1 322830951 10211181 250563..251252 1 NC_015061.1 PFAM: class II aldolase/adducin family protein; KEGG: sea:SeAg_B4666 L-ribulose-5-phosphate 4-epimerase; class II aldolase/adducin family protein 251252 10211181 Rahaq_0221 Rahnella sp. Y9602 class II aldolase/adducin family protein YP_004210978.1 250563 D 741091 CDS YP_004210979.1 322830952 10211182 complement(251209..251403) 1 NC_015061.1 KEGG: cfl:Cfla_3242 major facilitator superfamily MFS_1; hypothetical protein 251403 10211182 Rahaq_0222 Rahnella sp. Y9602 hypothetical protein YP_004210979.1 251209 R 741091 CDS YP_004210980.1 322830953 10211183 251520..253934 1 NC_015061.1 KEGG: spe:Spro_4636 glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase 253934 10211183 Rahaq_0223 Rahnella sp. Y9602 glycogen/starch/alpha-glucan phosphorylase YP_004210980.1 251520 D 741091 CDS YP_004210981.1 322830954 10211184 253943..256018 1 NC_015061.1 TIGRFAM: 4-alpha-glucanotransferase; KEGG: yen:YE3992 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77; 4-alpha-glucanotransferase 256018 10211184 Rahaq_0224 Rahnella sp. Y9602 4-alpha-glucanotransferase YP_004210981.1 253943 D 741091 CDS YP_004210982.1 322830955 10211185 complement(256074..256649) 1 NC_015061.1 KEGG: eay:EAM_3259 Fe-S protein; TIGRFAM: IscR-regulated protein YhgI; PFAM: HesB/YadR/YfhF-family protein; nitrogen-fixing NifU domain protein; IscR-regulated protein YhgI 256649 10211185 Rahaq_0225 Rahnella sp. Y9602 IscR-regulated protein YhgI YP_004210982.1 256074 R 741091 CDS YP_004210983.1 322830956 10211186 complement(256747..257436) 1 NC_015061.1 PFAM: phosphoribosyltransferase; KEGG: spe:Spro_4633 gluconate periplasmic binding protein; phosphoribosyltransferase 257436 10211186 Rahaq_0226 Rahnella sp. Y9602 phosphoribosyltransferase YP_004210983.1 256747 R 741091 CDS YP_004210984.1 322830957 10211187 257483..258265 1 NC_015061.1 KEGG: spe:Spro_4632 BioH protein; TIGRFAM: bioH protein; PFAM: alpha/beta hydrolase fold; bioH protein 258265 10211187 Rahaq_0227 Rahnella sp. Y9602 bioH protein YP_004210984.1 257483 D 741091 CDS YP_004210985.1 322830958 10211188 258486..258755 1 NC_015061.1 PFAM: protein of unknown function DUF1471; KEGG: yen:YE3996 hypothetical protein; hypothetical protein 258755 10211188 Rahaq_0228 Rahnella sp. Y9602 hypothetical protein YP_004210985.1 258486 D 741091 CDS YP_004210986.1 322830959 10211189 259063..260724 1 NC_015061.1 TIGRFAM: malonate decarboxylase, subunit alpha; KEGG: enc:ECL_04727 malonate decarboxylase, subunit alpha; malonate decarboxylase subunit alpha 260724 10211189 Rahaq_0229 Rahnella sp. Y9602 malonate decarboxylase subunit alpha YP_004210986.1 259063 D 741091 CDS YP_004210987.1 322830960 10211190 260730..261587 1 NC_015061.1 TIGRFAM: triphosphoribosyl-dephospho-CoA synthase MdcB; KEGG: kpn:KPN_01562 triphosphoribosyl-dephospho-CoA transferase; PFAM: triphosphoribosyl-dephospho-CoA protein; triphosphoribosyl-dephospho-CoA synthase MdcB 261587 10211190 Rahaq_0230 Rahnella sp. Y9602 triphosphoribosyl-dephospho-CoA synthase MdcB YP_004210987.1 260730 D 741091 CDS YP_004210988.1 322830961 10211191 261628..261930 1 NC_015061.1 KEGG: kpu:KP1_2579 malonate decarboxylase subunit delta; TIGRFAM: malonate decarboxylase acyl carrier protein; PFAM: malonate decarboxylase subunit delta; malonate decarboxylase acyl carrier protein 261930 10211191 Rahaq_0231 Rahnella sp. Y9602 malonate decarboxylase acyl carrier protein YP_004210988.1 261628 D 741091 CDS YP_004210989.1 322830962 10211192 261920..262762 1 NC_015061.1 TIGRFAM: malonate decarboxylase, subunit beta; KEGG: cro:ROD_44601 malonate decarboxylase subunit beta MdcD; malonate decarboxylase subunit beta 262762 10211192 Rahaq_0232 Rahnella sp. Y9602 malonate decarboxylase subunit beta YP_004210989.1 261920 D 741091 CDS YP_004210990.1 322830963 10211193 262759..263574 1 NC_015061.1 KEGG: dda:Dd703_1243 malonate decarboxylase, subunit gamma; TIGRFAM: malonate decarboxylase, subunit gamma; PFAM: malonate decarboxylase subunit gamma; malonate decarboxylase subunit gamma 263574 10211193 Rahaq_0233 Rahnella sp. Y9602 malonate decarboxylase subunit gamma YP_004210990.1 262759 D 741091 CDS YP_004210991.1 322830964 10211194 263765..264727 1 NC_015061.1 KEGG: cko:CKO_04764 hypothetical protein; TIGRFAM: auxin efflux carrier; PFAM: Auxin Efflux Carrier; auxin efflux carrier 264727 10211194 Rahaq_0234 Rahnella sp. Y9602 auxin efflux carrier YP_004210991.1 263765 D 741091 CDS YP_004210992.1 322830965 10211195 264745..265371 1 NC_015061.1 TIGRFAM: holo-ACP synthase, malonate decarboxylase-specific; KEGG: ctu:Ctu_35010 phosphoribosyl-dephospho-CoA transferase; PFAM: Holo-ACP synthase, malonate decarboxylase-specific; malonate decarboxylase-specific holo-ACP synthase 265371 10211195 Rahaq_0235 Rahnella sp. Y9602 malonate decarboxylase-specific holo-ACP synthase YP_004210992.1 264745 D 741091 CDS YP_004210993.1 322830966 10211196 265399..266334 1 NC_015061.1 KEGG: dda:Dd703_1240 malonate decarboxylase, subunit epsilon; TIGRFAM: malonate decarboxylase, subunit epsilon; PFAM: Acyl transferase; malonate decarboxylase subunit epsilon 266334 10211196 Rahaq_0236 Rahnella sp. Y9602 malonate decarboxylase subunit epsilon YP_004210993.1 265399 D 741091 CDS YP_004210994.1 322830967 10211197 266435..266674 1 NC_015061.1 KEGG: cro:ROD_27521 hypothetical protein; hypothetical protein 266674 10211197 Rahaq_0237 Rahnella sp. Y9602 hypothetical protein YP_004210994.1 266435 D 741091 CDS YP_004210995.1 322830968 10211198 266658..266924 1 NC_015061.1 KEGG: nwi:Nwi_1574 hypothetical protein; hypothetical protein 266924 10211198 Rahaq_0238 Rahnella sp. Y9602 hypothetical protein YP_004210995.1 266658 D 741091 CDS YP_004210996.1 322830969 10211199 complement(266904..267824) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: enc:ECL_04719 LysR family transcriptional regulator; LysR family transcriptional regulator 267824 10211199 Rahaq_0239 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004210996.1 266904 R 741091 CDS YP_004210997.1 322830970 10211200 complement(267893..268132) 1 NC_015061.1 PFAM: protein of unknown function DUF1920; KEGG: yen:YE3997 hypothetical protein; hypothetical protein 268132 10211200 Rahaq_0240 Rahnella sp. Y9602 hypothetical protein YP_004210997.1 267893 R 741091 CDS YP_004210998.1 322830971 10211201 complement(268141..270459) 1 NC_015061.1 KEGG: yen:YE3998 ferrous iron transport protein B; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B domain-containing protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain-containing protein; ferrous iron transport protein B 270459 10211201 Rahaq_0241 Rahnella sp. Y9602 ferrous iron transport protein B YP_004210998.1 268141 R 741091 CDS YP_004210999.1 322830972 10211202 complement(270546..270770) 1 NC_015061.1 PFAM: FeoA family protein; KEGG: yen:YE3999 ferrous iron transport protein A; FeoA family protein 270770 10211202 Rahaq_0242 Rahnella sp. Y9602 FeoA family protein YP_004210999.1 270546 R 741091 CDS YP_004211000.1 322830973 10211203 complement(271169..273499) 1 NC_015061.1 KEGG: eok:G2583_4104 protein YhgF; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; Tex-like protein 273499 10211203 Rahaq_0243 Rahnella sp. Y9602 Tex-like protein YP_004211000.1 271169 R 741091 CDS YP_004211001.1 322830974 10211204 complement(273611..274084) 1 NC_015061.1 KEGG: kpu:KP1_5107 transcription elongation factor GreB; TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain-containing protein; transcription elongation factor GreB 274084 10211204 Rahaq_0244 Rahnella sp. Y9602 transcription elongation factor GreB YP_004211001.1 273611 R 741091 CDS YP_004211002.1 322830975 10211205 274316..280333 1 NC_015061.1 PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: ypz:YPZ3_2273 membrane protein; alpha-2-macroglobulin 280333 10211205 Rahaq_0245 Rahnella sp. Y9602 alpha-2-macroglobulin YP_004211002.1 274316 D 741091 CDS YP_004211003.1 322830976 10211206 280390..282759 1 NC_015061.1 KEGG: ypy:YPK_3054 penicillin-binding protein 1C; TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; penicillin-binding protein 1C 282759 10211206 Rahaq_0246 Rahnella sp. Y9602 penicillin-binding protein 1C YP_004211003.1 280390 D 741091 CDS YP_004211004.1 322830977 10211207 complement(282774..283889) 1 NC_015061.1 KEGG: eok:G2583_3869 fimbrial protein; fimbrial protein 283889 10211207 Rahaq_0247 Rahnella sp. Y9602 fimbrial protein YP_004211004.1 282774 R 741091 CDS YP_004211005.1 322830978 10211208 complement(283899..286442) 1 NC_015061.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: ecy:ECSE_3430 fimbrial usher protein; fimbrial biogenesis outer membrane usher protein 286442 10211208 Rahaq_0248 Rahnella sp. Y9602 fimbrial biogenesis outer membrane usher protein YP_004211005.1 283899 R 741091 CDS YP_004211006.1 322830979 10211209 complement(286515..287201) 1 NC_015061.1 PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: esa:ESA_02344 hypothetical protein; Pili assembly chaperone, N-terminal protein 287201 10211209 Rahaq_0249 Rahnella sp. Y9602 Pili assembly chaperone, N-terminal protein YP_004211006.1 286515 R 741091 CDS YP_004211007.1 322830980 10211210 complement(287306..287854) 1 NC_015061.1 PFAM: Fimbrial protein domain-containing protein; KEGG: ebw:BWG_2846 fimbrial-like adhesin protein; fimbrial protein domain-containing protein 287854 10211210 Rahaq_0250 Rahnella sp. Y9602 fimbrial protein domain-containing protein YP_004211007.1 287306 R 741091 CDS YP_004211008.1 322830981 10211211 complement(288153..288422) 1 NC_015061.1 hypothetical protein 288422 10211211 Rahaq_0251 Rahnella sp. Y9602 hypothetical protein YP_004211008.1 288153 R 741091 CDS YP_004211009.1 322830982 10211212 288444..289163 1 NC_015061.1 KEGG: spe:Spro_4621 osmolarity response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator 289163 10211212 Rahaq_0252 Rahnella sp. Y9602 transcriptional regulator YP_004211009.1 288444 D 741091 CDS YP_004211010.1 322830983 10211213 289160..290521 1 NC_015061.1 KEGG: yen:YE4005 osmolarity sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase 290521 10211213 Rahaq_0253 Rahnella sp. Y9602 integral membrane sensor signal transduction histidine kinase YP_004211010.1 289160 D 741091 CDS YP_004211011.1 322830984 10211214 complement(290733..291212) 1 NC_015061.1 KEGG: spe:Spro_4619 PilT domain-containing protein; twitching motility protein PilT 291212 10211214 Rahaq_0254 Rahnella sp. Y9602 twitching motility protein PilT YP_004211011.1 290733 R 741091 CDS YP_004211012.1 322830985 10211215 complement(291209..291421) 1 NC_015061.1 KEGG: spe:Spro_4618 hypothetical protein; hypothetical protein 291421 10211215 Rahaq_0255 Rahnella sp. Y9602 hypothetical protein YP_004211012.1 291209 R 741091 CDS YP_004211013.1 322830986 10211216 complement(291525..293147) 1 NC_015061.1 TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); KEGG: esa:ESA_04336 phosphoenolpyruvate carboxykinase; PFAM: phosphoenolpyruvate carboxykinase (ATP); phosphoenolpyruvate carboxykinase 293147 10211216 Rahaq_0256 Rahnella sp. Y9602 phosphoenolpyruvate carboxykinase YP_004211013.1 291525 R 741091 CDS YP_004211014.1 322830987 10211217 complement(293375..294286) 1 NC_015061.1 PFAM: Hsp33 protein; KEGG: ypb:YPTS_3957 HSP33-like chaperonin; Hsp33 protein 294286 10211217 Rahaq_0257 Rahnella sp. Y9602 Hsp33 protein YP_004211014.1 293375 R 741091 CDS YP_004211015.1 322830988 10211218 complement(294318..294722) 1 NC_015061.1 KEGG: spe:Spro_4615 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein 294722 10211218 Rahaq_0258 Rahnella sp. Y9602 RNA-binding S4 domain-containing protein YP_004211015.1 294318 R 741091 CDS YP_004211016.1 322830989 10211219 complement(294747..295436) 1 NC_015061.1 KEGG: spe:Spro_4614 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 295436 10211219 Rahaq_0259 Rahnella sp. Y9602 HAD-superfamily hydrolase YP_004211016.1 294747 R 741091 CDS YP_004211017.1 322830990 10211220 complement(295551..297683) 1 NC_015061.1 PFAM: Intracellular growth attenuator IgaA; KEGG: spe:Spro_4613 intracellular growth attenuator IgaA; intracellular growth attenuator igaA 297683 10211220 Rahaq_0260 Rahnella sp. Y9602 intracellular growth attenuator igaA YP_004211017.1 295551 R 741091 CDS YP_004211018.1 322830991 10211221 complement(297971..298099) 1 NC_015061.1 hypothetical protein 298099 10211221 Rahaq_0261 Rahnella sp. Y9602 hypothetical protein YP_004211018.1 297971 R 741091 CDS YP_004211019.1 322830992 10211222 298141..298698 1 NC_015061.1 PFAM: NUDIX hydrolase; KEGG: spe:Spro_4612 ADP-ribose diphosphatase NudE; NUDIX hydrolase 298698 10211222 Rahaq_0262 Rahnella sp. Y9602 NUDIX hydrolase YP_004211019.1 298141 D 741091 CDS YP_004211020.1 322830993 10211223 complement(298773..301328) 1 NC_015061.1 TIGRFAM: penicillin-binding protein, 1A family; KEGG: yen:YE3979 peptidoglycan synthetase; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein 301328 10211223 Rahaq_0263 Rahnella sp. Y9602 penicillin-binding protein YP_004211020.1 298773 R 741091 CDS YP_004211021.1 322830994 10211224 301450..302289 1 NC_015061.1 KEGG: ddc:Dd586_3806 hypothetical protein; hypothetical protein 302289 10211224 Rahaq_0264 Rahnella sp. Y9602 hypothetical protein YP_004211021.1 301450 D 741091 CDS YP_004211022.1 322830995 10211225 302289..302852 1 NC_015061.1 PFAM: Fimbrial assembly family protein; KEGG: spe:Spro_4609 fimbrial assembly family protein; fimbrial assembly family protein 302852 10211225 Rahaq_0265 Rahnella sp. Y9602 fimbrial assembly family protein YP_004211022.1 302289 D 741091 CDS YP_004211023.1 322830996 10211226 302849..303709 1 NC_015061.1 KEGG: pam:PANA_3670 hypothetical protein; hypothetical protein 303709 10211226 Rahaq_0266 Rahnella sp. Y9602 hypothetical protein YP_004211023.1 302849 D 741091 CDS YP_004211024.1 322830997 10211227 303709..304971 1 NC_015061.1 KEGG: pwa:Pecwa_4062 outer membrane porin HofQ; TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; type IV pilus secretin PilQ 304971 10211227 Rahaq_0267 Rahnella sp. Y9602 type IV pilus secretin PilQ YP_004211024.1 303709 D 741091 CDS YP_004211025.1 322830998 10211228 305266..305841 1 NC_015061.1 KEGG: sgl:SG2309 shikimate kinase I; PFAM: shikimate kinase; shikimate kinase 305841 10211228 Rahaq_0268 Rahnella sp. Y9602 shikimate kinase YP_004211025.1 305266 D 741091 CDS YP_004211026.1 322830999 10211229 305899..306981 1 NC_015061.1 TIGRFAM: 3-dehydroquinate synthase; KEGG: spe:Spro_4604 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase 306981 10211229 Rahaq_0269 Rahnella sp. Y9602 3-dehydroquinate synthase YP_004211026.1 305899 D 741091 CDS YP_004211027.1 322831000 10211230 307109..308158 1 NC_015061.1 PFAM: Sporulation domain-containing protein; KEGG: spe:Spro_4603 hypothetical protein; sporulation domain-containing protein 308158 10211230 Rahaq_0270 Rahnella sp. Y9602 sporulation domain-containing protein YP_004211027.1 307109 D 741091 CDS YP_004211028.1 322831001 10211231 308241..309056 1 NC_015061.1 KEGG: ypb:YPTS_3942 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; DNA adenine methylase 309056 10211231 Rahaq_0271 Rahnella sp. Y9602 DNA adenine methylase YP_004211028.1 308241 D 741091 CDS YP_004211029.1 322831002 10211232 309107..309784 1 NC_015061.1 TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: kva:Kvar_0344 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 309784 10211232 Rahaq_0272 Rahnella sp. Y9602 ribulose-phosphate 3-epimerase YP_004211029.1 309107 D 741091 CDS YP_004211030.1 322831003 10211233 309777..310475 1 NC_015061.1 KEGG: yen:YE3970 phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoglycolate phosphatase 310475 10211233 Rahaq_0273 Rahnella sp. Y9602 phosphoglycolate phosphatase YP_004211030.1 309777 D 741091 CDS YP_004211031.1 322831004 10211234 310477..311493 1 NC_015061.1 TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: pwa:Pecwa_4054 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; tryptophanyl-tRNA synthetase 311493 10211234 Rahaq_0274 Rahnella sp. Y9602 tryptophanyl-tRNA synthetase YP_004211031.1 310477 D 741091 CDS YP_004211032.1 322831005 10211235 complement(311573..312967) 1 NC_015061.1 KEGG: ypb:YPTS_3938 siroheme synthase; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Sirohaem synthase, dimerisation domain; uroporphyrin-III C-methyltransferase 312967 10211235 Rahaq_0275 Rahnella sp. Y9602 uroporphyrin-III C-methyltransferase YP_004211032.1 311573 R 741091 CDS YP_004211033.1 322831006 10211236 complement(313059..313409) 1 NC_015061.1 KEGG: ypb:YPTS_3936 nitrite reductase small subunit; TIGRFAM: nitrite reductase [NAD(P)H], small subunit; nitrite reductase (NAD(P)H) small subunit 313409 10211236 Rahaq_0276 Rahnella sp. Y9602 nitrite reductase (NAD(P)H) small subunit YP_004211033.1 313059 R 741091 CDS YP_004211034.1 322831007 10211237 complement(313406..315958) 1 NC_015061.1 KEGG: spe:Spro_4595 nitrite reductase (NAD(P)H), large subunit; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; nitrite reductase (NAD(P)H) large subunit 315958 10211237 Rahaq_0277 Rahnella sp. Y9602 nitrite reductase (NAD(P)H) large subunit YP_004211034.1 313406 R 741091 CDS YP_004211035.1 322831008 10211238 316182..317465 1 NC_015061.1 KEGG: spe:Spro_4594 cytosine deaminase; PFAM: Amidohydrolase 3; cytosine deaminase 317465 10211238 Rahaq_0278 Rahnella sp. Y9602 cytosine deaminase YP_004211035.1 316182 D 741091 CDS YP_004211036.1 322831009 10211239 317611..318177 1 NC_015061.1 KEGG: spe:Spro_4589 peptidyl-prolyl cis-trans isomerase A (rotamase A); PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; Peptidylprolyl isomerase 318177 10211239 Rahaq_0279 Rahnella sp. Y9602 Peptidylprolyl isomerase YP_004211036.1 317611 D 741091 CDS YP_004211037.1 322831010 10211240 318319..319842 1 NC_015061.1 PFAM: protein of unknown function DUF853 NPT hydrolase; KEGG: spe:Spro_4584 hypothetical protein; hypothetical protein 319842 10211240 Rahaq_0280 Rahnella sp. Y9602 hypothetical protein YP_004211037.1 318319 D 741091 CDS YP_004211038.1 322831011 10211241 320086..321291 1 NC_015061.1 KEGG: eca:ECA4385 hypothetical protein; hypothetical protein 321291 10211241 Rahaq_0281 Rahnella sp. Y9602 hypothetical protein YP_004211038.1 320086 D 741091 CDS YP_004211039.1 322831012 10211242 321389..321559 1 NC_015061.1 KEGG: esa:ESA_04371 hypothetical protein; hypothetical protein 321559 10211242 Rahaq_0282 Rahnella sp. Y9602 hypothetical protein YP_004211039.1 321389 D 741091 CDS YP_004211040.1 322831013 10211243 321549..322151 1 NC_015061.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: ent:Ent638_3788 cell filamentation protein Fic; filamentation induced by cAMP protein fic 322151 10211243 Rahaq_0283 Rahnella sp. Y9602 filamentation induced by cAMP protein fic YP_004211040.1 321549 D 741091 CDS YP_004211041.1 322831014 10211244 322228..322803 1 NC_015061.1 KEGG: yen:YE3958 para-aminobenzoate synthase component II; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; glutamine amidotransferase of anthranilate synthase 322803 10211244 Rahaq_0284 Rahnella sp. Y9602 glutamine amidotransferase of anthranilate synthase YP_004211041.1 322228 D 741091 CDS YP_004211042.1 322831015 10211245 322927..324144 1 NC_015061.1 KEGG: ypy:YPK_0245 bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; TIGRFAM: succinylornithine transaminase family; acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; succinylornithine transaminase family 324144 10211245 Rahaq_0285 Rahnella sp. Y9602 succinylornithine transaminase family YP_004211042.1 322927 D 741091 CDS YP_004211043.1 322831016 10211246 complement(324838..326913) 1 NC_015061.1 TIGRFAM: integral membrane protein, YccS/YhfK family; KEGG: spe:Spro_4581 YccS/YhfK family integral membrane protein; YccS/YhfK family integral membrane protein 326913 10211246 Rahaq_0286 Rahnella sp. Y9602 YccS/YhfK family integral membrane protein YP_004211043.1 324838 R 741091 CDS YP_004211044.1 322831017 10211247 complement(326975..327607) 1 NC_015061.1 KEGG: ebi:EbC_41710 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; Crp/Fnr family transcriptional regulator 327607 10211247 Rahaq_0287 Rahnella sp. Y9602 Crp/Fnr family transcriptional regulator YP_004211044.1 326975 R 741091 CDS YP_004211045.1 322831018 10211248 327970..328377 1 NC_015061.1 PFAM: OsmC family protein; KEGG: spe:Spro_4579 hypothetical protein; OsmC family protein 328377 10211248 Rahaq_0288 Rahnella sp. Y9602 OsmC family protein YP_004211045.1 327970 D 741091 CDS YP_004211046.1 322831019 10211249 complement(328381..329250) 1 NC_015061.1 KEGG: spe:Spro_4578 phosphoribulokinase; Phosphoribulokinase 329250 10211249 Rahaq_0289 Rahnella sp. Y9602 Phosphoribulokinase YP_004211046.1 328381 R 741091 CDS YP_004211047.1 322831020 10211250 complement(329386..330300) 1 NC_015061.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cko:CKO_04286 DNA-binding transcriptional activator AllS; LysR family transcriptional regulator 330300 10211250 Rahaq_0290 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004211047.1 329386 R 741091 CDS YP_004211048.1 322831021 10211251 330515..331021 1 NC_015061.1 KEGG: kpu:KP1_1359 ureidoglycolate hydrolase; PFAM: Ureidoglycolate hydrolase; ureidoglycolate hydrolase 331021 10211251 Rahaq_0291 Rahnella sp. Y9602 ureidoglycolate hydrolase YP_004211048.1 330515 D 741091 CDS YP_004211049.1 322831022 10211252 331108..331917 1 NC_015061.1 KEGG: ecy:ECSE_0532 DNA-binding transcriptional repressor AllR; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; IclR family transcriptional regulator 331917 10211252 Rahaq_0292 Rahnella sp. Y9602 IclR family transcriptional regulator YP_004211049.1 331108 D 741091 CDS YP_004211050.1 322831023 10211253 332032..333813 1 NC_015061.1 KEGG: eck:EC55989_0522 glyoxylate carboligase; TIGRFAM: glyoxylate carboligase; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; glyoxylate carboligase 333813 10211253 Rahaq_0293 Rahnella sp. Y9602 glyoxylate carboligase YP_004211050.1 332032 D 741091 CDS YP_004211051.1 322831024 10211254 333829..334605 1 NC_015061.1 TIGRFAM: hydroxypyruvate isomerase; KEGG: ecl:EcolC_3114 hydroxypyruvate isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel; hydroxypyruvate isomerase 334605 10211254 Rahaq_0294 Rahnella sp. Y9602 hydroxypyruvate isomerase YP_004211051.1 333829 D 741091 CDS YP_004211052.1 322831025 10211255 334697..335575 1 NC_015061.1 TIGRFAM: 2-hydroxy-3-oxopropionate reductase; KEGG: ecc:c0624 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 2-hydroxy-3-oxopropionate reductase 335575 10211255 Rahaq_0295 Rahnella sp. Y9602 2-hydroxy-3-oxopropionate reductase YP_004211052.1 334697 D 741091 CDS YP_004211053.1 322831026 10211256 335651..337105 1 NC_015061.1 KEGG: sed:SeD_A0570 allantoin permease; TIGRFAM: NCS1 nucleoside transporter family; PFAM: permease for cytosine/purines uracil thiamine allantoin; NCS1 nucleoside transporter family 337105 10211256 Rahaq_0296 Rahnella sp. Y9602 NCS1 nucleoside transporter family YP_004211053.1 335651 D 741091 CDS YP_004211054.1 322831027 10211257 337188..338549 1 NC_015061.1 KEGG: kpu:KP1_1367 allantoinase; TIGRFAM: allantoinase; PFAM: amidohydrolase; allantoinase 338549 10211257 Rahaq_0297 Rahnella sp. Y9602 allantoinase YP_004211054.1 337188 D 741091 CDS YP_004211055.1 322831028 10211258 338612..339898 1 NC_015061.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: kpu:KP1_1368 purine permease YbbY; xanthine/uracil/vitamin C permease 339898 10211258 Rahaq_0298 Rahnella sp. Y9602 xanthine/uracil/vitamin C permease YP_004211055.1 338612 D 741091 CDS YP_004211056.1 322831029 10211259 339923..341068 1 NC_015061.1 TIGRFAM: glycerate kinase; KEGG: sea:SeAg_B0571 glycerate kinase II; PFAM: glycerate kinase; glycerate kinase 341068 10211259 Rahaq_0299 Rahnella sp. Y9602 glycerate kinase YP_004211056.1 339923 D 741091 CDS YP_004211057.1 322831030 10211260 complement(341136..341927) 1 NC_015061.1 KEGG: ecw:EcE24377A_0553 hypothetical protein; TIGRFAM: allantoin catabolism protein; PFAM: Cupin 2 conserved barrel domain protein; protein of unknown function DUF861 cupin_3; allantoin catabolism protein 341927 10211260 Rahaq_0300 Rahnella sp. Y9602 allantoin catabolism protein YP_004211057.1 341136 R 741091 CDS YP_004211058.1 322831031 10211261 complement(341950..343176) 1 NC_015061.1 TIGRFAM: allantoate amidohydrolase; amidase, hydantoinase/carbamoylase family; KEGG: kpu:KP1_1372 allantoate amidohydrolase; PFAM: peptidase M20; allantoate amidohydrolase 343176 10211261 Rahaq_0301 Rahnella sp. Y9602 allantoate amidohydrolase YP_004211058.1 341950 R 741091 CDS YP_004211059.1 322831032 10211262 complement(343202..344251) 1 NC_015061.1 KEGG: kpu:KP1_1373 malate dehydrogenase; TIGRFAM: ureidoglycolate dehydrogenase; PFAM: Malate/L-lactate dehydrogenase; ureidoglycolate dehydrogenase 344251 10211262 Rahaq_0302 Rahnella sp. Y9602 ureidoglycolate dehydrogenase YP_004211059.1 343202 R 741091 CDS YP_004211060.1 322831033 10211263 344549..346216 1 NC_015061.1 KEGG: eok:G2583_0638 bacterial FdrA protein; membrane protein FdrA 346216 10211263 Rahaq_0303 Rahnella sp. Y9602 membrane protein FdrA YP_004211060.1 344549 D 741091 CDS YP_004211061.1 322831034 10211264 346250..347518 1 NC_015061.1 PFAM: protein of unknown function DUF1116; KEGG: set:SEN0511 hypothetical protein; hypothetical protein 347518 10211264 Rahaq_0304 Rahnella sp. Y9602 hypothetical protein YP_004211061.1 346250 D 741091 CDS YP_004211062.1 322831035 10211265 347515..348276 1 NC_015061.1 KEGG: sbc:SbBS512_E0454 hypothetical protein; hypothetical protein 348276 10211265 Rahaq_0305 Rahnella sp. Y9602 hypothetical protein YP_004211062.1 347515 D 741091 CDS YP_004211063.1 322831036 10211266 348286..349185 1 NC_015061.1 TIGRFAM: carbamate kinase; KEGG: eum:ECUMN_0561 carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase; carbamate kinase 349185 10211266 Rahaq_0306 Rahnella sp. Y9602 carbamate kinase YP_004211063.1 348286 D 741091 CDS YP_004211064.1 322831037 10211267 complement(349217..349462) 1 NC_015061.1 PFAM: protein of unknown function UPF0270; KEGG: spe:Spro_4577 hypothetical protein; hypothetical protein 349462 10211267 Rahaq_0307 Rahnella sp. Y9602 hypothetical protein YP_004211064.1 349217 R 741091 CDS YP_004211065.1 322831038 10211268 complement(349459..350454) 1 NC_015061.1 PFAM: alpha/beta hydrolase fold; KEGG: ypb:YPTS_3916 hydrolase; alpha/beta hydrolase 350454 10211268 Rahaq_0308 Rahnella sp. Y9602 alpha/beta hydrolase YP_004211065.1 349459 R 741091 CDS YP_004211066.1 322831039 10211269 350555..351157 1 NC_015061.1 PFAM: lysine exporter protein (LYSE/YGGA); KEGG: yen:YE3950 ABC-transport protein; lysine exporter protein LysE/YggA 351157 10211269 Rahaq_0309 Rahnella sp. Y9602 lysine exporter protein LysE/YggA YP_004211066.1 350555 D 741091 CDS YP_004211067.1 322831040 10211270 complement(351218..353134) 1 NC_015061.1 KEGG: yen:YE3942 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 353134 10211270 Rahaq_0310 Rahnella sp. Y9602 ABC transporter YP_004211067.1 351218 R 741091 CDS YP_004211068.1 322831041 10211271 353264..353818 1 NC_015061.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: spe:Spro_4561 glutathione-regulated potassium-efflux system ancillary protein KefG; NAD(P)H dehydrogenase (quinone) 353818 10211271 Rahaq_0311 Rahnella sp. Y9602 NAD(P)H dehydrogenase (quinone) YP_004211068.1 353264 D 741091 CDS YP_004211069.1 322831042 10211272 353818..355626 1 NC_015061.1 KEGG: yen:YE3940 glutathione-regulated potassium-efflux system protein KefB; TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; potassium efflux system protein 355626 10211272 Rahaq_0312 Rahnella sp. Y9602 potassium efflux system protein YP_004211069.1 353818 D 741091 CDS YP_004211070.1 322831043 10211273 355705..355908 1 NC_015061.1 PFAM: Conserved hypothetical protein CHP02443; KEGG: spe:Spro_4559 hypothetical protein; hypothetical protein 355908 10211273 Rahaq_0313 Rahnella sp. Y9602 hypothetical protein YP_004211070.1 355705 D 741091 CDS YP_004211071.1 322831044 10211274 356107..356712 1 NC_015061.1 KEGG: spe:Spro_4558 FKBP-type peptidyl-prolyl cis-trans isomerase; PFAM: peptidylprolyl isomerase FKBP-type; Peptidylprolyl isomerase 356712 10211274 Rahaq_0314 Rahnella sp. Y9602 Peptidylprolyl isomerase YP_004211071.1 356107 D 741091 CDS YP_004211072.1 322831045 10211275 complement(356790..357011) 1 NC_015061.1 PFAM: SlyX family protein; KEGG: ypb:YPTS_3903 hypothetical protein; SlyX family protein 357011 10211275 Rahaq_0315 Rahnella sp. Y9602 SlyX family protein YP_004211072.1 356790 R 741091 CDS YP_004211073.1 322831046 10211276 357302..358156 1 NC_015061.1 KEGG: spe:Spro_4556 FKBP-type peptidyl-prolyl cis-trans isomerase; PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; Peptidylprolyl isomerase 358156 10211276 Rahaq_0316 Rahnella sp. Y9602 Peptidylprolyl isomerase YP_004211073.1 357302 D 741091 CDS YP_004211074.1 322831047 10211277 358421..359143 1 NC_015061.1 PFAM: YheO-like domain-containing protein; KEGG: yen:YE3934 DNA-binding protein; hypothetical protein 359143 10211277 Rahaq_0317 Rahnella sp. Y9602 hypothetical protein YP_004211074.1 358421 D 741091 CDS YP_004211075.1 322831048 10211278 359140..359532 1 NC_015061.1 KEGG: ypb:YPTS_3900 sulfur transfer complex subunit TusD; TIGRFAM: sulfur relay protein TusD/DsrE; PFAM: DsrE family protein; sulfur relay protein TusD/DsrE 359532 10211278 Rahaq_0318 Rahnella sp. Y9602 sulfur relay protein TusD/DsrE YP_004211075.1 359140 D 741091 CDS YP_004211076.1 322831049 10211279 359555..359914 1 NC_015061.1 KEGG: ddc:Dd586_3745 sulfur relay protein TusC/DsrF; TIGRFAM: sulfur relay protein TusC/DsrF; PFAM: DsrE family protein; sulfur relay protein TusC/DsrF 359914 10211279 Rahaq_0319 Rahnella sp. Y9602 sulfur relay protein TusC/DsrF YP_004211076.1 359555 D 741091 CDS YP_004211077.1 322831050 10211280 359928..360215 1 NC_015061.1 KEGG: yen:YE3931 sulfur transfer complex subunit TusB; TIGRFAM: sulfur relay protein TusB/DsrH; PFAM: DsrH family protein; sulfur relay protein TusB/DsrH 360215 10211280 Rahaq_0320 Rahnella sp. Y9602 sulfur relay protein TusB/DsrH YP_004211077.1 359928 D 741091 CDS YP_004211078.1 322831051 10211281 360359..360733 1 NC_015061.1 KEGG: dze:Dd1591_0316 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23; 30S ribosomal protein S12 360733 10211281 Rahaq_0321 Rahnella sp. Y9602 30S ribosomal protein S12 YP_004211078.1 360359 D 741091 CDS YP_004211079.1 322831052 10211282 360830..361300 1 NC_015061.1 KEGG: pwa:Pecwa_4008 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7; 30S ribosomal protein S7 361300 10211282 Rahaq_0322 Rahnella sp. Y9602 30S ribosomal protein S7 YP_004211079.1 360830 D 741091 CDS YP_004211080.1 322831053 10211283 361397..363511 1 NC_015061.1 KEGG: spe:Spro_4549 elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein; translation elongation factor G 363511 10211283 Rahaq_0323 Rahnella sp. Y9602 translation elongation factor G YP_004211080.1 361397 D 741091 CDS YP_004211081.1 322831054 10211284 363583..364767 1 NC_015061.1 KEGG: spe:Spro_4548 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein; translation elongation factor Tu 364767 10211284 Rahaq_0324 Rahnella sp. Y9602 translation elongation factor Tu YP_004211081.1 363583 D 741091 CDS YP_004211082.1 322831055 10211285 364914..365108 1 NC_015061.1 KEGG: enc:ECL_04701 bacterioferritin-associated ferredoxin; manually curated; PFAM: BFD domain protein [2Fe-2S]-binding domain protein; BFD (2Fe-2S)-binding domain-containing protein 365108 10211285 Rahaq_0325 Rahnella sp. Y9602 BFD (2Fe-2S)-binding domain-containing protein YP_004211082.1 364914 D 741091 CDS YP_004211083.1 322831056 10211286 365194..365673 1 NC_015061.1 KEGG: ctu:Ctu_38500 bacterioferritin; TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; bacterioferritin 365673 10211286 Rahaq_0326 Rahnella sp. Y9602 bacterioferritin YP_004211083.1 365194 D 741091 CDS YP_004211084.1 322831057 10211287 complement(365685..366518) 1 NC_015061.1 KEGG: psp:PSPPH_0818 type IV pilus prepilin peptidase PilD; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; prepilin peptidase 366518 10211287 Rahaq_0327 Rahnella sp. Y9602 prepilin peptidase YP_004211084.1 365685 R 741091 CDS YP_004211085.1 322831058 10211288 complement(366552..367010) 1 NC_015061.1 PFAM: General secretion pathway M protein; KEGG: ppr:PBPRA3472 general secretion pathway protein M; general secretion pathway protein M 367010 10211288 Rahaq_0328 Rahnella sp. Y9602 general secretion pathway protein M YP_004211085.1 366552 R 741091 CDS YP_004211086.1 322831059 10211289 complement(367007..368182) 1 NC_015061.1 KEGG: cko:CKO_02220 hypothetical protein; TIGRFAM: general secretion pathway protein L; PFAM: General secretion pathway L; general secretion pathway protein L 368182 10211289 Rahaq_0329 Rahnella sp. Y9602 general secretion pathway protein L YP_004211086.1 367007 R 741091 CDS YP_004211087.1 322831060 10211290 complement(368183..369169) 1 NC_015061.1 KEGG: ecz:ECS88_3720 general secretory pathway component, cryptic; general secretory pathway component, cryptic 369169 10211290 Rahaq_0330 Rahnella sp. Y9602 general secretory pathway component, cryptic YP_004211087.1 368183 R 741091 CDS YP_004211088.1 322831061 10211291 complement(369162..369845) 1 NC_015061.1 TIGRFAM: general secretion pathway protein J; KEGG: tau:Tola_0361 general secretion pathway protein J; general secretion pathway protein J 369845 10211291 Rahaq_0331 Rahnella sp. Y9602 general secretion pathway protein J YP_004211088.1 369162 R 741091 CDS YP_004211089.1 322831062 10211292 complement(369842..370231) 1 NC_015061.1 KEGG: enc:ECL_02793 general secretion pathway protein I; TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; general secretion pathway protein I 370231 10211292 Rahaq_0332 Rahnella sp. Y9602 general secretion pathway protein I YP_004211089.1 369842 R 741091 CDS YP_004211090.1 322831063 10211293 complement(370231..370752) 1 NC_015061.1 TIGRFAM: general secretion pathway protein H; KEGG: enc:ECL_02794 general secretion pathway protein H; general secretion pathway protein H 370752 10211293 Rahaq_0333 Rahnella sp. Y9602 general secretion pathway protein H YP_004211090.1 370231 R 741091 CDS YP_004211091.1 322831064 10211294 complement(370755..371210) 1 NC_015061.1 KEGG: enc:ECL_02795 general secretion pathway protein G; TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; general secretion pathway protein G 371210 10211294 Rahaq_0334 Rahnella sp. Y9602 general secretion pathway protein G YP_004211091.1 370755 R 741091 CDS YP_004211092.1 322831065 10211295 complement(371223..372440) 1 NC_015061.1 KEGG: ecz:ECS88_3715 general secretory pathway component, cryptic; TIGRFAM: general secretion pathway protein F; PFAM: Type II secretion system F domain; general secretion pathway protein F 372440 10211295 Rahaq_0335 Rahnella sp. Y9602 general secretion pathway protein F YP_004211092.1 371223 R 741091 CDS YP_004211093.1 322831066 10211296 complement(372437..373963) 1 NC_015061.1 TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; KEGG: enc:ECL_02797 general secretion pathway protein E; SMART: AAA ATPase; general secretory pathway protein E 373963 10211296 Rahaq_0336 Rahnella sp. Y9602 general secretory pathway protein E YP_004211093.1 372437 R 741091 CDS YP_004211094.1 322831067 10211297 complement(373967..375946) 1 NC_015061.1 KEGG: cro:ROD_44971 T2SS protein D; TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; general secretion pathway protein D 375946 10211297 Rahaq_0337 Rahnella sp. Y9602 general secretion pathway protein D YP_004211094.1 373967 R 741091 CDS YP_004211095.1 322831068 10211298 complement(375930..376763) 1 NC_015061.1 KEGG: enc:ECL_02799 general secretion pathway protein C; hypothetical protein 376763 10211298 Rahaq_0338 Rahnella sp. Y9602 hypothetical protein YP_004211095.1 375930 R 741091 CDS YP_004211096.1 322831069 10211299 376950..378482 1 NC_015061.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: cko:CKO_02233 hypothetical protein; peptidoglycan-binding domain 1 protein 378482 10211299 Rahaq_0339 Rahnella sp. Y9602 peptidoglycan-binding domain 1 protein YP_004211096.1 376950 D 741091 CDS YP_004211097.1 322831070 10211300 378489..378974 1 NC_015061.1 KEGG: pop:POPTR_785446 hypothetical protein; hypothetical protein 378974 10211300 Rahaq_0340 Rahnella sp. Y9602 hypothetical protein YP_004211097.1 378489 D 741091 CDS YP_004211098.1 322831071 10211301 379209..379520 1 NC_015061.1 KEGG: ent:Ent638_3752 SSU ribosomal protein S10P; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10; 30S ribosomal protein S10 379520 10211301 Rahaq_0341 Rahnella sp. Y9602 30S ribosomal protein S10 YP_004211098.1 379209 D 741091 CDS YP_004211099.1 322831072 10211302 379554..380183 1 NC_015061.1 KEGG: spe:Spro_4544 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3; 50S ribosomal protein L3 380183 10211302 Rahaq_0342 Rahnella sp. Y9602 50S ribosomal protein L3 YP_004211099.1 379554 D 741091 CDS YP_004211100.1 322831073 10211303 380200..380805 1 NC_015061.1 PFAM: ribosomal protein L4/L1e; KEGG: spe:Spro_4543 50S ribosomal protein L4; 50S ribosomal protein L4 380805 10211303 Rahaq_0343 Rahnella sp. Y9602 50S ribosomal protein L4 YP_004211100.1 380200 D 741091 CDS YP_004211101.1 322831074 10211304 380802..381104 1 NC_015061.1 PFAM: Ribosomal protein L25/L23; KEGG: yen:YE3921 50S ribosomal protein L23; 50S ribosomal protein L25 381104 10211304 Rahaq_0344 Rahnella sp. Y9602 50S ribosomal protein L25 YP_004211101.1 380802 D 741091 CDS YP_004211102.1 322831075 10211305 381123..381947 1 NC_015061.1 KEGG: ypb:YPTS_3887 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2; 50S ribosomal protein L2 381947 10211305 Rahaq_0345 Rahnella sp. Y9602 50S ribosomal protein L2 YP_004211102.1 381123 D 741091 CDS YP_004211103.1 322831076 10211306 381962..382240 1 NC_015061.1 KEGG: pwa:Pecwa_3997 30S ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; 30S ribosomal protein S19 382240 10211306 Rahaq_0346 Rahnella sp. Y9602 30S ribosomal protein S19 YP_004211103.1 381962 D 741091 CDS YP_004211104.1 322831077 10211307 382255..382587 1 NC_015061.1 KEGG: spe:Spro_4539 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; 50S ribosomal protein L22 382587 10211307 Rahaq_0347 Rahnella sp. Y9602 50S ribosomal protein L22 YP_004211104.1 382255 D 741091 CDS YP_004211105.1 322831078 10211308 382605..383303 1 NC_015061.1 TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; KEGG: kva:Kvar_0389 ribosomal protein S3; SMART: KH domain protein; 30S ribosomal protein S3 383303 10211308 Rahaq_0348 Rahnella sp. Y9602 30S ribosomal protein S3 YP_004211105.1 382605 D 741091 CDS YP_004211106.1 322831079 10211309 383316..383726 1 NC_015061.1 KEGG: ctu:Ctu_38400 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; 50S ribosomal protein L16 383726 10211309 Rahaq_0349 Rahnella sp. Y9602 50S ribosomal protein L16 YP_004211106.1 383316 D 741091 CDS YP_004211107.1 322831080 10211310 383726..383917 1 NC_015061.1 KEGG: ctu:Ctu_38390 50S ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; 50S ribosomal protein L29 383917 10211310 Rahaq_0350 Rahnella sp. Y9602 50S ribosomal protein L29 YP_004211107.1 383726 D 741091 CDS YP_004211108.1 322831081 10211311 383917..384171 1 NC_015061.1 KEGG: etr:ETAE_3221 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17; 30S ribosomal protein S17 384171 10211311 Rahaq_0351 Rahnella sp. Y9602 30S ribosomal protein S17 YP_004211108.1 383917 D 741091 CDS YP_004211109.1 322831082 10211312 384343..384714 1 NC_015061.1 KEGG: spe:Spro_4534 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; 50S ribosomal protein L14 384714 10211312 Rahaq_0352 Rahnella sp. Y9602 50S ribosomal protein L14 YP_004211109.1 384343 D 741091 CDS YP_004211110.1 322831083 10211313 384725..385039 1 NC_015061.1 TIGRFAM: ribosomal protein L24; KEGG: ebi:EbC_41190 50S ribosomal protein L24; 50S ribosomal protein L24 385039 10211313 Rahaq_0353 Rahnella sp. Y9602 50S ribosomal protein L24 YP_004211110.1 384725 D 741091 CDS YP_004211111.1 322831084 10211314 385054..385593 1 NC_015061.1 KEGG: etr:ETAE_3218 50S ribosomal protein L5; 50S ribosomal protein L5 385593 10211314 Rahaq_0354 Rahnella sp. Y9602 50S ribosomal protein L5 YP_004211111.1 385054 D 741091 CDS YP_004211112.1 322831085 10211315 385607..385912 1 NC_015061.1 PFAM: ribosomal protein S14; KEGG: pwa:Pecwa_3988 30S ribosomal protein S14; 30S ribosomal protein S14 385912 10211315 Rahaq_0355 Rahnella sp. Y9602 30S ribosomal protein S14 YP_004211112.1 385607 D 741091 CDS YP_004211113.1 322831086 10211316 385946..386338 1 NC_015061.1 PFAM: ribosomal protein S8; KEGG: etr:ETAE_3216 30S ribosomal protein S8; 30S ribosomal protein S8 386338 10211316 Rahaq_0356 Rahnella sp. Y9602 30S ribosomal protein S8 YP_004211113.1 385946 D 741091 CDS YP_004211114.1 322831087 10211317 386352..386885 1 NC_015061.1 KEGG: ypb:YPTS_3875 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain; 50S ribosomal protein L6 386885 10211317 Rahaq_0357 Rahnella sp. Y9602 50S ribosomal protein L6 YP_004211114.1 386352 D 741091 CDS YP_004211115.1 322831088 10211318 386895..387248 1 NC_015061.1 KEGG: ent:Ent638_3735 50S ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; 50S ribosomal protein L18 387248 10211318 Rahaq_0358 Rahnella sp. Y9602 50S ribosomal protein L18 YP_004211115.1 386895 D 741091 CDS YP_004211116.1 322831089 10211319 387263..387763 1 NC_015061.1 KEGG: pwa:Pecwa_3984 30S ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: ribosomal protein S5 domain protein; Ribosomal protein S5; 30S ribosomal protein S5 387763 10211319 Rahaq_0359 Rahnella sp. Y9602 30S ribosomal protein S5 YP_004211116.1 387263 D 741091 CDS YP_004211117.1 322831090 10211320 387770..387949 1 NC_015061.1 KEGG: spe:Spro_4526 50S ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30; 50S ribosomal protein L30 387949 10211320 Rahaq_0360 Rahnella sp. Y9602 50S ribosomal protein L30 YP_004211117.1 387770 D 741091 CDS YP_004211118.1 322831091 10211321 387953..388387 1 NC_015061.1 TIGRFAM: ribosomal protein L15; KEGG: ypb:YPTS_3871 50S ribosomal protein L15; 50S ribosomal protein L15 388387 10211321 Rahaq_0361 Rahnella sp. Y9602 50S ribosomal protein L15 YP_004211118.1 387953 D 741091 CDS YP_004211119.1 322831092 10211322 388395..389726 1 NC_015061.1 KEGG: spe:Spro_4524 preprotein translocase subunit SecY; TIGRFAM: preprotein translocase SecY subunit; PFAM: SecY protein; preprotein translocase subunit SecY 389726 10211322 Rahaq_0362 Rahnella sp. Y9602 preprotein translocase subunit SecY YP_004211119.1 388395 D 741091 CDS YP_004211120.1 322831093 10211323 389760..389876 1 NC_015061.1 KEGG: sgl:SG2257 50S ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; 50S ribosomal protein L36 389876 10211323 Rahaq_0363 Rahnella sp. Y9602 50S ribosomal protein L36 YP_004211120.1 389760 D 741091 CDS YP_004211121.1 322831094 10211324 390025..390381 1 NC_015061.1 KEGG: yen:YE3901 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13; 30S ribosomal protein S13 390381 10211324 Rahaq_0364 Rahnella sp. Y9602 30S ribosomal protein S13 YP_004211121.1 390025 D 741091 CDS YP_004211122.1 322831095 10211325 390399..390788 1 NC_015061.1 KEGG: spe:Spro_4521 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11; 30S ribosomal protein S11 390788 10211325 Rahaq_0365 Rahnella sp. Y9602 30S ribosomal protein S11 YP_004211122.1 390399 D 741091 CDS YP_004211123.1 322831096 10211326 390819..391439 1 NC_015061.1 TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: ddd:Dda3937_01514 30S ribosomal subunit protein S4; SMART: RNA-binding S4 domain protein; 30S ribosomal protein S4 391439 10211326 Rahaq_0366 Rahnella sp. Y9602 30S ribosomal protein S4 YP_004211123.1 390819 D 741091 CDS YP_004211124.1 322831097 10211327 391465..392454 1 NC_015061.1 TIGRFAM: DNA-directed RNA polymerase, subunit alpha; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase subunit alpha domain protein; KEGG: spe:Spro_4519 DNA-directed RNA polymerase subunit alpha; SMART: RNA polymerase RpoA/D/Rpb3-type; DNA-directed RNA polymerase subunit alpha 392454 10211327 Rahaq_0367 Rahnella sp. Y9602 DNA-directed RNA polymerase subunit alpha YP_004211124.1 391465 D 741091 CDS YP_004211125.1 322831098 10211328 392495..392884 1 NC_015061.1 KEGG: spe:Spro_4518 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; 50S ribosomal protein L17 392884 10211328 Rahaq_0368 Rahnella sp. Y9602 50S ribosomal protein L17 YP_004211125.1 392495 D 741091 CDS YP_004211126.1 322831099 10211329 393057..393425 1 NC_015061.1 PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; KEGG: kpu:KP1_5012 hypothetical protein; DnaJ family protein 393425 10211329 Rahaq_0369 Rahnella sp. Y9602 DnaJ family protein YP_004211126.1 393057 D 741091 CDS YP_004211127.1 322831100 10211330 393428..393844 1 NC_015061.1 TIGRFAM: Zn(II)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: spe:Spro_4517 zinc-responsive transcriptional regulator; SMART: regulatory protein MerR; MerR family transcriptional regulator 393844 10211330 Rahaq_0370 Rahnella sp. Y9602 MerR family transcriptional regulator YP_004211127.1 393428 D 741091 CDS YP_004211128.1 322831101 10211331 393941..394141 1 NC_015061.1 PFAM: protein of unknown function DUF331; KEGG: xne:XNC1_0346 hypothetical protein; hypothetical protein 394141 10211331 Rahaq_0371 Rahnella sp. Y9602 hypothetical protein YP_004211128.1 393941 D 741091 CDS YP_004211129.1 322831102 10211332 complement(394157..394573) 1 NC_015061.1 KEGG: spe:Spro_4515 large-conductance mechanosensitive channel; TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; large conductance mechanosensitive channel protein 394573 10211332 Rahaq_0372 Rahnella sp. Y9602 large conductance mechanosensitive channel protein YP_004211129.1 394157 R 741091 CDS YP_004211130.1 322831103 10211333 complement(394698..396074) 1 NC_015061.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: spe:Spro_4514 potassium transporter peripheral membrane component; TrkA-N domain-containing protein 396074 10211333 Rahaq_0373 Rahnella sp. Y9602 TrkA-N domain-containing protein YP_004211130.1 394698 R 741091 CDS YP_004211131.1 322831104 10211334 complement(396135..397424) 1 NC_015061.1 KEGG: spe:Spro_4513 16S rRNA methyltransferase B; TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; sun protein 397424 10211334 Rahaq_0374 Rahnella sp. Y9602 sun protein YP_004211131.1 396135 R 741091 CDS YP_004211132.1 322831105 10211335 complement(397500..398435) 1 NC_015061.1 TIGRFAM: methionyl-tRNA formyltransferase; KEGG: yen:YE3890 methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; methionyl-tRNA formyltransferase 398435 10211335 Rahaq_0375 Rahnella sp. Y9602 methionyl-tRNA formyltransferase YP_004211132.1 397500 R 741091 CDS YP_004211133.1 322831106 10211336 complement(398461..398973) 1 NC_015061.1 KEGG: yen:YE3889 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 398973 10211336 Rahaq_0376 Rahnella sp. Y9602 peptide deformylase YP_004211133.1 398461 R 741091 CDS YP_004211134.1 322831107 10211337 399102..400271 1 NC_015061.1 KEGG: dda:Dd703_0440 DNA protecting protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; DNA protecting protein DprA 400271 10211337 Rahaq_0377 Rahnella sp. Y9602 DNA protecting protein DprA YP_004211134.1 399102 D 741091 CDS YP_004211135.1 322831108 10211338 400243..400716 1 NC_015061.1 PFAM: protein of unknown function DUF494; KEGG: spe:Spro_4509 hypothetical protein; hypothetical protein 400716 10211338 Rahaq_0378 Rahnella sp. Y9602 hypothetical protein YP_004211135.1 400243 D 741091 CDS YP_004211136.1 322831109 10211339 400741..401301 1 NC_015061.1 PFAM: DNA topoisomerase type IA zn finger domain protein; KEGG: yen:YE3886 DNA-binding protein; DNA topoisomerase type IA zn finger domain-containing protein 401301 10211339 Rahaq_0379 Rahnella sp. Y9602 DNA topoisomerase type IA zn finger domain-containing protein YP_004211136.1 400741 D 741091 CDS YP_004211137.1 322831110 10211340 401294..401863 1 NC_015061.1 PFAM: SUA5/yciO/yrdC domain; KEGG: eca:ECA3996 DNA topoisomerase; SUA5/yciO/yrdC domain-containing protein 401863 10211340 Rahaq_0380 Rahnella sp. Y9602 SUA5/yciO/yrdC domain-containing protein YP_004211137.1 401294 D 741091 CDS YP_004211138.1 322831111 10211341 401867..402694 1 NC_015061.1 KEGG: yen:YE3884 shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; shikimate 5-dehydrogenase 402694 10211341 Rahaq_0381 Rahnella sp. Y9602 shikimate 5-dehydrogenase YP_004211138.1 401867 D 741091 CDS YP_004211139.1 322831112 10211342 complement(402746..403288) 1 NC_015061.1 KEGG: ebi:EbC_40910 transferase; transferase 403288 10211342 Rahaq_0382 Rahnella sp. Y9602 transferase YP_004211139.1 402746 R 741091 CDS YP_004211140.1 322831113 10211350 complement(409476..411143) 1 NC_015061.1 KEGG: spe:Spro_0295 acetate permease; TIGRFAM: cation/acetate symporter ActP; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; cation/acetate symporter ActP 411143 10211350 Rahaq_0383 Rahnella sp. Y9602 cation/acetate symporter ActP YP_004211140.1 409476 R 741091 CDS YP_004211141.1 322831114 10211351 complement(411140..411451) 1 NC_015061.1 PFAM: protein of unknown function DUF485; KEGG: yen:YE0308 hypothetical protein; hypothetical protein 411451 10211351 Rahaq_0384 Rahnella sp. Y9602 hypothetical protein YP_004211141.1 411140 R 741091 CDS YP_004211142.1 322831115 10211352 complement(411507..413468) 1 NC_015061.1 KEGG: spe:Spro_0297 acetyl-CoA synthetase; TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase; acetate/CoA ligase 413468 10211352 Rahaq_0385 Rahnella sp. Y9602 acetate/CoA ligase YP_004211142.1 411507 R 741091 CDS YP_004211143.1 322831116 10211353 413984..414562 1 NC_015061.1 PFAM: Fimbrial protein domain-containing protein; KEGG: ypi:YpsIP31758_4107 fimbrial protein; fimbrial protein domain-containing protein 414562 10211353 Rahaq_0386 Rahnella sp. Y9602 fimbrial protein domain-containing protein YP_004211143.1 413984 D 741091 CDS YP_004211144.1 322831117 10211354 414664..417165 1 NC_015061.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: yps:YPTB3895 outer membrane fimbrial usher porin; fimbrial biogenesis outer membrane usher protein 417165 10211354 Rahaq_0387 Rahnella sp. Y9602 fimbrial biogenesis outer membrane usher protein YP_004211144.1 414664 D 741091 CDS YP_004211145.1 322831118 10211355 417212..417949 1 NC_015061.1 PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: ypb:YPTS_4111 pili assembly chaperone, N-terminal; Pili assembly chaperone, N-terminal protein 417949 10211355 Rahaq_0388 Rahnella sp. Y9602 Pili assembly chaperone, N-terminal protein YP_004211145.1 417212 D 741091 CDS YP_004211146.1 322831119 10211356 417959..418930 1 NC_015061.1 KEGG: ypi:YpsIP31758_4104 hypothetical protein; hypothetical protein 418930 10211356 Rahaq_0389 Rahnella sp. Y9602 hypothetical protein YP_004211146.1 417959 D 741091 CDS YP_004211147.1 322831120 10211357 418958..419230 1 NC_015061.1 KEGG: plu:plu0900 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 419230 10211357 Rahaq_0390 Rahnella sp. Y9602 helix-turn-helix domain-containing protein YP_004211147.1 418958 D 741091 CDS YP_004211148.1 322831121 10211358 complement(419255..419812) 1 NC_015061.1 KEGG: pfh:PFHG_01390 conserved hypothetical protein; hypothetical protein 419812 10211358 Rahaq_0391 Rahnella sp. Y9602 hypothetical protein YP_004211148.1 419255 R 741091 CDS YP_004211149.1 322831122 10211359 complement(419802..420683) 1 NC_015061.1 PFAM: transcriptional regulator domain-containing protein; KEGG: spe:Spro_1500 transcriptional regulator, CadC; CadC family transcriptional regulator 420683 10211359 Rahaq_0392 Rahnella sp. Y9602 CadC family transcriptional regulator YP_004211149.1 419802 R 741091 CDS YP_004211150.1 322831123 10211360 complement(420932..421960) 1 NC_015061.1 PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: dze:Dd1591_1452 peptidase U61 LD-carboxypeptidase A; peptidase U61 LD-carboxypeptidase A 421960 10211360 Rahaq_0393 Rahnella sp. Y9602 peptidase U61 LD-carboxypeptidase A YP_004211150.1 420932 R 741091 CDS YP_004211151.1 322831124 10211361 complement(422052..423368) 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: bmj:BMULJ_06130 sugar transporter; major facilitator superfamily protein 423368 10211361 Rahaq_0394 Rahnella sp. Y9602 major facilitator superfamily protein YP_004211151.1 422052 R 741091 CDS YP_004211152.1 322831125 10211362 complement(423361..424521) 1 NC_015061.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bmj:BMULJ_06131 mandelate racemase (MR)-like subfamily protein of the enolase superfamily; mandelate racemase/muconate lactonizing protein 424521 10211362 Rahaq_0395 Rahnella sp. Y9602 mandelate racemase/muconate lactonizing protein YP_004211152.1 423361 R 741091 CDS YP_004211153.1 322831126 10211364 complement(424948..425523) 1 NC_015061.1 KEGG: yen:YE0346 transcriptional regulator; transcriptional regulator 425523 10211364 Rahaq_0396 Rahnella sp. Y9602 transcriptional regulator YP_004211153.1 424948 R 741091 CDS YP_004211154.1 322831127 10211365 complement(425567..427303) 1 NC_015061.1 KEGG: spe:Spro_0403 thiol:disulfide interchange protein precursor; PFAM: cytochrome c biogenesis protein transmembrane region; Thioredoxin domain-containing protein; Protein-disulfide reductase 427303 10211365 Rahaq_0397 Rahnella sp. Y9602 Protein-disulfide reductase YP_004211154.1 425567 R 741091 CDS YP_004211155.1 322831128 10211366 complement(427474..428775) 1 NC_015061.1 KEGG: spe:Spro_0405 anaerobic C4-dicarboxylate transporter; TIGRFAM: anaerobic c4-dicarboxylate antiporter, Dcu family; PFAM: anaerobic c4-dicarboxylate membrane transporter; anaerobic C4-dicarboxylate transporter 428775 10211366 Rahaq_0398 Rahnella sp. Y9602 anaerobic C4-dicarboxylate transporter YP_004211155.1 427474 R 741091 CDS YP_004211156.1 322831129 10211367 complement(428911..430347) 1 NC_015061.1 KEGG: spe:Spro_0406 aspartate ammonia-lyase; TIGRFAM: aspartate ammonia-lyase; PFAM: fumarate lyase; Fumarase C-like; aspartate ammonia-lyase 430347 10211367 Rahaq_0399 Rahnella sp. Y9602 aspartate ammonia-lyase YP_004211156.1 428911 R 741091 CDS YP_004211157.1 322831130 10211368 430721..431212 1 NC_015061.1 PFAM: FxsA cytoplasmic membrane protein; KEGG: spe:Spro_0407 FxsA cytoplasmic membrane protein; FxsA cytoplasmic membrane protein 431212 10211368 Rahaq_0400 Rahnella sp. Y9602 FxsA cytoplasmic membrane protein YP_004211157.1 430721 D 741091 CDS YP_004211158.1 322831131 10211369 431427..431720 1 NC_015061.1 PFAM: Chaperonin Cpn10; KEGG: dze:Dd1591_3530 co-chaperonin GroES; chaperonin Cpn10 431720 10211369 Rahaq_0401 Rahnella sp. Y9602 chaperonin Cpn10 YP_004211158.1 431427 D 741091 CDS YP_004211159.1 322831132 10211370 431774..433420 1 NC_015061.1 KEGG: ypb:YPTS_0431 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; molecular chaperone GroEL 433420 10211370 Rahaq_0402 Rahnella sp. Y9602 molecular chaperone GroEL YP_004211159.1 431774 D 741091 CDS YP_004211160.1 322831133 10211371 433709..434065 1 NC_015061.1 manually curated; KEGG: spe:Spro_0410 hypothetical protein; hypothetical protein 434065 10211371 Rahaq_0403 Rahnella sp. Y9602 hypothetical protein YP_004211160.1 433709 D 741091 CDS YP_004211161.1 322831134 10211373 complement(434254..435282) 1 NC_015061.1 TIGRFAM: lysine 2,3-aminomutase YodO family protein; KEGG: ypi:YpsIP31758_3673 KamA family iron-sulfur cluster-binding protein; PFAM: Radical SAM domain protein; lysine 2,3-aminomutase YodO family protein 435282 10211373 Rahaq_0405 Rahnella sp. Y9602 lysine 2,3-aminomutase YodO family protein YP_004211161.1 434254 R 741091 CDS YP_004211162.1 322831135 10211374 435321..435887 1 NC_015061.1 KEGG: spe:Spro_0412 elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor KOW-like domain-containing protein; Elongation factor P/YeiP protein; translation elongation factor P 435887 10211374 Rahaq_0406 Rahnella sp. Y9602 translation elongation factor P YP_004211162.1 435321 D 741091 CDS YP_004211163.1 322831136 10211375 435983..436111 1 NC_015061.1 PFAM: Entericidin EcnAB; KEGG: spe:Spro_0413 entericidin EcnAB; entericidin EcnAB 436111 10211375 Rahaq_0407 Rahnella sp. Y9602 entericidin EcnAB YP_004211163.1 435983 D 741091 CDS YP_004211164.1 322831137 10211376 436230..436364 1 NC_015061.1 PFAM: Entericidin EcnAB; KEGG: ebi:EbC_04350 entericidin B; entericidin EcnAB 436364 10211376 Rahaq_0408 Rahnella sp. Y9602 entericidin EcnAB YP_004211164.1 436230 D 741091 CDS YP_004211165.1 322831138 10211377 complement(436454..436978) 1 NC_015061.1 PFAM: Lipocalin family protein; KEGG: yen:YE0360 outer membrane lipoprotein Blc; lipocalin family protein 436978 10211377 Rahaq_0409 Rahnella sp. Y9602 lipocalin family protein YP_004211165.1 436454 R 741091 CDS YP_004211166.1 322831139 10211378 complement(437103..437462) 1 NC_015061.1 PFAM: fumarate reductase D subunit; KEGG: sbo:SBO_4305 fumarate reductase subunit D; fumarate reductase D subunit 437462 10211378 Rahaq_0410 Rahnella sp. Y9602 fumarate reductase D subunit YP_004211166.1 437103 R 741091 CDS YP_004211167.1 322831140 10211379 complement(437472..437882) 1 NC_015061.1 PFAM: fumarate reductase subunit C; KEGG: esa:ESA_00163 fumarate reductase subunit C; fumarate reductase subunit C 437882 10211379 Rahaq_0411 Rahnella sp. Y9602 fumarate reductase subunit C YP_004211167.1 437472 R 741091 CDS YP_004211168.1 322831141 10211380 complement(437894..438628) 1 NC_015061.1 KEGG: ddd:Dda3937_02146 fumarate reductase (anaerobic), Fe-S subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; succinate dehydrogenase and fumarate reductase iron-sulfur protein 438628 10211380 Rahaq_0412 Rahnella sp. Y9602 succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_004211168.1 437894 R 741091 CDS YP_004211169.1 322831142 10211381 complement(438621..440420) 1 NC_015061.1 KEGG: spe:Spro_0419 fumarate reductase flavoprotein subunit; TIGRFAM: fumarate reductase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; fumarate reductase flavoprotein subunit 440420 10211381 Rahaq_0413 Rahnella sp. Y9602 fumarate reductase flavoprotein subunit YP_004211169.1 438621 R 741091 CDS YP_004211170.1 322831143 10211382 440704..441681 1 NC_015061.1 KEGG: spe:Spro_0420 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase-related protein GenX; PFAM: tRNA synthetase class II (D K and N); lysyl-tRNA synthetase-like protein GenX 441681 10211382 Rahaq_0414 Rahnella sp. Y9602 lysyl-tRNA synthetase-like protein GenX YP_004211170.1 440704 D 741091 CDS YP_004211171.1 322831144 10211383 441947..443311 1 NC_015061.1 KEGG: ebi:EbC_00110 purine permease; TIGRFAM: xanthine permease; uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; xanthine permease 443311 10211383 Rahaq_0415 Rahnella sp. Y9602 xanthine permease YP_004211171.1 441947 D 741091 CDS YP_004211172.1 322831145 10211384 443406..444764 1 NC_015061.1 KEGG: ebi:EbC_00100 amidohydrolase; PFAM: amidohydrolase; S-adenosylhomocysteine deaminase 444764 10211384 Rahaq_0416 Rahnella sp. Y9602 S-adenosylhomocysteine deaminase YP_004211172.1 443406 D 741091 CDS YP_004211173.1 322831146 10211385 complement(444833..448201) 1 NC_015061.1 PFAM: MscS Mechanosensitive ion channel; KEGG: yps:YPTB0415 hypothetical protein; mechanosensitive ion channel protein MscS 448201 10211385 Rahaq_0417 Rahnella sp. Y9602 mechanosensitive ion channel protein MscS YP_004211173.1 444833 R 741091 CDS YP_004211174.1 322831147 10211386 complement(448249..449226) 1 NC_015061.1 KEGG: spe:Spro_0422 phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related; phosphatidylserine decarboxylase 449226 10211386 Rahaq_0418 Rahnella sp. Y9602 phosphatidylserine decarboxylase YP_004211174.1 448249 R 741091 CDS YP_004211175.1 322831148 10211387 complement(449409..450446) 1 NC_015061.1 KEGG: spe:Spro_0423 ribosome-associated GTPase; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; ribosome small subunit-dependent GTPase A 450446 10211387 Rahaq_0419 Rahnella sp. Y9602 ribosome small subunit-dependent GTPase A YP_004211175.1 449409 R 741091 CDS YP_004211176.1 322831149 10211388 450573..451127 1 NC_015061.1 KEGG: yen:YE0369 oligoribonuclease; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; Exonuclease RNase T and DNA polymerase III 451127 10211388 Rahaq_0420 Rahnella sp. Y9602 Exonuclease RNase T and DNA polymerase III YP_004211176.1 450573 D 741091 CDS YP_004211177.1 322831150 10211392 complement(451972..453126) 1 NC_015061.1 manually curated; TIGRFAM: iron-sulfur cluster binding protein; KEGG: spe:Spro_0425 iron-sulfur cluster binding protein; PFAM: domain of unknown function DUF1730; iron-sulfur cluster binding protein 453126 10211392 Rahaq_0421 Rahnella sp. Y9602 iron-sulfur cluster binding protein YP_004211177.1 451972 R 741091 CDS YP_004211178.1 322831151 10211393 453125..454639 1 NC_015061.1 KEGG: stm:STM4356 ATP binding site; other site; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain-containing protein; carbohydrate kinase 454639 10211393 Rahaq_0422 Rahnella sp. Y9602 carbohydrate kinase YP_004211178.1 453125 D 741091 CDS YP_004211179.1 322831152 10211394 454650..455117 1 NC_015061.1 PFAM: Uncharacterised protein family UPF0079, ATPase; KEGG: spe:Spro_0427 ATPase; hypothetical protein 455117 10211394 Rahaq_0423 Rahnella sp. Y9602 hypothetical protein YP_004211179.1 454650 D 741091 CDS YP_004211180.1 322831153 10211395 455125..456891 1 NC_015061.1 KEGG: ypz:YPZ3_0369 N-acetylmuramoyl-L-alanine amidase-family protein; PFAM: cell wall hydrolase/autolysin; Peptidoglycan-binding lysin domain; SMART: cell wall hydrolase/autolysin; Peptidoglycan-binding LysM; cell wall hydrolase/autolysin 456891 10211395 Rahaq_0424 Rahnella sp. Y9602 cell wall hydrolase/autolysin YP_004211180.1 455125 D 741091 CDS YP_004211181.1 322831154 10211396 456923..458842 1 NC_015061.1 KEGG: spe:Spro_0429 DNA mismatch repair protein; TIGRFAM: DNA mismatch repair protein MutL; PFAM: DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; MutL dimerisation; DNA mismatch repair protein MutL 458842 10211396 Rahaq_0425 Rahnella sp. Y9602 DNA mismatch repair protein MutL YP_004211181.1 456923 D 741091 CDS YP_004211182.1 322831155 10211397 458835..459776 1 NC_015061.1 TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: spe:Spro_0430 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase 459776 10211397 Rahaq_0426 Rahnella sp. Y9602 tRNA delta(2)-isopentenylpyrophosphate transferase YP_004211182.1 458835 D 741091 CDS YP_004211183.1 322831156 10211398 459891..460199 1 NC_015061.1 KEGG: yen:YE0377 RNA-binding protein Hfq; TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; RNA chaperone Hfq 460199 10211398 Rahaq_0427 Rahnella sp. Y9602 RNA chaperone Hfq YP_004211183.1 459891 D 741091 CDS YP_004211184.1 322831157 10211399 460298..461602 1 NC_015061.1 KEGG: spe:Spro_0432 GTPase HflX; TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; GTP-binding protein HflX 461602 10211399 Rahaq_0428 Rahnella sp. Y9602 GTP-binding protein HflX YP_004211184.1 460298 D 741091 CDS YP_004211185.1 322831158 10211400 461636..462934 1 NC_015061.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: spe:Spro_0433 FtsH protease regulator HflK; SMART: band 7 protein; HflK protein 462934 10211400 Rahaq_0429 Rahnella sp. Y9602 HflK protein YP_004211185.1 461636 D 741091 CDS YP_004211186.1 322831159 10211401 462937..463935 1 NC_015061.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: yen:YE0380 FtsH protease regulator HflC; SMART: band 7 protein; HflC protein 463935 10211401 Rahaq_0430 Rahnella sp. Y9602 HflC protein YP_004211186.1 462937 D 741091 CDS YP_004211187.1 322831160 10211402 464033..464233 1 NC_015061.1 PFAM: Protein of unknown function DUF2065; KEGG: pwa:Pecwa_3915 protein of unknown function DUF2065; hypothetical protein 464233 10211402 Rahaq_0431 Rahnella sp. Y9602 hypothetical protein YP_004211187.1 464033 D 741091 CDS YP_004211188.1 322831161 10211403 464378..465676 1 NC_015061.1 SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: spe:Spro_0436 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; adenylosuccinate synthetase 465676 10211403 Rahaq_0432 Rahnella sp. Y9602 adenylosuccinate synthetase YP_004211188.1 464378 D 741091 CDS YP_004211189.1 322831162 10211404 465904..466329 1 NC_015061.1 KEGG: ypb:YPTS_0460 transcriptional repressor NsrR; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; BadM/Rrf2 family transcriptional regulator 466329 10211404 Rahaq_0433 Rahnella sp. Y9602 BadM/Rrf2 family transcriptional regulator YP_004211189.1 465904 D 741091 CDS YP_004211190.1 322831163 10211405 466371..468869 1 NC_015061.1 TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: ribonuclease II; Ribonuclease B OB region domain; Ribonuclease R winged-helix domain protein; RNA binding S1 domain protein; KEGG: yen:YE0384 exoribonuclease R; SMART: Cold shock protein; ribonuclease R 468869 10211405 Rahaq_0434 Rahnella sp. Y9602 ribonuclease R YP_004211190.1 466371 D 741091 CDS YP_004211191.1 322831164 10211406 468890..469705 1 NC_015061.1 KEGG: yen:YE0385 23S rRNA (guanosine-2'-O-)-methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; TrmH family RNA methyltransferase 469705 10211406 Rahaq_0435 Rahnella sp. Y9602 TrmH family RNA methyltransferase YP_004211191.1 468890 D 741091 CDS YP_004211192.1 322831165 10211407 469842..471473 1 NC_015061.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: spe:Spro_0440 isovaleryl CoA dehydrogenase; acyl-CoA dehydrogenase 471473 10211407 Rahaq_0436 Rahnella sp. Y9602 acyl-CoA dehydrogenase YP_004211192.1 469842 D 741091 CDS YP_004211193.1 322831166 10211408 complement(471474..471785) 1 NC_015061.1 PFAM: protein of unknown function DUF1471; KEGG: spe:Spro_0443 biofilm stress and motility protein A; hypothetical protein 471785 10211408 Rahaq_0437 Rahnella sp. Y9602 hypothetical protein YP_004211193.1 471474 R 741091 CDS YP_004211194.1 322831167 10211409 complement(471882..473831) 1 NC_015061.1 KEGG: pct:PC1_3437 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 473831 10211409 Rahaq_0438 Rahnella sp. Y9602 methyl-accepting chemotaxis sensory transducer YP_004211194.1 471882 R 741091 CDS YP_004211195.1 322831168 10211410 474111..474860 1 NC_015061.1 PFAM: phospholipase/Carboxylesterase; KEGG: ypi:YpsIP31758_3640 esterase; phospholipase/Carboxylesterase 474860 10211410 Rahaq_0439 Rahnella sp. Y9602 phospholipase/Carboxylesterase YP_004211195.1 474111 D 741091 CDS YP_004211196.1 322831169 10211411 475011..475403 1 NC_015061.1 KEGG: eca:ECA3613 30S ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like; 30S ribosomal protein S6 475403 10211411 Rahaq_0440 Rahnella sp. Y9602 30S ribosomal protein S6 YP_004211196.1 475011 D 741091 CDS YP_004211197.1 322831170 10211412 475409..475726 1 NC_015061.1 KEGG: dda:Dd703_0795 primosomal replication protein N; manually curated; PFAM: single-strand binding protein/Primosomal replication protein n; ssDNA-binding protein 475726 10211412 Rahaq_0441 Rahnella sp. Y9602 ssDNA-binding protein YP_004211197.1 475409 D 741091 CDS YP_004211198.1 322831171 10211413 475731..475958 1 NC_015061.1 KEGG: spe:Spro_0448 30S ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18; 30S ribosomal protein S18 475958 10211413 Rahaq_0442 Rahnella sp. Y9602 30S ribosomal protein S18 YP_004211198.1 475731 D 741091 CDS YP_004211199.1 322831172 10211414 475998..476450 1 NC_015061.1 KEGG: spe:Spro_0449 50S ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9-like; 50S ribosomal protein L9 476450 10211414 Rahaq_0443 Rahnella sp. Y9602 50S ribosomal protein L9 YP_004211199.1 475998 D 741091 CDS YP_004211200.1 322831173 10211415 complement(476538..477248) 1 NC_015061.1 PFAM: Opacity-associated protein A domain protein; KEGG: spe:Spro_0451 opacity-associated protein A; Opacity-associated protein A domain protein 477248 10211415 Rahaq_0444 Rahnella sp. Y9602 Opacity-associated protein A domain protein YP_004211200.1 476538 R 741091 CDS YP_004211201.1 322831174 10211416 477504..478124 1 NC_015061.1 PFAM: peptidylprolyl isomerase FKBP-type; FKBP-type peptidyl-prolyl isomerase domain protein; KEGG: pct:PC1_3428 peptidyl-prolyl cis-trans isomerase; FKBP-type peptidylprolyl isomerase 478124 10211416 Rahaq_0445 Rahnella sp. Y9602 FKBP-type peptidylprolyl isomerase YP_004211201.1 477504 D 741091 CDS YP_004211202.1 322831175 10211417 complement(478190..478855) 1 NC_015061.1 KEGG: ypy:YPK_3777 iron-sulfur cluster repair di-iron protein; TIGRFAM: iron-sulfur cluster repair di-iron protein; PFAM: protein of unknown function DUF542 ScdA domain protein; Hemerythrin HHE cation binding domain protein; iron-sulfur cluster repair di-iron protein 478855 10211417 Rahaq_0446 Rahnella sp. Y9602 iron-sulfur cluster repair di-iron protein YP_004211202.1 478190 R 741091 CDS YP_004211203.1 322831176 10211418 complement(478979..480928) 1 NC_015061.1 KEGG: spe:Spro_0453 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; TIGRFAM: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; PFAM: 5'-Nucleotidase domain-containing protein; metallophosphoesterase; 2',3'-cyclic-nucleotide 2'-phosphodiesterase 480928 10211418 Rahaq_0447 Rahnella sp. Y9602 2',3'-cyclic-nucleotide 2'-phosphodiesterase YP_004211203.1 478979 R 741091 CDS YP_004211204.1 322831177 10211419 481127..481873 1 NC_015061.1 KEGG: dze:Dd1591_0784 adenosine-3'(2'),5'-bisphosphate nucleotidase; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; 3'(2'),5'-bisphosphate nucleotidase 481873 10211419 Rahaq_0448 Rahnella sp. Y9602 3'(2'),5'-bisphosphate nucleotidase YP_004211204.1 481127 D 741091 CDS YP_004211205.1 322831178 10211420 complement(481909..482466) 1 NC_015061.1 PFAM: Conserved hypothetical protein, YtfJ; KEGG: spe:Spro_0455 hypothetical protein; hypothetical protein 482466 10211420 Rahaq_0449 Rahnella sp. Y9602 hypothetical protein YP_004211205.1 481909 R 741091 CDS YP_004211206.1 322831179 10211421 482776..482982 1 NC_015061.1 PFAM: protein of unknown function DUF1107; KEGG: spe:Spro_0456 hypothetical protein; hypothetical protein 482982 10211421 Rahaq_0450 Rahnella sp. Y9602 hypothetical protein YP_004211206.1 482776 D 741091 CDS YP_004211207.1 322831180 10211422 complement(483096..484445) 1 NC_015061.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: yen:YE0403 hypothetical protein; hypothetical protein 484445 10211422 Rahaq_0451 Rahnella sp. Y9602 hypothetical protein YP_004211207.1 483096 R 741091 CDS YP_004211208.1 322831181 10211423 complement(484673..485311) 1 NC_015061.1 TIGRFAM: peptide methionine sulfoxide reductase; KEGG: spe:Spro_0458 methionine sulfoxide reductase A; PFAM: methionine sulfoxide reductase A; peptide methionine sulfoxide reductase 485311 10211423 Rahaq_0452 Rahnella sp. Y9602 peptide methionine sulfoxide reductase YP_004211208.1 484673 R 741091 CDS YP_004211209.1 322831182 10211424 485581..487317 1 NC_015061.1 PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; KEGG: spe:Spro_0459 surface antigen (D15); surface antigen (D15) 487317 10211424 Rahaq_0453 Rahnella sp. Y9602 surface antigen (D15) YP_004211209.1 485581 D 741091 CDS YP_004211210.1 322831183 10211425 487314..491129 1 NC_015061.1 PFAM: protein of unknown function DUF490; KEGG: spe:Spro_0460 hypothetical protein; hypothetical protein 491129 10211425 Rahaq_0454 Rahnella sp. Y9602 hypothetical protein YP_004211210.1 487314 D 741091 CDS YP_004211211.1 322831184 10211426 491161..491514 1 NC_015061.1 PFAM: AIG2 family protein; KEGG: etr:ETAE_0379 hypothetical protein; AIG2 family protein 491514 10211426 Rahaq_0455 Rahnella sp. Y9602 AIG2 family protein YP_004211211.1 491161 D 741091 CDS YP_004211212.1 322831185 10211427 complement(491616..492146) 1 NC_015061.1 KEGG: etr:ETAE_0380 inorganic pyrophosphatase; PFAM: inorganic pyrophosphatase; inorganic diphosphatase 492146 10211427 Rahaq_0456 Rahnella sp. Y9602 inorganic diphosphatase YP_004211212.1 491616 R 741091 CDS YP_004211213.1 322831186 10211428 complement(492301..492420) 1 NC_015061.1 hypothetical protein 492420 10211428 Rahaq_0457 Rahnella sp. Y9602 hypothetical protein YP_004211213.1 492301 R 741091 CDS YP_004211214.1 322831187 10211429 492463..494034 1 NC_015061.1 KEGG: spe:Spro_0463 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 494034 10211429 Rahaq_0458 Rahnella sp. Y9602 methyl-accepting chemotaxis sensory transducer YP_004211214.1 492463 D 741091 CDS YP_004211215.1 322831188 10211430 complement(494158..495162) 1 NC_015061.1 KEGG: pay:PAU_04051 fructose-1,6-bisphosphatase (d-fructose-1,6-bisphosphate 1 phosphohydrolase) (fbpase); PFAM: Inositol phosphatase/fructose-16-bisphosphatase; fructose-bisphosphatase 495162 10211430 Rahaq_0459 Rahnella sp. Y9602 fructose-bisphosphatase YP_004211215.1 494158 R 741091 CDS YP_004211216.1 322831189 10211431 495330..496715 1 NC_015061.1 KEGG: spe:Spro_0465 UDP-N-acetylmuramate; TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; UDP-N-acetylmuramate--L-alanine ligase 496715 10211431 Rahaq_0460 Rahnella sp. Y9602 UDP-N-acetylmuramate--L-alanine ligase YP_004211216.1 495330 D 741091 CDS YP_004211217.1 322831190 10211432 complement(497014..497286) 1 NC_015061.1 PFAM: protein of unknown function DUF1471; KEGG: pam:PANA_3550 YhcN; hypothetical protein 497286 10211432 Rahaq_0461 Rahnella sp. Y9602 hypothetical protein YP_004211217.1 497014 R 741091 CDS YP_004211218.1 322831191 10211433 complement(497357..497458) 1 NC_015061.1 hypothetical protein 497458 10211433 Rahaq_0462 Rahnella sp. Y9602 hypothetical protein YP_004211218.1 497357 R 741091 CDS YP_004211219.1 322831192 10211434 complement(497488..497751) 1 NC_015061.1 PFAM: protein of unknown function DUF1471; KEGG: yen:YE0412 hypothetical protein; hypothetical protein 497751 10211434 Rahaq_0463 Rahnella sp. Y9602 hypothetical protein YP_004211219.1 497488 R 741091 CDS YP_004211220.1 322831193 10211435 complement(498202..498672) 1 NC_015061.1 KEGG: ypb:YPTS_0489 arginine repressor; TIGRFAM: arginine repressor; PFAM: Arginine repressor-like; arginine repressor ArgR 498672 10211435 Rahaq_0464 Rahnella sp. Y9602 arginine repressor ArgR YP_004211220.1 498202 R 741091 CDS YP_004211221.1 322831194 10211436 499137..500075 1 NC_015061.1 KEGG: ypb:YPTS_0490 malate dehydrogenase; TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: Lactate/malate dehydrogenase; malate dehydrogenase 500075 10211436 Rahaq_0465 Rahnella sp. Y9602 malate dehydrogenase YP_004211221.1 499137 D 741091 CDS YP_004211222.1 322831195 10211437 complement(500119..500391) 1 NC_015061.1 KEGG: ddc:Dd586_0582 transcriptional regulator, Nlp; Nlp family transcriptional regulator 500391 10211437 Rahaq_0466 Rahnella sp. Y9602 Nlp family transcriptional regulator YP_004211222.1 500119 R 741091 CDS YP_004211223.1 322831196 10211438 501052..501411 1 NC_015061.1 PFAM: MuA-transposase/repressor protein CI DNA-binding; KEGG: ypb:YPTS_0492 MuA-transposase/repressor protein CI DNA-binding; MuA-transposase/repressor protein CI DNA-binding protein 501411 10211438 Rahaq_0467 Rahnella sp. Y9602 MuA-transposase/repressor protein CI DNA-binding protein YP_004211223.1 501052 D 741091 CDS YP_004211224.1 322831197 10211439 complement(501465..502436) 1 NC_015061.1 KEGG: pwa:Pecwa_0792 octaprenyl diphosphate synthase; manually curated; PFAM: Polyprenyl synthetase; polyprenyl synthetase 502436 10211439 Rahaq_0468 Rahnella sp. Y9602 polyprenyl synthetase YP_004211224.1 501465 R 741091 CDS YP_004211225.1 322831198 10211440 502696..503007 1 NC_015061.1 KEGG: yen:YE0418 50S ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; 50S ribosomal protein L21 503007 10211440 Rahaq_0469 Rahnella sp. Y9602 50S ribosomal protein L21 YP_004211225.1 502696 D 741091 CDS YP_004211226.1 322831199 10211441 503026..503283 1 NC_015061.1 KEGG: ypb:YPTS_0495 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; 50S ribosomal protein L27 503283 10211441 Rahaq_0470 Rahnella sp. Y9602 50S ribosomal protein L27 YP_004211226.1 503026 D 741091 CDS YP_004211227.1 322831200 10211442 503369..504325 1 NC_015061.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ypb:YPTS_0496 hypothetical protein; hypothetical protein 504325 10211442 Rahaq_0471 Rahnella sp. Y9602 hypothetical protein YP_004211227.1 503369 D 741091 CDS YP_004211228.1 322831201 10211443 504359..505531 1 NC_015061.1 KEGG: spe:Spro_0476 GTPase ObgE; TIGRFAM: GTP-binding protein Obg/CgtA; small GTP-binding protein; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; GTP-binding protein Obg/CgtA 505531 10211443 Rahaq_0472 Rahnella sp. Y9602 GTP-binding protein Obg/CgtA YP_004211228.1 504359 D 741091 CDS YP_004211229.1 322831202 10211444 505660..506982 1 NC_015061.1 PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein; transposase IS4 family protein 506982 10211444 Rahaq_0473 Rahnella sp. Y9602 transposase IS4 family protein YP_004211229.1 505660 D 741091 CDS YP_004211230.1 322831203 10211445 complement(507041..508132) 1 NC_015061.1 KEGG: spe:Spro_0477 sensor protein BasS/PmrB; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 508132 10211445 Rahaq_0474 Rahnella sp. Y9602 integral membrane sensor signal transduction histidine kinase YP_004211230.1 507041 R 741091 CDS YP_004211231.1 322831204 10211446 complement(508129..508791) 1 NC_015061.1 KEGG: spe:Spro_0478 DNA-binding transcriptional regulator BasR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator 508791 10211446 Rahaq_0475 Rahnella sp. Y9602 transcriptional regulator YP_004211231.1 508129 R 741091 CDS YP_004211232.1 322831205 10211447 complement(508812..510245) 1 NC_015061.1 TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; KEGG: spe:Spro_0479 D-alanyl-D-alanine carboxypeptidase/endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 510245 10211447 Rahaq_0476 Rahnella sp. Y9602 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase YP_004211232.1 508812 R 741091 CDS YP_004211233.1 322831206 10211448 510527..511003 1 NC_015061.1 KEGG: pct:PC1_0563 transcription elongation factor GreA; TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain-containing protein; transcription elongation factor GreA 511003 10211448 Rahaq_0477 Rahnella sp. Y9602 transcription elongation factor GreA YP_004211233.1 510527 D 741091 CDS YP_004211234.1 322831207 10211449 complement(511184..511480) 1 NC_015061.1 PFAM: protein of unknown function UPF0044; KEGG: spe:Spro_0481 hypothetical protein; hypothetical protein 511480 10211449 Rahaq_0478 Rahnella sp. Y9602 hypothetical protein YP_004211234.1 511184 R 741091 CDS YP_004211235.1 322831208 10211450 511663..512292 1 NC_015061.1 KEGG: yen:YE0427 23S rRNA methyltransferase J; TIGRFAM: ribosomal RNA large subunit methyltransferase J; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; ribosomal RNA large subunit methyltransferase J 512292 10211450 Rahaq_0479 Rahnella sp. Y9602 ribosomal RNA large subunit methyltransferase J YP_004211235.1 511663 D 741091 CDS YP_004211236.1 322831209 10211451 512340..514292 1 NC_015061.1 SMART: AAA ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: spe:Spro_0483 ATP-dependent metalloprotease; PFAM: peptidase M41; AAA ATPase; ATP-dependent metalloprotease FtsH 514292 10211451 Rahaq_0480 Rahnella sp. Y9602 ATP-dependent metalloprotease FtsH YP_004211236.1 512340 D 741091 CDS YP_004211237.1 322831210 10211452 514417..515256 1 NC_015061.1 TIGRFAM: dihydropteroate synthase; KEGG: yen:YE0429 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase 515256 10211452 Rahaq_0481 Rahnella sp. Y9602 dihydropteroate synthase YP_004211237.1 514417 D 741091 CDS YP_004211238.1 322831211 10211453 515259..516599 1 NC_015061.1 KEGG: pwa:Pecwa_0803 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucosamine mutase 516599 10211453 Rahaq_0482 Rahnella sp. Y9602 phosphoglucosamine mutase YP_004211238.1 515259 D 741091 CDS YP_004211239.1 322831212 10211454 516835..517170 1 NC_015061.1 KEGG: yen:YE0431 preprotein translocase subunit SecG; TIGRFAM: preprotein translocase SecG subunit; PFAM: Preprotein translocase SecG subunit; preprotein translocase subunit SecG 517170 10211454 Rahaq_0483 Rahnella sp. Y9602 preprotein translocase subunit SecG YP_004211239.1 516835 D 741091 CDS YP_004211240.1 322831213 10211458 518170..519678 1 NC_015061.1 KEGG: spe:Spro_0488 transcription elongation factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: NusA domain-containing protein; RNA binding S1 domain protein; NusA antitermination factor 519678 10211458 Rahaq_0485 Rahnella sp. Y9602 NusA antitermination factor YP_004211240.1 518170 D 741091 CDS YP_004211241.1 322831214 10211459 519703..522396 1 NC_015061.1 KEGG: ypb:YPTS_0510 translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; Initiation factor 2 associated domain protein ; translation initiation factor IF-2 domain-containing protein; elongation factor Tu domain 2 protein; translation initiation factor IF-2 522396 10211459 Rahaq_0486 Rahnella sp. Y9602 translation initiation factor IF-2 YP_004211241.1 519703 D 741091 CDS YP_004211242.1 322831215 10211460 522476..522889 1 NC_015061.1 KEGG: spe:Spro_0490 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A; ribosome-binding factor A 522889 10211460 Rahaq_0487 Rahnella sp. Y9602 ribosome-binding factor A YP_004211242.1 522476 D 741091 CDS YP_004211243.1 322831216 10211461 522889..523833 1 NC_015061.1 KEGG: spe:Spro_0491 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B; tRNA pseudouridine synthase B 523833 10211461 Rahaq_0488 Rahnella sp. Y9602 tRNA pseudouridine synthase B YP_004211243.1 522889 D 741091 CDS YP_004211244.1 322831217 10211462 523956..524225 1 NC_015061.1 KEGG: cko:CKO_04564 30S ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15; 30S ribosomal protein S15 524225 10211462 Rahaq_0489 Rahnella sp. Y9602 30S ribosomal protein S15 YP_004211244.1 523956 D 741091 CDS YP_004211245.1 322831218 10211463 524655..526778 1 NC_015061.1 SMART: KH domain protein; TIGRFAM: polyribonucleotide nucleotidyltransferase; KEGG: spe:Spro_0493 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding; K Homology, type 1, subgroup; RNA binding S1 domain protein; polyribonucleotide nucleotidyltransferase 526778 10211463 Rahaq_0490 Rahnella sp. Y9602 polyribonucleotide nucleotidyltransferase YP_004211245.1 524655 D 741091 CDS YP_004211246.1 322831219 10211464 526908..527792 1 NC_015061.1 KEGG: spe:Spro_0494 lipoprotein NlpI; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; hypothetical protein 527792 10211464 Rahaq_0491 Rahnella sp. Y9602 hypothetical protein YP_004211246.1 526908 D 741091 CDS YP_004211247.1 322831220 10211465 527977..529899 1 NC_015061.1 KEGG: spe:Spro_0495 ATP-dependent RNA helicase DeaD; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase 529899 10211465 Rahaq_0492 Rahnella sp. Y9602 DEAD/DEAH box helicase YP_004211247.1 527977 D 741091 CDS YP_004211248.1 322831221 10211466 complement(529986..531011) 1 NC_015061.1 KEGG: spe:Spro_0498 hypothetical protein; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: luciferase; luciferase family oxidoreductase 531011 10211466 Rahaq_0493 Rahnella sp. Y9602 luciferase family oxidoreductase YP_004211248.1 529986 R 741091 CDS YP_004211249.1 322831222 10211467 531229..532203 1 NC_015061.1 PFAM: secretion protein HlyD family protein; KEGG: spe:Spro_0499 secretion protein HlyD family protein; secretion protein HlyD family protein 532203 10211467 Rahaq_0494 Rahnella sp. Y9602 secretion protein HlyD family protein YP_004211249.1 531229 D 741091 CDS YP_004211250.1 322831223 10211468 532200..533372 1 NC_015061.1 PFAM: ABC transporter; KEGG: spe:Spro_0500 ABC transporter; ABC transporter 533372 10211468 Rahaq_0495 Rahnella sp. Y9602 ABC transporter YP_004211250.1 532200 D 741091 CDS YP_004211251.1 322831224 10211469 533369..534532 1 NC_015061.1 PFAM: ABC transporter; KEGG: spe:Spro_0501 ABC transporter; ABC transporter 534532 10211469 Rahaq_0496 Rahnella sp. Y9602 ABC transporter YP_004211251.1 533369 D 741091 CDS YP_004211252.1 322831225 10211470 complement(534585..535463) 1 NC_015061.1 PFAM: peptidase U32; KEGG: yen:YE0449 hypothetical protein; peptidase U32 535463 10211470 Rahaq_0497 Rahnella sp. Y9602 peptidase U32 YP_004211252.1 534585 R 741091 CDS YP_004211253.1 322831226 10211471 complement(535478..536473) 1 NC_015061.1 PFAM: peptidase U32; KEGG: cko:CKO_04553 hypothetical protein; peptidase U32 536473 10211471 Rahaq_0498 Rahnella sp. Y9602 peptidase U32 YP_004211253.1 535478 R 741091 CDS YP_004211254.1 322831227 10211472 536789..537310 1 NC_015061.1 PFAM: Sterol-binding domain protein; KEGG: spe:Spro_0505 sterol-binding domain-containing protein; Sterol-binding domain-containing protein 537310 10211472 Rahaq_0499 Rahnella sp. Y9602 Sterol-binding domain-containing protein YP_004211254.1 536789 D 741091 CDS YP_004211255.1 322831228 10211473 537304..537807 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE0452 acetyltransferase; N-acetyltransferase GCN5 537807 10211473 Rahaq_0500 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004211255.1 537304 D 741091 CDS YP_004211256.1 322831229 10211474 complement(537848..538150) 1 NC_015061.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: yen:YE0453 GIY-YIG nuclease superfamily protein; Excinuclease ABC C subunit domain-containing protein 538150 10211474 Rahaq_0501 Rahnella sp. Y9602 Excinuclease ABC C subunit domain-containing protein YP_004211256.1 537848 R 741091 CDS YP_004211257.1 322831230 10211475 538266..538700 1 NC_015061.1 KEGG: spe:Spro_0510 hypothetical protein; hypothetical protein 538700 10211475 Rahaq_0502 Rahnella sp. Y9602 hypothetical protein YP_004211257.1 538266 D 741091 CDS YP_004211258.1 322831231 10211476 538806..539447 1 NC_015061.1 PFAM: Semialdehyde dehydrogenase NAD - binding; KEGG: spe:Spro_0511 hypothetical protein; semialdehyde dehydrogenase NAD-binding protein 539447 10211476 Rahaq_0503 Rahnella sp. Y9602 semialdehyde dehydrogenase NAD-binding protein YP_004211258.1 538806 D 741091 CDS YP_004211259.1 322831232 10211477 complement(539546..540184) 1 NC_015061.1 TIGRFAM: phosphonate metabolim protein, transferase hexapeptide repeat family; KEGG: spe:Spro_0513 acetyltransferase (virginiamycin, streptogramin A, chloramphenicol); phosphonate metabolism protein 540184 10211477 Rahaq_0504 Rahnella sp. Y9602 phosphonate metabolism protein YP_004211259.1 539546 R 741091 CDS YP_004211260.1 322831233 10211478 complement(540193..540768) 1 NC_015061.1 KEGG: ebi:EbC_27490 ribose 1,5-bisphosphokinase; TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region; phosphonate metabolism protein/1,5-bisphosphokinase PhnN 540768 10211478 Rahaq_0505 Rahnella sp. Y9602 phosphonate metabolism protein/1,5-bisphosphokinase PhnN YP_004211260.1 540193 R 741091 CDS YP_004211261.1 322831234 10211479 complement(540844..541980) 1 NC_015061.1 KEGG: spe:Spro_0515 phosphonate metabolism protein PhnM; TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase; phosphonate metabolism protein PhnM 541980 10211479 Rahaq_0506 Rahnella sp. Y9602 phosphonate metabolism protein PhnM YP_004211261.1 540844 R 741091 CDS YP_004211262.1 322831235 10211480 complement(541977..542684) 1 NC_015061.1 TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; KEGG: spe:Spro_0516 phosphonate C-P lyase system protein PhnL; SMART: AAA ATPase; phosphonate C-P lyase system protein PhnL 542684 10211480 Rahaq_0507 Rahnella sp. Y9602 phosphonate C-P lyase system protein PhnL YP_004211262.1 541977 R 741091 CDS YP_004211263.1 322831236 10211481 complement(542713..543504) 1 NC_015061.1 TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: spe:Spro_0517 phosphonate C-P lyase system protein PhnK; SMART: AAA ATPase; phosphonate C-P lyase system protein PhnK 543504 10211481 Rahaq_0508 Rahnella sp. Y9602 phosphonate C-P lyase system protein PhnK YP_004211263.1 542713 R 741091 CDS YP_004211264.1 322831237 10211482 complement(543504..544379) 1 NC_015061.1 PFAM: phosphonate metabolism PhnJ; KEGG: pam:PANA_2395 PhnJ; phosphonate metabolism PhnJ 544379 10211482 Rahaq_0509 Rahnella sp. Y9602 phosphonate metabolism PhnJ YP_004211264.1 543504 R 741091 CDS YP_004211265.1 322831238 10211483 complement(544369..545451) 1 NC_015061.1 PFAM: phosphonate metabolism; KEGG: spe:Spro_0519 phosphonate metabolism; phosphonate metabolism protein 545451 10211483 Rahaq_0510 Rahnella sp. Y9602 phosphonate metabolism protein YP_004211265.1 544369 R 741091 CDS YP_004211266.1 322831239 10211484 complement(545451..546032) 1 NC_015061.1 KEGG: pct:PC1_0888 phosphonate C-P lyase system protein PhnH; TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism; phosphonate C-P lyase system protein PhnH 546032 10211484 Rahaq_0511 Rahnella sp. Y9602 phosphonate C-P lyase system protein PhnH YP_004211266.1 545451 R 741091 CDS YP_004211267.1 322831240 10211485 complement(546036..546479) 1 NC_015061.1 KEGG: spe:Spro_0521 phosphonate metabolism PhnG; TIGRFAM: phosphonate C-P lyase system protein PhnG; PFAM: phosphonate metabolism PhnG; phosphonate C-P lyase system protein PhnG 546479 10211485 Rahaq_0512 Rahnella sp. Y9602 phosphonate C-P lyase system protein PhnG YP_004211267.1 546036 R 741091 CDS YP_004211268.1 322831241 10211486 complement(546480..547205) 1 NC_015061.1 TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; KEGG: spe:Spro_0522 phosphonate metabolism transcriptional regulator PhnF; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 547205 10211486 Rahaq_0513 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004211268.1 546480 R 741091 CDS YP_004211269.1 322831242 10211487 547513..547854 1 NC_015061.1 PFAM: protein of unknown function DUF891; KEGG: eum:ECUMN_2400 hypothetical protein; hypothetical protein 547854 10211487 Rahaq_0514 Rahnella sp. Y9602 hypothetical protein YP_004211269.1 547513 D 741091 CDS YP_004211270.1 322831243 10211488 547838..548125 1 NC_015061.1 KEGG: eba:ebA101 hypothetical protein; XRE family transcriptional regulator 548125 10211488 Rahaq_0515 Rahnella sp. Y9602 XRE family transcriptional regulator YP_004211270.1 547838 D 741091 CDS YP_004211271.1 322831244 10211489 548246..548407 1 NC_015061.1 KEGG: yen:YE3481 gyrase inhibitor antitoxin; hypothetical protein 548407 10211489 Rahaq_0516 Rahnella sp. Y9602 hypothetical protein YP_004211271.1 548246 D 741091 CDS YP_004211272.1 322831245 10211490 complement(548442..548906) 1 NC_015061.1 KEGG: pct:PC1_0359 anaerobic ribonucleotide reductase-activating protein; manually curated; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; anaerobic ribonucleoside-triphosphate reductase activating protein 548906 10211490 Rahaq_0517 Rahnella sp. Y9602 anaerobic ribonucleoside-triphosphate reductase activating protein YP_004211272.1 548442 R 741091 CDS YP_004211273.1 322831246 10211491 complement(548911..551094) 1 NC_015061.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; KEGG: spe:Spro_0525 anaerobic ribonucleoside triphosphate reductase; PFAM: formate C-acetyltransferase glycine radical; ATP-cone domain protein; anaerobic ribonucleoside-triphosphate reductase 551094 10211491 Rahaq_0518 Rahnella sp. Y9602 anaerobic ribonucleoside-triphosphate reductase YP_004211273.1 548911 R 741091 CDS YP_004211274.1 322831247 10211492 complement(551393..553036) 1 NC_015061.1 TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase catalytic region; KEGG: spe:Spro_0528 trehalose-6-phosphate hydrolase; SMART: alpha amylase catalytic sub domain; alpha,alpha-phosphotrehalase 553036 10211492 Rahaq_0519 Rahnella sp. Y9602 alpha,alpha-phosphotrehalase YP_004211274.1 551393 R 741091 CDS YP_004211275.1 322831248 10211493 complement(553059..554477) 1 NC_015061.1 TIGRFAM: PTS system, trehalose-specific IIBC subunit; PTS system, glucose-like IIB subunint; KEGG: spe:Spro_0529 PTS system trehalose(maltose)-specific transporter subunits IIBC; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; PTS system trehalose-specific transporter subunit IIBC 554477 10211493 Rahaq_0520 Rahnella sp. Y9602 PTS system trehalose-specific transporter subunit IIBC YP_004211275.1 553059 R 741091 CDS YP_004211276.1 322831249 10211494 complement(554630..555586) 1 NC_015061.1 TIGRFAM: trehalose operon repressor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE3775 trehalose repressor; SMART: regulatory protein LacI; LacI family transcriptional regulator 555586 10211494 Rahaq_0521 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004211276.1 554630 R 741091 CDS YP_004211277.1 322831250 10211495 555934..558633 1 NC_015061.1 TIGRFAM: magnesium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; KEGG: spe:Spro_0535 magnesium-transporting ATPase MgtA; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; magnesium-translocating P-type ATPase 558633 10211495 Rahaq_0522 Rahnella sp. Y9602 magnesium-translocating P-type ATPase YP_004211277.1 555934 D 741091 CDS YP_004211278.1 322831251 10211496 complement(558711..559685) 1 NC_015061.1 PFAM: Integral membrane protein TerC; KEGG: eay:EAM_0499 protein Alx ( high pH-induced membrane-bound redox modulator); integral membrane protein TerC 559685 10211496 Rahaq_0523 Rahnella sp. Y9602 integral membrane protein TerC YP_004211278.1 558711 R 741091 CDS YP_004211279.1 322831252 10211497 complement(559983..560729) 1 NC_015061.1 PFAM: glutamine amidotransferase class-I; KEGG: spe:Spro_4317 glutamine amidotransferase class-I; glutamine amidotransferase 560729 10211497 Rahaq_0524 Rahnella sp. Y9602 glutamine amidotransferase YP_004211279.1 559983 R 741091 CDS YP_004211280.1 322831253 10211498 complement(560756..561742) 1 NC_015061.1 PFAM: oxidoreductase domain protein; KEGG: spe:Spro_4316 oxidoreductase domain-containing protein; oxidoreductase domain-containing protein 561742 10211498 Rahaq_0525 Rahnella sp. Y9602 oxidoreductase domain-containing protein YP_004211280.1 560756 R 741091 CDS YP_004211281.1 322831254 10211499 complement(561765..562271) 1 NC_015061.1 PFAM: protein of unknown function DUF45; KEGG: yen:YE3701 hypothetical protein; hypothetical protein 562271 10211499 Rahaq_0526 Rahnella sp. Y9602 hypothetical protein YP_004211281.1 561765 R 741091 CDS YP_004211282.1 322831255 10211500 562442..563593 1 NC_015061.1 KEGG: spe:Spro_4312 rRNA (guanine-N(2)-)-methyltransferase; PFAM: methyltransferase small; rRNA (guanine-N(2)-)-methyltransferase 563593 10211500 Rahaq_0527 Rahnella sp. Y9602 rRNA (guanine-N(2)-)-methyltransferase YP_004211282.1 562442 D 741091 CDS YP_004211283.1 322831256 10211501 complement(563677..565713) 1 NC_015061.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ypi:YpsIP31758_0501 2,4-dienoyl-coa reductase; NADH:flavin oxidoreductase 565713 10211501 Rahaq_0528 Rahnella sp. Y9602 NADH:flavin oxidoreductase YP_004211283.1 563677 R 741091 CDS YP_004211284.1 322831257 10211502 566110..566976 1 NC_015061.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: spe:Spro_4743 enoyl-CoA hydratase; Enoyl-CoA hydratase/isomerase 566976 10211502 Rahaq_0529 Rahnella sp. Y9602 Enoyl-CoA hydratase/isomerase YP_004211284.1 566110 D 741091 CDS YP_004211285.1 322831258 10211503 complement(567006..569024) 1 NC_015061.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; KEGG: yen:YE0053 RNase II stability modulator; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 569024 10211503 Rahaq_0530 Rahnella sp. Y9602 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_004211285.1 567006 R 741091 CDS YP_004211286.1 322831259 10211504 complement(569307..571604) 1 NC_015061.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: spe:Spro_1371 glycoside hydrolase family 3 protein; glycoside hydrolase 571604 10211504 Rahaq_0531 Rahnella sp. Y9602 glycoside hydrolase YP_004211286.1 569307 R 741091 CDS YP_004211287.1 322831260 10211505 complement(571984..572268) 1 NC_015061.1 KEGG: spe:Spro_2355 hypothetical protein; hypothetical protein 572268 10211505 Rahaq_0532 Rahnella sp. Y9602 hypothetical protein YP_004211287.1 571984 R 741091 CDS YP_004211288.1 322831261 10211506 complement(572521..575247) 1 NC_015061.1 KEGG: ebi:EbC_44730 transcriptional regulator MalT; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; LuxR family transcriptional regulator 575247 10211506 Rahaq_0533 Rahnella sp. Y9602 LuxR family transcriptional regulator YP_004211288.1 572521 R 741091 CDS YP_004211289.1 322831262 10211507 575570..577972 1 NC_015061.1 KEGG: ebi:EbC_44720 maltodextrin phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase 577972 10211507 Rahaq_0534 Rahnella sp. Y9602 glycogen/starch/alpha-glucan phosphorylase YP_004211289.1 575570 D 741091 CDS YP_004211290.1 322831263 10211508 577982..580072 1 NC_015061.1 TIGRFAM: 4-alpha-glucanotransferase; KEGG: ebi:EbC_44710 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77; 4-alpha-glucanotransferase 580072 10211508 Rahaq_0535 Rahnella sp. Y9602 4-alpha-glucanotransferase YP_004211290.1 577982 D 741091 CDS YP_004211291.1 322831264 10211509 580194..581198 1 NC_015061.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ddd:Dda3937_00500 ISEch4 transposase; transposase IS116/IS110/IS902 family protein 581198 10211509 Rahaq_0536 Rahnella sp. Y9602 transposase IS116/IS110/IS902 family protein YP_004211291.1 580194 D 741091 CDS YP_004211292.1 322831265 10211510 complement(581694..582584) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_44700 maltose transport system permease protein; binding-protein-dependent transport system inner membrane protein 582584 10211510 Rahaq_0537 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004211292.1 581694 R 741091 CDS YP_004211293.1 322831266 10211511 complement(582598..584142) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_44690 maltose/maltodextrin ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 584142 10211511 Rahaq_0538 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004211293.1 582598 R 741091 CDS YP_004211294.1 322831267 10211512 complement(584214..585413) 1 NC_015061.1 PFAM: extracellular solute-binding protein family 1; KEGG: ebi:EbC_44680 maltose/maltodextrin-binding periplasmic protein; extracellular solute-binding protein 585413 10211512 Rahaq_0539 Rahnella sp. Y9602 extracellular solute-binding protein YP_004211294.1 584214 R 741091 CDS YP_004211295.1 322831268 10211513 585780..586889 1 NC_015061.1 KEGG: spe:Spro_4470 maltose/maltodextrin transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter 586889 10211513 Rahaq_0540 Rahnella sp. Y9602 ABC transporter YP_004211295.1 585780 D 741091 CDS YP_004211296.1 322831269 10211514 586919..588214 1 NC_015061.1 PFAM: porin LamB type; KEGG: ebi:EbC_44660 maltoporin; porin 588214 10211514 Rahaq_0541 Rahnella sp. Y9602 porin YP_004211296.1 586919 D 741091 CDS YP_004211297.1 322831270 10211515 588445..589341 1 NC_015061.1 PFAM: Maltose operon periplasmic; KEGG: ebi:EbC_44650 maltose operon periplasmic protein; maltose operon periplasmic 589341 10211515 Rahaq_0542 Rahnella sp. Y9602 maltose operon periplasmic YP_004211297.1 588445 D 741091 CDS YP_004211298.1 322831271 10211516 589579..590418 1 NC_015061.1 KEGG: pfs:PFLU2718 AraC-family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 590418 10211516 Rahaq_0543 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004211298.1 589579 D 741091 CDS YP_004211299.1 322831272 10211517 590470..590907 1 NC_015061.1 PFAM: Protein of unknown function DUF2000; KEGG: ebi:EbC_15810 conserved uncharacterized protein; hypothetical protein 590907 10211517 Rahaq_0544 Rahnella sp. Y9602 hypothetical protein YP_004211299.1 590470 D 741091 CDS YP_004211300.1 322831273 10211518 590978..591676 1 NC_015061.1 KEGG: mlo:mll2704 acid phosphatase; acid phosphatase 591676 10211518 Rahaq_0545 Rahnella sp. Y9602 acid phosphatase YP_004211300.1 590978 D 741091 CDS YP_004211301.1 322831274 10211519 591740..592225 1 NC_015061.1 KEGG: pfl:PFL_5108 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylguanine DNA methyltransferase ribonuclease domain protein; methylated-DNA--protein-cysteine methyltransferase 592225 10211519 Rahaq_0546 Rahnella sp. Y9602 methylated-DNA--protein-cysteine methyltransferase YP_004211301.1 591740 D 741091 CDS YP_004211302.1 322831275 10211520 592338..593681 1 NC_015061.1 KEGG: set:SEN1744 glutamate dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; glutamate dehydrogenase 593681 10211520 Rahaq_0547 Rahnella sp. Y9602 glutamate dehydrogenase YP_004211302.1 592338 D 741091 CDS YP_004211303.1 322831276 10211521 complement(593751..596045) 1 NC_015061.1 KEGG: spe:Spro_3430 outer membrane receptor FepA; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; TonB-dependent siderophore receptor 596045 10211521 Rahaq_0548 Rahnella sp. Y9602 TonB-dependent siderophore receptor YP_004211303.1 593751 R 741091 CDS YP_004211304.1 322831277 10211522 596247..597590 1 NC_015061.1 PFAM: esterase; KEGG: spe:Spro_3429 enterobactin/ferric enterobactin esterase; esterase 597590 10211522 Rahaq_0549 Rahnella sp. Y9602 esterase YP_004211304.1 596247 D 741091 CDS YP_004211305.1 322831278 10211523 complement(597564..598361) 1 NC_015061.1 KEGG: spe:Spro_3426 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 598361 10211523 Rahaq_0550 Rahnella sp. Y9602 ABC transporter YP_004211305.1 597564 R 741091 CDS YP_004211306.1 322831279 10211524 complement(598358..599386) 1 NC_015061.1 PFAM: transport system permease protein; KEGG: spe:Spro_3425 iron-enterobactin transporter permease; transport system permease 599386 10211524 Rahaq_0551 Rahnella sp. Y9602 transport system permease YP_004211306.1 598358 R 741091 CDS YP_004211307.1 322831280 10211525 complement(599389..600390) 1 NC_015061.1 PFAM: transport system permease protein; KEGG: spe:Spro_3424 iron-enterobactin transporter membrane protein; transport system permease 600390 10211525 Rahaq_0552 Rahnella sp. Y9602 transport system permease YP_004211307.1 599389 R 741091 CDS YP_004211308.1 322831281 10211526 complement(600390..601358) 1 NC_015061.1 PFAM: periplasmic binding protein; KEGG: spe:Spro_3422 iron-enterobactin transporter periplasmic binding protein; periplasmic binding protein 601358 10211526 Rahaq_0553 Rahnella sp. Y9602 periplasmic binding protein YP_004211308.1 600390 R 741091 CDS YP_004211309.1 322831282 10211528 complement(603538..604302) 1 NC_015061.1 PFAM: integrase family protein; KEGG: ent:Ent638_3514 phage integrase family protein; integrase family protein 604302 10211528 Rahaq_0555 Rahnella sp. Y9602 integrase family protein YP_004211309.1 603538 R 741091 CDS YP_004211310.1 322831283 10211529 604749..605114 1 NC_015061.1 KEGG: aci:ACIAD0051 hypothetical protein; hypothetical protein 605114 10211529 Rahaq_0556 Rahnella sp. Y9602 hypothetical protein YP_004211310.1 604749 D 741091 CDS YP_004211311.1 322831284 10211530 605160..605714 1 NC_015061.1 manually curated; KEGG: reu:Reut_A0552 hypothetical protein; hypothetical protein 605714 10211530 Rahaq_0557 Rahnella sp. Y9602 hypothetical protein YP_004211311.1 605160 D 741091 CDS YP_004211312.1 322831285 10211531 605717..606358 1 NC_015061.1 KEGG: reu:Reut_A0551 hypothetical protein; hypothetical protein 606358 10211531 Rahaq_0558 Rahnella sp. Y9602 hypothetical protein YP_004211312.1 605717 D 741091 CDS YP_004211313.1 322831286 10211532 606355..606684 1 NC_015061.1 KEGG: rso:RSc2281 hypothetical protein; hypothetical protein 606684 10211532 Rahaq_0559 Rahnella sp. Y9602 hypothetical protein YP_004211313.1 606355 D 741091 CDS YP_004211314.1 322831287 10211533 607265..607429 1 NC_015061.1 KEGG: bcm:Bcenmc03_5369 hypothetical protein; hypothetical protein 607429 10211533 Rahaq_0560 Rahnella sp. Y9602 hypothetical protein YP_004211314.1 607265 D 741091 CDS YP_004211315.1 322831288 10211534 complement(607561..607890) 1 NC_015061.1 KEGG: eta:ETA_14180 hypothetical protein; hypothetical protein 607890 10211534 Rahaq_0561 Rahnella sp. Y9602 hypothetical protein YP_004211315.1 607561 R 741091 CDS YP_004211316.1 322831289 10211535 complement(608378..609217) 1 NC_015061.1 KEGG: nwi:Nwi_1613 hypothetical protein; hypothetical protein 609217 10211535 Rahaq_0562 Rahnella sp. Y9602 hypothetical protein YP_004211316.1 608378 R 741091 CDS YP_004211317.1 322831290 10211536 complement(609299..610543) 1 NC_015061.1 KEGG: cch:Cag_0033 hypothetical protein; hypothetical protein 610543 10211536 Rahaq_0563 Rahnella sp. Y9602 hypothetical protein YP_004211317.1 609299 R 741091 CDS YP_004211318.1 322831291 10211537 complement(610563..611561) 1 NC_015061.1 PFAM: integrase family protein; KEGG: ent:Ent638_3514 phage integrase family protein; integrase family protein 611561 10211537 Rahaq_0564 Rahnella sp. Y9602 integrase family protein YP_004211318.1 610563 R 741091 CDS YP_004211319.1 322831292 10211538 complement(611561..612151) 1 NC_015061.1 PFAM: CI repressor; KEGG: kpn:KPN_04893 prophage repressor protein CI; CI repressor 612151 10211538 Rahaq_0565 Rahnella sp. Y9602 CI repressor YP_004211319.1 611561 R 741091 CDS YP_004211320.1 322831293 10211539 612283..612543 1 NC_015061.1 KEGG: kpn:KPN_04892 prophage excisionase; prophage excisionase 612543 10211539 Rahaq_0566 Rahnella sp. Y9602 prophage excisionase YP_004211320.1 612283 D 741091 CDS YP_004211321.1 322831294 10211540 612574..613080 1 NC_015061.1 KEGG: yps:YPTB1769 regulatory protein CII bacteriophage 186; regulatory protein CII bacteriophage 186 613080 10211540 Rahaq_0567 Rahnella sp. Y9602 regulatory protein CII bacteriophage 186 YP_004211321.1 612574 D 741091 CDS YP_004211322.1 322831295 10211541 613083..613253 1 NC_015061.1 manually curated; KEGG: ypy:YPK_0886 hypothetical protein; hypothetical protein 613253 10211541 Rahaq_0568 Rahnella sp. Y9602 hypothetical protein YP_004211322.1 613083 D 741091 CDS YP_004211323.1 322831296 10211542 613261..613563 1 NC_015061.1 KEGG: yps:YPTB1768 gpB bacteriophage P2; gpB bacteriophage P2 613563 10211542 Rahaq_0569 Rahnella sp. Y9602 gpB bacteriophage P2 YP_004211323.1 613261 D 741091 CDS YP_004211324.1 322831297 10211543 613631..613909 1 NC_015061.1 KEGG: enc:ECL_04437 hypothetical protein; hypothetical protein 613909 10211543 Rahaq_0570 Rahnella sp. Y9602 hypothetical protein YP_004211324.1 613631 D 741091 CDS YP_004211325.1 322831298 10211544 613909..614250 1 NC_015061.1 KEGG: pct:PC1_3161 hypothetical protein; hypothetical protein 614250 10211544 Rahaq_0571 Rahnella sp. Y9602 hypothetical protein YP_004211325.1 613909 D 741091 CDS YP_004211326.1 322831299 10211545 614243..614467 1 NC_015061.1 TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; KEGG: stt:t3408 hypothetical protein; phage/conjugal plasmid C-4 type zinc finger protein, TraR family 614467 10211545 Rahaq_0572 Rahnella sp. Y9602 phage/conjugal plasmid C-4 type zinc finger protein, TraR family YP_004211326.1 614243 D 741091 CDS YP_004211327.1 322831300 10211546 614547..616790 1 NC_015061.1 PFAM: replication gene A; KEGG: yps:YPTB1766 phage P2 replication protein; replication protein A 616790 10211546 Rahaq_0573 Rahnella sp. Y9602 replication protein A YP_004211327.1 614547 D 741091 CDS YP_004211328.1 322831301 10211547 617040..617135 1 NC_015061.1 hypothetical protein 617135 10211547 Rahaq_0574 Rahnella sp. Y9602 hypothetical protein YP_004211328.1 617040 D 741091 CDS YP_004211329.1 322831302 10211548 617837..618364 1 NC_015061.1 KEGG: plu:plu0863 hypothetical protein; hypothetical protein 618364 10211548 Rahaq_0575 Rahnella sp. Y9602 hypothetical protein YP_004211329.1 617837 D 741091 CDS YP_004211330.1 322831303 10211549 618364..618828 1 NC_015061.1 KEGG: fjo:Fjoh_3614 hypothetical protein; hypothetical protein 618828 10211549 Rahaq_0576 Rahnella sp. Y9602 hypothetical protein YP_004211330.1 618364 D 741091 CDS YP_004211331.1 322831304 10211550 619134..620051 1 NC_015061.1 KEGG: pha:PSHAb0220 stationary phase or STEss regulating sigma factor; stationary phase or STEss regulating sigma factor 620051 10211550 Rahaq_0577 Rahnella sp. Y9602 stationary phase or STEss regulating sigma factor YP_004211331.1 619134 D 741091 CDS YP_004211332.1 322831305 10211551 complement(620281..621312) 1 NC_015061.1 KEGG: yps:YPTB1764 capsid portal protein; TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein; phage portal protein, PBSX family 621312 10211551 Rahaq_0578 Rahnella sp. Y9602 phage portal protein, PBSX family YP_004211332.1 620281 R 741091 CDS YP_004211333.1 322831306 10211552 complement(621314..623104) 1 NC_015061.1 KEGG: ctu:Ctu_32400 terminase, ATPase subunit; terminase, ATPase subunit 623104 10211552 Rahaq_0579 Rahnella sp. Y9602 terminase, ATPase subunit YP_004211333.1 621314 R 741091 CDS YP_004211334.1 322831307 10211553 623225..624076 1 NC_015061.1 PFAM: capsid scaffolding; KEGG: yps:YPTB1858 V protein phage 186; capsid scaffolding 624076 10211553 Rahaq_0580 Rahnella sp. Y9602 capsid scaffolding YP_004211334.1 623225 D 741091 CDS YP_004211335.1 322831308 10211554 624123..625187 1 NC_015061.1 KEGG: yps:YPTB1760 major capsid protein; TIGRFAM: phage major capsid protein, P2 family; PFAM: major capsid protein P2; phage major capsid protein, P2 family 625187 10211554 Rahaq_0581 Rahnella sp. Y9602 phage major capsid protein, P2 family YP_004211335.1 624123 D 741091 CDS YP_004211336.1 322831309 10211555 625201..625857 1 NC_015061.1 PFAM: small terminase subunit; KEGG: pct:PC1_3174 small terminase subunit; small terminase subunit 625857 10211555 Rahaq_0582 Rahnella sp. Y9602 small terminase subunit YP_004211336.1 625201 D 741091 CDS YP_004211337.1 322831310 10211556 625953..626423 1 NC_015061.1 PFAM: head completion protein; KEGG: yps:YPTB1758 phage head completion protein GpL; head completion protein 626423 10211556 Rahaq_0583 Rahnella sp. Y9602 head completion protein YP_004211337.1 625953 D 741091 CDS YP_004211338.1 322831311 10211557 626423..626626 1 NC_015061.1 PFAM: tail X family protein; KEGG: yps:YPTB1757 phage-related tail protein; tail X family protein 626626 10211557 Rahaq_0584 Rahnella sp. Y9602 tail X family protein YP_004211338.1 626423 D 741091 CDS YP_004211339.1 322831312 10211558 626632..626841 1 NC_015061.1 KEGG: spe:Spro_0872 prophage Hp1 family holin; prophage Hp1 family holin 626841 10211558 Rahaq_0585 Rahnella sp. Y9602 prophage Hp1 family holin YP_004211339.1 626632 D 741091 CDS YP_004211340.1 322831313 10211559 626822..627331 1 NC_015061.1 PFAM: glycoside hydrolase family 24; KEGG: yps:YPTB1755 phage lysozyme; glycoside hydrolase 627331 10211559 Rahaq_0586 Rahnella sp. Y9602 glycoside hydrolase YP_004211340.1 626822 D 741091 CDS YP_004211341.1 322831314 10211560 627331..627756 1 NC_015061.1 TIGRFAM: phage lysis regulatory protein, LysB family; KEGG: yps:YPTB1754 Orf27; P2 LysB homolog; control of lysis [Ente; phage lysis regulatory protein, LysB family 627756 10211560 Rahaq_0587 Rahnella sp. Y9602 phage lysis regulatory protein, LysB family YP_004211341.1 627331 D 741091 CDS YP_004211342.1 322831315 10211561 627852..628319 1 NC_015061.1 KEGG: ecv:APECO1_4476 tail protein; tail protein 628319 10211561 Rahaq_0588 Rahnella sp. Y9602 tail protein YP_004211342.1 627852 D 741091 CDS YP_004211343.1 322831316 10211562 628312..628761 1 NC_015061.1 TIGRFAM: phage virion morphogenesis protein; KEGG: ctu:Ctu_32300 tail completion protein S; phage virion morphogenesis protein 628761 10211562 Rahaq_0589 Rahnella sp. Y9602 phage virion morphogenesis protein YP_004211343.1 628312 D 741091 CDS YP_004211344.1 322831317 10211563 628850..629797 1 NC_015061.1 KEGG: bgf:BC1003_1616 hypothetical protein; hypothetical protein 629797 10211563 Rahaq_0590 Rahnella sp. Y9602 hypothetical protein YP_004211344.1 628850 D 741091 CDS YP_004211345.1 322831318 10211564 629880..630524 1 NC_015061.1 TIGRFAM: phage baseplate assembly protein V; KEGG: spe:Spro_0869 phage baseplate assembly protein V; phage baseplate assembly protein V 630524 10211564 Rahaq_0591 Rahnella sp. Y9602 phage baseplate assembly protein V YP_004211345.1 629880 D 741091 CDS YP_004211346.1 322831319 10211565 630535..630666 1 NC_015061.1 KEGG: mxa:MXAN_2295 hypothetical protein; hypothetical protein 630666 10211565 Rahaq_0592 Rahnella sp. Y9602 hypothetical protein YP_004211346.1 630535 D 741091 CDS YP_004211347.1 322831320 10211566 630659..631009 1 NC_015061.1 PFAM: GPW/gp25 family protein; KEGG: yps:YPTB1750 hypothetical protein; GPW/gp25 family protein 631009 10211566 Rahaq_0593 Rahnella sp. Y9602 GPW/gp25 family protein YP_004211347.1 630659 D 741091 CDS YP_004211348.1 322831321 10211567 631013..631921 1 NC_015061.1 PFAM: Baseplate J family protein; KEGG: spe:Spro_0867 baseplate J family protein; baseplate J family protein 631921 10211567 Rahaq_0594 Rahnella sp. Y9602 baseplate J family protein YP_004211348.1 631013 D 741091 CDS YP_004211349.1 322831322 10211568 631914..632441 1 NC_015061.1 TIGRFAM: phage tail protein I; KEGG: ecz:ECS88_2197 tail protein I (GPI); phage tail protein I 632441 10211568 Rahaq_0595 Rahnella sp. Y9602 phage tail protein I YP_004211349.1 631914 D 741091 CDS YP_004211350.1 322831323 10211569 632451..635249 1 NC_015061.1 PFAM: tail fiber repeat 2 protein; KEGG: xbo:XBJ1_1381 e14 prophage; tail fiber protein (modular protein); tail fiber repeat 2 protein 635249 10211569 Rahaq_0596 Rahnella sp. Y9602 tail fiber repeat 2 protein YP_004211350.1 632451 D 741091 CDS YP_004211351.1 322831324 10211570 635259..635714 1 NC_015061.1 PFAM: tail assembly chaperone gp38; KEGG: plu:plu3023 hypothetical protein; tail assembly chaperone gp38 635714 10211570 Rahaq_0597 Rahnella sp. Y9602 tail assembly chaperone gp38 YP_004211351.1 635259 D 741091 CDS YP_004211352.1 322831325 10211571 635844..637013 1 NC_015061.1 KEGG: yps:YPTB1745 tail sheath protein (P2 and 186 bacteriophage); tail sheath protein (P2 and 186 bacteriophage) 637013 10211571 Rahaq_0598 Rahnella sp. Y9602 tail sheath protein (P2 and 186 bacteriophage) YP_004211352.1 635844 D 741091 CDS YP_004211353.1 322831326 10211572 637028..637537 1 NC_015061.1 KEGG: spe:Spro_0862 phage major tail tube protein; TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; phage major tail tube protein 637537 10211572 Rahaq_0599 Rahnella sp. Y9602 phage major tail tube protein YP_004211353.1 637028 D 741091 CDS YP_004211354.1 322831327 10211573 637596..637877 1 NC_015061.1 PFAM: tail E family protein; KEGG: spe:Spro_0861 tail E family protein; tail E family protein 637877 10211573 Rahaq_0600 Rahnella sp. Y9602 tail E family protein YP_004211354.1 637596 D 741091 CDS YP_004211355.1 322831328 10211574 637910..638029 1 NC_015061.1 KEGG: kpn:KPN_04861 prophage tail protein; manually curated; PFAM: P2 GpE family protein; P2 GpE family protein 638029 10211574 Rahaq_0601 Rahnella sp. Y9602 P2 GpE family protein YP_004211355.1 637910 D 741091 CDS YP_004211356.1 322831329 10211575 638022..640496 1 NC_015061.1 KEGG: kpn:KPN_04860 prophage tail length determinator; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region; phage tail tape measure protein, TP901 family 640496 10211575 Rahaq_0602 Rahnella sp. Y9602 phage tail tape measure protein, TP901 family YP_004211356.1 638022 D 741091 CDS YP_004211357.1 322831330 10211576 640509..640979 1 NC_015061.1 PFAM: P2 GpU family protein; KEGG: pct:PC1_3197 P2 GpU family protein; P2 GpU family protein 640979 10211576 Rahaq_0603 Rahnella sp. Y9602 P2 GpU family protein YP_004211357.1 640509 D 741091 CDS YP_004211358.1 322831331 10211577 640976..642139 1 NC_015061.1 KEGG: yps:YPTB1739 D protein bacteriophage 186 and P2; D protein bacteriophage 186 and P2 642139 10211577 Rahaq_0604 Rahnella sp. Y9602 D protein bacteriophage 186 and P2 YP_004211358.1 640976 D 741091 CDS YP_004211359.1 322831332 10211578 complement(642154..642489) 1 NC_015061.1 KEGG: ddc:Dd586_2409 hypothetical protein; hypothetical protein 642489 10211578 Rahaq_0605 Rahnella sp. Y9602 hypothetical protein YP_004211359.1 642154 R 741091 CDS YP_004211360.1 322831333 10211579 642595..642816 1 NC_015061.1 KEGG: ecg:E2348C_2893 predicted DNA-binding transcriptional regulator; manually curated; PFAM: transcriptional activator Ogr/delta; transcriptional activator Ogr/delta 642816 10211579 Rahaq_0606 Rahnella sp. Y9602 transcriptional activator Ogr/delta YP_004211360.1 642595 D 741091 CDS YP_004211361.1 322831334 10211581 643223..643726 1 NC_015061.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: pwa:Pecwa_0782 G/U mismatch-specific DNA glycosylase; uracil-DNA glycosylase 643726 10211581 Rahaq_0607 Rahnella sp. Y9602 uracil-DNA glycosylase YP_004211361.1 643223 D 741091 CDS YP_004211362.1 322831335 10211582 644012..644107 1 NC_015061.1 hypothetical protein 644107 10211582 Rahaq_0608 Rahnella sp. Y9602 hypothetical protein YP_004211362.1 644012 D 741091 CDS YP_004211363.1 322831336 10211583 644239..644496 1 NC_015061.1 KEGG: dda:Dd703_2118 hypothetical protein; hypothetical protein 644496 10211583 Rahaq_0609 Rahnella sp. Y9602 hypothetical protein YP_004211363.1 644239 D 741091 CDS YP_004211364.1 322831337 10211584 644577..645179 1 NC_015061.1 KEGG: pwa:Pecwa_4468 hypothetical protein; hypothetical protein 645179 10211584 Rahaq_0610 Rahnella sp. Y9602 hypothetical protein YP_004211364.1 644577 D 741091 CDS YP_004211365.1 322831338 10211585 645213..645680 1 NC_015061.1 KEGG: cai:Caci_2650 hypothetical protein; hypothetical protein 645680 10211585 Rahaq_0611 Rahnella sp. Y9602 hypothetical protein YP_004211365.1 645213 D 741091 CDS YP_004211366.1 322831339 10211586 complement(645741..647579) 1 NC_015061.1 KEGG: ypb:YPTS_3562 RNA polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 non-essential domain protein; sigma-70 1.1 domain protein; sigma-70 region 1.2; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein; RNA polymerase sigma-70 subunit RpoD 647579 10211586 Rahaq_0612 Rahnella sp. Y9602 RNA polymerase sigma-70 subunit RpoD YP_004211366.1 645741 R 741091 CDS YP_004211367.1 322831340 10211587 complement(647782..649530) 1 NC_015061.1 TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; TOPRIM domain-containing protein; DNA primase, DnaB-helicase binding domain; DNA primase DnaG DnaB-binding; KEGG: spe:Spro_4299 DNA primase; SMART: DNA primase DnaG DnaB-binding; Toprim sub domain-containing protein; DNA primase 649530 10211587 Rahaq_0613 Rahnella sp. Y9602 DNA primase YP_004211367.1 647782 R 741091 CDS YP_004211368.1 322831341 10211588 complement(649666..649881) 1 NC_015061.1 KEGG: pam:PANA_3388 RpsU; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; 30S ribosomal protein S21 649881 10211588 Rahaq_0614 Rahnella sp. Y9602 30S ribosomal protein S21 YP_004211368.1 649666 R 741091 CDS YP_004211369.1 322831342 10211589 650197..651210 1 NC_015061.1 TIGRFAM: metalloendopeptidase, glycoprotease family; KEGG: sdy:SDY_3248 DNA-binding/iron metalloprotein/AP endonuclease; PFAM: peptidase M22 glycoprotease; glycoprotease family metalloendopeptidase 651210 10211589 Rahaq_0615 Rahnella sp. Y9602 glycoprotease family metalloendopeptidase YP_004211369.1 650197 D 741091 CDS YP_004211370.1 322831343 10211590 complement(651394..652023) 1 NC_015061.1 PFAM: protein of unknown function DUF205; KEGG: ypb:YPTS_3558 glycerol-3-phosphate acyltransferase PlsY; hypothetical protein 652023 10211590 Rahaq_0616 Rahnella sp. Y9602 hypothetical protein YP_004211370.1 651394 R 741091 CDS YP_004211371.1 322831344 10211591 652131..652487 1 NC_015061.1 TIGRFAM: dihydroneopterin aldolase; KEGG: yen:YE3679 bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase; PFAM: dihydroneopterin aldolase; dihydroneopterin aldolase 652487 10211591 Rahaq_0617 Rahnella sp. Y9602 dihydroneopterin aldolase YP_004211371.1 652131 D 741091 CDS YP_004211372.1 322831345 10211592 652671..653498 1 NC_015061.1 KEGG: ent:Ent638_3460 undecaprenyl pyrophosphate phosphatase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; undecaprenol kinase 653498 10211592 Rahaq_0618 Rahnella sp. Y9602 undecaprenol kinase YP_004211372.1 652671 D 741091 CDS YP_004211373.1 322831346 10211593 complement(653577..654812) 1 NC_015061.1 PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: yen:YE3677 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase; polynucleotide adenylyltransferase 654812 10211593 Rahaq_0619 Rahnella sp. Y9602 polynucleotide adenylyltransferase YP_004211373.1 653577 R 741091 CDS YP_004211374.1 322831347 10211594 complement(654943..655563) 1 NC_015061.1 SMART: SH3 domain protein; KEGG: spe:Spro_4292 signal transduction protein; SH3 domain-containing protein 655563 10211594 Rahaq_0620 Rahnella sp. Y9602 SH3 domain-containing protein YP_004211374.1 654943 R 741091 CDS YP_004211375.1 322831348 10211595 655844..657151 1 NC_015061.1 PFAM: adenylate cyclase; KEGG: spe:Spro_4291 adenylate cyclase; adenylate cyclase 657151 10211595 Rahaq_0621 Rahnella sp. Y9602 adenylate cyclase YP_004211375.1 655844 D 741091 CDS YP_004211376.1 322831349 10211596 657209..660046 1 NC_015061.1 KEGG: yen:YE3674 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase; PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase; (glutamate--ammonia-ligase) adenylyltransferase 660046 10211596 Rahaq_0622 Rahnella sp. Y9602 (glutamate--ammonia-ligase) adenylyltransferase YP_004211376.1 657209 D 741091 CDS YP_004211377.1 322831350 10211597 660134..661561 1 NC_015061.1 KEGG: spe:Spro_4289 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: PfkB domain protein; cytidylyltransferase; rfaE bifunctional protein 661561 10211597 Rahaq_0623 Rahnella sp. Y9602 rfaE bifunctional protein YP_004211377.1 660134 D 741091 CDS YP_004211378.1 322831351 10211598 661665..662915 1 NC_015061.1 PFAM: amino acid permease-associated region; KEGG: ypm:YP_2970 inner membrane protein YjeH; amino acid permease 662915 10211598 Rahaq_0624 Rahnella sp. Y9602 amino acid permease YP_004211378.1 661665 D 741091 CDS YP_004211379.1 322831352 10211599 complement(662981..663253) 1 NC_015061.1 PFAM: protein of unknown function DUF526; KEGG: spe:Spro_4287 hypothetical protein; hypothetical protein 663253 10211599 Rahaq_0625 Rahnella sp. Y9602 hypothetical protein YP_004211379.1 662981 R 741091 CDS YP_004211380.1 322831353 10211600 663695..664348 1 NC_015061.1 KEGG: dze:Dd1591_3263 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase 664348 10211600 Rahaq_0626 Rahnella sp. Y9602 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_004211380.1 663695 D 741091 CDS YP_004211381.1 322831354 10211601 complement(664345..664596) 1 NC_015061.1 KEGG: tde:TDE0900 ABC transporter ATP-binding protein; ABC transporter ATP-binding protein 664596 10211601 Rahaq_0627 Rahnella sp. Y9602 ABC transporter ATP-binding protein YP_004211381.1 664345 R 741091 CDS YP_004211382.1 322831355 10211602 664598..665386 1 NC_015061.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: ddd:Dda3937_00723 dioxygenase; extradiol ring-cleavage dioxygenase class III protein subunit B 665386 10211602 Rahaq_0628 Rahnella sp. Y9602 extradiol ring-cleavage dioxygenase class III protein subunit B YP_004211382.1 664598 D 741091 CDS YP_004211383.1 322831356 10211603 complement(665439..666599) 1 NC_015061.1 KEGG: spe:Spro_4275 glutathionylspermidine synthase; PFAM: glutathionylspermidine synthase; Trypanothione synthase 666599 10211603 Rahaq_0629 Rahnella sp. Y9602 Trypanothione synthase YP_004211383.1 665439 R 741091 CDS YP_004211384.1 322831357 10211604 complement(666609..667280) 1 NC_015061.1 PFAM: protein of unknown function DUF1190; KEGG: spe:Spro_4274 hypothetical protein; hypothetical protein 667280 10211604 Rahaq_0630 Rahnella sp. Y9602 hypothetical protein YP_004211384.1 666609 R 741091 CDS YP_004211385.1 322831358 10211605 complement(667467..668960) 1 NC_015061.1 KEGG: ecq:ECED1_3701 outer membrane channel protein; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; TolC family type I secretion outer membrane protein 668960 10211605 Rahaq_0631 Rahnella sp. Y9602 TolC family type I secretion outer membrane protein YP_004211385.1 667467 R 741091 CDS YP_004211386.1 322831359 10211606 669191..669823 1 NC_015061.1 KEGG: ypb:YPTS_3540 ADP-ribose pyrophosphatase NudF; PFAM: NUDIX hydrolase; ADP-ribose diphosphatase 669823 10211606 Rahaq_0632 Rahnella sp. Y9602 ADP-ribose diphosphatase YP_004211386.1 669191 D 741091 CDS YP_004211387.1 322831360 10211607 669823..670248 1 NC_015061.1 PFAM: protein of unknown function DUF1249; KEGG: enc:ECL_04361 hypothetical protein; hypothetical protein 670248 10211607 Rahaq_0633 Rahnella sp. Y9602 hypothetical protein YP_004211387.1 669823 D 741091 CDS YP_004211388.1 322831361 10211608 670276..671106 1 NC_015061.1 PFAM: Calcineurin phosphoesterase domain protein; metallophosphoesterase; KEGG: ypb:YPTS_3538 cyclic 3',5'-adenosine monophosphate phosphodiesterase; calcineurin phosphoesterase 671106 10211608 Rahaq_0634 Rahnella sp. Y9602 calcineurin phosphoesterase YP_004211388.1 670276 D 741091 CDS YP_004211389.1 322831362 10211609 671103..671684 1 NC_015061.1 PFAM: protein of unknown function UPF0227; KEGG: ddc:Dd586_0327 protein of unknown function UPF0227; hypothetical protein 671684 10211609 Rahaq_0635 Rahnella sp. Y9602 hypothetical protein YP_004211389.1 671103 D 741091 CDS YP_004211390.1 322831363 10211610 671801..673696 1 NC_015061.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA topoisomerase IV, B subunit; KEGG: spe:Spro_4263 DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; DNA gyrase subunit B domain protein; DNA topoisomerase IV subunit B 673696 10211610 Rahaq_0636 Rahnella sp. Y9602 DNA topoisomerase IV subunit B YP_004211390.1 671801 D 741091 CDS YP_004211391.1 322831364 10211611 complement(673780..674085) 1 NC_015061.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: sgl:SG0274 hypothetical protein; antibiotic biosynthesis monooxygenase 674085 10211611 Rahaq_0637 Rahnella sp. Y9602 antibiotic biosynthesis monooxygenase YP_004211391.1 673780 R 741091 CDS YP_004211392.1 322831365 10211612 complement(674116..674703) 1 NC_015061.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: ddd:Dda3937_01253 modulator of drug activity B; NAD(P)H dehydrogenase (quinone) 674703 10211612 Rahaq_0638 Rahnella sp. Y9602 NAD(P)H dehydrogenase (quinone) YP_004211392.1 674116 R 741091 CDS YP_004211393.1 322831366 10211613 675036..677309 1 NC_015061.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA topoisomerase IV, A subunit; KEGG: spe:Spro_4259 DNA topoisomerase IV subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; DNA topoisomerase IV subunit A 677309 10211613 Rahaq_0639 Rahnella sp. Y9602 DNA topoisomerase IV subunit A YP_004211393.1 675036 D 741091 CDS YP_004211394.1 322831367 10211614 677527..678264 1 NC_015061.1 SMART: phospholipid/glycerol acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; KEGG: enc:ECL_04340 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 678264 10211614 Rahaq_0640 Rahnella sp. Y9602 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_004211394.1 677527 D 741091 CDS YP_004211395.1 322831368 10211615 678399..679814 1 NC_015061.1 PFAM: multicopper oxidase type 3; Twin-arginine translocation pathway, signal sequence, subgroup; multicopper oxidase type 2; KEGG: yen:YE3654 repressor protein for FtsI; multicopper oxidase type 3 679814 10211615 Rahaq_0641 Rahnella sp. Y9602 multicopper oxidase type 3 YP_004211395.1 678399 D 741091 CDS YP_004211396.1 322831369 10211616 complement(679881..680705) 1 NC_015061.1 KEGG: ypb:YPTS_3528 2,5-diketo-D-gluconate reductase A; PFAM: aldo/keto reductase; 2,5-didehydrogluconate reductase 680705 10211616 Rahaq_0642 Rahnella sp. Y9602 2,5-didehydrogluconate reductase YP_004211396.1 679881 R 741091 CDS YP_004211397.1 322831370 10211617 complement(680832..681872) 1 NC_015061.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: pfo:Pfl01_2347 zinc-containing alcohol dehydrogenase superfamily protein; molecular chaperone GroES 681872 10211617 Rahaq_0643 Rahnella sp. Y9602 molecular chaperone GroES YP_004211397.1 680832 R 741091 CDS YP_004211398.1 322831371 10211618 682178..683113 1 NC_015061.1 KEGG: spe:Spro_4214 AraC family transcriptional regulator; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 683113 10211618 Rahaq_0644 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004211398.1 682178 D 741091 CDS YP_004211399.1 322831372 10211619 complement(683123..683782) 1 NC_015061.1 PFAM: SNARE associated Golgi protein; KEGG: pct:PC1_0340 SNARE associated Golgi protein; hypothetical protein 683782 10211619 Rahaq_0645 Rahnella sp. Y9602 hypothetical protein YP_004211399.1 683123 R 741091 CDS YP_004211400.1 322831373 10211620 complement(683999..685192) 1 NC_015061.1 KEGG: pwa:Pecwa_0384 cystathionine beta-lyase; TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; cystathionine beta-lyase 685192 10211620 Rahaq_0646 Rahnella sp. Y9602 cystathionine beta-lyase YP_004211400.1 683999 R 741091 CDS YP_004211401.1 322831374 10211621 complement(685371..686663) 1 NC_015061.1 KEGG: eca:ECA0355 DedA family membrane protein; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP dicarboxylate transporter subunit DctM 686663 10211621 Rahaq_0647 Rahnella sp. Y9602 TRAP dicarboxylate transporter subunit DctM YP_004211401.1 685371 R 741091 CDS YP_004211402.1 322831375 10211622 complement(686676..687188) 1 NC_015061.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: cko:CKO_03566 hypothetical protein; tripartite AtP-independent periplasmic transporter subunit DctQ 687188 10211622 Rahaq_0648 Rahnella sp. Y9602 tripartite AtP-independent periplasmic transporter subunit DctQ YP_004211402.1 686676 R 741091 CDS YP_004211403.1 322831376 10211623 complement(687245..688222) 1 NC_015061.1 KEGG: pct:PC1_0344 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7; TRAP dicarboxylate transporter subunit DctP 688222 10211623 Rahaq_0649 Rahnella sp. Y9602 TRAP dicarboxylate transporter subunit DctP YP_004211403.1 687245 R 741091 CDS YP_004211404.1 322831377 10211624 688724..689665 1 NC_015061.1 KEGG: pct:PC1_0345 TonB-system energizer ExbB; TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel; tonB-system energizer ExbB 689665 10211624 Rahaq_0650 Rahnella sp. Y9602 tonB-system energizer ExbB YP_004211404.1 688724 D 741091 CDS YP_004211405.1 322831378 10211625 689675..690109 1 NC_015061.1 KEGG: spe:Spro_4210 TonB system transport protein ExbD type-1; TIGRFAM: TonB system transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; TonB system transport protein ExbD 690109 10211625 Rahaq_0651 Rahnella sp. Y9602 TonB system transport protein ExbD YP_004211405.1 689675 D 741091 CDS YP_004211406.1 322831379 10211626 complement(690181..691752) 1 NC_015061.1 TIGRFAM: galactarate dehydratase; KEGG: pwa:Pecwa_3558 galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; galactarate dehydratase 691752 10211626 Rahaq_0652 Rahnella sp. Y9602 galactarate dehydratase YP_004211406.1 690181 R 741091 CDS YP_004211407.1 322831380 10211627 692304..693647 1 NC_015061.1 KEGG: ebd:ECBD_0615 D-galactonate transporter; TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; d-galactonate transporter 693647 10211627 Rahaq_0653 Rahnella sp. Y9602 d-galactonate transporter YP_004211407.1 692304 D 741091 CDS YP_004211408.1 322831381 10211628 693708..694478 1 NC_015061.1 TIGRFAM: 2-dehydro-3-deoxyglucarate aldolase; KEGG: dda:Dd703_0844 alpha-dehydro-beta-deoxy-D-glucarate aldolase; PFAM: HpcH/HpaI aldolase; 2-dehydro-3-deoxyglucarate aldolase 694478 10211628 Rahaq_0654 Rahnella sp. Y9602 2-dehydro-3-deoxyglucarate aldolase YP_004211408.1 693708 D 741091 CDS YP_004211409.1 322831382 10211629 694516..695400 1 NC_015061.1 TIGRFAM: 2-hydroxy-3-oxopropionate reductase; KEGG: pwa:Pecwa_3553 tartronate semialdehyde reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 2-hydroxy-3-oxopropionate reductase 695400 10211629 Rahaq_0655 Rahnella sp. Y9602 2-hydroxy-3-oxopropionate reductase YP_004211409.1 694516 D 741091 CDS YP_004211410.1 322831383 10211630 695521..696660 1 NC_015061.1 TIGRFAM: glycerate kinase; KEGG: pwa:Pecwa_3551 glycerate kinase; PFAM: glycerate kinase; glycerate kinase 696660 10211630 Rahaq_0656 Rahnella sp. Y9602 glycerate kinase YP_004211410.1 695521 D 741091 CDS YP_004211411.1 322831384 10211631 696778..698085 1 NC_015061.1 PFAM: alanine racemase domain protein; KEGG: bpt:Bpet1585 D-serine deaminase; alanine racemase 698085 10211631 Rahaq_0657 Rahnella sp. Y9602 alanine racemase YP_004211411.1 696778 D 741091 CDS YP_004211412.1 322831385 10211632 complement(698133..700883) 1 NC_015061.1 KEGG: spe:Spro_0790 hybrid sensory histidine kinase BarA; PFAM: Protein of unknown function DUF2222; histidine kinase HAMP region domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; response regulator receiver; Hpt domain protein; multi-sensor hybrid histidine kinase 700883 10211632 Rahaq_0658 Rahnella sp. Y9602 multi-sensor hybrid histidine kinase YP_004211412.1 698133 R 741091 CDS YP_004211413.1 322831386 10211633 700947..702317 1 NC_015061.1 KEGG: yen:YE0743 23S rRNA 5-methyluridine methyltransferase; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; TrmA family RNA methyltransferase 702317 10211633 Rahaq_0659 Rahnella sp. Y9602 TrmA family RNA methyltransferase YP_004211413.1 700947 D 741091 CDS YP_004211414.1 322831387 10211634 702327..704564 1 NC_015061.1 TIGRFAM: RelA/SpoT family protein; KEGG: spe:Spro_0792 GDP/GTP pyrophosphokinase; PFAM: RelA/SpoT domain protein; TGS domain-containing protein; amino acid-binding ACT domain protein; (p)ppGpp synthetase I SpoT/RelA 704564 10211634 Rahaq_0660 Rahnella sp. Y9602 (p)ppGpp synthetase I SpoT/RelA YP_004211414.1 702327 D 741091 CDS YP_004211415.1 322831388 10211635 704643..705446 1 NC_015061.1 KEGG: spe:Spro_0793 nucleoside triphosphate pyrophosphohydrolase; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; MazG family protein 705446 10211635 Rahaq_0661 Rahnella sp. Y9602 MazG family protein YP_004211415.1 704643 D 741091 CDS YP_004211416.1 322831389 10211636 705795..707432 1 NC_015061.1 TIGRFAM: CTP synthase; KEGG: spe:Spro_0794 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I; CTP synthase 707432 10211636 Rahaq_0662 Rahnella sp. Y9602 CTP synthase YP_004211416.1 705795 D 741091 CDS YP_004211417.1 322831390 10211637 707508..708812 1 NC_015061.1 TIGRFAM: enolase; KEGG: pwa:Pecwa_3545 phosphopyruvate hydratase; PFAM: Enolase-like; enolase 708812 10211637 Rahaq_0663 Rahnella sp. Y9602 enolase YP_004211417.1 707508 D 741091 CDS YP_004211418.1 322831391 10211638 708934..710256 1 NC_015061.1 PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein; transposase IS4 family protein 710256 10211638 Rahaq_0664 Rahnella sp. Y9602 transposase IS4 family protein YP_004211418.1 708934 D 741091 CDS YP_004211419.1 322831392 10211639 complement(710324..711163) 1 NC_015061.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: ent:Ent638_3232 transcriptional regulator; RpiR family transcriptional regulator 711163 10211639 Rahaq_0665 Rahnella sp. Y9602 RpiR family transcriptional regulator YP_004211419.1 710324 R 741091 CDS YP_004211420.1 322831393 10211640 711329..712882 1 NC_015061.1 KEGG: ent:Ent638_3231 PTS system, glucose-like IIB subunint; TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; PTS system glucose-like transporter subunit IIB 712882 10211640 Rahaq_0666 Rahnella sp. Y9602 PTS system glucose-like transporter subunit IIB YP_004211420.1 711329 D 741091 CDS YP_004211421.1 322831394 10211641 712879..713577 1 NC_015061.1 KEGG: ctu:Ctu_33340 N-acetylmannosamine-6-phosphate 2-epimerase; PFAM: N-acetylmannosamine-6-phosphate epimerase; N-acylglucosamine-6-phosphate 2-epimerase 713577 10211641 Rahaq_0667 Rahnella sp. Y9602 N-acylglucosamine-6-phosphate 2-epimerase YP_004211421.1 712879 D 741091 CDS YP_004211422.1 322831395 10211642 713679..714350 1 NC_015061.1 PFAM: Radical SAM domain protein; KEGG: spe:Spro_0808 radical SAM domain-containing protein; radical SAM protein 714350 10211642 Rahaq_0668 Rahnella sp. Y9602 radical SAM protein YP_004211422.1 713679 D 741091 CDS YP_004211423.1 322831396 10211643 complement(714364..714723) 1 NC_015061.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: kpu:KP1_4390 6-pyruvoyl tetrahydrobiopterin synthase; 6-pyruvoyl tetrahydrobiopterin synthase 714723 10211643 Rahaq_0669 Rahnella sp. Y9602 6-pyruvoyl tetrahydrobiopterin synthase YP_004211423.1 714364 R 741091 CDS YP_004211424.1 322831397 10211644 714893..715897 1 NC_015061.1 KEGG: dda:Dd703_0980 hypothetical protein; hypothetical protein 715897 10211644 Rahaq_0670 Rahnella sp. Y9602 hypothetical protein YP_004211424.1 714893 D 741091 CDS YP_004211425.1 322831398 10211645 716243..718045 1 NC_015061.1 KEGG: ebi:EbC_35390 sulfite reductase [NADPH] flavoprotein alpha-component; TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha chain; PFAM: FAD-binding domain protein; flavodoxin/nitric oxide synthase; oxidoreductase FAD/NAD(P)-binding domain protein; sulfite reductase (NADPH) flavoprotein, alpha chain 718045 10211645 Rahaq_0671 Rahnella sp. Y9602 sulfite reductase (NADPH) flavoprotein, alpha chain YP_004211425.1 716243 D 741091 CDS YP_004211426.1 322831399 10211646 718073..719809 1 NC_015061.1 KEGG: spe:Spro_0811 sulfite reductase subunit beta; TIGRFAM: sulfite reductase (NADPH) hemoprotein, beta-component; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; sulfite reductase (NADPH) hemoprotein subunit beta 719809 10211646 Rahaq_0672 Rahnella sp. Y9602 sulfite reductase (NADPH) hemoprotein subunit beta YP_004211426.1 718073 D 741091 CDS YP_004211427.1 322831400 10211647 719834..720571 1 NC_015061.1 KEGG: spe:Spro_0812 phosphoadenosine phosphosulfate reductase; TIGRFAM: phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase; phosphoadenosine phosphosulfate reductase 720571 10211647 Rahaq_0673 Rahnella sp. Y9602 phosphoadenosine phosphosulfate reductase YP_004211427.1 719834 D 741091 CDS YP_004211428.1 322831401 10211648 complement(720731..721768) 1 NC_015061.1 PFAM: peptidase M28; KEGG: spe:Spro_0815 alkaline phosphatase isozyme conversion aminopeptidase; peptidase M28 721768 10211648 Rahaq_0674 Rahnella sp. Y9602 peptidase M28 YP_004211428.1 720731 R 741091 CDS YP_004211429.1 322831402 10211649 722020..723444 1 NC_015061.1 KEGG: spe:Spro_0817 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Sirohaem synthase, dimerisation domain; uroporphyrin-III C-methyltransferase 723444 10211649 Rahaq_0675 Rahnella sp. Y9602 uroporphyrin-III C-methyltransferase YP_004211429.1 722020 D 741091 CDS YP_004211430.1 322831403 10211650 723455..724363 1 NC_015061.1 KEGG: kva:Kvar_0951 sulfate adenylyltransferase, small subunit; TIGRFAM: sulfate adenylyltransferase, small subunit; PFAM: phosphoadenosine phosphosulfate reductase; sulfate adenylyltransferase, small subunit 724363 10211650 Rahaq_0676 Rahnella sp. Y9602 sulfate adenylyltransferase, small subunit YP_004211430.1 723455 D 741091 CDS YP_004211431.1 322831404 10211651 724377..725804 1 NC_015061.1 TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein; KEGG: yen:YE0763 sulfate adenylyltransferase subunit 1; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; sulfate adenylyltransferase, large subunit 725804 10211651 Rahaq_0677 Rahnella sp. Y9602 sulfate adenylyltransferase, large subunit YP_004211431.1 724377 D 741091 CDS YP_004211432.1 322831405 10211652 725806..726429 1 NC_015061.1 TIGRFAM: adenylylsulfate kinase; KEGG: ypb:YPTS_0801 adenylylsulfate kinase; PFAM: adenylylsulfate kinase; adenylylsulfate kinase 726429 10211652 Rahaq_0678 Rahnella sp. Y9602 adenylylsulfate kinase YP_004211432.1 725806 D 741091 CDS YP_004211433.1 322831406 10211653 726489..726869 1 NC_015061.1 KEGG: spe:Spro_0821 hypothetical protein; hypothetical protein 726869 10211653 Rahaq_0679 Rahnella sp. Y9602 hypothetical protein YP_004211433.1 726489 D 741091 CDS YP_004211434.1 322831407 10211654 727037..727357 1 NC_015061.1 PFAM: Septum formation initiator; KEGG: spe:Spro_0825 cell division protein FtsB; septum formation initiator 727357 10211654 Rahaq_0680 Rahnella sp. Y9602 septum formation initiator YP_004211434.1 727037 D 741091 CDS YP_004211435.1 322831408 10211655 727360..728079 1 NC_015061.1 manually curated; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; KEGG: yps:YPTB0770 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 728079 10211655 Rahaq_0681 Rahnella sp. Y9602 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_004211435.1 727360 D 741091 CDS YP_004211436.1 322831409 10211656 728079..728552 1 NC_015061.1 KEGG: spe:Spro_0827 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 728552 10211656 Rahaq_0682 Rahnella sp. Y9602 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase YP_004211436.1 728079 D 741091 CDS YP_004211437.1 322831410 10211657 728572..729621 1 NC_015061.1 PFAM: tRNA pseudouridine synthase D TruD; KEGG: spe:Spro_0828 tRNA pseudouridine synthase D; tRNA pseudouridine synthase D TruD 729621 10211657 Rahaq_0683 Rahnella sp. Y9602 tRNA pseudouridine synthase D TruD YP_004211437.1 728572 D 741091 CDS YP_004211438.1 322831411 10211658 729602..730366 1 NC_015061.1 KEGG: spe:Spro_0829 stationary phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; stationary-phase survival protein SurE 730366 10211658 Rahaq_0684 Rahnella sp. Y9602 stationary-phase survival protein SurE YP_004211438.1 729602 D 741091 CDS YP_004211439.1 322831412 10211659 730356..730982 1 NC_015061.1 TIGRFAM: protein-L-isoaspartate O-methyltransferase; KEGG: spe:Spro_0830 protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 730982 10211659 Rahaq_0685 Rahnella sp. Y9602 protein-L-isoaspartate O-methyltransferase YP_004211439.1 730356 D 741091 CDS YP_004211440.1 322831413 10211660 731225..732247 1 NC_015061.1 KEGG: spe:Spro_0831 lipoprotein NlpD; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; peptidase M23 732247 10211660 Rahaq_0686 Rahnella sp. Y9602 peptidase M23 YP_004211440.1 731225 D 741091 CDS YP_004211441.1 322831414 10211661 732299..733285 1 NC_015061.1 KEGG: spe:Spro_0832 RNA polymerase sigma factor RpoS; TIGRFAM: RNA polymerase sigma factor RpoS; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein; RpoD subfamily RNA polymerase sigma-70 subunit 733285 10211661 Rahaq_0687 Rahnella sp. Y9602 RpoD subfamily RNA polymerase sigma-70 subunit YP_004211441.1 732299 D 741091 CDS YP_004211442.1 322831415 10211662 complement(733384..735939) 1 NC_015061.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; KEGG: yen:YE0776 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; DNA mismatch repair protein MutS 735939 10211662 Rahaq_0688 Rahnella sp. Y9602 DNA mismatch repair protein MutS YP_004211442.1 733384 R 741091 CDS YP_004211443.1 322831416 10211663 736362..739022 1 NC_015061.1 KEGG: bxe:Bxe_A0802 hypothetical protein; hypothetical protein 739022 10211663 Rahaq_0689 Rahnella sp. Y9602 hypothetical protein YP_004211443.1 736362 D 741091 CDS YP_004211444.1 322831417 10211664 739176..740279 1 NC_015061.1 TIGRFAM: lytic murein transglycosylase B; KEGG: ypz:YPZ3_2604 membrane-bound lytic murein transglycosylase B; lytic murein transglycosylase B 740279 10211664 Rahaq_0690 Rahnella sp. Y9602 lytic murein transglycosylase B YP_004211444.1 739176 D 741091 CDS YP_004211445.1 322831418 10211665 740441..740935 1 NC_015061.1 PFAM: CinA domain protein; KEGG: spe:Spro_0840 competence damage-inducible protein A; CinA domain-containing protein 740935 10211665 Rahaq_0691 Rahnella sp. Y9602 CinA domain-containing protein YP_004211445.1 740441 D 741091 CDS YP_004211446.1 322831419 10211666 741043..742107 1 NC_015061.1 TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: yen:YE0829 recombinase A; SMART: AAA ATPase; recA protein 742107 10211666 Rahaq_0692 Rahnella sp. Y9602 recA protein YP_004211446.1 741043 D 741091 CDS YP_004211447.1 322831420 10211667 742228..742917 1 NC_015061.1 PFAM: regulatory protein RecX; KEGG: ypy:YPK_3374 recombination regulator RecX; regulatory protein RecX 742917 10211667 Rahaq_0693 Rahnella sp. Y9602 regulatory protein RecX YP_004211447.1 742228 D 741091 CDS YP_004211448.1 322831421 10211668 743056..745683 1 NC_015061.1 KEGG: spe:Spro_0843 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1; alanyl-tRNA synthetase 745683 10211668 Rahaq_0694 Rahnella sp. Y9602 alanyl-tRNA synthetase YP_004211448.1 743056 D 741091 CDS YP_004211449.1 322831422 10211669 745940..746125 1 NC_015061.1 KEGG: ebi:EbC_34800 carbon storage regulator; TIGRFAM: carbon storage regulator; PFAM: carbon storage regulator; carbon storage regulator CsrA 746125 10211669 Rahaq_0695 Rahnella sp. Y9602 carbon storage regulator CsrA YP_004211449.1 745940 D 741091 CDS YP_004211450.1 322831423 10211674 747157..747723 1 NC_015061.1 KEGG: spe:Spro_0845 fructose-1-phosphatase; TIGRFAM: beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; beta-phosphoglucomutase family hydrolase 747723 10211674 Rahaq_0696 Rahnella sp. Y9602 beta-phosphoglucomutase family hydrolase YP_004211450.1 747157 D 741091 CDS YP_004211451.1 322831424 10211675 747720..748148 1 NC_015061.1 KEGG: ypb:YPTS_0864 hypothetical protein; hypothetical protein 748148 10211675 Rahaq_0697 Rahnella sp. Y9602 hypothetical protein YP_004211451.1 747720 D 741091 CDS YP_004211452.1 322831425 10211676 748234..749805 1 NC_015061.1 KEGG: spe:Spro_0847 glutamate--cysteine ligase; TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase; glutamate/cysteine ligase 749805 10211676 Rahaq_0698 Rahnella sp. Y9602 glutamate/cysteine ligase YP_004211452.1 748234 D 741091 CDS YP_004211453.1 322831426 10211677 749963..750478 1 NC_015061.1 KEGG: spe:Spro_0848 S-ribosylhomocysteinase; PFAM: LuxS protein; quorum-sensing autoinducer 2 (AI-2), LuxS 750478 10211677 Rahaq_0699 Rahnella sp. Y9602 quorum-sensing autoinducer 2 (AI-2), LuxS YP_004211453.1 749963 D 741091 CDS YP_004211454.1 322831427 10211678 complement(750548..751837) 1 NC_015061.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: spe:Spro_0849 hypothetical protein; hypothetical protein 751837 10211678 Rahaq_0700 Rahnella sp. Y9602 hypothetical protein YP_004211454.1 750548 R 741091 CDS YP_004211455.1 322831428 10211679 complement(751854..752645) 1 NC_015061.1 PFAM: cytochrome c assembly protein; KEGG: spe:Spro_0850 cytochrome c assembly protein; cytochrome c assembly protein 752645 10211679 Rahaq_0701 Rahnella sp. Y9602 cytochrome c assembly protein YP_004211455.1 751854 R 741091 CDS YP_004211456.1 322831429 10211680 752810..754171 1 NC_015061.1 TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; KEGG: spe:Spro_0851 signal recognition particle protein; SMART: AAA ATPase; signal recognition particle protein 754171 10211680 Rahaq_0702 Rahnella sp. Y9602 signal recognition particle protein YP_004211456.1 752810 D 741091 CDS YP_004211457.1 322831430 10211681 754290..754598 1 NC_015061.1 manually curated; TIGRFAM: ribosomal protein S16; KEGG: pam:PANA_3023 RpsP; PFAM: ribosomal protein S16; 30S ribosomal protein S16 754598 10211681 Rahaq_0703 Rahnella sp. Y9602 30S ribosomal protein S16 YP_004211457.1 754290 D 741091 CDS YP_004211458.1 322831431 10211682 754617..755165 1 NC_015061.1 KEGG: yen:YE0844 16S rRNA-processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; 16S rRNA-processing protein RimM 755165 10211682 Rahaq_0704 Rahnella sp. Y9602 16S rRNA-processing protein RimM YP_004211458.1 754617 D 741091 CDS YP_004211459.1 322831432 10211683 755233..756006 1 NC_015061.1 TIGRFAM: tRNA (guanine-N1)-methyltransferase; KEGG: spe:Spro_0854 tRNA (guanine-N(1)-)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N1)-methyltransferase 756006 10211683 Rahaq_0705 Rahnella sp. Y9602 tRNA (guanine-N1)-methyltransferase YP_004211459.1 755233 D 741091 CDS YP_004211460.1 322831433 10211684 756055..756402 1 NC_015061.1 KEGG: yen:YE0846 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19; 50S ribosomal protein L19 756402 10211684 Rahaq_0706 Rahnella sp. Y9602 50S ribosomal protein L19 YP_004211460.1 756055 D 741091 CDS YP_004211461.1 322831434 10211685 complement(756495..756674) 1 NC_015061.1 PFAM: transcriptional activator Ogr/delta; KEGG: spe:Spro_0856 transcriptional activator Ogr/delta; transcriptional activator Ogr/delta 756674 10211685 Rahaq_0707 Rahnella sp. Y9602 transcriptional activator Ogr/delta YP_004211461.1 756495 R 741091 CDS YP_004211462.1 322831435 10211686 complement(756739..757839) 1 NC_015061.1 KEGG: kpn:KPN_04858 prophage tail protein; prophage tail protein 757839 10211686 Rahaq_0708 Rahnella sp. Y9602 prophage tail protein YP_004211462.1 756739 R 741091 CDS YP_004211463.1 322831436 10211687 complement(757842..758312) 1 NC_015061.1 PFAM: P2 GpU family protein; KEGG: pct:PC1_3197 P2 GpU family protein; P2 GpU family protein 758312 10211687 Rahaq_0709 Rahnella sp. Y9602 P2 GpU family protein YP_004211463.1 757842 R 741091 CDS YP_004211464.1 322831437 10211688 complement(758309..759940) 1 NC_015061.1 KEGG: yps:YPTB1741 bacteriophage P2 tail protein gpT; hypothetical protein 759940 10211688 Rahaq_0710 Rahnella sp. Y9602 hypothetical protein YP_004211464.1 758309 R 741091 CDS YP_004211465.1 322831438 10211689 complement(759933..760067) 1 NC_015061.1 KEGG: spe:Spro_0860 P2 GpE family protein; manually curated; PFAM: P2 GpE family protein; P2 GpE family protein 760067 10211689 Rahaq_0711 Rahnella sp. Y9602 P2 GpE family protein YP_004211465.1 759933 R 741091 CDS YP_004211466.1 322831439 10211690 complement(760088..760375) 1 NC_015061.1 PFAM: tail E family protein; KEGG: spe:Spro_0861 tail E family protein; tail E family protein 760375 10211690 Rahaq_0712 Rahnella sp. Y9602 tail E family protein YP_004211466.1 760088 R 741091 CDS YP_004211467.1 322831440 10211691 complement(760435..760944) 1 NC_015061.1 KEGG: spe:Spro_0862 phage major tail tube protein; TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; phage major tail tube protein 760944 10211691 Rahaq_0713 Rahnella sp. Y9602 phage major tail tube protein YP_004211467.1 760435 R 741091 CDS YP_004211468.1 322831441 10211692 complement(760959..762128) 1 NC_015061.1 KEGG: spe:Spro_0863 tail sheath protein; tail sheath protein 762128 10211692 Rahaq_0714 Rahnella sp. Y9602 tail sheath protein YP_004211468.1 760959 R 741091 CDS YP_004211469.1 322831442 10211693 complement(762299..763258) 1 NC_015061.1 PFAM: Tail Collar domain protein; KEGG: ent:Ent638_3484 phage tail collar domain-containing protein; Tail Collar domain-containing protein 763258 10211693 Rahaq_0715 Rahnella sp. Y9602 Tail Collar domain-containing protein YP_004211469.1 762299 R 741091 CDS YP_004211470.1 322831443 10211694 complement(763248..763862) 1 NC_015061.1 TIGRFAM: phage tail protein I; KEGG: yps:YPTB1748 bacteriophage protein; phage tail protein I 763862 10211694 Rahaq_0716 Rahnella sp. Y9602 phage tail protein I YP_004211470.1 763248 R 741091 CDS YP_004211471.1 322831444 10211695 complement(763855..764763) 1 NC_015061.1 PFAM: Baseplate J family protein; KEGG: xne:XNC1_1190 baseplate assembly protein J (GpJ); baseplate J family protein 764763 10211695 Rahaq_0717 Rahnella sp. Y9602 baseplate J family protein YP_004211471.1 763855 R 741091 CDS YP_004211472.1 322831445 10211696 complement(764769..765119) 1 NC_015061.1 PFAM: GPW/gp25 family protein; KEGG: spe:Spro_0868 gpW/GP25 family protein; GPW/gp25 family protein 765119 10211696 Rahaq_0718 Rahnella sp. Y9602 GPW/gp25 family protein YP_004211472.1 764769 R 741091 CDS YP_004211473.1 322831446 10211697 complement(765116..765757) 1 NC_015061.1 TIGRFAM: phage baseplate assembly protein V; KEGG: dze:Dd1591_1827 phage baseplate assembly protein V; phage baseplate assembly protein V 765757 10211697 Rahaq_0719 Rahnella sp. Y9602 phage baseplate assembly protein V YP_004211473.1 765116 R 741091 CDS YP_004211474.1 322831447 10211698 complement(765839..766300) 1 NC_015061.1 KEGG: pam:PANA_3412 R; phage tail completion protein GpR 766300 10211698 Rahaq_0720 Rahnella sp. Y9602 phage tail completion protein GpR YP_004211474.1 765839 R 741091 CDS YP_004211475.1 322831448 10211699 complement(766393..766821) 1 NC_015061.1 TIGRFAM: phage lysis regulatory protein, LysB family; KEGG: yps:YPTB1754 Orf27; P2 LysB homolog; control of lysis [Ente; phage lysis regulatory protein, LysB family 766821 10211699 Rahaq_0721 Rahnella sp. Y9602 phage lysis regulatory protein, LysB family YP_004211475.1 766393 R 741091 CDS YP_004211476.1 322831449 10211700 complement(766822..767331) 1 NC_015061.1 PFAM: glycoside hydrolase family 24; KEGG: spe:Spro_0871 glycoside hydrolase family protein; glycoside hydrolase 767331 10211700 Rahaq_0722 Rahnella sp. Y9602 glycoside hydrolase YP_004211476.1 766822 R 741091 CDS YP_004211477.1 322831450 10211701 complement(767312..767533) 1 NC_015061.1 KEGG: spe:Spro_0872 prophage Hp1 family holin; prophage Hp1 family holin 767533 10211701 Rahaq_0723 Rahnella sp. Y9602 prophage Hp1 family holin YP_004211477.1 767312 R 741091 CDS YP_004211478.1 322831451 10211702 complement(767524..767727) 1 NC_015061.1 PFAM: tail X family protein; KEGG: spe:Spro_0873 tail X family protein; tail X family protein 767727 10211702 Rahaq_0724 Rahnella sp. Y9602 tail X family protein YP_004211478.1 767524 R 741091 CDS YP_004211479.1 322831452 10211703 complement(767939..768133) 1 NC_015061.1 KEGG: ddd:Dda3937_03773 hypothetical protein; hypothetical protein 768133 10211703 Rahaq_0725 Rahnella sp. Y9602 hypothetical protein YP_004211479.1 767939 R 741091 CDS YP_004211480.1 322831453 10211704 complement(768282..770174) 1 NC_015061.1 PFAM: replication gene A; KEGG: pct:PC1_3164 replication protein A; replication protein A 770174 10211704 Rahaq_0726 Rahnella sp. Y9602 replication protein A YP_004211480.1 768282 R 741091 CDS YP_004211481.1 322831454 10211705 complement(770268..770489) 1 NC_015061.1 TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; KEGG: ddd:Dda3937_03774 hypothetical protein; phage/conjugal plasmid C-4 type zinc finger protein, TraR family 770489 10211705 Rahaq_0727 Rahnella sp. Y9602 phage/conjugal plasmid C-4 type zinc finger protein, TraR family YP_004211481.1 770268 R 741091 CDS YP_004211482.1 322831455 10211706 complement(770489..770764) 1 NC_015061.1 KEGG: spe:Spro_0876 gpB bacteriophage P2-like protein; gpB bacteriophage P2-like protein 770764 10211706 Rahaq_0728 Rahnella sp. Y9602 gpB bacteriophage P2-like protein YP_004211482.1 770489 R 741091 CDS YP_004211483.1 322831456 10211707 770897..771487 1 NC_015061.1 PFAM: CI repressor; KEGG: spe:Spro_0877 CI repressor; CI repressor 771487 10211707 Rahaq_0729 Rahnella sp. Y9602 CI repressor YP_004211483.1 770897 D 741091 CDS YP_004211484.1 322831457 10211708 771776..772852 1 NC_015061.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: spe:Spro_0879 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase 772852 10211708 Rahaq_0730 Rahnella sp. Y9602 phospho-2-dehydro-3-deoxyheptonate aldolase YP_004211484.1 771776 D 741091 CDS YP_004211485.1 322831458 10211709 772859..773980 1 NC_015061.1 TIGRFAM: chorismate mutase; KEGG: yen:YE0851 bifunctional chorismate mutase/prephenate dehydrogenase; PFAM: Chorismate mutase, type II; Prephenate dehydrogenase; chorismate mutase 773980 10211709 Rahaq_0731 Rahnella sp. Y9602 chorismate mutase YP_004211485.1 772859 D 741091 CDS YP_004211486.1 322831459 10211710 complement(774058..775212) 1 NC_015061.1 KEGG: yen:YE0852 bifunctional chorismate mutase/prephenate dehydratase; TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase, type II; chorismate mutase 775212 10211710 Rahaq_0732 Rahnella sp. Y9602 chorismate mutase YP_004211486.1 774058 R 741091 CDS YP_004211487.1 322831460 10211711 complement(775523..775867) 1 NC_015061.1 KEGG: eca:ECA3349 sigma(54) modulation protein; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/ribosomal protein S30EA 775867 10211711 Rahaq_0733 Rahnella sp. Y9602 sigma 54 modulation protein/ribosomal protein S30EA YP_004211487.1 775523 R 741091 CDS YP_004211488.1 322831461 10211712 complement(776149..776883) 1 NC_015061.1 TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: spe:Spro_0883 outer membrane protein assembly complex subunit YfiO; outer membrane assembly lipoprotein YfiO 776883 10211712 Rahaq_0734 Rahnella sp. Y9602 outer membrane assembly lipoprotein YfiO YP_004211488.1 776149 R 741091 CDS YP_004211489.1 322831462 10211713 777014..777991 1 NC_015061.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: spe:Spro_0884 23S rRNA pseudouridine synthase D; SMART: RNA-binding S4 domain protein; pseudouridine synthase 777991 10211713 Rahaq_0735 Rahnella sp. Y9602 pseudouridine synthase YP_004211489.1 777014 D 741091 CDS YP_004211490.1 322831463 10211714 777991..778728 1 NC_015061.1 PFAM: protein of unknown function DUF152; KEGG: pct:PC1_3142 hypothetical protein; hypothetical protein 778728 10211714 Rahaq_0736 Rahnella sp. Y9602 hypothetical protein YP_004211490.1 777991 D 741091 CDS YP_004211491.1 322831464 10211715 778859..781432 1 NC_015061.1 TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase; Clp ATPase-like; KEGG: spe:Spro_0886 protein disaggregation chaperone; SMART: AAA ATPase; ATP-dependent chaperone ClpB 781432 10211715 Rahaq_0737 Rahnella sp. Y9602 ATP-dependent chaperone ClpB YP_004211491.1 778859 D 741091 CDS YP_004211492.1 322831465 10211721 787399..788697 1 NC_015061.1 TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); KEGG: spe:Spro_3751 alpha-ketoglutarate transporter; metabolite/H+ symporter, major facilitator superfamily (MFS) 788697 10211721 Rahaq_0738 Rahnella sp. Y9602 metabolite/H+ symporter, major facilitator superfamily (MFS) YP_004211492.1 787399 D 741091 CDS YP_004211493.1 322831466 10211722 complement(788887..790242) 1 NC_015061.1 KEGG: spe:Spro_3749 phosphatidylserine synthase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; phospholipase D/Transphosphatidylase 790242 10211722 Rahaq_0739 Rahnella sp. Y9602 phospholipase D/Transphosphatidylase YP_004211493.1 788887 R 741091 CDS YP_004211494.1 322831467 10211723 complement(790327..793047) 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: spe:Spro_3748 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 793047 10211723 Rahaq_0740 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004211494.1 790327 R 741091 CDS YP_004211495.1 322831468 10211724 complement(793079..793783) 1 NC_015061.1 PFAM: DTW domain containing protein; KEGG: ypb:YPTS_0894 DTW domain-containing protein; DTW domain containing protein 793783 10211724 Rahaq_0741 Rahnella sp. Y9602 DTW domain containing protein YP_004211495.1 793079 R 741091 CDS YP_004211496.1 322831469 10211725 complement(793913..794332) 1 NC_015061.1 KEGG: pam:PANA_3003 TrxC; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein; thioredoxin 794332 10211725 Rahaq_0742 Rahnella sp. Y9602 thioredoxin YP_004211496.1 793913 R 741091 CDS YP_004211497.1 322831470 10211726 794577..795680 1 NC_015061.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: spe:Spro_3745 methyltransferase; tRNA/rRNA methyltransferase SpoU 795680 10211726 Rahaq_0743 Rahnella sp. Y9602 tRNA/rRNA methyltransferase SpoU YP_004211497.1 794577 D 741091 CDS YP_004211498.1 322831471 10211727 complement(795756..797291) 1 NC_015061.1 KEGG: ypb:YPTS_0897 EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA subfamily drug resistance transporter 797291 10211727 Rahaq_0744 Rahnella sp. Y9602 EmrB/QacA subfamily drug resistance transporter YP_004211498.1 795756 R 741091 CDS YP_004211499.1 322831472 10211728 complement(797309..798484) 1 NC_015061.1 KEGG: spe:Spro_3743 efflux pump membrane protein; TIGRFAM: efflux pump membrane protein; PFAM: secretion protein HlyD family protein; efflux pump membrane protein 798484 10211728 Rahaq_0745 Rahnella sp. Y9602 efflux pump membrane protein YP_004211499.1 797309 R 741091 CDS YP_004211500.1 322831473 10211729 complement(798510..799964) 1 NC_015061.1 KEGG: spe:Spro_3742 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein 799964 10211729 Rahaq_0746 Rahnella sp. Y9602 NodT family RND efflux system outer membrane lipoprotein YP_004211500.1 798510 R 741091 CDS YP_004211501.1 322831474 10211730 complement(799988..800509) 1 NC_015061.1 KEGG: spe:Spro_3741 transcriptional repressor MprA; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR 800509 10211730 Rahaq_0747 Rahnella sp. Y9602 regulatory protein MarR YP_004211501.1 799988 R 741091 CDS YP_004211502.1 322831475 10211731 complement(800684..801022) 1 NC_015061.1 PFAM: branched-chain amino acid transport; KEGG: yen:YE3239 hypothetical protein; branched-chain amino acid transport 801022 10211731 Rahaq_0748 Rahnella sp. Y9602 branched-chain amino acid transport YP_004211502.1 800684 R 741091 CDS YP_004211503.1 322831476 10211732 complement(801012..801773) 1 NC_015061.1 PFAM: AzlC family protein; KEGG: ypb:YPTS_0901 AzlC family protein; AzlC family protein 801773 10211732 Rahaq_0749 Rahnella sp. Y9602 AzlC family protein YP_004211503.1 801012 R 741091 CDS YP_004211504.1 322831477 10211733 complement(801948..803132) 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: ypz:YPZ3_2867 probable sugar transporter; major facilitator superfamily protein 803132 10211733 Rahaq_0750 Rahnella sp. Y9602 major facilitator superfamily protein YP_004211504.1 801948 R 741091 CDS YP_004211505.1 322831478 10211734 complement(803301..803732) 1 NC_015061.1 KEGG: plu:plu3021 hypothetical protein; hypothetical protein 803732 10211734 Rahaq_0751 Rahnella sp. Y9602 hypothetical protein YP_004211505.1 803301 R 741091 CDS YP_004211506.1 322831479 10211735 complement(803754..803936) 1 NC_015061.1 PFAM: YcfA family protein; KEGG: ecf:ECH74115_A0043 hypothetical protein; hypothetical protein 803936 10211735 Rahaq_0752 Rahnella sp. Y9602 hypothetical protein YP_004211506.1 803754 R 741091 CDS YP_004211507.1 322831480 10211736 complement(804053..805048) 1 NC_015061.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: ecg:E2348C_2944 glycine betaine transporter periplasmic subunit; glycine betaine ABC transporter substrate-binding protein 805048 10211736 Rahaq_0753 Rahnella sp. Y9602 glycine betaine ABC transporter substrate-binding protein YP_004211507.1 804053 R 741091 CDS YP_004211508.1 322831481 10211737 complement(805073..806083) 1 NC_015061.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: ebi:EbC_22190 osmoprotectant transport protein OusBX; glycine betaine ABC transporter substrate-binding protein 806083 10211737 Rahaq_0754 Rahnella sp. Y9602 glycine betaine ABC transporter substrate-binding protein YP_004211508.1 805073 R 741091 CDS YP_004211509.1 322831482 10211738 complement(806189..807388) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3734 glycine betaine transporter membrane protein; binding-protein-dependent transport system inner membrane protein 807388 10211738 Rahaq_0755 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004211509.1 806189 R 741091 CDS YP_004211510.1 322831483 10211739 complement(807385..808581) 1 NC_015061.1 TIGRFAM: glycine betaine/L-proline ABC transporter ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; KEGG: yen:YE0925 glycine betaine/L-proline transport ATP-binding protein; SMART: AAA ATPase; glycine betaine/L-proline ABC transporter ATPase 808581 10211739 Rahaq_0756 Rahnella sp. Y9602 glycine betaine/L-proline ABC transporter ATPase YP_004211510.1 807385 R 741091 CDS YP_004211511.1 322831484 10211740 complement(809170..809883) 1 NC_015061.1 KEGG: spe:Spro_3732 response regulator receiver/unknown domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver; fused response regulator receiver/hypothetical protein 809883 10211740 Rahaq_0757 Rahnella sp. Y9602 fused response regulator receiver/hypothetical protein YP_004211511.1 809170 R 741091 CDS YP_004211512.1 322831485 10211741 complement(809876..811528) 1 NC_015061.1 KEGG: spe:Spro_3731 signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; signal transduction histidine kinase regulating citrate/malate metabolism 811528 10211741 Rahaq_0758 Rahnella sp. Y9602 signal transduction histidine kinase regulating citrate/malate metabolism YP_004211512.1 809876 R 741091 CDS YP_004211513.1 322831486 10211742 811848..813203 1 NC_015061.1 PFAM: Citrate carrier protein; KEGG: spe:Spro_3730 citrate carrier protein; citrate carrier protein 813203 10211742 Rahaq_0759 Rahnella sp. Y9602 citrate carrier protein YP_004211513.1 811848 D 741091 CDS YP_004211514.1 322831487 10211743 813398..813958 1 NC_015061.1 PFAM: NLP/P60 protein; KEGG: ctu:Ctu_40060 lipoprotein spr; NLP/P60 protein 813958 10211743 Rahaq_0760 Rahnella sp. Y9602 NLP/P60 protein YP_004211514.1 813398 D 741091 CDS YP_004211515.1 322831488 10211744 complement(814006..815049) 1 NC_015061.1 PFAM: aldo/keto reductase; KEGG: ent:Ent638_3410 aldo-keto reductase; aldo/keto reductase 815049 10211744 Rahaq_0761 Rahnella sp. Y9602 aldo/keto reductase YP_004211515.1 814006 R 741091 CDS YP_004211516.1 322831489 10211745 complement(815167..816150) 1 NC_015061.1 KEGG: pct:PC1_3134 ribonucleotide-diphosphate reductase subunit beta; PFAM: ribonucleotide reductase; ribonucleoside-diphosphate reductase 816150 10211745 Rahaq_0762 Rahnella sp. Y9602 ribonucleoside-diphosphate reductase YP_004211516.1 815167 R 741091 CDS YP_004211517.1 322831490 10211746 complement(816172..818334) 1 NC_015061.1 KEGG: ypb:YPTS_3074 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, subunit alpha; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase domain protein; Ribonucleotide reductase large subunit domain protein; ribonucleoside-diphosphate reductase subunit alpha 818334 10211746 Rahaq_0763 Rahnella sp. Y9602 ribonucleoside-diphosphate reductase subunit alpha YP_004211517.1 816172 R 741091 CDS YP_004211518.1 322831491 10211747 complement(818316..818720) 1 NC_015061.1 KEGG: pwa:Pecwa_1147 ribonucleotide reductase stimulatory protein; TIGRFAM: NrdI protein; PFAM: NrdI family protein; NrdI protein 818720 10211747 Rahaq_0764 Rahnella sp. Y9602 NrdI protein YP_004211518.1 818316 R 741091 CDS YP_004211519.1 322831492 10211748 complement(818731..818970) 1 NC_015061.1 KEGG: yen:YE0929 glutaredoxin; TIGRFAM: glutaredoxin-like protein NrdH; PFAM: glutaredoxin; glutaredoxin-like protein NrdH 818970 10211748 Rahaq_0765 Rahnella sp. Y9602 glutaredoxin-like protein NrdH YP_004211519.1 818731 R 741091 CDS YP_004211520.1 322831493 10211749 complement(819228..819659) 1 NC_015061.1 KEGG: spe:Spro_3720 alkylhydroperoxidase; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; alkylhydroperoxidase 819659 10211749 Rahaq_0766 Rahnella sp. Y9602 alkylhydroperoxidase YP_004211520.1 819228 R 741091 CDS YP_004211521.1 322831494 10211750 819783..821234 1 NC_015061.1 KEGG: yen:YE0931 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 821234 10211750 Rahaq_0767 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004211521.1 819783 D 741091 CDS YP_004211522.1 322831495 10211751 complement(821629..821934) 1 NC_015061.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: spe:Spro_3718 hypothetical protein; hypothetical protein 821934 10211751 Rahaq_0768 Rahnella sp. Y9602 hypothetical protein YP_004211522.1 821629 R 741091 CDS YP_004211523.1 322831496 10211752 822207..823403 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3711 major facilitator transporter; major facilitator superfamily protein 823403 10211752 Rahaq_0769 Rahnella sp. Y9602 major facilitator superfamily protein YP_004211523.1 822207 D 741091 CDS YP_004211524.1 322831497 10211753 823530..823865 1 NC_015061.1 PFAM: Protein of unknown function DUF2002; KEGG: spe:Spro_3710 hypothetical protein; hypothetical protein 823865 10211753 Rahaq_0770 Rahnella sp. Y9602 hypothetical protein YP_004211524.1 823530 D 741091 CDS YP_004211525.1 322831498 10211754 complement(823930..824817) 1 NC_015061.1 KEGG: gur:Gura_1217 transcription activator, effector binding; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 824817 10211754 Rahaq_0771 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004211525.1 823930 R 741091 CDS YP_004211526.1 322831499 10211755 complement(824944..825384) 1 NC_015061.1 PFAM: protein of unknown function DUF1198; KEGG: yen:YE0938 hypothetical protein; hypothetical protein 825384 10211755 Rahaq_0772 Rahnella sp. Y9602 hypothetical protein YP_004211526.1 824944 R 741091 CDS YP_004211527.1 322831500 10211756 complement(825544..826488) 1 NC_015061.1 KEGG: ecq:ECED1_1926 6-phosphofructokinase 2; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; 1-phosphofructokinase 826488 10211756 Rahaq_0773 Rahnella sp. Y9602 1-phosphofructokinase YP_004211527.1 825544 R 741091 CDS YP_004211528.1 322831501 10211757 826672..827202 1 NC_015061.1 PFAM: adenylate cyclase; KEGG: reu:Reut_A0631 adenylate cyclase; adenylate cyclase 827202 10211757 Rahaq_0774 Rahnella sp. Y9602 adenylate cyclase YP_004211528.1 826672 D 741091 CDS YP_004211529.1 322831502 10211758 complement(827251..828243) 1 NC_015061.1 KEGG: spe:Spro_3899 global regulator; TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); folate-binding protein YgfZ 828243 10211758 Rahaq_0775 Rahnella sp. Y9602 folate-binding protein YgfZ YP_004211529.1 827251 R 741091 CDS YP_004211530.1 322831503 10211759 828504..828788 1 NC_015061.1 PFAM: protein of unknown function DUF339; KEGG: enc:ECL_04223 hypothetical protein; hypothetical protein 828788 10211759 Rahaq_0776 Rahnella sp. Y9602 hypothetical protein YP_004211530.1 828504 D 741091 CDS YP_004211531.1 322831504 10211760 828769..829221 1 NC_015061.1 KEGG: spe:Spro_3897 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1434; hypothetical protein 829221 10211760 Rahaq_0777 Rahnella sp. Y9602 hypothetical protein YP_004211531.1 828769 D 741091 CDS YP_004211532.1 322831505 10211761 complement(829267..829785) 1 NC_015061.1 KEGG: spe:Spro_3893 flavodoxin FldB; TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; flavodoxin 829785 10211761 Rahaq_0778 Rahnella sp. Y9602 flavodoxin YP_004211532.1 829267 R 741091 CDS YP_004211533.1 322831506 10211762 829885..830844 1 NC_015061.1 KEGG: ypb:YPTS_3298 site-specific tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; tyrosine recombinase XerD 830844 10211762 Rahaq_0779 Rahnella sp. Y9602 tyrosine recombinase XerD YP_004211533.1 829885 D 741091 CDS YP_004211534.1 322831507 10211763 830870..831589 1 NC_015061.1 PFAM: Disulphide bond isomerase, DsbC/G-like; KEGG: spe:Spro_3891 thiol:disulfide interchange protein DsbC; disulfide bond isomerase, DsbC/G-like protein 831589 10211763 Rahaq_0780 Rahnella sp. Y9602 disulfide bond isomerase, DsbC/G-like protein YP_004211534.1 830870 D 741091 CDS YP_004211535.1 322831508 10211764 831596..833329 1 NC_015061.1 KEGG: spe:Spro_3890 ssDNA exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; single-stranded-DNA-specific exonuclease RecJ 833329 10211764 Rahaq_0781 Rahnella sp. Y9602 single-stranded-DNA-specific exonuclease RecJ YP_004211535.1 831596 D 741091 CDS YP_004211536.1 322831509 10211765 join(833460..833534,833536..834558) 1 NC_015061.1 manually curated; KEGG: ddd:Dda3937_02293 peptide chain release factor 2; Peptide chain release factor 2 834558 10211765 Rahaq_0782 Rahnella sp. Y9602 Peptide chain release factor 2 YP_004211536.1 833460 D 741091 CDS YP_004211537.1 322831510 10211766 834568..836097 1 NC_015061.1 TIGRFAM: lysyl-tRNA synthetase; KEGG: yen:YE3374 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; lysyl-tRNA synthetase 836097 10211766 Rahaq_0783 Rahnella sp. Y9602 lysyl-tRNA synthetase YP_004211537.1 834568 D 741091 CDS YP_004211538.1 322831511 10211768 836869..837120 1 NC_015061.1 KEGG: spe:Spro_0470 transcriptional regulator, Nlp; Nlp family transcriptional regulator 837120 10211768 Rahaq_0784 Rahnella sp. Y9602 Nlp family transcriptional regulator YP_004211538.1 836869 D 741091 CDS YP_004211539.1 322831512 10211769 complement(837192..838553) 1 NC_015061.1 TIGRFAM: argininosuccinate synthase; KEGG: ypb:YPTS_1693 argininosuccinate synthase; PFAM: argininosuccinate synthase; argininosuccinate synthase 838553 10211769 Rahaq_0785 Rahnella sp. Y9602 argininosuccinate synthase YP_004211539.1 837192 R 741091 CDS YP_004211540.1 322831513 10211770 complement(838704..839618) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pam:PANA_1889 CynR; LysR family transcriptional regulator 839618 10211770 Rahaq_0786 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004211540.1 838704 R 741091 CDS YP_004211541.1 322831514 10211771 839738..840877 1 NC_015061.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bmd:BMD_0329 peptidase M20; peptidase M20 840877 10211771 Rahaq_0787 Rahnella sp. Y9602 peptidase M20 YP_004211541.1 839738 D 741091 CDS YP_004211542.1 322831515 10211772 841243..841923 1 NC_015061.1 PFAM: nucleoside recognition domain protein; KEGG: pam:PANA_1891 YjiH; nucleoside recognition domain-containing protein 841923 10211772 Rahaq_0788 Rahnella sp. Y9602 nucleoside recognition domain-containing protein YP_004211542.1 841243 D 741091 CDS YP_004211543.1 322831516 10211773 841916..842383 1 NC_015061.1 PFAM: nucleoside recognition domain protein; KEGG: pam:PANA_1892 YjiG; nucleoside recognition domain-containing protein 842383 10211773 Rahaq_0789 Rahnella sp. Y9602 nucleoside recognition domain-containing protein YP_004211543.1 841916 D 741091 CDS YP_004211544.1 322831517 10211774 842431..843534 1 NC_015061.1 KEGG: pam:PANA_1893 AmhX; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 843534 10211774 Rahaq_0790 Rahnella sp. Y9602 amidohydrolase YP_004211544.1 842431 D 741091 CDS YP_004211545.1 322831518 10211775 complement(843590..844066) 1 NC_015061.1 KEGG: yen:YE3361 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 844066 10211775 Rahaq_0791 Rahnella sp. Y9602 AsnC family transcriptional regulator YP_004211545.1 843590 R 741091 CDS YP_004211546.1 322831519 10211776 844199..844615 1 NC_015061.1 PFAM: Protein of unknown function DUF2000; KEGG: yen:YE3360 hypothetical protein; hypothetical protein 844615 10211776 Rahaq_0792 Rahnella sp. Y9602 hypothetical protein YP_004211546.1 844199 D 741091 CDS YP_004211547.1 322831520 10211777 complement(844691..845875) 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: ebi:EbC_20390 sugar efflux transporter; major facilitator superfamily protein 845875 10211777 Rahaq_0793 Rahnella sp. Y9602 major facilitator superfamily protein YP_004211547.1 844691 R 741091 CDS YP_004211548.1 322831521 10211778 complement(846038..846592) 1 NC_015061.1 KEGG: bpy:Bphyt_6644 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; Ribosomal-protein-alanine N-acetyltransferase 846592 10211778 Rahaq_0794 Rahnella sp. Y9602 Ribosomal-protein-alanine N-acetyltransferase YP_004211548.1 846038 R 741091 CDS YP_004211549.1 322831522 10211779 complement(846644..847189) 1 NC_015061.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: mms:mma_1576 D-alanyl-D-alanine carboxypeptidase; peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin 847189 10211779 Rahaq_0795 Rahnella sp. Y9602 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin YP_004211549.1 846644 R 741091 CDS YP_004211550.1 322831523 10211780 complement(847186..848016) 1 NC_015061.1 PFAM: peptidase C26; KEGG: mag:amb4127 glutamine amidotransferase; peptidase C26 848016 10211780 Rahaq_0796 Rahnella sp. Y9602 peptidase C26 YP_004211550.1 847186 R 741091 CDS YP_004211551.1 322831524 10211781 848488..849831 1 NC_015061.1 KEGG: ebi:EbC_35960 multidrug resistance protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 849831 10211781 Rahaq_0797 Rahnella sp. Y9602 RND family efflux transporter MFP subunit YP_004211551.1 848488 D 741091 CDS YP_004211552.1 322831525 10211782 849828..853028 1 NC_015061.1 PFAM: acriflavin resistance protein; KEGG: ebi:EbC_35950 multidrug resistance protein; acriflavin resistance protein 853028 10211782 Rahaq_0798 Rahnella sp. Y9602 acriflavin resistance protein YP_004211552.1 849828 D 741091 CDS YP_004211553.1 322831526 10211783 853029..856154 1 NC_015061.1 PFAM: acriflavin resistance protein; KEGG: ebi:EbC_35940 multidrug resistance protein; acriflavin resistance protein 856154 10211783 Rahaq_0799 Rahnella sp. Y9602 acriflavin resistance protein YP_004211553.1 853029 D 741091 CDS YP_004211554.1 322831527 10211784 856147..857595 1 NC_015061.1 KEGG: ebi:EbC_35930 RND efflux system, outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein 857595 10211784 Rahaq_0800 Rahnella sp. Y9602 NodT family RND efflux system outer membrane lipoprotein YP_004211554.1 856147 D 741091 CDS YP_004211555.1 322831528 10211787 858363..858731 1 NC_015061.1 KEGG: vsa:VSAL_I0282 hypothetical protein; hypothetical protein 858731 10211787 Rahaq_0803 Rahnella sp. Y9602 hypothetical protein YP_004211555.1 858363 D 741091 CDS YP_004211556.1 322831529 10211788 859042..859311 1 NC_015061.1 KEGG: xne:XNC1_2606 sugar fermentation stimulation protein B (Ner-like protein); Nlp family transcriptional regulator 859311 10211788 Rahaq_0804 Rahnella sp. Y9602 Nlp family transcriptional regulator YP_004211556.1 859042 D 741091 CDS YP_004211557.1 322831530 10211789 859479..859736 1 NC_015061.1 KEGG: ypi:YpsIP31758_0357 DNA-damage-inducible protein J; TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; RelB/DinJ family addiction module antitoxin 859736 10211789 Rahaq_0805 Rahnella sp. Y9602 RelB/DinJ family addiction module antitoxin YP_004211557.1 859479 D 741091 CDS YP_004211558.1 322831531 10211790 859740..860006 1 NC_015061.1 manually curated; TIGRFAM: addiction module toxin, RelE/StbE family; KEGG: hde:HDEF_1232 addiction module toxin; PFAM: plasmid stabilization system; RelE/StbE family addiction module toxin 860006 10211790 Rahaq_0806 Rahnella sp. Y9602 RelE/StbE family addiction module toxin YP_004211558.1 859740 D 741091 CDS YP_004211559.1 322831532 10211791 complement(860066..861469) 1 NC_015061.1 KEGG: ebi:EbC_35970 RND efflux system, outer membrane protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein 861469 10211791 Rahaq_0807 Rahnella sp. Y9602 NodT family RND efflux system outer membrane lipoprotein YP_004211559.1 860066 R 741091 CDS YP_004211560.1 322831533 10211792 complement(861462..864611) 1 NC_015061.1 KEGG: ebi:EbC_35980 acriflavine resistance protein B; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 864611 10211792 Rahaq_0808 Rahnella sp. Y9602 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_004211560.1 861462 R 741091 CDS YP_004211561.1 322831534 10211793 complement(864621..865790) 1 NC_015061.1 KEGG: ebi:EbC_35990 acriflavine resistance protein A; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 865790 10211793 Rahaq_0809 Rahnella sp. Y9602 RND family efflux transporter MFP subunit YP_004211561.1 864621 R 741091 CDS YP_004211562.1 322831535 10211794 866373..867974 1 NC_015061.1 KEGG: ebi:EbC_23460 PTS system, maltose and glucose-specific IIbc component; TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; PTS system glucose-like transporter subunit IIB 867974 10211794 Rahaq_0810 Rahnella sp. Y9602 PTS system glucose-like transporter subunit IIB YP_004211562.1 866373 D 741091 CDS YP_004211563.1 322831536 10211795 complement(867981..868721) 1 NC_015061.1 KEGG: eat:EAT1b_2257 phophonate C-P lyase system transcriptional regulator PhnF, GntR family; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 868721 10211795 Rahaq_0811 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004211563.1 867981 R 741091 CDS YP_004211564.1 322831537 10211796 complement(868905..870659) 1 NC_015061.1 KEGG: spe:Spro_3843 ABC transporter; PFAM: ABC transporter; ABC transporter related; SMART: AAA ATPase; ABC transporter 870659 10211796 Rahaq_0812 Rahnella sp. Y9602 ABC transporter YP_004211564.1 868905 R 741091 CDS YP_004211565.1 322831538 10211797 870789..871505 1 NC_015061.1 KEGG: spe:Spro_3842 hypothetical protein; hypothetical protein 871505 10211797 Rahaq_0813 Rahnella sp. Y9602 hypothetical protein YP_004211565.1 870789 D 741091 CDS YP_004211566.1 322831539 10211798 complement(871668..872537) 1 NC_015061.1 KEGG: spe:Spro_3840 beta-lactamase domain-containing protein; beta-lactamase domain-containing protein 872537 10211798 Rahaq_0814 Rahnella sp. Y9602 beta-lactamase domain-containing protein YP_004211566.1 871668 R 741091 CDS YP_004211567.1 322831540 10211799 872653..873570 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pwa:Pecwa_3627 transcriptional regulator, LysR family; LysR family transcriptional regulator 873570 10211799 Rahaq_0815 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004211567.1 872653 D 741091 CDS YP_004211568.1 322831541 10211800 873791..874954 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: ypy:YPK_1022 major facilitator transporter; major facilitator superfamily protein 874954 10211800 Rahaq_0816 Rahnella sp. Y9602 major facilitator superfamily protein YP_004211568.1 873791 D 741091 CDS YP_004211569.1 322831542 10211801 complement(875019..875942) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3837 DNA-binding transcriptional regulator LysR; LysR family transcriptional regulator 875942 10211801 Rahaq_0817 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004211569.1 875019 R 741091 CDS YP_004211570.1 322831543 10211802 876077..877336 1 NC_015061.1 KEGG: spe:Spro_3836 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; diaminopimelate decarboxylase 877336 10211802 Rahaq_0818 Rahnella sp. Y9602 diaminopimelate decarboxylase YP_004211570.1 876077 D 741091 CDS YP_004211571.1 322831544 10211803 complement(877501..877818) 1 NC_015061.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: dda:Dd703_0755 phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; phosphotransferase system PTS lactose/cellobiose-specific IIA subunit 877818 10211803 Rahaq_0819 Rahnella sp. Y9602 phosphotransferase system PTS lactose/cellobiose-specific IIA subunit YP_004211571.1 877501 R 741091 CDS YP_004211572.1 322831545 10211804 878096..879439 1 NC_015061.1 TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; KEGG: eca:ECA3647 PTS system, lichenan-specific IIC component; PFAM: phosphotransferase system EIIC; PTS system lactose/cellobiose family transporter subunit IIC 879439 10211804 Rahaq_0820 Rahnella sp. Y9602 PTS system lactose/cellobiose family transporter subunit IIC YP_004211572.1 878096 D 741091 CDS YP_004211573.1 322831546 10211805 879464..880900 1 NC_015061.1 PFAM: glycoside hydrolase family 1; KEGG: dze:Dd1591_0737 glycoside hydrolase family 1; glycoside hydrolase 880900 10211805 Rahaq_0821 Rahnella sp. Y9602 glycoside hydrolase YP_004211573.1 879464 D 741091 CDS YP_004211574.1 322831547 10211806 880915..881232 1 NC_015061.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: ddc:Dd586_3406 phosphotransferase system lactose/cellobiose-specific IIB subunit; PTS system lactose/cellobiose-specific transporter subunit IIB 881232 10211806 Rahaq_0822 Rahnella sp. Y9602 PTS system lactose/cellobiose-specific transporter subunit IIB YP_004211574.1 880915 D 741091 CDS YP_004211575.1 322831548 10211807 881271..882044 1 NC_015061.1 KEGG: ebi:EbC_36060 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 882044 10211807 Rahaq_0823 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004211575.1 881271 D 741091 CDS YP_004211576.1 322831549 10211808 882050..882499 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_3833 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 882499 10211808 Rahaq_0824 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004211576.1 882050 D 741091 CDS YP_004211577.1 322831550 10211809 complement(882496..883503) 1 NC_015061.1 KEGG: ypb:YPTS_3166 DNA-binding transcriptional regulator GalR; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator 883503 10211809 Rahaq_0825 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004211577.1 882496 R 741091 CDS YP_004211578.1 322831551 10211810 883756..886014 1 NC_015061.1 KEGG: spe:Spro_3831 molybdopterin oxidoreductase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; trimethylamine-N-oxide reductase (cytochrome c) 886014 10211810 Rahaq_0826 Rahnella sp. Y9602 trimethylamine-N-oxide reductase (cytochrome c) YP_004211578.1 883756 D 741091 CDS YP_004211579.1 322831552 10211811 886372..888537 1 NC_015061.1 KEGG: ypb:YPTS_3164 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; AMP-dependent synthetase/ligase 888537 10211811 Rahaq_0827 Rahnella sp. Y9602 AMP-dependent synthetase/ligase YP_004211579.1 886372 D 741091 CDS YP_004211580.1 322831553 10211812 888534..889745 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: ypb:YPTS_3163 lysophospholipid transporter LplT; major facilitator superfamily protein 889745 10211812 Rahaq_0828 Rahnella sp. Y9602 major facilitator superfamily protein YP_004211580.1 888534 D 741091 CDS YP_004211581.1 322831554 10211813 complement(889808..890848) 1 NC_015061.1 PFAM: aldo/keto reductase; KEGG: pct:PC1_0899 aldo-keto reductase; aldo/keto reductase 890848 10211813 Rahaq_0829 Rahnella sp. Y9602 aldo/keto reductase YP_004211581.1 889808 R 741091 CDS YP_004211582.1 322831555 10211814 complement(891033..891254) 1 NC_015061.1 PFAM: protein of unknown function DUF903; KEGG: spe:Spro_3827 hypothetical protein; hypothetical protein 891254 10211814 Rahaq_0830 Rahnella sp. Y9602 hypothetical protein YP_004211582.1 891033 R 741091 CDS YP_004211583.1 322831556 10211815 complement(891338..892024) 1 NC_015061.1 KEGG: dda:Dd703_3019 DNA mismatch repair protein; TIGRFAM: DNA mismatch repair endonuclease mutH; PFAM: DNA mismatch repair protein MutH, conserved region; DNA mismatch repair endonuclease mutH 892024 10211815 Rahaq_0831 Rahnella sp. Y9602 DNA mismatch repair endonuclease mutH YP_004211583.1 891338 R 741091 CDS YP_004211584.1 322831557 10211816 892720..893247 1 NC_015061.1 KEGG: spe:Spro_3824 dinucleoside polyphosphate hydrolase; manually curated; PFAM: NUDIX hydrolase; NUDIX hydrolase 893247 10211816 Rahaq_0832 Rahnella sp. Y9602 NUDIX hydrolase YP_004211584.1 892720 D 741091 CDS YP_004211585.1 322831558 10211817 893259..895505 1 NC_015061.1 SMART: GAF domain protein; manually curated; KEGG: spe:Spro_3823 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; GAF domain protein; PEP-utilising protein mobile region; protein PtsP 895505 10211817 Rahaq_0833 Rahnella sp. Y9602 protein PtsP YP_004211585.1 893259 D 741091 CDS YP_004211586.1 322831559 10211818 895688..896557 1 NC_015061.1 KEGG: spe:Spro_3822 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 896557 10211818 Rahaq_0834 Rahnella sp. Y9602 prolipoprotein diacylglyceryl transferase YP_004211586.1 895688 D 741091 CDS YP_004211587.1 322831560 10211819 896564..897358 1 NC_015061.1 TIGRFAM: thymidylate synthase; KEGG: spe:Spro_3821 thymidylate synthase; PFAM: thymidylate synthase; thymidylate synthase 897358 10211819 Rahaq_0835 Rahnella sp. Y9602 thymidylate synthase YP_004211587.1 896564 D 741091 CDS YP_004211588.1 322831561 10211820 897640..898101 1 NC_015061.1 KEGG: spe:Spro_3820 hypothetical protein; hypothetical protein 898101 10211820 Rahaq_0836 Rahnella sp. Y9602 hypothetical protein YP_004211588.1 897640 D 741091 CDS YP_004211589.1 322831562 10211821 898092..898679 1 NC_015061.1 KEGG: pwa:Pecwa_3394 hypothetical protein; hypothetical protein 898679 10211821 Rahaq_0837 Rahnella sp. Y9602 hypothetical protein YP_004211589.1 898092 D 741091 CDS YP_004211590.1 322831563 10211822 898724..899161 1 NC_015061.1 PFAM: Protein of unknown function DUF2509; KEGG: pwa:Pecwa_3393 protein of unknown function DUF2509; hypothetical protein 899161 10211822 Rahaq_0838 Rahnella sp. Y9602 hypothetical protein YP_004211590.1 898724 D 741091 CDS YP_004211591.1 322831564 10211823 899154..899498 1 NC_015061.1 KEGG: spe:Spro_3817 prepilin peptidase dependent protein c precursor; prepilin peptidase dependent protein c 899498 10211823 Rahaq_0839 Rahnella sp. Y9602 prepilin peptidase dependent protein c YP_004211591.1 899154 D 741091 CDS YP_004211592.1 322831565 10211824 899801..902686 1 NC_015061.1 PFAM: peptidase M16 domain protein; KEGG: spe:Spro_3815 peptidase M16 domain-containing protein; peptidase M16 domain-containing protein 902686 10211824 Rahaq_0840 Rahnella sp. Y9602 peptidase M16 domain-containing protein YP_004211592.1 899801 D 741091 CDS YP_004211593.1 322831566 10211825 complement(902763..904088) 1 NC_015061.1 KEGG: ypb:YPTS_3145 N-acetylglutamate synthase; TIGRFAM: amino-acid N-acetyltransferase; PFAM: aspartate/glutamate/uridylate kinase; GCN5-related N-acetyltransferase; amino-acid N-acetyltransferase 904088 10211825 Rahaq_0841 Rahnella sp. Y9602 amino-acid N-acetyltransferase YP_004211593.1 902763 R 741091 CDS YP_004211594.1 322831567 10211826 904317..905567 1 NC_015061.1 KEGG: yen:YE3307 N-acetylmuramoyl-L-alanine amidase AmiC precursor; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; cell wall hydrolase/autolysin 905567 10211826 Rahaq_0842 Rahnella sp. Y9602 cell wall hydrolase/autolysin YP_004211594.1 904317 D 741091 CDS YP_004211595.1 322831568 10211829 906103..907215 1 NC_015061.1 PFAM: MltA domain protein; 3D domain-containing protein; KEGG: spe:Spro_3810 murein transglycosylase A; MltA domain-containing protein 907215 10211829 Rahaq_0843 Rahnella sp. Y9602 MltA domain-containing protein YP_004211595.1 906103 D 741091 CDS YP_004211596.1 322831569 10211830 907261..908076 1 NC_015061.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: ypb:YPTS_3142 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein 908076 10211830 Rahaq_0844 Rahnella sp. Y9602 UBA/THIF-type NAD/FAD binding protein YP_004211596.1 907261 D 741091 CDS YP_004211597.1 322831570 10211831 complement(908064..908498) 1 NC_015061.1 KEGG: yen:YE3304 hypothetical protein; TIGRFAM: cysteine desulfurase, sulfur acceptor subunit CsdE; PFAM: Fe-S metabolism associated SufE; cysteine desulfurase, sulfur acceptor subunit CsdE 908498 10211831 Rahaq_0845 Rahnella sp. Y9602 cysteine desulfurase, sulfur acceptor subunit CsdE YP_004211597.1 908064 R 741091 CDS YP_004211598.1 322831571 10211832 complement(908519..909724) 1 NC_015061.1 PFAM: aminotransferase class V; KEGG: spe:Spro_3807 cysteine sulfinate desulfinase; class V aminotransferase 909724 10211832 Rahaq_0846 Rahnella sp. Y9602 class V aminotransferase YP_004211598.1 908519 R 741091 CDS YP_004211599.1 322831572 10211833 909912..910133 1 NC_015061.1 PFAM: protein of unknown function DUF903; KEGG: yen:YE3302 lipoprotein; hypothetical protein 910133 10211833 Rahaq_0847 Rahnella sp. Y9602 hypothetical protein YP_004211599.1 909912 D 741091 CDS YP_004211600.1 322831573 10211834 910618..911538 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3805 DNA-binding transcriptional activator GcvA; LysR family transcriptional regulator 911538 10211834 Rahaq_0848 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004211600.1 910618 D 741091 CDS YP_004211601.1 322831574 10211835 911626..912021 1 NC_015061.1 PFAM: protein of unknown function DUF423; KEGG: ebi:EbC_35660 hypothetical protein; hypothetical protein 912021 10211835 Rahaq_0849 Rahnella sp. Y9602 hypothetical protein YP_004211601.1 911626 D 741091 CDS YP_004211602.1 322831575 10211836 912014..913120 1 NC_015061.1 KEGG: spe:Spro_3803 RNA 2'-O-ribose methyltransferase; RNA 2'-O-ribose methyltransferase 913120 10211836 Rahaq_0850 Rahnella sp. Y9602 RNA 2'-O-ribose methyltransferase YP_004211602.1 912014 D 741091 CDS YP_004211603.1 322831576 10211837 complement(913251..914003) 1 NC_015061.1 KEGG: spe:Spro_3802 exonuclease IX; PFAM: 5'-3' exonuclease, SAM-fold domain; 5'-3' exonuclease, N-terminal resolvase-like domain; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; 5'-3' exonuclease 914003 10211837 Rahaq_0851 Rahnella sp. Y9602 5'-3' exonuclease YP_004211603.1 913251 R 741091 CDS YP_004211604.1 322831577 10211838 complement(914082..915446) 1 NC_015061.1 PFAM: Conserved hypothetical protein CHP00730; KEGG: spe:Spro_3801 hypothetical protein; hypothetical protein 915446 10211838 Rahaq_0852 Rahnella sp. Y9602 hypothetical protein YP_004211604.1 914082 R 741091 CDS YP_004211605.1 322831578 10211839 complement(915617..916462) 1 NC_015061.1 TIGRFAM: 7-cyano-7-deazaguanine reductase; KEGG: yen:YE3295 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; 7-cyano-7-deazaguanine reductase 916462 10211839 Rahaq_0853 Rahnella sp. Y9602 7-cyano-7-deazaguanine reductase YP_004211605.1 915617 R 741091 CDS YP_004211606.1 322831579 10211840 916539..917090 1 NC_015061.1 PFAM: Syd family protein; KEGG: ypb:YPTS_3132 SecY interacting protein Syd; Syd family protein 917090 10211840 Rahaq_0854 Rahnella sp. Y9602 Syd family protein YP_004211606.1 916539 D 741091 CDS YP_004211607.1 322831580 10211841 complement(917749..918987) 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3798 major facilitator transporter; major facilitator superfamily protein 918987 10211841 Rahaq_0855 Rahnella sp. Y9602 major facilitator superfamily protein YP_004211607.1 917749 R 741091 CDS YP_004211608.1 322831581 10211842 919178..919492 1 NC_015061.1 PFAM: protein of unknown function DUF446; KEGG: yen:YE3291 hypothetical protein; hypothetical protein 919492 10211842 Rahaq_0856 Rahnella sp. Y9602 hypothetical protein YP_004211608.1 919178 D 741091 CDS YP_004211609.1 322831582 10211843 919494..920273 1 NC_015061.1 PFAM: pseudouridine synthase; KEGG: yen:YE3290 tRNA pseudouridine synthase C; pseudouridine synthase 920273 10211843 Rahaq_0857 Rahnella sp. Y9602 pseudouridine synthase YP_004211609.1 919494 D 741091 CDS YP_004211610.1 322831583 10211844 920316..920765 1 NC_015061.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: spe:Spro_3795 flavodoxin; flavodoxin/nitric oxide synthase 920765 10211844 Rahaq_0858 Rahnella sp. Y9602 flavodoxin/nitric oxide synthase YP_004211610.1 920316 D 741091 CDS YP_004211611.1 322831584 10211845 complement(920858..921247) 1 NC_015061.1 KEGG: spe:Spro_3794 hypothetical protein; hypothetical protein 921247 10211845 Rahaq_0859 Rahnella sp. Y9602 hypothetical protein YP_004211611.1 920858 R 741091 CDS YP_004211612.1 322831585 10211846 complement(921392..922216) 1 NC_015061.1 TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; KEGG: seh:SeHA_C0250 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 922216 10211846 Rahaq_0860 Rahnella sp. Y9602 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_004211612.1 921392 R 741091 CDS YP_004211613.1 322831586 10211847 complement(922263..924953) 1 NC_015061.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: protein-P-II uridylyltransferase; KEGG: spe:Spro_3792 PII uridylyl-transferase; PFAM: GlnD PII-uridylyltransferase; DNA polymerase beta domain protein region; metal-dependent phosphohydrolase HD sub domain; amino acid-binding ACT domain protein; UTP-GlnB uridylyltransferase, GlnD 924953 10211847 Rahaq_0861 Rahnella sp. Y9602 UTP-GlnB uridylyltransferase, GlnD YP_004211613.1 922263 R 741091 CDS YP_004211614.1 322831587 10211848 complement(925063..925854) 1 NC_015061.1 TIGRFAM: methionine aminopeptidase, type I; KEGG: spe:Spro_3791 methionine aminopeptidase; PFAM: peptidase M24; methionine aminopeptidase 925854 10211848 Rahaq_0862 Rahnella sp. Y9602 methionine aminopeptidase YP_004211614.1 925063 R 741091 CDS YP_004211615.1 322831588 10211849 926222..926947 1 NC_015061.1 KEGG: ent:Ent638_0707 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; 30S ribosomal protein S2 926947 10211849 Rahaq_0863 Rahnella sp. Y9602 30S ribosomal protein S2 YP_004211615.1 926222 D 741091 CDS YP_004211616.1 322831589 10211850 927095..927946 1 NC_015061.1 KEGG: spe:Spro_3789 elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein; translation elongation factor Ts 927946 10211850 Rahaq_0864 Rahnella sp. Y9602 translation elongation factor Ts YP_004211616.1 927095 D 741091 CDS YP_004211617.1 322831590 10211851 928107..928838 1 NC_015061.1 KEGG: ypb:YPTS_3121 uridylate kinase; TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; uridylate kinase 928838 10211851 Rahaq_0865 Rahnella sp. Y9602 uridylate kinase YP_004211617.1 928107 D 741091 CDS YP_004211618.1 322831591 10211852 928947..929504 1 NC_015061.1 KEGG: ebi:EbC_08130 ribosome recycling factor; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor; ribosome recycling factor 929504 10211852 Rahaq_0866 Rahnella sp. Y9602 ribosome recycling factor YP_004211618.1 928947 D 741091 CDS YP_004211619.1 322831592 10211853 929663..930859 1 NC_015061.1 TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: spe:Spro_3786 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain-containing protein; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 930859 10211853 Rahaq_0867 Rahnella sp. Y9602 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_004211619.1 929663 D 741091 CDS YP_004211620.1 322831593 10211854 931149..931907 1 NC_015061.1 TIGRFAM: undecaprenyl diphosphate synthase; KEGG: spe:Spro_3785 undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase 931907 10211854 Rahaq_0868 Rahnella sp. Y9602 undecaprenyl diphosphate synthase YP_004211620.1 931149 D 741091 CDS YP_004211621.1 322831594 10211855 931917..932765 1 NC_015061.1 PFAM: phosphatidate cytidylyltransferase; KEGG: spe:Spro_3784 CDP-diglyceride synthase; phosphatidate cytidylyltransferase 932765 10211855 Rahaq_0869 Rahnella sp. Y9602 phosphatidate cytidylyltransferase YP_004211621.1 931917 D 741091 CDS YP_004211622.1 322831595 10211856 932808..934163 1 NC_015061.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: yen:YE3277 zinc metallopeptidase RseP; SMART: PDZ/DHR/GLGF domain protein; membrane-associated zinc metalloprotease 934163 10211856 Rahaq_0870 Rahnella sp. Y9602 membrane-associated zinc metalloprotease YP_004211622.1 932808 D 741091 CDS YP_004211623.1 322831596 10211857 934200..936620 1 NC_015061.1 KEGG: pct:PC1_0949 outer membrane protein assembly factor YaeT; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; outer membrane protein assembly complex, YaeT protein 936620 10211857 Rahaq_0871 Rahnella sp. Y9602 outer membrane protein assembly complex, YaeT protein YP_004211623.1 934200 D 741091 CDS YP_004211624.1 322831597 10211858 936773..937270 1 NC_015061.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: spe:Spro_3781 periplasmic chaperone; outer membrane chaperone Skp 937270 10211858 Rahaq_0872 Rahnella sp. Y9602 outer membrane chaperone Skp YP_004211624.1 936773 D 741091 CDS YP_004211625.1 322831598 10211859 937273..938295 1 NC_015061.1 KEGG: yen:YE3274 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 938295 10211859 Rahaq_0873 Rahnella sp. Y9602 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase YP_004211625.1 937273 D 741091 CDS YP_004211626.1 322831599 10211860 938443..938898 1 NC_015061.1 KEGG: pct:PC1_0952 (3R)-hydroxymyristoyl-ACP dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 938898 10211860 Rahaq_0874 Rahnella sp. Y9602 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ YP_004211626.1 938443 D 741091 CDS YP_004211627.1 322831600 10211861 938902..939690 1 NC_015061.1 TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: pwa:Pecwa_3348 UDP-N-acetylglucosamine acyltransferase; PFAM: transferase hexapeptide repeat containing protein; acyl-ACP-UDP-N- acetylglucosamine O-acyltransferase 939690 10211861 Rahaq_0875 Rahnella sp. Y9602 acyl-ACP-UDP-N- acetylglucosamine O-acyltransferase YP_004211627.1 938902 D 741091 CDS YP_004211628.1 322831601 10211862 939709..940857 1 NC_015061.1 TIGRFAM: lipid-A-disaccharide synthase; KEGG: spe:Spro_3777 lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19; lipid-A-disaccharide synthase 940857 10211862 Rahaq_0876 Rahnella sp. Y9602 lipid-A-disaccharide synthase YP_004211628.1 939709 D 741091 CDS YP_004211629.1 322831602 10211863 940854..941450 1 NC_015061.1 KEGG: dda:Dd703_2966 ribonuclease HII; PFAM: ribonuclease HII/HIII; Ribonuclease H 941450 10211863 Rahaq_0877 Rahnella sp. Y9602 Ribonuclease H YP_004211629.1 940854 D 741091 CDS YP_004211630.1 322831603 10211864 941534..945016 1 NC_015061.1 SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, subunit alpha; KEGG: spe:Spro_3775 DNA polymerase III subunit alpha; PFAM: DNA polymerase III subunit alpha; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III subunit alpha 945016 10211864 Rahaq_0878 Rahnella sp. Y9602 DNA polymerase III subunit alpha YP_004211630.1 941534 D 741091 CDS YP_004211631.1 322831604 10211865 945029..945988 1 NC_015061.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, subunit alpha; KEGG: spe:Spro_3774 acetyl-CoA carboxylase carboxyltransferase subunit alpha; PFAM: Acetyl-CoA carboxylase, subunit alpha, conserved region; acetyl-CoA carboxylase, carboxyl transferase, subunit alpha 945988 10211865 Rahaq_0879 Rahnella sp. Y9602 acetyl-CoA carboxylase, carboxyl transferase, subunit alpha YP_004211631.1 945029 D 741091 CDS YP_004211632.1 322831605 10211866 946178..948325 1 NC_015061.1 KEGG: spe:Spro_3773 lysine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; lysine decarboxylase 948325 10211866 Rahaq_0880 Rahnella sp. Y9602 lysine decarboxylase YP_004211632.1 946178 D 741091 CDS YP_004211633.1 322831606 10211867 948355..948801 1 NC_015061.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: spe:Spro_3770 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase 948801 10211867 Rahaq_0881 Rahnella sp. Y9602 Glyoxalase/bleomycin resistance protein/dioxygenase YP_004211633.1 948355 D 741091 CDS YP_004211634.1 322831607 10211868 948809..950152 1 NC_015061.1 KEGG: spe:Spro_3765 tRNA(Ile)-lysidine synthetase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: Protein of unkown function DUF1946 PP-loop ATpase; PP-loop domain protein; tRNA(Ile)-lysidine synthetase 950152 10211868 Rahaq_0882 Rahnella sp. Y9602 tRNA(Ile)-lysidine synthetase YP_004211634.1 948809 D 741091 CDS YP_004211635.1 322831608 10211869 950207..950536 1 NC_015061.1 PFAM: cytochrome c class I; KEGG: spe:Spro_3764 cytochrome c class I; cytochrome c class I 950536 10211869 Rahaq_0883 Rahnella sp. Y9602 cytochrome c class I YP_004211635.1 950207 D 741091 CDS YP_004211636.1 322831609 10211870 complement(950603..950863) 1 NC_015061.1 PFAM: Modulator of Rho-dependent transcription termination; KEGG: yen:YE3263 Rho-binding antiterminator; transcriptional antiterminator Rof 950863 10211870 Rahaq_0884 Rahnella sp. Y9602 transcriptional antiterminator Rof YP_004211636.1 950603 R 741091 CDS YP_004211637.1 322831610 10211871 complement(950850..951050) 1 NC_015061.1 PFAM: protein of unknown function UPF0253; KEGG: spe:Spro_3762 hypothetical protein; hypothetical protein 951050 10211871 Rahaq_0885 Rahnella sp. Y9602 hypothetical protein YP_004211637.1 950850 R 741091 CDS YP_004211638.1 322831611 10211872 951266..951826 1 NC_015061.1 PFAM: YaeQ family protein; KEGG: spe:Spro_3761 YaeQ family protein; YaeQ family protein 951826 10211872 Rahaq_0886 Rahnella sp. Y9602 YaeQ family protein YP_004211638.1 951266 D 741091 CDS YP_004211639.1 322831612 10211873 951832..952242 1 NC_015061.1 PFAM: Class I peptide chain release factor; KEGG: yen:YE3260 peptidyl-tRNA hydrolase domain protein; class I peptide chain release factor 952242 10211873 Rahaq_0887 Rahnella sp. Y9602 class I peptide chain release factor YP_004211639.1 951832 D 741091 CDS YP_004211640.1 322831613 10211874 952308..952985 1 NC_015061.1 KEGG: spe:Spro_3759 lipoprotein involved with copper homeostasis and adhesion; lipoprotein involved with copper homeostasis and adhesion 952985 10211874 Rahaq_0888 Rahnella sp. Y9602 lipoprotein involved with copper homeostasis and adhesion YP_004211640.1 952308 D 741091 CDS YP_004211641.1 322831614 10211875 complement(953072..954790) 1 NC_015061.1 KEGG: yen:YE3258 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon-binding domain protein; prolyl-tRNA synthetase 954790 10211875 Rahaq_0889 Rahnella sp. Y9602 prolyl-tRNA synthetase YP_004211641.1 953072 R 741091 CDS YP_004211642.1 322831615 10211876 complement(954909..955616) 1 NC_015061.1 PFAM: Uncharacterised protein family UPF0066; KEGG: spe:Spro_3757 hypothetical protein; hypothetical protein 955616 10211876 Rahaq_0890 Rahnella sp. Y9602 hypothetical protein YP_004211642.1 954909 R 741091 CDS YP_004211643.1 322831616 10211877 complement(955613..956020) 1 NC_015061.1 KEGG: yen:YE3256 outer membrane lipoprotein; outer membrane lipoprotein 956020 10211877 Rahaq_0891 Rahnella sp. Y9602 outer membrane lipoprotein YP_004211643.1 955613 R 741091 CDS YP_004211644.1 322831617 10211878 complement(956207..957022) 1 NC_015061.1 KEGG: spe:Spro_3755 DL-methionine transporter substrate-binding subunit; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; lipoprotein 957022 10211878 Rahaq_0892 Rahnella sp. Y9602 lipoprotein YP_004211644.1 956207 R 741091 CDS YP_004211645.1 322831618 10211879 complement(957084..957737) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3754 DL-methionine transporter permease subunit; binding-protein-dependent transport system inner membrane protein 957737 10211879 Rahaq_0893 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004211645.1 957084 R 741091 CDS YP_004211646.1 322831619 10211880 complement(957730..958761) 1 NC_015061.1 TIGRFAM: D-methionine ABC transporter ATPase subunit; PFAM: ABC transporter related; NIL domain; KEGG: spe:Spro_3753 DL-methionine transporter ATP-binding subunit; SMART: AAA ATPase; D-methionine ABC transporter ATPase 958761 10211880 Rahaq_0894 Rahnella sp. Y9602 D-methionine ABC transporter ATPase YP_004211646.1 957730 R 741091 CDS YP_004211647.1 322831620 10211881 958941..959507 1 NC_015061.1 KEGG: ecz:ECS88_0212 D,D-heptose 1,7-bisphosphate phosphatase; TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase; D,D-heptose 1,7-bisphosphate phosphatase 959507 10211881 Rahaq_0895 Rahnella sp. Y9602 D,D-heptose 1,7-bisphosphate phosphatase YP_004211647.1 958941 D 741091 CDS YP_004211648.1 322831621 10211887 965627..966352 1 NC_015061.1 KEGG: yen:YE0896 hypothetical protein; hypothetical protein 966352 10211887 Rahaq_0896 Rahnella sp. Y9602 hypothetical protein YP_004211648.1 965627 D 741091 CDS YP_004211649.1 322831622 10211888 966352..967164 1 NC_015061.1 manually curated; PFAM: phospholipid/glycerol acyltransferase; KEGG: spe:Spro_0889 phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 967164 10211888 Rahaq_0897 Rahnella sp. Y9602 phospholipid/glycerol acyltransferase YP_004211649.1 966352 D 741091 CDS YP_004211650.1 322831623 10211889 967168..967425 1 NC_015061.1 KEGG: spe:Spro_0890 acyl carrier protein; acyl carrier protein 967425 10211889 Rahaq_0898 Rahnella sp. Y9602 acyl carrier protein YP_004211650.1 967168 D 741091 CDS YP_004211651.1 322831624 10211890 967436..967690 1 NC_015061.1 PFAM: phosphopantetheine-binding; KEGG: spe:Spro_0891 acyl carrier protein; phosphopantetheine-binding protein 967690 10211890 Rahaq_0899 Rahnella sp. Y9602 phosphopantetheine-binding protein YP_004211651.1 967436 D 741091 CDS YP_004211652.1 322831625 10211891 967696..968301 1 NC_015061.1 KEGG: spe:Spro_0892 inner membrane protein; inner membrane protein 968301 10211891 Rahaq_0900 Rahnella sp. Y9602 inner membrane protein YP_004211652.1 967696 D 741091 CDS YP_004211653.1 322831626 10211892 968298..969647 1 NC_015061.1 PFAM: AMP-dependent synthetase and ligase; KEGG: spe:Spro_0893 AMP-binding protein; AMP-dependent synthetase/ligase 969647 10211892 Rahaq_0901 Rahnella sp. Y9602 AMP-dependent synthetase/ligase YP_004211653.1 968298 D 741091 CDS YP_004211654.1 322831627 10211893 969644..969988 1 NC_015061.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: spe:Spro_0894 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 969988 10211893 Rahaq_0902 Rahnella sp. Y9602 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_004211654.1 969644 D 741091 CDS YP_004211655.1 322831628 10211894 969988..971700 1 NC_015061.1 PFAM: glycosyl transferase family 2; KEGG: spe:Spro_0895 glycosyl transferase family protein; family 2 glycosyl transferase 971700 10211894 Rahaq_0903 Rahnella sp. Y9602 family 2 glycosyl transferase YP_004211655.1 969988 D 741091 CDS YP_004211656.1 322831629 10211895 971702..972145 1 NC_015061.1 PFAM: thioesterase superfamily protein; KEGG: enc:ECL_04848 thioesterase superfamily protein; thioesterase superfamily protein 972145 10211895 Rahaq_0904 Rahnella sp. Y9602 thioesterase superfamily protein YP_004211656.1 971702 D 741091 CDS YP_004211657.1 322831630 10211896 972142..972747 1 NC_015061.1 KEGG: spe:Spro_0897 outer-membrane lipoprotein carrier protein; outer-membrane lipoprotein carrier protein 972747 10211896 Rahaq_0905 Rahnella sp. Y9602 outer-membrane lipoprotein carrier protein YP_004211657.1 972142 D 741091 CDS YP_004211658.1 322831631 10211897 972737..975043 1 NC_015061.1 KEGG: spe:Spro_0898 inner membrane protein; inner membrane protein 975043 10211897 Rahaq_0906 Rahnella sp. Y9602 inner membrane protein YP_004211658.1 972737 D 741091 CDS YP_004211659.1 322831632 10211898 975040..975615 1 NC_015061.1 KEGG: spe:Spro_0899 lipoprotein; lipoprotein 975615 10211898 Rahaq_0907 Rahnella sp. Y9602 lipoprotein YP_004211659.1 975040 D 741091 CDS YP_004211660.1 322831633 10211899 975617..976789 1 NC_015061.1 PFAM: Beta-ketoacyl synthase; KEGG: spe:Spro_0900 3-oxoacyl-(acyl carrier protein) synthase I; Beta-ketoacyl synthase 976789 10211899 Rahaq_0908 Rahnella sp. Y9602 Beta-ketoacyl synthase YP_004211660.1 975617 D 741091 CDS YP_004211661.1 322831634 10211900 976786..977265 1 NC_015061.1 KEGG: spe:Spro_0901 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 977265 10211900 Rahaq_0909 Rahnella sp. Y9602 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_004211661.1 976786 D 741091 CDS YP_004211662.1 322831635 10211901 977262..977993 1 NC_015061.1 KEGG: spe:Spro_0902 3-ketoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 977993 10211901 Rahaq_0910 Rahnella sp. Y9602 3-oxoacyl-ACP reductase YP_004211662.1 977262 D 741091 CDS YP_004211663.1 322831636 10211902 977990..979219 1 NC_015061.1 PFAM: Beta-ketoacyl synthase; KEGG: spe:Spro_0903 3-oxoacyl-(acyl carrier protein) synthase II; Beta-ketoacyl synthase 979219 10211902 Rahaq_0911 Rahnella sp. Y9602 Beta-ketoacyl synthase YP_004211663.1 977990 D 741091 CDS YP_004211664.1 322831637 10211903 979222..979908 1 NC_015061.1 KEGG: ent:Ent638_3900 holo-(acyl carrier protein) synthase 2; hypothetical protein 979908 10211903 Rahaq_0912 Rahnella sp. Y9602 hypothetical protein YP_004211664.1 979222 D 741091 CDS YP_004211665.1 322831638 10211904 980022..980825 1 NC_015061.1 PFAM: aldo/keto reductase; KEGG: spe:Spro_0904 2,5-diketo-D-gluconate reductase B; aldo/keto reductase 980825 10211904 Rahaq_0913 Rahnella sp. Y9602 aldo/keto reductase YP_004211665.1 980022 D 741091 CDS YP_004211666.1 322831639 10211905 complement(980866..981762) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_0905 LysR family transcriptional regulator; LysR family transcriptional regulator 981762 10211905 Rahaq_0914 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004211666.1 980866 R 741091 CDS YP_004211667.1 322831640 10211906 981869..983044 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_0906 major facilitator transporter; major facilitator superfamily protein 983044 10211906 Rahaq_0915 Rahnella sp. Y9602 major facilitator superfamily protein YP_004211667.1 981869 D 741091 CDS YP_004211668.1 322831641 10211907 983239..984039 1 NC_015061.1 KEGG: ctu:Ctu_08330 hypothetical protein; manually curated; PFAM: Endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 984039 10211907 Rahaq_0916 Rahnella sp. Y9602 endonuclease/exonuclease/phosphatase YP_004211668.1 983239 D 741091 CDS YP_004211669.1 322831642 10211908 complement(984126..985514) 1 NC_015061.1 KEGG: pct:PC1_3139 membrane-bound lytic murein transglycosylase D; PFAM: lytic transglycosylase catalytic; MLTD_N domain protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; lytic transglycosylase 985514 10211908 Rahaq_0917 Rahnella sp. Y9602 lytic transglycosylase YP_004211669.1 984126 R 741091 CDS YP_004211670.1 322831643 10211909 complement(985584..986339) 1 NC_015061.1 TIGRFAM: hydroxyacylglutathione hydrolase; KEGG: spe:Spro_0909 hydroxyacylglutathione hydrolase; hydroxyacylglutathione hydrolase 986339 10211909 Rahaq_0918 Rahnella sp. Y9602 hydroxyacylglutathione hydrolase YP_004211670.1 985584 R 741091 CDS YP_004211671.1 322831644 10211910 986383..987108 1 NC_015061.1 PFAM: methyltransferase type 11; KEGG: spe:Spro_0910 methyltransferase type 11; type 11 methyltransferase 987108 10211910 Rahaq_0919 Rahnella sp. Y9602 type 11 methyltransferase YP_004211671.1 986383 D 741091 CDS YP_004211672.1 322831645 10211911 complement(987169..987636) 1 NC_015061.1 KEGG: spe:Spro_0911 ribonuclease H; PFAM: ribonuclease H; Ribonuclease H 987636 10211911 Rahaq_0920 Rahnella sp. Y9602 Ribonuclease H YP_004211672.1 987169 R 741091 CDS YP_004211673.1 322831646 10211912 987897..988781 1 NC_015061.1 KEGG: eca:ECA4274 carbon-nitrogen hydrolase; TIGRFAM: N-carbamoylputrescine amidase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; N-carbamoylputrescine amidase 988781 10211912 Rahaq_0921 Rahnella sp. Y9602 N-carbamoylputrescine amidase YP_004211673.1 987897 D 741091 CDS YP_004211674.1 322831647 10211913 988785..989870 1 NC_015061.1 TIGRFAM: agmatine deiminase; KEGG: pwa:Pecwa_0168 agmatine deiminase; PFAM: Porphyromonas-type peptidyl-arginine deiminase; agmatine deiminase 989870 10211913 Rahaq_0922 Rahnella sp. Y9602 agmatine deiminase YP_004211674.1 988785 D 741091 CDS YP_004211675.1 322831648 10211914 989952..990689 1 NC_015061.1 SMART: Exonuclease; TIGRFAM: DNA polymerase III, subunit epsilon; KEGG: eca:ECA3339 DNA polymerase III subunit epsilon; PFAM: Exonuclease RNase T and DNA polymerase III; DNA polymerase III subunit epsilon 990689 10211914 Rahaq_0923 Rahnella sp. Y9602 DNA polymerase III subunit epsilon YP_004211675.1 989952 D 741091 CDS YP_004211676.1 322831649 10211916 complement(990977..992479) 1 NC_015061.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: dda:Dd703_0898 permease for cytosine/purines uracil thiamine allantoin; cytosine/purines uracil thiamine allantoin permease 992479 10211916 Rahaq_0924 Rahnella sp. Y9602 cytosine/purines uracil thiamine allantoin permease YP_004211676.1 990977 R 741091 CDS YP_004211677.1 322831650 10211917 992657..993391 1 NC_015061.1 KEGG: ddd:Dda3937_00905 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 993391 10211917 Rahaq_0925 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004211677.1 992657 D 741091 CDS YP_004211678.1 322831651 10211918 993391..994149 1 NC_015061.1 KEGG: spe:Spro_0915 Asp/Glu racemase; PFAM: Asp/Glu/hydantoin racemase; hydantoin racemase 994149 10211918 Rahaq_0926 Rahnella sp. Y9602 hydantoin racemase YP_004211678.1 993391 D 741091 CDS YP_004211679.1 322831652 10211919 994142..995080 1 NC_015061.1 TIGRFAM: urate catabolism protein; KEGG: spe:Spro_0916 chitin deacetylase; PFAM: polysaccharide deacetylase; urate catabolism protein 995080 10211919 Rahaq_0927 Rahnella sp. Y9602 urate catabolism protein YP_004211679.1 994142 D 741091 CDS YP_004211680.1 322831653 10211920 complement(995707..996090) 1 NC_015061.1 KEGG: spe:Spro_0927 hypothetical protein; hypothetical protein 996090 10211920 Rahaq_0928 Rahnella sp. Y9602 hypothetical protein YP_004211680.1 995707 R 741091 CDS YP_004211681.1 322831654 10211921 complement(996145..997548) 1 NC_015061.1 KEGG: ypy:YPK_3332 amidase; TIGRFAM: amidohydrolase, AtzE family; PFAM: Amidase; amidohydrolase 997548 10211921 Rahaq_0929 Rahnella sp. Y9602 amidohydrolase YP_004211681.1 996145 R 741091 CDS YP_004211682.1 322831655 10211922 complement(997545..997739) 1 NC_015061.1 KEGG: spe:Spro_0929 hypothetical protein; hypothetical protein 997739 10211922 Rahaq_0930 Rahnella sp. Y9602 hypothetical protein YP_004211682.1 997545 R 741091 CDS YP_004211683.1 322831656 10211923 complement(997776..999362) 1 NC_015061.1 TIGRFAM: gamma-glutamyltransferase; KEGG: spe:Spro_0930 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 999362 10211923 Rahaq_0931 Rahnella sp. Y9602 gamma-glutamyltransferase YP_004211683.1 997776 R 741091 CDS YP_004211684.1 322831657 10211924 999561..1000400 1 NC_015061.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: spe:Spro_0931 RpiR family transcriptional regulator; RpiR family transcriptional regulator 1000400 10211924 Rahaq_0932 Rahnella sp. Y9602 RpiR family transcriptional regulator YP_004211684.1 999561 D 741091 CDS YP_004211685.1 322831658 10211925 1000659..1001450 1 NC_015061.1 KEGG: pam:PANA_0860 FliY; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 1001450 10211925 Rahaq_0933 Rahnella sp. Y9602 family 3 extracellular solute-binding protein YP_004211685.1 1000659 D 741091 CDS YP_004211686.1 322831659 10211926 1001475..1002140 1 NC_015061.1 KEGG: pwa:Pecwa_3468 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 1002140 10211926 Rahaq_0934 Rahnella sp. Y9602 polar amino acid ABC transporter inner membrane subunit YP_004211686.1 1001475 D 741091 CDS YP_004211687.1 322831660 10211927 1002140..1002793 1 NC_015061.1 KEGG: pct:PC1_3311 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 1002793 10211927 Rahaq_0935 Rahnella sp. Y9602 polar amino acid ABC transporter inner membrane subunit YP_004211687.1 1002140 D 741091 CDS YP_004211688.1 322831661 10211928 1002793..1003545 1 NC_015061.1 KEGG: spe:Spro_0935 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1003545 10211928 Rahaq_0936 Rahnella sp. Y9602 ABC transporter YP_004211688.1 1002793 D 741091 CDS YP_004211689.1 322831662 10211929 1003564..1004802 1 NC_015061.1 PFAM: aminotransferase class V; KEGG: spe:Spro_0936 aminotransferase class V; class V aminotransferase 1004802 10211929 Rahaq_0937 Rahnella sp. Y9602 class V aminotransferase YP_004211689.1 1003564 D 741091 CDS YP_004211690.1 322831663 10211930 1004802..1006076 1 NC_015061.1 TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: ypi:YpsIP31758_3185 allantoate amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidase 1006076 10211930 Rahaq_0938 Rahnella sp. Y9602 amidase YP_004211690.1 1004802 D 741091 CDS YP_004211691.1 322831664 10211931 1006073..1006567 1 NC_015061.1 KEGG: ddd:Dda3937_02651 uricase; TIGRFAM: OHCU decarboxylase; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; OHCU decarboxylase 1006567 10211931 Rahaq_0939 Rahnella sp. Y9602 OHCU decarboxylase YP_004211691.1 1006073 D 741091 CDS YP_004211692.1 322831665 10211932 1006567..1006902 1 NC_015061.1 KEGG: spe:Spro_0939 transthyretin; TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; hydroxyisourate hydrolase 1006902 10211932 Rahaq_0940 Rahnella sp. Y9602 hydroxyisourate hydrolase YP_004211692.1 1006567 D 741091 CDS YP_004211693.1 322831666 10211933 complement(1006916..1008184) 1 NC_015061.1 PFAM: glutamine amidotransferase class-I; KEGG: ara:Arad_7095 CTP synthase protein; glutamine amidotransferase 1008184 10211933 Rahaq_0941 Rahnella sp. Y9602 glutamine amidotransferase YP_004211693.1 1006916 R 741091 CDS YP_004211694.1 322831667 10211934 1008398..1008904 1 NC_015061.1 PFAM: Domain of unknown function DUF1993; KEGG: rme:Rmet_1570 hypothetical protein; hypothetical protein 1008904 10211934 Rahaq_0942 Rahnella sp. Y9602 hypothetical protein YP_004211694.1 1008398 D 741091 CDS YP_004211695.1 322831668 10211935 complement(1008957..1009730) 1 NC_015061.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: spe:Spro_0940 hypothetical protein; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1009730 10211935 Rahaq_0943 Rahnella sp. Y9602 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004211695.1 1008957 R 741091 CDS YP_004211696.1 322831669 10211936 complement(1009718..1010878) 1 NC_015061.1 PFAM: aminotransferase class I and II; KEGG: yen:YE3234 aminotransferase; class I and II aminotransferase 1010878 10211936 Rahaq_0944 Rahnella sp. Y9602 class I and II aminotransferase YP_004211696.1 1009718 R 741091 CDS YP_004211697.1 322831670 10211937 1011098..1011712 1 NC_015061.1 KEGG: yen:YE3233 methylthioribulose-1-phosphate dehydratase; TIGRFAM: methylthioribulose-1-phosphate dehydratase; PFAM: class II aldolase/adducin family protein; methylthioribulose-1-phosphate dehydratase 1011712 10211937 Rahaq_0945 Rahnella sp. Y9602 methylthioribulose-1-phosphate dehydratase YP_004211697.1 1011098 D 741091 CDS YP_004211698.1 322831671 10211938 1011709..1012395 1 NC_015061.1 TIGRFAM: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; KEGG: spe:Spro_0943 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 1012395 10211938 Rahaq_0946 Rahnella sp. Y9602 2,3-diketo-5-methylthio-1-phosphopentane phosphatase YP_004211698.1 1011709 D 741091 CDS YP_004211699.1 322831672 10211939 1012407..1012952 1 NC_015061.1 KEGG: spe:Spro_0944 acireductone dioxygenase ARD; PFAM: Acireductone dioxygenase ARD; acireductone dioxygenase 1012952 10211939 Rahaq_0947 Rahnella sp. Y9602 acireductone dioxygenase YP_004211699.1 1012407 D 741091 CDS YP_004211700.1 322831673 10211940 complement(1013029..1014057) 1 NC_015061.1 TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; KEGG: dda:Dd703_0921 translation initiation factor, aIF-2BI family; PFAM: initiation factor 2B related; translation initiation factor, aIF-2BI family 1014057 10211940 Rahaq_0948 Rahnella sp. Y9602 translation initiation factor, aIF-2BI family YP_004211700.1 1013029 R 741091 CDS YP_004211701.1 322831674 10211941 1014175..1015374 1 NC_015061.1 TIGRFAM: 5-methylthioribose kinase; KEGG: yen:YE3228 methylthioribose kinase; PFAM: aminoglycoside phosphotransferase; 5-methylthioribose kinase 1015374 10211941 Rahaq_0949 Rahnella sp. Y9602 5-methylthioribose kinase YP_004211701.1 1014175 D 741091 CDS YP_004211702.1 322831675 10211942 1015470..1015940 1 NC_015061.1 PFAM: protein of unknown function DUF1456; KEGG: pfl:PFL_1244 hypothetical protein; hypothetical protein 1015940 10211942 Rahaq_0950 Rahnella sp. Y9602 hypothetical protein YP_004211702.1 1015470 D 741091 CDS YP_004211703.1 322831676 10211943 1016233..1017630 1 NC_015061.1 KEGG: sea:SeAg_B2933 glycoporin; glycoporin 1017630 10211943 Rahaq_0951 Rahnella sp. Y9602 glycoporin YP_004211703.1 1016233 D 741091 CDS YP_004211704.1 322831677 10211944 complement(1017799..1020267) 1 NC_015061.1 PFAM: protein of unknown function DUF1974; acyl-CoA dehydrogenase domain-containing protein; KEGG: spe:Spro_0949 acyl-CoA dehydrogenase; hypothetical protein 1020267 10211944 Rahaq_0952 Rahnella sp. Y9602 hypothetical protein YP_004211704.1 1017799 R 741091 CDS YP_004211705.1 322831678 10211945 1020537..1021118 1 NC_015061.1 KEGG: spe:Spro_0950 phosphoheptose isomerase; TIGRFAM: phosphoheptose isomerase; PFAM: sugar isomerase (SIS); phosphoheptose isomerase 1021118 10211945 Rahaq_0953 Rahnella sp. Y9602 phosphoheptose isomerase YP_004211705.1 1020537 D 741091 CDS YP_004211706.1 322831679 10211946 1021145..1021912 1 NC_015061.1 PFAM: glutamine amidotransferase class-II; KEGG: spe:Spro_0951 glutamine amidotransferase class-II; glutamine amidotransferase 1021912 10211946 Rahaq_0954 Rahnella sp. Y9602 glutamine amidotransferase YP_004211706.1 1021145 D 741091 CDS YP_004211707.1 322831680 10211947 complement(1021883..1022608) 1 NC_015061.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: yen:YE3221 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 1022608 10211947 Rahaq_0955 Rahnella sp. Y9602 ErfK/YbiS/YcfS/YnhG family protein YP_004211707.1 1021883 R 741091 CDS YP_004211708.1 322831681 10211948 1022892..1023950 1 NC_015061.1 KEGG: spe:Spro_0962 DNA polymerase IV; PFAM: UMUC domain protein DNA-repair protein; DNA-directed DNA polymerase 1023950 10211948 Rahaq_0956 Rahnella sp. Y9602 DNA-directed DNA polymerase YP_004211708.1 1022892 D 741091 CDS YP_004211709.1 322831682 10211949 complement(1024085..1025545) 1 NC_015061.1 TIGRFAM: aminoacyl-histidine dipeptidase; KEGG: yen:YE3206 aminoacyl-histidine dipeptidase; PFAM: peptidase dimerisation domain protein; peptidase M20; aminoacyl-histidine dipeptidase 1025545 10211949 Rahaq_0957 Rahnella sp. Y9602 aminoacyl-histidine dipeptidase YP_004211709.1 1024085 R 741091 CDS YP_004211710.1 322831683 10211950 1025839..1026297 1 NC_015061.1 KEGG: eta:ETA_25980 xanthine-guanine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; xanthine phosphoribosyltransferase 1026297 10211950 Rahaq_0958 Rahnella sp. Y9602 xanthine phosphoribosyltransferase YP_004211710.1 1025839 D 741091 CDS YP_004211711.1 322831684 10211951 1026484..1027734 1 NC_015061.1 KEGG: yen:YE3204 fermentation/respiration switch protein; fermentation/respiration switch protein 1027734 10211951 Rahaq_0959 Rahnella sp. Y9602 fermentation/respiration switch protein YP_004211711.1 1026484 D 741091 CDS YP_004211712.1 322831685 10211952 1027798..1028199 1 NC_015061.1 PFAM: transcriptional regulator Crl; KEGG: yen:YE3203 DNA-binding transcriptional regulator Crl; Crl family transcriptional regulator 1028199 10211952 Rahaq_0960 Rahnella sp. Y9602 Crl family transcriptional regulator YP_004211712.1 1027798 D 741091 CDS YP_004211713.1 322831686 10211953 1028322..1029425 1 NC_015061.1 TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; KEGG: ypb:YPTS_0946 gamma-glutamyl kinase; SMART: PUA domain containing protein; glutamate 5-kinase 1029425 10211953 Rahaq_0961 Rahnella sp. Y9602 glutamate 5-kinase YP_004211713.1 1028322 D 741091 CDS YP_004211714.1 322831687 10211954 1029436..1030689 1 NC_015061.1 TIGRFAM: gamma-glutamyl phosphate reductase; KEGG: yen:YE3201 gamma-glutamyl phosphate reductase; PFAM: Aldehyde Dehydrogenase; gamma-glutamyl phosphate reductase 1030689 10211954 Rahaq_0962 Rahnella sp. Y9602 gamma-glutamyl phosphate reductase YP_004211714.1 1029436 D 741091 CDS YP_004211715.1 322831688 10211955 complement(1030755..1031648) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pol:Bpro_3431 LysR family transcriptional regulator; LysR family transcriptional regulator 1031648 10211955 Rahaq_0963 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004211715.1 1030755 R 741091 CDS YP_004211716.1 322831689 10211956 1031778..1032656 1 NC_015061.1 KEGG: rlt:Rleg2_1027 beta-lactamase domain protein; beta-lactamase 1032656 10211956 Rahaq_0964 Rahnella sp. Y9602 beta-lactamase YP_004211716.1 1031778 D 741091 CDS YP_004211717.1 322831690 10211957 1032670..1033647 1 NC_015061.1 PFAM: alpha/beta hydrolase fold; KEGG: rlt:Rleg2_1028 alpha/beta hydrolase fold; alpha/beta hydrolase 1033647 10211957 Rahaq_0965 Rahnella sp. Y9602 alpha/beta hydrolase YP_004211717.1 1032670 D 741091 CDS YP_004211718.1 322831691 10211960 1034348..1034611 1 NC_015061.1 PFAM: Colicin D; KEGG: ypy:YPK_2802 colicin D; Colicin D 1034611 10211960 Rahaq_0966 Rahnella sp. Y9602 Colicin D YP_004211718.1 1034348 D 741091 CDS YP_004211719.1 322831692 10211961 1034649..1034903 1 NC_015061.1 PFAM: Colicin immunity protein/pyocin immunity protein; KEGG: eoi:ECO111_p4-05 colicin immunity protein; Colicin immunity protein/pyocin immunity protein 1034903 10211961 Rahaq_0967 Rahnella sp. Y9602 Colicin immunity protein/pyocin immunity protein YP_004211719.1 1034649 D 741091 CDS YP_004211720.1 322831693 10211962 complement(1034947..1035225) 1 NC_015061.1 KEGG: ctu:Ctu_00330 hypothetical protein; hypothetical protein 1035225 10211962 Rahaq_0968 Rahnella sp. Y9602 hypothetical protein YP_004211720.1 1034947 R 741091 CDS YP_004211721.1 322831694 10211963 1035583..1036068 1 NC_015061.1 KEGG: ypi:YpsIP31758_B0080 hypothetical protein; hypothetical protein 1036068 10211963 Rahaq_0969 Rahnella sp. Y9602 hypothetical protein YP_004211721.1 1035583 D 741091 CDS YP_004211722.1 322831695 10211964 1036072..1037601 1 NC_015061.1 PFAM: Colicin E3 catalytic; S-type Pyocin domain protein; KEGG: enc:ECL_02217 hypothetical protein; Colicin E3 catalytic 1037601 10211964 Rahaq_0970 Rahnella sp. Y9602 Colicin E3 catalytic YP_004211722.1 1036072 D 741091 CDS YP_004211723.1 322831696 10211965 1037601..1037858 1 NC_015061.1 KEGG: ddi:DDB_G0289121 cAMP-specific phosphodiesterase; hypothetical protein 1037858 10211965 Rahaq_0971 Rahnella sp. Y9602 hypothetical protein YP_004211723.1 1037601 D 741091 CDS YP_004211724.1 322831697 10211966 1037851..1038045 1 NC_015061.1 KEGG: ypb:YPTS_3238 hypothetical protein; hypothetical protein 1038045 10211966 Rahaq_0972 Rahnella sp. Y9602 hypothetical protein YP_004211724.1 1037851 D 741091 CDS YP_004211725.1 322831698 10211968 complement(1038399..1038725) 1 NC_015061.1 PFAM: NIPSNAP family containing protein; KEGG: eci:UTI89_C0287 hypothetical protein; NIPSNAP family containing protein 1038725 10211968 Rahaq_0974 Rahnella sp. Y9602 NIPSNAP family containing protein YP_004211725.1 1038399 R 741091 CDS YP_004211726.1 322831699 10211969 1039046..1039939 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_24020 transcriptional regulator; LysR family transcriptional regulator 1039939 10211969 Rahaq_0975 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004211726.1 1039046 D 741091 CDS YP_004211727.1 322831700 10211970 complement(1039974..1040963) 1 NC_015061.1 PFAM: aldo/keto reductase; KEGG: ecz:ECS88_0298 aldo-keto reductase; aldo/keto reductase 1040963 10211970 Rahaq_0976 Rahnella sp. Y9602 aldo/keto reductase YP_004211727.1 1039974 R 741091 CDS YP_004211728.1 322831701 10211971 complement(1040990..1041841) 1 NC_015061.1 PFAM: aldo/keto reductase; KEGG: efe:EFER_2672 aldo-keto reductase; aldo/keto reductase 1041841 10211971 Rahaq_0977 Rahnella sp. Y9602 aldo/keto reductase YP_004211728.1 1040990 R 741091 CDS YP_004211729.1 322831702 10211972 complement(1042048..1042317) 1 NC_015061.1 KEGG: pam:PANA_1081 hypothetical protein; hypothetical protein 1042317 10211972 Rahaq_0978 Rahnella sp. Y9602 hypothetical protein YP_004211729.1 1042048 R 741091 CDS YP_004211730.1 322831703 10211973 1042871..1043128 1 NC_015061.1 PFAM: protein of unknown function DUF1471; KEGG: spe:Spro_1393 hypothetical protein; hypothetical protein 1043128 10211973 Rahaq_0979 Rahnella sp. Y9602 hypothetical protein YP_004211730.1 1042871 D 741091 CDS YP_004211731.1 322831704 10211974 complement(1043191..1043418) 1 NC_015061.1 KEGG: xac:XAC4351 hypothetical protein; hypothetical protein 1043418 10211974 Rahaq_0980 Rahnella sp. Y9602 hypothetical protein YP_004211731.1 1043191 R 741091 CDS YP_004211732.1 322831705 10211975 1043684..1043917 1 NC_015061.1 KEGG: ent:Ent638_1660 hypothetical protein; manually curated; PFAM: protein of unknown function DUF333; hypothetical protein 1043917 10211975 Rahaq_0981 Rahnella sp. Y9602 hypothetical protein YP_004211732.1 1043684 D 741091 CDS YP_004211733.1 322831706 10211976 1044274..1045431 1 NC_015061.1 TIGRFAM: amidohydrolase; KEGG: ddc:Dd586_2912 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 1045431 10211976 Rahaq_0982 Rahnella sp. Y9602 amidohydrolase YP_004211733.1 1044274 D 741091 CDS YP_004211734.1 322831707 10211977 complement(1045496..1046278) 1 NC_015061.1 KEGG: dze:Dd1591_1334 acetyltransferase; acetyltransferase 1046278 10211977 Rahaq_0983 Rahnella sp. Y9602 acetyltransferase YP_004211734.1 1045496 R 741091 CDS YP_004211735.1 322831708 10211978 complement(1046460..1048247) 1 NC_015061.1 KEGG: yen:YE1405 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer with Cache sensor 1048247 10211978 Rahaq_0984 Rahnella sp. Y9602 methyl-accepting chemotaxis sensory transducer with Cache sensor YP_004211735.1 1046460 R 741091 CDS YP_004211736.1 322831709 10211979 1048576..1049556 1 NC_015061.1 PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: ebi:EbC_21600 xylose isomerase; xylose isomerase domain-containing protein TIM barrel 1049556 10211979 Rahaq_0985 Rahnella sp. Y9602 xylose isomerase domain-containing protein TIM barrel YP_004211736.1 1048576 D 741091 CDS YP_004211737.1 322831710 10211980 1049618..1050661 1 NC_015061.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: tau:Tola_1943 periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator 1050661 10211980 Rahaq_0986 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004211737.1 1049618 D 741091 CDS YP_004211738.1 322831711 10211981 1050694..1052187 1 NC_015061.1 KEGG: tau:Tola_1942 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1052187 10211981 Rahaq_0987 Rahnella sp. Y9602 ABC transporter YP_004211738.1 1050694 D 741091 CDS YP_004211739.1 322831712 10211982 1052239..1053210 1 NC_015061.1 PFAM: inner-membrane translocator; KEGG: pam:PANA_1875 RbsC; inner-membrane translocator 1053210 10211982 Rahaq_0988 Rahnella sp. Y9602 inner-membrane translocator YP_004211739.1 1052239 D 741091 CDS YP_004211740.1 322831713 10211983 1053210..1054067 1 NC_015061.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: ebi:EbC_21640 HTH-type transcriptional regulator RpiR; RpiR family transcriptional regulator 1054067 10211983 Rahaq_0989 Rahnella sp. Y9602 RpiR family transcriptional regulator YP_004211740.1 1053210 D 741091 CDS YP_004211741.1 322831714 10211984 1054069..1054929 1 NC_015061.1 PFAM: PfkB domain protein; KEGG: tau:Tola_1939 PfkB domain protein; PfkB domain-containing protein 1054929 10211984 Rahaq_0990 Rahnella sp. Y9602 PfkB domain-containing protein YP_004211741.1 1054069 D 741091 CDS YP_004211742.1 322831715 10211985 complement(1055004..1055309) 1 NC_015061.1 TIGRFAM: conserved hypothetical protein; KEGG: kpu:KP1_4355 hypothetical protein; hypothetical protein 1055309 10211985 Rahaq_0991 Rahnella sp. Y9602 hypothetical protein YP_004211742.1 1055004 R 741091 CDS YP_004211743.1 322831716 10211986 1055530..1056627 1 NC_015061.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: eay:EAM_2132 NADH:flavin oxidoreductase; NADH:flavin oxidoreductase 1056627 10211986 Rahaq_0992 Rahnella sp. Y9602 NADH:flavin oxidoreductase YP_004211743.1 1055530 D 741091 CDS YP_004211744.1 322831717 10211987 1056800..1060258 1 NC_015061.1 KEGG: ddc:Dd586_2006 exodeoxyribonuclease V, subunit gamma; TIGRFAM: exodeoxyribonuclease V, subunit gamma; exodeoxyribonuclease V subunit gamma 1060258 10211987 Rahaq_0993 Rahnella sp. Y9602 exodeoxyribonuclease V subunit gamma YP_004211744.1 1056800 D 741091 CDS YP_004211745.1 322831718 10211988 1060255..1063938 1 NC_015061.1 KEGG: ddd:Dda3937_02948 exonuclease V (RecBCD complex), subunit beta; TIGRFAM: exodeoxyribonuclease V, subunit beta; PFAM: UvrD/REP helicase; exodeoxyribonuclease V subunit beta 1063938 10211988 Rahaq_0994 Rahnella sp. Y9602 exodeoxyribonuclease V subunit beta YP_004211745.1 1060255 D 741091 CDS YP_004211746.1 322831719 10211989 1063935..1065989 1 NC_015061.1 KEGG: ddc:Dd586_2008 exodeoxyribonuclease V, subunit alpha; TIGRFAM: exodeoxyribonuclease V, subunit alpha; exodeoxyribonuclease V subunit alpha 1065989 10211989 Rahaq_0995 Rahnella sp. Y9602 exodeoxyribonuclease V subunit alpha YP_004211746.1 1063935 D 741091 CDS YP_004211747.1 322831720 10211990 complement(1066010..1066201) 1 NC_015061.1 KEGG: pam:PANA_0927 hypothetical protein; hypothetical protein 1066201 10211990 Rahaq_0996 Rahnella sp. Y9602 hypothetical protein YP_004211747.1 1066010 R 741091 CDS YP_004211748.1 322831721 10211991 complement(1066376..1066483) 1 NC_015061.1 KEGG: sbc:SbBS512_E1966 hypothetical protein; hypothetical protein 1066483 10211991 Rahaq_0997 Rahnella sp. Y9602 hypothetical protein YP_004211748.1 1066376 R 741091 CDS YP_004211749.1 322831722 10211992 complement(1066477..1066665) 1 NC_015061.1 KEGG: ypb:YPTS_3753 regulatory protein CsrD; hypothetical protein 1066665 10211992 Rahaq_0998 Rahnella sp. Y9602 hypothetical protein YP_004211749.1 1066477 R 741091 CDS YP_004211750.1 322831723 10211993 complement(1066753..1067997) 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: avn:Avin_17740 MFS transporter; major facilitator superfamily protein 1067997 10211993 Rahaq_0999 Rahnella sp. Y9602 major facilitator superfamily protein YP_004211750.1 1066753 R 741091 CDS YP_004211751.1 322831724 10211994 complement(1067994..1069145) 1 NC_015061.1 PFAM: beta-lactamase; KEGG: bcm:Bcenmc03_4045 beta-lactamase; beta-lactamase 1069145 10211994 Rahaq_1000 Rahnella sp. Y9602 beta-lactamase YP_004211751.1 1067994 R 741091 CDS YP_004211752.1 322831725 10211995 1069260..1070168 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pct:PC1_3565 transcriptional regulator, LysR family; LysR family transcriptional regulator 1070168 10211995 Rahaq_1001 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004211752.1 1069260 D 741091 CDS YP_004211753.1 322831726 10211996 1070196..1070687 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rhi:NGR_c05090 acetyltransferase; N-acetyltransferase GCN5 1070687 10211996 Rahaq_1002 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004211753.1 1070196 D 741091 CDS YP_004211754.1 322831727 10211997 1070802..1071281 1 NC_015061.1 KEGG: dda:Dd703_3814 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 1071281 10211997 Rahaq_1003 Rahnella sp. Y9602 helix-turn-helix domain-containing protein YP_004211754.1 1070802 D 741091 CDS YP_004211755.1 322831728 10211998 1071415..1072977 1 NC_015061.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: eca:ECA3374 signaling membrane protein; SMART: GGDEF domain containing protein; diguanylate cyclase 1072977 10211998 Rahaq_1004 Rahnella sp. Y9602 diguanylate cyclase YP_004211755.1 1071415 D 741091 CDS YP_004211756.1 322831729 10212000 complement(1073409..1074137) 1 NC_015061.1 KEGG: ebi:EbC_45200 conserved uncharacterized protein YiaF; hypothetical protein 1074137 10212000 Rahaq_1006 Rahnella sp. Y9602 hypothetical protein YP_004211756.1 1073409 R 741091 CDS YP_004211757.1 322831730 10212001 1074266..1075372 1 NC_015061.1 PFAM: protein of unknown function DUF1615; KEGG: spe:Spro_0988 hypothetical protein; hypothetical protein 1075372 10212001 Rahaq_1007 Rahnella sp. Y9602 hypothetical protein YP_004211757.1 1074266 D 741091 CDS YP_004211758.1 322831731 10212002 1075725..1075937 1 NC_015061.1 KEGG: spe:Spro_2061 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock protein 1075937 10212002 Rahaq_1008 Rahnella sp. Y9602 cold-shock protein YP_004211758.1 1075725 D 741091 CDS YP_004211759.1 322831732 10212003 complement(1076573..1076710) 1 NC_015061.1 hypothetical protein 1076710 10212003 Rahaq_1009 Rahnella sp. Y9602 hypothetical protein YP_004211759.1 1076573 R 741091 CDS YP_004211760.1 322831733 10212004 complement(1076802..1076912) 1 NC_015061.1 hypothetical protein 1076912 10212004 Rahaq_1010 Rahnella sp. Y9602 hypothetical protein YP_004211760.1 1076802 R 741091 CDS YP_004211761.1 322831734 10212005 1077388..1078725 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA0937 transport protein; major facilitator superfamily protein 1078725 10212005 Rahaq_1011 Rahnella sp. Y9602 major facilitator superfamily protein YP_004211761.1 1077388 D 741091 CDS YP_004211762.1 322831735 10212006 1078718..1080064 1 NC_015061.1 KEGG: tau:Tola_2583 glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein; glucarate dehydratase 1080064 10212006 Rahaq_1012 Rahnella sp. Y9602 glucarate dehydratase YP_004211762.1 1078718 D 741091 CDS YP_004211763.1 322831736 10212007 complement(1080102..1080305) 1 NC_015061.1 KEGG: fgr:FG02859.1 hypothetical protein; hypothetical protein 1080305 10212007 Rahaq_1013 Rahnella sp. Y9602 hypothetical protein YP_004211763.1 1080102 R 741091 CDS YP_004211764.1 322831737 10212008 complement(1080441..1081691) 1 NC_015061.1 KEGG: ebi:EbC_32370 resistance protein; TIGRFAM: Oxalate/Formate Antiporter; PFAM: major facilitator superfamily MFS_1; Oxalate/Formate Antiporter 1081691 10212008 Rahaq_1014 Rahnella sp. Y9602 Oxalate/Formate Antiporter YP_004211764.1 1080441 R 741091 CDS YP_004211765.1 322831738 10212009 complement(1082068..1082844) 1 NC_015061.1 PFAM: alpha/beta hydrolase fold; KEGG: cvi:CV_2920 hydrolase; alpha/beta hydrolase 1082844 10212009 Rahaq_1015 Rahnella sp. Y9602 alpha/beta hydrolase YP_004211765.1 1082068 R 741091 CDS YP_004211766.1 322831739 10212010 1083071..1083436 1 NC_015061.1 KEGG: ebi:EbC_11880 hypothetical protein; hypothetical protein 1083436 10212010 Rahaq_1016 Rahnella sp. Y9602 hypothetical protein YP_004211766.1 1083071 D 741091 CDS YP_004211767.1 322831740 10212011 1083644..1085590 1 NC_015061.1 TIGRFAM: penicillin-binding protein 2; KEGG: kpe:KPK_2538 penicillin-binding protein; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; penicillin-binding protein 2 1085590 10212011 Rahaq_1017 Rahnella sp. Y9602 penicillin-binding protein 2 YP_004211767.1 1083644 D 741091 CDS YP_004211768.1 322831741 10212012 complement(1085604..1086371) 1 NC_015061.1 KEGG: hde:HDEF_1936 RTX-family protein-22; hypothetical protein 1086371 10212012 Rahaq_1018 Rahnella sp. Y9602 hypothetical protein YP_004211768.1 1085604 R 741091 CDS YP_004211769.1 322831742 10212013 complement(1086465..1087187) 1 NC_015061.1 KEGG: hde:HDEF_1711 RTX-family protein-21; hypothetical protein 1087187 10212013 Rahaq_1019 Rahnella sp. Y9602 hypothetical protein YP_004211769.1 1086465 R 741091 CDS YP_004211770.1 322831743 10212014 1087927..1089390 1 NC_015061.1 KEGG: yen:YE1035 two-component system sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 1089390 10212014 Rahaq_1020 Rahnella sp. Y9602 integral membrane sensor signal transduction histidine kinase YP_004211770.1 1087927 D 741091 CDS YP_004211771.1 322831744 10212015 1089390..1090145 1 NC_015061.1 KEGG: spe:Spro_3652 hypothetical protein; hypothetical protein 1090145 10212015 Rahaq_1021 Rahnella sp. Y9602 hypothetical protein YP_004211771.1 1089390 D 741091 CDS YP_004211772.1 322831745 10212016 1090142..1091479 1 NC_015061.1 KEGG: spe:Spro_3651 two component, sigma54 specific, fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; SMART: response regulator receiver; AAA ATPase; two component, sigma-54 specific, transcriptional regulator 1091479 10212016 Rahaq_1022 Rahnella sp. Y9602 two component, sigma-54 specific, transcriptional regulator YP_004211772.1 1090142 D 741091 CDS YP_004211773.1 322831746 10212017 1091634..1091972 1 NC_015061.1 PFAM: nitrogen regulatory protein P-II; KEGG: spe:Spro_3649 nitrogen regulatory protein P-II 1; nitrogen regulatory protein P-II 1091972 10212017 Rahaq_1023 Rahnella sp. Y9602 nitrogen regulatory protein P-II YP_004211773.1 1091634 D 741091 CDS YP_004211774.1 322831747 10212018 1092392..1092913 1 NC_015061.1 KEGG: har:HEAR2556 hypothetical protein; hypothetical protein 1092913 10212018 Rahaq_1024 Rahnella sp. Y9602 hypothetical protein YP_004211774.1 1092392 D 741091 CDS YP_004211775.1 322831748 10212019 1092940..1094541 1 NC_015061.1 PFAM: FAD dependent oxidoreductase; KEGG: har:HEAR2557 glucose dehydrogenase; FAD dependent oxidoreductase 1094541 10212019 Rahaq_1025 Rahnella sp. Y9602 FAD dependent oxidoreductase YP_004211775.1 1092940 D 741091 CDS YP_004211776.1 322831749 10212020 1094552..1095955 1 NC_015061.1 KEGG: har:HEAR2558 alcohol dehydrogenase cytochrome c subunit precursor; gluconate 2-dehydrogenase (acceptor) 1095955 10212020 Rahaq_1026 Rahnella sp. Y9602 gluconate 2-dehydrogenase (acceptor) YP_004211776.1 1094552 D 741091 CDS YP_004211777.1 322831750 10212021 complement(1096020..1097210) 1 NC_015061.1 PFAM: globin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: pwa:Pecwa_1230 nitric oxide dioxygenase; globin 1097210 10212021 Rahaq_1027 Rahnella sp. Y9602 globin YP_004211777.1 1096020 R 741091 CDS YP_004211778.1 322831751 10212022 1097432..1098796 1 NC_015061.1 KEGG: spe:Spro_3638 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase; glycine hydroxymethyltransferase 1098796 10212022 Rahaq_1028 Rahnella sp. Y9602 glycine hydroxymethyltransferase YP_004211778.1 1097432 D 741091 CDS YP_004211779.1 322831752 10212023 1098960..1100120 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE1049 3-phenylpropionic acid transporter; major facilitator superfamily protein 1100120 10212023 Rahaq_1029 Rahnella sp. Y9602 major facilitator superfamily protein YP_004211779.1 1098960 D 741091 CDS YP_004211780.1 322831753 10212024 complement(1100117..1101397) 1 NC_015061.1 PFAM: PRD domain protein; KEGG: spe:Spro_3633 stationary phase inducible protein CsiE; transcriptional antiterminator BglG 1101397 10212024 Rahaq_1030 Rahnella sp. Y9602 transcriptional antiterminator BglG YP_004211780.1 1100117 R 741091 CDS YP_004211781.1 322831754 10212025 1101531..1102250 1 NC_015061.1 PFAM: protein of unknown function DUF1007; KEGG: spe:Spro_3632 hypothetical protein; hypothetical protein 1102250 10212025 Rahaq_1031 Rahnella sp. Y9602 hypothetical protein YP_004211781.1 1101531 D 741091 CDS YP_004211782.1 322831755 10212026 1102241..1103260 1 NC_015061.1 PFAM: high-affinity nickel-transporter; KEGG: spe:Spro_3631 high-affinity nickel-transporter; high-affinity nickel-transporter 1103260 10212026 Rahaq_1032 Rahnella sp. Y9602 high-affinity nickel-transporter YP_004211782.1 1102241 D 741091 CDS YP_004211783.1 322831756 10212027 complement(1103341..1104144) 1 NC_015061.1 PFAM: inositol monophosphatase; KEGG: spe:Spro_3630 inositol monophosphatase; inositol monophosphatase 1104144 10212027 Rahaq_1033 Rahnella sp. Y9602 inositol monophosphatase YP_004211783.1 1103341 R 741091 CDS YP_004211784.1 322831757 10212028 1104272..1105009 1 NC_015061.1 KEGG: yen:YE1055 SpoU family rRNA methylase; TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA methyltransferase, TrmH family, group 1 1105009 10212028 Rahaq_1034 Rahnella sp. Y9602 RNA methyltransferase, TrmH family, group 1 YP_004211784.1 1104272 D 741091 CDS YP_004211785.1 322831758 10212029 1105225..1105719 1 NC_015061.1 KEGG: spe:Spro_3628 DNA-binding transcriptional regulator IscR; TIGRFAM: iron-sulfur cluster assembly transcription factor IscR; transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; BadM/Rrf2 family transcriptional regulator 1105719 10212029 Rahaq_1035 Rahnella sp. Y9602 BadM/Rrf2 family transcriptional regulator YP_004211785.1 1105225 D 741091 CDS YP_004211786.1 322831759 10212030 1105994..1107163 1 NC_015061.1 TIGRFAM: cysteine desulfurase IscS; KEGG: eca:ECA3237 cysteine desulfurase; PFAM: aminotransferase class V; cysteine desulfurase IscS 1107163 10212030 Rahaq_1036 Rahnella sp. Y9602 cysteine desulfurase IscS YP_004211786.1 1105994 D 741091 CDS YP_004211787.1 322831760 10212031 1107245..1108555 1 NC_015061.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: spe:Spro_3620 aminopeptidase B; peptidase M17 leucyl aminopeptidase domain-containing protein 1108555 10212031 Rahaq_1037 Rahnella sp. Y9602 peptidase M17 leucyl aminopeptidase domain-containing protein YP_004211787.1 1107245 D 741091 CDS YP_004211788.1 322831761 10212032 1108638..1109501 1 NC_015061.1 KEGG: spe:Spro_3619 enhanced serine sensitivity protein SseB; enhanced serine sensitivity protein SseB 1109501 10212032 Rahaq_1038 Rahnella sp. Y9602 enhanced serine sensitivity protein SseB YP_004211788.1 1108638 D 741091 CDS YP_004211789.1 322831762 10212033 1109724..1110149 1 NC_015061.1 PFAM: nucleoside diphosphate kinase; KEGG: spe:Spro_3613 nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase; nucleoside-diphosphate kinase 1110149 10212033 Rahaq_1039 Rahnella sp. Y9602 nucleoside-diphosphate kinase YP_004211789.1 1109724 D 741091 CDS YP_004211790.1 322831763 10212034 1110375..1111574 1 NC_015061.1 KEGG: spe:Spro_3612 ribosomal RNA large subunit methyltransferase N; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; radical SAM enzyme, Cfr family 1111574 10212034 Rahaq_1040 Rahnella sp. Y9602 radical SAM enzyme, Cfr family YP_004211790.1 1110375 D 741091 CDS YP_004211791.1 322831764 10212035 1111651..1112412 1 NC_015061.1 TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: spe:Spro_3611 type IV pilus biogenesis/stability protein PilW; SMART: Tetratricopeptide repeat; type IV pilus biogenesis/stability protein PilW 1112412 10212035 Rahaq_1041 Rahnella sp. Y9602 type IV pilus biogenesis/stability protein PilW YP_004211791.1 1111651 D 741091 CDS YP_004211792.1 322831765 10212036 1112402..1113394 1 NC_015061.1 KEGG: spe:Spro_3610 cytoskeletal protein RodZ; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 1113394 10212036 Rahaq_1042 Rahnella sp. Y9602 XRE family transcriptional regulator YP_004211792.1 1112402 D 741091 CDS YP_004211793.1 322831766 10212037 1113437..1114558 1 NC_015061.1 KEGG: spe:Spro_3609 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 1114558 10212037 Rahaq_1043 Rahnella sp. Y9602 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_004211793.1 1113437 D 741091 CDS YP_004211794.1 322831767 10212038 1114695..1115969 1 NC_015061.1 TIGRFAM: histidyl-tRNA synthetase; KEGG: yen:YE1074 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; histidyl-tRNA synthetase 1115969 10212038 Rahaq_1044 Rahnella sp. Y9602 histidyl-tRNA synthetase YP_004211794.1 1114695 D 741091 CDS YP_004211795.1 322831768 10212039 1115983..1116603 1 NC_015061.1 PFAM: Protein of unknown function DUF2133; KEGG: spe:Spro_3607 hypothetical protein; hypothetical protein 1116603 10212039 Rahaq_1045 Rahnella sp. Y9602 hypothetical protein YP_004211795.1 1115983 D 741091 CDS YP_004211796.1 322831769 10212040 1116615..1117796 1 NC_015061.1 TIGRFAM: outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone repeat-containing protein; KEGG: spe:Spro_3606 outer membrane protein assembly complex subunit YfgL; SMART: Pyrrolo-quinoline quinone beta-propeller repeat; outer membrane assembly lipoprotein YfgL 1117796 10212040 Rahaq_1046 Rahnella sp. Y9602 outer membrane assembly lipoprotein YfgL YP_004211796.1 1116615 D 741091 CDS YP_004211797.1 322831770 10212041 1118008..1119492 1 NC_015061.1 KEGG: yen:YE1077 GTP-binding protein EngA; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; ribosome-associated GTPase EngA 1119492 10212041 Rahaq_1047 Rahnella sp. Y9602 ribosome-associated GTPase EngA YP_004211797.1 1118008 D 741091 CDS YP_004211798.1 322831771 10212042 1119559..1120515 1 NC_015061.1 PFAM: Auxin Efflux Carrier; KEGG: yen:YE1078 hypothetical protein; auxin efflux carrier family protein 1120515 10212042 Rahaq_1048 Rahnella sp. Y9602 auxin efflux carrier family protein YP_004211798.1 1119559 D 741091 CDS YP_004211799.1 322831772 10212043 1120527..1120757 1 NC_015061.1 PFAM: protein of unknown function DUF1407; KEGG: ypg:YpAngola_A0411 hypothetical protein; hypothetical protein 1120757 10212043 Rahaq_1049 Rahnella sp. Y9602 hypothetical protein YP_004211799.1 1120527 D 741091 CDS YP_004211800.1 322831773 10212044 complement(1120742..1121086) 1 NC_015061.1 KEGG: spe:Spro_3602 hypothetical protein; hypothetical protein 1121086 10212044 Rahaq_1050 Rahnella sp. Y9602 hypothetical protein YP_004211800.1 1120742 R 741091 CDS YP_004211801.1 322831774 10212045 complement(1121087..1122121) 1 NC_015061.1 PFAM: peptidase M4 thermolysin; Peptidase M4 thermolysin; KEGG: enc:ECL_03848 zinc metalloprotease; peptidase M4 thermolysin 1122121 10212045 Rahaq_1051 Rahnella sp. Y9602 peptidase M4 thermolysin YP_004211801.1 1121087 R 741091 CDS YP_004211802.1 322831775 10212046 complement(1122257..1123339) 1 NC_015061.1 KEGG: spe:Spro_3600 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator 1123339 10212046 Rahaq_1052 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004211802.1 1122257 R 741091 CDS YP_004211803.1 322831776 10212047 1123554..1124867 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3599 major facilitator transporter; major facilitator superfamily protein 1124867 10212047 Rahaq_1053 Rahnella sp. Y9602 major facilitator superfamily protein YP_004211803.1 1123554 D 741091 CDS YP_004211804.1 322831777 10212048 1124864..1127227 1 NC_015061.1 PFAM: glycoside hydrolase family 31; KEGG: spe:Spro_3598 alpha-glucosidase; glycoside hydrolase 1127227 10212048 Rahaq_1054 Rahnella sp. Y9602 glycoside hydrolase YP_004211804.1 1124864 D 741091 CDS YP_004211805.1 322831778 10212049 complement(1127281..1128654) 1 NC_015061.1 KEGG: spe:Spro_3597 exodeoxyribonuclease VII large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type; exodeoxyribonuclease VII large subunit 1128654 10212049 Rahaq_1055 Rahnella sp. Y9602 exodeoxyribonuclease VII large subunit YP_004211805.1 1127281 R 741091 CDS YP_004211806.1 322831779 10212050 1128655..1130289 1 NC_015061.1 SMART: CBS domain containing protein; TIGRFAM: inosine-5'-monophosphate dehydrogenase; KEGG: yps:YPTB2833 inosine 5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; inosine-5'-monophosphate dehydrogenase 1130289 10212050 Rahaq_1056 Rahnella sp. Y9602 inosine-5'-monophosphate dehydrogenase YP_004211806.1 1128655 D 741091 CDS YP_004211807.1 322831780 10212051 1130394..1131971 1 NC_015061.1 KEGG: spe:Spro_3595 GMP synthase; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; GMP synthase 1131971 10212051 Rahaq_1057 Rahnella sp. Y9602 GMP synthase YP_004211807.1 1130394 D 741091 CDS YP_004211808.1 322831781 10212052 1132225..1133559 1 NC_015061.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; GAF domain protein; PAS fold-3 domain protein; KEGG: mms:mma_1577 sensory box protein; SMART: GGDEF domain containing protein; PAS domain containing protein; GAF domain protein; PAS/PAC and GAF sensor-containing diguanylate cyclase 1133559 10212052 Rahaq_1058 Rahnella sp. Y9602 PAS/PAC and GAF sensor-containing diguanylate cyclase YP_004211808.1 1132225 D 741091 CDS YP_004211809.1 322831782 10212053 complement(1133678..1134451) 1 NC_015061.1 KEGG: rpf:Rpic12D_4017 ribosyldihydronicotinamide dehydrogenase (quinone); PFAM: NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase (quinone) 1134451 10212053 Rahaq_1059 Rahnella sp. Y9602 NAD(P)H dehydrogenase (quinone) YP_004211809.1 1133678 R 741091 CDS YP_004211810.1 322831783 10212054 1134537..1135430 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2459 LysR family transcriptional regulator; LysR family transcriptional regulator 1135430 10212054 Rahaq_1060 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004211810.1 1134537 D 741091 CDS YP_004211811.1 322831784 10212055 complement(1135482..1136141) 1 NC_015061.1 KEGG: ebd:ECBD_2209 uncharacterized lipoprotein YdcL; lipoprotein YdcL 1136141 10212055 Rahaq_1061 Rahnella sp. Y9602 lipoprotein YdcL YP_004211811.1 1135482 R 741091 CDS YP_004211812.1 322831785 10212056 complement(1136281..1136715) 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_3579 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1136715 10212056 Rahaq_1062 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004211812.1 1136281 R 741091 CDS YP_004211813.1 322831786 10212057 1137002..1137811 1 NC_015061.1 KEGG: eca:ECA3197 hydroxyethylthiazole kinase; PFAM: hydroxyethylthiazole kinase; hydroxyethylthiazole kinase 1137811 10212057 Rahaq_1063 Rahnella sp. Y9602 hydroxyethylthiazole kinase YP_004211813.1 1137002 D 741091 CDS YP_004211814.1 322831787 10212058 1137808..1138608 1 NC_015061.1 TIGRFAM: phosphomethylpyrimidine kinase; KEGG: spe:Spro_3577 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase 1138608 10212058 Rahaq_1064 Rahnella sp. Y9602 phosphomethylpyrimidine kinase YP_004211814.1 1137808 D 741091 CDS YP_004211815.1 322831788 10212059 complement(1138616..1139464) 1 NC_015061.1 KEGG: ypy:YPK_1322 hypothetical protein; hypothetical protein 1139464 10212059 Rahaq_1065 Rahnella sp. Y9602 hypothetical protein YP_004211815.1 1138616 R 741091 CDS YP_004211816.1 322831789 10212060 complement(1139587..1140273) 1 NC_015061.1 KEGG: spe:Spro_3567 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 1140273 10212060 Rahaq_1066 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004211816.1 1139587 R 741091 CDS YP_004211817.1 322831790 10212061 complement(1140364..1141200) 1 NC_015061.1 KEGG: enc:ECL_00183 transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 1141200 10212061 Rahaq_1067 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004211817.1 1140364 R 741091 CDS YP_004211818.1 322831791 10212062 1141473..1142882 1 NC_015061.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: cro:ROD_42321 hypothetical protein; sugar (Glycoside-Pentoside-Hexuronide) transporter 1142882 10212062 Rahaq_1068 Rahnella sp. Y9602 sugar (Glycoside-Pentoside-Hexuronide) transporter YP_004211818.1 1141473 D 741091 CDS YP_004211819.1 322831792 10212063 1142906..1144879 1 NC_015061.1 PFAM: protein of unknown function DUF1680; KEGG: sed:SeD_A4064 hypothetical protein; hypothetical protein 1144879 10212063 Rahaq_1069 Rahnella sp. Y9602 hypothetical protein YP_004211819.1 1142906 D 741091 CDS YP_004211820.1 322831793 10212064 complement(1144885..1145439) 1 NC_015061.1 TIGRFAM: chorismate mutase; KEGG: sew:SeSA_A1358 chorismate mutase; PFAM: Chorismate mutase, type II; chorismate mutase 1145439 10212064 Rahaq_1070 Rahnella sp. Y9602 chorismate mutase YP_004211820.1 1144885 R 741091 CDS YP_004211821.1 322831794 10212065 complement(1145717..1147006) 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3565 major facilitator transporter; major facilitator superfamily protein 1147006 10212065 Rahaq_1071 Rahnella sp. Y9602 major facilitator superfamily protein YP_004211821.1 1145717 R 741091 CDS YP_004211822.1 322831795 10212066 complement(1147130..1148143) 1 NC_015061.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: spe:Spro_3564 alcohol dehydrogenase; molecular chaperone GroES 1148143 10212066 Rahaq_1072 Rahnella sp. Y9602 molecular chaperone GroES YP_004211822.1 1147130 R 741091 CDS YP_004211823.1 322831796 10212067 complement(1148155..1149369) 1 NC_015061.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: spe:Spro_3563 mandelate racemase/muconate lactonizing protein; mandelate racemase/muconate lactonizing protein 1149369 10212067 Rahaq_1073 Rahnella sp. Y9602 mandelate racemase/muconate lactonizing protein YP_004211823.1 1148155 R 741091 CDS YP_004211824.1 322831797 10212068 complement(1149561..1150574) 1 NC_015061.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: apr:Apre_0576 malate/L-lactate dehydrogenase; malate/L-lactate dehydrogenase 1150574 10212068 Rahaq_1074 Rahnella sp. Y9602 malate/L-lactate dehydrogenase YP_004211824.1 1149561 R 741091 CDS YP_004211825.1 322831798 10212069 complement(1150561..1152123) 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_0691 oligogalacturonide transporter; major facilitator superfamily protein 1152123 10212069 Rahaq_1075 Rahnella sp. Y9602 major facilitator superfamily protein YP_004211825.1 1150561 R 741091 CDS YP_004211826.1 322831799 10212070 complement(1152369..1153256) 1 NC_015061.1 KEGG: spe:Spro_3562 lipid kinase; PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; diacylglycerol kinase catalytic subunit 1153256 10212070 Rahaq_1076 Rahnella sp. Y9602 diacylglycerol kinase catalytic subunit YP_004211826.1 1152369 R 741091 CDS YP_004211827.1 322831800 10212071 complement(1153626..1155011) 1 NC_015061.1 PFAM: peptidase U32; KEGG: yen:YE1100 protease; peptidase U32 1155011 10212071 Rahaq_1077 Rahnella sp. Y9602 peptidase U32 YP_004211827.1 1153626 R 741091 CDS YP_004211828.1 322831801 10212072 complement(1155198..1155545) 1 NC_015061.1 PFAM: protein of unknown function DUF1508; KEGG: spe:Spro_3560 hypothetical protein; hypothetical protein 1155545 10212072 Rahaq_1078 Rahnella sp. Y9602 hypothetical protein YP_004211828.1 1155198 R 741091 CDS YP_004211829.1 322831802 10212073 complement(1155700..1156419) 1 NC_015061.1 KEGG: spe:Spro_3557 DNA-binding transcriptional regulator BaeR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator 1156419 10212073 Rahaq_1079 Rahnella sp. Y9602 transcriptional regulator YP_004211829.1 1155700 R 741091 CDS YP_004211830.1 322831803 10212074 complement(1156420..1157805) 1 NC_015061.1 KEGG: spe:Spro_3556 signal transduction histidine-protein kinase BaeS; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase 1157805 10212074 Rahaq_1080 Rahnella sp. Y9602 integral membrane sensor signal transduction histidine kinase YP_004211830.1 1156420 R 741091 CDS YP_004211831.1 322831804 10212075 complement(1157802..1159277) 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3555 multidrug efflux system protein MdtE; major facilitator superfamily protein 1159277 10212075 Rahaq_1081 Rahnella sp. Y9602 major facilitator superfamily protein YP_004211831.1 1157802 R 741091 CDS YP_004211832.1 322831805 10212076 1159537..1160490 1 NC_015061.1 PFAM: aldo/keto reductase; KEGG: spe:Spro_3551 aldo/keto reductase; aldo/keto reductase 1160490 10212076 Rahaq_1082 Rahnella sp. Y9602 aldo/keto reductase YP_004211832.1 1159537 D 741091 CDS YP_004211833.1 322831806 10212077 complement(1160559..1161911) 1 NC_015061.1 KEGG: spe:Spro_3548 chaperone; chaperone 1161911 10212077 Rahaq_1083 Rahnella sp. Y9602 chaperone YP_004211833.1 1160559 R 741091 CDS YP_004211834.1 322831807 10212078 complement(1162053..1164047) 1 NC_015061.1 KEGG: spe:Spro_3954 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain-containing protein; Transketolase central region; transketolase 1164047 10212078 Rahaq_1084 Rahnella sp. Y9602 transketolase YP_004211834.1 1162053 R 741091 CDS YP_004211835.1 322831808 10212079 complement(1164104..1165054) 1 NC_015061.1 KEGG: spe:Spro_3479 transaldolase A; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase 1165054 10212079 Rahaq_1085 Rahnella sp. Y9602 transaldolase YP_004211835.1 1164104 R 741091 CDS YP_004211836.1 322831809 10212080 1165424..1167703 1 NC_015061.1 PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; KEGG: spe:Spro_3472 malic enzyme; malic protein NAD-binding protein 1167703 10212080 Rahaq_1086 Rahnella sp. Y9602 malic protein NAD-binding protein YP_004211836.1 1165424 D 741091 CDS YP_004211837.1 322831810 10212081 complement(1167763..1168710) 1 NC_015061.1 KEGG: spe:Spro_4396 purine nucleosidase; PFAM: Inosine/uridine-preferring nucleoside hydrolase; ribosylpyrimidine nucleosidase 1168710 10212081 Rahaq_1087 Rahnella sp. Y9602 ribosylpyrimidine nucleosidase YP_004211837.1 1167763 R 741091 CDS YP_004211838.1 322831811 10212082 complement(1168765..1169214) 1 NC_015061.1 PFAM: protein of unknown function DUF188; KEGG: ypb:YPTS_2857 hypothetical protein; hypothetical protein 1169214 10212082 Rahaq_1088 Rahnella sp. Y9602 hypothetical protein YP_004211838.1 1168765 R 741091 CDS YP_004211839.1 322831812 10212083 complement(1169214..1170164) 1 NC_015061.1 KEGG: spe:Spro_3464 coproporphyrinogen III oxidase; PFAM: coproporphyrinogen III oxidase; coproporphyrinogen oxidase 1170164 10212083 Rahaq_1089 Rahnella sp. Y9602 coproporphyrinogen oxidase YP_004211839.1 1169214 R 741091 CDS YP_004211840.1 322831813 10212084 complement(1170297..1171181) 1 NC_015061.1 KEGG: spe:Spro_3463 N-acetylmuramoyl-L-alanine amidase I; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; cell wall hydrolase/autolysin 1171181 10212084 Rahaq_1090 Rahnella sp. Y9602 cell wall hydrolase/autolysin YP_004211840.1 1170297 R 741091 CDS YP_004211841.1 322831814 10212085 1171458..1171883 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ddc:Dd586_0782 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1171883 10212085 Rahaq_1091 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004211841.1 1171458 D 741091 CDS YP_004211842.1 322831815 10212086 complement(1171947..1172348) 1 NC_015061.1 PFAM: protein of unknown function DUF388, OB-fold; KEGG: spe:Spro_3461 hypothetical protein; hypothetical protein 1172348 10212086 Rahaq_1092 Rahnella sp. Y9602 hypothetical protein YP_004211842.1 1171947 R 741091 CDS YP_004211843.1 322831816 10212087 1172563..1173006 1 NC_015061.1 KEGG: spe:Spro_3460 hypothetical protein; hypothetical protein 1173006 10212087 Rahaq_1093 Rahnella sp. Y9602 hypothetical protein YP_004211843.1 1172563 D 741091 CDS YP_004211844.1 322831817 10212088 1173157..1173786 1 NC_015061.1 PFAM: protein of unknown function DUF1131; KEGG: spe:Spro_3459 hypothetical protein; hypothetical protein 1173786 10212088 Rahaq_1094 Rahnella sp. Y9602 hypothetical protein YP_004211844.1 1173157 D 741091 CDS YP_004211845.1 322831818 10212089 1173891..1174790 1 NC_015061.1 KEGG: spe:Spro_3458 Dyp-type peroxidase family protein; TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; dyp-type peroxidase family protein 1174790 10212089 Rahaq_1095 Rahnella sp. Y9602 dyp-type peroxidase family protein YP_004211845.1 1173891 D 741091 CDS YP_004211846.1 322831819 10212090 1175003..1176025 1 NC_015061.1 KEGG: spe:Spro_3457 thiosulfate transporter subunit; TIGRFAM: sulfate ABC transporter periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; sulfate ABC transporter substrate-binding protein 1176025 10212090 Rahaq_1096 Rahnella sp. Y9602 sulfate ABC transporter substrate-binding protein YP_004211846.1 1175003 D 741091 CDS YP_004211847.1 322831820 10212091 1176025..1176855 1 NC_015061.1 KEGG: eta:ETA_10910 sulfate/thiosulfate transporter subunit; TIGRFAM: sulfate ABC transporter inner membrane subunit CysT; sulfate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter permease 1176855 10212091 Rahaq_1097 Rahnella sp. Y9602 sulfate ABC transporter permease YP_004211847.1 1176025 D 741091 CDS YP_004211848.1 322831821 10212092 1176855..1177730 1 NC_015061.1 KEGG: spe:Spro_3455 sulfate/thiosulfate transporter permease subunit; TIGRFAM: sulfate ABC transporter inner membrane subunit; sulfate ABC transporter inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter permease 1177730 10212092 Rahaq_1098 Rahnella sp. Y9602 sulfate ABC transporter permease YP_004211848.1 1176855 D 741091 CDS YP_004211849.1 322831822 10212093 1177720..1178814 1 NC_015061.1 TIGRFAM: sulfate ABC transporter ATPase subunit; PFAM: ABC transporter related; KEGG: yen:YE1197 sulfate/thiosulfate transporter subunit; SMART: AAA ATPase; sulfate ABC transporter ATPase 1178814 10212093 Rahaq_1099 Rahnella sp. Y9602 sulfate ABC transporter ATPase YP_004211849.1 1177720 D 741091 CDS YP_004211850.1 322831823 10212094 1178930..1179814 1 NC_015061.1 KEGG: eta:ETA_10940 cysteine synthase B (O-acetylserine sulfhydrolase B); TIGRFAM: cysteine synthase B; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein subunit beta; cysteine synthase B 1179814 10212094 Rahaq_1100 Rahnella sp. Y9602 cysteine synthase B YP_004211850.1 1178930 D 741091 CDS YP_004211851.1 322831824 10212095 1179917..1180600 1 NC_015061.1 KEGG: spe:Spro_3452 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator 1180600 10212095 Rahaq_1101 Rahnella sp. Y9602 transcriptional regulator YP_004211851.1 1179917 D 741091 CDS YP_004211852.1 322831825 10212096 1180581..1181930 1 NC_015061.1 manually curated; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: spe:Spro_3451 integral membrane sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase 1181930 10212096 Rahaq_1102 Rahnella sp. Y9602 integral membrane sensor signal transduction histidine kinase YP_004211852.1 1180581 D 741091 CDS YP_004211853.1 322831826 10212097 complement(1181986..1182495) 1 NC_015061.1 KEGG: yen:YE1205 PTS system glucose-specific transporter subunit; TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; PTS system glucose subfamily transporter subunit IIA 1182495 10212097 Rahaq_1103 Rahnella sp. Y9602 PTS system glucose subfamily transporter subunit IIA YP_004211853.1 1181986 R 741091 CDS YP_004211854.1 322831827 10212098 complement(1182544..1184271) 1 NC_015061.1 KEGG: spe:Spro_3449 phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; phosphoenolpyruvate-protein phosphotransferase 1184271 10212098 Rahaq_1104 Rahnella sp. Y9602 phosphoenolpyruvate-protein phosphotransferase YP_004211854.1 1182544 R 741091 CDS YP_004211855.1 322831828 10212099 complement(1184322..1184579) 1 NC_015061.1 KEGG: spe:Spro_3448 PTS system phosphohistidinoprotein-hexose phosphotransferase subunit HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; phosphotransferase system, phosphocarrier protein HPr 1184579 10212099 Rahaq_1105 Rahnella sp. Y9602 phosphotransferase system, phosphocarrier protein HPr YP_004211855.1 1184322 R 741091 CDS YP_004211856.1 322831829 10212100 complement(1184983..1185948) 1 NC_015061.1 KEGG: spe:Spro_3447 cysteine synthase A; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein subunit beta; cysteine synthase A 1185948 10212100 Rahaq_1106 Rahnella sp. Y9602 cysteine synthase A YP_004211856.1 1184983 R 741091 CDS YP_004211857.1 322831830 10212101 complement(1186159..1186959) 1 NC_015061.1 KEGG: spe:Spro_3446 sulfate transport protein CysZ; sulfate transport protein CysZ 1186959 10212101 Rahaq_1107 Rahnella sp. Y9602 sulfate transport protein CysZ YP_004211857.1 1186159 R 741091 CDS YP_004211858.1 322831831 10212102 1186990..1187139 1 NC_015061.1 hypothetical protein 1187139 10212102 Rahaq_1108 Rahnella sp. Y9602 hypothetical protein YP_004211858.1 1186990 D 741091 CDS YP_004211859.1 322831832 10212103 1187183..1188181 1 NC_015061.1 TIGRFAM: cell division protein ZipA; PFAM: ZipA FtsZ-binding region protein; KEGG: spe:Spro_3445 cell division protein ZipA; SMART: ZipA FtsZ-binding region protein; cell division protein ZipA 1188181 10212103 Rahaq_1109 Rahnella sp. Y9602 cell division protein ZipA YP_004211859.1 1187183 D 741091 CDS YP_004211860.1 322831833 10212104 1188253..1190274 1 NC_015061.1 TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; helix-hairpin-helix motif; BRCT domain protein; KEGG: spe:Spro_3444 NAD-dependent DNA ligase LigA; SMART: NAD-dependent DNA ligase ; Helix-hairpin-helix DNA-binding class 1; BRCT domain protein; NAD-dependent DNA ligase 1190274 10212104 Rahaq_1110 Rahnella sp. Y9602 NAD-dependent DNA ligase YP_004211860.1 1188253 D 741091 CDS YP_004211861.1 322831834 10212105 1190278..1190520 1 NC_015061.1 KEGG: pay:PAU_01410 hypothetical protein; hypothetical protein 1190520 10212105 Rahaq_1111 Rahnella sp. Y9602 hypothetical protein YP_004211861.1 1190278 D 741091 CDS YP_004211862.1 322831835 10212106 complement(1190599..1191588) 1 NC_015061.1 PFAM: Bile acid:sodium symporter; KEGG: spe:Spro_3442 bile acid:sodium symporter; bile acid:sodium symporter 1191588 10212106 Rahaq_1112 Rahnella sp. Y9602 bile acid:sodium symporter YP_004211862.1 1190599 R 741091 CDS YP_004211863.1 322831836 10212107 1191687..1192613 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3441 LysR family transcriptional regulator; LysR family transcriptional regulator 1192613 10212107 Rahaq_1113 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004211863.1 1191687 D 741091 CDS YP_004211864.1 322831837 10212108 complement(1192647..1192988) 1 NC_015061.1 KEGG: cko:CKO_00388 hypothetical protein; hypothetical protein 1192988 10212108 Rahaq_1114 Rahnella sp. Y9602 hypothetical protein YP_004211864.1 1192647 R 741091 CDS YP_004211865.1 322831838 10212109 complement(1193103..1193663) 1 NC_015061.1 PFAM: protein of unknown function DUF925; KEGG: ypb:YPTS_2808 hypothetical protein; hypothetical protein 1193663 10212109 Rahaq_1115 Rahnella sp. Y9602 hypothetical protein YP_004211865.1 1193103 R 741091 CDS YP_004211866.1 322831839 10212110 1193941..1195350 1 NC_015061.1 KEGG: kpu:KP1_1165 amino acid/amine transport protein; TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; ethanolamine transporter 1195350 10212110 Rahaq_1116 Rahnella sp. Y9602 ethanolamine transporter YP_004211866.1 1193941 D 741091 CDS YP_004211867.1 322831840 10212111 1195372..1196754 1 NC_015061.1 KEGG: spe:Spro_3436 ethanolamine ammonia lyase large subunit; PFAM: Ethanolamine ammonia lyase large subunit; ethanolamine ammonia-lyase 1196754 10212111 Rahaq_1117 Rahnella sp. Y9602 ethanolamine ammonia-lyase YP_004211867.1 1195372 D 741091 CDS YP_004211868.1 322831841 10212112 1196766..1197575 1 NC_015061.1 KEGG: spe:Spro_3435 ethanolamine ammonia-lyase; PFAM: Ethanolamine ammonia-lyase light chain; ethanolamine ammonia-lyase 1197575 10212112 Rahaq_1118 Rahnella sp. Y9602 ethanolamine ammonia-lyase YP_004211868.1 1196766 D 741091 CDS YP_004211869.1 322831842 10212117 1198340..1199758 1 NC_015061.1 KEGG: ddc:Dd586_3119 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; glutamyl-tRNA synthetase 1199758 10212117 Rahaq_1119 Rahnella sp. Y9602 glutamyl-tRNA synthetase YP_004211869.1 1198340 D 741091 CDS YP_004211870.1 322831843 10212118 complement(1199846..1200637) 1 NC_015061.1 PFAM: formate/nitrite transporter; KEGG: pam:PANA_2752 YrhG; formate/nitrite transporter 1200637 10212118 Rahaq_1120 Rahnella sp. Y9602 formate/nitrite transporter YP_004211870.1 1199846 R 741091 CDS YP_004211871.1 322831844 10212121 complement(1201351..1202538) 1 NC_015061.1 KEGG: sgl:SG1675 nucleoside transport protein NupC; TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter domain protein; Na+ dependent nucleoside transporter; nucleoside recognition domain protein; nucleoside transporter 1202538 10212121 Rahaq_1121 Rahnella sp. Y9602 nucleoside transporter YP_004211871.1 1201351 R 741091 CDS YP_004211872.1 322831845 10212122 1202956..1204185 1 NC_015061.1 KEGG: yen:YE1219 manganese transport protein MntH; TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; NRAMP family Mn2+/Fe2+ transporter 1204185 10212122 Rahaq_1122 Rahnella sp. Y9602 NRAMP family Mn2+/Fe2+ transporter YP_004211872.1 1202956 D 741091 CDS YP_004211873.1 322831846 10212123 complement(1204257..1204670) 1 NC_015061.1 PFAM: Protein of unknown function DUF2502; KEGG: pct:PC1_3425 hypothetical protein; hypothetical protein 1204670 10212123 Rahaq_1123 Rahnella sp. Y9602 hypothetical protein YP_004211873.1 1204257 R 741091 CDS YP_004211874.1 322831847 10212124 complement(1204830..1205819) 1 NC_015061.1 PFAM: aldo/keto reductase; KEGG: spe:Spro_3413 aldo/keto reductase; aldo/keto reductase 1205819 10212124 Rahaq_1124 Rahnella sp. Y9602 aldo/keto reductase YP_004211874.1 1204830 R 741091 CDS YP_004211875.1 322831848 10212125 1206148..1207806 1 NC_015061.1 PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; KEGG: spe:Spro_3412 thiamine pyrophosphate binding domain-containing protein; thiamine pyrophosphate TPP-binding domain-containing protein 1207806 10212125 Rahaq_1125 Rahnella sp. Y9602 thiamine pyrophosphate TPP-binding domain-containing protein YP_004211875.1 1206148 D 741091 CDS YP_004211876.1 322831849 10212126 complement(1207795..1208682) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: yen:YE1223 LysR family transcriptional regulator; LysR family transcriptional regulator 1208682 10212126 Rahaq_1126 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004211876.1 1207795 R 741091 CDS YP_004211877.1 322831850 10212127 1208815..1209288 1 NC_015061.1 PFAM: transmembrane pair domain-containing protein; KEGG: pwa:Pecwa_1025 transmembrane pair domain protein; transmembrane pair domain-containing protein 1209288 10212127 Rahaq_1127 Rahnella sp. Y9602 transmembrane pair domain-containing protein YP_004211877.1 1208815 D 741091 CDS YP_004211878.1 322831851 10212128 1209391..1210089 1 NC_015061.1 KEGG: yen:YE1289 aspartate/glutamate racemase; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; aspartate racemase 1210089 10212128 Rahaq_1128 Rahnella sp. Y9602 aspartate racemase YP_004211878.1 1209391 D 741091 CDS YP_004211879.1 322831852 10212129 complement(1210086..1211348) 1 NC_015061.1 PFAM: Cl- channel voltage-gated family protein; KEGG: spe:Spro_3408 hypothetical protein; Cl- channel voltage-gated family protein 1211348 10212129 Rahaq_1129 Rahnella sp. Y9602 Cl- channel voltage-gated family protein YP_004211879.1 1210086 R 741091 CDS YP_004211880.1 322831853 10212130 1211567..1212538 1 NC_015061.1 TIGRFAM: glucokinase; KEGG: efe:EFER_0780 glucokinase; PFAM: glucokinase; glucokinase 1212538 10212130 Rahaq_1130 Rahnella sp. Y9602 glucokinase YP_004211880.1 1211567 D 741091 CDS YP_004211881.1 322831854 10212131 complement(1212676..1213446) 1 NC_015061.1 KEGG: yen:YE1227 two-component system response-regulator; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; LytTR family two component transcriptional regulator 1213446 10212131 Rahaq_1131 Rahnella sp. Y9602 LytTR family two component transcriptional regulator YP_004211881.1 1212676 R 741091 CDS YP_004211882.1 322831855 10212132 complement(1213511..1215244) 1 NC_015061.1 KEGG: yen:YE1228 two-component system histidine kinase; PFAM: histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; signal transduction histidine kinase LytS 1215244 10212132 Rahaq_1132 Rahnella sp. Y9602 signal transduction histidine kinase LytS YP_004211882.1 1213511 R 741091 CDS YP_004211883.1 322831856 10212133 1215359..1215898 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_3402 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1215898 10212133 Rahaq_1133 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004211883.1 1215359 D 741091 CDS YP_004211884.1 322831857 10212134 1216016..1217275 1 NC_015061.1 PFAM: aminotransferase class I and II; KEGG: spe:Spro_3401 aminotransferase; class I and II aminotransferase 1217275 10212134 Rahaq_1134 Rahnella sp. Y9602 class I and II aminotransferase YP_004211884.1 1216016 D 741091 CDS YP_004211885.1 322831858 10212135 complement(1217356..1218198) 1 NC_015061.1 KEGG: pwa:Pecwa_2142 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 1218198 10212135 Rahaq_1135 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004211885.1 1217356 R 741091 CDS YP_004211886.1 322831859 10212136 complement(1218220..1218846) 1 NC_015061.1 PFAM: PEBP family protein; KEGG: tmz:Tmz1t_4061 protein of unknown function DUF524; PEBP family protein 1218846 10212136 Rahaq_1136 Rahnella sp. Y9602 PEBP family protein YP_004211886.1 1218220 R 741091 CDS YP_004211887.1 322831860 10212137 1218970..1219149 1 NC_015061.1 KEGG: pde:Pden_4339 response regulator receiver protein; hypothetical protein 1219149 10212137 Rahaq_1137 Rahnella sp. Y9602 hypothetical protein YP_004211887.1 1218970 D 741091 CDS YP_004211888.1 322831861 10212138 complement(1219192..1220997) 1 NC_015061.1 KEGG: xca:xccb100_1412 transporter-like membrane protein; transporter-like membrane protein 1220997 10212138 Rahaq_1138 Rahnella sp. Y9602 transporter-like membrane protein YP_004211888.1 1219192 R 741091 CDS YP_004211889.1 322831862 10212139 1221186..1221644 1 NC_015061.1 KEGG: avn:Avin_35800 hypothetical protein; hypothetical protein 1221644 10212139 Rahaq_1139 Rahnella sp. Y9602 hypothetical protein YP_004211889.1 1221186 D 741091 CDS YP_004211890.1 322831863 10212140 complement(1221712..1222545) 1 NC_015061.1 PFAM: Curli production assembly/transport component CsgG; KEGG: ebd:ECBD_2562 curli production assembly/transport component CsgG; curli production assembly/transport component CsgG 1222545 10212140 Rahaq_1140 Rahnella sp. Y9602 curli production assembly/transport component CsgG YP_004211890.1 1221712 R 741091 CDS YP_004211891.1 322831864 10212141 complement(1222578..1223042) 1 NC_015061.1 PFAM: Curli production assembly/transport component CsgF; KEGG: enc:ECL_02602 curli assembly protein CsgF; curli production assembly/transport component CsgF 1223042 10212141 Rahaq_1141 Rahnella sp. Y9602 curli production assembly/transport component CsgF YP_004211891.1 1222578 R 741091 CDS YP_004211892.1 322831865 10212142 complement(1223029..1223448) 1 NC_015061.1 PFAM: Curli assembly protein CsgE; KEGG: ent:Ent638_1555 curli assembly protein CsgE; curli assembly protein CsgE 1223448 10212142 Rahaq_1142 Rahnella sp. Y9602 curli assembly protein CsgE YP_004211892.1 1223029 R 741091 CDS YP_004211893.1 322831866 10212143 complement(1223429..1224079) 1 NC_015061.1 KEGG: ent:Ent638_1556 DNA-binding transcriptional regulator CsgD; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; LuxR family transcriptional regulator 1224079 10212143 Rahaq_1143 Rahnella sp. Y9602 LuxR family transcriptional regulator YP_004211893.1 1223429 R 741091 CDS YP_004211894.1 322831867 10212144 1224951..1225439 1 NC_015061.1 PFAM: Curlin associated repeat-containing protein; KEGG: ent:Ent638_1557 curlin minor subunit; curlin associated repeat-containing protein 1225439 10212144 Rahaq_1144 Rahnella sp. Y9602 curlin associated repeat-containing protein YP_004211894.1 1224951 D 741091 CDS YP_004211895.1 322831868 10212145 1225479..1225955 1 NC_015061.1 PFAM: Curlin associated repeat-containing protein; KEGG: cro:ROD_11011 major curlin subunit; curlin associated repeat-containing protein 1225955 10212145 Rahaq_1145 Rahnella sp. Y9602 curlin associated repeat-containing protein YP_004211895.1 1225479 D 741091 CDS YP_004211896.1 322831869 10212146 1226046..1226375 1 NC_015061.1 PFAM: Curli production protein CsgC; KEGG: sfx:S1113 autoagglutination protein; Curli production protein CsgC 1226375 10212146 Rahaq_1146 Rahnella sp. Y9602 Curli production protein CsgC YP_004211896.1 1226046 D 741091 CDS YP_004211897.1 322831870 10212147 complement(1226387..1227412) 1 NC_015061.1 KEGG: spe:Spro_2422 high-affinity nickel-transporter; TIGRFAM: high-affinity nickel-transporter; PFAM: high-affinity nickel-transporter; high-affinity nickel-transporter 1227412 10212147 Rahaq_1147 Rahnella sp. Y9602 high-affinity nickel-transporter YP_004211897.1 1226387 R 741091 CDS YP_004211898.1 322831871 10212148 complement(1227405..1229732) 1 NC_015061.1 KEGG: spe:Spro_2423 (NiFe) hydrogenase maturation protein HypF; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase; (NiFe) hydrogenase maturation protein HypF 1229732 10212148 Rahaq_1148 Rahnella sp. Y9602 (NiFe) hydrogenase maturation protein HypF YP_004211898.1 1227405 R 741091 CDS YP_004211899.1 322831872 10212149 complement(1229797..1231968) 1 NC_015061.1 KEGG: spe:Spro_2424 formate dehydrogenase subunit alpha; TIGRFAM: formate dehydrogenase, subunit alpha; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; formate dehydrogenase subunit alpha 1231968 10212149 Rahaq_1149 Rahnella sp. Y9602 formate dehydrogenase subunit alpha YP_004211899.1 1229797 R 741091 CDS YP_004211900.1 322831873 10212150 complement(1231992..1232537) 1 NC_015061.1 KEGG: spe:Spro_2425 electron transport protein HydN; electron transport protein HydN 1232537 10212150 Rahaq_1150 Rahnella sp. Y9602 electron transport protein HydN YP_004211900.1 1231992 R 741091 CDS YP_004211901.1 322831874 10212151 complement(1232866..1233351) 1 NC_015061.1 KEGG: spe:Spro_2426 hydrogenase 3 maturation protease; TIGRFAM: hydrogenase maturation protease HycI; hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; hydrogenase maturation protease HycI 1233351 10212151 Rahaq_1151 Rahnella sp. Y9602 hydrogenase maturation protease HycI YP_004211901.1 1232866 R 741091 CDS YP_004211902.1 322831875 10212152 complement(1233344..1233823) 1 NC_015061.1 PFAM: formate hydrogenlyase maturation HycH; KEGG: spe:Spro_2427 formate hydrogenlyase maturation HycH; formate hydrogenlyase maturation HycH 1233823 10212152 Rahaq_1152 Rahnella sp. Y9602 formate hydrogenlyase maturation HycH YP_004211902.1 1233344 R 741091 CDS YP_004211903.1 322831876 10212153 complement(1233823..1234620) 1 NC_015061.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: spe:Spro_2428 NADH ubiquinone oxidoreductase 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit 1234620 10212153 Rahaq_1153 Rahnella sp. Y9602 NADH ubiquinone oxidoreductase 20 kDa subunit YP_004211903.1 1233823 R 741091 CDS YP_004211904.1 322831877 10212154 complement(1234617..1235174) 1 NC_015061.1 KEGG: spe:Spro_2429 formate hydrogenlyase complex iron-sulfur subunit; formate hydrogenlyase complex iron-sulfur subunit 1235174 10212154 Rahaq_1154 Rahnella sp. Y9602 formate hydrogenlyase complex iron-sulfur subunit YP_004211904.1 1234617 R 741091 CDS YP_004211905.1 322831878 10212155 complement(1235190..1236914) 1 NC_015061.1 PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; nickel-dependent hydrogenase large subunit; NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: spe:Spro_2430 NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH dehydrogenase (ubiquinone) 30 kDa subunit 1236914 10212155 Rahaq_1155 Rahnella sp. Y9602 NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_004211905.1 1235190 R 741091 CDS YP_004211906.1 322831879 10212156 complement(1236959..1237912) 1 NC_015061.1 KEGG: spe:Spro_2431 respiratory-chain NADH dehydrogenase subunit 1; respiratory-chain NADH dehydrogenase subunit 1 1237912 10212156 Rahaq_1156 Rahnella sp. Y9602 respiratory-chain NADH dehydrogenase subunit 1 YP_004211906.1 1236959 R 741091 CDS YP_004211907.1 322831880 10212157 complement(1237923..1239827) 1 NC_015061.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: spe:Spro_2432 NADH dehydrogenase (quinone); NADH-ubiquinone/plastoquinone (complex I) oxidoreductase 1239827 10212157 Rahaq_1157 Rahnella sp. Y9602 NADH-ubiquinone/plastoquinone (complex I) oxidoreductase YP_004211907.1 1237923 R 741091 CDS YP_004211908.1 322831881 10212158 complement(1239824..1240453) 1 NC_015061.1 KEGG: spe:Spro_2433 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 1240453 10212158 Rahaq_1158 Rahnella sp. Y9602 4Fe-4S ferredoxin YP_004211908.1 1239824 R 741091 CDS YP_004211909.1 322831882 10212159 complement(1240601..1241068) 1 NC_015061.1 KEGG: spe:Spro_2434 formate hydrogenlyase regulatory protein HycA; formate hydrogenlyase regulatory protein HycA 1241068 10212159 Rahaq_1159 Rahnella sp. Y9602 formate hydrogenlyase regulatory protein HycA YP_004211909.1 1240601 R 741091 CDS YP_004211910.1 322831883 10212160 1241438..1241782 1 NC_015061.1 KEGG: spe:Spro_2435 hydrogenase nickel incorporation protein; TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA; hydrogenase nickel incorporation protein HypA 1241782 10212160 Rahaq_1160 Rahnella sp. Y9602 hydrogenase nickel incorporation protein HypA YP_004211910.1 1241438 D 741091 CDS YP_004211911.1 322831884 10212161 1241813..1242592 1 NC_015061.1 KEGG: asa:ASA_1799 hydrogenase accessory protein HypB; TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; hydrogenase nickel incorporation protein HypB 1242592 10212161 Rahaq_1161 Rahnella sp. Y9602 hydrogenase nickel incorporation protein HypB YP_004211911.1 1241813 D 741091 CDS YP_004211912.1 322831885 10212162 1242583..1242861 1 NC_015061.1 KEGG: spe:Spro_2437 hydrogenase assembly chaperone HypC/HupF; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); hydrogenase assembly chaperone HypC/HupF 1242861 10212162 Rahaq_1162 Rahnella sp. Y9602 hydrogenase assembly chaperone HypC/HupF YP_004211912.1 1242583 D 741091 CDS YP_004211913.1 322831886 10212163 1242861..1244033 1 NC_015061.1 KEGG: spe:Spro_2438 hydrogenase expression/formation protein HypD; TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; hydrogenase expression/formation protein HypD 1244033 10212163 Rahaq_1163 Rahnella sp. Y9602 hydrogenase expression/formation protein HypD YP_004211913.1 1242861 D 741091 CDS YP_004211914.1 322831887 10212164 1244026..1245048 1 NC_015061.1 KEGG: ddc:Dd586_2723 hydrogenase expression/formation protein HypE; TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; hydrogenase expression/formation protein HypE 1245048 10212164 Rahaq_1164 Rahnella sp. Y9602 hydrogenase expression/formation protein HypE YP_004211914.1 1244026 D 741091 CDS YP_004211915.1 322831888 10212165 1245139..1247241 1 NC_015061.1 KEGG: spe:Spro_2440 NifA subfamily transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; GAF domain protein; Fis family transcriptional regulator 1247241 10212165 Rahaq_1165 Rahnella sp. Y9602 Fis family transcriptional regulator YP_004211915.1 1245139 D 741091 CDS YP_004211916.1 322831889 10212166 complement(1247247..1247789) 1 NC_015061.1 KEGG: pam:PANA_4086 hypothetical protein; hypothetical protein 1247789 10212166 Rahaq_1166 Rahnella sp. Y9602 hypothetical protein YP_004211916.1 1247247 R 741091 CDS YP_004211917.1 322831890 10212167 complement(1247786..1248193) 1 NC_015061.1 KEGG: pam:PANA_4087 hypothetical protein; hypothetical protein 1248193 10212167 Rahaq_1167 Rahnella sp. Y9602 hypothetical protein YP_004211917.1 1247786 R 741091 CDS YP_004211918.1 322831891 10212168 complement(1248223..1248546) 1 NC_015061.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: kva:Kvar_2686 carboxymuconolactone decarboxylase; Carboxymuconolactone decarboxylase 1248546 10212168 Rahaq_1168 Rahnella sp. Y9602 Carboxymuconolactone decarboxylase YP_004211918.1 1248223 R 741091 CDS YP_004211919.1 322831892 10212169 1248652..1249533 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eta:ETA_08050 transcriptional regulator protein, LysR family; LysR family transcriptional regulator 1249533 10212169 Rahaq_1169 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004211919.1 1248652 D 741091 CDS YP_004211920.1 322831893 10212170 complement(1249544..1249744) 1 NC_015061.1 PFAM: DNA polymerase II subunit beta; KEGG: spe:Spro_1941 DNA polymerase III subunit theta; DNA polymerase II subunit beta 1249744 10212170 Rahaq_1170 Rahnella sp. Y9602 DNA polymerase II subunit beta YP_004211920.1 1249544 R 741091 CDS YP_004211921.1 322831894 10212171 complement(1249789..1250793) 1 NC_015061.1 KEGG: ecg:E2348C_3877 lipopolysaccharide core biosynthesis protein; hypothetical protein 1250793 10212171 Rahaq_1171 Rahnella sp. Y9602 hypothetical protein YP_004211921.1 1249789 R 741091 CDS YP_004211922.1 322831895 10212172 1250945..1251850 1 NC_015061.1 KEGG: ara:Arad_2932 dienelactone hydrolase protein; Carboxymethylenebutenolidase 1251850 10212172 Rahaq_1172 Rahnella sp. Y9602 Carboxymethylenebutenolidase YP_004211922.1 1250945 D 741091 CDS YP_004211923.1 322831896 10212173 complement(1251905..1252750) 1 NC_015061.1 PFAM: Glutathione S-transferase domain; KEGG: esa:ESA_00138 glutathione S-transferase YghU; glutathione S-transferase 1252750 10212173 Rahaq_1173 Rahnella sp. Y9602 glutathione S-transferase YP_004211923.1 1251905 R 741091 CDS YP_004211924.1 322831897 10212174 complement(1252843..1253904) 1 NC_015061.1 KEGG: yen:YE3357 LacI-family regulatory protein; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator 1253904 10212174 Rahaq_1174 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004211924.1 1252843 R 741091 CDS YP_004211925.1 322831898 10212175 1254189..1255364 1 NC_015061.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: enc:ECL_00620 hypothetical protein; oxidoreductase domain-containing protein 1255364 10212175 Rahaq_1175 Rahnella sp. Y9602 oxidoreductase domain-containing protein YP_004211925.1 1254189 D 741091 CDS YP_004211926.1 322831899 10212176 1255367..1256434 1 NC_015061.1 PFAM: oxidoreductase domain protein; KEGG: enc:ECL_00619 dehydrogenase; oxidoreductase domain-containing protein 1256434 10212176 Rahaq_1176 Rahnella sp. Y9602 oxidoreductase domain-containing protein YP_004211926.1 1255367 D 741091 CDS YP_004211927.1 322831900 10212177 1256448..1257470 1 NC_015061.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: enc:ECL_00618 hypothetical protein; oxidoreductase domain-containing protein 1257470 10212177 Rahaq_1177 Rahnella sp. Y9602 oxidoreductase domain-containing protein YP_004211927.1 1256448 D 741091 CDS YP_004211928.1 322831901 10212178 1257512..1259050 1 NC_015061.1 KEGG: cro:ROD_32731 major facilitator superfamily transporter; major facilitator superfamily transporter 1259050 10212178 Rahaq_1178 Rahnella sp. Y9602 major facilitator superfamily transporter YP_004211928.1 1257512 D 741091 CDS YP_004211929.1 322831902 10212179 complement(1259093..1259620) 1 NC_015061.1 KEGG: eca:ECA0956 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; Phosphinothricin acetyltransferase 1259620 10212179 Rahaq_1179 Rahnella sp. Y9602 Phosphinothricin acetyltransferase YP_004211929.1 1259093 R 741091 CDS YP_004211930.1 322831903 10212180 1259855..1260673 1 NC_015061.1 KEGG: cko:CKO_05126 cytoplasmic membrane lipoprotein-28; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; lipoprotein 1260673 10212180 Rahaq_1180 Rahnella sp. Y9602 lipoprotein YP_004211930.1 1259855 D 741091 CDS YP_004211931.1 322831904 10212181 complement(1260860..1262575) 1 NC_015061.1 PFAM: Protein of unknown function DUF2326; KEGG: kko:Kkor_0200 hypothetical protein; hypothetical protein 1262575 10212181 Rahaq_1181 Rahnella sp. Y9602 hypothetical protein YP_004211931.1 1260860 R 741091 CDS YP_004211932.1 322831905 10212182 complement(1262562..1262804) 1 NC_015061.1 KEGG: kko:Kkor_0199 hypothetical protein; hypothetical protein 1262804 10212182 Rahaq_1182 Rahnella sp. Y9602 hypothetical protein YP_004211932.1 1262562 R 741091 CDS YP_004211933.1 322831906 10212183 complement(1262801..1263766) 1 NC_015061.1 KEGG: kko:Kkor_0198 hypothetical protein; hypothetical protein 1263766 10212183 Rahaq_1183 Rahnella sp. Y9602 hypothetical protein YP_004211933.1 1262801 R 741091 CDS YP_004211934.1 322831907 10212184 complement(1264143..1264892) 1 NC_015061.1 KEGG: pct:PC1_0717 hypothetical protein; hypothetical protein 1264892 10212184 Rahaq_1184 Rahnella sp. Y9602 hypothetical protein YP_004211934.1 1264143 R 741091 CDS YP_004211935.1 322831908 10212185 1265068..1265283 1 NC_015061.1 KEGG: pct:PC1_0715 hypothetical protein; hypothetical protein 1265283 10212185 Rahaq_1185 Rahnella sp. Y9602 hypothetical protein YP_004211935.1 1265068 D 741091 CDS YP_004211936.1 322831909 10212186 complement(1265618..1268293) 1 NC_015061.1 KEGG: seh:SeHA_C2642 zinc-binding domain of primase-helicase family; PFAM: protein of unknown function DUF927; P4 alpha zinc-binding domain protein; TOPRIM domain-containing protein; SMART: P4 alpha zinc-binding domain protein; Toprim sub domain-containing protein; hypothetical protein 1268293 10212186 Rahaq_1186 Rahnella sp. Y9602 hypothetical protein YP_004211936.1 1265618 R 741091 CDS YP_004211937.1 322831910 10212187 complement(1268384..1269370) 1 NC_015061.1 PFAM: integrase family protein; KEGG: ecw:EcE24377A_0981 phage integrase family site specific recombinase; integrase family protein 1269370 10212187 Rahaq_1187 Rahnella sp. Y9602 integrase family protein YP_004211937.1 1268384 R 741091 CDS YP_004211938.1 322831911 10212188 complement(1269409..1269675) 1 NC_015061.1 KEGG: ses:SARI_03877 hypothetical protein; hypothetical protein 1269675 10212188 Rahaq_1188 Rahnella sp. Y9602 hypothetical protein YP_004211938.1 1269409 R 741091 CDS YP_004211939.1 322831912 10212189 complement(1269668..1269871) 1 NC_015061.1 KEGG: ypy:YPK_4167 hypothetical protein; hypothetical protein 1269871 10212189 Rahaq_1189 Rahnella sp. Y9602 hypothetical protein YP_004211939.1 1269668 R 741091 CDS YP_004211940.1 322831913 10212190 complement(1269886..1270368) 1 NC_015061.1 KEGG: eca:ECA2753 phage-related protein; hypothetical protein 1270368 10212190 Rahaq_1190 Rahnella sp. Y9602 hypothetical protein YP_004211940.1 1269886 R 741091 CDS YP_004211941.1 322831914 10212191 complement(1270326..1270544) 1 NC_015061.1 PFAM: Prophage CP4-57 regulatory; KEGG: set:SEN1998 phage regulatory protein; phage transcriptional regulator AlpA 1270544 10212191 Rahaq_1191 Rahnella sp. Y9602 phage transcriptional regulator AlpA YP_004211941.1 1270326 R 741091 CDS YP_004211942.1 322831915 10212192 complement(1270945..1272180) 1 NC_015061.1 PFAM: integrase family protein; KEGG: ecr:ECIAI1_4497 prophage integrase; integrase family protein 1272180 10212192 Rahaq_1192 Rahnella sp. Y9602 integrase family protein YP_004211942.1 1270945 R 741091 CDS YP_004211943.1 322831916 10212194 complement(1272523..1273440) 1 NC_015061.1 PFAM: formate/nitrite transporter; KEGG: spe:Spro_3392 inner membrane protein; formate/nitrite transporter 1273440 10212194 Rahaq_1193 Rahnella sp. Y9602 formate/nitrite transporter YP_004211943.1 1272523 R 741091 CDS YP_004211944.1 322831917 10212195 1273689..1274330 1 NC_015061.1 TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; KEGG: spe:Spro_3391 cytochrome c biogenesis protein CcmA; SMART: AAA ATPase; heme exporter protein CcmA 1274330 10212195 Rahaq_1194 Rahnella sp. Y9602 heme exporter protein CcmA YP_004211944.1 1273689 D 741091 CDS YP_004211945.1 322831918 10212196 1274352..1275011 1 NC_015061.1 KEGG: yen:YE1264 heme exporter protein B; TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; heme exporter protein CcmB 1275011 10212196 Rahaq_1195 Rahnella sp. Y9602 heme exporter protein CcmB YP_004211945.1 1274352 D 741091 CDS YP_004211946.1 322831919 10212197 1275229..1275966 1 NC_015061.1 KEGG: spe:Spro_3389 heme exporter protein CcmC; TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; heme exporter protein CcmC 1275966 10212197 Rahaq_1196 Rahnella sp. Y9602 heme exporter protein CcmC YP_004211946.1 1275229 D 741091 CDS YP_004211947.1 322831920 10212198 1275963..1276223 1 NC_015061.1 KEGG: spe:Spro_3388 heme exporter protein D (CcmD); TIGRFAM: heme exporter protein CcmD; PFAM: Heme exporter protein D (CcmD); heme exporter protein CcmD 1276223 10212198 Rahaq_1197 Rahnella sp. Y9602 heme exporter protein CcmD YP_004211947.1 1275963 D 741091 CDS YP_004211948.1 322831921 10212199 1276220..1276714 1 NC_015061.1 PFAM: CcmE/CycJ protein; KEGG: spe:Spro_3387 cytochrome c-type biogenesis protein CcmE; CcmE/CycJ protein 1276714 10212199 Rahaq_1198 Rahnella sp. Y9602 CcmE/CycJ protein YP_004211948.1 1276220 D 741091 CDS YP_004211949.1 322831922 10212200 1276711..1278684 1 NC_015061.1 KEGG: spe:Spro_3386 cytochrome c-type biogenesis protein CcmF; TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; cytochrome c-type biogenesis protein CcmF 1278684 10212200 Rahaq_1199 Rahnella sp. Y9602 cytochrome c-type biogenesis protein CcmF YP_004211949.1 1276711 D 741091 CDS YP_004211950.1 322831923 10212201 1278681..1279232 1 NC_015061.1 KEGG: spe:Spro_3385 periplasmic protein thiol--disulphide oxidoreductase DsbE; TIGRFAM: periplasmic protein thiol/disulphide oxidoreductase DsbE; PFAM: Redoxin domain protein; protein thiol/disulfide oxidoreductase DsbE 1279232 10212201 Rahaq_1200 Rahnella sp. Y9602 protein thiol/disulfide oxidoreductase DsbE YP_004211950.1 1278681 D 741091 CDS YP_004211951.1 322831924 10212202 1279229..1279714 1 NC_015061.1 PFAM: cytochrome C biogenesis protein; KEGG: spe:Spro_3384 cytochrome c biogenesis protein; cytochrome C biogenesis protein 1279714 10212202 Rahaq_1201 Rahnella sp. Y9602 cytochrome C biogenesis protein YP_004211951.1 1279229 D 741091 CDS YP_004211952.1 322831925 10212203 1279711..1280925 1 NC_015061.1 TIGRFAM: cytochrome c-type biogenesis protein CcmI; KEGG: spe:Spro_3383 TPR repeat-containing protein; cytochrome c-type biogenesis protein CcmI 1280925 10212203 Rahaq_1202 Rahnella sp. Y9602 cytochrome c-type biogenesis protein CcmI YP_004211952.1 1279711 D 741091 CDS YP_004211953.1 322831926 10212204 1280960..1281727 1 NC_015061.1 PFAM: VacJ family lipoprotein; KEGG: spe:Spro_3382 VacJ family lipoprotein; VacJ family lipoprotein 1281727 10212204 Rahaq_1203 Rahnella sp. Y9602 VacJ family lipoprotein YP_004211953.1 1280960 D 741091 CDS YP_004211954.1 322831927 10212205 complement(1281795..1283072) 1 NC_015061.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: yen:YE1274 long-chain fatty acid outer membrane transporter; aromatic hydrocarbon degradation membrane protein 1283072 10212205 Rahaq_1204 Rahnella sp. Y9602 aromatic hydrocarbon degradation membrane protein YP_004211954.1 1281795 R 741091 CDS YP_004211955.1 322831928 10212206 1283489..1283821 1 NC_015061.1 PFAM: Conserved hypothetical protein CHP00743; KEGG: dda:Dd703_2599 hypothetical protein; hypothetical protein 1283821 10212206 Rahaq_1205 Rahnella sp. Y9602 hypothetical protein YP_004211955.1 1283489 D 741091 CDS YP_004211956.1 322831929 10212207 1284141..1285454 1 NC_015061.1 TIGRFAM: acetyl-CoA C-acyltransferase FadI; acetyl-CoA acetyltransferase; KEGG: spe:Spro_3379 3-ketoacyl-CoA thiolase; PFAM: Thiolase-like; acetyl-CoA C-acyltransferase FadI 1285454 10212207 Rahaq_1206 Rahnella sp. Y9602 acetyl-CoA C-acyltransferase FadI YP_004211956.1 1284141 D 741091 CDS YP_004211957.1 322831930 10212208 1285451..1287652 1 NC_015061.1 KEGG: spe:Spro_3378 multifunctional fatty acid oxidation complex subunit alpha; TIGRFAM: fatty acid oxidation complex, subunit alpha FadJ; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; fatty acid oxidation complex, subunit alpha FadJ 1287652 10212208 Rahaq_1207 Rahnella sp. Y9602 fatty acid oxidation complex, subunit alpha FadJ YP_004211957.1 1285451 D 741091 CDS YP_004211958.1 322831931 10212209 1288081..1288569 1 NC_015061.1 KEGG: spe:Spro_3377 phosphohistidine phosphatase; TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; phosphohistidine phosphatase, SixA 1288569 10212209 Rahaq_1208 Rahnella sp. Y9602 phosphohistidine phosphatase, SixA YP_004211958.1 1288081 D 741091 CDS YP_004211959.1 322831932 10212210 complement(1288655..1289194) 1 NC_015061.1 KEGG: ebd:ECBD_1328 hypothetical protein; PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2; Smr protein/MutS2 1289194 10212210 Rahaq_1209 Rahnella sp. Y9602 Smr protein/MutS2 YP_004211959.1 1288655 R 741091 CDS YP_004211960.1 322831933 10212211 1289398..1290330 1 NC_015061.1 KEGG: spe:Spro_3375 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; TIGRFAM: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; modification methylase, HemK family; PFAM: methyltransferase small; protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 1290330 10212211 Rahaq_1210 Rahnella sp. Y9602 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific YP_004211960.1 1289398 D 741091 CDS YP_004211961.1 322831934 10212212 1290413..1291498 1 NC_015061.1 TIGRFAM: chorismate synthase; KEGG: spe:Spro_3374 chorismate synthase; PFAM: chorismate synthase; chorismate synthase 1291498 10212212 Rahaq_1211 Rahnella sp. Y9602 chorismate synthase YP_004211961.1 1290413 D 741091 CDS YP_004211962.1 322831935 10212213 1291507..1292358 1 NC_015061.1 PFAM: peptidase U6 penicillin-insensitive murein endopeptidase; KEGG: spe:Spro_3373 penicillin-insensitive murein endopeptidase; peptidase U6 penicillin-insensitive murein endopeptidase 1292358 10212213 Rahaq_1212 Rahnella sp. Y9602 peptidase U6 penicillin-insensitive murein endopeptidase YP_004211962.1 1291507 D 741091 CDS YP_004211963.1 322831936 10212214 1292404..1293204 1 NC_015061.1 PFAM: protein of unknown function DUF81; KEGG: spe:Spro_3372 hypothetical protein; hypothetical protein 1293204 10212214 Rahaq_1213 Rahnella sp. Y9602 hypothetical protein YP_004211963.1 1292404 D 741091 CDS YP_004211964.1 322831937 10212215 1293307..1293864 1 NC_015061.1 PFAM: protein of unknown function DUF462; KEGG: spe:Spro_3371 hypothetical protein; hypothetical protein 1293864 10212215 Rahaq_1214 Rahnella sp. Y9602 hypothetical protein YP_004211964.1 1293307 D 741091 CDS YP_004211965.1 322831938 10212216 1293889..1294167 1 NC_015061.1 PFAM: YfcL protein; KEGG: spe:Spro_3370 YfcL protein; hypothetical protein 1294167 10212216 Rahaq_1215 Rahnella sp. Y9602 hypothetical protein YP_004211965.1 1293889 D 741091 CDS YP_004211966.1 322831939 10212217 complement(1294241..1296271) 1 NC_015061.1 KEGG: spe:Spro_3369 5-methylaminomethyl-2-thiouridine methyltransferase; TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; PFAM: protein of unknown function DUF752; FAD dependent oxidoreductase; tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC 1296271 10212217 Rahaq_1216 Rahnella sp. Y9602 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC YP_004211966.1 1294241 R 741091 CDS YP_004211967.1 322831940 10212218 1296441..1297661 1 NC_015061.1 PFAM: Beta-ketoacyl synthase; KEGG: spe:Spro_3368 3-oxoacyl-(acyl carrier protein) synthase I; Beta-ketoacyl synthase 1297661 10212218 Rahaq_1217 Rahnella sp. Y9602 Beta-ketoacyl synthase YP_004211967.1 1296441 D 741091 CDS YP_004211968.1 322831941 10212219 1297893..1298378 1 NC_015061.1 KEGG: plu:plu3520 hypothetical protein; hypothetical protein 1298378 10212219 Rahaq_1218 Rahnella sp. Y9602 hypothetical protein YP_004211968.1 1297893 D 741091 CDS YP_004211969.1 322831942 10212220 1298464..1299936 1 NC_015061.1 KEGG: ebi:EbC_05650 iron-regulated membrane protein; iron-regulated membrane protein 1299936 10212220 Rahaq_1219 Rahnella sp. Y9602 iron-regulated membrane protein YP_004211969.1 1298464 D 741091 CDS YP_004211970.1 322831943 10212221 1299954..1301081 1 NC_015061.1 PFAM: Citrate transporter; KEGG: spe:Spro_3360 citrate transporter; citrate transporter 1301081 10212221 Rahaq_1220 Rahnella sp. Y9602 citrate transporter YP_004211970.1 1299954 D 741091 CDS YP_004211971.1 322831944 10212222 complement(1301074..1302639) 1 NC_015061.1 KEGG: eta:ETA_11630 regulatory protein GntR; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 1302639 10212222 Rahaq_1221 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004211971.1 1301074 R 741091 CDS YP_004211972.1 322831945 10212223 1302662..1303114 1 NC_015061.1 KEGG: ebi:EbC_31170 probable rhodanese-related sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; rhodanese domain-containing protein 1303114 10212223 Rahaq_1222 Rahnella sp. Y9602 rhodanese domain-containing protein YP_004211972.1 1302662 D 741091 CDS YP_004211973.1 322831946 10212224 complement(1303133..1304182) 1 NC_015061.1 KEGG: yen:YE1298 flagella biosynthesis regulator; flagella biosynthesis regulator, Flk 1304182 10212224 Rahaq_1223 Rahnella sp. Y9602 flagella biosynthesis regulator, Flk YP_004211973.1 1303133 R 741091 CDS YP_004211974.1 322831947 10212225 complement(1304437..1305333) 1 NC_015061.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: yen:YE1305 hypothetical protein; hypothetical protein 1305333 10212225 Rahaq_1224 Rahnella sp. Y9602 hypothetical protein YP_004211974.1 1304437 R 741091 CDS YP_004211975.1 322831948 10212226 1305462..1306253 1 NC_015061.1 KEGG: ypb:YPTS_2716 AraC family transcriptional regulator; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 1306253 10212226 Rahaq_1225 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004211975.1 1305462 D 741091 CDS YP_004211976.1 322831949 10212227 1306354..1307487 1 NC_015061.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: spe:Spro_3336 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 1307487 10212227 Rahaq_1226 Rahnella sp. Y9602 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_004211976.1 1306354 D 741091 CDS YP_004211977.1 322831950 10212228 1307599..1308609 1 NC_015061.1 KEGG: spe:Spro_3335 semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding; aspartate-semialdehyde dehydrogenase 1308609 10212228 Rahaq_1227 Rahnella sp. Y9602 aspartate-semialdehyde dehydrogenase YP_004211977.1 1307599 D 741091 CDS YP_004211978.1 322831951 10212229 1308612..1309442 1 NC_015061.1 KEGG: dda:Dd703_2576 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; tRNA pseudouridine synthase A 1309442 10212229 Rahaq_1228 Rahnella sp. Y9602 tRNA pseudouridine synthase A YP_004211978.1 1308612 D 741091 CDS YP_004211979.1 322831952 10212230 1309502..1310170 1 NC_015061.1 PFAM: SNARE associated Golgi protein; KEGG: spe:Spro_3333 hypothetical protein; hypothetical protein 1310170 10212230 Rahaq_1229 Rahnella sp. Y9602 hypothetical protein YP_004211979.1 1309502 D 741091 CDS YP_004211980.1 322831953 10212231 1310433..1311347 1 NC_015061.1 KEGG: spe:Spro_3332 acetyl-CoA carboxylase subunit beta; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, subunit beta; PFAM: carboxyl transferase; acetyl-CoA carboxylase, carboxyl transferase subunit beta 1311347 10212231 Rahaq_1230 Rahnella sp. Y9602 acetyl-CoA carboxylase, carboxyl transferase subunit beta YP_004211980.1 1310433 D 741091 CDS YP_004211981.1 322831954 10212232 1311536..1312822 1 NC_015061.1 KEGG: spe:Spro_3331 bifunctional folylpolyglutamate synthase/dihydrofolate synthase; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; bifunctional folylpolyglutamate synthase/dihydrofolate synthase 1312822 10212232 Rahaq_1231 Rahnella sp. Y9602 bifunctional folylpolyglutamate synthase/dihydrofolate synthase YP_004211981.1 1311536 D 741091 CDS YP_004211982.1 322831955 10212233 1312812..1313585 1 NC_015061.1 PFAM: Sporulation domain-containing protein; KEGG: spe:Spro_3330 hypothetical protein; sporulation domain-containing protein 1313585 10212233 Rahaq_1232 Rahnella sp. Y9602 sporulation domain-containing protein YP_004211982.1 1312812 D 741091 CDS YP_004211983.1 322831956 10212234 1313933..1314424 1 NC_015061.1 PFAM: Colicin V production protein; KEGG: pwa:Pecwa_1470 colicin V production protein; colicin V production protein 1314424 10212234 Rahaq_1233 Rahnella sp. Y9602 colicin V production protein YP_004211983.1 1313933 D 741091 CDS YP_004211984.1 322831957 10212235 1314455..1315972 1 NC_015061.1 KEGG: yen:YE1315 amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; amidophosphoribosyltransferase 1315972 10212235 Rahaq_1234 Rahnella sp. Y9602 amidophosphoribosyltransferase YP_004211984.1 1314455 D 741091 CDS YP_004211985.1 322831958 10212236 1316103..1316675 1 NC_015061.1 KEGG: spe:Spro_3327 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1316675 10212236 Rahaq_1235 Rahnella sp. Y9602 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_004211985.1 1316103 D 741091 CDS YP_004211986.1 322831959 10212237 1316998..1317780 1 NC_015061.1 TIGRFAM: cationic amino acid ABC transporter periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: spe:Spro_3326 cationic amino acid ABC transporter periplasmic binding protein; SMART: extracellular solute-binding protein family 3; cationic amino acid ABC transporter periplasmic binding protein 1317780 10212237 Rahaq_1236 Rahnella sp. Y9602 cationic amino acid ABC transporter periplasmic binding protein YP_004211986.1 1316998 D 741091 CDS YP_004211987.1 322831960 10212238 1317887..1318573 1 NC_015061.1 KEGG: spe:Spro_3325 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 1318573 10212238 Rahaq_1237 Rahnella sp. Y9602 polar amino acid ABC transporter inner membrane subunit YP_004211987.1 1317887 D 741091 CDS YP_004211988.1 322831961 10212239 1318570..1319283 1 NC_015061.1 KEGG: spe:Spro_3324 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 1319283 10212239 Rahaq_1238 Rahnella sp. Y9602 polar amino acid ABC transporter inner membrane subunit YP_004211988.1 1318570 D 741091 CDS YP_004211989.1 322831962 10212240 1319311..1320084 1 NC_015061.1 KEGG: spe:Spro_3323 histidine/lysine/arginine/ornithine transporter subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1320084 10212240 Rahaq_1239 Rahnella sp. Y9602 ABC transporter YP_004211989.1 1319311 D 741091 CDS YP_004211990.1 322831963 10212241 complement(1320139..1321371) 1 NC_015061.1 TIGRFAM: peptidase T; KEGG: bba:Bd2900 peptidase T; PFAM: peptidase dimerisation domain protein; peptidase M20; peptidase T 1321371 10212241 Rahaq_1240 Rahnella sp. Y9602 peptidase T YP_004211990.1 1320139 R 741091 CDS YP_004211991.1 322831964 10212242 1321531..1323126 1 NC_015061.1 PFAM: extracellular solute-binding protein family 5; KEGG: enc:ECL_02029 extracellular solute-binding protein; family 5 extracellular solute-binding protein 1323126 10212242 Rahaq_1241 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004211991.1 1321531 D 741091 CDS YP_004211992.1 322831965 10212243 complement(1323782..1324678) 1 NC_015061.1 PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; KEGG: spe:Spro_3322 hypothetical protein; hypothetical protein 1324678 10212243 Rahaq_1242 Rahnella sp. Y9602 hypothetical protein YP_004211992.1 1323782 R 741091 CDS YP_004211993.1 322831966 10212244 complement(1324821..1325450) 1 NC_015061.1 PFAM: Glutathione S-transferase domain; KEGG: spe:Spro_3320 glutathione S-transferase domain-containing protein; glutathione S-transferase 1325450 10212244 Rahaq_1243 Rahnella sp. Y9602 glutathione S-transferase YP_004211993.1 1324821 R 741091 CDS YP_004211994.1 322831967 10212245 1325767..1326399 1 NC_015061.1 PFAM: NUDIX hydrolase; KEGG: spe:Spro_3318 NUDIX hydrolase; NUDIX hydrolase 1326399 10212245 Rahaq_1244 Rahnella sp. Y9602 NUDIX hydrolase YP_004211994.1 1325767 D 741091 CDS YP_004211995.1 322831968 10212246 complement(1326438..1327454) 1 NC_015061.1 KEGG: enc:ECL_03647 LacI family transcription regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator 1327454 10212246 Rahaq_1245 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004211995.1 1326438 R 741091 CDS YP_004211996.1 322831969 10212247 1327809..1328252 1 NC_015061.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: cro:ROD_27051 PTS system EIIA component; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 1328252 10212247 Rahaq_1246 Rahnella sp. Y9602 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_004211996.1 1327809 D 741091 CDS YP_004211997.1 322831970 10212248 1328390..1328671 1 NC_015061.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: set:SEN2325 sugar phosphotransferase component II B; PTS system lactose/cellobiose-specific transporter subunit IIB 1328671 10212248 Rahaq_1247 Rahnella sp. Y9602 PTS system lactose/cellobiose-specific transporter subunit IIB YP_004211997.1 1328390 D 741091 CDS YP_004211998.1 322831971 10212249 1328722..1330098 1 NC_015061.1 KEGG: spq:SPAB_00632 PTS system ascorbate-specific transporter subunit IIC; PTS system ascorbate-specific transporter subunit IIC 1330098 10212249 Rahaq_1248 Rahnella sp. Y9602 PTS system ascorbate-specific transporter subunit IIC YP_004211998.1 1328722 D 741091 CDS YP_004211999.1 322831972 10212250 1330203..1331036 1 NC_015061.1 PFAM: Transketolase domain-containing protein; KEGG: cko:CKO_00492 hypothetical protein; transketolase 1331036 10212250 Rahaq_1249 Rahnella sp. Y9602 transketolase YP_004211999.1 1330203 D 741091 CDS YP_004212000.1 322831973 10212251 1331029..1331982 1 NC_015061.1 PFAM: Transketolase domain-containing protein; Transketolase central region; KEGG: cko:CKO_00493 hypothetical protein; transketolase 1331982 10212251 Rahaq_1250 Rahnella sp. Y9602 transketolase YP_004212000.1 1331029 D 741091 CDS YP_004212001.1 322831974 10212252 complement(1332077..1334236) 1 NC_015061.1 KEGG: ypb:YPTS_2692 phosphate acetyltransferase; TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; DRTGG domain protein; phosphate acetyltransferase 1334236 10212252 Rahaq_1251 Rahnella sp. Y9602 phosphate acetyltransferase YP_004212001.1 1332077 R 741091 CDS YP_004212002.1 322831975 10212253 complement(1334403..1335605) 1 NC_015061.1 KEGG: spe:Spro_3316 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; acetate kinase 1335605 10212253 Rahaq_1252 Rahnella sp. Y9602 acetate kinase YP_004212002.1 1334403 R 741091 CDS YP_004212003.1 322831976 10212254 1335709..1335897 1 NC_015061.1 hypothetical protein 1335897 10212254 Rahaq_1253 Rahnella sp. Y9602 hypothetical protein YP_004212003.1 1335709 D 741091 CDS YP_004212004.1 322831977 10212255 1336126..1336581 1 NC_015061.1 PFAM: protein of unknown function DUF412; KEGG: spe:Spro_3315 hypothetical protein; hypothetical protein 1336581 10212255 Rahaq_1254 Rahnella sp. Y9602 hypothetical protein YP_004212004.1 1336126 D 741091 CDS YP_004212005.1 322831978 10212256 1336777..1337271 1 NC_015061.1 PFAM: YfbU family protein; KEGG: yen:YE1336 hypothetical protein; hypothetical protein 1337271 10212256 Rahaq_1255 Rahnella sp. Y9602 hypothetical protein YP_004212005.1 1336777 D 741091 CDS YP_004212006.1 322831979 10212257 1337296..1337949 1 NC_015061.1 KEGG: spe:Spro_3313 phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 1337949 10212257 Rahaq_1256 Rahnella sp. Y9602 HAD-superfamily hydrolase YP_004212006.1 1337296 D 741091 CDS YP_004212007.1 322831980 10212258 1338268..1340100 1 NC_015061.1 PFAM: Citrate transporter; TrkA-C domain protein; KEGG: yen:YE1339 ion transport protein; citrate transporter 1340100 10212258 Rahaq_1257 Rahnella sp. Y9602 citrate transporter YP_004212007.1 1338268 D 741091 CDS YP_004212008.1 322831981 10212259 complement(1340109..1340708) 1 NC_015061.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: spe:Spro_3311 hypothetical protein; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 1340708 10212259 Rahaq_1258 Rahnella sp. Y9602 metal dependent phosphohydrolase YP_004212008.1 1340109 R 741091 CDS YP_004212009.1 322831982 10212260 complement(1340826..1342040) 1 NC_015061.1 PFAM: aminotransferase class I and II; KEGG: yen:YE1341 aminotransferase AlaT; class I and II aminotransferase 1342040 10212260 Rahaq_1259 Rahnella sp. Y9602 class I and II aminotransferase YP_004212009.1 1340826 R 741091 CDS YP_004212010.1 322831983 10212261 1343028..1343972 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3309 LysR family transcriptional regulator; LysR family transcriptional regulator 1343972 10212261 Rahaq_1260 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004212010.1 1343028 D 741091 CDS YP_004212011.1 322831984 10212262 1344677..1345120 1 NC_015061.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: spe:Spro_3308 NADH dehydrogenase subunit A; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 1345120 10212262 Rahaq_1261 Rahnella sp. Y9602 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 YP_004212011.1 1344677 D 741091 CDS YP_004212012.1 322831985 10212263 1345143..1345817 1 NC_015061.1 TIGRFAM: NADH-quinone oxidoreductase, B subunit; KEGG: etr:ETAE_2384 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductase; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; NADH-quinone oxidoreductase subunit B 1345817 10212263 Rahaq_1262 Rahnella sp. Y9602 NADH-quinone oxidoreductase subunit B YP_004212012.1 1345143 D 741091 CDS YP_004212013.1 322831986 10212264 1345907..1347706 1 NC_015061.1 KEGG: spe:Spro_3306 bifunctional NADH:ubiquinone oxidoreductase subunit C/D; TIGRFAM: NADH dehydrogenase I, D subunit; NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH dehydrogenase I subunit D 1347706 10212264 Rahaq_1263 Rahnella sp. Y9602 NADH dehydrogenase I subunit D YP_004212013.1 1345907 D 741091 CDS YP_004212014.1 322831987 10212265 1347709..1348245 1 NC_015061.1 KEGG: cko:CKO_00511 NADH dehydrogenase subunit E; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; NADH-quinone oxidoreductase subunit E 1348245 10212265 Rahaq_1264 Rahnella sp. Y9602 NADH-quinone oxidoreductase subunit E YP_004212014.1 1347709 D 741091 CDS YP_004212015.1 322831988 10212266 1348242..1349603 1 NC_015061.1 TIGRFAM: NADH-quinone oxidoreductase, F subunit; KEGG: yen:YE1348 NADH dehydrogenase I subunit F; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH-quinone oxidoreductase subunit F 1349603 10212266 Rahaq_1265 Rahnella sp. Y9602 NADH-quinone oxidoreductase subunit F YP_004212015.1 1348242 D 741091 CDS YP_004212016.1 322831989 10212267 1349747..1352473 1 NC_015061.1 KEGG: spe:Spro_3303 NADH dehydrogenase subunit G; TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; NADH-quinone oxidoreductase subunit G 1352473 10212267 Rahaq_1266 Rahnella sp. Y9602 NADH-quinone oxidoreductase subunit G YP_004212016.1 1349747 D 741091 CDS YP_004212017.1 322831990 10212268 1352470..1353447 1 NC_015061.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: yen:YE1350 NADH dehydrogenase subunit H; respiratory-chain NADH dehydrogenase subunit 1 1353447 10212268 Rahaq_1267 Rahnella sp. Y9602 respiratory-chain NADH dehydrogenase subunit 1 YP_004212017.1 1352470 D 741091 CDS YP_004212018.1 322831991 10212269 1353462..1354004 1 NC_015061.1 TIGRFAM: NADH-quinone oxidoreductase, chain I; KEGG: spe:Spro_3301 NADH dehydrogenase subunit I; NADH-quinone oxidoreductase subunit I 1354004 10212269 Rahaq_1268 Rahnella sp. Y9602 NADH-quinone oxidoreductase subunit I YP_004212018.1 1353462 D 741091 CDS YP_004212019.1 322831992 10212270 1354017..1354577 1 NC_015061.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: ypb:YPTS_2674 NADH dehydrogenase subunit J; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 1354577 10212270 Rahaq_1269 Rahnella sp. Y9602 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_004212019.1 1354017 D 741091 CDS YP_004212020.1 322831993 10212271 1354574..1354876 1 NC_015061.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: spe:Spro_3299 NADH dehydrogenase subunit K; NADH-ubiquinone oxidoreductase chain 4L 1354876 10212271 Rahaq_1270 Rahnella sp. Y9602 NADH-ubiquinone oxidoreductase chain 4L YP_004212020.1 1354574 D 741091 CDS YP_004212021.1 322831994 10212272 1354873..1356720 1 NC_015061.1 KEGG: spe:Spro_3298 NADH dehydrogenase subunit L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; proton-translocating NADH-quinone oxidoreductase subunit L 1356720 10212272 Rahaq_1271 Rahnella sp. Y9602 proton-translocating NADH-quinone oxidoreductase subunit L YP_004212021.1 1354873 D 741091 CDS YP_004212022.1 322831995 10212273 1356818..1358347 1 NC_015061.1 KEGG: spe:Spro_3297 NADH dehydrogenase subunit M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 1358347 10212273 Rahaq_1272 Rahnella sp. Y9602 proton-translocating NADH-quinone oxidoreductase subunit M YP_004212022.1 1356818 D 741091 CDS YP_004212023.1 322831996 10212274 1358354..1359814 1 NC_015061.1 KEGG: yen:YE1356 NADH dehydrogenase subunit N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase, chain N 1359814 10212274 Rahaq_1273 Rahnella sp. Y9602 proton-translocating NADH-quinone oxidoreductase, chain N YP_004212023.1 1358354 D 741091 CDS YP_004212024.1 322831997 10212275 1360007..1360522 1 NC_015061.1 PFAM: protein of unknown function DUF1097; KEGG: yen:YE1358 hypothetical protein; hypothetical protein 1360522 10212275 Rahaq_1274 Rahnella sp. Y9602 hypothetical protein YP_004212024.1 1360007 D 741091 CDS YP_004212025.1 322831998 10212276 1360635..1360943 1 NC_015061.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: epy:EpC_12740 hypothetical protein; hypothetical protein 1360943 10212276 Rahaq_1275 Rahnella sp. Y9602 hypothetical protein YP_004212025.1 1360635 D 741091 CDS YP_004212026.1 322831999 10212277 1361179..1362516 1 NC_015061.1 KEGG: ypp:YPDSF_1938 menaquinone-specific isochorismate synthase; TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like; isochorismate synthase 1362516 10212277 Rahaq_1276 Rahnella sp. Y9602 isochorismate synthase YP_004212026.1 1361179 D 741091 CDS YP_004212027.1 322832000 10212278 1362540..1364213 1 NC_015061.1 KEGG: spe:Spro_3283 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate synthase; TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 1364213 10212278 Rahaq_1277 Rahnella sp. Y9602 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase YP_004212027.1 1362540 D 741091 CDS YP_004212028.1 322832001 10212279 1364210..1365007 1 NC_015061.1 KEGG: eca:ECA1212 acyl-CoA thioester hydrolase YfbB; PFAM: alpha/beta hydrolase fold; 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 1365007 10212279 Rahaq_1278 Rahnella sp. Y9602 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase YP_004212028.1 1364210 D 741091 CDS YP_004212029.1 322832002 10212280 1364994..1365851 1 NC_015061.1 KEGG: yen:YE1377 naphthoate synthase; TIGRFAM: naphthoate synthase; PFAM: Enoyl-CoA hydratase/isomerase; naphthoate synthase 1365851 10212280 Rahaq_1279 Rahnella sp. Y9602 naphthoate synthase YP_004212029.1 1364994 D 741091 CDS YP_004212030.1 322832003 10212281 1365851..1366852 1 NC_015061.1 KEGG: eca:ECA1214 O-succinylbenzoate synthase; TIGRFAM: o-succinylbenzoic acid (OSB) synthetase; o-succinylbenzoic acid (OSB) synthetase 1366852 10212281 Rahaq_1280 Rahnella sp. Y9602 o-succinylbenzoic acid (OSB) synthetase YP_004212030.1 1365851 D 741091 CDS YP_004212031.1 322832004 10212282 1366837..1368210 1 NC_015061.1 KEGG: ddd:Dda3937_01785 O-succinylbenzoate-CoA ligase; TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; o-succinylbenzoate--CoA ligase 1368210 10212282 Rahaq_1281 Rahnella sp. Y9602 o-succinylbenzoate--CoA ligase YP_004212031.1 1366837 D 741091 CDS YP_004212032.1 322832005 10212283 complement(1368278..1369711) 1 NC_015061.1 KEGG: ypb:YPTS_1334 catalase domain-containing protein; PFAM: Catalase related subgroup; Catalase domain protein; catalase 1369711 10212283 Rahaq_1282 Rahnella sp. Y9602 catalase YP_004212032.1 1368278 R 741091 CDS YP_004212033.1 322832006 10212284 1370015..1370560 1 NC_015061.1 PFAM: YfaZ family protein; KEGG: cro:ROD_26631 hypothetical protein; hypothetical protein 1370560 10212284 Rahaq_1283 Rahnella sp. Y9602 hypothetical protein YP_004212033.1 1370015 D 741091 CDS YP_004212034.1 322832007 10212285 1370688..1371893 1 NC_015061.1 KEGG: spe:Spro_3275 competence damage-inducible protein A; TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; competence/damage-inducible protein CinA 1371893 10212285 Rahaq_1284 Rahnella sp. Y9602 competence/damage-inducible protein CinA YP_004212034.1 1370688 D 741091 CDS YP_004212035.1 322832008 10212286 complement(1372033..1372293) 1 NC_015061.1 PFAM: ferredoxin; KEGG: epy:EpC_12800 2Fe-2S ferredoxin YfaE; ferredoxin 1372293 10212286 Rahaq_1285 Rahnella sp. Y9602 ferredoxin YP_004212035.1 1372033 R 741091 CDS YP_004212036.1 322832009 10212287 complement(1372294..1373424) 1 NC_015061.1 KEGG: spe:Spro_3272 ribonucleotide-diphosphate reductase subunit beta; PFAM: ribonucleotide reductase; ribonucleoside-diphosphate reductase 1373424 10212287 Rahaq_1286 Rahnella sp. Y9602 ribonucleoside-diphosphate reductase YP_004212036.1 1372294 R 741091 CDS YP_004212037.1 322832010 10212288 complement(1373497..1375779) 1 NC_015061.1 KEGG: yen:YE1393 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, subunit alpha; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein; ATP-cone domain protein; ribonucleoside-diphosphate reductase subunit alpha 1375779 10212288 Rahaq_1287 Rahnella sp. Y9602 ribonucleoside-diphosphate reductase subunit alpha YP_004212037.1 1373497 R 741091 CDS YP_004212038.1 322832011 10212289 complement(1376224..1376445) 1 NC_015061.1 KEGG: cqu:CpipJ_CPIJ002807 hypothetical protein; hypothetical protein 1376445 10212289 Rahaq_1288 Rahnella sp. Y9602 hypothetical protein YP_004212038.1 1376224 R 741091 CDS YP_004212039.1 322832012 10212290 1376490..1380278 1 NC_015061.1 KEGG: efe:EFER_0932 adhesin; TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; polymorphic outer membrane protein; PFAM: Autotransporter beta- domain protein; Pertactin; Polymorphic membrane protein Chlamydia; outer membrane autotransporter barrel domain-containing protein 1380278 10212290 Rahaq_1289 Rahnella sp. Y9602 outer membrane autotransporter barrel domain-containing protein YP_004212039.1 1376490 D 741091 CDS YP_004212040.1 322832013 10212291 complement(1380346..1381068) 1 NC_015061.1 TIGRFAM: ubiquinone biosynthesis O-methyltransferase; KEGG: spe:Spro_3270 3-demethylubiquinone-9 3-methyltransferase; PFAM: methyltransferase type 11; ubiquinone biosynthesis O-methyltransferase 1381068 10212291 Rahaq_1290 Rahnella sp. Y9602 ubiquinone biosynthesis O-methyltransferase YP_004212040.1 1380346 R 741091 CDS YP_004212041.1 322832014 10212292 1381328..1383979 1 NC_015061.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA gyrase, A subunit; KEGG: spe:Spro_3269 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; DNA gyrase subunit A 1383979 10212292 Rahaq_1291 Rahnella sp. Y9602 DNA gyrase subunit A YP_004212041.1 1381328 D 741091 CDS YP_004212042.1 322832015 10212293 1384156..1387017 1 NC_015061.1 manually curated; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Signal transduction histidine kinase RcsC, alpha-beta loop-like; response regulator receiver; KEGG: spe:Spro_3268 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; integral membrane sensor hybrid histidine kinase 1387017 10212293 Rahaq_1292 Rahnella sp. Y9602 integral membrane sensor hybrid histidine kinase YP_004212042.1 1384156 D 741091 CDS YP_004212043.1 322832016 10212294 complement(1387094..1387744) 1 NC_015061.1 KEGG: ebi:EbC_30380 capsular synthesis regulator component B; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; LuxR family transcriptional regulator 1387744 10212294 Rahaq_1293 Rahnella sp. Y9602 LuxR family transcriptional regulator YP_004212043.1 1387094 R 741091 CDS YP_004212044.1 322832017 10212295 complement(1387749..1390442) 1 NC_015061.1 KEGG: spe:Spro_3266 phosphotransfer intermediate protein in two-component regulatory system with RcsBC; PFAM: ATP-binding region ATPase domain protein; Hpt domain protein; SMART: ATP-binding region ATPase domain protein; multi-sensor signal transduction histidine kinase 1390442 10212295 Rahaq_1294 Rahnella sp. Y9602 multi-sensor signal transduction histidine kinase YP_004212044.1 1387749 R 741091 CDS YP_004212045.1 322832018 10212296 1391313..1405112 1 NC_015061.1 SMART: PKD domain containing protein; KEGG: ebi:EbC_30340 hemagglutinin/hemolysin/adhesin-related protein; PKD domain-containing protein 1405112 10212296 Rahaq_1295 Rahnella sp. Y9602 PKD domain-containing protein YP_004212045.1 1391313 D 741091 CDS YP_004212046.1 322832019 10212297 1405249..1406625 1 NC_015061.1 KEGG: ebi:EbC_30330 type I secretion protein; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; TolC family type I secretion outer membrane protein 1406625 10212297 Rahaq_1296 Rahnella sp. Y9602 TolC family type I secretion outer membrane protein YP_004212046.1 1405249 D 741091 CDS YP_004212047.1 322832020 10212298 1406676..1408853 1 NC_015061.1 TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: ebi:EbC_30320 type I secretion protein, ATP-binding protein; SMART: AAA ATPase; type I secretion system ATPase 1408853 10212298 Rahaq_1297 Rahnella sp. Y9602 type I secretion system ATPase YP_004212047.1 1406676 D 741091 CDS YP_004212048.1 322832021 10212299 1408871..1410040 1 NC_015061.1 KEGG: ebi:EbC_30310 type I secretion membrane protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; HlyD family type I secretion membrane fusion protein 1410040 10212299 Rahaq_1298 Rahnella sp. Y9602 HlyD family type I secretion membrane fusion protein YP_004212048.1 1408871 D 741091 CDS YP_004212049.1 322832022 10212300 complement(1410679..1412667) 1 NC_015061.1 KEGG: pwa:Pecwa_0570 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein repeat-containing protein 1412667 10212300 Rahaq_1299 Rahnella sp. Y9602 Sel1 domain-containing protein repeat-containing protein YP_004212049.1 1410679 R 741091 CDS YP_004212050.1 322832023 10212301 1413442..1414569 1 NC_015061.1 PFAM: porin Gram-negative type; KEGG: spe:Spro_3264 outer membrane porin protein C; porin 1414569 10212301 Rahaq_1300 Rahnella sp. Y9602 porin YP_004212050.1 1413442 D 741091 CDS YP_004212051.1 322832024 10212302 complement(1414671..1415057) 1 NC_015061.1 KEGG: spe:Spro_2833 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 1415057 10212302 Rahaq_1301 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004212051.1 1414671 R 741091 CDS YP_004212052.1 322832025 10212303 complement(1415586..1417358) 1 NC_015061.1 KEGG: etr:ETAE_1324 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; peptidoglycan glycosyltransferase 1417358 10212303 Rahaq_1302 Rahnella sp. Y9602 peptidoglycan glycosyltransferase YP_004212052.1 1415586 R 741091 CDS YP_004212053.1 322832026 10212304 complement(1417578..1417820) 1 NC_015061.1 PFAM: DinI family protein; KEGG: dze:Dd1591_3349 DinI family protein; DinI family protein 1417820 10212304 Rahaq_1303 Rahnella sp. Y9602 DinI family protein YP_004212053.1 1417578 R 741091 CDS YP_004212054.1 322832027 10212305 complement(1417895..1418860) 1 NC_015061.1 KEGG: dda:Dd703_2708 glutathione transferase; glutathione transferase 1418860 10212305 Rahaq_1304 Rahnella sp. Y9602 glutathione transferase YP_004212054.1 1417895 R 741091 CDS YP_004212055.1 322832028 10212306 complement(1419054..1420835) 1 NC_015061.1 PFAM: sulfatase; KEGG: yen:YE1419 hypothetical protein; sulfatase 1420835 10212306 Rahaq_1305 Rahnella sp. Y9602 sulfatase YP_004212055.1 1419054 R 741091 CDS YP_004212056.1 322832029 10212307 complement(1420860..1421087) 1 NC_015061.1 PFAM: protein of unknown function DUF1414; KEGG: yen:YE1420 hypothetical protein; hypothetical protein 1421087 10212307 Rahaq_1306 Rahnella sp. Y9602 hypothetical protein YP_004212056.1 1420860 R 741091 CDS YP_004212057.1 322832030 10212308 1421410..1422414 1 NC_015061.1 PFAM: 37kDa nucleoid-associated protein; KEGG: ddc:Dd586_2386 37kDa nucleoid-associated protein; hypothetical protein 1422414 10212308 Rahaq_1307 Rahnella sp. Y9602 hypothetical protein YP_004212057.1 1421410 D 741091 CDS YP_004212058.1 322832031 10212309 complement(1422642..1422932) 1 NC_015061.1 PFAM: Ribosomal protein L25-like; KEGG: spe:Spro_3254 50S ribosomal protein L25; 50S ribosomal protein L25 1422932 10212309 Rahaq_1308 Rahnella sp. Y9602 50S ribosomal protein L25 YP_004212058.1 1422642 R 741091 CDS YP_004212059.1 322832032 10212310 complement(1423093..1424856) 1 NC_015061.1 KEGG: spe:Spro_3253 type III restriction protein res subunit; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; type III restriction protein res subunit 1424856 10212310 Rahaq_1309 Rahnella sp. Y9602 type III restriction protein res subunit YP_004212059.1 1423093 R 741091 CDS YP_004212060.1 322832033 10212311 1425189..1425896 1 NC_015061.1 KEGG: spe:Spro_3252 16S rRNA pseudouridylate synthase A; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; pseudouridine synthase 1425896 10212311 Rahaq_1310 Rahnella sp. Y9602 pseudouridine synthase YP_004212060.1 1425189 D 741091 CDS YP_004212061.1 322832034 10212312 1425924..1427129 1 NC_015061.1 KEGG: ypy:YPK_2792 bicyclomycin/multidrug efflux system; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; Bcr/CflA subfamily drug resistance transporter 1427129 10212312 Rahaq_1311 Rahnella sp. Y9602 Bcr/CflA subfamily drug resistance transporter YP_004212061.1 1425924 D 741091 CDS YP_004212062.1 322832035 10212313 complement(1427373..1428725) 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE1366 sugar transporter; major facilitator superfamily protein 1428725 10212313 Rahaq_1312 Rahnella sp. Y9602 major facilitator superfamily protein YP_004212062.1 1427373 R 741091 CDS YP_004212063.1 322832036 10212314 complement(1428901..1429884) 1 NC_015061.1 KEGG: ypb:YPTS_2664 LacI family transcription regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator 1429884 10212314 Rahaq_1313 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004212063.1 1428901 R 741091 CDS YP_004212064.1 322832037 10212315 1430090..1430854 1 NC_015061.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ypb:YPTS_2666 gluconate 5-dehydrogenase; short-chain dehydrogenase/reductase SDR 1430854 10212315 Rahaq_1314 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004212064.1 1430090 D 741091 CDS YP_004212065.1 322832038 10212316 1430863..1431606 1 NC_015061.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rhi:NGR_b20270 oxidoreductase; short-chain dehydrogenase/reductase SDR 1431606 10212316 Rahaq_1315 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004212065.1 1430863 D 741091 CDS YP_004212066.1 322832039 10212317 complement(1431668..1433071) 1 NC_015061.1 KEGG: yen:YE1369 dehydrogenase, cytochrome c subunit; PFAM: cytochrome c class I; gluconate 2-dehydrogenase (acceptor) 1433071 10212317 Rahaq_1316 Rahnella sp. Y9602 gluconate 2-dehydrogenase (acceptor) YP_004212066.1 1431668 R 741091 CDS YP_004212067.1 322832040 10212318 complement(1433068..1434723) 1 NC_015061.1 PFAM: FAD dependent oxidoreductase; KEGG: yen:YE1370 dehydrogenase subunit; FAD dependent oxidoreductase 1434723 10212318 Rahaq_1317 Rahnella sp. Y9602 FAD dependent oxidoreductase YP_004212067.1 1433068 R 741091 CDS YP_004212068.1 322832041 10212319 complement(1434723..1435340) 1 NC_015061.1 KEGG: yen:YE1370A dehydrogenase subunit; dehydrogenase subunit 1435340 10212319 Rahaq_1318 Rahnella sp. Y9602 dehydrogenase subunit YP_004212068.1 1434723 R 741091 CDS YP_004212069.1 322832042 10212320 1435993..1436361 1 NC_015061.1 KEGG: spe:Spro_3250 hypothetical protein; hypothetical protein 1436361 10212320 Rahaq_1319 Rahnella sp. Y9602 hypothetical protein YP_004212069.1 1435993 D 741091 CDS YP_004212070.1 322832043 10212321 complement(1436405..1438027) 1 NC_015061.1 KEGG: ddc:Dd586_2375 ABC transporter; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter 1438027 10212321 Rahaq_1320 Rahnella sp. Y9602 ABC transporter YP_004212070.1 1436405 R 741091 CDS YP_004212071.1 322832044 10212322 complement(1438029..1439072) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3248 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1439072 10212322 Rahaq_1321 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004212071.1 1438029 R 741091 CDS YP_004212072.1 322832045 10212323 complement(1439072..1440166) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3247 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1440166 10212323 Rahaq_1322 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004212072.1 1439072 R 741091 CDS YP_004212073.1 322832046 10212324 complement(1440177..1441982) 1 NC_015061.1 PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE1430 substrate-binding transport protein; family 5 extracellular solute-binding protein 1441982 10212324 Rahaq_1323 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004212073.1 1440177 R 741091 CDS YP_004212074.1 322832047 10212325 complement(1442177..1443859) 1 NC_015061.1 KEGG: spe:Spro_3245 hypothetical protein; PFAM: EAL domain protein; SMART: EAL domain protein; diguanylate phosphodiesterase 1443859 10212325 Rahaq_1324 Rahnella sp. Y9602 diguanylate phosphodiesterase YP_004212074.1 1442177 R 741091 CDS YP_004212075.1 322832048 10212326 complement(1443926..1444501) 1 NC_015061.1 PFAM: NLP/P60 protein; KEGG: spe:Spro_3244 outer membrane lipoprotein; NLP/P60 protein 1444501 10212326 Rahaq_1325 Rahnella sp. Y9602 NLP/P60 protein YP_004212075.1 1443926 R 741091 CDS YP_004212076.1 322832049 10212327 complement(1444929..1445642) 1 NC_015061.1 KEGG: spe:Spro_3242 phosphoesterase PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; phosphoesterase PA-phosphatase-like protein 1445642 10212327 Rahaq_1326 Rahnella sp. Y9602 phosphoesterase PA-phosphatase-like protein YP_004212076.1 1444929 R 741091 CDS YP_004212077.1 322832050 10212328 complement(1445703..1446677) 1 NC_015061.1 PFAM: cobalamin synthesis protein P47K; KEGG: spe:Spro_3241 cobalamin synthesis protein P47K; cobalamin synthesis protein P47K 1446677 10212328 Rahaq_1327 Rahnella sp. Y9602 cobalamin synthesis protein P47K YP_004212077.1 1445703 R 741091 CDS YP_004212078.1 322832051 10212329 1446892..1447203 1 NC_015061.1 KEGG: spe:Spro_3240 hypothetical protein; hypothetical protein 1447203 10212329 Rahaq_1328 Rahnella sp. Y9602 hypothetical protein YP_004212078.1 1446892 D 741091 CDS YP_004212079.1 322832052 10212330 1447453..1448184 1 NC_015061.1 KEGG: ypb:YPTS_1405 GntR domain-containing protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 1448184 10212330 Rahaq_1329 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004212079.1 1447453 D 741091 CDS YP_004212080.1 322832053 10212331 complement(1448245..1449714) 1 NC_015061.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: spe:Spro_3239 mannitol dehydrogenase domain-containing protein; mannitol dehydrogenase 1449714 10212331 Rahaq_1330 Rahnella sp. Y9602 mannitol dehydrogenase YP_004212080.1 1448245 R 741091 CDS YP_004212081.1 322832054 10212332 complement(1449966..1451288) 1 NC_015061.1 PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein; transposase IS4 family protein 1451288 10212332 Rahaq_1331 Rahnella sp. Y9602 transposase IS4 family protein YP_004212081.1 1449966 R 741091 CDS YP_004212082.1 322832055 10212333 complement(1451409..1451981) 1 NC_015061.1 KEGG: ddc:Dd586_2369 elongation factor P-like protein YeiP; TIGRFAM: elongation factor P-like protein YeiP; PFAM: Elongation factor P ; Elongation factor P/YeiP protein; Elongation factor KOW-like domain-containing protein; elongation factor P-like protein YeiP 1451981 10212333 Rahaq_1332 Rahnella sp. Y9602 elongation factor P-like protein YeiP YP_004212082.1 1451409 R 741091 CDS YP_004212083.1 322832056 10212334 1452226..1452480 1 NC_015061.1 PFAM: protein of unknown function UPF0153; KEGG: spe:Spro_3235 hypothetical protein; hypothetical protein 1452480 10212334 Rahaq_1333 Rahnella sp. Y9602 hypothetical protein YP_004212083.1 1452226 D 741091 CDS YP_004212084.1 322832057 10212335 complement(1452477..1453691) 1 NC_015061.1 manually curated; TIGRFAM: sugar efflux transporter; KEGG: spe:Spro_3234 sugar efflux transporter; PFAM: major facilitator superfamily MFS_1; sugar efflux transporter 1453691 10212335 Rahaq_1334 Rahnella sp. Y9602 sugar efflux transporter YP_004212084.1 1452477 R 741091 CDS YP_004212085.1 322832058 10212336 1454155..1455285 1 NC_015061.1 KEGG: spe:Spro_3230 bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphoryl transfer system HPr; HPr family phosphocarrier protein 1455285 10212336 Rahaq_1335 Rahnella sp. Y9602 HPr family phosphocarrier protein YP_004212085.1 1454155 D 741091 CDS YP_004212086.1 322832059 10212337 1455282..1456217 1 NC_015061.1 KEGG: spe:Spro_3229 1-phosphofructokinase; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; 1-phosphofructokinase 1456217 10212337 Rahaq_1336 Rahnella sp. Y9602 1-phosphofructokinase YP_004212086.1 1455282 D 741091 CDS YP_004212087.1 322832060 10212338 1456233..1457933 1 NC_015061.1 TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose-specific, IIB subunnit; KEGG: yen:YE1449 PTS system fructose-specific transporter subunits IIBC; PFAM: phosphotransferase system EIIC; PTS system fructose subfamily transporter subunit IIC 1457933 10212338 Rahaq_1337 Rahnella sp. Y9602 PTS system fructose subfamily transporter subunit IIC YP_004212087.1 1456233 D 741091 CDS YP_004212088.1 322832061 10212339 complement(1458040..1458906) 1 NC_015061.1 SMART: AP endonuclease family 2; TIGRFAM: apurinic endonuclease Apn1; KEGG: ebi:EbC_29990 endodeoxyribonuclease IV; PFAM: Xylose isomerase domain-containing protein TIM barrel; apurinic endonuclease Apn1 1458906 10212339 Rahaq_1338 Rahnella sp. Y9602 apurinic endonuclease Apn1 YP_004212088.1 1458040 R 741091 CDS YP_004212089.1 322832062 10212340 complement(1458997..1460103) 1 NC_015061.1 PFAM: Uncharacterised protein family UPF0324; KEGG: ypb:YPTS_1433 hypothetical protein; hypothetical protein 1460103 10212340 Rahaq_1339 Rahnella sp. Y9602 hypothetical protein YP_004212089.1 1458997 R 741091 CDS YP_004212090.1 322832063 10212341 1460292..1461164 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3225 DNA-binding transcriptional regulator; LysR family transcriptional regulator 1461164 10212341 Rahaq_1340 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004212090.1 1460292 D 741091 CDS YP_004212091.1 322832064 10212342 1461296..1462771 1 NC_015061.1 PFAM: amino acid permease-associated region; KEGG: spe:Spro_3224 lysine transporter; amino acid permease 1462771 10212342 Rahaq_1341 Rahnella sp. Y9602 amino acid permease YP_004212091.1 1461296 D 741091 CDS YP_004212092.1 322832065 10212343 1463005..1464087 1 NC_015061.1 PFAM: transport system permease protein; KEGG: ypb:YPTS_1438 transport system permease protein; transport system permease 1464087 10212343 Rahaq_1342 Rahnella sp. Y9602 transport system permease YP_004212092.1 1463005 D 741091 CDS YP_004212093.1 322832066 10212344 1464087..1464926 1 NC_015061.1 KEGG: spe:Spro_3221 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1464926 10212344 Rahaq_1343 Rahnella sp. Y9602 ABC transporter YP_004212093.1 1464087 D 741091 CDS YP_004212094.1 322832067 10212345 complement(1465120..1465926) 1 NC_015061.1 KEGG: ebi:EbC_05260 phytase; TIGRFAM: 5'-nucleotidase, lipoprotein e(P4) family; PFAM: acid phosphatase (Class B); 5'-nucleotidase 1465926 10212345 Rahaq_1344 Rahnella sp. Y9602 5'-nucleotidase YP_004212094.1 1465120 R 741091 CDS YP_004212095.1 322832068 10212346 complement(1466130..1467239) 1 NC_015061.1 PFAM: porin Gram-negative type; KEGG: esa:ESA_03112 hypothetical protein; porin 1467239 10212346 Rahaq_1345 Rahnella sp. Y9602 porin YP_004212095.1 1466130 R 741091 CDS YP_004212096.1 322832069 10212347 1467565..1469739 1 NC_015061.1 SMART: helicase c2; DEAD-like helicase; KEGG: spe:Spro_1461 ATP-dependent DNA helicase DinG; helicase c2 1469739 10212347 Rahaq_1346 Rahnella sp. Y9602 helicase c2 YP_004212096.1 1467565 D 741091 CDS YP_004212097.1 322832070 10212348 1469785..1470747 1 NC_015061.1 PFAM: Glycosyl transferase, family 3-like; KEGG: eca:ECA2772 glycosyl transferase family protein; glycosyl transferase family protein 1470747 10212348 Rahaq_1347 Rahnella sp. Y9602 glycosyl transferase family protein YP_004212097.1 1469785 D 741091 CDS YP_004212098.1 322832071 10212349 1471069..1471410 1 NC_015061.1 manually curated; TIGRFAM: alkylphosphonate utilization operon protein PhnA; KEGG: ddc:Dd586_0970 alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; alkylphosphonate utilization protein PhnA 1471410 10212349 Rahaq_1348 Rahnella sp. Y9602 alkylphosphonate utilization protein PhnA YP_004212098.1 1471069 D 741091 CDS YP_004212099.1 322832072 10212350 1471523..1473385 1 NC_015061.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: pct:PC1_1581 peptidase M3A and M3B thimet/oligopeptidase F; peptidase M3A and M3B thimet/oligopeptidase F 1473385 10212350 Rahaq_1349 Rahnella sp. Y9602 peptidase M3A and M3B thimet/oligopeptidase F YP_004212099.1 1471523 D 741091 CDS YP_004212100.1 322832073 10212351 complement(1473471..1474100) 1 NC_015061.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: sbn:Sbal195_3989 flavoprotein oxygenase; flavin reductase domain-containing FMN-binding protein 1474100 10212351 Rahaq_1350 Rahnella sp. Y9602 flavin reductase domain-containing FMN-binding protein YP_004212100.1 1473471 R 741091 CDS YP_004212101.1 322832074 10212352 1474307..1475275 1 NC_015061.1 KEGG: spe:Spro_1470 SAM-dependent methyltransferase; PFAM: protein of unknown function DUF890; rRNA (adenine-N(6)-)-methyltransferase 1475275 10212352 Rahaq_1351 Rahnella sp. Y9602 rRNA (adenine-N(6)-)-methyltransferase YP_004212101.1 1474307 D 741091 CDS YP_004212102.1 322832075 10212353 1475618..1476928 1 NC_015061.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: ypz:YPZ3_2157 chemotactic transducer; SMART: PAC repeat-containing protein; PAS domain containing protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 1476928 10212353 Rahaq_1352 Rahnella sp. Y9602 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor YP_004212102.1 1475618 D 741091 CDS YP_004212103.1 322832076 10212354 1477632..1477871 1 NC_015061.1 KEGG: pct:PC1_3272 hypothetical protein; hypothetical protein 1477871 10212354 Rahaq_1353 Rahnella sp. Y9602 hypothetical protein YP_004212103.1 1477632 D 741091 CDS YP_004212104.1 322832077 10212355 complement(1478229..1478951) 1 NC_015061.1 KEGG: pwa:Pecwa_2880 glutamine ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1478951 10212355 Rahaq_1354 Rahnella sp. Y9602 ABC transporter YP_004212104.1 1478229 R 741091 CDS YP_004212105.1 322832078 10212356 complement(1478948..1479607) 1 NC_015061.1 KEGG: yen:YE2846 glutamine ABC transporter permease protein; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 1479607 10212356 Rahaq_1355 Rahnella sp. Y9602 polar amino acid ABC transporter inner membrane subunit YP_004212105.1 1478948 R 741091 CDS YP_004212106.1 322832079 10212357 complement(1479716..1480459) 1 NC_015061.1 TIGRFAM: cationic amino acid ABC transporter periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: set:SEN0775 glutamine ABC transporter periplasmic protein; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; cationic amino acid ABC transporter periplasmic binding protein 1480459 10212357 Rahaq_1356 Rahnella sp. Y9602 cationic amino acid ABC transporter periplasmic binding protein YP_004212106.1 1479716 R 741091 CDS YP_004212107.1 322832080 10212358 complement(1480861..1481127) 1 NC_015061.1 KEGG: spe:Spro_1480 hypothetical protein; TraR/DksA family transcriptional regulator 1481127 10212358 Rahaq_1357 Rahnella sp. Y9602 TraR/DksA family transcriptional regulator YP_004212107.1 1480861 R 741091 CDS YP_004212108.1 322832081 10212359 1481550..1482713 1 NC_015061.1 KEGG: ebr:ECB_02815 capsule polysaccharide export inner-membrane protein KpsE; capsule polysaccharide export inner-membrane protein KpsE 1482713 10212359 Rahaq_1358 Rahnella sp. Y9602 capsule polysaccharide export inner-membrane protein KpsE YP_004212108.1 1481550 D 741091 CDS YP_004212109.1 322832082 10212360 1482768..1484444 1 NC_015061.1 PFAM: polysaccharide export protein; KEGG: ecq:ECED1_3595 polysialic acid transport protein precursor; polysaccharide export protein 1484444 10212360 Rahaq_1359 Rahnella sp. Y9602 polysaccharide export protein YP_004212109.1 1482768 D 741091 CDS YP_004212110.1 322832083 10212361 1484444..1486483 1 NC_015061.1 PFAM: Capsule polysaccharide biosynthesis protein; KEGG: ecc:c3690 KpsC protein; capsular polysaccharide biosynthesis protein 1486483 10212361 Rahaq_1360 Rahnella sp. Y9602 capsular polysaccharide biosynthesis protein YP_004212110.1 1484444 D 741091 CDS YP_004212111.1 322832084 10212362 1486531..1487802 1 NC_015061.1 PFAM: Capsule polysaccharide biosynthesis protein; KEGG: ecz:ECS88_3326 capsule polysaccharide export protein; capsular polysaccharide biosynthesis protein 1487802 10212362 Rahaq_1361 Rahnella sp. Y9602 capsular polysaccharide biosynthesis protein YP_004212111.1 1486531 D 741091 CDS YP_004212112.1 322832085 10212363 1487841..1488833 1 NC_015061.1 SMART: Parallel beta-helix repeat; KEGG: rme:Rmet_5725 hypothetical protein; Parallel beta-helix repeat 1488833 10212363 Rahaq_1362 Rahnella sp. Y9602 Parallel beta-helix repeat YP_004212112.1 1487841 D 741091 CDS YP_004212113.1 322832086 10212364 1488863..1490083 1 NC_015061.1 KEGG: ctu:Ctu_06110 hypothetical protein; hypothetical protein 1490083 10212364 Rahaq_1363 Rahnella sp. Y9602 hypothetical protein YP_004212113.1 1488863 D 741091 CDS YP_004212114.1 322832087 10212365 complement(1490125..1491813) 1 NC_015061.1 KEGG: sna:Snas_5672 UDP-N-acetylglucosamine--lysosomal-enzyme N-acetylglucosamine phosphotransferase; UDP-N-acetylglucosamine--lysosomal-enzymeN- acetylglucosaminephosphotransferase 1491813 10212365 Rahaq_1364 Rahnella sp. Y9602 UDP-N-acetylglucosamine--lysosomal-enzymeN- acetylglucosaminephosphotransferase YP_004212114.1 1490125 R 741091 CDS YP_004212115.1 322832088 10212366 complement(1491761..1492873) 1 NC_015061.1 PFAM: glycosyl transferase group 1; KEGG: ttu:TERTU_0695 glycosyltransferase family 4 domain protein; group 1 glycosyl transferase 1492873 10212366 Rahaq_1365 Rahnella sp. Y9602 group 1 glycosyl transferase YP_004212115.1 1491761 R 741091 CDS YP_004212116.1 322832089 10212367 complement(1492936..1494027) 1 NC_015061.1 KEGG: ctu:Ctu_06090 capsular polysaccharide phosphotransferase LcbA; capsular polysaccharide phosphotransferase LcbA 1494027 10212367 Rahaq_1366 Rahnella sp. Y9602 capsular polysaccharide phosphotransferase LcbA YP_004212116.1 1492936 R 741091 CDS YP_004212117.1 322832090 10212368 complement(1494135..1494800) 1 NC_015061.1 KEGG: ecc:c3697 KpsT protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1494800 10212368 Rahaq_1367 Rahnella sp. Y9602 ABC transporter YP_004212117.1 1494135 R 741091 CDS YP_004212118.1 322832091 10212369 complement(1494797..1495573) 1 NC_015061.1 PFAM: ABC transporter; KEGG: eum:ECUMN_3434 polysialic acid transport protein; ABC transporter 1495573 10212369 Rahaq_1368 Rahnella sp. Y9602 ABC transporter YP_004212118.1 1494797 R 741091 CDS YP_004212119.1 322832092 10212370 complement(1496196..1496699) 1 NC_015061.1 PFAM: Ferritin Dps family protein; KEGG: spe:Spro_1481 DNA starvation/stationary phase protection protein Dps; ferritin Dps family protein 1496699 10212370 Rahaq_1369 Rahnella sp. Y9602 ferritin Dps family protein YP_004212119.1 1496196 R 741091 CDS YP_004212120.1 322832093 10212371 complement(1497114..1497791) 1 NC_015061.1 PFAM: Anti-sigma K factor RskA; KEGG: yen:YE2841 hypothetical protein; anti-sigma K factor RskA 1497791 10212371 Rahaq_1370 Rahnella sp. Y9602 anti-sigma K factor RskA YP_004212120.1 1497114 R 741091 CDS YP_004212121.1 322832094 10212372 complement(1497788..1498369) 1 NC_015061.1 KEGG: yen:YE2840 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 1498369 10212372 Rahaq_1371 Rahnella sp. Y9602 ECF subfamily RNA polymerase sigma-24 subunit YP_004212121.1 1497788 R 741091 CDS YP_004212122.1 322832095 10212373 complement(1498435..1498998) 1 NC_015061.1 KEGG: yen:YE2839 hypothetical protein; PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin; beta-Ig-H3/fasciclin 1498998 10212373 Rahaq_1372 Rahnella sp. Y9602 beta-Ig-H3/fasciclin YP_004212122.1 1498435 R 741091 CDS YP_004212123.1 322832096 10212374 1499093..1499248 1 NC_015061.1 hypothetical protein 1499248 10212374 Rahaq_1373 Rahnella sp. Y9602 hypothetical protein YP_004212123.1 1499093 D 741091 CDS YP_004212124.1 322832097 10212375 complement(1499174..1500160) 1 NC_015061.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: cko:CKO_02307 threonine and homoserine efflux system; hypothetical protein 1500160 10212375 Rahaq_1374 Rahnella sp. Y9602 hypothetical protein YP_004212124.1 1499174 R 741091 CDS YP_004212125.1 322832098 10212376 1500560..1501093 1 NC_015061.1 PFAM: virulence-related outer membrane protein; KEGG: cko:CKO_02304 outer membrane protein X; virulence-related outer membrane protein 1501093 10212376 Rahaq_1375 Rahnella sp. Y9602 virulence-related outer membrane protein YP_004212125.1 1500560 D 741091 CDS YP_004212126.1 322832099 10212377 complement(1501175..1501939) 1 NC_015061.1 PFAM: oxidoreductase molybdopterin binding; KEGG: ebi:EbC_44120 oxidoreductase, molybdopterin binding; oxidoreductase molybdopterin binding protein 1501939 10212377 Rahaq_1376 Rahnella sp. Y9602 oxidoreductase molybdopterin binding protein YP_004212126.1 1501175 R 741091 CDS YP_004212127.1 322832100 10212378 complement(1501932..1502573) 1 NC_015061.1 KEGG: ebi:EbC_44130 conserved uncharacterized protein; hypothetical protein 1502573 10212378 Rahaq_1377 Rahnella sp. Y9602 hypothetical protein YP_004212127.1 1501932 R 741091 CDS YP_004212128.1 322832101 10212379 complement(1502600..1503223) 1 NC_015061.1 KEGG: ebi:EbC_44140 hypothetical protein; hypothetical protein 1503223 10212379 Rahaq_1378 Rahnella sp. Y9602 hypothetical protein YP_004212128.1 1502600 R 741091 CDS YP_004212129.1 322832102 10212380 1503437..1504111 1 NC_015061.1 TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; KEGG: ddd:Dda3937_00228 DNA-binding heavy metal response regulator; SMART: response regulator receiver; two component heavy metal response transcriptional regulator, winged helix family 1504111 10212380 Rahaq_1379 Rahnella sp. Y9602 two component heavy metal response transcriptional regulator, winged helix family YP_004212129.1 1503437 D 741091 CDS YP_004212130.1 322832103 10212381 1504143..1505540 1 NC_015061.1 TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: spe:Spro_1499 heavy metal sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; heavy metal sensor signal transduction histidine kinase 1505540 10212381 Rahaq_1380 Rahnella sp. Y9602 heavy metal sensor signal transduction histidine kinase YP_004212130.1 1504143 D 741091 CDS YP_004212131.1 322832104 10212382 1505773..1507449 1 NC_015061.1 PFAM: sulfatase; KEGG: spe:Spro_1859 phosphoethanolamine transferase; sulfatase 1507449 10212382 Rahaq_1381 Rahnella sp. Y9602 sulfatase YP_004212131.1 1505773 D 741091 CDS YP_004212132.1 322832105 10212383 1507591..1508703 1 NC_015061.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: spe:Spro_3057 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 1508703 10212383 Rahaq_1382 Rahnella sp. Y9602 endonuclease/exonuclease/phosphatase YP_004212132.1 1507591 D 741091 CDS YP_004212133.1 322832106 10212384 1508706..1509620 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pfo:Pfl01_2358 LysR family transcriptional regulator; LysR family transcriptional regulator 1509620 10212384 Rahaq_1383 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004212133.1 1508706 D 741091 CDS YP_004212134.1 322832107 10212385 complement(1509627..1510235) 1 NC_015061.1 KEGG: avn:Avin_09800 3-isopropylmalate dehydratase small subunit LeuD2; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain-containing protein; 3-isopropylmalate dehydratase small subunit 1510235 10212385 Rahaq_1384 Rahnella sp. Y9602 3-isopropylmalate dehydratase small subunit YP_004212134.1 1509627 R 741091 CDS YP_004212135.1 322832108 10212386 complement(1510245..1511651) 1 NC_015061.1 KEGG: avn:Avin_09810 isopropylmalate isomerase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain-containing protein; 3-isopropylmalate dehydratase large subunit 1511651 10212386 Rahaq_1385 Rahnella sp. Y9602 3-isopropylmalate dehydratase large subunit YP_004212135.1 1510245 R 741091 CDS YP_004212136.1 322832109 10212387 1511822..1512697 1 NC_015061.1 PFAM: alpha/beta hydrolase fold; KEGG: avn:Avin_09470 alpha/beta hydrolase fold protein; alpha/beta hydrolase 1512697 10212387 Rahaq_1386 Rahnella sp. Y9602 alpha/beta hydrolase YP_004212136.1 1511822 D 741091 CDS YP_004212137.1 322832110 10212388 complement(1512752..1514806) 1 NC_015061.1 KEGG: spe:Spro_1512 choline transport protein BetT; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; choline/carnitine/betaine transporter 1514806 10212388 Rahaq_1387 Rahnella sp. Y9602 choline/carnitine/betaine transporter YP_004212137.1 1512752 R 741091 CDS YP_004212138.1 322832111 10212389 1515043..1515642 1 NC_015061.1 KEGG: ypb:YPTS_1277 transcriptional regulator BetI; TIGRFAM: transcriptional repressor BetI; PFAM: regulatory protein TetR; BetI family transcriptional regulator 1515642 10212389 Rahaq_1388 Rahnella sp. Y9602 BetI family transcriptional regulator YP_004212138.1 1515043 D 741091 CDS YP_004212139.1 322832112 10212390 1515687..1517156 1 NC_015061.1 KEGG: spe:Spro_1514 betaine aldehyde dehydrogenase; TIGRFAM: betaine aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; betaine aldehyde dehydrogenase 1517156 10212390 Rahaq_1389 Rahnella sp. Y9602 betaine aldehyde dehydrogenase YP_004212139.1 1515687 D 741091 CDS YP_004212140.1 322832113 10212391 1517180..1518865 1 NC_015061.1 KEGG: spe:Spro_1515 choline dehydrogenase; TIGRFAM: choline dehydrogenase; PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; choline dehydrogenase 1518865 10212391 Rahaq_1390 Rahnella sp. Y9602 choline dehydrogenase YP_004212140.1 1517180 D 741091 CDS YP_004212141.1 322832114 10212392 1518956..1519414 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: kpu:KP1_3906 transferase; N-acetyltransferase GCN5 1519414 10212392 Rahaq_1391 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004212141.1 1518956 D 741091 CDS YP_004212142.1 322832115 10212393 complement(1519602..1520534) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pfl:PFL_2263 LysR substrate binding domain-containing protein; LysR family transcriptional regulator 1520534 10212393 Rahaq_1392 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004212142.1 1519602 R 741091 CDS YP_004212143.1 322832116 10212394 1520636..1521070 1 NC_015061.1 PFAM: protein of unknown function DUF606; KEGG: enc:ECL_02097 hypothetical protein; hypothetical protein 1521070 10212394 Rahaq_1393 Rahnella sp. Y9602 hypothetical protein YP_004212143.1 1520636 D 741091 CDS YP_004212144.1 322832117 10212395 1521074..1521526 1 NC_015061.1 PFAM: protein of unknown function DUF606; KEGG: esa:ESA_02965 hypothetical protein; hypothetical protein 1521526 10212395 Rahaq_1394 Rahnella sp. Y9602 hypothetical protein YP_004212144.1 1521074 D 741091 CDS YP_004212145.1 322832118 10212396 complement(1521554..1522012) 1 NC_015061.1 PFAM: RES domain protein; KEGG: ypi:YpsIP31758_1792 hypothetical protein; RES domain-containing protein 1522012 10212396 Rahaq_1395 Rahnella sp. Y9602 RES domain-containing protein YP_004212145.1 1521554 R 741091 CDS YP_004212146.1 322832119 10212397 complement(1522009..1522470) 1 NC_015061.1 KEGG: yen:YE2115 hypothetical protein; hypothetical protein 1522470 10212397 Rahaq_1396 Rahnella sp. Y9602 hypothetical protein YP_004212146.1 1522009 R 741091 CDS YP_004212147.1 322832120 10212398 1522821..1523708 1 NC_015061.1 KEGG: enc:ECL_01169 nucleoside-specific channel-forming protein Tsx; manually curated; PFAM: Nucleoside-specific channel-forming protein, Tsx-like; Nucleoside-specific channel-forming protein, Tsx-like protein 1523708 10212398 Rahaq_1397 Rahnella sp. Y9602 Nucleoside-specific channel-forming protein, Tsx-like protein YP_004212147.1 1522821 D 741091 CDS YP_004212148.1 322832121 10212399 1523895..1525490 1 NC_015061.1 KEGG: spe:Spro_1545 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1525490 10212399 Rahaq_1398 Rahnella sp. Y9602 ABC transporter YP_004212148.1 1523895 D 741091 CDS YP_004212149.1 322832122 10212400 complement(1525684..1526445) 1 NC_015061.1 KEGG: spe:Spro_1546 molybdopterin biosynthesis protein MoeB; TIGRFAM: molybdopterin synthase sulfurylase MoeB; PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; molybdopterin synthase sulfurylase MoeB 1526445 10212400 Rahaq_1399 Rahnella sp. Y9602 molybdopterin synthase sulfurylase MoeB YP_004212149.1 1525684 R 741091 CDS YP_004212150.1 322832123 10212401 complement(1526448..1527689) 1 NC_015061.1 KEGG: spe:Spro_1547 molybdopterin biosynthesis protein MoeA; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV; molybdenum cofactor synthesis domain-containing protein 1527689 10212401 Rahaq_1400 Rahnella sp. Y9602 molybdenum cofactor synthesis domain-containing protein YP_004212150.1 1526448 R 741091 CDS YP_004212151.1 322832124 10212402 1527935..1528168 1 NC_015061.1 KEGG: etr:ETAE_0287 L-fucose operon activator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator 1528168 10212402 Rahaq_1401 Rahnella sp. Y9602 DeoR family transcriptional regulator YP_004212151.1 1527935 D 741091 CDS YP_004212152.1 322832125 10212403 1528285..1529289 1 NC_015061.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ddd:Dda3937_00500 ISEch4 transposase; transposase IS116/IS110/IS902 family protein 1529289 10212403 Rahaq_1402 Rahnella sp. Y9602 transposase IS116/IS110/IS902 family protein YP_004212152.1 1528285 D 741091 CDS YP_004212153.1 322832126 10212404 complement(1529596..1532547) 1 NC_015061.1 KEGG: yen:YE4059 autotransporter protein; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; Pertactin; outer membrane autotransporter barrel domain-containing protein 1532547 10212404 Rahaq_1403 Rahnella sp. Y9602 outer membrane autotransporter barrel domain-containing protein YP_004212153.1 1529596 R 741091 CDS YP_004212154.1 322832127 10212405 complement(1532818..1534017) 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: etr:ETAE_2780 hypothetical protein; major facilitator superfamily protein 1534017 10212405 Rahaq_1404 Rahnella sp. Y9602 major facilitator superfamily protein YP_004212154.1 1532818 R 741091 CDS YP_004212155.1 322832128 10212406 1534295..1535299 1 NC_015061.1 KEGG: ebi:EbC_14450 L-asparaginase; PFAM: peptidase T2 asparaginase 2; Beta-aspartyl-peptidase 1535299 10212406 Rahaq_1405 Rahnella sp. Y9602 Beta-aspartyl-peptidase YP_004212155.1 1534295 D 741091 CDS YP_004212156.1 322832129 10212407 1535296..1537164 1 NC_015061.1 KEGG: ebi:EbC_14460 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter 1537164 10212407 Rahaq_1406 Rahnella sp. Y9602 ABC transporter YP_004212156.1 1535296 D 741091 CDS YP_004212157.1 322832130 10212408 1537237..1538793 1 NC_015061.1 PFAM: extracellular solute-binding protein family 5; KEGG: spe:Spro_1551 extracellular solute-binding protein; family 5 extracellular solute-binding protein 1538793 10212408 Rahaq_1407 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004212157.1 1537237 D 741091 CDS YP_004212158.1 322832131 10212409 1538902..1539822 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_1552 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1539822 10212409 Rahaq_1408 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004212158.1 1538902 D 741091 CDS YP_004212159.1 322832132 10212410 1539831..1540751 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_1553 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1540751 10212410 Rahaq_1409 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004212159.1 1539831 D 741091 CDS YP_004212160.1 322832133 10212411 complement(1540815..1541672) 1 NC_015061.1 TIGRFAM: S-formylglutathione hydrolase; KEGG: spe:Spro_1556 S-formylglutathione hydrolase; PFAM: esterase; S-formylglutathione hydrolase 1541672 10212411 Rahaq_1410 Rahnella sp. Y9602 S-formylglutathione hydrolase YP_004212160.1 1540815 R 741091 CDS YP_004212161.1 322832134 10212412 complement(1541684..1542808) 1 NC_015061.1 KEGG: spe:Spro_1557 S-(hydroxymethyl)glutathione dehydrogenase; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 1542808 10212412 Rahaq_1411 Rahnella sp. Y9602 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase YP_004212161.1 1541684 R 741091 CDS YP_004212162.1 322832135 10212413 complement(1542852..1543781) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_1558 LysR family transcriptional regulator; LysR family transcriptional regulator 1543781 10212413 Rahaq_1412 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004212162.1 1542852 R 741091 CDS YP_004212163.1 322832136 10212414 1543980..1545107 1 NC_015061.1 KEGG: yen:YE2819 hypothetical protein; hypothetical protein 1545107 10212414 Rahaq_1413 Rahnella sp. Y9602 hypothetical protein YP_004212163.1 1543980 D 741091 CDS YP_004212164.1 322832137 10212415 1545233..1545898 1 NC_015061.1 TIGRFAM: GTP cyclohydrolase I; KEGG: pwa:Pecwa_1941 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; GTP cyclohydrolase I 1545898 10212415 Rahaq_1414 Rahnella sp. Y9602 GTP cyclohydrolase I YP_004212164.1 1545233 D 741091 CDS YP_004212165.1 322832138 10212416 1546074..1547228 1 NC_015061.1 PFAM: protein of unknown function DUF418; KEGG: yen:YE2817 hypothetical protein; hypothetical protein 1547228 10212416 Rahaq_1415 Rahnella sp. Y9602 hypothetical protein YP_004212165.1 1546074 D 741091 CDS YP_004212166.1 322832139 10212417 1547396..1547515 1 NC_015061.1 hypothetical protein 1547515 10212417 Rahaq_1416 Rahnella sp. Y9602 hypothetical protein YP_004212166.1 1547396 D 741091 CDS YP_004212167.1 322832140 10212418 1547499..1548530 1 NC_015061.1 KEGG: spe:Spro_1562 DNA-binding transcriptional regulator GalS; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator 1548530 10212418 Rahaq_1417 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004212167.1 1547499 D 741091 CDS YP_004212168.1 322832141 10212419 1548781..1549779 1 NC_015061.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE2815 galactose-binding protein; LacI family transcriptional regulator 1549779 10212419 Rahaq_1418 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004212168.1 1548781 D 741091 CDS YP_004212169.1 322832142 10212420 1550006..1551538 1 NC_015061.1 KEGG: yen:YE2814 galactose/methyl galaxtoside transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1551538 10212420 Rahaq_1419 Rahnella sp. Y9602 ABC transporter YP_004212169.1 1550006 D 741091 CDS YP_004212170.1 322832143 10212421 1551557..1552567 1 NC_015061.1 PFAM: inner-membrane translocator; KEGG: yen:YE2813 beta-methylgalactoside transporter inner membrane component; inner-membrane translocator 1552567 10212421 Rahaq_1420 Rahnella sp. Y9602 inner-membrane translocator YP_004212170.1 1551557 D 741091 CDS YP_004212171.1 322832144 10212422 complement(1552707..1553630) 1 NC_015061.1 PFAM: protein of unknown function DUF218; KEGG: spe:Spro_1566 hypothetical protein; hypothetical protein 1553630 10212422 Rahaq_1421 Rahnella sp. Y9602 hypothetical protein YP_004212171.1 1552707 R 741091 CDS YP_004212172.1 322832145 10212423 complement(1553857..1555554) 1 NC_015061.1 PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: spe:Spro_1567 malate dehydrogenase; malic protein NAD-binding protein 1555554 10212423 Rahaq_1422 Rahnella sp. Y9602 malic protein NAD-binding protein YP_004212172.1 1553857 R 741091 CDS YP_004212173.1 322832146 10212424 complement(1555713..1556603) 1 NC_015061.1 TIGRFAM: cytidine deaminase; KEGG: spe:Spro_1568 cytidine deaminase; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding domain protein; CMP/dCMP deaminase zinc-binding; cytidine deaminase 1556603 10212424 Rahaq_1423 Rahnella sp. Y9602 cytidine deaminase YP_004212173.1 1555713 R 741091 CDS YP_004212174.1 322832147 10212425 complement(1556771..1557505) 1 NC_015061.1 TIGRFAM: cationic amino acid ABC transporter periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: ddc:Dd586_2318 cationic amino acid ABC transporter periplasmic binding protein; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; cationic amino acid ABC transporter periplasmic binding protein 1557505 10212425 Rahaq_1424 Rahnella sp. Y9602 cationic amino acid ABC transporter periplasmic binding protein YP_004212174.1 1556771 R 741091 CDS YP_004212175.1 322832148 10212426 complement(1557733..1558401) 1 NC_015061.1 KEGG: ypy:YPK_2713 arginine transporter permease subunit ArtM; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 1558401 10212426 Rahaq_1425 Rahnella sp. Y9602 polar amino acid ABC transporter inner membrane subunit YP_004212175.1 1557733 R 741091 CDS YP_004212176.1 322832149 10212427 complement(1558401..1559117) 1 NC_015061.1 KEGG: spe:Spro_1654 arginine transporter permease subunit ArtQ; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 1559117 10212427 Rahaq_1426 Rahnella sp. Y9602 polar amino acid ABC transporter inner membrane subunit YP_004212176.1 1558401 R 741091 CDS YP_004212177.1 322832150 10212428 complement(1559130..1559861) 1 NC_015061.1 TIGRFAM: cationic amino acid ABC transporter periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: yen:YE1495 arginine-binding periplasmic protein 1 precursor; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; cationic amino acid ABC transporter periplasmic binding protein 1559861 10212428 Rahaq_1427 Rahnella sp. Y9602 cationic amino acid ABC transporter periplasmic binding protein YP_004212177.1 1559130 R 741091 CDS YP_004212178.1 322832151 10212429 complement(1559909..1560658) 1 NC_015061.1 KEGG: ypy:YPK_2710 arginine transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1560658 10212429 Rahaq_1428 Rahnella sp. Y9602 ABC transporter YP_004212178.1 1559909 R 741091 CDS YP_004212179.1 322832152 10212430 complement(1560848..1561429) 1 NC_015061.1 KEGG: spe:Spro_1657 lipoprotein; lipoprotein 1561429 10212430 Rahaq_1429 Rahnella sp. Y9602 lipoprotein YP_004212179.1 1560848 R 741091 CDS YP_004212180.1 322832153 10212431 1561617..1561943 1 NC_015061.1 PFAM: protein of unknown function DUF74; KEGG: spe:Spro_1658 hypothetical protein; hypothetical protein 1561943 10212431 Rahaq_1430 Rahnella sp. Y9602 hypothetical protein YP_004212180.1 1561617 D 741091 CDS YP_004212181.1 322832154 10212432 1561940..1562788 1 NC_015061.1 KEGG: spe:Spro_1659 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 1562788 10212432 Rahaq_1431 Rahnella sp. Y9602 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD YP_004212181.1 1561940 D 741091 CDS YP_004212182.1 322832155 10212433 complement(1562811..1563845) 1 NC_015061.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: yen:YE1503 hypothetical protein; NAD-dependent epimerase/dehydratase 1563845 10212433 Rahaq_1432 Rahnella sp. Y9602 NAD-dependent epimerase/dehydratase YP_004212182.1 1562811 R 741091 CDS YP_004212183.1 322832156 10212434 complement(1564002..1565456) 1 NC_015061.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: spe:Spro_1661 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1565456 10212434 Rahaq_1433 Rahnella sp. Y9602 NAD-dependent epimerase/dehydratase YP_004212183.1 1564002 R 741091 CDS YP_004212184.1 322832157 10212435 complement(1565539..1566552) 1 NC_015061.1 KEGG: yen:YE1505 L-threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; threonine aldolase 1566552 10212435 Rahaq_1434 Rahnella sp. Y9602 threonine aldolase YP_004212184.1 1565539 R 741091 CDS YP_004212185.1 322832158 10212436 complement(1566630..1568351) 1 NC_015061.1 PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; KEGG: spe:Spro_1664 pyruvate dehydrogenase; thiamine pyrophosphate TPP-binding domain-containing protein 1568351 10212436 Rahaq_1435 Rahnella sp. Y9602 thiamine pyrophosphate TPP-binding domain-containing protein YP_004212185.1 1566630 R 741091 CDS YP_004212186.1 322832159 10212437 complement(1568647..1569660) 1 NC_015061.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: dda:Dd703_2272 HCP oxidoreductase, NADH-dependent; ferredoxin 1569660 10212437 Rahaq_1436 Rahnella sp. Y9602 ferredoxin YP_004212186.1 1568647 R 741091 CDS YP_004212187.1 322832160 10212438 complement(1569667..1571319) 1 NC_015061.1 KEGG: ddd:Dda3937_02367 hybrid cluster protein [4Fe-2S-2O] protein in anaerobic terminal reductases; TIGRFAM: hybrid cluster protein; PFAM: Prismane; hybrid cluster protein 1571319 10212438 Rahaq_1437 Rahnella sp. Y9602 hybrid cluster protein YP_004212187.1 1569667 R 741091 CDS YP_004212188.1 322832161 10212439 complement(1571486..1572385) 1 NC_015061.1 PFAM: protein of unknown function DUF340 membrane; KEGG: yen:YE1511 hypothetical protein; hypothetical protein 1572385 10212439 Rahaq_1438 Rahnella sp. Y9602 hypothetical protein YP_004212188.1 1571486 R 741091 CDS YP_004212189.1 322832162 10212440 1572575..1574308 1 NC_015061.1 KEGG: spe:Spro_1668 hypothetical protein; hypothetical protein 1574308 10212440 Rahaq_1439 Rahnella sp. Y9602 hypothetical protein YP_004212189.1 1572575 D 741091 CDS YP_004212190.1 322832163 10212441 complement(1574305..1575294) 1 NC_015061.1 PFAM: protein of unknown function DUF535; KEGG: spe:Spro_1669 hypothetical protein; hypothetical protein 1575294 10212441 Rahaq_1440 Rahnella sp. Y9602 hypothetical protein YP_004212190.1 1574305 R 741091 CDS YP_004212191.1 322832164 10212442 complement(1575587..1575808) 1 NC_015061.1 TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein DNA-binding; KEGG: spe:Spro_1672 cold-shock DNA-binding domain-containing protein; SMART: Cold shock protein; cold-shock protein 1575808 10212442 Rahaq_1441 Rahnella sp. Y9602 cold-shock protein YP_004212191.1 1575587 R 741091 CDS YP_004212192.1 322832165 10212443 1576202..1576522 1 NC_015061.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: spe:Spro_1673 ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS 1576522 10212443 Rahaq_1442 Rahnella sp. Y9602 ATP-dependent Clp protease adaptor protein ClpS YP_004212192.1 1576202 D 741091 CDS YP_004212193.1 322832166 10212444 1576550..1578832 1 NC_015061.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: ATPase AAA-2 domain protein; AAA ATPase; Clp domain protein; Clp ATPase-like; KEGG: spe:Spro_1674 ATP-dependent Clp protease ATP-binding subunit; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding protein ClpA 1578832 10212444 Rahaq_1443 Rahnella sp. Y9602 ATP-dependent Clp protease ATP-binding protein ClpA YP_004212193.1 1576550 D 741091 CDS YP_004212194.1 322832167 10212445 complement(1579054..1579272) 1 NC_015061.1 KEGG: pam:PANA_1335 InfA; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein; translation initiation factor IF-1 1579272 10212445 Rahaq_1444 Rahnella sp. Y9602 translation initiation factor IF-1 YP_004212194.1 1579054 R 741091 CDS YP_004212195.1 322832168 10212446 complement(1579366..1580100) 1 NC_015061.1 TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; KEGG: spe:Spro_1676 leucyl/phenylalanyl-tRNA--protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase; leucyl/phenylalanyl-tRNA/protein transferase 1580100 10212446 Rahaq_1445 Rahnella sp. Y9602 leucyl/phenylalanyl-tRNA/protein transferase YP_004212195.1 1579366 R 741091 CDS YP_004212196.1 322832169 10212447 complement(1580152..1581876) 1 NC_015061.1 TIGRFAM: ABC transporter CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; KEGG: spe:Spro_1677 cysteine/glutathione ABC transporter membrane/ATP-binding component; SMART: AAA ATPase; cysteine ABC transporter permease/ATP-binding protein 1581876 10212447 Rahaq_1446 Rahnella sp. Y9602 cysteine ABC transporter permease/ATP-binding protein YP_004212196.1 1580152 R 741091 CDS YP_004212197.1 322832170 10212448 complement(1581876..1583642) 1 NC_015061.1 SMART: AAA ATPase; manually curated; KEGG: spe:Spro_1678 cysteine/glutathione ABC transporter membrane/ATP-binding component; TIGRFAM: ABC transporter CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; cysteine ABC transporter permease/ATP-binding protein 1583642 10212448 Rahaq_1447 Rahnella sp. Y9602 cysteine ABC transporter permease/ATP-binding protein YP_004212197.1 1581876 R 741091 CDS YP_004212198.1 322832171 10212449 complement(1583791..1584759) 1 NC_015061.1 KEGG: ent:Ent638_1412 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase 1584759 10212449 Rahaq_1448 Rahnella sp. Y9602 thioredoxin reductase YP_004212198.1 1583791 R 741091 CDS YP_004212199.1 322832172 10212451 1585492..1585986 1 NC_015061.1 KEGG: dze:Dd1591_2361 leucine-responsive transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 1585986 10212451 Rahaq_1450 Rahnella sp. Y9602 AsnC family transcriptional regulator YP_004212199.1 1585492 D 741091 CDS YP_004212200.1 322832173 10212452 1586107..1589553 1 NC_015061.1 PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: spe:Spro_1683 cell division protein FtsK/SpoIIIE; cell division protein FtsK 1589553 10212452 Rahaq_1451 Rahnella sp. Y9602 cell division protein FtsK YP_004212200.1 1586107 D 741091 CDS YP_004212201.1 322832174 10212453 1589748..1590359 1 NC_015061.1 KEGG: yen:YE1526 outer-membrane lipoprotein carrier protein; TIGRFAM: outer membrane lipoprotein carrier protein LolA; PFAM: outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA 1590359 10212453 Rahaq_1452 Rahnella sp. Y9602 outer membrane lipoprotein carrier protein LolA YP_004212201.1 1589748 D 741091 CDS YP_004212202.1 322832175 10212454 1590367..1591710 1 NC_015061.1 KEGG: spe:Spro_1685 recombination factor protein RarA; PFAM: AAA ATPase; SMART: AAA ATPase; ATPase AAA 1591710 10212454 Rahaq_1453 Rahnella sp. Y9602 ATPase AAA YP_004212202.1 1590367 D 741091 CDS YP_004212203.1 322832176 10212455 1591817..1593109 1 NC_015061.1 KEGG: yen:YE1528 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; seryl-tRNA synthetase 1593109 10212455 Rahaq_1454 Rahnella sp. Y9602 seryl-tRNA synthetase YP_004212203.1 1591817 D 741091 CDS YP_004212204.1 322832177 10212456 1593309..1595765 1 NC_015061.1 KEGG: spe:Spro_1687 anaerobic dimethyl sulfoxide reductase subunit A; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; anaerobic dimethyl sulfoxide reductase subunit A 1595765 10212456 Rahaq_1455 Rahnella sp. Y9602 anaerobic dimethyl sulfoxide reductase subunit A YP_004212204.1 1593309 D 741091 CDS YP_004212205.1 322832178 10212457 1595842..1598289 1 NC_015061.1 KEGG: ecp:ECP_0908 anaerobic dimethyl sulfoxide reductase chain A precursor; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; Twin-arginine translocation pathway, signal sequence, subgroup; molydopterin dinucleotide-binding region; anaerobic dimethyl sulfoxide reductase subunit A 1598289 10212457 Rahaq_1456 Rahnella sp. Y9602 anaerobic dimethyl sulfoxide reductase subunit A YP_004212205.1 1595842 D 741091 CDS YP_004212206.1 322832179 10212458 1598301..1598918 1 NC_015061.1 TIGRFAM: dimethylsulfoxide reductase, chain B; KEGG: ctu:Ctu_22110 anaerobic dimethyl sulfoxide reductase chain B; dimethylsulfoxide reductase subunit B 1598918 10212458 Rahaq_1457 Rahnella sp. Y9602 dimethylsulfoxide reductase subunit B YP_004212206.1 1598301 D 741091 CDS YP_004212207.1 322832180 10212459 1598920..1599777 1 NC_015061.1 PFAM: DMSO reductase anchor subunit (DmsC); KEGG: yps:YPTB0807 anaerobic dimethyl sulfoxide reductase, subunit C; DMSO reductase anchor subunit DmsC 1599777 10212459 Rahaq_1458 Rahnella sp. Y9602 DMSO reductase anchor subunit DmsC YP_004212207.1 1598920 D 741091 CDS YP_004212208.1 322832181 10212460 1599847..1600455 1 NC_015061.1 KEGG: dda:Dd703_2252 cytoplasmic chaperone TorD family protein; cytoplasmic chaperone TorD family protein 1600455 10212460 Rahaq_1459 Rahnella sp. Y9602 cytoplasmic chaperone TorD family protein YP_004212208.1 1599847 D 741091 CDS YP_004212209.1 322832182 10212461 1600455..1601027 1 NC_015061.1 KEGG: etr:ETAE_2190 hypothetical protein; hypothetical protein 1601027 10212461 Rahaq_1460 Rahnella sp. Y9602 hypothetical protein YP_004212209.1 1600455 D 741091 CDS YP_004212210.1 322832183 10212462 1601161..1602306 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE1530 MFS family transporter protein; major facilitator superfamily protein 1602306 10212462 Rahaq_1461 Rahnella sp. Y9602 major facilitator superfamily protein YP_004212210.1 1601161 D 741091 CDS YP_004212211.1 322832184 10212463 complement(1602412..1603209) 1 NC_015061.1 TIGRFAM: pyruvate formate-lyase activating enzyme; KEGG: sea:SeAg_B0975 pyruvate formate lyase-activating enzyme 1; PFAM: Radical SAM domain protein; pyruvate formate-lyase activating enzyme 1603209 10212463 Rahaq_1462 Rahnella sp. Y9602 pyruvate formate-lyase activating enzyme YP_004212211.1 1602412 R 741091 CDS YP_004212212.1 322832185 10212464 complement(1603250..1604236) 1 NC_015061.1 PFAM: integrase family protein; KEGG: eca:ECA2637 phage integrase; integrase family protein 1604236 10212464 Rahaq_1463 Rahnella sp. Y9602 integrase family protein YP_004212212.1 1603250 R 741091 CDS YP_004212213.1 322832186 10212465 complement(1604339..1604638) 1 NC_015061.1 KEGG: pmr:PMI2006 phage repressor protein C; phage repressor protein C 1604638 10212465 Rahaq_1464 Rahnella sp. Y9602 phage repressor protein C YP_004212213.1 1604339 R 741091 CDS YP_004212214.1 322832187 10212466 1604745..1605119 1 NC_015061.1 PFAM: Regulatory phage protein Cox; KEGG: eca:ECA2635 phage regulatory protein; Regulatory phage protein Cox 1605119 10212466 Rahaq_1465 Rahnella sp. Y9602 Regulatory phage protein Cox YP_004212214.1 1604745 D 741091 CDS YP_004212215.1 322832188 10212467 1605298..1605798 1 NC_015061.1 KEGG: ecz:ECS88_2224 replication gene B protein (GpB); replication protein B protein (GpB) 1605798 10212467 Rahaq_1466 Rahnella sp. Y9602 replication protein B protein (GpB) YP_004212215.1 1605298 D 741091 CDS YP_004212216.1 322832189 10212468 1605858..1606100 1 NC_015061.1 KEGG: pct:PC1_3160 hypothetical protein; hypothetical protein 1606100 10212468 Rahaq_1467 Rahnella sp. Y9602 hypothetical protein YP_004212216.1 1605858 D 741091 CDS YP_004212217.1 322832190 10212469 1606100..1606318 1 NC_015061.1 TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; KEGG: pct:PC1_3162 transcriptional regulator, TraR/DksA family; phage/conjugal plasmid C-4 type zinc finger protein, TraR family 1606318 10212469 Rahaq_1468 Rahnella sp. Y9602 phage/conjugal plasmid C-4 type zinc finger protein, TraR family YP_004212217.1 1606100 D 741091 CDS YP_004212218.1 322832191 10212470 1606321..1606599 1 NC_015061.1 KEGG: ypy:YPK_0890 relication initiation protein; relication initiation protein 1606599 10212470 Rahaq_1469 Rahnella sp. Y9602 relication initiation protein YP_004212218.1 1606321 D 741091 CDS YP_004212219.1 322832192 10212471 1606607..1608889 1 NC_015061.1 PFAM: replication gene A; KEGG: pct:PC1_3164 replication protein A; replication protein A 1608889 10212471 Rahaq_1470 Rahnella sp. Y9602 replication protein A YP_004212219.1 1606607 D 741091 CDS YP_004212220.1 322832193 10212472 1609202..1610293 1 NC_015061.1 KEGG: oan:Oant_1158 hypothetical protein; hypothetical protein 1610293 10212472 Rahaq_1471 Rahnella sp. Y9602 hypothetical protein YP_004212220.1 1609202 D 741091 CDS YP_004212221.1 322832194 10212473 1610290..1611528 1 NC_015061.1 KEGG: bch:Bcen2424_0193 hypothetical protein; hypothetical protein 1611528 10212473 Rahaq_1472 Rahnella sp. Y9602 hypothetical protein YP_004212221.1 1610290 D 741091 CDS YP_004212222.1 322832195 10212474 1611525..1612163 1 NC_015061.1 KEGG: sek:SSPA2407 hypothetical protein; hypothetical protein 1612163 10212474 Rahaq_1473 Rahnella sp. Y9602 hypothetical protein YP_004212222.1 1611525 D 741091 CDS YP_004212223.1 322832196 10212475 complement(1612307..1612468) 1 NC_015061.1 hypothetical protein 1612468 10212475 Rahaq_1474 Rahnella sp. Y9602 hypothetical protein YP_004212223.1 1612307 R 741091 CDS YP_004212224.1 322832197 10212476 1613298..1615835 1 NC_015061.1 PFAM: AAA-4 family protein; KEGG: spl:Spea_1171 transcriptional regulator; ATPase AAA 1615835 10212476 Rahaq_1475 Rahnella sp. Y9602 ATPase AAA YP_004212224.1 1613298 D 741091 CDS YP_004212225.1 322832198 10212477 complement(1615911..1616942) 1 NC_015061.1 KEGG: yps:YPTB1764 capsid portal protein; TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein; phage portal protein, PBSX family 1616942 10212477 Rahaq_1476 Rahnella sp. Y9602 phage portal protein, PBSX family YP_004212225.1 1615911 R 741091 CDS YP_004212226.1 322832199 10212478 complement(1616945..1618711) 1 NC_015061.1 KEGG: ctu:Ctu_32400 terminase, ATPase subunit; terminase, ATPase subunit 1618711 10212478 Rahaq_1477 Rahnella sp. Y9602 terminase, ATPase subunit YP_004212226.1 1616945 R 741091 CDS YP_004212227.1 322832200 10212479 1618856..1619707 1 NC_015061.1 PFAM: capsid scaffolding; KEGG: yps:YPTB1858 V protein phage 186; capsid scaffolding 1619707 10212479 Rahaq_1478 Rahnella sp. Y9602 capsid scaffolding YP_004212227.1 1618856 D 741091 CDS YP_004212228.1 322832201 10212480 1619756..1620820 1 NC_015061.1 KEGG: ent:Ent638_3499 P2 family phage major capsid protein; TIGRFAM: phage major capsid protein, P2 family; PFAM: major capsid protein P2; phage major capsid protein, P2 family 1620820 10212480 Rahaq_1479 Rahnella sp. Y9602 phage major capsid protein, P2 family YP_004212228.1 1619756 D 741091 CDS YP_004212229.1 322832202 10212481 1620832..1621488 1 NC_015061.1 PFAM: small terminase subunit; KEGG: pct:PC1_3174 small terminase subunit; small terminase subunit 1621488 10212481 Rahaq_1480 Rahnella sp. Y9602 small terminase subunit YP_004212229.1 1620832 D 741091 CDS YP_004212230.1 322832203 10212482 1621584..1622054 1 NC_015061.1 PFAM: head completion protein; KEGG: yps:YPTB1758 phage head completion protein GpL; head completion protein 1622054 10212482 Rahaq_1481 Rahnella sp. Y9602 head completion protein YP_004212230.1 1621584 D 741091 CDS YP_004212231.1 322832204 10212483 1622054..1622257 1 NC_015061.1 PFAM: tail X family protein; KEGG: yps:YPTB1757 phage-related tail protein; tail X family protein 1622257 10212483 Rahaq_1482 Rahnella sp. Y9602 tail X family protein YP_004212231.1 1622054 D 741091 CDS YP_004212232.1 322832205 10212484 1622263..1622472 1 NC_015061.1 KEGG: spe:Spro_0872 prophage Hp1 family holin; prophage Hp1 family holin 1622472 10212484 Rahaq_1483 Rahnella sp. Y9602 prophage Hp1 family holin YP_004212232.1 1622263 D 741091 CDS YP_004212233.1 322832206 10212485 1622453..1622962 1 NC_015061.1 PFAM: glycoside hydrolase family 24; KEGG: yps:YPTB1755 phage lysozyme; glycoside hydrolase 1622962 10212485 Rahaq_1484 Rahnella sp. Y9602 glycoside hydrolase YP_004212233.1 1622453 D 741091 CDS YP_004212234.1 322832207 10212486 1622962..1623405 1 NC_015061.1 TIGRFAM: phage lysis regulatory protein, LysB family; KEGG: yps:YPTB1754 Orf27; P2 LysB homolog; control of lysis [Ente; phage lysis regulatory protein, LysB family 1623405 10212486 Rahaq_1485 Rahnella sp. Y9602 phage lysis regulatory protein, LysB family YP_004212234.1 1622962 D 741091 CDS YP_004212235.1 322832208 10212487 1623483..1623950 1 NC_015061.1 KEGG: ecv:APECO1_4476 tail protein; tail protein 1623950 10212487 Rahaq_1486 Rahnella sp. Y9602 tail protein YP_004212235.1 1623483 D 741091 CDS YP_004212236.1 322832209 10212488 1623943..1624389 1 NC_015061.1 TIGRFAM: phage virion morphogenesis protein; KEGG: ctu:Ctu_32300 tail completion protein S; phage virion morphogenesis protein 1624389 10212488 Rahaq_1487 Rahnella sp. Y9602 phage virion morphogenesis protein YP_004212236.1 1623943 D 741091 CDS YP_004212237.1 322832210 10212489 1624470..1625342 1 NC_015061.1 KEGG: kpn:KPN_01312 hypothetical protein; hypothetical protein 1625342 10212489 Rahaq_1488 Rahnella sp. Y9602 hypothetical protein YP_004212237.1 1624470 D 741091 CDS YP_004212238.1 322832211 10212490 1625459..1626100 1 NC_015061.1 TIGRFAM: phage baseplate assembly protein V; KEGG: spe:Spro_0869 phage baseplate assembly protein V; phage baseplate assembly protein V 1626100 10212490 Rahaq_1489 Rahnella sp. Y9602 phage baseplate assembly protein V YP_004212238.1 1625459 D 741091 CDS YP_004212239.1 322832212 10212491 1626097..1626447 1 NC_015061.1 PFAM: GPW/gp25 family protein; KEGG: yps:YPTB1750 hypothetical protein; GPW/gp25 family protein 1626447 10212491 Rahaq_1490 Rahnella sp. Y9602 GPW/gp25 family protein YP_004212239.1 1626097 D 741091 CDS YP_004212240.1 322832213 10212492 1626451..1627359 1 NC_015061.1 PFAM: Baseplate J family protein; KEGG: spe:Spro_0867 baseplate J family protein; baseplate J family protein 1627359 10212492 Rahaq_1491 Rahnella sp. Y9602 baseplate J family protein YP_004212240.1 1626451 D 741091 CDS YP_004212241.1 322832214 10212493 1627352..1627879 1 NC_015061.1 TIGRFAM: phage tail protein I; KEGG: ecz:ECS88_2197 tail protein I (GPI); phage tail protein I 1627879 10212493 Rahaq_1492 Rahnella sp. Y9602 phage tail protein I YP_004212241.1 1627352 D 741091 CDS YP_004212242.1 322832215 10212494 1627889..1630405 1 NC_015061.1 PFAM: tail fiber repeat 2 protein; KEGG: ecz:ECS88_2196 phage tail fiber protein H (GpH); tail fiber repeat 2 protein 1630405 10212494 Rahaq_1493 Rahnella sp. Y9602 tail fiber repeat 2 protein YP_004212242.1 1627889 D 741091 CDS YP_004212243.1 322832216 10212495 1630415..1630870 1 NC_015061.1 PFAM: tail assembly chaperone gp38; KEGG: plu:plu3023 hypothetical protein; tail assembly chaperone gp38 1630870 10212495 Rahaq_1494 Rahnella sp. Y9602 tail assembly chaperone gp38 YP_004212243.1 1630415 D 741091 CDS YP_004212244.1 322832217 10212496 1631033..1632202 1 NC_015061.1 KEGG: spe:Spro_0863 tail sheath protein; tail sheath protein 1632202 10212496 Rahaq_1495 Rahnella sp. Y9602 tail sheath protein YP_004212244.1 1631033 D 741091 CDS YP_004212245.1 322832218 10212497 1632216..1632725 1 NC_015061.1 KEGG: spe:Spro_0862 phage major tail tube protein; TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; phage major tail tube protein 1632725 10212497 Rahaq_1496 Rahnella sp. Y9602 phage major tail tube protein YP_004212245.1 1632216 D 741091 CDS YP_004212246.1 322832219 10212498 1632784..1633065 1 NC_015061.1 PFAM: tail E family protein; KEGG: spe:Spro_0861 tail E family protein; tail E family protein 1633065 10212498 Rahaq_1497 Rahnella sp. Y9602 tail E family protein YP_004212246.1 1632784 D 741091 CDS YP_004212247.1 322832220 10212499 1633098..1633217 1 NC_015061.1 KEGG: dze:Dd1591_1812 P2 GpE family protein; manually curated; PFAM: P2 GpE family protein; P2 GpE family protein 1633217 10212499 Rahaq_1498 Rahnella sp. Y9602 P2 GpE family protein YP_004212247.1 1633098 D 741091 CDS YP_004212248.1 322832221 10212500 1633210..1635801 1 NC_015061.1 KEGG: yps:YPTB1741 bacteriophage P2 tail protein gpT; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region; phage tail tape measure protein, TP901 family 1635801 10212500 Rahaq_1499 Rahnella sp. Y9602 phage tail tape measure protein, TP901 family YP_004212248.1 1633210 D 741091 CDS YP_004212249.1 322832222 10212501 1635812..1636297 1 NC_015061.1 PFAM: P2 GpU family protein; KEGG: yps:YPTB1740 phage tail protein; P2 GpU family protein 1636297 10212501 Rahaq_1500 Rahnella sp. Y9602 P2 GpU family protein YP_004212249.1 1635812 D 741091 CDS YP_004212250.1 322832223 10212502 1636294..1637457 1 NC_015061.1 KEGG: yps:YPTB1739 D protein bacteriophage 186 and P2; D protein bacteriophage 186 and P2 1637457 10212502 Rahaq_1501 Rahnella sp. Y9602 D protein bacteriophage 186 and P2 YP_004212250.1 1636294 D 741091 CDS YP_004212251.1 322832224 10212503 complement(1637487..1637735) 1 NC_015061.1 KEGG: etr:ETAE_1308 hypothetical protein; hypothetical protein 1637735 10212503 Rahaq_1502 Rahnella sp. Y9602 hypothetical protein YP_004212251.1 1637487 R 741091 CDS YP_004212252.1 322832225 10212504 1637886..1638119 1 NC_015061.1 PFAM: transcriptional activator Ogr/delta; KEGG: ecg:E2348C_2893 predicted DNA-binding transcriptional regulator; transcriptional activator Ogr/delta 1638119 10212504 Rahaq_1503 Rahnella sp. Y9602 transcriptional activator Ogr/delta YP_004212252.1 1637886 D 741091 CDS YP_004212253.1 322832226 10212505 complement(1638635..1640917) 1 NC_015061.1 TIGRFAM: formate acetyltransferase; KEGG: spe:Spro_1702 formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; formate acetyltransferase 1640917 10212505 Rahaq_1504 Rahnella sp. Y9602 formate acetyltransferase YP_004212253.1 1638635 R 741091 CDS YP_004212254.1 322832227 10212506 complement(1640993..1641850) 1 NC_015061.1 KEGG: spe:Spro_1703 formate transporter; TIGRFAM: formate/nitrite transporter; PFAM: formate/nitrite transporter; formate/nitrite transporter 1641850 10212506 Rahaq_1505 Rahnella sp. Y9602 formate/nitrite transporter YP_004212254.1 1640993 R 741091 CDS YP_004212255.1 322832228 10212507 complement(1642349..1644175) 1 NC_015061.1 PFAM: protein of unknown function DUF181; KEGG: spe:Spro_1704 hypothetical protein; hypothetical protein 1644175 10212507 Rahaq_1506 Rahnella sp. Y9602 hypothetical protein YP_004212255.1 1642349 R 741091 CDS YP_004212256.1 322832229 10212508 1644438..1645523 1 NC_015061.1 TIGRFAM: phosphoserine aminotransferase; KEGG: ypg:YpAngola_A1952 phosphoserine aminotransferase; PFAM: aminotransferase class V; phosphoserine aminotransferase 1645523 10212508 Rahaq_1507 Rahnella sp. Y9602 phosphoserine aminotransferase YP_004212256.1 1644438 D 741091 CDS YP_004212257.1 322832230 10212509 1645628..1646911 1 NC_015061.1 KEGG: cko:CKO_02164 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); 3-phosphoshikimate 1-carboxyvinyltransferase 1646911 10212509 Rahaq_1508 Rahnella sp. Y9602 3-phosphoshikimate 1-carboxyvinyltransferase YP_004212257.1 1645628 D 741091 CDS YP_004212258.1 322832231 10212510 1647108..1647806 1 NC_015061.1 TIGRFAM: cytidylate kinase; KEGG: spe:Spro_1708 cytidylate kinase; PFAM: cytidylate kinase region; cytidylate kinase 1647806 10212510 Rahaq_1509 Rahnella sp. Y9602 cytidylate kinase YP_004212258.1 1647108 D 741091 CDS YP_004212259.1 322832232 10212511 1647927..1649636 1 NC_015061.1 KEGG: dze:Dd1591_2339 30S ribosomal protein S1; TIGRFAM: ribosomal protein S1; PFAM: RNA binding S1 domain protein; 30S ribosomal protein S1 1649636 10212511 Rahaq_1510 Rahnella sp. Y9602 30S ribosomal protein S1 YP_004212259.1 1647927 D 741091 CDS YP_004212260.1 322832233 10212512 1649697..1649981 1 NC_015061.1 TIGRFAM: integration host factor, subunit beta; PFAM: histone family protein DNA-binding protein; KEGG: spe:Spro_1710 integration host factor subunit beta; SMART: histone family protein DNA-binding protein; integration host factor subunit beta 1649981 10212512 Rahaq_1511 Rahnella sp. Y9602 integration host factor subunit beta YP_004212260.1 1649697 D 741091 CDS YP_004212261.1 322832234 10212513 1650253..1652499 1 NC_015061.1 KEGG: spe:Spro_1711 hypothetical protein; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2 1652499 10212513 Rahaq_1512 Rahnella sp. Y9602 DNA internalization-related competence protein ComEC/Rec2 YP_004212261.1 1650253 D 741091 CDS YP_004212262.1 322832235 10212514 1652538..1654286 1 NC_015061.1 TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter transmembrane region; ABC transporter related; KEGG: ecz:ECS88_0942 lipid transporter ATP-binding/permease protein; SMART: AAA ATPase; lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA 1654286 10212514 Rahaq_1513 Rahnella sp. Y9602 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA YP_004212262.1 1652538 D 741091 CDS YP_004212263.1 322832236 10212515 1654283..1655272 1 NC_015061.1 TIGRFAM: tetraacyldisaccharide 4'-kinase; KEGG: spe:Spro_1713 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; tetraacyldisaccharide 4'-kinase 1655272 10212515 Rahaq_1514 Rahnella sp. Y9602 tetraacyldisaccharide 4'-kinase YP_004212263.1 1654283 D 741091 CDS YP_004212264.1 322832237 10212516 1655622..1655831 1 NC_015061.1 KEGG: yen:YE1546 cold shock protein CspE2; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock protein 1655831 10212516 Rahaq_1515 Rahnella sp. Y9602 cold-shock protein YP_004212264.1 1655622 D 741091 CDS YP_004212265.1 322832238 10212517 1656093..1656305 1 NC_015061.1 KEGG: yen:YE1547 cold shock-like protein cspE3; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock protein 1656305 10212517 Rahaq_1516 Rahnella sp. Y9602 cold-shock protein YP_004212265.1 1656093 D 741091 CDS YP_004212266.1 322832239 10212518 1656401..1657624 1 NC_015061.1 PFAM: protein of unknown function DUF1006; KEGG: spe:Spro_1717 hypothetical protein; hypothetical protein 1657624 10212518 Rahaq_1517 Rahnella sp. Y9602 hypothetical protein YP_004212266.1 1656401 D 741091 CDS YP_004212267.1 322832240 10212519 1658006..1658188 1 NC_015061.1 PFAM: protein of unknown function DUF343; KEGG: yen:YE1549 hypothetical protein; hypothetical protein 1658188 10212519 Rahaq_1518 Rahnella sp. Y9602 hypothetical protein YP_004212267.1 1658006 D 741091 CDS YP_004212268.1 322832241 10212520 1658185..1658943 1 NC_015061.1 TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: ebi:EbC_15100 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; 3-deoxy-D-manno-octulosonate cytidylyltransferase 1658943 10212520 Rahaq_1519 Rahnella sp. Y9602 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_004212268.1 1658185 D 741091 CDS YP_004212269.1 322832242 10212521 1659139..1660032 1 NC_015061.1 PFAM: aminoglycoside phosphotransferase; KEGG: spe:Spro_1720 hypothetical protein; aminoglycoside phosphotransferase 1660032 10212521 Rahaq_1520 Rahnella sp. Y9602 aminoglycoside phosphotransferase YP_004212269.1 1659139 D 741091 CDS YP_004212270.1 322832243 10212522 complement(1660034..1660813) 1 NC_015061.1 PFAM: protein of unknown function DUF218; KEGG: cro:ROD_09881 hypothetical protein; hypothetical protein 1660813 10212522 Rahaq_1521 Rahnella sp. Y9602 hypothetical protein YP_004212270.1 1660034 R 741091 CDS YP_004212271.1 322832244 10212523 1660969..1661754 1 NC_015061.1 PFAM: methyltransferase type 11; KEGG: dze:Dd1591_2302 metallothionein SmtA; type 11 methyltransferase 1661754 10212523 Rahaq_1522 Rahnella sp. Y9602 type 11 methyltransferase YP_004212271.1 1660969 D 741091 CDS YP_004212272.1 322832245 10212524 1661751..1663073 1 NC_015061.1 PFAM: chromosome segregation and condensation protein MukF; KEGG: spe:Spro_1723 condesin subunit F; chromosome segregation and condensation protein MukF 1663073 10212524 Rahaq_1523 Rahnella sp. Y9602 chromosome segregation and condensation protein MukF YP_004212272.1 1661751 D 741091 CDS YP_004212273.1 322832246 10212525 1663054..1663785 1 NC_015061.1 PFAM: chromosome segregation and condensation protein MukE; KEGG: spe:Spro_1724 condesin subunit E; chromosome segregation and condensation protein MukE 1663785 10212525 Rahaq_1524 Rahnella sp. Y9602 chromosome segregation and condensation protein MukE YP_004212273.1 1663054 D 741091 CDS YP_004212274.1 322832247 10212526 1663782..1668230 1 NC_015061.1 PFAM: chromosome segregation and condensation protein MukB domain protein; KEGG: spe:Spro_1725 cell division protein MukB; chromosome segregation and condensation protein MukB domain protein 1668230 10212526 Rahaq_1525 Rahnella sp. Y9602 chromosome segregation and condensation protein MukB domain protein YP_004212274.1 1663782 D 741091 CDS YP_004212275.1 322832248 10212527 1668592..1670442 1 NC_015061.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; KEGG: spe:Spro_1726 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 1670442 10212527 Rahaq_1526 Rahnella sp. Y9602 ErfK/YbiS/YcfS/YnhG family protein YP_004212275.1 1668592 D 741091 CDS YP_004212276.1 322832249 10212528 1670622..1671173 1 NC_015061.1 PFAM: protein of unknown function DUF882; KEGG: spe:Spro_1727 hypothetical protein; hypothetical protein 1671173 10212528 Rahaq_1527 Rahnella sp. Y9602 hypothetical protein YP_004212276.1 1670622 D 741091 CDS YP_004212277.1 322832250 10212529 1671225..1671872 1 NC_015061.1 KEGG: cro:ROD_09961 hypothetical protein; hypothetical protein 1671872 10212529 Rahaq_1528 Rahnella sp. Y9602 hypothetical protein YP_004212277.1 1671225 D 741091 CDS YP_004212278.1 322832251 10212530 complement(1671958..1673148) 1 NC_015061.1 KEGG: spe:Spro_1729 aromatic amino acid aminotransferase; PFAM: aminotransferase class I and II; aspartate transaminase 1673148 10212530 Rahaq_1529 Rahnella sp. Y9602 aspartate transaminase YP_004212278.1 1671958 R 741091 CDS YP_004212279.1 322832252 10212531 complement(1673390..1674502) 1 NC_015061.1 PFAM: porin Gram-negative type; KEGG: spe:Spro_1730 porin; porin 1674502 10212531 Rahaq_1530 Rahnella sp. Y9602 porin YP_004212279.1 1673390 R 741091 CDS YP_004212280.1 322832253 10212532 complement(1674802..1676202) 1 NC_015061.1 TIGRFAM: asparaginyl-tRNA synthetase; KEGG: pct:PC1_1785 asparaginyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; asparaginyl-tRNA synthetase 1676202 10212532 Rahaq_1531 Rahnella sp. Y9602 asparaginyl-tRNA synthetase YP_004212280.1 1674802 R 741091 CDS YP_004212281.1 322832254 10212533 complement(1676462..1677667) 1 NC_015061.1 KEGG: spe:Spro_1732 nicotinate phosphoribosyltransferase; TIGRFAM: nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; nicotinate phosphoribosyltransferase 1677667 10212533 Rahaq_1532 Rahnella sp. Y9602 nicotinate phosphoribosyltransferase YP_004212281.1 1676462 R 741091 CDS YP_004212282.1 322832255 10212534 1678362..1680977 1 NC_015061.1 KEGG: spe:Spro_1734 aminopeptidase N; TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; aminopeptidase 1680977 10212534 Rahaq_1533 Rahnella sp. Y9602 aminopeptidase YP_004212282.1 1678362 D 741091 CDS YP_004212283.1 322832256 10212535 complement(1681053..1681835) 1 NC_015061.1 KEGG: spe:Spro_1735 aliphatic sulfonates transport ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1681835 10212535 Rahaq_1534 Rahnella sp. Y9602 ABC transporter YP_004212283.1 1681053 R 741091 CDS YP_004212284.1 322832257 10212536 complement(1681832..1682623) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_1736 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1682623 10212536 Rahaq_1535 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004212284.1 1681832 R 741091 CDS YP_004212285.1 322832258 10212537 complement(1682635..1683789) 1 NC_015061.1 TIGRFAM: alkanesulfonate monooxygenase, FMNH(2)-dependent; KEGG: ypz:YPZ3_3115 alkanesulfonate monooxygenase; PFAM: luciferase; alkanesulfonate monooxygenase 1683789 10212537 Rahaq_1536 Rahnella sp. Y9602 alkanesulfonate monooxygenase YP_004212285.1 1682635 R 741091 CDS YP_004212286.1 322832259 10212538 complement(1683849..1684823) 1 NC_015061.1 KEGG: spe:Spro_1738 alkanesulfonate transporter substrate-binding subunit; TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; aliphatic sulfonates ABC transporter substrate-binding protein 1684823 10212538 Rahaq_1537 Rahnella sp. Y9602 aliphatic sulfonates ABC transporter substrate-binding protein YP_004212286.1 1683849 R 741091 CDS YP_004212287.1 322832260 10212539 complement(1684842..1685423) 1 NC_015061.1 TIGRFAM: FMN reductase; KEGG: ypb:YPTS_3796 NAD(P)H-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; FMN reductase 1685423 10212539 Rahaq_1538 Rahnella sp. Y9602 FMN reductase YP_004212287.1 1684842 R 741091 CDS YP_004212288.1 322832261 10212540 1685739..1686749 1 NC_015061.1 TIGRFAM: dihydroorotate dehydrogenase; KEGG: ypb:YPTS_1543 dihydroorotate dehydrogenase 2; PFAM: dihydroorotate oxidase; dihydroorotate dehydrogenase 1686749 10212540 Rahaq_1539 Rahnella sp. Y9602 dihydroorotate dehydrogenase YP_004212288.1 1685739 D 741091 CDS YP_004212289.1 322832262 10212541 1686934..1687482 1 NC_015061.1 PFAM: protein of unknown function DUF1379; KEGG: spe:Spro_1741 hypothetical protein; hypothetical protein 1687482 10212541 Rahaq_1540 Rahnella sp. Y9602 hypothetical protein YP_004212289.1 1686934 D 741091 CDS YP_004212290.1 322832263 10212542 complement(1687513..1688616) 1 NC_015061.1 PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; ferredoxin; KEGG: spe:Spro_1742 MOSC domain-containing protein; MOSC domain-containing protein 1688616 10212542 Rahaq_1541 Rahnella sp. Y9602 MOSC domain-containing protein YP_004212290.1 1687513 R 741091 CDS YP_004212291.1 322832264 10212543 1688727..1690847 1 NC_015061.1 KEGG: yen:YE1571 23S rRNA m(2)G2445 methyltransferase; PFAM: RNA methylase; THUMP domain-containing protein; rRNA (guanine-N(2)-)-methyltransferase 1690847 10212543 Rahaq_1542 Rahnella sp. Y9602 rRNA (guanine-N(2)-)-methyltransferase YP_004212291.1 1688727 D 741091 CDS YP_004212292.1 322832265 10212544 1690853..1692757 1 NC_015061.1 KEGG: spe:Spro_1744 ABC transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1692757 10212544 Rahaq_1543 Rahnella sp. Y9602 ABC transporter YP_004212292.1 1690853 D 741091 CDS YP_004212293.1 322832266 10212545 1692839..1694110 1 NC_015061.1 KEGG: ypy:YPK_2639 PqiA family integral membrane protein; TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A; PqiA family integral membrane protein 1694110 10212545 Rahaq_1544 Rahnella sp. Y9602 PqiA family integral membrane protein YP_004212293.1 1692839 D 741091 CDS YP_004212294.1 322832267 10212546 1694097..1695749 1 NC_015061.1 PFAM: Mammalian cell entry related domain protein; KEGG: spe:Spro_1746 paraquat-inducible protein B; mammalian cell entry domain-containing protein 1695749 10212546 Rahaq_1545 Rahnella sp. Y9602 mammalian cell entry domain-containing protein YP_004212294.1 1694097 D 741091 CDS YP_004212295.1 322832268 10212547 1695749..1696315 1 NC_015061.1 PFAM: protein of unknown function DUF330; KEGG: yen:YE1575 lipoprotein protein; hypothetical protein 1696315 10212547 Rahaq_1546 Rahnella sp. Y9602 hypothetical protein YP_004212295.1 1695749 D 741091 CDS YP_004212296.1 322832269 10212548 1696591..1696758 1 NC_015061.1 KEGG: ypb:YPTS_1551 ribosome modulation factor; manually curated; PFAM: ribosome modulation factor; ribosome modulation factor 1696758 10212548 Rahaq_1547 Rahnella sp. Y9602 ribosome modulation factor YP_004212296.1 1696591 D 741091 CDS YP_004212297.1 322832270 10212549 complement(1696909..1697427) 1 NC_015061.1 TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA; KEGG: spe:Spro_1751 3-hydroxydecanoyl-(acyl carrier protein) dehydratase; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 1697427 10212549 Rahaq_1548 Rahnella sp. Y9602 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA YP_004212297.1 1696909 R 741091 CDS YP_004212298.1 322832271 10212550 complement(1697496..1699262) 1 NC_015061.1 KEGG: spe:Spro_1752 Lon protease; Lon protease 1699262 10212550 Rahaq_1549 Rahnella sp. Y9602 Lon protease YP_004212298.1 1697496 R 741091 CDS YP_004212299.1 322832272 10212551 1699473..1699934 1 NC_015061.1 PFAM: protein of unknown function DUF1047; KEGG: spe:Spro_1753 hypothetical protein; hypothetical protein 1699934 10212551 Rahaq_1550 Rahnella sp. Y9602 hypothetical protein YP_004212299.1 1699473 D 741091 CDS YP_004212300.1 322832273 10212552 complement(1700044..1701120) 1 NC_015061.1 PFAM: OmpA/MotB domain protein; KEGG: eay:EAM_1377 outer membrane protein A; OmpA/MotB domain-containing protein 1701120 10212552 Rahaq_1551 Rahnella sp. Y9602 OmpA/MotB domain-containing protein YP_004212300.1 1700044 R 741091 CDS YP_004212301.1 322832274 10212553 complement(1701478..1701984) 1 NC_015061.1 PFAM: cell division inhibitor SulA; KEGG: spe:Spro_1755 SOS cell division inhibitor; cell division inhibitor SulA 1701984 10212553 Rahaq_1552 Rahnella sp. Y9602 cell division inhibitor SulA YP_004212301.1 1701478 R 741091 CDS YP_004212302.1 322832275 10212554 1702201..1702833 1 NC_015061.1 PFAM: TfoX domain-containing protein; KEGG: ddd:Dda3937_02826 CRP-S promoter co-activator; competence-specific genes regulator 1702833 10212554 Rahaq_1553 Rahnella sp. Y9602 competence-specific genes regulator YP_004212302.1 1702201 D 741091 CDS YP_004212303.1 322832276 10212555 complement(1702855..1704996) 1 NC_015061.1 TIGRFAM: hypothetical protein; integral membrane protein, YccS/YhfK family; KEGG: yen:YE1584 hypothetical protein; hypothetical protein 1704996 10212555 Rahaq_1554 Rahnella sp. Y9602 hypothetical protein YP_004212303.1 1702855 R 741091 CDS YP_004212304.1 322832277 10212556 complement(1705039..1705500) 1 NC_015061.1 PFAM: protein of unknown function DUF307; KEGG: eca:ECA1755 hypothetical protein; hypothetical protein 1705500 10212556 Rahaq_1555 Rahnella sp. Y9602 hypothetical protein YP_004212304.1 1705039 R 741091 CDS YP_004212305.1 322832278 10212557 1705677..1707731 1 NC_015061.1 PFAM: UvrD/REP helicase; KEGG: spe:Spro_1759 DNA helicase IV; UvrD/REP helicase 1707731 10212557 Rahaq_1556 Rahnella sp. Y9602 UvrD/REP helicase YP_004212305.1 1705677 D 741091 CDS YP_004212306.1 322832279 10212558 complement(1707798..1708259) 1 NC_015061.1 TIGRFAM: methylglyoxal synthase; KEGG: dze:Dd1591_1215 methylglyoxal synthase; PFAM: MGS domain protein; methylglyoxal synthase 1708259 10212558 Rahaq_1557 Rahnella sp. Y9602 methylglyoxal synthase YP_004212306.1 1707798 R 741091 CDS YP_004212307.1 322832280 10212559 complement(1708379..1709038) 1 NC_015061.1 PFAM: Protein of unknown function DUF2057; KEGG: spe:Spro_1761 hypothetical protein; hypothetical protein 1709038 10212559 Rahaq_1558 Rahnella sp. Y9602 hypothetical protein YP_004212307.1 1708379 R 741091 CDS YP_004212308.1 322832281 10212560 1709227..1709640 1 NC_015061.1 PFAM: CoA-binding domain protein; KEGG: yen:YE1589 hypothetical protein; CoA-binding protein 1709640 10212560 Rahaq_1559 Rahnella sp. Y9602 CoA-binding protein YP_004212308.1 1709227 D 741091 CDS YP_004212309.1 322832282 10212561 complement(1709723..1710040) 1 NC_015061.1 KEGG: bci:BCI_0412 heat shock protein HspQ; TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; hemimethylated DNA binding protein 1710040 10212561 Rahaq_1560 Rahnella sp. Y9602 hemimethylated DNA binding protein YP_004212309.1 1709723 R 741091 CDS YP_004212310.1 322832283 10212562 complement(1710168..1711403) 1 NC_015061.1 SMART: PUA domain containing protein; KEGG: spe:Spro_1764 PUA domain-containing protein; PUA domain containing protein 1711403 10212562 Rahaq_1561 Rahnella sp. Y9602 PUA domain containing protein YP_004212310.1 1710168 R 741091 CDS YP_004212311.1 322832284 10212563 1711460..1711738 1 NC_015061.1 PFAM: acylphosphatase; KEGG: spe:Spro_1765 acylphosphatase; acylphosphatase 1711738 10212563 Rahaq_1562 Rahnella sp. Y9602 acylphosphatase YP_004212311.1 1711460 D 741091 CDS YP_004212312.1 322832285 10212564 complement(1711745..1712074) 1 NC_015061.1 KEGG: dze:Dd1591_1220 sulfur relay protein, TusE/DsrC/DsvC family; TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC family protein; TusE/DsrC/DsvC family sulfur relay protein 1712074 10212564 Rahaq_1563 Rahnella sp. Y9602 TusE/DsrC/DsvC family sulfur relay protein YP_004212312.1 1711745 R 741091 CDS YP_004212313.1 322832286 10212565 complement(1712182..1712856) 1 NC_015061.1 PFAM: protein of unknown function UPF0005; KEGG: pct:PC1_2537 hypothetical protein; hypothetical protein 1712856 10212565 Rahaq_1564 Rahnella sp. Y9602 hypothetical protein YP_004212313.1 1712182 R 741091 CDS YP_004212314.1 322832287 10212568 complement(1713688..1714605) 1 NC_015061.1 KEGG: rlg:Rleg_1052 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 1714605 10212568 Rahaq_1565 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004212314.1 1713688 R 741091 CDS YP_004212315.1 322832288 10212569 1714743..1715633 1 NC_015061.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: gvi:glr1439 hypothetical protein; NAD-dependent epimerase/dehydratase 1715633 10212569 Rahaq_1566 Rahnella sp. Y9602 NAD-dependent epimerase/dehydratase YP_004212315.1 1714743 D 741091 CDS YP_004212316.1 322832289 10212570 1715832..1716920 1 NC_015061.1 PFAM: extracellular solute-binding protein family 1; KEGG: spe:Spro_3949 extracellular solute-binding protein; extracellular solute-binding protein 1716920 10212570 Rahaq_1567 Rahnella sp. Y9602 extracellular solute-binding protein YP_004212316.1 1715832 D 741091 CDS YP_004212317.1 322832290 10212571 1717008..1718777 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3948 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1718777 10212571 Rahaq_1568 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004212317.1 1717008 D 741091 CDS YP_004212318.1 322832291 10212572 1718770..1719840 1 NC_015061.1 KEGG: spe:Spro_3947 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1719840 10212572 Rahaq_1569 Rahnella sp. Y9602 ABC transporter YP_004212318.1 1718770 D 741091 CDS YP_004212319.1 322832292 10212573 1719938..1721563 1 NC_015061.1 KEGG: esa:ESA_01817 hypothetical protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; ligand binding Tar domain protein; SMART: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 1721563 10212573 Rahaq_1570 Rahnella sp. Y9602 methyl-accepting chemotaxis sensory transducer YP_004212319.1 1719938 D 741091 CDS YP_004212320.1 322832293 10212574 complement(1721571..1722170) 1 NC_015061.1 KEGG: esa:ESA_01329 hypothetical protein; hypothetical protein 1722170 10212574 Rahaq_1571 Rahnella sp. Y9602 hypothetical protein YP_004212320.1 1721571 R 741091 CDS YP_004212321.1 322832294 10212575 1722412..1722744 1 NC_015061.1 PFAM: SmpA/OmlA domain-containing protein; KEGG: spe:Spro_3258 DNA-binding transcriptional activator OsmE; SmpA/OmlA domain-containing protein 1722744 10212575 Rahaq_1572 Rahnella sp. Y9602 SmpA/OmlA domain-containing protein YP_004212321.1 1722412 D 741091 CDS YP_004212322.1 322832295 10212576 complement(1722786..1724513) 1 NC_015061.1 PFAM: sodium/hydrogen exchanger; TrkA-C domain protein; transporter-associated region; KEGG: ypb:YPTS_2590 potassium/proton antiporter; sodium/hydrogen exchanger 1724513 10212576 Rahaq_1573 Rahnella sp. Y9602 sodium/hydrogen exchanger YP_004212322.1 1722786 R 741091 CDS YP_004212323.1 322832296 10212577 1724681..1724902 1 NC_015061.1 KEGG: hna:Hneap_1660 hypothetical protein; hypothetical protein 1724902 10212577 Rahaq_1574 Rahnella sp. Y9602 hypothetical protein YP_004212323.1 1724681 D 741091 CDS YP_004212324.1 322832297 10212578 complement(1724953..1726266) 1 NC_015061.1 PFAM: FAD dependent oxidoreductase; KEGG: spe:Spro_2064 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1726266 10212578 Rahaq_1575 Rahnella sp. Y9602 FAD dependent oxidoreductase YP_004212324.1 1724953 R 741091 CDS YP_004212325.1 322832298 10212579 complement(1726317..1726874) 1 NC_015061.1 KEGG: kva:Kvar_3360 transcriptional regulator, XRE family; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; cupin 1726874 10212579 Rahaq_1576 Rahnella sp. Y9602 cupin YP_004212325.1 1726317 R 741091 CDS YP_004212326.1 322832299 10212580 complement(1726879..1727682) 1 NC_015061.1 KEGG: kpu:KP1_2005 gamma-glutamyl-gamma-aminobutyrate hydrolase; PFAM: peptidase C26; gamma-glutamyl-gamma-aminobutyrate hydrolase 1727682 10212580 Rahaq_1577 Rahnella sp. Y9602 gamma-glutamyl-gamma-aminobutyrate hydrolase YP_004212326.1 1726879 R 741091 CDS YP_004212327.1 322832300 10212581 1728038..1729480 1 NC_015061.1 PFAM: glutamine synthetase catalytic region; KEGG: spe:Spro_3216 glutamine synthetase catalytic region; glutamine synthetase 1729480 10212581 Rahaq_1578 Rahnella sp. Y9602 glutamine synthetase YP_004212327.1 1728038 D 741091 CDS YP_004212328.1 322832301 10212582 1729740..1729952 1 NC_015061.1 hypothetical protein 1729952 10212582 Rahaq_1579 Rahnella sp. Y9602 hypothetical protein YP_004212328.1 1729740 D 741091 CDS YP_004212329.1 322832302 10212583 1729942..1731318 1 NC_015061.1 PFAM: amino acid permease-associated region; KEGG: yen:YE2759 amino acid permease; amino acid permease 1731318 10212583 Rahaq_1580 Rahnella sp. Y9602 amino acid permease YP_004212329.1 1729942 D 741091 CDS YP_004212330.1 322832303 10212584 complement(1732002..1733429) 1 NC_015061.1 PFAM: Exonuclease domain protein; Exonuclease RNase T and DNA polymerase III; KEGG: spe:Spro_3214 exonuclease I; SMART: Exonuclease; Exodeoxyribonuclease I 1733429 10212584 Rahaq_1581 Rahnella sp. Y9602 Exodeoxyribonuclease I YP_004212330.1 1732002 R 741091 CDS YP_004212331.1 322832304 10212585 1733667..1734764 1 NC_015061.1 KEGG: spe:Spro_3209 hypothetical protein; hypothetical protein 1734764 10212585 Rahaq_1582 Rahnella sp. Y9602 hypothetical protein YP_004212331.1 1733667 D 741091 CDS YP_004212332.1 322832305 10212586 1734932..1735264 1 NC_015061.1 PFAM: protein of unknown function DUF496; KEGG: ypb:YPTS_1683 hypothetical protein; hypothetical protein 1735264 10212586 Rahaq_1583 Rahnella sp. Y9602 hypothetical protein YP_004212332.1 1734932 D 741091 CDS YP_004212333.1 322832306 10212587 complement(1735328..1736287) 1 NC_015061.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: spe:Spro_1336 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 1736287 10212587 Rahaq_1584 Rahnella sp. Y9602 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_004212333.1 1735328 R 741091 CDS YP_004212334.1 322832307 10212588 complement(1736488..1737591) 1 NC_015061.1 KEGG: ypb:YPTS_3224 ABC transporter related; PFAM: ABC transporter related; TOBE domain-containing protein; SMART: AAA ATPase; ABC transporter 1737591 10212588 Rahaq_1585 Rahnella sp. Y9602 ABC transporter YP_004212334.1 1736488 R 741091 CDS YP_004212335.1 322832308 10212589 1737868..1739094 1 NC_015061.1 PFAM: extracellular solute-binding protein family 1; KEGG: ypb:YPTS_3223 extracellular solute-binding protein; extracellular solute-binding protein 1739094 10212589 Rahaq_1586 Rahnella sp. Y9602 extracellular solute-binding protein YP_004212335.1 1737868 D 741091 CDS YP_004212336.1 322832309 10212590 1739175..1740482 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypb:YPTS_3222 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1740482 10212590 Rahaq_1587 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004212336.1 1739175 D 741091 CDS YP_004212337.1 322832310 10212591 1740496..1741347 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypb:YPTS_3221 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1741347 10212591 Rahaq_1588 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004212337.1 1740496 D 741091 CDS YP_004212338.1 322832311 10212592 1741352..1742563 1 NC_015061.1 KEGG: ypb:YPTS_3220 glycosyl hydrolase 53 protein; PFAM: glycosyl hydrolase 53 domain protein; arabinogalactan endo-1,4-beta-galactosidase 1742563 10212592 Rahaq_1589 Rahnella sp. Y9602 arabinogalactan endo-1,4-beta-galactosidase YP_004212338.1 1741352 D 741091 CDS YP_004212339.1 322832312 10212593 1742629..1744698 1 NC_015061.1 KEGG: pct:PC1_2962 beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein; beta-galactosidase 1744698 10212593 Rahaq_1590 Rahnella sp. Y9602 beta-galactosidase YP_004212339.1 1742629 D 741091 CDS YP_004212340.1 322832313 10212594 1744779..1745096 1 NC_015061.1 PFAM: Phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: ypb:YPTS_3218 phosphotransferase system PTS EIIB protein; phosphotransferase system EIIB/cysteine, phosphorylation site 1745096 10212594 Rahaq_1591 Rahnella sp. Y9602 phosphotransferase system EIIB/cysteine, phosphorylation site YP_004212340.1 1744779 D 741091 CDS YP_004212341.1 322832314 10212595 complement(1745416..1746672) 1 NC_015061.1 PFAM: porin LamB type; KEGG: enc:ECL_02641 maltoporin 1; porin 1746672 10212595 Rahaq_1592 Rahnella sp. Y9602 porin YP_004212341.1 1745416 R 741091 CDS YP_004212342.1 322832315 10212596 1746950..1748020 1 NC_015061.1 KEGG: ddc:Dd586_2927 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator 1748020 10212596 Rahaq_1593 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004212342.1 1746950 D 741091 CDS YP_004212343.1 322832316 10212597 1748107..1748583 1 NC_015061.1 PFAM: protein of unknown function DUF805; KEGG: kpe:KPK_4724 hypothetical protein; hypothetical protein 1748583 10212597 Rahaq_1594 Rahnella sp. Y9602 hypothetical protein YP_004212343.1 1748107 D 741091 CDS YP_004212344.1 322832317 10212598 complement(1748611..1749159) 1 NC_015061.1 PFAM: protein of unknown function DUF1234; KEGG: pct:PC1_2842 hypothetical protein; hypothetical protein 1749159 10212598 Rahaq_1595 Rahnella sp. Y9602 hypothetical protein YP_004212344.1 1748611 R 741091 CDS YP_004212345.1 322832318 10212599 complement(1749156..1749995) 1 NC_015061.1 TIGRFAM: triphosphoribosyl-dephospho-CoA synthase CitG; KEGG: ctu:Ctu_35610 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-As ynthase; PFAM: triphosphoribosyl-dephospho-CoA protein; triphosphoribosyl-dephospho-CoA synthase CitG 1749995 10212599 Rahaq_1596 Rahnella sp. Y9602 triphosphoribosyl-dephospho-CoA synthase CitG YP_004212345.1 1749156 R 741091 CDS YP_004212346.1 322832319 10212600 complement(1749973..1750512) 1 NC_015061.1 TIGRFAM: holo-ACP synthase CitX; KEGG: ent:Ent638_3371 holo-ACP synthase; PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; holo-ACP synthase CitX 1750512 10212600 Rahaq_1597 Rahnella sp. Y9602 holo-ACP synthase CitX YP_004212346.1 1749973 R 741091 CDS YP_004212347.1 322832320 10212601 complement(1750512..1752038) 1 NC_015061.1 TIGRFAM: citrate lyase, subunit alpha; KEGG: ent:Ent638_3372 citrate lyase, subunit alpha; PFAM: Citrate lyase subunit alpha; citrate lyase, subunit alpha 1752038 10212601 Rahaq_1598 Rahnella sp. Y9602 citrate lyase, subunit alpha YP_004212347.1 1750512 R 741091 CDS YP_004212348.1 322832321 10212602 complement(1752069..1752944) 1 NC_015061.1 TIGRFAM: citrate lyase, subunit beta; KEGG: ctu:Ctu_35640 citrate lyase subunit beta; PFAM: HpcH/HpaI aldolase; citrate lyase, subunit beta 1752944 10212602 Rahaq_1599 Rahnella sp. Y9602 citrate lyase, subunit beta YP_004212348.1 1752069 R 741091 CDS YP_004212349.1 322832322 10212603 complement(1752941..1753231) 1 NC_015061.1 TIGRFAM: citrate lyase acyl carrier protein; KEGG: ddc:Dd586_2563 citrate lyase acyl carrier protein; citrate lyase acyl carrier protein 1753231 10212603 Rahaq_1600 Rahnella sp. Y9602 citrate lyase acyl carrier protein YP_004212349.1 1752941 R 741091 CDS YP_004212350.1 322832323 10212604 complement(1753247..1754341) 1 NC_015061.1 SMART: Citrate lyase ligase domain protein; TIGRFAM: citrate lyase ligase; cytidyltransferase-related domain protein; KEGG: ddd:Dda3937_04561 citrate lyase synthetase; PFAM: Citrate lyase ligase domain protein; GCN5-related N-acetyltransferase; citrate lyase ligase 1754341 10212604 Rahaq_1601 Rahnella sp. Y9602 citrate lyase ligase YP_004212350.1 1753247 R 741091 CDS YP_004212351.1 322832324 10212605 complement(1754428..1755315) 1 NC_015061.1 KEGG: ctu:Ctu_35670 hypothetical protein; PFAM: fumarylacetoacetate (FAA) hydrolase; ureidoglycolate lyase 1755315 10212605 Rahaq_1602 Rahnella sp. Y9602 ureidoglycolate lyase YP_004212351.1 1754428 R 741091 CDS YP_004212352.1 322832325 10212606 complement(1755352..1756716) 1 NC_015061.1 PFAM: Citrate carrier protein; KEGG: cko:CKO_03359 hypothetical protein; citrate carrier protein 1756716 10212606 Rahaq_1603 Rahnella sp. Y9602 citrate carrier protein YP_004212352.1 1755352 R 741091 CDS YP_004212353.1 322832326 10212607 1757088..1758755 1 NC_015061.1 KEGG: enc:ECL_04301 two-component system, CitB family, cit operon sensor histidine kinase CitA; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; signal transduction histidine kinase regulating citrate/malate metabolism 1758755 10212607 Rahaq_1604 Rahnella sp. Y9602 signal transduction histidine kinase regulating citrate/malate metabolism YP_004212353.1 1757088 D 741091 CDS YP_004212354.1 322832327 10212608 1758742..1759431 1 NC_015061.1 KEGG: enc:ECL_04302 two-component system, CitB family, response regulator CitB; PFAM: response regulator receiver; SMART: response regulator receiver; fused response regulator receiver/hypothetical protein 1759431 10212608 Rahaq_1605 Rahnella sp. Y9602 fused response regulator receiver/hypothetical protein YP_004212354.1 1758742 D 741091 CDS YP_004212355.1 322832328 10212609 complement(1759442..1760872) 1 NC_015061.1 KEGG: ebi:EbC_28810 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 1760872 10212609 Rahaq_1606 Rahnella sp. Y9602 MATE efflux family protein YP_004212355.1 1759442 R 741091 CDS YP_004212356.1 322832329 10212610 complement(1761105..1762553) 1 NC_015061.1 TIGRFAM: AMP nucleosidase; KEGG: eca:ECA1547 AMP nucleosidase; PFAM: AMP nucleoside phosphorylase-like; purine or other phosphorylase family 1; AMP nucleosidase 1762553 10212610 Rahaq_1607 Rahnella sp. Y9602 AMP nucleosidase YP_004212356.1 1761105 R 741091 CDS YP_004212357.1 322832330 10212611 1762682..1763323 1 NC_015061.1 PFAM: Glutathione S-transferase domain; KEGG: ebi:EbC_12300 glutathione S-transferase family protein; glutathione S-transferase 1763323 10212611 Rahaq_1608 Rahnella sp. Y9602 glutathione S-transferase YP_004212357.1 1762682 D 741091 CDS YP_004212358.1 322832331 10212612 complement(1763390..1764709) 1 NC_015061.1 KEGG: ctu:Ctu_26880 shikimate transporter; TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: major facilitator superfamily MFS_1; metabolite/H+ symporter, major facilitator superfamily (MFS) 1764709 10212612 Rahaq_1609 Rahnella sp. Y9602 metabolite/H+ symporter, major facilitator superfamily (MFS) YP_004212358.1 1763390 R 741091 CDS YP_004212359.1 322832332 10212613 complement(1764914..1765612) 1 NC_015061.1 PFAM: pseudouridine synthase; KEGG: spe:Spro_3940 pseudouridine synthase; pseudouridine synthase 1765612 10212613 Rahaq_1610 Rahnella sp. Y9602 pseudouridine synthase YP_004212359.1 1764914 R 741091 CDS YP_004212360.1 322832333 10212614 complement(1765763..1766671) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbr:BB1990 LysR family regulatory protein; LysR family transcriptional regulator 1766671 10212614 Rahaq_1611 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004212360.1 1765763 R 741091 CDS YP_004212361.1 322832334 10212615 complement(1766805..1767578) 1 NC_015061.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pap:PSPA7_2236 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 1767578 10212615 Rahaq_1612 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004212361.1 1766805 R 741091 CDS YP_004212362.1 322832335 10212616 complement(1767770..1768786) 1 NC_015061.1 KEGG: kva:Kvar_0807 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator 1768786 10212616 Rahaq_1613 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004212362.1 1767770 R 741091 CDS YP_004212363.1 322832336 10212617 1769031..1770272 1 NC_015061.1 TIGRFAM: oligosaccharide/H+ symporter, major facilitator superfamily (MFS); KEGG: kpu:KP1_4537 galactoside permease; oligosaccharide/H+ symporter, major facilitator superfamily (MFS) 1770272 10212617 Rahaq_1614 Rahnella sp. Y9602 oligosaccharide/H+ symporter, major facilitator superfamily (MFS) YP_004212363.1 1769031 D 741091 CDS YP_004212364.1 322832337 10212618 1770291..1771724 1 NC_015061.1 TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32 domain protein; KEGG: kpu:KP1_4536 family 32 glycoside hydrolase; SMART: glycoside hydrolase family 32; sucrose-6-phosphate hydrolase 1771724 10212618 Rahaq_1615 Rahnella sp. Y9602 sucrose-6-phosphate hydrolase YP_004212364.1 1770291 D 741091 CDS YP_004212365.1 322832338 10212619 1771848..1773200 1 NC_015061.1 KEGG: kpu:KP1_4535 outer membrane protein; outer membrane protein 1773200 10212619 Rahaq_1616 Rahnella sp. Y9602 outer membrane protein YP_004212365.1 1771848 D 741091 CDS YP_004212366.1 322832339 10212620 complement(1773256..1773390) 1 NC_015061.1 hypothetical protein 1773390 10212620 Rahaq_1617 Rahnella sp. Y9602 hypothetical protein YP_004212366.1 1773256 R 741091 CDS YP_004212367.1 322832340 10212621 complement(1773492..1774277) 1 NC_015061.1 PFAM: MltA-interacting MipA family protein; KEGG: ebi:EbC_17550 conserved uncharacterized protein; MltA-interacting MipA family protein 1774277 10212621 Rahaq_1618 Rahnella sp. Y9602 MltA-interacting MipA family protein YP_004212367.1 1773492 R 741091 CDS YP_004212368.1 322832341 10212622 1774418..1774582 1 NC_015061.1 hypothetical protein 1774582 10212622 Rahaq_1619 Rahnella sp. Y9602 hypothetical protein YP_004212368.1 1774418 D 741091 CDS YP_004212369.1 322832342 10212623 1774609..1775751 1 NC_015061.1 KEGG: pam:PANA_3995 AcrA; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 1775751 10212623 Rahaq_1620 Rahnella sp. Y9602 RND family efflux transporter MFP subunit YP_004212369.1 1774609 D 741091 CDS YP_004212370.1 322832343 10212624 1775748..1778822 1 NC_015061.1 PFAM: acriflavin resistance protein; KEGG: enc:ECL_02244 RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; acriflavin resistance protein 1778822 10212624 Rahaq_1621 Rahnella sp. Y9602 acriflavin resistance protein YP_004212370.1 1775748 D 741091 CDS YP_004212371.1 322832344 10212625 1778934..1779722 1 NC_015061.1 PFAM: alpha/beta hydrolase fold; KEGG: spe:Spro_2663 dioxygenase; alpha/beta hydrolase 1779722 10212625 Rahaq_1622 Rahnella sp. Y9602 alpha/beta hydrolase YP_004212371.1 1778934 D 741091 CDS YP_004212372.1 322832345 10212626 complement(1779818..1781065) 1 NC_015061.1 KEGG: pfs:PFLU2294 levansucrase; PFAM: glycoside hydrolase family 68; levansucrase 1781065 10212626 Rahaq_1623 Rahnella sp. Y9602 levansucrase YP_004212372.1 1779818 R 741091 CDS YP_004212373.1 322832346 10212627 complement(1781374..1782636) 1 NC_015061.1 KEGG: bur:Bcep18194_B0413 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; Bcr/CflA subfamily drug resistance transporter 1782636 10212627 Rahaq_1624 Rahnella sp. Y9602 Bcr/CflA subfamily drug resistance transporter YP_004212373.1 1781374 R 741091 CDS YP_004212374.1 322832347 10212628 1782673..1783545 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bur:Bcep18194_B0412 LysR family transcriptional regulator; LysR family transcriptional regulator 1783545 10212628 Rahaq_1625 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004212374.1 1782673 D 741091 CDS YP_004212375.1 322832348 10212629 1783600..1784112 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: enc:ECL_02140 acetyltransferase, GNAT family; N-acetyltransferase GCN5 1784112 10212629 Rahaq_1626 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004212375.1 1783600 D 741091 CDS YP_004212376.1 322832349 10212630 complement(1784199..1785089) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2455 LysR family transcriptional regulator; LysR family transcriptional regulator 1785089 10212630 Rahaq_1627 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004212376.1 1784199 R 741091 CDS YP_004212377.1 322832350 10212631 1785319..1786515 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2456 major facilitator transporter; major facilitator superfamily protein 1786515 10212631 Rahaq_1628 Rahnella sp. Y9602 major facilitator superfamily protein YP_004212377.1 1785319 D 741091 CDS YP_004212378.1 322832351 10212632 1786526..1787554 1 NC_015061.1 KEGG: spe:Spro_2457 signal peptide protein; hypothetical protein 1787554 10212632 Rahaq_1629 Rahnella sp. Y9602 hypothetical protein YP_004212378.1 1786526 D 741091 CDS YP_004212379.1 322832352 10212633 1787603..1788031 1 NC_015061.1 KEGG: sli:Slin_2181 hypothetical protein; hypothetical protein 1788031 10212633 Rahaq_1630 Rahnella sp. Y9602 hypothetical protein YP_004212379.1 1787603 D 741091 CDS YP_004212380.1 322832353 10212634 complement(1788356..1789252) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: enc:ECL_02248 transcriptional regulator, LysR family; LysR family transcriptional regulator 1789252 10212634 Rahaq_1631 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004212380.1 1788356 R 741091 CDS YP_004212381.1 322832354 10212635 1789350..1790405 1 NC_015061.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: enc:ECL_02247 NAD-dependent epimerase/dehydratase family protein; NAD-dependent epimerase/dehydratase 1790405 10212635 Rahaq_1632 Rahnella sp. Y9602 NAD-dependent epimerase/dehydratase YP_004212381.1 1789350 D 741091 CDS YP_004212382.1 322832355 10212638 complement(1790915..1791397) 1 NC_015061.1 KEGG: rlg:Rleg_1861 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR 1791397 10212638 Rahaq_1635 Rahnella sp. Y9602 regulatory protein MarR YP_004212382.1 1790915 R 741091 CDS YP_004212383.1 322832356 10212639 1791468..1792403 1 NC_015061.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: rpc:RPC_4092 zinc-binding alcohol dehydrogenase; alcohol dehydrogenase 1792403 10212639 Rahaq_1636 Rahnella sp. Y9602 alcohol dehydrogenase YP_004212383.1 1791468 D 741091 CDS YP_004212384.1 322832357 10212640 complement(1792892..1793791) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ent:Ent638_1879 LysR family transcriptional regulator; LysR family transcriptional regulator 1793791 10212640 Rahaq_1637 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004212384.1 1792892 R 741091 CDS YP_004212385.1 322832358 10212641 1793932..1794507 1 NC_015061.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: eca:ECA1483 NAD(P)H oxidoreductase; NAD(P)H dehydrogenase (quinone) 1794507 10212641 Rahaq_1638 Rahnella sp. Y9602 NAD(P)H dehydrogenase (quinone) YP_004212385.1 1793932 D 741091 CDS YP_004212386.1 322832359 10212642 1794523..1794801 1 NC_015061.1 PFAM: YCII-related; KEGG: eca:ECA1484 hypothetical protein; hypothetical protein 1794801 10212642 Rahaq_1639 Rahnella sp. Y9602 hypothetical protein YP_004212386.1 1794523 D 741091 CDS YP_004212387.1 322832360 10212643 1794846..1795388 1 NC_015061.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: ent:Ent638_1875 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 1795388 10212643 Rahaq_1640 Rahnella sp. Y9602 antibiotic biosynthesis monooxygenase YP_004212387.1 1794846 D 741091 CDS YP_004212388.1 322832361 10212644 complement(1795593..1796216) 1 NC_015061.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: ebi:EbC_43640 pyridoxamine 5\'-phosphate oxidase family protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 1796216 10212644 Rahaq_1641 Rahnella sp. Y9602 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_004212388.1 1795593 R 741091 CDS YP_004212389.1 322832362 10212645 complement(1796278..1796391) 1 NC_015061.1 hypothetical protein 1796391 10212645 Rahaq_1642 Rahnella sp. Y9602 hypothetical protein YP_004212389.1 1796278 R 741091 CDS YP_004212390.1 322832363 10212646 complement(1796445..1796984) 1 NC_015061.1 KEGG: dda:Dd703_0041 lysine exporter protein (LysE/YggA); manually curated; PFAM: lysine exporter protein (LYSE/YGGA); lysine exporter protein LysE/YggA 1796984 10212646 Rahaq_1643 Rahnella sp. Y9602 lysine exporter protein LysE/YggA YP_004212390.1 1796445 R 741091 CDS YP_004212391.1 322832364 10212647 complement(1796989..1797285) 1 NC_015061.1 PFAM: Chorismate mutase, type II; KEGG: ebi:EbC_pEb17201570 chorismate mutase family protein; chorismate mutase 1797285 10212647 Rahaq_1644 Rahnella sp. Y9602 chorismate mutase YP_004212391.1 1796989 R 741091 CDS YP_004212392.1 322832365 10212648 1797623..1798240 1 NC_015061.1 manually curated; KEGG: eca:ECA1481 hypothetical protein; hypothetical protein 1798240 10212648 Rahaq_1645 Rahnella sp. Y9602 hypothetical protein YP_004212392.1 1797623 D 741091 CDS YP_004212393.1 322832366 10212649 1798378..1798860 1 NC_015061.1 KEGG: dze:Dd1591_2454 peroxiredoxin; PFAM: glutathione peroxidase; peroxiredoxin 1798860 10212649 Rahaq_1646 Rahnella sp. Y9602 peroxiredoxin YP_004212393.1 1798378 D 741091 CDS YP_004212394.1 322832367 10212650 complement(1798857..1799552) 1 NC_015061.1 KEGG: eca:ECA1468 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1799552 10212650 Rahaq_1647 Rahnella sp. Y9602 ABC transporter YP_004212394.1 1798857 R 741091 CDS YP_004212395.1 322832368 10212651 complement(1799563..1801251) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pwa:Pecwa_2990 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1801251 10212651 Rahaq_1648 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004212395.1 1799563 R 741091 CDS YP_004212396.1 322832369 10212652 complement(1801235..1802272) 1 NC_015061.1 PFAM: extracellular solute-binding protein family 1; KEGG: pwa:Pecwa_2989 extracellular solute-binding protein family 1; extracellular solute-binding protein 1802272 10212652 Rahaq_1649 Rahnella sp. Y9602 extracellular solute-binding protein YP_004212396.1 1801235 R 741091 CDS YP_004212397.1 322832370 10212653 complement(1802486..1803400) 1 NC_015061.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pwa:Pecwa_1289 diguanylate cyclase; SMART: GGDEF domain containing protein; diguanylate cyclase 1803400 10212653 Rahaq_1650 Rahnella sp. Y9602 diguanylate cyclase YP_004212397.1 1802486 R 741091 CDS YP_004212398.1 322832371 10212654 complement(1803739..1804335) 1 NC_015061.1 KEGG: set:SEN1367 conserved hypothetical DNA-binding protein; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 1804335 10212654 Rahaq_1651 Rahnella sp. Y9602 helix-turn-helix domain-containing protein YP_004212398.1 1803739 R 741091 CDS YP_004212399.1 322832372 10212655 1804379..1805083 1 NC_015061.1 PFAM: B3/4 domain protein; KEGG: spq:SPAB_01596 hypothetical protein; B3/4 domain-containing protein 1805083 10212655 Rahaq_1652 Rahnella sp. Y9602 B3/4 domain-containing protein YP_004212399.1 1804379 D 741091 CDS YP_004212400.1 322832373 10212657 complement(1805360..1806133) 1 NC_015061.1 KEGG: ebi:EbC_28640 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 1806133 10212657 Rahaq_1654 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004212400.1 1805360 R 741091 CDS YP_004212401.1 322832374 10212658 complement(1806150..1806935) 1 NC_015061.1 KEGG: ebi:EbC_28630 oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter 1806935 10212658 Rahaq_1655 Rahnella sp. Y9602 ABC transporter YP_004212401.1 1806150 R 741091 CDS YP_004212402.1 322832375 10212659 complement(1806932..1808728) 1 NC_015061.1 KEGG: ebi:EbC_28620 oligopeptide/dipeptide ABC transporter permease and ATP-binding protein; PFAM: ABC transporter related; binding-protein-dependent transport systems inner membrane component; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter 1808728 10212659 Rahaq_1656 Rahnella sp. Y9602 ABC transporter YP_004212402.1 1806932 R 741091 CDS YP_004212403.1 322832376 10212660 complement(1808725..1809672) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_28610 oligopeptide/dipeptide ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 1809672 10212660 Rahaq_1657 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004212403.1 1808725 R 741091 CDS YP_004212404.1 322832377 10212661 complement(1809687..1811261) 1 NC_015061.1 PFAM: extracellular solute-binding protein family 5; KEGG: ebi:EbC_28600 oligopeptide/dipeptide ABC transporter solute-binding protein; family 5 extracellular solute-binding protein 1811261 10212661 Rahaq_1658 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004212404.1 1809687 R 741091 CDS YP_004212405.1 322832378 10212662 1811405..1812055 1 NC_015061.1 PFAM: protein of unknown function DUF1028; KEGG: ebi:EbC_28590 conserved uncharacterized protein; hypothetical protein 1812055 10212662 Rahaq_1659 Rahnella sp. Y9602 hypothetical protein YP_004212405.1 1811405 D 741091 CDS YP_004212406.1 322832379 10212664 complement(1812166..1812282) 1 NC_015061.1 hypothetical protein 1812282 10212664 Rahaq_1661 Rahnella sp. Y9602 hypothetical protein YP_004212406.1 1812166 R 741091 CDS YP_004212407.1 322832380 10212666 complement(1812579..1813787) 1 NC_015061.1 PFAM: aminotransferase class I and II; KEGG: kpe:KPK_3294 aspartate transaminase; class I and II aminotransferase 1813787 10212666 Rahaq_1662 Rahnella sp. Y9602 class I and II aminotransferase YP_004212407.1 1812579 R 741091 CDS YP_004212408.1 322832381 10212667 1813991..1815193 1 NC_015061.1 KEGG: atu:Atu5476 CTP synthase; PFAM: glutamine amidotransferase class-I; CTP synthase 1815193 10212667 Rahaq_1663 Rahnella sp. Y9602 CTP synthase YP_004212408.1 1813991 D 741091 CDS YP_004212409.1 322832382 10212668 complement(1815253..1816173) 1 NC_015061.1 PFAM: dihydrodipicolinate synthetase; KEGG: kva:Kvar_3160 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 1816173 10212668 Rahaq_1664 Rahnella sp. Y9602 dihydrodipicolinate synthetase YP_004212409.1 1815253 R 741091 CDS YP_004212410.1 322832383 10212669 complement(1816208..1817392) 1 NC_015061.1 PFAM: creatinase; peptidase M24; KEGG: kva:Kvar_3159 creatinase; creatinase 1817392 10212669 Rahaq_1665 Rahnella sp. Y9602 creatinase YP_004212410.1 1816208 R 741091 CDS YP_004212411.1 322832384 10212670 complement(1817389..1818486) 1 NC_015061.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: kva:Kvar_3158 mandelate racemase/muconate lactonizing protein; mandelate racemase/muconate lactonizing protein 1818486 10212670 Rahaq_1666 Rahnella sp. Y9602 mandelate racemase/muconate lactonizing protein YP_004212411.1 1817389 R 741091 CDS YP_004212412.1 322832385 10212671 complement(1818497..1819660) 1 NC_015061.1 KEGG: kpe:KPK_3289 peptidase, ArgE/DapE family; TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase 1819660 10212671 Rahaq_1667 Rahnella sp. Y9602 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase YP_004212412.1 1818497 R 741091 CDS YP_004212413.1 322832386 10212672 complement(1819745..1820488) 1 NC_015061.1 KEGG: ara:Arad_7100 general L-amino acid ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1820488 10212672 Rahaq_1668 Rahnella sp. Y9602 ABC transporter YP_004212413.1 1819745 R 741091 CDS YP_004212414.1 322832387 10212673 complement(1820499..1821212) 1 NC_015061.1 KEGG: kva:Kvar_3155 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 1821212 10212673 Rahaq_1669 Rahnella sp. Y9602 polar amino acid ABC transporter inner membrane subunit YP_004212414.1 1820499 R 741091 CDS YP_004212415.1 322832388 10212674 complement(1821259..1822077) 1 NC_015061.1 KEGG: kpe:KPK_3286 amino acid ABC transporter periplasmic amino acid-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 1822077 10212674 Rahaq_1670 Rahnella sp. Y9602 family 3 extracellular solute-binding protein YP_004212415.1 1821259 R 741091 CDS YP_004212416.1 322832389 10212675 1822270..1823169 1 NC_015061.1 KEGG: kva:Kvar_3153 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 1823169 10212675 Rahaq_1671 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004212416.1 1822270 D 741091 CDS YP_004212417.1 322832390 10212676 1823209..1823994 1 NC_015061.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: kpe:KPK_3284 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 1823994 10212676 Rahaq_1672 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004212417.1 1823209 D 741091 CDS YP_004212418.1 322832391 10212677 1824344..1825270 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3129 nitrogen assimilation transcriptional regulator; LysR family transcriptional regulator 1825270 10212677 Rahaq_1673 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004212418.1 1824344 D 741091 CDS YP_004212419.1 322832392 10212678 complement(1825354..1825689) 1 NC_015061.1 KEGG: esa:ESA_03321 hypothetical protein; hypothetical protein 1825689 10212678 Rahaq_1674 Rahnella sp. Y9602 hypothetical protein YP_004212419.1 1825354 R 741091 CDS YP_004212420.1 322832393 10212679 complement(1825936..1826241) 1 NC_015061.1 PFAM: protein of unknown function DUF466; KEGG: ypb:YPTS_2225 hypothetical protein; hypothetical protein 1826241 10212679 Rahaq_1675 Rahnella sp. Y9602 hypothetical protein YP_004212420.1 1825936 R 741091 CDS YP_004212421.1 322832394 10212680 complement(1826234..1828300) 1 NC_015061.1 PFAM: carbon starvation protein CstA; KEGG: spe:Spro_2639 carbon starvation protein CstA; carbon starvation protein CstA 1828300 10212680 Rahaq_1676 Rahnella sp. Y9602 carbon starvation protein CstA YP_004212421.1 1826234 R 741091 CDS YP_004212422.1 322832395 10212681 complement(1828587..1829096) 1 NC_015061.1 PFAM: protein of unknown function Spy-related; KEGG: spe:Spro_4741 periplasmic protein; hypothetical protein 1829096 10212681 Rahaq_1677 Rahnella sp. Y9602 hypothetical protein YP_004212422.1 1828587 R 741091 CDS YP_004212423.1 322832396 10212682 1829464..1830897 1 NC_015061.1 KEGG: ypi:YpsIP31758_2122 GntR family transcriptional regulator; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 1830897 10212682 Rahaq_1678 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004212423.1 1829464 D 741091 CDS YP_004212424.1 322832397 10212683 complement(1830907..1831515) 1 NC_015061.1 PFAM: sugar isomerase (SIS); KEGG: spe:Spro_4698 sugar isomerase (SIS); sugar isomerase (SIS) 1831515 10212683 Rahaq_1679 Rahnella sp. Y9602 sugar isomerase (SIS) YP_004212424.1 1830907 R 741091 CDS YP_004212425.1 322832398 10212684 complement(1831512..1833152) 1 NC_015061.1 KEGG: spe:Spro_4697 FGGY-family pentulose kinase; TIGRFAM: FGGY-family pentulose kinase; PFAM: Carbohydrate kinase, FGGY-like; FGGY-family pentulose kinase 1833152 10212684 Rahaq_1680 Rahnella sp. Y9602 FGGY-family pentulose kinase YP_004212425.1 1831512 R 741091 CDS YP_004212426.1 322832399 10212685 complement(1833182..1834135) 1 NC_015061.1 PFAM: inner-membrane translocator; KEGG: spe:Spro_4696 monosaccharide-transporting ATPase; inner-membrane translocator 1834135 10212685 Rahaq_1681 Rahnella sp. Y9602 inner-membrane translocator YP_004212426.1 1833182 R 741091 CDS YP_004212427.1 322832400 10212686 complement(1834137..1835126) 1 NC_015061.1 PFAM: inner-membrane translocator; KEGG: spe:Spro_4695 monosaccharide-transporting ATPase; inner-membrane translocator 1835126 10212686 Rahaq_1682 Rahnella sp. Y9602 inner-membrane translocator YP_004212427.1 1834137 R 741091 CDS YP_004212428.1 322832401 10212687 complement(1835119..1836657) 1 NC_015061.1 KEGG: spe:Spro_4694 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1836657 10212687 Rahaq_1683 Rahnella sp. Y9602 ABC transporter YP_004212428.1 1835119 R 741091 CDS YP_004212429.1 322832402 10212688 complement(1836927..1837913) 1 NC_015061.1 KEGG: ebi:EbC_31200 ribose ABC transporter periplasmic binding protein; ribose ABC transporter periplasmic binding protein 1837913 10212688 Rahaq_1684 Rahnella sp. Y9602 ribose ABC transporter periplasmic binding protein YP_004212429.1 1836927 R 741091 CDS YP_004212430.1 322832403 10212689 1838730..1839950 1 NC_015061.1 TIGRFAM: succinylornithine transaminase family; acetylornithine and succinylornithine aminotransferase; KEGG: spe:Spro_2844 bifunctional succinylornithine transaminase/acetylornithine transaminase; PFAM: aminotransferase class-III; succinylornithine transaminase family 1839950 10212689 Rahaq_1685 Rahnella sp. Y9602 succinylornithine transaminase family YP_004212430.1 1838730 D 741091 CDS YP_004212431.1 322832404 10212690 1839979..1841052 1 NC_015061.1 TIGRFAM: arginine N-succinyltransferase; arginine/ornithine succinyltransferase subunit; KEGG: spe:Spro_2843 arginine succinyltransferase; PFAM: arginine N-succinyltransferase subunit beta; arginine N-succinyltransferase 1841052 10212690 Rahaq_1686 Rahnella sp. Y9602 arginine N-succinyltransferase YP_004212431.1 1839979 D 741091 CDS YP_004212432.1 322832405 10212691 1841049..1842527 1 NC_015061.1 KEGG: spe:Spro_2842 succinylglutamic semialdehyde dehydrogenase; TIGRFAM: succinylglutamic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; succinylglutamic semialdehyde dehydrogenase 1842527 10212691 Rahaq_1687 Rahnella sp. Y9602 succinylglutamic semialdehyde dehydrogenase YP_004212432.1 1841049 D 741091 CDS YP_004212433.1 322832406 10212692 1842538..1843881 1 NC_015061.1 TIGRFAM: succinylarginine dihydrolase; KEGG: spe:Spro_2841 succinylarginine dihydrolase; PFAM: Succinylarginine dihydrolase; succinylarginine dihydrolase 1843881 10212692 Rahaq_1688 Rahnella sp. Y9602 succinylarginine dihydrolase YP_004212433.1 1842538 D 741091 CDS YP_004212434.1 322832407 10212693 1843902..1844882 1 NC_015061.1 TIGRFAM: succinylglutamate desuccinylase; KEGG: ypb:YPTS_2015 succinylglutamate desuccinylase; PFAM: Succinylglutamate desuccinylase/aspartoacylase; succinylglutamate desuccinylase 1844882 10212693 Rahaq_1689 Rahnella sp. Y9602 succinylglutamate desuccinylase YP_004212434.1 1843902 D 741091 CDS YP_004212435.1 322832408 10212696 1845899..1847380 1 NC_015061.1 KEGG: spe:Spro_1932 amino acid/peptide transporter; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; amino acid/peptide transporter 1847380 10212696 Rahaq_1690 Rahnella sp. Y9602 amino acid/peptide transporter YP_004212435.1 1845899 D 741091 CDS YP_004212436.1 322832409 10212697 1847506..1848447 1 NC_015061.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: yen:YE2422 oxidoreductase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 1848447 10212697 Rahaq_1691 Rahnella sp. Y9602 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_004212436.1 1847506 D 741091 CDS YP_004212437.1 322832410 10212698 1848516..1849256 1 NC_015061.1 KEGG: spe:Spro_1934 hydrolase; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; PHP domain-containing protein 1849256 10212698 Rahaq_1692 Rahnella sp. Y9602 PHP domain-containing protein YP_004212437.1 1848516 D 741091 CDS YP_004212438.1 322832411 10212699 1849317..1849901 1 NC_015061.1 KEGG: spe:Spro_1935 cytoplasmic chaperone TorD family protein; cytoplasmic chaperone TorD family protein 1849901 10212699 Rahaq_1693 Rahnella sp. Y9602 cytoplasmic chaperone TorD family protein YP_004212438.1 1849317 D 741091 CDS YP_004212439.1 322832412 10212700 complement(1849975..1850538) 1 NC_015061.1 KEGG: yen:YE2419 hypothetical protein; hypothetical protein 1850538 10212700 Rahaq_1694 Rahnella sp. Y9602 hypothetical protein YP_004212439.1 1849975 R 741091 CDS YP_004212440.1 322832413 10212701 complement(1850689..1851336) 1 NC_015061.1 KEGG: cro:ROD_11241 glutaredoxin 2; TIGRFAM: glutaredoxin, GrxB family; PFAM: glutaredoxin 2 domain protein; Glutathione S-transferase domain; GrxB family glutaredoxin 1851336 10212701 Rahaq_1695 Rahnella sp. Y9602 GrxB family glutaredoxin YP_004212440.1 1850689 R 741091 CDS YP_004212441.1 322832414 10212702 complement(1851514..1852719) 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE2418 multidrug resistance protein MdtH; major facilitator superfamily protein 1852719 10212702 Rahaq_1696 Rahnella sp. Y9602 major facilitator superfamily protein YP_004212441.1 1851514 R 741091 CDS YP_004212442.1 322832415 10212703 1852932..1853519 1 NC_015061.1 KEGG: spe:Spro_2795 ribosomal-protein-S5-alanine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; Ribosomal-protein-alanine N-acetyltransferase 1853519 10212703 Rahaq_1697 Rahnella sp. Y9602 Ribosomal-protein-alanine N-acetyltransferase YP_004212442.1 1852932 D 741091 CDS YP_004212443.1 322832416 10212704 1853530..1854189 1 NC_015061.1 PFAM: protein of unknown function DUF480; KEGG: pwa:Pecwa_2081 hypothetical protein; hypothetical protein 1854189 10212704 Rahaq_1698 Rahnella sp. Y9602 hypothetical protein YP_004212443.1 1853530 D 741091 CDS YP_004212444.1 322832417 10212705 1854202..1855113 1 NC_015061.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: spe:Spro_2793 oxidoreductase domain-containing protein; oxidoreductase domain-containing protein 1855113 10212705 Rahaq_1699 Rahnella sp. Y9602 oxidoreductase domain-containing protein YP_004212444.1 1854202 D 741091 CDS YP_004212445.1 322832418 10212706 1855307..1856842 1 NC_015061.1 KEGG: yen:YE2409 hypothetical protein; TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; integral membrane protein MviN 1856842 10212706 Rahaq_1700 Rahnella sp. Y9602 integral membrane protein MviN YP_004212445.1 1855307 D 741091 CDS YP_004212446.1 322832419 10212707 complement(1856905..1858638) 1 NC_015061.1 TIGRFAM: arginyl-tRNA synthetase; KEGG: spe:Spro_2791 arginyl-tRNA synthetase; arginyl-tRNA synthetase 1858638 10212707 Rahaq_1701 Rahnella sp. Y9602 arginyl-tRNA synthetase YP_004212446.1 1856905 R 741091 CDS YP_004212447.1 322832420 10212708 1858865..1859425 1 NC_015061.1 PFAM: protein of unknown function DUF991; KEGG: spe:Spro_2790 hypothetical protein; hypothetical protein 1859425 10212708 Rahaq_1702 Rahnella sp. Y9602 hypothetical protein YP_004212447.1 1858865 D 741091 CDS YP_004212448.1 322832421 10212709 complement(1859422..1860570) 1 NC_015061.1 PFAM: aminotransferase class I and II; KEGG: etr:ETAE_1428 aminotransferase class I and II; class I and II aminotransferase 1860570 10212709 Rahaq_1703 Rahnella sp. Y9602 class I and II aminotransferase YP_004212448.1 1859422 R 741091 CDS YP_004212449.1 322832422 10212710 1860684..1861442 1 NC_015061.1 PFAM: CutC family protein; KEGG: spe:Spro_2788 copper homeostasis protein CutC; CutC family protein 1861442 10212710 Rahaq_1704 Rahnella sp. Y9602 CutC family protein YP_004212449.1 1860684 D 741091 CDS YP_004212450.1 322832423 10212711 1861611..1862114 1 NC_015061.1 KEGG: ecz:ECS88_2910 conserved hypothetical protein; exported protein; hypothetical protein 1862114 10212711 Rahaq_1705 Rahnella sp. Y9602 hypothetical protein YP_004212450.1 1861611 D 741091 CDS YP_004212451.1 322832424 10212712 complement(1862174..1862290) 1 NC_015061.1 hypothetical protein 1862290 10212712 Rahaq_1706 Rahnella sp. Y9602 hypothetical protein YP_004212451.1 1862174 R 741091 CDS YP_004212452.1 322832425 10212713 complement(1862425..1862628) 1 NC_015061.1 KEGG: ebi:EbC_16730 hypothetical protein; hypothetical protein 1862628 10212713 Rahaq_1707 Rahnella sp. Y9602 hypothetical protein YP_004212452.1 1862425 R 741091 CDS YP_004212453.1 322832426 10212714 complement(1862800..1863771) 1 NC_015061.1 KEGG: yen:YE2402 hypothetical protein; TIGRFAM: methyltransferase; PFAM: methyltransferase; methyltransferase 1863771 10212714 Rahaq_1708 Rahnella sp. Y9602 methyltransferase YP_004212453.1 1862800 R 741091 CDS YP_004212454.1 322832427 10212715 complement(1863768..1864511) 1 NC_015061.1 KEGG: ypb:YPTS_2092 methyltransferase; TIGRFAM: methyltransferase; PFAM: methyltransferase type 11; methyltransferase 1864511 10212715 Rahaq_1709 Rahnella sp. Y9602 methyltransferase YP_004212454.1 1863768 R 741091 CDS YP_004212455.1 322832428 10212716 complement(1864648..1865043) 1 NC_015061.1 KEGG: ypb:YPTS_2093 hypothetical protein; hypothetical protein 1865043 10212716 Rahaq_1710 Rahnella sp. Y9602 hypothetical protein YP_004212455.1 1864648 R 741091 CDS YP_004212456.1 322832429 10212717 complement(1865155..1865973) 1 NC_015061.1 PFAM: protein of unknown function DUF72; KEGG: ypb:YPTS_2094 hypothetical protein; hypothetical protein 1865973 10212717 Rahaq_1711 Rahnella sp. Y9602 hypothetical protein YP_004212456.1 1865155 R 741091 CDS YP_004212457.1 322832430 10212718 complement(1866056..1866631) 1 NC_015061.1 PFAM: isochorismatase hydrolase; KEGG: spe:Spro_2783 hypothetical protein; isochorismatase hydrolase 1866631 10212718 Rahaq_1712 Rahnella sp. Y9602 isochorismatase hydrolase YP_004212457.1 1866056 R 741091 CDS YP_004212458.1 322832431 10212719 1866967..1868763 1 NC_015061.1 KEGG: pct:PC1_1815 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein; aspartyl-tRNA synthetase 1868763 10212719 Rahaq_1713 Rahnella sp. Y9602 aspartyl-tRNA synthetase YP_004212458.1 1866967 D 741091 CDS YP_004212459.1 322832432 10212720 1868763..1869209 1 NC_015061.1 PFAM: NUDIX hydrolase; KEGG: ypb:YPTS_2096 dATP pyrophosphohydrolase; NUDIX hydrolase 1869209 10212720 Rahaq_1714 Rahnella sp. Y9602 NUDIX hydrolase YP_004212459.1 1868763 D 741091 CDS YP_004212460.1 322832433 10212721 1869235..1869978 1 NC_015061.1 PFAM: protein of unknown function DUF28; KEGG: spe:Spro_2779 hypothetical protein; hypothetical protein 1869978 10212721 Rahaq_1715 Rahnella sp. Y9602 hypothetical protein YP_004212460.1 1869235 D 741091 CDS YP_004212461.1 322832434 10212722 1870087..1870608 1 NC_015061.1 TIGRFAM: crossover junction endodeoxyribonuclease RuvC; KEGG: dda:Dd703_2157 Holliday junction resolvase; PFAM: Crossover junction endodeoxyribonuclease RuvC; crossover junction endodeoxyribonuclease RuvC 1870608 10212722 Rahaq_1716 Rahnella sp. Y9602 crossover junction endodeoxyribonuclease RuvC YP_004212461.1 1870087 D 741091 CDS YP_004212462.1 322832435 10212723 1870696..1871310 1 NC_015061.1 TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; KEGG: spe:Spro_2777 Holliday junction DNA helicase RuvA; SMART: Helix-hairpin-helix DNA-binding class 1; Holliday junction DNA helicase RuvA 1871310 10212723 Rahaq_1717 Rahnella sp. Y9602 Holliday junction DNA helicase RuvA YP_004212462.1 1870696 D 741091 CDS YP_004212463.1 322832436 10212724 1871319..1872326 1 NC_015061.1 TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase; Holliday junction DNA helicase RuvB domain; KEGG: spe:Spro_2776 Holliday junction DNA helicase RuvB; SMART: AAA ATPase; Holliday junction DNA helicase RuvB 1872326 10212724 Rahaq_1718 Rahnella sp. Y9602 Holliday junction DNA helicase RuvB YP_004212463.1 1871319 D 741091 CDS YP_004212464.1 322832437 10212725 complement(1872373..1873695) 1 NC_015061.1 PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein; transposase IS4 family protein 1873695 10212725 Rahaq_1719 Rahnella sp. Y9602 transposase IS4 family protein YP_004212464.1 1872373 R 741091 CDS YP_004212465.1 322832438 10212726 complement(1873815..1876193) 1 NC_015061.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: esa:ESA_02100 hypothetical protein; glycoside hydrolase 1876193 10212726 Rahaq_1720 Rahnella sp. Y9602 glycoside hydrolase YP_004212465.1 1873815 R 741091 CDS YP_004212466.1 322832439 10212727 complement(1876190..1877602) 1 NC_015061.1 KEGG: enc:ECL_02391 symporter; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; sugar (Glycoside-Pentoside-Hexuronide) transporter 1877602 10212727 Rahaq_1721 Rahnella sp. Y9602 sugar (Glycoside-Pentoside-Hexuronide) transporter YP_004212466.1 1876190 R 741091 CDS YP_004212467.1 322832440 10212728 complement(1877901..1878800) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: asa:ASA_1608 LysR family transcriptional regulator; LysR family transcriptional regulator 1878800 10212728 Rahaq_1722 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004212467.1 1877901 R 741091 CDS YP_004212468.1 322832441 10212729 1878919..1879692 1 NC_015061.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: asa:ASA_1609 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1879692 10212729 Rahaq_1723 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004212468.1 1878919 D 741091 CDS YP_004212469.1 322832442 10212730 1879997..1881871 1 NC_015061.1 TIGRFAM: PTS system, beta-glucoside-specific IIABC subunit; PTS system, glucose-like IIB subunint; PTS system, glucose subfamily, IIA subunit; KEGG: eca:ECA1870 PTS system beta-glucoside-specific transporter subunits IIABC; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; PTS system beta-glucoside-specific transporter subunit IIABC 1881871 10212730 Rahaq_1724 Rahnella sp. Y9602 PTS system beta-glucoside-specific transporter subunit IIABC YP_004212469.1 1879997 D 741091 CDS YP_004212470.1 322832443 10212731 1881894..1883291 1 NC_015061.1 PFAM: glycoside hydrolase family 1; KEGG: pct:PC1_2438 glycoside hydrolase family 1; glycoside hydrolase 1883291 10212731 Rahaq_1725 Rahnella sp. Y9602 glycoside hydrolase YP_004212470.1 1881894 D 741091 CDS YP_004212471.1 322832444 10212732 1883460..1884308 1 NC_015061.1 PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: ent:Ent638_2741 transcriptional antiterminator, BglG; transcriptional antiterminator BglG 1884308 10212732 Rahaq_1726 Rahnella sp. Y9602 transcriptional antiterminator BglG YP_004212471.1 1883460 D 741091 CDS YP_004212472.1 322832445 10212733 1884539..1886020 1 NC_015061.1 PFAM: amino acid permease-associated region; KEGG: spe:Spro_1347 amino acid permease-associated region; amino acid permease 1886020 10212733 Rahaq_1727 Rahnella sp. Y9602 amino acid permease YP_004212472.1 1884539 D 741091 CDS YP_004212473.1 322832446 10212734 1886155..1886352 1 NC_015061.1 KEGG: eta:ETA_25860 hypothetical protein; hypothetical protein 1886352 10212734 Rahaq_1728 Rahnella sp. Y9602 hypothetical protein YP_004212473.1 1886155 D 741091 CDS YP_004212474.1 322832447 10212735 1886352..1887158 1 NC_015061.1 KEGG: eta:ETA_25870 hypothetical protein; hypothetical protein 1887158 10212735 Rahaq_1729 Rahnella sp. Y9602 hypothetical protein YP_004212474.1 1886352 D 741091 CDS YP_004212475.1 322832448 10212736 complement(1887179..1887868) 1 NC_015061.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pfs:PFLU2602 fumarylpyruvate hydrolase; fumarylacetoacetate (FAA) hydrolase 1887868 10212736 Rahaq_1730 Rahnella sp. Y9602 fumarylacetoacetate (FAA) hydrolase YP_004212475.1 1887179 R 741091 CDS YP_004212476.1 322832449 10212737 complement(1887961..1888755) 1 NC_015061.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mms:mma_1110 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 1888755 10212737 Rahaq_1731 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004212476.1 1887961 R 741091 CDS YP_004212477.1 322832450 10212738 1888869..1889315 1 NC_015061.1 PFAM: helix-turn-helix HxlR type; KEGG: kva:Kvar_3353 transcriptional regulator, HxlR family; HxlR family transcriptional regulator 1889315 10212738 Rahaq_1732 Rahnella sp. Y9602 HxlR family transcriptional regulator YP_004212477.1 1888869 D 741091 CDS YP_004212478.1 322832451 10212739 complement(1889494..1891521) 1 NC_015061.1 KEGG: vei:Veis_0413 peptidase S15; TIGRFAM: hydrolase CocE/NonD family protein; PFAM: X-Pro dipeptidyl-peptidase domain protein; hydrolase 1891521 10212739 Rahaq_1733 Rahnella sp. Y9602 hydrolase YP_004212478.1 1889494 R 741091 CDS YP_004212479.1 322832452 10212740 complement(1891518..1893161) 1 NC_015061.1 KEGG: vei:Veis_0412 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1893161 10212740 Rahaq_1734 Rahnella sp. Y9602 ABC transporter YP_004212479.1 1891518 R 741091 CDS YP_004212480.1 322832453 10212741 complement(1893158..1893985) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0411 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1893985 10212741 Rahaq_1735 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004212480.1 1893158 R 741091 CDS YP_004212481.1 322832454 10212742 complement(1893997..1894944) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0410 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1894944 10212742 Rahaq_1736 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004212481.1 1893997 R 741091 CDS YP_004212482.1 322832455 10212743 complement(1894944..1896527) 1 NC_015061.1 PFAM: extracellular solute-binding protein family 5; KEGG: vei:Veis_0409 extracellular solute-binding protein; family 5 extracellular solute-binding protein 1896527 10212743 Rahaq_1737 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004212482.1 1894944 R 741091 CDS YP_004212483.1 322832456 10212744 1896747..1897028 1 NC_015061.1 KEGG: oan:Oant_2780 hypothetical protein; hypothetical protein 1897028 10212744 Rahaq_1738 Rahnella sp. Y9602 hypothetical protein YP_004212483.1 1896747 D 741091 CDS YP_004212484.1 322832457 10212745 complement(1897148..1898038) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: abn:AB57_2845 glycine cleavage system transcriptional activator; LysR family transcriptional regulator 1898038 10212745 Rahaq_1739 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004212484.1 1897148 R 741091 CDS YP_004212485.1 322832458 10212746 complement(1898064..1899482) 1 NC_015061.1 KEGG: spe:Spro_1440 transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 1899482 10212746 Rahaq_1740 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004212485.1 1898064 R 741091 CDS YP_004212486.1 322832459 10212747 1899651..1899923 1 NC_015061.1 KEGG: pde:Pden_3345 hypothetical protein; hypothetical protein 1899923 10212747 Rahaq_1741 Rahnella sp. Y9602 hypothetical protein YP_004212486.1 1899651 D 741091 CDS YP_004212487.1 322832460 10212748 complement(1900068..1902098) 1 NC_015061.1 KEGG: spe:Spro_1573 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, subunit beta; PFAM: tRNA synthetase class I (M); t-RNA-binding domain-containing protein; methionyl-tRNA synthetase 1902098 10212748 Rahaq_1742 Rahnella sp. Y9602 methionyl-tRNA synthetase YP_004212487.1 1900068 R 741091 CDS YP_004212488.1 322832461 10212749 1902251..1903363 1 NC_015061.1 PFAM: ATPase-like, ParA/MinD; KEGG: spe:Spro_1574 ATPase; ParA/MinD-like ATPase 1903363 10212749 Rahaq_1743 Rahnella sp. Y9602 ParA/MinD-like ATPase YP_004212488.1 1902251 D 741091 CDS YP_004212489.1 322832462 10212750 1903510..1904151 1 NC_015061.1 TIGRFAM: uridine kinase; KEGG: sbo:SBO_0893 uridine kinase; uridine kinase 1904151 10212750 Rahaq_1744 Rahnella sp. Y9602 uridine kinase YP_004212489.1 1903510 D 741091 CDS YP_004212490.1 322832463 10212751 1904189..1904770 1 NC_015061.1 KEGG: yen:YE2782 deoxycytidine triphosphate deaminase; TIGRFAM: deoxycytidine triphosphate deaminase; PFAM: deoxyUTP pyrophosphatase; deoxycytidine triphosphate deaminase 1904770 10212751 Rahaq_1745 Rahnella sp. Y9602 deoxycytidine triphosphate deaminase YP_004212490.1 1904189 D 741091 CDS YP_004212491.1 322832464 10212752 1904814..1906664 1 NC_015061.1 PFAM: AsmA family protein; KEGG: spe:Spro_1578 assembly protein; AsmA family protein 1906664 10212752 Rahaq_1746 Rahnella sp. Y9602 AsmA family protein YP_004212491.1 1904814 D 741091 CDS YP_004212492.1 322832465 10212753 complement(1906743..1908332) 1 NC_015061.1 PFAM: Integral membrane protein TerC; CBS domain containing protein; transporter-associated region; KEGG: ypy:YPK_2549 integral membrane protein TerC; integral membrane protein TerC 1908332 10212753 Rahaq_1747 Rahnella sp. Y9602 integral membrane protein TerC YP_004212492.1 1906743 R 741091 CDS YP_004212493.1 322832466 10212754 1908795..1909682 1 NC_015061.1 KEGG: yen:YE2778 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; UTP-glucose-1-phosphate uridylyltransferase 1909682 10212754 Rahaq_1748 Rahnella sp. Y9602 UTP-glucose-1-phosphate uridylyltransferase YP_004212493.1 1908795 D 741091 CDS YP_004212494.1 322832467 10212755 1910162..1911226 1 NC_015061.1 KEGG: yen:YE0173 dTDP-D-glucose-4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-glucose 4,6-dehydratase 1911226 10212755 Rahaq_1749 Rahnella sp. Y9602 dTDP-glucose 4,6-dehydratase YP_004212494.1 1910162 D 741091 CDS YP_004212495.1 322832468 10212756 1911246..1912115 1 NC_015061.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; KEGG: eca:ECA1442 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate thymidylyltransferase 1912115 10212756 Rahaq_1750 Rahnella sp. Y9602 glucose-1-phosphate thymidylyltransferase YP_004212495.1 1911246 D 741091 CDS YP_004212496.1 322832469 10212757 1912535..1913461 1 NC_015061.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: eay:EAM_2158 UDP-glucose epimerase; NAD-dependent epimerase/dehydratase 1913461 10212757 Rahaq_1751 Rahnella sp. Y9602 NAD-dependent epimerase/dehydratase YP_004212496.1 1912535 D 741091 CDS YP_004212497.1 322832470 10212758 1913568..1914335 1 NC_015061.1 PFAM: ABC transporter; KEGG: epy:EpC_14020 O-antigen ABC transporter permease; ABC transporter 1914335 10212758 Rahaq_1752 Rahnella sp. Y9602 ABC transporter YP_004212497.1 1913568 D 741091 CDS YP_004212498.1 322832471 10212759 1914335..1915075 1 NC_015061.1 KEGG: eay:EAM_2156 O-antigen export system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1915075 10212759 Rahaq_1753 Rahnella sp. Y9602 ABC transporter YP_004212498.1 1914335 D 741091 CDS YP_004212499.1 322832472 10212760 1915110..1917002 1 NC_015061.1 PFAM: glycosyl transferase family 8; KEGG: eta:ETA_13400 glycosyl transferase; glycosyl transferase family protein 1917002 10212760 Rahaq_1754 Rahnella sp. Y9602 glycosyl transferase family protein YP_004212499.1 1915110 D 741091 CDS YP_004212500.1 322832473 10212761 1917016..1918170 1 NC_015061.1 TIGRFAM: UDP-galactopyranose mutase; KEGG: eay:EAM_2154 UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like; FAD dependent oxidoreductase; UDP-galactopyranose mutase 1918170 10212761 Rahaq_1755 Rahnella sp. Y9602 UDP-galactopyranose mutase YP_004212500.1 1917016 D 741091 CDS YP_004212501.1 322832474 10212762 1918167..1919063 1 NC_015061.1 PFAM: glycosyl transferase family 2; KEGG: epy:EpC_14060 glycosyl transferase; family 2 glycosyl transferase 1919063 10212762 Rahaq_1756 Rahnella sp. Y9602 family 2 glycosyl transferase YP_004212501.1 1918167 D 741091 CDS YP_004212502.1 322832475 10212763 1919077..1920219 1 NC_015061.1 PFAM: glycosyl transferase group 1; KEGG: ecm:EcSMS35_2263 glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 1920219 10212763 Rahaq_1757 Rahnella sp. Y9602 group 1 glycosyl transferase YP_004212502.1 1919077 D 741091 CDS YP_004212503.1 322832476 10212764 1920239..1921507 1 NC_015061.1 KEGG: gbr:Gbro_2791 hypothetical protein; hypothetical protein 1921507 10212764 Rahaq_1758 Rahnella sp. Y9602 hypothetical protein YP_004212503.1 1920239 D 741091 CDS YP_004212504.1 322832477 10212765 1921774..1923183 1 NC_015061.1 TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; KEGG: ypb:YPTS_1663 6-phosphogluconate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase domain-containing protein; 6-phosphogluconate dehydrogenase NAD-binding; 6-phosphogluconate dehydrogenase 1923183 10212765 Rahaq_1759 Rahnella sp. Y9602 6-phosphogluconate dehydrogenase YP_004212504.1 1921774 D 741091 CDS YP_004212505.1 322832478 10212766 complement(1923301..1923942) 1 NC_015061.1 KEGG: yen:YE2772 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like; phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP diphosphatase 1923942 10212766 Rahaq_1760 Rahnella sp. Y9602 phosphoribosyl-ATP diphosphatase YP_004212505.1 1923301 R 741091 CDS YP_004212506.1 322832479 10212767 complement(1923939..1924712) 1 NC_015061.1 KEGG: eok:G2583_2546 imidazole glycerol phosphate synthase subunit HisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; Imidazole glycerol phosphate synthase cyclase subunit 1924712 10212767 Rahaq_1761 Rahnella sp. Y9602 Imidazole glycerol phosphate synthase cyclase subunit YP_004212506.1 1923939 R 741091 CDS YP_004212507.1 322832480 10212768 complement(1924694..1925431) 1 NC_015061.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: spe:Spro_1611 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: histidine biosynthesis protein; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 1925431 10212768 Rahaq_1762 Rahnella sp. Y9602 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_004212507.1 1924694 R 741091 CDS YP_004212508.1 322832481 10212769 complement(1925437..1926027) 1 NC_015061.1 KEGG: spe:Spro_1612 imidazole glycerol phosphate synthase subunit HisH; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 1926027 10212769 Rahaq_1763 Rahnella sp. Y9602 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_004212508.1 1925437 R 741091 CDS YP_004212509.1 322832482 10212770 complement(1926027..1927109) 1 NC_015061.1 TIGRFAM: histidinol-phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: yen:YE2768 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; PFAM: imidazoleglycerol-phosphate dehydratase; histidinol-phosphatase 1927109 10212770 Rahaq_1764 Rahnella sp. Y9602 histidinol-phosphatase YP_004212509.1 1926027 R 741091 CDS YP_004212510.1 322832483 10212771 complement(1927106..1928239) 1 NC_015061.1 KEGG: spe:Spro_1614 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; histidinol-phosphate aminotransferase 1928239 10212771 Rahaq_1765 Rahnella sp. Y9602 histidinol-phosphate aminotransferase YP_004212510.1 1927106 R 741091 CDS YP_004212511.1 322832484 10212772 complement(1928239..1929552) 1 NC_015061.1 TIGRFAM: histidinol dehydrogenase; KEGG: ddd:Dda3937_02973 bifunctional histidinal dehydrogenase/histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; histidinol dehydrogenase 1929552 10212772 Rahaq_1766 Rahnella sp. Y9602 histidinol dehydrogenase YP_004212511.1 1928239 R 741091 CDS YP_004212512.1 322832485 10212773 complement(1929556..1930455) 1 NC_015061.1 TIGRFAM: ATP phosphoribosyltransferase; KEGG: spe:Spro_1616 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region; Histidine biosynthesis protein HisG domain; ATP phosphoribosyltransferase 1930455 10212773 Rahaq_1767 Rahnella sp. Y9602 ATP phosphoribosyltransferase YP_004212512.1 1929556 R 741091 CDS YP_004212513.1 322832486 10212774 1930981..1931805 1 NC_015061.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: spe:Spro_1617 NAD-dependent epimerase/dehydratase; 6-phosphogluconate dehydrogenase 1931805 10212774 Rahaq_1768 Rahnella sp. Y9602 6-phosphogluconate dehydrogenase YP_004212513.1 1930981 D 741091 CDS YP_004212514.1 322832487 10212775 complement(1932212..1932358) 1 NC_015061.1 hypothetical protein 1932358 10212775 Rahaq_1769 Rahnella sp. Y9602 hypothetical protein YP_004212514.1 1932212 R 741091 CDS YP_004212515.1 322832488 10212776 1933068..1933412 1 NC_015061.1 PFAM: flagellar transcriptional activator; KEGG: spe:Spro_2989 transcriptional activator FlhD; flagellar transcriptional activator 1933412 10212776 Rahaq_1770 Rahnella sp. Y9602 flagellar transcriptional activator YP_004212515.1 1933068 D 741091 CDS YP_004212516.1 322832489 10212777 1933415..1934023 1 NC_015061.1 PFAM: flagellar transcriptional activator FlhC; KEGG: spe:Spro_2988 transcriptional activator FlhC; flagellar transcriptional activator FlhC 1934023 10212777 Rahaq_1771 Rahnella sp. Y9602 flagellar transcriptional activator FlhC YP_004212516.1 1933415 D 741091 CDS YP_004212517.1 322832490 10212778 1934200..1935090 1 NC_015061.1 KEGG: ypb:YPTS_2486 flagellar motor protein MotA; flagellar motor protein MotA 1935090 10212778 Rahaq_1772 Rahnella sp. Y9602 flagellar motor protein MotA YP_004212517.1 1934200 D 741091 CDS YP_004212518.1 322832491 10212779 1935087..1936190 1 NC_015061.1 PFAM: OmpA/MotB domain protein; KEGG: ypb:YPTS_2485 flagellar motor protein MotB; OmpA/MotB domain-containing protein 1936190 10212779 Rahaq_1773 Rahnella sp. Y9602 OmpA/MotB domain-containing protein YP_004212518.1 1935087 D 741091 CDS YP_004212519.1 322832492 10212780 1936221..1938263 1 NC_015061.1 KEGG: yen:YE2577 chemotaxis protein CheA; PFAM: CheY binding protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; ATP-binding region ATPase domain protein; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; CheA signal transduction histidine kinase 1938263 10212780 Rahaq_1774 Rahnella sp. Y9602 CheA signal transduction histidine kinase YP_004212519.1 1936221 D 741091 CDS YP_004212520.1 322832493 10212781 1938346..1938843 1 NC_015061.1 KEGG: ypb:YPTS_2483 purine-binding chemotaxis protein; PFAM: CheW domain protein; SMART: CheW domain protein; chemotaxis protein CheW 1938843 10212781 Rahaq_1775 Rahnella sp. Y9602 chemotaxis protein CheW YP_004212520.1 1938346 D 741091 CDS YP_004212521.1 322832494 10212782 complement(1939445..1940590) 1 NC_015061.1 PFAM: lambda integrase ; integrase family protein; KEGG: kpe:KPK_2863 site-specific recombinase, phage integrase family; lambda integrase 1940590 10212782 Rahaq_1776 Rahnella sp. Y9602 lambda integrase YP_004212521.1 1939445 R 741091 CDS YP_004212522.1 322832495 10212783 complement(1940571..1940828) 1 NC_015061.1 KEGG: kpe:KPK_2862 hypothetical protein; hypothetical protein 1940828 10212783 Rahaq_1777 Rahnella sp. Y9602 hypothetical protein YP_004212522.1 1940571 R 741091 CDS YP_004212523.1 322832496 10212784 complement(1941167..1941994) 1 NC_015061.1 PFAM: Protein of unknown function DUF2303; KEGG: pmr:PMI0900 prophage protein; hypothetical protein 1941994 10212784 Rahaq_1778 Rahnella sp. Y9602 hypothetical protein YP_004212523.1 1941167 R 741091 CDS YP_004212524.1 322832497 10212785 complement(1942030..1942401) 1 NC_015061.1 KEGG: pmr:PMI0901 prophage protein; prophage protein 1942401 10212785 Rahaq_1779 Rahnella sp. Y9602 prophage protein YP_004212524.1 1942030 R 741091 CDS YP_004212525.1 322832498 10212786 complement(1942471..1942626) 1 NC_015061.1 KEGG: eoh:ECO103_2405 TciB/TerA-like protein; TciB/TerA-like protein 1942626 10212786 Rahaq_1780 Rahnella sp. Y9602 TciB/TerA-like protein YP_004212525.1 1942471 R 741091 CDS YP_004212526.1 322832499 10212787 complement(1942623..1943048) 1 NC_015061.1 KEGG: ecy:ECSE_1671 hypothetical protein; hypothetical protein 1943048 10212787 Rahaq_1781 Rahnella sp. Y9602 hypothetical protein YP_004212526.1 1942623 R 741091 CDS YP_004212527.1 322832500 10212788 complement(1943519..1944187) 1 NC_015061.1 PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: ect:ECIAI39_4853 repressor protein phage E14; E14 prophage; Peptidase S24/S26A/S26B 1944187 10212788 Rahaq_1782 Rahnella sp. Y9602 Peptidase S24/S26A/S26B YP_004212527.1 1943519 R 741091 CDS YP_004212528.1 322832501 10212789 1944273..1944491 1 NC_015061.1 KEGG: ecj:JW5169 predicted DNA-binding transcriptional regulator; DNA-binding transcriptional regulator 1944491 10212789 Rahaq_1783 Rahnella sp. Y9602 DNA-binding transcriptional regulator YP_004212528.1 1944273 D 741091 CDS YP_004212529.1 322832502 10212790 1944520..1945053 1 NC_015061.1 KEGG: eum:ECUMN_0869 nucleic acid-binding protein; E14 prophage; nucleic acid-binding protein; E14 prophage 1945053 10212790 Rahaq_1784 Rahnella sp. Y9602 nucleic acid-binding protein; E14 prophage YP_004212529.1 1944520 D 741091 CDS YP_004212530.1 322832503 10212791 1945061..1945255 1 NC_015061.1 KEGG: ppw:PputW619_2168 peptidase S8/S53 subtilisin kexin sedolisin; hypothetical protein 1945255 10212791 Rahaq_1785 Rahnella sp. Y9602 hypothetical protein YP_004212530.1 1945061 D 741091 CDS YP_004212531.1 322832504 10212792 1945259..1946266 1 NC_015061.1 KEGG: cro:ROD_26171 hypothetical protein; hypothetical protein 1946266 10212792 Rahaq_1786 Rahnella sp. Y9602 hypothetical protein YP_004212531.1 1945259 D 741091 CDS YP_004212532.1 322832505 10212793 1946263..1947204 1 NC_015061.1 PFAM: MT-A70 family protein; KEGG: yen:YE2361 adenine-specific modification methylase; MT-A70 family protein 1947204 10212793 Rahaq_1787 Rahnella sp. Y9602 MT-A70 family protein YP_004212532.1 1946263 D 741091 CDS YP_004212533.1 322832506 10212794 1947201..1949198 1 NC_015061.1 PFAM: C-5 cytosine-specific DNA methylase; KEGG: cro:ROD_26151 prophage DNA cytosine methylase; C-5 cytosine-specific DNA methylase 1949198 10212794 Rahaq_1788 Rahnella sp. Y9602 C-5 cytosine-specific DNA methylase YP_004212533.1 1947201 D 741091 CDS YP_004212534.1 322832507 10212795 1949195..1949356 1 NC_015061.1 hypothetical protein 1949356 10212795 Rahaq_1789 Rahnella sp. Y9602 hypothetical protein YP_004212534.1 1949195 D 741091 CDS YP_004212535.1 322832508 10212796 1949347..1949721 1 NC_015061.1 PFAM: endodeoxyribonuclease RusA; KEGG: sec:SC1203 crossover junction endodeoxyribonuclease; endodeoxyribonuclease RusA 1949721 10212796 Rahaq_1790 Rahnella sp. Y9602 endodeoxyribonuclease RusA YP_004212535.1 1949347 D 741091 CDS YP_004212536.1 322832509 10212797 1949736..1950431 1 NC_015061.1 PFAM: phage antirepressor protein; Phage regulatory protein, Rha-like; KEGG: pmr:PMI0910 phage antirepressor; phage antirepressor protein 1950431 10212797 Rahaq_1791 Rahnella sp. Y9602 phage antirepressor protein YP_004212536.1 1949736 D 741091 CDS YP_004212537.1 322832510 10212798 1950428..1951441 1 NC_015061.1 SMART: HNH nuclease; KEGG: epy:EpC_20670 conserved uncharacterized protein; HNH nuclease 1951441 10212798 Rahaq_1792 Rahnella sp. Y9602 HNH nuclease YP_004212537.1 1950428 D 741091 CDS YP_004212538.1 322832511 10212799 1951458..1951856 1 NC_015061.1 PFAM: antitermination Q family protein; KEGG: ecr:ECIAI1_2652 antitermination protein Q (P5); antitermination Q family protein 1951856 10212799 Rahaq_1793 Rahnella sp. Y9602 antitermination Q family protein YP_004212538.1 1951458 D 741091 CDS YP_004212539.1 322832512 10212800 1951946..1952227 1 NC_015061.1 KEGG: tte:TTE1424 flagellar biosynthesis protein FliR; hypothetical protein 1952227 10212800 Rahaq_1794 Rahnella sp. Y9602 hypothetical protein YP_004212539.1 1951946 D 741091 CDS YP_004212540.1 322832513 10212801 1952513..1952764 1 NC_015061.1 KEGG: eic:NT01EI_1431 hypothetical protein; hypothetical protein 1952764 10212801 Rahaq_1795 Rahnella sp. Y9602 hypothetical protein YP_004212540.1 1952513 D 741091 CDS YP_004212541.1 322832514 10212802 1953368..1953637 1 NC_015061.1 KEGG: sew:SeSA_A0628 bacteriophage protein; bacteriophage protein 1953637 10212802 Rahaq_1796 Rahnella sp. Y9602 bacteriophage protein YP_004212541.1 1953368 D 741091 CDS YP_004212542.1 322832515 10212803 1953639..1954169 1 NC_015061.1 KEGG: sgl:SG1681 phage lysozyme lysis protein; PFAM: glycoside hydrolase family 24; lysozyme 1954169 10212803 Rahaq_1797 Rahnella sp. Y9602 lysozyme YP_004212542.1 1953639 D 741091 CDS YP_004212543.1 322832516 10212804 1954162..1954668 1 NC_015061.1 PFAM: lysis protein; KEGG: xbo:XBJ1_1386 endopeptidase; lysis protein 1954668 10212804 Rahaq_1798 Rahnella sp. Y9602 lysis protein YP_004212543.1 1954162 D 741091 CDS YP_004212544.1 322832517 10212805 1954769..1954978 1 NC_015061.1 KEGG: pam:PANA_1758 hypothetical protein; hypothetical protein 1954978 10212805 Rahaq_1799 Rahnella sp. Y9602 hypothetical protein YP_004212544.1 1954769 D 741091 CDS YP_004212545.1 322832518 10212806 1955050..1955547 1 NC_015061.1 KEGG: vpo:Kpol_1069p15 hypothetical protein; hypothetical protein 1955547 10212806 Rahaq_1800 Rahnella sp. Y9602 hypothetical protein YP_004212545.1 1955050 D 741091 CDS YP_004212546.1 322832519 10212807 complement(1955569..1955685) 1 NC_015061.1 hypothetical protein 1955685 10212807 Rahaq_1801 Rahnella sp. Y9602 hypothetical protein YP_004212546.1 1955569 R 741091 CDS YP_004212547.1 322832520 10212808 1955860..1956279 1 NC_015061.1 KEGG: ent:Ent638_2245 hypothetical protein; hypothetical protein 1956279 10212808 Rahaq_1802 Rahnella sp. Y9602 hypothetical protein YP_004212547.1 1955860 D 741091 CDS YP_004212548.1 322832521 10212809 complement(1956314..1956493) 1 NC_015061.1 manually curated; KEGG: sed:SeD_A0651 hypothetical protein; hypothetical protein 1956493 10212809 Rahaq_1803 Rahnella sp. Y9602 hypothetical protein YP_004212548.1 1956314 R 741091 CDS YP_004212549.1 322832522 10212810 1956602..1956955 1 NC_015061.1 manually curated; PFAM: HNH endonuclease; KEGG: ctu:Ctu_17410 hypothetical protein; SMART: HNH nuclease; HNH endonuclease 1956955 10212810 Rahaq_1804 Rahnella sp. Y9602 HNH endonuclease YP_004212549.1 1956602 D 741091 CDS YP_004212550.1 322832523 10212811 1957100..1957573 1 NC_015061.1 TIGRFAM: phage terminase, small subunit, , P27 family; KEGG: ctu:Ctu_17430 hypothetical protein; phage terminase, small subunit, , P27 family 1957573 10212811 Rahaq_1805 Rahnella sp. Y9602 phage terminase, small subunit, , P27 family YP_004212550.1 1957100 D 741091 CDS YP_004212551.1 322832524 10212812 1957577..1959307 1 NC_015061.1 PFAM: Terminase; KEGG: esa:ESA_01025 hypothetical protein; terminase 1959307 10212812 Rahaq_1806 Rahnella sp. Y9602 terminase YP_004212551.1 1957577 D 741091 CDS YP_004212552.1 322832525 10212813 1959307..1960611 1 NC_015061.1 KEGG: sew:SeSA_A4463 phage portal protein, HK97 family; TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; phage portal protein, HK97 family 1960611 10212813 Rahaq_1807 Rahnella sp. Y9602 phage portal protein, HK97 family YP_004212552.1 1959307 D 741091 CDS YP_004212553.1 322832526 10212814 1960622..1961470 1 NC_015061.1 PFAM: peptidase S14 ClpP; KEGG: esa:ESA_01027 hypothetical protein; peptidase S14 ClpP 1961470 10212814 Rahaq_1808 Rahnella sp. Y9602 peptidase S14 ClpP YP_004212553.1 1960622 D 741091 CDS YP_004212554.1 322832527 10212815 1961480..1962694 1 NC_015061.1 KEGG: ctu:Ctu_17470 hypothetical protein; hypothetical protein 1962694 10212815 Rahaq_1809 Rahnella sp. Y9602 hypothetical protein YP_004212554.1 1961480 D 741091 CDS YP_004212555.1 322832528 10212816 1962754..1963098 1 NC_015061.1 KEGG: ctu:Ctu_17490 hypothetical protein; hypothetical protein 1963098 10212816 Rahaq_1810 Rahnella sp. Y9602 hypothetical protein YP_004212555.1 1962754 D 741091 CDS YP_004212556.1 322832529 10212817 1963109..1963447 1 NC_015061.1 TIGRFAM: phage head-tail adaptor; KEGG: ent:Ent638_2233 phage head-tail adaptor; phage head-tail adaptor 1963447 10212817 Rahaq_1811 Rahnella sp. Y9602 phage head-tail adaptor YP_004212556.1 1963109 D 741091 CDS YP_004212557.1 322832530 10212818 1963444..1963890 1 NC_015061.1 TIGRFAM: phage protein, HK97 gp10 family; KEGG: esa:ESA_01032 hypothetical protein; phage protein, HK97 gp10 family 1963890 10212818 Rahaq_1812 Rahnella sp. Y9602 phage protein, HK97 gp10 family YP_004212557.1 1963444 D 741091 CDS YP_004212558.1 322832531 10212819 1963887..1964234 1 NC_015061.1 KEGG: ent:Ent638_2231 hypothetical protein; hypothetical protein 1964234 10212819 Rahaq_1813 Rahnella sp. Y9602 hypothetical protein YP_004212558.1 1963887 D 741091 CDS YP_004212559.1 322832532 10212820 1964290..1964760 1 NC_015061.1 KEGG: ent:Ent638_2230 phage major tail subunit; phage major tail subunit 1964760 10212820 Rahaq_1814 Rahnella sp. Y9602 phage major tail subunit YP_004212559.1 1964290 D 741091 CDS YP_004212560.1 322832533 10212821 1964817..1965215 1 NC_015061.1 PFAM: tail assembly chaperone; KEGG: ent:Ent638_2229 phage tail assembly chaperone; tail assembly chaperone 1965215 10212821 Rahaq_1815 Rahnella sp. Y9602 tail assembly chaperone YP_004212560.1 1964817 D 741091 CDS YP_004212561.1 322832534 10212822 1965224..1965502 1 NC_015061.1 manually curated; KEGG: ctu:Ctu_17550 hypothetical protein; hypothetical protein 1965502 10212822 Rahaq_1816 Rahnella sp. Y9602 hypothetical protein YP_004212561.1 1965224 D 741091 CDS YP_004212562.1 322832535 10212823 1965534..1968818 1 NC_015061.1 manually curated; TIGRFAM: phage tail tape measure protein, lambda family; phage tape measure protein; KEGG: ent:Ent638_2225 lambda family phage tail tape measure protein; PFAM: Tail length tape measure; phage tail tape measure protein, lambda family 1968818 10212823 Rahaq_1817 Rahnella sp. Y9602 phage tail tape measure protein, lambda family YP_004212562.1 1965534 D 741091 CDS YP_004212563.1 322832536 10212824 1968822..1969160 1 NC_015061.1 PFAM: minor tail family protein; KEGG: ent:Ent638_2224 phage minor tail family protein; minor tail family protein 1969160 10212824 Rahaq_1818 Rahnella sp. Y9602 minor tail family protein YP_004212563.1 1968822 D 741091 CDS YP_004212564.1 322832537 10212825 1969157..1970812 1 NC_015061.1 KEGG: ent:Ent638_2223 phage minor tail protein L; TIGRFAM: phage minor tail protein L; PFAM: minor tail protein L; phage minor tail protein L 1970812 10212825 Rahaq_1819 Rahnella sp. Y9602 phage minor tail protein L YP_004212564.1 1969157 D 741091 CDS YP_004212565.1 322832538 10212826 1970815..1971534 1 NC_015061.1 KEGG: enc:ECL_01713 GP19; PFAM: NLP/P60 protein; SMART: Mov34/MPN/PAD-1 family protein; NLP/P60 protein 1971534 10212826 Rahaq_1820 Rahnella sp. Y9602 NLP/P60 protein YP_004212565.1 1970815 D 741091 CDS YP_004212566.1 322832539 10212827 1971537..1972142 1 NC_015061.1 PFAM: lambda tail assembly I; KEGG: ent:Ent638_2220 bacteriophage lambda tail assembly I; lambda tail assembly I 1972142 10212827 Rahaq_1821 Rahnella sp. Y9602 lambda tail assembly I YP_004212566.1 1971537 D 741091 CDS YP_004212567.1 322832540 10212828 1972202..1975381 1 NC_015061.1 PFAM: protein of unknown function DUF1983; Fibronectin type III domain protein; KEGG: ent:Ent638_2219 fibronectin, type III domain-containing protein; hypothetical protein 1975381 10212828 Rahaq_1822 Rahnella sp. Y9602 hypothetical protein YP_004212567.1 1972202 D 741091 CDS YP_004212568.1 322832541 10212829 1975381..1976391 1 NC_015061.1 KEGG: sgl:SG1641 hypothetical protein; hypothetical protein 1976391 10212829 Rahaq_1823 Rahnella sp. Y9602 hypothetical protein YP_004212568.1 1975381 D 741091 CDS YP_004212569.1 322832542 10212830 1976467..1977747 1 NC_015061.1 KEGG: ent:Ent638_2216 hypothetical protein; hypothetical protein 1977747 10212830 Rahaq_1824 Rahnella sp. Y9602 hypothetical protein YP_004212569.1 1976467 D 741091 CDS YP_004212570.1 322832543 10212831 complement(1977908..1978984) 1 NC_015061.1 PFAM: acyltransferase 3; KEGG: ecr:ECIAI1_2620 O-acyltransferase, transmembrane; acyltransferase 1978984 10212831 Rahaq_1825 Rahnella sp. Y9602 acyltransferase YP_004212570.1 1977908 R 741091 CDS YP_004212571.1 322832544 10212832 complement(1980028..1981041) 1 NC_015061.1 KEGG: azl:AZL_016110 transcriptional regulator; PFAM: ThiJ/PfpI domain-containing protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 1981041 10212832 Rahaq_1826 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004212571.1 1980028 R 741091 CDS YP_004212572.1 322832545 10212833 1981156..1982631 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2353 major facilitator transporter; major facilitator superfamily protein 1982631 10212833 Rahaq_1827 Rahnella sp. Y9602 major facilitator superfamily protein YP_004212572.1 1981156 D 741091 CDS YP_004212573.1 322832546 10212834 1982830..1983126 1 NC_015061.1 KEGG: eca:ECA0275 hypothetical protein; hypothetical protein 1983126 10212834 Rahaq_1828 Rahnella sp. Y9602 hypothetical protein YP_004212573.1 1982830 D 741091 CDS YP_004212574.1 322832547 10212835 1983135..1983728 1 NC_015061.1 KEGG: pct:PC1_0259 hypothetical protein; hypothetical protein 1983728 10212835 Rahaq_1829 Rahnella sp. Y9602 hypothetical protein YP_004212574.1 1983135 D 741091 CDS YP_004212575.1 322832548 10212836 1983825..1985519 1 NC_015061.1 KEGG: spe:Spro_2983 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 1985519 10212836 Rahaq_1830 Rahnella sp. Y9602 methyl-accepting chemotaxis sensory transducer YP_004212575.1 1983825 D 741091 CDS YP_004212576.1 322832549 10212837 1985641..1987311 1 NC_015061.1 KEGG: spe:Spro_2982 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 1987311 10212837 Rahaq_1831 Rahnella sp. Y9602 methyl-accepting chemotaxis sensory transducer YP_004212576.1 1985641 D 741091 CDS YP_004212577.1 322832550 10212838 1987374..1988246 1 NC_015061.1 PFAM: MCP methyltransferase CheR-type; KEGG: dda:Dd703_1515 chemotaxis methyltransferase CheR; SMART: MCP methyltransferase CheR-type; chemotaxis protein CheR 1988246 10212838 Rahaq_1832 Rahnella sp. Y9602 chemotaxis protein CheR YP_004212577.1 1987374 D 741091 CDS YP_004212578.1 322832551 10212839 1988246..1989295 1 NC_015061.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: spe:Spro_2980 chemotaxis-specific methylesterase; SMART: response regulator receiver; response regulator receiver modulated CheB methylesterase 1989295 10212839 Rahaq_1833 Rahnella sp. Y9602 response regulator receiver modulated CheB methylesterase YP_004212578.1 1988246 D 741091 CDS YP_004212579.1 322832552 10212840 1989342..1989731 1 NC_015061.1 KEGG: epy:EpC_15450 chemotaxis regulatory protein CheY; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 1989731 10212840 Rahaq_1834 Rahnella sp. Y9602 response regulator receiver protein YP_004212579.1 1989342 D 741091 CDS YP_004212580.1 322832553 10212841 1989742..1990386 1 NC_015061.1 PFAM: Chemotaxis phosphatase CheZ; KEGG: spe:Spro_2978 chemotaxis regulator CheZ; chemotaxis protein CheZ 1990386 10212841 Rahaq_1835 Rahnella sp. Y9602 chemotaxis protein CheZ YP_004212580.1 1989742 D 741091 CDS YP_004212581.1 322832554 10212842 1990712..1991866 1 NC_015061.1 KEGG: yen:YE2567 flagellar biosynthesis protein FlhB; TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; flagellar biosynthetic protein FlhB 1991866 10212842 Rahaq_1836 Rahnella sp. Y9602 flagellar biosynthetic protein FlhB YP_004212581.1 1990712 D 741091 CDS YP_004212582.1 322832555 10212843 1991859..1993943 1 NC_015061.1 KEGG: yen:YE2566 flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; flagellar biosynthesis protein FlhA 1993943 10212843 Rahaq_1837 Rahnella sp. Y9602 flagellar biosynthesis protein FlhA YP_004212582.1 1991859 D 741091 CDS YP_004212583.1 322832556 10212844 1993945..1994361 1 NC_015061.1 PFAM: flagellar FlhE family protein; KEGG: enc:ECL_01420 flagellar FlhE family protein; flagellar FlhE family protein 1994361 10212844 Rahaq_1838 Rahnella sp. Y9602 flagellar FlhE family protein YP_004212583.1 1993945 D 741091 CDS YP_004212584.1 322832557 10212845 complement(1994648..1995157) 1 NC_015061.1 KEGG: sit:TM1040_3121 hypothetical protein; hypothetical protein 1995157 10212845 Rahaq_1839 Rahnella sp. Y9602 hypothetical protein YP_004212584.1 1994648 R 741091 CDS YP_004212585.1 322832558 10212846 complement(1995624..1996076) 1 NC_015061.1 PFAM: FlgN family protein; KEGG: spe:Spro_2973 FlgN family protein; FlgN family protein 1996076 10212846 Rahaq_1840 Rahnella sp. Y9602 FlgN family protein YP_004212585.1 1995624 R 741091 CDS YP_004212586.1 322832559 10212847 complement(1996126..1996428) 1 NC_015061.1 KEGG: pam:PANA_1462 FlgM; TIGRFAM: Anti-sigma-28 factor FlgM family protein; PFAM: Anti-sigma-28 factor FlgM family protein; anti-sigma-28 factor FlgM family protein 1996428 10212847 Rahaq_1841 Rahnella sp. Y9602 anti-sigma-28 factor FlgM family protein YP_004212586.1 1996126 R 741091 CDS YP_004212587.1 322832560 10212848 complement(1996588..1997370) 1 NC_015061.1 KEGG: spe:Spro_2971 SAF domain-containing protein; TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; flagella basal body P-ring formation protein FlgA 1997370 10212848 Rahaq_1842 Rahnella sp. Y9602 flagella basal body P-ring formation protein FlgA YP_004212587.1 1996588 R 741091 CDS YP_004212588.1 322832561 10212849 1997484..1997894 1 NC_015061.1 KEGG: yen:YE2560 flagellar basal body rod protein FlgB; TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; flagellar basal-body rod protein FlgB 1997894 10212849 Rahaq_1843 Rahnella sp. Y9602 flagellar basal-body rod protein FlgB YP_004212588.1 1997484 D 741091 CDS YP_004212589.1 322832562 10212850 1997901..1998305 1 NC_015061.1 KEGG: yen:YE2559 flagellar basal body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal-body rod protein FlgC 1998305 10212850 Rahaq_1844 Rahnella sp. Y9602 flagellar basal-body rod protein FlgC YP_004212589.1 1997901 D 741091 CDS YP_004212590.1 322832563 10212851 1998317..1999021 1 NC_015061.1 PFAM: flagellar hook capping protein; KEGG: esa:ESA_02272 flagellar basal body rod modification protein; flagellar hook capping protein 1999021 10212851 Rahaq_1845 Rahnella sp. Y9602 flagellar hook capping protein YP_004212590.1 1998317 D 741091 CDS YP_004212591.1 322832564 10212852 1999099..2000343 1 NC_015061.1 KEGG: yen:YE2557 flagellar hook protein FlgE; TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body FlaE domain protein; flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar hook-basal body protein 2000343 10212852 Rahaq_1846 Rahnella sp. Y9602 flagellar hook-basal body protein YP_004212591.1 1999099 D 741091 CDS YP_004212592.1 322832565 10212853 2000378..2001133 1 NC_015061.1 KEGG: spe:Spro_2966 flagellar basal body rod protein FlgF; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body protein; PFAM: flagellar basal body rod protein; flagellar basal-body rod protein FlgF 2001133 10212853 Rahaq_1847 Rahnella sp. Y9602 flagellar basal-body rod protein FlgF YP_004212592.1 2000378 D 741091 CDS YP_004212593.1 322832566 10212854 2001155..2001937 1 NC_015061.1 KEGG: ypy:YPK_2420 flagellar basal body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar basal-body rod protein FlgG 2001937 10212854 Rahaq_1848 Rahnella sp. Y9602 flagellar basal-body rod protein FlgG YP_004212593.1 2001155 D 741091 CDS YP_004212594.1 322832567 10212855 2002038..2002769 1 NC_015061.1 PFAM: flagellar L-ring protein; KEGG: ypb:YPTS_1805 flagellar basal body L-ring protein; flagellar L-ring protein 2002769 10212855 Rahaq_1849 Rahnella sp. Y9602 flagellar L-ring protein YP_004212594.1 2002038 D 741091 CDS YP_004212595.1 322832568 10212856 2002780..2003886 1 NC_015061.1 PFAM: flagellar P-ring protein; KEGG: spe:Spro_2963 flagellar basal body P-ring protein; flagellar P-ring protein 2003886 10212856 Rahaq_1850 Rahnella sp. Y9602 flagellar P-ring protein YP_004212595.1 2002780 D 741091 CDS YP_004212596.1 322832569 10212857 2003886..2004836 1 NC_015061.1 TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Flagellar protein FlgJ-like; KEGG: yen:YE2552 flagellar rod assembly protein/muramidase FlgJ; SMART: lysozyme subfamily 2; flagellar rod assembly protein/muramidase FlgJ 2004836 10212857 Rahaq_1851 Rahnella sp. Y9602 flagellar rod assembly protein/muramidase FlgJ YP_004212596.1 2003886 D 741091 CDS YP_004212597.1 322832570 10212858 2004977..2006629 1 NC_015061.1 KEGG: yen:YE2551 flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar hook-associated protein FlgK 2006629 10212858 Rahaq_1852 Rahnella sp. Y9602 flagellar hook-associated protein FlgK YP_004212597.1 2004977 D 741091 CDS YP_004212598.1 322832571 10212859 2006657..2007619 1 NC_015061.1 KEGG: ctu:Ctu_16600 flagellar hook-associated protein FlgL; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; flagellar hook-associated protein 3 2007619 10212859 Rahaq_1853 Rahnella sp. Y9602 flagellar hook-associated protein 3 YP_004212598.1 2006657 D 741091 CDS YP_004212599.1 322832572 10212860 complement(2007924..2008619) 1 NC_015061.1 PFAM: LrgB family protein; KEGG: yen:YE2791 hypothetical protein; LrgB family protein 2008619 10212860 Rahaq_1854 Rahnella sp. Y9602 LrgB family protein YP_004212599.1 2007924 R 741091 CDS YP_004212600.1 322832573 10212861 complement(2008612..2009016) 1 NC_015061.1 PFAM: LrgA family protein; KEGG: etr:ETAE_1164 hypothetical protein; LrgA family protein 2009016 10212861 Rahaq_1855 Rahnella sp. Y9602 LrgA family protein YP_004212600.1 2008612 R 741091 CDS YP_004212601.1 322832574 10212862 complement(2009376..2010221) 1 NC_015061.1 KEGG: kpu:KP1_2958 amino acid ABC transport system ATP-binding component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2010221 10212862 Rahaq_1856 Rahnella sp. Y9602 ABC transporter YP_004212601.1 2009376 R 741091 CDS YP_004212602.1 322832575 10212863 complement(2010237..2011151) 1 NC_015061.1 KEGG: spe:Spro_1185 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 2011151 10212863 Rahaq_1857 Rahnella sp. Y9602 polar amino acid ABC transporter inner membrane subunit YP_004212602.1 2010237 R 741091 CDS YP_004212603.1 322832576 10212864 complement(2011167..2011682) 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_1186 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2011682 10212864 Rahaq_1858 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004212603.1 2011167 R 741091 CDS YP_004212604.1 322832577 10212865 complement(2011698..2012630) 1 NC_015061.1 KEGG: spe:Spro_2412 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 2012630 10212865 Rahaq_1859 Rahnella sp. Y9602 family 3 extracellular solute-binding protein YP_004212604.1 2011698 R 741091 CDS YP_004212605.1 322832578 10212866 complement(2012832..2014016) 1 NC_015061.1 TIGRFAM: amidohydrolase; KEGG: spe:Spro_1188 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 2014016 10212866 Rahaq_1860 Rahnella sp. Y9602 amidohydrolase YP_004212605.1 2012832 R 741091 CDS YP_004212606.1 322832579 10212867 2014247..2015233 1 NC_015061.1 KEGG: eca:ECA2161 luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: luciferase; luciferase family oxidoreductase 2015233 10212867 Rahaq_1861 Rahnella sp. Y9602 luciferase family oxidoreductase YP_004212606.1 2014247 D 741091 CDS YP_004212607.1 322832580 10212868 2015243..2016580 1 NC_015061.1 TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; KEGG: eta:ETA_17410 monooxygenase; Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A 2016580 10212868 Rahaq_1862 Rahnella sp. Y9602 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A YP_004212607.1 2015243 D 741091 CDS YP_004212608.1 322832581 10212869 2016751..2017419 1 NC_015061.1 PFAM: regulatory protein TetR; KEGG: kpu:KP1_3577 TetR-family trancriptional regulatory protein; TetR family transcriptional regulator 2017419 10212869 Rahaq_1863 Rahnella sp. Y9602 TetR family transcriptional regulator YP_004212608.1 2016751 D 741091 CDS YP_004212609.1 322832582 10212870 2017525..2018502 1 NC_015061.1 KEGG: kpu:KP1_3576 dehydrogenase; TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; YhdH/YhfP family quinone oxidoreductase 2018502 10212870 Rahaq_1864 Rahnella sp. Y9602 YhdH/YhfP family quinone oxidoreductase YP_004212609.1 2017525 D 741091 CDS YP_004212610.1 322832583 10212871 2018695..2019666 1 NC_015061.1 KEGG: yen:YE2673 chemotaxis protein; PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver; response regulator receiver modulated CheW protein 2019666 10212871 Rahaq_1865 Rahnella sp. Y9602 response regulator receiver modulated CheW protein YP_004212610.1 2018695 D 741091 CDS YP_004212611.1 322832584 10212872 complement(2019535..2019939) 1 NC_015061.1 KEGG: bmr:BMI_I1728 hypothetical protein; hypothetical protein 2019939 10212872 Rahaq_1866 Rahnella sp. Y9602 hypothetical protein YP_004212611.1 2019535 R 741091 CDS YP_004212612.1 322832585 10212873 2020115..2020897 1 NC_015061.1 PFAM: alpha/beta hydrolase fold; KEGG: azl:AZL_d00500 3-oxoadipate enol-lactonase; alpha/beta hydrolase 2020897 10212873 Rahaq_1867 Rahnella sp. Y9602 alpha/beta hydrolase YP_004212612.1 2020115 D 741091 CDS YP_004212613.1 322832586 10212874 2021005..2021568 1 NC_015061.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: msl:Msil_3552 peptidyl-prolyl cis-trans isomerase cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 2021568 10212874 Rahaq_1868 Rahnella sp. Y9602 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_004212613.1 2021005 D 741091 CDS YP_004212614.1 322832587 10212875 2021610..2021936 1 NC_015061.1 KEGG: dda:Dd703_1411 hypothetical protein; hypothetical protein 2021936 10212875 Rahaq_1869 Rahnella sp. Y9602 hypothetical protein YP_004212614.1 2021610 D 741091 CDS YP_004212615.1 322832588 10212876 2021947..2022783 1 NC_015061.1 KEGG: dda:Dd703_1412 beta-lactamase domain protein; beta-lactamase 2022783 10212876 Rahaq_1870 Rahnella sp. Y9602 beta-lactamase YP_004212615.1 2021947 D 741091 CDS YP_004212616.1 322832589 10212877 2022976..2024190 1 NC_015061.1 PFAM: acyltransferase 3; KEGG: pwa:Pecwa_4612 acyltransferase 3; acyltransferase 2024190 10212877 Rahaq_1871 Rahnella sp. Y9602 acyltransferase YP_004212616.1 2022976 D 741091 CDS YP_004212617.1 322832590 10212878 complement(2024353..2025240) 1 NC_015061.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dda:Dd703_1413 transcriptional regulator, LysR family; LysR family transcriptional regulator 2025240 10212878 Rahaq_1872 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004212617.1 2024353 R 741091 CDS YP_004212618.1 322832591 10212879 2025708..2027135 1 NC_015061.1 TIGRFAM: 2-methylcitrate dehydratase; KEGG: bvi:Bcep1808_4405 2-methylcitrate dehydratase; PFAM: MmgE/PrpD family protein; 2-methylcitrate dehydratase 2027135 10212879 Rahaq_1873 Rahnella sp. Y9602 2-methylcitrate dehydratase YP_004212618.1 2025708 D 741091 CDS YP_004212619.1 322832592 10212880 2027184..2028326 1 NC_015061.1 KEGG: mgi:Mflv_4889 integral membrane sensor signal transduction histidine kinase; hypothetical protein 2028326 10212880 Rahaq_1874 Rahnella sp. Y9602 hypothetical protein YP_004212619.1 2027184 D 741091 CDS YP_004212620.1 322832593 10212881 2028323..2029303 1 NC_015061.1 KEGG: bfa:Bfae_28180 arylsulfatase A family protein; hypothetical protein 2029303 10212881 Rahaq_1875 Rahnella sp. Y9602 hypothetical protein YP_004212620.1 2028323 D 741091 CDS YP_004212621.1 322832594 10212882 2029332..2030714 1 NC_015061.1 KEGG: bur:Bcep18194_C6917 EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA subfamily drug resistance transporter 2030714 10212882 Rahaq_1876 Rahnella sp. Y9602 EmrB/QacA subfamily drug resistance transporter YP_004212621.1 2029332 D 741091 CDS YP_004212622.1 322832595 10212883 complement(2030794..2031711) 1 NC_015061.1 PFAM: secretion protein HlyD family protein; KEGG: kpe:KPK_B0020 auxiliary transport protein, membrane fusion protein (MFP) family; secretion protein HlyD family protein 2031711 10212883 Rahaq_1877 Rahnella sp. Y9602 secretion protein HlyD family protein YP_004212622.1 2030794 R 741091 CDS YP_004212623.1 322832596 10212884 complement(2031708..2031923) 1 NC_015061.1 PFAM: protein of unknown function DUF1656; KEGG: kpe:KPK_B0021 hypothetical protein; hypothetical protein 2031923 10212884 Rahaq_1878 Rahnella sp. Y9602 hypothetical protein YP_004212623.1 2031708 R 741091 CDS YP_004212624.1 322832597 10212885 complement(2031913..2033940) 1 NC_015061.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: kpe:KPK_B0022 fusaric acid resistance domain protein; fusaric acid resistance protein 2033940 10212885 Rahaq_1879 Rahnella sp. Y9602 fusaric acid resistance protein YP_004212624.1 2031913 R 741091 CDS YP_004212625.1 322832598 10212886 2034066..2034851 1 NC_015061.1 KEGG: kpe:KPK_B0023 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 2034851 10212886 Rahaq_1880 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004212625.1 2034066 D 741091 CDS YP_004212626.1 322832599 10212887 2035075..2036100 1 NC_015061.1 PFAM: luciferase; KEGG: ddd:Dda3937_01241 alkanal monooxygenase subunit alpha; luciferase 2036100 10212887 Rahaq_1881 Rahnella sp. Y9602 luciferase YP_004212626.1 2035075 D 741091 CDS YP_004212627.1 322832600 10212888 2036363..2038573 1 NC_015061.1 KEGG: ctu:Ctu_34980 catalase-peroxidase; TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; catalase/peroxidase HPI 2038573 10212888 Rahaq_1882 Rahnella sp. Y9602 catalase/peroxidase HPI YP_004212627.1 2036363 D 741091 CDS YP_004212628.1 322832601 10212889 complement(2038634..2040034) 1 NC_015061.1 PFAM: FAD linked oxidase domain protein; KEGG: ebi:EbC_27170 FAD-linked oxidase; FAD linked oxidase domain-containing protein 2040034 10212889 Rahaq_1883 Rahnella sp. Y9602 FAD linked oxidase domain-containing protein YP_004212628.1 2038634 R 741091 CDS YP_004212629.1 322832602 10212890 complement(2040061..2040876) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_27160 nitrate/sulfonate/bicarbonate ABC transporter permease component; binding-protein-dependent transport system inner membrane protein 2040876 10212890 Rahaq_1884 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004212629.1 2040061 R 741091 CDS YP_004212630.1 322832603 10212891 complement(2040881..2041708) 1 NC_015061.1 KEGG: ebi:EbC_27150 nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2041708 10212891 Rahaq_1885 Rahnella sp. Y9602 ABC transporter YP_004212630.1 2040881 R 741091 CDS YP_004212631.1 322832604 10212892 complement(2041705..2042688) 1 NC_015061.1 KEGG: ebi:EbC_27140 nitrate/sulfonate/bicarbonate ABC transporter permease; nitrate/sulfonate/bicarbonate ABC transporter permease 2042688 10212892 Rahaq_1886 Rahnella sp. Y9602 nitrate/sulfonate/bicarbonate ABC transporter permease YP_004212631.1 2041705 R 741091 CDS YP_004212632.1 322832605 10212893 complement(2042702..2043583) 1 NC_015061.1 PFAM: Creatininase; KEGG: ebi:EbC_27130 creatininase; creatininase 2043583 10212893 Rahaq_1887 Rahnella sp. Y9602 creatininase YP_004212632.1 2042702 R 741091 CDS YP_004212633.1 322832606 10212894 complement(2043613..2044074) 1 NC_015061.1 PFAM: Endoribonuclease L-PSP; KEGG: ebi:EbC_27120 endoribonuclease L-PSP; endoribonuclease L-PSP 2044074 10212894 Rahaq_1888 Rahnella sp. Y9602 endoribonuclease L-PSP YP_004212633.1 2043613 R 741091 CDS YP_004212634.1 322832607 10212895 complement(2044064..2045344) 1 NC_015061.1 KEGG: ebi:EbC_27110 amidohydrolase 3; amidohydrolase 2045344 10212895 Rahaq_1889 Rahnella sp. Y9602 amidohydrolase YP_004212634.1 2044064 R 741091 CDS YP_004212635.1 322832608 10212896 complement(2045365..2046339) 1 NC_015061.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: ebi:EbC_27100 vanillate O-demethylase oxidoreductase; ferredoxin 2046339 10212896 Rahaq_1890 Rahnella sp. Y9602 ferredoxin YP_004212635.1 2045365 R 741091 CDS YP_004212636.1 322832609 10212897 2046554..2047477 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebi:EbC_27090 transcriptional regulator, LysR family; LysR family transcriptional regulator 2047477 10212897 Rahaq_1891 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004212636.1 2046554 D 741091 CDS YP_004212637.1 322832610 10212898 2047740..2048729 1 NC_015061.1 KEGG: ebi:EbC_27080 nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein; nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein 2048729 10212898 Rahaq_1892 Rahnella sp. Y9602 nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein YP_004212637.1 2047740 D 741091 CDS YP_004212638.1 322832611 10212899 2048741..2050177 1 NC_015061.1 PFAM: amidohydrolase; KEGG: ebi:EbC_27070 amidohydrolase 1; amidohydrolase 2050177 10212899 Rahaq_1893 Rahnella sp. Y9602 amidohydrolase YP_004212638.1 2048741 D 741091 CDS YP_004212639.1 322832612 10212900 2050195..2051199 1 NC_015061.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: ebi:EbC_27060 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase 2051199 10212900 Rahaq_1894 Rahnella sp. Y9602 2OG-Fe(II) oxygenase YP_004212639.1 2050195 D 741091 CDS YP_004212640.1 322832613 10212901 complement(2051258..2051446) 1 NC_015061.1 KEGG: dze:Dd1591_1284 hypothetical protein; hypothetical protein 2051446 10212901 Rahaq_1895 Rahnella sp. Y9602 hypothetical protein YP_004212640.1 2051258 R 741091 CDS YP_004212641.1 322832614 10212902 2051671..2052210 1 NC_015061.1 PFAM: Protein of unknown function DUF2058; KEGG: yen:YE2637 hypothetical protein; hypothetical protein 2052210 10212902 Rahaq_1896 Rahnella sp. Y9602 hypothetical protein YP_004212641.1 2051671 D 741091 CDS YP_004212642.1 322832615 10212903 complement(2052330..2053142) 1 NC_015061.1 PFAM: PfkB domain protein; KEGG: cbe:Cbei_4798 ribokinase-like domain-containing protein; PfkB domain-containing protein 2053142 10212903 Rahaq_1897 Rahnella sp. Y9602 PfkB domain-containing protein YP_004212642.1 2052330 R 741091 CDS YP_004212643.1 322832616 10212904 complement(2053154..2054131) 1 NC_015061.1 PFAM: sugar isomerase (SIS); KEGG: cbe:Cbei_4799 sugar isomerase (SIS); sugar isomerase (SIS) 2054131 10212904 Rahaq_1898 Rahnella sp. Y9602 sugar isomerase (SIS) YP_004212643.1 2053154 R 741091 CDS YP_004212644.1 322832617 10212905 complement(2054135..2054914) 1 NC_015061.1 TIGRFAM: cationic amino acid ABC transporter periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: acd:AOLE_05515 lysine-arginine-ornithine-binding periplasmic protein precursor; SMART: extracellular solute-binding protein family 3; cationic amino acid ABC transporter periplasmic binding protein 2054914 10212905 Rahaq_1899 Rahnella sp. Y9602 cationic amino acid ABC transporter periplasmic binding protein YP_004212644.1 2054135 R 741091 CDS YP_004212645.1 322832618 10212906 2055149..2055892 1 NC_015061.1 KEGG: ddr:Deide_3p00171 transcriptional regulator, GntR; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 2055892 10212906 Rahaq_1900 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004212645.1 2055149 D 741091 CDS YP_004212646.1 322832619 10212907 complement(2055907..2056470) 1 NC_015061.1 PFAM: regulatory protein TetR; KEGG: spe:Spro_3184 TetR family transcriptional regulator; TetR family transcriptional regulator 2056470 10212907 Rahaq_1901 Rahnella sp. Y9602 TetR family transcriptional regulator YP_004212646.1 2055907 R 741091 CDS YP_004212647.1 322832620 10212908 2056604..2057695 1 NC_015061.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: ent:Ent638_2277 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 2057695 10212908 Rahaq_1902 Rahnella sp. Y9602 NADH:flavin oxidoreductase YP_004212647.1 2056604 D 741091 CDS YP_004212648.1 322832621 10212909 2057756..2058538 1 NC_015061.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ent:Ent638_2278 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2058538 10212909 Rahaq_1903 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004212648.1 2057756 D 741091 CDS YP_004212649.1 322832622 10212910 2058554..2059489 1 NC_015061.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ent:Ent638_2279 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2059489 10212910 Rahaq_1904 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004212649.1 2058554 D 741091 CDS YP_004212650.1 322832623 10212911 complement(2059689..2060474) 1 NC_015061.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: ent:Ent638_1870 pyrroline-5-carboxylate reductase; coenzyme F420-dependent NADP oxidoreductase 2060474 10212911 Rahaq_1905 Rahnella sp. Y9602 coenzyme F420-dependent NADP oxidoreductase YP_004212650.1 2059689 R 741091 CDS YP_004212651.1 322832624 10212912 complement(2060568..2062019) 1 NC_015061.1 KEGG: ent:Ent638_1871 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein 2062019 10212912 Rahaq_1906 Rahnella sp. Y9602 NodT family RND efflux system outer membrane lipoprotein YP_004212651.1 2060568 R 741091 CDS YP_004212652.1 322832625 10212913 2062109..2062723 1 NC_015061.1 PFAM: regulatory protein TetR; KEGG: spe:Spro_3141 TetR family transcriptional regulator; TetR family transcriptional regulator 2062723 10212913 Rahaq_1907 Rahnella sp. Y9602 TetR family transcriptional regulator YP_004212652.1 2062109 D 741091 CDS YP_004212653.1 322832626 10212914 2062799..2063908 1 NC_015061.1 KEGG: spe:Spro_3140 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 2063908 10212914 Rahaq_1908 Rahnella sp. Y9602 RND family efflux transporter MFP subunit YP_004212653.1 2062799 D 741091 CDS YP_004212654.1 322832627 10212915 2063905..2066994 1 NC_015061.1 PFAM: acriflavin resistance protein; KEGG: spe:Spro_3139 acriflavin resistance protein; acriflavin resistance protein 2066994 10212915 Rahaq_1909 Rahnella sp. Y9602 acriflavin resistance protein YP_004212654.1 2063905 D 741091 CDS YP_004212655.1 322832628 10212917 2067449..2068189 1 NC_015061.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebi:EbC_28560 short chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 2068189 10212917 Rahaq_1911 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004212655.1 2067449 D 741091 CDS YP_004212656.1 322832629 10212919 complement(2068738..2069514) 1 NC_015061.1 PFAM: protein of unknown function DUF980; KEGG: spe:Spro_3110 hypothetical protein; hypothetical protein 2069514 10212919 Rahaq_1912 Rahnella sp. Y9602 hypothetical protein YP_004212656.1 2068738 R 741091 CDS YP_004212657.1 322832630 10212920 complement(2069762..2071285) 1 NC_015061.1 manually curated; PFAM: EAL domain protein; KEGG: etr:ETAE_2294 hypothetical protein; SMART: EAL domain protein; diguanylate phosphodiesterase 2071285 10212920 Rahaq_1913 Rahnella sp. Y9602 diguanylate phosphodiesterase YP_004212657.1 2069762 R 741091 CDS YP_004212658.1 322832631 10212921 2071815..2072828 1 NC_015061.1 PFAM: alpha/beta hydrolase fold; KEGG: spe:Spro_2332 alpha/beta hydrolase fold; alpha/beta hydrolase 2072828 10212921 Rahaq_1914 Rahnella sp. Y9602 alpha/beta hydrolase YP_004212658.1 2071815 D 741091 CDS YP_004212659.1 322832632 10212922 complement(2072908..2073414) 1 NC_015061.1 PFAM: Phenolic acid decarboxylase; KEGG: cro:ROD_43231 phenolic acid decarboxylase; Phenolic acid decarboxylase 2073414 10212922 Rahaq_1915 Rahnella sp. Y9602 Phenolic acid decarboxylase YP_004212659.1 2072908 R 741091 CDS YP_004212660.1 322832633 10212923 2073560..2074456 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dze:Dd1591_2089 transcriptional regulator, LysR family; LysR family transcriptional regulator 2074456 10212923 Rahaq_1916 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004212660.1 2073560 D 741091 CDS YP_004212661.1 322832634 10212924 complement(2074492..2076126) 1 NC_015061.1 PFAM: protein of unknown function DUF1705; sulfatase; KEGG: etr:ETAE_1218 sulfatase; hypothetical protein 2076126 10212924 Rahaq_1917 Rahnella sp. Y9602 hypothetical protein YP_004212661.1 2074492 R 741091 CDS YP_004212662.1 322832635 10212925 2076486..2077277 1 NC_015061.1 KEGG: spe:Spro_2352 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase; PFAM: transferase hexapeptide repeat containing protein; acyl-ACP-UDP-N- acetylglucosamine O-acyltransferase 2077277 10212925 Rahaq_1918 Rahnella sp. Y9602 acyl-ACP-UDP-N- acetylglucosamine O-acyltransferase YP_004212662.1 2076486 D 741091 CDS YP_004212663.1 322832636 10212926 complement(2077321..2078343) 1 NC_015061.1 KEGG: bam:Bamb_3454 hypothetical protein; hypothetical protein 2078343 10212926 Rahaq_1919 Rahnella sp. Y9602 hypothetical protein YP_004212663.1 2077321 R 741091 CDS YP_004212664.1 322832637 10212927 complement(2078356..2079306) 1 NC_015061.1 PFAM: protein of unknown function DUF979; KEGG: bxe:Bxe_B0932 integral membrane protein; hypothetical protein 2079306 10212927 Rahaq_1920 Rahnella sp. Y9602 hypothetical protein YP_004212664.1 2078356 R 741091 CDS YP_004212665.1 322832638 10212928 complement(2079303..2079992) 1 NC_015061.1 PFAM: protein of unknown function DUF969; KEGG: bxe:Bxe_B0933 hypothetical protein; hypothetical protein 2079992 10212928 Rahaq_1921 Rahnella sp. Y9602 hypothetical protein YP_004212665.1 2079303 R 741091 CDS YP_004212666.1 322832639 10212929 complement(2080327..2080986) 1 NC_015061.1 PFAM: protein of unknown function DUF208; KEGG: spe:Spro_2683 hypothetical protein; hypothetical protein 2080986 10212929 Rahaq_1922 Rahnella sp. Y9602 hypothetical protein YP_004212666.1 2080327 R 741091 CDS YP_004212667.1 322832640 10212930 2081170..2082180 1 NC_015061.1 KEGG: pct:PC1_0690 hypothetical protein; hypothetical protein 2082180 10212930 Rahaq_1923 Rahnella sp. Y9602 hypothetical protein YP_004212667.1 2081170 D 741091 CDS YP_004212668.1 322832641 10212931 2082387..2083445 1 NC_015061.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: pap:PSPA7_2965 alcohol dehydrogenase; molecular chaperone GroES 2083445 10212931 Rahaq_1924 Rahnella sp. Y9602 molecular chaperone GroES YP_004212668.1 2082387 D 741091 CDS YP_004212669.1 322832642 10212932 2083646..2083984 1 NC_015061.1 KEGG: spe:Spro_1812 hypothetical protein; hypothetical protein 2083984 10212932 Rahaq_1925 Rahnella sp. Y9602 hypothetical protein YP_004212669.1 2083646 D 741091 CDS YP_004212670.1 322832643 10212933 2084084..2085007 1 NC_015061.1 PFAM: Ion transport protein; KEGG: spe:Spro_3053 ion transport protein; Ion transport protein 2085007 10212933 Rahaq_1926 Rahnella sp. Y9602 Ion transport protein YP_004212670.1 2084084 D 741091 CDS YP_004212671.1 322832644 10212934 2085306..2085515 1 NC_015061.1 KEGG: yen:YE2590 cold shock-like protein CspC2; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock protein 2085515 10212934 Rahaq_1927 Rahnella sp. Y9602 cold-shock protein YP_004212671.1 2085306 D 741091 CDS YP_004212672.1 322832645 10212935 complement(2085523..2085741) 1 NC_015061.1 hypothetical protein 2085741 10212935 Rahaq_1928 Rahnella sp. Y9602 hypothetical protein YP_004212672.1 2085523 R 741091 CDS YP_004212673.1 322832646 10212936 2085941..2086138 1 NC_015061.1 PFAM: Dextransucrase DSRB; KEGG: yen:YE2589 hypothetical protein; Dextransucrase DSRB 2086138 10212936 Rahaq_1929 Rahnella sp. Y9602 Dextransucrase DSRB YP_004212673.1 2085941 D 741091 CDS YP_004212674.1 322832647 10212937 complement(2086242..2087942) 1 NC_015061.1 KEGG: yen:YE2588 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 2087942 10212937 Rahaq_1930 Rahnella sp. Y9602 methyl-accepting chemotaxis sensory transducer YP_004212674.1 2086242 R 741091 CDS YP_004212675.1 322832648 10212938 complement(2088192..2088884) 1 NC_015061.1 KEGG: pam:PANA_2308 RcsA; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; LuxR family transcriptional regulator 2088884 10212938 Rahaq_1931 Rahnella sp. Y9602 LuxR family transcriptional regulator YP_004212675.1 2088192 R 741091 CDS YP_004212676.1 322832649 10212939 complement(2089196..2090386) 1 NC_015061.1 PFAM: glycosyl hydrolase family 88; KEGG: cko:CKO_04418 hypothetical protein; glycosyl hydrolase family protein 2090386 10212939 Rahaq_1932 Rahnella sp. Y9602 glycosyl hydrolase family protein YP_004212676.1 2089196 R 741091 CDS YP_004212677.1 322832650 10212940 complement(2090383..2091672) 1 NC_015061.1 TIGRFAM: oligosaccharide/H+ symporter, major facilitator superfamily (MFS); KEGG: ctu:Ctu_14690 hypothetical protein; oligosaccharide/H+ symporter, major facilitator superfamily (MFS) 2091672 10212940 Rahaq_1933 Rahnella sp. Y9602 oligosaccharide/H+ symporter, major facilitator superfamily (MFS) YP_004212677.1 2090383 R 741091 CDS YP_004212678.1 322832651 10212941 complement(2091700..2093538) 1 NC_015061.1 PFAM: Uncharacterised conserved protein UCP014753; KEGG: cro:ROD_35751 hypothetical protein; hypothetical protein 2093538 10212941 Rahaq_1934 Rahnella sp. Y9602 hypothetical protein YP_004212678.1 2091700 R 741091 CDS YP_004212679.1 322832652 10212942 2093799..2094650 1 NC_015061.1 KEGG: ctu:Ctu_14710 hypothetical protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 2094650 10212942 Rahaq_1935 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004212679.1 2093799 D 741091 CDS YP_004212680.1 322832653 10212943 complement(2094647..2096029) 1 NC_015061.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: spe:Spro_3047 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 2096029 10212943 Rahaq_1936 Rahnella sp. Y9602 L-carnitine dehydratase/bile acid-inducible protein F YP_004212680.1 2094647 R 741091 CDS YP_004212681.1 322832654 10212944 2096448..2098106 1 NC_015061.1 PFAM: periplasmic glucan biosynthesis protein MdoG; KEGG: set:SEN1430 glucan biosynthesis protein D; periplasmic glucan biosynthesis protein MdoG 2098106 10212944 Rahaq_1937 Rahnella sp. Y9602 periplasmic glucan biosynthesis protein MdoG YP_004212681.1 2096448 D 741091 CDS YP_004212682.1 322832655 10212945 complement(2098390..2098572) 1 NC_015061.1 KEGG: spe:Spro_3041 hypothetical protein; hypothetical protein 2098572 10212945 Rahaq_1938 Rahnella sp. Y9602 hypothetical protein YP_004212682.1 2098390 R 741091 CDS YP_004212683.1 322832656 10212946 2098963..2100060 1 NC_015061.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: ebi:EbC_25200 glycerol dehydrogenase; iron-containing alcohol dehydrogenase 2100060 10212946 Rahaq_1939 Rahnella sp. Y9602 iron-containing alcohol dehydrogenase YP_004212683.1 2098963 D 741091 CDS YP_004212684.1 322832657 10212947 complement(2100278..2101573) 1 NC_015061.1 PFAM: protein of unknown function DUF445; KEGG: pam:PANA_0512 YjiN; hypothetical protein 2101573 10212947 Rahaq_1940 Rahnella sp. Y9602 hypothetical protein YP_004212684.1 2100278 R 741091 CDS YP_004212685.1 322832658 10212948 complement(2101573..2102250) 1 NC_015061.1 PFAM: LysR substrate-binding; KEGG: bmj:BMULJ_04382 LysR family transcriptional regulator; LysR family transcriptional regulator 2102250 10212948 Rahaq_1941 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004212685.1 2101573 R 741091 CDS YP_004212686.1 322832659 10212950 2102531..2102662 1 NC_015061.1 hypothetical protein 2102662 10212950 Rahaq_1943 Rahnella sp. Y9602 hypothetical protein YP_004212686.1 2102531 D 741091 CDS YP_004212687.1 322832660 10212951 2102614..2104275 1 NC_015061.1 TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; KEGG: pwa:Pecwa_3315 multidrug transporter membrane component/ATP-binding component; SMART: AAA ATPase; cyclic peptide transporter 2104275 10212951 Rahaq_1944 Rahnella sp. Y9602 cyclic peptide transporter YP_004212687.1 2102614 D 741091 CDS YP_004212688.1 322832661 10212952 2104300..2105115 1 NC_015061.1 KEGG: esa:ESA_03469 hypothetical protein; hypothetical protein 2105115 10212952 Rahaq_1945 Rahnella sp. Y9602 hypothetical protein YP_004212688.1 2104300 D 741091 CDS YP_004212689.1 322832662 10212953 2105348..2107774 1 NC_015061.1 PFAM: MscS Mechanosensitive ion channel; KEGG: pct:PC1_2869 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 2107774 10212953 Rahaq_1946 Rahnella sp. Y9602 mechanosensitive ion channel protein MscS YP_004212689.1 2105348 D 741091 CDS YP_004212690.1 322832663 10212954 complement(2107987..2111118) 1 NC_015061.1 KEGG: yen:YE3630 cation efflux system protein; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; CzcA family heavy metal efflux pump 2111118 10212954 Rahaq_1947 Rahnella sp. Y9602 CzcA family heavy metal efflux pump YP_004212690.1 2107987 R 741091 CDS YP_004212691.1 322832664 10212955 complement(2111115..2112359) 1 NC_015061.1 KEGG: yen:YE3629 efflux system protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: biotin/lipoyl attachment domain-containing protein; RND family efflux transporter MFP subunit 2112359 10212955 Rahaq_1948 Rahnella sp. Y9602 RND family efflux transporter MFP subunit YP_004212691.1 2111115 R 741091 CDS YP_004212692.1 322832665 10212956 complement(2112359..2113612) 1 NC_015061.1 PFAM: outer membrane efflux protein; KEGG: yen:YE3628 outer membrane efflux protein; outer membrane efflux protein 2113612 10212956 Rahaq_1949 Rahnella sp. Y9602 outer membrane efflux protein YP_004212692.1 2112359 R 741091 CDS YP_004212693.1 322832666 10212957 complement(2113627..2113962) 1 NC_015061.1 KEGG: yen:YE3627 hypothetical protein; hypothetical protein 2113962 10212957 Rahaq_1950 Rahnella sp. Y9602 hypothetical protein YP_004212693.1 2113627 R 741091 CDS YP_004212694.1 322832667 10212958 complement(2114065..2114484) 1 NC_015061.1 KEGG: spe:Spro_3366 hypothetical protein; hypothetical protein 2114484 10212958 Rahaq_1951 Rahnella sp. Y9602 hypothetical protein YP_004212694.1 2114065 R 741091 CDS YP_004212695.1 322832668 10212959 complement(2114662..2115669) 1 NC_015061.1 KEGG: spe:Spro_1621 Mg2 transporter protein CorA family protein; TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; magnesium and cobalt transport protein CorA 2115669 10212959 Rahaq_1952 Rahnella sp. Y9602 magnesium and cobalt transport protein CorA YP_004212695.1 2114662 R 741091 CDS YP_004212696.1 322832669 10212960 complement(2115788..2116621) 1 NC_015061.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pau:PA14_46420 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2116621 10212960 Rahaq_1953 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004212696.1 2115788 R 741091 CDS YP_004212697.1 322832670 10212961 2116785..2117726 1 NC_015061.1 KEGG: bpy:Bphyt_2008 transcriptional regulator, AraC family; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 2117726 10212961 Rahaq_1954 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004212697.1 2116785 D 741091 CDS YP_004212698.1 322832671 10212962 complement(2117734..2119416) 1 NC_015061.1 KEGG: ebi:EbC_14400 RND efflux system, outer membrane lipoprotein, NodT; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein 2119416 10212962 Rahaq_1955 Rahnella sp. Y9602 NodT family RND efflux system outer membrane lipoprotein YP_004212698.1 2117734 R 741091 CDS YP_004212699.1 322832672 10212963 complement(2119400..2120968) 1 NC_015061.1 KEGG: enc:ECL_02910 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA subfamily drug resistance transporter 2120968 10212963 Rahaq_1956 Rahnella sp. Y9602 EmrB/QacA subfamily drug resistance transporter YP_004212699.1 2119400 R 741091 CDS YP_004212700.1 322832673 10212964 complement(2120965..2122155) 1 NC_015061.1 PFAM: secretion protein HlyD family protein; KEGG: enc:ECL_02911 multidrug resistance protein K; secretion protein HlyD family protein 2122155 10212964 Rahaq_1957 Rahnella sp. Y9602 secretion protein HlyD family protein YP_004212700.1 2120965 R 741091 CDS YP_004212701.1 322832674 10212965 2122435..2123346 1 NC_015061.1 KEGG: sgl:SG1151 transport protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter 2123346 10212965 Rahaq_1958 Rahnella sp. Y9602 cation diffusion facilitator family transporter YP_004212701.1 2122435 D 741091 CDS YP_004212702.1 322832675 10212966 complement(2123517..2124947) 1 NC_015061.1 PFAM: Alkaline phosphatase; KEGG: spe:Spro_1528 alkaline phosphatase; SMART: Alkaline phosphatase; alkaline phosphatase 2124947 10212966 Rahaq_1959 Rahnella sp. Y9602 alkaline phosphatase YP_004212702.1 2123517 R 741091 CDS YP_004212703.1 322832676 10212967 complement(2125720..2126742) 1 NC_015061.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding lysin domain; KEGG: etr:ETAE_3093 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 2126742 10212967 Rahaq_1960 Rahnella sp. Y9602 ErfK/YbiS/YcfS/YnhG family protein YP_004212703.1 2125720 R 741091 CDS YP_004212704.1 322832677 10212968 complement(2126902..2128455) 1 NC_015061.1 KEGG: pfl:PFL_0259 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA subfamily drug resistance transporter 2128455 10212968 Rahaq_1961 Rahnella sp. Y9602 EmrB/QacA subfamily drug resistance transporter YP_004212704.1 2126902 R 741091 CDS YP_004212705.1 322832678 10212969 2128537..2129661 1 NC_015061.1 PFAM: secretion protein HlyD family protein; KEGG: pfl:PFL_0258 HlyD family secretion protein; secretion protein HlyD family protein 2129661 10212969 Rahaq_1962 Rahnella sp. Y9602 secretion protein HlyD family protein YP_004212705.1 2128537 D 741091 CDS YP_004212706.1 322832679 10212970 2129699..2130289 1 NC_015061.1 PFAM: regulatory protein TetR; KEGG: cak:Caul_5150 TetR family transcriptional regulator; TetR family transcriptional regulator 2130289 10212970 Rahaq_1963 Rahnella sp. Y9602 TetR family transcriptional regulator YP_004212706.1 2129699 D 741091 CDS YP_004212707.1 322832680 10212971 complement(2130349..2132460) 1 NC_015061.1 KEGG: spe:Spro_2736 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; TonB-dependent siderophore receptor 2132460 10212971 Rahaq_1964 Rahnella sp. Y9602 TonB-dependent siderophore receptor YP_004212707.1 2130349 R 741091 CDS YP_004212708.1 322832681 10212972 2132812..2133495 1 NC_015061.1 PFAM: O-methyltransferase family 3; KEGG: kpe:KPK_2982 O-methyltransferase family protein; O-methyltransferase family protein 2133495 10212972 Rahaq_1965 Rahnella sp. Y9602 O-methyltransferase family protein YP_004212708.1 2132812 D 741091 CDS YP_004212709.1 322832682 10212973 complement(2133502..2135463) 1 NC_015061.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: ddc:Dd586_2493 glycoside hydrolase family 3 domain protein; glycoside hydrolase 2135463 10212973 Rahaq_1966 Rahnella sp. Y9602 glycoside hydrolase YP_004212709.1 2133502 R 741091 CDS YP_004212710.1 322832683 10212974 complement(2135558..2136076) 1 NC_015061.1 PFAM: Chromate transporter; KEGG: spe:Spro_2328 chromate transporter; chromate transporter 2136076 10212974 Rahaq_1967 Rahnella sp. Y9602 chromate transporter YP_004212710.1 2135558 R 741091 CDS YP_004212711.1 322832684 10212975 complement(2136076..2136660) 1 NC_015061.1 PFAM: Chromate transporter; KEGG: spe:Spro_2327 chromate transporter; chromate transporter 2136660 10212975 Rahaq_1968 Rahnella sp. Y9602 chromate transporter YP_004212711.1 2136076 R 741091 CDS YP_004212712.1 322832685 10212976 2136788..2137699 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2326 LysR family transcriptional regulator; LysR family transcriptional regulator 2137699 10212976 Rahaq_1969 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004212712.1 2136788 D 741091 CDS YP_004212713.1 322832686 10212977 complement(2137696..2138049) 1 NC_015061.1 SMART: regulatory protein ArsR; KEGG: yen:YE0809 ArsR family transcriptional regulator; regulatory protein ArsR 2138049 10212977 Rahaq_1970 Rahnella sp. Y9602 regulatory protein ArsR YP_004212713.1 2137696 R 741091 CDS YP_004212714.1 322832687 10212978 2138287..2140392 1 NC_015061.1 KEGG: yen:YE0808 elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein; translation elongation factor G 2140392 10212978 Rahaq_1971 Rahnella sp. Y9602 translation elongation factor G YP_004212714.1 2138287 D 741091 CDS YP_004212715.1 322832688 10212979 2140355..2140516 1 NC_015061.1 KEGG: msy:MS53_0229 phase-variable hemagglutinin; phase-variable hemagglutinin 2140516 10212979 Rahaq_1972 Rahnella sp. Y9602 phase-variable hemagglutinin YP_004212715.1 2140355 D 741091 CDS YP_004212716.1 322832689 10212980 2140491..2140679 1 NC_015061.1 KEGG: vfm:VFMJ11_A0650 CcdB antidote CcdA; CcdB antidote CcdA 2140679 10212980 Rahaq_1973 Rahnella sp. Y9602 CcdB antidote CcdA YP_004212716.1 2140491 D 741091 CDS YP_004212717.1 322832690 10212981 complement(2140735..2141424) 1 NC_015061.1 KEGG: spe:Spro_1813 TrpR binding protein WrbA; TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; flavoprotein WrbA 2141424 10212981 Rahaq_1974 Rahnella sp. Y9602 flavoprotein WrbA YP_004212717.1 2140735 R 741091 CDS YP_004212718.1 322832691 10212983 complement(2141855..2142058) 1 NC_015061.1 PFAM: protein of unknown function DUF1233 excisionase; KEGG: sed:SeD_A1075 excisionase; hypothetical protein 2142058 10212983 Rahaq_1976 Rahnella sp. Y9602 hypothetical protein YP_004212718.1 2141855 R 741091 CDS YP_004212719.1 322832692 10212984 2142393..2142842 1 NC_015061.1 KEGG: kva:Kvar_0973 hypothetical protein; hypothetical protein 2142842 10212984 Rahaq_1977 Rahnella sp. Y9602 hypothetical protein YP_004212719.1 2142393 D 741091 CDS YP_004212720.1 322832693 10212985 2142842..2143156 1 NC_015061.1 PFAM: protein of unknown function DUF1493; KEGG: pwa:Pecwa_0940 protein of unknown function DUF1493; hypothetical protein 2143156 10212985 Rahaq_1978 Rahnella sp. Y9602 hypothetical protein YP_004212720.1 2142842 D 741091 CDS YP_004212721.1 322832694 10212986 complement(2143182..2143664) 1 NC_015061.1 KEGG: ses:SARI_00061 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; type VI secretion system effector 2143664 10212986 Rahaq_1979 Rahnella sp. Y9602 type VI secretion system effector YP_004212721.1 2143182 R 741091 CDS YP_004212722.1 322832695 10212987 complement(2143966..2144118) 1 NC_015061.1 KEGG: psa:PST_2721 TrpR binding protein WrbA; hypothetical protein 2144118 10212987 Rahaq_1980 Rahnella sp. Y9602 hypothetical protein YP_004212722.1 2143966 R 741091 CDS YP_004212723.1 322832696 10212988 complement(2144335..2144559) 1 NC_015061.1 KEGG: cfa:477766 protein phosphatase 1, regulatory (inhibitor) subunit 3C; hypothetical protein 2144559 10212988 Rahaq_1981 Rahnella sp. Y9602 hypothetical protein YP_004212723.1 2144335 R 741091 CDS YP_004212724.1 322832697 10212989 complement(2144556..2144972) 1 NC_015061.1 KEGG: ecg:E2348C_0424 hypothetical protein; hypothetical protein 2144972 10212989 Rahaq_1982 Rahnella sp. Y9602 hypothetical protein YP_004212724.1 2144556 R 741091 CDS YP_004212725.1 322832698 10212990 complement(2145022..2146410) 1 NC_015061.1 PFAM: YadA domain-containing protein; KEGG: yen:YE1873 hypothetical protein; YadA domain-containing protein 2146410 10212990 Rahaq_1983 Rahnella sp. Y9602 YadA domain-containing protein YP_004212725.1 2145022 R 741091 CDS YP_004212726.1 322832699 10212991 2146741..2147067 1 NC_015061.1 KEGG: sdy:SDY_0412 hypothetical protein; hypothetical protein 2147067 10212991 Rahaq_1984 Rahnella sp. Y9602 hypothetical protein YP_004212726.1 2146741 D 741091 CDS YP_004212727.1 322832700 10212992 complement(2147169..2147474) 1 NC_015061.1 PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: ebi:EbC_26060 ethyl tert-butyl ether degradation protein; ethyl tert-butyl ether degradation EthD 2147474 10212992 Rahaq_1985 Rahnella sp. Y9602 ethyl tert-butyl ether degradation EthD YP_004212727.1 2147169 R 741091 CDS YP_004212728.1 322832701 10212993 2147628..2149007 1 NC_015061.1 PFAM: sodium/hydrogen exchanger; KEGG: ebi:EbC_26080 sodium/hydrogen exchanger; sodium/hydrogen exchanger 2149007 10212993 Rahaq_1986 Rahnella sp. Y9602 sodium/hydrogen exchanger YP_004212728.1 2147628 D 741091 CDS YP_004212729.1 322832702 10212994 complement(2149052..2149837) 1 NC_015061.1 PFAM: ABC transporter; KEGG: yen:YE2390 high-affinity zinc transporter membrane component; ABC transporter 2149837 10212994 Rahaq_1987 Rahnella sp. Y9602 ABC transporter YP_004212729.1 2149052 R 741091 CDS YP_004212730.1 322832703 10212995 complement(2149834..2150592) 1 NC_015061.1 manually curated; PFAM: ABC transporter related; KEGG: spe:Spro_2774 high-affinity zinc transporter ATPase; SMART: AAA ATPase; ABC transporter 2150592 10212995 Rahaq_1988 Rahnella sp. Y9602 ABC transporter YP_004212730.1 2149834 R 741091 CDS YP_004212731.1 322832704 10212996 2150604..2151620 1 NC_015061.1 KEGG: spe:Spro_2773 high-affinity zinc transporter periplasmic component; manually curated; PFAM: periplasmic solute binding protein; periplasmic solute binding protein 2151620 10212996 Rahaq_1989 Rahnella sp. Y9602 periplasmic solute binding protein YP_004212731.1 2150604 D 741091 CDS YP_004212732.1 322832705 10212997 2151641..2152975 1 NC_015061.1 KEGG: spe:Spro_2772 hypothetical protein; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; Opacity-associated protein A domain protein; SMART: Peptidoglycan-binding LysM; peptidase M23 2152975 10212997 Rahaq_1990 Rahnella sp. Y9602 peptidase M23 YP_004212732.1 2151641 D 741091 CDS YP_004212733.1 322832706 10212998 2153081..2154061 1 NC_015061.1 KEGG: spe:Spro_2771 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; TIGRFAM: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; PFAM: lipid A biosynthesis acyltransferase; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2154061 10212998 Rahaq_1991 Rahnella sp. Y9602 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase YP_004212733.1 2153081 D 741091 CDS YP_004212734.1 322832707 10212999 complement(2154108..2155328) 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_0092 major facilitator transporter; major facilitator superfamily protein 2155328 10212999 Rahaq_1992 Rahnella sp. Y9602 major facilitator superfamily protein YP_004212734.1 2154108 R 741091 CDS YP_004212735.1 322832708 10213000 complement(2155427..2157811) 1 NC_015061.1 PFAM: IucA/IucC family protein; KEGG: ebi:EbC_25010 siderophore biosynthesis protein; IucA/IucC family protein 2157811 10213000 Rahaq_1993 Rahnella sp. Y9602 IucA/IucC family protein YP_004212735.1 2155427 R 741091 CDS YP_004212736.1 322832709 10213001 complement(2157826..2159136) 1 NC_015061.1 KEGG: ebi:EbC_25000 L-lysine 6-monooxygenase (NADPH); L-lysine 6-monooxygenase 2159136 10213001 Rahaq_1994 Rahnella sp. Y9602 L-lysine 6-monooxygenase YP_004212736.1 2157826 R 741091 CDS YP_004212737.1 322832710 10213002 complement(2159150..2160718) 1 NC_015061.1 PFAM: Pyridoxal-dependent decarboxylase; KEGG: pam:PANA_0635 Ddc; pyridoxal-dependent decarboxylase 2160718 10213002 Rahaq_1995 Rahnella sp. Y9602 pyridoxal-dependent decarboxylase YP_004212737.1 2159150 R 741091 CDS YP_004212738.1 322832711 10213003 complement(2161352..2162794) 1 NC_015061.1 TIGRFAM: pyruvate kinase; KEGG: spe:Spro_2770 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase 2162794 10213003 Rahaq_1996 Rahnella sp. Y9602 pyruvate kinase YP_004212738.1 2161352 R 741091 CDS YP_004212739.1 322832712 10213004 complement(2163029..2163898) 1 NC_015061.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: spe:Spro_2769 DNA-binding transcriptional regulator HexR; RpiR family transcriptional regulator 2163898 10213004 Rahaq_1997 Rahnella sp. Y9602 RpiR family transcriptional regulator YP_004212739.1 2163029 R 741091 CDS YP_004212740.1 322832713 10213005 2164306..2165781 1 NC_015061.1 TIGRFAM: glucose-6-phosphate 1-dehydrogenase; KEGG: yen:YE2383 glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase 2165781 10213005 Rahaq_1998 Rahnella sp. Y9602 glucose-6-phosphate 1-dehydrogenase YP_004212740.1 2164306 D 741091 CDS YP_004212741.1 322832714 10213006 2166047..2166688 1 NC_015061.1 KEGG: spe:Spro_4500 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase 2166688 10213006 Rahaq_1999 Rahnella sp. Y9602 2-dehydro-3-deoxyphosphogluconate aldolase YP_004212741.1 2166047 D 741091 CDS YP_004212742.1 322832715 10213007 complement(2166754..2167098) 1 NC_015061.1 PFAM: Endoribonuclease L-PSP; KEGG: pam:PANA_2138 YoaB; endoribonuclease L-PSP 2167098 10213007 Rahaq_2000 Rahnella sp. Y9602 endoribonuclease L-PSP YP_004212742.1 2166754 R 741091 CDS YP_004212743.1 322832716 10213008 2167241..2169154 1 NC_015061.1 SMART: helicase c2; DEAD-like helicase; KEGG: spe:Spro_2763 helicase C2; helicase c2 2169154 10213008 Rahaq_2001 Rahnella sp. Y9602 helicase c2 YP_004212743.1 2167241 D 741091 CDS YP_004212744.1 322832717 10213009 2169284..2169985 1 NC_015061.1 PFAM: peptidase M22 glycoprotease; KEGG: ypb:YPTS_2116 peptidase M22 glycoprotease; peptidase M22 glycoprotease 2169985 10213009 Rahaq_2002 Rahnella sp. Y9602 peptidase M22 glycoprotease YP_004212744.1 2169284 D 741091 CDS YP_004212745.1 322832718 10213010 2170048..2170680 1 NC_015061.1 KEGG: esa:ESA_01454 hypothetical protein; TIGRFAM: outer membrane lipoprotein, Slp family; PFAM: outer membrane lipoprotein Slp; outer membrane lipoprotein, Slp family 2170680 10213010 Rahaq_2003 Rahnella sp. Y9602 outer membrane lipoprotein, Slp family YP_004212745.1 2170048 D 741091 CDS YP_004212746.1 322832719 10213011 2170998..2172695 1 NC_015061.1 PFAM: AMP-dependent synthetase and ligase; KEGG: spe:Spro_2760 long-chain-fatty-acid--CoA ligase; AMP-dependent synthetase/ligase 2172695 10213011 Rahaq_2004 Rahnella sp. Y9602 AMP-dependent synthetase/ligase YP_004212746.1 2170998 D 741091 CDS YP_004212747.1 322832720 10213012 2172793..2173914 1 NC_015061.1 SMART: 3'-5' exonuclease; HRDC domain protein; TIGRFAM: ribonuclease D; KEGG: ypb:YPTS_2119 ribonuclease D; PFAM: 3'-5' exonuclease; HRDC domain protein; ribonuclease D 2173914 10213012 Rahaq_2005 Rahnella sp. Y9602 ribonuclease D YP_004212747.1 2172793 D 741091 CDS YP_004212748.1 322832721 10213013 complement(2174262..2174531) 1 NC_015061.1 KEGG: yen:YE2373 cell division topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; cell division topological specificity factor MinE 2174531 10213013 Rahaq_2006 Rahnella sp. Y9602 cell division topological specificity factor MinE YP_004212748.1 2174262 R 741091 CDS YP_004212749.1 322832722 10213014 complement(2174535..2175347) 1 NC_015061.1 TIGRFAM: septum site-determining protein MinD; KEGG: dze:Dd1591_1996 cell division inhibitor MinD; septum site-determining protein MinD 2175347 10213014 Rahaq_2007 Rahnella sp. Y9602 septum site-determining protein MinD YP_004212749.1 2174535 R 741091 CDS YP_004212750.1 322832723 10213015 complement(2175372..2176061) 1 NC_015061.1 KEGG: spe:Spro_2756 septum formation inhibitor; TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; septum site-determining protein MinC 2176061 10213015 Rahaq_2008 Rahnella sp. Y9602 septum site-determining protein MinC YP_004212750.1 2175372 R 741091 CDS YP_004212751.1 322832724 10213016 2176198..2176470 1 NC_015061.1 PFAM: protein of unknown function DUF709; KEGG: spe:Spro_2755 hypothetical protein; hypothetical protein 2176470 10213016 Rahaq_2009 Rahnella sp. Y9602 hypothetical protein YP_004212751.1 2176198 D 741091 CDS YP_004212752.1 322832725 10213017 2176593..2177768 1 NC_015061.1 TIGRFAM: lytic murein transglycosylase; KEGG: ypb:YPTS_2124 lytic murein transglycosylase; lytic murein transglycosylase 2177768 10213017 Rahaq_2010 Rahnella sp. Y9602 lytic murein transglycosylase YP_004212752.1 2176593 D 741091 CDS YP_004212753.1 322832726 10213018 2177795..2178451 1 NC_015061.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: ddd:Dda3937_02922 isomerase/hydrolase; fumarylacetoacetate (FAA) hydrolase 2178451 10213018 Rahaq_2011 Rahnella sp. Y9602 fumarylacetoacetate (FAA) hydrolase YP_004212753.1 2177795 D 741091 CDS YP_004212754.1 322832727 10213019 2178559..2179008 1 NC_015061.1 PFAM: protein of unknown function UPF0153; KEGG: spe:Spro_2751 hypothetical protein; hypothetical protein 2179008 10213019 Rahaq_2012 Rahnella sp. Y9602 hypothetical protein YP_004212754.1 2178559 D 741091 CDS YP_004212755.1 322832728 10213020 complement(2179083..2179424) 1 NC_015061.1 PFAM: Sigma-S stabilisation anti-adaptor protein; KEGG: ebi:EbC_11500 conserved uncharacterized protein; Sigma-S stabilization anti-adaptor protein 2179424 10213020 Rahaq_2013 Rahnella sp. Y9602 Sigma-S stabilization anti-adaptor protein YP_004212755.1 2179083 R 741091 CDS YP_004212756.1 322832729 10213021 complement(2179539..2180648) 1 NC_015061.1 PFAM: protein of unknown function UPF0118; KEGG: spe:Spro_2050 hypothetical protein; hypothetical protein 2180648 10213021 Rahaq_2014 Rahnella sp. Y9602 hypothetical protein YP_004212756.1 2179539 R 741091 CDS YP_004212757.1 322832730 10213022 complement(2180878..2181075) 1 NC_015061.1 KEGG: sco:SCO4415 integral membrane protein; hypothetical protein 2181075 10213022 Rahaq_2015 Rahnella sp. Y9602 hypothetical protein YP_004212757.1 2180878 R 741091 CDS YP_004212758.1 322832731 10213023 complement(2181377..2182381) 1 NC_015061.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ddd:Dda3937_00500 ISEch4 transposase; transposase IS116/IS110/IS902 family protein 2182381 10213023 Rahaq_2016 Rahnella sp. Y9602 transposase IS116/IS110/IS902 family protein YP_004212758.1 2181377 R 741091 CDS YP_004212759.1 322832732 10213024 complement(2182494..2183024) 1 NC_015061.1 PFAM: Disulphide bond formation protein DsbB; KEGG: ebi:EbC_24350 disulfide bond formation protein; disulfide bond formation protein DsbB 2183024 10213024 Rahaq_2017 Rahnella sp. Y9602 disulfide bond formation protein DsbB YP_004212759.1 2182494 R 741091 CDS YP_004212760.1 322832733 10213025 complement(2183206..2184783) 1 NC_015061.1 KEGG: spe:Spro_2749 sodium/proton antiporter; TIGRFAM: Na+/H+ antiporter NhaB; PFAM: Na+H+ antiporter NhaB; Na+/H+ antiporter NhaB 2184783 10213025 Rahaq_2018 Rahnella sp. Y9602 Na+/H+ antiporter NhaB YP_004212760.1 2183206 R 741091 CDS YP_004212761.1 322832734 10213026 2185028..2185750 1 NC_015061.1 TIGRFAM: fatty acid metabolism transcriptional regulator FadR; PFAM: fatty acid responsive transcription factor FadR domain protein; regulatory protein GntR HTH; KEGG: yen:YE2283 fatty acid metabolism regulator; SMART: regulatory protein GntR HTH; fatty acid metabolism transcriptional regulator FadR 2185750 10213026 Rahaq_2019 Rahnella sp. Y9602 fatty acid metabolism transcriptional regulator FadR YP_004212761.1 2185028 D 741091 CDS YP_004212762.1 322832735 10213027 complement(2185872..2187407) 1 NC_015061.1 PFAM: SpoVR family protein; KEGG: spe:Spro_2747 SpoVR family protein; SpoVR family protein 2187407 10213027 Rahaq_2020 Rahnella sp. Y9602 SpoVR family protein YP_004212762.1 2185872 R 741091 CDS YP_004212763.1 322832736 10213028 complement(2187662..2188492) 1 NC_015061.1 PFAM: alpha/beta hydrolase fold; KEGG: ebi:EbC_16970 conserved uncharacterized protein; alpha/beta hydrolase 2188492 10213028 Rahaq_2021 Rahnella sp. Y9602 alpha/beta hydrolase YP_004212763.1 2187662 R 741091 CDS YP_004212764.1 322832737 10213029 2188733..2188951 1 NC_015061.1 TIGRFAM: selenium-binding protein YdfZ; KEGG: ent:Ent638_1936 cytoplasmic protein; selenium-binding protein YdfZ 2188951 10213029 Rahaq_2022 Rahnella sp. Y9602 selenium-binding protein YdfZ YP_004212764.1 2188733 D 741091 CDS YP_004212765.1 322832738 10213030 2188995..2189183 1 NC_015061.1 hypothetical protein 2189183 10213030 Rahaq_2023 Rahnella sp. Y9602 hypothetical protein YP_004212765.1 2188995 D 741091 CDS YP_004212766.1 322832739 10213031 2189433..2190734 1 NC_015061.1 PFAM: FAD dependent oxidoreductase; KEGG: spe:Spro_2746 D-amino acid dehydrogenase small subunit; FAD dependent oxidoreductase 2190734 10213031 Rahaq_2024 Rahnella sp. Y9602 FAD dependent oxidoreductase YP_004212766.1 2189433 D 741091 CDS YP_004212767.1 322832740 10213032 2190807..2191880 1 NC_015061.1 TIGRFAM: alanine racemase; KEGG: spe:Spro_2745 alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 2191880 10213032 Rahaq_2025 Rahnella sp. Y9602 alanine racemase YP_004212767.1 2190807 D 741091 CDS YP_004212768.1 322832741 10213033 complement(2191889..2193094) 1 NC_015061.1 KEGG: spe:Spro_2744 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; Bcr/CflA subfamily drug resistance transporter 2193094 10213033 Rahaq_2026 Rahnella sp. Y9602 Bcr/CflA subfamily drug resistance transporter YP_004212768.1 2191889 R 741091 CDS YP_004212769.1 322832742 10213034 2193128..2193220 1 NC_015061.1 hypothetical protein 2193220 10213034 Rahaq_2027 Rahnella sp. Y9602 hypothetical protein YP_004212769.1 2193128 D 741091 CDS YP_004212770.1 322832743 10213035 complement(2193236..2194066) 1 NC_015061.1 TIGRFAM: NAD+ synthetase; KEGG: enc:ECL_02441 NAD synthetase; NAD+ synthetase 2194066 10213035 Rahaq_2028 Rahnella sp. Y9602 NAD+ synthetase YP_004212770.1 2193236 R 741091 CDS YP_004212771.1 322832744 10213036 2194534..2195298 1 NC_015061.1 PFAM: protein of unknown function DUF481; KEGG: spe:Spro_0878 hypothetical protein; hypothetical protein 2195298 10213036 Rahaq_2029 Rahnella sp. Y9602 hypothetical protein YP_004212771.1 2194534 D 741091 CDS YP_004212772.1 322832745 10213037 2195808..2197430 1 NC_015061.1 PFAM: Polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: spe:Spro_4403 polypeptide-transport-associated domain-containing protein; Polypeptide-transport-associated domain protein ShlB-type 2197430 10213037 Rahaq_2030 Rahnella sp. Y9602 Polypeptide-transport-associated domain protein ShlB-type YP_004212772.1 2195808 D 741091 CDS YP_004212773.1 322832746 10213038 2197467..2208737 1 NC_015061.1 KEGG: ctu:Ctu_1p01160 hypothetical protein; TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein; filamentous hemagglutinin family outer membrane protein 2208737 10213038 Rahaq_2031 Rahnella sp. Y9602 filamentous hemagglutinin family outer membrane protein YP_004212773.1 2197467 D 741091 CDS YP_004212774.1 322832747 10213039 2208737..2209171 1 NC_015061.1 KEGG: ara:Arad_3589 hypothetical protein; hypothetical protein 2209171 10213039 Rahaq_2032 Rahnella sp. Y9602 hypothetical protein YP_004212774.1 2208737 D 741091 CDS YP_004212775.1 322832748 10213040 complement(2209162..2209710) 1 NC_015061.1 PFAM: phosphotransferase KptA/Tpt1; KEGG: ddc:Dd586_3954 phosphotransferase KptA/Tpt1; phosphotransferase KptA/Tpt1 2209710 10213040 Rahaq_2033 Rahnella sp. Y9602 phosphotransferase KptA/Tpt1 YP_004212775.1 2209162 R 741091 CDS YP_004212776.1 322832749 10213041 2209958..2212579 1 NC_015061.1 PFAM: Haemagluttinin repeat-containing protein; KEGG: spe:Spro_4402 filamentous haemagglutinin outer membrane protein; hemagluttinin repeat-containing protein 2212579 10213041 Rahaq_2034 Rahnella sp. Y9602 hemagluttinin repeat-containing protein YP_004212776.1 2209958 D 741091 CDS YP_004212777.1 322832750 10213042 2212542..2213390 1 NC_015061.1 PFAM: protein of unknown function DUF638 hemagglutinin/hemolysin; KEGG: plu:plu1149 hypothetical protein; hypothetical protein 2213390 10213042 Rahaq_2035 Rahnella sp. Y9602 hypothetical protein YP_004212777.1 2212542 D 741091 CDS YP_004212778.1 322832751 10213043 2213835..2214242 1 NC_015061.1 KEGG: jan:Jann_3881 hypothetical protein; hypothetical protein 2214242 10213043 Rahaq_2036 Rahnella sp. Y9602 hypothetical protein YP_004212778.1 2213835 D 741091 CDS YP_004212779.1 322832752 10213045 2215965..2216213 1 NC_015061.1 KEGG: ent:Ent638_0055 hypothetical protein; hypothetical protein 2216213 10213045 Rahaq_2038 Rahnella sp. Y9602 hypothetical protein YP_004212779.1 2215965 D 741091 CDS YP_004212780.1 322832753 10213047 2217252..2217551 1 NC_015061.1 KEGG: psp:PSPPH_5064 hypothetical protein; hypothetical protein 2217551 10213047 Rahaq_2040 Rahnella sp. Y9602 hypothetical protein YP_004212780.1 2217252 D 741091 CDS YP_004212781.1 322832754 10213049 2218003..2218128 1 NC_015061.1 KEGG: rme:Rmet_4797 rhs-related transmembrane protein, YD repeat protein; rhs-related transmembrane protein, YD repeat protein 2218128 10213049 Rahaq_2042 Rahnella sp. Y9602 rhs-related transmembrane protein, YD repeat protein YP_004212781.1 2218003 D 741091 CDS YP_004212782.1 322832755 10213050 2218125..2218355 1 NC_015061.1 hypothetical protein 2218355 10213050 Rahaq_2043 Rahnella sp. Y9602 hypothetical protein YP_004212782.1 2218125 D 741091 CDS YP_004212783.1 322832756 10213051 complement(2219009..2220283) 1 NC_015061.1 PFAM: protein of unknown function DUF444; KEGG: ypb:YPTS_2141 hypothetical protein; hypothetical protein 2220283 10213051 Rahaq_2044 Rahnella sp. Y9602 hypothetical protein YP_004212783.1 2219009 R 741091 CDS YP_004212784.1 322832757 10213052 complement(2220318..2222252) 1 NC_015061.1 KEGG: ctu:Ctu_18000 uncharacterized protein YeaG; PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein; serine protein kinase PrkA 2222252 10213052 Rahaq_2045 Rahnella sp. Y9602 serine protein kinase PrkA YP_004212784.1 2220318 R 741091 CDS YP_004212785.1 322832758 10213053 2222858..2223607 1 NC_015061.1 PFAM: MltA-interacting MipA family protein; KEGG: yen:YE2271 hypothetical protein; MltA-interacting MipA family protein 2223607 10213053 Rahaq_2046 Rahnella sp. Y9602 MltA-interacting MipA family protein YP_004212785.1 2222858 D 741091 CDS YP_004212786.1 322832759 10213054 2223738..2224592 1 NC_015061.1 PFAM: aldo/keto reductase; KEGG: ddc:Dd586_2164 aldo/keto reductase; aldo/keto reductase 2224592 10213054 Rahaq_2047 Rahnella sp. Y9602 aldo/keto reductase YP_004212786.1 2223738 D 741091 CDS YP_004212787.1 322832760 10213055 complement(2224675..2225544) 1 NC_015061.1 PFAM: Aldose 1-epimerase; KEGG: spe:Spro_2729 aldose 1-epimerase; aldose 1-epimerase 2225544 10213055 Rahaq_2048 Rahnella sp. Y9602 aldose 1-epimerase YP_004212787.1 2224675 R 741091 CDS YP_004212788.1 322832761 10213056 complement(2225711..2226709) 1 NC_015061.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: yen:YE2265 glyceraldehyde 3-phosphate dehydrogenase A; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; glyceraldehyde-3-phosphate dehydrogenase, type I 2226709 10213056 Rahaq_2049 Rahnella sp. Y9602 glyceraldehyde-3-phosphate dehydrogenase, type I YP_004212788.1 2225711 R 741091 CDS YP_004212789.1 322832762 10213057 2227059..2227472 1 NC_015061.1 TIGRFAM: methionine-R-sulfoxide reductase; KEGG: spe:Spro_2727 methionine sulfoxide reductase B; PFAM: methionine sulfoxide reductase B; methionine-R-sulfoxide reductase 2227472 10213057 Rahaq_2050 Rahnella sp. Y9602 methionine-R-sulfoxide reductase YP_004212789.1 2227059 D 741091 CDS YP_004212790.1 322832763 10213058 2227568..2227840 1 NC_015061.1 PFAM: protein of unknown function DUF1315; KEGG: ypb:YPTS_2148 hypothetical protein; hypothetical protein 2227840 10213058 Rahaq_2051 Rahnella sp. Y9602 hypothetical protein YP_004212790.1 2227568 D 741091 CDS YP_004212791.1 322832764 10213059 complement(2227917..2228546) 1 NC_015061.1 KEGG: ddd:Dda3937_04576 nicotinamidase/pyrazinamidase; PFAM: isochorismatase hydrolase; nicotinamidase 2228546 10213059 Rahaq_2052 Rahnella sp. Y9602 nicotinamidase YP_004212791.1 2227917 R 741091 CDS YP_004212792.1 322832765 10213060 complement(2228560..2229573) 1 NC_015061.1 KEGG: enc:ECL_02465 cytoplasmic asparaginase I; TIGRFAM: L-asparaginase, type I; PFAM: Asparaginase/glutaminase; type I L-asparaginase 2229573 10213060 Rahaq_2053 Rahnella sp. Y9602 type I L-asparaginase YP_004212792.1 2228560 R 741091 CDS YP_004212793.1 322832766 10213061 complement(2229731..2231584) 1 NC_015061.1 KEGG: ypb:YPTS_2151 protease 4; TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; signal peptide peptidase SppA, 67K type 2231584 10213061 Rahaq_2054 Rahnella sp. Y9602 signal peptide peptidase SppA, 67K type YP_004212793.1 2229731 R 741091 CDS YP_004212794.1 322832767 10213062 2231764..2232315 1 NC_015061.1 PFAM: nitroreductase; KEGG: spe:Spro_2721 hypothetical protein; nitroreductase 2232315 10213062 Rahaq_2055 Rahnella sp. Y9602 nitroreductase YP_004212794.1 2231764 D 741091 CDS YP_004212795.1 322832768 10213063 2232539..2234488 1 NC_015061.1 TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; KEGG: spe:Spro_2718 DNA topoisomerase III; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; DNA topoisomerase III 2234488 10213063 Rahaq_2056 Rahnella sp. Y9602 DNA topoisomerase III YP_004212795.1 2232539 D 741091 CDS YP_004212796.1 322832769 10213064 2234481..2234795 1 NC_015061.1 PFAM: protein of unknown function DUF1496; KEGG: yen:YE2256 hypothetical protein; hypothetical protein 2234795 10213064 Rahaq_2057 Rahnella sp. Y9602 hypothetical protein YP_004212796.1 2234481 D 741091 CDS YP_004212797.1 322832770 10213065 complement(2234870..2235271) 1 NC_015061.1 PFAM: NUDIX hydrolase; KEGG: spe:Spro_2716 pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase; NUDIX hydrolase 2235271 10213065 Rahaq_2058 Rahnella sp. Y9602 NUDIX hydrolase YP_004212797.1 2234870 R 741091 CDS YP_004212798.1 322832771 10213066 complement(2235271..2236080) 1 NC_015061.1 KEGG: spe:Spro_2715 exonuclease III; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III 2236080 10213066 Rahaq_2059 Rahnella sp. Y9602 exodeoxyribonuclease III YP_004212798.1 2235271 R 741091 CDS YP_004212799.1 322832772 10213067 2236336..2237910 1 NC_015061.1 KEGG: spe:Spro_2617 DNA-binding transcriptional regulator TyrR; PFAM: sigma-54 factor interaction domain-containing protein; amino acid-binding ACT domain protein; SMART: AAA ATPase; PAS domain containing protein; TyrR family transcriptional regulator 2237910 10213067 Rahaq_2060 Rahnella sp. Y9602 TyrR family transcriptional regulator YP_004212799.1 2236336 D 741091 CDS YP_004212800.1 322832773 10213068 complement(2237988..2238491) 1 NC_015061.1 PFAM: Redoxin domain protein; KEGG: ypb:YPTS_2338 thiol peroxidase; redoxin domain-containing protein 2238491 10213068 Rahaq_2061 Rahnella sp. Y9602 redoxin domain-containing protein YP_004212800.1 2237988 R 741091 CDS YP_004212801.1 322832774 10213069 2238628..2239605 1 NC_015061.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: spe:Spro_2615 mandelate racemase/muconate lactonizing protein; mandelate racemase/muconate lactonizing protein 2239605 10213069 Rahaq_2062 Rahnella sp. Y9602 mandelate racemase/muconate lactonizing protein YP_004212801.1 2238628 D 741091 CDS YP_004212802.1 322832775 10213070 2239751..2241385 1 NC_015061.1 PFAM: extracellular solute-binding protein family 5; KEGG: spe:Spro_2611 extracellular solute-binding protein; family 5 extracellular solute-binding protein 2241385 10213070 Rahaq_2063 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004212802.1 2239751 D 741091 CDS YP_004212803.1 322832776 10213071 complement(2241450..2242652) 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE4032 hypothetical protein; major facilitator superfamily protein 2242652 10213071 Rahaq_2064 Rahnella sp. Y9602 major facilitator superfamily protein YP_004212803.1 2241450 R 741091 CDS YP_004212804.1 322832777 10213072 2242766..2243701 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: yen:YE4033 LysR family transcriptional regulator; LysR family transcriptional regulator 2243701 10213072 Rahaq_2065 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004212804.1 2242766 D 741091 CDS YP_004212805.1 322832778 10213073 2243781..2244764 1 NC_015061.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: yen:YE2107 zinc transporter; Mg2 transporter protein CorA family protein 2244764 10213073 Rahaq_2066 Rahnella sp. Y9602 Mg2 transporter protein CorA family protein YP_004212805.1 2243781 D 741091 CDS YP_004212806.1 322832779 10213074 2245048..2245725 1 NC_015061.1 KEGG: pam:PANA_1090 hypothetical protein; hypothetical protein 2245725 10213074 Rahaq_2067 Rahnella sp. Y9602 hypothetical protein YP_004212806.1 2245048 D 741091 CDS YP_004212807.1 322832780 10213075 complement(2245785..2246720) 1 NC_015061.1 PFAM: PP-loop domain protein; KEGG: pct:PC1_2316 C32 tRNA thiolase; PP-loop domain-containing protein 2246720 10213075 Rahaq_2068 Rahnella sp. Y9602 PP-loop domain-containing protein YP_004212807.1 2245785 R 741091 CDS YP_004212808.1 322832781 10213077 2247262..2247495 1 NC_015061.1 PFAM: protein of unknown function DUF903; KEGG: cko:CKO_03336 hypothetical protein; hypothetical protein 2247495 10213077 Rahaq_2070 Rahnella sp. Y9602 hypothetical protein YP_004212808.1 2247262 D 741091 CDS YP_004212809.1 322832782 10213078 2247528..2247770 1 NC_015061.1 PFAM: protein of unknown function DUF903; KEGG: pam:PANA_1770 YgdI; hypothetical protein 2247770 10213078 Rahaq_2071 Rahnella sp. Y9602 hypothetical protein YP_004212809.1 2247528 D 741091 CDS YP_004212810.1 322832783 10213079 complement(2247887..2249686) 1 NC_015061.1 PFAM: Na+/solute symporter; KEGG: msu:MS1741 PutP protein; Na+/solute symporter 2249686 10213079 Rahaq_2072 Rahnella sp. Y9602 Na+/solute symporter YP_004212810.1 2247887 R 741091 CDS YP_004212811.1 322832784 10213080 2249944..2251287 1 NC_015061.1 KEGG: pwa:Pecwa_0310 hypothetical protein; hypothetical protein 2251287 10213080 Rahaq_2073 Rahnella sp. Y9602 hypothetical protein YP_004212811.1 2249944 D 741091 CDS YP_004212812.1 322832785 10213081 2251284..2253422 1 NC_015061.1 PFAM: Heparinase II/III family protein; KEGG: vsp:VS_1247 hypothetical protein; heparinase II/III family protein 2253422 10213081 Rahaq_2074 Rahnella sp. Y9602 heparinase II/III family protein YP_004212812.1 2251284 D 741091 CDS YP_004212813.1 322832786 10213082 2253433..2254209 1 NC_015061.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: spe:Spro_0121 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2254209 10213082 Rahaq_2075 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004212813.1 2253433 D 741091 CDS YP_004212814.1 322832787 10213083 2254304..2255014 1 NC_015061.1 KEGG: vsp:VS_1251 transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 2255014 10213083 Rahaq_2076 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004212814.1 2254304 D 741091 CDS YP_004212815.1 322832788 10213084 2255267..2256133 1 NC_015061.1 KEGG: tau:Tola_1039 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 2256133 10213084 Rahaq_2077 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004212815.1 2255267 D 741091 CDS YP_004212816.1 322832789 10213085 2256242..2257540 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: cmi:CMM_0553 sugar MFS-permease; major facilitator superfamily protein 2257540 10213085 Rahaq_2078 Rahnella sp. Y9602 major facilitator superfamily protein YP_004212816.1 2256242 D 741091 CDS YP_004212817.1 322832790 10213086 2257588..2260245 1 NC_015061.1 PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: pjd:Pjdr2_2986 alpha-L-rhamnosidase; alpha-L-rhamnosidase 2260245 10213086 Rahaq_2079 Rahnella sp. Y9602 alpha-L-rhamnosidase YP_004212817.1 2257588 D 741091 CDS YP_004212818.1 322832791 10213087 complement(2260426..2263956) 1 NC_015061.1 KEGG: yen:YE2102 pyruvate-flavodoxin oxidoreductase; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; pyruvate ferredoxin/flavodoxin oxidoreductase 2263956 10213087 Rahaq_2080 Rahnella sp. Y9602 pyruvate ferredoxin/flavodoxin oxidoreductase YP_004212818.1 2260426 R 741091 CDS YP_004212819.1 322832792 10213088 2264471..2264752 1 NC_015061.1 PFAM: protein of unknown function DUF333; KEGG: pam:PANA_2012 YdbJ; hypothetical protein 2264752 10213088 Rahaq_2081 Rahnella sp. Y9602 hypothetical protein YP_004212819.1 2264471 D 741091 CDS YP_004212820.1 322832793 10213089 complement(2264803..2265225) 1 NC_015061.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: pay:PAU_02422 heat shock protein hslj; hypothetical protein 2265225 10213089 Rahaq_2082 Rahnella sp. Y9602 hypothetical protein YP_004212820.1 2264803 R 741091 CDS YP_004212821.1 322832794 10213090 2265428..2266531 1 NC_015061.1 KEGG: ebi:EbC_25770 sugar ABC transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter 2266531 10213090 Rahaq_2083 Rahnella sp. Y9602 ABC transporter YP_004212821.1 2265428 D 741091 CDS YP_004212822.1 322832795 10213091 2266597..2267877 1 NC_015061.1 PFAM: extracellular solute-binding protein family 1; KEGG: ebi:EbC_25760 sugar ABC transporter extracellular solute-binding protein; extracellular solute-binding protein 2267877 10213091 Rahaq_2084 Rahnella sp. Y9602 extracellular solute-binding protein YP_004212822.1 2266597 D 741091 CDS YP_004212823.1 322832796 10213092 2267894..2268805 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_25750 sugar ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 2268805 10213092 Rahaq_2085 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004212823.1 2267894 D 741091 CDS YP_004212824.1 322832797 10213093 2268802..2269617 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pam:PANA_4091 AraQ; binding-protein-dependent transport system inner membrane protein 2269617 10213093 Rahaq_2086 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004212824.1 2268802 D 741091 CDS YP_004212825.1 322832798 10213094 2269638..2270567 1 NC_015061.1 PFAM: metallophosphoesterase; KEGG: ebi:EbC_25730 metallophosphoesterase; metallophosphoesterase 2270567 10213094 Rahaq_2087 Rahnella sp. Y9602 metallophosphoesterase YP_004212825.1 2269638 D 741091 CDS YP_004212826.1 322832799 10213095 complement(2270644..2271630) 1 NC_015061.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: ypb:YPTS_2324 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 2271630 10213095 Rahaq_2088 Rahnella sp. Y9602 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_004212826.1 2270644 R 741091 CDS YP_004212827.1 322832800 10213096 2271873..2274599 1 NC_015061.1 KEGG: spe:Spro_2599 hypothetical protein; hypothetical protein 2274599 10213096 Rahaq_2089 Rahnella sp. Y9602 hypothetical protein YP_004212827.1 2271873 D 741091 CDS YP_004212828.1 322832801 10213097 2274596..2274790 1 NC_015061.1 KEGG: eay:EAM_1814 lipoprotein; lipoprotein 2274790 10213097 Rahaq_2090 Rahnella sp. Y9602 lipoprotein YP_004212828.1 2274596 D 741091 CDS YP_004212829.1 322832802 10213098 2274847..2275152 1 NC_015061.1 PFAM: Uncharacterised conserved protein UCP025560; KEGG: yen:YE2095 hypothetical protein; hypothetical protein 2275152 10213098 Rahaq_2091 Rahnella sp. Y9602 hypothetical protein YP_004212829.1 2274847 D 741091 CDS YP_004212830.1 322832803 10213099 complement(2275274..2275891) 1 NC_015061.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: esa:ESA_01692 azoreductase; NAD(P)H dehydrogenase (quinone) 2275891 10213099 Rahaq_2092 Rahnella sp. Y9602 NAD(P)H dehydrogenase (quinone) YP_004212830.1 2275274 R 741091 CDS YP_004212831.1 322832804 10213100 2276193..2280068 1 NC_015061.1 TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase-associated domain protein; helicase domain protein; protein of unknown function DUF1605; KEGG: spe:Spro_2595 ATP-dependent RNA helicase HrpA; SMART: DEAD-like helicase ; AAA ATPase; helicase domain protein; ATP-dependent helicase HrpA 2280068 10213100 Rahaq_2093 Rahnella sp. Y9602 ATP-dependent helicase HrpA YP_004212831.1 2276193 D 741091 CDS YP_004212832.1 322832805 10213101 complement(2280144..2281025) 1 NC_015061.1 KEGG: yen:YE2087 protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; peptidase S1 and S6 chymotrypsin/Hap 2281025 10213101 Rahaq_2094 Rahnella sp. Y9602 peptidase S1 and S6 chymotrypsin/Hap YP_004212832.1 2280144 R 741091 CDS YP_004212833.1 322832806 10213102 complement(2281364..2281792) 1 NC_015061.1 KEGG: ebi:EbC_19960 hypothetical protein; hypothetical protein 2281792 10213102 Rahaq_2095 Rahnella sp. Y9602 hypothetical protein YP_004212833.1 2281364 R 741091 CDS YP_004212834.1 322832807 10213103 complement(2282255..2283736) 1 NC_015061.1 KEGG: yen:YE2085 carboxypeptidase; PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; carboxypeptidase Taq 2283736 10213103 Rahaq_2096 Rahnella sp. Y9602 carboxypeptidase Taq YP_004212834.1 2282255 R 741091 CDS YP_004212835.1 322832808 10213104 complement(2283720..2285063) 1 NC_015061.1 KEGG: spe:Spro_2591 sensor protein RstB; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase 2285063 10213104 Rahaq_2097 Rahnella sp. Y9602 integral membrane sensor signal transduction histidine kinase YP_004212835.1 2283720 R 741091 CDS YP_004212836.1 322832809 10213105 complement(2285060..2285791) 1 NC_015061.1 KEGG: spe:Spro_2590 DNA-binding transcriptional regulator RstA; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator 2285791 10213105 Rahaq_2098 Rahnella sp. Y9602 transcriptional regulator YP_004212836.1 2285060 R 741091 CDS YP_004212837.1 322832810 10213106 2286009..2286428 1 NC_015061.1 KEGG: spe:Spro_2588 hypothetical protein; hypothetical protein 2286428 10213106 Rahaq_2099 Rahnella sp. Y9602 hypothetical protein YP_004212837.1 2286009 D 741091 CDS YP_004212838.1 322832811 10213107 complement(2286495..2287730) 1 NC_015061.1 KEGG: ebi:EbC_28870 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I; gluconate 2-dehydrogenase (acceptor) 2287730 10213107 Rahaq_2100 Rahnella sp. Y9602 gluconate 2-dehydrogenase (acceptor) YP_004212838.1 2286495 R 741091 CDS YP_004212839.1 322832812 10213108 complement(2287727..2289490) 1 NC_015061.1 KEGG: ebi:EbC_28860 gluconate 2-dehydrogenase (acceptor); PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; gluconate 2-dehydrogenase (acceptor) 2289490 10213108 Rahaq_2101 Rahnella sp. Y9602 gluconate 2-dehydrogenase (acceptor) YP_004212839.1 2287727 R 741091 CDS YP_004212840.1 322832813 10213109 complement(2289506..2290255) 1 NC_015061.1 KEGG: ebi:EbC_28850 gluconate 2-dehydrogenase (acceptor); gluconate 2-dehydrogenase (acceptor) 2290255 10213109 Rahaq_2102 Rahnella sp. Y9602 gluconate 2-dehydrogenase (acceptor) YP_004212840.1 2289506 R 741091 CDS YP_004212841.1 322832814 10213110 2290603..2292111 1 NC_015061.1 KEGG: spe:Spro_2901 hypothetical protein; hypothetical protein 2292111 10213110 Rahaq_2103 Rahnella sp. Y9602 hypothetical protein YP_004212841.1 2290603 D 741091 CDS YP_004212842.1 322832815 10213111 complement(2292194..2292844) 1 NC_015061.1 KEGG: spe:Spro_2900 transcriptional regulator NarL; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; LuxR family transcriptional regulator 2292844 10213111 Rahaq_2104 Rahnella sp. Y9602 LuxR family transcriptional regulator YP_004212842.1 2292194 R 741091 CDS YP_004212843.1 322832816 10213112 complement(2292841..2294631) 1 NC_015061.1 KEGG: pct:PC1_2261 nitrate/nitrite sensor protein NarX; PFAM: histidine kinase dimerisation and phosphoacceptor region; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase 2294631 10213112 Rahaq_2105 Rahnella sp. Y9602 integral membrane sensor signal transduction histidine kinase YP_004212843.1 2292841 R 741091 CDS YP_004212844.1 322832817 10213113 2294995..2296413 1 NC_015061.1 KEGG: spe:Spro_2898 nitrite transporter; TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; nitrite transporter 2296413 10213113 Rahaq_2106 Rahnella sp. Y9602 nitrite transporter YP_004212844.1 2294995 D 741091 CDS YP_004212845.1 322832818 10213114 2296538..2297860 1 NC_015061.1 PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein; transposase IS4 family protein 2297860 10213114 Rahaq_2107 Rahnella sp. Y9602 transposase IS4 family protein YP_004212845.1 2296538 D 741091 CDS YP_004212846.1 322832819 10213115 complement(2297916..2298188) 1 NC_015061.1 PFAM: protein of unknown function DUF156; KEGG: cro:ROD_29021 hypothetical protein; hypothetical protein 2298188 10213115 Rahaq_2108 Rahnella sp. Y9602 hypothetical protein YP_004212846.1 2297916 R 741091 CDS YP_004212847.1 322832820 10213116 2298309..2299184 1 NC_015061.1 PFAM: high-affinity nickel-transporter; KEGG: sew:SeSA_A3193 nickel/cobalt efflux protein RcnA; high-affinity nickel-transporter 2299184 10213116 Rahaq_2109 Rahnella sp. Y9602 high-affinity nickel-transporter YP_004212847.1 2298309 D 741091 CDS YP_004212848.1 322832821 10213117 2299290..2300270 1 NC_015061.1 KEGG: pam:PANA_1566 Bah; alpha/beta hydrolase 2300270 10213117 Rahaq_2110 Rahnella sp. Y9602 alpha/beta hydrolase YP_004212848.1 2299290 D 741091 CDS YP_004212849.1 322832822 10213118 2300319..2301248 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: yen:YE2132 LysR family transcriptional regulator; LysR family transcriptional regulator 2301248 10213118 Rahaq_2111 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004212849.1 2300319 D 741091 CDS YP_004212850.1 322832823 10213119 2301338..2301835 1 NC_015061.1 PFAM: Protein of unknown function DUF2501; KEGG: spe:Spro_0994 hypothetical protein; hypothetical protein 2301835 10213119 Rahaq_2112 Rahnella sp. Y9602 hypothetical protein YP_004212850.1 2301338 D 741091 CDS YP_004212851.1 322832824 10213120 complement(2302457..2303095) 1 NC_015061.1 SMART: HhH-GPD family protein; iron-sulfur cluster loop; TIGRFAM: endonuclease III; KEGG: ypb:YPTS_2230 endonuclease III; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; endonuclease III 2303095 10213120 Rahaq_2113 Rahnella sp. Y9602 endonuclease III YP_004212851.1 2302457 R 741091 CDS YP_004212852.1 322832825 10213121 complement(2303088..2303786) 1 NC_015061.1 KEGG: yen:YE1988 electron transport complex RsxE subunit; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; PFAM: RnfA-Nqr electron transport subunit; RnfABCDGE type electron transport complex subunit E 2303786 10213121 Rahaq_2114 Rahnella sp. Y9602 RnfABCDGE type electron transport complex subunit E YP_004212852.1 2303088 R 741091 CDS YP_004212853.1 322832826 10213122 complement(2303779..2304411) 1 NC_015061.1 KEGG: ypb:YPTS_2232 electron transport complex protein RnfG; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; RnfABCDGE type electron transport complex subunit G 2304411 10213122 Rahaq_2115 Rahnella sp. Y9602 RnfABCDGE type electron transport complex subunit G YP_004212853.1 2303779 R 741091 CDS YP_004212854.1 322832827 10213123 complement(2304421..2305473) 1 NC_015061.1 KEGG: spe:Spro_2237 electron transport complex protein RnfD; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; RnfABCDGE type electron transport complex subunit D 2305473 10213123 Rahaq_2116 Rahnella sp. Y9602 RnfABCDGE type electron transport complex subunit D YP_004212854.1 2304421 R 741091 CDS YP_004212855.1 322832828 10213124 complement(2305474..2307591) 1 NC_015061.1 KEGG: spe:Spro_2239 electron transport complex, RnfABCDGE type, C subunit; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; RnfABCDGE type electron transport complex subunit C 2307591 10213124 Rahaq_2117 Rahnella sp. Y9602 RnfABCDGE type electron transport complex subunit C YP_004212855.1 2305474 R 741091 CDS YP_004212856.1 322832829 10213125 complement(2307581..2308147) 1 NC_015061.1 KEGG: spe:Spro_2240 electron transport complex protein RnfB; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: Fe-S cluster domain protein; RnfABCDGE type electron transport complex subunit B 2308147 10213125 Rahaq_2118 Rahnella sp. Y9602 RnfABCDGE type electron transport complex subunit B YP_004212856.1 2307581 R 741091 CDS YP_004212857.1 322832830 10213126 complement(2308147..2308728) 1 NC_015061.1 KEGG: yen:YE1994 Na(+)-translocating NADH-quinone reductase subunit E; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; RnfABCDGE type electron transport complex subunit A 2308728 10213126 Rahaq_2119 Rahnella sp. Y9602 RnfABCDGE type electron transport complex subunit A YP_004212857.1 2308147 R 741091 CDS YP_004212858.1 322832831 10213127 complement(2308769..2309209) 1 NC_015061.1 PFAM: Protein of unknown function DUF2569; KEGG: yen:YE1996 hypothetical protein; hypothetical protein 2309209 10213127 Rahaq_2120 Rahnella sp. Y9602 hypothetical protein YP_004212858.1 2308769 R 741091 CDS YP_004212859.1 322832832 10213128 complement(2309369..2310736) 1 NC_015061.1 KEGG: yen:YE2780 C4-dicarboxylate transporter DcuC; TIGRFAM: anaerobic c4-dicarboxylate antiporter, DcuC family; PFAM: C4-dicarboxylate anaerobic carrier-like; anaerobic C4-dicarboxylate transporter 2310736 10213128 Rahaq_2121 Rahnella sp. Y9602 anaerobic C4-dicarboxylate transporter YP_004212859.1 2309369 R 741091 CDS YP_004212860.1 322832833 10213129 complement(2311053..2312261) 1 NC_015061.1 PFAM: monooxygenase FAD-binding; KEGG: spe:Spro_1429 hypothetical protein; monooxygenase FAD-binding protein 2312261 10213129 Rahaq_2122 Rahnella sp. Y9602 monooxygenase FAD-binding protein YP_004212860.1 2311053 R 741091 CDS YP_004212861.1 322832834 10213130 2312569..2313282 1 NC_015061.1 KEGG: ebi:EbC_06810 transcription regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 2313282 10213130 Rahaq_2123 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004212861.1 2312569 D 741091 CDS YP_004212862.1 322832835 10213131 2313269..2314447 1 NC_015061.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: ebi:EbC_06820 cystathionine gamma-synthase protein; Cys/Met metabolism pyridoxal-phosphate-dependent protein 2314447 10213131 Rahaq_2124 Rahnella sp. Y9602 Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_004212862.1 2313269 D 741091 CDS YP_004212863.1 322832836 10213132 2314508..2315788 1 NC_015061.1 PFAM: extracellular solute-binding protein family 1; KEGG: ebi:EbC_06830 extracellular solute-binding protein, family 1; extracellular solute-binding protein 2315788 10213132 Rahaq_2125 Rahnella sp. Y9602 extracellular solute-binding protein YP_004212863.1 2314508 D 741091 CDS YP_004212864.1 322832837 10213133 2315852..2316775 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_06840 ABC-type sugar transport systems, permease component; binding-protein-dependent transport system inner membrane protein 2316775 10213133 Rahaq_2126 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004212864.1 2315852 D 741091 CDS YP_004212865.1 322832838 10213134 2316786..2317628 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_06850 ABC-type sugar transport system, permease component; binding-protein-dependent transport system inner membrane protein 2317628 10213134 Rahaq_2127 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004212865.1 2316786 D 741091 CDS YP_004212866.1 322832839 10213135 2317633..2318727 1 NC_015061.1 KEGG: ebi:EbC_06860 ABC-type sugar transport systems, ATPase component; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter 2318727 10213135 Rahaq_2128 Rahnella sp. Y9602 ABC transporter YP_004212866.1 2317633 D 741091 CDS YP_004212867.1 322832840 10213136 complement(2318774..2320066) 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2281 major facilitator transporter; major facilitator superfamily protein 2320066 10213136 Rahaq_2129 Rahnella sp. Y9602 major facilitator superfamily protein YP_004212867.1 2318774 R 741091 CDS YP_004212868.1 322832841 10213137 2320207..2321106 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: yen:YE2022 LysR family transcriptional regulator; LysR family transcriptional regulator 2321106 10213137 Rahaq_2130 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004212868.1 2320207 D 741091 CDS YP_004212869.1 322832842 10213138 2321274..2322497 1 NC_015061.1 PFAM: ROK family protein; KEGG: spe:Spro_2283 ROK family protein; ROK family protein 2322497 10213138 Rahaq_2131 Rahnella sp. Y9602 ROK family protein YP_004212869.1 2321274 D 741091 CDS YP_004212870.1 322832843 10213139 2322821..2323507 1 NC_015061.1 TIGRFAM: dethiobiotin synthase; KEGG: spe:Spro_2284 dethiobiotin synthase; dethiobiotin synthase 2323507 10213139 Rahaq_2132 Rahnella sp. Y9602 dethiobiotin synthase YP_004212870.1 2322821 D 741091 CDS YP_004212871.1 322832844 10213140 complement(2323652..2323957) 1 NC_015061.1 KEGG: cci:CC1G_14977 hypothetical protein; hypothetical protein 2323957 10213140 Rahaq_2133 Rahnella sp. Y9602 hypothetical protein YP_004212871.1 2323652 R 741091 CDS YP_004212872.1 322832845 10213141 2324220..2325713 1 NC_015061.1 KEGG: spe:Spro_2286 EmrB/QacA family drug resistance transporter; manually curated; PFAM: major facilitator superfamily MFS_1; major facilitator superfamily protein 2325713 10213141 Rahaq_2134 Rahnella sp. Y9602 major facilitator superfamily protein YP_004212872.1 2324220 D 741091 CDS YP_004212873.1 322832846 10213142 complement(2325710..2327368) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA1345 ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 2327368 10213142 Rahaq_2135 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004212873.1 2325710 R 741091 CDS YP_004212874.1 322832847 10213143 complement(2327418..2328419) 1 NC_015061.1 PFAM: extracellular solute-binding protein family 1; KEGG: pct:PC1_1221 extracellular solute-binding protein family 1; extracellular solute-binding protein 2328419 10213143 Rahaq_2136 Rahnella sp. Y9602 extracellular solute-binding protein YP_004212874.1 2327418 R 741091 CDS YP_004212875.1 322832848 10213144 complement(2328437..2329186) 1 NC_015061.1 KEGG: pct:PC1_1222 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2329186 10213144 Rahaq_2137 Rahnella sp. Y9602 ABC transporter YP_004212875.1 2328437 R 741091 CDS YP_004212876.1 322832849 10213145 complement(2329924..2331429) 1 NC_015061.1 KEGG: ypb:YPTS_2242 L-arabinose isomerase; PFAM: L-arabinose isomerase; L-arabinose isomerase 2331429 10213145 Rahaq_2138 Rahnella sp. Y9602 L-arabinose isomerase YP_004212876.1 2329924 R 741091 CDS YP_004212877.1 322832850 10213146 complement(2331466..2333145) 1 NC_015061.1 KEGG: ypb:YPTS_2243 ribulokinase; TIGRFAM: L-ribulokinase; PFAM: Carbohydrate kinase, FGGY-like; L-ribulokinase 2333145 10213146 Rahaq_2139 Rahnella sp. Y9602 L-ribulokinase YP_004212877.1 2331466 R 741091 CDS YP_004212878.1 322832851 10213147 2333562..2334548 1 NC_015061.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: eca:ECA2273 L-arabinose-binding periplasmic protein; LacI family transcriptional regulator 2334548 10213147 Rahaq_2140 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004212878.1 2333562 D 741091 CDS YP_004212879.1 322832852 10213148 complement(2334552..2334773) 1 NC_015061.1 KEGG: eca:ECA3326 hypothetical protein; hypothetical protein 2334773 10213148 Rahaq_2141 Rahnella sp. Y9602 hypothetical protein YP_004212879.1 2334552 R 741091 CDS YP_004212880.1 322832853 10213149 2334800..2336386 1 NC_015061.1 KEGG: pct:PC1_2030 L-arabinose transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2336386 10213149 Rahaq_2142 Rahnella sp. Y9602 ABC transporter YP_004212880.1 2334800 D 741091 CDS YP_004212881.1 322832854 10213150 2336405..2337409 1 NC_015061.1 PFAM: inner-membrane translocator; KEGG: ent:Ent638_2474 L-arabinose transporter permease protein; inner-membrane translocator 2337409 10213150 Rahaq_2143 Rahnella sp. Y9602 inner-membrane translocator YP_004212881.1 2336405 D 741091 CDS YP_004212882.1 322832855 10213151 2337586..2338521 1 NC_015061.1 KEGG: spe:Spro_2248 DNA-binding transcriptional regulator AraC; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 2338521 10213151 Rahaq_2144 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004212882.1 2337586 D 741091 CDS YP_004212883.1 322832856 10213152 complement(2338707..2339891) 1 NC_015061.1 TIGRFAM: mannonate dehydratase; KEGG: ddd:Dda3937_02522 mannonate dehydratase; PFAM: Mannonate dehydratase; mannonate dehydratase 2339891 10213152 Rahaq_2145 Rahnella sp. Y9602 mannonate dehydratase YP_004212883.1 2338707 R 741091 CDS YP_004212884.1 322832857 10213153 2340089..2340787 1 NC_015061.1 KEGG: dze:Dd1591_4111 regulatory protein GntR HTH; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 2340787 10213153 Rahaq_2146 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004212884.1 2340089 D 741091 CDS YP_004212885.1 322832858 10213154 complement(2340962..2342608) 1 NC_015061.1 TIGRFAM: cellulose synthase operon protein YhjU; KEGG: yen:YE4078 hypothetical protein; cellulose synthase operon protein YhjU 2342608 10213154 Rahaq_2147 Rahnella sp. Y9602 cellulose synthase operon protein YhjU YP_004212885.1 2340962 R 741091 CDS YP_004212886.1 322832859 10213155 complement(2342605..2342838) 1 NC_015061.1 TIGRFAM: celllulose biosynthesis operon protein BcsF/YhjT; KEGG: eca:ECA4365 hypothetical protein; celllulose biosynthesis operon protein BcsF/YhjT 2342838 10213155 Rahaq_2148 Rahnella sp. Y9602 celllulose biosynthesis operon protein BcsF/YhjT YP_004212886.1 2342605 R 741091 CDS YP_004212887.1 322832860 10213156 complement(2342844..2344442) 1 NC_015061.1 TIGRFAM: cellulose biosynthesis protein BcsE; KEGG: spe:Spro_0145 hypothetical protein; cellulose biosynthesis protein BcsE 2344442 10213156 Rahaq_2149 Rahnella sp. Y9602 cellulose biosynthesis protein BcsE YP_004212887.1 2342844 R 741091 CDS YP_004212888.1 322832861 10213157 2344645..2344845 1 NC_015061.1 KEGG: spe:Spro_0146 hypothetical protein; hypothetical protein 2344845 10213157 Rahaq_2150 Rahnella sp. Y9602 hypothetical protein YP_004212888.1 2344645 D 741091 CDS YP_004212889.1 322832862 10213158 2344847..2345590 1 NC_015061.1 KEGG: yen:YE4075 hypothetical protein; TIGRFAM: cellulose synthase operon protein YhjQ; PFAM: Cellulose synthase operon protein YhjQ; cellulose synthase operon protein YhjQ 2345590 10213158 Rahaq_2151 Rahnella sp. Y9602 cellulose synthase operon protein YhjQ YP_004212889.1 2344847 D 741091 CDS YP_004212890.1 322832863 10213159 2345587..2348202 1 NC_015061.1 KEGG: spe:Spro_0148 cellulose synthase catalytic subunit; TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ; cellulose synthase catalytic subunit 2348202 10213159 Rahaq_2152 Rahnella sp. Y9602 cellulose synthase catalytic subunit YP_004212890.1 2345587 D 741091 CDS YP_004212891.1 322832864 10213160 2348199..2350538 1 NC_015061.1 PFAM: Cellulose synthase BcsB; KEGG: spe:Spro_0149 cellulose synthase regulator protein; Cellulose synthase BcsB 2350538 10213160 Rahaq_2153 Rahnella sp. Y9602 Cellulose synthase BcsB YP_004212891.1 2348199 D 741091 CDS YP_004212892.1 322832865 10213161 2350543..2353833 1 NC_015061.1 PFAM: cellulose synthase operon C domain protein; Tetratricopeptide TPR_1 repeat-containing protein; KEGG: spe:Spro_0151 cellulose synthase subunit BcsC; cellulose synthase operon C domain-containing protein 2353833 10213161 Rahaq_2154 Rahnella sp. Y9602 cellulose synthase operon C domain-containing protein YP_004212892.1 2350543 D 741091 CDS YP_004212893.1 322832866 10213162 complement(2354457..2355293) 1 NC_015061.1 KEGG: spe:Spro_2076 N-formylglutamate amidohydrolase; TIGRFAM: N-formylglutamate amidohydrolase; PFAM: N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase 2355293 10213162 Rahaq_2155 Rahnella sp. Y9602 N-formylglutamate amidohydrolase YP_004212893.1 2354457 R 741091 CDS YP_004212894.1 322832867 10213163 complement(2355290..2356552) 1 NC_015061.1 TIGRFAM: imidazolonepropionase; KEGG: spe:Spro_2077 imidazolonepropionase; PFAM: amidohydrolase; imidazolonepropionase 2356552 10213163 Rahaq_2156 Rahnella sp. Y9602 imidazolonepropionase YP_004212894.1 2355290 R 741091 CDS YP_004212895.1 322832868 10213164 complement(2356723..2357541) 1 NC_015061.1 TIGRFAM: histidine utilization repressor; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; KEGG: dze:Dd1591_1261 transcriptional regulator, histidine utilization repressor, GntR family; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 2357541 10213164 Rahaq_2157 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004212895.1 2356723 R 741091 CDS YP_004212896.1 322832869 10213165 2357791..2359164 1 NC_015061.1 KEGG: spe:Spro_2079 N-formimino-L-glutamate deiminase; TIGRFAM: formiminoglutamate deiminase; PFAM: amidohydrolase; formiminoglutamate deiminase 2359164 10213165 Rahaq_2158 Rahnella sp. Y9602 formiminoglutamate deiminase YP_004212896.1 2357791 D 741091 CDS YP_004212897.1 322832870 10213166 2359161..2359742 1 NC_015061.1 PFAM: protein of unknown function DUF886; KEGG: spe:Spro_2080 hypothetical protein; hypothetical protein 2359742 10213166 Rahaq_2159 Rahnella sp. Y9602 hypothetical protein YP_004212897.1 2359161 D 741091 CDS YP_004212898.1 322832871 10213167 2359990..2360970 1 NC_015061.1 SMART: extracellular solute-binding protein family 3; KEGG: reu:Reut_A2720 extracellular solute-binding protein; family 3 extracellular solute-binding protein 2360970 10213167 Rahaq_2160 Rahnella sp. Y9602 family 3 extracellular solute-binding protein YP_004212898.1 2359990 D 741091 CDS YP_004212899.1 322832872 10213168 2360988..2361869 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddc:Dd586_2947 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2361869 10213168 Rahaq_2161 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004212899.1 2360988 D 741091 CDS YP_004212900.1 322832873 10213169 2361869..2362654 1 NC_015061.1 KEGG: ddd:Dda3937_01662 UreA carboxylase-related ABC transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2362654 10213169 Rahaq_2162 Rahnella sp. Y9602 ABC transporter YP_004212900.1 2361869 D 741091 CDS YP_004212901.1 322832874 10213170 2362778..2364328 1 NC_015061.1 TIGRFAM: histidine ammonia-lyase; KEGG: ebi:EbC_14140 histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; histidine ammonia-lyase 2364328 10213170 Rahaq_2163 Rahnella sp. Y9602 histidine ammonia-lyase YP_004212901.1 2362778 D 741091 CDS YP_004212902.1 322832875 10213171 2364386..2366074 1 NC_015061.1 TIGRFAM: urocanate hydratase; KEGG: dda:Dd703_2641 urocanate hydratase; PFAM: Urocanase; urocanate hydratase 2366074 10213171 Rahaq_2164 Rahnella sp. Y9602 urocanate hydratase YP_004212902.1 2364386 D 741091 CDS YP_004212903.1 322832876 10213172 2366249..2367415 1 NC_015061.1 KEGG: dac:Daci_0154 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; histidinol-phosphate aminotransferase 2367415 10213172 Rahaq_2165 Rahnella sp. Y9602 histidinol-phosphate aminotransferase YP_004212903.1 2366249 D 741091 CDS YP_004212904.1 322832877 10213173 2367412..2368563 1 NC_015061.1 KEGG: tmz:Tmz1t_0668 (S)-mandelate dehydrogenase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; (S)-mandelate dehydrogenase 2368563 10213173 Rahaq_2166 Rahnella sp. Y9602 (S)-mandelate dehydrogenase YP_004212904.1 2367412 D 741091 CDS YP_004212905.1 322832878 10213174 2368640..2369725 1 NC_015061.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: ebi:EbC_14070 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 2369725 10213174 Rahaq_2167 Rahnella sp. Y9602 iron-containing alcohol dehydrogenase YP_004212905.1 2368640 D 741091 CDS YP_004212906.1 322832879 10213175 complement(2369968..2370738) 1 NC_015061.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: oan:Oant_3576 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2370738 10213175 Rahaq_2168 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004212906.1 2369968 R 741091 CDS YP_004212907.1 322832880 10213176 complement(2370738..2372060) 1 NC_015061.1 KEGG: smd:Smed_6307 hypothetical protein; hypothetical protein 2372060 10213176 Rahaq_2169 Rahnella sp. Y9602 hypothetical protein YP_004212907.1 2370738 R 741091 CDS YP_004212908.1 322832881 10213177 complement(2372063..2373403) 1 NC_015061.1 TIGRFAM: histidinol dehydrogenase; KEGG: oan:Oant_3581 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; histidinol dehydrogenase 2373403 10213177 Rahaq_2170 Rahnella sp. Y9602 histidinol dehydrogenase YP_004212908.1 2372063 R 741091 CDS YP_004212909.1 322832882 10213178 complement(2373420..2374190) 1 NC_015061.1 KEGG: mlo:mlr7115 ABC-transport protein, ATP-binding component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2374190 10213178 Rahaq_2171 Rahnella sp. Y9602 ABC transporter YP_004212909.1 2373420 R 741091 CDS YP_004212910.1 322832883 10213179 complement(2374190..2374999) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr7114 ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 2374999 10213179 Rahaq_2172 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004212910.1 2374190 R 741091 CDS YP_004212911.1 322832884 10213180 complement(2374996..2376003) 1 NC_015061.1 KEGG: mlo:mlr7112 hypothetical protein; hypothetical protein 2376003 10213180 Rahaq_2173 Rahnella sp. Y9602 hypothetical protein YP_004212911.1 2374996 R 741091 CDS YP_004212912.1 322832885 10213181 complement(2376278..2377258) 1 NC_015061.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dda:Dd703_3519 transcriptional regulator, LysR family; LysR family transcriptional regulator 2377258 10213181 Rahaq_2174 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004212912.1 2376278 R 741091 CDS YP_004212913.1 322832886 10213182 2377448..2378875 1 NC_015061.1 KEGG: dda:Dd703_3518 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; argininosuccinate lyase 2378875 10213182 Rahaq_2175 Rahnella sp. Y9602 argininosuccinate lyase YP_004212913.1 2377448 D 741091 CDS YP_004212914.1 322832887 10213183 2378894..2379766 1 NC_015061.1 KEGG: dda:Dd703_3517 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 2379766 10213183 Rahaq_2176 Rahnella sp. Y9602 polar amino acid ABC transporter inner membrane subunit YP_004212914.1 2378894 D 741091 CDS YP_004212915.1 322832888 10213184 2379780..2380544 1 NC_015061.1 KEGG: dda:Dd703_3516 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2380544 10213184 Rahaq_2177 Rahnella sp. Y9602 ABC transporter YP_004212915.1 2379780 D 741091 CDS YP_004212916.1 322832889 10213185 2380583..2381404 1 NC_015061.1 KEGG: dda:Dd703_3515 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 2381404 10213185 Rahaq_2178 Rahnella sp. Y9602 family 3 extracellular solute-binding protein YP_004212916.1 2380583 D 741091 CDS YP_004212917.1 322832890 10213186 2381426..2382280 1 NC_015061.1 PFAM: polysaccharide deacetylase; KEGG: dda:Dd703_3514 polysaccharide deacetylase; polysaccharide deacetylase 2382280 10213186 Rahaq_2179 Rahnella sp. Y9602 polysaccharide deacetylase YP_004212917.1 2381426 D 741091 CDS YP_004212918.1 322832891 10213187 2382273..2383175 1 NC_015061.1 PFAM: polysaccharide deacetylase; KEGG: ebi:EbC_14040 polysaccharide deacetylase; polysaccharide deacetylase 2383175 10213187 Rahaq_2180 Rahnella sp. Y9602 polysaccharide deacetylase YP_004212918.1 2382273 D 741091 CDS YP_004212919.1 322832892 10213188 2383168..2384523 1 NC_015061.1 PFAM: MmgE/PrpD family protein; KEGG: pfo:Pfl01_2858 MmgE/PrpD; MmgE/PrpD family protein 2384523 10213188 Rahaq_2181 Rahnella sp. Y9602 MmgE/PrpD family protein YP_004212919.1 2383168 D 741091 CDS YP_004212920.1 322832893 10213189 2384653..2385699 1 NC_015061.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: spe:Spro_2249 oxidoreductase; oxidoreductase domain-containing protein 2385699 10213189 Rahaq_2182 Rahnella sp. Y9602 oxidoreductase domain-containing protein YP_004212920.1 2384653 D 741091 CDS YP_004212921.1 322832894 10213190 2385779..2386798 1 NC_015061.1 KEGG: yen:YE2008 hypothetical protein; hypothetical protein 2386798 10213190 Rahaq_2183 Rahnella sp. Y9602 hypothetical protein YP_004212921.1 2385779 D 741091 CDS YP_004212922.1 322832895 10213191 complement(2386863..2387861) 1 NC_015061.1 TIGRFAM: adenosine deaminase; KEGG: yen:YE2009 adenosine deaminase; PFAM: adenosine/AMP deaminase; adenosine deaminase 2387861 10213191 Rahaq_2184 Rahnella sp. Y9602 adenosine deaminase YP_004212922.1 2386863 R 741091 CDS YP_004212923.1 322832896 10213192 complement(2388069..2389244) 1 NC_015061.1 PFAM: aminotransferase class I and II; KEGG: spe:Spro_2262 aminotransferase class I and II; class I and II aminotransferase 2389244 10213192 Rahaq_2185 Rahnella sp. Y9602 class I and II aminotransferase YP_004212923.1 2388069 R 741091 CDS YP_004212924.1 322832897 10213193 complement(2389304..2390917) 1 NC_015061.1 TIGRFAM: PTS system, maltose and glucose-specific IIBC subunit; PTS system, maltose and glucose-specific subfamily, IIC subunit; PTS system, glucose-like IIB subunint; KEGG: yen:YE2011 bifunctional PTS system maltose and glucose-specific transporter subunits IICB; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; PTS system maltose and glucose-specific transporter subunit IIBC 2390917 10213193 Rahaq_2186 Rahnella sp. Y9602 PTS system maltose and glucose-specific transporter subunit IIBC YP_004212924.1 2389304 R 741091 CDS YP_004212925.1 322832898 10213194 2391172..2392203 1 NC_015061.1 KEGG: spe:Spro_2271 DNA-binding transcriptional repressor MalI; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator 2392203 10213194 Rahaq_2187 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004212925.1 2391172 D 741091 CDS YP_004212926.1 322832899 10213195 complement(2392401..2392772) 1 NC_015061.1 KEGG: eoh:ECO103_p27 colicin M resistance protein; colicin M resistance protein 2392772 10213195 Rahaq_2188 Rahnella sp. Y9602 colicin M resistance protein YP_004212926.1 2392401 R 741091 CDS YP_004212927.1 322832900 10213196 2392995..2393876 1 NC_015061.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: ebi:EbC_20420 dehydrogenase; 6-phosphogluconate dehydrogenase 2393876 10213196 Rahaq_2189 Rahnella sp. Y9602 6-phosphogluconate dehydrogenase YP_004212927.1 2392995 D 741091 CDS YP_004212928.1 322832901 10213197 2394047..2395075 1 NC_015061.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: pfo:Pfl01_2334 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase 2395075 10213197 Rahaq_2190 Rahnella sp. Y9602 2OG-Fe(II) oxygenase YP_004212928.1 2394047 D 741091 CDS YP_004212929.1 322832902 10213199 complement(2395348..2395806) 1 NC_015061.1 KEGG: sme:SMc00562 transcription regulator protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR 2395806 10213199 Rahaq_2192 Rahnella sp. Y9602 regulatory protein MarR YP_004212929.1 2395348 R 741091 CDS YP_004212930.1 322832903 10213200 2396008..2396421 1 NC_015061.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dal:Dalk_4724 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase 2396421 10213200 Rahaq_2193 Rahnella sp. Y9602 Glyoxalase/bleomycin resistance protein/dioxygenase YP_004212930.1 2396008 D 741091 CDS YP_004212931.1 322832904 10213201 complement(2396560..2397570) 1 NC_015061.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: spe:Spro_3119 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; glyceraldehyde-3-phosphate dehydrogenase, type I 2397570 10213201 Rahaq_2194 Rahnella sp. Y9602 glyceraldehyde-3-phosphate dehydrogenase, type I YP_004212931.1 2396560 R 741091 CDS YP_004212932.1 322832905 10213202 complement(2397649..2398638) 1 NC_015061.1 KEGG: spe:Spro_3120 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain-containing protein; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 2398638 10213202 Rahaq_2195 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004212932.1 2397649 R 741091 CDS YP_004212933.1 322832906 10213203 2398857..2399462 1 NC_015061.1 PFAM: lytic transglycosylase catalytic; KEGG: spe:Spro_4233 lytic transglycosylase catalytic; lytic transglycosylase 2399462 10213203 Rahaq_2196 Rahnella sp. Y9602 lytic transglycosylase YP_004212933.1 2398857 D 741091 CDS YP_004212934.1 322832907 10213204 2399586..2399948 1 NC_015061.1 KEGG: pen:PSEEN2914 hypothetical protein; hypothetical protein 2399948 10213204 Rahaq_2197 Rahnella sp. Y9602 hypothetical protein YP_004212934.1 2399586 D 741091 CDS YP_004212935.1 322832908 10213205 2400083..2400820 1 NC_015061.1 PFAM: metallophosphoesterase; KEGG: esa:ESA_pESA3p05456 hypothetical protein; metallophosphoesterase 2400820 10213205 Rahaq_2198 Rahnella sp. Y9602 metallophosphoesterase YP_004212935.1 2400083 D 741091 CDS YP_004212936.1 322832909 10213206 2400890..2401195 1 NC_015061.1 PFAM: protein of unknown function DUF437; KEGG: ddi:DDB_G0295809 UCP029143 family protein; hypothetical protein 2401195 10213206 Rahaq_2199 Rahnella sp. Y9602 hypothetical protein YP_004212936.1 2400890 D 741091 CDS YP_004212937.1 322832910 10213207 complement(2401245..2401886) 1 NC_015061.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: ebi:EbC_22150 metal dependent phosphohydrolase; metal-dependent phosphohydrolase HD sub domain-containing protein 2401886 10213207 Rahaq_2200 Rahnella sp. Y9602 metal-dependent phosphohydrolase HD sub domain-containing protein YP_004212937.1 2401245 R 741091 CDS YP_004212938.1 322832911 10213208 2402003..2402965 1 NC_015061.1 KEGG: rlg:Rleg_3129 transcriptional regulator, AraC family; PFAM: ThiJ/PfpI domain-containing protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 2402965 10213208 Rahaq_2201 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004212938.1 2402003 D 741091 CDS YP_004212939.1 322832912 10213209 complement(2402982..2403548) 1 NC_015061.1 KEGG: vap:Vapar_3245 DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I 2403548 10213209 Rahaq_2202 Rahnella sp. Y9602 DNA-3-methyladenine glycosylase I YP_004212939.1 2402982 R 741091 CDS YP_004212940.1 322832913 10213210 2403848..2404396 1 NC_015061.1 KEGG: act:ACLA_099330 cation diffusion facilitator; hypothetical protein 2404396 10213210 Rahaq_2203 Rahnella sp. Y9602 hypothetical protein YP_004212940.1 2403848 D 741091 CDS YP_004212941.1 322832914 10213211 2404560..2405495 1 NC_015061.1 KEGG: spe:Spro_2280 DNA replication terminus site-binding protein; TIGRFAM: DNA replication terminus site-binding protein; PFAM: site-binding protein DNA replication region; DNA replication terminus site-binding protein 2405495 10213211 Rahaq_2204 Rahnella sp. Y9602 DNA replication terminus site-binding protein YP_004212941.1 2404560 D 741091 CDS YP_004212942.1 322832915 10213212 complement(2405560..2406957) 1 NC_015061.1 KEGG: spe:Spro_2279 fumarate hydratase; TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; Fumarase C-like; class II fumarate hydratase 2406957 10213212 Rahaq_2205 Rahnella sp. Y9602 class II fumarate hydratase YP_004212942.1 2405560 R 741091 CDS YP_004212943.1 322832916 10213213 2407204..2408385 1 NC_015061.1 TIGRFAM: mannose-6-phosphate isomerase, class I; KEGG: spe:Spro_2277 mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I; mannose-6-phosphate isomerase 2408385 10213213 Rahaq_2206 Rahnella sp. Y9602 mannose-6-phosphate isomerase YP_004212943.1 2407204 D 741091 CDS YP_004212944.1 322832917 10213214 2408520..2410061 1 NC_015061.1 PFAM: protein of unknown function DUF945; KEGG: spe:Spro_2276 hypothetical protein; hypothetical protein 2410061 10213214 Rahaq_2207 Rahnella sp. Y9602 hypothetical protein YP_004212944.1 2408520 D 741091 CDS YP_004212945.1 322832918 10213215 2410211..2410882 1 NC_015061.1 KEGG: ebi:EbC_12190 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2410882 10213215 Rahaq_2208 Rahnella sp. Y9602 ABC transporter YP_004212945.1 2410211 D 741091 CDS YP_004212946.1 322832919 10213216 2410869..2411642 1 NC_015061.1 PFAM: Conserved hypothetical protein CHP00245; KEGG: ebi:EbC_12200 conserved uncharacterized protein; hypothetical protein 2411642 10213216 Rahaq_2209 Rahnella sp. Y9602 hypothetical protein YP_004212946.1 2410869 D 741091 CDS YP_004212947.1 322832920 10213217 complement(2411693..2412388) 1 NC_015061.1 KEGG: pmy:Pmen_3833 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 2412388 10213217 Rahaq_2210 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004212947.1 2411693 R 741091 CDS YP_004212948.1 322832921 10213218 2412654..2413262 1 NC_015061.1 KEGG: eca:ECA0816 hypothetical protein; hypothetical protein 2413262 10213218 Rahaq_2211 Rahnella sp. Y9602 hypothetical protein YP_004212948.1 2412654 D 741091 CDS YP_004212949.1 322832922 10213219 complement(2413301..2415031) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pam:PANA_3313 ModB; binding-protein-dependent transport system inner membrane protein 2415031 10213219 Rahaq_2212 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004212949.1 2413301 R 741091 CDS YP_004212950.1 322832923 10213220 complement(2415051..2416049) 1 NC_015061.1 PFAM: extracellular solute-binding protein family 1; KEGG: pam:PANA_3314 PotD; extracellular solute-binding protein 2416049 10213220 Rahaq_2213 Rahnella sp. Y9602 extracellular solute-binding protein YP_004212950.1 2415051 R 741091 CDS YP_004212951.1 322832924 10213221 complement(2416074..2417141) 1 NC_015061.1 KEGG: pam:PANA_3315 FbpC; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2417141 10213221 Rahaq_2214 Rahnella sp. Y9602 ABC transporter YP_004212951.1 2416074 R 741091 CDS YP_004212952.1 322832925 10213222 complement(2417385..2418155) 1 NC_015061.1 KEGG: spe:Spro_2302 xanthine dehydrogenase accessory protein XdhC; TIGRFAM: xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182; xanthine dehydrogenase accessory protein XdhC 2418155 10213222 Rahaq_2215 Rahnella sp. Y9602 xanthine dehydrogenase accessory protein XdhC YP_004212952.1 2417385 R 741091 CDS YP_004212953.1 322832926 10213223 complement(2418167..2420566) 1 NC_015061.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; manually curated; KEGG: spe:Spro_2301 xanthine dehydrogenase molybdopterin binding subunit; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; xanthine dehydrogenase molybdopterin binding subunit 2420566 10213223 Rahaq_2216 Rahnella sp. Y9602 xanthine dehydrogenase molybdopterin binding subunit YP_004212953.1 2418167 R 741091 CDS YP_004212954.1 322832927 10213224 complement(2420559..2421962) 1 NC_015061.1 KEGG: spe:Spro_2300 xanthine dehydrogenase small subunit; TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain-containing protein; ferredoxin; CO dehydrogenase flavoprotein domain protein; xanthine dehydrogenase small subunit 2421962 10213224 Rahaq_2217 Rahnella sp. Y9602 xanthine dehydrogenase small subunit YP_004212954.1 2420559 R 741091 CDS YP_004212955.1 322832928 10213225 complement(2422078..2422746) 1 NC_015061.1 PFAM: Tetracycline transcriptional regulator YcdC domain-containing protein; regulatory protein TetR; KEGG: vap:Vapar_4749 transcriptional regulator, TetR family; TetR family transcriptional regulator 2422746 10213225 Rahaq_2218 Rahnella sp. Y9602 TetR family transcriptional regulator YP_004212955.1 2422078 R 741091 CDS YP_004212956.1 322832929 10213226 complement(2422743..2424095) 1 NC_015061.1 KEGG: spe:Spro_2299 guanine deaminase; TIGRFAM: guanine deaminase; PFAM: amidohydrolase; guanine deaminase 2424095 10213226 Rahaq_2219 Rahnella sp. Y9602 guanine deaminase YP_004212956.1 2422743 R 741091 CDS YP_004212957.1 322832930 10213227 complement(2424216..2425391) 1 NC_015061.1 KEGG: spe:Spro_2298 ROK family protein; PFAM: ROK family protein; SMART: regulatory protein Crp; ROK family protein 2425391 10213227 Rahaq_2220 Rahnella sp. Y9602 ROK family protein YP_004212957.1 2424216 R 741091 CDS YP_004212958.1 322832931 10213228 2425931..2427181 1 NC_015061.1 PFAM: extracellular solute-binding protein family 1; KEGG: spe:Spro_2297 extracellular solute-binding protein; extracellular solute-binding protein 2427181 10213228 Rahaq_2221 Rahnella sp. Y9602 extracellular solute-binding protein YP_004212958.1 2425931 D 741091 CDS YP_004212959.1 322832932 10213229 2427242..2428144 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2296 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2428144 10213229 Rahaq_2222 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004212959.1 2427242 D 741091 CDS YP_004212960.1 322832933 10213230 2428141..2428980 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2295 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2428980 10213230 Rahaq_2223 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004212960.1 2428141 D 741091 CDS YP_004212961.1 322832934 10213231 2429007..2429960 1 NC_015061.1 PFAM: PfkB domain protein; KEGG: spe:Spro_2294 ribokinase-like domain-containing protein; PfkB domain-containing protein 2429960 10213231 Rahaq_2224 Rahnella sp. Y9602 PfkB domain-containing protein YP_004212961.1 2429007 D 741091 CDS YP_004212962.1 322832935 10213232 2429961..2431055 1 NC_015061.1 KEGG: spe:Spro_2293 ABC transporter-related protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter 2431055 10213232 Rahaq_2225 Rahnella sp. Y9602 ABC transporter YP_004212962.1 2429961 D 741091 CDS YP_004212963.1 322832936 10213233 2431081..2432136 1 NC_015061.1 PFAM: aldo/keto reductase; KEGG: ara:Arad_2859 oxidoreductase protein; aldo/keto reductase 2432136 10213233 Rahaq_2226 Rahnella sp. Y9602 aldo/keto reductase YP_004212963.1 2431081 D 741091 CDS YP_004212964.1 322832937 10213234 2432263..2433012 1 NC_015061.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pct:PC1_2050 3-hydroxy acid dehydrogenase; short-chain dehydrogenase/reductase SDR 2433012 10213234 Rahaq_2227 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004212964.1 2432263 D 741091 CDS YP_004212965.1 322832938 10213235 complement(2433140..2434435) 1 NC_015061.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: sgl:SG1135 transport protein; xanthine/uracil/vitamin C permease 2434435 10213235 Rahaq_2228 Rahnella sp. Y9602 xanthine/uracil/vitamin C permease YP_004212965.1 2433140 R 741091 CDS YP_004212966.1 322832939 10213236 2434747..2435652 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eay:EAM_3341 LysR-family transcriptional regulator; LysR family transcriptional regulator 2435652 10213236 Rahaq_2229 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004212966.1 2434747 D 741091 CDS YP_004212967.1 322832940 10213237 complement(2435657..2435983) 1 NC_015061.1 PFAM: protein of unknown function UPF0060; KEGG: spe:Spro_2289 hypothetical protein; hypothetical protein 2435983 10213237 Rahaq_2230 Rahnella sp. Y9602 hypothetical protein YP_004212967.1 2435657 R 741091 CDS YP_004212968.1 322832941 10213238 2436116..2436484 1 NC_015061.1 PFAM: protein of unknown function DUF1283; KEGG: yen:YE2026 hypothetical protein; hypothetical protein 2436484 10213238 Rahaq_2231 Rahnella sp. Y9602 hypothetical protein YP_004212968.1 2436116 D 741091 CDS YP_004212969.1 322832942 10213239 2436537..2436830 1 NC_015061.1 PFAM: protein of unknown function DUF1161; KEGG: spe:Spro_2287 hypothetical protein; hypothetical protein 2436830 10213239 Rahaq_2232 Rahnella sp. Y9602 hypothetical protein YP_004212969.1 2436537 D 741091 CDS YP_004212970.1 322832943 10213240 2437150..2437416 1 NC_015061.1 KEGG: pct:PC1_2084 hypothetical protein; hypothetical protein 2437416 10213240 Rahaq_2233 Rahnella sp. Y9602 hypothetical protein YP_004212970.1 2437150 D 741091 CDS YP_004212971.1 322832944 10213241 complement(2437460..2439079) 1 NC_015061.1 KEGG: avn:Avin_30960 rhodanese-like protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; rhodanese domain-containing protein 2439079 10213241 Rahaq_2234 Rahnella sp. Y9602 rhodanese domain-containing protein YP_004212971.1 2437460 R 741091 CDS YP_004212972.1 322832945 10213242 complement(2439072..2439677) 1 NC_015061.1 KEGG: pfs:PFLU3685 hypothetical protein; hypothetical protein 2439677 10213242 Rahaq_2235 Rahnella sp. Y9602 hypothetical protein YP_004212972.1 2439072 R 741091 CDS YP_004212973.1 322832946 10213243 2439865..2440758 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: psp:PSPPH_3611 LysR family transcriptional regulator; LysR family transcriptional regulator 2440758 10213243 Rahaq_2236 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004212973.1 2439865 D 741091 CDS YP_004212974.1 322832947 10213244 2440959..2442056 1 NC_015061.1 KEGG: ebi:EbC_32590 alkanesulfonate monooxygenase; PFAM: luciferase; alkanesulfonate monooxygenase 2442056 10213244 Rahaq_2237 Rahnella sp. Y9602 alkanesulfonate monooxygenase YP_004212974.1 2440959 D 741091 CDS YP_004212975.1 322832948 10213245 2442066..2443004 1 NC_015061.1 KEGG: pag:PLES_25751 periplasmic aliphatic sulfonate-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; aliphatic sulfonates ABC transporter substrate-binding protein 2443004 10213245 Rahaq_2238 Rahnella sp. Y9602 aliphatic sulfonates ABC transporter substrate-binding protein YP_004212975.1 2442066 D 741091 CDS YP_004212976.1 322832949 10213246 2443153..2443875 1 NC_015061.1 PFAM: ThiJ/PfpI domain-containing protein; KEGG: pam:PANA_1582 hypothetical protein; ThiJ/PfpI domain-containing protein 2443875 10213246 Rahaq_2239 Rahnella sp. Y9602 ThiJ/PfpI domain-containing protein YP_004212976.1 2443153 D 741091 CDS YP_004212977.1 322832950 10213247 2443983..2444210 1 NC_015061.1 KEGG: cti:RALTA_A2347 hypothetical protein; hypothetical protein 2444210 10213247 Rahaq_2240 Rahnella sp. Y9602 hypothetical protein YP_004212977.1 2443983 D 741091 CDS YP_004212978.1 322832951 10213248 complement(2444318..2445577) 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: kpu:KP1_2796 permease of the major facilitator superfamily; major facilitator superfamily protein 2445577 10213248 Rahaq_2241 Rahnella sp. Y9602 major facilitator superfamily protein YP_004212978.1 2444318 R 741091 CDS YP_004212979.1 322832952 10213249 complement(2445832..2447001) 1 NC_015061.1 KEGG: spe:Spro_2636 D-alanyl-D-alanine carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; Beta-lactamase 2447001 10213249 Rahaq_2242 Rahnella sp. Y9602 Beta-lactamase YP_004212979.1 2445832 R 741091 CDS YP_004212980.1 322832953 10213250 2447460..2449766 1 NC_015061.1 TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; KEGG: spe:Spro_2637 oxidoreductase alpha (molybdopterin) subunit; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; oxidoreductase alpha (molybdopterin) subunit 2449766 10213250 Rahaq_2243 Rahnella sp. Y9602 oxidoreductase alpha (molybdopterin) subunit YP_004212980.1 2447460 D 741091 CDS YP_004212981.1 322832954 10213251 2449916..2451859 1 NC_015061.1 SMART: Cold shock protein; TIGRFAM: exoribonuclease II; VacB and RNase II family 3'-5' exoribonuclease; KEGG: spe:Spro_2638 exoribonuclease II; PFAM: ribonuclease II; Ribonuclease B OB region domain; exoribonuclease II 2451859 10213251 Rahaq_2244 Rahnella sp. Y9602 exoribonuclease II YP_004212981.1 2449916 D 741091 CDS YP_004212982.1 322832955 10213252 complement(2451987..2452940) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2917 transcriptional regulator CysB-like protein; LysR family transcriptional regulator 2452940 10213252 Rahaq_2245 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004212982.1 2451987 R 741091 CDS YP_004212983.1 322832956 10213253 complement(2453133..2454077) 1 NC_015061.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: spe:Spro_2452 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 2454077 10213253 Rahaq_2246 Rahnella sp. Y9602 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_004212983.1 2453133 R 741091 CDS YP_004212984.1 322832957 10213254 2454290..2456572 1 NC_015061.1 TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; KEGG: psa:PST_2142 glycogen operon protein GlgX; SMART: alpha amylase catalytic sub domain; glycogen debranching protein GlgX 2456572 10213254 Rahaq_2247 Rahnella sp. Y9602 glycogen debranching protein GlgX YP_004212984.1 2454290 D 741091 CDS YP_004212985.1 322832958 10213255 complement(2456619..2457659) 1 NC_015061.1 PFAM: ApbE family lipoprotein; KEGG: ebi:EbC_30280 thiamine biosynthesis lipoprotein; ApbE family lipoprotein 2457659 10213255 Rahaq_2248 Rahnella sp. Y9602 ApbE family lipoprotein YP_004212985.1 2456619 R 741091 CDS YP_004212986.1 322832959 10213256 complement(2457774..2458340) 1 NC_015061.1 KEGG: esa:ESA_01951 hypothetical protein; PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2; Smr protein/MutS2 2458340 10213256 Rahaq_2249 Rahnella sp. Y9602 Smr protein/MutS2 YP_004212986.1 2457774 R 741091 CDS YP_004212987.1 322832960 10213257 2458555..2459370 1 NC_015061.1 TIGRFAM: mannosyl-3-phosphoglycerate phosphatase family; HAD-superfamily hydrolase, subfamily IIB; KEGG: ebi:EbC_26740 mannosyl-3-phosphoglycerate phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; mannosyl-3-phosphoglycerate phosphatase family protein 2459370 10213257 Rahaq_2250 Rahnella sp. Y9602 mannosyl-3-phosphoglycerate phosphatase family protein YP_004212987.1 2458555 D 741091 CDS YP_004212988.1 322832961 10213258 2459490..2460710 1 NC_015061.1 KEGG: spe:Spro_2340 hypothetical protein; hypothetical protein 2460710 10213258 Rahaq_2251 Rahnella sp. Y9602 hypothetical protein YP_004212988.1 2459490 D 741091 CDS YP_004212989.1 322832962 10213259 complement(2460790..2461815) 1 NC_015061.1 PFAM: Integral membrane protein TerC; KEGG: esa:ESA_01799 hypothetical protein; integral membrane protein TerC 2461815 10213259 Rahaq_2252 Rahnella sp. Y9602 integral membrane protein TerC YP_004212989.1 2460790 R 741091 CDS YP_004212990.1 322832963 10213260 2462256..2463011 1 NC_015061.1 KEGG: ddc:Dd586_2030 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; Crp/Fnr family transcriptional regulator 2463011 10213260 Rahaq_2253 Rahnella sp. Y9602 Crp/Fnr family transcriptional regulator YP_004212990.1 2462256 D 741091 CDS YP_004212991.1 322832964 10213261 2463147..2464106 1 NC_015061.1 PFAM: UspA domain-containing protein; KEGG: spe:Spro_2583 universal stress protein UspE; UspA domain-containing protein 2464106 10213261 Rahaq_2254 Rahnella sp. Y9602 UspA domain-containing protein YP_004212991.1 2463147 D 741091 CDS YP_004212992.1 322832965 10213262 complement(2464175..2465566) 1 NC_015061.1 KEGG: yen:YE2077 pyridine nucleotide transhydrogenase; PFAM: NAD(P) transhydrogenase subunit beta; NAD(P)(+) transhydrogenase 2465566 10213262 Rahaq_2255 Rahnella sp. Y9602 NAD(P)(+) transhydrogenase YP_004212992.1 2464175 R 741091 CDS YP_004212993.1 322832966 10213263 complement(2465576..2467105) 1 NC_015061.1 KEGG: yen:YE2078 NAD(P) transhydrogenase subunit alpha; TIGRFAM: NAD(P) transhydrogenase, subunit alpha; PFAM: alanine dehydrogenase/PNT domain protein; NAD(P) transhydrogenase subunit alpha 2467105 10213263 Rahaq_2256 Rahnella sp. Y9602 NAD(P) transhydrogenase subunit alpha YP_004212993.1 2465576 R 741091 CDS YP_004212994.1 322832967 10213264 2467641..2468594 1 NC_015061.1 PFAM: protein of unknown function DUF1471; KEGG: spe:Spro_2586 hypothetical protein; hypothetical protein 2468594 10213264 Rahaq_2257 Rahnella sp. Y9602 hypothetical protein YP_004212994.1 2467641 D 741091 CDS YP_004212995.1 322832968 10213265 complement(2468826..2469938) 1 NC_015061.1 KEGG: ebi:EbC_43470 renal dipeptidase; PFAM: peptidase M19 renal dipeptidase; membrane dipeptidase 2469938 10213265 Rahaq_2258 Rahnella sp. Y9602 membrane dipeptidase YP_004212995.1 2468826 R 741091 CDS YP_004212996.1 322832969 10213266 2470189..2471784 1 NC_015061.1 PFAM: extracellular solute-binding protein family 5; KEGG: dze:Dd1591_3993 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein 2471784 10213266 Rahaq_2259 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004212996.1 2470189 D 741091 CDS YP_004212997.1 322832970 10213267 2471781..2472794 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_43490 dipeptide ABC transporter membrane spanning protein; binding-protein-dependent transport system inner membrane protein 2472794 10213267 Rahaq_2260 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004212997.1 2471781 D 741091 CDS YP_004212998.1 322832971 10213268 2472791..2473717 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddd:Dda3937_03241 dipeptide transport system permease; binding-protein-dependent transport system inner membrane protein 2473717 10213268 Rahaq_2261 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004212998.1 2472791 D 741091 CDS YP_004212999.1 322832972 10213269 2473717..2474547 1 NC_015061.1 KEGG: dze:Dd1591_3990 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2474547 10213269 Rahaq_2262 Rahnella sp. Y9602 ABC transporter YP_004212999.1 2473717 D 741091 CDS YP_004213000.1 322832973 10213270 2474544..2475317 1 NC_015061.1 KEGG: atu:Atu2514 ABC transporter nucleotide binding/ATPase protein (dipeptide); PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2475317 10213270 Rahaq_2263 Rahnella sp. Y9602 ABC transporter YP_004213000.1 2474544 D 741091 CDS YP_004213001.1 322832974 10213271 2475401..2476954 1 NC_015061.1 PFAM: beta-lactamase; KEGG: spe:Spro_2075 beta-lactamase; beta-lactamase 2476954 10213271 Rahaq_2264 Rahnella sp. Y9602 beta-lactamase YP_004213001.1 2475401 D 741091 CDS YP_004213002.1 322832975 10213272 2477164..2479143 1 NC_015061.1 KEGG: dda:Dd703_4011 oxidoreductase Fe-S binding subunit; TIGRFAM: glutamate synthase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutamate synthase, small subunit 2479143 10213272 Rahaq_2265 Rahnella sp. Y9602 glutamate synthase, small subunit YP_004213002.1 2477164 D 741091 CDS YP_004213003.1 322832976 10213273 2479561..2480037 1 NC_015061.1 PFAM: protein of unknown function DUF336; KEGG: spe:Spro_2088 hypothetical protein; hypothetical protein 2480037 10213273 Rahaq_2266 Rahnella sp. Y9602 hypothetical protein YP_004213003.1 2479561 D 741091 CDS YP_004213004.1 322832977 10213274 2480116..2480685 1 NC_015061.1 KEGG: eay:EAM_1911 gluconate dehydrogenase subunit; gluconate dehydrogenase subunit 2480685 10213274 Rahaq_2267 Rahnella sp. Y9602 gluconate dehydrogenase subunit YP_004213004.1 2480116 D 741091 CDS YP_004213005.1 322832978 10213275 2480678..2482282 1 NC_015061.1 PFAM: FAD dependent oxidoreductase; glucose-methanol-choline oxidoreductase; KEGG: ebi:EbC_05300 glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase 2482282 10213275 Rahaq_2268 Rahnella sp. Y9602 FAD dependent oxidoreductase YP_004213005.1 2480678 D 741091 CDS YP_004213006.1 322832979 10213276 2482305..2483627 1 NC_015061.1 KEGG: spe:Spro_2085 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I; gluconate 2-dehydrogenase (acceptor) 2483627 10213276 Rahaq_2269 Rahnella sp. Y9602 gluconate 2-dehydrogenase (acceptor) YP_004213006.1 2482305 D 741091 CDS YP_004213007.1 322832980 10213277 2484518..2485225 1 NC_015061.1 KEGG: esa:ESA_00559 hypothetical protein; hypothetical protein 2485225 10213277 Rahaq_2270 Rahnella sp. Y9602 hypothetical protein YP_004213007.1 2484518 D 741091 CDS YP_004213008.1 322832981 10213278 2485647..2487314 1 NC_015061.1 KEGG: spe:Spro_1995 sulfate transporter YchM; TIGRFAM: sulfate transporter; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; sulfate transporter 2487314 10213278 Rahaq_2271 Rahnella sp. Y9602 sulfate transporter YP_004213008.1 2485647 D 741091 CDS YP_004213009.1 322832982 10213279 complement(2487533..2488387) 1 NC_015061.1 KEGG: spe:Spro_1994 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; 2-dehydro-3-deoxyphosphooctonate aldolase 2488387 10213279 Rahaq_2272 Rahnella sp. Y9602 2-dehydro-3-deoxyphosphooctonate aldolase YP_004213009.1 2487533 R 741091 CDS YP_004213010.1 322832983 10213280 complement(2488483..2489292) 1 NC_015061.1 KEGG: yen:YE2428 transcriptional regulator; transcriptional regulator 2489292 10213280 Rahaq_2273 Rahnella sp. Y9602 transcriptional regulator YP_004213010.1 2488483 R 741091 CDS YP_004213011.1 322832984 10213281 complement(2489295..2489684) 1 NC_015061.1 PFAM: Invasion gene expression up-regulator SirB; KEGG: yen:YE2429 hypothetical protein; Invasion gene expression up-regulator SirB 2489684 10213281 Rahaq_2274 Rahnella sp. Y9602 Invasion gene expression up-regulator SirB YP_004213011.1 2489295 R 741091 CDS YP_004213012.1 322832985 10213282 complement(2489704..2490573) 1 NC_015061.1 KEGG: spe:Spro_1991 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: methyltransferase small; protein-(glutamine-N5) methyltransferase 2490573 10213282 Rahaq_2275 Rahnella sp. Y9602 protein-(glutamine-N5) methyltransferase YP_004213012.1 2489704 R 741091 CDS YP_004213013.1 322832986 10213283 complement(2490573..2491655) 1 NC_015061.1 KEGG: spe:Spro_1990 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; peptide chain release factor 1 2491655 10213283 Rahaq_2276 Rahnella sp. Y9602 peptide chain release factor 1 YP_004213013.1 2490573 R 741091 CDS YP_004213014.1 322832987 10213284 complement(2491688..2492950) 1 NC_015061.1 KEGG: spe:Spro_1989 glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; Shikimate/quinate 5-dehydrogenase; glutamyl-tRNA reductase 2492950 10213284 Rahaq_2277 Rahnella sp. Y9602 glutamyl-tRNA reductase YP_004213014.1 2491688 R 741091 CDS YP_004213015.1 322832988 10213285 2493213..2493836 1 NC_015061.1 KEGG: ypz:YPZ3_1804 outer membrane lipoprotein LolB precursor; TIGRFAM: outer membrane lipoprotein LolB; PFAM: outer membrane lipoprotein LolB; outer membrane lipoprotein LolB 2493836 10213285 Rahaq_2278 Rahnella sp. Y9602 outer membrane lipoprotein LolB YP_004213015.1 2493213 D 741091 CDS YP_004213016.1 322832989 10213286 2493838..2494701 1 NC_015061.1 TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: ypb:YPTS_2060 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 2494701 10213286 Rahaq_2279 Rahnella sp. Y9602 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_004213016.1 2493838 D 741091 CDS YP_004213017.1 322832990 10213287 2494864..2495811 1 NC_015061.1 TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: spe:Spro_1986 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 2495811 10213287 Rahaq_2280 Rahnella sp. Y9602 ribose-phosphate pyrophosphokinase YP_004213017.1 2494864 D 741091 CDS YP_004213018.1 322832991 10213288 complement(2495934..2496212) 1 NC_015061.1 PFAM: Protein of unknown function DUF2583; KEGG: etr:ETAE_1400 hypothetical protein; hypothetical protein 2496212 10213288 Rahaq_2281 Rahnella sp. Y9602 hypothetical protein YP_004213018.1 2495934 R 741091 CDS YP_004213019.1 322832992 10213289 2496520..2497095 1 NC_015061.1 TIGRFAM: peptidyl-tRNA hydrolase; KEGG: spe:Spro_1984 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 2497095 10213289 Rahaq_2282 Rahnella sp. Y9602 peptidyl-tRNA hydrolase YP_004213019.1 2496520 D 741091 CDS YP_004213020.1 322832993 10213290 complement(2497153..2499066) 1 NC_015061.1 KEGG: pae:PA2435 cation-transporting P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; heavy metal translocating P-type ATPase 2499066 10213290 Rahaq_2283 Rahnella sp. Y9602 heavy metal translocating P-type ATPase YP_004213020.1 2497153 R 741091 CDS YP_004213021.1 322832994 10213291 complement(2499079..2500122) 1 NC_015061.1 KEGG: pag:PLES_28571 hypothetical protein; PFAM: band 7 protein; SMART: band 7 protein; hypothetical protein 2500122 10213291 Rahaq_2284 Rahnella sp. Y9602 hypothetical protein YP_004213021.1 2499079 R 741091 CDS YP_004213022.1 322832995 10213292 complement(2500119..2501159) 1 NC_015061.1 KEGG: pfl:PFL_6193 SPFH domain-containing protein; PFAM: band 7 protein; SMART: band 7 protein; hypothetical protein 2501159 10213292 Rahaq_2285 Rahnella sp. Y9602 hypothetical protein YP_004213022.1 2500119 R 741091 CDS YP_004213023.1 322832996 10213293 complement(2501156..2503114) 1 NC_015061.1 PFAM: band 7 protein; KEGG: pfo:Pfl01_5670 band 7 protein; hypothetical protein 2503114 10213293 Rahaq_2286 Rahnella sp. Y9602 hypothetical protein YP_004213023.1 2501156 R 741091 CDS YP_004213024.1 322832997 10213294 complement(2503327..2504808) 1 NC_015061.1 PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: spe:Spro_1983 sulphate transporter; sulfate transporter 2504808 10213294 Rahaq_2287 Rahnella sp. Y9602 sulfate transporter YP_004213024.1 2503327 R 741091 CDS YP_004213025.1 322832998 10213295 2505027..2506118 1 NC_015061.1 KEGG: pct:PC1_2121 GTP-dependent nucleic acid-binding protein EngD; TIGRFAM: GTP-binding protein YchF; PFAM: protein of unknown function DUF933; GTP-binding protein HSR1-related; GTP-binding protein YchF 2506118 10213295 Rahaq_2288 Rahnella sp. Y9602 GTP-binding protein YchF YP_004213025.1 2505027 D 741091 CDS YP_004213026.1 322832999 10213296 2506291..2506638 1 NC_015061.1 KEGG: dze:Dd1591_2455 hypothetical protein; PFAM: HNH endonuclease; SMART: HNH nuclease; HNH endonuclease 2506638 10213296 Rahaq_2289 Rahnella sp. Y9602 HNH endonuclease YP_004213026.1 2506291 D 741091 CDS YP_004213027.1 322833000 10213297 2506849..2509056 1 NC_015061.1 KEGG: ebi:EbC_16040 TonB-dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; TonB-dependent siderophore receptor 2509056 10213297 Rahaq_2290 Rahnella sp. Y9602 TonB-dependent siderophore receptor YP_004213027.1 2506849 D 741091 CDS YP_004213028.1 322833001 10213298 2509180..2510184 1 NC_015061.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ddd:Dda3937_00500 ISEch4 transposase; transposase IS116/IS110/IS902 family protein 2510184 10213298 Rahaq_2291 Rahnella sp. Y9602 transposase IS116/IS110/IS902 family protein YP_004213028.1 2509180 D 741091 CDS YP_004213029.1 322833002 10213299 complement(2510484..2511668) 1 NC_015061.1 KEGG: esa:ESA_pESA3p05442 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase 2511668 10213299 Rahaq_2292 Rahnella sp. Y9602 integral membrane sensor signal transduction histidine kinase YP_004213029.1 2510484 R 741091 CDS YP_004213030.1 322833003 10213300 complement(2511665..2512363) 1 NC_015061.1 KEGG: enc:ECL_02241 DNA-binding response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator 2512363 10213300 Rahaq_2293 Rahnella sp. Y9602 transcriptional regulator YP_004213030.1 2511665 R 741091 CDS YP_004213031.1 322833004 10213301 complement(2512525..2521074) 1 NC_015061.1 PFAM: glycosyltransferase 36 associated; glycosyltransferase 36; carbohydrate binding; KEGG: spe:Spro_3285 glycosyltransferase 36; glycosyltransferase 36 associated 2521074 10213301 Rahaq_2294 Rahnella sp. Y9602 glycosyltransferase 36 associated YP_004213031.1 2512525 R 741091 CDS YP_004213032.1 322833005 10213302 2521418..2522056 1 NC_015061.1 PFAM: nitroreductase; KEGG: ebi:EbC_27860 nitroreductase; nitroreductase 2522056 10213302 Rahaq_2295 Rahnella sp. Y9602 nitroreductase YP_004213032.1 2521418 D 741091 CDS YP_004213033.1 322833006 10213303 2522360..2523910 1 NC_015061.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: rle:RL0485 GGDEF/EAL domain-containing protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 2523910 10213303 Rahaq_2296 Rahnella sp. Y9602 diguanylate cyclase/phosphodiesterase YP_004213033.1 2522360 D 741091 CDS YP_004213034.1 322833007 10213304 complement(2523856..2524857) 1 NC_015061.1 KEGG: kpn:KPN_01851 regulatory protein MarR; PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator 2524857 10213304 Rahaq_2297 Rahnella sp. Y9602 MarR family transcriptional regulator YP_004213034.1 2523856 R 741091 CDS YP_004213035.1 322833008 10213305 2524997..2525848 1 NC_015061.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: ebi:EbC_36230 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 2525848 10213305 Rahaq_2298 Rahnella sp. Y9602 RpiR family transcriptional regulator YP_004213035.1 2524997 D 741091 CDS YP_004213036.1 322833009 10213306 2526099..2526935 1 NC_015061.1 KEGG: ebi:EbC_36210 polar amino acid ABC transporter periplasmic ligand binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 2526935 10213306 Rahaq_2299 Rahnella sp. Y9602 family 3 extracellular solute-binding protein YP_004213036.1 2526099 D 741091 CDS YP_004213037.1 322833010 10213307 2526939..2527568 1 NC_015061.1 PFAM: Domain of unknown function DUF1989; KEGG: ebi:EbC_36200 conserved uncharacterized protein; hypothetical protein 2527568 10213307 Rahaq_2300 Rahnella sp. Y9602 hypothetical protein YP_004213037.1 2526939 D 741091 CDS YP_004213038.1 322833011 10213308 2527552..2528199 1 NC_015061.1 PFAM: Domain of unknown function DUF1989; KEGG: ebi:EbC_36190 conserved uncharacterized protein; hypothetical protein 2528199 10213308 Rahaq_2301 Rahnella sp. Y9602 hypothetical protein YP_004213038.1 2527552 D 741091 CDS YP_004213039.1 322833012 10213309 2528203..2528856 1 NC_015061.1 KEGG: ebi:EbC_36180 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 2528856 10213309 Rahaq_2302 Rahnella sp. Y9602 polar amino acid ABC transporter inner membrane subunit YP_004213039.1 2528203 D 741091 CDS YP_004213040.1 322833013 10213310 2528856..2529521 1 NC_015061.1 KEGG: ebi:EbC_36170 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 2529521 10213310 Rahaq_2303 Rahnella sp. Y9602 polar amino acid ABC transporter inner membrane subunit YP_004213040.1 2528856 D 741091 CDS YP_004213041.1 322833014 10213311 2529535..2530212 1 NC_015061.1 PFAM: Domain of unknown function DUF1989; KEGG: ebi:EbC_36160 conserved uncharacterized protein; hypothetical protein 2530212 10213311 Rahaq_2304 Rahnella sp. Y9602 hypothetical protein YP_004213041.1 2529535 D 741091 CDS YP_004213042.1 322833015 10213312 complement(2530346..2530990) 1 NC_015061.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: ctu:Ctu_35470 hypothetical protein; coenzyme F420-dependent NADP oxidoreductase 2530990 10213312 Rahaq_2305 Rahnella sp. Y9602 coenzyme F420-dependent NADP oxidoreductase YP_004213042.1 2530346 R 741091 CDS YP_004213043.1 322833016 10213313 2531096..2531983 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pam:PANA_0501 YafC; LysR family transcriptional regulator 2531983 10213313 Rahaq_2306 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004213043.1 2531096 D 741091 CDS YP_004213044.1 322833017 10213314 complement(2532009..2532425) 1 NC_015061.1 KEGG: xbo:XBJ1_1433 conserved hypothetical protein; exported protein; hypothetical protein 2532425 10213314 Rahaq_2307 Rahnella sp. Y9602 hypothetical protein YP_004213044.1 2532009 R 741091 CDS YP_004213045.1 322833018 10213316 2533649..2534971 1 NC_015061.1 PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein; transposase IS4 family protein 2534971 10213316 Rahaq_2309 Rahnella sp. Y9602 transposase IS4 family protein YP_004213045.1 2533649 D 741091 CDS YP_004213046.1 322833019 10213317 complement(2535027..2537804) 1 NC_015061.1 KEGG: ebi:EbC_17380 NADH:flavin oxidoreductase; TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; NADH:flavin oxidoreductase/NADH oxidase; FMN-binding domain protein; flavocytochrome c 2537804 10213317 Rahaq_2310 Rahnella sp. Y9602 flavocytochrome c YP_004213046.1 2535027 R 741091 CDS YP_004213047.1 322833020 10213318 2538382..2539893 1 NC_015061.1 KEGG: ebi:EbC_17370 tartrate carrier (tartrate transporter) (tartrate/succinate antiporter); TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; anion transporter 2539893 10213318 Rahaq_2311 Rahnella sp. Y9602 anion transporter YP_004213047.1 2538382 D 741091 CDS YP_004213048.1 322833021 10213319 complement(2539959..2540624) 1 NC_015061.1 KEGG: dda:Dd703_1190 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 2540624 10213319 Rahaq_2312 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004213048.1 2539959 R 741091 CDS YP_004213049.1 322833022 10213320 2540734..2542305 1 NC_015061.1 PFAM: extracellular solute-binding protein family 5; KEGG: dda:Dd703_1189 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein 2542305 10213320 Rahaq_2313 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004213049.1 2540734 D 741091 CDS YP_004213050.1 322833023 10213321 2542302..2543147 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dda:Dd703_1188 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2543147 10213321 Rahaq_2314 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213050.1 2542302 D 741091 CDS YP_004213051.1 322833024 10213322 2543149..2544063 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dda:Dd703_1187 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2544063 10213322 Rahaq_2315 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213051.1 2543149 D 741091 CDS YP_004213052.1 322833025 10213323 2544060..2545442 1 NC_015061.1 PFAM: peptidase M20; KEGG: dda:Dd703_1186 peptidase M20; peptidase M20 2545442 10213323 Rahaq_2316 Rahnella sp. Y9602 peptidase M20 YP_004213052.1 2544060 D 741091 CDS YP_004213053.1 322833026 10213324 2545503..2546504 1 NC_015061.1 KEGG: dda:Dd703_1185 pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; PFAM: Pyridoxal-5'-phosphate-dependent protein subunit beta; 1-aminocyclopropane-1-carboxylate deaminase 2546504 10213324 Rahaq_2317 Rahnella sp. Y9602 1-aminocyclopropane-1-carboxylate deaminase YP_004213053.1 2545503 D 741091 CDS YP_004213054.1 322833027 10213325 2546506..2547504 1 NC_015061.1 PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: dda:Dd703_1184 ornithine cyclodeaminase/mu-crystallin; ornithine cyclodeaminase/mu-crystallin 2547504 10213325 Rahaq_2318 Rahnella sp. Y9602 ornithine cyclodeaminase/mu-crystallin YP_004213054.1 2546506 D 741091 CDS YP_004213055.1 322833028 10213326 2547497..2548366 1 NC_015061.1 KEGG: dda:Dd703_1183 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; rhodanese domain-containing protein 2548366 10213326 Rahaq_2319 Rahnella sp. Y9602 rhodanese domain-containing protein YP_004213055.1 2547497 D 741091 CDS YP_004213056.1 322833029 10213327 complement(2548359..2549987) 1 NC_015061.1 KEGG: dda:Dd703_1182 ABC transporter related; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter 2549987 10213327 Rahaq_2320 Rahnella sp. Y9602 ABC transporter YP_004213056.1 2548359 R 741091 CDS YP_004213057.1 322833030 10213328 2550448..2551020 1 NC_015061.1 KEGG: enc:ECL_A246 hypothetical protein; hypothetical protein 2551020 10213328 Rahaq_2321 Rahnella sp. Y9602 hypothetical protein YP_004213057.1 2550448 D 741091 CDS YP_004213058.1 322833031 10213329 complement(2551581..2552186) 1 NC_015061.1 PFAM: Glutathione S-transferase domain; KEGG: kva:Kvar_2533 glutathione S-transferase domain protein; glutathione S-transferase 2552186 10213329 Rahaq_2322 Rahnella sp. Y9602 glutathione S-transferase YP_004213058.1 2551581 R 741091 CDS YP_004213059.1 322833032 10213330 2552317..2553195 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kva:Kvar_2532 transcriptional regulator, LysR family; LysR family transcriptional regulator 2553195 10213330 Rahaq_2323 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004213059.1 2552317 D 741091 CDS YP_004213060.1 322833033 10213331 complement(2553264..2554121) 1 NC_015061.1 KEGG: psb:Psyr_3543 helix-turn-helix, AraC type:AraC-type transcriptional regulator, N-terminal; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 2554121 10213331 Rahaq_2324 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004213060.1 2553264 R 741091 CDS YP_004213061.1 322833034 10213332 2554298..2555050 1 NC_015061.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: psb:Psyr_3542 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2555050 10213332 Rahaq_2325 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004213061.1 2554298 D 741091 CDS YP_004213062.1 322833035 10213333 complement(2555347..2555556) 1 NC_015061.1 KEGG: pam:PANA_1616 hypothetical protein; hypothetical protein 2555556 10213333 Rahaq_2326 Rahnella sp. Y9602 hypothetical protein YP_004213062.1 2555347 R 741091 CDS YP_004213063.1 322833036 10213334 complement(2555662..2556411) 1 NC_015061.1 PFAM: alpha/beta hydrolase fold; KEGG: pmy:Pmen_3124 alpha/beta hydrolase fold; alpha/beta hydrolase 2556411 10213334 Rahaq_2327 Rahnella sp. Y9602 alpha/beta hydrolase YP_004213063.1 2555662 R 741091 CDS YP_004213064.1 322833037 10213335 complement(2556472..2557032) 1 NC_015061.1 PFAM: protein of unknown function DUF1234; KEGG: nde:NIDE3617 hypothetical protein; hypothetical protein 2557032 10213335 Rahaq_2328 Rahnella sp. Y9602 hypothetical protein YP_004213064.1 2556472 R 741091 CDS YP_004213065.1 322833038 10213336 2557157..2557600 1 NC_015061.1 KEGG: rso:RSc0128 transcription regulator protein; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 2557600 10213336 Rahaq_2329 Rahnella sp. Y9602 AsnC family transcriptional regulator YP_004213065.1 2557157 D 741091 CDS YP_004213066.1 322833039 10213337 complement(2557820..2558299) 1 NC_015061.1 KEGG: ent:Ent638_1863 hypothetical protein; hypothetical protein 2558299 10213337 Rahaq_2330 Rahnella sp. Y9602 hypothetical protein YP_004213066.1 2557820 R 741091 CDS YP_004213067.1 322833040 10213338 complement(2558308..2559696) 1 NC_015061.1 KEGG: pct:PC1_2700 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 2559696 10213338 Rahaq_2331 Rahnella sp. Y9602 integral membrane sensor signal transduction histidine kinase YP_004213067.1 2558308 R 741091 CDS YP_004213068.1 322833041 10213339 complement(2559696..2560373) 1 NC_015061.1 KEGG: ent:Ent638_1861 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator 2560373 10213339 Rahaq_2332 Rahnella sp. Y9602 transcriptional regulator YP_004213068.1 2559696 R 741091 CDS YP_004213069.1 322833042 10213340 2560580..2561416 1 NC_015061.1 PFAM: MltA-interacting MipA family protein; KEGG: ent:Ent638_1860 MltA-interacting MipA family protein; MltA-interacting MipA family protein 2561416 10213340 Rahaq_2333 Rahnella sp. Y9602 MltA-interacting MipA family protein YP_004213069.1 2560580 D 741091 CDS YP_004213070.1 322833043 10213341 complement(2561539..2562288) 1 NC_015061.1 KEGG: cps:CPS_3023 hypothetical protein; hypothetical protein 2562288 10213341 Rahaq_2334 Rahnella sp. Y9602 hypothetical protein YP_004213070.1 2561539 R 741091 CDS YP_004213071.1 322833044 10213342 2562893..2563411 1 NC_015061.1 PFAM: protein of unknown function DUF1706; KEGG: eum:p1ECUMN_0142 hypothetical protein; hypothetical protein 2563411 10213342 Rahaq_2335 Rahnella sp. Y9602 hypothetical protein YP_004213071.1 2562893 D 741091 CDS YP_004213072.1 322833045 10213343 2563467..2563685 1 NC_015061.1 KEGG: asa:ASA_1279 hypothetical protein; hypothetical protein 2563685 10213343 Rahaq_2336 Rahnella sp. Y9602 hypothetical protein YP_004213072.1 2563467 D 741091 CDS YP_004213073.1 322833046 10213344 2563934..2564176 1 NC_015061.1 KEGG: kva:Kvar_2520 hypothetical protein; hypothetical protein 2564176 10213344 Rahaq_2337 Rahnella sp. Y9602 hypothetical protein YP_004213073.1 2563934 D 741091 CDS YP_004213074.1 322833047 10213345 complement(2564485..2565201) 1 NC_015061.1 KEGG: bpy:Bphyt_0278 transcriptional regulator, MarR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; regulatory protein ArsR 2565201 10213345 Rahaq_2338 Rahnella sp. Y9602 regulatory protein ArsR YP_004213074.1 2564485 R 741091 CDS YP_004213075.1 322833048 10213346 2565284..2566693 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_0279 major facilitator superfamily MFS_1; major facilitator superfamily protein 2566693 10213346 Rahaq_2339 Rahnella sp. Y9602 major facilitator superfamily protein YP_004213075.1 2565284 D 741091 CDS YP_004213076.1 322833049 10213347 2567022..2567207 1 NC_015061.1 KEGG: ure:UREG_04406 hypothetical protein; hypothetical protein 2567207 10213347 Rahaq_2340 Rahnella sp. Y9602 hypothetical protein YP_004213076.1 2567022 D 741091 CDS YP_004213077.1 322833050 10213348 complement(2567293..2567568) 1 NC_015061.1 KEGG: cbr:CBG22624 Hypothetical protein CBG22624; hypothetical protein 2567568 10213348 Rahaq_2341 Rahnella sp. Y9602 hypothetical protein YP_004213077.1 2567293 R 741091 CDS YP_004213078.1 322833051 10213349 complement(2567643..2567786) 1 NC_015061.1 hypothetical protein 2567786 10213349 Rahaq_2342 Rahnella sp. Y9602 hypothetical protein YP_004213078.1 2567643 R 741091 CDS YP_004213079.1 322833052 10213350 2568362..2568814 1 NC_015061.1 KEGG: ebi:EbC_28530 GCN5-related N-acetyltransferase; manually curated; PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2568814 10213350 Rahaq_2343 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004213079.1 2568362 D 741091 CDS YP_004213080.1 322833053 10213351 complement(2568986..2570257) 1 NC_015061.1 KEGG: mav:MAV_2485 Tat-translocated enzyme; TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; dyp-type peroxidase family protein 2570257 10213351 Rahaq_2344 Rahnella sp. Y9602 dyp-type peroxidase family protein YP_004213080.1 2568986 R 741091 CDS YP_004213081.1 322833054 10213352 complement(2570261..2571484) 1 NC_015061.1 PFAM: Peptidase M75, Imelysin; KEGG: mpa:MAP1761c hypothetical protein; peptidase M75, Imelysin 2571484 10213352 Rahaq_2345 Rahnella sp. Y9602 peptidase M75, Imelysin YP_004213081.1 2570261 R 741091 CDS YP_004213082.1 322833055 10213353 complement(2571499..2573127) 1 NC_015061.1 PFAM: iron permease FTR1; KEGG: mpa:MAP1762c hypothetical protein; iron permease 2573127 10213353 Rahaq_2346 Rahnella sp. Y9602 iron permease YP_004213082.1 2571499 R 741091 CDS YP_004213083.1 322833056 10213354 complement(2573355..2574032) 1 NC_015061.1 PFAM: glycosyl transferase family 2; KEGG: rsk:RSKD131_0461 glycosyl transferase family protein; family 2 glycosyl transferase 2574032 10213354 Rahaq_2347 Rahnella sp. Y9602 family 2 glycosyl transferase YP_004213083.1 2573355 R 741091 CDS YP_004213084.1 322833057 10213355 complement(2574029..2574598) 1 NC_015061.1 PFAM: SNARE associated Golgi protein; KEGG: rsq:Rsph17025_3619 hypothetical protein; hypothetical protein 2574598 10213355 Rahaq_2348 Rahnella sp. Y9602 hypothetical protein YP_004213084.1 2574029 R 741091 CDS YP_004213085.1 322833058 10213356 complement(2574606..2575766) 1 NC_015061.1 KEGG: rcp:RCAP_rcc03247 ceramide glucosyltransferase; ceramide glucosyltransferase 2575766 10213356 Rahaq_2349 Rahnella sp. Y9602 ceramide glucosyltransferase YP_004213085.1 2574606 R 741091 CDS YP_004213086.1 322833059 10213357 complement(2575958..2576596) 1 NC_015061.1 TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; KEGG: spe:Spro_2767 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; PFAM: KDPG and KHG aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase 2576596 10213357 Rahaq_2350 Rahnella sp. Y9602 2-dehydro-3-deoxyphosphogluconate aldolase YP_004213086.1 2575958 R 741091 CDS YP_004213087.1 322833060 10213358 complement(2576624..2578438) 1 NC_015061.1 TIGRFAM: 6-phosphogluconate dehydratase; KEGG: spe:Spro_4499 phosphogluconate dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; 6-phosphogluconate dehydratase 2578438 10213358 Rahaq_2351 Rahnella sp. Y9602 6-phosphogluconate dehydratase YP_004213087.1 2576624 R 741091 CDS YP_004213088.1 322833061 10213360 complement(2579790..2580404) 1 NC_015061.1 TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; KEGG: spe:Spro_4497 gluconate kinase 1; PFAM: shikimate kinase; thermoresistant glucokinase family carbohydrate kinase 2580404 10213360 Rahaq_2353 Rahnella sp. Y9602 thermoresistant glucokinase family carbohydrate kinase YP_004213088.1 2579790 R 741091 CDS YP_004213089.1 322833062 10213361 2580824..2581102 1 NC_015061.1 PFAM: protein of unknown function DUF1471; KEGG: ect:ECIAI39_0350 hypothetical protein; hypothetical protein 2581102 10213361 Rahaq_2354 Rahnella sp. Y9602 hypothetical protein YP_004213089.1 2580824 D 741091 CDS YP_004213090.1 322833063 10213362 2581173..2581319 1 NC_015061.1 KEGG: spe:Spro_4478 sodium/hydrogen exchanger; hypothetical protein 2581319 10213362 Rahaq_2355 Rahnella sp. Y9602 hypothetical protein YP_004213090.1 2581173 D 741091 CDS YP_004213091.1 322833064 10213363 complement(2581367..2581798) 1 NC_015061.1 KEGG: azl:AZL_016920 hypothetical protein; hypothetical protein 2581798 10213363 Rahaq_2356 Rahnella sp. Y9602 hypothetical protein YP_004213091.1 2581367 R 741091 CDS YP_004213092.1 322833065 10213364 2582005..2582592 1 NC_015061.1 PFAM: regulatory protein TetR; KEGG: pam:PANA_4096 hypothetical protein; TetR family transcriptional regulator 2582592 10213364 Rahaq_2357 Rahnella sp. Y9602 TetR family transcriptional regulator YP_004213092.1 2582005 D 741091 CDS YP_004213093.1 322833066 10213365 2582589..2583515 1 NC_015061.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: pmr:PMI2231 transport protein; hypothetical protein 2583515 10213365 Rahaq_2358 Rahnella sp. Y9602 hypothetical protein YP_004213093.1 2582589 D 741091 CDS YP_004213094.1 322833067 10213366 complement(2583564..2584622) 1 NC_015061.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: avn:Avin_32390 zinc-containing alcohol dehydrogenase superfamily protein; molecular chaperone GroES 2584622 10213366 Rahaq_2359 Rahnella sp. Y9602 molecular chaperone GroES YP_004213094.1 2583564 R 741091 CDS YP_004213095.1 322833068 10213367 complement(2584722..2585471) 1 NC_015061.1 TIGRFAM: histidine utilization repressor; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; KEGG: ebi:EbC_14200 transcriptional regulator, histidine utilization repressor, GntR family; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 2585471 10213367 Rahaq_2360 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004213095.1 2584722 R 741091 CDS YP_004213096.1 322833069 10213368 complement(2585527..2586297) 1 NC_015061.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ara:Arad_8407 enoyl-CoA hydratase protein; Enoyl-CoA hydratase/isomerase 2586297 10213368 Rahaq_2361 Rahnella sp. Y9602 Enoyl-CoA hydratase/isomerase YP_004213096.1 2585527 R 741091 CDS YP_004213097.1 322833070 10213369 complement(2586294..2587187) 1 NC_015061.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: ara:Arad_8405 3-hydroxybutyryl-CoA dehydrogenase protein; 3-hydroxyacyl-CoA dehydrogenase 2587187 10213369 Rahaq_2362 Rahnella sp. Y9602 3-hydroxyacyl-CoA dehydrogenase YP_004213097.1 2586294 R 741091 CDS YP_004213098.1 322833071 10213370 complement(2587203..2588405) 1 NC_015061.1 KEGG: ara:Arad_8404 acyl-CoA transferases/L-carnitine dehydratase protein; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; formyl-CoA transferase 2588405 10213370 Rahaq_2363 Rahnella sp. Y9602 formyl-CoA transferase YP_004213098.1 2587203 R 741091 CDS YP_004213099.1 322833072 10213371 complement(2588402..2589946) 1 NC_015061.1 PFAM: phenylalanine/histidine ammonia-lyase; KEGG: pwa:Pecwa_4557 histidine ammonia-lyase; phenylalanine/histidine ammonia-lyase 2589946 10213371 Rahaq_2364 Rahnella sp. Y9602 phenylalanine/histidine ammonia-lyase YP_004213099.1 2588402 R 741091 CDS YP_004213100.1 322833073 10213372 complement(2589943..2590827) 1 NC_015061.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pwa:Pecwa_4556 substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein 2590827 10213372 Rahaq_2365 Rahnella sp. Y9602 glycine betaine ABC transporter substrate-binding protein YP_004213100.1 2589943 R 741091 CDS YP_004213101.1 322833074 10213373 complement(2590862..2591569) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pwa:Pecwa_4555 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2591569 10213373 Rahaq_2366 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213101.1 2590862 R 741091 CDS YP_004213102.1 322833075 10213374 complement(2591566..2592216) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pwa:Pecwa_4554 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2592216 10213374 Rahaq_2367 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213102.1 2591566 R 741091 CDS YP_004213103.1 322833076 10213375 complement(2592221..2593315) 1 NC_015061.1 KEGG: pwa:Pecwa_4553 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2593315 10213375 Rahaq_2368 Rahnella sp. Y9602 ABC transporter YP_004213103.1 2592221 R 741091 CDS YP_004213104.1 322833077 10213376 complement(2593577..2594425) 1 NC_015061.1 KEGG: cko:CKO_03040 hypothetical protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 2594425 10213376 Rahaq_2369 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004213104.1 2593577 R 741091 CDS YP_004213105.1 322833078 10213377 complement(2594589..2595356) 1 NC_015061.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: kva:Kvar_3375 phytanoyl-CoA dioxygenase; phytanoyl-CoA dioxygenase 2595356 10213377 Rahaq_2370 Rahnella sp. Y9602 phytanoyl-CoA dioxygenase YP_004213105.1 2594589 R 741091 CDS YP_004213106.1 322833079 10213378 complement(2595504..2596400) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebi:EbC_06410 transcriptional regulator, LysR-type; LysR family transcriptional regulator 2596400 10213378 Rahaq_2371 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004213106.1 2595504 R 741091 CDS YP_004213107.1 322833080 10213379 2596557..2597282 1 NC_015061.1 PFAM: Pirin domain protein; KEGG: ebi:EbC_06420 pirin domain protein; pirin 2597282 10213379 Rahaq_2372 Rahnella sp. Y9602 pirin YP_004213107.1 2596557 D 741091 CDS YP_004213108.1 322833081 10213380 2597743..2598090 1 NC_015061.1 KEGG: ddd:Dda3937_03528 regulator for maltose metabolism; Nlp family transcriptional regulator 2598090 10213380 Rahaq_2373 Rahnella sp. Y9602 Nlp family transcriptional regulator YP_004213108.1 2597743 D 741091 CDS YP_004213109.1 322833082 10213382 2598523..2599056 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: kva:Kvar_1670 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2599056 10213382 Rahaq_2375 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004213109.1 2598523 D 741091 CDS YP_004213110.1 322833083 10213383 2599345..2599905 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ara:Arad_7713 GCN5-family N-acetyltransferase; N-acetyltransferase GCN5 2599905 10213383 Rahaq_2376 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004213110.1 2599345 D 741091 CDS YP_004213111.1 322833084 10213384 2599941..2601269 1 NC_015061.1 TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; KEGG: ara:Arad_7721 nitrilotriacetate monooxygenase protein component A; Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A 2601269 10213384 Rahaq_2377 Rahnella sp. Y9602 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A YP_004213111.1 2599941 D 741091 CDS YP_004213112.1 322833085 10213385 2601266..2601997 1 NC_015061.1 KEGG: bpu:BPUM_0349 amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2601997 10213385 Rahaq_2378 Rahnella sp. Y9602 ABC transporter YP_004213112.1 2601266 D 741091 CDS YP_004213113.1 322833086 10213386 2602022..2602690 1 NC_015061.1 KEGG: ara:Arad_14101 hypothetical protein; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 2602690 10213386 Rahaq_2379 Rahnella sp. Y9602 polar amino acid ABC transporter inner membrane subunit YP_004213113.1 2602022 D 741091 CDS YP_004213114.1 322833087 10213387 2602706..2603506 1 NC_015061.1 KEGG: bsu:BSU39500 ABC transporter (binding lipoprotein); PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 2603506 10213387 Rahaq_2380 Rahnella sp. Y9602 family 3 extracellular solute-binding protein YP_004213114.1 2602706 D 741091 CDS YP_004213115.1 322833088 10213388 2603681..2605930 1 NC_015061.1 KEGG: bth:BT_2578 hypothetical protein; hypothetical protein 2605930 10213388 Rahaq_2381 Rahnella sp. Y9602 hypothetical protein YP_004213115.1 2603681 D 741091 CDS YP_004213116.1 322833089 10213389 complement(2606021..2606707) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eta:ETA_04780 GltK protein; binding-protein-dependent transport system inner membrane protein 2606707 10213389 Rahaq_2382 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213116.1 2606021 R 741091 CDS YP_004213117.1 322833090 10213390 complement(2606697..2607470) 1 NC_015061.1 KEGG: eta:ETA_04770 GltJ protein; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 2607470 10213390 Rahaq_2383 Rahnella sp. Y9602 polar amino acid ABC transporter inner membrane subunit YP_004213117.1 2606697 R 741091 CDS YP_004213118.1 322833091 10213391 complement(2607467..2608297) 1 NC_015061.1 KEGG: eta:ETA_04760 GltL protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2608297 10213391 Rahaq_2384 Rahnella sp. Y9602 ABC transporter YP_004213118.1 2607467 R 741091 CDS YP_004213119.1 322833092 10213392 complement(2608322..2609164) 1 NC_015061.1 KEGG: eta:ETA_04750 probable ABC transporter periplasmic-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; family 3 extracellular solute-binding protein 2609164 10213392 Rahaq_2385 Rahnella sp. Y9602 family 3 extracellular solute-binding protein YP_004213119.1 2608322 R 741091 CDS YP_004213120.1 322833093 10213393 complement(2609494..2610381) 1 NC_015061.1 KEGG: eta:ETA_17170 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; uroporphyrin-III C-methyltransferase 2610381 10213393 Rahaq_2386 Rahnella sp. Y9602 uroporphyrin-III C-methyltransferase YP_004213120.1 2609494 R 741091 CDS YP_004213121.1 322833094 10213394 complement(2610378..2613050) 1 NC_015061.1 PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: eta:ETA_17180 nitrate reductase; molybdopterin oxidoreductase 2613050 10213394 Rahaq_2387 Rahnella sp. Y9602 molybdopterin oxidoreductase YP_004213121.1 2610378 R 741091 CDS YP_004213122.1 322833095 10213395 complement(2613047..2617222) 1 NC_015061.1 KEGG: eta:ETA_17190 nitrite reductase [NAD(P)H] large subunit; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; nitrite reductase [NAD(P)H], small subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite reductase (NAD(P)H) large subunit 2617222 10213395 Rahaq_2388 Rahnella sp. Y9602 nitrite reductase (NAD(P)H) large subunit YP_004213122.1 2613047 R 741091 CDS YP_004213123.1 322833096 10213396 complement(2617245..2618042) 1 NC_015061.1 TIGRFAM: nitrate ABC transporter ATPase subunits C and D; PFAM: ABC transporter related; KEGG: eta:ETA_17200 nitrate transport protein; SMART: AAA ATPase; nitrate ABC transporter ATPases C and D 2618042 10213396 Rahaq_2389 Rahnella sp. Y9602 nitrate ABC transporter ATPases C and D YP_004213123.1 2617245 R 741091 CDS YP_004213124.1 322833097 10213397 complement(2618052..2618966) 1 NC_015061.1 KEGG: eta:ETA_17210 nitrate transporter permease component; TIGRFAM: nitrate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; nitrate ABC transporter inner membrane subunit 2618966 10213397 Rahaq_2390 Rahnella sp. Y9602 nitrate ABC transporter inner membrane subunit YP_004213124.1 2618052 R 741091 CDS YP_004213125.1 322833098 10213398 complement(2618979..2620241) 1 NC_015061.1 KEGG: eta:ETA_17220 nitrate-binding protein; nitrate-binding protein 2620241 10213398 Rahaq_2391 Rahnella sp. Y9602 nitrate-binding protein YP_004213125.1 2618979 R 741091 CDS YP_004213126.1 322833099 10213399 complement(2620523..2621740) 1 NC_015061.1 PFAM: ANTAR domain protein; KEGG: eta:ETA_17230 nitrate-and nitrite-responsive positive regulator; hypothetical protein 2621740 10213399 Rahaq_2392 Rahnella sp. Y9602 hypothetical protein YP_004213126.1 2620523 R 741091 CDS YP_004213127.1 322833100 10213400 complement(2621841..2622107) 1 NC_015061.1 PFAM: protein of unknown function UPF0153; KEGG: alv:Alvin_3286 protein of unknown function UPF0153; hypothetical protein 2622107 10213400 Rahaq_2393 Rahnella sp. Y9602 hypothetical protein YP_004213127.1 2621841 R 741091 CDS YP_004213128.1 322833101 10213401 complement(2622104..2623675) 1 NC_015061.1 KEGG: seh:SeHA_C4731 hypothetical protein; hypothetical protein 2623675 10213401 Rahaq_2394 Rahnella sp. Y9602 hypothetical protein YP_004213128.1 2622104 R 741091 CDS YP_004213129.1 322833102 10213402 complement(2623743..2624837) 1 NC_015061.1 KEGG: seh:SeHA_C4730 hypothetical protein; hypothetical protein 2624837 10213402 Rahaq_2395 Rahnella sp. Y9602 hypothetical protein YP_004213129.1 2623743 R 741091 CDS YP_004213130.1 322833103 10213403 complement(2624862..2625776) 1 NC_015061.1 KEGG: enc:ECL_00748 regulatory protein, DeoR; DeoR family transcriptional regulator 2625776 10213403 Rahaq_2396 Rahnella sp. Y9602 DeoR family transcriptional regulator YP_004213130.1 2624862 R 741091 CDS YP_004213131.1 322833104 10213404 complement(2626073..2627161) 1 NC_015061.1 KEGG: enc:ECL_00707 hypothetical protein; hypothetical protein 2627161 10213404 Rahaq_2397 Rahnella sp. Y9602 hypothetical protein YP_004213131.1 2626073 R 741091 CDS YP_004213132.1 322833105 10213405 complement(2627531..2628961) 1 NC_015061.1 PFAM: glycoside hydrolase family 1; KEGG: pct:PC1_2140 cryptic 6-phospho-beta-glucosidase; glycoside hydrolase 2628961 10213405 Rahaq_2398 Rahnella sp. Y9602 glycoside hydrolase YP_004213132.1 2627531 R 741091 CDS YP_004213133.1 322833106 10213406 complement(2628982..2630454) 1 NC_015061.1 TIGRFAM: PTS system, glucose-like IIB subunint; KEGG: yen:YE1256 PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; PTS system glucose-like transporter subunit IIB 2630454 10213406 Rahaq_2399 Rahnella sp. Y9602 PTS system glucose-like transporter subunit IIB YP_004213133.1 2628982 R 741091 CDS YP_004213134.1 322833107 10213407 2630745..2631773 1 NC_015061.1 KEGG: ebi:EbC_17330 regulatory protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator 2631773 10213407 Rahaq_2400 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004213134.1 2630745 D 741091 CDS YP_004213135.1 322833108 10213408 2632199..2634283 1 NC_015061.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; KEGG: ebi:EbC_03720 sensory box protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2634283 10213408 Rahaq_2401 Rahnella sp. Y9602 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_004213135.1 2632199 D 741091 CDS YP_004213136.1 322833109 10213409 2634938..2635672 1 NC_015061.1 KEGG: ebi:EbC_45130 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 2635672 10213409 Rahaq_2402 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004213136.1 2634938 D 741091 CDS YP_004213137.1 322833110 10213410 2635665..2636687 1 NC_015061.1 TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ebi:EbC_45140 oligopeptide ABC transporter ATP-binding protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2636687 10213410 Rahaq_2403 Rahnella sp. Y9602 oligopeptide/dipeptide ABC transporter ATPase YP_004213137.1 2635665 D 741091 CDS YP_004213138.1 322833111 10213411 2636684..2637799 1 NC_015061.1 TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ent:Ent638_0752 oligopeptide/dipeptide ABC transporter ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2637799 10213411 Rahaq_2404 Rahnella sp. Y9602 oligopeptide/dipeptide ABC transporter ATPase YP_004213138.1 2636684 D 741091 CDS YP_004213139.1 322833112 10213412 2637796..2639313 1 NC_015061.1 PFAM: extracellular solute-binding protein family 5; KEGG: ebi:EbC_45160 oligopeptide ABC transporter oligopeptide-binding protein; family 5 extracellular solute-binding protein 2639313 10213412 Rahaq_2405 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004213139.1 2637796 D 741091 CDS YP_004213140.1 322833113 10213413 2639331..2640275 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_45170 oligopeptide ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 2640275 10213413 Rahaq_2406 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213140.1 2639331 D 741091 CDS YP_004213141.1 322833114 10213414 2640277..2641152 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_45180 oligopeptide ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 2641152 10213414 Rahaq_2407 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213141.1 2640277 D 741091 CDS YP_004213142.1 322833115 10213415 2641183..2642790 1 NC_015061.1 KEGG: ebi:EbC_45190 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 2642790 10213415 Rahaq_2408 Rahnella sp. Y9602 gamma-glutamyltransferase YP_004213142.1 2641183 D 741091 CDS YP_004213143.1 322833116 10213416 2643094..2644008 1 NC_015061.1 PFAM: dihydrodipicolinate synthetase; KEGG: set:SEN3356 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 2644008 10213416 Rahaq_2409 Rahnella sp. Y9602 dihydrodipicolinate synthetase YP_004213143.1 2643094 D 741091 CDS YP_004213144.1 322833117 10213417 2644141..2644905 1 NC_015061.1 KEGG: pmy:Pmen_2861 ferric iron reductase; hypothetical protein 2644905 10213417 Rahaq_2410 Rahnella sp. Y9602 hypothetical protein YP_004213144.1 2644141 D 741091 CDS YP_004213145.1 322833118 10213418 2645011..2645349 1 NC_015061.1 KEGG: sil:SPO0591 TRAP dicarboxylate transporter, DctP subunit; hypothetical protein 2645349 10213418 Rahaq_2411 Rahnella sp. Y9602 hypothetical protein YP_004213145.1 2645011 D 741091 CDS YP_004213146.1 322833119 10213419 2645542..2646861 1 NC_015061.1 KEGG: spe:Spro_2084 major facilitator transporter; major facilitator superfamily transporter 2646861 10213419 Rahaq_2412 Rahnella sp. Y9602 major facilitator superfamily transporter YP_004213146.1 2645542 D 741091 CDS YP_004213147.1 322833120 10213420 2646864..2647718 1 NC_015061.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: rer:RER_12170 RpiR family transcriptional regulator; RpiR family transcriptional regulator 2647718 10213420 Rahaq_2413 Rahnella sp. Y9602 RpiR family transcriptional regulator YP_004213147.1 2646864 D 741091 CDS YP_004213148.1 322833121 10213421 2647783..2648871 1 NC_015061.1 KEGG: dda:Dd703_2634 iron-containing alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase; glycerol dehydrogenase 2648871 10213421 Rahaq_2414 Rahnella sp. Y9602 glycerol dehydrogenase YP_004213148.1 2647783 D 741091 CDS YP_004213149.1 322833122 10213422 complement(2649454..2650569) 1 NC_015061.1 PFAM: creatinase; peptidase M24; KEGG: dda:Dd703_0948 peptidase M24; creatinase 2650569 10213422 Rahaq_2415 Rahnella sp. Y9602 creatinase YP_004213149.1 2649454 R 741091 CDS YP_004213150.1 322833123 10213423 complement(2650587..2651810) 1 NC_015061.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: ddc:Dd586_3215 peptidase M20; peptidase M20 2651810 10213423 Rahaq_2416 Rahnella sp. Y9602 peptidase M20 YP_004213150.1 2650587 R 741091 CDS YP_004213151.1 322833124 10213424 complement(2651828..2653462) 1 NC_015061.1 KEGG: ddc:Dd586_3214 ABC transporter; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter 2653462 10213424 Rahaq_2417 Rahnella sp. Y9602 ABC transporter YP_004213151.1 2651828 R 741091 CDS YP_004213152.1 322833125 10213425 complement(2653462..2654289) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddd:Dda3937_03186 ABC transporter permease; binding-protein-dependent transport system inner membrane protein 2654289 10213425 Rahaq_2418 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213152.1 2653462 R 741091 CDS YP_004213153.1 322833126 10213426 complement(2654282..2655229) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddd:Dda3937_03185 ABC transporter inner membrane protein; binding-protein-dependent transport system inner membrane protein 2655229 10213426 Rahaq_2419 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213153.1 2654282 R 741091 CDS YP_004213154.1 322833127 10213427 complement(2655245..2656840) 1 NC_015061.1 PFAM: extracellular solute-binding protein family 5; KEGG: dda:Dd703_0953 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein 2656840 10213427 Rahaq_2420 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004213154.1 2655245 R 741091 CDS YP_004213155.1 322833128 10213428 complement(2656843..2658159) 1 NC_015061.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: dda:Dd703_0954 peptidase dimerisation domain protein; peptidase M20 2658159 10213428 Rahaq_2421 Rahnella sp. Y9602 peptidase M20 YP_004213155.1 2656843 R 741091 CDS YP_004213156.1 322833129 10213429 2658237..2659010 1 NC_015061.1 KEGG: dda:Dd703_0955 transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 2659010 10213429 Rahaq_2422 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004213156.1 2658237 D 741091 CDS YP_004213157.1 322833130 10213430 complement(2659593..2660492) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pct:PC1_4115 transcriptional regulator, LysR family; LysR family transcriptional regulator 2660492 10213430 Rahaq_2423 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004213157.1 2659593 R 741091 CDS YP_004213158.1 322833131 10213431 complement(2660500..2661321) 1 NC_015061.1 PFAM: peptidase M55 D-aminopeptidase; KEGG: dze:Dd1591_3975 peptidase M55 D-aminopeptidase; peptidase M55 D-aminopeptidase 2661321 10213431 Rahaq_2424 Rahnella sp. Y9602 peptidase M55 D-aminopeptidase YP_004213158.1 2660500 R 741091 CDS YP_004213159.1 322833132 10213432 complement(2661412..2662476) 1 NC_015061.1 PFAM: peptidase S58 DmpA; KEGG: ddd:Dda3937_03248 D-aminopeptidease; peptidase S58 DmpA 2662476 10213432 Rahaq_2425 Rahnella sp. Y9602 peptidase S58 DmpA YP_004213159.1 2661412 R 741091 CDS YP_004213160.1 322833133 10213433 complement(2662507..2663418) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dda:Dd703_0144 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2663418 10213433 Rahaq_2426 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213160.1 2662507 R 741091 CDS YP_004213161.1 322833134 10213434 complement(2663428..2664348) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebi:EbC_43570 oligopeptide/dipeptide ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 2664348 10213434 Rahaq_2427 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213161.1 2663428 R 741091 CDS YP_004213162.1 322833135 10213435 complement(2664491..2666035) 1 NC_015061.1 PFAM: extracellular solute-binding protein family 5; KEGG: dda:Dd703_0146 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein 2666035 10213435 Rahaq_2428 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004213162.1 2664491 R 741091 CDS YP_004213163.1 322833136 10213436 complement(2666072..2667940) 1 NC_015061.1 KEGG: ebi:EbC_43590 oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter 2667940 10213436 Rahaq_2429 Rahnella sp. Y9602 ABC transporter YP_004213163.1 2666072 R 741091 CDS YP_004213164.1 322833137 10213437 complement(2667971..2668936) 1 NC_015061.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pam:PANA_4041 YcjG; mandelate racemase/muconate lactonizing protein 2668936 10213437 Rahaq_2430 Rahnella sp. Y9602 mandelate racemase/muconate lactonizing protein YP_004213164.1 2667971 R 741091 CDS YP_004213165.1 322833138 10213438 complement(2668936..2669946) 1 NC_015061.1 PFAM: protein of unknown function DUF1611; KEGG: pam:PANA_4040 hypothetical protein; hypothetical protein 2669946 10213438 Rahaq_2431 Rahnella sp. Y9602 hypothetical protein YP_004213165.1 2668936 R 741091 CDS YP_004213166.1 322833139 10213439 complement(2670232..2671311) 1 NC_015061.1 PFAM: porin Gram-negative type; KEGG: spe:Spro_2839 porin; porin 2671311 10213439 Rahaq_2432 Rahnella sp. Y9602 porin YP_004213166.1 2670232 R 741091 CDS YP_004213167.1 322833140 10213440 2671874..2672029 1 NC_015061.1 hypothetical protein 2672029 10213440 Rahaq_2433 Rahnella sp. Y9602 hypothetical protein YP_004213167.1 2671874 D 741091 CDS YP_004213168.1 322833141 10213441 complement(2672084..2673796) 1 NC_015061.1 KEGG: yen:YE1748 ABC transporter ATP-binding protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter 2673796 10213441 Rahaq_2434 Rahnella sp. Y9602 ABC transporter YP_004213168.1 2672084 R 741091 CDS YP_004213169.1 322833142 10213442 complement(2673902..2674207) 1 NC_015061.1 KEGG: gtn:GTNG_2814 prophage LambdaBa01, membrane protein; hypothetical protein 2674207 10213442 Rahaq_2435 Rahnella sp. Y9602 hypothetical protein YP_004213169.1 2673902 R 741091 CDS YP_004213170.1 322833143 10213443 complement(2674222..2674782) 1 NC_015061.1 KEGG: mno:Mnod_2480 peptidase C14 caspase catalytic subunit P20; hypothetical protein 2674782 10213443 Rahaq_2436 Rahnella sp. Y9602 hypothetical protein YP_004213170.1 2674222 R 741091 CDS YP_004213171.1 322833144 10213444 complement(2675012..2675875) 1 NC_015061.1 PFAM: aminotransferase class IV; KEGG: tau:Tola_0563 aminotransferase class IV; class IV aminotransferase 2675875 10213444 Rahaq_2437 Rahnella sp. Y9602 class IV aminotransferase YP_004213171.1 2675012 R 741091 CDS YP_004213172.1 322833145 10213445 complement(2676045..2676284) 1 NC_015061.1 KEGG: ebi:EbC_09020 major facilitator superfamily transporter; hypothetical protein 2676284 10213445 Rahaq_2438 Rahnella sp. Y9602 hypothetical protein YP_004213172.1 2676045 R 741091 CDS YP_004213173.1 322833146 10213446 complement(2676381..2677061) 1 NC_015061.1 TIGRFAM: respiratory nitrate reductase, subunit gamma; KEGG: spe:Spro_2880 respiratory nitrate reductase, subunit gamma; PFAM: Nitrate reductase subunit gamma; respiratory nitrate reductase subunit gamma 2677061 10213446 Rahaq_2439 Rahnella sp. Y9602 respiratory nitrate reductase subunit gamma YP_004213173.1 2676381 R 741091 CDS YP_004213174.1 322833147 10213447 complement(2677058..2677780) 1 NC_015061.1 TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; KEGG: pct:PC1_2257 nitrate reductase molybdenum cofactor assembly chaperone; PFAM: TorD-like chaperone; nitrate reductase molybdenum cofactor assembly chaperone 2677780 10213447 Rahaq_2440 Rahnella sp. Y9602 nitrate reductase molybdenum cofactor assembly chaperone YP_004213174.1 2677058 R 741091 CDS YP_004213175.1 322833148 10213448 complement(2677780..2679315) 1 NC_015061.1 TIGRFAM: nitrate reductase, subunit beta; KEGG: ebi:EbC_35040 nitrate reductase 1 beta chain; nitrate reductase, subunit beta 2679315 10213448 Rahaq_2441 Rahnella sp. Y9602 nitrate reductase, subunit beta YP_004213175.1 2677780 R 741091 CDS YP_004213176.1 322833149 10213449 complement(2679312..2683076) 1 NC_015061.1 TIGRFAM: nitrate reductase, subunit alpha; KEGG: pwa:Pecwa_2564 nitrate reductase, subunit alpha; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; nitrate reductase subunit alpha 2683076 10213449 Rahaq_2442 Rahnella sp. Y9602 nitrate reductase subunit alpha YP_004213176.1 2679312 R 741091 CDS YP_004213177.1 322833150 10213450 2683462..2684481 1 NC_015061.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: spe:Spro_2558 Mg2 transporter protein CorA family protein; Mg2 transporter protein CorA family protein 2684481 10213450 Rahaq_2443 Rahnella sp. Y9602 Mg2 transporter protein CorA family protein YP_004213177.1 2683462 D 741091 CDS YP_004213178.1 322833151 10213451 complement(2684503..2686206) 1 NC_015061.1 PFAM: Cl- channel voltage-gated family protein; CBS domain containing protein; KEGG: eta:ETA_29020 Cl-channel, voltage gated; Cl- channel voltage-gated family protein 2686206 10213451 Rahaq_2444 Rahnella sp. Y9602 Cl- channel voltage-gated family protein YP_004213178.1 2684503 R 741091 CDS YP_004213179.1 322833152 10213452 complement(2686213..2686446) 1 NC_015061.1 KEGG: ebi:EbC_28780 conserved uncharacterized protein; hypothetical protein 2686446 10213452 Rahaq_2445 Rahnella sp. Y9602 hypothetical protein YP_004213179.1 2686213 R 741091 CDS YP_004213180.1 322833153 10213453 2686620..2686934 1 NC_015061.1 PFAM: plasmid maintenance system killer; KEGG: pct:PC1_3184 plasmid maintenance system killer; plasmid maintenance system killer protein 2686934 10213453 Rahaq_2446 Rahnella sp. Y9602 plasmid maintenance system killer protein YP_004213180.1 2686620 D 741091 CDS YP_004213181.1 322833154 10213454 2686988..2687305 1 NC_015061.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: pct:PC1_3183 XRE family plasmid maintenance system antidote protein; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 2687305 10213454 Rahaq_2447 Rahnella sp. Y9602 XRE family transcriptional regulator YP_004213181.1 2686988 D 741091 CDS YP_004213182.1 322833155 10213455 complement(2687420..2688997) 1 NC_015061.1 PFAM: extracellular solute-binding protein family 5; KEGG: spe:Spro_2911 extracellular solute-binding protein; family 5 extracellular solute-binding protein 2688997 10213455 Rahaq_2448 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004213182.1 2687420 R 741091 CDS YP_004213183.1 322833156 10213456 complement(2689140..2689817) 1 NC_015061.1 KEGG: spe:Spro_2912 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2689817 10213456 Rahaq_2449 Rahnella sp. Y9602 ABC transporter YP_004213183.1 2689140 R 741091 CDS YP_004213184.1 322833157 10213457 complement(2689810..2690694) 1 NC_015061.1 KEGG: spe:Spro_2913 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2690694 10213457 Rahaq_2450 Rahnella sp. Y9602 ABC transporter YP_004213184.1 2689810 R 741091 CDS YP_004213185.1 322833158 10213458 complement(2690684..2691562) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2914 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2691562 10213458 Rahaq_2451 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213185.1 2690684 R 741091 CDS YP_004213186.1 322833159 10213459 complement(2691568..2692620) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2915 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2692620 10213459 Rahaq_2452 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213186.1 2691568 R 741091 CDS YP_004213187.1 322833160 10213460 complement(2692620..2694188) 1 NC_015061.1 PFAM: extracellular solute-binding protein family 5; KEGG: spe:Spro_2916 4-phytase; family 5 extracellular solute-binding protein 2694188 10213460 Rahaq_2453 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004213187.1 2692620 R 741091 CDS YP_004213188.1 322833161 10213461 complement(2694473..2695162) 1 NC_015061.1 PFAM: ChaC family protein; KEGG: spe:Spro_2918 ChaC family protein; ChaC family protein 2695162 10213461 Rahaq_2454 Rahnella sp. Y9602 ChaC family protein YP_004213188.1 2694473 R 741091 CDS YP_004213189.1 322833162 10213462 complement(2695512..2695745) 1 NC_015061.1 PFAM: ChaB family protein; KEGG: ctu:Ctu_24170 cation transport regulator; ChaB family protein 2695745 10213462 Rahaq_2455 Rahnella sp. Y9602 ChaB family protein YP_004213189.1 2695512 R 741091 CDS YP_004213190.1 322833163 10213463 2696217..2697317 1 NC_015061.1 KEGG: spe:Spro_2920 calcium/sodium:proton antiporter; TIGRFAM: calcium/proton exchanger; PFAM: sodium/calcium exchanger membrane region; calcium/proton exchanger 2697317 10213463 Rahaq_2456 Rahnella sp. Y9602 calcium/proton exchanger YP_004213190.1 2696217 D 741091 CDS YP_004213191.1 322833164 10213464 complement(2697434..2698222) 1 NC_015061.1 PFAM: PhoH family protein; KEGG: ypb:YPTS_2005 hypothetical protein; PhoH family protein 2698222 10213464 Rahaq_2457 Rahnella sp. Y9602 PhoH family protein YP_004213191.1 2697434 R 741091 CDS YP_004213192.1 322833165 10213465 complement(2698286..2698729) 1 NC_015061.1 KEGG: tet:TTHERM_00666900 hypothetical protein; hypothetical protein 2698729 10213465 Rahaq_2458 Rahnella sp. Y9602 hypothetical protein YP_004213192.1 2698286 R 741091 CDS YP_004213193.1 322833166 10213466 complement(2698883..2700031) 1 NC_015061.1 KEGG: spe:Spro_3463 N-acetylmuramoyl-L-alanine amidase I; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; cell wall hydrolase/autolysin 2700031 10213466 Rahaq_2459 Rahnella sp. Y9602 cell wall hydrolase/autolysin YP_004213193.1 2698883 R 741091 CDS YP_004213194.1 322833167 10213467 complement(2700202..2701497) 1 NC_015061.1 KEGG: ebi:EbC_26230 heme-binding periplasmic protein involved in iron transport; TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; dyp-type peroxidase family protein 2701497 10213467 Rahaq_2460 Rahnella sp. Y9602 dyp-type peroxidase family protein YP_004213194.1 2700202 R 741091 CDS YP_004213195.1 322833168 10213468 complement(2701653..2702780) 1 NC_015061.1 PFAM: Peptidase M75, Imelysin; KEGG: spe:Spro_2928 hypothetical protein; peptidase M75, Imelysin 2702780 10213468 Rahaq_2461 Rahnella sp. Y9602 peptidase M75, Imelysin YP_004213195.1 2701653 R 741091 CDS YP_004213196.1 322833169 10213469 complement(2702825..2703676) 1 NC_015061.1 PFAM: iron permease FTR1; KEGG: spe:Spro_2929 iron permease FTR1; iron permease 2703676 10213469 Rahaq_2462 Rahnella sp. Y9602 iron permease YP_004213196.1 2702825 R 741091 CDS YP_004213197.1 322833170 10213470 complement(2703924..2705408) 1 NC_015061.1 KEGG: spe:Spro_2930 sodium/proline symporter; TIGRFAM: sodium/proline symporter; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; sodium/proline symporter 2705408 10213470 Rahaq_2463 Rahnella sp. Y9602 sodium/proline symporter YP_004213197.1 2703924 R 741091 CDS YP_004213198.1 322833171 10213471 2705919..2709893 1 NC_015061.1 KEGG: spe:Spro_2931 trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Proline dehydrogenase; Aldehyde Dehydrogenase; delta-1-pyrroline-5-carboxylate dehydrogenase 2709893 10213471 Rahaq_2464 Rahnella sp. Y9602 delta-1-pyrroline-5-carboxylate dehydrogenase YP_004213198.1 2705919 D 741091 CDS YP_004213199.1 322833172 10213472 complement(2710293..2711045) 1 NC_015061.1 KEGG: spe:Spro_2934 amino-acid ABC transporter ATP-binding protein YecC; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter 2711045 10213472 Rahaq_2465 Rahnella sp. Y9602 ABC transporter YP_004213199.1 2710293 R 741091 CDS YP_004213200.1 322833173 10213473 complement(2711042..2711710) 1 NC_015061.1 KEGG: ebi:EbC_26310 L-cystine ABC transporter permease protein; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 2711710 10213473 Rahaq_2466 Rahnella sp. Y9602 polar amino acid ABC transporter inner membrane subunit YP_004213200.1 2711042 R 741091 CDS YP_004213201.1 322833174 10213474 complement(2711781..2712581) 1 NC_015061.1 KEGG: spe:Spro_2936 cystine transporter subunit; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; family 3 extracellular solute-binding protein 2712581 10213474 Rahaq_2467 Rahnella sp. Y9602 family 3 extracellular solute-binding protein YP_004213201.1 2711781 R 741091 CDS YP_004213202.1 322833175 10213475 complement(2712717..2713727) 1 NC_015061.1 KEGG: ypz:YPZ3_1882 D-cysteine desulfhydrase; TIGRFAM: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; PFAM: Pyridoxal-5'-phosphate-dependent protein subunit beta; D-cysteine desulfhydrase 2713727 10213475 Rahaq_2468 Rahnella sp. Y9602 D-cysteine desulfhydrase YP_004213202.1 2712717 R 741091 CDS YP_004213203.1 322833176 10213476 complement(2713916..2714422) 1 NC_015061.1 KEGG: spe:Spro_2938 flagella biosynthesis protein FliZ; flagella biosynthesis protein FliZ 2714422 10213476 Rahaq_2469 Rahnella sp. Y9602 flagella biosynthesis protein FliZ YP_004213203.1 2713916 R 741091 CDS YP_004213204.1 322833177 10213477 complement(2714477..2715199) 1 NC_015061.1 KEGG: spe:Spro_2939 flagellar biosynthesis sigma factor; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; RNA polymerase sigma 28 subunit FliA/WhiG 2715199 10213477 Rahaq_2470 Rahnella sp. Y9602 RNA polymerase sigma 28 subunit FliA/WhiG YP_004213204.1 2714477 R 741091 CDS YP_004213205.1 322833178 10213478 complement(2715507..2716787) 1 NC_015061.1 PFAM: flagellin domain protein; KEGG: ebi:EbC_26380 flagellin; flagellin domain-containing protein 2716787 10213478 Rahaq_2471 Rahnella sp. Y9602 flagellin domain-containing protein YP_004213205.1 2715507 R 741091 CDS YP_004213206.1 322833179 10213479 2717163..2718599 1 NC_015061.1 PFAM: flagellar hook-associated 2 domain-containing protein; flagellar hook-associated protein 2 domain-containing protein; flagellin hook IN repeat protein; KEGG: ebi:EbC_26390 flagellar hook-associated protein 2; flagellar hook-associated 2 domain-containing protein 2718599 10213479 Rahaq_2472 Rahnella sp. Y9602 flagellar hook-associated 2 domain-containing protein YP_004213206.1 2717163 D 741091 CDS YP_004213207.1 322833180 10213480 2718614..2719051 1 NC_015061.1 KEGG: spe:Spro_2942 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; flagellar protein FliS 2719051 10213480 Rahaq_2473 Rahnella sp. Y9602 flagellar protein FliS YP_004213207.1 2718614 D 741091 CDS YP_004213208.1 322833181 10213481 2719026..2719388 1 NC_015061.1 PFAM: flagellar export chaperone; KEGG: yen:YE2526 flagellar biosynthesis protein FliT; flagellar export chaperone 2719388 10213481 Rahaq_2474 Rahnella sp. Y9602 flagellar export chaperone YP_004213208.1 2719026 D 741091 CDS YP_004213209.1 322833182 10213482 2719601..2720455 1 NC_015061.1 KEGG: spe:Spro_2944 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 2720455 10213482 Rahaq_2475 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004213209.1 2719601 D 741091 CDS YP_004213210.1 322833183 10213483 2720574..2720750 1 NC_015061.1 PFAM: Protein of unknown function DUF2566; KEGG: spe:Spro_2735 hypothetical protein; hypothetical protein 2720750 10213483 Rahaq_2476 Rahnella sp. Y9602 hypothetical protein YP_004213210.1 2720574 D 741091 CDS YP_004213211.1 322833184 10213484 complement(2720845..2721003) 1 NC_015061.1 PFAM: protein of unknown function UPF0057; KEGG: ent:Ent638_3147 hypothetical protein; hypothetical protein 2721003 10213484 Rahaq_2477 Rahnella sp. Y9602 hypothetical protein YP_004213211.1 2720845 R 741091 CDS YP_004213212.1 322833185 10213485 complement(2721074..2721328) 1 NC_015061.1 KEGG: fbc:FB2170_06295 hypothetical protein; hypothetical protein 2721328 10213485 Rahaq_2478 Rahnella sp. Y9602 hypothetical protein YP_004213212.1 2721074 R 741091 CDS YP_004213213.1 322833186 10213486 2721370..2721891 1 NC_015061.1 KEGG: esa:ESA_01819 hypothetical protein; hypothetical protein 2721891 10213486 Rahaq_2479 Rahnella sp. Y9602 hypothetical protein YP_004213213.1 2721370 D 741091 CDS YP_004213214.1 322833187 10213487 2722125..2722400 1 NC_015061.1 KEGG: rba:RB4784 arylsulfatase A precursor; hypothetical protein 2722400 10213487 Rahaq_2480 Rahnella sp. Y9602 hypothetical protein YP_004213214.1 2722125 D 741091 CDS YP_004213215.1 322833188 10213488 complement(2722470..2722739) 1 NC_015061.1 KEGG: bcv:Bcav_1971 malto-oligosyltrehalose trehalohydrolase; hypothetical protein 2722739 10213488 Rahaq_2481 Rahnella sp. Y9602 hypothetical protein YP_004213215.1 2722470 R 741091 CDS YP_004213216.1 322833189 10213489 2722898..2723098 1 NC_015061.1 hypothetical protein 2723098 10213489 Rahaq_2482 Rahnella sp. Y9602 hypothetical protein YP_004213216.1 2722898 D 741091 CDS YP_004213217.1 322833190 10213490 complement(2723164..2723337) 1 NC_015061.1 hypothetical protein 2723337 10213490 Rahaq_2483 Rahnella sp. Y9602 hypothetical protein YP_004213217.1 2723164 R 741091 CDS YP_004213218.1 322833191 10213491 2723668..2724132 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sgl:SG1900 acetyltransferase; N-acetyltransferase GCN5 2724132 10213491 Rahaq_2484 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004213218.1 2723668 D 741091 CDS YP_004213219.1 322833192 10213492 complement(2724213..2724452) 1 NC_015061.1 KEGG: ebi:EbC_30240 conserved uncharacterized protein; hypothetical protein 2724452 10213492 Rahaq_2485 Rahnella sp. Y9602 hypothetical protein YP_004213219.1 2724213 R 741091 CDS YP_004213220.1 322833193 10213493 complement(2724597..2725502) 1 NC_015061.1 manually curated; KEGG: eta:ETA_18610 hypothetical protein; hypothetical protein 2725502 10213493 Rahaq_2486 Rahnella sp. Y9602 hypothetical protein YP_004213220.1 2724597 R 741091 CDS YP_004213221.1 322833194 10213494 2725506..2725751 1 NC_015061.1 manually curated; hypothetical protein 2725751 10213494 Rahaq_2487 Rahnella sp. Y9602 hypothetical protein YP_004213221.1 2725506 D 741091 CDS YP_004213222.1 322833195 10213495 complement(2726607..2726921) 1 NC_015061.1 KEGG: yen:YE2536 flagellar hook-basal body protein FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex subunit FliE 2726921 10213495 Rahaq_2488 Rahnella sp. Y9602 flagellar hook-basal body complex subunit FliE YP_004213222.1 2726607 R 741091 CDS YP_004213223.1 322833196 10213496 2727204..2728913 1 NC_015061.1 KEGG: spe:Spro_2947 flagellar MS-ring protein; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; flagellar M-ring protein FliF 2728913 10213496 Rahaq_2489 Rahnella sp. Y9602 flagellar M-ring protein FliF YP_004213223.1 2727204 D 741091 CDS YP_004213224.1 322833197 10213497 2728910..2729902 1 NC_015061.1 KEGG: spe:Spro_2948 flagellar motor switch protein G; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; flagellar motor switch protein FliG 2729902 10213497 Rahaq_2490 Rahnella sp. Y9602 flagellar motor switch protein FliG YP_004213224.1 2728910 D 741091 CDS YP_004213225.1 322833198 10213498 2729895..2730680 1 NC_015061.1 PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: spe:Spro_2949 flagellar assembly protein H; flagellar assembly protein FliH/type III secretion system HrpE 2730680 10213498 Rahaq_2491 Rahnella sp. Y9602 flagellar assembly protein FliH/type III secretion system HrpE YP_004213225.1 2729895 D 741091 CDS YP_004213226.1 322833199 10213499 2730680..2732044 1 NC_015061.1 TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; KEGG: spe:Spro_2950 flagellum-specific ATP synthase; SMART: AAA ATPase; flagellar protein export ATPase FliI 2732044 10213499 Rahaq_2492 Rahnella sp. Y9602 flagellar protein export ATPase FliI YP_004213226.1 2730680 D 741091 CDS YP_004213227.1 322833200 10213500 2732066..2732512 1 NC_015061.1 KEGG: ypb:YPTS_1828 flagellar biosynthesis chaperone; TIGRFAM: flagellar export protein FliJ; PFAM: flagellar export FliJ family protein; flagellar export protein FliJ 2732512 10213500 Rahaq_2493 Rahnella sp. Y9602 flagellar export protein FliJ YP_004213227.1 2732066 D 741091 CDS YP_004213228.1 322833201 10213501 2732509..2733897 1 NC_015061.1 PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: ebi:EbC_26610 flagellar hook-length control protein; flagellar hook-length control protein-like protein 2733897 10213501 Rahaq_2494 Rahnella sp. Y9602 flagellar hook-length control protein-like protein YP_004213228.1 2732509 D 741091 CDS YP_004213229.1 322833202 10213502 2734106..2734606 1 NC_015061.1 PFAM: flagellar basal body-associated protein FliL; KEGG: spe:Spro_2953 flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL 2734606 10213502 Rahaq_2495 Rahnella sp. Y9602 flagellar basal body-associated protein FliL YP_004213229.1 2734106 D 741091 CDS YP_004213230.1 322833203 10213503 2734614..2735636 1 NC_015061.1 KEGG: yen:YE2544 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM 2735636 10213503 Rahaq_2496 Rahnella sp. Y9602 flagellar motor switch protein FliM YP_004213230.1 2734614 D 741091 CDS YP_004213231.1 322833204 10213504 2735629..2736045 1 NC_015061.1 KEGG: yen:YE2545 flagellar motor switch protein FliN; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliN 2736045 10213504 Rahaq_2497 Rahnella sp. Y9602 flagellar motor switch protein FliN YP_004213231.1 2735629 D 741091 CDS YP_004213232.1 322833205 10213505 2736045..2736482 1 NC_015061.1 TIGRFAM: flagellar biosynthetic protein FliO; KEGG: ypm:YP_1571 flagellar biosynthesis protein; flagellar biosynthetic protein FliO 2736482 10213505 Rahaq_2498 Rahnella sp. Y9602 flagellar biosynthetic protein FliO YP_004213232.1 2736045 D 741091 CDS YP_004213233.1 322833206 10213506 2736479..2737261 1 NC_015061.1 KEGG: spe:Spro_2957 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; flagellar biosynthetic protein FliP 2737261 10213506 Rahaq_2499 Rahnella sp. Y9602 flagellar biosynthetic protein FliP YP_004213233.1 2736479 D 741091 CDS YP_004213234.1 322833207 10213507 2737429..2737698 1 NC_015061.1 KEGG: ebi:EbC_26670 flagellar biosynthesis protein; TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; flagellar biosynthetic protein FliQ 2737698 10213507 Rahaq_2500 Rahnella sp. Y9602 flagellar biosynthetic protein FliQ YP_004213234.1 2737429 D 741091 CDS YP_004213235.1 322833208 10213508 2737702..2738487 1 NC_015061.1 manually curated; TIGRFAM: flagellar biosynthetic protein FliR; KEGG: yen:YE2549 flagellar biosynthesis protein FliR; PFAM: type III secretion system inner membrane R protein; flagellar biosynthetic protein FliR 2738487 10213508 Rahaq_2501 Rahnella sp. Y9602 flagellar biosynthetic protein FliR YP_004213235.1 2737702 D 741091 CDS YP_004213236.1 322833209 10213509 complement(2738493..2739623) 1 NC_015061.1 KEGG: spe:Spro_1650 23S rRNA methyluridine methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumB; PFAM: (Uracil-5)-methyltransferase; 23S rRNA (uracil-5-)-methyltransferase RumB 2739623 10213509 Rahaq_2502 Rahnella sp. Y9602 23S rRNA (uracil-5-)-methyltransferase RumB YP_004213236.1 2738493 R 741091 CDS YP_004213237.1 322833210 10213510 complement(2739708..2740154) 1 NC_015061.1 PFAM: Protein of unknown function DUF2593; KEGG: spe:Spro_1649 hypothetical protein; hypothetical protein 2740154 10213510 Rahaq_2503 Rahnella sp. Y9602 hypothetical protein YP_004213237.1 2739708 R 741091 CDS YP_004213238.1 322833211 10213511 complement(2740222..2741067) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_1648 putrescine transporter subunit membrane component of ABC superfamily; binding-protein-dependent transport system inner membrane protein 2741067 10213511 Rahaq_2504 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213238.1 2740222 R 741091 CDS YP_004213239.1 322833212 10213512 complement(2741064..2742017) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: efe:EFER_0999 putrescine transporter subunit: membrane component of ABC superfamily; binding-protein-dependent transport system inner membrane protein 2742017 10213512 Rahaq_2505 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213239.1 2741064 R 741091 CDS YP_004213240.1 322833213 10213513 complement(2742030..2743163) 1 NC_015061.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; KEGG: yen:YE1485 putrescine transporter ATP-binding subunit; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 2743163 10213513 Rahaq_2506 Rahnella sp. Y9602 spermidine/putrescine ABC transporter ATPase YP_004213240.1 2742030 R 741091 CDS YP_004213241.1 322833214 10213514 complement(2743431..2744540) 1 NC_015061.1 PFAM: extracellular solute-binding protein family 1; KEGG: yen:YE1484 putrescine transporter subunit: periplasmic-binding component of ABC superfamily; extracellular solute-binding protein 2744540 10213514 Rahaq_2507 Rahnella sp. Y9602 extracellular solute-binding protein YP_004213241.1 2743431 R 741091 CDS YP_004213242.1 322833215 10213515 complement(2744972..2745454) 1 NC_015061.1 PFAM: Sensory transduction regulator, KEGG: spe:Spro_1644 hypothetical protein; Sensory transduction regulator 2745454 10213515 Rahaq_2508 Rahnella sp. Y9602 Sensory transduction regulator YP_004213242.1 2744972 R 741091 CDS YP_004213243.1 322833216 10213516 complement(2745603..2746505) 1 NC_015061.1 KEGG: spe:Spro_1643 alpha-L-glutamate ligase; TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp; alpha-L-glutamate ligase 2746505 10213516 Rahaq_2509 Rahnella sp. Y9602 alpha-L-glutamate ligase YP_004213243.1 2745603 R 741091 CDS YP_004213244.1 322833217 10213517 complement(2746524..2747246) 1 NC_015061.1 PFAM: nitroreductase; KEGG: kpu:KP1_1845 nitroreductase A; nitroreductase 2747246 10213517 Rahaq_2510 Rahnella sp. Y9602 nitroreductase YP_004213244.1 2746524 R 741091 CDS YP_004213245.1 322833218 10213518 2747532..2747798 1 NC_015061.1 KEGG: enc:ECL_02823 glutaredoxin 1; TIGRFAM: glutaredoxin, GrxA family; PFAM: glutaredoxin; GrxA family glutaredoxin 2747798 10213518 Rahaq_2511 Rahnella sp. Y9602 GrxA family glutaredoxin YP_004213245.1 2747532 D 741091 CDS YP_004213246.1 322833219 10213519 complement(2747877..2748248) 1 NC_015061.1 KEGG: spe:Spro_1640 hypothetical protein; hypothetical protein 2748248 10213519 Rahaq_2512 Rahnella sp. Y9602 hypothetical protein YP_004213246.1 2747877 R 741091 CDS YP_004213247.1 322833220 10213520 2748572..2750254 1 NC_015061.1 KEGG: ypb:YPTS_1454 hypothetical protein; TIGRFAM: YidE/YbjL duplication; PFAM: YidE/YbjL duplication domain-containing protein; TrkA-C domain protein; hypothetical protein 2750254 10213520 Rahaq_2513 Rahnella sp. Y9602 hypothetical protein YP_004213247.1 2748572 D 741091 CDS YP_004213248.1 322833221 10213521 2750703..2750981 1 NC_015061.1 KEGG: ath:AT5G17970 disease resistance protein (TIR-NBS-LRR class); hypothetical protein 2750981 10213521 Rahaq_2514 Rahnella sp. Y9602 hypothetical protein YP_004213248.1 2750703 D 741091 CDS YP_004213249.1 322833222 10213522 2751144..2752157 1 NC_015061.1 KEGG: shl:Shal_1303 hypothetical protein; hypothetical protein 2752157 10213522 Rahaq_2515 Rahnella sp. Y9602 hypothetical protein YP_004213249.1 2751144 D 741091 CDS YP_004213250.1 322833223 10213523 complement(2752168..2752407) 1 NC_015061.1 KEGG: spo:SPBC2G2.17c beta-glucosidase Psu2 (predicted); beta-glucosidase 2752407 10213523 Rahaq_2516 Rahnella sp. Y9602 beta-glucosidase YP_004213250.1 2752168 R 741091 CDS YP_004213251.1 322833224 10213524 complement(2753004..2753369) 1 NC_015061.1 KEGG: pmx:PERMA_0932 signal transduction response regulator; hypothetical protein 2753369 10213524 Rahaq_2517 Rahnella sp. Y9602 hypothetical protein YP_004213251.1 2753004 R 741091 CDS YP_004213252.1 322833225 10213525 complement(2753506..2755161) 1 NC_015061.1 KEGG: ypb:YPTS_3565 hypothetical protein; hypothetical protein 2755161 10213525 Rahaq_2518 Rahnella sp. Y9602 hypothetical protein YP_004213252.1 2753506 R 741091 CDS YP_004213253.1 322833226 10213526 complement(2755165..2755704) 1 NC_015061.1 KEGG: ypb:YPTS_3566 hypothetical protein; hypothetical protein 2755704 10213526 Rahaq_2519 Rahnella sp. Y9602 hypothetical protein YP_004213253.1 2755165 R 741091 CDS YP_004213254.1 322833227 10213527 complement(2755679..2756401) 1 NC_015061.1 KEGG: ypb:YPTS_3567 phage gene; phage protein 2756401 10213527 Rahaq_2520 Rahnella sp. Y9602 phage protein YP_004213254.1 2755679 R 741091 CDS YP_004213255.1 322833228 10213528 complement(2756391..2756825) 1 NC_015061.1 PFAM: tail assembly chaperone gp38; KEGG: plu:plu4369 hypothetical protein; tail assembly chaperone gp38 2756825 10213528 Rahaq_2521 Rahnella sp. Y9602 tail assembly chaperone gp38 YP_004213255.1 2756391 R 741091 CDS YP_004213256.1 322833229 10213529 complement(2756838..2759531) 1 NC_015061.1 KEGG: see:SNSL254_A2918 GP19; hypothetical protein 2759531 10213529 Rahaq_2522 Rahnella sp. Y9602 hypothetical protein YP_004213256.1 2756838 R 741091 CDS YP_004213257.1 322833230 10213530 complement(2759541..2760128) 1 NC_015061.1 KEGG: eum:ECUMN_0991 hypothetical protein; hypothetical protein 2760128 10213530 Rahaq_2523 Rahnella sp. Y9602 hypothetical protein YP_004213257.1 2759541 R 741091 CDS YP_004213258.1 322833231 10213531 complement(2760121..2761305) 1 NC_015061.1 KEGG: sea:SeAg_B2785 phage protein; phage protein 2761305 10213531 Rahaq_2524 Rahnella sp. Y9602 phage protein YP_004213258.1 2760121 R 741091 CDS YP_004213259.1 322833232 10213532 complement(2761298..2761630) 1 NC_015061.1 PFAM: Protein of unknown function DUF2590; KEGG: ypb:YPTS_3572 phage gene; hypothetical protein 2761630 10213532 Rahaq_2525 Rahnella sp. Y9602 hypothetical protein YP_004213259.1 2761298 R 741091 CDS YP_004213260.1 322833233 10213533 complement(2761630..2763939) 1 NC_015061.1 KEGG: enc:ECL_02840 tail tape measure protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region; phage tail tape measure protein, TP901 family 2763939 10213533 Rahaq_2526 Rahnella sp. Y9602 phage tail tape measure protein, TP901 family YP_004213260.1 2761630 R 741091 CDS YP_004213261.1 322833234 10213534 complement(2764127..2764384) 1 NC_015061.1 KEGG: seh:SeHA_C3479 phage protein; phage protein 2764384 10213534 Rahaq_2527 Rahnella sp. Y9602 phage protein YP_004213261.1 2764127 R 741091 CDS YP_004213262.1 322833235 10213535 complement(2764505..2764879) 1 NC_015061.1 KEGG: ddd:Dda3937_02563 hypothetical protein; hypothetical protein 2764879 10213535 Rahaq_2528 Rahnella sp. Y9602 hypothetical protein YP_004213262.1 2764505 R 741091 CDS YP_004213263.1 322833236 10213536 complement(2764876..2765217) 1 NC_015061.1 KEGG: ddc:Dd586_0752 hypothetical protein; hypothetical protein 2765217 10213536 Rahaq_2529 Rahnella sp. Y9602 hypothetical protein YP_004213263.1 2764876 R 741091 CDS YP_004213264.1 322833237 10213537 complement(2765214..2765510) 1 NC_015061.1 PFAM: holin family 2; KEGG: ypb:YPTS_3577 holin family protein 2; holin family 2 2765510 10213537 Rahaq_2530 Rahnella sp. Y9602 holin family 2 YP_004213264.1 2765214 R 741091 CDS YP_004213265.1 322833238 10213538 complement(2765524..2765976) 1 NC_015061.1 PFAM: Protein of unknown function DUF2597; KEGG: enc:ECL_02845 tail tube protein; hypothetical protein 2765976 10213538 Rahaq_2531 Rahnella sp. Y9602 hypothetical protein YP_004213265.1 2765524 R 741091 CDS YP_004213266.1 322833239 10213539 complement(2765979..2767106) 1 NC_015061.1 PFAM: Protein of unknown function DUF2586; KEGG: ypb:YPTS_3579 phage gene; hypothetical protein 2767106 10213539 Rahaq_2532 Rahnella sp. Y9602 hypothetical protein YP_004213266.1 2765979 R 741091 CDS YP_004213267.1 322833240 10213540 complement(2767116..2767805) 1 NC_015061.1 KEGG: ypb:YPTS_3580 phage gene; phage protein 2767805 10213540 Rahaq_2533 Rahnella sp. Y9602 phage protein YP_004213267.1 2767116 R 741091 CDS YP_004213268.1 322833241 10213541 complement(2767802..2768308) 1 NC_015061.1 KEGG: sea:SeAg_B2795 hypothetical protein; hypothetical protein 2768308 10213541 Rahaq_2534 Rahnella sp. Y9602 hypothetical protein YP_004213268.1 2767802 R 741091 CDS YP_004213269.1 322833242 10213542 complement(2768305..2768757) 1 NC_015061.1 PFAM: head completion protein; KEGG: eum:ECUMN_0979 head completion/stabilization protein (GpL) from bacteriophage origin; head completion protein 2768757 10213542 Rahaq_2535 Rahnella sp. Y9602 head completion protein YP_004213269.1 2768305 R 741091 CDS YP_004213270.1 322833243 10213543 complement(2768851..2769042) 1 NC_015061.1 KEGG: seh:SeHA_C3489 hypothetical protein; hypothetical protein 2769042 10213543 Rahaq_2536 Rahnella sp. Y9602 hypothetical protein YP_004213270.1 2768851 R 741091 CDS YP_004213271.1 322833244 10213544 complement(2769039..2769752) 1 NC_015061.1 PFAM: small terminase subunit; KEGG: ddc:Dd586_0745 small terminase subunit; small terminase subunit 2769752 10213544 Rahaq_2537 Rahnella sp. Y9602 small terminase subunit YP_004213271.1 2769039 R 741091 CDS YP_004213272.1 322833245 10213545 complement(2769755..2770789) 1 NC_015061.1 KEGG: ddd:Dda3937_02572 hypothetical protein; TIGRFAM: phage major capsid protein, P2 family; PFAM: major capsid protein P2; phage major capsid protein, P2 family 2770789 10213545 Rahaq_2538 Rahnella sp. Y9602 phage major capsid protein, P2 family YP_004213272.1 2769755 R 741091 CDS YP_004213273.1 322833246 10213546 complement(2770856..2771695) 1 NC_015061.1 PFAM: capsid scaffolding; KEGG: ypy:YPK_0898 capsid scaffolding protein; capsid scaffolding 2771695 10213546 Rahaq_2539 Rahnella sp. Y9602 capsid scaffolding YP_004213273.1 2770856 R 741091 CDS YP_004213274.1 322833247 10213547 2771836..2773623 1 NC_015061.1 KEGG: ddd:Dda3937_02574 hypothetical protein; hypothetical protein 2773623 10213547 Rahaq_2540 Rahnella sp. Y9602 hypothetical protein YP_004213274.1 2771836 D 741091 CDS YP_004213275.1 322833248 10213548 2773620..2774651 1 NC_015061.1 KEGG: ypy:YPK_0896 PBSX family phage portal protein; TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein; phage portal protein, PBSX family 2774651 10213548 Rahaq_2541 Rahnella sp. Y9602 phage portal protein, PBSX family YP_004213275.1 2773620 D 741091 CDS YP_004213276.1 322833249 10213549 2774648..2774962 1 NC_015061.1 PFAM: transcriptional activator Ogr/delta; KEGG: eum:ECUMN_0973 hypothetical protein; transcriptional activator Ogr/delta 2774962 10213549 Rahaq_2542 Rahnella sp. Y9602 transcriptional activator Ogr/delta YP_004213276.1 2774648 D 741091 CDS YP_004213277.1 322833250 10213550 complement(2774945..2775151) 1 NC_015061.1 KEGG: enc:ECL_02856 hypothetical protein; hypothetical protein 2775151 10213550 Rahaq_2543 Rahnella sp. Y9602 hypothetical protein YP_004213277.1 2774945 R 741091 CDS YP_004213278.1 322833251 10213551 complement(2775254..2777410) 1 NC_015061.1 PFAM: replication gene A; KEGG: dda:Dd703_3837 replication gene A; replication protein A 2777410 10213551 Rahaq_2544 Rahnella sp. Y9602 replication protein A YP_004213278.1 2775254 R 741091 CDS YP_004213279.1 322833252 10213552 complement(2777411..2777671) 1 NC_015061.1 KEGG: sei:SPC_0877 hypothetical protein; hypothetical protein 2777671 10213552 Rahaq_2545 Rahnella sp. Y9602 hypothetical protein YP_004213279.1 2777411 R 741091 CDS YP_004213280.1 322833253 10213553 complement(2777745..2778173) 1 NC_015061.1 KEGG: ypb:YPTS_3591 hypothetical protein; hypothetical protein 2778173 10213553 Rahaq_2546 Rahnella sp. Y9602 hypothetical protein YP_004213280.1 2777745 R 741091 CDS YP_004213281.1 322833254 10213554 complement(2778181..2778507) 1 NC_015061.1 KEGG: ddd:Dda3937_01769 hypothetical protein; hypothetical protein 2778507 10213554 Rahaq_2547 Rahnella sp. Y9602 hypothetical protein YP_004213281.1 2778181 R 741091 CDS YP_004213282.1 322833255 10213555 complement(2778510..2778713) 1 NC_015061.1 KEGG: ypb:YPTS_3593 hypothetical protein; hypothetical protein 2778713 10213555 Rahaq_2548 Rahnella sp. Y9602 hypothetical protein YP_004213282.1 2778510 R 741091 CDS YP_004213283.1 322833256 10213556 complement(2778723..2779232) 1 NC_015061.1 KEGG: ypb:YPTS_3594 regulatory CII family protein; regulatory CII family protein 2779232 10213556 Rahaq_2549 Rahnella sp. Y9602 regulatory CII family protein YP_004213283.1 2778723 R 741091 CDS YP_004213284.1 322833257 10213557 complement(2779265..2779486) 1 NC_015061.1 KEGG: sbo:SBO_0749 hypothetical protein; hypothetical protein 2779486 10213557 Rahaq_2550 Rahnella sp. Y9602 hypothetical protein YP_004213284.1 2779265 R 741091 CDS YP_004213285.1 322833258 10213558 2779628..2780188 1 NC_015061.1 PFAM: CI repressor; KEGG: ddc:Dd586_0730 CI repressor; CI repressor 2780188 10213558 Rahaq_2551 Rahnella sp. Y9602 CI repressor YP_004213285.1 2779628 D 741091 CDS YP_004213286.1 322833259 10213559 2780197..2781120 1 NC_015061.1 KEGG: ypb:YPTS_3597 hypothetical protein; hypothetical protein 2781120 10213559 Rahaq_2552 Rahnella sp. Y9602 hypothetical protein YP_004213286.1 2780197 D 741091 CDS YP_004213287.1 322833260 10213560 2781137..2782117 1 NC_015061.1 KEGG: vvy:VV1784 hypothetical protein; hypothetical protein 2782117 10213560 Rahaq_2553 Rahnella sp. Y9602 hypothetical protein YP_004213287.1 2781137 D 741091 CDS YP_004213288.1 322833261 10213561 2782208..2783263 1 NC_015061.1 PFAM: integrase family protein; KEGG: stt:t3400 bacteriophage integrase; integrase family protein 2783263 10213561 Rahaq_2554 Rahnella sp. Y9602 integrase family protein YP_004213288.1 2782208 D 741091 CDS YP_004213289.1 322833262 10213562 complement(2783315..2783503) 1 NC_015061.1 hypothetical protein 2783503 10213562 Rahaq_2555 Rahnella sp. Y9602 hypothetical protein YP_004213289.1 2783315 R 741091 CDS YP_004213290.1 322833263 10213563 2783523..2784008 1 NC_015061.1 KEGG: ses:SARI_00912 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; type VI secretion system effector 2784008 10213563 Rahaq_2556 Rahnella sp. Y9602 type VI secretion system effector YP_004213290.1 2783523 D 741091 CDS YP_004213291.1 322833264 10213564 2784019..2784384 1 NC_015061.1 KEGG: bge:BC1002_4564 hypothetical protein; hypothetical protein 2784384 10213564 Rahaq_2557 Rahnella sp. Y9602 hypothetical protein YP_004213291.1 2784019 D 741091 CDS YP_004213292.1 322833265 10213565 2784348..2784824 1 NC_015061.1 KEGG: pay:PAU_01439 hypothetical protein; hypothetical protein 2784824 10213565 Rahaq_2558 Rahnella sp. Y9602 hypothetical protein YP_004213292.1 2784348 D 741091 CDS YP_004213293.1 322833266 10213566 complement(2784885..2785196) 1 NC_015061.1 KEGG: pwa:Pecwa_2865 hypothetical protein; hypothetical protein 2785196 10213566 Rahaq_2559 Rahnella sp. Y9602 hypothetical protein YP_004213293.1 2784885 R 741091 CDS YP_004213294.1 322833267 10213567 complement(2785282..2785647) 1 NC_015061.1 KEGG: bmj:BMULJ_05376 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 2785647 10213567 Rahaq_2560 Rahnella sp. Y9602 glyoxalase/bleomycin resistance protein/dioxygenase YP_004213294.1 2785282 R 741091 CDS YP_004213295.1 322833268 10213568 complement(2785809..2786921) 1 NC_015061.1 PFAM: porin Gram-negative type; KEGG: spe:Spro_3264 outer membrane porin protein C; porin 2786921 10213568 Rahaq_2561 Rahnella sp. Y9602 porin YP_004213295.1 2785809 R 741091 CDS YP_004213296.1 322833269 10213569 complement(2787364..2787651) 1 NC_015061.1 KEGG: zma:100383431 hypothetical protein LOC100383431; hypothetical protein 2787651 10213569 Rahaq_2562 Rahnella sp. Y9602 hypothetical protein YP_004213296.1 2787364 R 741091 CDS YP_004213297.1 322833270 10213570 complement(2787644..2788159) 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_1428 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2788159 10213570 Rahaq_2563 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004213297.1 2787644 R 741091 CDS YP_004213298.1 322833271 10213571 2788429..2789034 1 NC_015061.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: spe:Spro_1634 undecaprenyl pyrophosphate phosphatase; SMART: phosphoesterase PA-phosphatase related; undecaprenyl-diphosphatase 2789034 10213571 Rahaq_2564 Rahnella sp. Y9602 undecaprenyl-diphosphatase YP_004213298.1 2788429 D 741091 CDS YP_004213299.1 322833272 10213572 complement(2789106..2790317) 1 NC_015061.1 KEGG: spe:Spro_1628 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; Beta-lactamase 2790317 10213572 Rahaq_2565 Rahnella sp. Y9602 Beta-lactamase YP_004213299.1 2789106 R 741091 CDS YP_004213300.1 322833273 10213573 2790626..2790967 1 NC_015061.1 PFAM: GlpM family protein; KEGG: ebi:EbC_15730 GlpM family protein; GlpM family protein 2790967 10213573 Rahaq_2566 Rahnella sp. Y9602 GlpM family protein YP_004213300.1 2790626 D 741091 CDS YP_004213301.1 322833274 10213574 2791060..2791773 1 NC_015061.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; KEGG: eta:ETA_21870 hydrolase; HAD-superfamily hydrolase 2791773 10213574 Rahaq_2567 Rahnella sp. Y9602 HAD-superfamily hydrolase YP_004213301.1 2791060 D 741091 CDS YP_004213302.1 322833275 10213575 complement(2791777..2792700) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ddd:Dda3937_01926 LysR family regulatory protein; LysR family transcriptional regulator 2792700 10213575 Rahaq_2568 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004213302.1 2791777 R 741091 CDS YP_004213303.1 322833276 10213576 2792857..2794278 1 NC_015061.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: pam:PANA_3275 CndP1; peptidase M20 2794278 10213576 Rahaq_2569 Rahnella sp. Y9602 peptidase M20 YP_004213303.1 2792857 D 741091 CDS YP_004213304.1 322833277 10213577 2794275..2795558 1 NC_015061.1 KEGG: dda:Dd703_2930 major facilitator superfamily MFS_1; major facilitator superfamily protein 2795558 10213577 Rahaq_2570 Rahnella sp. Y9602 major facilitator superfamily protein YP_004213304.1 2794275 D 741091 CDS YP_004213305.1 322833278 10213578 complement(2795625..2796776) 1 NC_015061.1 KEGG: yen:YE0966 hypothetical protein; hypothetical protein 2796776 10213578 Rahaq_2571 Rahnella sp. Y9602 hypothetical protein YP_004213305.1 2795625 R 741091 CDS YP_004213306.1 322833279 10213579 2797094..2798167 1 NC_015061.1 KEGG: esa:ESA_00809 hypothetical protein; hypothetical protein 2798167 10213579 Rahaq_2572 Rahnella sp. Y9602 hypothetical protein YP_004213306.1 2797094 D 741091 CDS YP_004213307.1 322833280 10213580 2798383..2799750 1 NC_015061.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: set:SEN3571 transporter; sugar (Glycoside-Pentoside-Hexuronide) transporter 2799750 10213580 Rahaq_2573 Rahnella sp. Y9602 sugar (Glycoside-Pentoside-Hexuronide) transporter YP_004213307.1 2798383 D 741091 CDS YP_004213308.1 322833281 10213581 2799781..2802105 1 NC_015061.1 PFAM: glycoside hydrolase family 31; KEGG: esa:ESA_04154 alpha-xylosidase YicI; glycoside hydrolase 2802105 10213581 Rahaq_2574 Rahnella sp. Y9602 glycoside hydrolase YP_004213308.1 2799781 D 741091 CDS YP_004213309.1 322833282 10213582 complement(2802174..2803361) 1 NC_015061.1 KEGG: spe:Spro_0102 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 2803361 10213582 Rahaq_2575 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004213309.1 2802174 R 741091 CDS YP_004213310.1 322833283 10213583 complement(2803543..2804742) 1 NC_015061.1 PFAM: inner-membrane translocator; KEGG: yen:YE4119 sugar transport system permease protein; inner-membrane translocator 2804742 10213583 Rahaq_2576 Rahnella sp. Y9602 inner-membrane translocator YP_004213310.1 2803543 R 741091 CDS YP_004213311.1 322833284 10213584 complement(2804735..2806276) 1 NC_015061.1 TIGRFAM: D-xylose ABC transporter ATPase subunit; PFAM: ABC transporter related; KEGG: ebi:EbC_32960 D-xylose ABC transporter ATPase subunit; SMART: AAA ATPase; D-xylose ABC transporter ATPase 2806276 10213584 Rahaq_2577 Rahnella sp. Y9602 D-xylose ABC transporter ATPase YP_004213311.1 2804735 R 741091 CDS YP_004213312.1 322833285 10213585 complement(2806342..2807337) 1 NC_015061.1 KEGG: ypb:YPTS_4107 D-xylose transporter subunit XylF; TIGRFAM: D-xylose ABC transporter periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; D-xylose ABC transporter periplasmic substrate-binding protein 2807337 10213585 Rahaq_2578 Rahnella sp. Y9602 D-xylose ABC transporter periplasmic substrate-binding protein YP_004213312.1 2806342 R 741091 CDS YP_004213313.1 322833286 10213586 2807716..2809035 1 NC_015061.1 TIGRFAM: xylose isomerase; KEGG: enc:ECL_00201 xylose isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel; xylose isomerase 2809035 10213586 Rahaq_2579 Rahnella sp. Y9602 xylose isomerase YP_004213313.1 2807716 D 741091 CDS YP_004213314.1 322833287 10213587 2809127..2810578 1 NC_015061.1 KEGG: spe:Spro_0097 xylulokinase; TIGRFAM: xylulokinase; PFAM: Carbohydrate kinase, FGGY-like; xylulokinase 2810578 10213587 Rahaq_2580 Rahnella sp. Y9602 xylulokinase YP_004213314.1 2809127 D 741091 CDS YP_004213315.1 322833288 10213588 complement(2810771..2811061) 1 NC_015061.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: spe:Spro_1383 autoinducer-2 (AI-2) modifying protein LsrG; antibiotic biosynthesis monooxygenase 2811061 10213588 Rahaq_2581 Rahnella sp. Y9602 antibiotic biosynthesis monooxygenase YP_004213315.1 2810771 R 741091 CDS YP_004213316.1 322833289 10213589 complement(2811065..2811940) 1 NC_015061.1 PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: xbo:XBJ1_4104 aldolase with ribulose-phoshate binding barrel; deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase 2811940 10213589 Rahaq_2582 Rahnella sp. Y9602 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_004213316.1 2811065 R 741091 CDS YP_004213317.1 322833290 10213590 complement(2811960..2812976) 1 NC_015061.1 KEGG: ypb:YPTS_0573 ABC transporter perplasmic sugar binding protein; sugar ABC transporter perplasmic protein 2812976 10213590 Rahaq_2583 Rahnella sp. Y9602 sugar ABC transporter perplasmic protein YP_004213317.1 2811960 R 741091 CDS YP_004213318.1 322833291 10213591 complement(2812990..2814015) 1 NC_015061.1 PFAM: inner-membrane translocator; KEGG: ypi:YpsIP31758_3523 autoinducer AI-2 ABC transporter permease protein LsrD; inner-membrane translocator 2814015 10213591 Rahaq_2584 Rahnella sp. Y9602 inner-membrane translocator YP_004213318.1 2812990 R 741091 CDS YP_004213319.1 322833292 10213592 complement(2814015..2815091) 1 NC_015061.1 PFAM: inner-membrane translocator; KEGG: ecr:ECIAI1_1526 AI2 transporter ; membrane component of ABC superfamily; inner-membrane translocator 2815091 10213592 Rahaq_2585 Rahnella sp. Y9602 inner-membrane translocator YP_004213319.1 2814015 R 741091 CDS YP_004213320.1 322833293 10213593 complement(2815085..2816647) 1 NC_015061.1 KEGG: yen:YE0528 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2816647 10213593 Rahaq_2586 Rahnella sp. Y9602 ABC transporter YP_004213320.1 2815085 R 741091 CDS YP_004213321.1 322833294 10213594 2816879..2817853 1 NC_015061.1 PFAM: sugar-binding domain-containing protein; regulatory protein Crp; KEGG: yen:YE0529 transcriptional regulatory protein; DeoR family transcriptional regulator 2817853 10213594 Rahaq_2587 Rahnella sp. Y9602 DeoR family transcriptional regulator YP_004213321.1 2816879 D 741091 CDS YP_004213322.1 322833295 10213595 2817924..2819516 1 NC_015061.1 PFAM: Carbohydrate kinase, FGGY-like; KEGG: spe:Spro_1382 autoinducer-2 (AI-2) kinase; Carbohydrate kinase, FGGY-like protein 2819516 10213595 Rahaq_2588 Rahnella sp. Y9602 Carbohydrate kinase, FGGY-like protein YP_004213322.1 2817924 D 741091 CDS YP_004213323.1 322833296 10213596 complement(2819574..2820572) 1 NC_015061.1 KEGG: dze:Dd1591_1740 2-keto-3-deoxygluconate permease; TIGRFAM: 2-keto-3-deoxygluconate transporter; PFAM: 2-keto-3-deoxygluconate permease; 2-keto-3-deoxygluconate transporter 2820572 10213596 Rahaq_2589 Rahnella sp. Y9602 2-keto-3-deoxygluconate transporter YP_004213323.1 2819574 R 741091 CDS YP_004213324.1 322833297 10213597 complement(2820832..2821497) 1 NC_015061.1 TIGRFAM: transaldolase; KEGG: yen:YE1979 fructose-6-phosphate aldolase; PFAM: Transaldolase; transaldolase 2821497 10213597 Rahaq_2590 Rahnella sp. Y9602 transaldolase YP_004213324.1 2820832 R 741091 CDS YP_004213325.1 322833298 10213598 2821645..2822544 1 NC_015061.1 TIGRFAM: glycyl-radical enzyme activating protein family; KEGG: yen:YE0645 pyruvate formate-lyase 3 activating enzyme; PFAM: Radical SAM domain protein; glycyl-radical enzyme activating protein family 2822544 10213598 Rahaq_2591 Rahnella sp. Y9602 glycyl-radical enzyme activating protein family YP_004213325.1 2821645 D 741091 CDS YP_004213326.1 322833299 10213599 2822550..2824982 1 NC_015061.1 TIGRFAM: pyruvate formate-lyase; KEGG: ecl:EcolC_2821 pyruvate formate-lyase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; pyruvate formate-lyase 2824982 10213599 Rahaq_2592 Rahnella sp. Y9602 pyruvate formate-lyase YP_004213326.1 2822550 D 741091 CDS YP_004213327.1 322833300 10213600 2825043..2825786 1 NC_015061.1 KEGG: spe:Spro_2643 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator 2825786 10213600 Rahaq_2593 Rahnella sp. Y9602 DeoR family transcriptional regulator YP_004213327.1 2825043 D 741091 CDS YP_004213328.1 322833301 10213601 complement(2825830..2826525) 1 NC_015061.1 KEGG: yen:YE1976 L-ribulose-5-phosphate 4-epimerase; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein; L-ribulose-5-phosphate 4-epimerase 2826525 10213601 Rahaq_2594 Rahnella sp. Y9602 L-ribulose-5-phosphate 4-epimerase YP_004213328.1 2825830 R 741091 CDS YP_004213329.1 322833302 10213602 2826798..2827016 1 NC_015061.1 KEGG: enc:ECL_01750 osmotically inducible lipoprotein B; osmotically inducible lipoprotein B 2827016 10213602 Rahaq_2595 Rahnella sp. Y9602 osmotically inducible lipoprotein B YP_004213329.1 2826798 D 741091 CDS YP_004213330.1 322833303 10213603 complement(2827247..2827576) 1 NC_015061.1 KEGG: efe:EFER_1672 translation initiation factor SUI1; TIGRFAM: translation initiation factor SUI1; PFAM: translation initiation factor SUI1; translation initiation factor SUI1 2827576 10213603 Rahaq_2596 Rahnella sp. Y9602 translation initiation factor SUI1 YP_004213330.1 2827247 R 741091 CDS YP_004213331.1 322833304 10213604 complement(2827589..2828317) 1 NC_015061.1 TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: set:SEN1326 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase 2828317 10213604 Rahaq_2597 Rahnella sp. Y9602 orotidine 5'-phosphate decarboxylase YP_004213331.1 2827589 R 741091 CDS YP_004213332.1 322833305 10213605 2828509..2828796 1 NC_015061.1 KEGG: spe:Spro_2649 hypothetical protein; hypothetical protein 2828796 10213605 Rahaq_2598 Rahnella sp. Y9602 hypothetical protein YP_004213332.1 2828509 D 741091 CDS YP_004213333.1 322833306 10213606 complement(2828891..2830060) 1 NC_015061.1 KEGG: yen:YE1968 tetratricopeptide repeat protein; hypothetical protein 2830060 10213606 Rahaq_2599 Rahnella sp. Y9602 hypothetical protein YP_004213333.1 2828891 R 741091 CDS YP_004213334.1 322833307 10213607 complement(2830067..2830378) 1 NC_015061.1 KEGG: spe:Spro_2651 hypothetical protein; hypothetical protein 2830378 10213607 Rahaq_2600 Rahnella sp. Y9602 hypothetical protein YP_004213334.1 2830067 R 741091 CDS YP_004213335.1 322833308 10213608 complement(2830646..2831401) 1 NC_015061.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: spe:Spro_2652 phosphatidylglycerophosphatase B; SMART: phosphoesterase PA-phosphatase related; Phosphatidylglycerophosphatase 2831401 10213608 Rahaq_2601 Rahnella sp. Y9602 Phosphatidylglycerophosphatase YP_004213335.1 2830646 R 741091 CDS YP_004213336.1 322833309 10213609 2831692..2832282 1 NC_015061.1 TIGRFAM: GTP cyclohydrolase II; KEGG: spe:Spro_2653 GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II; GTP cyclohydrolase II 2832282 10213609 Rahaq_2602 Rahnella sp. Y9602 GTP cyclohydrolase II YP_004213336.1 2831692 D 741091 CDS YP_004213337.1 322833310 10213610 complement(2832356..2835028) 1 NC_015061.1 KEGG: spe:Spro_2654 aconitate hydratase; TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain-containing protein; aconitate hydratase 1 2835028 10213610 Rahaq_2603 Rahnella sp. Y9602 aconitate hydratase 1 YP_004213337.1 2832356 R 741091 CDS YP_004213338.1 322833311 10213611 complement(2835219..2836193) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2656 transcriptional regulator CysB; LysR family transcriptional regulator 2836193 10213611 Rahaq_2604 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004213338.1 2835219 R 741091 CDS YP_004213339.1 322833312 10213612 complement(2836544..2839141) 1 NC_015061.1 SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; TIGRFAM: DNA topoisomerase I; KEGG: spe:Spro_2657 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; DNA topoisomerase type IA zn finger domain protein; DNA topoisomerase I zinc ribbon domain protein; DNA topoisomerase I 2839141 10213612 Rahaq_2605 Rahnella sp. Y9602 DNA topoisomerase I YP_004213339.1 2836544 R 741091 CDS YP_004213340.1 322833313 10213613 2839605..2839856 1 NC_015061.1 PFAM: Protein of unknown function DUF2498; KEGG: sgl:SG1407 hypothetical protein; hypothetical protein 2839856 10213613 Rahaq_2606 Rahnella sp. Y9602 hypothetical protein YP_004213340.1 2839605 D 741091 CDS YP_004213341.1 322833314 10213614 complement(2839971..2841014) 1 NC_015061.1 PFAM: Peptidase S49 domain protein; peptidase S49; KEGG: spe:Spro_2659 periplasmic protease; Peptidase S49 domain protein 2841014 10213614 Rahaq_2607 Rahnella sp. Y9602 Peptidase S49 domain protein YP_004213341.1 2839971 R 741091 CDS YP_004213342.1 322833315 10213615 2841327..2842136 1 NC_015061.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ypm:YP_2012 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2842136 10213615 Rahaq_2608 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004213342.1 2841327 D 741091 CDS YP_004213343.1 322833316 10213616 2842155..2842745 1 NC_015061.1 TIGRFAM: cob(I)alamin adenosyltransferase; KEGG: spe:Spro_2661 cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase 2842745 10213616 Rahaq_2609 Rahnella sp. Y9602 cob(I)alamin adenosyltransferase YP_004213343.1 2842155 D 741091 CDS YP_004213344.1 322833317 10213617 complement(2842762..2843805) 1 NC_015061.1 TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; KEGG: etr:ETAE_1847 nicotinate-nucleotide--dimethylbenzimidazole; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2843805 10213617 Rahaq_2610 Rahnella sp. Y9602 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_004213344.1 2842762 R 741091 CDS YP_004213345.1 322833318 10213618 complement(2843831..2844427) 1 NC_015061.1 KEGG: plu:plu2981 alpha-ribazole-5'-phosphate phosphatase; TIGRFAM: alpha-ribazole phosphatase; PFAM: Phosphoglycerate mutase; alpha-ribazole-5'-phosphate phosphatase 2844427 10213618 Rahaq_2611 Rahnella sp. Y9602 alpha-ribazole-5'-phosphate phosphatase YP_004213345.1 2843831 R 741091 CDS YP_004213346.1 322833319 10213619 complement(2844444..2845196) 1 NC_015061.1 KEGG: etr:ETAE_1546 cobalamin synthase; TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; cobalamin 5'-phosphate synthase 2845196 10213619 Rahaq_2612 Rahnella sp. Y9602 cobalamin 5'-phosphate synthase YP_004213346.1 2844444 R 741091 CDS YP_004213347.1 322833320 10213620 complement(2845222..2845776) 1 NC_015061.1 KEGG: yen:YE2710 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; PFAM: cobalbumin biosynthesis protein; adenosylcobinamide-phosphate guanylyltransferase 2845776 10213620 Rahaq_2613 Rahnella sp. Y9602 adenosylcobinamide-phosphate guanylyltransferase YP_004213347.1 2845222 R 741091 CDS YP_004213348.1 322833321 10213621 complement(2845925..2847244) 1 NC_015061.1 KEGG: spe:Spro_2662 23S rRNA pseudouridylate synthase B; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; pseudouridine synthase 2847244 10213621 Rahaq_2614 Rahnella sp. Y9602 pseudouridine synthase YP_004213348.1 2845925 R 741091 CDS YP_004213349.1 322833322 10213622 complement(2847443..2848063) 1 NC_015061.1 KEGG: ypb:YPTS_2203 hypothetical protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; Sua5/YciO/YrdC/YwlC family protein 2848063 10213622 Rahaq_2615 Rahnella sp. Y9602 Sua5/YciO/YrdC/YwlC family protein YP_004213349.1 2847443 R 741091 CDS YP_004213350.1 322833323 10213623 complement(2848098..2849021) 1 NC_015061.1 KEGG: spe:Spro_2666 phosphotransferase domain-containing protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; PHP domain-containing protein 2849021 10213623 Rahaq_2616 Rahnella sp. Y9602 PHP domain-containing protein YP_004213350.1 2848098 R 741091 CDS YP_004213351.1 322833324 10213624 2849512..2851074 1 NC_015061.1 KEGG: yen:YE2209 anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; anthranilate synthase component I 2851074 10213624 Rahaq_2617 Rahnella sp. Y9602 anthranilate synthase component I YP_004213351.1 2849512 D 741091 CDS YP_004213352.1 322833325 10213625 2851076..2851654 1 NC_015061.1 KEGG: yen:YE2210 anthranilate synthase component II; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; glutamine amidotransferase of anthranilate synthase 2851654 10213625 Rahaq_2618 Rahnella sp. Y9602 glutamine amidotransferase of anthranilate synthase YP_004213352.1 2851076 D 741091 CDS YP_004213353.1 322833326 10213626 2851666..2852679 1 NC_015061.1 TIGRFAM: anthranilate phosphoribosyltransferase; KEGG: spe:Spro_2669 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; anthranilate phosphoribosyltransferase 2852679 10213626 Rahaq_2619 Rahnella sp. Y9602 anthranilate phosphoribosyltransferase YP_004213353.1 2851666 D 741091 CDS YP_004213354.1 322833327 10213627 2852683..2854047 1 NC_015061.1 KEGG: spe:Spro_2670 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; PFAM: Indole-3-glycerol phosphate synthase; N-(5'phosphoribosyl)anthranilate isomerase (PRAI); Indole-3-glycerol-phosphate synthase., Phosphoribosylanthranilate isomerase 2854047 10213627 Rahaq_2620 Rahnella sp. Y9602 Indole-3-glycerol-phosphate synthase., Phosphoribosylanthranilate isomerase YP_004213354.1 2852683 D 741091 CDS YP_004213355.1 322833328 10213628 2854092..2855282 1 NC_015061.1 KEGG: spe:Spro_2671 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase, subunit beta; PFAM: Pyridoxal-5'-phosphate-dependent protein subunit beta; tryptophan synthase subunit beta 2855282 10213628 Rahaq_2621 Rahnella sp. Y9602 tryptophan synthase subunit beta YP_004213355.1 2854092 D 741091 CDS YP_004213356.1 322833329 10213629 2855282..2856088 1 NC_015061.1 KEGG: spe:Spro_2672 tryptophan synthase subunit alpha; TIGRFAM: tryptophan synthase, subunit alpha; PFAM: tryptophan synthase alpha chain; TspO and MBR-like proteins 2856088 10213629 Rahaq_2622 Rahnella sp. Y9602 TspO and MBR-like proteins YP_004213356.1 2855282 D 741091 CDS YP_004213357.1 322833330 10213630 2856304..2856618 1 NC_015061.1 KEGG: spe:Spro_2673 transport-associated; PFAM: transport-associated; SMART: Transport-associated and nodulation region; transport-associated protein 2856618 10213630 Rahaq_2623 Rahnella sp. Y9602 transport-associated protein YP_004213357.1 2856304 D 741091 CDS YP_004213358.1 322833331 10213631 complement(2856689..2857321) 1 NC_015061.1 PFAM: OmpW family protein; KEGG: ddd:Dda3937_00570 outer membrane protein W; OmpW family protein 2857321 10213631 Rahaq_2624 Rahnella sp. Y9602 OmpW family protein YP_004213358.1 2856689 R 741091 CDS YP_004213359.1 322833332 10213632 2857613..2857990 1 NC_015061.1 PFAM: protein of unknown function UPF0153; KEGG: yen:YE2216A hypothetical protein; hypothetical protein 2857990 10213632 Rahaq_2625 Rahnella sp. Y9602 hypothetical protein YP_004213359.1 2857613 D 741091 CDS YP_004213360.1 322833333 10213633 2858104..2858859 1 NC_015061.1 PFAM: protein of unknown function UPF0259; KEGG: spe:Spro_2675 hypothetical protein; hypothetical protein 2858859 10213633 Rahaq_2626 Rahnella sp. Y9602 hypothetical protein YP_004213360.1 2858104 D 741091 CDS YP_004213361.1 322833334 10213634 complement(2858901..2860223) 1 NC_015061.1 PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein; transposase IS4 family protein 2860223 10213634 Rahaq_2627 Rahnella sp. Y9602 transposase IS4 family protein YP_004213361.1 2858901 R 741091 CDS YP_004213362.1 322833335 10213635 2860384..2860923 1 NC_015061.1 KEGG: spe:Spro_2677 intracellular septation protein A; TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A; intracellular septation protein A 2860923 10213635 Rahaq_2628 Rahnella sp. Y9602 intracellular septation protein A YP_004213362.1 2860384 D 741091 CDS YP_004213363.1 322833336 10213636 2860997..2861437 1 NC_015061.1 PFAM: thioesterase superfamily protein; KEGG: spe:Spro_2678 acyl-CoA thioester hydrolase; thioesterase superfamily protein 2861437 10213636 Rahaq_2629 Rahnella sp. Y9602 thioesterase superfamily protein YP_004213363.1 2860997 D 741091 CDS YP_004213364.1 322833337 10213637 complement(2861539..2862270) 1 NC_015061.1 KEGG: spe:Spro_2682 transport protein TonB; TIGRFAM: TonB family protein; PFAM: TonB domain; TonB family protein 2862270 10213637 Rahaq_2630 Rahnella sp. Y9602 TonB family protein YP_004213364.1 2861539 R 741091 CDS YP_004213365.1 322833338 10213638 2862484..2862780 1 NC_015061.1 PFAM: YCII-related; KEGG: ecw:EcE24377A_1399 YciI-like protein; hypothetical protein 2862780 10213638 Rahaq_2631 Rahnella sp. Y9602 hypothetical protein YP_004213365.1 2862484 D 741091 CDS YP_004213366.1 322833339 10213639 2862944..2863234 1 NC_015061.1 KEGG: gem:GM21_2278 hypothetical protein; hypothetical protein 2863234 10213639 Rahaq_2632 Rahnella sp. Y9602 hypothetical protein YP_004213366.1 2862944 D 741091 CDS YP_004213367.1 322833340 10213640 2863351..2863512 1 NC_015061.1 KEGG: ypb:YPTS_2464 hypothetical protein; hypothetical protein 2863512 10213640 Rahaq_2633 Rahnella sp. Y9602 hypothetical protein YP_004213367.1 2863351 D 741091 CDS YP_004213368.1 322833341 10213641 2863993..2865453 1 NC_015061.1 KEGG: yen:YE2227 cardiolipin synthetase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; phospholipase D/Transphosphatidylase 2865453 10213641 Rahaq_2634 Rahnella sp. Y9602 phospholipase D/Transphosphatidylase YP_004213368.1 2863993 D 741091 CDS YP_004213369.1 322833342 10213642 2865534..2865857 1 NC_015061.1 PFAM: protein of unknown function DUF440; KEGG: spe:Spro_2690 dsDNA-mimic protein; hypothetical protein 2865857 10213642 Rahaq_2635 Rahnella sp. Y9602 hypothetical protein YP_004213369.1 2865534 D 741091 CDS YP_004213370.1 322833343 10213643 complement(2865993..2867030) 1 NC_015061.1 TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: yen:YE2229 oligopeptide transport ATP-binding protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2867030 10213643 Rahaq_2636 Rahnella sp. Y9602 oligopeptide/dipeptide ABC transporter ATPase YP_004213370.1 2865993 R 741091 CDS YP_004213371.1 322833344 10213644 complement(2867027..2868052) 1 NC_015061.1 TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: spe:Spro_2698 oligopeptide transporter ATP-binding component; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2868052 10213644 Rahaq_2637 Rahnella sp. Y9602 oligopeptide/dipeptide ABC transporter ATPase YP_004213371.1 2867027 R 741091 CDS YP_004213372.1 322833345 10213645 complement(2868064..2868972) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kva:Kvar_1987 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2868972 10213645 Rahaq_2638 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213372.1 2868064 R 741091 CDS YP_004213373.1 322833346 10213646 complement(2868988..2869908) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypb:YPTS_2174 oligopeptide transporter permease; binding-protein-dependent transport system inner membrane protein 2869908 10213646 Rahaq_2639 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213373.1 2868988 R 741091 CDS YP_004213374.1 322833347 10213647 complement(2870096..2871736) 1 NC_015061.1 PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE2233 periplasmic oligopeptide-binding protein precursor; family 5 extracellular solute-binding protein 2871736 10213647 Rahaq_2640 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004213374.1 2870096 R 741091 CDS YP_004213375.1 322833348 10213648 complement(2872911..2873555) 1 NC_015061.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: etr:ETAE_1511 multiple antibiotic transporter; multiple antibiotic resistance (MarC)-like protein 2873555 10213648 Rahaq_2641 Rahnella sp. Y9602 multiple antibiotic resistance (MarC)-like protein YP_004213375.1 2872911 R 741091 CDS YP_004213376.1 322833349 10213649 2874091..2876760 1 NC_015061.1 PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: yen:YE2238 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; iron-containing alcohol dehydrogenase 2876760 10213649 Rahaq_2642 Rahnella sp. Y9602 iron-containing alcohol dehydrogenase YP_004213376.1 2874091 D 741091 CDS YP_004213377.1 322833350 10213650 complement(2876873..2877481) 1 NC_015061.1 KEGG: pwa:Pecwa_2283 thymidine kinase; PFAM: thymidine kinase; thymidine kinase 2877481 10213650 Rahaq_2643 Rahnella sp. Y9602 thymidine kinase YP_004213377.1 2876873 R 741091 CDS YP_004213378.1 322833351 10213651 2878105..2878512 1 NC_015061.1 KEGG: spe:Spro_2706 global DNA-binding transcriptional dual regulator H-NS; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS 2878512 10213651 Rahaq_2644 Rahnella sp. Y9602 histone family protein nucleoid-structuring protein H-NS YP_004213378.1 2878105 D 741091 CDS YP_004213379.1 322833352 10213652 complement(2878713..2879720) 1 NC_015061.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: ebi:EbC_24040 UDP-sugar epimerase; NAD-dependent epimerase/dehydratase 2879720 10213652 Rahaq_2645 Rahnella sp. Y9602 NAD-dependent epimerase/dehydratase YP_004213379.1 2878713 R 741091 CDS YP_004213380.1 322833353 10213653 complement(2879730..2881073) 1 NC_015061.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: spe:Spro_2708 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 2881073 10213653 Rahaq_2646 Rahnella sp. Y9602 nucleotide sugar dehydrogenase YP_004213380.1 2879730 R 741091 CDS YP_004213381.1 322833354 10213654 complement(2881289..2882302) 1 NC_015061.1 KEGG: spe:Spro_2710 response regulator of RpoS; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 2882302 10213654 Rahaq_2647 Rahnella sp. Y9602 response regulator receiver protein YP_004213381.1 2881289 R 741091 CDS YP_004213382.1 322833355 10213655 complement(2882399..2883310) 1 NC_015061.1 PFAM: Patatin; KEGG: spe:Spro_2711 hypothetical protein; patatin 2883310 10213655 Rahaq_2648 Rahnella sp. Y9602 patatin YP_004213382.1 2882399 R 741091 CDS YP_004213383.1 322833356 10213656 2883459..2883923 1 NC_015061.1 PFAM: SEC-C motif domain protein; KEGG: ypb:YPTS_2164 hypothetical protein; SEC-C motif domain-containing protein 2883923 10213656 Rahaq_2649 Rahnella sp. Y9602 SEC-C motif domain-containing protein YP_004213383.1 2883459 D 741091 CDS YP_004213384.1 322833357 10213657 2883967..2884815 1 NC_015061.1 KEGG: spe:Spro_2713 formyltetrahydrofolate deformylase; TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein; formyltetrahydrofolate deformylase 2884815 10213657 Rahaq_2650 Rahnella sp. Y9602 formyltetrahydrofolate deformylase YP_004213384.1 2883967 D 741091 CDS YP_004213385.1 322833358 10213659 complement(2885343..2887175) 1 NC_015061.1 KEGG: atu:Atu4723 ABC transporter nucleotide binding/ATPase protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter 2887175 10213659 Rahaq_2651 Rahnella sp. Y9602 ABC transporter YP_004213385.1 2885343 R 741091 CDS YP_004213386.1 322833359 10213660 complement(2887177..2888610) 1 NC_015061.1 PFAM: Microcystin LR degradation protein MlrC-like; MlrC domain protein; KEGG: rlg:Rleg_4101 microcystin LR degradation protein MlrC-like protein; microcystin LR degradation protein MlrC-like protein 2888610 10213660 Rahaq_2652 Rahnella sp. Y9602 microcystin LR degradation protein MlrC-like protein YP_004213386.1 2887177 R 741091 CDS YP_004213387.1 322833360 10213661 complement(2888623..2889762) 1 NC_015061.1 PFAM: ROK family protein; KEGG: ara:Arad_8668 transcriptional regulator protein; ROK family protein 2889762 10213661 Rahaq_2653 Rahnella sp. Y9602 ROK family protein YP_004213387.1 2888623 R 741091 CDS YP_004213388.1 322833361 10213662 2889998..2891542 1 NC_015061.1 PFAM: extracellular solute-binding protein family 5; KEGG: rfr:Rfer_3103 extracellular solute-binding protein; family 5 extracellular solute-binding protein 2891542 10213662 Rahaq_2654 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004213388.1 2889998 D 741091 CDS YP_004213389.1 322833362 10213663 2891570..2892490 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: enc:ECL_02888 peptide/nickel transport system permease protein; binding-protein-dependent transport system inner membrane protein 2892490 10213663 Rahaq_2655 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213389.1 2891570 D 741091 CDS YP_004213390.1 322833363 10213664 2892490..2893356 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH0030 oligopeptide ABC transporter (permease); binding-protein-dependent transport system inner membrane protein 2893356 10213664 Rahaq_2656 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213390.1 2892490 D 741091 CDS YP_004213391.1 322833364 10213665 2893353..2894282 1 NC_015061.1 PFAM: ROK family protein; KEGG: oan:Oant_3487 ROK family protein; ROK family protein 2894282 10213665 Rahaq_2657 Rahnella sp. Y9602 ROK family protein YP_004213391.1 2893353 D 741091 CDS YP_004213392.1 322833365 10213666 complement(2894457..2895026) 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dac:Daci_2652 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2895026 10213666 Rahaq_2658 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004213392.1 2894457 R 741091 CDS YP_004213393.1 322833366 10213667 2895129..2895968 1 NC_015061.1 KEGG: kva:Kvar_2401 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase; diaminopimelate epimerase 2895968 10213667 Rahaq_2659 Rahnella sp. Y9602 diaminopimelate epimerase YP_004213393.1 2895129 D 741091 CDS YP_004213394.1 322833367 10213668 2896291..2897670 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2097 major facilitator transporter; major facilitator superfamily protein 2897670 10213668 Rahaq_2660 Rahnella sp. Y9602 major facilitator superfamily protein YP_004213394.1 2896291 D 741091 CDS YP_004213395.1 322833368 10213669 2897776..2899038 1 NC_015061.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; Extradiol ring-cleavage dioxygenase LigAB LigA subunit; KEGG: spe:Spro_2096 protocatechuate 4,5-dioxygenase; extradiol ring-cleavage dioxygenase class III protein subunit B 2899038 10213669 Rahaq_2661 Rahnella sp. Y9602 extradiol ring-cleavage dioxygenase class III protein subunit B YP_004213395.1 2897776 D 741091 CDS YP_004213396.1 322833369 10213670 2899035..2899868 1 NC_015061.1 PFAM: amidohydrolase 2; KEGG: eay:EAM_1903 amidohydrolase; amidohydrolase 2899868 10213670 Rahaq_2662 Rahnella sp. Y9602 amidohydrolase YP_004213396.1 2899035 D 741091 CDS YP_004213397.1 322833370 10213671 2899885..2900325 1 NC_015061.1 TIGRFAM: 3-dehydroquinate dehydratase, type II; KEGG: spe:Spro_2094 3-dehydroquinate dehydratase, type II; PFAM: dehydroquinase class II; 3-dehydroquinate dehydratase 2900325 10213671 Rahaq_2663 Rahnella sp. Y9602 3-dehydroquinate dehydratase YP_004213397.1 2899885 D 741091 CDS YP_004213398.1 322833371 10213672 complement(2900397..2901650) 1 NC_015061.1 KEGG: ebi:EbC_pEb10200130 lipid A core, surface polymer ligase WaaL; hypothetical protein 2901650 10213672 Rahaq_2664 Rahnella sp. Y9602 hypothetical protein YP_004213398.1 2900397 R 741091 CDS YP_004213399.1 322833372 10213673 complement(2901643..2902755) 1 NC_015061.1 PFAM: glycosyl transferase group 1; KEGG: ecg:E2348C_3876 UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransfe rase; group 1 glycosyl transferase 2902755 10213673 Rahaq_2665 Rahnella sp. Y9602 group 1 glycosyl transferase YP_004213399.1 2901643 R 741091 CDS YP_004213400.1 322833373 10213674 complement(2903117..2904346) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2093 LysR family transcriptional regulator; LysR family transcriptional regulator 2904346 10213674 Rahaq_2666 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004213400.1 2903117 R 741091 CDS YP_004213401.1 322833374 10213675 2904498..2905244 1 NC_015061.1 PFAM: LmbE family protein; KEGG: spe:Spro_2092 LmbE family protein; LmbE family protein 2905244 10213675 Rahaq_2667 Rahnella sp. Y9602 LmbE family protein YP_004213401.1 2904498 D 741091 CDS YP_004213402.1 322833375 10213676 2905241..2905966 1 NC_015061.1 KEGG: spe:Spro_2091 hypothetical protein; TIGRFAM: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; PFAM: Dimethylmenaquinone methyltransferase; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase 2905966 10213676 Rahaq_2668 Rahnella sp. Y9602 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase YP_004213402.1 2905241 D 741091 CDS YP_004213403.1 322833376 10213677 2905976..2907100 1 NC_015061.1 PFAM: protein of unknown function DUF453; KEGG: kpu:KP1_5416 hypothetical protein; hypothetical protein 2907100 10213677 Rahaq_2669 Rahnella sp. Y9602 hypothetical protein YP_004213403.1 2905976 D 741091 CDS YP_004213404.1 322833377 10213678 2907093..2907977 1 NC_015061.1 PFAM: Phosphogluconate dehydrogenase, NAD-binding, -like; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: ebi:EbC_05330 phosphogluconate dehydrogenase, NAD-binding; Phosphogluconate dehydrogenase, NAD-binding, -like protein 2907977 10213678 Rahaq_2670 Rahnella sp. Y9602 Phosphogluconate dehydrogenase, NAD-binding, -like protein YP_004213404.1 2907093 D 741091 CDS YP_004213405.1 322833378 10213679 complement(2908302..2909258) 1 NC_015061.1 TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: spe:Spro_2351 oligopeptide/dipeptide ABC transporter ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2909258 10213679 Rahaq_2671 Rahnella sp. Y9602 oligopeptide/dipeptide ABC transporter ATPase YP_004213405.1 2908302 R 741091 CDS YP_004213406.1 322833379 10213680 complement(2909258..2910286) 1 NC_015061.1 TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: spe:Spro_2350 oligopeptide/dipeptide ABC transporter ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2910286 10213680 Rahaq_2672 Rahnella sp. Y9602 oligopeptide/dipeptide ABC transporter ATPase YP_004213406.1 2909258 R 741091 CDS YP_004213407.1 322833380 10213681 complement(2910288..2911199) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2349 ATP-dependent peptide transporter membrane subunit; binding-protein-dependent transport system inner membrane protein 2911199 10213681 Rahaq_2673 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213407.1 2910288 R 741091 CDS YP_004213408.1 322833381 10213682 complement(2911204..2912307) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2348 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2912307 10213682 Rahaq_2674 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213408.1 2911204 R 741091 CDS YP_004213409.1 322833382 10213683 complement(2912282..2913862) 1 NC_015061.1 PFAM: extracellular solute-binding protein family 5; KEGG: spe:Spro_2347 extracellular solute-binding protein; family 5 extracellular solute-binding protein 2913862 10213683 Rahaq_2675 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004213409.1 2912282 R 741091 CDS YP_004213410.1 322833383 10213684 complement(2913910..2914491) 1 NC_015061.1 PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; KEGG: spe:Spro_2346 D-alanyl-D-alanine dipeptidase; peptidase M15D vanX D-ala-D-ala dipeptidase 2914491 10213684 Rahaq_2676 Rahnella sp. Y9602 peptidase M15D vanX D-ala-D-ala dipeptidase YP_004213410.1 2913910 R 741091 CDS YP_004213411.1 322833384 10213685 complement(2914520..2915392) 1 NC_015061.1 KEGG: spe:Spro_2345 RpiR family transcriptional regulator; RpiR family transcriptional regulator 2915392 10213685 Rahaq_2677 Rahnella sp. Y9602 RpiR family transcriptional regulator YP_004213411.1 2914520 R 741091 CDS YP_004213412.1 322833385 10213688 complement(2916124..2917782) 1 NC_015061.1 KEGG: spe:Spro_2521 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; alpha amylase 2917782 10213688 Rahaq_2679 Rahnella sp. Y9602 alpha amylase YP_004213412.1 2916124 R 741091 CDS YP_004213413.1 322833386 10213689 complement(2917782..2919437) 1 NC_015061.1 KEGG: esa:ESA_02710 hypothetical protein; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; alpha amylase 2919437 10213689 Rahaq_2680 Rahnella sp. Y9602 alpha amylase YP_004213413.1 2917782 R 741091 CDS YP_004213414.1 322833387 10213690 complement(2919460..2920569) 1 NC_015061.1 KEGG: spe:Spro_2522 ABC transporter-related protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter 2920569 10213690 Rahaq_2681 Rahnella sp. Y9602 ABC transporter YP_004213414.1 2919460 R 741091 CDS YP_004213415.1 322833388 10213691 complement(2920632..2921993) 1 NC_015061.1 PFAM: glycoside hydrolase family 4; KEGG: spe:Spro_2523 glycoside hydrolase family protein; glycoside hydrolase 2921993 10213691 Rahaq_2682 Rahnella sp. Y9602 glycoside hydrolase YP_004213415.1 2920632 R 741091 CDS YP_004213416.1 322833389 10213692 complement(2922029..2922874) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2524 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2922874 10213692 Rahaq_2683 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213416.1 2922029 R 741091 CDS YP_004213417.1 322833390 10213693 complement(2922877..2923857) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2525 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2923857 10213693 Rahaq_2684 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213417.1 2922877 R 741091 CDS YP_004213418.1 322833391 10213694 complement(2923894..2925159) 1 NC_015061.1 PFAM: extracellular solute-binding protein family 1; KEGG: spe:Spro_2526 extracellular solute-binding protein; extracellular solute-binding protein 2925159 10213694 Rahaq_2685 Rahnella sp. Y9602 extracellular solute-binding protein YP_004213418.1 2923894 R 741091 CDS YP_004213419.1 322833392 10213695 2925282..2926217 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2527 LysR family transcriptional regulator; LysR family transcriptional regulator 2926217 10213695 Rahaq_2686 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004213419.1 2925282 D 741091 CDS YP_004213420.1 322833393 10213696 complement(2926218..2926484) 1 NC_015061.1 KEGG: car:cauri_2289 PTS system, glucose-specific IIABC component; PTS system glucose-specific transporter subunit IIABC 2926484 10213696 Rahaq_2687 Rahnella sp. Y9602 PTS system glucose-specific transporter subunit IIABC YP_004213420.1 2926218 R 741091 CDS YP_004213421.1 322833394 10213697 complement(2926747..2927697) 1 NC_015061.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: esa:ESA_03964 hypothetical protein; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 2927697 10213697 Rahaq_2688 Rahnella sp. Y9602 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_004213421.1 2926747 R 741091 CDS YP_004213422.1 322833395 10213698 complement(2927707..2929023) 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: esa:ESA_03965 hypothetical protein; major facilitator superfamily protein 2929023 10213698 Rahaq_2689 Rahnella sp. Y9602 major facilitator superfamily protein YP_004213422.1 2927707 R 741091 CDS YP_004213423.1 322833396 10213699 complement(2929186..2930334) 1 NC_015061.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pwa:Pecwa_0025 galactonate dehydratase; mandelate racemase/muconate lactonizing protein 2930334 10213699 Rahaq_2690 Rahnella sp. Y9602 mandelate racemase/muconate lactonizing protein YP_004213423.1 2929186 R 741091 CDS YP_004213424.1 322833397 10213700 complement(2930331..2930948) 1 NC_015061.1 PFAM: KDPG and KHG aldolase; KEGG: spe:Spro_0043 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; KDPG and KHG aldolase 2930948 10213700 Rahaq_2691 Rahnella sp. Y9602 KDPG and KHG aldolase YP_004213424.1 2930331 R 741091 CDS YP_004213425.1 322833398 10213701 complement(2930932..2931828) 1 NC_015061.1 KEGG: pwa:Pecwa_0023 2-dehydro-3-deoxygalactonokinase; PFAM: 2-keto-3-deoxy-galactonokinase; 2-dehydro-3-deoxygalactonokinase 2931828 10213701 Rahaq_2692 Rahnella sp. Y9602 2-dehydro-3-deoxygalactonokinase YP_004213425.1 2930932 R 741091 CDS YP_004213426.1 322833399 10213702 complement(2931825..2932523) 1 NC_015061.1 KEGG: pwa:Pecwa_0022 GntR domain protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 2932523 10213702 Rahaq_2693 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004213426.1 2931825 R 741091 CDS YP_004213427.1 322833400 10213704 2933187..2933624 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_3499 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2933624 10213704 Rahaq_2695 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004213427.1 2933187 D 741091 CDS YP_004213428.1 322833401 10213705 2933995..2935233 1 NC_015061.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ent:Ent638_1530 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 2935233 10213705 Rahaq_2696 Rahnella sp. Y9602 transposase IS116/IS110/IS902 family protein YP_004213428.1 2933995 D 741091 CDS YP_004213429.1 322833402 10213706 complement(2935371..2936120) 1 NC_015061.1 KEGG: enc:ECL_03132 hypothetical protein; hypothetical protein 2936120 10213706 Rahaq_2697 Rahnella sp. Y9602 hypothetical protein YP_004213429.1 2935371 R 741091 CDS YP_004213430.1 322833403 10213708 complement(2937013..2937630) 1 NC_015061.1 PFAM: lysine exporter protein (LYSE/YGGA); KEGG: ddd:Dda3937_01179 threonine efflux protein; lysine exporter protein LysE/YggA 2937630 10213708 Rahaq_2699 Rahnella sp. Y9602 lysine exporter protein LysE/YggA YP_004213430.1 2937013 R 741091 CDS YP_004213431.1 322833404 10213709 complement(2937902..2938909) 1 NC_015061.1 KEGG: ebi:EbC_44350 conserved uncharacterized protein; hypothetical protein 2938909 10213709 Rahaq_2700 Rahnella sp. Y9602 hypothetical protein YP_004213431.1 2937902 R 741091 CDS YP_004213432.1 322833405 10213710 2939339..2939608 1 NC_015061.1 KEGG: kpu:KP1_2833 hypothetical protein; hypothetical protein 2939608 10213710 Rahaq_2701 Rahnella sp. Y9602 hypothetical protein YP_004213432.1 2939339 D 741091 CDS YP_004213433.1 322833406 10213711 2939875..2940225 1 NC_015061.1 KEGG: ecz:ECS88_2192 conserved hypothetical protein from phage origin; membrane protein; hypothetical protein 2940225 10213711 Rahaq_2702 Rahnella sp. Y9602 hypothetical protein YP_004213433.1 2939875 D 741091 CDS YP_004213434.1 322833407 10213712 2940436..2941497 1 NC_015061.1 KEGG: epy:EpC_04550 conserved uncharacterized protein; hypothetical protein 2941497 10213712 Rahaq_2703 Rahnella sp. Y9602 hypothetical protein YP_004213434.1 2940436 D 741091 CDS YP_004213435.1 322833408 10213713 complement(2941783..2942523) 1 NC_015061.1 KEGG: stt:t0349 hypothetical protein; hypothetical protein 2942523 10213713 Rahaq_2704 Rahnella sp. Y9602 hypothetical protein YP_004213435.1 2941783 R 741091 CDS YP_004213436.1 322833409 10213714 complement(2942876..2943664) 1 NC_015061.1 KEGG: dac:Daci_4287 N-acetyltransferase; PFAM: N-acetyltransferase; arylamine N-acetyltransferase 2943664 10213714 Rahaq_2705 Rahnella sp. Y9602 arylamine N-acetyltransferase YP_004213436.1 2942876 R 741091 CDS YP_004213437.1 322833410 10213715 2943763..2945199 1 NC_015061.1 manually curated; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: dac:Daci_4286 transcriptional regulator; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 2945199 10213715 Rahaq_2706 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004213437.1 2943763 D 741091 CDS YP_004213438.1 322833411 10213716 complement(2945303..2946223) 1 NC_015061.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ebi:EbC_37500 hypothetical protein; hypothetical protein 2946223 10213716 Rahaq_2707 Rahnella sp. Y9602 hypothetical protein YP_004213438.1 2945303 R 741091 CDS YP_004213439.1 322833412 10213717 2946460..2947302 1 NC_015061.1 KEGG: ebi:EbC_37490 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 2947302 10213717 Rahaq_2708 Rahnella sp. Y9602 family 3 extracellular solute-binding protein YP_004213439.1 2946460 D 741091 CDS YP_004213440.1 322833413 10213718 2947306..2948016 1 NC_015061.1 KEGG: ebi:EbC_37480 allophanate hydrolase subunit 1; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; allophanate hydrolase subunit 1 2948016 10213718 Rahaq_2709 Rahnella sp. Y9602 allophanate hydrolase subunit 1 YP_004213440.1 2947306 D 741091 CDS YP_004213441.1 322833414 10213719 2948013..2949014 1 NC_015061.1 SMART: Allophanate hydrolase subunit 2; TIGRFAM: urea amidolyase related protein; KEGG: ebi:EbC_37470 allophanate hydrolase subunit 2; PFAM: Allophanate hydrolase subunit 2; urea amidolyase 2949014 10213719 Rahaq_2710 Rahnella sp. Y9602 urea amidolyase YP_004213441.1 2948013 D 741091 CDS YP_004213442.1 322833415 10213720 complement(2949083..2950288) 1 NC_015061.1 PFAM: aminotransferase class I and II; KEGG: ebi:EbC_37460 aspartate aminotransferase A; class I and II aminotransferase 2950288 10213720 Rahaq_2711 Rahnella sp. Y9602 class I and II aminotransferase YP_004213442.1 2949083 R 741091 CDS YP_004213443.1 322833416 10213721 2950658..2951581 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebi:EbC_37450 transcriptional regulator, LysR family; LysR family transcriptional regulator 2951581 10213721 Rahaq_2712 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004213443.1 2950658 D 741091 CDS YP_004213444.1 322833417 10213722 2951722..2952162 1 NC_015061.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: ebi:EbC_37440 hypothetical protein; biotin/lipoyl attachment domain-containing protein 2952162 10213722 Rahaq_2713 Rahnella sp. Y9602 biotin/lipoyl attachment domain-containing protein YP_004213444.1 2951722 D 741091 CDS YP_004213445.1 322833418 10213723 2952159..2952941 1 NC_015061.1 PFAM: LamB/YcsF family protein; KEGG: ebi:EbC_37430 LamB/YcsF family protein; LamB/YcsF family protein 2952941 10213723 Rahaq_2714 Rahnella sp. Y9602 LamB/YcsF family protein YP_004213445.1 2952159 D 741091 CDS YP_004213446.1 322833419 10213724 2953075..2953824 1 NC_015061.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebi:EbC_37420 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2953824 10213724 Rahaq_2715 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004213446.1 2953075 D 741091 CDS YP_004213447.1 322833420 10213725 2953875..2954570 1 NC_015061.1 KEGG: ebi:EbC_37410 polar amino acid ABC transporter permease protein; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 2954570 10213725 Rahaq_2716 Rahnella sp. Y9602 polar amino acid ABC transporter inner membrane subunit YP_004213447.1 2953875 D 741091 CDS YP_004213448.1 322833421 10213726 2954575..2955324 1 NC_015061.1 KEGG: ebi:EbC_37400 polar amino acid ABC transporter permease protein; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 2955324 10213726 Rahaq_2717 Rahnella sp. Y9602 polar amino acid ABC transporter inner membrane subunit YP_004213448.1 2954575 D 741091 CDS YP_004213449.1 322833422 10213727 2955337..2956074 1 NC_015061.1 KEGG: ebi:EbC_37390 polar amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2956074 10213727 Rahaq_2718 Rahnella sp. Y9602 ABC transporter YP_004213449.1 2955337 D 741091 CDS YP_004213450.1 322833423 10213728 complement(2956184..2956537) 1 NC_015061.1 KEGG: eca:ECA1595 hypothetical protein; hypothetical protein 2956537 10213728 Rahaq_2719 Rahnella sp. Y9602 hypothetical protein YP_004213450.1 2956184 R 741091 CDS YP_004213451.1 322833424 10213729 complement(2956494..2956661) 1 NC_015061.1 hypothetical protein 2956661 10213729 Rahaq_2720 Rahnella sp. Y9602 hypothetical protein YP_004213451.1 2956494 R 741091 CDS YP_004213452.1 322833425 10213730 complement(2956775..2957644) 1 NC_015061.1 KEGG: pst:PSPTO_3020 hypothetical protein; hypothetical protein 2957644 10213730 Rahaq_2721 Rahnella sp. Y9602 hypothetical protein YP_004213452.1 2956775 R 741091 CDS YP_004213453.1 322833426 10213732 2957991..2958866 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pfs:PFLU3381 LysR-family transcriptional regulator; LysR family transcriptional regulator 2958866 10213732 Rahaq_2723 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004213453.1 2957991 D 741091 CDS YP_004213454.1 322833427 10213733 2959090..2960403 1 NC_015061.1 PFAM: FAD dependent oxidoreductase; KEGG: pct:PC1_4199 FAD dependent oxidoreductase; FAD dependent oxidoreductase 2960403 10213733 Rahaq_2724 Rahnella sp. Y9602 FAD dependent oxidoreductase YP_004213454.1 2959090 D 741091 CDS YP_004213455.1 322833428 10213734 complement(2960440..2961096) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rlt:Rleg2_6509 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2961096 10213734 Rahaq_2725 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213455.1 2960440 R 741091 CDS YP_004213456.1 322833429 10213735 complement(2961077..2962231) 1 NC_015061.1 KEGG: ara:Arad_3603 amino acid ABC transporter; PFAM: ABC transporter related; NIL domain; SMART: AAA ATPase; ABC transporter 2962231 10213735 Rahaq_2726 Rahnella sp. Y9602 ABC transporter YP_004213456.1 2961077 R 741091 CDS YP_004213457.1 322833430 10213736 complement(2962243..2963085) 1 NC_015061.1 KEGG: mlo:mll4794 outer membrane lipoprotein; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; lipoprotein 2963085 10213736 Rahaq_2727 Rahnella sp. Y9602 lipoprotein YP_004213457.1 2962243 R 741091 CDS YP_004213458.1 322833431 10213737 complement(2963336..2965642) 1 NC_015061.1 KEGG: spe:Spro_3126 phosphoglycerol transferase I; PFAM: sulfatase; Phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase 2965642 10213737 Rahaq_2728 Rahnella sp. Y9602 Phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase YP_004213458.1 2963336 R 741091 CDS YP_004213459.1 322833432 10213738 complement(2966062..2966778) 1 NC_015061.1 KEGG: ent:Ent638_2495 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2966778 10213738 Rahaq_2729 Rahnella sp. Y9602 ABC transporter YP_004213459.1 2966062 R 741091 CDS YP_004213460.1 322833433 10213739 complement(2966775..2967668) 1 NC_015061.1 KEGG: ent:Ent638_2494 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2967668 10213739 Rahaq_2730 Rahnella sp. Y9602 ABC transporter YP_004213460.1 2966775 R 741091 CDS YP_004213461.1 322833434 10213740 complement(2967665..2968954) 1 NC_015061.1 PFAM: inner-membrane translocator; KEGG: ent:Ent638_2493 inner-membrane translocator; inner-membrane translocator 2968954 10213740 Rahaq_2731 Rahnella sp. Y9602 inner-membrane translocator YP_004213461.1 2967665 R 741091 CDS YP_004213462.1 322833435 10213741 complement(2968965..2969879) 1 NC_015061.1 PFAM: inner-membrane translocator; KEGG: ent:Ent638_2492 inner-membrane translocator; inner-membrane translocator 2969879 10213741 Rahaq_2732 Rahnella sp. Y9602 inner-membrane translocator YP_004213462.1 2968965 R 741091 CDS YP_004213463.1 322833436 10213742 complement(2970069..2971196) 1 NC_015061.1 PFAM: Extracellular ligand-binding receptor; KEGG: enc:ECL_01382 branched-chain amino acid transport system substrate-binding protein; extracellular ligand-binding receptor 2971196 10213742 Rahaq_2733 Rahnella sp. Y9602 extracellular ligand-binding receptor YP_004213463.1 2970069 R 741091 CDS YP_004213464.1 322833437 10213743 2971609..2971824 1 NC_015061.1 PFAM: protein of unknown function DUF903; KEGG: set:SEN1470 lipoprotein; hypothetical protein 2971824 10213743 Rahaq_2734 Rahnella sp. Y9602 hypothetical protein YP_004213464.1 2971609 D 741091 CDS YP_004213465.1 322833438 10213744 complement(2971951..2973780) 1 NC_015061.1 KEGG: ebi:EbC_44400 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 2973780 10213744 Rahaq_2735 Rahnella sp. Y9602 methyl-accepting chemotaxis sensory transducer YP_004213465.1 2971951 R 741091 CDS YP_004213466.1 322833439 10213745 complement(2974123..2975097) 1 NC_015061.1 KEGG: ppg:PputGB1_2870 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase; porphobilinogen synthase 2975097 10213745 Rahaq_2736 Rahnella sp. Y9602 porphobilinogen synthase YP_004213466.1 2974123 R 741091 CDS YP_004213467.1 322833440 10213746 complement(2975313..2977412) 1 NC_015061.1 KEGG: ypb:YPTS_0093 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; peptidase C39 bacteriocin processing; SMART: AAA ATPase; ABC transporter 2977412 10213746 Rahaq_2737 Rahnella sp. Y9602 ABC transporter YP_004213467.1 2975313 R 741091 CDS YP_004213468.1 322833441 10213747 complement(2977399..2978685) 1 NC_015061.1 PFAM: secretion protein HlyD family protein; KEGG: ypb:YPTS_0094 secretion protein HlyD family protein; secretion protein HlyD family protein 2978685 10213747 Rahaq_2738 Rahnella sp. Y9602 secretion protein HlyD family protein YP_004213468.1 2977399 R 741091 CDS YP_004213469.1 322833442 10213748 2979112..2979303 1 NC_015061.1 KEGG: sbl:Sbal_2364 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2979303 10213748 Rahaq_2739 Rahnella sp. Y9602 methyl-accepting chemotaxis sensory transducer YP_004213469.1 2979112 D 741091 CDS YP_004213470.1 322833443 10213749 2979549..2982059 1 NC_015061.1 KEGG: esa:ESA_01215 hypothetical protein; TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; PFAM: Protein of unknown function DUF2345; Rhs element Vgr protein 2982059 10213749 Rahaq_2740 Rahnella sp. Y9602 Rhs element Vgr protein YP_004213470.1 2979549 D 741091 CDS YP_004213471.1 322833444 10213750 2982056..2983318 1 NC_015061.1 PFAM: VRR-NUC domain-containing protein; KEGG: ses:SARI_00051 hypothetical protein; VRR-NUC domain-containing protein 2983318 10213750 Rahaq_2741 Rahnella sp. Y9602 VRR-NUC domain-containing protein YP_004213471.1 2982056 D 741091 CDS YP_004213472.1 322833445 10213751 2983332..2984534 1 NC_015061.1 KEGG: ses:SARI_00052 hypothetical protein; hypothetical protein 2984534 10213751 Rahaq_2742 Rahnella sp. Y9602 hypothetical protein YP_004213472.1 2983332 D 741091 CDS YP_004213473.1 322833446 10213752 2984623..2985453 1 NC_015061.1 KEGG: ent:Ent638_2907 hypothetical protein; hypothetical protein 2985453 10213752 Rahaq_2743 Rahnella sp. Y9602 hypothetical protein YP_004213473.1 2984623 D 741091 CDS YP_004213474.1 322833447 10213753 complement(2985534..2986601) 1 NC_015061.1 PFAM: Uncharacterised protein family UPF0283; KEGG: spe:Spro_2618 hypothetical protein; hypothetical protein 2986601 10213753 Rahaq_2744 Rahnella sp. Y9602 hypothetical protein YP_004213474.1 2985534 R 741091 CDS YP_004213475.1 322833448 10213754 complement(2986598..2987995) 1 NC_015061.1 PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: spe:Spro_2619 hypothetical protein; hypothetical protein 2987995 10213754 Rahaq_2745 Rahnella sp. Y9602 hypothetical protein YP_004213475.1 2986598 R 741091 CDS YP_004213476.1 322833449 10213755 complement(2987976..2988221) 1 NC_015061.1 PFAM: shock protein PspD; KEGG: spe:Spro_2621 peripheral inner membrane phage-shock protein; shock protein PspD 2988221 10213755 Rahaq_2746 Rahnella sp. Y9602 shock protein PspD YP_004213476.1 2987976 R 741091 CDS YP_004213477.1 322833450 10213756 complement(2988306..2988665) 1 NC_015061.1 KEGG: yen:YE2119 DNA-binding transcriptional activator PspC; TIGRFAM: phage shock protein C; PFAM: PspC domain protein; phage shock protein C, PspC 2988665 10213756 Rahaq_2747 Rahnella sp. Y9602 phage shock protein C, PspC YP_004213477.1 2988306 R 741091 CDS YP_004213478.1 322833451 10213757 complement(2988665..2988892) 1 NC_015061.1 KEGG: yen:YE2120 phage shock protein B; TIGRFAM: phage shock protein B; PFAM: shock B family protein; phage shock protein B 2988892 10213757 Rahaq_2748 Rahnella sp. Y9602 phage shock protein B YP_004213478.1 2988665 R 741091 CDS YP_004213479.1 322833452 10213758 complement(2988982..2989653) 1 NC_015061.1 KEGG: spe:Spro_2624 phage shock protein PspA; TIGRFAM: phage shock protein A; PFAM: PspA/IM30 family protein; phage shock protein A, PspA 2989653 10213758 Rahaq_2749 Rahnella sp. Y9602 phage shock protein A, PspA YP_004213479.1 2988982 R 741091 CDS YP_004213480.1 322833453 10213759 2989886..2990893 1 NC_015061.1 TIGRFAM: psp operon transcriptional activator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; KEGG: spe:Spro_2625 phage shock protein operon transcriptional activator; SMART: AAA ATPase; Fis family transcriptional regulator 2990893 10213759 Rahaq_2750 Rahnella sp. Y9602 Fis family transcriptional regulator YP_004213480.1 2989886 D 741091 CDS YP_004213481.1 322833454 10213760 complement(2991114..2992301) 1 NC_015061.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: spe:Spro_2626 cobalamin synthesis protein P47K; cobalamin synthesis protein P47K 2992301 10213760 Rahaq_2751 Rahnella sp. Y9602 cobalamin synthesis protein P47K YP_004213481.1 2991114 R 741091 CDS YP_004213482.1 322833455 10213761 2992541..2994223 1 NC_015061.1 PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE2125 peptide transport periplasmic protein precursor; family 5 extracellular solute-binding protein 2994223 10213761 Rahaq_2752 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004213482.1 2992541 D 741091 CDS YP_004213483.1 322833456 10213762 2994220..2995185 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE2126 peptide transport system permease protein; binding-protein-dependent transport system inner membrane protein 2995185 10213762 Rahaq_2753 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213483.1 2994220 D 741091 CDS YP_004213484.1 322833457 10213763 2995172..2996062 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2631 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2996062 10213763 Rahaq_2754 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213484.1 2995172 D 741091 CDS YP_004213485.1 322833458 10213764 2996062..2997054 1 NC_015061.1 TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: spe:Spro_2632 oligopeptide/dipeptide ABC transporter ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2997054 10213764 Rahaq_2755 Rahnella sp. Y9602 oligopeptide/dipeptide ABC transporter ATPase YP_004213485.1 2996062 D 741091 CDS YP_004213486.1 322833459 10213765 2997054..2997863 1 NC_015061.1 KEGG: spe:Spro_2633 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2997863 10213765 Rahaq_2756 Rahnella sp. Y9602 ABC transporter YP_004213486.1 2997054 D 741091 CDS YP_004213487.1 322833460 10213766 2998071..2999273 1 NC_015061.1 KEGG: spe:Spro_2634 uncharacterized peroxidase-related enzyme; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; peroxidase-like protein 2999273 10213766 Rahaq_2757 Rahnella sp. Y9602 peroxidase-like protein YP_004213487.1 2998071 D 741091 CDS YP_004213488.1 322833461 10213767 2999856..3001367 1 NC_015061.1 KEGG: spe:Spro_2233 tripeptide transporter permease; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; amino acid/peptide transporter 3001367 10213767 Rahaq_2758 Rahnella sp. Y9602 amino acid/peptide transporter YP_004213488.1 2999856 D 741091 CDS YP_004213489.1 322833462 10213768 3001498..3002052 1 NC_015061.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: etr:ETAE_1299 hypothetical protein; transferase hexapeptide repeat containing protein 3002052 10213768 Rahaq_2759 Rahnella sp. Y9602 transferase hexapeptide repeat containing protein YP_004213489.1 3001498 D 741091 CDS YP_004213490.1 322833463 10213769 complement(3002160..3004055) 1 NC_015061.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; KEGG: spe:Spro_2420 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAC repeat-containing protein; GAF domain protein; PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase 3004055 10213769 Rahaq_2760 Rahnella sp. Y9602 PAS/PAC and GAF sensor-containing diguanylate cyclase YP_004213490.1 3002160 R 741091 CDS YP_004213491.1 322833464 10213770 complement(3004220..3005251) 1 NC_015061.1 KEGG: vap:Vapar_6347 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 3005251 10213770 Rahaq_2761 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004213491.1 3004220 R 741091 CDS YP_004213492.1 322833465 10213771 3005559..3005828 1 NC_015061.1 KEGG: spe:Spro_1004 hypothetical protein; hypothetical protein 3005828 10213771 Rahaq_2762 Rahnella sp. Y9602 hypothetical protein YP_004213492.1 3005559 D 741091 CDS YP_004213493.1 322833466 10213772 3006387..3008060 1 NC_015061.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: ebi:EbC_26110 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 3008060 10213772 Rahaq_2763 Rahnella sp. Y9602 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_004213493.1 3006387 D 741091 CDS YP_004213494.1 322833467 10213773 3008185..3009051 1 NC_015061.1 KEGG: spe:Spro_2222 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; dihydrodipicolinate synthase 3009051 10213773 Rahaq_2764 Rahnella sp. Y9602 dihydrodipicolinate synthase YP_004213494.1 3008185 D 741091 CDS YP_004213495.1 322833468 10213774 3009225..3009830 1 NC_015061.1 PFAM: Glutathione S-transferase domain; KEGG: spe:Spro_2221 glutathionine S-transferase; glutathione S-transferase 3009830 10213774 Rahaq_2765 Rahnella sp. Y9602 glutathione S-transferase YP_004213495.1 3009225 D 741091 CDS YP_004213496.1 322833469 10213775 complement(3009923..3010783) 1 NC_015061.1 TIGRFAM: pyridoxal kinase; KEGG: spe:Spro_2220 pyridoxamine kinase; PFAM: PfkB domain protein; pyridoxal kinase 3010783 10213775 Rahaq_2766 Rahnella sp. Y9602 pyridoxal kinase YP_004213496.1 3009923 R 741091 CDS YP_004213497.1 322833470 10213776 complement(3010887..3012161) 1 NC_015061.1 SMART: RNA-binding S4 domain protein; TIGRFAM: tyrosyl-tRNA synthetase; KEGG: spe:Spro_2219 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; tyrosyl-tRNA synthetase 3012161 10213776 Rahaq_2767 Rahnella sp. Y9602 tyrosyl-tRNA synthetase YP_004213497.1 3010887 R 741091 CDS YP_004213498.1 322833471 10213777 complement(3012324..3012989) 1 NC_015061.1 TIGRFAM: pyridoxamine 5'-phosphate oxidase; KEGG: spe:Spro_2218 pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; Pyridoxine 5'-phosphate oxidase, dimerisation-like; pyridoxamine 5'-phosphate oxidase 3012989 10213777 Rahaq_2768 Rahnella sp. Y9602 pyridoxamine 5'-phosphate oxidase YP_004213498.1 3012324 R 741091 CDS YP_004213499.1 322833472 10213778 complement(3013117..3013428) 1 NC_015061.1 PFAM: Protein of unknown function DUF2091, periplasmic; KEGG: pwa:Pecwa_2663 hypothetical protein; hypothetical protein 3013428 10213778 Rahaq_2769 Rahnella sp. Y9602 hypothetical protein YP_004213499.1 3013117 R 741091 CDS YP_004213500.1 322833473 10213779 complement(3013513..3014640) 1 NC_015061.1 PFAM: protein of unknown function UPF0075; KEGG: spe:Spro_2216 anhydro-N-acetylmuramic acid kinase; hypothetical protein 3014640 10213779 Rahaq_2770 Rahnella sp. Y9602 hypothetical protein YP_004213500.1 3013513 R 741091 CDS YP_004213501.1 322833474 10213780 3015029..3015499 1 NC_015061.1 KEGG: eay:EAM_1678 outer membrane lipoprotein; outer membrane lipoprotein 3015499 10213780 Rahaq_2771 Rahnella sp. Y9602 outer membrane lipoprotein YP_004213501.1 3015029 D 741091 CDS YP_004213502.1 322833475 10213781 complement(3015612..3016046) 1 NC_015061.1 KEGG: ent:Ent638_1805 transcriptional regulator SlyA; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR 3016046 10213781 Rahaq_2772 Rahnella sp. Y9602 regulatory protein MarR YP_004213502.1 3015612 R 741091 CDS YP_004213503.1 322833476 10213782 3016154..3016465 1 NC_015061.1 PFAM: protein of unknown function DUF1656; KEGG: spe:Spro_2213 hypothetical protein; hypothetical protein 3016465 10213782 Rahaq_2773 Rahnella sp. Y9602 hypothetical protein YP_004213503.1 3016154 D 741091 CDS YP_004213504.1 322833477 10213783 3016467..3017324 1 NC_015061.1 PFAM: secretion protein HlyD family protein; KEGG: spe:Spro_2212 secretion protein HlyD family protein; secretion protein HlyD family protein 3017324 10213783 Rahaq_2774 Rahnella sp. Y9602 secretion protein HlyD family protein YP_004213504.1 3016467 D 741091 CDS YP_004213505.1 322833478 10213784 3017334..3019385 1 NC_015061.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: spe:Spro_2211 fusaric acid resistance protein region; fusaric acid resistance protein 3019385 10213784 Rahaq_2775 Rahnella sp. Y9602 fusaric acid resistance protein YP_004213505.1 3017334 D 741091 CDS YP_004213506.1 322833479 10213785 complement(3019391..3020287) 1 NC_015061.1 PFAM: aldo/keto reductase; KEGG: yen:YE2148 aldo/keto reductase; aldo/keto reductase 3020287 10213785 Rahaq_2776 Rahnella sp. Y9602 aldo/keto reductase YP_004213506.1 3019391 R 741091 CDS YP_004213507.1 322833480 10213786 complement(3020417..3020656) 1 NC_015061.1 PFAM: protein of unknown function DUF1289; KEGG: spe:Spro_2207 hypothetical protein; hypothetical protein 3020656 10213786 Rahaq_2777 Rahnella sp. Y9602 hypothetical protein YP_004213507.1 3020417 R 741091 CDS YP_004213508.1 322833481 10213787 3021069..3022160 1 NC_015061.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: spe:Spro_2202 N-ethylmaleimide reductase; NADH:flavin oxidoreductase 3022160 10213787 Rahaq_2778 Rahnella sp. Y9602 NADH:flavin oxidoreductase YP_004213508.1 3021069 D 741091 CDS YP_004213509.1 322833482 10213788 3022322..3022729 1 NC_015061.1 TIGRFAM: lactoylglutathione lyase; KEGG: spe:Spro_2200 lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; lactoylglutathione lyase 3022729 10213788 Rahaq_2779 Rahnella sp. Y9602 lactoylglutathione lyase YP_004213509.1 3022322 D 741091 CDS YP_004213510.1 322833483 10213789 3022822..3023538 1 NC_015061.1 TIGRFAM: ribonuclease T; PFAM: Exonuclease RNase T and DNA polymerase III; KEGG: spe:Spro_2199 ribonuclease T; SMART: Exonuclease; ribonuclease T 3023538 10213789 Rahaq_2780 Rahnella sp. Y9602 ribonuclease T YP_004213510.1 3022822 D 741091 CDS YP_004213511.1 322833484 10213790 complement(3023614..3023973) 1 NC_015061.1 KEGG: pwa:Pecwa_2670 hypothetical protein; TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; glutaredoxin-like protein 3023973 10213790 Rahaq_2781 Rahnella sp. Y9602 glutaredoxin-like protein YP_004213511.1 3023614 R 741091 CDS YP_004213512.1 322833485 10213791 3024436..3025335 1 NC_015061.1 PFAM: NLP/P60 protein; KEGG: yen:YE2156 hypothetical protein; NLP/P60 protein 3025335 10213791 Rahaq_2782 Rahnella sp. Y9602 NLP/P60 protein YP_004213512.1 3024436 D 741091 CDS YP_004213513.1 322833486 10213792 3025481..3025675 1 NC_015061.1 hypothetical protein 3025675 10213792 Rahaq_2783 Rahnella sp. Y9602 hypothetical protein YP_004213513.1 3025481 D 741091 CDS YP_004213514.1 322833487 10213793 3025925..3026950 1 NC_015061.1 KEGG: ypb:YPTS_2374 DNA-binding transcriptional repressor PurR; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator 3026950 10213793 Rahaq_2784 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004213514.1 3025925 D 741091 CDS YP_004213515.1 322833488 10213794 complement(3026987..3027892) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2194 DNA-binding transcriptional regulator; LysR family transcriptional regulator 3027892 10213794 Rahaq_2785 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004213515.1 3026987 R 741091 CDS YP_004213516.1 322833489 10213795 3028029..3029240 1 NC_015061.1 KEGG: spe:Spro_2193 inner membrane transport protein YdhC; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; Bcr/CflA subfamily drug resistance transporter 3029240 10213795 Rahaq_2786 Rahnella sp. Y9602 Bcr/CflA subfamily drug resistance transporter YP_004213516.1 3028029 D 741091 CDS YP_004213517.1 322833490 10213796 3029601..3030752 1 NC_015061.1 KEGG: spe:Spro_2192 cyclopropane fatty acyl phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 3030752 10213796 Rahaq_2787 Rahnella sp. Y9602 cyclopropane-fatty-acyl-phospholipid synthase YP_004213517.1 3029601 D 741091 CDS YP_004213518.1 322833491 10213797 complement(3030831..3031484) 1 NC_015061.1 TIGRFAM: riboflavin synthase, subunit alpha; KEGG: spe:Spro_2190 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein; riboflavin synthase, subunit alpha 3031484 10213797 Rahaq_2788 Rahnella sp. Y9602 riboflavin synthase, subunit alpha YP_004213518.1 3030831 R 741091 CDS YP_004213519.1 322833492 10213798 3031739..3033112 1 NC_015061.1 KEGG: yen:YE2163 multidrug efflux protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 3033112 10213798 Rahaq_2789 Rahnella sp. Y9602 MATE efflux family protein YP_004213519.1 3031739 D 741091 CDS YP_004213520.1 322833493 10213801 3034010..3035476 1 NC_015061.1 TIGRFAM: pyruvate kinase; KEGG: spe:Spro_2187 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase 3035476 10213801 Rahaq_2790 Rahnella sp. Y9602 pyruvate kinase YP_004213520.1 3034010 D 741091 CDS YP_004213521.1 322833494 10213802 3035770..3036006 1 NC_015061.1 PFAM: hypothetical protein; KEGG: spe:Spro_2186 hypothetical protein; hypothetical protein 3036006 10213802 Rahaq_2791 Rahnella sp. Y9602 hypothetical protein YP_004213521.1 3035770 D 741091 CDS YP_004213522.1 322833495 10213803 complement(3036018..3036122) 1 NC_015061.1 hypothetical protein 3036122 10213803 Rahaq_2792 Rahnella sp. Y9602 hypothetical protein YP_004213522.1 3036018 R 741091 CDS YP_004213523.1 322833496 10213804 complement(3036221..3037234) 1 NC_015061.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding lysin domain; KEGG: yen:YE2166 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 3037234 10213804 Rahaq_2793 Rahnella sp. Y9602 ErfK/YbiS/YcfS/YnhG family protein YP_004213523.1 3036221 R 741091 CDS YP_004213524.1 322833497 10213805 complement(3037496..3037909) 1 NC_015061.1 PFAM: Fe-S metabolism associated SufE; KEGG: yen:YE2167 cysteine desufuration protein SufE; Fe-S metabolism associated SufE 3037909 10213805 Rahaq_2794 Rahnella sp. Y9602 Fe-S metabolism associated SufE YP_004213524.1 3037496 R 741091 CDS YP_004213525.1 322833498 10213806 complement(3037938..3039158) 1 NC_015061.1 KEGG: spe:Spro_2183 SufS subfamily cysteine desulfurase; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; SufS subfamily cysteine desulfurase 3039158 10213806 Rahaq_2795 Rahnella sp. Y9602 SufS subfamily cysteine desulfurase YP_004213525.1 3037938 R 741091 CDS YP_004213526.1 322833499 10213807 complement(3039158..3040459) 1 NC_015061.1 KEGG: spe:Spro_2182 FeS assembly protein SufD; TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; FeS assembly protein SufD 3040459 10213807 Rahaq_2796 Rahnella sp. Y9602 FeS assembly protein SufD YP_004213526.1 3039158 R 741091 CDS YP_004213527.1 322833500 10213808 complement(3040434..3041180) 1 NC_015061.1 TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: spe:Spro_2181 cysteine desulfurase ATPase; SMART: AAA ATPase; FeS assembly ATPase SufC 3041180 10213808 Rahaq_2797 Rahnella sp. Y9602 FeS assembly ATPase SufC YP_004213527.1 3040434 R 741091 CDS YP_004213528.1 322833501 10213809 complement(3041304..3042827) 1 NC_015061.1 KEGG: spe:Spro_2180 cysteine desulfurase activator complex subunit SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; FeS assembly protein SufB 3042827 10213809 Rahaq_2798 Rahnella sp. Y9602 FeS assembly protein SufB YP_004213528.1 3041304 R 741091 CDS YP_004213529.1 322833502 10213810 complement(3042874..3043245) 1 NC_015061.1 KEGG: yen:YE2172 iron-sulfur cluster assembly scaffold protein; TIGRFAM: FeS assembly scaffold SufA; iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; FeS assembly scaffold SufA 3043245 10213810 Rahaq_2799 Rahnella sp. Y9602 FeS assembly scaffold SufA YP_004213529.1 3042874 R 741091 CDS YP_004213530.1 322833503 10213811 3043702..3044106 1 NC_015061.1 KEGG: spe:Spro_2178 hypothetical protein; hypothetical protein 3044106 10213811 Rahaq_2800 Rahnella sp. Y9602 hypothetical protein YP_004213530.1 3043702 D 741091 CDS YP_004213531.1 322833504 10213812 complement(3044223..3044642) 1 NC_015061.1 PFAM: thioesterase superfamily protein; KEGG: spe:Spro_2177 thioesterase superfamily protein; thioesterase superfamily protein 3044642 10213812 Rahaq_2801 Rahnella sp. Y9602 thioesterase superfamily protein YP_004213531.1 3044223 R 741091 CDS YP_004213532.1 322833505 10213813 complement(3044658..3047714) 1 NC_015061.1 PFAM: FAD linked oxidase domain protein; KEGG: spe:Spro_2176 FAD linked oxidase domain-containing protein; FAD linked oxidase domain-containing protein 3047714 10213813 Rahaq_2802 Rahnella sp. Y9602 FAD linked oxidase domain-containing protein YP_004213532.1 3044658 R 741091 CDS YP_004213533.1 322833506 10213814 complement(3047797..3048039) 1 NC_015061.1 KEGG: dan:Dana_GF12714 GF12714 gene product from transcript GF12714-RA; hypothetical protein 3048039 10213814 Rahaq_2803 Rahnella sp. Y9602 hypothetical protein YP_004213533.1 3047797 R 741091 CDS YP_004213534.1 322833507 10213815 3048042..3049139 1 NC_015061.1 PFAM: protein of unknown function UPF0118; KEGG: spe:Spro_2175 hypothetical protein; hypothetical protein 3049139 10213815 Rahaq_2804 Rahnella sp. Y9602 hypothetical protein YP_004213534.1 3048042 D 741091 CDS YP_004213535.1 322833508 10213816 complement(3049576..3051951) 1 NC_015061.1 KEGG: pct:PC1_2456 phosphoenolpyruvate synthase; TIGRFAM: phosphoenolpyruvate synthase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein; phosphoenolpyruvate synthase 3051951 10213816 Rahaq_2805 Rahnella sp. Y9602 phosphoenolpyruvate synthase YP_004213535.1 3049576 R 741091 CDS YP_004213536.1 322833509 10213817 3052460..3053281 1 NC_015061.1 PFAM: protein of unknown function DUF299; KEGG: spe:Spro_2173 hypothetical protein; hypothetical protein 3053281 10213817 Rahaq_2806 Rahnella sp. Y9602 hypothetical protein YP_004213536.1 3052460 D 741091 CDS YP_004213537.1 322833510 10213818 3053411..3054457 1 NC_015061.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: ent:Ent638_1743 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase 3054457 10213818 Rahaq_2807 Rahnella sp. Y9602 phospho-2-dehydro-3-deoxyheptonate aldolase YP_004213537.1 3053411 D 741091 CDS YP_004213538.1 322833511 10213819 3054807..3055844 1 NC_015061.1 PFAM: Haemin-degrading family protein; KEGG: ypb:YPTS_0363 hemin-degrading family protein; hemin-degrading family protein 3055844 10213819 Rahaq_2808 Rahnella sp. Y9602 hemin-degrading family protein YP_004213538.1 3054807 D 741091 CDS YP_004213539.1 322833512 10213820 3055841..3056671 1 NC_015061.1 PFAM: periplasmic binding protein; KEGG: spe:Spro_2167 periplasmic binding protein; periplasmic binding protein 3056671 10213820 Rahaq_2809 Rahnella sp. Y9602 periplasmic binding protein YP_004213539.1 3055841 D 741091 CDS YP_004213540.1 322833513 10213821 3056668..3057696 1 NC_015061.1 PFAM: transport system permease protein; KEGG: yen:YE0328 hemin transport system permease protein HmuU; transport system permease 3057696 10213821 Rahaq_2810 Rahnella sp. Y9602 transport system permease YP_004213540.1 3056668 D 741091 CDS YP_004213541.1 322833514 10213822 3057689..3058477 1 NC_015061.1 KEGG: spe:Spro_2165 hemin importer ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3058477 10213822 Rahaq_2811 Rahnella sp. Y9602 ABC transporter YP_004213541.1 3057689 D 741091 CDS YP_004213542.1 322833515 10213823 complement(3058524..3059978) 1 NC_015061.1 PFAM: protein of unknown function UPF0061; KEGG: spe:Spro_2164 hypothetical protein; hypothetical protein 3059978 10213823 Rahaq_2812 Rahnella sp. Y9602 hypothetical protein YP_004213542.1 3058524 R 741091 CDS YP_004213543.1 322833516 10213824 complement(3060121..3060849) 1 NC_015061.1 PFAM: EAL domain protein; KEGG: spe:Spro_2163 diguanylate phosphodiesterase; diguanylate phosphodiesterase 3060849 10213824 Rahaq_2813 Rahnella sp. Y9602 diguanylate phosphodiesterase YP_004213543.1 3060121 R 741091 CDS YP_004213544.1 322833517 10213825 complement(3061231..3061341) 1 NC_015061.1 hypothetical protein 3061341 10213825 Rahaq_2814 Rahnella sp. Y9602 hypothetical protein YP_004213544.1 3061231 R 741091 CDS YP_004213545.1 322833518 10213826 complement(3061366..3062379) 1 NC_015061.1 KEGG: spe:Spro_2162 lipoate-protein ligase A; TIGRFAM: lipoyltransferase and lipoate-protein ligase; PFAM: biotin/lipoate A/B protein ligase; Lipoate protein ligase-like; lipoyltransferase and lipoate-protein ligase 3062379 10213826 Rahaq_2815 Rahnella sp. Y9602 lipoyltransferase and lipoate-protein ligase YP_004213545.1 3061366 R 741091 CDS YP_004213546.1 322833519 10213827 complement(3062476..3062955) 1 NC_015061.1 PFAM: NLP/P60 protein; KEGG: etr:ETAE_1805 lipoprotein; NLP/P60 protein 3062955 10213827 Rahaq_2816 Rahnella sp. Y9602 NLP/P60 protein YP_004213546.1 3062476 R 741091 CDS YP_004213547.1 322833520 10213828 complement(3063110..3063499) 1 NC_015061.1 KEGG: yen:YE2186 hypothetical protein; hypothetical protein 3063499 10213828 Rahaq_2817 Rahnella sp. Y9602 hypothetical protein YP_004213547.1 3063110 R 741091 CDS YP_004213548.1 322833521 10213829 complement(3063496..3063828) 1 NC_015061.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: spe:Spro_2159 hypothetical protein; hypothetical protein 3063828 10213829 Rahaq_2818 Rahnella sp. Y9602 hypothetical protein YP_004213548.1 3063496 R 741091 CDS YP_004213549.1 322833522 10213830 complement(3063825..3065495) 1 NC_015061.1 PFAM: glycosyl transferase family 39; KEGG: yen:YE2188 4-amino-4-deoxy-L-arabinose transferase; glycosyl transferase family protein 3065495 10213830 Rahaq_2819 Rahnella sp. Y9602 glycosyl transferase family protein YP_004213549.1 3063825 R 741091 CDS YP_004213550.1 322833523 10213831 complement(3065495..3066394) 1 NC_015061.1 PFAM: polysaccharide deacetylase; KEGG: pmr:PMI1046 polysaccharide deacetylase; polysaccharide deacetylase 3066394 10213831 Rahaq_2820 Rahnella sp. Y9602 polysaccharide deacetylase YP_004213550.1 3065495 R 741091 CDS YP_004213551.1 322833524 10213832 complement(3066408..3068390) 1 NC_015061.1 PFAM: NAD-dependent epimerase/dehydratase; formyl transferase domain protein; KEGG: spe:Spro_2156 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; NAD-dependent epimerase/dehydratase 3068390 10213832 Rahaq_2821 Rahnella sp. Y9602 NAD-dependent epimerase/dehydratase YP_004213551.1 3066408 R 741091 CDS YP_004213552.1 322833525 10213833 complement(3068390..3069370) 1 NC_015061.1 PFAM: glycosyl transferase family 2; KEGG: spe:Spro_2155 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; family 2 glycosyl transferase 3069370 10213833 Rahaq_2822 Rahnella sp. Y9602 family 2 glycosyl transferase YP_004213552.1 3068390 R 741091 CDS YP_004213553.1 322833526 10213834 complement(3069370..3070512) 1 NC_015061.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: spe:Spro_2154 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 3070512 10213834 Rahaq_2823 Rahnella sp. Y9602 DegT/DnrJ/EryC1/StrS aminotransferase YP_004213553.1 3069370 R 741091 CDS YP_004213554.1 322833527 10213835 complement(3070762..3070878) 1 NC_015061.1 hypothetical protein 3070878 10213835 Rahaq_2824 Rahnella sp. Y9602 hypothetical protein YP_004213554.1 3070762 R 741091 CDS YP_004213555.1 322833528 10213836 complement(3070860..3071609) 1 NC_015061.1 KEGG: ypm:YP_2210 vitamin B12-transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3071609 10213836 Rahaq_2825 Rahnella sp. Y9602 ABC transporter YP_004213555.1 3070860 R 741091 CDS YP_004213556.1 322833529 10213837 complement(3071629..3072180) 1 NC_015061.1 KEGG: esa:ESA_02112 glutathione peroxidase; PFAM: glutathione peroxidase; peroxiredoxin 3072180 10213837 Rahaq_2826 Rahnella sp. Y9602 peroxiredoxin YP_004213556.1 3071629 R 741091 CDS YP_004213557.1 322833530 10213838 complement(3072253..3073260) 1 NC_015061.1 PFAM: transport system permease protein; KEGG: spe:Spro_2151 vtamin B12-transporter permease; transport system permease 3073260 10213838 Rahaq_2827 Rahnella sp. Y9602 transport system permease YP_004213557.1 3072253 R 741091 CDS YP_004213558.1 322833531 10213839 complement(3073414..3073812) 1 NC_015061.1 PFAM: Protein of unknown function DUF2502; KEGG: yen:YE2196 hypothetical protein; hypothetical protein 3073812 10213839 Rahaq_2828 Rahnella sp. Y9602 hypothetical protein YP_004213558.1 3073414 R 741091 CDS YP_004213559.1 322833532 10213840 3074084..3074242 1 NC_015061.1 KEGG: pct:PC1_0085 hypothetical protein; hypothetical protein 3074242 10213840 Rahaq_2829 Rahnella sp. Y9602 hypothetical protein YP_004213559.1 3074084 D 741091 CDS YP_004213560.1 322833533 10213841 complement(3074593..3074889) 1 NC_015061.1 TIGRFAM: integration host factor, subunit alpha; PFAM: histone family protein DNA-binding protein; KEGG: etr:ETAE_1809 integration host factor, subunit alpha; SMART: histone family protein DNA-binding protein; integration host factor subunit alpha 3074889 10213841 Rahaq_2830 Rahnella sp. Y9602 integration host factor subunit alpha YP_004213560.1 3074593 R 741091 CDS YP_004213561.1 322833534 10213842 complement(3074894..3077281) 1 NC_015061.1 KEGG: spe:Spro_2149 phenylalanyl-tRNA synthetase subunit beta; TIGRFAM: phenylalanyl-tRNA synthetase, subunit beta; phenylalanyl-tRNA synthetase subunit beta 3077281 10213842 Rahaq_2831 Rahnella sp. Y9602 phenylalanyl-tRNA synthetase subunit beta YP_004213561.1 3074894 R 741091 CDS YP_004213562.1 322833535 10213843 complement(3077296..3078279) 1 NC_015061.1 KEGG: ctu:Ctu_18490 phenylalanyl-tRNA synthetase subunit alpha; TIGRFAM: phenylalanyl-tRNA synthetase, subunit alpha; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; phenylalanyl-tRNA synthetase, subunit alpha 3078279 10213843 Rahaq_2832 Rahnella sp. Y9602 phenylalanyl-tRNA synthetase, subunit alpha YP_004213562.1 3077296 R 741091 CDS YP_004213563.1 322833536 10213844 complement(3078629..3078985) 1 NC_015061.1 KEGG: yen:YE1915 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20; 50S ribosomal protein L20 3078985 10213844 Rahaq_2833 Rahnella sp. Y9602 50S ribosomal protein L20 YP_004213563.1 3078629 R 741091 CDS YP_004213564.1 322833537 10213845 complement(3079028..3079225) 1 NC_015061.1 KEGG: ypb:YPTS_2414 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35; 50S ribosomal protein L35 3079225 10213845 Rahaq_2834 Rahnella sp. Y9602 50S ribosomal protein L35 YP_004213564.1 3079028 R 741091 CDS YP_004213565.1 322833538 10213846 complement(3079321..3079872) 1 NC_015061.1 manually curated; TIGRFAM: translation initiation factor IF-3; KEGG: ypi:YpsIP31758_1713 translation initiation factor IF-3; PFAM: Translation initiation factor 3-like; translation initiation factor IF-3 3079872 10213846 Rahaq_2835 Rahnella sp. Y9602 translation initiation factor IF-3 YP_004213565.1 3079321 R 741091 CDS YP_004213566.1 322833539 10213847 complement(3079876..3081804) 1 NC_015061.1 KEGG: ddd:Dda3937_03683 threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain-containing protein; Anticodon-binding domain protein; threonyl-tRNA synthetase 3081804 10213847 Rahaq_2836 Rahnella sp. Y9602 threonyl-tRNA synthetase YP_004213566.1 3079876 R 741091 CDS YP_004213567.1 322833540 10213848 3082094..3082774 1 NC_015061.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: spe:Spro_2141 multiple drug resistance protein MarC; multiple antibiotic resistance (MarC)-like protein 3082774 10213848 Rahaq_2837 Rahnella sp. Y9602 multiple antibiotic resistance (MarC)-like protein YP_004213567.1 3082094 D 741091 CDS YP_004213568.1 322833541 10213849 complement(3082798..3083433) 1 NC_015061.1 PFAM: lytic transglycosylase catalytic; KEGG: spe:Spro_2135 lytic transglycosylase catalytic; lytic transglycosylase 3083433 10213849 Rahaq_2838 Rahnella sp. Y9602 lytic transglycosylase YP_004213568.1 3082798 R 741091 CDS YP_004213569.1 322833542 10213850 3083756..3084625 1 NC_015061.1 PFAM: Fructosamine/Ketosamine-3-kinase; KEGG: ypb:YPTS_2425 fructosamine kinase; fructosamine/Ketosamine-3-kinase 3084625 10213850 Rahaq_2839 Rahnella sp. Y9602 fructosamine/Ketosamine-3-kinase YP_004213569.1 3083756 D 741091 CDS YP_004213570.1 322833543 10213851 complement(3084731..3085279) 1 NC_015061.1 KEGG: yen:YE1891 yfeABCD locus regulator; yfeABCD locus regulator 3085279 10213851 Rahaq_2840 Rahnella sp. Y9602 yfeABCD locus regulator YP_004213570.1 3084731 R 741091 CDS YP_004213571.1 322833544 10213852 3085473..3086138 1 NC_015061.1 KEGG: ebi:EbC_18740 phosphatase YniC; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 3086138 10213852 Rahaq_2841 Rahnella sp. Y9602 HAD-superfamily hydrolase YP_004213571.1 3085473 D 741091 CDS YP_004213572.1 322833545 10213853 3086447..3087283 1 NC_015061.1 KEGG: ypb:YPTS_2430 5-keto-4-deoxyuronate isomerase; PFAM: KduI/IolB isomerase; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase 3087283 10213853 Rahaq_2842 Rahnella sp. Y9602 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase YP_004213572.1 3086447 D 741091 CDS YP_004213573.1 322833546 10213854 3087362..3088123 1 NC_015061.1 KEGG: pct:PC1_1909 2-deoxy-D-gluconate 3-dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; 2-deoxy-D-gluconate 3-dehydrogenase 3088123 10213854 Rahaq_2843 Rahnella sp. Y9602 2-deoxy-D-gluconate 3-dehydrogenase YP_004213573.1 3087362 D 741091 CDS YP_004213574.1 322833547 10213855 3088276..3088833 1 NC_015061.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: pct:PC1_1901 hypothetical protein; membrane-bound metal-dependent hydrolase 3088833 10213855 Rahaq_2844 Rahnella sp. Y9602 membrane-bound metal-dependent hydrolase YP_004213574.1 3088276 D 741091 CDS YP_004213575.1 322833548 10213856 3089023..3090414 1 NC_015061.1 PFAM: sodium:dicarboxylate symporter; KEGG: spe:Spro_2123 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 3090414 10213856 Rahaq_2845 Rahnella sp. Y9602 sodium:dicarboxylate symporter YP_004213575.1 3089023 D 741091 CDS YP_004213576.1 322833549 10213857 complement(3090502..3091293) 1 NC_015061.1 KEGG: pct:PC1_1885 transcriptional regulator, IclR family; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; IclR family transcriptional regulator 3091293 10213857 Rahaq_2846 Rahnella sp. Y9602 IclR family transcriptional regulator YP_004213576.1 3090502 R 741091 CDS YP_004213577.1 322833550 10213858 3091533..3092930 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2121 major facilitator transporter; major facilitator superfamily protein 3092930 10213858 Rahaq_2847 Rahnella sp. Y9602 major facilitator superfamily protein YP_004213577.1 3091533 D 741091 CDS YP_004213578.1 322833551 10213859 complement(3092987..3093868) 1 NC_015061.1 PFAM: peptidase M48 Ste24p; KEGG: eca:ECA2427 heat shock protein HtpX; peptidase M48 Ste24p 3093868 10213859 Rahaq_2848 Rahnella sp. Y9602 peptidase M48 Ste24p YP_004213578.1 3092987 R 741091 CDS YP_004213579.1 322833552 10213861 complement(3095479..3097551) 1 NC_015061.1 SMART: peptidase S41; PDZ/DHR/GLGF domain protein; TIGRFAM: carboxyl-terminal protease; KEGG: spe:Spro_2119 carboxy-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; carboxyl-terminal protease 3097551 10213861 Rahaq_2850 Rahnella sp. Y9602 carboxyl-terminal protease YP_004213579.1 3095479 R 741091 CDS YP_004213580.1 322833553 10213862 complement(3097571..3098260) 1 NC_015061.1 PFAM: Fertility inhibition FinO-like; KEGG: ypb:YPTS_2452 solute/DNA competence effector; Fertility inhibition FinO-like protein 3098260 10213862 Rahaq_2851 Rahnella sp. Y9602 Fertility inhibition FinO-like protein YP_004213580.1 3097571 R 741091 CDS YP_004213581.1 322833554 10213863 complement(3098356..3098853) 1 NC_015061.1 SMART: GAF domain protein; KEGG: yen:YE1866 hypothetical protein; GAF sensor protein 3098853 10213863 Rahaq_2852 Rahnella sp. Y9602 GAF sensor protein YP_004213581.1 3098356 R 741091 CDS YP_004213582.1 322833555 10213864 3099111..3100358 1 NC_015061.1 KEGG: spe:Spro_2116 PqiA family integral membrane protein; TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A; PqiA family integral membrane protein 3100358 10213864 Rahaq_2853 Rahnella sp. Y9602 PqiA family integral membrane protein YP_004213582.1 3099111 D 741091 CDS YP_004213583.1 322833556 10213865 3100327..3102957 1 NC_015061.1 PFAM: Mammalian cell entry related domain protein; KEGG: yen:YE1864 hypothetical protein; mammalian cell entry domain-containing protein 3102957 10213865 Rahaq_2854 Rahnella sp. Y9602 mammalian cell entry domain-containing protein YP_004213583.1 3100327 D 741091 CDS YP_004213584.1 322833557 10213866 3103042..3104559 1 NC_015061.1 KEGG: spe:Spro_2113 rRNA (cytosine-C(5)-)-methyltransferase RsmF; TIGRFAM: RNA methylase, NOL1/NOP2/sun family; PFAM: Fmu (Sun) domain protein; RNA methylase 3104559 10213866 Rahaq_2855 Rahnella sp. Y9602 RNA methylase YP_004213584.1 3103042 D 741091 CDS YP_004213585.1 322833558 10213867 3104931..3106652 1 NC_015061.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; KEGG: yen:YE1855 hypothetical protein; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase 3106652 10213867 Rahaq_2856 Rahnella sp. Y9602 PAS/PAC sensor-containing diguanylate cyclase YP_004213585.1 3104931 D 741091 CDS YP_004213586.1 322833559 10213868 3106846..3107088 1 NC_015061.1 PFAM: protein of unknown function DUF1480; KEGG: spe:Spro_2106 hypothetical protein; hypothetical protein 3107088 10213868 Rahaq_2857 Rahnella sp. Y9602 hypothetical protein YP_004213586.1 3106846 D 741091 CDS YP_004213587.1 322833560 10213869 complement(3107132..3107782) 1 NC_015061.1 KEGG: spe:Spro_2105 hypothetical protein; hypothetical protein 3107782 10213869 Rahaq_2858 Rahnella sp. Y9602 hypothetical protein YP_004213587.1 3107132 R 741091 CDS YP_004213588.1 322833561 10213870 complement(3107881..3108273) 1 NC_015061.1 PFAM: protein of unknown function DUF437; KEGG: ypb:YPTS_2463 hypothetical protein; hypothetical protein 3108273 10213870 Rahaq_2859 Rahnella sp. Y9602 hypothetical protein YP_004213588.1 3107881 R 741091 CDS YP_004213589.1 322833562 10213871 complement(3108371..3111211) 1 NC_015061.1 KEGG: cyn:Cyan7425_3973 KWG repeat protein; hypothetical protein 3111211 10213871 Rahaq_2860 Rahnella sp. Y9602 hypothetical protein YP_004213589.1 3108371 R 741091 CDS YP_004213590.1 322833563 10213872 complement(3111211..3113973) 1 NC_015061.1 KEGG: cts:Ctha_0023 KWG repeat protein; hypothetical protein 3113973 10213872 Rahaq_2861 Rahnella sp. Y9602 hypothetical protein YP_004213590.1 3111211 R 741091 CDS YP_004213591.1 322833564 10213873 3114490..3114747 1 NC_015061.1 manually curated; KEGG: kva:Kvar_1956 hypothetical protein; hypothetical protein 3114747 10213873 Rahaq_2862 Rahnella sp. Y9602 hypothetical protein YP_004213591.1 3114490 D 741091 CDS YP_004213592.1 322833565 10213874 3115058..3116290 1 NC_015061.1 TIGRFAM: amidohydrolase; KEGG: rsl:RPSI07_mp0230 amidohydrolase; hippurate hydrolase protein (similar to HipO); PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 3116290 10213874 Rahaq_2863 Rahnella sp. Y9602 amidohydrolase YP_004213592.1 3115058 D 741091 CDS YP_004213593.1 322833566 10213875 complement(3116287..3116985) 1 NC_015061.1 PFAM: Extensin family protein; KEGG: eca:ECA2466 hypothetical protein; extensin family protein 3116985 10213875 Rahaq_2864 Rahnella sp. Y9602 extensin family protein YP_004213593.1 3116287 R 741091 CDS YP_004213594.1 322833567 10213876 complement(3117328..3117954) 1 NC_015061.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: eay:EAM_1064 alcohol dehydrogenase, propanol-preferring; alcohol dehydrogenase 3117954 10213876 Rahaq_2865 Rahnella sp. Y9602 alcohol dehydrogenase YP_004213594.1 3117328 R 741091 CDS YP_004213595.1 322833568 10213877 3118554..3120209 1 NC_015061.1 KEGG: ddd:Dda3937_02184 aspartate chemoreceptor protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3120209 10213877 Rahaq_2866 Rahnella sp. Y9602 methyl-accepting chemotaxis sensory transducer YP_004213595.1 3118554 D 741091 CDS YP_004213596.1 322833569 10213879 complement(3121304..3122215) 1 NC_015061.1 KEGG: enc:ECL_A245 cation efflux protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter 3122215 10213879 Rahaq_2868 Rahnella sp. Y9602 cation diffusion facilitator family transporter YP_004213596.1 3121304 R 741091 CDS YP_004213597.1 322833570 10213880 complement(3122306..3122569) 1 NC_015061.1 KEGG: enc:ECL_A246 hypothetical protein; hypothetical protein 3122569 10213880 Rahaq_2869 Rahnella sp. Y9602 hypothetical protein YP_004213597.1 3122306 R 741091 CDS YP_004213598.1 322833571 10213882 3124019..3125410 1 NC_015061.1 PFAM: AAA-4 family protein; KEGG: slo:Shew_1142 transcriptional regulator; transcriptional regulator 3125410 10213882 Rahaq_2871 Rahnella sp. Y9602 transcriptional regulator YP_004213598.1 3124019 D 741091 CDS YP_004213599.1 322833572 10213884 complement(3125682..3126476) 1 NC_015061.1 KEGG: epy:EpC_07540 transposase subunit; manually curated; PFAM: Integrase catalytic region; integrase catalytic subunit 3126476 10213884 Rahaq_2873 Rahnella sp. Y9602 integrase catalytic subunit YP_004213599.1 3125682 R 741091 CDS YP_004213600.1 322833573 10213885 complement(3126527..3126793) 1 NC_015061.1 PFAM: transposase IS3/IS911 family protein; KEGG: ent:Ent638_4321 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 3126793 10213885 Rahaq_2874 Rahnella sp. Y9602 transposase IS3/IS911 family protein YP_004213600.1 3126527 R 741091 CDS YP_004213601.1 322833574 10213888 complement(3127590..3128003) 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bph:Bphy_4755 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3128003 10213888 Rahaq_2877 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004213601.1 3127590 R 741091 CDS YP_004213602.1 322833575 10213890 complement(3128413..3128778) 1 NC_015061.1 KEGG: pam:PANA_3394 hypothetical protein; hypothetical protein 3128778 10213890 Rahaq_2879 Rahnella sp. Y9602 hypothetical protein YP_004213602.1 3128413 R 741091 CDS YP_004213603.1 322833576 10213892 complement(3129510..3129845) 1 NC_015061.1 PFAM: Protein of unknown function DUF2511; KEGG: dze:Dd1591_2234 hypothetical protein; hypothetical protein 3129845 10213892 Rahaq_2881 Rahnella sp. Y9602 hypothetical protein YP_004213603.1 3129510 R 741091 CDS YP_004213604.1 322833577 10213893 complement(3129896..3130780) 1 NC_015061.1 KEGG: spe:Spro_1944 copper resistance D domain-containing protein; copper resistance D domain-containing protein 3130780 10213893 Rahaq_2882 Rahnella sp. Y9602 copper resistance D domain-containing protein YP_004213604.1 3129896 R 741091 CDS YP_004213605.1 322833578 10213894 complement(3130784..3131167) 1 NC_015061.1 PFAM: copper resistance protein CopC; KEGG: ypb:YPTS_1785 copper resistance protein CopC; copper resistance protein CopC 3131167 10213894 Rahaq_2883 Rahnella sp. Y9602 copper resistance protein CopC YP_004213605.1 3130784 R 741091 CDS YP_004213606.1 322833579 10213895 complement(3131309..3131815) 1 NC_015061.1 KEGG: dze:Dd1591_2236 ferroxidase; PFAM: Ferritin Dps family protein; ferroxidase 3131815 10213895 Rahaq_2884 Rahnella sp. Y9602 ferroxidase YP_004213606.1 3131309 R 741091 CDS YP_004213607.1 322833580 10213896 3132222..3132452 1 NC_015061.1 PFAM: DNA polymerase II subunit beta; KEGG: spe:Spro_1941 DNA polymerase III subunit theta; DNA polymerase II subunit beta 3132452 10213896 Rahaq_2885 Rahnella sp. Y9602 DNA polymerase II subunit beta YP_004213607.1 3132222 D 741091 CDS YP_004213608.1 322833581 10213897 complement(3132472..3133428) 1 NC_015061.1 KEGG: spe:Spro_1940 proline iminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold; proline iminopeptidase 3133428 10213897 Rahaq_2886 Rahnella sp. Y9602 proline iminopeptidase YP_004213608.1 3132472 R 741091 CDS YP_004213609.1 322833582 10213898 3133706..3133807 1 NC_015061.1 KEGG: ypb:YPTS_1781 hypothetical protein; hypothetical protein 3133807 10213898 Rahaq_2887 Rahnella sp. Y9602 hypothetical protein YP_004213609.1 3133706 D 741091 CDS YP_004213610.1 322833583 10213899 complement(3133925..3135964) 1 NC_015061.1 KEGG: spe:Spro_1937 oligopeptidase B; PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; oligopeptidase B 3135964 10213899 Rahaq_2888 Rahnella sp. Y9602 oligopeptidase B YP_004213610.1 3133925 R 741091 CDS YP_004213611.1 322833584 10213900 complement(3136096..3136461) 1 NC_015061.1 KEGG: spe:Spro_2801 hypothetical protein; hypothetical protein 3136461 10213900 Rahaq_2889 Rahnella sp. Y9602 hypothetical protein YP_004213611.1 3136096 R 741091 CDS YP_004213612.1 322833585 10213901 complement(3136623..3138005) 1 NC_015061.1 KEGG: ypy:YPK_2446 ATP-dependent RNA helicase DbpA; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase 3138005 10213901 Rahaq_2890 Rahnella sp. Y9602 DEAD/DEAH box helicase YP_004213612.1 3136623 R 741091 CDS YP_004213613.1 322833586 10213902 3138256..3139434 1 NC_015061.1 TIGRFAM: phosphoribosylglycinamide formyltransferase 2; KEGG: spe:Spro_2805 phosphoribosylglycinamide formyltransferase 2; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; phosphoribosylglycinamide formyltransferase 2 3139434 10213902 Rahaq_2891 Rahnella sp. Y9602 phosphoribosylglycinamide formyltransferase 2 YP_004213613.1 3138256 D 741091 CDS YP_004213614.1 322833587 10213903 complement(3139524..3139706) 1 NC_015061.1 PFAM: protein of unknown function UPF0181; KEGG: spe:Spro_2806 hypothetical protein; hypothetical protein 3139706 10213903 Rahaq_2892 Rahnella sp. Y9602 hypothetical protein YP_004213614.1 3139524 R 741091 CDS YP_004213615.1 322833588 10213904 3139868..3141244 1 NC_015061.1 KEGG: dze:Dd1591_1987 para-aminobenzoate synthase, subunit I; TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; para-aminobenzoate synthase subunit I 3141244 10213904 Rahaq_2893 Rahnella sp. Y9602 para-aminobenzoate synthase subunit I YP_004213615.1 3139868 D 741091 CDS YP_004213616.1 322833589 10213905 3141241..3141843 1 NC_015061.1 PFAM: NUDIX hydrolase; KEGG: yen:YE1780 hypothetical protein; NUDIX hydrolase 3141843 10213905 Rahaq_2894 Rahnella sp. Y9602 NUDIX hydrolase YP_004213616.1 3141241 D 741091 CDS YP_004213617.1 322833590 10213906 3142051..3143415 1 NC_015061.1 TIGRFAM: L-serine dehydratase 1; KEGG: spe:Spro_2810 L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 3143415 10213906 Rahaq_2895 Rahnella sp. Y9602 L-serine dehydratase 1 YP_004213617.1 3142051 D 741091 CDS YP_004213618.1 322833591 10213907 3143871..3145463 1 NC_015061.1 KEGG: spe:Spro_2811 EAL domain-containing protein; PFAM: EAL domain protein; SMART: EAL domain protein; diguanylate phosphodiesterase 3145463 10213907 Rahaq_2896 Rahnella sp. Y9602 diguanylate phosphodiesterase YP_004213618.1 3143871 D 741091 CDS YP_004213619.1 322833592 10213908 complement(3145540..3147099) 1 NC_015061.1 PFAM: Integral membrane protein TerC; CBS domain containing protein; transporter-associated region; KEGG: ypb:YPTS_1759 integral membrane protein TerC; integral membrane protein TerC 3147099 10213908 Rahaq_2897 Rahnella sp. Y9602 integral membrane protein TerC YP_004213619.1 3145540 R 741091 CDS YP_004213620.1 322833593 10213909 3147691..3148653 1 NC_015061.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB subunit; PTS system, mannose/fructose/sorbose family, IIA subunit; KEGG: spe:Spro_2813 PTS system mannose/fructose/sorbose family transporter subunit IIB; PFAM: PTS system sorbose subfamily IIB component; PTS system fructose subfamily IIA component; PTS system mannose/fructose/sorbose family transporter subunit IIB 3148653 10213909 Rahaq_2898 Rahnella sp. Y9602 PTS system mannose/fructose/sorbose family transporter subunit IIB YP_004213620.1 3147691 D 741091 CDS YP_004213621.1 322833594 10213910 3148744..3149541 1 NC_015061.1 KEGG: pam:PANA_2146 ManY; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIC subunit; PFAM: phosphotransferase system PTS sorbose-specific IIC subunit; PTS system mannose/fructose/sorbose family transporter subunit IIC 3149541 10213910 Rahaq_2899 Rahnella sp. Y9602 PTS system mannose/fructose/sorbose family transporter subunit IIC YP_004213621.1 3148744 D 741091 CDS YP_004213622.1 322833595 10213911 3149553..3150395 1 NC_015061.1 KEGG: spe:Spro_2815 PTS system mannose-specific transporter subunit IID; TIGRFAM: PTS system, mannose/fructose/sorbose family, IID subunit; PFAM: PTS system mannose/fructose/sorbose family IID component; PTS system mannose/fructose/sorbose family transporter subunit IID 3150395 10213911 Rahaq_2900 Rahnella sp. Y9602 PTS system mannose/fructose/sorbose family transporter subunit IID YP_004213622.1 3149553 D 741091 CDS YP_004213623.1 322833596 10213912 3150502..3150960 1 NC_015061.1 PFAM: protein of unknown function DUF986; KEGG: yen:YE1773 hypothetical protein; hypothetical protein 3150960 10213912 Rahaq_2901 Rahnella sp. Y9602 hypothetical protein YP_004213623.1 3150502 D 741091 CDS YP_004213624.1 322833597 10213913 3151156..3151743 1 NC_015061.1 PFAM: protein of unknown function DUF204; KEGG: spe:Spro_2817 hypothetical protein; hypothetical protein 3151743 10213913 Rahaq_2902 Rahnella sp. Y9602 hypothetical protein YP_004213624.1 3151156 D 741091 CDS YP_004213625.1 322833598 10213914 complement(3151735..3152556) 1 NC_015061.1 KEGG: ypb:YPTS_1749 23S rRNA methyltransferase A; PFAM: methyltransferase type 11; rRNA (guanine-N(1)-)-methyltransferase 3152556 10213914 Rahaq_2903 Rahnella sp. Y9602 rRNA (guanine-N(1)-)-methyltransferase YP_004213625.1 3151735 R 741091 CDS YP_004213626.1 322833599 10213915 3152704..3153405 1 NC_015061.1 PFAM: protein of unknown function DUF152; KEGG: spe:Spro_2821 hypothetical protein; hypothetical protein 3153405 10213915 Rahaq_2904 Rahnella sp. Y9602 hypothetical protein YP_004213626.1 3152704 D 741091 CDS YP_004213627.1 322833600 10213916 complement(3153465..3153674) 1 NC_015061.1 KEGG: spe:Spro_2822 cold shock-like protein CspC; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock protein 3153674 10213916 Rahaq_2905 Rahnella sp. Y9602 cold-shock protein YP_004213627.1 3153465 R 741091 CDS YP_004213628.1 322833601 10213917 complement(3154956..3155945) 1 NC_015061.1 KEGG: spe:Spro_2823 beta-lactamase domain-containing protein; beta-lactamase domain-containing protein 3155945 10213917 Rahaq_2906 Rahnella sp. Y9602 beta-lactamase domain-containing protein YP_004213628.1 3154956 R 741091 CDS YP_004213629.1 322833602 10213918 3156133..3156423 1 NC_015061.1 KEGG: spe:Spro_2824 hypothetical protein; hypothetical protein 3156423 10213918 Rahaq_2907 Rahnella sp. Y9602 hypothetical protein YP_004213629.1 3156133 D 741091 CDS YP_004213630.1 322833603 10213919 complement(3156484..3156720) 1 NC_015061.1 KEGG: yen:YE1760 hypothetical protein; hypothetical protein 3156720 10213919 Rahaq_2908 Rahnella sp. Y9602 hypothetical protein YP_004213630.1 3156484 R 741091 CDS YP_004213631.1 322833604 10213920 complement(3156856..3157158) 1 NC_015061.1 KEGG: ypb:YPTS_1741 hypothetical protein; hypothetical protein 3157158 10213920 Rahaq_2909 Rahnella sp. Y9602 hypothetical protein YP_004213631.1 3156856 R 741091 CDS YP_004213632.1 322833605 10213921 complement(3157308..3157580) 1 NC_015061.1 KEGG: spe:Spro_2828 hypothetical protein; hypothetical protein 3157580 10213921 Rahaq_2910 Rahnella sp. Y9602 hypothetical protein YP_004213632.1 3157308 R 741091 CDS YP_004213633.1 322833606 10213922 3158639..3161332 1 NC_015061.1 KEGG: esa:ESA_02934 hypothetical protein; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; outer membrane autotransporter barrel domain-containing protein 3161332 10213922 Rahaq_2911 Rahnella sp. Y9602 outer membrane autotransporter barrel domain-containing protein YP_004213633.1 3158639 D 741091 CDS YP_004213634.1 322833607 10213923 3161516..3161752 1 NC_015061.1 KEGG: spe:Spro_2830 hypothetical protein; hypothetical protein 3161752 10213923 Rahaq_2912 Rahnella sp. Y9602 hypothetical protein YP_004213634.1 3161516 D 741091 CDS YP_004213635.1 322833608 10213924 complement(3161816..3162061) 1 NC_015061.1 KEGG: ypb:YPTS_1738 hypothetical protein; hypothetical protein 3162061 10213924 Rahaq_2913 Rahnella sp. Y9602 hypothetical protein YP_004213635.1 3161816 R 741091 CDS YP_004213636.1 322833609 10213925 3162263..3162454 1 NC_015061.1 PFAM: protein of unknown function DUF1482; KEGG: ctu:Ctu_25200 uncharacterized protein YebW; hypothetical protein 3162454 10213925 Rahaq_2914 Rahnella sp. Y9602 hypothetical protein YP_004213636.1 3162263 D 741091 CDS YP_004213637.1 322833610 10213926 3162582..3164222 1 NC_015061.1 PFAM: extracellular solute-binding protein family 5; KEGG: enc:ECL_02675 extracellular solute-binding protein; family 5 extracellular solute-binding protein 3164222 10213926 Rahaq_2915 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004213637.1 3162582 D 741091 CDS YP_004213638.1 322833611 10213927 3164362..3164577 1 NC_015061.1 KEGG: spe:Spro_2101 hypothetical protein; hypothetical protein 3164577 10213927 Rahaq_2916 Rahnella sp. Y9602 hypothetical protein YP_004213638.1 3164362 D 741091 CDS YP_004213639.1 322833612 10213928 complement(3164646..3164933) 1 NC_015061.1 KEGG: spe:Spro_1864 hypothetical protein; hypothetical protein 3164933 10213928 Rahaq_2917 Rahnella sp. Y9602 hypothetical protein YP_004213639.1 3164646 R 741091 CDS YP_004213640.1 322833613 10213929 complement(3165617..3166126) 1 NC_015061.1 KEGG: kva:Kvar_2271 hypothetical protein; hypothetical protein 3166126 10213929 Rahaq_2918 Rahnella sp. Y9602 hypothetical protein YP_004213640.1 3165617 R 741091 CDS YP_004213641.1 322833614 10213930 complement(3166468..3167721) 1 NC_015061.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; KEGG: spe:Spro_2025 isocitrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; isocitrate dehydrogenase 3167721 10213930 Rahaq_2919 Rahnella sp. Y9602 isocitrate dehydrogenase YP_004213641.1 3166468 R 741091 CDS YP_004213642.1 322833615 10213931 3167854..3168480 1 NC_015061.1 PFAM: pseudouridine synthase; KEGG: yen:YE1724 pseudouridine synthase; pseudouridine synthase 3168480 10213931 Rahaq_2920 Rahnella sp. Y9602 pseudouridine synthase YP_004213642.1 3167854 D 741091 CDS YP_004213643.1 322833616 10213932 3168473..3168919 1 NC_015061.1 PFAM: NUDIX hydrolase; KEGG: eum:ECUMN_1378 bifunctional thiamin pyrimidine pyrophosphate hydrolase and thiamin pyrophosphate hydrolase; NUDIX hydrolase 3168919 10213932 Rahaq_2921 Rahnella sp. Y9602 NUDIX hydrolase YP_004213643.1 3168473 D 741091 CDS YP_004213644.1 322833617 10213933 3169156..3170265 1 NC_015061.1 TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: ctu:Ctu_17100 tRNA-specific 2-thiouridylase MnmA; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase 3170265 10213933 Rahaq_2922 Rahnella sp. Y9602 tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase YP_004213644.1 3169156 D 741091 CDS YP_004213645.1 322833618 10213934 3170456..3171082 1 NC_015061.1 PFAM: protein of unknown function DUF489; KEGG: ypk:y1798 hypothetical protein; hypothetical protein 3171082 10213934 Rahaq_2923 Rahnella sp. Y9602 hypothetical protein YP_004213645.1 3170456 D 741091 CDS YP_004213646.1 322833619 10213935 3171106..3172476 1 NC_015061.1 KEGG: ypb:YPTS_2515 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase domain-containing protein; adenylosuccinate lyase 3172476 10213935 Rahaq_2924 Rahnella sp. Y9602 adenylosuccinate lyase YP_004213646.1 3171106 D 741091 CDS YP_004213647.1 322833620 10213936 complement(3172522..3173844) 1 NC_015061.1 PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein; transposase IS4 family protein 3173844 10213936 Rahaq_2925 Rahnella sp. Y9602 transposase IS4 family protein YP_004213647.1 3172522 R 741091 CDS YP_004213648.1 322833621 10213937 3173861..3175015 1 NC_015061.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ddd:Dda3937_04456 transposase; transposase IS116/IS110/IS902 family protein 3175015 10213937 Rahaq_2926 Rahnella sp. Y9602 transposase IS116/IS110/IS902 family protein YP_004213648.1 3173861 D 741091 CDS YP_004213649.1 322833622 10213938 3175458..3176132 1 NC_015061.1 KEGG: spe:Spro_2013 DNA-binding transcriptional regulator PhoP; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator 3176132 10213938 Rahaq_2927 Rahnella sp. Y9602 transcriptional regulator YP_004213649.1 3175458 D 741091 CDS YP_004213650.1 322833623 10213939 3176159..3177616 1 NC_015061.1 KEGG: spe:Spro_2012 sensor protein PhoQ; PFAM: PhoQ Sensor domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 3177616 10213939 Rahaq_2928 Rahnella sp. Y9602 integral membrane sensor signal transduction histidine kinase YP_004213650.1 3176159 D 741091 CDS YP_004213651.1 322833624 10213940 3177777..3178898 1 NC_015061.1 SMART: transcription factor jumonji jmjC domain-containing protein; KEGG: spe:Spro_2011 cupin 4 family protein; transcription factor jumonji jmjC domain-containing protein 3178898 10213940 Rahaq_2929 Rahnella sp. Y9602 transcription factor jumonji jmjC domain-containing protein YP_004213651.1 3177777 D 741091 CDS YP_004213652.1 322833625 10213941 complement(3179971..3181005) 1 NC_015061.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ppr:PBPRB1640 hypothetical protein; transposase IS116/IS110/IS902 family protein 3181005 10213941 Rahaq_2930 Rahnella sp. Y9602 transposase IS116/IS110/IS902 family protein YP_004213652.1 3179971 R 741091 CDS YP_004213653.1 322833626 10213942 complement(3181186..3181812) 1 NC_015061.1 KEGG: cro:ROD_40891 hypothetical protein; hypothetical protein 3181812 10213942 Rahaq_2931 Rahnella sp. Y9602 hypothetical protein YP_004213653.1 3181186 R 741091 CDS YP_004213654.1 322833627 10213943 complement(3182013..3183242) 1 NC_015061.1 TIGRFAM: peptidase T; KEGG: ypy:YPK_1712 peptidase T; PFAM: peptidase dimerisation domain protein; peptidase M20; peptidase T 3183242 10213943 Rahaq_2932 Rahnella sp. Y9602 peptidase T YP_004213654.1 3182013 R 741091 CDS YP_004213655.1 322833628 10213944 complement(3183389..3184216) 1 NC_015061.1 PFAM: Silent information regulator protein Sir2; KEGG: spe:Spro_2005 NAD-dependent deacetylase; silent information regulator protein Sir2 3184216 10213944 Rahaq_2933 Rahnella sp. Y9602 silent information regulator protein Sir2 YP_004213655.1 3183389 R 741091 CDS YP_004213656.1 322833629 10213945 complement(3184267..3185517) 1 NC_015061.1 KEGG: spe:Spro_2003 outer membrane-specific lipoprotein transporter subunit LolE; TIGRFAM: lipoprotein releasing system, transmembrane protein LolE; lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; lipoprotein releasing system, transmembrane protein LolE 3185517 10213945 Rahaq_2934 Rahnella sp. Y9602 lipoprotein releasing system, transmembrane protein LolE YP_004213656.1 3184267 R 741091 CDS YP_004213657.1 322833630 10213946 complement(3185517..3186221) 1 NC_015061.1 TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; KEGG: spe:Spro_2002 lipoprotein transporter ATP-binding subunit; SMART: AAA ATPase; lipoprotein releasing system, ATP-binding protein 3186221 10213946 Rahaq_2935 Rahnella sp. Y9602 lipoprotein releasing system, ATP-binding protein YP_004213657.1 3185517 R 741091 CDS YP_004213658.1 322833631 10213947 complement(3186214..3187416) 1 NC_015061.1 manually curated; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; KEGG: sdy:SDY_2034 outer membrane-specific lipoprotein transporter subunit LolC; PFAM: protein of unknown function DUF214; lipoprotein releasing system transmembrane protein LolC/E family 3187416 10213947 Rahaq_2936 Rahnella sp. Y9602 lipoprotein releasing system transmembrane protein LolC/E family YP_004213658.1 3186214 R 741091 CDS YP_004213659.1 322833632 10213948 3187655..3191098 1 NC_015061.1 TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; DEAD/DEAH box helicase domain protein; helicase domain protein; TRCF domain protein; KEGG: spe:Spro_1998 transcription-repair coupling factor; SMART: DEAD-like helicase ; helicase domain protein; transcription-repair coupling factor 3191098 10213948 Rahaq_2937 Rahnella sp. Y9602 transcription-repair coupling factor YP_004213659.1 3187655 D 741091 CDS YP_004213660.1 322833633 10213949 complement(3191173..3191709) 1 NC_015061.1 KEGG: pwa:Pecwa_2791 hypothetical protein; hypothetical protein 3191709 10213949 Rahaq_2938 Rahnella sp. Y9602 hypothetical protein YP_004213660.1 3191173 R 741091 CDS YP_004213661.1 322833634 10213950 complement(3192068..3193372) 1 NC_015061.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ypb:YPTS_2531 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3193372 10213950 Rahaq_2939 Rahnella sp. Y9602 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004213661.1 3192068 R 741091 CDS YP_004213662.1 322833635 10213951 complement(3193695..3194237) 1 NC_015061.1 PFAM: protein of unknown function UPF0227; KEGG: spe:Spro_1925 hypothetical protein; hypothetical protein 3194237 10213951 Rahaq_2940 Rahnella sp. Y9602 hypothetical protein YP_004213662.1 3193695 R 741091 CDS YP_004213663.1 322833636 10213952 complement(3194290..3195318) 1 NC_015061.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: spe:Spro_1924 beta-hexosaminidase; glycoside hydrolase 3195318 10213952 Rahaq_2941 Rahnella sp. Y9602 glycoside hydrolase YP_004213663.1 3194290 R 741091 CDS YP_004213664.1 322833637 10213953 complement(3195367..3196224) 1 NC_015061.1 KEGG: spe:Spro_1923 thiamine kinase; PFAM: aminoglycoside phosphotransferase; Thiamine kinase 3196224 10213953 Rahaq_2942 Rahnella sp. Y9602 Thiamine kinase YP_004213664.1 3195367 R 741091 CDS YP_004213665.1 322833638 10213954 complement(3196208..3196810) 1 NC_015061.1 TIGRFAM: membrane lipoprotein lipid attachment site; KEGG: spe:Spro_1922 membrane lipoprotein lipid attachment site; membrane lipoprotein lipid attachment site 3196810 10213954 Rahaq_2943 Rahnella sp. Y9602 membrane lipoprotein lipid attachment site YP_004213665.1 3196208 R 741091 CDS YP_004213666.1 322833639 10213955 complement(3196832..3197200) 1 NC_015061.1 PFAM: protein of unknown function DUF1425; KEGG: spe:Spro_1921 hypothetical protein; hypothetical protein 3197200 10213955 Rahaq_2944 Rahnella sp. Y9602 hypothetical protein YP_004213666.1 3196832 R 741091 CDS YP_004213667.1 322833640 10213956 complement(3197209..3197562) 1 NC_015061.1 PFAM: histidine triad (HIT) protein; KEGG: spe:Spro_1920 histidine triad (HIT) protein; histidine triad (HIT) protein 3197562 10213956 Rahaq_2945 Rahnella sp. Y9602 histidine triad (HIT) protein YP_004213667.1 3197209 R 741091 CDS YP_004213668.1 322833641 10213957 complement(3197982..3198986) 1 NC_015061.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ddd:Dda3937_00500 ISEch4 transposase; transposase IS116/IS110/IS902 family protein 3198986 10213957 Rahaq_2946 Rahnella sp. Y9602 transposase IS116/IS110/IS902 family protein YP_004213668.1 3197982 R 741091 CDS YP_004213669.1 322833642 10213958 complement(3199102..3200535) 1 NC_015061.1 TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, maltose and glucose-specific subfamily, IIC subunit; PTS system, glucose-like IIB subunint; KEGG: spe:Spro_1914 PTS system glucose-specific transporter subunits IIBC; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; PTS system glucose-specific transporter subunit IIBC 3200535 10213958 Rahaq_2947 Rahnella sp. Y9602 PTS system glucose-specific transporter subunit IIBC YP_004213669.1 3199102 R 741091 CDS YP_004213670.1 322833643 10213959 complement(3200868..3201668) 1 NC_015061.1 KEGG: ypb:YPTS_2552 metallodependent hydrolase; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; TatD family hydrolase 3201668 10213959 Rahaq_2948 Rahnella sp. Y9602 TatD family hydrolase YP_004213670.1 3200868 R 741091 CDS YP_004213671.1 322833644 10213960 complement(3201710..3202729) 1 NC_015061.1 KEGG: spe:Spro_1912 DNA polymerase III subunit delta'; TIGRFAM: DNA polymerase III, delta prime subunit; PFAM: DNA polymerase III subunit delta; DNA polymerase III subunit delta' 3202729 10213960 Rahaq_2949 Rahnella sp. Y9602 DNA polymerase III subunit delta' YP_004213671.1 3201710 R 741091 CDS YP_004213672.1 322833645 10213961 complement(3202726..3203376) 1 NC_015061.1 TIGRFAM: thymidylate kinase; KEGG: spe:Spro_1911 thymidylate kinase; PFAM: thymidylate kinase; thymidylate kinase 3203376 10213961 Rahaq_2950 Rahnella sp. Y9602 thymidylate kinase YP_004213672.1 3202726 R 741091 CDS YP_004213673.1 322833646 10213962 complement(3203366..3204391) 1 NC_015061.1 PFAM: aminodeoxychorismate lyase; KEGG: yen:YE1639 hypothetical protein; aminodeoxychorismate lyase 3204391 10213962 Rahaq_2951 Rahnella sp. Y9602 aminodeoxychorismate lyase YP_004213673.1 3203366 R 741091 CDS YP_004213674.1 322833647 10213963 complement(3204409..3205206) 1 NC_015061.1 KEGG: yen:YE1638 4-amino-4-deoxychorismate lyase; TIGRFAM: aminodeoxychorismate lyase; PFAM: aminotransferase class IV; aminodeoxychorismate lyase 3205206 10213963 Rahaq_2952 Rahnella sp. Y9602 aminodeoxychorismate lyase YP_004213674.1 3204409 R 741091 CDS YP_004213675.1 322833648 10213964 complement(3205433..3206674) 1 NC_015061.1 KEGG: dda:Dd703_1589 3-oxoacyl-(acyl carrier protein) synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; 3-oxoacyl-ACP synthase 3206674 10213964 Rahaq_2953 Rahnella sp. Y9602 3-oxoacyl-ACP synthase YP_004213675.1 3205433 R 741091 CDS YP_004213676.1 322833649 10213966 complement(3207166..3207900) 1 NC_015061.1 KEGG: eca:ECA1797 3-ketoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 3207900 10213966 Rahaq_2955 Rahnella sp. Y9602 3-oxoacyl-ACP reductase YP_004213676.1 3207166 R 741091 CDS YP_004213677.1 322833650 10213967 complement(3207914..3208843) 1 NC_015061.1 KEGG: spe:Spro_1905 malonyl CoA-acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; malonyl CoA-acyl carrier protein transacylase 3208843 10213967 Rahaq_2956 Rahnella sp. Y9602 malonyl CoA-acyl carrier protein transacylase YP_004213677.1 3207914 R 741091 CDS YP_004213678.1 322833651 10213968 complement(3208862..3209815) 1 NC_015061.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; manually curated; KEGG: spe:Spro_1904 3-oxoacyl-(acyl carrier protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; 3-oxoacyl-ACP synthase 3209815 10213968 Rahaq_2957 Rahnella sp. Y9602 3-oxoacyl-ACP synthase YP_004213678.1 3208862 R 741091 CDS YP_004213679.1 322833652 10213969 complement(3209822..3210856) 1 NC_015061.1 manually curated; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; KEGG: yen:YE1632 glycerol-3-phosphate acyltransferase PlsX; PFAM: fatty acid synthesis plsX protein; fatty acid/phospholipid synthesis protein PlsX 3210856 10213969 Rahaq_2958 Rahnella sp. Y9602 fatty acid/phospholipid synthesis protein PlsX YP_004213679.1 3209822 R 741091 CDS YP_004213680.1 322833653 10213970 complement(3210905..3211072) 1 NC_015061.1 KEGG: yen:YE1631 50S ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; 50S ribosomal protein L32 3211072 10213970 Rahaq_2959 Rahnella sp. Y9602 50S ribosomal protein L32 YP_004213680.1 3210905 R 741091 CDS YP_004213681.1 322833654 10213971 complement(3211085..3211609) 1 NC_015061.1 PFAM: protein of unknown function DUF177; KEGG: yen:YE1630 hypothetical protein; hypothetical protein 3211609 10213971 Rahaq_2960 Rahnella sp. Y9602 hypothetical protein YP_004213681.1 3211085 R 741091 CDS YP_004213682.1 322833655 10213972 3211752..3212345 1 NC_015061.1 KEGG: dda:Dd703_1581 maf protein; TIGRFAM: maf protein; PFAM: Maf family protein; maf protein 3212345 10213972 Rahaq_2961 Rahnella sp. Y9602 maf protein YP_004213682.1 3211752 D 741091 CDS YP_004213683.1 322833656 10213973 complement(3212395..3213357) 1 NC_015061.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: spe:Spro_1899 23S rRNA pseudouridylate synthase C; SMART: RNA-binding S4 domain protein; pseudouridine synthase 3213357 10213973 Rahaq_2962 Rahnella sp. Y9602 pseudouridine synthase YP_004213683.1 3212395 R 741091 CDS YP_004213684.1 322833657 10213974 3213958..3217242 1 NC_015061.1 KEGG: spe:Spro_1898 ribonuclease E; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein; ribonuclease, Rne/Rng family 3217242 10213974 Rahaq_2963 Rahnella sp. Y9602 ribonuclease, Rne/Rng family YP_004213684.1 3213958 D 741091 CDS YP_004213685.1 322833658 10213975 complement(3217316..3217603) 1 NC_015061.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: yen:YE1626 hypothetical protein; antibiotic biosynthesis monooxygenase 3217603 10213975 Rahaq_2964 Rahnella sp. Y9602 antibiotic biosynthesis monooxygenase YP_004213685.1 3217316 R 741091 CDS YP_004213686.1 322833659 10213976 complement(3217675..3217776) 1 NC_015061.1 hypothetical protein 3217776 10213976 Rahaq_2965 Rahnella sp. Y9602 hypothetical protein YP_004213686.1 3217675 R 741091 CDS YP_004213687.1 322833660 10213977 3217827..3218876 1 NC_015061.1 TIGRFAM: dihydroorotase, homodimeric type; KEGG: yen:YE1625 dihydroorotase; PFAM: amidohydrolase; dihydroorotase, homodimeric type 3218876 10213977 Rahaq_2966 Rahnella sp. Y9602 dihydroorotase, homodimeric type YP_004213687.1 3217827 D 741091 CDS YP_004213688.1 322833661 10213978 3218958..3219212 1 NC_015061.1 PFAM: DinI family protein; KEGG: spe:Spro_1895 DNA damage-inducible protein I; DinI family protein 3219212 10213978 Rahaq_2967 Rahnella sp. Y9602 DinI family protein YP_004213688.1 3218958 D 741091 CDS YP_004213689.1 322833662 10213979 3219559..3219813 1 NC_015061.1 KEGG: spe:Spro_1893 biofilm formation regulatory protein BssS; biofilm formation regulatory protein BssS 3219813 10213979 Rahaq_2968 Rahnella sp. Y9602 biofilm formation regulatory protein BssS YP_004213689.1 3219559 D 741091 CDS YP_004213690.1 322833663 10213980 3219958..3221073 1 NC_015061.1 KEGG: ctu:Ctu_16360 N-methyltryptophan oxidase; PFAM: FAD dependent oxidoreductase; sarcosine oxidase 3221073 10213980 Rahaq_2969 Rahnella sp. Y9602 sarcosine oxidase YP_004213690.1 3219958 D 741091 CDS YP_004213691.1 322833664 10213981 3221274..3221942 1 NC_015061.1 KEGG: ypy:YPK_1671 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; LuxR family transcriptional regulator 3221942 10213981 Rahaq_2970 Rahnella sp. Y9602 LuxR family transcriptional regulator YP_004213691.1 3221274 D 741091 CDS YP_004213692.1 322833665 10213982 3221990..3222196 1 NC_015061.1 hypothetical protein 3222196 10213982 Rahaq_2971 Rahnella sp. Y9602 hypothetical protein YP_004213692.1 3221990 D 741091 CDS YP_004213693.1 322833666 10213983 complement(3222236..3223279) 1 NC_015061.1 PFAM: protein of unknown function UPF0118; KEGG: spe:Spro_1889 transport protein; hypothetical protein 3223279 10213983 Rahaq_2972 Rahnella sp. Y9602 hypothetical protein YP_004213693.1 3222236 R 741091 CDS YP_004213694.1 322833667 10213984 complement(3223309..3226404) 1 NC_015061.1 KEGG: yen:YE3595 integral membrane efflux protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 3226404 10213984 Rahaq_2973 Rahnella sp. Y9602 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_004213694.1 3223309 R 741091 CDS YP_004213695.1 322833668 10213985 complement(3226414..3227556) 1 NC_015061.1 KEGG: yen:YE3596 drug efflux protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 3227556 10213985 Rahaq_2974 Rahnella sp. Y9602 RND family efflux transporter MFP subunit YP_004213695.1 3226414 R 741091 CDS YP_004213696.1 322833669 10213986 3228112..3228657 1 NC_015061.1 KEGG: pwa:Pecwa_2822 cytochrome b561; cytochrome b561 3228657 10213986 Rahaq_2975 Rahnella sp. Y9602 cytochrome b561 YP_004213696.1 3228112 D 741091 CDS YP_004213697.1 322833670 10213987 3228719..3229297 1 NC_015061.1 PFAM: YceI family protein; KEGG: spe:Spro_1887 YceI family protein; hypothetical protein 3229297 10213987 Rahaq_2976 Rahnella sp. Y9602 hypothetical protein YP_004213697.1 3228719 D 741091 CDS YP_004213698.1 322833671 10213988 complement(3229365..3230420) 1 NC_015061.1 KEGG: spe:Spro_1886 hypothetical protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; rhodanese domain-containing protein 3230420 10213988 Rahaq_2977 Rahnella sp. Y9602 rhodanese domain-containing protein YP_004213698.1 3229365 R 741091 CDS YP_004213699.1 322833672 10213989 3230649..3231746 1 NC_015061.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: ebi:EbC_16170 NADH-dependent flavin oxidoreductase; NADH:flavin oxidoreductase 3231746 10213989 Rahaq_2978 Rahnella sp. Y9602 NADH:flavin oxidoreductase YP_004213699.1 3230649 D 741091 CDS YP_004213700.1 322833673 10213990 3232123..3233058 1 NC_015061.1 KEGG: spe:Spro_1884 lipid A biosynthesis lauroyl acyltransferase; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: lipid A biosynthesis acyltransferase; lipid A biosynthesis lauroyl acyltransferase 3233058 10213990 Rahaq_2979 Rahnella sp. Y9602 lipid A biosynthesis lauroyl acyltransferase YP_004213700.1 3232123 D 741091 CDS YP_004213701.1 322833674 10213991 3233270..3233704 1 NC_015061.1 PFAM: DoxX family protein; KEGG: yen:YE1611 hypothetical protein; DoxX family protein 3233704 10213991 Rahaq_2980 Rahnella sp. Y9602 DoxX family protein YP_004213701.1 3233270 D 741091 CDS YP_004213702.1 322833675 10213992 3233969..3235207 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE1610 MFS family transporter; major facilitator superfamily protein 3235207 10213992 Rahaq_2981 Rahnella sp. Y9602 major facilitator superfamily protein YP_004213702.1 3233969 D 741091 CDS YP_004213703.1 322833676 10213993 complement(3235235..3235591) 1 NC_015061.1 KEGG: spe:Spro_1002 hypothetical protein; hypothetical protein 3235591 10213993 Rahaq_2982 Rahnella sp. Y9602 hypothetical protein YP_004213703.1 3235235 R 741091 CDS YP_004213704.1 322833677 10213994 complement(3235722..3236120) 1 NC_015061.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: spe:Spro_1880 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase 3236120 10213994 Rahaq_2983 Rahnella sp. Y9602 Glyoxalase/bleomycin resistance protein/dioxygenase YP_004213704.1 3235722 R 741091 CDS YP_004213705.1 322833678 10213995 3236335..3236742 1 NC_015061.1 KEGG: spe:Spro_1874 hypothetical protein; hypothetical protein 3236742 10213995 Rahaq_2984 Rahnella sp. Y9602 hypothetical protein YP_004213705.1 3236335 D 741091 CDS YP_004213706.1 322833679 10213996 complement(3236749..3236994) 1 NC_015061.1 PFAM: protein of unknown function DUF1375; KEGG: spe:Spro_1872 hypothetical protein; hypothetical protein 3236994 10213996 Rahaq_2985 Rahnella sp. Y9602 hypothetical protein YP_004213706.1 3236749 R 741091 CDS YP_004213707.1 322833680 10213997 complement(3237203..3239785) 1 NC_015061.1 PFAM: glycosyl transferase family 2; KEGG: spe:Spro_1871 glucosyltransferase MdoH; family 2 glycosyl transferase 3239785 10213997 Rahaq_2986 Rahnella sp. Y9602 family 2 glycosyl transferase YP_004213707.1 3237203 R 741091 CDS YP_004213708.1 322833681 10213998 complement(3239778..3241313) 1 NC_015061.1 PFAM: periplasmic glucan biosynthesis protein MdoG; KEGG: spe:Spro_1870 glucan biosynthesis protein G; periplasmic glucan biosynthesis protein MdoG 3241313 10213998 Rahaq_2987 Rahnella sp. Y9602 periplasmic glucan biosynthesis protein MdoG YP_004213708.1 3239778 R 741091 CDS YP_004213709.1 322833682 10213999 3241646..3242830 1 NC_015061.1 PFAM: acyltransferase 3; KEGG: spe:Spro_1869 glucans biosynthesis protein; acyltransferase 3242830 10213999 Rahaq_2988 Rahnella sp. Y9602 acyltransferase YP_004213709.1 3241646 D 741091 CDS YP_004213710.1 322833683 10214000 complement(3242914..3243948) 1 NC_015061.1 PFAM: secretion protein HlyD family protein; KEGG: ebi:EbC_32450 secretion protein HlyD family protein; secretion protein HlyD family protein 3243948 10214000 Rahaq_2989 Rahnella sp. Y9602 secretion protein HlyD family protein YP_004213710.1 3242914 R 741091 CDS YP_004213711.1 322833684 10214001 complement(3244007..3245608) 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: ebi:EbC_32440 major facilitator superfamily MFS_1; major facilitator superfamily protein 3245608 10214001 Rahaq_2990 Rahnella sp. Y9602 major facilitator superfamily protein YP_004213711.1 3244007 R 741091 CDS YP_004213712.1 322833685 10214002 3245857..3246651 1 NC_015061.1 KEGG: ebi:EbC_32430 transcriptional regulator, IclR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; IclR family transcriptional regulator 3246651 10214002 Rahaq_2991 Rahnella sp. Y9602 IclR family transcriptional regulator YP_004213712.1 3245857 D 741091 CDS YP_004213713.1 322833686 10214003 3246666..3247112 1 NC_015061.1 PFAM: UspA domain-containing protein; KEGG: pam:PANA_2735 hypothetical protein; UspA domain-containing protein 3247112 10214003 Rahaq_2992 Rahnella sp. Y9602 UspA domain-containing protein YP_004213713.1 3246666 D 741091 CDS YP_004213714.1 322833687 10214004 complement(3247190..3247450) 1 NC_015061.1 KEGG: eic:NT01EI_1431 hypothetical protein; hypothetical protein 3247450 10214004 Rahaq_2993 Rahnella sp. Y9602 hypothetical protein YP_004213714.1 3247190 R 741091 CDS YP_004213715.1 322833688 10214005 complement(3247850..3248212) 1 NC_015061.1 PFAM: Protein of unknown function DUF2502; KEGG: yen:YE2196 hypothetical protein; hypothetical protein 3248212 10214005 Rahaq_2994 Rahnella sp. Y9602 hypothetical protein YP_004213715.1 3247850 R 741091 CDS YP_004213716.1 322833689 10214006 complement(3248464..3248595) 1 NC_015061.1 KEGG: spe:Spro_1866 hypothetical protein; hypothetical protein 3248595 10214006 Rahaq_2995 Rahnella sp. Y9602 hypothetical protein YP_004213716.1 3248464 R 741091 CDS YP_004213717.1 322833690 10214007 3248781..3248993 1 NC_015061.1 KEGG: spe:Spro_2832 hypothetical protein; hypothetical protein 3248993 10214007 Rahaq_2996 Rahnella sp. Y9602 hypothetical protein YP_004213717.1 3248781 D 741091 CDS YP_004213718.1 322833691 10214008 complement(3249070..3249330) 1 NC_015061.1 KEGG: eic:NT01EI_1431 hypothetical protein; hypothetical protein 3249330 10214008 Rahaq_2997 Rahnella sp. Y9602 hypothetical protein YP_004213718.1 3249070 R 741091 CDS YP_004213719.1 322833692 10214009 complement(3249382..3249657) 1 NC_015061.1 KEGG: pwa:Pecwa_1431 hypothetical protein; hypothetical protein 3249657 10214009 Rahaq_2998 Rahnella sp. Y9602 hypothetical protein YP_004213719.1 3249382 R 741091 CDS YP_004213720.1 322833693 10214010 complement(3249782..3250291) 1 NC_015061.1 PFAM: Extracytoplasmic function sigma factor YlaC; KEGG: spe:Spro_1865 hypothetical protein; Extracytoplasmic function sigma factor YlaC 3250291 10214010 Rahaq_2999 Rahnella sp. Y9602 Extracytoplasmic function sigma factor YlaC YP_004213720.1 3249782 R 741091 CDS YP_004213721.1 322833694 10214011 3250469..3250945 1 NC_015061.1 PFAM: transcription activator effector binding; KEGG: yen:YE2070 DNA gyrase inhibitor; transcription activator effector binding protein 3250945 10214011 Rahaq_3000 Rahnella sp. Y9602 transcription activator effector binding protein YP_004213721.1 3250469 D 741091 CDS YP_004213722.1 322833695 10214012 complement(3250950..3251714) 1 NC_015061.1 KEGG: spe:Spro_1631 DNA-binding transcriptional repressor DeoR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator 3251714 10214012 Rahaq_3001 Rahnella sp. Y9602 DeoR family transcriptional regulator YP_004213722.1 3250950 R 741091 CDS YP_004213723.1 322833696 10214013 complement(3251799..3252458) 1 NC_015061.1 PFAM: metallophosphoesterase; KEGG: ecd:ECDH10B_1335 serine/threonine-protein phosphatase; metallophosphoesterase 3252458 10214013 Rahaq_3002 Rahnella sp. Y9602 metallophosphoesterase YP_004213723.1 3251799 R 741091 CDS YP_004213724.1 322833697 10214014 3252682..3252948 1 NC_015061.1 KEGG: mat:MARTH_orf449 50S ribosomal protein L31; hypothetical protein 3252948 10214014 Rahaq_3003 Rahnella sp. Y9602 hypothetical protein YP_004213724.1 3252682 D 741091 CDS YP_004213725.1 322833698 10214018 complement(3253669..3254217) 1 NC_015061.1 TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: pct:PC1_2667 phosphatidylglycerophosphate synthetase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 3254217 10214018 Rahaq_3004 Rahnella sp. Y9602 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase YP_004213725.1 3253669 R 741091 CDS YP_004213726.1 322833699 10214019 complement(3254274..3256109) 1 NC_015061.1 TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; helix-hairpin-helix motif; KEGG: spe:Spro_1849 excinuclease ABC subunit C; SMART: Excinuclease ABC C subunit domain protein; Helix-hairpin-helix DNA-binding class 1; excinuclease ABC subunit C 3256109 10214019 Rahaq_3005 Rahnella sp. Y9602 excinuclease ABC subunit C YP_004213726.1 3254274 R 741091 CDS YP_004213727.1 322833700 10214020 complement(3256102..3256758) 1 NC_015061.1 KEGG: spe:Spro_1848 response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; LuxR family transcriptional regulator 3256758 10214020 Rahaq_3006 Rahnella sp. Y9602 LuxR family transcriptional regulator YP_004213727.1 3256102 R 741091 CDS YP_004213728.1 322833701 10214021 3257498..3257722 1 NC_015061.1 PFAM: Protein of unknown function DUF2594; KEGG: spe:Spro_1847 hypothetical protein; hypothetical protein 3257722 10214021 Rahaq_3007 Rahnella sp. Y9602 hypothetical protein YP_004213728.1 3257498 D 741091 CDS YP_004213729.1 322833702 10214022 3257832..3258005 1 NC_015061.1 KEGG: pct:PC1_1414 hypothetical protein; hypothetical protein 3258005 10214022 Rahaq_3008 Rahnella sp. Y9602 hypothetical protein YP_004213729.1 3257832 D 741091 CDS YP_004213730.1 322833703 10214023 3258009..3258767 1 NC_015061.1 KEGG: spe:Spro_1876 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 3258767 10214023 Rahaq_3009 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004213730.1 3258009 D 741091 CDS YP_004213731.1 322833704 10214024 complement(3258754..3260424) 1 NC_015061.1 KEGG: spe:Spro_1875 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein; 2-isopropylmalate synthase 3260424 10214024 Rahaq_3010 Rahnella sp. Y9602 2-isopropylmalate synthase YP_004213731.1 3258754 R 741091 CDS YP_004213732.1 322833705 10214025 complement(3260586..3261005) 1 NC_015061.1 KEGG: smt:Smal_1137 hypothetical protein; hypothetical protein 3261005 10214025 Rahaq_3011 Rahnella sp. Y9602 hypothetical protein YP_004213732.1 3260586 R 741091 CDS YP_004213733.1 322833706 10214026 3261233..3261481 1 NC_015061.1 hypothetical protein 3261481 10214026 Rahaq_3012 Rahnella sp. Y9602 hypothetical protein YP_004213733.1 3261233 D 741091 CDS YP_004213734.1 322833707 10214028 3262184..3263584 1 NC_015061.1 PFAM: amino acid permease-associated region; KEGG: spe:Spro_1825 D-alanine/D-serine/glycine permease; amino acid permease 3263584 10214028 Rahaq_3013 Rahnella sp. Y9602 amino acid permease YP_004213734.1 3262184 D 741091 CDS YP_004213735.1 322833708 10214029 3263866..3268719 1 NC_015061.1 KEGG: phe:Phep_3637 hypothetical protein; hypothetical protein 3268719 10214029 Rahaq_3014 Rahnella sp. Y9602 hypothetical protein YP_004213735.1 3263866 D 741091 CDS YP_004213736.1 322833709 10214030 complement(3268850..3269839) 1 NC_015061.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: pam:PANA_1413 hypothetical protein; membrane-bound metal-dependent hydrolase 3269839 10214030 Rahaq_3015 Rahnella sp. Y9602 membrane-bound metal-dependent hydrolase YP_004213736.1 3268850 R 741091 CDS YP_004213737.1 322833710 10214031 complement(3269849..3270538) 1 NC_015061.1 PFAM: Tetracycline transcriptional regulator YcdC domain-containing protein; regulatory protein TetR; KEGG: pam:PANA_4032 YcdC; TetR family transcriptional regulator 3270538 10214031 Rahaq_3016 Rahnella sp. Y9602 TetR family transcriptional regulator YP_004213737.1 3269849 R 741091 CDS YP_004213738.1 322833711 10214032 3270950..3272041 1 NC_015061.1 KEGG: pam:PANA_4033 YcdM; TIGRFAM: pyrimidine utilization protein A; PFAM: luciferase; pyrimidine utilization protein A 3272041 10214032 Rahaq_3017 Rahnella sp. Y9602 pyrimidine utilization protein A YP_004213738.1 3270950 D 741091 CDS YP_004213739.1 322833712 10214033 3272041..3272790 1 NC_015061.1 KEGG: pam:PANA_4034 YcdL; TIGRFAM: pyrimidine utilization protein B; PFAM: isochorismatase hydrolase; pyrimidine utilization protein B 3272790 10214033 Rahaq_3018 Rahnella sp. Y9602 pyrimidine utilization protein B YP_004213739.1 3272041 D 741091 CDS YP_004213740.1 322833713 10214034 3272817..3273203 1 NC_015061.1 KEGG: pam:PANA_4035 YcdK; TIGRFAM: pyrimidine utilization protein C; PFAM: Endoribonuclease L-PSP; pyrimidine utilization protein C 3273203 10214034 Rahaq_3019 Rahnella sp. Y9602 pyrimidine utilization protein C YP_004213740.1 3272817 D 741091 CDS YP_004213741.1 322833714 10214035 3273246..3274085 1 NC_015061.1 KEGG: pam:PANA_4036 YcdJ; TIGRFAM: pyrimidine utilization protein D; PFAM: alpha/beta hydrolase fold; pyrimidine utilization protein D 3274085 10214035 Rahaq_3020 Rahnella sp. Y9602 pyrimidine utilization protein D YP_004213741.1 3273246 D 741091 CDS YP_004213742.1 322833715 10214036 3274070..3274660 1 NC_015061.1 PFAM: nitroreductase; KEGG: pam:PANA_4037 YcdI; nitroreductase 3274660 10214036 Rahaq_3021 Rahnella sp. Y9602 nitroreductase YP_004213742.1 3274070 D 741091 CDS YP_004213743.1 322833716 10214037 3274691..3275260 1 NC_015061.1 KEGG: pam:PANA_4038 YcdH; TIGRFAM: pyrimidine utilization flavin reductase protein F; PFAM: flavin reductase domain protein FMN-binding; pyrimidine utilization flavin reductase protein F 3275260 10214037 Rahaq_3022 Rahnella sp. Y9602 pyrimidine utilization flavin reductase protein F YP_004213743.1 3274691 D 741091 CDS YP_004213744.1 322833717 10214038 3275293..3276639 1 NC_015061.1 KEGG: pam:PANA_4039 YcdG; TIGRFAM: pyrimidine utilization transport protein G; uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; pyrimidine utilization transport protein G 3276639 10214038 Rahaq_3023 Rahnella sp. Y9602 pyrimidine utilization transport protein G YP_004213744.1 3275293 D 741091 CDS YP_004213745.1 322833718 10214039 3276894..3278534 1 NC_015061.1 PFAM: extracellular solute-binding protein family 5; KEGG: ebi:EbC_20610 ABC-type transporter, substrate binding protein; family 5 extracellular solute-binding protein 3278534 10214039 Rahaq_3024 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004213745.1 3276894 D 741091 CDS YP_004213746.1 322833719 10214040 3278551..3279510 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3156 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3279510 10214040 Rahaq_3025 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213746.1 3278551 D 741091 CDS YP_004213747.1 322833720 10214041 3279507..3280370 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0073 ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 3280370 10214041 Rahaq_3026 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213747.1 3279507 D 741091 CDS YP_004213748.1 322833721 10214042 3280367..3281986 1 NC_015061.1 KEGG: spe:Spro_3154 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3281986 10214042 Rahaq_3027 Rahnella sp. Y9602 ABC transporter YP_004213748.1 3280367 D 741091 CDS YP_004213749.1 322833722 10214043 3282014..3283075 1 NC_015061.1 PFAM: luciferase; KEGG: spe:Spro_3153 luciferase family protein; luciferase 3283075 10214043 Rahaq_3028 Rahnella sp. Y9602 luciferase YP_004213749.1 3282014 D 741091 CDS YP_004213750.1 322833723 10214044 3283072..3284181 1 NC_015061.1 KEGG: spe:Spro_3152 uncharacterized peroxidase-related enzyme; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; peroxidase-like protein 3284181 10214044 Rahaq_3029 Rahnella sp. Y9602 peroxidase-like protein YP_004213750.1 3283072 D 741091 CDS YP_004213751.1 322833724 10214045 3284174..3285034 1 NC_015061.1 KEGG: ebi:EbC_20540 conserved uncharacterized protein; hypothetical protein 3285034 10214045 Rahaq_3030 Rahnella sp. Y9602 hypothetical protein YP_004213751.1 3284174 D 741091 CDS YP_004213752.1 322833725 10214046 3285336..3286838 1 NC_015061.1 KEGG: yen:YE2762 ABC transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3286838 10214046 Rahaq_3031 Rahnella sp. Y9602 ABC transporter YP_004213752.1 3285336 D 741091 CDS YP_004213753.1 322833726 10214047 3286835..3287845 1 NC_015061.1 PFAM: inner-membrane translocator; KEGG: spe:Spro_3219 monosaccharide-transporting ATPase; inner-membrane translocator 3287845 10214047 Rahaq_3032 Rahnella sp. Y9602 inner-membrane translocator YP_004213753.1 3286835 D 741091 CDS YP_004213754.1 322833727 10214048 complement(3288473..3289012) 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_1455 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3289012 10214048 Rahaq_3033 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004213754.1 3288473 R 741091 CDS YP_004213755.1 322833728 10214049 complement(3289037..3289606) 1 NC_015061.1 KEGG: ebi:EbC_13960 predicted transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 3289606 10214049 Rahaq_3034 Rahnella sp. Y9602 helix-turn-helix domain-containing protein YP_004213755.1 3289037 R 741091 CDS YP_004213756.1 322833729 10214050 3289702..3290646 1 NC_015061.1 KEGG: ebi:EbC_13950 HTH-type transcriptional regulator MlrA (MerR-like regulator A); PFAM: regulatory protein MerR; SMART: regulatory protein MerR; MerR family transcriptional regulator 3290646 10214050 Rahaq_3035 Rahnella sp. Y9602 MerR family transcriptional regulator YP_004213756.1 3289702 D 741091 CDS YP_004213757.1 322833730 10214051 3290639..3291091 1 NC_015061.1 KEGG: eta:ETA_22320 transcriptional regulator; transcriptional regulator 3291091 10214051 Rahaq_3036 Rahnella sp. Y9602 transcriptional regulator YP_004213757.1 3290639 D 741091 CDS YP_004213758.1 322833731 10214052 3291091..3291807 1 NC_015061.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebi:EbC_13930 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 3291807 10214052 Rahaq_3037 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004213758.1 3291091 D 741091 CDS YP_004213759.1 322833732 10214053 3291809..3293167 1 NC_015061.1 PFAM: amine oxidase; KEGG: pct:PC1_2098 amine oxidase; amine oxidase 3293167 10214053 Rahaq_3038 Rahnella sp. Y9602 amine oxidase YP_004213759.1 3291809 D 741091 CDS YP_004213760.1 322833733 10214054 3293164..3293880 1 NC_015061.1 PFAM: protein of unknown function DUF1365; KEGG: pct:PC1_2099 hypothetical protein; hypothetical protein 3293880 10214054 Rahaq_3039 Rahnella sp. Y9602 hypothetical protein YP_004213760.1 3293164 D 741091 CDS YP_004213761.1 322833734 10214055 3293883..3295115 1 NC_015061.1 KEGG: eca:ECA2212 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 3295115 10214055 Rahaq_3040 Rahnella sp. Y9602 cyclopropane-fatty-acyl-phospholipid synthase YP_004213761.1 3293883 D 741091 CDS YP_004213762.1 322833735 10214056 3295112..3295612 1 NC_015061.1 KEGG: ebi:EbC_13890 conserved uncharacterized protein; hypothetical protein 3295612 10214056 Rahaq_3041 Rahnella sp. Y9602 hypothetical protein YP_004213762.1 3295112 D 741091 CDS YP_004213763.1 322833736 10214057 3295612..3296139 1 NC_015061.1 KEGG: ebi:EbC_13880 conserved uncharacterized protein; hypothetical protein 3296139 10214057 Rahaq_3042 Rahnella sp. Y9602 hypothetical protein YP_004213763.1 3295612 D 741091 CDS YP_004213764.1 322833737 10214058 3296160..3296696 1 NC_015061.1 KEGG: ebi:EbC_13870 conserved uncharacterized protein; hypothetical protein 3296696 10214058 Rahaq_3043 Rahnella sp. Y9602 hypothetical protein YP_004213764.1 3296160 D 741091 CDS YP_004213765.1 322833738 10214059 complement(3296778..3297695) 1 NC_015061.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: spe:Spro_1451 hypothetical protein; hypothetical protein 3297695 10214059 Rahaq_3044 Rahnella sp. Y9602 hypothetical protein YP_004213765.1 3296778 R 741091 CDS YP_004213766.1 322833739 10214060 3297921..3298097 1 NC_015061.1 KEGG: set:SEN2155 hypothetical protein; hypothetical protein 3298097 10214060 Rahaq_3045 Rahnella sp. Y9602 hypothetical protein YP_004213766.1 3297921 D 741091 CDS YP_004213767.1 322833740 10214061 complement(3298086..3298844) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_1448 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3298844 10214061 Rahaq_3046 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213767.1 3298086 R 741091 CDS YP_004213768.1 322833741 10214062 complement(3298841..3299785) 1 NC_015061.1 KEGG: yen:YE2863 ABC transport ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3299785 10214062 Rahaq_3047 Rahnella sp. Y9602 ABC transporter YP_004213768.1 3298841 R 741091 CDS YP_004213769.1 322833742 10214063 complement(3299782..3300951) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE2864 ABC transport integral membrane subunit; binding-protein-dependent transport system inner membrane protein 3300951 10214063 Rahaq_3048 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004213769.1 3299782 R 741091 CDS YP_004213770.1 322833743 10214064 complement(3301013..3301951) 1 NC_015061.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: yen:YE2865 substrate-binding transport protein; glycine betaine ABC transporter substrate-binding protein 3301951 10214064 Rahaq_3049 Rahnella sp. Y9602 glycine betaine ABC transporter substrate-binding protein YP_004213770.1 3301013 R 741091 CDS YP_004213771.1 322833744 10214065 3302314..3303810 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_1443 major facilitator transporter; major facilitator superfamily protein 3303810 10214065 Rahaq_3050 Rahnella sp. Y9602 major facilitator superfamily protein YP_004213771.1 3302314 D 741091 CDS YP_004213772.1 322833745 10214066 complement(3303998..3305104) 1 NC_015061.1 KEGG: ypz:YPZ3_1088 hypothetical protein; hypothetical protein 3305104 10214066 Rahaq_3051 Rahnella sp. Y9602 hypothetical protein YP_004213772.1 3303998 R 741091 CDS YP_004213773.1 322833746 10214067 complement(3305246..3306142) 1 NC_015061.1 KEGG: ebi:EbC_37950 transcriptional regulator, LysR family; manually curated; PFAM: LysR substrate-binding; regulatory protein LysR; LysR family transcriptional regulator 3306142 10214067 Rahaq_3052 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004213773.1 3305246 R 741091 CDS YP_004213774.1 322833747 10214068 3306344..3307660 1 NC_015061.1 KEGG: ddd:Dda3937_02186 catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 3307660 10214068 Rahaq_3053 Rahnella sp. Y9602 amidohydrolase YP_004213774.1 3306344 D 741091 CDS YP_004213775.1 322833748 10214069 3307660..3309126 1 NC_015061.1 KEGG: spe:Spro_4201 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase dimerisation domain protein; peptidase M20; amidohydrolase 3309126 10214069 Rahaq_3054 Rahnella sp. Y9602 amidohydrolase YP_004213775.1 3307660 D 741091 CDS YP_004213776.1 322833749 10214070 3309232..3310755 1 NC_015061.1 PFAM: AbgT transporter; KEGG: ddd:Dda3937_00463 aminobenzoyl-glutamate transport protein; AbgT transporter 3310755 10214070 Rahaq_3055 Rahnella sp. Y9602 AbgT transporter YP_004213776.1 3309232 D 741091 CDS YP_004213777.1 322833750 10214071 complement(3310759..3311625) 1 NC_015061.1 PFAM: Protein of unknown function DUF2236; KEGG: ppw:PputW619_0730 hypothetical protein; hypothetical protein 3311625 10214071 Rahaq_3056 Rahnella sp. Y9602 hypothetical protein YP_004213777.1 3310759 R 741091 CDS YP_004213778.1 322833751 10214072 complement(3311643..3312302) 1 NC_015061.1 PFAM: regulatory protein TetR; KEGG: spe:Spro_1394 TetR family transcriptional regulator; TetR family transcriptional regulator 3312302 10214072 Rahaq_3057 Rahnella sp. Y9602 TetR family transcriptional regulator YP_004213778.1 3311643 R 741091 CDS YP_004213779.1 322833752 10214073 3312513..3312770 1 NC_015061.1 KEGG: ebi:EbC_19800 outer membrane protein YcfR; hypothetical protein 3312770 10214073 Rahaq_3058 Rahnella sp. Y9602 hypothetical protein YP_004213779.1 3312513 D 741091 CDS YP_004213780.1 322833753 10214074 3313187..3313444 1 NC_015061.1 PFAM: protein of unknown function DUF1471; KEGG: ctu:Ctu_16920 multiple stress resistance protein BhsA; hypothetical protein 3313444 10214074 Rahaq_3059 Rahnella sp. Y9602 hypothetical protein YP_004213780.1 3313187 D 741091 CDS YP_004213781.1 322833754 10214075 3313614..3313871 1 NC_015061.1 PFAM: protein of unknown function DUF1471; KEGG: spe:Spro_1393 hypothetical protein; hypothetical protein 3313871 10214075 Rahaq_3060 Rahnella sp. Y9602 hypothetical protein YP_004213781.1 3313614 D 741091 CDS YP_004213782.1 322833755 10214076 3314023..3314280 1 NC_015061.1 PFAM: protein of unknown function DUF1471; KEGG: ctu:Ctu_16920 multiple stress resistance protein BhsA; hypothetical protein 3314280 10214076 Rahaq_3061 Rahnella sp. Y9602 hypothetical protein YP_004213782.1 3314023 D 741091 CDS YP_004213783.1 322833756 10214077 3314528..3315742 1 NC_015061.1 KEGG: ent:Ent638_3991 hypothetical protein; hypothetical protein 3315742 10214077 Rahaq_3062 Rahnella sp. Y9602 hypothetical protein YP_004213783.1 3314528 D 741091 CDS YP_004213784.1 322833757 10214078 3315916..3316275 1 NC_015061.1 PFAM: protein of unknown function DUF891; KEGG: spe:Spro_4386 hypothetical protein; hypothetical protein 3316275 10214078 Rahaq_3063 Rahnella sp. Y9602 hypothetical protein YP_004213784.1 3315916 D 741091 CDS YP_004213785.1 322833758 10214079 3316256..3316597 1 NC_015061.1 KEGG: spe:Spro_4385 hypothetical protein; hypothetical protein 3316597 10214079 Rahaq_3064 Rahnella sp. Y9602 hypothetical protein YP_004213785.1 3316256 D 741091 CDS YP_004213786.1 322833759 10214080 complement(3316666..3317763) 1 NC_015061.1 TIGRFAM: D-alanine/D-alanine ligase; KEGG: dda:Dd703_3243 D-alanine/D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; D-alanine--D-alanine ligase 3317763 10214080 Rahaq_3065 Rahnella sp. Y9602 D-alanine--D-alanine ligase YP_004213786.1 3316666 R 741091 CDS YP_004213787.1 322833760 10214081 complement(3317822..3318151) 1 NC_015061.1 KEGG: pfl:PFL_2481 hypothetical protein; hypothetical protein 3318151 10214081 Rahaq_3066 Rahnella sp. Y9602 hypothetical protein YP_004213787.1 3317822 R 741091 CDS YP_004213788.1 322833761 10214082 3318487..3319866 1 NC_015061.1 PFAM: Aldehyde Dehydrogenase; KEGG: kpu:KP1_0725 aldehyde dehydrogenase; aldehyde dehydrogenase 3319866 10214082 Rahaq_3067 Rahnella sp. Y9602 aldehyde dehydrogenase YP_004213788.1 3318487 D 741091 CDS YP_004213789.1 322833762 10214083 3320016..3321137 1 NC_015061.1 SMART: transcription factor jumonji jmjC domain-containing protein; KEGG: yen:YE3022 hypothetical protein; transcription factor jumonji jmjC domain-containing protein 3321137 10214083 Rahaq_3068 Rahnella sp. Y9602 transcription factor jumonji jmjC domain-containing protein YP_004213789.1 3320016 D 741091 CDS YP_004213790.1 322833763 10214084 complement(3321218..3322141) 1 NC_015061.1 KEGG: spe:Spro_1413 phosphonate ABC transporter inner membrane subunit; TIGRFAM: phosphonate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; phosphonate ABC transporter inner membrane protein 3322141 10214084 Rahaq_3069 Rahnella sp. Y9602 phosphonate ABC transporter inner membrane protein YP_004213790.1 3321218 R 741091 CDS YP_004213791.1 322833764 10214085 complement(3322141..3323004) 1 NC_015061.1 KEGG: ypb:YPTS_1313 phosphonate ABC transporter inner membrane subunit; TIGRFAM: phosphonate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; phosphonate ABC transporter inner membrane subunit 3323004 10214085 Rahaq_3070 Rahnella sp. Y9602 phosphonate ABC transporter inner membrane subunit YP_004213791.1 3322141 R 741091 CDS YP_004213792.1 322833765 10214086 complement(3323165..3324097) 1 NC_015061.1 TIGRFAM: phosphonate ABC transporter periplasmic phosphonate binding protein; phosphonate ABC transporter periplasmic phosphonate-binding protein; KEGG: ypb:YPTS_1312 phosphonate ABC transporter periplasmic phosphonate binding protein; phosphonate ABC transporter periplasmic protein 3324097 10214086 Rahaq_3071 Rahnella sp. Y9602 phosphonate ABC transporter periplasmic protein YP_004213792.1 3323165 R 741091 CDS YP_004213793.1 322833766 10214087 complement(3324166..3325002) 1 NC_015061.1 TIGRFAM: phosphonate ABC transporter ATPase subunit; PFAM: ABC transporter related; KEGG: spe:Spro_1410 phosphonate ABC transporter ATPase subunit; SMART: AAA ATPase; phosphonate ABC transporter ATPase 3325002 10214087 Rahaq_3072 Rahnella sp. Y9602 phosphonate ABC transporter ATPase YP_004213793.1 3324166 R 741091 CDS YP_004213794.1 322833767 10214088 3325209..3326900 1 NC_015061.1 KEGG: spe:Spro_1364 D-lactate dehydrogenase; PFAM: D-lactate dehydrogenase membrane binding ; FAD linked oxidase domain protein; D-lactate dehydrogenase 3326900 10214088 Rahaq_3073 Rahnella sp. Y9602 D-lactate dehydrogenase YP_004213794.1 3325209 D 741091 CDS YP_004213795.1 322833768 10214089 complement(3327040..3327630) 1 NC_015061.1 PFAM: protein of unknown function DUF1282; KEGG: spe:Spro_1363 hypothetical protein; hypothetical protein 3327630 10214089 Rahaq_3074 Rahnella sp. Y9602 hypothetical protein YP_004213795.1 3327040 R 741091 CDS YP_004213796.1 322833769 10214090 complement(3327808..3328467) 1 NC_015061.1 KEGG: afl:Aflv_2564 hypothetical protein; hypothetical protein 3328467 10214090 Rahaq_3075 Rahnella sp. Y9602 hypothetical protein YP_004213796.1 3327808 R 741091 CDS YP_004213797.1 322833770 10214091 3328837..3329466 1 NC_015061.1 KEGG: avi:Avi_9202 hypothetical protein; hypothetical protein 3329466 10214091 Rahaq_3076 Rahnella sp. Y9602 hypothetical protein YP_004213797.1 3328837 D 741091 CDS YP_004213798.1 322833771 10214092 complement(3329728..3330660) 1 NC_015061.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: spe:Spro_1352 D-alanyl-D-alanine endopeptidase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 3330660 10214092 Rahaq_3077 Rahnella sp. Y9602 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 YP_004213798.1 3329728 R 741091 CDS YP_004213799.1 322833772 10214093 complement(3330894..3331826) 1 NC_015061.1 PFAM: dihydrouridine synthase DuS; KEGG: spe:Spro_1337 tRNA-dihydrouridine synthase C; dihydrouridine synthase DuS 3331826 10214093 Rahaq_3078 Rahnella sp. Y9602 dihydrouridine synthase DuS YP_004213799.1 3330894 R 741091 CDS YP_004213800.1 322833773 10214094 complement(3331885..3333330) 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_1453 major facilitator transporter; major facilitator superfamily protein 3333330 10214094 Rahaq_3079 Rahnella sp. Y9602 major facilitator superfamily protein YP_004213800.1 3331885 R 741091 CDS YP_004213801.1 322833774 10214095 3333452..3334099 1 NC_015061.1 KEGG: xbo:XBJ1_4386 hypothetical protein; transcriptional regulator 3334099 10214095 Rahaq_3080 Rahnella sp. Y9602 transcriptional regulator YP_004213801.1 3333452 D 741091 CDS YP_004213802.1 322833775 10214096 complement(3334166..3335578) 1 NC_015061.1 KEGG: spe:Spro_1331 ATP-dependent RNA helicase RhlE; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase 3335578 10214096 Rahaq_3081 Rahnella sp. Y9602 DEAD/DEAH box helicase YP_004213802.1 3334166 R 741091 CDS YP_004213803.1 322833776 10214097 3335956..3337158 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_0813 major facilitator superfamily MFS_1; major facilitator superfamily protein 3337158 10214097 Rahaq_3082 Rahnella sp. Y9602 major facilitator superfamily protein YP_004213803.1 3335956 D 741091 CDS YP_004213804.1 322833777 10214098 complement(3337369..3338079) 1 NC_015061.1 PFAM: protein of unknown function UPF0005; KEGG: yen:YE2895 hypothetical protein; hypothetical protein 3338079 10214098 Rahaq_3083 Rahnella sp. Y9602 hypothetical protein YP_004213804.1 3337369 R 741091 CDS YP_004213805.1 322833778 10214099 complement(3338198..3338650) 1 NC_015061.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: eic:NT01EI_2637 molybdopterin guanine dinucleotide biosynthesis protein MoaE; molybdopterin biosynthesis protein MoaE 3338650 10214099 Rahaq_3084 Rahnella sp. Y9602 molybdopterin biosynthesis protein MoaE YP_004213805.1 3338198 R 741091 CDS YP_004213806.1 322833779 10214100 complement(3338652..3338897) 1 NC_015061.1 KEGG: seh:SeHA_C0931 molybdopterin synthase small subunit; TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; molybdopterin converting factor subunit 1 3338897 10214100 Rahaq_3085 Rahnella sp. Y9602 molybdopterin converting factor subunit 1 YP_004213806.1 3338652 R 741091 CDS YP_004213807.1 322833780 10214101 complement(3338894..3339385) 1 NC_015061.1 KEGG: kva:Kvar_3569 molybdenum cofactor biosynthesis protein C; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis protein MoaC; molybdenum cofactor biosynthesis protein C 3339385 10214101 Rahaq_3086 Rahnella sp. Y9602 molybdenum cofactor biosynthesis protein C YP_004213807.1 3338894 R 741091 CDS YP_004213808.1 322833781 10214102 complement(3339388..3339900) 1 NC_015061.1 KEGG: spe:Spro_1321 molybdenum cofactor biosynthesis protein B; TIGRFAM: molybdenum cofactor biosynthesis protein B; molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; molybdenum cofactor biosynthesis protein B 3339900 10214102 Rahaq_3087 Rahnella sp. Y9602 molybdenum cofactor biosynthesis protein B YP_004213808.1 3339388 R 741091 CDS YP_004213809.1 322833782 10214103 complement(3339932..3340984) 1 NC_015061.1 TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis domain protein; Radical SAM domain protein; KEGG: pct:PC1_1512 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A 3340984 10214103 Rahaq_3088 Rahnella sp. Y9602 molybdenum cofactor biosynthesis protein A YP_004213809.1 3339932 R 741091 CDS YP_004213810.1 322833783 10214104 3341328..3342236 1 NC_015061.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: spe:Spro_1319 hypothetical protein; hypothetical protein 3342236 10214104 Rahaq_3089 Rahnella sp. Y9602 hypothetical protein YP_004213810.1 3341328 D 741091 CDS YP_004213811.1 322833784 10214105 complement(3342301..3342825) 1 NC_015061.1 PFAM: isochorismatase hydrolase; KEGG: yen:YE3592 isochorismatase family protein; isochorismatase hydrolase 3342825 10214105 Rahaq_3090 Rahnella sp. Y9602 isochorismatase hydrolase YP_004213811.1 3342301 R 741091 CDS YP_004213812.1 322833785 10214106 complement(3342866..3343234) 1 NC_015061.1 PFAM: Protein of unknown function DUF2132; KEGG: ebi:EbC_21020 hypothetical protein; hypothetical protein 3343234 10214106 Rahaq_3091 Rahnella sp. Y9602 hypothetical protein YP_004213812.1 3342866 R 741091 CDS YP_004213813.1 322833786 10214107 complement(3343301..3345307) 1 NC_015061.1 TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; KEGG: yen:YE2902 excinuclease ABC subunit B; SMART: DEAD-like helicase ; helicase domain protein; excinuclease ABC subunit B 3345307 10214107 Rahaq_3092 Rahnella sp. Y9602 excinuclease ABC subunit B YP_004213813.1 3343301 R 741091 CDS YP_004213814.1 322833787 10214108 3346464..3347174 1 NC_015061.1 KEGG: spe:Spro_1316 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3347174 10214108 Rahaq_3093 Rahnella sp. Y9602 ABC transporter YP_004213814.1 3346464 D 741091 CDS YP_004213815.1 322833788 10214109 complement(3347179..3347859) 1 NC_015061.1 TIGRFAM: dethiobiotin synthase; KEGG: pwa:Pecwa_2961 dithiobiotin synthetase; dethiobiotin synthase 3347859 10214109 Rahaq_3094 Rahnella sp. Y9602 dethiobiotin synthase YP_004213815.1 3347179 R 741091 CDS YP_004213816.1 322833789 10214110 complement(3347995..3348786) 1 NC_015061.1 KEGG: ypy:YPK_2929 biotin biosynthesis protein BioC; TIGRFAM: biotin biosynthesis protein BioC; PFAM: methyltransferase type 11; biotin biosynthesis protein BioC 3348786 10214110 Rahaq_3095 Rahnella sp. Y9602 biotin biosynthesis protein BioC YP_004213816.1 3347995 R 741091 CDS YP_004213817.1 322833790 10214111 complement(3348770..3349891) 1 NC_015061.1 TIGRFAM: 8-amino-7-oxononanoate synthase; KEGG: spe:Spro_1312 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; 8-amino-7-oxononanoate synthase 3349891 10214111 Rahaq_3096 Rahnella sp. Y9602 8-amino-7-oxononanoate synthase YP_004213817.1 3348770 R 741091 CDS YP_004213818.1 322833791 10214112 complement(3349925..3350962) 1 NC_015061.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: biotin synthase; KEGG: ddc:Dd586_2484 biotin synthase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; biotin synthase 3350962 10214112 Rahaq_3097 Rahnella sp. Y9602 biotin synthase YP_004213818.1 3349925 R 741091 CDS YP_004213819.1 322833792 10214113 3351091..3352368 1 NC_015061.1 KEGG: spe:Spro_1310 adenosylmethionine--8-amino-7-oxononanoate transaminase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 3352368 10214113 Rahaq_3098 Rahnella sp. Y9602 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_004213819.1 3351091 D 741091 CDS YP_004213820.1 322833793 10214114 complement(3352369..3353322) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_1370 LysR family transcriptional regulator; LysR family transcriptional regulator 3353322 10214114 Rahaq_3099 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004213820.1 3352369 R 741091 CDS YP_004213821.1 322833794 10214115 3353478..3354632 1 NC_015061.1 PFAM: aminotransferase class I and II; KEGG: spe:Spro_1369 aminotransferase; class I and II aminotransferase 3354632 10214115 Rahaq_3100 Rahnella sp. Y9602 class I and II aminotransferase YP_004213821.1 3353478 D 741091 CDS YP_004213822.1 322833795 10214116 3354674..3355453 1 NC_015061.1 KEGG: spe:Spro_1368 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 3355453 10214116 Rahaq_3101 Rahnella sp. Y9602 family 3 extracellular solute-binding protein YP_004213822.1 3354674 D 741091 CDS YP_004213823.1 322833796 10214117 complement(3355614..3356399) 1 NC_015061.1 TIGRFAM: HAD superfamily (subfamily IIIB) phosphatase, TIGR01672; KEGG: kpu:KP1_0297 acid phosphatase/phosphotransferase; PFAM: acid phosphatase (Class B); HAD superfamily phosphatase 3356399 10214117 Rahaq_3102 Rahnella sp. Y9602 HAD superfamily phosphatase YP_004213823.1 3355614 R 741091 CDS YP_004213824.1 322833797 10214118 3356599..3357636 1 NC_015061.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: pwa:Pecwa_0513 alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase 3357636 10214118 Rahaq_3103 Rahnella sp. Y9602 alcohol dehydrogenase YP_004213824.1 3356599 D 741091 CDS YP_004213825.1 322833798 10214119 3357678..3358373 1 NC_015061.1 PFAM: ThiJ/PfpI domain-containing protein; KEGG: pst:PSPTO_3545 ThiJ/PfpI family protein; ThiJ/PfpI domain-containing protein 3358373 10214119 Rahaq_3104 Rahnella sp. Y9602 ThiJ/PfpI domain-containing protein YP_004213825.1 3357678 D 741091 CDS YP_004213826.1 322833799 10214120 3358411..3358893 1 NC_015061.1 PFAM: PEBP family protein; KEGG: spe:Spro_1308 kinase inhibitor protein; PEBP family protein 3358893 10214120 Rahaq_3105 Rahnella sp. Y9602 PEBP family protein YP_004213826.1 3358411 D 741091 CDS YP_004213827.1 322833800 10214121 3359015..3360295 1 NC_015061.1 PFAM: Pectinesterase; KEGG: ddd:Dda3937_03435 pectinesterase; pectinesterase 3360295 10214121 Rahaq_3106 Rahnella sp. Y9602 pectinesterase YP_004213827.1 3359015 D 741091 CDS YP_004213828.1 322833801 10214122 complement(3360377..3361888) 1 NC_015061.1 KEGG: ypz:YPZ3_3484 methyl-accepting chemotaxis protein II; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 3361888 10214122 Rahaq_3107 Rahnella sp. Y9602 methyl-accepting chemotaxis sensory transducer YP_004213828.1 3360377 R 741091 CDS YP_004213829.1 322833802 10214123 complement(3362143..3363141) 1 NC_015061.1 KEGG: yen:YE2909 6-phosphogluconolactonase; 6-phosphogluconolactonase 3363141 10214123 Rahaq_3108 Rahnella sp. Y9602 6-phosphogluconolactonase YP_004213829.1 3362143 R 741091 CDS YP_004213830.1 322833803 10214124 3363312..3364133 1 NC_015061.1 KEGG: spe:Spro_1306 phosphotransferase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase 3364133 10214124 Rahaq_3109 Rahnella sp. Y9602 cof family hydrolase YP_004213830.1 3363312 D 741091 CDS YP_004213831.1 322833804 10214125 complement(3364189..3364458) 1 NC_015061.1 KEGG: xbo:XBJ1_4114 transcriptional activator of maltose metabolism (modular protein); Nlp family transcriptional regulator 3364458 10214125 Rahaq_3110 Rahnella sp. Y9602 Nlp family transcriptional regulator YP_004213831.1 3364189 R 741091 CDS YP_004213832.1 322833805 10214126 3364603..3364866 1 NC_015061.1 KEGG: spe:Spro_4126 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 3364866 10214126 Rahaq_3111 Rahnella sp. Y9602 helix-turn-helix domain-containing protein YP_004213832.1 3364603 D 741091 CDS YP_004213833.1 322833806 10214127 complement(3364879..3365940) 1 NC_015061.1 TIGRFAM: molybdate ABC transporter ATPase subunit; PFAM: ABC transporter related; TOBE domain-containing protein; KEGG: spe:Spro_1305 molybdate transporter ATP-binding protein; SMART: AAA ATPase; molybdate ABC transporter ATPase 3365940 10214127 Rahaq_3112 Rahnella sp. Y9602 molybdate ABC transporter ATPase YP_004213833.1 3364879 R 741091 CDS YP_004213834.1 322833807 10214128 complement(3365942..3366631) 1 NC_015061.1 KEGG: yen:YE2912 molybdate ABC transporter permease protein; TIGRFAM: molybdate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; molybdate ABC transporter inner membrane subunit 3366631 10214128 Rahaq_3113 Rahnella sp. Y9602 molybdate ABC transporter inner membrane subunit YP_004213834.1 3365942 R 741091 CDS YP_004213835.1 322833808 10214129 complement(3366809..3367582) 1 NC_015061.1 KEGG: spe:Spro_1303 molybdate transporter periplasmic protein; TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; molybdenum ABC transporter periplasmic molybdate-binding protein 3367582 10214129 Rahaq_3114 Rahnella sp. Y9602 molybdenum ABC transporter periplasmic molybdate-binding protein YP_004213835.1 3366809 R 741091 CDS YP_004213836.1 322833809 10214130 complement(3367778..3367933) 1 NC_015061.1 PFAM: Protein of unknown function DUF2592; KEGG: spe:Spro_1302 hypothetical protein; hypothetical protein 3367933 10214130 Rahaq_3115 Rahnella sp. Y9602 hypothetical protein YP_004213836.1 3367778 R 741091 CDS YP_004213837.1 322833810 10214131 3368123..3368905 1 NC_015061.1 KEGG: spe:Spro_1296 DNA-binding transcriptional regulator ModE; TIGRFAM: molybdate transport repressor, ModE; PFAM: TOBE domain-containing protein; regulatory protein LysR; ModE family transcriptional regulator 3368905 10214131 Rahaq_3116 Rahnella sp. Y9602 ModE family transcriptional regulator YP_004213837.1 3368123 D 741091 CDS YP_004213838.1 322833811 10214132 3369027..3370496 1 NC_015061.1 KEGG: spe:Spro_1295 molybdenum transport ATP-binding protein ModF; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3370496 10214132 Rahaq_3117 Rahnella sp. Y9602 ABC transporter YP_004213838.1 3369027 D 741091 CDS YP_004213839.1 322833812 10214133 complement(3370450..3371280) 1 NC_015061.1 KEGG: kse:Ksed_00880 sugar phosphate permease; hypothetical protein 3371280 10214133 Rahaq_3118 Rahnella sp. Y9602 hypothetical protein YP_004213839.1 3370450 R 741091 CDS YP_004213840.1 322833813 10214134 3371419..3372366 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpn:KPN_02452 transcriptional regulator LysR; LysR family transcriptional regulator 3372366 10214134 Rahaq_3119 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004213840.1 3371419 D 741091 CDS YP_004213841.1 322833814 10214135 3372567..3373583 1 NC_015061.1 KEGG: yen:YE2917 UDP-galactose-4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucose 4-epimerase 3373583 10214135 Rahaq_3120 Rahnella sp. Y9602 UDP-glucose 4-epimerase YP_004213841.1 3372567 D 741091 CDS YP_004213842.1 322833815 10214136 3373603..3374652 1 NC_015061.1 TIGRFAM: galactose-1-phosphate uridylyltransferase; KEGG: kpu:KP1_1716 galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein; galactose-1-phosphate uridylyltransferase 3374652 10214136 Rahaq_3121 Rahnella sp. Y9602 galactose-1-phosphate uridylyltransferase YP_004213842.1 3373603 D 741091 CDS YP_004213843.1 322833816 10214137 3374652..3375800 1 NC_015061.1 KEGG: yen:YE2919 galactokinase; TIGRFAM: galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase domain protein; galactokinase 3375800 10214137 Rahaq_3122 Rahnella sp. Y9602 galactokinase YP_004213843.1 3374652 D 741091 CDS YP_004213844.1 322833817 10214138 3375794..3376840 1 NC_015061.1 TIGRFAM: galactose mutarotase; KEGG: spe:Spro_1290 galactose mutarotase; PFAM: Aldose 1-epimerase; galactose mutarotase 3376840 10214138 Rahaq_3123 Rahnella sp. Y9602 galactose mutarotase YP_004213844.1 3375794 D 741091 CDS YP_004213845.1 322833818 10214139 3376992..3377324 1 NC_015061.1 PFAM: PsiF repeat-containing protein; KEGG: yen:YE2921 starvation-inducible protein; PsiF repeat-containing protein 3377324 10214139 Rahaq_3124 Rahnella sp. Y9602 PsiF repeat-containing protein YP_004213845.1 3376992 D 741091 CDS YP_004213846.1 322833819 10214140 3377532..3378284 1 NC_015061.1 TIGRFAM: phosphoglycerate mutase 1 family; KEGG: yen:YE2924 phosphoglyceromutase; PFAM: Phosphoglycerate mutase; phosphoglycerate mutase 3378284 10214140 Rahaq_3125 Rahnella sp. Y9602 phosphoglycerate mutase YP_004213846.1 3377532 D 741091 CDS YP_004213847.1 322833820 10214141 3378531..3379796 1 NC_015061.1 PFAM: protein of unknown function DUF1479; KEGG: xbo:XBJ1_3889 hypothetical protein; hypothetical protein 3379796 10214141 Rahaq_3126 Rahnella sp. Y9602 hypothetical protein YP_004213847.1 3378531 D 741091 CDS YP_004213848.1 322833821 10214142 complement(3379890..3380042) 1 NC_015061.1 KEGG: kva:Kvar_2519 hypothetical protein; hypothetical protein 3380042 10214142 Rahaq_3127 Rahnella sp. Y9602 hypothetical protein YP_004213848.1 3379890 R 741091 CDS YP_004213849.1 322833822 10214143 complement(3380061..3380384) 1 NC_015061.1 KEGG: hse:Hsero_3621 hypothetical protein; hypothetical protein 3380384 10214143 Rahaq_3128 Rahnella sp. Y9602 hypothetical protein YP_004213849.1 3380061 R 741091 CDS YP_004213850.1 322833823 10214144 3380522..3380995 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE4108 hypothetical protein; N-acetyltransferase GCN5 3380995 10214144 Rahaq_3129 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004213850.1 3380522 D 741091 CDS YP_004213851.1 322833824 10214145 complement(3381077..3382129) 1 NC_015061.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: eum:ECUMN_0838 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase 3382129 10214145 Rahaq_3130 Rahnella sp. Y9602 phospho-2-dehydro-3-deoxyheptonate aldolase YP_004213851.1 3381077 R 741091 CDS YP_004213852.1 322833825 10214146 3382333..3382662 1 NC_015061.1 KEGG: ses:SARI_02177 hypothetical protein; hypothetical protein 3382662 10214146 Rahaq_3131 Rahnella sp. Y9602 hypothetical protein YP_004213852.1 3382333 D 741091 CDS YP_004213853.1 322833826 10214147 3382789..3383742 1 NC_015061.1 KEGG: spe:Spro_1284 zinc transporter ZitB; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter 3383742 10214147 Rahaq_3132 Rahnella sp. Y9602 cation diffusion facilitator family transporter YP_004213853.1 3382789 D 741091 CDS YP_004213854.1 322833827 10214148 complement(3383811..3384536) 1 NC_015061.1 KEGG: yen:YE2927 intergral membrane NMN transport protein PnuC; TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC 3384536 10214148 Rahaq_3133 Rahnella sp. Y9602 nicotinamide mononucleotide transporter PnuC YP_004213854.1 3383811 R 741091 CDS YP_004213855.1 322833828 10214149 complement(3384592..3385656) 1 NC_015061.1 TIGRFAM: quinolinate synthetase complex, A subunit; KEGG: spe:Spro_1282 quinolinate synthetase; PFAM: Quinolinate synthetase A; quinolinate synthetase complex subunit A 3385656 10214149 Rahaq_3134 Rahnella sp. Y9602 quinolinate synthetase complex subunit A YP_004213855.1 3384592 R 741091 CDS YP_004213856.1 322833829 10214153 complement(3386632..3387423) 1 NC_015061.1 TIGRFAM: tol-pal system protein YbgF; KEGG: yen:YE2930 tol-pal system protein YbgF; tol-pal system protein YbgF 3387423 10214153 Rahaq_3135 Rahnella sp. Y9602 tol-pal system protein YbgF YP_004213856.1 3386632 R 741091 CDS YP_004213857.1 322833830 10214154 complement(3387433..3387945) 1 NC_015061.1 KEGG: ebi:EbC_13110 peptidoglycan-associated lipoprotein Pal, OmpA family of porins; TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; peptidoglycan-associated lipoprotein 3387945 10214154 Rahaq_3136 Rahnella sp. Y9602 peptidoglycan-associated lipoprotein YP_004213857.1 3387433 R 741091 CDS YP_004213858.1 322833831 10214155 complement(3387994..3389286) 1 NC_015061.1 KEGG: yen:YE2932 translocation protein TolB; TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: TolB domain-containing protein; WD40-like beta Propeller containing protein; Tol-Pal system beta propeller repeat-containing protein TolB 3389286 10214155 Rahaq_3137 Rahnella sp. Y9602 Tol-Pal system beta propeller repeat-containing protein TolB YP_004213858.1 3387994 R 741091 CDS YP_004213859.1 322833832 10214156 complement(3389416..3390627) 1 NC_015061.1 KEGG: ddc:Dd586_1199 protein TolA; TIGRFAM: protein TolA; TonB family protein; PFAM: Tol-Pal system TolA; protein TolA 3390627 10214156 Rahaq_3138 Rahnella sp. Y9602 protein TolA YP_004213859.1 3389416 R 741091 CDS YP_004213860.1 322833833 10214157 complement(3390741..3391172) 1 NC_015061.1 KEGG: ebi:EbC_13080 biopolymer transport portein TolR, probable fragment; TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; protein TolR 3391172 10214157 Rahaq_3139 Rahnella sp. Y9602 protein TolR YP_004213860.1 3390741 R 741091 CDS YP_004213861.1 322833834 10214158 complement(3391184..3391873) 1 NC_015061.1 KEGG: ctu:Ctu_13440 colicin uptake protein TolQ; TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; protein TolQ 3391873 10214158 Rahaq_3140 Rahnella sp. Y9602 protein TolQ YP_004213861.1 3391184 R 741091 CDS YP_004213862.1 322833835 10214159 complement(3391870..3392274) 1 NC_015061.1 manually curated; TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; KEGG: yen:YE2936 acyl-CoA thioester hydrolase YbgC; PFAM: thioesterase superfamily protein; tol-pal system-associated acyl-CoA thioesterase 3392274 10214159 Rahaq_3141 Rahnella sp. Y9602 tol-pal system-associated acyl-CoA thioesterase YP_004213862.1 3391870 R 741091 CDS YP_004213863.1 322833836 10214160 complement(3392424..3392717) 1 NC_015061.1 KEGG: pct:PC1_1244 hypothetical protein; TIGRFAM: cyd operon protein YbgE; PFAM: Cyd operon protein YbgE; cyd operon protein YbgE 3392717 10214160 Rahaq_3142 Rahnella sp. Y9602 cyd operon protein YbgE YP_004213863.1 3392424 R 741091 CDS YP_004213864.1 322833837 10214161 complement(3392720..3392833) 1 NC_015061.1 KEGG: kva:Kvar_3632 cyd operon protein YbgT; TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; cyd operon protein YbgT 3392833 10214161 Rahaq_3143 Rahnella sp. Y9602 cyd operon protein YbgT YP_004213864.1 3392720 R 741091 CDS YP_004213865.1 322833838 10214162 complement(3392844..3393983) 1 NC_015061.1 KEGG: yen:YE2938 cytochrome d ubiquinol oxidase subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase, subunit II 3393983 10214162 Rahaq_3144 Rahnella sp. Y9602 cytochrome d ubiquinol oxidase, subunit II YP_004213865.1 3392844 R 741091 CDS YP_004213866.1 322833839 10214163 complement(3393998..3395566) 1 NC_015061.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: spe:Spro_1271 cytochrome bd ubiquinol oxidase subunit I; cytochrome bd ubiquinol oxidase subunit I 3395566 10214163 Rahaq_3145 Rahnella sp. Y9602 cytochrome bd ubiquinol oxidase subunit I YP_004213866.1 3393998 R 741091 CDS YP_004213867.1 322833840 10214164 complement(3396289..3397161) 1 NC_015061.1 KEGG: ypb:YPTS_1227 succinyl-CoA synthetase subunit alpha; TIGRFAM: succinyl-CoA synthetase, subunit alpha; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding domain protein; succinyl-CoA synthetase subunit alpha 3397161 10214164 Rahaq_3146 Rahnella sp. Y9602 succinyl-CoA synthetase subunit alpha YP_004213867.1 3396289 R 741091 CDS YP_004213868.1 322833841 10214165 complement(3397161..3398327) 1 NC_015061.1 TIGRFAM: succinyl-CoA synthetase, subunit beta; KEGG: cko:CKO_02431 succinyl-CoA synthetase subunit beta; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase; succinyl-CoA synthetase subunit beta 3398327 10214165 Rahaq_3147 Rahnella sp. Y9602 succinyl-CoA synthetase subunit beta YP_004213868.1 3397161 R 741091 CDS YP_004213869.1 322833842 10214166 complement(3398420..3399649) 1 NC_015061.1 KEGG: ddd:Dda3937_01534 dihydrolipoyltranssuccinase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 3399649 10214166 Rahaq_3148 Rahnella sp. Y9602 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase YP_004213869.1 3398420 R 741091 CDS YP_004213870.1 322833843 10214167 complement(3399696..3402503) 1 NC_015061.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; KEGG: spe:Spro_1267 2-oxoglutarate dehydrogenase E1 component; PFAM: Transketolase central region; dehydrogenase E1 component; 2-oxoglutarate dehydrogenase E1 3402503 10214167 Rahaq_3149 Rahnella sp. Y9602 2-oxoglutarate dehydrogenase E1 YP_004213870.1 3399696 R 741091 CDS YP_004213871.1 322833844 10214168 complement(3402904..3403620) 1 NC_015061.1 KEGG: dze:Dd1591_2915 succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; succinate dehydrogenase and fumarate reductase iron-sulfur protein 3403620 10214168 Rahaq_3150 Rahnella sp. Y9602 succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_004213871.1 3402904 R 741091 CDS YP_004213872.1 322833845 10214169 complement(3403640..3405406) 1 NC_015061.1 KEGG: ddc:Dd586_1185 succinate dehydrogenase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; succinate dehydrogenase flavoprotein subunit 3405406 10214169 Rahaq_3151 Rahnella sp. Y9602 succinate dehydrogenase flavoprotein subunit YP_004213872.1 3403640 R 741091 CDS YP_004213873.1 322833846 10214170 complement(3405410..3405757) 1 NC_015061.1 TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; KEGG: spe:Spro_1264 succinate dehydrogenase cytochrome b556 small membrane subunit; succinate dehydrogenase 3405757 10214170 Rahaq_3152 Rahnella sp. Y9602 succinate dehydrogenase YP_004213873.1 3405410 R 741091 CDS YP_004213874.1 322833847 10214171 complement(3405751..3406140) 1 NC_015061.1 KEGG: spe:Spro_1263 succinate dehydrogenase cytochrome b556 large membrane subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; succinate dehydrogenase, cytochrome b556 subunit 3406140 10214171 Rahaq_3153 Rahnella sp. Y9602 succinate dehydrogenase, cytochrome b556 subunit YP_004213874.1 3405751 R 741091 CDS YP_004213875.1 322833848 10214172 3406968..3408251 1 NC_015061.1 KEGG: enc:ECL_03012 citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; citrate synthase I 3408251 10214172 Rahaq_3154 Rahnella sp. Y9602 citrate synthase I YP_004213875.1 3406968 D 741091 CDS YP_004213876.1 322833849 10214173 3408537..3411488 1 NC_015061.1 KEGG: yen:YE4059 autotransporter protein; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; Pertactin; outer membrane autotransporter barrel domain-containing protein 3411488 10214173 Rahaq_3155 Rahnella sp. Y9602 outer membrane autotransporter barrel domain-containing protein YP_004213876.1 3408537 D 741091 CDS YP_004213877.1 322833850 10214174 complement(3411540..3412334) 1 NC_015061.1 KEGG: spe:Spro_1261 endonuclease VIII; PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA-(apurinic or apyrimidinic site) lyase 3412334 10214174 Rahaq_3156 Rahnella sp. Y9602 DNA-(apurinic or apyrimidinic site) lyase YP_004213877.1 3411540 R 741091 CDS YP_004213878.1 322833851 10214175 complement(3412334..3412984) 1 NC_015061.1 TIGRFAM: pyrrolidone-carboxylate peptidase; KEGG: spe:Spro_1260 pyrrolidone-carboxylate peptidase; PFAM: peptidase C15 pyroglutamyl peptidase I; pyrrolidone-carboxylate peptidase 3412984 10214175 Rahaq_3157 Rahnella sp. Y9602 pyrrolidone-carboxylate peptidase YP_004213878.1 3412334 R 741091 CDS YP_004213879.1 322833852 10214176 complement(3413012..3413749) 1 NC_015061.1 PFAM: LamB/YcsF family protein; KEGG: yen:YE2953 LamB/YcsF family protein; LamB/YcsF family protein 3413749 10214176 Rahaq_3158 Rahnella sp. Y9602 LamB/YcsF family protein YP_004213879.1 3413012 R 741091 CDS YP_004213880.1 322833853 10214177 complement(3413739..3414668) 1 NC_015061.1 SMART: Allophanate hydrolase subunit 2; TIGRFAM: urea amidolyase related protein; KEGG: spe:Spro_1256 UreA amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; urea amidolyase 3414668 10214177 Rahaq_3159 Rahnella sp. Y9602 urea amidolyase YP_004213880.1 3413739 R 741091 CDS YP_004213881.1 322833854 10214178 complement(3414662..3415327) 1 NC_015061.1 KEGG: yen:YE2955A hypothetical protein; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; allophanate hydrolase subunit 1 3415327 10214178 Rahaq_3160 Rahnella sp. Y9602 allophanate hydrolase subunit 1 YP_004213881.1 3414662 R 741091 CDS YP_004213882.1 322833855 10214179 3415552..3416982 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_0839 major facilitator transporter; major facilitator superfamily protein 3416982 10214179 Rahaq_3161 Rahnella sp. Y9602 major facilitator superfamily protein YP_004213882.1 3415552 D 741091 CDS YP_004213883.1 322833856 10214180 complement(3416979..3417722) 1 NC_015061.1 PFAM: protein of unknown function DUF34; KEGG: yen:YE2955 hydrolase-oxidase; hypothetical protein 3417722 10214180 Rahaq_3162 Rahnella sp. Y9602 hypothetical protein YP_004213883.1 3416979 R 741091 CDS YP_004213884.1 322833857 10214181 complement(3417749..3418732) 1 NC_015061.1 KEGG: spe:Spro_1253 cyclic-AMP phosphodiesterase; PFAM: cyclic-AMP phosphodiesterase class-II; cyclic-AMP phosphodiesterase 3418732 10214181 Rahaq_3163 Rahnella sp. Y9602 cyclic-AMP phosphodiesterase YP_004213884.1 3417749 R 741091 CDS YP_004213885.1 322833858 10214182 complement(3418766..3420196) 1 NC_015061.1 KEGG: spe:Spro_1252 deoxyribodipyrimidine photolyase; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; deoxyribodipyrimidine photo-lyase 3420196 10214182 Rahaq_3164 Rahnella sp. Y9602 deoxyribodipyrimidine photo-lyase YP_004213885.1 3418766 R 741091 CDS YP_004213886.1 322833859 10214183 complement(3420218..3421171) 1 NC_015061.1 PFAM: protein of unknown function DUF523; protein of unknown function DUF1722; KEGG: spe:Spro_1251 hypothetical protein; hypothetical protein 3421171 10214183 Rahaq_3165 Rahnella sp. Y9602 hypothetical protein YP_004213886.1 3420218 R 741091 CDS YP_004213887.1 322833860 10214184 complement(3421354..3421560) 1 NC_015061.1 PFAM: Protein of unknown function DUF2517; KEGG: spe:Spro_1250 hypothetical protein; hypothetical protein 3421560 10214184 Rahaq_3166 Rahnella sp. Y9602 hypothetical protein YP_004213887.1 3421354 R 741091 CDS YP_004213888.1 322833861 10214185 3422060..3423748 1 NC_015061.1 TIGRFAM: potassium-transporting ATPase, A subunit; KEGG: ypi:YpsIP31758_1108 potassium-transporting ATPase subunit A; PFAM: K transporting ATPase A subunit; potassium-transporting ATPase subunit A 3423748 10214185 Rahaq_3167 Rahnella sp. Y9602 potassium-transporting ATPase subunit A YP_004213888.1 3422060 D 741091 CDS YP_004213889.1 322833862 10214186 3423792..3425858 1 NC_015061.1 KEGG: yen:YE2961 potassium-transporting ATPase subunit B; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; K+-transporting ATPase subunit B 3425858 10214186 Rahaq_3168 Rahnella sp. Y9602 K+-transporting ATPase subunit B YP_004213889.1 3423792 D 741091 CDS YP_004213890.1 322833863 10214187 3425877..3426470 1 NC_015061.1 TIGRFAM: potassium-transporting ATPase, C subunit; KEGG: ebi:EbC_43380 potassium-transporting ATPase, C chain; PFAM: K transporting ATPase KdpC subunit; potassium-transporting ATPase subunit C 3426470 10214187 Rahaq_3169 Rahnella sp. Y9602 potassium-transporting ATPase subunit C YP_004213890.1 3425877 D 741091 CDS YP_004213891.1 322833864 10214188 3426489..3429185 1 NC_015061.1 KEGG: spe:Spro_1245 sensor protein KdpD; PFAM: Osmosensitive K channel His kinase sensor; UspA domain-containing protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; osmosensitive K channel His kinase sensor 3429185 10214188 Rahaq_3170 Rahnella sp. Y9602 osmosensitive K channel His kinase sensor YP_004213891.1 3426489 D 741091 CDS YP_004213892.1 322833865 10214189 3429182..3429871 1 NC_015061.1 KEGG: spe:Spro_1244 DNA-binding transcriptional activator KdpE; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator 3429871 10214189 Rahaq_3171 Rahnella sp. Y9602 transcriptional regulator YP_004213892.1 3429182 D 741091 CDS YP_004213893.1 322833866 10214190 complement(3429861..3430577) 1 NC_015061.1 PFAM: transcriptional regulator PadR family protein; KEGG: ypb:YPTS_3230 PadR-like family transcriptional regulator; PadR family transcriptional regulator 3430577 10214190 Rahaq_3172 Rahnella sp. Y9602 PadR family transcriptional regulator YP_004213893.1 3429861 R 741091 CDS YP_004213894.1 322833867 10214191 complement(3430760..3432403) 1 NC_015061.1 KEGG: spe:Spro_1241 phosphoglucomutase; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucomutase, alpha-D-glucose phosphate-specific 3432403 10214191 Rahaq_3173 Rahnella sp. Y9602 phosphoglucomutase, alpha-D-glucose phosphate-specific YP_004213894.1 3430760 R 741091 CDS YP_004213895.1 322833868 10214192 complement(3432428..3432979) 1 NC_015061.1 PFAM: SeqA family protein; KEGG: eca:ECA1335 replication initiation regulator SeqA; SeqA family protein 3432979 10214192 Rahaq_3174 Rahnella sp. Y9602 SeqA family protein YP_004213895.1 3432428 R 741091 CDS YP_004213896.1 322833869 10214193 3433203..3434003 1 NC_015061.1 PFAM: alpha/beta hydrolase fold; KEGG: spe:Spro_1239 alpha/beta hydrolase fold; alpha/beta hydrolase 3434003 10214193 Rahaq_3175 Rahnella sp. Y9602 alpha/beta hydrolase YP_004213896.1 3433203 D 741091 CDS YP_004213897.1 322833870 10214194 3434220..3434546 1 NC_015061.1 KEGG: spe:Spro_1238 LexA regulated protein; LexA family transcriptional regulator 3434546 10214194 Rahaq_3176 Rahnella sp. Y9602 LexA family transcriptional regulator YP_004213897.1 3434220 D 741091 CDS YP_004213898.1 322833871 10214195 complement(3434623..3436287) 1 NC_015061.1 KEGG: yen:YE2971 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3436287 10214195 Rahaq_3177 Rahnella sp. Y9602 methyl-accepting chemotaxis sensory transducer YP_004213898.1 3434623 R 741091 CDS YP_004213899.1 322833872 10214196 3436709..3437236 1 NC_015061.1 KEGG: ypb:YPTS_1183 flavodoxin FldA; TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; flavodoxin 3437236 10214196 Rahaq_3178 Rahnella sp. Y9602 flavodoxin YP_004213899.1 3436709 D 741091 CDS YP_004213900.1 322833873 10214197 3437549..3438004 1 NC_015061.1 PFAM: ferric-uptake regulator; KEGG: ddd:Dda3937_01561 DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport; ferric uptake regulator family protein 3438004 10214197 Rahaq_3179 Rahnella sp. Y9602 ferric uptake regulator family protein YP_004213900.1 3437549 D 741091 CDS YP_004213901.1 322833874 10214198 complement(3438133..3438474) 1 NC_015061.1 KEGG: spe:Spro_1231 lipoprotein; lipoprotein 3438474 10214198 Rahaq_3180 Rahnella sp. Y9602 lipoprotein YP_004213901.1 3438133 R 741091 CDS YP_004213902.1 322833875 10214199 complement(3438482..3439903) 1 NC_015061.1 PFAM: outer membrane porin; KEGG: spe:Spro_1230 outer membrane porin; outer membrane porin 3439903 10214199 Rahaq_3181 Rahnella sp. Y9602 outer membrane porin YP_004213902.1 3438482 R 741091 CDS YP_004213903.1 322833876 10214200 complement(3440331..3442001) 1 NC_015061.1 KEGG: spe:Spro_1229 glutaminyl-tRNA synthetase; TIGRFAM: glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; glutaminyl-tRNA synthetase 3442001 10214200 Rahaq_3182 Rahnella sp. Y9602 glutaminyl-tRNA synthetase YP_004213903.1 3440331 R 741091 CDS YP_004213904.1 322833877 10214201 complement(3442194..3444233) 1 NC_015061.1 TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PTS system, glucose subfamily, IIA subunit; KEGG: yen:YE2978 PTS system, N-acetylglucosamine-specific IIABC component; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; sugar-specific permease EIIA 1 domain; PTS system N-acetylglucosamine-specific transporter subunit IIBC 3444233 10214201 Rahaq_3183 Rahnella sp. Y9602 PTS system N-acetylglucosamine-specific transporter subunit IIBC YP_004213904.1 3442194 R 741091 CDS YP_004213905.1 322833878 10214202 3444616..3445416 1 NC_015061.1 KEGG: ebi:EbC_12700 glucosamine-6-phosphate deaminase; TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; glucosamine-6-phosphate isomerase 3445416 10214202 Rahaq_3184 Rahnella sp. Y9602 glucosamine-6-phosphate isomerase YP_004213905.1 3444616 D 741091 CDS YP_004213906.1 322833879 10214203 3445566..3446705 1 NC_015061.1 TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: yen:YE2980 N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; N-acetylglucosamine-6-phosphate deacetylase 3446705 10214203 Rahaq_3185 Rahnella sp. Y9602 N-acetylglucosamine-6-phosphate deacetylase YP_004213906.1 3445566 D 741091 CDS YP_004213907.1 322833880 10214204 3446726..3447949 1 NC_015061.1 PFAM: ROK family protein; regulatory protein MarR; KEGG: spe:Spro_1225 ROK family protein; ROK family protein 3447949 10214204 Rahaq_3186 Rahnella sp. Y9602 ROK family protein YP_004213907.1 3446726 D 741091 CDS YP_004213908.1 322833881 10214205 3447992..3448759 1 NC_015061.1 KEGG: spe:Spro_1224 UMP phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 3448759 10214205 Rahaq_3187 Rahnella sp. Y9602 HAD-superfamily hydrolase YP_004213908.1 3447992 D 741091 CDS YP_004213909.1 322833882 10214206 3449120..3450784 1 NC_015061.1 KEGG: ddc:Dd586_1156 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II; asparagine synthase 3450784 10214206 Rahaq_3188 Rahnella sp. Y9602 asparagine synthase YP_004213909.1 3449120 D 741091 CDS YP_004213910.1 322833883 10214213 complement(3451820..3453004) 1 NC_015061.1 KEGG: spe:Spro_1221 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: FAD dependent oxidoreductase; UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase 3453004 10214213 Rahaq_3189 Rahnella sp. Y9602 UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase YP_004213910.1 3451820 R 741091 CDS YP_004213911.1 322833884 10214214 3453192..3454616 1 NC_015061.1 TIGRFAM: tRNA-i(6)A37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004 ; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; KEGG: spe:Spro_1220 tRNA-i(6)A37 thiotransferase enzyme MiaB; SMART: Elongator protein 3/MiaB/NifB; tRNA-i(6)A37 thiotransferase enzyme MiaB 3454616 10214214 Rahaq_3190 Rahnella sp. Y9602 tRNA-i(6)A37 thiotransferase enzyme MiaB YP_004213911.1 3453192 D 741091 CDS YP_004213912.1 322833885 10214215 3454880..3455938 1 NC_015061.1 PFAM: PhoH family protein; KEGG: spe:Spro_1218 PhoH family protein; PhoH family protein 3455938 10214215 Rahaq_3191 Rahnella sp. Y9602 PhoH family protein YP_004213912.1 3454880 D 741091 CDS YP_004213913.1 322833886 10214216 3455935..3456408 1 NC_015061.1 PFAM: protein of unknown function UPF0054; KEGG: yen:YE2987 metalloprotease; hypothetical protein 3456408 10214216 Rahaq_3192 Rahnella sp. Y9602 hypothetical protein YP_004213913.1 3455935 D 741091 CDS YP_004213914.1 322833887 10214217 3456508..3457386 1 NC_015061.1 PFAM: CBS domain containing protein; transporter-associated region; KEGG: yen:YE2988 hypothetical protein; hypothetical protein 3457386 10214217 Rahaq_3193 Rahnella sp. Y9602 hypothetical protein YP_004213914.1 3456508 D 741091 CDS YP_004213915.1 322833888 10214218 3457394..3458923 1 NC_015061.1 KEGG: spe:Spro_1215 apolipoprotein N-acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 3458923 10214218 Rahaq_3194 Rahnella sp. Y9602 apolipoprotein N-acyltransferase YP_004213915.1 3457394 D 741091 CDS YP_004213916.1 322833889 10214219 3459361..3460257 1 NC_015061.1 KEGG: spe:Spro_1214 glutamate and aspartate transporter subunit; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 3460257 10214219 Rahaq_3195 Rahnella sp. Y9602 family 3 extracellular solute-binding protein YP_004213916.1 3459361 D 741091 CDS YP_004213917.1 322833890 10214220 3460447..3461187 1 NC_015061.1 KEGG: kva:Kvar_3686 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 3461187 10214220 Rahaq_3196 Rahnella sp. Y9602 polar amino acid ABC transporter inner membrane subunit YP_004213917.1 3460447 D 741091 CDS YP_004213918.1 322833891 10214221 3461190..3461867 1 NC_015061.1 KEGG: enc:ECL_03050 glutamate/aspartate transport system permease protein; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 3461867 10214221 Rahaq_3197 Rahnella sp. Y9602 polar amino acid ABC transporter inner membrane subunit YP_004213918.1 3461190 D 741091 CDS YP_004213919.1 322833892 10214222 3461864..3462589 1 NC_015061.1 KEGG: spe:Spro_1211 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3462589 10214222 Rahaq_3198 Rahnella sp. Y9602 ABC transporter YP_004213919.1 3461864 D 741091 CDS YP_004213920.1 322833893 10214223 complement(3462649..3463149) 1 NC_015061.1 PFAM: protein of unknown function DUF1451; KEGG: ent:Ent638_1177 hypothetical protein; hypothetical protein 3463149 10214223 Rahaq_3199 Rahnella sp. Y9602 hypothetical protein YP_004213920.1 3462649 R 741091 CDS YP_004213921.1 322833894 10214224 3463417..3466101 1 NC_015061.1 KEGG: spe:Spro_1207 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; leucyl-tRNA synthetase 3466101 10214224 Rahaq_3200 Rahnella sp. Y9602 leucyl-tRNA synthetase YP_004213921.1 3463417 D 741091 CDS YP_004213922.1 322833895 10214225 3466116..3466748 1 NC_015061.1 PFAM: Rare lipoprotein B; KEGG: spe:Spro_1206 LPS-assembly lipoprotein RlpB; Rare lipoprotein B 3466748 10214225 Rahaq_3201 Rahnella sp. Y9602 Rare lipoprotein B YP_004213922.1 3466116 D 741091 CDS YP_004213923.1 322833896 10214226 3466745..3467785 1 NC_015061.1 TIGRFAM: DNA polymerase III, subunit delta; KEGG: spe:Spro_1205 DNA polymerase III subunit delta; PFAM: DNA polymerase III delta; DNA polymerase III subunit delta 3467785 10214226 Rahaq_3202 Rahnella sp. Y9602 DNA polymerase III subunit delta YP_004213923.1 3466745 D 741091 CDS YP_004213924.1 322833897 10214227 3467800..3468477 1 NC_015061.1 TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; KEGG: spe:Spro_1204 nicotinic acid mononucleotide adenylyltransferase; PFAM: cytidylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase 3468477 10214227 Rahaq_3203 Rahnella sp. Y9602 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_004213924.1 3467800 D 741091 CDS YP_004213925.1 322833898 10214228 3468684..3469001 1 NC_015061.1 KEGG: dda:Dd703_1094 hypothetical protein; TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; iojap family protein 3469001 10214228 Rahaq_3204 Rahnella sp. Y9602 iojap family protein YP_004213925.1 3468684 D 741091 CDS YP_004213926.1 322833899 10214229 3469005..3469475 1 NC_015061.1 PFAM: protein of unknown function DUF163; KEGG: spe:Spro_1202 hypothetical protein; hypothetical protein 3469475 10214229 Rahaq_3205 Rahnella sp. Y9602 hypothetical protein YP_004213926.1 3469005 D 741091 CDS YP_004213927.1 322833900 10214230 3469514..3471418 1 NC_015061.1 TIGRFAM: penicillin-binding protein 2; KEGG: spe:Spro_1201 penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; penicillin-binding protein 2 3471418 10214230 Rahaq_3206 Rahnella sp. Y9602 penicillin-binding protein 2 YP_004213927.1 3469514 D 741091 CDS YP_004213928.1 322833901 10214231 3471425..3472537 1 NC_015061.1 manually curated; TIGRFAM: rod shape-determining protein RodA; KEGG: yen:YE3003 cell wall shape-determining protein; PFAM: cell cycle protein; rod shape-determining protein RodA 3472537 10214231 Rahaq_3207 Rahnella sp. Y9602 rod shape-determining protein RodA YP_004213928.1 3471425 D 741091 CDS YP_004213929.1 322833902 10214232 3472547..3473698 1 NC_015061.1 KEGG: spe:Spro_1199 rare lipoprotein A; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain-containing protein; rare lipoprotein A 3473698 10214232 Rahaq_3208 Rahnella sp. Y9602 rare lipoprotein A YP_004213929.1 3472547 D 741091 CDS YP_004213930.1 322833903 10214233 3473855..3475063 1 NC_015061.1 KEGG: spe:Spro_1198 D-alanyl-D-alanine carboxypeptidase fraction A; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; Beta-lactamase 3475063 10214233 Rahaq_3209 Rahnella sp. Y9602 Beta-lactamase YP_004213930.1 3473855 D 741091 CDS YP_004213931.1 322833904 10214234 3475189..3475452 1 NC_015061.1 PFAM: protein of unknown function DUF493; KEGG: spe:Spro_1197 hypothetical protein; hypothetical protein 3475452 10214234 Rahaq_3210 Rahnella sp. Y9602 hypothetical protein YP_004213931.1 3475189 D 741091 CDS YP_004213932.1 322833905 10214235 3475510..3476208 1 NC_015061.1 TIGRFAM: lipoate-protein ligase B; KEGG: ypb:YPTS_1149 lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; lipoate-protein ligase B 3476208 10214235 Rahaq_3211 Rahnella sp. Y9602 lipoate-protein ligase B YP_004213932.1 3475510 D 741091 CDS YP_004213933.1 322833906 10214236 complement(3476324..3476425) 1 NC_015061.1 hypothetical protein 3476425 10214236 Rahaq_3212 Rahnella sp. Y9602 hypothetical protein YP_004213933.1 3476324 R 741091 CDS YP_004213934.1 322833907 10214237 3476580..3477545 1 NC_015061.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: lipoic acid synthetase; KEGG: spe:Spro_1195 lipoyl synthase; PFAM: Radical SAM domain protein; lipoic acid synthetase 3477545 10214237 Rahaq_3213 Rahnella sp. Y9602 lipoic acid synthetase YP_004213934.1 3476580 D 741091 CDS YP_004213935.1 322833908 10214238 complement(3477643..3477849) 1 NC_015061.1 KEGG: pam:PANA_1117 TatE; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; twin-arginine translocation protein, TatA/E family subunit 3477849 10214238 Rahaq_3214 Rahnella sp. Y9602 twin-arginine translocation protein, TatA/E family subunit YP_004213935.1 3477643 R 741091 CDS YP_004213936.1 322833909 10214239 complement(3478065..3478862) 1 NC_015061.1 KEGG: dda:Dd703_0390 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3478862 10214239 Rahaq_3215 Rahnella sp. Y9602 ABC transporter YP_004213936.1 3478065 R 741091 CDS YP_004213937.1 322833910 10214240 complement(3478859..3479842) 1 NC_015061.1 KEGG: ebi:EbC_12390 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 3479842 10214240 Rahaq_3216 Rahnella sp. Y9602 polar amino acid ABC transporter inner membrane subunit YP_004213937.1 3478859 R 741091 CDS YP_004213938.1 322833911 10214241 complement(3479839..3480747) 1 NC_015061.1 KEGG: ebi:EbC_12380 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 3480747 10214241 Rahaq_3217 Rahnella sp. Y9602 family 3 extracellular solute-binding protein YP_004213938.1 3479839 R 741091 CDS YP_004213939.1 322833912 10214242 complement(3480947..3481741) 1 NC_015061.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ebi:EbC_12370 hydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 3481741 10214242 Rahaq_3218 Rahnella sp. Y9602 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004213939.1 3480947 R 741091 CDS YP_004213940.1 322833913 10214243 complement(3481788..3482846) 1 NC_015061.1 KEGG: dda:Dd703_0386 hypothetical protein; hypothetical protein 3482846 10214243 Rahaq_3219 Rahnella sp. Y9602 hypothetical protein YP_004213940.1 3481788 R 741091 CDS YP_004213941.1 322833914 10214244 3482955..3484301 1 NC_015061.1 KEGG: dda:Dd703_0385 transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 3484301 10214244 Rahaq_3220 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004213941.1 3482955 D 741091 CDS YP_004213942.1 322833915 10214245 complement(3484306..3484728) 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: esa:ESA_01926 hypothetical protein; N-acetyltransferase GCN5 3484728 10214245 Rahaq_3221 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004213942.1 3484306 R 741091 CDS YP_004213943.1 322833916 10214246 3484941..3485324 1 NC_015061.1 KEGG: yen:YE3011 camphor resistance protein CrcB; TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; CrcB protein 3485324 10214246 Rahaq_3222 Rahnella sp. Y9602 CrcB protein YP_004213943.1 3484941 D 741091 CDS YP_004213944.1 322833917 10214247 3485784..3486440 1 NC_015061.1 PFAM: regulatory protein TetR; KEGG: spe:Spro_1191 TetR family transcriptional regulator; TetR family transcriptional regulator 3486440 10214247 Rahaq_3223 Rahnella sp. Y9602 TetR family transcriptional regulator YP_004213944.1 3485784 D 741091 CDS YP_004213945.1 322833918 10214248 3486450..3487637 1 NC_015061.1 KEGG: spe:Spro_1190 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; Bcr/CflA subfamily drug resistance transporter 3487637 10214248 Rahaq_3224 Rahnella sp. Y9602 Bcr/CflA subfamily drug resistance transporter YP_004213945.1 3486450 D 741091 CDS YP_004213946.1 322833919 10214249 complement(3487703..3487912) 1 NC_015061.1 KEGG: ypb:YPTS_1144 cold shock protein CspE; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock protein 3487912 10214249 Rahaq_3225 Rahnella sp. Y9602 cold-shock protein YP_004213946.1 3487703 R 741091 CDS YP_004213947.1 322833920 10214250 complement(3488090..3488833) 1 NC_015061.1 PFAM: Protein of unknown function DUF2076; KEGG: spe:Spro_1006 periplasmic ligand-binding sensor protein; periplasmic ligand-binding sensor protein 3488833 10214250 Rahaq_3226 Rahnella sp. Y9602 periplasmic ligand-binding sensor protein YP_004213947.1 3488090 R 741091 CDS YP_004213948.1 322833921 10214251 complement(3489030..3490160) 1 NC_015061.1 PFAM: periplasmic binding protein; KEGG: pwa:Pecwa_1240 periplasmic binding protein; periplasmic binding protein 3490160 10214251 Rahaq_3227 Rahnella sp. Y9602 periplasmic binding protein YP_004213948.1 3489030 R 741091 CDS YP_004213949.1 322833922 10214252 complement(3490352..3492451) 1 NC_015061.1 KEGG: spe:Spro_2232 prolyl oligopeptidase; PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; prolyl oligopeptidase 3492451 10214252 Rahaq_3228 Rahnella sp. Y9602 prolyl oligopeptidase YP_004213949.1 3490352 R 741091 CDS YP_004213950.1 322833923 10214253 complement(3492568..3493581) 1 NC_015061.1 PFAM: Ppx/GppA phosphatase; KEGG: bba:Bd1525 hypothetical protein; Ppx/GppA phosphatase 3493581 10214253 Rahaq_3229 Rahnella sp. Y9602 Ppx/GppA phosphatase YP_004213950.1 3492568 R 741091 CDS YP_004213951.1 322833924 10214254 3493893..3494138 1 NC_015061.1 KEGG: kva:Kvar_4794 hypothetical protein; hypothetical protein 3494138 10214254 Rahaq_3230 Rahnella sp. Y9602 hypothetical protein YP_004213951.1 3493893 D 741091 CDS YP_004213952.1 322833925 10214255 complement(3494178..3494699) 1 NC_015061.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: esa:ESA_00093 hypothetical protein; cupin 3494699 10214255 Rahaq_3231 Rahnella sp. Y9602 cupin YP_004213952.1 3494178 R 741091 CDS YP_004213953.1 322833926 10214256 complement(3494733..3495086) 1 NC_015061.1 KEGG: asa:ASA_1021 hypothetical protein; hypothetical protein 3495086 10214256 Rahaq_3232 Rahnella sp. Y9602 hypothetical protein YP_004213953.1 3494733 R 741091 CDS YP_004213954.1 322833927 10214257 complement(3495115..3496191) 1 NC_015061.1 TIGRFAM: diguanylate cyclase; PFAM: MASE2 domain protein; GGDEF domain containing protein; KEGG: dda:Dd703_1224 diguanylate cyclase; SMART: GGDEF domain containing protein; diguanylate cyclase 3496191 10214257 Rahaq_3233 Rahnella sp. Y9602 diguanylate cyclase YP_004213954.1 3495115 R 741091 CDS YP_004213955.1 322833928 10214258 complement(3496466..3496873) 1 NC_015061.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: pct:PC1_2917 cupin 2 conserved barrel domain protein; cupin 3496873 10214258 Rahaq_3234 Rahnella sp. Y9602 cupin YP_004213955.1 3496466 R 741091 CDS YP_004213956.1 322833929 10214259 complement(3497214..3497768) 1 NC_015061.1 KEGG: amu:Amuc_0384 maltose O-acetyltransferase; maltose O-acetyltransferase 3497768 10214259 Rahaq_3235 Rahnella sp. Y9602 maltose O-acetyltransferase YP_004213956.1 3497214 R 741091 CDS YP_004213957.1 322833930 10214260 complement(3497817..3499232) 1 NC_015061.1 TIGRFAM: sugar transporter; KEGG: set:SEN2859 arabinose-proton symporter; sugar transporter 3499232 10214260 Rahaq_3236 Rahnella sp. Y9602 sugar transporter YP_004213957.1 3497817 R 741091 CDS YP_004213958.1 322833931 10214261 3499759..3500088 1 NC_015061.1 KEGG: pwa:Pecwa_0482 hypothetical protein; hypothetical protein 3500088 10214261 Rahaq_3237 Rahnella sp. Y9602 hypothetical protein YP_004213958.1 3499759 D 741091 CDS YP_004213959.1 322833932 10214262 3500261..3500974 1 NC_015061.1 PFAM: Conserved hypothetical protein CHP02453; KEGG: shw:Sputw3181_2796 hypothetical protein; hypothetical protein 3500974 10214262 Rahaq_3238 Rahnella sp. Y9602 hypothetical protein YP_004213959.1 3500261 D 741091 CDS YP_004213960.1 322833933 10214263 complement(3501217..3501414) 1 NC_015061.1 KEGG: ent:Ent638_4271 hypothetical protein; hypothetical protein 3501414 10214263 Rahaq_3239 Rahnella sp. Y9602 hypothetical protein YP_004213960.1 3501217 R 741091 CDS YP_004213961.1 322833934 10214264 complement(3501714..3502496) 1 NC_015061.1 KEGG: ebi:EbC_03910 conserved uncharacterized protein; hypothetical protein 3502496 10214264 Rahaq_3240 Rahnella sp. Y9602 hypothetical protein YP_004213961.1 3501714 R 741091 CDS YP_004213962.1 322833935 10214265 3502836..3507392 1 NC_015061.1 KEGG: avn:Avin_12280 hypothetical protein; TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; filamentous hemagglutinin family outer membrane protein 3507392 10214265 Rahaq_3241 Rahnella sp. Y9602 filamentous hemagglutinin family outer membrane protein YP_004213962.1 3502836 D 741091 CDS YP_004213963.1 322833936 10214266 3507396..3509054 1 NC_015061.1 PFAM: Polypeptide-transport-associated domain protein ShlB-type; KEGG: avn:Avin_12270 hypothetical protein; Polypeptide-transport-associated domain protein ShlB-type 3509054 10214266 Rahaq_3242 Rahnella sp. Y9602 Polypeptide-transport-associated domain protein ShlB-type YP_004213963.1 3507396 D 741091 CDS YP_004213964.1 322833937 10214267 3509591..3510238 1 NC_015061.1 KEGG: pam:PANA_2511 hypothetical protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; phosphoesterase PA-phosphatase-like protein 3510238 10214267 Rahaq_3243 Rahnella sp. Y9602 phosphoesterase PA-phosphatase-like protein YP_004213964.1 3509591 D 741091 CDS YP_004213965.1 322833938 10214269 complement(3510599..3511510) 1 NC_015061.1 KEGG: lsg:lse_1635 lactate/malate dehydrogenase family protein; TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; L-lactate dehydrogenase 3511510 10214269 Rahaq_3244 Rahnella sp. Y9602 L-lactate dehydrogenase YP_004213965.1 3510599 R 741091 CDS YP_004213966.1 322833939 10214270 3511696..3512568 1 NC_015061.1 KEGG: yen:YE3045 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; methylenetetrahydrofolate dehydrogenase 3512568 10214270 Rahaq_3245 Rahnella sp. Y9602 methylenetetrahydrofolate dehydrogenase YP_004213966.1 3511696 D 741091 CDS YP_004213967.1 322833940 10214271 3512601..3512819 1 NC_015061.1 KEGG: spe:Spro_1167 hypothetical protein; hypothetical protein 3512819 10214271 Rahaq_3246 Rahnella sp. Y9602 hypothetical protein YP_004213967.1 3512601 D 741091 CDS YP_004213968.1 322833941 10214272 complement(3512919..3513986) 1 NC_015061.1 PFAM: protein of unknown function DUF1176; KEGG: ebi:EbC_33160 conserved uncharacterized protein; hypothetical protein 3513986 10214272 Rahaq_3247 Rahnella sp. Y9602 hypothetical protein YP_004213968.1 3512919 R 741091 CDS YP_004213969.1 322833942 10214273 3514242..3515417 1 NC_015061.1 KEGG: pfo:Pfl01_4299 hypothetical protein; hypothetical protein 3515417 10214273 Rahaq_3248 Rahnella sp. Y9602 hypothetical protein YP_004213969.1 3514242 D 741091 CDS YP_004213970.1 322833943 10214274 complement(3515474..3516064) 1 NC_015061.1 PFAM: NUDIX hydrolase; KEGG: dze:Dd1591_3294 NUDIX hydrolase; NUDIX hydrolase 3516064 10214274 Rahaq_3249 Rahnella sp. Y9602 NUDIX hydrolase YP_004213970.1 3515474 R 741091 CDS YP_004213971.1 322833944 10214275 complement(3516135..3516425) 1 NC_015061.1 PFAM: Uncharacterised conserved protein UCP037266; KEGG: spe:Spro_3491 hypothetical protein; hypothetical protein 3516425 10214275 Rahaq_3250 Rahnella sp. Y9602 hypothetical protein YP_004213971.1 3516135 R 741091 CDS YP_004213972.1 322833945 10214276 3516769..3519924 1 NC_015061.1 KEGG: ypb:YPTS_2869 aminoglycoside/multidrug efflux system; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 3519924 10214276 Rahaq_3251 Rahnella sp. Y9602 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_004213972.1 3516769 D 741091 CDS YP_004213973.1 322833946 10214277 3520373..3520756 1 NC_015061.1 PFAM: arsenate reductase and related; KEGG: eta:ETA_10730 hypothetical protein; arsenate reductase 3520756 10214277 Rahaq_3252 Rahnella sp. Y9602 arsenate reductase YP_004213973.1 3520373 D 741091 CDS YP_004213974.1 322833947 10214278 3520758..3521885 1 NC_015061.1 KEGG: yen:YE1147 succinyl-diaminopimelate desuccinylase; TIGRFAM: succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; succinyl-diaminopimelate desuccinylase 3521885 10214278 Rahaq_3253 Rahnella sp. Y9602 succinyl-diaminopimelate desuccinylase YP_004213974.1 3520758 D 741091 CDS YP_004213975.1 322833948 10214279 3521882..3522556 1 NC_015061.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: ypb:YPTS_2880 peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin; peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin 3522556 10214279 Rahaq_3254 Rahnella sp. Y9602 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin YP_004213975.1 3521882 D 741091 CDS YP_004213976.1 322833949 10214280 3522567..3522752 1 NC_015061.1 KEGG: spe:Spro_3503 hypothetical protein; hypothetical protein 3522752 10214280 Rahaq_3255 Rahnella sp. Y9602 hypothetical protein YP_004213976.1 3522567 D 741091 CDS YP_004213977.1 322833950 10214281 3522852..3524162 1 NC_015061.1 KEGG: slt:Slit_2536 hypothetical protein; hypothetical protein 3524162 10214281 Rahaq_3256 Rahnella sp. Y9602 hypothetical protein YP_004213977.1 3522852 D 741091 CDS YP_004213978.1 322833951 10214282 3524165..3525265 1 NC_015061.1 KEGG: slt:Slit_2537 phosphoserine transaminase; PFAM: aminotransferase class V; Phosphoserine transaminase 3525265 10214282 Rahaq_3257 Rahnella sp. Y9602 Phosphoserine transaminase YP_004213978.1 3524165 D 741091 CDS YP_004213979.1 322833952 10214283 complement(3525345..3525995) 1 NC_015061.1 PFAM: phospholipase/Carboxylesterase; KEGG: ddd:Dda3937_02502 hypothetical protein; phospholipase/Carboxylesterase 3525995 10214283 Rahaq_3258 Rahnella sp. Y9602 phospholipase/Carboxylesterase YP_004213979.1 3525345 R 741091 CDS YP_004213980.1 322833953 10214284 complement(3526104..3528089) 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ypy:YPK_1368 protein of unknown function DUF699 ATPase; N-acetyltransferase GCN5 3528089 10214284 Rahaq_3259 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004213980.1 3526104 R 741091 CDS YP_004213981.1 322833954 10214285 complement(3528091..3528543) 1 NC_015061.1 PFAM: protein of unknown function DUF441; KEGG: pct:PC1_1142 hypothetical protein; hypothetical protein 3528543 10214285 Rahaq_3260 Rahnella sp. Y9602 hypothetical protein YP_004213981.1 3528091 R 741091 CDS YP_004213982.1 322833955 10214286 complement(3528658..3529530) 1 NC_015061.1 PFAM: protein of unknown function zinc metallopeptidase; KEGG: spe:Spro_3506 hypothetical protein; hypothetical protein 3529530 10214286 Rahaq_3261 Rahnella sp. Y9602 hypothetical protein YP_004213982.1 3528658 R 741091 CDS YP_004213983.1 322833956 10214287 complement(3529750..3530463) 1 NC_015061.1 TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: yen:YE1140 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 3530463 10214287 Rahaq_3262 Rahnella sp. Y9602 phosphoribosylaminoimidazolesuccinocarboxamide synthase YP_004213983.1 3529750 R 741091 CDS YP_004213984.1 322833957 10214288 complement(3530520..3531599) 1 NC_015061.1 KEGG: ypz:YPZ3_2697 lipoprotein; lipoprotein 3531599 10214288 Rahaq_3263 Rahnella sp. Y9602 lipoprotein YP_004213984.1 3530520 R 741091 CDS YP_004213985.1 322833958 10214289 complement(3531616..3532497) 1 NC_015061.1 KEGG: spe:Spro_3509 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; dihydrodipicolinate synthase 3532497 10214289 Rahaq_3264 Rahnella sp. Y9602 dihydrodipicolinate synthase YP_004213985.1 3531616 R 741091 CDS YP_004213986.1 322833959 10214290 3532642..3533208 1 NC_015061.1 PFAM: amino acid-binding ACT domain protein; KEGG: spe:Spro_3510 glycine cleavage system transcriptional repressor; amino acid-binding ACT protein 3533208 10214290 Rahaq_3265 Rahnella sp. Y9602 amino acid-binding ACT protein YP_004213986.1 3532642 D 741091 CDS YP_004213987.1 322833960 10214291 3533234..3533701 1 NC_015061.1 KEGG: pam:PANA_2809 Bcp; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; peroxiredoxin 3533701 10214291 Rahaq_3266 Rahnella sp. Y9602 peroxiredoxin YP_004213987.1 3533234 D 741091 CDS YP_004213988.1 322833961 10214292 complement(3533776..3534840) 1 NC_015061.1 PFAM: protein of unknown function UPF0118; KEGG: spe:Spro_3512 hypothetical protein; hypothetical protein 3534840 10214292 Rahaq_3267 Rahnella sp. Y9602 hypothetical protein YP_004213988.1 3533776 R 741091 CDS YP_004213989.1 322833962 10214293 3535095..3536633 1 NC_015061.1 PFAM: peptidase M48 Ste24p; KEGG: spe:Spro_3517 peptidase M48 Ste24p; peptidase M48 Ste24p 3536633 10214293 Rahaq_3268 Rahnella sp. Y9602 peptidase M48 Ste24p YP_004213989.1 3535095 D 741091 CDS YP_004213990.1 322833963 10214294 3536661..3537017 1 NC_015061.1 KEGG: ypb:YPTS_2896 arsenate reductase; TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; arsenate reductase 3537017 10214294 Rahaq_3269 Rahnella sp. Y9602 arsenate reductase YP_004213990.1 3536661 D 741091 CDS YP_004213991.1 322833964 10214295 complement(3537071..3537778) 1 NC_015061.1 KEGG: yen:YE1130 DNA replication initiation factor; TIGRFAM: DnaA regulatory inactivator Hda; PFAM: Chromosomal replication initiator DnaA; DnaA regulatory inactivator Hda 3537778 10214295 Rahaq_3270 Rahnella sp. Y9602 DnaA regulatory inactivator Hda YP_004213991.1 3537071 R 741091 CDS YP_004213992.1 322833965 10214296 complement(3537955..3539247) 1 NC_015061.1 KEGG: spe:Spro_3522 uracil transporter; TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; uracil-xanthine permease 3539247 10214296 Rahaq_3271 Rahnella sp. Y9602 uracil-xanthine permease YP_004213992.1 3537955 R 741091 CDS YP_004213993.1 322833966 10214297 complement(3539327..3539953) 1 NC_015061.1 KEGG: pam:PANA_2826 Upp; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; uracil phosphoribosyltransferase 3539953 10214297 Rahaq_3272 Rahnella sp. Y9602 uracil phosphoribosyltransferase YP_004213993.1 3539327 R 741091 CDS YP_004213994.1 322833967 10214298 3540186..3541223 1 NC_015061.1 TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; KEGG: kpu:KP1_4076 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; phosphoribosylformylglycinamidine cyclo-ligase 3541223 10214298 Rahaq_3273 Rahnella sp. Y9602 phosphoribosylformylglycinamidine cyclo-ligase YP_004213994.1 3540186 D 741091 CDS YP_004213995.1 322833968 10214299 3541260..3541898 1 NC_015061.1 KEGG: spe:Spro_3525 phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; phosphoribosylglycinamide formyltransferase 3541898 10214299 Rahaq_3274 Rahnella sp. Y9602 phosphoribosylglycinamide formyltransferase YP_004213995.1 3541260 D 741091 CDS YP_004213996.1 322833969 10214300 3542119..3542694 1 NC_015061.1 KEGG: yen:YE1124 spermidine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; Diamine N-acetyltransferase 3542694 10214300 Rahaq_3275 Rahnella sp. Y9602 Diamine N-acetyltransferase YP_004213996.1 3542119 D 741091 CDS YP_004213997.1 322833970 10214301 3542743..3542850 1 NC_015061.1 hypothetical protein 3542850 10214301 Rahaq_3276 Rahnella sp. Y9602 hypothetical protein YP_004213997.1 3542743 D 741091 CDS YP_004213998.1 322833971 10214302 3543004..3545073 1 NC_015061.1 TIGRFAM: Polyphosphate kinase; KEGG: spe:Spro_3541 polyphosphate kinase; PFAM: Polyphosphate kinase; polyphosphate kinase 3545073 10214302 Rahaq_3277 Rahnella sp. Y9602 polyphosphate kinase YP_004213998.1 3543004 D 741091 CDS YP_004213999.1 322833972 10214303 3545096..3546640 1 NC_015061.1 KEGG: spe:Spro_3542 exopolyphosphatase; PFAM: Ppx/GppA phosphatase; Ppx/GppA phosphatase 3546640 10214303 Rahaq_3278 Rahnella sp. Y9602 Ppx/GppA phosphatase YP_004213999.1 3545096 D 741091 CDS YP_004214000.1 322833973 10214304 complement(3546716..3548956) 1 NC_015061.1 KEGG: spe:Spro_3543 diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; MASE1 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 3548956 10214304 Rahaq_3279 Rahnella sp. Y9602 diguanylate cyclase/phosphodiesterase YP_004214000.1 3546716 R 741091 CDS YP_004214001.1 322833974 10214305 complement(3549167..3549277) 1 NC_015061.1 hypothetical protein 3549277 10214305 Rahaq_3280 Rahnella sp. Y9602 hypothetical protein YP_004214001.1 3549167 R 741091 CDS YP_004214002.1 322833975 10214306 3549461..3549679 1 NC_015061.1 KEGG: etr:ETAE_0948 hypothetical protein; hypothetical protein 3549679 10214306 Rahaq_3281 Rahnella sp. Y9602 hypothetical protein YP_004214002.1 3549461 D 741091 CDS YP_004214003.1 322833976 10214307 3549689..3551128 1 NC_015061.1 KEGG: spe:Spro_3545 magnesium transporter; TIGRFAM: magnesium transporter; PFAM: MgtE intracellular region; CBS domain containing protein; MgtE integral membrane region; magnesium transporter 3551128 10214307 Rahaq_3282 Rahnella sp. Y9602 magnesium transporter YP_004214003.1 3549689 D 741091 CDS YP_004214004.1 322833977 10214308 3551333..3553615 1 NC_015061.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; PAS fold-3 domain protein; MASE1 domain protein; KEGG: cro:ROD_22031 signal transduction protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 3553615 10214308 Rahaq_3283 Rahnella sp. Y9602 PAS/PAC sensor-containing diguanylate cyclase YP_004214004.1 3551333 D 741091 CDS YP_004214005.1 322833978 10214309 complement(3553623..3554495) 1 NC_015061.1 PFAM: AlkA domain protein; HhH-GPD family protein; KEGG: spe:Spro_3547 AraC family transcriptional regulator; SMART: HhH-GPD family protein; DNA-3-methyladenine glycosylase II 3554495 10214309 Rahaq_3284 Rahnella sp. Y9602 DNA-3-methyladenine glycosylase II YP_004214005.1 3553623 R 741091 CDS YP_004214006.1 322833979 10214310 complement(3554564..3555955) 1 NC_015061.1 TIGRFAM: cysteinyl-tRNA synthetase; KEGG: spe:Spro_1166 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR; cysteinyl-tRNA synthetase 3555955 10214310 Rahaq_3285 Rahnella sp. Y9602 cysteinyl-tRNA synthetase YP_004214006.1 3554564 R 741091 CDS YP_004214007.1 322833980 10214311 3556183..3556677 1 NC_015061.1 KEGG: yen:YE3049 peptidyl-prolyl cis-trans isomerase B (rotamase B); PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; Peptidylprolyl isomerase 3556677 10214311 Rahaq_3286 Rahnella sp. Y9602 Peptidylprolyl isomerase YP_004214007.1 3556183 D 741091 CDS YP_004214008.1 322833981 10214312 3556689..3557411 1 NC_015061.1 KEGG: spe:Spro_1164 UDP-2,3-diacylglucosamine hydrolase; TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; PFAM: metallophosphoesterase; UDP-2,3-diacylglucosamine hydrolase 3557411 10214312 Rahaq_3287 Rahnella sp. Y9602 UDP-2,3-diacylglucosamine hydrolase YP_004214008.1 3556689 D 741091 CDS YP_004214009.1 322833982 10214313 complement(3557523..3558155) 1 NC_015061.1 PFAM: tRNA-hydroxylase; KEGG: aha:AHA_1871 tRNA-hydroxylase; tRNA-hydroxylase 3558155 10214313 Rahaq_3288 Rahnella sp. Y9602 tRNA-hydroxylase YP_004214009.1 3557523 R 741091 CDS YP_004214010.1 322833983 10214314 complement(3558124..3558288) 1 NC_015061.1 hypothetical protein 3558288 10214314 Rahaq_3289 Rahnella sp. Y9602 hypothetical protein YP_004214010.1 3558124 R 741091 CDS YP_004214011.1 322833984 10214315 3558336..3558845 1 NC_015061.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: ddd:Dda3937_01682 N5-carboxyaminoimidazole ribonucleotide mutase; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 3558845 10214315 Rahaq_3290 Rahnella sp. Y9602 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_004214011.1 3558336 D 741091 CDS YP_004214012.1 322833985 10214316 3558842..3559906 1 NC_015061.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: ebi:EbC_11210 phosphoribosylaminoimidazole carboxylase ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; phosphoribosylaminoimidazole carboxylase ATPase subunit 3559906 10214316 Rahaq_3291 Rahnella sp. Y9602 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_004214012.1 3558842 D 741091 CDS YP_004214013.1 322833986 10214317 complement(3560052..3562484) 1 NC_015061.1 PFAM: protein of unknown function DUF214; KEGG: spe:Spro_1159 hypothetical protein; hypothetical protein 3562484 10214317 Rahaq_3292 Rahnella sp. Y9602 hypothetical protein YP_004214013.1 3560052 R 741091 CDS YP_004214014.1 322833987 10214318 complement(3562481..3563167) 1 NC_015061.1 KEGG: spe:Spro_1158 ABC transporter ATP-binding protein YbbA; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3563167 10214318 Rahaq_3293 Rahnella sp. Y9602 ABC transporter YP_004214014.1 3562481 R 741091 CDS YP_004214015.1 322833988 10214319 3563180..3563767 1 NC_015061.1 KEGG: yen:YE3055 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; PFAM: lipolytic protein G-D-S-L family; lysophospholipase 3563767 10214319 Rahaq_3294 Rahnella sp. Y9602 lysophospholipase YP_004214015.1 3563180 D 741091 CDS YP_004214016.1 322833989 10214320 3563890..3564666 1 NC_015061.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: spe:Spro_1156 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 3564666 10214320 Rahaq_3295 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004214016.1 3563890 D 741091 CDS YP_004214017.1 322833990 10214321 3564754..3565611 1 NC_015061.1 PFAM: Thioredoxin domain-containing protein; KEGG: spe:Spro_1155 thioredoxin domain-containing protein; thioredoxin domain-containing protein 3565611 10214321 Rahaq_3296 Rahnella sp. Y9602 thioredoxin domain-containing protein YP_004214017.1 3564754 D 741091 CDS YP_004214018.1 322833991 10214322 3565848..3566768 1 NC_015061.1 KEGG: spe:Spro_1153 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein; hypothetical protein 3566768 10214322 Rahaq_3297 Rahnella sp. Y9602 hypothetical protein YP_004214018.1 3565848 D 741091 CDS YP_004214019.1 322833992 10214323 3566768..3567223 1 NC_015061.1 PFAM: protein of unknown function DUF107; KEGG: spe:Spro_1152 hypothetical protein; hypothetical protein 3567223 10214323 Rahaq_3298 Rahnella sp. Y9602 hypothetical protein YP_004214019.1 3566768 D 741091 CDS YP_004214020.1 322833993 10214324 complement(3567220..3567624) 1 NC_015061.1 TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: ent:Ent638_0963 DNA-binding transcriptional regulator CueR; SMART: regulatory protein MerR; MerR family transcriptional regulator 3567624 10214324 Rahaq_3299 Rahnella sp. Y9602 MerR family transcriptional regulator YP_004214020.1 3567220 R 741091 CDS YP_004214021.1 322833994 10214325 3567716..3570259 1 NC_015061.1 KEGG: yen:YE3061 copper exporting ATPase; TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; copper-translocating P-type ATPase 3570259 10214325 Rahaq_3300 Rahnella sp. Y9602 copper-translocating P-type ATPase YP_004214021.1 3567716 D 741091 CDS YP_004214022.1 322833995 10214326 3570309..3571115 1 NC_015061.1 PFAM: GumN family protein; KEGG: enc:ECL_01252 GumN family protein; GumN family protein 3571115 10214326 Rahaq_3301 Rahnella sp. Y9602 GumN family protein YP_004214022.1 3570309 D 741091 CDS YP_004214023.1 322833996 10214327 3571392..3571871 1 NC_015061.1 KEGG: spe:Spro_1148 hypothetical protein; TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; ybaK/ebsC protein 3571871 10214327 Rahaq_3302 Rahnella sp. Y9602 ybaK/ebsC protein YP_004214023.1 3571392 D 741091 CDS YP_004214024.1 322833997 10214328 3571917..3573128 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: pay:PAU_00978 fosmidomycin resistance protein; major facilitator superfamily protein 3573128 10214328 Rahaq_3303 Rahnella sp. Y9602 major facilitator superfamily protein YP_004214024.1 3571917 D 741091 CDS YP_004214025.1 322833998 10214329 3573366..3575057 1 NC_015061.1 KEGG: spe:Spro_1145 cation:proton antiport protein; TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; potassium efflux system protein 3575057 10214329 Rahaq_3304 Rahnella sp. Y9602 potassium efflux system protein YP_004214025.1 3573366 D 741091 CDS YP_004214026.1 322833999 10214330 complement(3575188..3576507) 1 NC_015061.1 KEGG: yen:YE3069 inosine-guanosine kinase; PFAM: PfkB domain protein; Inosine kinase 3576507 10214330 Rahaq_3305 Rahnella sp. Y9602 Inosine kinase YP_004214026.1 3575188 R 741091 CDS YP_004214027.1 322834000 10214331 complement(3576546..3577508) 1 NC_015061.1 TIGRFAM: ferrochelatase; KEGG: yen:YE3088 ferrochelatase; PFAM: ferrochelatase; ferrochelatase 3577508 10214331 Rahaq_3306 Rahnella sp. Y9602 ferrochelatase YP_004214027.1 3576546 R 741091 CDS YP_004214028.1 322834001 10214332 complement(3577780..3578424) 1 NC_015061.1 KEGG: ctu:Ctu_10810 adenylate kinase; TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain-containing protein; adenylate kinase 3578424 10214332 Rahaq_3307 Rahnella sp. Y9602 adenylate kinase YP_004214028.1 3577780 R 741091 CDS YP_004214029.1 322834002 10214333 complement(3578712..3580583) 1 NC_015061.1 KEGG: yen:YE3090 heat shock protein 90; PFAM: Heat shock protein Hsp90-like; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; Heat shock protein Hsp90-like protein 3580583 10214333 Rahaq_3308 Rahnella sp. Y9602 Heat shock protein Hsp90-like protein YP_004214029.1 3578712 R 741091 CDS YP_004214030.1 322834003 10214334 complement(3580745..3581350) 1 NC_015061.1 TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain-containing protein; Zinc finger C4-type, RecR; KEGG: ebi:EbC_10460 recombination protein RecR; SMART: Toprim sub domain-containing protein; recombination protein RecR 3581350 10214334 Rahaq_3309 Rahnella sp. Y9602 recombination protein RecR YP_004214030.1 3580745 R 741091 CDS YP_004214031.1 322834004 10214335 complement(3581350..3581679) 1 NC_015061.1 PFAM: Uncharacterised protein family UPF0133; KEGG: sgl:SG0690 hypothetical protein; hypothetical protein 3581679 10214335 Rahaq_3310 Rahnella sp. Y9602 hypothetical protein YP_004214031.1 3581350 R 741091 CDS YP_004214032.1 322834005 10214336 complement(3581721..3583670) 1 NC_015061.1 TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase; KEGG: spe:Spro_1135 DNA polymerase III subunits gamma and tau; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau 3583670 10214336 Rahaq_3311 Rahnella sp. Y9602 DNA polymerase III subunits gamma and tau YP_004214032.1 3581721 R 741091 CDS YP_004214033.1 322834006 10214337 3583993..3586056 1 NC_015061.1 KEGG: spe:Spro_0054 periplasmic alpha-amylase precursor; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; alpha amylase 3586056 10214337 Rahaq_3312 Rahnella sp. Y9602 alpha amylase YP_004214033.1 3583993 D 741091 CDS YP_004214034.1 322834007 10214338 complement(3586119..3586670) 1 NC_015061.1 KEGG: spe:Spro_1134 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; adenine phosphoribosyltransferase 3586670 10214338 Rahaq_3313 Rahnella sp. Y9602 adenine phosphoribosyltransferase YP_004214034.1 3586119 R 741091 CDS YP_004214035.1 322834008 10214339 complement(3586854..3587222) 1 NC_015061.1 PFAM: protein of unknown function DUF454; KEGG: cko:CKO_02681 hypothetical protein; hypothetical protein 3587222 10214339 Rahaq_3314 Rahnella sp. Y9602 hypothetical protein YP_004214035.1 3586854 R 741091 CDS YP_004214036.1 322834009 10214340 3587337..3587873 1 NC_015061.1 PFAM: Primosomal replication priB and priC; KEGG: spe:Spro_1132 primosomal replication PriB and PriC; primosomal replication priB and priC 3587873 10214340 Rahaq_3315 Rahnella sp. Y9602 primosomal replication priB and priC YP_004214036.1 3587337 D 741091 CDS YP_004214037.1 322834010 10214341 3587957..3588142 1 NC_015061.1 PFAM: Protein of unknown function DUF2496, YbaM-related; KEGG: ypm:YP_0803 hypothetical protein; hypothetical protein 3588142 10214341 Rahaq_3316 Rahnella sp. Y9602 hypothetical protein YP_004214037.1 3587957 D 741091 CDS YP_004214038.1 322834011 10214342 complement(3588203..3591598) 1 NC_015061.1 PFAM: MscS Mechanosensitive ion channel; KEGG: ypy:YPK_3204 potassium efflux protein KefA; mechanosensitive ion channel protein MscS 3591598 10214342 Rahaq_3317 Rahnella sp. Y9602 mechanosensitive ion channel protein MscS YP_004214038.1 3588203 R 741091 CDS YP_004214039.1 322834012 10214343 complement(3591768..3592406) 1 NC_015061.1 PFAM: Tetracycline transcriptional repressor MAATS-type domain-containing protein; regulatory protein TetR; KEGG: yen:YE3099 DNA-binding transcriptional repressor AcrR; TetR family transcriptional regulator 3592406 10214343 Rahaq_3318 Rahnella sp. Y9602 TetR family transcriptional regulator YP_004214039.1 3591768 R 741091 CDS YP_004214040.1 322834013 10214344 3592548..3593723 1 NC_015061.1 KEGG: spe:Spro_1127 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 3593723 10214344 Rahaq_3319 Rahnella sp. Y9602 RND family efflux transporter MFP subunit YP_004214040.1 3592548 D 741091 CDS YP_004214041.1 322834014 10214345 3593740..3596892 1 NC_015061.1 KEGG: enc:ECL_01233 AcrB protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 3596892 10214345 Rahaq_3320 Rahnella sp. Y9602 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_004214041.1 3593740 D 741091 CDS YP_004214042.1 322834015 10214346 3597014..3597268 1 NC_015061.1 KEGG: ypb:YPTS_1024 50S ribosomal protein L31 type B; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; 50S ribosomal protein L31 3597268 10214346 Rahaq_3321 Rahnella sp. Y9602 50S ribosomal protein L31 YP_004214042.1 3597014 D 741091 CDS YP_004214043.1 322834016 10214347 3597289..3597429 1 NC_015061.1 KEGG: spe:Spro_1124 50S ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; 50S ribosomal protein L36 3597429 10214347 Rahaq_3322 Rahnella sp. Y9602 50S ribosomal protein L36 YP_004214043.1 3597289 D 741091 CDS YP_004214044.1 322834017 10214348 complement(3597554..3598432) 1 NC_015061.1 PFAM: periplasmic solute binding protein; KEGG: spe:Spro_1123 periplasmic solute binding protein; periplasmic solute binding protein 3598432 10214348 Rahaq_3323 Rahnella sp. Y9602 periplasmic solute binding protein YP_004214044.1 3597554 R 741091 CDS YP_004214045.1 322834018 10214349 complement(3598476..3599333) 1 NC_015061.1 PFAM: ABC transporter; KEGG: yen:YE3110 ABC-transporter membrane protein; ABC transporter 3599333 10214349 Rahaq_3324 Rahnella sp. Y9602 ABC transporter YP_004214045.1 3598476 R 741091 CDS YP_004214046.1 322834019 10214350 complement(3599330..3600091) 1 NC_015061.1 KEGG: yen:YE3111 ABC transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3600091 10214350 Rahaq_3325 Rahnella sp. Y9602 ABC transporter YP_004214046.1 3599330 R 741091 CDS YP_004214047.1 322834020 10214351 3600441..3600794 1 NC_015061.1 KEGG: spe:Spro_1120 hypothetical protein; hypothetical protein 3600794 10214351 Rahaq_3326 Rahnella sp. Y9602 hypothetical protein YP_004214047.1 3600441 D 741091 CDS YP_004214048.1 322834021 10214352 3601024..3601392 1 NC_015061.1 PFAM: Biofilm formation regulator YbaJ; KEGG: yen:YE3114 hypothetical protein; Biofilm formation regulator YbaJ 3601392 10214352 Rahaq_3327 Rahnella sp. Y9602 Biofilm formation regulator YbaJ YP_004214048.1 3601024 D 741091 CDS YP_004214049.1 322834022 10214353 3601438..3601641 1 NC_015061.1 PFAM: Haemolysin expression modulating family protein; KEGG: spe:Spro_1118 hemolysin expression-modulating protein; hemolysin expression modulating family protein 3601641 10214353 Rahaq_3328 Rahnella sp. Y9602 hemolysin expression modulating family protein YP_004214049.1 3601438 D 741091 CDS YP_004214050.1 322834023 10214354 complement(3601717..3602673) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebi:EbC_19580 transcriptional regulator, LysR family; LysR family transcriptional regulator 3602673 10214354 Rahaq_3329 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004214050.1 3601717 R 741091 CDS YP_004214051.1 322834024 10214355 3602813..3604600 1 NC_015061.1 KEGG: ebi:EbC_19590 adenine deaminase; PFAM: amidohydrolase; adenine deaminase 3604600 10214355 Rahaq_3330 Rahnella sp. Y9602 adenine deaminase YP_004214051.1 3602813 D 741091 CDS YP_004214052.1 322834025 10214356 3604677..3606026 1 NC_015061.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: ebi:EbC_19600 xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease 3606026 10214356 Rahaq_3331 Rahnella sp. Y9602 xanthine/uracil/vitamin C permease YP_004214052.1 3604677 D 741091 CDS YP_004214053.1 322834026 10214358 3606443..3606751 1 NC_015061.1 KEGG: esa:ESA_02839 hypothetical protein; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylated-DNA--protein-cysteine methyltransferase 3606751 10214358 Rahaq_3332 Rahnella sp. Y9602 methylated-DNA--protein-cysteine methyltransferase YP_004214053.1 3606443 D 741091 CDS YP_004214054.1 322834027 10214359 complement(3606820..3607401) 1 NC_015061.1 KEGG: spe:Spro_1112 lipoprotein; lipoprotein 3607401 10214359 Rahaq_3333 Rahnella sp. Y9602 lipoprotein YP_004214054.1 3606820 R 741091 CDS YP_004214055.1 322834028 10214360 3607673..3608539 1 NC_015061.1 KEGG: spe:Spro_1111 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase; acyl-CoA thioesterase 3608539 10214360 Rahaq_3334 Rahnella sp. Y9602 acyl-CoA thioesterase YP_004214055.1 3607673 D 741091 CDS YP_004214056.1 322834029 10214361 complement(3608680..3609969) 1 NC_015061.1 KEGG: spe:Spro_1110 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter; ammonium transporter 3609969 10214361 Rahaq_3335 Rahnella sp. Y9602 ammonium transporter YP_004214056.1 3608680 R 741091 CDS YP_004214057.1 322834030 10214362 complement(3610055..3610393) 1 NC_015061.1 PFAM: nitrogen regulatory protein P-II; KEGG: dze:Dd1591_3057 nitrogen regulatory protein P-II 2; nitrogen regulatory protein P-II 3610393 10214362 Rahaq_3336 Rahnella sp. Y9602 nitrogen regulatory protein P-II YP_004214057.1 3610055 R 741091 CDS YP_004214058.1 322834031 10214363 complement(3610390..3610587) 1 NC_015061.1 hypothetical protein 3610587 10214363 Rahaq_3337 Rahnella sp. Y9602 hypothetical protein YP_004214058.1 3610390 R 741091 CDS YP_004214059.1 322834032 10214364 3610644..3610760 1 NC_015061.1 hypothetical protein 3610760 10214364 Rahaq_3338 Rahnella sp. Y9602 hypothetical protein YP_004214059.1 3610644 D 741091 CDS YP_004214060.1 322834033 10214365 complement(3610735..3612534) 1 NC_015061.1 KEGG: spe:Spro_1108 multidrug transporter membrane\ATP-binding components; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter 3612534 10214365 Rahaq_3339 Rahnella sp. Y9602 ABC transporter YP_004214060.1 3610735 R 741091 CDS YP_004214061.1 322834034 10214366 complement(3612527..3614299) 1 NC_015061.1 KEGG: spe:Spro_1107 multidrug transporter membrane\ATP-binding components; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter 3614299 10214366 Rahaq_3340 Rahnella sp. Y9602 ABC transporter YP_004214061.1 3612527 R 741091 CDS YP_004214062.1 322834035 10214367 complement(3614436..3614891) 1 NC_015061.1 KEGG: enc:ECL_01207 transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 3614891 10214367 Rahaq_3341 Rahnella sp. Y9602 AsnC family transcriptional regulator YP_004214062.1 3614436 R 741091 CDS YP_004214063.1 322834036 10214368 3615012..3616055 1 NC_015061.1 PFAM: Pyridoxal-5'-phosphate-dependent protein subunit beta; KEGG: pct:PC1_1056 pyridoxal-5'-phosphate-dependent protein subunit beta; pyridoxal-5'-phosphate-dependent protein subunit beta 3616055 10214368 Rahaq_3342 Rahnella sp. Y9602 pyridoxal-5'-phosphate-dependent protein subunit beta YP_004214063.1 3615012 D 741091 CDS YP_004214064.1 322834037 10214369 complement(3616226..3617047) 1 NC_015061.1 KEGG: spe:Spro_1104 Cof-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase 3617047 10214369 Rahaq_3343 Rahnella sp. Y9602 cof family hydrolase YP_004214064.1 3616226 R 741091 CDS YP_004214065.1 322834038 10214370 3617240..3618952 1 NC_015061.1 PFAM: extracellular solute-binding protein family 5; KEGG: spe:Spro_1103 extracellular solute-binding protein; family 5 extracellular solute-binding protein 3618952 10214370 Rahaq_3344 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004214065.1 3617240 D 741091 CDS YP_004214066.1 322834039 10214371 3619063..3619761 1 NC_015061.1 KEGG: spe:Spro_1102 queuosine biosynthesis protein QueC; TIGRFAM: exsB protein; PFAM: Queuosine synthesis-like; exsB protein 3619761 10214371 Rahaq_3345 Rahnella sp. Y9602 exsB protein YP_004214066.1 3619063 D 741091 CDS YP_004214067.1 322834040 10214372 complement(3619859..3620260) 1 NC_015061.1 PFAM: thioesterase superfamily protein; KEGG: yen:YE3128 hypothetical protein; thioesterase superfamily protein 3620260 10214372 Rahaq_3346 Rahnella sp. Y9602 thioesterase superfamily protein YP_004214067.1 3619859 R 741091 CDS YP_004214068.1 322834041 10214373 complement(3620379..3620762) 1 NC_015061.1 TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; KEGG: pwa:Pecwa_3259 competence protein ComEA helix-hairpin-helix repeat protein; competence protein ComEA 3620762 10214373 Rahaq_3347 Rahnella sp. Y9602 competence protein ComEA YP_004214068.1 3620379 R 741091 CDS YP_004214069.1 322834042 10214374 complement(3620902..3622782) 1 NC_015061.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: spe:Spro_1099 peptidyl-prolyl cis-trans isomerase (rotamase D); PpiC-type peptidyl-prolyl cis-trans isomerase 3622782 10214374 Rahaq_3348 Rahnella sp. Y9602 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004214069.1 3620902 R 741091 CDS YP_004214070.1 322834043 10214375 complement(3622947..3623222) 1 NC_015061.1 KEGG: cro:ROD_04951 DNA-binding protein HU-beta; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; histone family protein DNA-binding protein 3623222 10214375 Rahaq_3349 Rahnella sp. Y9602 histone family protein DNA-binding protein YP_004214070.1 3622947 R 741091 CDS YP_004214071.1 322834044 10214376 complement(3623439..3625793) 1 NC_015061.1 SMART: peptidase S16 lon domain protein; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: spe:Spro_1097 DNA-binding ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase; ATP-dependent protease La 3625793 10214376 Rahaq_3350 Rahnella sp. Y9602 ATP-dependent protease La YP_004214071.1 3623439 R 741091 CDS YP_004214072.1 322834045 10214377 complement(3625985..3627259) 1 NC_015061.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; KEGG: yen:YE3133 ATP-dependent protease ATP-binding subunit ClpX; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding subunit ClpX 3627259 10214377 Rahaq_3351 Rahnella sp. Y9602 ATP-dependent Clp protease ATP-binding subunit ClpX YP_004214072.1 3625985 R 741091 CDS YP_004214073.1 322834046 10214378 complement(3627465..3628088) 1 NC_015061.1 TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; KEGG: yen:YE3134 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP; ATP-dependent Clp protease, proteolytic subunit ClpP 3628088 10214378 Rahaq_3352 Rahnella sp. Y9602 ATP-dependent Clp protease, proteolytic subunit ClpP YP_004214073.1 3627465 R 741091 CDS YP_004214074.1 322834047 10214379 complement(3628502..3629806) 1 NC_015061.1 KEGG: ypb:YPTS_0999 trigger factor; TIGRFAM: trigger factor; PFAM: trigger factor domain-containing protein; peptidylprolyl isomerase FKBP-type; trigger factor 3629806 10214379 Rahaq_3353 Rahnella sp. Y9602 trigger factor YP_004214074.1 3628502 R 741091 CDS YP_004214075.1 322834048 10214380 complement(3630239..3630553) 1 NC_015061.1 PFAM: BolA family protein; KEGG: spe:Spro_1093 transcriptional regulator BolA; BolA family protein 3630553 10214380 Rahaq_3354 Rahnella sp. Y9602 BolA family protein YP_004214075.1 3630239 R 741091 CDS YP_004214076.1 322834049 10214381 3630882..3631460 1 NC_015061.1 PFAM: Uncharacterized lipoprotein; KEGG: spe:Spro_1092 hypothetical protein; lipoprotein 3631460 10214381 Rahaq_3355 Rahnella sp. Y9602 lipoprotein YP_004214076.1 3630882 D 741091 CDS YP_004214077.1 322834050 10214382 3631609..3633087 1 NC_015061.1 KEGG: spe:Spro_1091 muropeptide transporter; TIGRFAM: AmpG-related permease; PFAM: major facilitator superfamily MFS_1; AmpG-related permease 3633087 10214382 Rahaq_3356 Rahnella sp. Y9602 AmpG-related permease YP_004214077.1 3631609 D 741091 CDS YP_004214078.1 322834051 10214383 3633521..3634480 1 NC_015061.1 KEGG: spe:Spro_1090 cytochrome o ubiquinol oxidase subunit II; TIGRFAM: ubiquinol oxidase, subunit II; PFAM: COX aromatic rich domain protein; cytochrome c oxidase subunit II; ubiquinol oxidase subunit II 3634480 10214383 Rahaq_3357 Rahnella sp. Y9602 ubiquinol oxidase subunit II YP_004214078.1 3633521 D 741091 CDS YP_004214079.1 322834052 10214384 3634484..3636475 1 NC_015061.1 TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; KEGG: spe:Spro_1089 cytochrome o ubiquinol oxidase subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome o ubiquinol oxidase subunit I 3636475 10214384 Rahaq_3358 Rahnella sp. Y9602 cytochrome o ubiquinol oxidase subunit I YP_004214079.1 3634484 D 741091 CDS YP_004214080.1 322834053 10214385 3636465..3637079 1 NC_015061.1 KEGG: spe:Spro_1088 cytochrome o ubiquinol oxidase subunit III; TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; cytochrome o ubiquinol oxidase subunit III 3637079 10214385 Rahaq_3359 Rahnella sp. Y9602 cytochrome o ubiquinol oxidase subunit III YP_004214080.1 3636465 D 741091 CDS YP_004214081.1 322834054 10214386 3637079..3637411 1 NC_015061.1 KEGG: spe:Spro_1087 cytochrome o ubiquinol oxidase subunit IV; TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; cytochrome o ubiquinol oxidase subunit IV 3637411 10214386 Rahaq_3360 Rahnella sp. Y9602 cytochrome o ubiquinol oxidase subunit IV YP_004214081.1 3637079 D 741091 CDS YP_004214082.1 322834055 10214387 3637430..3638314 1 NC_015061.1 KEGG: spe:Spro_1086 protoheme IX farnesyltransferase; TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; protoheme IX farnesyltransferase 3638314 10214387 Rahaq_3361 Rahnella sp. Y9602 protoheme IX farnesyltransferase YP_004214082.1 3637430 D 741091 CDS YP_004214083.1 322834056 10214388 3638487..3639851 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_1085 major facilitator transporter; major facilitator superfamily protein 3639851 10214388 Rahaq_3362 Rahnella sp. Y9602 major facilitator superfamily protein YP_004214083.1 3638487 D 741091 CDS YP_004214084.1 322834057 10214389 3640021..3641319 1 NC_015061.1 PFAM: Oxidoreductase domain; oxidoreductase domain protein; KEGG: cro:ROD_34531 oxidoreductase; Oxidoreductase domain protein 3641319 10214389 Rahaq_3363 Rahnella sp. Y9602 Oxidoreductase domain protein YP_004214084.1 3640021 D 741091 CDS YP_004214085.1 322834058 10214390 complement(3641609..3642613) 1 NC_015061.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ddd:Dda3937_00500 ISEch4 transposase; transposase IS116/IS110/IS902 family protein 3642613 10214390 Rahaq_3364 Rahnella sp. Y9602 transposase IS116/IS110/IS902 family protein YP_004214085.1 3641609 R 741091 CDS YP_004214086.1 322834059 10214391 complement(3642731..3643222) 1 NC_015061.1 PFAM: protein of unknown function DUF520; KEGG: eca:ECA1137 nucleotide-binding protein; hypothetical protein 3643222 10214391 Rahaq_3365 Rahnella sp. Y9602 hypothetical protein YP_004214086.1 3642731 R 741091 CDS YP_004214087.1 322834060 10214392 3643323..3643466 1 NC_015061.1 hypothetical protein 3643466 10214392 Rahaq_3366 Rahnella sp. Y9602 hypothetical protein YP_004214087.1 3643323 D 741091 CDS YP_004214088.1 322834061 10214393 3643463..3644374 1 NC_015061.1 TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: spe:Spro_1083 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase 3644374 10214393 Rahaq_3367 Rahnella sp. Y9602 2-dehydropantoate 2-reductase YP_004214088.1 3643463 D 741091 CDS YP_004214089.1 322834062 10214394 3644337..3644945 1 NC_015061.1 KEGG: spe:Spro_1082 DJ-1 family protein; TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain-containing protein; DJ-1 family protein 3644945 10214394 Rahaq_3368 Rahnella sp. Y9602 DJ-1 family protein YP_004214089.1 3644337 D 741091 CDS YP_004214090.1 322834063 10214395 complement(3645012..3646460) 1 NC_015061.1 KEGG: eca:ECA1134 thiamine biosynthesis protein ThiI; TIGRFAM: thiamine biosynthesis/tRNA modification protein ThiI; PFAM: Thiamine biosynthesis protein-like; THUMP domain-containing protein; thiamine biosynthesis/tRNA modification protein ThiI 3646460 10214395 Rahaq_3369 Rahnella sp. Y9602 thiamine biosynthesis/tRNA modification protein ThiI YP_004214090.1 3645012 R 741091 CDS YP_004214091.1 322834064 10214396 3646737..3646979 1 NC_015061.1 KEGG: ctu:Ctu_09980 exodeoxyribonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; exodeoxyribonuclease VII small subunit 3646979 10214396 Rahaq_3370 Rahnella sp. Y9602 exodeoxyribonuclease VII small subunit YP_004214091.1 3646737 D 741091 CDS YP_004214092.1 322834065 10214397 3646985..3647914 1 NC_015061.1 PFAM: Polyprenyl synthetase; KEGG: spe:Spro_1079 geranyltranstransferase; polyprenyl synthetase 3647914 10214397 Rahaq_3371 Rahnella sp. Y9602 polyprenyl synthetase YP_004214092.1 3646985 D 741091 CDS YP_004214093.1 322834066 10214398 3647933..3649795 1 NC_015061.1 KEGG: spe:Spro_1078 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain-containing protein; deoxyxylulose-5-phosphate synthase 3649795 10214398 Rahaq_3372 Rahnella sp. Y9602 deoxyxylulose-5-phosphate synthase YP_004214093.1 3647933 D 741091 CDS YP_004214094.1 322834067 10214399 3649948..3650922 1 NC_015061.1 PFAM: aldo/keto reductase; KEGG: spe:Spro_1077 aldo/keto reductase; aldo/keto reductase 3650922 10214399 Rahaq_3373 Rahnella sp. Y9602 aldo/keto reductase YP_004214094.1 3649948 D 741091 CDS YP_004214095.1 322834068 10214400 complement(3650992..3651552) 1 NC_015061.1 KEGG: spe:Spro_1076 phosphatidylglycerophosphatase A; PFAM: phosphatidylglycerophosphatase A; Phosphatidylglycerophosphatase 3651552 10214400 Rahaq_3374 Rahnella sp. Y9602 Phosphatidylglycerophosphatase YP_004214095.1 3650992 R 741091 CDS YP_004214096.1 322834069 10214401 complement(3651549..3652535) 1 NC_015061.1 TIGRFAM: thiamine-monophosphate kinase; KEGG: spe:Spro_1075 thiamine monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; thiamine-monophosphate kinase 3652535 10214401 Rahaq_3375 Rahnella sp. Y9602 thiamine-monophosphate kinase YP_004214096.1 3651549 R 741091 CDS YP_004214097.1 322834070 10214402 complement(3652701..3653114) 1 NC_015061.1 KEGG: dze:Dd1591_3088 transcription antitermination protein NusB; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; NusB antitermination factor 3653114 10214402 Rahaq_3376 Rahnella sp. Y9602 NusB antitermination factor YP_004214097.1 3652701 R 741091 CDS YP_004214098.1 322834071 10214403 complement(3653135..3653605) 1 NC_015061.1 KEGG: ypb:YPTS_0976 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase 3653605 10214403 Rahaq_3377 Rahnella sp. Y9602 6,7-dimethyl-8-ribityllumazine synthase YP_004214098.1 3653135 R 741091 CDS YP_004214099.1 322834072 10214404 complement(3653729..3654865) 1 NC_015061.1 TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: spe:Spro_1072 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; riboflavin biosynthesis protein RibD 3654865 10214404 Rahaq_3378 Rahnella sp. Y9602 riboflavin biosynthesis protein RibD YP_004214099.1 3653729 R 741091 CDS YP_004214100.1 322834073 10214405 complement(3654875..3655324) 1 NC_015061.1 PFAM: ATP-cone domain protein; KEGG: spe:Spro_1071 transcriptional regulator NrdR; ATP-cone domain-containing protein 3655324 10214405 Rahaq_3379 Rahnella sp. Y9602 ATP-cone domain-containing protein YP_004214100.1 3654875 R 741091 CDS YP_004214101.1 322834074 10214406 3655485..3656048 1 NC_015061.1 KEGG: dze:Dd1591_3093 hypothetical protein; hypothetical protein 3656048 10214406 Rahaq_3380 Rahnella sp. Y9602 hypothetical protein YP_004214101.1 3655485 D 741091 CDS YP_004214102.1 322834075 10214407 complement(3656130..3657104) 1 NC_015061.1 KEGG: spe:Spro_1064 preprotein translocase subunit SecF; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecF 3657104 10214407 Rahaq_3381 Rahnella sp. Y9602 protein-export membrane protein SecF YP_004214102.1 3656130 R 741091 CDS YP_004214103.1 322834076 10214408 complement(3657115..3658929) 1 NC_015061.1 KEGG: spe:Spro_1063 preprotein translocase subunit SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecD 3658929 10214408 Rahaq_3382 Rahnella sp. Y9602 protein-export membrane protein SecD YP_004214103.1 3657115 R 741091 CDS YP_004214104.1 322834077 10214409 complement(3658990..3659322) 1 NC_015061.1 KEGG: yen:YE3165 preprotein translocase subunit YajC; TIGRFAM: preprotein translocase YajC subunit; PFAM: YajC family protein; preprotein translocase subunit YajC 3659322 10214409 Rahaq_3383 Rahnella sp. Y9602 preprotein translocase subunit YajC YP_004214104.1 3658990 R 741091 CDS YP_004214105.1 322834078 10214410 complement(3659484..3660608) 1 NC_015061.1 TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; KEGG: eca:ECA1120 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase 3660608 10214410 Rahaq_3384 Rahnella sp. Y9602 queuine tRNA-ribosyltransferase YP_004214105.1 3659484 R 741091 CDS YP_004214106.1 322834079 10214411 complement(3660723..3661793) 1 NC_015061.1 KEGG: ypi:YpsIP31758_3124 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; S-adenosylmethionine/tRNA-ribosyltransferase- isomerase 3661793 10214411 Rahaq_3385 Rahnella sp. Y9602 S-adenosylmethionine/tRNA-ribosyltransferase- isomerase YP_004214106.1 3660723 R 741091 CDS YP_004214107.1 322834080 10214412 3661928..3662509 1 NC_015061.1 KEGG: yen:YE3173 hypothetical protein; PFAM: protein of unknown function DUF479; ACP phosphodiesterase 3662509 10214412 Rahaq_3386 Rahnella sp. Y9602 ACP phosphodiesterase YP_004214107.1 3661928 D 741091 CDS YP_004214108.1 322834081 10214413 3662734..3663336 1 NC_015061.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; KEGG: dda:Dd703_2909 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 3663336 10214413 Rahaq_3387 Rahnella sp. Y9602 alkyl hydroperoxide reductase YP_004214108.1 3662734 D 741091 CDS YP_004214109.1 322834082 10214414 3663594..3665345 1 NC_015061.1 TIGRFAM: gamma-glutamyltransferase; KEGG: spe:Spro_1057 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 3665345 10214414 Rahaq_3388 Rahnella sp. Y9602 gamma-glutamyltransferase YP_004214109.1 3663594 D 741091 CDS YP_004214110.1 322834083 10214415 complement(3665473..3666903) 1 NC_015061.1 PFAM: amino acid permease-associated region; KEGG: spe:Spro_1046 proline-specific permease; amino acid permease 3666903 10214415 Rahaq_3389 Rahnella sp. Y9602 amino acid permease YP_004214110.1 3665473 R 741091 CDS YP_004214111.1 322834084 10214416 complement(3667060..3668379) 1 NC_015061.1 KEGG: spe:Spro_1045 branched-chain amino acid transport system II carrier protein; TIGRFAM: branched-chain amino acid transport system II carrier protein; PFAM: branched-chain amino acid transport system II carrier protein; branched-chain amino acid transport system II carrier protein 3668379 10214416 Rahaq_3390 Rahnella sp. Y9602 branched-chain amino acid transport system II carrier protein YP_004214111.1 3667060 R 741091 CDS YP_004214112.1 322834085 10214417 complement(3668824..3669927) 1 NC_015061.1 PFAM: methionine synthase vitamin-B12 independent; KEGG: eay:EAM_0952 cobalamin-independent methionine biosynthesis protein; vitamin-B12 independent methionine synthase 3669927 10214417 Rahaq_3391 Rahnella sp. Y9602 vitamin-B12 independent methionine synthase YP_004214112.1 3668824 R 741091 CDS YP_004214113.1 322834086 10214418 3670198..3670578 1 NC_015061.1 KEGG: pay:PAU_01640 hypothetical protein; hypothetical protein 3670578 10214418 Rahaq_3392 Rahnella sp. Y9602 hypothetical protein YP_004214113.1 3670198 D 741091 CDS YP_004214114.1 322834087 10214419 3670571..3670903 1 NC_015061.1 KEGG: pay:PAU_01639 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 3670903 10214419 Rahaq_3393 Rahnella sp. Y9602 XRE family transcriptional regulator YP_004214114.1 3670571 D 741091 CDS YP_004214115.1 322834088 10214420 complement(3670937..3672256) 1 NC_015061.1 TIGRFAM: phosphate regulon sensor kinase PhoR; PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: ypy:YPK_3275 phosphate regulon sensor protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 3672256 10214420 Rahaq_3394 Rahnella sp. Y9602 PAS/PAC sensor signal transduction histidine kinase YP_004214115.1 3670937 R 741091 CDS YP_004214116.1 322834089 10214421 complement(3672279..3672968) 1 NC_015061.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; KEGG: spe:Spro_1041 two component transcriptional regulator; SMART: response regulator receiver; winged helix family two component transcriptional regulator PhoB 3672968 10214421 Rahaq_3395 Rahnella sp. Y9602 winged helix family two component transcriptional regulator PhoB YP_004214116.1 3672279 R 741091 CDS YP_004214117.1 322834090 10214422 3673196..3674434 1 NC_015061.1 KEGG: spe:Spro_1040 exonuclease subunit SbcD; TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; nuclease SbcCD subunit D 3674434 10214422 Rahaq_3396 Rahnella sp. Y9602 nuclease SbcCD subunit D YP_004214117.1 3673196 D 741091 CDS YP_004214118.1 322834091 10214423 3674431..3677679 1 NC_015061.1 KEGG: spe:Spro_1039 exonuclease SbcC; TIGRFAM: exonuclease SbcC; PFAM: SMC domain protein; exonuclease SbcC 3677679 10214423 Rahaq_3397 Rahnella sp. Y9602 exonuclease SbcC YP_004214118.1 3674431 D 741091 CDS YP_004214119.1 322834092 10214425 3678612..3679301 1 NC_015061.1 KEGG: azl:AZL_e02010 hypothetical protein; hypothetical protein 3679301 10214425 Rahaq_3399 Rahnella sp. Y9602 hypothetical protein YP_004214119.1 3678612 D 741091 CDS YP_004214120.1 322834093 10214426 complement(3679361..3680281) 1 NC_015061.1 PFAM: ROK family protein; KEGG: yen:YE3185 fructokinase; ROK family protein 3680281 10214426 Rahaq_3400 Rahnella sp. Y9602 ROK family protein YP_004214120.1 3679361 R 741091 CDS YP_004214121.1 322834094 10214427 3680491..3681405 1 NC_015061.1 PFAM: exonuclease RdgC; KEGG: spe:Spro_1027 recombination associated protein; exonuclease RdgC 3681405 10214427 Rahaq_3401 Rahnella sp. Y9602 exonuclease RdgC YP_004214121.1 3680491 D 741091 CDS YP_004214122.1 322834095 10214428 complement(3681464..3681754) 1 NC_015061.1 PFAM: protein of unknown function DUF1255; KEGG: ypb:YPTS_0953 hypothetical protein; hypothetical protein 3681754 10214428 Rahaq_3402 Rahnella sp. Y9602 hypothetical protein YP_004214122.1 3681464 R 741091 CDS YP_004214123.1 322834096 10214429 complement(3681934..3682611) 1 NC_015061.1 PFAM: AroM family protein; KEGG: spe:Spro_1025 hypothetical protein; AroM family protein 3682611 10214429 Rahaq_3403 Rahnella sp. Y9602 AroM family protein YP_004214123.1 3681934 R 741091 CDS YP_004214124.1 322834097 10214430 complement(3682616..3683545) 1 NC_015061.1 PFAM: protein of unknown function DUF1177; KEGG: spe:Spro_1024 hypothetical protein; hypothetical protein 3683545 10214430 Rahaq_3404 Rahnella sp. Y9602 hypothetical protein YP_004214124.1 3682616 R 741091 CDS YP_004214125.1 322834098 10214431 complement(3683681..3685258) 1 NC_015061.1 PFAM: Oligopeptide transporter OPT superfamily protein; KEGG: spe:Spro_1023 oligopeptide transporter OPT superfamily protein; Oligopeptide transporter OPT superfamily protein 3685258 10214431 Rahaq_3405 Rahnella sp. Y9602 Oligopeptide transporter OPT superfamily protein YP_004214125.1 3683681 R 741091 CDS YP_004214126.1 322834099 10214432 complement(3685335..3686117) 1 NC_015061.1 KEGG: spe:Spro_1022 IclR family transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; IclR family transcriptional regulator 3686117 10214432 Rahaq_3406 Rahnella sp. Y9602 IclR family transcriptional regulator YP_004214126.1 3685335 R 741091 CDS YP_004214127.1 322834100 10214433 complement(3686338..3686454) 1 NC_015061.1 KEGG: etr:ETAE_1298 hypothetical protein; hypothetical protein 3686454 10214433 Rahaq_3407 Rahnella sp. Y9602 hypothetical protein YP_004214127.1 3686338 R 741091 CDS YP_004214128.1 322834101 10214434 complement(3686666..3687190) 1 NC_015061.1 KEGG: spe:Spro_1018 shikimate kinase II; PFAM: shikimate kinase; shikimate kinase 3687190 10214434 Rahaq_3408 Rahnella sp. Y9602 shikimate kinase YP_004214128.1 3686666 R 741091 CDS YP_004214129.1 322834102 10214435 complement(3687466..3688044) 1 NC_015061.1 KEGG: spe:Spro_1013 methyltransferase; methyltransferase 3688044 10214435 Rahaq_3409 Rahnella sp. Y9602 methyltransferase YP_004214129.1 3687466 R 741091 CDS YP_004214130.1 322834103 10214436 complement(3688305..3688580) 1 NC_015061.1 PFAM: protein of unknown function DUF1471; KEGG: ebi:EbC_33250 conserved uncharacterized protein; hypothetical protein 3688580 10214436 Rahaq_3410 Rahnella sp. Y9602 hypothetical protein YP_004214130.1 3688305 R 741091 CDS YP_004214131.1 322834104 10214437 3688975..3689895 1 NC_015061.1 PFAM: protein of unknown function DUF808; KEGG: scl:sce1374 hypothetical protein; hypothetical protein 3689895 10214437 Rahaq_3411 Rahnella sp. Y9602 hypothetical protein YP_004214131.1 3688975 D 741091 CDS YP_004214132.1 322834105 10214438 complement(3689952..3690722) 1 NC_015061.1 PFAM: methyltransferase type 11; KEGG: yen:YE3193 hypothetical protein; type 11 methyltransferase 3690722 10214438 Rahaq_3412 Rahnella sp. Y9602 type 11 methyltransferase YP_004214132.1 3689952 R 741091 CDS YP_004214133.1 322834106 10214439 3690861..3691652 1 NC_015061.1 SMART: helix-turn-helix domain protein; KEGG: pwa:Pecwa_3439 transcriptional regulator, XRE family; helix-turn-helix domain-containing protein 3691652 10214439 Rahaq_3413 Rahnella sp. Y9602 helix-turn-helix domain-containing protein YP_004214133.1 3690861 D 741091 CDS YP_004214134.1 322834107 10214440 complement(3691681..3693003) 1 NC_015061.1 PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein; transposase IS4 family protein 3693003 10214440 Rahaq_3414 Rahnella sp. Y9602 transposase IS4 family protein YP_004214134.1 3691681 R 741091 CDS YP_004214135.1 322834108 10214441 3693217..3693765 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hse:Hsero_0157 acetyltransferase; N-acetyltransferase GCN5 3693765 10214441 Rahaq_3415 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004214135.1 3693217 D 741091 CDS YP_004214136.1 322834109 10214442 3693800..3694645 1 NC_015061.1 KEGG: spe:Spro_1432 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; rhodanese domain-containing protein 3694645 10214442 Rahaq_3416 Rahnella sp. Y9602 rhodanese domain-containing protein YP_004214136.1 3693800 D 741091 CDS YP_004214137.1 322834110 10214443 complement(3694692..3695498) 1 NC_015061.1 KEGG: spe:Spro_1449 hypothetical protein; hypothetical protein 3695498 10214443 Rahaq_3417 Rahnella sp. Y9602 hypothetical protein YP_004214137.1 3694692 R 741091 CDS YP_004214138.1 322834111 10214444 complement(3695511..3696518) 1 NC_015061.1 PFAM: fatty acid desaturase; KEGG: spe:Spro_1444 fatty acid desaturase; fatty acid desaturase 3696518 10214444 Rahaq_3418 Rahnella sp. Y9602 fatty acid desaturase YP_004214138.1 3695511 R 741091 CDS YP_004214139.1 322834112 10214445 complement(3696619..3697920) 1 NC_015061.1 KEGG: yen:YE1296 glucose-1-phosphatase/inositol phosphatase; PFAM: histidine acid phosphatase; glucose-1-phosphatase 3697920 10214445 Rahaq_3419 Rahnella sp. Y9602 glucose-1-phosphatase YP_004214139.1 3696619 R 741091 CDS YP_004214140.1 322834113 10214446 complement(3698091..3698711) 1 NC_015061.1 PFAM: Antimicrobial peptide resistance and lipid A acylation PagP; KEGG: ebi:EbC_12320 antimicrobial peptide resistance and lipid A acylation protein; antimicrobial peptide resistance and lipid A acylation PagP 3698711 10214446 Rahaq_3420 Rahnella sp. Y9602 antimicrobial peptide resistance and lipid A acylation PagP YP_004214140.1 3698091 R 741091 CDS YP_004214141.1 322834114 10214447 complement(3698908..3699531) 1 NC_015061.1 PFAM: Antimicrobial peptide resistance and lipid A acylation PagP; KEGG: spe:Spro_0993 palmitoyl transferase; antimicrobial peptide resistance and lipid A acylation PagP 3699531 10214447 Rahaq_3421 Rahnella sp. Y9602 antimicrobial peptide resistance and lipid A acylation PagP YP_004214141.1 3698908 R 741091 CDS YP_004214142.1 322834115 10214448 complement(3699807..3703697) 1 NC_015061.1 TIGRFAM: phosphoribosylformylglycinamidine synthase; KEGG: spe:Spro_3654 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; phosphoribosylformylglycinamidine synthase 3703697 10214448 Rahaq_3422 Rahnella sp. Y9602 phosphoribosylformylglycinamidine synthase YP_004214142.1 3699807 R 741091 CDS YP_004214143.1 322834116 10214449 3703976..3705436 1 NC_015061.1 manually curated; PFAM: lytic transglycosylase catalytic; extracellular solute-binding protein family 3; KEGG: yen:YE1031 transglycosylase; SMART: extracellular solute-binding protein family 3; lytic transglycosylase 3705436 10214449 Rahaq_3423 Rahnella sp. Y9602 lytic transglycosylase YP_004214143.1 3703976 D 741091 CDS YP_004214144.1 322834117 10214450 complement(3705455..3705997) 1 NC_015061.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: spe:Spro_3656 CMP/dCMP deaminase zinc-binding; CMP/dCMP deaminase zinc-binding protein 3705997 10214450 Rahaq_3424 Rahnella sp. Y9602 CMP/dCMP deaminase zinc-binding protein YP_004214144.1 3705455 R 741091 CDS YP_004214145.1 322834118 10214451 complement(3706054..3706692) 1 NC_015061.1 TIGRFAM: HAD superfamily (subfamily IF) hydrolase, YfhB; KEGG: spe:Spro_3659 hypothetical protein; HAD superfamily hydrolase 3706692 10214451 Rahaq_3425 Rahnella sp. Y9602 HAD superfamily hydrolase YP_004214145.1 3706054 R 741091 CDS YP_004214146.1 322834119 10214452 complement(3706697..3708082) 1 NC_015061.1 KEGG: spe:Spro_3660 phosphotransferase system EIIC; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; Protein-N(pi)-phosphohistidine--sugar phosphotransferase 3708082 10214452 Rahaq_3426 Rahnella sp. Y9602 Protein-N(pi)-phosphohistidine--sugar phosphotransferase YP_004214146.1 3706697 R 741091 CDS YP_004214147.1 322834120 10214453 complement(3708099..3709004) 1 NC_015061.1 KEGG: spe:Spro_3661 N-acetylmuramic acid-6-phosphate etherase; TIGRFAM: glucokinase regulatory-like protein; PFAM: sugar isomerase (SIS); RpiR family transcriptional regulator 3709004 10214453 Rahaq_3427 Rahnella sp. Y9602 RpiR family transcriptional regulator YP_004214147.1 3708099 R 741091 CDS YP_004214148.1 322834121 10214454 3709148..3709996 1 NC_015061.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: spe:Spro_3662 DNA-binding transcriptional regulator; RpiR family transcriptional regulator 3709996 10214454 Rahaq_3428 Rahnella sp. Y9602 RpiR family transcriptional regulator YP_004214148.1 3709148 D 741091 CDS YP_004214149.1 322834122 10214455 3710110..3710364 1 NC_015061.1 KEGG: spe:Spro_3664 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 3710364 10214455 Rahaq_3429 Rahnella sp. Y9602 4Fe-4S ferredoxin YP_004214149.1 3710110 D 741091 CDS YP_004214150.1 322834123 10214456 complement(3710399..3710779) 1 NC_015061.1 KEGG: ypb:YPTS_2997 4'-phosphopantetheinyl transferase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; holo-(acyl-carrier-protein) synthase 3710779 10214456 Rahaq_3430 Rahnella sp. Y9602 holo-(acyl-carrier-protein) synthase YP_004214150.1 3710399 R 741091 CDS YP_004214151.1 322834124 10214457 complement(3710779..3711510) 1 NC_015061.1 TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; KEGG: yen:YE1020 pyridoxine 5'-phosphate synthase; PFAM: Pyridoxal phosphate biosynthetic protein PdxJ; pyridoxal phosphate biosynthetic protein PdxJ 3711510 10214457 Rahaq_3431 Rahnella sp. Y9602 pyridoxal phosphate biosynthetic protein PdxJ YP_004214151.1 3710779 R 741091 CDS YP_004214152.1 322834125 10214458 complement(3711614..3712351) 1 NC_015061.1 KEGG: yen:YE1019 DNA repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; DNA repair protein RecO 3712351 10214458 Rahaq_3432 Rahnella sp. Y9602 DNA repair protein RecO YP_004214152.1 3711614 R 741091 CDS YP_004214153.1 322834126 10214459 complement(3712363..3713268) 1 NC_015061.1 KEGG: ddc:Dd586_3105 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; GTP-binding protein Era 3713268 10214459 Rahaq_3433 Rahnella sp. Y9602 GTP-binding protein Era YP_004214153.1 3712363 R 741091 CDS YP_004214154.1 322834127 10214460 complement(3713265..3713945) 1 NC_015061.1 KEGG: spe:Spro_3669 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; manually curated; TIGRFAM: ribonuclease III; SMART: ribonuclease III; double-stranded RNA binding domain protein; ribonuclease III 3713945 10214460 Rahaq_3434 Rahnella sp. Y9602 ribonuclease III YP_004214154.1 3713265 R 741091 CDS YP_004214155.1 322834128 10214461 complement(3714157..3715134) 1 NC_015061.1 KEGG: spe:Spro_3670 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Peptidase S26, conserved region; signal peptidase I 3715134 10214461 Rahaq_3435 Rahnella sp. Y9602 signal peptidase I YP_004214155.1 3714157 R 741091 CDS YP_004214156.1 322834129 10214462 complement(3715163..3717076) 1 NC_015061.1 KEGG: pwa:Pecwa_1202 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; GTP-binding protein LepA 3717076 10214462 Rahaq_3436 Rahnella sp. Y9602 GTP-binding protein LepA YP_004214156.1 3715163 R 741091 CDS YP_004214157.1 322834130 10214463 3717387..3718205 1 NC_015061.1 KEGG: spe:Spro_3672 hypothetical protein; hypothetical protein 3718205 10214463 Rahaq_3437 Rahnella sp. Y9602 hypothetical protein YP_004214157.1 3717387 D 741091 CDS YP_004214158.1 322834131 10214464 complement(3718266..3718742) 1 NC_015061.1 PFAM: Positive regulator of sigma(E) RseC/MucC; KEGG: ypb:YPTS_3005 SoxR reducing system protein RseC; sigma E positive regulator RseC/MucC 3718742 10214464 Rahaq_3438 Rahnella sp. Y9602 sigma E positive regulator RseC/MucC YP_004214158.1 3718266 R 741091 CDS YP_004214159.1 322834132 10214465 complement(3718791..3719741) 1 NC_015061.1 PFAM: MucB/RseB family protein; KEGG: spe:Spro_3674 periplasmic negative regulator of sigmaE; sigma E regulatory protein MucB/RseB 3719741 10214465 Rahaq_3439 Rahnella sp. Y9602 sigma E regulatory protein MucB/RseB YP_004214159.1 3718791 R 741091 CDS YP_004214160.1 322834133 10214466 complement(3719741..3720388) 1 NC_015061.1 PFAM: Anti sigma-E protein RseA family protein; Anti sigma-E protein RseA domain protein; KEGG: spe:Spro_3675 anti-RNA polymerase sigma factor SigE; anti sigma-E protein, RseA 3720388 10214466 Rahaq_3440 Rahnella sp. Y9602 anti sigma-E protein, RseA YP_004214160.1 3719741 R 741091 CDS YP_004214161.1 322834134 10214467 complement(3720419..3720994) 1 NC_015061.1 KEGG: spe:Spro_3676 RNA polymerase sigma factor RpoE; TIGRFAM: RNA polymerase sigma factor RpoE; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 3720994 10214467 Rahaq_3441 Rahnella sp. Y9602 ECF subfamily RNA polymerase sigma-24 subunit YP_004214161.1 3720419 R 741091 CDS YP_004214162.1 322834135 10214468 3721173..3722810 1 NC_015061.1 KEGG: yen:YE1009 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; L-aspartate oxidase 3722810 10214468 Rahaq_3442 Rahnella sp. Y9602 L-aspartate oxidase YP_004214162.1 3721173 D 741091 CDS YP_004214163.1 322834136 10214469 complement(3722874..3723620) 1 NC_015061.1 KEGG: ypb:YPTS_3010 methyltransferase small; manually curated; PFAM: methyltransferase small; methyltransferase small 3723620 10214469 Rahaq_3443 Rahnella sp. Y9602 methyltransferase small YP_004214163.1 3722874 R 741091 CDS YP_004214164.1 322834137 10214470 3723777..3725105 1 NC_015061.1 KEGG: ypy:YPK_1179 ATP-dependent RNA helicase SrmB; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase 3725105 10214470 Rahaq_3444 Rahnella sp. Y9602 DEAD/DEAH box helicase YP_004214164.1 3723777 D 741091 CDS YP_004214165.1 322834138 10214471 complement(3725198..3725581) 1 NC_015061.1 PFAM: formate C-acetyltransferase glycine radical; KEGG: yen:YE1003 autonomous glycyl radical cofactor GrcA; formate C-acetyltransferase glycine radical 3725581 10214471 Rahaq_3445 Rahnella sp. Y9602 formate C-acetyltransferase glycine radical YP_004214165.1 3725198 R 741091 CDS YP_004214166.1 322834139 10214472 3725921..3726601 1 NC_015061.1 KEGG: spe:Spro_3683 uracil-DNA glycosylase; TIGRFAM: uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily; uracil-DNA glycosylase 3726601 10214472 Rahaq_3446 Rahnella sp. Y9602 uracil-DNA glycosylase YP_004214166.1 3725921 D 741091 CDS YP_004214167.1 322834140 10214473 complement(3726662..3727249) 1 NC_015061.1 PFAM: GrpE protein; KEGG: sgl:SG1798 heat shock protein GrpE; heat shock protein GrpE 3727249 10214473 Rahaq_3447 Rahnella sp. Y9602 heat shock protein GrpE YP_004214167.1 3726662 R 741091 CDS YP_004214168.1 322834141 10214474 3727387..3728265 1 NC_015061.1 PFAM: ATP-NAD/AcoX kinase; KEGG: spe:Spro_3685 inorganic polyphosphate/ATP-NAD kinase; ATP-NAD/AcoX kinase 3728265 10214474 Rahaq_3448 Rahnella sp. Y9602 ATP-NAD/AcoX kinase YP_004214168.1 3727387 D 741091 CDS YP_004214169.1 322834142 10214475 3728362..3730023 1 NC_015061.1 KEGG: ypi:YpsIP31758_2889 recombination and repair protein; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; DNA repair protein RecN 3730023 10214475 Rahaq_3449 Rahnella sp. Y9602 DNA repair protein RecN YP_004214169.1 3728362 D 741091 CDS YP_004214170.1 322834143 10214476 3730130..3730480 1 NC_015061.1 PFAM: SmpA/OmlA domain-containing protein; KEGG: ebi:EbC_34280 small protein A; SmpA/OmlA domain-containing protein 3730480 10214476 Rahaq_3450 Rahnella sp. Y9602 SmpA/OmlA domain-containing protein YP_004214170.1 3730130 D 741091 CDS YP_004214171.1 322834144 10214477 complement(3730563..3731885) 1 NC_015061.1 PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein; transposase IS4 family protein 3731885 10214477 Rahaq_3451 Rahnella sp. Y9602 transposase IS4 family protein YP_004214171.1 3730563 R 741091 CDS YP_004214172.1 322834145 10214478 complement(3731983..3732267) 1 NC_015061.1 PFAM: protein of unknown function UPF0125; KEGG: spe:Spro_3688 hypothetical protein; hypothetical protein 3732267 10214478 Rahaq_3452 Rahnella sp. Y9602 hypothetical protein YP_004214172.1 3731983 R 741091 CDS YP_004214173.1 322834146 10214479 complement(3732260..3732694) 1 NC_015061.1 PFAM: cyclase/dehydrase; KEGG: yen:YE0995 hypothetical protein; cyclase/dehydrase 3732694 10214479 Rahaq_3453 Rahnella sp. Y9602 cyclase/dehydrase YP_004214173.1 3732260 R 741091 CDS YP_004214174.1 322834147 10214480 3732851..3733333 1 NC_015061.1 KEGG: epy:EpC_09860 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; SsrA-binding protein 3733333 10214480 Rahaq_3454 Rahnella sp. Y9602 SsrA-binding protein YP_004214174.1 3732851 D 741091 CDS YP_004214175.1 322834148 10214482 complement(3734581..3734928) 1 NC_015061.1 KEGG: esa:ESA_02980 hypothetical protein; hypothetical protein 3734928 10214482 Rahaq_3455 Rahnella sp. Y9602 hypothetical protein YP_004214175.1 3734581 R 741091 CDS YP_004214176.1 322834149 10214483 3735347..3735598 1 NC_015061.1 manually curated; PFAM: regulatory protein ArsR; KEGG: ent:Ent638_2275 ArsR family transcriptional regulator; SMART: regulatory protein ArsR; regulatory protein ArsR 3735598 10214483 Rahaq_3456 Rahnella sp. Y9602 regulatory protein ArsR YP_004214176.1 3735347 D 741091 CDS YP_004214177.1 322834150 10214484 3735595..3736125 1 NC_015061.1 KEGG: ent:Ent638_2274 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; rhodanese domain-containing protein 3736125 10214484 Rahaq_3457 Rahnella sp. Y9602 rhodanese domain-containing protein YP_004214177.1 3735595 D 741091 CDS YP_004214178.1 322834151 10214486 3736946..3739813 1 NC_015061.1 KEGG: cro:ROD_44821 polysaccharide degrading enzyme; PFAM: glycoside hydrolase family 18; Carbohydrate-binding family V/XII; SMART: chitinase II; glycoside hydrolase 3739813 10214486 Rahaq_3459 Rahnella sp. Y9602 glycoside hydrolase YP_004214178.1 3736946 D 741091 CDS YP_004214179.1 322834152 10214487 3740169..3740948 1 NC_015061.1 TIGRFAM: cationic amino acid ABC transporter periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: ebi:EbC_03840 lysine-arginine-ornithine ABC transporter periplasmic ligand binding protein; SMART: extracellular solute-binding protein family 3; cationic amino acid ABC transporter periplasmic binding protein 3740948 10214487 Rahaq_3460 Rahnella sp. Y9602 cationic amino acid ABC transporter periplasmic binding protein YP_004214179.1 3740169 D 741091 CDS YP_004214180.1 322834153 10214488 complement(3741139..3741921) 1 NC_015061.1 KEGG: set:SEN3097 galactitol utilization operon repressor; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator 3741921 10214488 Rahaq_3461 Rahnella sp. Y9602 DeoR family transcriptional regulator YP_004214180.1 3741139 R 741091 CDS YP_004214181.1 322834154 10214489 3742200..3743495 1 NC_015061.1 KEGG: set:SEN3092 sugar kinase; TIGRFAM: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit; PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ; D-tagatose-bisphosphate aldolase non-catalytic subunit 3743495 10214489 Rahaq_3462 Rahnella sp. Y9602 D-tagatose-bisphosphate aldolase non-catalytic subunit YP_004214181.1 3742200 D 741091 CDS YP_004214182.1 322834155 10214490 3743488..3743970 1 NC_015061.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: cro:ROD_47491 component IIA of galactitol-specific phosphotransferase system; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 3743970 10214490 Rahaq_3463 Rahnella sp. Y9602 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_004214182.1 3743488 D 741091 CDS YP_004214183.1 322834156 10214491 3744046..3744330 1 NC_015061.1 KEGG: ctu:Ctu_04370 PTS system galactitol-specific transporter subunit IIB; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; Protein-N(pi)-phosphohistidine--sugar phosphotransferase 3744330 10214491 Rahaq_3464 Rahnella sp. Y9602 Protein-N(pi)-phosphohistidine--sugar phosphotransferase YP_004214183.1 3744046 D 741091 CDS YP_004214184.1 322834157 10214492 3744334..3745701 1 NC_015061.1 KEGG: set:SEN3095 PTS system, galactitol-specific IIC component; TIGRFAM: PTS system, galactitol-specific IIC subunit; PFAM: PTS system Galactitol-specific IIC component; PTS system galactitol-specific transporter subunit IIC 3745701 10214492 Rahaq_3465 Rahnella sp. Y9602 PTS system galactitol-specific transporter subunit IIC YP_004214184.1 3744334 D 741091 CDS YP_004214185.1 322834158 10214493 3745748..3746797 1 NC_015061.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: kpn:KPN_03551 galactitol-1-phosphate dehydrogenase; molecular chaperone GroES 3746797 10214493 Rahaq_3466 Rahnella sp. Y9602 molecular chaperone GroES YP_004214185.1 3745748 D 741091 CDS YP_004214186.1 322834159 10214494 3746802..3747656 1 NC_015061.1 TIGRFAM: class II aldolase, tagatose bisphosphate family; ketose-bisphosphate aldolase; KEGG: spe:Spro_2579 tagatose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; tagatose bisphosphate family class II aldolase 3747656 10214494 Rahaq_3467 Rahnella sp. Y9602 tagatose bisphosphate family class II aldolase YP_004214186.1 3746802 D 741091 CDS YP_004214187.1 322834160 10214495 3747778..3748482 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bav:BAV1624 acetyltransferase; N-acetyltransferase GCN5 3748482 10214495 Rahaq_3468 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004214187.1 3747778 D 741091 CDS YP_004214188.1 322834161 10214496 complement(3748536..3749069) 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ara:Arad_2738 phosphinothricin acetyltransferase (antibiotic resistance) protein; N-acetyltransferase GCN5 3749069 10214496 Rahaq_3469 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004214188.1 3748536 R 741091 CDS YP_004214189.1 322834162 10214497 complement(3749123..3750220) 1 NC_015061.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Ada metal-binding domain-containing protein; helix-turn-helix- domain containing protein AraC type; methylguanine DNA methyltransferase ribonuclease domain protein; methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: pct:PC1_0793 transcriptional regulator, AraC family; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 3750220 10214497 Rahaq_3470 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004214189.1 3749123 R 741091 CDS YP_004214190.1 322834163 10214498 complement(3750317..3750838) 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xca:xccb100_3920 N-acetyltransferase; N-acetyltransferase GCN5 3750838 10214498 Rahaq_3471 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004214190.1 3750317 R 741091 CDS YP_004214191.1 322834164 10214499 3750925..3751479 1 NC_015061.1 KEGG: vap:Vapar_2210 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 3751479 10214499 Rahaq_3472 Rahnella sp. Y9602 helix-turn-helix domain-containing protein YP_004214191.1 3750925 D 741091 CDS YP_004214192.1 322834165 10214500 complement(3751463..3753148) 1 NC_015061.1 PFAM: peptidase M28; KEGG: sti:Sthe_2595 peptidase M28; peptidase M28 3753148 10214500 Rahaq_3473 Rahnella sp. Y9602 peptidase M28 YP_004214192.1 3751463 R 741091 CDS YP_004214193.1 322834166 10214501 complement(3753151..3753945) 1 NC_015061.1 KEGG: ebi:EbC_02780 conserved uncharacterized protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 3753945 10214501 Rahaq_3474 Rahnella sp. Y9602 family 3 extracellular solute-binding protein YP_004214193.1 3753151 R 741091 CDS YP_004214194.1 322834167 10214502 complement(3753988..3755190) 1 NC_015061.1 KEGG: ebi:EbC_02790 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase dimerisation domain protein; peptidase M20; amidohydrolase 3755190 10214502 Rahaq_3475 Rahnella sp. Y9602 amidohydrolase YP_004214194.1 3753988 R 741091 CDS YP_004214195.1 322834168 10214503 3755386..3756255 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebi:EbC_02800 LysR family transcriptional regulator; LysR family transcriptional regulator 3756255 10214503 Rahaq_3476 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004214195.1 3755386 D 741091 CDS YP_004214196.1 322834169 10214504 complement(3756256..3757137) 1 NC_015061.1 KEGG: pct:PC1_2754 phenazine biosynthesis protein PhzF family; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; phenazine biosynthesis protein PhzF family protein 3757137 10214504 Rahaq_3477 Rahnella sp. Y9602 phenazine biosynthesis protein PhzF family protein YP_004214196.1 3756256 R 741091 CDS YP_004214197.1 322834170 10214505 3757293..3758585 1 NC_015061.1 KEGG: spe:Spro_0025 L-lysine 6-monooxygenase (NADPH); L-lysine 6-monooxygenase 3758585 10214505 Rahaq_3478 Rahnella sp. Y9602 L-lysine 6-monooxygenase YP_004214197.1 3757293 D 741091 CDS YP_004214198.1 322834171 10214506 complement(3758647..3759297) 1 NC_015061.1 KEGG: spe:Spro_3900 hemolysin III family channel protein; TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; hemolysin III family channel protein 3759297 10214506 Rahaq_3479 Rahnella sp. Y9602 hemolysin III family channel protein YP_004214198.1 3758647 R 741091 CDS YP_004214199.1 322834172 10214507 3759636..3760244 1 NC_015061.1 KEGG: spe:Spro_3901 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 3760244 10214507 Rahaq_3480 Rahnella sp. Y9602 metal dependent phosphohydrolase YP_004214199.1 3759636 D 741091 CDS YP_004214200.1 322834173 10214508 complement(3760289..3761596) 1 NC_015061.1 PFAM: extracellular solute-binding protein family 1; KEGG: ddd:Dda3937_02271 ABC transporter periplasmic binding protein; extracellular solute-binding protein 3761596 10214508 Rahaq_3481 Rahnella sp. Y9602 extracellular solute-binding protein YP_004214200.1 3760289 R 741091 CDS YP_004214201.1 322834174 10214509 complement(3761589..3762698) 1 NC_015061.1 KEGG: pct:PC1_0630 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter 3762698 10214509 Rahaq_3482 Rahnella sp. Y9602 ABC transporter YP_004214201.1 3761589 R 741091 CDS YP_004214202.1 322834175 10214510 complement(3762695..3763522) 1 NC_015061.1 PFAM: metallophosphoesterase; KEGG: dda:Dd703_3268 metallophosphoesterase; metallophosphoesterase 3763522 10214510 Rahaq_3483 Rahnella sp. Y9602 metallophosphoesterase YP_004214202.1 3762695 R 741091 CDS YP_004214203.1 322834176 10214511 complement(3763534..3764433) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pwa:Pecwa_0842 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3764433 10214511 Rahaq_3484 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004214203.1 3763534 R 741091 CDS YP_004214204.1 322834177 10214512 complement(3764423..3765295) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pct:PC1_0627 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3765295 10214512 Rahaq_3485 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004214204.1 3764423 R 741091 CDS YP_004214205.1 322834178 10214513 complement(3765458..3765859) 1 NC_015061.1 KEGG: enc:ECL_02156 hypothetical protein; hypothetical protein 3765859 10214513 Rahaq_3486 Rahnella sp. Y9602 hypothetical protein YP_004214205.1 3765458 R 741091 CDS YP_004214206.1 322834179 10214514 complement(3766123..3766443) 1 NC_015061.1 KEGG: pct:PC1_0400 hypothetical protein; hypothetical protein 3766443 10214514 Rahaq_3487 Rahnella sp. Y9602 hypothetical protein YP_004214206.1 3766123 R 741091 CDS YP_004214207.1 322834180 10214515 complement(3766939..3767871) 1 NC_015061.1 PFAM: PfkB domain protein; KEGG: pwa:Pecwa_3718 ribokinase; PfkB domain-containing protein 3767871 10214515 Rahaq_3488 Rahnella sp. Y9602 PfkB domain-containing protein YP_004214207.1 3766939 R 741091 CDS YP_004214208.1 322834181 10214516 complement(3767868..3768812) 1 NC_015061.1 PFAM: ROK family protein; KEGG: pam:PANA_2791 AlsK; ROK family protein 3768812 10214516 Rahaq_3489 Rahnella sp. Y9602 ROK family protein YP_004214208.1 3767868 R 741091 CDS YP_004214209.1 322834182 10214517 complement(3768828..3769508) 1 NC_015061.1 KEGG: pwa:Pecwa_3720 allulose-6-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; Ribulose-phosphate 3-epimerase 3769508 10214517 Rahaq_3490 Rahnella sp. Y9602 Ribulose-phosphate 3-epimerase YP_004214209.1 3768828 R 741091 CDS YP_004214210.1 322834183 10214518 complement(3769547..3770632) 1 NC_015061.1 PFAM: inner-membrane translocator; KEGG: pwa:Pecwa_3721 inner-membrane translocator; inner-membrane translocator 3770632 10214518 Rahaq_3491 Rahnella sp. Y9602 inner-membrane translocator YP_004214210.1 3769547 R 741091 CDS YP_004214211.1 322834184 10214519 complement(3770644..3771633) 1 NC_015061.1 PFAM: inner-membrane translocator; KEGG: pwa:Pecwa_3722 inner-membrane translocator; inner-membrane translocator 3771633 10214519 Rahaq_3492 Rahnella sp. Y9602 inner-membrane translocator YP_004214211.1 3770644 R 741091 CDS YP_004214212.1 322834185 10214520 complement(3771626..3773158) 1 NC_015061.1 KEGG: pwa:Pecwa_3723 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3773158 10214520 Rahaq_3493 Rahnella sp. Y9602 ABC transporter YP_004214212.1 3771626 R 741091 CDS YP_004214213.1 322834186 10214521 complement(3773161..3774147) 1 NC_015061.1 KEGG: pwa:Pecwa_3724 carbohydrate ABC transporter periplasmic-binding protein; carbohydrate ABC transporter periplasmic-binding protein 3774147 10214521 Rahaq_3494 Rahnella sp. Y9602 carbohydrate ABC transporter periplasmic-binding protein YP_004214213.1 3773161 R 741091 CDS YP_004214214.1 322834187 10214522 complement(3774166..3775023) 1 NC_015061.1 KEGG: pam:PANA_2786 YulB; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator 3775023 10214522 Rahaq_3495 Rahnella sp. Y9602 DeoR family transcriptional regulator YP_004214214.1 3774166 R 741091 CDS YP_004214215.1 322834188 10214523 complement(3775355..3776098) 1 NC_015061.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: spe:Spro_3909 hypothetical protein; short-chain dehydrogenase/reductase SDR 3776098 10214523 Rahaq_3496 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004214215.1 3775355 R 741091 CDS YP_004214216.1 322834189 10214524 complement(3776350..3779223) 1 NC_015061.1 KEGG: spe:Spro_3914 glycine dehydrogenase; TIGRFAM: glycine dehydrogenase; PFAM: Glycine cleavage system P-protein-like; glycine dehydrogenase 3779223 10214524 Rahaq_3497 Rahnella sp. Y9602 glycine dehydrogenase YP_004214216.1 3776350 R 741091 CDS YP_004214217.1 322834190 10214525 complement(3779333..3779719) 1 NC_015061.1 KEGG: spe:Spro_3915 glycine cleavage system H protein; TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; glycine cleavage system H protein 3779719 10214525 Rahaq_3498 Rahnella sp. Y9602 glycine cleavage system H protein YP_004214217.1 3779333 R 741091 CDS YP_004214218.1 322834191 10214526 complement(3779783..3780880) 1 NC_015061.1 KEGG: spe:Spro_3916 glycine cleavage system aminomethyltransferase T; TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; glycine cleavage system T protein 3780880 10214526 Rahaq_3499 Rahnella sp. Y9602 glycine cleavage system T protein YP_004214218.1 3779783 R 741091 CDS YP_004214219.1 322834192 10214527 complement(3781333..3782559) 1 NC_015061.1 KEGG: spe:Spro_3917 hypothetical protein; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase 3782559 10214527 Rahaq_3500 Rahnella sp. Y9602 UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase YP_004214219.1 3781333 R 741091 CDS YP_004214220.1 322834193 10214528 complement(3782577..3783755) 1 NC_015061.1 manually curated; TIGRFAM: 2-polyprenyl-6-methoxyphenol 4-hydroxylase; Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; KEGG: ypi:YpsIP31758_0861 2-octaprenyl-6-methoxyphenyl hydroxylase; PFAM: FAD dependent oxidoreductase; 2-polyprenyl-6-methoxyphenol 4-hydroxylase 3783755 10214528 Rahaq_3501 Rahnella sp. Y9602 2-polyprenyl-6-methoxyphenol 4-hydroxylase YP_004214220.1 3782577 R 741091 CDS YP_004214221.1 322834194 10214529 complement(3783757..3785073) 1 NC_015061.1 PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: ypb:YPTS_3317 proline aminopeptidase P II; peptidase M24 3785073 10214529 Rahaq_3502 Rahnella sp. Y9602 peptidase M24 YP_004214221.1 3783757 R 741091 CDS YP_004214222.1 322834195 10214530 complement(3785132..3785710) 1 NC_015061.1 KEGG: spe:Spro_3920 hypothetical protein; TIGRFAM: yecA family protein; PFAM: Uncharacterised protein family UPF0149 (YgfB); hypothetical protein 3785710 10214530 Rahaq_3503 Rahnella sp. Y9602 hypothetical protein YP_004214222.1 3785132 R 741091 CDS YP_004214223.1 322834196 10214531 3785958..3786287 1 NC_015061.1 PFAM: protein of unknown function DUF710; KEGG: yen:YE3398 Z-ring-associated protein; hypothetical protein 3786287 10214531 Rahaq_3504 Rahnella sp. Y9602 hypothetical protein YP_004214223.1 3785958 D 741091 CDS YP_004214224.1 322834197 10214533 3786528..3787154 1 NC_015061.1 manually curated; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: spe:Spro_3922 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 3787154 10214533 Rahaq_3505 Rahnella sp. Y9602 5-formyltetrahydrofolate cyclo-ligase YP_004214224.1 3786528 D 741091 CDS YP_004214225.1 322834198 10214534 3787426..3787836 1 NC_015061.1 KEGG: ebi:EbC_19960 hypothetical protein; hypothetical protein 3787836 10214534 Rahaq_3506 Rahnella sp. Y9602 hypothetical protein YP_004214225.1 3787426 D 741091 CDS YP_004214226.1 322834199 10214535 complement(3788148..3789386) 1 NC_015061.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; KEGG: epy:EpC_29500 D-3-phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 3789386 10214535 Rahaq_3507 Rahnella sp. Y9602 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_004214226.1 3788148 R 741091 CDS YP_004214227.1 322834200 10214536 complement(3789737..3790399) 1 NC_015061.1 TIGRFAM: ribose 5-phosphate isomerase; KEGG: spe:Spro_3924 ribose-5-phosphate isomerase A; PFAM: Ribose 5-phosphate isomerase; ribose 5-phosphate isomerase 3790399 10214536 Rahaq_3508 Rahnella sp. Y9602 ribose 5-phosphate isomerase YP_004214227.1 3789737 R 741091 CDS YP_004214228.1 322834201 10214537 3790627..3791529 1 NC_015061.1 KEGG: spe:Spro_3925 chromosome replication initiation inhibitor protein; TIGRFAM: transcriptional regulator, ArgP family; PFAM: regulatory protein LysR; LysR substrate-binding; LysR family transcriptional regulator 3791529 10214537 Rahaq_3509 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004214228.1 3790627 D 741091 CDS YP_004214229.1 322834202 10214538 complement(3791558..3792451) 1 NC_015061.1 KEGG: bgf:BC1003_4236 LysR family transcriptional regulator; manually curated; PFAM: LysR substrate-binding; regulatory protein LysR; LysR family transcriptional regulator 3792451 10214538 Rahaq_3510 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004214229.1 3791558 R 741091 CDS YP_004214230.1 322834203 10214539 3792573..3793415 1 NC_015061.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_4237 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3793415 10214539 Rahaq_3511 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004214230.1 3792573 D 741091 CDS YP_004214231.1 322834204 10214540 complement(3793473..3794219) 1 NC_015061.1 PFAM: protein of unknown function DUF541; KEGG: spe:Spro_3926 hypothetical protein; hypothetical protein 3794219 10214540 Rahaq_3512 Rahnella sp. Y9602 hypothetical protein YP_004214231.1 3793473 R 741091 CDS YP_004214232.1 322834205 10214541 complement(3794323..3794940) 1 NC_015061.1 KEGG: spe:Spro_3927 arginine exporter protein; TIGRFAM: L-lysine exporter; PFAM: lysine exporter protein (LYSE/YGGA); L-lysine exporter 3794940 10214541 Rahaq_3513 Rahnella sp. Y9602 L-lysine exporter YP_004214232.1 3794323 R 741091 CDS YP_004214233.1 322834206 10214542 complement(3795122..3796009) 1 NC_015061.1 PFAM: MscS Mechanosensitive ion channel; Conserved TM helix repeat-containing protein; KEGG: ypb:YPTS_3326 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 3796009 10214542 Rahaq_3514 Rahnella sp. Y9602 mechanosensitive ion channel protein MscS YP_004214233.1 3795122 R 741091 CDS YP_004214234.1 322834207 10214543 complement(3796146..3797414) 1 NC_015061.1 TIGRFAM: oligosaccharide/H+ symporter, major facilitator superfamily (MFS); KEGG: eca:ECA1489 galactoside permease; oligosaccharide/H+ symporter, major facilitator superfamily (MFS) 3797414 10214543 Rahaq_3515 Rahnella sp. Y9602 oligosaccharide/H+ symporter, major facilitator superfamily (MFS) YP_004214234.1 3796146 R 741091 CDS YP_004214235.1 322834208 10214544 complement(3797475..3800573) 1 NC_015061.1 PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 42 domain 5 loop region; KEGG: spe:Spro_3173 beta-D-galactosidase; glycoside hydrolase 3800573 10214544 Rahaq_3516 Rahnella sp. Y9602 glycoside hydrolase YP_004214235.1 3797475 R 741091 CDS YP_004214236.1 322834209 10214545 complement(3800708..3801790) 1 NC_015061.1 KEGG: dze:Dd1591_2732 lac repressor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator 3801790 10214545 Rahaq_3517 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004214236.1 3800708 R 741091 CDS YP_004214237.1 322834210 10214546 complement(3801927..3803006) 1 NC_015061.1 KEGG: yen:YE3413 fructose-bisphosphate aldolase; TIGRFAM: fructose-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; fructose-bisphosphate aldolase 3803006 10214546 Rahaq_3518 Rahnella sp. Y9602 fructose-bisphosphate aldolase YP_004214237.1 3801927 R 741091 CDS YP_004214238.1 322834211 10214547 complement(3803136..3804299) 1 NC_015061.1 KEGG: dda:Dd703_0554 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; phosphoglycerate kinase 3804299 10214547 Rahaq_3519 Rahnella sp. Y9602 phosphoglycerate kinase YP_004214238.1 3803136 R 741091 CDS YP_004214239.1 322834212 10214548 complement(3804372..3805388) 1 NC_015061.1 TIGRFAM: D-erythrose-4-phosphate dehydrogenase; KEGG: yen:YE3415 erythrose 4-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; D-erythrose-4-phosphate dehydrogenase 3805388 10214548 Rahaq_3520 Rahnella sp. Y9602 D-erythrose-4-phosphate dehydrogenase YP_004214239.1 3804372 R 741091 CDS YP_004214240.1 322834213 10214549 complement(3805889..3807883) 1 NC_015061.1 KEGG: spe:Spro_3954 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain-containing protein; Transketolase central region; transketolase 3807883 10214549 Rahaq_3521 Rahnella sp. Y9602 transketolase YP_004214240.1 3805889 R 741091 CDS YP_004214241.1 322834214 10214550 3808132..3808884 1 NC_015061.1 PFAM: peptidase M48 Ste24p; KEGG: spe:Spro_3955 peptidase M48 Ste24p; peptidase M48 Ste24p 3808884 10214550 Rahaq_3522 Rahnella sp. Y9602 peptidase M48 Ste24p YP_004214241.1 3808132 D 741091 CDS YP_004214242.1 322834215 10214551 3809439..3810026 1 NC_015061.1 PFAM: Fimbrial protein domain-containing protein; KEGG: enc:ECL_00942 hypothetical protein; fimbrial protein domain-containing protein 3810026 10214551 Rahaq_3523 Rahnella sp. Y9602 fimbrial protein domain-containing protein YP_004214242.1 3809439 D 741091 CDS YP_004214243.1 322834216 10214552 3810107..3810841 1 NC_015061.1 PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: enc:ECL_00941 chaperone protein EcpD; Pili assembly chaperone, N-terminal protein 3810841 10214552 Rahaq_3524 Rahnella sp. Y9602 Pili assembly chaperone, N-terminal protein YP_004214243.1 3810107 D 741091 CDS YP_004214244.1 322834217 10214553 3810882..3813518 1 NC_015061.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: enc:ECL_00940 fimbrial usher protein; fimbrial biogenesis outer membrane usher protein 3813518 10214553 Rahaq_3525 Rahnella sp. Y9602 fimbrial biogenesis outer membrane usher protein YP_004214244.1 3810882 D 741091 CDS YP_004214245.1 322834218 10214554 3813553..3814131 1 NC_015061.1 PFAM: Fimbrial protein domain-containing protein; KEGG: enc:ECL_00939 fimbrial protein; fimbrial protein domain-containing protein 3814131 10214554 Rahaq_3526 Rahnella sp. Y9602 fimbrial protein domain-containing protein YP_004214245.1 3813553 D 741091 CDS YP_004214246.1 322834219 10214555 3814177..3814746 1 NC_015061.1 PFAM: Fimbrial protein domain-containing protein; KEGG: enc:ECL_00938 fimbrial protein; fimbrial protein domain-containing protein 3814746 10214555 Rahaq_3527 Rahnella sp. Y9602 fimbrial protein domain-containing protein YP_004214246.1 3814177 D 741091 CDS YP_004214247.1 322834220 10214556 3814776..3815378 1 NC_015061.1 PFAM: Fimbrial protein domain-containing protein; KEGG: seh:SeHA_C0206 fimbrial protein; fimbrial protein domain-containing protein 3815378 10214556 Rahaq_3528 Rahnella sp. Y9602 fimbrial protein domain-containing protein YP_004214247.1 3814776 D 741091 CDS YP_004214248.1 322834221 10214557 3815371..3816495 1 NC_015061.1 PFAM: Fimbrial protein domain-containing protein; KEGG: enc:ECL_00936 hypothetical protein; fimbrial protein domain-containing protein 3816495 10214557 Rahaq_3529 Rahnella sp. Y9602 fimbrial protein domain-containing protein YP_004214248.1 3815371 D 741091 CDS YP_004214249.1 322834222 10214558 complement(3816567..3818549) 1 NC_015061.1 KEGG: spe:Spro_3973 arginine decarboxylase; TIGRFAM: arginine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; arginine decarboxylase 3818549 10214558 Rahaq_3530 Rahnella sp. Y9602 arginine decarboxylase YP_004214249.1 3816567 R 741091 CDS YP_004214250.1 322834223 10214559 3819430..3820581 1 NC_015061.1 TIGRFAM: S-adenosylmethionine synthetase; KEGG: ebi:EbC_36630 S-adenosylmethionine synthetase (methionine adenosyltransferase); PFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthetase 3820581 10214559 Rahaq_3531 Rahnella sp. Y9602 S-adenosylmethionine synthetase YP_004214250.1 3819430 D 741091 CDS YP_004214251.1 322834224 10214560 3821098..3821841 1 NC_015061.1 KEGG: ebi:EbC_44770 fimbrial protein; hypothetical protein 3821841 10214560 Rahaq_3532 Rahnella sp. Y9602 hypothetical protein YP_004214251.1 3821098 D 741091 CDS YP_004214252.1 322834225 10214561 3821922..3822425 1 NC_015061.1 KEGG: ebi:EbC_44780 CS1 type fimbrial major subunit; CS1 type fimbrial major subunit 3822425 10214561 Rahaq_3533 Rahnella sp. Y9602 CS1 type fimbrial major subunit YP_004214252.1 3821922 D 741091 CDS YP_004214253.1 322834226 10214562 3822514..3825207 1 NC_015061.1 KEGG: ebi:EbC_44790 outer membrane fimbrial usher protein; outer membrane fimbrial usher protein 3825207 10214562 Rahaq_3534 Rahnella sp. Y9602 outer membrane fimbrial usher protein YP_004214253.1 3822514 D 741091 CDS YP_004214254.1 322834227 10214563 3825204..3826328 1 NC_015061.1 PFAM: CblD family pilus biogenesis initiator protein; KEGG: spe:Spro_0214 CblD family pilus biogenesis initiator protein; CblD family pilus biogenesis initiator protein 3826328 10214563 Rahaq_3535 Rahnella sp. Y9602 CblD family pilus biogenesis initiator protein YP_004214254.1 3825204 D 741091 CDS YP_004214255.1 322834228 10214564 3826341..3827495 1 NC_015061.1 PFAM: CblD family pilus biogenesis initiator protein; KEGG: spe:Spro_0214 CblD family pilus biogenesis initiator protein; CblD family pilus biogenesis initiator protein 3827495 10214564 Rahaq_3536 Rahnella sp. Y9602 CblD family pilus biogenesis initiator protein YP_004214255.1 3826341 D 741091 CDS YP_004214256.1 322834229 10214565 3827517..3828260 1 NC_015061.1 KEGG: eck:EC55989_3511 fimbrial protein; fimbrial protein 3828260 10214565 Rahaq_3537 Rahnella sp. Y9602 fimbrial protein YP_004214256.1 3827517 D 741091 CDS YP_004214257.1 322834230 10214566 3828569..3829963 1 NC_015061.1 TIGRFAM: sugar transporter; KEGG: spe:Spro_1160 sugar transporter; sugar transporter 3829963 10214566 Rahaq_3538 Rahnella sp. Y9602 sugar transporter YP_004214257.1 3828569 D 741091 CDS YP_004214258.1 322834231 10214567 3830018..3830575 1 NC_015061.1 SMART: protein of unknown function SprT; KEGG: yen:YE3424 hypothetical protein; hypothetical protein 3830575 10214567 Rahaq_3539 Rahnella sp. Y9602 hypothetical protein YP_004214258.1 3830018 D 741091 CDS YP_004214259.1 322834232 10214568 3830669..3831382 1 NC_015061.1 KEGG: ecm:EcSMS35_3087 endonuclease I; PFAM: Endonuclease I; Deoxyribonuclease I 3831382 10214568 Rahaq_3540 Rahnella sp. Y9602 Deoxyribonuclease I YP_004214259.1 3830669 D 741091 CDS YP_004214260.1 322834233 10214569 3831470..3832201 1 NC_015061.1 PFAM: protein of unknown function DUF558; KEGG: spe:Spro_4025 hypothetical protein; hypothetical protein 3832201 10214569 Rahaq_3541 Rahnella sp. Y9602 hypothetical protein YP_004214260.1 3831470 D 741091 CDS YP_004214261.1 322834234 10214570 3832213..3833163 1 NC_015061.1 TIGRFAM: glutathione synthetase; KEGG: ddd:Dda3937_00424 glutathione synthetase; PFAM: glutathione synthetase ATP-binding; glutathione synthetase domain protein; glutathione synthetase 3833163 10214570 Rahaq_3542 Rahnella sp. Y9602 glutathione synthetase YP_004214261.1 3832213 D 741091 CDS YP_004214262.1 322834235 10214571 3833292..3833855 1 NC_015061.1 PFAM: protein of unknown function DUF179; KEGG: spe:Spro_4027 hypothetical protein; hypothetical protein 3833855 10214571 Rahaq_3543 Rahnella sp. Y9602 hypothetical protein YP_004214262.1 3833292 D 741091 CDS YP_004214263.1 322834236 10214572 3833855..3834283 1 NC_015061.1 KEGG: pwa:Pecwa_3911 Holliday junction resolvase-like protein; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; Holliday junction resolvase YqgF 3834283 10214572 Rahaq_3544 Rahnella sp. Y9602 Holliday junction resolvase YqgF YP_004214263.1 3833855 D 741091 CDS YP_004214264.1 322834237 10214573 complement(3834274..3835296) 1 NC_015061.1 KEGG: spe:Spro_4029 twitching motility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; twitching motility protein 3835296 10214573 Rahaq_3545 Rahnella sp. Y9602 twitching motility protein YP_004214264.1 3834274 R 741091 CDS YP_004214265.1 322834238 10214574 3835319..3836038 1 NC_015061.1 PFAM: alanine racemase domain protein; KEGG: spe:Spro_4030 alanine racemase domain-containing protein; alanine racemase 3836038 10214574 Rahaq_3546 Rahnella sp. Y9602 alanine racemase YP_004214265.1 3835319 D 741091 CDS YP_004214266.1 322834239 10214575 3836111..3836932 1 NC_015061.1 TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: spe:Spro_4031 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; pyrroline-5-carboxylate reductase 3836932 10214575 Rahaq_3547 Rahnella sp. Y9602 pyrroline-5-carboxylate reductase YP_004214266.1 3836111 D 741091 CDS YP_004214267.1 322834240 10214576 3837019..3837573 1 NC_015061.1 PFAM: protein of unknown function YGGT; KEGG: yen:YE3435 hypothetical protein; hypothetical protein 3837573 10214576 Rahaq_3548 Rahnella sp. Y9602 hypothetical protein YP_004214267.1 3837019 D 741091 CDS YP_004214268.1 322834241 10214577 3837558..3837863 1 NC_015061.1 PFAM: protein of unknown function DUF167; KEGG: cro:ROD_50331 hypothetical protein; hypothetical protein 3837863 10214577 Rahaq_3549 Rahnella sp. Y9602 hypothetical protein YP_004214268.1 3837558 D 741091 CDS YP_004214269.1 322834242 10214578 3837885..3838493 1 NC_015061.1 KEGG: spe:Spro_4034 deoxyribonucleotide triphosphate pyrophosphatase; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 3838493 10214578 Rahaq_3550 Rahnella sp. Y9602 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase YP_004214269.1 3837885 D 741091 CDS YP_004214270.1 322834243 10214579 3838486..3839622 1 NC_015061.1 TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; KEGG: ebi:EbC_36750 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 3839622 10214579 Rahaq_3551 Rahnella sp. Y9602 oxygen-independent coproporphyrinogen III oxidase YP_004214270.1 3838486 D 741091 CDS YP_004214271.1 322834244 10214580 complement(3839704..3840438) 1 NC_015061.1 KEGG: ebi:EbC_36760 conserved uncharacterized protein; hypothetical protein 3840438 10214580 Rahaq_3552 Rahnella sp. Y9602 hypothetical protein YP_004214271.1 3839704 R 741091 CDS YP_004214272.1 322834245 10214581 complement(3840463..3841389) 1 NC_015061.1 TIGRFAM: Glutaminase, core; KEGG: etr:ETAE_0268 glutaminase; PFAM: Glutaminase, core; glutaminase 3841389 10214581 Rahaq_3553 Rahnella sp. Y9602 glutaminase YP_004214272.1 3840463 R 741091 CDS YP_004214273.1 322834246 10214582 complement(3841582..3841908) 1 NC_015061.1 PFAM: protein of unknown function DUF469; KEGG: enc:ECL_04286 hypothetical protein; hypothetical protein 3841908 10214582 Rahaq_3554 Rahnella sp. Y9602 hypothetical protein YP_004214273.1 3841582 R 741091 CDS YP_004214274.1 322834247 10214583 complement(3841908..3842627) 1 NC_015061.1 KEGG: spe:Spro_4042 tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 3842627 10214583 Rahaq_3555 Rahnella sp. Y9602 tRNA (guanine-N(7)-)-methyltransferase YP_004214274.1 3841908 R 741091 CDS YP_004214275.1 322834248 10214584 3842851..3843927 1 NC_015061.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; KEGG: spe:Spro_4043 adenine DNA glycosylase; SMART: HhH-GPD family protein; iron-sulfur cluster loop; A/G-specific adenine glycosylase 3843927 10214584 Rahaq_3556 Rahnella sp. Y9602 A/G-specific adenine glycosylase YP_004214275.1 3842851 D 741091 CDS YP_004214276.1 322834249 10214585 3843961..3844233 1 NC_015061.1 PFAM: Fe(II) trafficking protein YggX; KEGG: ypb:YPTS_3359 hypothetical protein; Fe(II) trafficking protein YggX 3844233 10214585 Rahaq_3557 Rahnella sp. Y9602 Fe(II) trafficking protein YggX YP_004214276.1 3843961 D 741091 CDS YP_004214277.1 322834250 10214586 3844310..3845389 1 NC_015061.1 PFAM: lytic transglycosylase catalytic; KEGG: spe:Spro_4045 murein transglycosylase C; lytic transglycosylase 3845389 10214586 Rahaq_3558 Rahnella sp. Y9602 lytic transglycosylase YP_004214277.1 3844310 D 741091 CDS YP_004214278.1 322834251 10214587 complement(3845438..3846571) 1 NC_015061.1 PFAM: glycosyl transferase group 1; KEGG: pmr:PMI3190 glycosyl transferase; group 1 glycosyl transferase 3846571 10214587 Rahaq_3559 Rahnella sp. Y9602 group 1 glycosyl transferase YP_004214278.1 3845438 R 741091 CDS YP_004214279.1 322834252 10214588 complement(3846613..3847617) 1 NC_015061.1 KEGG: fba:FIC_01937 hypothetical protein; hypothetical protein 3847617 10214588 Rahaq_3560 Rahnella sp. Y9602 hypothetical protein YP_004214279.1 3846613 R 741091 CDS YP_004214280.1 322834253 10214589 complement(3847619..3848803) 1 NC_015061.1 PFAM: glycosyl transferase group 1; KEGG: gwc:GWCH70_3261 glycosyl transferase group 1; group 1 glycosyl transferase 3848803 10214589 Rahaq_3561 Rahnella sp. Y9602 group 1 glycosyl transferase YP_004214280.1 3847619 R 741091 CDS YP_004214281.1 322834254 10214590 complement(3848800..3849381) 1 NC_015061.1 KEGG: mcl:MCCL_0673 hypothetical protein; hypothetical protein 3849381 10214590 Rahaq_3562 Rahnella sp. Y9602 hypothetical protein YP_004214281.1 3848800 R 741091 CDS YP_004214282.1 322834255 10214591 complement(3849374..3850459) 1 NC_015061.1 PFAM: glycosyl transferase group 1; KEGG: spn:SP_0353 capsular polysaccharide biosynthesis protein Cps4H; group 1 glycosyl transferase 3850459 10214591 Rahaq_3563 Rahnella sp. Y9602 group 1 glycosyl transferase YP_004214282.1 3849374 R 741091 CDS YP_004214283.1 322834256 10214592 complement(3850446..3851669) 1 NC_015061.1 KEGG: pjd:Pjdr2_0357 hypothetical protein; hypothetical protein 3851669 10214592 Rahaq_3564 Rahnella sp. Y9602 hypothetical protein YP_004214283.1 3850446 R 741091 CDS YP_004214284.1 322834257 10214593 complement(3851677..3852894) 1 NC_015061.1 PFAM: polysaccharide biosynthesis protein; KEGG: enc:ECL_03359 lipopolysaccharide biosynthesis protein; polysaccharide biosynthesis protein 3852894 10214593 Rahaq_3565 Rahnella sp. Y9602 polysaccharide biosynthesis protein YP_004214284.1 3851677 R 741091 CDS YP_004214285.1 322834258 10214594 complement(3852998..3855148) 1 NC_015061.1 TIGRFAM: capsular exopolysaccharide family; KEGG: ctu:Ctu_27570 tyrosine kinase; PFAM: lipopolysaccharide biosynthesis protein; capsular exopolysaccharide family protein 3855148 10214594 Rahaq_3566 Rahnella sp. Y9602 capsular exopolysaccharide family protein YP_004214285.1 3852998 R 741091 CDS YP_004214286.1 322834259 10214595 complement(3855145..3855594) 1 NC_015061.1 manually curated; PFAM: Protein-tyrosine phosphatase, low molecular weight; KEGG: spe:Spro_1584 protein tyrosine phosphatase; SMART: Protein-tyrosine phosphatase, low molecular weight; protein tyrosine phosphatase 3855594 10214595 Rahaq_3567 Rahnella sp. Y9602 protein tyrosine phosphatase YP_004214286.1 3855145 R 741091 CDS YP_004214287.1 322834260 10214596 complement(3855601..3856731) 1 NC_015061.1 KEGG: kva:Kvar_1551 polysaccharide export protein; manually curated; PFAM: polysaccharide export protein; Soluble ligand binding domain; polysaccharide export protein 3856731 10214596 Rahaq_3568 Rahnella sp. Y9602 polysaccharide export protein YP_004214287.1 3855601 R 741091 CDS YP_004214288.1 322834261 10214597 complement(3857042..3858115) 1 NC_015061.1 KEGG: etr:ETAE_0101 UDP-N-acetylmuramyl pentapeptide phosphotransferase; TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; PFAM: Glycosyl transferase, family 4, conserved region; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 3858115 10214597 Rahaq_3569 Rahnella sp. Y9602 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase YP_004214288.1 3857042 R 741091 CDS YP_004214289.1 322834262 10214598 complement(3858477..3860639) 1 NC_015061.1 KEGG: spe:Spro_4047 ornithine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; Ornithine decarboxylase 3860639 10214598 Rahaq_3570 Rahnella sp. Y9602 Ornithine decarboxylase YP_004214289.1 3858477 R 741091 CDS YP_004214290.1 322834263 10214600 complement(3861708..3863024) 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: ddd:Dda3937_00340 D-galactonate transporter; major facilitator superfamily protein 3863024 10214600 Rahaq_3571 Rahnella sp. Y9602 major facilitator superfamily protein YP_004214290.1 3861708 R 741091 CDS YP_004214291.1 322834264 10214601 complement(3863037..3863690) 1 NC_015061.1 PFAM: Conserved hypothetical protein CHP00022; KEGG: pwa:Pecwa_4126 hypothetical protein; hypothetical protein 3863690 10214601 Rahaq_3572 Rahnella sp. Y9602 hypothetical protein YP_004214291.1 3863037 R 741091 CDS YP_004214292.1 322834265 10214602 complement(3863707..3864636) 1 NC_015061.1 PFAM: dihydrodipicolinate synthetase; KEGG: dda:Dd703_0301 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 3864636 10214602 Rahaq_3573 Rahnella sp. Y9602 dihydrodipicolinate synthetase YP_004214292.1 3863707 R 741091 CDS YP_004214293.1 322834266 10214603 complement(3864731..3865945) 1 NC_015061.1 TIGRFAM: ribokinase; PFAM: PfkB domain protein; regulatory protein DeoR; KEGG: ddd:Dda3937_00343 ribokinase; SMART: regulatory protein DeoR; ribokinase 3865945 10214603 Rahaq_3574 Rahnella sp. Y9602 ribokinase YP_004214293.1 3864731 R 741091 CDS YP_004214294.1 322834267 10214604 3866231..3866992 1 NC_015061.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: cro:ROD_07901 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 3866992 10214604 Rahaq_3575 Rahnella sp. Y9602 endonuclease/exonuclease/phosphatase YP_004214294.1 3866231 D 741091 CDS YP_004214295.1 322834268 10214605 3866989..3868236 1 NC_015061.1 KEGG: cko:CKO_02338 cardiolipin synthase 2; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; phospholipase D/Transphosphatidylase 3868236 10214605 Rahaq_3576 Rahnella sp. Y9602 phospholipase D/Transphosphatidylase YP_004214295.1 3866989 D 741091 CDS YP_004214296.1 322834269 10214606 3868236..3869198 1 NC_015061.1 KEGG: sea:SeAg_B0846 inner membrane protein YbhN; inner membrane protein YbhN 3869198 10214606 Rahaq_3577 Rahnella sp. Y9602 inner membrane protein YbhN YP_004214296.1 3868236 D 741091 CDS YP_004214297.1 322834270 10214607 complement(3869210..3870514) 1 NC_015061.1 KEGG: spe:Spro_1916 Mn2+/Fe2+ transporter; TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; NRAMP family Mn2+/Fe2+ transporter 3870514 10214607 Rahaq_3578 Rahnella sp. Y9602 NRAMP family Mn2+/Fe2+ transporter YP_004214297.1 3869210 R 741091 CDS YP_004214298.1 322834271 10214608 3871057..3872664 1 NC_015061.1 KEGG: bpr:GBP346_A2028 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3872664 10214608 Rahaq_3579 Rahnella sp. Y9602 methyl-accepting chemotaxis sensory transducer YP_004214298.1 3871057 D 741091 CDS YP_004214299.1 322834272 10214609 3872674..3873687 1 NC_015061.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: vap:Vapar_3354 periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator 3873687 10214609 Rahaq_3580 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004214299.1 3872674 D 741091 CDS YP_004214300.1 322834273 10214611 3875406..3877370 1 NC_015061.1 PFAM: acyltransferase 3; KEGG: ebi:EbC_09730 acyltransferase family protein; acyltransferase 3877370 10214611 Rahaq_3582 Rahnella sp. Y9602 acyltransferase YP_004214300.1 3875406 D 741091 CDS YP_004214301.1 322834274 10214612 complement(3877782..3879005) 1 NC_015061.1 KEGG: nam:NAMH_1656 O-antigen polymerase family; hypothetical protein 3879005 10214612 Rahaq_3583 Rahnella sp. Y9602 hypothetical protein YP_004214301.1 3877782 R 741091 CDS YP_004214302.1 322834275 10214613 3879110..3880480 1 NC_015061.1 KEGG: ccb:Clocel_2983 fibronectin type III domain-containing protein; hypothetical protein 3880480 10214613 Rahaq_3584 Rahnella sp. Y9602 hypothetical protein YP_004214302.1 3879110 D 741091 CDS YP_004214303.1 322834276 10214614 complement(3880561..3881565) 1 NC_015061.1 PFAM: acyltransferase 3; KEGG: vvu:VV2_1626 hypothetical protein; acyltransferase 3881565 10214614 Rahaq_3585 Rahnella sp. Y9602 acyltransferase YP_004214303.1 3880561 R 741091 CDS YP_004214304.1 322834277 10214615 3881727..3882761 1 NC_015061.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ppr:PBPRB1640 hypothetical protein; transposase IS116/IS110/IS902 family protein 3882761 10214615 Rahaq_3586 Rahnella sp. Y9602 transposase IS116/IS110/IS902 family protein YP_004214304.1 3881727 D 741091 CDS YP_004214305.1 322834278 10214617 complement(3883820..3884908) 1 NC_015061.1 KEGG: kpu:KP1_3711 GDP-D-mannose dehydratase; PFAM: NAD-dependent epimerase/dehydratase; GDP-mannose 4,6-dehydratase 3884908 10214617 Rahaq_3588 Rahnella sp. Y9602 GDP-mannose 4,6-dehydratase YP_004214305.1 3883820 R 741091 CDS YP_004214306.1 322834279 10214618 complement(3885060..3886499) 1 NC_015061.1 PFAM: polysaccharide biosynthesis protein; KEGG: kpn:KPN_02500 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 3886499 10214618 Rahaq_3589 Rahnella sp. Y9602 polysaccharide biosynthesis protein YP_004214306.1 3885060 R 741091 CDS YP_004214307.1 322834280 10214619 complement(3886669..3887823) 1 NC_015061.1 PFAM: glycosyl transferase group 1; KEGG: see:SNSL254_A2264 glycosyl transferase, group 1; group 1 glycosyl transferase 3887823 10214619 Rahaq_3590 Rahnella sp. Y9602 group 1 glycosyl transferase YP_004214307.1 3886669 R 741091 CDS YP_004214308.1 322834281 10214620 complement(3887909..3889288) 1 NC_015061.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: ecr:ECIAI1_2103 phosphomannomutase (PMM); phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II 3889288 10214620 Rahaq_3591 Rahnella sp. Y9602 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II YP_004214308.1 3887909 R 741091 CDS YP_004214309.1 322834282 10214621 complement(3889303..3890724) 1 NC_015061.1 TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: sgl:SG1114 mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase; mannose-6-phosphate isomerase type II; mannose-1-phosphate guanylyltransferase 3890724 10214621 Rahaq_3592 Rahnella sp. Y9602 mannose-1-phosphate guanylyltransferase YP_004214309.1 3889303 R 741091 CDS YP_004214310.1 322834283 10214622 complement(3890875..3892098) 1 NC_015061.1 PFAM: glycosyl transferase group 1; KEGG: eta:ETA_13310 exopolysaccharide biosynthesis glycosyl transferase; group 1 glycosyl transferase 3892098 10214622 Rahaq_3593 Rahnella sp. Y9602 group 1 glycosyl transferase YP_004214310.1 3890875 R 741091 CDS YP_004214311.1 322834284 10214623 complement(3892314..3893309) 1 NC_015061.1 PFAM: glycosyl transferase group 1; KEGG: see:SNSL254_A2265 second mannosyl transferase; group 1 glycosyl transferase 3893309 10214623 Rahaq_3594 Rahnella sp. Y9602 group 1 glycosyl transferase YP_004214311.1 3892314 R 741091 CDS YP_004214312.1 322834285 10214624 complement(3893324..3894481) 1 NC_015061.1 PFAM: glycosyl transferase group 1; KEGG: bcx:BCA_5415 glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 3894481 10214624 Rahaq_3595 Rahnella sp. Y9602 group 1 glycosyl transferase YP_004214312.1 3893324 R 741091 CDS YP_004214313.1 322834286 10214625 complement(3894654..3896825) 1 NC_015061.1 TIGRFAM: capsular exopolysaccharide family; KEGG: spe:Spro_1585 non-specific protein-tyrosine kinase; PFAM: lipopolysaccharide biosynthesis protein; capsular exopolysaccharide family protein 3896825 10214625 Rahaq_3596 Rahnella sp. Y9602 capsular exopolysaccharide family protein YP_004214313.1 3894654 R 741091 CDS YP_004214314.1 322834287 10214626 complement(3896846..3897280) 1 NC_015061.1 KEGG: spe:Spro_1584 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; protein tyrosine phosphatase 3897280 10214626 Rahaq_3597 Rahnella sp. Y9602 protein tyrosine phosphatase YP_004214314.1 3896846 R 741091 CDS YP_004214315.1 322834288 10214627 complement(3897283..3898425) 1 NC_015061.1 PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: kpu:KP1_3720 capsule polysaccharide export protein precursor; polysaccharide export protein 3898425 10214627 Rahaq_3598 Rahnella sp. Y9602 polysaccharide export protein YP_004214315.1 3897283 R 741091 CDS YP_004214316.1 322834289 10214628 complement(3898514..3899944) 1 NC_015061.1 TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase, WbaP; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: ecx:EcHS_A2190 sugar transferase; PFAM: sugar transferase; Undecaprenyl-phosphate galactose phosphotransferase, WbaP 3899944 10214628 Rahaq_3599 Rahnella sp. Y9602 Undecaprenyl-phosphate galactose phosphotransferase, WbaP YP_004214316.1 3898514 R 741091 CDS YP_004214317.1 322834290 10214629 complement(3900115..3902208) 1 NC_015061.1 PFAM: protein of unknown function DUF940 membrane lipoprotein; KEGG: ebi:EbC_03020 conserved uncharacterized protein; hypothetical protein 3902208 10214629 Rahaq_3600 Rahnella sp. Y9602 hypothetical protein YP_004214317.1 3900115 R 741091 CDS YP_004214318.1 322834291 10214630 complement(3902205..3902948) 1 NC_015061.1 PFAM: protein of unknown function DUF1017; KEGG: pam:PANA_0243 YmcB; hypothetical protein 3902948 10214630 Rahaq_3601 Rahnella sp. Y9602 hypothetical protein YP_004214318.1 3902205 R 741091 CDS YP_004214319.1 322834292 10214631 complement(3902945..3903601) 1 NC_015061.1 KEGG: ebi:EbC_03000 lipoprotein YmcC; lipoprotein YmcC 3903601 10214631 Rahaq_3602 Rahnella sp. Y9602 lipoprotein YmcC YP_004214319.1 3902945 R 741091 CDS YP_004214320.1 322834293 10214632 complement(3903676..3903891) 1 NC_015061.1 KEGG: pam:PANA_0245 YjbE; hypothetical protein 3903891 10214632 Rahaq_3603 Rahnella sp. Y9602 hypothetical protein YP_004214320.1 3903676 R 741091 CDS YP_004214321.1 322834294 10214633 complement(3904180..3904866) 1 NC_015061.1 KEGG: yen:YE1324 hypothetical protein; PFAM: EAL domain protein; SMART: EAL domain protein; diguanylate phosphodiesterase 3904866 10214633 Rahaq_3604 Rahnella sp. Y9602 diguanylate phosphodiesterase YP_004214321.1 3904180 R 741091 CDS YP_004214322.1 322834295 10214634 complement(3904941..3905537) 1 NC_015061.1 KEGG: ent:Ent638_0524 DNA-binding transcriptional activator BglJ; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; LuxR family transcriptional regulator 3905537 10214634 Rahaq_3605 Rahnella sp. Y9602 LuxR family transcriptional regulator YP_004214322.1 3904941 R 741091 CDS YP_004214323.1 322834296 10214635 complement(3905638..3905730) 1 NC_015061.1 hypothetical protein 3905730 10214635 Rahaq_3606 Rahnella sp. Y9602 hypothetical protein YP_004214323.1 3905638 R 741091 CDS YP_004214324.1 322834297 10214636 complement(3906525..3909236) 1 NC_015061.1 KEGG: ent:Ent638_2565 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; P-type HAD superfamily ATPase 3909236 10214636 Rahaq_3607 Rahnella sp. Y9602 P-type HAD superfamily ATPase YP_004214324.1 3906525 R 741091 CDS YP_004214325.1 322834298 10214637 3909527..3910612 1 NC_015061.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: kpe:KPK_A0100 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 3910612 10214637 Rahaq_3608 Rahnella sp. Y9602 RND family efflux transporter MFP subunit YP_004214325.1 3909527 D 741091 CDS YP_004214326.1 322834299 10214638 3910612..3913677 1 NC_015061.1 PFAM: acriflavin resistance protein; KEGG: ent:Ent638_2568 acriflavin resistance protein; acriflavin resistance protein 3913677 10214638 Rahaq_3609 Rahnella sp. Y9602 acriflavin resistance protein YP_004214326.1 3910612 D 741091 CDS YP_004214327.1 322834300 10214639 3913674..3914639 1 NC_015061.1 KEGG: kpe:KPK_A0098 hypothetical protein; hypothetical protein 3914639 10214639 Rahaq_3610 Rahnella sp. Y9602 hypothetical protein YP_004214327.1 3913674 D 741091 CDS YP_004214328.1 322834301 10214640 complement(3914703..3914957) 1 NC_015061.1 KEGG: ses:SARI_03126 hypothetical protein; hypothetical protein 3914957 10214640 Rahaq_3611 Rahnella sp. Y9602 hypothetical protein YP_004214328.1 3914703 R 741091 CDS YP_004214329.1 322834302 10214641 complement(3915063..3915317) 1 NC_015061.1 KEGG: ses:SARI_03126 hypothetical protein; hypothetical protein 3915317 10214641 Rahaq_3612 Rahnella sp. Y9602 hypothetical protein YP_004214329.1 3915063 R 741091 CDS YP_004214330.1 322834303 10214642 complement(3915307..3915963) 1 NC_015061.1 KEGG: ses:SARI_03125 hypothetical protein; hypothetical protein 3915963 10214642 Rahaq_3613 Rahnella sp. Y9602 hypothetical protein YP_004214330.1 3915307 R 741091 CDS YP_004214331.1 322834304 10214643 complement(3916094..3916642) 1 NC_015061.1 KEGG: xne:XNC1_4392 DNA-binding protein; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 3916642 10214643 Rahaq_3614 Rahnella sp. Y9602 helix-turn-helix domain-containing protein YP_004214331.1 3916094 R 741091 CDS YP_004214332.1 322834305 10214644 3916741..3917409 1 NC_015061.1 PFAM: AzlC family protein; KEGG: pam:PANA_4178 AzlC; AzlC family protein 3917409 10214644 Rahaq_3615 Rahnella sp. Y9602 AzlC family protein YP_004214332.1 3916741 D 741091 CDS YP_004214333.1 322834306 10214645 3917406..3917729 1 NC_015061.1 PFAM: branched-chain amino acid transport; KEGG: pam:PANA_4177 hypothetical protein; branched-chain amino acid transport 3917729 10214645 Rahaq_3616 Rahnella sp. Y9602 branched-chain amino acid transport YP_004214333.1 3917406 D 741091 CDS YP_004214334.1 322834307 10214646 complement(3917780..3919141) 1 NC_015061.1 PFAM: amino acid permease-associated region; KEGG: sfv:SFV_2073 amino acid/amine transport protein; amino acid permease 3919141 10214646 Rahaq_3617 Rahnella sp. Y9602 amino acid permease YP_004214334.1 3917780 R 741091 CDS YP_004214335.1 322834308 10214647 3919749..3920555 1 NC_015061.1 KEGG: pct:PC1_0650 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 3920555 10214647 Rahaq_3618 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004214335.1 3919749 D 741091 CDS YP_004214336.1 322834309 10214648 complement(3920542..3921180) 1 NC_015061.1 PFAM: lysine exporter protein (LYSE/YGGA); KEGG: eta:ETA_33760 transporter, LysE family; lysine exporter protein LysE/YggA 3921180 10214648 Rahaq_3619 Rahnella sp. Y9602 lysine exporter protein LysE/YggA YP_004214336.1 3920542 R 741091 CDS YP_004214337.1 322834310 10214649 complement(3921177..3922469) 1 NC_015061.1 KEGG: cwo:Cwoe_1009 hypothetical protein; hypothetical protein 3922469 10214649 Rahaq_3620 Rahnella sp. Y9602 hypothetical protein YP_004214337.1 3921177 R 741091 CDS YP_004214338.1 322834311 10214650 3922625..3923284 1 NC_015061.1 PFAM: protein of unknown function DUF1345; KEGG: pam:PANA_4078 hypothetical protein; hypothetical protein 3923284 10214650 Rahaq_3621 Rahnella sp. Y9602 hypothetical protein YP_004214338.1 3922625 D 741091 CDS YP_004214339.1 322834312 10214651 3923439..3924257 1 NC_015061.1 KEGG: ddc:Dd586_1102 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 3924257 10214651 Rahaq_3622 Rahnella sp. Y9602 family 3 extracellular solute-binding protein YP_004214339.1 3923439 D 741091 CDS YP_004214340.1 322834313 10214652 3924257..3925081 1 NC_015061.1 KEGG: dze:Dd1591_2999 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 3925081 10214652 Rahaq_3623 Rahnella sp. Y9602 polar amino acid ABC transporter inner membrane subunit YP_004214340.1 3924257 D 741091 CDS YP_004214341.1 322834314 10214653 3925126..3926268 1 NC_015061.1 PFAM: aminotransferase class I and II; KEGG: sro:Sros_2228 aminotransferase protein; class I and II aminotransferase 3926268 10214653 Rahaq_3624 Rahnella sp. Y9602 class I and II aminotransferase YP_004214341.1 3925126 D 741091 CDS YP_004214342.1 322834315 10214654 complement(3926357..3928141) 1 NC_015061.1 PFAM: glycoside hydrolase family 19; PKD domain containing protein; Carbohydrate-binding family V/XII; KEGG: cko:CKO_02215 hypothetical protein; SMART: Carbohydrate-binding family V/XII; PKD domain containing protein; chitinase 3928141 10214654 Rahaq_3625 Rahnella sp. Y9602 chitinase YP_004214342.1 3926357 R 741091 CDS YP_004214343.1 322834316 10214655 complement(3928431..3928697) 1 NC_015061.1 KEGG: ctu:Ctu_06420 hypothetical protein; hypothetical protein 3928697 10214655 Rahaq_3626 Rahnella sp. Y9602 hypothetical protein YP_004214343.1 3928431 R 741091 CDS YP_004214344.1 322834317 10214656 complement(3928963..3929904) 1 NC_015061.1 PFAM: regulatory protein LysR; KEGG: sek:SSPA0013 regulatory protein; LysR family transcriptional regulator 3929904 10214656 Rahaq_3627 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004214344.1 3928963 R 741091 CDS YP_004214345.1 322834318 10214657 complement(3930047..3930589) 1 NC_015061.1 PFAM: Peptidoglycan binding domain; protein of unknown function DUF847; KEGG: ent:Ent638_1027 hypothetical protein; Peptidoglycan binding domain protein 3930589 10214657 Rahaq_3628 Rahnella sp. Y9602 Peptidoglycan binding domain protein YP_004214345.1 3930047 R 741091 CDS YP_004214346.1 322834319 10214658 complement(3930612..3931058) 1 NC_015061.1 KEGG: esa:ESA_03319 hypothetical protein; CadC family transcriptional regulator 3931058 10214658 Rahaq_3629 Rahnella sp. Y9602 CadC family transcriptional regulator YP_004214346.1 3930612 R 741091 CDS YP_004214347.1 322834320 10214659 3931505..3933586 1 NC_015061.1 PFAM: glycoside hydrolase family 18; Carbohydrate-binding family V/XII; KEGG: esa:ESA_03317 hypothetical protein; SMART: chitinase II; Carbohydrate-binding family V/XII; chitinase 3933586 10214659 Rahaq_3630 Rahnella sp. Y9602 chitinase YP_004214347.1 3931505 D 741091 CDS YP_004214348.1 322834321 10214660 complement(3933648..3934544) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pfl:PFL_2915 LysR family transcriptional regulator; LysR family transcriptional regulator 3934544 10214660 Rahaq_3631 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004214348.1 3933648 R 741091 CDS YP_004214349.1 322834322 10214661 3934662..3936158 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: bte:BTH_I3246 EmrB/QacA family drug resistance transporter; major facilitator superfamily protein 3936158 10214661 Rahaq_3632 Rahnella sp. Y9602 major facilitator superfamily protein YP_004214349.1 3934662 D 741091 CDS YP_004214350.1 322834323 10214662 3936573..3937118 1 NC_015061.1 PFAM: Spore coat protein U; KEGG: pag:PLES_50341 hypothetical protein; Spore coat protein U 3937118 10214662 Rahaq_3633 Rahnella sp. Y9602 Spore coat protein U YP_004214350.1 3936573 D 741091 CDS YP_004214351.1 322834324 10214663 3937181..3937699 1 NC_015061.1 PFAM: Spore coat protein U; KEGG: pap:PSPA7_5298 hypothetical protein; Spore coat protein U 3937699 10214663 Rahaq_3634 Rahnella sp. Y9602 Spore coat protein U YP_004214351.1 3937181 D 741091 CDS YP_004214352.1 322834325 10214664 3937708..3938253 1 NC_015061.1 PFAM: Spore coat protein U; KEGG: pwa:Pecwa_1448 spore coat U domain protein; Spore coat protein U 3938253 10214664 Rahaq_3635 Rahnella sp. Y9602 Spore coat protein U YP_004214352.1 3937708 D 741091 CDS YP_004214353.1 322834326 10214665 3938273..3939070 1 NC_015061.1 KEGG: eca:ECA3075 fimbrial chaperone; fimbrial chaperone 3939070 10214665 Rahaq_3636 Rahnella sp. Y9602 fimbrial chaperone YP_004214353.1 3938273 D 741091 CDS YP_004214354.1 322834327 10214666 3939089..3941536 1 NC_015061.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: pct:PC1_2819 fimbrial biogenesis outer membrane usher protein; fimbrial biogenesis outer membrane usher protein 3941536 10214666 Rahaq_3637 Rahnella sp. Y9602 fimbrial biogenesis outer membrane usher protein YP_004214354.1 3939089 D 741091 CDS YP_004214355.1 322834328 10214667 3941533..3942501 1 NC_015061.1 PFAM: Spore coat protein U; KEGG: pau:PA14_61550 hypothetical protein; Spore coat protein U 3942501 10214667 Rahaq_3638 Rahnella sp. Y9602 Spore coat protein U YP_004214355.1 3941533 D 741091 CDS YP_004214356.1 322834329 10214668 complement(3942558..3943037) 1 NC_015061.1 PFAM: Cold-shock protein DNA-binding; KEGG: enc:ECL_03124 cold-shock DNA-binding domain protein; cold-shock protein 3943037 10214668 Rahaq_3639 Rahnella sp. Y9602 cold-shock protein YP_004214356.1 3942558 R 741091 CDS YP_004214357.1 322834330 10214669 complement(3943147..3943800) 1 NC_015061.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: har:HEAR1490 oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions, repair of alkylated DNA; 2OG-Fe(II) oxygenase 3943800 10214669 Rahaq_3640 Rahnella sp. Y9602 2OG-Fe(II) oxygenase YP_004214357.1 3943147 R 741091 CDS YP_004214358.1 322834331 10214670 3943938..3944756 1 NC_015061.1 PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; KEGG: bid:Bind_3294 shikimate dehydrogenase substrate binding subunit; shikimate dehydrogenase 3944756 10214670 Rahaq_3641 Rahnella sp. Y9602 shikimate dehydrogenase YP_004214358.1 3943938 D 741091 CDS YP_004214359.1 322834332 10214671 complement(3944818..3946155) 1 NC_015061.1 TIGRFAM: glucarate dehydratase; KEGG: pct:PC1_3395 glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein; glucarate dehydratase 3946155 10214671 Rahaq_3642 Rahnella sp. Y9602 glucarate dehydratase YP_004214359.1 3944818 R 741091 CDS YP_004214360.1 322834333 10214672 complement(3946184..3947527) 1 NC_015061.1 KEGG: eca:ECA3576 glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein; glucarate dehydratase 3947527 10214672 Rahaq_3643 Rahnella sp. Y9602 glucarate dehydratase YP_004214360.1 3946184 R 741091 CDS YP_004214361.1 322834334 10214673 complement(3947524..3948897) 1 NC_015061.1 KEGG: pct:PC1_3397 D-galactonate transporter; TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; d-galactonate transporter 3948897 10214673 Rahaq_3644 Rahnella sp. Y9602 d-galactonate transporter YP_004214361.1 3947524 R 741091 CDS YP_004214362.1 322834335 10214674 complement(3949124..3950284) 1 NC_015061.1 PFAM: sugar diacid recognition domain protein; KEGG: pct:PC1_3095 carbohydrate diacid transcriptional activator CdaR; CdaR family transcriptional regulator 3950284 10214674 Rahaq_3645 Rahnella sp. Y9602 CdaR family transcriptional regulator YP_004214362.1 3949124 R 741091 CDS YP_004214363.1 322834336 10214675 complement(3950522..3951973) 1 NC_015061.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: yen:YE0741 serine endoprotease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 3951973 10214675 Rahaq_3646 Rahnella sp. Y9602 protease Do YP_004214363.1 3950522 R 741091 CDS YP_004214364.1 322834337 10214676 complement(3952181..3953695) 1 NC_015061.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; KEGG: spe:Spro_0788 deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; deoxyguanosinetriphosphate triphosphohydrolase 3953695 10214676 Rahaq_3647 Rahnella sp. Y9602 deoxyguanosinetriphosphate triphosphohydrolase YP_004214364.1 3952181 R 741091 CDS YP_004214365.1 322834338 10214677 3953879..3954583 1 NC_015061.1 TIGRFAM: MTA/SAH nucleosidase; KEGG: spe:Spro_0787 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; PFAM: purine or other phosphorylase family 1; MTA/SAH nucleosidase 3954583 10214677 Rahaq_3648 Rahnella sp. Y9602 MTA/SAH nucleosidase YP_004214365.1 3953879 D 741091 CDS YP_004214366.1 322834339 10214678 3954583..3955389 1 NC_015061.1 PFAM: periplasmic binding protein; KEGG: pay:PAU_00826 vitamin b12-binding protein precursor; periplasmic binding protein 3955389 10214678 Rahaq_3649 Rahnella sp. Y9602 periplasmic binding protein YP_004214366.1 3954583 D 741091 CDS YP_004214367.1 322834340 10214679 3955721..3955966 1 NC_015061.1 KEGG: ebi:EbC_08000 conserved uncharacterized protein; hypothetical protein 3955966 10214679 Rahaq_3650 Rahnella sp. Y9602 hypothetical protein YP_004214367.1 3955721 D 741091 CDS YP_004214368.1 322834341 10214680 complement(3956074..3956433) 1 NC_015061.1 KEGG: spe:Spro_0783 iron-sulfur cluster assembly accessory protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; iron-sulfur cluster assembly accessory protein 3956433 10214680 Rahaq_3651 Rahnella sp. Y9602 iron-sulfur cluster assembly accessory protein YP_004214368.1 3956074 R 741091 CDS YP_004214369.1 322834342 10214681 complement(3956522..3957985) 1 NC_015061.1 PFAM: Cl- channel voltage-gated family protein; KEGG: spe:Spro_0782 chloride channel protein; Cl- channel voltage-gated family protein 3957985 10214681 Rahaq_3652 Rahnella sp. Y9602 Cl- channel voltage-gated family protein YP_004214369.1 3956522 R 741091 CDS YP_004214370.1 322834343 10214682 3958172..3959452 1 NC_015061.1 KEGG: yen:YE0734 glutamate-1-semialdehyde aminotransferase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; glutamate-1-semialdehyde-2,1-aminomutase 3959452 10214682 Rahaq_3653 Rahnella sp. Y9602 glutamate-1-semialdehyde-2,1-aminomutase YP_004214370.1 3958172 D 741091 CDS YP_004214371.1 322834344 10214683 complement(3959556..3961544) 1 NC_015061.1 PFAM: transport system permease protein; KEGG: spe:Spro_3976 iron-hydroxamate transporter permease subunit; transport system permease 3961544 10214683 Rahaq_3654 Rahnella sp. Y9602 transport system permease YP_004214371.1 3959556 R 741091 CDS YP_004214372.1 322834345 10214684 complement(3961541..3962443) 1 NC_015061.1 PFAM: periplasmic binding protein; KEGG: spe:Spro_3977 iron-hydroxamate transporter substrate-binding subunit; periplasmic binding protein 3962443 10214684 Rahaq_3655 Rahnella sp. Y9602 periplasmic binding protein YP_004214372.1 3961541 R 741091 CDS YP_004214373.1 322834346 10214685 complement(3962445..3963257) 1 NC_015061.1 KEGG: ypb:YPTS_0771 iron-hydroxamate transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3963257 10214685 Rahaq_3656 Rahnella sp. Y9602 ABC transporter YP_004214373.1 3962445 R 741091 CDS YP_004214374.1 322834347 10214686 complement(3963353..3965575) 1 NC_015061.1 KEGG: ecg:E2348C_0157 ferrichrome outer membrane transporter; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; TonB-dependent siderophore receptor 3965575 10214686 Rahaq_3657 Rahnella sp. Y9602 TonB-dependent siderophore receptor YP_004214374.1 3963353 R 741091 CDS YP_004214375.1 322834348 10214687 complement(3965872..3968499) 1 NC_015061.1 TIGRFAM: penicillin-binding protein 1B; KEGG: spe:Spro_3981 penicillin-binding protein 1B; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein 1B 3968499 10214687 Rahaq_3658 Rahnella sp. Y9602 penicillin-binding protein 1B YP_004214375.1 3965872 R 741091 CDS YP_004214376.1 322834349 10214688 complement(3968690..3971134) 1 NC_015061.1 TIGRFAM: ATP-dependent helicase HrpB; PFAM: Helicase ATP-dependent domain protein; helicase-associated domain protein; helicase domain protein; KEGG: spe:Spro_3982 ATP-dependent RNA helicase HrpB; SMART: DEAD-like helicase ; helicase domain protein; ATP-dependent helicase HrpB 3971134 10214688 Rahaq_3659 Rahnella sp. Y9602 ATP-dependent helicase HrpB YP_004214376.1 3968690 R 741091 CDS YP_004214377.1 322834350 10214689 3971231..3971773 1 NC_015061.1 KEGG: spe:Spro_3983 2'-5' RNA ligase; TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; 2'-5' RNA ligase 3971773 10214689 Rahaq_3660 Rahnella sp. Y9602 2'-5' RNA ligase YP_004214377.1 3971231 D 741091 CDS YP_004214378.1 322834351 10214690 3971822..3972556 1 NC_015061.1 KEGG: plu:plu0877 sugar fermentation stimulation protein A; TIGRFAM: sugar fermentation stimulation protein; PFAM: sugar fermentation stimulation protein; sugar fermentation stimulation protein 3972556 10214690 Rahaq_3661 Rahnella sp. Y9602 sugar fermentation stimulation protein YP_004214378.1 3971822 D 741091 CDS YP_004214379.1 322834352 10214691 3972787..3973242 1 NC_015061.1 TIGRFAM: RNA polymerase-binding protein DksA; KEGG: kpu:KP1_0973 RNA polymerase-binding transcription factor; TraR/DksA family transcriptional regulator 3973242 10214691 Rahaq_3662 Rahnella sp. Y9602 TraR/DksA family transcriptional regulator YP_004214379.1 3972787 D 741091 CDS YP_004214380.1 322834353 10214692 3973305..3974180 1 NC_015061.1 PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; KEGG: yen:YE0724 glutamyl-Q tRNA(Asp) synthetase; glutamyl/glutaminyl-tRNA synthetase 3974180 10214692 Rahaq_3663 Rahnella sp. Y9602 glutamyl/glutaminyl-tRNA synthetase YP_004214380.1 3973305 D 741091 CDS YP_004214381.1 322834354 10214693 3974313..3976019 1 NC_015061.1 KEGG: ypy:YPK_3470 poly(A) polymerase I; TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region; poly(A) polymerase 3976019 10214693 Rahaq_3664 Rahnella sp. Y9602 poly(A) polymerase YP_004214381.1 3974313 D 741091 CDS YP_004214382.1 322834355 10214694 3976016..3976495 1 NC_015061.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; KEGG: ypb:YPTS_0762 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 3976495 10214694 Rahaq_3665 Rahnella sp. Y9602 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_004214382.1 3976016 D 741091 CDS YP_004214383.1 322834356 10214695 complement(3976501..3977886) 1 NC_015061.1 KEGG: spe:Spro_3989 sensor protein QseC; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 3977886 10214695 Rahaq_3666 Rahnella sp. Y9602 integral membrane sensor signal transduction histidine kinase YP_004214383.1 3976501 R 741091 CDS YP_004214384.1 322834357 10214696 complement(3977883..3978569) 1 NC_015061.1 KEGG: spe:Spro_3990 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator 3978569 10214696 Rahaq_3667 Rahnella sp. Y9602 transcriptional regulator YP_004214384.1 3977883 R 741091 CDS YP_004214385.1 322834358 10214697 3978728..3979522 1 NC_015061.1 TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; KEGG: ypi:YpsIP31758_3343 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 3979522 10214697 Rahaq_3668 Rahnella sp. Y9602 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_004214385.1 3978728 D 741091 CDS YP_004214386.1 322834359 10214698 3979537..3980391 1 NC_015061.1 KEGG: yen:YE0719 pantoate--beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; cytidyltransferase-related domain protein; PFAM: Pantoate-beta-alanine ligase; pantoate--beta-alanine ligase 3980391 10214698 Rahaq_3669 Rahnella sp. Y9602 pantoate--beta-alanine ligase YP_004214386.1 3979537 D 741091 CDS YP_004214387.1 322834360 10214699 3980500..3980880 1 NC_015061.1 TIGRFAM: aspartate 1-decarboxylase; KEGG: pwa:Pecwa_1158 aspartate alpha-decarboxylase; PFAM: aspartate decarboxylase; aspartate 1-decarboxylase 3980880 10214699 Rahaq_3670 Rahnella sp. Y9602 aspartate 1-decarboxylase YP_004214387.1 3980500 D 741091 CDS YP_004214388.1 322834361 10214700 complement(3981024..3981794) 1 NC_015061.1 PFAM: ABC transporter; KEGG: spe:Spro_3995 ABC transporter; ABC transporter 3981794 10214700 Rahaq_3671 Rahnella sp. Y9602 ABC transporter YP_004214388.1 3981024 R 741091 CDS YP_004214389.1 322834362 10214701 complement(3981794..3982717) 1 NC_015061.1 KEGG: spe:Spro_3996 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3982717 10214701 Rahaq_3672 Rahnella sp. Y9602 ABC transporter YP_004214389.1 3981794 R 741091 CDS YP_004214390.1 322834363 10214702 3982853..3983509 1 NC_015061.1 KEGG: cko:CKO_03241 carbonic anhydrase; PFAM: carbonic anhydrase; carbonate dehydratase 3983509 10214702 Rahaq_3673 Rahnella sp. Y9602 carbonate dehydratase YP_004214390.1 3982853 D 741091 CDS YP_004214391.1 322834364 10214703 3984395..3984727 1 NC_015061.1 KEGG: cdl:CDR20291_2141 hypothetical protein; hypothetical protein 3984727 10214703 Rahaq_3674 Rahnella sp. Y9602 hypothetical protein YP_004214391.1 3984395 D 741091 CDS YP_004214392.1 322834365 10214704 complement(3985113..3985604) 1 NC_015061.1 KEGG: pay:PAU_02414 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; type VI secretion system effector 3985604 10214704 Rahaq_3675 Rahnella sp. Y9602 type VI secretion system effector YP_004214392.1 3985113 R 741091 CDS YP_004214393.1 322834366 10214705 complement(3985606..3986106) 1 NC_015061.1 KEGG: pay:PAU_02413 hypothetical protein; hypothetical protein 3986106 10214705 Rahaq_3676 Rahnella sp. Y9602 hypothetical protein YP_004214393.1 3985606 R 741091 CDS YP_004214394.1 322834367 10214706 complement(3986103..3986462) 1 NC_015061.1 KEGG: plu:plu2153 hypothetical protein; hypothetical protein 3986462 10214706 Rahaq_3677 Rahnella sp. Y9602 hypothetical protein YP_004214394.1 3986103 R 741091 CDS YP_004214395.1 322834368 10214707 complement(3986880..3987416) 1 NC_015061.1 TIGRFAM: hypoxanthine phosphoribosyltransferase; KEGG: yen:YE0713 hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 3987416 10214707 Rahaq_3678 Rahnella sp. Y9602 hypoxanthine phosphoribosyltransferase YP_004214395.1 3986880 R 741091 CDS YP_004214396.1 322834369 10214708 complement(3987630..3988403) 1 NC_015061.1 KEGG: spe:Spro_3574 DNA-bindng transcriptional repressor SrlR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator 3988403 10214708 Rahaq_3679 Rahnella sp. Y9602 DeoR family transcriptional regulator YP_004214396.1 3987630 R 741091 CDS YP_004214397.1 322834370 10214709 complement(3988483..3988845) 1 NC_015061.1 PFAM: glucitol operon activator; KEGG: spe:Spro_3573 DNA-binding transcriptional activator GutM; glucitol operon activator 3988845 10214709 Rahaq_3680 Rahnella sp. Y9602 glucitol operon activator YP_004214397.1 3988483 R 741091 CDS YP_004214398.1 322834371 10214710 complement(3988932..3989711) 1 NC_015061.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eay:EAM_0524 sorbitol-6-phosphate dehydrogenase; short-chain dehydrogenase/reductase SDR 3989711 10214710 Rahaq_3681 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004214398.1 3988932 R 741091 CDS YP_004214399.1 322834372 10214711 complement(3989734..3990096) 1 NC_015061.1 PFAM: PTS system glucitol/sorbitol-specific IIA component; KEGG: spe:Spro_3571 PTS system glucitol/sorbitol-specific transporter subunit IIA; PTS system glucitol/sorbitol-specific transporter subunit IIA 3990096 10214711 Rahaq_3682 Rahnella sp. Y9602 PTS system glucitol/sorbitol-specific transporter subunit IIA YP_004214399.1 3989734 R 741091 CDS YP_004214400.1 322834373 10214712 complement(3990106..3991095) 1 NC_015061.1 TIGRFAM: PTS system, glucitol/sorbitol-specific, IIBC subunit; KEGG: yen:YE1097 PTS system, glucitol/sorbitol-specific IIBC component; PFAM: Sorbitol phosphotransferase protein II domain-containing protein; PTS system glucitol/sorbitol-specific transporter subunit IIBC 3991095 10214712 Rahaq_3683 Rahnella sp. Y9602 PTS system glucitol/sorbitol-specific transporter subunit IIBC YP_004214400.1 3990106 R 741091 CDS YP_004214401.1 322834374 10214713 complement(3991143..3991691) 1 NC_015061.1 KEGG: yen:YE1098 PTS system, glucitol/sorbitol-specific IIC2 component; TIGRFAM: PTS system, glucitol/sorbitol-specific, IIC subunit; PFAM: PTS system protein II sorbitol-specific factor; PTS system glucitol/sorbitol-specific transporter subunit IIC 3991691 10214713 Rahaq_3684 Rahnella sp. Y9602 PTS system glucitol/sorbitol-specific transporter subunit IIC YP_004214401.1 3991143 R 741091 CDS YP_004214402.1 322834375 10214714 complement(3991950..3993554) 1 NC_015061.1 KEGG: spe:Spro_3999 multicopper oxidase; manually curated; PFAM: multicopper oxidase type 3; multicopper oxidase type 2; multicopper oxidase type 3 3993554 10214714 Rahaq_3685 Rahnella sp. Y9602 multicopper oxidase type 3 YP_004214402.1 3991950 R 741091 CDS YP_004214403.1 322834376 10214715 3993765..3994112 1 NC_015061.1 KEGG: yen:YE0711 hypothetical protein; hypothetical protein 3994112 10214715 Rahaq_3686 Rahnella sp. Y9602 hypothetical protein YP_004214403.1 3993765 D 741091 CDS YP_004214404.1 322834377 10214716 3994326..3995201 1 NC_015061.1 KEGG: spe:Spro_4001 spermidine synthase; TIGRFAM: spermidine synthase; PFAM: Spermine synthase; spermidine synthase 3995201 10214716 Rahaq_3687 Rahnella sp. Y9602 spermidine synthase YP_004214404.1 3994326 D 741091 CDS YP_004214405.1 322834378 10214717 3995230..3996024 1 NC_015061.1 TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; KEGG: eca:ECA3334 S-adenosylmethionine decarboxylase; PFAM: S-adenosylmethionine decarboxylase related; S-adenosylmethionine decarboxylase 3996024 10214717 Rahaq_3688 Rahnella sp. Y9602 S-adenosylmethionine decarboxylase YP_004214405.1 3995230 D 741091 CDS YP_004214406.1 322834379 10214718 3996455..3997330 1 NC_015061.1 KEGG: hha:Hhal_1884 hypothetical protein; hypothetical protein 3997330 10214718 Rahaq_3689 Rahnella sp. Y9602 hypothetical protein YP_004214406.1 3996455 D 741091 CDS YP_004214407.1 322834380 10214719 3997434..3998324 1 NC_015061.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: yen:YE0707 hypothetical protein; hypothetical protein 3998324 10214719 Rahaq_3690 Rahnella sp. Y9602 hypothetical protein YP_004214407.1 3997434 D 741091 CDS YP_004214408.1 322834381 10214720 complement(3998314..3998679) 1 NC_015061.1 PFAM: Uncharacterised conserved protein UCP006287; KEGG: spe:Spro_4007 hypothetical protein; hypothetical protein 3998679 10214720 Rahaq_3691 Rahnella sp. Y9602 hypothetical protein YP_004214408.1 3998314 R 741091 CDS YP_004214409.1 322834382 10214721 complement(3998756..4001353) 1 NC_015061.1 KEGG: yen:YE0705 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; TIGRFAM: aconitate hydratase 2; PFAM: Aconitase B; aconitate hydratase domain-containing protein; aconitate hydratase 2 4001353 10214721 Rahaq_3692 Rahnella sp. Y9602 aconitate hydratase 2 YP_004214409.1 3998756 R 741091 CDS YP_004214410.1 322834383 10214722 4001975..4002490 1 NC_015061.1 KEGG: ppp:PHYPADRAFT_92527 hypothetical protein; hypothetical protein 4002490 10214722 Rahaq_3693 Rahnella sp. Y9602 hypothetical protein YP_004214410.1 4001975 D 741091 CDS YP_004214411.1 322834384 10214723 complement(4002596..4003249) 1 NC_015061.1 PFAM: Fimbrial protein domain-containing protein; KEGG: esa:ESA_02541 hypothetical protein; fimbrial protein domain-containing protein 4003249 10214723 Rahaq_3694 Rahnella sp. Y9602 fimbrial protein domain-containing protein YP_004214411.1 4002596 R 741091 CDS YP_004214412.1 322834385 10214724 complement(4003270..4003854) 1 NC_015061.1 PFAM: Fimbrial protein domain-containing protein; KEGG: kpu:KP1_0597 fimbrial protein; fimbrial protein domain-containing protein 4003854 10214724 Rahaq_3695 Rahnella sp. Y9602 fimbrial protein domain-containing protein YP_004214412.1 4003270 R 741091 CDS YP_004214413.1 322834386 10214725 complement(4004117..4005205) 1 NC_015061.1 PFAM: extracellular solute-binding protein family 1; KEGG: ypy:YPK_2171 extracellular solute-binding protein; extracellular solute-binding protein 4005205 10214725 Rahaq_3696 Rahnella sp. Y9602 extracellular solute-binding protein YP_004214413.1 4004117 R 741091 CDS YP_004214414.1 322834387 10214726 complement(4005230..4006066) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yps:YPTB2014 ABC transporter permease subunit; binding-protein-dependent transport system inner membrane protein 4006066 10214726 Rahaq_3697 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004214414.1 4005230 R 741091 CDS YP_004214415.1 322834388 10214727 complement(4006063..4006926) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypb:YPTS_2073 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4006926 10214727 Rahaq_3698 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004214415.1 4006063 R 741091 CDS YP_004214416.1 322834389 10214728 complement(4006913..4008004) 1 NC_015061.1 KEGG: ypb:YPTS_2074 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 4008004 10214728 Rahaq_3699 Rahnella sp. Y9602 ABC transporter YP_004214416.1 4006913 R 741091 CDS YP_004214417.1 322834390 10214729 4008233..4009063 1 NC_015061.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: ypb:YPTS_2075 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 4009063 10214729 Rahaq_3700 Rahnella sp. Y9602 glycerophosphoryl diester phosphodiesterase YP_004214417.1 4008233 D 741091 CDS YP_004214418.1 322834391 10214730 4009086..4010198 1 NC_015061.1 PFAM: ROK family protein; KEGG: ypb:YPTS_2076 ROK family protein; ROK family protein 4010198 10214730 Rahaq_3701 Rahnella sp. Y9602 ROK family protein YP_004214418.1 4009086 D 741091 CDS YP_004214419.1 322834392 10214732 complement(4012877..4014301) 1 NC_015061.1 KEGG: spe:Spro_4009 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; dihydrolipoamide dehydrogenase 4014301 10214732 Rahaq_3703 Rahnella sp. Y9602 dihydrolipoamide dehydrogenase YP_004214419.1 4012877 R 741091 CDS YP_004214420.1 322834393 10214733 complement(4014513..4016408) 1 NC_015061.1 KEGG: eca:ECA3788 dihydrolipoamide acetyltransferase; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 4016408 10214733 Rahaq_3704 Rahnella sp. Y9602 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase YP_004214420.1 4014513 R 741091 CDS YP_004214421.1 322834394 10214734 complement(4016422..4019085) 1 NC_015061.1 KEGG: spe:Spro_4011 pyruvate dehydrogenase subunit E1; TIGRFAM: 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; PFAM: Transketolase domain-containing protein; 2-oxo-acid dehydrogenase E1 4019085 10214734 Rahaq_3705 Rahnella sp. Y9602 2-oxo-acid dehydrogenase E1 YP_004214421.1 4016422 R 741091 CDS YP_004214422.1 322834395 10214735 complement(4019249..4020019) 1 NC_015061.1 KEGG: spe:Spro_4012 transcriptional regulator PdhR; PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 4020019 10214735 Rahaq_3706 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004214422.1 4019249 R 741091 CDS YP_004214423.1 322834396 10214736 4020449..4021819 1 NC_015061.1 PFAM: amino acid permease-associated region; KEGG: eta:ETA_08120 aromatic amino acid transporter; amino acid permease 4021819 10214736 Rahaq_3707 Rahnella sp. Y9602 amino acid permease YP_004214423.1 4020449 D 741091 CDS YP_004214424.1 322834397 10214737 4022036..4023478 1 NC_015061.1 KEGG: spe:Spro_4014 sugar (glycoside-pentoside-hexuronide) transporter; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; sugar (Glycoside-Pentoside-Hexuronide) transporter 4023478 10214737 Rahaq_3708 Rahnella sp. Y9602 sugar (Glycoside-Pentoside-Hexuronide) transporter YP_004214424.1 4022036 D 741091 CDS YP_004214425.1 322834398 10214738 4023471..4024445 1 NC_015061.1 KEGG: eca:ECA3793 putatuve glycosysl hydrolase; PFAM: glycoside hydrolase family 43; alpha-N-arabinofuranosidase 4024445 10214738 Rahaq_3709 Rahnella sp. Y9602 alpha-N-arabinofuranosidase YP_004214425.1 4023471 D 741091 CDS YP_004214426.1 322834399 10214739 complement(4024517..4025371) 1 NC_015061.1 KEGG: spe:Spro_0780 regulatory protein AmpE; signaling modulator of AmpD, AmpE 4025371 10214739 Rahaq_3710 Rahnella sp. Y9602 signaling modulator of AmpD, AmpE YP_004214426.1 4024517 R 741091 CDS YP_004214427.1 322834400 10214740 complement(4025431..4026003) 1 NC_015061.1 KEGG: esa:ESA_03229 N-acetyl-anhydromuranmyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 4026003 10214740 Rahaq_3711 Rahnella sp. Y9602 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD YP_004214427.1 4025431 R 741091 CDS YP_004214428.1 322834401 10214741 4026098..4026991 1 NC_015061.1 TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: spe:Spro_0779 quinolinate phosphoribosyltransferase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 4026991 10214741 Rahaq_3712 Rahnella sp. Y9602 nicotinate-nucleotide pyrophosphorylase YP_004214428.1 4026098 D 741091 CDS YP_004214429.1 322834402 10214742 4027283..4027729 1 NC_015061.1 KEGG: spe:Spro_0778 major pilin subunit; major pilin subunit 4027729 10214742 Rahaq_3713 Rahnella sp. Y9602 major pilin subunit YP_004214429.1 4027283 D 741091 CDS YP_004214430.1 322834403 10214743 4027729..4029225 1 NC_015061.1 PFAM: type II secretion system protein E; KEGG: spe:Spro_0777 hypothetical protein; type II secretion system protein E 4029225 10214743 Rahaq_3714 Rahnella sp. Y9602 type II secretion system protein E YP_004214430.1 4027729 D 741091 CDS YP_004214431.1 322834404 10214744 4029222..4030442 1 NC_015061.1 PFAM: Type II secretion system F domain; KEGG: spe:Spro_0776 type IV pilin biogenesis protein; type II secretion system F domain-containing protein 4030442 10214744 Rahaq_3715 Rahnella sp. Y9602 type II secretion system F domain-containing protein YP_004214431.1 4029222 D 741091 CDS YP_004214432.1 322834405 10214745 complement(4030496..4031539) 1 NC_015061.1 KEGG: yen:YE0686 guanosine 5'-monophosphate oxidoreductase; TIGRFAM: guanosine monophosphate reductase; PFAM: IMP dehydrogenase/GMP reductase; guanosine monophosphate reductase 4031539 10214745 Rahaq_3716 Rahnella sp. Y9602 guanosine monophosphate reductase YP_004214432.1 4030496 R 741091 CDS YP_004214433.1 322834406 10214746 4031782..4032378 1 NC_015061.1 TIGRFAM: dephospho-CoA kinase; KEGG: spe:Spro_0774 dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase 4032378 10214746 Rahaq_3717 Rahnella sp. Y9602 dephospho-CoA kinase YP_004214433.1 4031782 D 741091 CDS YP_004214434.1 322834407 10214747 4032404..4033156 1 NC_015061.1 PFAM: protein of unknown function DUF1342; KEGG: spe:Spro_0773 hypothetical protein; hypothetical protein 4033156 10214747 Rahaq_3718 Rahnella sp. Y9602 hypothetical protein YP_004214434.1 4032404 D 741091 CDS YP_004214435.1 322834408 10214748 4033166..4033363 1 NC_015061.1 PFAM: protein of unknown function DUF329; KEGG: yen:YE0683 zinc-binding protein; hypothetical protein 4033363 10214748 Rahaq_3719 Rahnella sp. Y9602 hypothetical protein YP_004214435.1 4033166 D 741091 CDS YP_004214436.1 322834409 10214749 4033481..4034803 1 NC_015061.1 PFAM: transposase IS4 family protein; KEGG: dda:Dd703_2863 transposase IS4 family protein; transposase IS4 family protein 4034803 10214749 Rahaq_3720 Rahnella sp. Y9602 transposase IS4 family protein YP_004214436.1 4033481 D 741091 CDS YP_004214437.1 322834410 10214750 complement(4034857..4035258) 1 NC_015061.1 KEGG: spe:Spro_0771 nucleoside triphosphate pyrophosphohydrolase; TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; mutator MutT protein 4035258 10214750 Rahaq_3721 Rahnella sp. Y9602 mutator MutT protein YP_004214437.1 4034857 R 741091 CDS YP_004214438.1 322834411 10214751 complement(4035373..4038090) 1 NC_015061.1 KEGG: ypb:YPTS_0724 preprotein translocase subunit SecA; TIGRFAM: preprotein translocase SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; SEC-C motif domain protein; preprotein translocase subunit SecA 4038090 10214751 Rahaq_3722 Rahnella sp. Y9602 preprotein translocase subunit SecA YP_004214438.1 4035373 R 741091 CDS YP_004214439.1 322834412 10214752 complement(4038171..4038698) 1 NC_015061.1 PFAM: secretion monitor family proten; KEGG: yen:YE0680 SecA regulator SecM; secretion monitor family proten 4038698 10214752 Rahaq_3723 Rahnella sp. Y9602 secretion monitor family proten YP_004214439.1 4038171 R 741091 CDS YP_004214440.1 322834413 10214753 4038725..4039249 1 NC_015061.1 PFAM: protein of unknown function DUF721; KEGG: spe:Spro_0768 hypothetical protein; hypothetical protein 4039249 10214753 Rahaq_3724 Rahnella sp. Y9602 hypothetical protein YP_004214440.1 4038725 D 741091 CDS YP_004214441.1 322834414 10214754 complement(4039265..4040209) 1 NC_015061.1 KEGG: efe:EFER_0118 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; UDP-3-0-acyl N-acetylglucosamine deacetylase 4040209 10214754 Rahaq_3725 Rahnella sp. Y9602 UDP-3-0-acyl N-acetylglucosamine deacetylase YP_004214441.1 4039265 R 741091 CDS YP_004214442.1 322834415 10214755 complement(4040282..4041436) 1 NC_015061.1 KEGG: pam:PANA_0724 FtsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain; cell division protein FtsZ 4041436 10214755 Rahaq_3726 Rahnella sp. Y9602 cell division protein FtsZ YP_004214442.1 4040282 R 741091 CDS YP_004214443.1 322834416 10214756 complement(4041508..4042764) 1 NC_015061.1 KEGG: spe:Spro_0765 cell division protein FtsA; TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; cell division protein FtsA 4042764 10214756 Rahaq_3727 Rahnella sp. Y9602 cell division protein FtsA YP_004214443.1 4041508 R 741091 CDS YP_004214444.1 322834417 10214757 complement(4042761..4043597) 1 NC_015061.1 PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: spe:Spro_0764 cell division protein FtsQ; cell division protein FtsQ 4043597 10214757 Rahaq_3728 Rahnella sp. Y9602 cell division protein FtsQ YP_004214444.1 4042761 R 741091 CDS YP_004214445.1 322834418 10214758 complement(4043599..4044519) 1 NC_015061.1 TIGRFAM: D-alanine/D-alanine ligase; KEGG: spe:Spro_0763 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; D-alanine--D-alanine ligase 4044519 10214758 Rahaq_3729 Rahnella sp. Y9602 D-alanine--D-alanine ligase YP_004214445.1 4043599 R 741091 CDS YP_004214446.1 322834419 10214759 complement(4044512..4045999) 1 NC_015061.1 KEGG: spe:Spro_0762 UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; UDP-N-acetylmuramate--L-alanine ligase 4045999 10214759 Rahaq_3730 Rahnella sp. Y9602 UDP-N-acetylmuramate--L-alanine ligase YP_004214446.1 4044512 R 741091 CDS YP_004214447.1 322834420 10214760 complement(4046066..4047133) 1 NC_015061.1 KEGG: eca:ECA3815 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain; UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-UDP N- acetylglucosamine transferase 4047133 10214760 Rahaq_3731 Rahnella sp. Y9602 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-UDP N- acetylglucosamine transferase YP_004214447.1 4046066 R 741091 CDS YP_004214448.1 322834421 10214761 complement(4047130..4048332) 1 NC_015061.1 KEGG: yen:YE0671 cell division protein FtsW; TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; cell division protein FtsW 4048332 10214761 Rahaq_3732 Rahnella sp. Y9602 cell division protein FtsW YP_004214448.1 4047130 R 741091 CDS YP_004214449.1 322834422 10214762 complement(4048332..4049648) 1 NC_015061.1 KEGG: spe:Spro_0759 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramoylalanine--D-glutamate ligase 4049648 10214762 Rahaq_3733 Rahnella sp. Y9602 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_004214449.1 4048332 R 741091 CDS YP_004214450.1 322834423 10214763 complement(4049651..4050733) 1 NC_015061.1 KEGG: spe:Spro_0758 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; phospho-N-acetylmuramoyl-pentapeptide- transferase 4050733 10214763 Rahaq_3734 Rahnella sp. Y9602 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_004214450.1 4049651 R 741091 CDS YP_004214451.1 322834424 10214764 complement(4050727..4052088) 1 NC_015061.1 KEGG: spe:Spro_0757 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase 4052088 10214764 Rahaq_3735 Rahnella sp. Y9602 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase YP_004214451.1 4050727 R 741091 CDS YP_004214452.1 322834425 10214765 complement(4052085..4053572) 1 NC_015061.1 KEGG: pct:PC1_3597 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramyl tripeptide synthetase 4053572 10214765 Rahaq_3736 Rahnella sp. Y9602 UDP-N-acetylmuramyl tripeptide synthetase YP_004214452.1 4052085 R 741091 CDS YP_004214453.1 322834426 10214766 complement(4053559..4055322) 1 NC_015061.1 KEGG: spe:Spro_0755 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; peptidoglycan glycosyltransferase 4055322 10214766 Rahaq_3737 Rahnella sp. Y9602 peptidoglycan glycosyltransferase YP_004214453.1 4053559 R 741091 CDS YP_004214454.1 322834427 10214767 complement(4055350..4055670) 1 NC_015061.1 KEGG: pam:PANA_0712 FtsL; TIGRFAM: cell division protein FtsL; PFAM: cell division protein FtsL; cell division protein FtsL 4055670 10214767 Rahaq_3738 Rahnella sp. Y9602 cell division protein FtsL YP_004214454.1 4055350 R 741091 CDS YP_004214455.1 322834428 10214768 complement(4055667..4056608) 1 NC_015061.1 KEGG: yen:YE0664 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; S-adenosyl-methyltransferase MraW 4056608 10214768 Rahaq_3739 Rahnella sp. Y9602 S-adenosyl-methyltransferase MraW YP_004214455.1 4055667 R 741091 CDS YP_004214456.1 322834429 10214769 complement(4056611..4057069) 1 NC_015061.1 KEGG: spe:Spro_0752 cell division protein MraZ; TIGRFAM: MraZ protein; PFAM: MraZ domain; MraZ protein 4057069 10214769 Rahaq_3740 Rahnella sp. Y9602 MraZ protein YP_004214456.1 4056611 R 741091 CDS YP_004214457.1 322834430 10214770 complement(4057778..4058782) 1 NC_015061.1 TIGRFAM: D-fructose-responsive transcription factor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE0661 DNA-binding transcriptional regulator FruR; SMART: regulatory protein LacI; LacI family transcriptional regulator 4058782 10214770 Rahaq_3741 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004214457.1 4057778 R 741091 CDS YP_004214458.1 322834431 10214771 complement(4058949..4059440) 1 NC_015061.1 TIGRFAM: acetolactate synthase, small subunit; KEGG: spe:Spro_0749 acetolactate synthase 3 regulatory subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein; acetolactate synthase small subunit 4059440 10214771 Rahaq_3742 Rahnella sp. Y9602 acetolactate synthase small subunit YP_004214458.1 4058949 R 741091 CDS YP_004214459.1 322834432 10214772 complement(4059443..4061161) 1 NC_015061.1 KEGG: spe:Spro_0748 acetolactate synthase 3 catalytic subunit; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; acetolactate synthase large subunit 4061161 10214772 Rahaq_3743 Rahnella sp. Y9602 acetolactate synthase large subunit YP_004214459.1 4059443 R 741091 CDS YP_004214460.1 322834433 10214773 complement(4061589..4063385) 1 NC_015061.1 PFAM: AMP-dependent synthetase and ligase; KEGG: etr:ETAE_0624 AMP-binding enzyme-family protein; AMP-dependent synthetase/ligase 4063385 10214773 Rahaq_3744 Rahnella sp. Y9602 AMP-dependent synthetase/ligase YP_004214460.1 4061589 R 741091 CDS YP_004214461.1 322834434 10214774 complement(4063675..4064622) 1 NC_015061.1 PFAM: regulatory protein LysR; KEGG: hde:HDEF_1793 leucine transcriptional activator; LysR family transcriptional regulator 4064622 10214774 Rahaq_3745 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004214461.1 4063675 R 741091 CDS YP_004214462.1 322834435 10214775 4065361..4066950 1 NC_015061.1 KEGG: spe:Spro_0745 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein; 2-isopropylmalate synthase 4066950 10214775 Rahaq_3746 Rahnella sp. Y9602 2-isopropylmalate synthase YP_004214462.1 4065361 D 741091 CDS YP_004214463.1 322834436 10214776 4066953..4068044 1 NC_015061.1 TIGRFAM: 3-isopropylmalate dehydrogenase; KEGG: ypy:YPK_3536 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 4068044 10214776 Rahaq_3747 Rahnella sp. Y9602 3-isopropylmalate dehydrogenase YP_004214463.1 4066953 D 741091 CDS YP_004214464.1 322834437 10214777 4068046..4069446 1 NC_015061.1 KEGG: pct:PC1_3609 isopropylmalate isomerase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain-containing protein; 3-isopropylmalate dehydratase large subunit 4069446 10214777 Rahaq_3748 Rahnella sp. Y9602 3-isopropylmalate dehydratase large subunit YP_004214464.1 4068046 D 741091 CDS YP_004214465.1 322834438 10214778 4069457..4070059 1 NC_015061.1 KEGG: spe:Spro_0742 isopropylmalate isomerase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain-containing protein; 3-isopropylmalate dehydratase small subunit 4070059 10214778 Rahaq_3749 Rahnella sp. Y9602 3-isopropylmalate dehydratase small subunit YP_004214465.1 4069457 D 741091 CDS YP_004214466.1 322834439 10214779 complement(4070343..4071035) 1 NC_015061.1 KEGG: dmo:Dmoj_GI20120 GI20120 gene product from transcript GI20120-RA; hypothetical protein 4071035 10214779 Rahaq_3750 Rahnella sp. Y9602 hypothetical protein YP_004214466.1 4070343 R 741091 CDS YP_004214467.1 322834440 10214780 complement(4071263..4072426) 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: ebi:EbC_07030 sugar efflux transporter; major facilitator superfamily protein 4072426 10214780 Rahaq_3751 Rahnella sp. Y9602 major facilitator superfamily protein YP_004214467.1 4071263 R 741091 CDS YP_004214468.1 322834441 10214781 complement(4072587..4072772) 1 NC_015061.1 KEGG: spe:Spro_0739 hypothetical protein; hypothetical protein 4072772 10214781 Rahaq_3752 Rahnella sp. Y9602 hypothetical protein YP_004214468.1 4072587 R 741091 CDS YP_004214469.1 322834442 10214782 4072875..4074536 1 NC_015061.1 PFAM: extracellular solute-binding protein family 5; KEGG: spe:Spro_0738 transcriptional regulator SgrR; family 5 extracellular solute-binding protein 4074536 10214782 Rahaq_3753 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004214469.1 4072875 D 741091 CDS YP_004214470.1 322834443 10214783 4074750..4075733 1 NC_015061.1 KEGG: pam:PANA_0694 TbpA; TIGRFAM: thiamine ABC transporter periplasmic binding protein; ABC transporter periplasmic binding protein, thiB subfamily; PFAM: extracellular solute-binding protein family 1; thiamine ABC transporter periplasmic binding protein 4075733 10214783 Rahaq_3754 Rahnella sp. Y9602 thiamine ABC transporter periplasmic binding protein YP_004214470.1 4074750 D 741091 CDS YP_004214471.1 322834444 10214784 4075709..4077319 1 NC_015061.1 KEGG: spe:Spro_0736 thiamine transporter membrane protein; TIGRFAM: thiamine ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; thiamine ABC transporter inner membrane subunit 4077319 10214784 Rahaq_3755 Rahnella sp. Y9602 thiamine ABC transporter inner membrane subunit YP_004214471.1 4075709 D 741091 CDS YP_004214472.1 322834445 10214785 4077303..4078013 1 NC_015061.1 TIGRFAM: ABC transporter ATPase; PFAM: ABC transporter related; KEGG: yen:YE0640 thiamine transporter ATP-binding subunit; SMART: AAA ATPase; ABC transporter ATPase 4078013 10214785 Rahaq_3756 Rahnella sp. Y9602 ABC transporter ATPase YP_004214472.1 4077303 D 741091 CDS YP_004214473.1 322834446 10214786 complement(4078003..4078770) 1 NC_015061.1 PFAM: SNARE associated Golgi protein; KEGG: yen:YE0639 DedA family membrane protein; hypothetical protein 4078770 10214786 Rahaq_3757 Rahnella sp. Y9602 hypothetical protein YP_004214473.1 4078003 R 741091 CDS YP_004214474.1 322834447 10214787 4079072..4081414 1 NC_015061.1 KEGG: yen:YE0637 DNA polymerase II; PFAM: DNA polymerase B region; DNA polymerase B exonuclease; SMART: DNA-directed DNA polymerase B; DNA polymerase B region 4081414 10214787 Rahaq_3758 Rahnella sp. Y9602 DNA polymerase B region YP_004214474.1 4079072 D 741091 CDS YP_004214475.1 322834448 10214788 4081626..4084523 1 NC_015061.1 KEGG: yen:YE0636 ATP-dependent helicase HepA; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; SNF2-related protein 4084523 10214788 Rahaq_3759 Rahnella sp. Y9602 SNF2-related protein YP_004214475.1 4081626 D 741091 CDS YP_004214476.1 322834449 10214789 4084572..4085291 1 NC_015061.1 PFAM: pseudouridine synthase; KEGG: pct:PC1_3630 pseudouridine synthase; pseudouridine synthase 4085291 10214789 Rahaq_3760 Rahnella sp. Y9602 pseudouridine synthase YP_004214476.1 4084572 D 741091 CDS YP_004214477.1 322834450 10214790 4085498..4089274 1 NC_015061.1 TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; KEGG: ebi:EbC_39640 IgA1 protease precursor; PFAM: peptidase S6 IgA endopeptidase; Autotransporter beta- domain protein; outer membrane autotransporter barrel domain-containing protein 4089274 10214790 Rahaq_3761 Rahnella sp. Y9602 outer membrane autotransporter barrel domain-containing protein YP_004214477.1 4085498 D 741091 CDS YP_004214478.1 322834451 10214791 complement(4089343..4090164) 1 NC_015061.1 KEGG: eta:ETA_07280 Dna-J like membrane chaperone protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; molecular chaperone DnaJ 4090164 10214791 Rahaq_3762 Rahnella sp. Y9602 molecular chaperone DnaJ YP_004214478.1 4089343 R 741091 CDS YP_004214479.1 322834452 10214792 4090346..4092721 1 NC_015061.1 KEGG: yen:YE0633 organic solvent tolerance protein; manually curated; PFAM: Organic solvent tolerance protein; OstA family protein; organic solvent tolerance protein 4092721 10214792 Rahaq_3763 Rahnella sp. Y9602 organic solvent tolerance protein YP_004214479.1 4090346 D 741091 CDS YP_004214480.1 322834453 10214793 4092808..4094103 1 NC_015061.1 PFAM: SurA domain; PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: spe:Spro_0726 peptidyl-prolyl cis-trans isomerase SurA; SurA domain-containing protein 4094103 10214793 Rahaq_3764 Rahnella sp. Y9602 SurA domain-containing protein YP_004214480.1 4092808 D 741091 CDS YP_004214481.1 322834454 10214794 4094093..4095100 1 NC_015061.1 TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: ypb:YPTS_0657 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 4095100 10214794 Rahaq_3765 Rahnella sp. Y9602 4-hydroxythreonine-4-phosphate dehydrogenase YP_004214481.1 4094093 D 741091 CDS YP_004214482.1 322834455 10214795 4095106..4095933 1 NC_015061.1 TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: spe:Spro_0724 dimethyladenosine transferase; SMART: Ribosomal RNA adenine methylase transferase-like; dimethyladenosine transferase 4095933 10214795 Rahaq_3766 Rahnella sp. Y9602 dimethyladenosine transferase YP_004214482.1 4095106 D 741091 CDS YP_004214483.1 322834456 10214796 4095938..4096315 1 NC_015061.1 PFAM: ApaG domain protein; KEGG: spe:Spro_0723 ApaG protein; ApaG protein 4096315 10214796 Rahaq_3767 Rahnella sp. Y9602 ApaG protein YP_004214483.1 4095938 D 741091 CDS YP_004214484.1 322834457 10214797 4096321..4097175 1 NC_015061.1 KEGG: yen:YE0628 diadenosine tetraphosphatase; TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical); PFAM: metallophosphoesterase; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 4097175 10214797 Rahaq_3768 Rahnella sp. Y9602 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YP_004214484.1 4096321 D 741091 CDS YP_004214485.1 322834458 10214798 complement(4097413..4097898) 1 NC_015061.1 KEGG: ddc:Dd586_3577 dihydrofolate reductase; PFAM: dihydrofolate reductase region; Dihydrofolate reductase 4097898 10214798 Rahaq_3769 Rahnella sp. Y9602 Dihydrofolate reductase YP_004214485.1 4097413 R 741091 CDS YP_004214486.1 322834459 10214799 complement(4098168..4098632) 1 NC_015061.1 KEGG: ypb:YPTS_0651 hypothetical protein; hypothetical protein 4098632 10214799 Rahaq_3770 Rahnella sp. Y9602 hypothetical protein YP_004214486.1 4098168 R 741091 CDS YP_004214487.1 322834460 10214800 complement(4098629..4099438) 1 NC_015061.1 PFAM: protein of unknown function DUF1212; KEGG: ypb:YPTS_0650 hypothetical protein; hypothetical protein 4099438 10214800 Rahaq_3771 Rahnella sp. Y9602 hypothetical protein YP_004214487.1 4098629 R 741091 CDS YP_004214488.1 322834461 10214801 4099544..4100158 1 NC_015061.1 PFAM: lysine exporter protein (LYSE/YGGA); KEGG: spe:Spro_0717 lysine exporter protein LysE/YggA; lysine exporter protein LysE/YggA 4100158 10214801 Rahaq_3772 Rahnella sp. Y9602 lysine exporter protein LysE/YggA YP_004214488.1 4099544 D 741091 CDS YP_004214489.1 322834462 10214802 complement(4100214..4102067) 1 NC_015061.1 KEGG: spe:Spro_0716 glutathione-regulated potassium-efflux system protein KefC; TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; potassium efflux system protein 4102067 10214802 Rahaq_3773 Rahnella sp. Y9602 potassium efflux system protein YP_004214489.1 4100214 R 741091 CDS YP_004214490.1 322834463 10214803 complement(4102060..4102614) 1 NC_015061.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: spe:Spro_0715 glutathione-regulated potassium-efflux system ancillary protein KefF; NAD(P)H dehydrogenase (quinone) 4102614 10214803 Rahaq_3774 Rahnella sp. Y9602 NAD(P)H dehydrogenase (quinone) YP_004214490.1 4102060 R 741091 CDS YP_004214491.1 322834464 10214804 complement(4102733..4105324) 1 NC_015061.1 KEGG: she:Shewmr4_2805 glycosyl hydrolase family chitinase; PFAM: glycoside hydrolase family 18; Chitinase A domain protein; PKD domain containing protein; Carbohydrate-binding family V/XII; SMART: chitinase II; PKD domain containing protein; Carbohydrate-binding family V/XII; glycoside hydrolase 4105324 10214804 Rahaq_3775 Rahnella sp. Y9602 glycoside hydrolase YP_004214491.1 4102733 R 741091 CDS YP_004214492.1 322834465 10214805 complement(4105660..4108884) 1 NC_015061.1 KEGG: yen:YE0622 carbamoyl phosphate synthase large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; carbamoyl-phosphate synthase large subunit 4108884 10214805 Rahaq_3776 Rahnella sp. Y9602 carbamoyl-phosphate synthase large subunit YP_004214492.1 4105660 R 741091 CDS YP_004214493.1 322834466 10214806 complement(4108901..4110052) 1 NC_015061.1 KEGG: spe:Spro_0713 carbamoyl phosphate synthase small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; carbamoyl-phosphate synthase small subunit 4110052 10214806 Rahaq_3777 Rahnella sp. Y9602 carbamoyl-phosphate synthase small subunit YP_004214493.1 4108901 R 741091 CDS YP_004214494.1 322834467 10214807 complement(4110530..4111351) 1 NC_015061.1 TIGRFAM: dihydrodipicolinate reductase; KEGG: pct:PC1_3649 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase 4111351 10214807 Rahaq_3778 Rahnella sp. Y9602 dihydrodipicolinate reductase YP_004214494.1 4110530 R 741091 CDS YP_004214495.1 322834468 10214808 4112041..4113186 1 NC_015061.1 KEGG: ebi:EbC_38880 outer membrane protein; outer membrane protein 4113186 10214808 Rahaq_3779 Rahnella sp. Y9602 outer membrane protein YP_004214495.1 4112041 D 741091 CDS YP_004214496.1 322834469 10214809 4113347..4114222 1 NC_015061.1 PFAM: SMP-30/gluconolaconase/LRE-like region-containing protein; KEGG: ctu:Ctu_06610 hypothetical protein; SMP-30/gluconolaconase/LRE-like region-containing protein 4114222 10214809 Rahaq_3780 Rahnella sp. Y9602 SMP-30/gluconolaconase/LRE-like region-containing protein YP_004214496.1 4113347 D 741091 CDS YP_004214497.1 322834470 10214810 complement(4114289..4115242) 1 NC_015061.1 TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: spe:Spro_0701 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PFAM: LytB protein; hydroxymethylbutenyl pyrophosphate reductase 4115242 10214810 Rahaq_3781 Rahnella sp. Y9602 hydroxymethylbutenyl pyrophosphate reductase YP_004214497.1 4114289 R 741091 CDS YP_004214498.1 322834471 10214811 complement(4115223..4115693) 1 NC_015061.1 KEGG: spe:Spro_0700 peptidylprolyl isomerase FKBP-type; PFAM: peptidylprolyl isomerase FKBP-type; Peptidylprolyl isomerase 4115693 10214811 Rahaq_3782 Rahnella sp. Y9602 Peptidylprolyl isomerase YP_004214498.1 4115223 R 741091 CDS YP_004214499.1 322834472 10214812 complement(4115699..4116205) 1 NC_015061.1 TIGRFAM: lipoprotein signal peptidase; KEGG: spe:Spro_0699 lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; lipoprotein signal peptidase 4116205 10214812 Rahaq_3783 Rahnella sp. Y9602 lipoprotein signal peptidase YP_004214499.1 4115699 R 741091 CDS YP_004214500.1 322834473 10214813 complement(4116205..4119021) 1 NC_015061.1 KEGG: ypb:YPTS_0641 isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 4119021 10214813 Rahaq_3784 Rahnella sp. Y9602 isoleucyl-tRNA synthetase YP_004214500.1 4116205 R 741091 CDS YP_004214501.1 322834474 10214814 complement(4119083..4120021) 1 NC_015061.1 TIGRFAM: riboflavin biosynthesis protein RibF; KEGG: spe:Spro_0697 bifunctional riboflavin kinase/FMN adenylyltransferase; PFAM: FAD synthetase; Riboflavin kinase; riboflavin biosynthesis protein RibF 4120021 10214814 Rahaq_3785 Rahnella sp. Y9602 riboflavin biosynthesis protein RibF YP_004214501.1 4119083 R 741091 CDS YP_004214502.1 322834475 10214815 4120461..4120724 1 NC_015061.1 KEGG: ypb:YPTS_0639 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20; 30S ribosomal protein S20 4120724 10214815 Rahaq_3786 Rahnella sp. Y9602 30S ribosomal protein S20 YP_004214502.1 4120461 D 741091 CDS YP_004214503.1 322834476 10214816 complement(4120807..4121694) 1 NC_015061.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: spe:Spro_0695 transcriptional activator NhaR; LysR family transcriptional regulator 4121694 10214816 Rahaq_3787 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004214503.1 4120807 R 741091 CDS YP_004214504.1 322834477 10214817 complement(4121734..4122909) 1 NC_015061.1 KEGG: yen:YE0611 pH-dependent sodium/proton antiporter; TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA; Na+/H+ antiporter NhaA 4122909 10214817 Rahaq_3788 Rahnella sp. Y9602 Na+/H+ antiporter NhaA YP_004214504.1 4121734 R 741091 CDS YP_004214505.1 322834478 10214818 complement(4123139..4124272) 1 NC_015061.1 TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; DnaJ central domain protein; heat shock protein DnaJ domain protein; KEGG: kva:Kvar_4379 chaperone protein DnaJ; SMART: heat shock protein DnaJ domain protein; molecular chaperone DnaJ 4124272 10214818 Rahaq_3789 Rahnella sp. Y9602 molecular chaperone DnaJ YP_004214505.1 4123139 R 741091 CDS YP_004214506.1 322834479 10214819 complement(4124372..4126273) 1 NC_015061.1 TIGRFAM: chaperone protein DnaK; KEGG: ypi:YpsIP31758_3466 molecular chaperone DnaK; PFAM: Heat shock protein 70; molecular chaperone DnaK 4126273 10214819 Rahaq_3790 Rahnella sp. Y9602 molecular chaperone DnaK YP_004214506.1 4124372 R 741091 CDS YP_004214507.1 322834480 10214820 4126593..4127192 1 NC_015061.1 PFAM: GPR1/FUN34/yaaH family protein; KEGG: dda:Dd703_0580 hypothetical protein; GPR1/FUN34/yaaH family protein 4127192 10214820 Rahaq_3791 Rahnella sp. Y9602 GPR1/FUN34/yaaH family protein YP_004214507.1 4126593 D 741091 CDS YP_004214508.1 322834481 10214821 complement(4127254..4128576) 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_0690 major facilitator transporter; major facilitator superfamily protein 4128576 10214821 Rahaq_3792 Rahnella sp. Y9602 major facilitator superfamily protein YP_004214508.1 4127254 R 741091 CDS YP_004214509.1 322834482 10214822 complement(4128719..4129306) 1 NC_015061.1 KEGG: esa:ESA_03329 molybdenum cofactor biosynthesis protein MogA; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; molybdenum cofactor synthesis domain-containing protein 4129306 10214822 Rahaq_3793 Rahnella sp. Y9602 molybdenum cofactor synthesis domain-containing protein YP_004214509.1 4128719 R 741091 CDS YP_004214510.1 322834483 10214823 complement(4129433..4130386) 1 NC_015061.1 KEGG: yen:YE0604 transaldolase B; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase 4130386 10214823 Rahaq_3794 Rahnella sp. Y9602 transaldolase YP_004214510.1 4129433 R 741091 CDS YP_004214511.1 322834484 10214824 4130662..4132089 1 NC_015061.1 KEGG: spe:Spro_0687 amino acid carrier protein; TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; amino acid carrier protein 4132089 10214824 Rahaq_3795 Rahnella sp. Y9602 amino acid carrier protein YP_004214511.1 4130662 D 741091 CDS YP_004214512.1 322834485 10214825 4132201..4132974 1 NC_015061.1 PFAM: protein of unknown function DUF328; KEGG: spe:Spro_0686 hypothetical protein; hypothetical protein 4132974 10214825 Rahaq_3796 Rahnella sp. Y9602 hypothetical protein YP_004214512.1 4132201 D 741091 CDS YP_004214513.1 322834486 10214826 complement(4133042..4134331) 1 NC_015061.1 TIGRFAM: threonine synthase; KEGG: ypb:YPTS_0628 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein subunit beta; threonine synthase 4134331 10214826 Rahaq_3797 Rahnella sp. Y9602 threonine synthase YP_004214513.1 4133042 R 741091 CDS YP_004214514.1 322834487 10214827 complement(4134356..4135285) 1 NC_015061.1 KEGG: spe:Spro_0684 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein; homoserine kinase 4135285 10214827 Rahaq_3798 Rahnella sp. Y9602 homoserine kinase YP_004214514.1 4134356 R 741091 CDS YP_004214515.1 322834488 10214828 complement(4135287..4137746) 1 NC_015061.1 KEGG: spe:Spro_0683 bifunctional aspartokinase I/homoserine dehydrogenase I; TIGRFAM: aspartate kinase; PFAM: homoserine dehydrogenase; aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding; aspartate kinase 4137746 10214828 Rahaq_3799 Rahnella sp. Y9602 aspartate kinase YP_004214515.1 4135287 R 741091 CDS YP_004214516.1 322834489 10214829 complement(4138121..4138807) 1 NC_015061.1 KEGG: spe:Spro_0682 RNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA methyltransferase, TrmH family, group 1 4138807 10214829 Rahaq_3800 Rahnella sp. Y9602 RNA methyltransferase, TrmH family, group 1 YP_004214516.1 4138121 R 741091 CDS YP_004214517.1 322834490 10214830 4139474..4140190 1 NC_015061.1 KEGG: spe:Spro_0681 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator 4140190 10214830 Rahaq_3801 Rahnella sp. Y9602 transcriptional regulator YP_004214517.1 4139474 D 741091 CDS YP_004214518.1 322834491 10214831 complement(4140282..4140764) 1 NC_015061.1 PFAM: CreA family protein; KEGG: spe:Spro_0680 hypothetical protein; CreA family protein 4140764 10214831 Rahaq_3802 Rahnella sp. Y9602 CreA family protein YP_004214518.1 4140282 R 741091 CDS YP_004214519.1 322834492 10214832 4140973..4141836 1 NC_015061.1 KEGG: spe:Spro_0679 AraC family transcriptional regulator; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 4141836 10214832 Rahaq_3803 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004214519.1 4140973 D 741091 CDS YP_004214520.1 322834493 10214833 complement(4141849..4142496) 1 NC_015061.1 PFAM: Phosphoglycerate mutase; KEGG: spe:Spro_0678 phosphoglycerate mutase; phosphoglycerate mutase 4142496 10214833 Rahaq_3804 Rahnella sp. Y9602 phosphoglycerate mutase YP_004214520.1 4141849 R 741091 CDS YP_004214521.1 322834494 10214834 4142548..4143081 1 NC_015061.1 PFAM: protein of unknown function DUF84; KEGG: pwa:Pecwa_3869 NTPase; hypothetical protein 4143081 10214834 Rahaq_3805 Rahnella sp. Y9602 hypothetical protein YP_004214521.1 4142548 D 741091 CDS YP_004214522.1 322834495 10214835 complement(4143105..4143440) 1 NC_015061.1 KEGG: spe:Spro_0676 Trp operon repressor; TIGRFAM: trp operon repressor; PFAM: Trp repressor; Trp operon repressor 4143440 10214835 Rahaq_3806 Rahnella sp. Y9602 Trp operon repressor YP_004214522.1 4143105 R 741091 CDS YP_004214523.1 322834496 10214836 complement(4143497..4145425) 1 NC_015061.1 PFAM: lytic transglycosylase catalytic; KEGG: spe:Spro_0675 lytic murein transglycosylase; lytic transglycosylase 4145425 10214836 Rahaq_3807 Rahnella sp. Y9602 lytic transglycosylase YP_004214523.1 4143497 R 741091 CDS YP_004214524.1 322834497 10214837 4146014..4148752 1 NC_015061.1 KEGG: ypb:YPTS_0616 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; P-type HAD superfamily ATPase 4148752 10214837 Rahaq_3808 Rahnella sp. Y9602 P-type HAD superfamily ATPase YP_004214524.1 4146014 D 741091 CDS YP_004214525.1 322834498 10214838 4149076..4149756 1 NC_015061.1 KEGG: spe:Spro_3050 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; LuxR family transcriptional regulator 4149756 10214838 Rahaq_3809 Rahnella sp. Y9602 LuxR family transcriptional regulator YP_004214525.1 4149076 D 741091 CDS YP_004214526.1 322834499 10214839 4149867..4151627 1 NC_015061.1 KEGG: ebi:EbC_06190 ATP-binding component of a transport system; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 4151627 10214839 Rahaq_3810 Rahnella sp. Y9602 ABC transporter YP_004214526.1 4149867 D 741091 CDS YP_004214527.1 322834500 10214840 complement(4151692..4152600) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA3903 LysR family transcriptional activator; LysR family transcriptional regulator 4152600 10214840 Rahaq_3811 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004214527.1 4151692 R 741091 CDS YP_004214528.1 322834501 10214841 4152701..4153702 1 NC_015061.1 KEGG: spe:Spro_0669 zinc-binding alcohol dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; zinc-binding alcohol dehydrogenase family protein 4153702 10214841 Rahaq_3812 Rahnella sp. Y9602 zinc-binding alcohol dehydrogenase family protein YP_004214528.1 4152701 D 741091 CDS YP_004214529.1 322834502 10214842 complement(4153772..4154629) 1 NC_015061.1 KEGG: cko:CKO_03255 hypothetical protein; hypothetical protein 4154629 10214842 Rahaq_3813 Rahnella sp. Y9602 hypothetical protein YP_004214529.1 4153772 R 741091 CDS YP_004214530.1 322834503 10214843 complement(4154647..4156185) 1 NC_015061.1 KEGG: spq:SPAB_00196 hypothetical protein; hypothetical protein 4156185 10214843 Rahaq_3814 Rahnella sp. Y9602 hypothetical protein YP_004214530.1 4154647 R 741091 CDS YP_004214531.1 322834504 10214844 complement(4156532..4157791) 1 NC_015061.1 TIGRFAM: nicotinamide-nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: helix-turn-helix domain protein; KEGG: ypi:YpsIP31758_3491 nicotinamide-nucleotide adenylyltransferase; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 4157791 10214844 Rahaq_3815 Rahnella sp. Y9602 XRE family transcriptional regulator YP_004214531.1 4156532 R 741091 CDS YP_004214532.1 322834505 10214845 complement(4157864..4159246) 1 NC_015061.1 KEGG: eta:ETA_06730 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: AAA ATPase; DNA repair protein RadA 4159246 10214845 Rahaq_3816 Rahnella sp. Y9602 DNA repair protein RadA YP_004214532.1 4157864 R 741091 CDS YP_004214533.1 322834506 10214846 complement(4159267..4160232) 1 NC_015061.1 TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: spe:Spro_0666 phosphoserine phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoserine phosphatase SerB 4160232 10214846 Rahaq_3817 Rahnella sp. Y9602 phosphoserine phosphatase SerB YP_004214533.1 4159267 R 741091 CDS YP_004214534.1 322834507 10214847 4160467..4161255 1 NC_015061.1 PFAM: Virulence factor, haemolysin regulator; KEGG: yps:YPTB0585 hypothetical protein; Virulence factor, hemolysin regulator 4161255 10214847 Rahaq_3818 Rahnella sp. Y9602 Virulence factor, hemolysin regulator YP_004214534.1 4160467 D 741091 CDS YP_004214535.1 322834508 10214848 complement(4161257..4162603) 1 NC_015061.1 PFAM: HipA domain protein; KEGG: spe:Spro_0664 hypothetical protein; HipA domain-containing protein 4162603 10214848 Rahaq_3819 Rahnella sp. Y9602 HipA domain-containing protein YP_004214535.1 4161257 R 741091 CDS YP_004214536.1 322834509 10214849 complement(4162777..4163496) 1 NC_015061.1 KEGG: ctu:Ctu_05990 purine nucleoside phosphorylase DeoD-type; TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; purine nucleoside phosphorylase 4163496 10214849 Rahaq_3820 Rahnella sp. Y9602 purine nucleoside phosphorylase YP_004214536.1 4162777 R 741091 CDS YP_004214537.1 322834510 10214850 complement(4163580..4164803) 1 NC_015061.1 TIGRFAM: phosphopentomutase; KEGG: ctu:Ctu_05980 phosphopentomutase; PFAM: metalloenzyme domain protein; phosphopentomutase 4164803 10214850 Rahaq_3821 Rahnella sp. Y9602 phosphopentomutase YP_004214537.1 4163580 R 741091 CDS YP_004214538.1 322834511 10214851 complement(4164892..4166220) 1 NC_015061.1 TIGRFAM: thymidine phosphorylase; pyrimidine-nucleoside phosphorylase; KEGG: spe:Spro_0661 thymidine phosphorylase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; Pyrimidine nucleoside phosphorylase domain; thymidine phosphorylase 4166220 10214851 Rahaq_3822 Rahnella sp. Y9602 thymidine phosphorylase YP_004214538.1 4164892 R 741091 CDS YP_004214539.1 322834512 10214852 complement(4166311..4167090) 1 NC_015061.1 TIGRFAM: deoxyribose-phosphate aldolase; KEGG: spe:Spro_0660 deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; deoxyribose-phosphate aldolase 4167090 10214852 Rahaq_3823 Rahnella sp. Y9602 deoxyribose-phosphate aldolase YP_004214539.1 4166311 R 741091 CDS YP_004214540.1 322834513 10214853 4167146..4167613 1 NC_015061.1 KEGG: ptm:GSPATT00019616001 hypothetical protein; hypothetical protein 4167613 10214853 Rahaq_3824 Rahnella sp. Y9602 hypothetical protein YP_004214540.1 4167146 D 741091 CDS YP_004214541.1 322834514 10214854 complement(4167639..4168424) 1 NC_015061.1 PFAM: TatD-related deoxyribonuclease; KEGG: spe:Spro_0657 TatD-related deoxyribonuclease; TatD-related deoxyribonuclease 4168424 10214854 Rahaq_3825 Rahnella sp. Y9602 TatD-related deoxyribonuclease YP_004214541.1 4167639 R 741091 CDS YP_004214542.1 322834515 10214855 complement(4168421..4169671) 1 NC_015061.1 PFAM: Patatin; KEGG: yen:YE0567 hypothetical protein; patatin 4169671 10214855 Rahaq_3826 Rahnella sp. Y9602 patatin YP_004214542.1 4168421 R 741091 CDS YP_004214543.1 322834516 10214856 complement(4169867..4170028) 1 NC_015061.1 PFAM: protein of unknown function DUF1328; KEGG: ypb:YPTS_0599 hypothetical protein; hypothetical protein 4170028 10214856 Rahaq_3827 Rahnella sp. Y9602 hypothetical protein YP_004214543.1 4169867 R 741091 CDS YP_004214544.1 322834517 10214857 complement(4170348..4170941) 1 NC_015061.1 KEGG: spe:Spro_0653 periplasmic protein; PFAM: transport-associated; SMART: Transport-associated and nodulation region; transport-associated protein 4170941 10214857 Rahaq_3828 Rahnella sp. Y9602 transport-associated protein YP_004214544.1 4170348 R 741091 CDS YP_004214545.1 322834518 10214858 complement(4171365..4173920) 1 NC_015061.1 PFAM: Carbohydrate-binding family V/XII; PKD domain containing protein; KEGG: cro:ROD_44811 polysaccharide degrading enzyme; SMART: Carbohydrate-binding family V/XII; PKD domain containing protein; lysozyme 4173920 10214858 Rahaq_3829 Rahnella sp. Y9602 lysozyme YP_004214545.1 4171365 R 741091 CDS YP_004214546.1 322834519 10214859 complement(4174333..4175922) 1 NC_015061.1 KEGG: spe:Spro_0652 peptide chain release factor 3; TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; peptide chain release factor 3 4175922 10214859 Rahaq_3830 Rahnella sp. Y9602 peptide chain release factor 3 YP_004214546.1 4174333 R 741091 CDS YP_004214547.1 322834520 10214860 complement(4176087..4177346) 1 NC_015061.1 KEGG: sbn:Sbal195_3381 HipA domain-containing protein; TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; HipA N-terminal domain-containing protein 4177346 10214860 Rahaq_3831 Rahnella sp. Y9602 HipA N-terminal domain-containing protein YP_004214547.1 4176087 R 741091 CDS YP_004214548.1 322834521 10214861 complement(4177349..4177672) 1 NC_015061.1 KEGG: sbn:Sbal195_3478 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 4177672 10214861 Rahaq_3832 Rahnella sp. Y9602 helix-turn-helix domain-containing protein YP_004214548.1 4177349 R 741091 CDS YP_004214549.1 322834522 10214862 complement(4177904..4178347) 1 NC_015061.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; KEGG: yen:YE0563 ribosomal-protein-alanine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; ribosomal-protein-alanine acetyltransferase 4178347 10214862 Rahaq_3833 Rahnella sp. Y9602 ribosomal-protein-alanine acetyltransferase YP_004214549.1 4177904 R 741091 CDS YP_004214550.1 322834523 10214863 complement(4178316..4178729) 1 NC_015061.1 PFAM: DNA polymerase III psi subunit; KEGG: ypb:YPTS_0595 DNA polymerase III subunit psi; DNA polymerase III psi subunit 4178729 10214863 Rahaq_3834 Rahnella sp. Y9602 DNA polymerase III psi subunit YP_004214550.1 4178316 R 741091 CDS YP_004214551.1 322834524 10214864 4178869..4179915 1 NC_015061.1 KEGG: yen:YE0561 16S ribosomal RNA m2G1207 methyltransferase; PFAM: methyltransferase small; methyltransferase small domain protein; rRNA (guanine-N(2)-)-methyltransferase 4179915 10214864 Rahaq_3835 Rahnella sp. Y9602 rRNA (guanine-N(2)-)-methyltransferase YP_004214551.1 4178869 D 741091 CDS YP_004214552.1 322834525 10214865 complement(4179920..4180912) 1 NC_015061.1 PFAM: aldo/keto reductase; KEGG: eca:ECA0736 aldo/keto reductase; aldo/keto reductase 4180912 10214865 Rahaq_3836 Rahnella sp. Y9602 aldo/keto reductase YP_004214552.1 4179920 R 741091 CDS YP_004214553.1 322834526 10214866 4181038..4181976 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_0647 LysR family transcriptional regulator; LysR family transcriptional regulator 4181976 10214866 Rahaq_3837 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004214553.1 4181038 D 741091 CDS YP_004214554.1 322834527 10214870 complement(4182626..4182910) 1 NC_015061.1 PFAM: protein of unknown function DUF1435; KEGG: spe:Spro_0646 hypothetical protein; hypothetical protein 4182910 10214870 Rahaq_3838 Rahnella sp. Y9602 hypothetical protein YP_004214554.1 4182626 R 741091 CDS YP_004214555.1 322834528 10214871 4183214..4184308 1 NC_015061.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: yen:YE0557 HmsT protein; SMART: GGDEF domain containing protein; diguanylate cyclase 4184308 10214871 Rahaq_3839 Rahnella sp. Y9602 diguanylate cyclase YP_004214555.1 4183214 D 741091 CDS YP_004214556.1 322834529 10214872 4184909..4185943 1 NC_015061.1 PFAM: RhaT l-rhamnose-proton symport 2; KEGG: eca:ECA0450 rhamnose-proton symporter; RhaT l-rhamnose-proton symport 2 4185943 10214872 Rahaq_3840 Rahnella sp. Y9602 RhaT l-rhamnose-proton symport 2 YP_004214556.1 4184909 D 741091 CDS YP_004214557.1 322834530 10214873 complement(4185972..4186844) 1 NC_015061.1 KEGG: ddc:Dd586_0467 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 4186844 10214873 Rahaq_3841 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004214557.1 4185972 R 741091 CDS YP_004214558.1 322834531 10214874 complement(4186928..4187755) 1 NC_015061.1 KEGG: pwa:Pecwa_0500 transcriptional activator RhaS; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 4187755 10214874 Rahaq_3842 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004214558.1 4186928 R 741091 CDS YP_004214559.1 322834532 10214875 4188096..4189580 1 NC_015061.1 KEGG: eca:ECA0440 rhamnulokinase; TIGRFAM: rhamnulokinase; PFAM: Carbohydrate kinase, FGGY-like; rhamnulokinase 4189580 10214875 Rahaq_3843 Rahnella sp. Y9602 rhamnulokinase YP_004214559.1 4188096 D 741091 CDS YP_004214560.1 322834533 10214876 4189577..4190833 1 NC_015061.1 TIGRFAM: L-rhamnose isomerase; KEGG: ses:SARI_03601 L-rhamnose isomerase; PFAM: L-rhamnose isomerase; L-rhamnose isomerase 4190833 10214876 Rahaq_3844 Rahnella sp. Y9602 L-rhamnose isomerase YP_004214560.1 4189577 D 741091 CDS YP_004214561.1 322834534 10214877 4190886..4191710 1 NC_015061.1 TIGRFAM: rhamnulose-1-phosphate aldolase; KEGG: pwa:Pecwa_0497 rhamnulose-1-phosphate aldolase; PFAM: class II aldolase/adducin family protein; rhamnulose-1-phosphate aldolase 4191710 10214877 Rahaq_3845 Rahnella sp. Y9602 rhamnulose-1-phosphate aldolase YP_004214561.1 4190886 D 741091 CDS YP_004214562.1 322834535 10214878 4191847..4192995 1 NC_015061.1 KEGG: enc:ECL_05075 lactaldehyde reductase; TIGRFAM: lactaldehyde reductase; PFAM: iron-containing alcohol dehydrogenase; lactaldehyde reductase 4192995 10214878 Rahaq_3846 Rahnella sp. Y9602 lactaldehyde reductase YP_004214562.1 4191847 D 741091 CDS YP_004214563.1 322834536 10214879 4193219..4193533 1 NC_015061.1 KEGG: pwa:Pecwa_0496 L-rhamnose 1-epimerase; TIGRFAM: L-rhamnose 1-epimerase; PFAM: protein of unknown function DUF718; L-rhamnose 1-epimerase 4193533 10214879 Rahaq_3847 Rahnella sp. Y9602 L-rhamnose 1-epimerase YP_004214563.1 4193219 D 741091 CDS YP_004214564.1 322834537 10214880 complement(4193508..4195682) 1 NC_015061.1 KEGG: spe:Spro_4234 hypothetical protein; PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 4195682 10214880 Rahaq_3848 Rahnella sp. Y9602 radical SAM protein YP_004214564.1 4193508 R 741091 CDS YP_004214565.1 322834538 10214881 4195942..4196673 1 NC_015061.1 KEGG: rso:RS02138 hypothetical protein; hypothetical protein 4196673 10214881 Rahaq_3849 Rahnella sp. Y9602 hypothetical protein YP_004214565.1 4195942 D 741091 CDS YP_004214566.1 322834539 10214882 complement(4196741..4198393) 1 NC_015061.1 TIGRFAM: dihydroxyacetone kinase; KEGG: ebi:EbC_03690 dihydroxyacetone kinase; PFAM: Dak kinase; Dak phosphatase; dihydroxyacetone kinase 4198393 10214882 Rahaq_3850 Rahnella sp. Y9602 dihydroxyacetone kinase YP_004214566.1 4196741 R 741091 CDS YP_004214567.1 322834540 10214883 complement(4198539..4199906) 1 NC_015061.1 TIGRFAM: L-serine dehydratase 1; KEGG: spe:Spro_1629 L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 4199906 10214883 Rahaq_3851 Rahnella sp. Y9602 L-serine dehydratase 1 YP_004214567.1 4198539 R 741091 CDS YP_004214568.1 322834541 10214884 complement(4200010..4201293) 1 NC_015061.1 TIGRFAM: serine transporter; KEGG: yen:YE1473 serine transporter; serine transporter 4201293 10214884 Rahaq_3852 Rahnella sp. Y9602 serine transporter YP_004214568.1 4200010 R 741091 CDS YP_004214569.1 322834542 10214885 4201881..4202468 1 NC_015061.1 KEGG: spe:Spro_0674 hypothetical protein; hypothetical protein 4202468 10214885 Rahaq_3853 Rahnella sp. Y9602 hypothetical protein YP_004214569.1 4201881 D 741091 CDS YP_004214570.1 322834543 10214886 4202471..4203751 1 NC_015061.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: spe:Spro_0673 diguanylate cyclase; SMART: GGDEF domain containing protein; diguanylate cyclase 4203751 10214886 Rahaq_3854 Rahnella sp. Y9602 diguanylate cyclase YP_004214570.1 4202471 D 741091 CDS YP_004214571.1 322834544 10214887 4203767..4204264 1 NC_015061.1 PFAM: OmpA/MotB domain protein; KEGG: spe:Spro_0672 OmpA/MotB domain-containing protein; OmpA/MotB domain-containing protein 4204264 10214887 Rahaq_3855 Rahnella sp. Y9602 OmpA/MotB domain-containing protein YP_004214571.1 4203767 D 741091 CDS YP_004214572.1 322834545 10214888 complement(4204266..4205138) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: yen:YE4015 transcriptional regulator; LysR family transcriptional regulator 4205138 10214888 Rahaq_3856 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004214572.1 4204266 R 741091 CDS YP_004214573.1 322834546 10214889 4205243..4206025 1 NC_015061.1 TIGRFAM: alpha-acetolactate decarboxylase; KEGG: yen:YE4016 alpha-acetolactate decarboxylase; PFAM: alpha-acetolactate decarboxylase; alpha-acetolactate decarboxylase 4206025 10214889 Rahaq_3857 Rahnella sp. Y9602 alpha-acetolactate decarboxylase YP_004214573.1 4205243 D 741091 CDS YP_004214574.1 322834547 10214890 4206053..4207729 1 NC_015061.1 KEGG: eta:ETA_00120 acetolactate synthase; TIGRFAM: acetolactate synthase, catabolic; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; acetolactate synthase, catabolic 4207729 10214890 Rahaq_3858 Rahnella sp. Y9602 acetolactate synthase, catabolic YP_004214574.1 4206053 D 741091 CDS YP_004214575.1 322834548 10214891 4207860..4209431 1 NC_015061.1 PFAM: ATPase associated with various cellular activities AAA_5; KEGG: sml:Smlt0496 hypothetical protein; ATPase AAA 4209431 10214891 Rahaq_3859 Rahnella sp. Y9602 ATPase AAA YP_004214575.1 4207860 D 741091 CDS YP_004214576.1 322834549 10214892 4209431..4210705 1 NC_015061.1 PFAM: 5-methylcytosine restriction system component-like protein; KEGG: ppf:Pput_4619 McrBC 5-methylcytosine restriction system component-like protein; 5-methylcytosine restriction system component-like protein 4210705 10214892 Rahaq_3860 Rahnella sp. Y9602 5-methylcytosine restriction system component-like protein YP_004214576.1 4209431 D 741091 CDS YP_004214577.1 322834550 10214893 4211040..4211261 1 NC_015061.1 KEGG: ddd:Dda3937_00946 prophage protein; hypothetical protein 4211261 10214893 Rahaq_3861 Rahnella sp. Y9602 hypothetical protein YP_004214577.1 4211040 D 741091 CDS YP_004214578.1 322834551 10214894 complement(4211328..4212464) 1 NC_015061.1 KEGG: spe:Spro_3398 outer membrane protein; outer membrane protein 4212464 10214894 Rahaq_3862 Rahnella sp. Y9602 outer membrane protein YP_004214578.1 4211328 R 741091 CDS YP_004214579.1 322834552 10214895 4213093..4213428 1 NC_015061.1 KEGG: pwa:Pecwa_0482 hypothetical protein; hypothetical protein 4213428 10214895 Rahaq_3863 Rahnella sp. Y9602 hypothetical protein YP_004214579.1 4213093 D 741091 CDS YP_004214580.1 322834553 10214896 complement(4213406..4214326) 1 NC_015061.1 KEGG: esa:ESA_02127 hypothetical protein; hypothetical protein 4214326 10214896 Rahaq_3864 Rahnella sp. Y9602 hypothetical protein YP_004214580.1 4213406 R 741091 CDS YP_004214581.1 322834554 10214898 4214776..4215915 1 NC_015061.1 PFAM: beta-lactamase; KEGG: yen:YE1402 beta-lactam binding protein AmpH; beta-lactamase 4215915 10214898 Rahaq_3865 Rahnella sp. Y9602 beta-lactamase YP_004214581.1 4214776 D 741091 CDS YP_004214582.1 322834555 10214899 complement(4216002..4217072) 1 NC_015061.1 PFAM: permease YjgP/YjgQ family protein; KEGG: spe:Spro_0564 permease YjgP/YjgQ family protein; YjgP/YjgQ family permease 4217072 10214899 Rahaq_3866 Rahnella sp. Y9602 YjgP/YjgQ family permease YP_004214582.1 4216002 R 741091 CDS YP_004214583.1 322834556 10214900 complement(4217072..4218166) 1 NC_015061.1 PFAM: permease YjgP/YjgQ family protein; KEGG: sgl:SG2108 transport protein; YjgP/YjgQ family permease 4218166 10214900 Rahaq_3867 Rahnella sp. Y9602 YjgP/YjgQ family permease YP_004214583.1 4217072 R 741091 CDS YP_004214584.1 322834557 10214901 4218445..4219956 1 NC_015061.1 KEGG: spe:Spro_0562 leucyl aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein; leucyl aminopeptidase 4219956 10214901 Rahaq_3868 Rahnella sp. Y9602 leucyl aminopeptidase YP_004214584.1 4218445 D 741091 CDS YP_004214585.1 322834558 10214902 4220072..4220557 1 NC_015061.1 KEGG: spe:Spro_0561 DNA polymerase III subunit chi; PFAM: DNA polymerase III chi subunit HolC; DNA-directed DNA polymerase 4220557 10214902 Rahaq_3869 Rahnella sp. Y9602 DNA-directed DNA polymerase YP_004214585.1 4220072 D 741091 CDS YP_004214586.1 322834559 10214903 4220550..4223405 1 NC_015061.1 KEGG: yen:YE0498 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase; valyl-tRNA synthetase 4223405 10214903 Rahaq_3870 Rahnella sp. Y9602 valyl-tRNA synthetase YP_004214586.1 4220550 D 741091 CDS YP_004214587.1 322834560 10214904 complement(4223495..4224511) 1 NC_015061.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cko:CKO_02556 hypothetical protein; LysR family transcriptional regulator 4224511 10214904 Rahaq_3871 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004214587.1 4223495 R 741091 CDS YP_004214588.1 322834561 10214905 complement(4225021..4225977) 1 NC_015061.1 PFAM: Fimbrial protein domain-containing protein; KEGG: kpu:KP1_0601 fimbrial adhesin precursor; fimbrial protein domain-containing protein 4225977 10214905 Rahaq_3872 Rahnella sp. Y9602 fimbrial protein domain-containing protein YP_004214588.1 4225021 R 741091 CDS YP_004214589.1 322834562 10214906 complement(4225992..4228607) 1 NC_015061.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: kpu:KP1_0600 long polar fimbrial outer membrane usher protein; fimbrial biogenesis outer membrane usher protein 4228607 10214906 Rahaq_3873 Rahnella sp. Y9602 fimbrial biogenesis outer membrane usher protein YP_004214589.1 4225992 R 741091 CDS YP_004214590.1 322834563 10214907 complement(4228655..4229344) 1 NC_015061.1 PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: yen:YE1113 fimbrial chaperone protein; Pili assembly chaperone, N-terminal protein 4229344 10214907 Rahaq_3874 Rahnella sp. Y9602 Pili assembly chaperone, N-terminal protein YP_004214590.1 4228655 R 741091 CDS YP_004214591.1 322834564 10214908 complement(4229407..4229916) 1 NC_015061.1 PFAM: Fimbrial protein domain-containing protein; KEGG: kpu:KP1_0597 fimbrial protein; fimbrial protein domain-containing protein 4229916 10214908 Rahaq_3875 Rahnella sp. Y9602 fimbrial protein domain-containing protein YP_004214591.1 4229407 R 741091 CDS YP_004214592.1 322834565 10214909 complement(4229971..4230522) 1 NC_015061.1 PFAM: Fimbrial protein domain-containing protein; KEGG: pay:PAU_02406 fimbrial subunit type 1; fimbrial protein domain-containing protein 4230522 10214909 Rahaq_3876 Rahnella sp. Y9602 fimbrial protein domain-containing protein YP_004214592.1 4229971 R 741091 CDS YP_004214593.1 322834566 10214910 complement(4231241..4232266) 1 NC_015061.1 PFAM: peptidase M48 Ste24p; KEGG: pct:PC1_0378 peptidase M48 Ste24p; peptidase M48 Ste24p 4232266 10214910 Rahaq_3877 Rahnella sp. Y9602 peptidase M48 Ste24p YP_004214593.1 4231241 R 741091 CDS YP_004214594.1 322834567 10214911 complement(4232270..4233460) 1 NC_015061.1 PFAM: protein of unknown function DUF898 transmembrane; KEGG: eca:ECA0387 hypothetical protein; hypothetical protein 4233460 10214911 Rahaq_3878 Rahnella sp. Y9602 hypothetical protein YP_004214594.1 4232270 R 741091 CDS YP_004214595.1 322834568 10214912 4233721..4234224 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ypy:YPK_3682 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4234224 10214912 Rahaq_3879 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004214595.1 4233721 D 741091 CDS YP_004214596.1 322834569 10214913 4234269..4235009 1 NC_015061.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: yen:YE1415 LacI family regulatory protein; RpiR family transcriptional regulator 4235009 10214913 Rahaq_3880 Rahnella sp. Y9602 RpiR family transcriptional regulator YP_004214596.1 4234269 D 741091 CDS YP_004214597.1 322834570 10214914 4235157..4236689 1 NC_015061.1 KEGG: yen:YE1416 PTS-system permease; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; Protein-N(pi)-phosphohistidine--sugar phosphotransferase 4236689 10214914 Rahaq_3881 Rahnella sp. Y9602 Protein-N(pi)-phosphohistidine--sugar phosphotransferase YP_004214597.1 4235157 D 741091 CDS YP_004214598.1 322834571 10214915 4236754..4238187 1 NC_015061.1 PFAM: glycoside hydrolase family 1; KEGG: yen:YE1417 6-phospho-beta-glucosidase; glycoside hydrolase 4238187 10214915 Rahaq_3882 Rahnella sp. Y9602 glycoside hydrolase YP_004214598.1 4236754 D 741091 CDS YP_004214599.1 322834572 10214916 complement(4238224..4238649) 1 NC_015061.1 PFAM: protein of unknown function DUF1260; KEGG: pwa:Pecwa_0426 hypothetical protein; hypothetical protein 4238649 10214916 Rahaq_3883 Rahnella sp. Y9602 hypothetical protein YP_004214599.1 4238224 R 741091 CDS YP_004214600.1 322834573 10214917 4238818..4239825 1 NC_015061.1 KEGG: pct:PC1_0374 ornithine carbamoyltransferase subunit I; TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; ornithine carbamoyltransferase 4239825 10214917 Rahaq_3884 Rahnella sp. Y9602 ornithine carbamoyltransferase YP_004214600.1 4238818 D 741091 CDS YP_004214601.1 322834574 10214918 4239986..4241788 1 NC_015061.1 KEGG: vvy:VVA1393 sucrose phosphorylase related protein; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; alpha amylase 4241788 10214918 Rahaq_3885 Rahnella sp. Y9602 alpha amylase YP_004214601.1 4239986 D 741091 CDS YP_004214602.1 322834575 10214919 complement(4241769..4242239) 1 NC_015061.1 PFAM: Conserved hypothetical protein CHP00022; KEGG: dze:Dd1591_3734 hypothetical protein; hypothetical protein 4242239 10214919 Rahaq_3886 Rahnella sp. Y9602 hypothetical protein YP_004214602.1 4241769 R 741091 CDS YP_004214603.1 322834576 10214920 4242928..4244148 1 NC_015061.1 TIGRFAM: arginine deiminase; KEGG: ctu:Ctu_04920 arginine deiminase; PFAM: amidinotransferase; arginine deiminase 4244148 10214920 Rahaq_3887 Rahnella sp. Y9602 arginine deiminase YP_004214603.1 4242928 D 741091 CDS YP_004214604.1 322834577 10214921 4244171..4245082 1 NC_015061.1 TIGRFAM: carbamate kinase; KEGG: enc:ECL_00670 carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase; carbamate kinase 4245082 10214921 Rahaq_3888 Rahnella sp. Y9602 carbamate kinase YP_004214604.1 4244171 D 741091 CDS YP_004214605.1 322834578 10214922 4245116..4246123 1 NC_015061.1 TIGRFAM: ornithine carbamoyltransferase; KEGG: ctu:Ctu_04900 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; ornithine carbamoyltransferase 4246123 10214922 Rahaq_3889 Rahnella sp. Y9602 ornithine carbamoyltransferase YP_004214605.1 4245116 D 741091 CDS YP_004214606.1 322834579 10214923 4246176..4247579 1 NC_015061.1 PFAM: C4-dicarboxylate anaerobic carrier-like; KEGG: aha:AHA_4090 transporter; C4-dicarboxylate anaerobic carrier-like protein 4247579 10214923 Rahaq_3890 Rahnella sp. Y9602 C4-dicarboxylate anaerobic carrier-like protein YP_004214606.1 4246176 D 741091 CDS YP_004214607.1 322834580 10214924 4247641..4248147 1 NC_015061.1 PFAM: Arginine repressor-like; KEGG: ddc:Dd586_0384 arginine repressor, ArgR; arginine repressor ArgR 4248147 10214924 Rahaq_3891 Rahnella sp. Y9602 arginine repressor ArgR YP_004214607.1 4247641 D 741091 CDS YP_004214608.1 322834581 10214925 4248214..4248327 1 NC_015061.1 hypothetical protein 4248327 10214925 Rahaq_3892 Rahnella sp. Y9602 hypothetical protein YP_004214608.1 4248214 D 741091 CDS YP_004214609.1 322834582 10214926 4248398..4249333 1 NC_015061.1 KEGG: spe:Spro_0545 aspartate carbamoyltransferase catalytic subunit; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate carbamoyltransferase 4249333 10214926 Rahaq_3893 Rahnella sp. Y9602 aspartate carbamoyltransferase YP_004214609.1 4248398 D 741091 CDS YP_004214610.1 322834583 10214927 4249353..4249817 1 NC_015061.1 KEGG: sew:SeSA_A4712 aspartate carbamoyltransferase regulatory subunit; TIGRFAM: aspartate carbamoyltransferase, regulatory subunit; PFAM: Aspartate carbamoyltransferase regulatory subunit-like; aspartate carbamoyltransferase 4249817 10214927 Rahaq_3894 Rahnella sp. Y9602 aspartate carbamoyltransferase YP_004214610.1 4249353 D 741091 CDS YP_004214611.1 322834584 10214928 4249873..4250259 1 NC_015061.1 KEGG: yen:YE3768 hypothetical protein; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP 4250259 10214928 Rahaq_3895 Rahnella sp. Y9602 endoribonuclease L-PSP YP_004214611.1 4249873 D 741091 CDS YP_004214612.1 322834585 10214929 complement(4250342..4250872) 1 NC_015061.1 KEGG: tet:TTHERM_01553980 hypothetical protein; hypothetical protein 4250872 10214929 Rahaq_3896 Rahnella sp. Y9602 hypothetical protein YP_004214612.1 4250342 R 741091 CDS YP_004214613.1 322834586 10214930 complement(4251179..4251709) 1 NC_015061.1 KEGG: cce:Ccel_0802 peptidase S16, lon-like protein; hypothetical protein 4251709 10214930 Rahaq_3897 Rahnella sp. Y9602 hypothetical protein YP_004214613.1 4251179 R 741091 CDS YP_004214614.1 322834587 10214931 complement(4251706..4251894) 1 NC_015061.1 hypothetical protein 4251894 10214931 Rahaq_3898 Rahnella sp. Y9602 hypothetical protein YP_004214614.1 4251706 R 741091 CDS YP_004214615.1 322834588 10214932 complement(4251870..4252028) 1 NC_015061.1 hypothetical protein 4252028 10214932 Rahaq_3899 Rahnella sp. Y9602 hypothetical protein YP_004214615.1 4251870 R 741091 CDS YP_004214616.1 322834589 10214933 complement(4252025..4252375) 1 NC_015061.1 KEGG: pap:PSPA7_1429 chemotaxis transducer; hypothetical protein 4252375 10214933 Rahaq_3900 Rahnella sp. Y9602 hypothetical protein YP_004214616.1 4252025 R 741091 CDS YP_004214617.1 322834590 10214934 complement(4252348..4252554) 1 NC_015061.1 KEGG: phu:Phum_PHUM169820 multidrug resistance protein; hypothetical protein 4252554 10214934 Rahaq_3901 Rahnella sp. Y9602 hypothetical protein YP_004214617.1 4252348 R 741091 CDS YP_004214618.1 322834591 10214935 complement(4252551..4254584) 1 NC_015061.1 KEGG: ses:SARI_02598 hypothetical protein; hypothetical protein 4254584 10214935 Rahaq_3902 Rahnella sp. Y9602 hypothetical protein YP_004214618.1 4252551 R 741091 CDS YP_004214619.1 322834592 10214936 complement(4254657..4256972) 1 NC_015061.1 KEGG: ses:SARI_02603 hypothetical protein; TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; PFAM: Protein of unknown function DUF2345; Rhs element Vgr protein 4256972 10214936 Rahaq_3903 Rahnella sp. Y9602 Rhs element Vgr protein YP_004214619.1 4254657 R 741091 CDS YP_004214620.1 322834593 10214937 complement(4257033..4257179) 1 NC_015061.1 hypothetical protein 4257179 10214937 Rahaq_3904 Rahnella sp. Y9602 hypothetical protein YP_004214620.1 4257033 R 741091 CDS YP_004214621.1 322834594 10214938 4257366..4258817 1 NC_015061.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: yen:YE3769 hypothetical protein; hypothetical protein 4258817 10214938 Rahaq_3905 Rahnella sp. Y9602 hypothetical protein YP_004214621.1 4257366 D 741091 CDS YP_004214622.1 322834595 10214939 4258811..4259752 1 NC_015061.1 PFAM: protein of unknown function DUF403; KEGG: spe:Spro_0539 hypothetical protein; hypothetical protein 4259752 10214939 Rahaq_3906 Rahnella sp. Y9602 hypothetical protein YP_004214622.1 4258811 D 741091 CDS YP_004214623.1 322834596 10214940 4259752..4260546 1 NC_015061.1 KEGG: spe:Spro_0538 transglutaminase domain-containing protein; PFAM: transglutaminase domain protein; transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein; transglutaminase domain-containing protein 4260546 10214940 Rahaq_3907 Rahnella sp. Y9602 transglutaminase domain-containing protein YP_004214623.1 4259752 D 741091 CDS YP_004214624.1 322834597 10214941 4260573..4261304 1 NC_015061.1 PFAM: 20S proteasome A and B subunits; KEGG: yen:YE3772 hypothetical protein; 20S proteasome subunits A/B 4261304 10214941 Rahaq_3908 Rahnella sp. Y9602 20S proteasome subunits A/B YP_004214624.1 4260573 D 741091 CDS YP_004214625.1 322834598 10214942 4261404..4262435 1 NC_015061.1 KEGG: enc:ECL_01791 LacI family transcription regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator 4262435 10214942 Rahaq_3909 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004214625.1 4261404 D 741091 CDS YP_004214626.1 322834599 10214943 complement(4262481..4263491) 1 NC_015061.1 PFAM: Outer membrane protein G; KEGG: ses:SARI_03140 hypothetical protein; Outer membrane protein G 4263491 10214943 Rahaq_3910 Rahnella sp. Y9602 Outer membrane protein G YP_004214626.1 4262481 R 741091 CDS YP_004214627.1 322834600 10214944 complement(4263591..4264679) 1 NC_015061.1 KEGG: ctu:Ctu_23070 uncharacterized ABC transporter ATP-binding protein YcjV; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter 4264679 10214944 Rahaq_3911 Rahnella sp. Y9602 ABC transporter YP_004214627.1 4263591 R 741091 CDS YP_004214628.1 322834601 10214945 complement(4264689..4265372) 1 NC_015061.1 KEGG: ctu:Ctu_23080 beta-phosphoglucomutase; TIGRFAM: beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; beta-phosphoglucomutase 4265372 10214945 Rahaq_3912 Rahnella sp. Y9602 beta-phosphoglucomutase YP_004214628.1 4264689 R 741091 CDS YP_004214629.1 322834602 10214946 complement(4265362..4267608) 1 NC_015061.1 PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: cro:ROD_16931 glycosyl hydrolase; glycoside hydrolase 4267608 10214946 Rahaq_3913 Rahnella sp. Y9602 glycoside hydrolase YP_004214629.1 4265362 R 741091 CDS YP_004214630.1 322834603 10214947 complement(4267605..4268663) 1 NC_015061.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ses:SARI_01290 hypothetical protein; oxidoreductase domain-containing protein 4268663 10214947 Rahaq_3914 Rahnella sp. Y9602 oxidoreductase domain-containing protein YP_004214630.1 4267605 R 741091 CDS YP_004214631.1 322834604 10214948 complement(4268679..4269470) 1 NC_015061.1 PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: enc:ECL_01785 xylose isomerase domain-containing protein; xylose isomerase domain-containing protein TIM barrel 4269470 10214948 Rahaq_3915 Rahnella sp. Y9602 xylose isomerase domain-containing protein TIM barrel YP_004214631.1 4268679 R 741091 CDS YP_004214632.1 322834605 10214949 complement(4269483..4270535) 1 NC_015061.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: ecg:E2348C_1505 predicted oxidoreductase, Zn-dependent and NAD(P)-binding; alcohol dehydrogenase 4270535 10214949 Rahaq_3916 Rahnella sp. Y9602 alcohol dehydrogenase YP_004214632.1 4269483 R 741091 CDS YP_004214633.1 322834606 10214950 complement(4270579..4271424) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ent:Ent638_2162 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4271424 10214950 Rahaq_3917 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004214633.1 4270579 R 741091 CDS YP_004214634.1 322834607 10214951 complement(4271411..4272292) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: enc:ECL_01782 multiple sugar transport system permease protein; binding-protein-dependent transport system inner membrane protein 4272292 10214951 Rahaq_3918 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004214634.1 4271411 R 741091 CDS YP_004214635.1 322834608 10214952 complement(4272323..4273627) 1 NC_015061.1 PFAM: extracellular solute-binding protein family 1; KEGG: cro:ROD_16991 ABC transporter periplasmic binding protein; extracellular solute-binding protein 4273627 10214952 Rahaq_3919 Rahnella sp. Y9602 extracellular solute-binding protein YP_004214635.1 4272323 R 741091 CDS YP_004214636.1 322834609 10214953 complement(4273722..4275401) 1 NC_015061.1 KEGG: ebi:EbC_42080 sucrose phosphorylase; PFAM: alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; alpha amylase 4275401 10214953 Rahaq_3920 Rahnella sp. Y9602 alpha amylase YP_004214636.1 4273722 R 741091 CDS YP_004214637.1 322834610 10214954 complement(4275596..4276150) 1 NC_015061.1 KEGG: pct:PC1_0532 hypothetical protein; hypothetical protein 4276150 10214954 Rahaq_3921 Rahnella sp. Y9602 hypothetical protein YP_004214637.1 4275596 R 741091 CDS YP_004214638.1 322834611 10214955 complement(4276247..4277737) 1 NC_015061.1 KEGG: ddc:Dd586_0557 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; altronate dehydratase 4277737 10214955 Rahaq_3922 Rahnella sp. Y9602 altronate dehydratase YP_004214638.1 4276247 R 741091 CDS YP_004214639.1 322834612 10214956 complement(4277748..4279199) 1 NC_015061.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: yen:YE3707 altronate oxidoreductase; mannitol dehydrogenase 4279199 10214956 Rahaq_3923 Rahnella sp. Y9602 mannitol dehydrogenase YP_004214639.1 4277748 R 741091 CDS YP_004214640.1 322834613 10214957 complement(4279356..4280768) 1 NC_015061.1 KEGG: yen:YE3708 glucuronate isomerase; PFAM: glucuronate isomerase; glucuronate isomerase 4280768 10214957 Rahaq_3924 Rahnella sp. Y9602 glucuronate isomerase YP_004214640.1 4279356 R 741091 CDS YP_004214641.1 322834614 10214958 4281739..4283031 1 NC_015061.1 KEGG: spe:Spro_4322 D-galactonate transporter; TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; d-galactonate transporter 4283031 10214958 Rahaq_3925 Rahnella sp. Y9602 d-galactonate transporter YP_004214641.1 4281739 D 741091 CDS YP_004214642.1 322834615 10214959 4283222..4283998 1 NC_015061.1 KEGG: yen:YE3710 DNA-binding transcriptional repressor ExuR; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 4283998 10214959 Rahaq_3926 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004214642.1 4283222 D 741091 CDS YP_004214643.1 322834616 10214960 4284382..4285062 1 NC_015061.1 PFAM: SNARE associated Golgi protein; KEGG: spe:Spro_4325 SNARE associated golgi protein; hypothetical protein 4285062 10214960 Rahaq_3927 Rahnella sp. Y9602 hypothetical protein YP_004214643.1 4284382 D 741091 CDS YP_004214644.1 322834617 10214961 4285062..4285445 1 NC_015061.1 KEGG: spe:Spro_4326 hypothetical protein; hypothetical protein 4285445 10214961 Rahaq_3928 Rahnella sp. Y9602 hypothetical protein YP_004214644.1 4285062 D 741091 CDS YP_004214645.1 322834618 10214962 4285575..4285955 1 NC_015061.1 PFAM: protein of unknown function DUF1090; KEGG: spe:Spro_4327 hypothetical protein; hypothetical protein 4285955 10214962 Rahaq_3929 Rahnella sp. Y9602 hypothetical protein YP_004214645.1 4285575 D 741091 CDS YP_004214646.1 322834619 10214963 4286103..4286405 1 NC_015061.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: yen:YE3715 hypothetical protein; hypothetical protein 4286405 10214963 Rahaq_3930 Rahnella sp. Y9602 hypothetical protein YP_004214646.1 4286103 D 741091 CDS YP_004214647.1 322834620 10214964 4286408..4286815 1 NC_015061.1 KEGG: yen:YE3716 hypothetical protein; hypothetical protein 4286815 10214964 Rahaq_3931 Rahnella sp. Y9602 hypothetical protein YP_004214647.1 4286408 D 741091 CDS YP_004214648.1 322834621 10214965 4286812..4287096 1 NC_015061.1 KEGG: yen:YE3717 hypothetical protein; hypothetical protein 4287096 10214965 Rahaq_3932 Rahnella sp. Y9602 hypothetical protein YP_004214648.1 4286812 D 741091 CDS YP_004214649.1 322834622 10214966 4287337..4287729 1 NC_015061.1 PFAM: DoxX family protein; KEGG: eay:EAM_0490 membrane protein; DoxX family protein 4287729 10214966 Rahaq_3933 Rahnella sp. Y9602 DoxX family protein YP_004214649.1 4287337 D 741091 CDS YP_004214650.1 322834623 10214967 4287904..4288887 1 NC_015061.1 KEGG: spe:Spro_4332 hypothetical protein; PFAM: Glutathione S-transferase domain; glutathione transferase 4288887 10214967 Rahaq_3934 Rahnella sp. Y9602 glutathione transferase YP_004214650.1 4287904 D 741091 CDS YP_004214651.1 322834624 10214968 complement(4288929..4289834) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_4333 LysR family transcriptional regulator; LysR family transcriptional regulator 4289834 10214968 Rahaq_3935 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004214651.1 4288929 R 741091 CDS YP_004214652.1 322834625 10214969 4289945..4290649 1 NC_015061.1 PFAM: Pirin domain protein; KEGG: spe:Spro_4334 pirin domain-containing protein; pirin 4290649 10214969 Rahaq_3936 Rahnella sp. Y9602 pirin YP_004214652.1 4289945 D 741091 CDS YP_004214653.1 322834626 10214970 4291248..4291946 1 NC_015061.1 PFAM: Toxin-coregulated pilus subunit TcpA; KEGG: cro:ROD_46461 type IV pilin; Toxin-coregulated pilus subunit TcpA 4291946 10214970 Rahaq_3937 Rahnella sp. Y9602 Toxin-coregulated pilus subunit TcpA YP_004214653.1 4291248 D 741091 CDS YP_004214654.1 322834627 10214971 4292042..4293709 1 NC_015061.1 KEGG: cro:ROD_46471 type IV pilus biogenesis protein; hypothetical protein 4293709 10214971 Rahaq_3938 Rahnella sp. Y9602 hypothetical protein YP_004214654.1 4292042 D 741091 CDS YP_004214655.1 322834628 10214972 4293768..4294208 1 NC_015061.1 KEGG: cro:ROD_46481 type IV pilus biogenesis protein; type IV pilus biogenesis protein 4294208 10214972 Rahaq_3939 Rahnella sp. Y9602 type IV pilus biogenesis protein YP_004214655.1 4293768 D 741091 CDS YP_004214656.1 322834629 10214973 4294232..4295680 1 NC_015061.1 PFAM: type II and III secretion system protein; KEGG: cro:ROD_46491 type IV pilus biogenesis protein; type II and III secretion system protein 4295680 10214973 Rahaq_3940 Rahnella sp. Y9602 type II and III secretion system protein YP_004214656.1 4294232 D 741091 CDS YP_004214657.1 322834630 10214974 4295699..4296256 1 NC_015061.1 KEGG: cro:ROD_46501 type IV pilus biogenesis protein; type IV pilus biogenesis protein 4296256 10214974 Rahaq_3941 Rahnella sp. Y9602 type IV pilus biogenesis protein YP_004214657.1 4295699 D 741091 CDS YP_004214658.1 322834631 10214975 4296261..4297109 1 NC_015061.1 KEGG: cro:ROD_46511 type IV pilus biogenesis protein; hypothetical protein 4297109 10214975 Rahaq_3942 Rahnella sp. Y9602 hypothetical protein YP_004214658.1 4296261 D 741091 CDS YP_004214659.1 322834632 10214976 4297091..4297594 1 NC_015061.1 KEGG: cro:ROD_46521 type IV pilus biogenesis protein; hypothetical protein 4297594 10214976 Rahaq_3943 Rahnella sp. Y9602 hypothetical protein YP_004214659.1 4297091 D 741091 CDS YP_004214660.1 322834633 10214977 4297591..4299120 1 NC_015061.1 PFAM: type II secretion system protein E; KEGG: cro:ROD_46531 type IV pilus biogenesis protein CfcH; type II secretion system protein E 4299120 10214977 Rahaq_3944 Rahnella sp. Y9602 type II secretion system protein E YP_004214660.1 4297591 D 741091 CDS YP_004214661.1 322834634 10214978 4299104..4300150 1 NC_015061.1 PFAM: Type II secretion system F domain; KEGG: cro:ROD_46541 type IV pilus biogenesis protein; type II secretion system F domain-containing protein 4300150 10214978 Rahaq_3945 Rahnella sp. Y9602 type II secretion system F domain-containing protein YP_004214661.1 4299104 D 741091 CDS YP_004214662.1 322834635 10214979 4300162..4301508 1 NC_015061.1 KEGG: clu:CLUG_00489 hypothetical protein; hypothetical protein 4301508 10214979 Rahaq_3946 Rahnella sp. Y9602 hypothetical protein YP_004214662.1 4300162 D 741091 CDS YP_004214663.1 322834636 10214980 4301564..4302394 1 NC_015061.1 KEGG: cro:ROD_46561 prepillin peptidase CfcP; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; prepilin peptidase 4302394 10214980 Rahaq_3947 Rahnella sp. Y9602 prepilin peptidase YP_004214663.1 4301564 D 741091 CDS YP_004214664.1 322834637 10214981 4302398..4303207 1 NC_015061.1 PFAM: Peptidase M23; KEGG: cro:ROD_46571 prepillin peptidase; peptidase M23 4303207 10214981 Rahaq_3948 Rahnella sp. Y9602 peptidase M23 YP_004214664.1 4302398 D 741091 CDS YP_004214665.1 322834638 10214983 complement(4303667..4304536) 1 NC_015061.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: yen:YE3726 tetrapyrrole methylase; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 4304536 10214983 Rahaq_3949 Rahnella sp. Y9602 uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_004214665.1 4303667 R 741091 CDS YP_004214666.1 322834639 10214984 4304598..4306634 1 NC_015061.1 KEGG: spe:Spro_4336 LppC family lipoprotein; LppC family lipoprotein 4306634 10214984 Rahaq_3950 Rahnella sp. Y9602 LppC family lipoprotein YP_004214666.1 4304598 D 741091 CDS YP_004214667.1 322834640 10214985 4306700..4307068 1 NC_015061.1 PFAM: Uncharacterised protein family UPF0102; KEGG: spe:Spro_4337 hypothetical protein; hypothetical protein 4307068 10214985 Rahaq_3951 Rahnella sp. Y9602 hypothetical protein YP_004214667.1 4306700 D 741091 CDS YP_004214668.1 322834641 10214986 4307099..4307689 1 NC_015061.1 PFAM: sugar isomerase (SIS); KEGG: enc:ECL_04531 DnaA initiator-associating protein DiaA; sugar isomerase (SIS) 4307689 10214986 Rahaq_3952 Rahnella sp. Y9602 sugar isomerase (SIS) YP_004214668.1 4307099 D 741091 CDS YP_004214669.1 322834642 10214987 4307699..4308274 1 NC_015061.1 KEGG: spe:Spro_4339 hypothetical protein; PFAM: transport-associated; SMART: Transport-associated and nodulation region; transport-associated protein 4308274 10214987 Rahaq_3953 Rahnella sp. Y9602 transport-associated protein YP_004214669.1 4307699 D 741091 CDS YP_004214670.1 322834643 10214988 complement(4308354..4309076) 1 NC_015061.1 KEGG: ebi:EbC_40430 monofunctional biosynthetic peptidoglycan transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; monofunctional biosynthetic peptidoglycan transglycosylase 4309076 10214988 Rahaq_3954 Rahnella sp. Y9602 monofunctional biosynthetic peptidoglycan transglycosylase YP_004214670.1 4308354 R 741091 CDS YP_004214671.1 322834644 10214989 complement(4309973..4312312) 1 NC_015061.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; response regulator receiver; Hpt domain protein; KEGG: spe:Spro_4342 aerobic respiration control sensor protein ArcB; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver; Hpt domain protein; multi-sensor hybrid histidine kinase 4312312 10214989 Rahaq_3955 Rahnella sp. Y9602 multi-sensor hybrid histidine kinase YP_004214671.1 4309973 R 741091 CDS YP_004214672.1 322834645 10214990 4313185..4317642 1 NC_015061.1 KEGG: ypb:YPTS_3687 glutamate synthase subunit alpha; PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase subunit alpha domain protein; glutamate synthase (ferredoxin) 4317642 10214990 Rahaq_3956 Rahnella sp. Y9602 glutamate synthase (ferredoxin) YP_004214672.1 4313185 D 741091 CDS YP_004214673.1 322834646 10214991 4317652..4319070 1 NC_015061.1 KEGG: dda:Dd703_3634 glutamate synthase subunit beta; TIGRFAM: glutamate synthase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutamate synthase, small subunit 4319070 10214991 Rahaq_3957 Rahnella sp. Y9602 glutamate synthase, small subunit YP_004214673.1 4317652 D 741091 CDS YP_004214674.1 322834647 10214992 complement(4319233..4319727) 1 NC_015061.1 PFAM: Stringent starvation protein B; KEGG: spe:Spro_4346 ClpXP protease specificity-enhancing factor; stringent starvation protein B 4319727 10214992 Rahaq_3958 Rahnella sp. Y9602 stringent starvation protein B YP_004214674.1 4319233 R 741091 CDS YP_004214675.1 322834648 10214993 complement(4319731..4320372) 1 NC_015061.1 PFAM: Glutathione S-transferase domain; KEGG: epy:EpC_03140 stringent starvation protein A; glutathione S-transferase 4320372 10214993 Rahaq_3959 Rahnella sp. Y9602 glutathione S-transferase YP_004214675.1 4319731 R 741091 CDS YP_004214676.1 322834649 10214994 complement(4320707..4321099) 1 NC_015061.1 PFAM: ribosomal protein S9; KEGG: eca:ECA0307 30S ribosomal protein S9; 30S ribosomal protein S9 4321099 10214994 Rahaq_3960 Rahnella sp. Y9602 30S ribosomal protein S9 YP_004214676.1 4320707 R 741091 CDS YP_004214677.1 322834650 10214995 complement(4321116..4321544) 1 NC_015061.1 KEGG: pam:PANA_0413 RplM; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13; 50S ribosomal protein L13 4321544 10214995 Rahaq_3961 Rahnella sp. Y9602 50S ribosomal protein L13 YP_004214677.1 4321116 R 741091 CDS YP_004214678.1 322834651 10214996 complement(4321566..4321805) 1 NC_015061.1 KEGG: fno:Fnod_0984 DNA-directed DNA polymerase; hypothetical protein 4321805 10214996 Rahaq_3962 Rahnella sp. Y9602 hypothetical protein YP_004214678.1 4321566 R 741091 CDS YP_004214679.1 322834652 10214997 complement(4321863..4323002) 1 NC_015061.1 PFAM: AFG1-family ATPase; KEGG: spe:Spro_4350 AFG1 family ATPase; AFG1 family ATPase 4323002 10214997 Rahaq_3963 Rahnella sp. Y9602 AFG1 family ATPase YP_004214679.1 4321863 R 741091 CDS YP_004214680.1 322834653 10214998 4323288..4323689 1 NC_015061.1 PFAM: protein of unknown function DUF1043; KEGG: pwa:Pecwa_0297 cytochrome d ubiquinol oxidase subunit III; hypothetical protein 4323689 10214998 Rahaq_3964 Rahnella sp. Y9602 hypothetical protein YP_004214680.1 4323288 D 741091 CDS YP_004214681.1 322834654 10214999 4323844..4325211 1 NC_015061.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: spe:Spro_4352 protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 4325211 10214999 Rahaq_3965 Rahnella sp. Y9602 protease Do YP_004214681.1 4323844 D 741091 CDS YP_004214682.1 322834655 10215000 4325233..4326366 1 NC_015061.1 TIGRFAM: periplasmic serine protease DegS; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: esa:ESA_03621 serine endoprotease; SMART: PDZ/DHR/GLGF domain protein; periplasmic serine protease DegS 4326366 10215000 Rahaq_3966 Rahnella sp. Y9602 periplasmic serine protease DegS YP_004214682.1 4325233 D 741091 CDS YP_004214683.1 322834656 10215001 complement(4326443..4327702) 1 NC_015061.1 KEGG: spe:Spro_4354 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); UDP-N-acetylglucosamine 1-carboxyvinyltransferase 4327702 10215001 Rahaq_3967 Rahnella sp. Y9602 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_004214683.1 4326443 R 741091 CDS YP_004214684.1 322834657 10215002 complement(4327770..4328024) 1 NC_015061.1 PFAM: BolA family protein; KEGG: spe:Spro_4355 BolA family protein; BolA family protein 4328024 10215002 Rahaq_3968 Rahnella sp. Y9602 BolA family protein YP_004214684.1 4327770 R 741091 CDS YP_004214685.1 322834658 10215003 complement(4328193..4328507) 1 NC_015061.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: spe:Spro_4356 anti-sigma-factor antagonist; anti-sigma-factor antagonist 4328507 10215003 Rahaq_3969 Rahnella sp. Y9602 anti-sigma-factor antagonist YP_004214685.1 4328193 R 741091 CDS YP_004214686.1 322834659 10215004 complement(4328504..4329139) 1 NC_015061.1 PFAM: toluene tolerance family protein; KEGG: ebi:EbC_40280 toluene tolerance ABC transporter auxiliary subunit; toluene tolerance family protein 4329139 10215004 Rahaq_3970 Rahnella sp. Y9602 toluene tolerance family protein YP_004214686.1 4328504 R 741091 CDS YP_004214687.1 322834660 10215005 complement(4329181..4329747) 1 NC_015061.1 PFAM: Mammalian cell entry related domain protein; KEGG: ebi:EbC_40290 toluene tolerance ABC transporter periplasmic subunit; mammalian cell entry domain-containing protein 4329747 10215005 Rahaq_3971 Rahnella sp. Y9602 mammalian cell entry domain-containing protein YP_004214687.1 4329181 R 741091 CDS YP_004214688.1 322834661 10215006 complement(4329751..4330533) 1 NC_015061.1 PFAM: protein of unknown function DUF140; KEGG: ypb:YPTS_3704 hypothetical protein; hypothetical protein 4330533 10215006 Rahaq_3972 Rahnella sp. Y9602 hypothetical protein YP_004214688.1 4329751 R 741091 CDS YP_004214689.1 322834662 10215007 complement(4330549..4331352) 1 NC_015061.1 KEGG: yen:YE3752 ABC transporter ATP-binding protein YrbF; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 4331352 10215007 Rahaq_3973 Rahnella sp. Y9602 ABC transporter YP_004214689.1 4330549 R 741091 CDS YP_004214690.1 322834663 10215008 4331660..4332637 1 NC_015061.1 KEGG: spe:Spro_4361 calcium/sodium:proton antiporter; TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; CaCA family Na+/Ca+ antiporter 4332637 10215008 Rahaq_3974 Rahnella sp. Y9602 CaCA family Na+/Ca+ antiporter YP_004214690.1 4331660 D 741091 CDS YP_004214691.1 322834664 10215009 4332657..4333643 1 NC_015061.1 TIGRFAM: KpsF/GutQ family protein; KEGG: ebi:EbC_40330 D-arabinose 5-phosphate isomerase; PFAM: sugar isomerase (SIS); CBS domain containing protein; KpsF/GutQ family protein 4333643 10215009 Rahaq_3975 Rahnella sp. Y9602 KpsF/GutQ family protein YP_004214691.1 4332657 D 741091 CDS YP_004214692.1 322834665 10215010 4333660..4334226 1 NC_015061.1 TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: spe:Spro_4363 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 4334226 10215010 Rahaq_3976 Rahnella sp. Y9602 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_004214692.1 4333660 D 741091 CDS YP_004214693.1 322834666 10215011 4334223..4334792 1 NC_015061.1 PFAM: protein of unknown function DUF1239; KEGG: spe:Spro_4364 hypothetical protein; hypothetical protein 4334792 10215011 Rahaq_3977 Rahnella sp. Y9602 hypothetical protein YP_004214693.1 4334223 D 741091 CDS YP_004214694.1 322834667 10215012 4334770..4335327 1 NC_015061.1 KEGG: yen:YE3757 lipopolysaccharide transport periplasmic protein LptA; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; lipopolysaccharide transport periplasmic protein LptA 4335327 10215012 Rahaq_3978 Rahnella sp. Y9602 lipopolysaccharide transport periplasmic protein LptA YP_004214694.1 4334770 D 741091 CDS YP_004214695.1 322834668 10215013 4335334..4336059 1 NC_015061.1 KEGG: sgl:SG0200 ABC transporter ATP-binding protein YhbG; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 4336059 10215013 Rahaq_3979 Rahnella sp. Y9602 ABC transporter YP_004214695.1 4335334 D 741091 CDS YP_004214696.1 322834669 10215014 4336161..4337594 1 NC_015061.1 KEGG: spe:Spro_4367 RNA polymerase factor sigma-54; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor; RNA polymerase sigma 54 subunit RpoN 4337594 10215014 Rahaq_3980 Rahnella sp. Y9602 RNA polymerase sigma 54 subunit RpoN YP_004214696.1 4336161 D 741091 CDS YP_004214697.1 322834670 10215015 4337618..4337905 1 NC_015061.1 KEGG: spe:Spro_4368 sigma(54) modulation protein; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/ribosomal protein S30EA 4337905 10215015 Rahaq_3981 Rahnella sp. Y9602 sigma 54 modulation protein/ribosomal protein S30EA YP_004214697.1 4337618 D 741091 CDS YP_004214698.1 322834671 10215016 4338016..4338486 1 NC_015061.1 KEGG: sgl:SG0197 PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN; TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 4338486 10215016 Rahaq_3982 Rahnella sp. Y9602 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_004214698.1 4338016 D 741091 CDS YP_004214699.1 322834672 10215017 4338554..4339408 1 NC_015061.1 KEGG: spe:Spro_4370 hypothetical protein; hypothetical protein 4339408 10215017 Rahaq_3983 Rahnella sp. Y9602 hypothetical protein YP_004214699.1 4338554 D 741091 CDS YP_004214700.1 322834673 10215018 4339405..4339677 1 NC_015061.1 KEGG: yen:YE3763 phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr); TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; phosphotransferase system, phosphocarrier protein HPr 4339677 10215018 Rahaq_3984 Rahnella sp. Y9602 phosphotransferase system, phosphocarrier protein HPr YP_004214700.1 4339405 D 741091 CDS YP_004214701.1 322834674 10215019 complement(4339703..4341622) 1 NC_015061.1 KEGG: yen:YE3777 transcriptional regulator; PFAM: PRD domain protein; M trans-acting positive regulator; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; transcriptional antiterminator BglG 4341622 10215019 Rahaq_3985 Rahnella sp. Y9602 transcriptional antiterminator BglG YP_004214701.1 4339703 R 741091 CDS YP_004214702.1 322834675 10215021 complement(4341839..4342579) 1 NC_015061.1 PFAM: protein of unknown function DUF1341; KEGG: spe:Spro_4374 hypothetical protein; hypothetical protein 4342579 10215021 Rahaq_3987 Rahnella sp. Y9602 hypothetical protein YP_004214702.1 4341839 R 741091 CDS YP_004214703.1 322834676 10215022 complement(4342576..4343703) 1 NC_015061.1 KEGG: spe:Spro_4375 pyridoxal phosphate-dependent enzyme; TIGRFAM: pyridoxal phosphate-dependent enzyme; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; pyridoxal phosphate-dependent enzyme 4343703 10215022 Rahaq_3988 Rahnella sp. Y9602 pyridoxal phosphate-dependent enzyme YP_004214703.1 4342576 R 741091 CDS YP_004214704.1 322834677 10215023 complement(4343693..4344826) 1 NC_015061.1 PFAM: amidohydrolase; KEGG: yen:YE3781 dihydroorotase; amidohydrolase 4344826 10215023 Rahaq_3989 Rahnella sp. Y9602 amidohydrolase YP_004214704.1 4343693 R 741091 CDS YP_004214705.1 322834678 10215024 complement(4344908..4345555) 1 NC_015061.1 KEGG: spe:Spro_4377 inner membrane protein; inner membrane protein 4345555 10215024 Rahaq_3990 Rahnella sp. Y9602 inner membrane protein YP_004214705.1 4344908 R 741091 CDS YP_004214706.1 322834679 10215025 complement(4345569..4346345) 1 NC_015061.1 KEGG: ebi:EbC_04880 inner membrane protein; inner membrane protein 4346345 10215025 Rahaq_3991 Rahnella sp. Y9602 inner membrane protein YP_004214706.1 4345569 R 741091 CDS YP_004214707.1 322834680 10215026 complement(4346378..4346677) 1 NC_015061.1 KEGG: spe:Spro_4379 hypothetical protein; hypothetical protein 4346677 10215026 Rahaq_3992 Rahnella sp. Y9602 hypothetical protein YP_004214707.1 4346378 R 741091 CDS YP_004214708.1 322834681 10215027 complement(4346677..4347042) 1 NC_015061.1 KEGG: cko:CKO_03590 hypothetical protein; hypothetical protein 4347042 10215027 Rahaq_3993 Rahnella sp. Y9602 hypothetical protein YP_004214708.1 4346677 R 741091 CDS YP_004214709.1 322834682 10215028 complement(4347089..4347439) 1 NC_015061.1 KEGG: yen:YE3786 hypothetical protein; manually curated; PFAM: PRD domain protein; PRD domain-containing protein 4347439 10215028 Rahaq_3994 Rahnella sp. Y9602 PRD domain-containing protein YP_004214709.1 4347089 R 741091 CDS YP_004214710.1 322834683 10215029 4347839..4348249 1 NC_015061.1 KEGG: spe:Spro_4382 nucleoside diphosphate kinase regulator; GreA/GreB family elongation factor 4348249 10215029 Rahaq_3995 Rahnella sp. Y9602 GreA/GreB family elongation factor YP_004214710.1 4347839 D 741091 CDS YP_004214711.1 322834684 10215030 4348277..4348390 1 NC_015061.1 hypothetical protein 4348390 10215030 Rahaq_3996 Rahnella sp. Y9602 hypothetical protein YP_004214711.1 4348277 D 741091 CDS YP_004214712.1 322834685 10215031 complement(4348955..4349341) 1 NC_015061.1 PFAM: cytochrome b562; KEGG: spe:Spro_4383 cytochrome b562; cytochrome b562 4349341 10215031 Rahaq_3997 Rahnella sp. Y9602 cytochrome b562 YP_004214712.1 4348955 R 741091 CDS YP_004214713.1 322834686 10215032 complement(4349489..4350835) 1 NC_015061.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: ypb:YPTS_3727 peptidase PmbA; peptidase U62 modulator of DNA gyrase 4350835 10215032 Rahaq_3998 Rahnella sp. Y9602 peptidase U62 modulator of DNA gyrase YP_004214713.1 4349489 R 741091 CDS YP_004214714.1 322834687 10215033 4351057..4351608 1 NC_015061.1 PFAM: protein of unknown function DUF615; KEGG: spe:Spro_4387 hypothetical protein; hypothetical protein 4351608 10215033 Rahaq_3999 Rahnella sp. Y9602 hypothetical protein YP_004214714.1 4351057 D 741091 CDS YP_004214715.1 322834688 10215034 complement(4351661..4351954) 1 NC_015061.1 PFAM: Barstar (barnase inhibitor); KEGG: yen:YE3791 ribonuclease inhibitor; barnase inhibitor 4351954 10215034 Rahaq_4000 Rahnella sp. Y9602 barnase inhibitor YP_004214715.1 4351661 R 741091 CDS YP_004214716.1 322834689 10215035 complement(4351960..4352406) 1 NC_015061.1 PFAM: guanine-specific ribonuclease N1 and T1; KEGG: spe:Spro_4389 guanine-specific ribonuclease N1 and T1; guanine-specific ribonuclease N1 and T1 4352406 10215035 Rahaq_4001 Rahnella sp. Y9602 guanine-specific ribonuclease N1 and T1 YP_004214716.1 4351960 R 741091 CDS YP_004214717.1 322834690 10215036 complement(4352484..4353944) 1 NC_015061.1 KEGG: yen:YE3793 succinate-semialdehyde dehydrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; succinate-semialdehyde dehydrogenase 4353944 10215036 Rahaq_4002 Rahnella sp. Y9602 succinate-semialdehyde dehydrogenase YP_004214717.1 4352484 R 741091 CDS YP_004214718.1 322834691 10215037 4354130..4354711 1 NC_015061.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: ses:SARI_02830 galactoside O-acetyltransferase; transferase hexapeptide repeat containing protein 4354711 10215037 Rahaq_4003 Rahnella sp. Y9602 transferase hexapeptide repeat containing protein YP_004214718.1 4354130 D 741091 CDS YP_004214719.1 322834692 10215038 complement(4354719..4356677) 1 NC_015061.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: spe:Spro_4390 p-hydroxybenzoic acid efflux subunit AaeB; fusaric acid resistance protein 4356677 10215038 Rahaq_4004 Rahnella sp. Y9602 fusaric acid resistance protein YP_004214719.1 4354719 R 741091 CDS YP_004214720.1 322834693 10215039 complement(4356688..4357623) 1 NC_015061.1 KEGG: spe:Spro_4391 p-hydroxybenzoic acid efflux subunit AaeA; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 4357623 10215039 Rahaq_4005 Rahnella sp. Y9602 RND family efflux transporter MFP subunit YP_004214720.1 4356688 R 741091 CDS YP_004214721.1 322834694 10215040 complement(4357631..4357834) 1 NC_015061.1 PFAM: protein of unknown function DUF1656; KEGG: spe:Spro_4392 hypothetical protein; hypothetical protein 4357834 10215040 Rahaq_4006 Rahnella sp. Y9602 hypothetical protein YP_004214721.1 4357631 R 741091 CDS YP_004214722.1 322834695 10215041 4358108..4359046 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_4393 DNA-binding transcriptional regulator; LysR family transcriptional regulator 4359046 10215041 Rahaq_4007 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004214722.1 4358108 D 741091 CDS YP_004214723.1 322834696 10215042 complement(4359120..4360565) 1 NC_015061.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: spe:Spro_4404 protease TldD; peptidase U62 modulator of DNA gyrase 4360565 10215042 Rahaq_4008 Rahnella sp. Y9602 peptidase U62 modulator of DNA gyrase YP_004214723.1 4359120 R 741091 CDS YP_004214724.1 322834697 10215043 complement(4360707..4364534) 1 NC_015061.1 KEGG: spe:Spro_4406 hypothetical protein; hypothetical protein 4364534 10215043 Rahaq_4009 Rahnella sp. Y9602 hypothetical protein YP_004214724.1 4360707 R 741091 CDS YP_004214725.1 322834698 10215044 complement(4364633..4366102) 1 NC_015061.1 KEGG: ddc:Dd586_0269 ribonuclease, Rne/Rng family; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein; ribonuclease, Rne/Rng family 4366102 10215044 Rahaq_4010 Rahnella sp. Y9602 ribonuclease, Rne/Rng family YP_004214725.1 4364633 R 741091 CDS YP_004214726.1 322834699 10215045 complement(4366092..4366685) 1 NC_015061.1 KEGG: yen:YE3802 Maf-like protein; TIGRFAM: maf protein; PFAM: Maf family protein; maf protein 4366685 10215045 Rahaq_4011 Rahnella sp. Y9602 maf protein YP_004214726.1 4366092 R 741091 CDS YP_004214727.1 322834700 10215046 complement(4366693..4367181) 1 NC_015061.1 KEGG: ebi:EbC_40710 rod shape-determining protein; TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD; rod shape-determining protein MreD 4367181 10215046 Rahaq_4012 Rahnella sp. Y9602 rod shape-determining protein MreD YP_004214727.1 4366693 R 741091 CDS YP_004214728.1 322834701 10215047 complement(4367178..4368185) 1 NC_015061.1 KEGG: spe:Spro_4410 rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; rod shape-determining protein MreC 4368185 10215047 Rahaq_4013 Rahnella sp. Y9602 rod shape-determining protein MreC YP_004214728.1 4367178 R 741091 CDS YP_004214729.1 322834702 10215048 complement(4368441..4369484) 1 NC_015061.1 KEGG: spe:Spro_4411 rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; MreB/Mrl family cell shape determining protein 4369484 10215048 Rahaq_4014 Rahnella sp. Y9602 MreB/Mrl family cell shape determining protein YP_004214729.1 4368441 R 741091 CDS YP_004214730.1 322834703 10215049 complement(4369840..4371774) 1 NC_015061.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: spe:Spro_4412 regulatory protein CsrD; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 4371774 10215049 Rahaq_4015 Rahnella sp. Y9602 diguanylate cyclase/phosphodiesterase YP_004214730.1 4369840 R 741091 CDS YP_004214731.1 322834704 10215050 4372091..4373092 1 NC_015061.1 PFAM: oxidoreductase molybdopterin binding; KEGG: spe:Spro_4414 sulfite oxidase subunit YedY; oxidoreductase molybdopterin binding protein 4373092 10215050 Rahaq_4016 Rahnella sp. Y9602 oxidoreductase molybdopterin binding protein YP_004214731.1 4372091 D 741091 CDS YP_004214732.1 322834705 10215051 4373111..4373713 1 NC_015061.1 PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: yen:YE3809 sulfite oxidase subunit YedZ; ferric reductase domain-containing transmembrane protein 4373713 10215051 Rahaq_4017 Rahnella sp. Y9602 ferric reductase domain-containing transmembrane protein YP_004214732.1 4373111 D 741091 CDS YP_004214733.1 322834706 10215052 4373955..4374407 1 NC_015061.1 TIGRFAM: 3-dehydroquinate dehydratase, type II; KEGG: spe:Spro_4416 3-dehydroquinate dehydratase; PFAM: dehydroquinase class II; 3-dehydroquinate dehydratase 4374407 10215052 Rahaq_4018 Rahnella sp. Y9602 3-dehydroquinate dehydratase YP_004214733.1 4373955 D 741091 CDS YP_004214734.1 322834707 10215053 4374440..4374904 1 NC_015061.1 KEGG: spe:Spro_4417 acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein 4374904 10215053 Rahaq_4019 Rahnella sp. Y9602 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_004214734.1 4374440 D 741091 CDS YP_004214735.1 322834708 10215054 4374916..4376265 1 NC_015061.1 KEGG: spe:Spro_4418 acetyl-CoA carboxylase biotin carboxylase subunit; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; acetyl-CoA carboxylase, biotin carboxylase 4376265 10215054 Rahaq_4020 Rahnella sp. Y9602 acetyl-CoA carboxylase, biotin carboxylase YP_004214735.1 4374916 D 741091 CDS YP_004214736.1 322834709 10215055 4376345..4376593 1 NC_015061.1 PFAM: protein of unknown function DUF997; KEGG: ebi:EbC_40800 inner membrane protein; hypothetical protein 4376593 10215055 Rahaq_4021 Rahnella sp. Y9602 hypothetical protein YP_004214736.1 4376345 D 741091 CDS YP_004214737.1 322834710 10215056 4376583..4378028 1 NC_015061.1 KEGG: spe:Spro_4420 sodium/panthothenate symporter; TIGRFAM: sodium/pantothenate symporter; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; sodium/pantothenate symporter 4378028 10215056 Rahaq_4022 Rahnella sp. Y9602 sodium/pantothenate symporter YP_004214737.1 4376583 D 741091 CDS YP_004214738.1 322834711 10215057 4378072..4378956 1 NC_015061.1 KEGG: yen:YE3815 ribosomal protein L11 methyltransferase; TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase; 50S ribosomal protein L11 methyltransferase 4378956 10215057 Rahaq_4023 Rahnella sp. Y9602 50S ribosomal protein L11 methyltransferase YP_004214738.1 4378072 D 741091 CDS YP_004214739.1 322834712 10215058 4379117..4379854 1 NC_015061.1 KEGG: pwa:Pecwa_0242 carbonic anhydrase; PFAM: carbonic anhydrase; carbonate dehydratase 4379854 10215058 Rahaq_4024 Rahnella sp. Y9602 carbonate dehydratase YP_004214739.1 4379117 D 741091 CDS YP_004214740.1 322834713 10215059 4380244..4381209 1 NC_015061.1 KEGG: spe:Spro_4423 tRNA-dihydrouridine synthase B; TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; nifR3 family TIM-barrel protein 4381209 10215059 Rahaq_4025 Rahnella sp. Y9602 nifR3 family TIM-barrel protein YP_004214740.1 4380244 D 741091 CDS YP_004214741.1 322834714 10215060 4381231..4381527 1 NC_015061.1 PFAM: helix-turn-helix Fis-type; KEGG: etr:ETAE_3152 DNA-binding protein fis; Fis family transcriptional regulator 4381527 10215060 Rahaq_4026 Rahnella sp. Y9602 Fis family transcriptional regulator YP_004214741.1 4381231 D 741091 CDS YP_004214742.1 322834715 10215061 4381728..4382156 1 NC_015061.1 PFAM: DoxX family protein; KEGG: dze:Dd1591_1247 DoxX family protein; DoxX family protein 4382156 10215061 Rahaq_4027 Rahnella sp. Y9602 DoxX family protein YP_004214742.1 4381728 D 741091 CDS YP_004214743.1 322834716 10215062 4382577..4383497 1 NC_015061.1 KEGG: yen:YE3829 lipid A biosynthesis palmitoleoyl acyltransferase; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: lipid A biosynthesis acyltransferase; lipid A biosynthesis lauroyl acyltransferase 4383497 10215062 Rahaq_4028 Rahnella sp. Y9602 lipid A biosynthesis lauroyl acyltransferase YP_004214743.1 4382577 D 741091 CDS YP_004214744.1 322834717 10215063 4383584..4383769 1 NC_015061.1 KEGG: pst:PSPTOA0058 hypothetical protein; hypothetical protein 4383769 10215063 Rahaq_4029 Rahnella sp. Y9602 hypothetical protein YP_004214744.1 4383584 D 741091 CDS YP_004214745.1 322834718 10215064 4384186..4385211 1 NC_015061.1 KEGG: yen:YE3833 ABC transporter periplasmic solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 4385211 10215064 Rahaq_4030 Rahnella sp. Y9602 family 3 extracellular solute-binding protein YP_004214745.1 4384186 D 741091 CDS YP_004214746.1 322834719 10215065 4385315..4386493 1 NC_015061.1 KEGG: yen:YE3834 ABC transporter permease; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 4386493 10215065 Rahaq_4031 Rahnella sp. Y9602 polar amino acid ABC transporter inner membrane subunit YP_004214746.1 4385315 D 741091 CDS YP_004214747.1 322834720 10215066 4386539..4387612 1 NC_015061.1 KEGG: yen:YE3835 ABC transporter permease; TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 4387612 10215066 Rahaq_4032 Rahnella sp. Y9602 polar amino acid ABC transporter inner membrane subunit YP_004214747.1 4386539 D 741091 CDS YP_004214748.1 322834721 10215067 4387621..4388382 1 NC_015061.1 KEGG: yen:YE3836 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 4388382 10215067 Rahaq_4033 Rahnella sp. Y9602 ABC transporter YP_004214748.1 4387621 D 741091 CDS YP_004214749.1 322834722 10215068 complement(4388775..4389464) 1 NC_015061.1 PFAM: LrgB family protein; KEGG: spe:Spro_4427 LrgB family protein; LrgB family protein 4389464 10215068 Rahaq_4034 Rahnella sp. Y9602 LrgB family protein YP_004214749.1 4388775 R 741091 CDS YP_004214750.1 322834723 10215069 complement(4389457..4389879) 1 NC_015061.1 PFAM: LrgA family protein; KEGG: spe:Spro_4428 LrgA family protein; LrgA family protein 4389879 10215069 Rahaq_4035 Rahnella sp. Y9602 LrgA family protein YP_004214750.1 4389457 R 741091 CDS YP_004214751.1 322834724 10215070 4390024..4390902 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: yen:YE3838 LysR family transcriptional regulator; LysR family transcriptional regulator 4390902 10215070 Rahaq_4036 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004214751.1 4390024 D 741091 CDS YP_004214752.1 322834725 10215071 complement(4390961..4392610) 1 NC_015061.1 KEGG: spe:Spro_4430 Na+/H+ antiporter; TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; Na+/H+ antiporter 4392610 10215071 Rahaq_4037 Rahnella sp. Y9602 Na+/H+ antiporter YP_004214752.1 4390961 R 741091 CDS YP_004214753.1 322834726 10215072 complement(4392879..4394246) 1 NC_015061.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: spe:Spro_4431 xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease 4394246 10215072 Rahaq_4038 Rahnella sp. Y9602 xanthine/uracil/vitamin C permease YP_004214753.1 4392879 R 741091 CDS YP_004214754.1 322834727 10215073 complement(4394656..4395324) 1 NC_015061.1 PFAM: Glutathione S-transferase domain; KEGG: yen:YE3841 glutathione S transferase; glutathione S-transferase 4395324 10215073 Rahaq_4039 Rahnella sp. Y9602 glutathione S-transferase YP_004214754.1 4394656 R 741091 CDS YP_004214755.1 322834728 10215074 4395593..4397686 1 NC_015061.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; MHYT domain protein; KEGG: ebi:EbC_38160 diguanylate cyclase (GGDEF domain); SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase with MHYT sensor 4397686 10215074 Rahaq_4040 Rahnella sp. Y9602 diguanylate cyclase/phosphodiesterase with MHYT sensor YP_004214755.1 4395593 D 741091 CDS YP_004214756.1 322834729 10215075 complement(4397697..4399259) 1 NC_015061.1 KEGG: ddd:Dda3937_02872 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4399259 10215075 Rahaq_4041 Rahnella sp. Y9602 methyl-accepting chemotaxis sensory transducer YP_004214756.1 4397697 R 741091 CDS YP_004214757.1 322834730 10215076 complement(4399495..4400298) 1 NC_015061.1 PFAM: inositol monophosphatase; KEGG: atu:Atu4573 inositol monophosphatase family protein; inositol monophosphatase 4400298 10215076 Rahaq_4042 Rahnella sp. Y9602 inositol monophosphatase YP_004214757.1 4399495 R 741091 CDS YP_004214758.1 322834731 10215077 4400456..4401088 1 NC_015061.1 PFAM: lysine exporter protein (LYSE/YGGA); KEGG: ppg:PputGB1_2255 lysine exporter protein LysE/YggA; lysine exporter protein LysE/YggA 4401088 10215077 Rahaq_4043 Rahnella sp. Y9602 lysine exporter protein LysE/YggA YP_004214758.1 4400456 D 741091 CDS YP_004214759.1 322834732 10215078 4401170..4402258 1 NC_015061.1 PFAM: periplasmic binding protein; KEGG: ebi:EbC_34640 ABC transporter solute-binding protein; periplasmic binding protein 4402258 10215078 Rahaq_4044 Rahnella sp. Y9602 periplasmic binding protein YP_004214759.1 4401170 D 741091 CDS YP_004214760.1 322834733 10215079 4402306..4403046 1 NC_015061.1 KEGG: ebi:EbC_34650 molybdenum ABC transporter periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; molybdenum ABC transporter periplasmic molybdate-binding protein 4403046 10215079 Rahaq_4045 Rahnella sp. Y9602 molybdenum ABC transporter periplasmic molybdate-binding protein YP_004214760.1 4402306 D 741091 CDS YP_004214761.1 322834734 10215080 complement(4403075..4403932) 1 NC_015061.1 KEGG: ebi:EbC_34320 kinase; PFAM: RIO-like kinase; SMART: protein of unknown function RIO1; RIO-like kinase 4403932 10215080 Rahaq_4046 Rahnella sp. Y9602 RIO-like kinase YP_004214761.1 4403075 R 741091 CDS YP_004214762.1 322834735 10215081 4404380..4405495 1 NC_015061.1 PFAM: Male sterility domain; KEGG: ctu:Ctu_33390 hypothetical protein; hypothetical protein 4405495 10215081 Rahaq_4047 Rahnella sp. Y9602 hypothetical protein YP_004214762.1 4404380 D 741091 CDS YP_004214763.1 322834736 10215082 complement(4405642..4406265) 1 NC_015061.1 PFAM: Glutathione S-transferase domain; KEGG: enc:ECL_02211 glutathione S-transferase domain protein; glutathione S-transferase 4406265 10215082 Rahaq_4048 Rahnella sp. Y9602 glutathione S-transferase YP_004214763.1 4405642 R 741091 CDS YP_004214764.1 322834737 10215083 complement(4406301..4406834) 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mxa:MXAN_5306 acetyltransferase; N-acetyltransferase GCN5 4406834 10215083 Rahaq_4049 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004214764.1 4406301 R 741091 CDS YP_004214765.1 322834738 10215084 complement(4406920..4407831) 1 NC_015061.1 KEGG: yen:YE1743 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 4407831 10215084 Rahaq_4050 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004214765.1 4406920 R 741091 CDS YP_004214766.1 322834739 10215085 4407987..4408892 1 NC_015061.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: yen:YE1742 inner membrane protein; hypothetical protein 4408892 10215085 Rahaq_4051 Rahnella sp. Y9602 hypothetical protein YP_004214766.1 4407987 D 741091 CDS YP_004214767.1 322834740 10215086 4409008..4409388 1 NC_015061.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: msl:Msil_3211 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 4409388 10215086 Rahaq_4052 Rahnella sp. Y9602 4-oxalocrotonate tautomerase YP_004214767.1 4409008 D 741091 CDS YP_004214768.1 322834741 10215087 complement(4409410..4409754) 1 NC_015061.1 PFAM: PemK family protein; KEGG: aat:D11S_0906 transcriptional modulator of MazE/toxin, MazF; transcriptional modulator of MazE/toxin MazF 4409754 10215087 Rahaq_4053 Rahnella sp. Y9602 transcriptional modulator of MazE/toxin MazF YP_004214768.1 4409410 R 741091 CDS YP_004214769.1 322834742 10215088 complement(4409754..4410002) 1 NC_015061.1 KEGG: yen:YE1273 hypothetical protein; hypothetical protein 4410002 10215088 Rahaq_4054 Rahnella sp. Y9602 hypothetical protein YP_004214769.1 4409754 R 741091 CDS YP_004214770.1 322834743 10215089 complement(4410125..4410865) 1 NC_015061.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: spe:Spro_3727 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4410865 10215089 Rahaq_4055 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004214770.1 4410125 R 741091 CDS YP_004214771.1 322834744 10215090 4410987..4411889 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3728 LysR family transcriptional regulator; LysR family transcriptional regulator 4411889 10215090 Rahaq_4056 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004214771.1 4410987 D 741091 CDS YP_004214772.1 322834745 10215091 4411944..4412429 1 NC_015061.1 KEGG: pct:PC1_1536 hypothetical protein; hypothetical protein 4412429 10215091 Rahaq_4057 Rahnella sp. Y9602 hypothetical protein YP_004214772.1 4411944 D 741091 CDS YP_004214773.1 322834746 10215092 complement(4412467..4414053) 1 NC_015061.1 KEGG: mms:mma_1885 hypothetical protein; hypothetical protein 4414053 10215092 Rahaq_4058 Rahnella sp. Y9602 hypothetical protein YP_004214773.1 4412467 R 741091 CDS YP_004214774.1 322834747 10215093 complement(4414179..4415336) 1 NC_015061.1 PFAM: FAD dependent oxidoreductase; KEGG: spe:Spro_2318 monooxygenase FAD-binding; FAD dependent oxidoreductase 4415336 10215093 Rahaq_4059 Rahnella sp. Y9602 FAD dependent oxidoreductase YP_004214774.1 4414179 R 741091 CDS YP_004214775.1 322834748 10215094 complement(4415637..4417574) 1 NC_015061.1 PFAM: metallophosphoesterase; KEGG: cro:ROD_32251 hypothetical protein; metallophosphoesterase 4417574 10215094 Rahaq_4060 Rahnella sp. Y9602 metallophosphoesterase YP_004214775.1 4415637 R 741091 CDS YP_004214776.1 322834749 10215095 complement(4417830..4418519) 1 NC_015061.1 TIGRFAM: cysteine protease domain protein, YopT-type; KEGG: hsm:HSM_1489 cysteine protease domain-containing protein; cysteine protease domain protein, YopT-type 4418519 10215095 Rahaq_4061 Rahnella sp. Y9602 cysteine protease domain protein, YopT-type YP_004214776.1 4417830 R 741091 CDS YP_004214777.1 322834750 10215096 4418726..4419580 1 NC_015061.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: spe:Spro_0105 LysR family transcriptional regulator; LysR family transcriptional regulator 4419580 10215096 Rahaq_4062 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004214777.1 4418726 D 741091 CDS YP_004214778.1 322834751 10215097 4419676..4421094 1 NC_015061.1 PFAM: Amidohydrolase 3; KEGG: ebi:EbC_35430 amidohydrolase 3; amidohydrolase 4421094 10215097 Rahaq_4063 Rahnella sp. Y9602 amidohydrolase YP_004214778.1 4419676 D 741091 CDS YP_004214779.1 322834752 10215098 complement(4421182..4421724) 1 NC_015061.1 KEGG: spe:Spro_4439 single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein 4421724 10215098 Rahaq_4064 Rahnella sp. Y9602 single-strand binding protein YP_004214779.1 4421182 R 741091 CDS YP_004214780.1 322834753 10215099 4422051..4424906 1 NC_015061.1 KEGG: spe:Spro_4440 excinuclease ABC subunit A; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; excinuclease ABC subunit A 4424906 10215099 Rahaq_4065 Rahnella sp. Y9602 excinuclease ABC subunit A YP_004214780.1 4422051 D 741091 CDS YP_004214781.1 322834754 10215100 complement(4424957..4425712) 1 NC_015061.1 KEGG: gca:Galf_0377 hypothetical protein; hypothetical protein 4425712 10215100 Rahaq_4066 Rahnella sp. Y9602 hypothetical protein YP_004214781.1 4424957 R 741091 CDS YP_004214782.1 322834755 10215101 complement(4425691..4426731) 1 NC_015061.1 KEGG: vap:Vapar_2240 hypothetical protein; hypothetical protein 4426731 10215101 Rahaq_4067 Rahnella sp. Y9602 hypothetical protein YP_004214782.1 4425691 R 741091 CDS YP_004214783.1 322834756 10215102 complement(4426813..4427994) 1 NC_015061.1 PFAM: glycoside hydrolase family 13 domain protein; esterase; KEGG: dze:Dd1591_1707 esterase; glycoside hydrolase 4427994 10215102 Rahaq_4068 Rahnella sp. Y9602 glycoside hydrolase YP_004214783.1 4426813 R 741091 CDS YP_004214784.1 322834757 10215103 complement(4428110..4429027) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3091 LysR family transcriptional regulator; LysR family transcriptional regulator 4429027 10215103 Rahaq_4069 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004214784.1 4428110 R 741091 CDS YP_004214785.1 322834758 10215104 4429129..4429749 1 NC_015061.1 PFAM: Glutathione S-transferase domain; KEGG: spe:Spro_3092 glutathione S-transferase domain-containing protein; glutathione S-transferase 4429749 10215104 Rahaq_4070 Rahnella sp. Y9602 glutathione S-transferase YP_004214785.1 4429129 D 741091 CDS YP_004214786.1 322834759 10215105 4429756..4430676 1 NC_015061.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: spe:Spro_3093 pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 4430676 10215105 Rahaq_4071 Rahnella sp. Y9602 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_004214786.1 4429756 D 741091 CDS YP_004214787.1 322834760 10215106 complement(4430658..4431011) 1 NC_015061.1 KEGG: spe:Spro_4443 hypothetical protein; hypothetical protein 4431011 10215106 Rahaq_4072 Rahnella sp. Y9602 hypothetical protein YP_004214787.1 4430658 R 741091 CDS YP_004214788.1 322834761 10215107 complement(4431089..4432504) 1 NC_015061.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: enc:ECL_05108 glycoside/pentoside/hexuronide:cation symporter; sugar (Glycoside-Pentoside-Hexuronide) transporter 4432504 10215107 Rahaq_4073 Rahnella sp. Y9602 sugar (Glycoside-Pentoside-Hexuronide) transporter YP_004214788.1 4431089 R 741091 CDS YP_004214789.1 322834762 10215108 complement(4432551..4433936) 1 NC_015061.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: cko:CKO_03136 hypothetical protein; sugar (Glycoside-Pentoside-Hexuronide) transporter 4433936 10215108 Rahaq_4074 Rahnella sp. Y9602 sugar (Glycoside-Pentoside-Hexuronide) transporter YP_004214789.1 4432551 R 741091 CDS YP_004214790.1 322834763 10215109 complement(4433992..4436028) 1 NC_015061.1 PFAM: glycoside hydrolase family 31; KEGG: sed:SeD_A4407 alpha-glucosidase; glycoside hydrolase 4436028 10215109 Rahaq_4075 Rahnella sp. Y9602 glycoside hydrolase YP_004214790.1 4433992 R 741091 CDS YP_004214791.1 322834764 10215110 complement(4436046..4437287) 1 NC_015061.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: cko:CKO_03133 hypothetical protein; N-acylglucosamine 2-epimerase 4437287 10215110 Rahaq_4076 Rahnella sp. Y9602 N-acylglucosamine 2-epimerase YP_004214791.1 4436046 R 741091 CDS YP_004214792.1 322834765 10215111 complement(4437303..4438181) 1 NC_015061.1 PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: ect:ECIAI39_3119 aldolase; deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase 4438181 10215111 Rahaq_4077 Rahnella sp. Y9602 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_004214792.1 4437303 R 741091 CDS YP_004214793.1 322834766 10215112 complement(4438204..4439100) 1 NC_015061.1 KEGG: cro:ROD_38791 phosphogluconate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyisobutyrate dehydrogenase 4439100 10215112 Rahaq_4078 Rahnella sp. Y9602 3-hydroxyisobutyrate dehydrogenase YP_004214793.1 4438204 R 741091 CDS YP_004214794.1 322834767 10215113 4439272..4440168 1 NC_015061.1 PFAM: PfkB domain protein; KEGG: cro:ROD_38781 sugar kinase; PfkB domain-containing protein 4440168 10215113 Rahaq_4079 Rahnella sp. Y9602 PfkB domain-containing protein YP_004214794.1 4439272 D 741091 CDS YP_004214795.1 322834768 10215114 4440205..4440990 1 NC_015061.1 KEGG: cko:CKO_03129 hypothetical protein; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator 4440990 10215114 Rahaq_4080 Rahnella sp. Y9602 DeoR family transcriptional regulator YP_004214795.1 4440205 D 741091 CDS YP_004214796.1 322834769 10215115 complement(4441094..4442287) 1 NC_015061.1 PFAM: aminotransferase class I and II; KEGG: dze:Dd1591_0702 aromatic amino acid aminotransferase; class I and II aminotransferase 4442287 10215115 Rahaq_4081 Rahnella sp. Y9602 class I and II aminotransferase YP_004214796.1 4441094 R 741091 CDS YP_004214797.1 322834770 10215116 4442513..4442716 1 NC_015061.1 KEGG: pag:PLES_01831 3-ketoacyl-(acyl-carrier-protein) reductase; 3-ketoacyl-ACP reductase 4442716 10215116 Rahaq_4082 Rahnella sp. Y9602 3-ketoacyl-ACP reductase YP_004214797.1 4442513 D 741091 CDS YP_004214798.1 322834771 10215117 complement(4442778..4443410) 1 NC_015061.1 PFAM: protein of unknown function DUF161; KEGG: eca:ECA3669 hypothetical protein; hypothetical protein 4443410 10215117 Rahaq_4083 Rahnella sp. Y9602 hypothetical protein YP_004214798.1 4442778 R 741091 CDS YP_004214799.1 322834772 10215118 complement(4443656..4444120) 1 NC_015061.1 KEGG: eca:ECA3668 transcription regulator AsnC; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 4444120 10215118 Rahaq_4084 Rahnella sp. Y9602 AsnC family transcriptional regulator YP_004214799.1 4443656 R 741091 CDS YP_004214800.1 322834773 10215119 4444255..4445034 1 NC_015061.1 PFAM: extracellular solute-binding protein family 3; KEGG: spe:Spro_4447 arogenate dehydratase; SMART: extracellular solute-binding protein family 3; arogenate dehydratase 4445034 10215119 Rahaq_4085 Rahnella sp. Y9602 arogenate dehydratase YP_004214800.1 4444255 D 741091 CDS YP_004214801.1 322834774 10215120 complement(4445038..4446117) 1 NC_015061.1 TIGRFAM: alanine racemase; KEGG: spe:Spro_4448 alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 4446117 10215120 Rahaq_4086 Rahnella sp. Y9602 alanine racemase YP_004214801.1 4445038 R 741091 CDS YP_004214802.1 322834775 10215121 complement(4446304..4447710) 1 NC_015061.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: ypi:YpsIP31758_3765 replicative DNA helicase; SMART: AAA ATPase; replicative DNA helicase 4447710 10215121 Rahaq_4087 Rahnella sp. Y9602 replicative DNA helicase YP_004214802.1 4446304 R 741091 CDS YP_004214803.1 322834776 10215122 4447893..4448876 1 NC_015061.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: spe:Spro_4450 quinone oxidoreductase, NADPH-dependent; alcohol dehydrogenase 4448876 10215122 Rahaq_4088 Rahnella sp. Y9602 alcohol dehydrogenase YP_004214803.1 4447893 D 741091 CDS YP_004214804.1 322834777 10215123 complement(4449273..4449509) 1 NC_015061.1 KEGG: ecz:ECS88_4522 phage shock protein G; TIGRFAM: phage shock protein G; PFAM: shock protein G; phage shock protein G 4449509 10215123 Rahaq_4089 Rahnella sp. Y9602 phage shock protein G YP_004214804.1 4449273 R 741091 CDS YP_004214805.1 322834778 10215124 complement(4449702..4450709) 1 NC_015061.1 KEGG: epy:EpC_33170 tRNA-dihydrouridine synthase A; TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS; yjbN family TIM-barrel protein 4450709 10215124 Rahaq_4090 Rahnella sp. Y9602 yjbN family TIM-barrel protein YP_004214805.1 4449702 R 741091 CDS YP_004214806.1 322834779 10215125 4450928..4451482 1 NC_015061.1 PFAM: ferric-uptake regulator; KEGG: yen:YE3853 zinc uptake transcriptional repressor; ferric uptake regulator family protein 4451482 10215125 Rahaq_4091 Rahnella sp. Y9602 ferric uptake regulator family protein YP_004214806.1 4450928 D 741091 CDS YP_004214807.1 322834780 10215126 complement(4451641..4451850) 1 NC_015061.1 PFAM: CsbD family protein; KEGG: sdy:SDY_4529 stress-response protein; CsbD family protein 4451850 10215126 Rahaq_4092 Rahnella sp. Y9602 CsbD family protein YP_004214807.1 4451641 R 741091 CDS YP_004214808.1 322834781 10215127 complement(4452040..4453404) 1 NC_015061.1 KEGG: spe:Spro_4459 DNA-damage-inducible SOS response protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 4453404 10215127 Rahaq_4093 Rahnella sp. Y9602 MATE efflux family protein YP_004214808.1 4452040 R 741091 CDS YP_004214809.1 322834782 10215128 complement(4453702..4454310) 1 NC_015061.1 KEGG: yen:YE3855 LexA repressor; TIGRFAM: LexA repressor; PFAM: LexA DNA-binding domain protein; Peptidase S24/S26A/S26B, conserved region; LexA family transcriptional regulator 4454310 10215128 Rahaq_4094 Rahnella sp. Y9602 LexA family transcriptional regulator YP_004214809.1 4453702 R 741091 CDS YP_004214810.1 322834783 10215129 complement(4454430..4454798) 1 NC_015061.1 PFAM: diacylglycerol kinase; KEGG: ctu:Ctu_37730 diacylglycerol kinase; diacylglycerol kinase 4454798 10215129 Rahaq_4095 Rahnella sp. Y9602 diacylglycerol kinase YP_004214810.1 4454430 R 741091 CDS YP_004214811.1 322834784 10215130 4454916..4457399 1 NC_015061.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: spe:Spro_4462 glycerol-3-phosphate acyltransferase; SMART: phospholipid/glycerol acyltransferase; glycerol-3-phosphate O-acyltransferase 4457399 10215130 Rahaq_4096 Rahnella sp. Y9602 glycerol-3-phosphate O-acyltransferase YP_004214811.1 4454916 D 741091 CDS YP_004214812.1 322834785 10215131 complement(4457497..4458408) 1 NC_015061.1 KEGG: ebi:EbC_03050 4-hydroxybenzoate octaprenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; 4-hydroxybenzoate polyprenyltransferase 4458408 10215131 Rahaq_4097 Rahnella sp. Y9602 4-hydroxybenzoate polyprenyltransferase YP_004214812.1 4457497 R 741091 CDS YP_004214813.1 322834786 10215132 complement(4458405..4458944) 1 NC_015061.1 KEGG: xbo:XBJ1_4001 chorismate pyruvate lyase; PFAM: Chorismate lyase; chorismate lyase 4458944 10215132 Rahaq_4098 Rahnella sp. Y9602 chorismate lyase YP_004214813.1 4458405 R 741091 CDS YP_004214814.1 322834787 10215133 complement(4459034..4459441) 1 NC_015061.1 PFAM: Phosphate-starvation-inducible E-like; KEGG: spe:Spro_4475 phosphate-starvation-inducible protein PsiE; Phosphate-starvation-inducible E-like protein 4459441 10215133 Rahaq_4099 Rahnella sp. Y9602 Phosphate-starvation-inducible E-like protein YP_004214814.1 4459034 R 741091 CDS YP_004214815.1 322834788 10215134 complement(4459692..4461338) 1 NC_015061.1 KEGG: spe:Spro_4477 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); glucose-6-phosphate isomerase 4461338 10215134 Rahaq_4100 Rahnella sp. Y9602 glucose-6-phosphate isomerase YP_004214815.1 4459692 R 741091 CDS YP_004214816.1 322834789 10215135 4461863..4463251 1 NC_015061.1 TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; KEGG: spe:Spro_4479 aspartate kinase III; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; aspartate kinase 4463251 10215135 Rahaq_4101 Rahnella sp. Y9602 aspartate kinase YP_004214816.1 4461863 D 741091 CDS YP_004214817.1 322834790 10215136 4463342..4464259 1 NC_015061.1 PFAM: Bile acid:sodium symporter; KEGG: spe:Spro_4480 bile acid:sodium symporter; bile acid:sodium symporter 4464259 10215136 Rahaq_4102 Rahnella sp. Y9602 bile acid:sodium symporter YP_004214817.1 4463342 D 741091 CDS YP_004214818.1 322834791 10215137 complement(4464325..4465977) 1 NC_015061.1 KEGG: spe:Spro_4483 sodium-dependent inorganic phosphate (Pi) transporter; TIGRFAM: sodium-dependent inorganic phosphate (Pi) transporter; Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein; sodium-dependent inorganic phosphate (Pi) transporter 4465977 10215137 Rahaq_4103 Rahnella sp. Y9602 sodium-dependent inorganic phosphate (Pi) transporter YP_004214818.1 4464325 R 741091 CDS YP_004214819.1 322834792 10215138 complement(4465993..4466649) 1 NC_015061.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: pap:PSPA7_1870 hypothetical protein; HAD-superfamily hydrolase 4466649 10215138 Rahaq_4104 Rahnella sp. Y9602 HAD-superfamily hydrolase YP_004214819.1 4465993 R 741091 CDS YP_004214820.1 322834793 10215139 complement(4466646..4467638) 1 NC_015061.1 KEGG: ebi:EbC_02940 ABC transporter ATP binding component; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter 4467638 10215139 Rahaq_4105 Rahnella sp. Y9602 ABC transporter YP_004214820.1 4466646 R 741091 CDS YP_004214821.1 322834794 10215140 complement(4467641..4468426) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_4485 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4468426 10215140 Rahaq_4106 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004214821.1 4467641 R 741091 CDS YP_004214822.1 322834795 10215141 complement(4468449..4469291) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_4486 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4469291 10215141 Rahaq_4107 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004214822.1 4468449 R 741091 CDS YP_004214823.1 322834796 10215142 complement(4469318..4470115) 1 NC_015061.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: spe:Spro_4487 hypothetical protein; type I phosphodiesterase/nucleotide pyrophosphatase 4470115 10215142 Rahaq_4108 Rahnella sp. Y9602 type I phosphodiesterase/nucleotide pyrophosphatase YP_004214823.1 4469318 R 741091 CDS YP_004214824.1 322834797 10215143 complement(4470197..4471255) 1 NC_015061.1 PFAM: extracellular solute-binding protein family 1; KEGG: spe:Spro_4488 extracellular solute-binding protein; extracellular solute-binding protein 4471255 10215143 Rahaq_4109 Rahnella sp. Y9602 extracellular solute-binding protein YP_004214824.1 4470197 R 741091 CDS YP_004214825.1 322834798 10215144 4471458..4472168 1 NC_015061.1 KEGG: spe:Spro_4489 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 4472168 10215144 Rahaq_4110 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004214825.1 4471458 D 741091 CDS YP_004214826.1 322834799 10215145 complement(4472318..4476019) 1 NC_015061.1 KEGG: yen:YE3875 B12-dependent methionine synthase; TIGRFAM: methionine synthase; PFAM: homocysteine S-methyltransferase; dihydropteroate synthase DHPS; methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; Vitamin B12 dependent methionine synthase activation region; methionine synthase 4476019 10215145 Rahaq_4111 Rahnella sp. Y9602 methionine synthase YP_004214826.1 4472318 R 741091 CDS YP_004214827.1 322834800 10215146 4476267..4477109 1 NC_015061.1 KEGG: yen:YE3876 transcriptional repressor IclR; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; IclR family transcriptional regulator 4477109 10215146 Rahaq_4112 Rahnella sp. Y9602 IclR family transcriptional regulator YP_004214827.1 4476267 D 741091 CDS YP_004214828.1 322834801 10215147 complement(4477155..4478867) 1 NC_015061.1 KEGG: spe:Spro_4501 bifunctional isocitrate dehydrogenase kinase/phosphatase protein; PFAM: Isocitrate dehydrogenase kinasephosphatase; (isocitrate dehydrogenase) kinase 4478867 10215147 Rahaq_4113 Rahnella sp. Y9602 (isocitrate dehydrogenase) kinase YP_004214828.1 4477155 R 741091 CDS YP_004214829.1 322834802 10215148 complement(4478920..4480242) 1 NC_015061.1 KEGG: ypb:YPTS_3842 isocitrate lyase; TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; isocitrate lyase 4480242 10215148 Rahaq_4114 Rahnella sp. Y9602 isocitrate lyase YP_004214829.1 4478920 R 741091 CDS YP_004214830.1 322834803 10215149 complement(4480282..4481880) 1 NC_015061.1 TIGRFAM: malate synthase A; KEGG: spe:Spro_4503 malate synthase; PFAM: Malate synthase family protein; malate synthase A 4481880 10215149 Rahaq_4115 Rahnella sp. Y9602 malate synthase A YP_004214830.1 4480282 R 741091 CDS YP_004214831.1 322834804 10215150 complement(4482255..4483184) 1 NC_015061.1 TIGRFAM: homoserine O-succinyltransferase; KEGG: pct:PC1_3780 homoserine O-succinyltransferase; PFAM: homoserine O-succinyltransferase; homoserine O-succinyltransferase 4483184 10215150 Rahaq_4116 Rahnella sp. Y9602 homoserine O-succinyltransferase YP_004214831.1 4482255 R 741091 CDS YP_004214832.1 322834805 10215155 4489274..4490863 1 NC_015061.1 SMART: AICARFT/IMPCHase bienzyme formylation region; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; KEGG: ypb:YPTS_0321 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 4490863 10215155 Rahaq_4117 Rahnella sp. Y9602 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_004214832.1 4489274 D 741091 CDS YP_004214833.1 322834806 10215156 4490909..4492198 1 NC_015061.1 TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: yen:YE0302 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; phosphoribosylamine--glycine ligase 4492198 10215156 Rahaq_4118 Rahnella sp. Y9602 phosphoribosylamine--glycine ligase YP_004214833.1 4490909 D 741091 CDS YP_004214834.1 322834807 10215157 complement(4492418..4493113) 1 NC_015061.1 PFAM: protein of unknown function DUF1481; KEGG: yen:YE0301 hypothetical protein; hypothetical protein 4493113 10215157 Rahaq_4119 Rahnella sp. Y9602 hypothetical protein YP_004214834.1 4492418 R 741091 CDS YP_004214835.1 322834808 10215158 complement(4493123..4493395) 1 NC_015061.1 KEGG: spe:Spro_0290 transcriptional regulator HU subunit alpha; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; histone family protein DNA-binding protein 4493395 10215158 Rahaq_4120 Rahnella sp. Y9602 histone family protein DNA-binding protein YP_004214835.1 4493123 R 741091 CDS YP_004214836.1 322834809 10215159 complement(4493586..4494176) 1 NC_015061.1 PFAM: protein of unknown function DUF416; KEGG: spe:Spro_0289 hypothetical protein; hypothetical protein 4494176 10215159 Rahaq_4121 Rahnella sp. Y9602 hypothetical protein YP_004214836.1 4493586 R 741091 CDS YP_004214837.1 322834810 10215160 complement(4494247..4494927) 1 NC_015061.1 KEGG: ddd:Dda3937_00239 endonuclease V (deoxyinosine 3'endoduclease); PFAM: Endonuclease V; Deoxyribonuclease V 4494927 10215160 Rahaq_4122 Rahnella sp. Y9602 Deoxyribonuclease V YP_004214837.1 4494247 R 741091 CDS YP_004214838.1 322834811 10215161 complement(4494937..4496001) 1 NC_015061.1 TIGRFAM: uroporphyrinogen decarboxylase; KEGG: spe:Spro_0287 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase 4496001 10215161 Rahaq_4123 Rahnella sp. Y9602 uroporphyrinogen decarboxylase YP_004214838.1 4494937 R 741091 CDS YP_004214839.1 322834812 10215162 complement(4496073..4496849) 1 NC_015061.1 KEGG: ypb:YPTS_0313 NADH pyrophosphatase; PFAM: NUDIX hydrolase; NADH pyrophosphatase-like ; Zinc ribbon NADH pyrophosphatase; NAD(+) diphosphatase 4496849 10215162 Rahaq_4124 Rahnella sp. Y9602 NAD(+) diphosphatase YP_004214839.1 4496073 R 741091 CDS YP_004214840.1 322834813 10215163 4496949..4497464 1 NC_015061.1 PFAM: regulator of RNA polymerase sigma(70) subunit Rsd/AlgQ; KEGG: yen:YE0295 anti-RNA polymerase sigma 70 factor; regulator of RpoD, Rsd/AlgQ 4497464 10215163 Rahaq_4125 Rahnella sp. Y9602 regulator of RpoD, Rsd/AlgQ YP_004214840.1 4496949 D 741091 CDS YP_004214841.1 322834814 10215164 4497787..4499751 1 NC_015061.1 KEGG: eca:ECA0232 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; thiamine biosynthesis protein ThiC 4499751 10215164 Rahaq_4126 Rahnella sp. Y9602 thiamine biosynthesis protein ThiC YP_004214841.1 4497787 D 741091 CDS YP_004214842.1 322834815 10215165 4499748..4500401 1 NC_015061.1 KEGG: dze:Dd1591_3871 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 4500401 10215165 Rahaq_4127 Rahnella sp. Y9602 thiamine-phosphate pyrophosphorylase YP_004214842.1 4499748 D 741091 CDS YP_004214843.1 322834816 10215166 4500394..4501143 1 NC_015061.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: spe:Spro_0282 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein 4501143 10215166 Rahaq_4128 Rahnella sp. Y9602 UBA/THIF-type NAD/FAD binding protein YP_004214843.1 4500394 D 741091 CDS YP_004214844.1 322834817 10215167 4501140..4501340 1 NC_015061.1 KEGG: spe:Spro_0281 sulfur carrier protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; thiamine biosynthesis protein ThiS 4501340 10215167 Rahaq_4129 Rahnella sp. Y9602 thiamine biosynthesis protein ThiS YP_004214844.1 4501140 D 741091 CDS YP_004214845.1 322834818 10215168 4501342..4502121 1 NC_015061.1 PFAM: thiazole biosynthesis family protein; KEGG: spe:Spro_0280 thiazole synthase; thiazole biosynthesis family protein 4502121 10215168 Rahaq_4130 Rahnella sp. Y9602 thiazole biosynthesis family protein YP_004214845.1 4501342 D 741091 CDS YP_004214846.1 322834819 10215169 4502118..4503296 1 NC_015061.1 KEGG: yen:YE0289 thiamine biosynthesis protein ThiH; TIGRFAM: thiazole biosynthesis protein ThiH; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; thiazole biosynthesis protein ThiH 4503296 10215169 Rahaq_4131 Rahnella sp. Y9602 thiazole biosynthesis protein ThiH YP_004214846.1 4502118 D 741091 CDS YP_004214847.1 322834820 10215170 complement(4503528..4507748) 1 NC_015061.1 TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase subunit alpha; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; KEGG: spe:Spro_0278 DNA-directed RNA polymerase subunit beta'; SMART: RNA polymerase I subunit A domain protein; DNA-directed RNA polymerase subunit beta' 4507748 10215170 Rahaq_4132 Rahnella sp. Y9602 DNA-directed RNA polymerase subunit beta' YP_004214847.1 4503528 R 741091 CDS YP_004214848.1 322834821 10215171 complement(4507840..4511868) 1 NC_015061.1 KEGG: spe:Spro_0277 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, subunit beta; PFAM: RNA polymerase Rpb2 domain 6; DNA-directed RNA polymerase, subunit beta, external 1 domain; RNA polymerase Rpb2 domain 3; RNA polymerase subunit beta; RNA polymerase Rpb2 domain 2; RNA polymerase Rpb2 domain 7; DNA-directed RNA polymerase subunit beta 4511868 10215171 Rahaq_4133 Rahnella sp. Y9602 DNA-directed RNA polymerase subunit beta YP_004214848.1 4507840 R 741091 CDS YP_004214849.1 322834822 10215172 complement(4512201..4512566) 1 NC_015061.1 KEGG: ebi:EbC_02580 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; 50S ribosomal protein L7/L12 4512566 10215172 Rahaq_4134 Rahnella sp. Y9602 50S ribosomal protein L7/L12 YP_004214849.1 4512201 R 741091 CDS YP_004214850.1 322834823 10215173 complement(4512633..4513130) 1 NC_015061.1 PFAM: ribosomal protein L10; KEGG: dze:Dd1591_3887 50S ribosomal protein L10; 50S ribosomal protein L10 4513130 10215173 Rahaq_4135 Rahnella sp. Y9602 50S ribosomal protein L10 YP_004214850.1 4512633 R 741091 CDS YP_004214851.1 322834824 10215174 complement(4513468..4514172) 1 NC_015061.1 KEGG: sdy:SDY_3744 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1; 50S ribosomal protein L1 4514172 10215174 Rahaq_4136 Rahnella sp. Y9602 50S ribosomal protein L1 YP_004214851.1 4513468 R 741091 CDS YP_004214852.1 322834825 10215175 complement(4514176..4514604) 1 NC_015061.1 TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11-like; KEGG: spe:Spro_0273 50S ribosomal protein L11; SMART: ribosomal protein L11; 50S ribosomal protein L11 4514604 10215175 Rahaq_4137 Rahnella sp. Y9602 50S ribosomal protein L11 YP_004214852.1 4514176 R 741091 CDS YP_004214853.1 322834826 10215176 complement(4514780..4515325) 1 NC_015061.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain-containing protein; KOW domain protein; KEGG: sgl:SG0129 transcription antitermination protein NusG; SMART: NGN domain-containing protein; KOW domain protein; NusG antitermination factor 4515325 10215176 Rahaq_4138 Rahnella sp. Y9602 NusG antitermination factor YP_004214853.1 4514780 R 741091 CDS YP_004214854.1 322834827 10215177 complement(4515325..4515708) 1 NC_015061.1 KEGG: spe:Spro_0271 preprotein translocase subunit SecE; TIGRFAM: preprotein translocase SecE subunit; PFAM: protein secE/sec61-gamma protein; preprotein translocase subunit SecE 4515708 10215177 Rahaq_4139 Rahnella sp. Y9602 preprotein translocase subunit SecE YP_004214854.1 4515325 R 741091 CDS YP_004214855.1 322834828 10215178 complement(4515962..4517146) 1 NC_015061.1 KEGG: spe:Spro_4548 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein; translation elongation factor Tu 4517146 10215178 Rahaq_4140 Rahnella sp. Y9602 translation elongation factor Tu YP_004214855.1 4515962 R 741091 CDS YP_004214856.1 322834829 10215183 4518109..4518645 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE0277 acetyltransferase; N-acetyltransferase GCN5 4518645 10215183 Rahaq_4141 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004214856.1 4518109 D 741091 CDS YP_004214857.1 322834830 10215184 4518863..4519813 1 NC_015061.1 KEGG: yen:YE0276 pantothenate kinase; manually curated; TIGRFAM: pantothenate kinase; pantothenate kinase 4519813 10215184 Rahaq_4142 Rahnella sp. Y9602 pantothenate kinase YP_004214857.1 4518863 D 741091 CDS YP_004214858.1 322834831 10215185 complement(4519866..4520825) 1 NC_015061.1 TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; biotin operon repressor; KEGG: yen:YE0275 biotin--protein ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein; bifunctional biotin operon repressor/biotin--acetyl-CoA-carboxylase ligase BirA 4520825 10215185 Rahaq_4143 Rahnella sp. Y9602 bifunctional biotin operon repressor/biotin--acetyl-CoA-carboxylase ligase BirA YP_004214858.1 4519866 R 741091 CDS YP_004214859.1 322834832 10215186 complement(4520822..4521859) 1 NC_015061.1 KEGG: ddc:Dd586_0205 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain-containing protein; FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase 4521859 10215186 Rahaq_4144 Rahnella sp. Y9602 UDP-N-acetylenolpyruvoylglucosamine reductase YP_004214859.1 4520822 R 741091 CDS YP_004214860.1 322834833 10215191 complement(4527586..4528125) 1 NC_015061.1 KEGG: spe:Spro_0266 protoporphyrinogen oxidase; protoporphyrinogen oxidase 4528125 10215191 Rahaq_4145 Rahnella sp. Y9602 protoporphyrinogen oxidase YP_004214860.1 4527586 R 741091 CDS YP_004214861.1 322834834 10215192 complement(4528148..4529599) 1 NC_015061.1 KEGG: ypb:YPTS_0286 potassium transporter; TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; TrkH family potassium uptake protein 4529599 10215192 Rahaq_4146 Rahnella sp. Y9602 TrkH family potassium uptake protein YP_004214861.1 4528148 R 741091 CDS YP_004214862.1 322834835 10215193 complement(4529637..4530248) 1 NC_015061.1 PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; Uncharacterised protein family UPF0029, Impact, C-terminal; KEGG: spe:Spro_0264 hypothetical protein; hypothetical protein 4530248 10215193 Rahaq_4147 Rahnella sp. Y9602 hypothetical protein YP_004214862.1 4529637 R 741091 CDS YP_004214863.1 322834836 10215194 complement(4530248..4531579) 1 NC_015061.1 PFAM: peptidase M24; KEGG: spe:Spro_0263 proline dipeptidase; peptidase M24 4531579 10215194 Rahaq_4148 Rahnella sp. Y9602 peptidase M24 YP_004214863.1 4530248 R 741091 CDS YP_004214864.1 322834837 10215195 4531769..4533961 1 NC_015061.1 KEGG: spe:Spro_0261 multifunctional fatty acid oxidation complex subunit alpha; TIGRFAM: fatty oxidation complex, subunit alpha FadB; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; fatty oxidation complex, subunit alpha FadB 4533961 10215195 Rahaq_4149 Rahnella sp. Y9602 fatty oxidation complex, subunit alpha FadB YP_004214864.1 4531769 D 741091 CDS YP_004214865.1 322834838 10215196 4533973..4535136 1 NC_015061.1 KEGG: spe:Spro_0260 3-ketoacyl-CoA thiolase; TIGRFAM: acetyl-CoA C-acyltransferase FadA; acetyl-CoA acetyltransferase; PFAM: Thiolase-like; acetyl-CoA C-acyltransferase FadA 4535136 10215196 Rahaq_4150 Rahnella sp. Y9602 acetyl-CoA C-acyltransferase FadA YP_004214865.1 4533973 D 741091 CDS YP_004214866.1 322834839 10215197 complement(4535253..4535954) 1 NC_015061.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: spe:Spro_0259 FMN reductase; oxidoreductase FAD/NAD(P)-binding domain-containing protein 4535954 10215197 Rahaq_4151 Rahnella sp. Y9602 oxidoreductase FAD/NAD(P)-binding domain-containing protein YP_004214866.1 4535253 R 741091 CDS YP_004214867.1 322834840 10215198 complement(4536003..4537493) 1 NC_015061.1 KEGG: spe:Spro_0258 3-octaprenyl-4-hydroxybenzoate decarboxylase; TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; UbiD family decarboxylase 4537493 10215198 Rahaq_4152 Rahnella sp. Y9602 UbiD family decarboxylase YP_004214867.1 4536003 R 741091 CDS YP_004214868.1 322834841 10215199 complement(4537688..4538413) 1 NC_015061.1 KEGG: spe:Spro_0257 peptidase E; PFAM: peptidase S51 dipeptidase E; dipeptidase E 4538413 10215199 Rahaq_4153 Rahnella sp. Y9602 dipeptidase E YP_004214868.1 4537688 R 741091 CDS YP_004214869.1 322834842 10215200 4538535..4539074 1 NC_015061.1 TIGRFAM: transcriptional activator RfaH; PFAM: NGN domain-containing protein; KEGG: cko:CKO_00183 transcriptional activator RfaH; SMART: NGN domain-containing protein; transcriptional acivator RfaH 4539074 10215200 Rahaq_4154 Rahnella sp. Y9602 transcriptional acivator RfaH YP_004214869.1 4538535 D 741091 CDS YP_004214870.1 322834843 10215201 complement(4539136..4539927) 1 NC_015061.1 PFAM: TatD-related deoxyribonuclease; KEGG: spe:Spro_0254 DNase TatD; TatD-related deoxyribonuclease 4539927 10215201 Rahaq_4155 Rahnella sp. Y9602 TatD-related deoxyribonuclease YP_004214870.1 4539136 R 741091 CDS YP_004214871.1 322834844 10215202 complement(4539988..4540755) 1 NC_015061.1 KEGG: spe:Spro_0253 twin-arginine protein translocation system subunit TatC; TIGRFAM: Sec-independent protein translocase TatC subunit; PFAM: Sec-independent periplasmic protein translocase; Sec-independent protein translocase subunit TatC 4540755 10215202 Rahaq_4156 Rahnella sp. Y9602 Sec-independent protein translocase subunit TatC YP_004214871.1 4539988 R 741091 CDS YP_004214872.1 322834845 10215203 complement(4540758..4541405) 1 NC_015061.1 TIGRFAM: twin-arginine translocation protein, TatB subunit; KEGG: yen:YE0260 sec-independent protein translocase protein TatB; twin-arginine translocation protein subunit TatB 4541405 10215203 Rahaq_4157 Rahnella sp. Y9602 twin-arginine translocation protein subunit TatB YP_004214872.1 4540758 R 741091 CDS YP_004214873.1 322834846 10215204 complement(4541409..4541675) 1 NC_015061.1 KEGG: ses:SARI_03684 twin arginine translocase protein A; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; twin-arginine translocation protein, TatA/E family subunit 4541675 10215204 Rahaq_4158 Rahnella sp. Y9602 twin-arginine translocation protein, TatA/E family subunit YP_004214873.1 4541409 R 741091 CDS YP_004214874.1 322834847 10215205 complement(4541749..4543380) 1 NC_015061.1 KEGG: spe:Spro_0250 ubiquinone biosynthesis protein UbiB; TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain-containing protein; 2-polyprenylphenol 6-hydroxylase 4543380 10215205 Rahaq_4159 Rahnella sp. Y9602 2-polyprenylphenol 6-hydroxylase YP_004214874.1 4541749 R 741091 CDS YP_004214875.1 322834848 10215206 complement(4543377..4543985) 1 NC_015061.1 PFAM: Sterol-binding domain protein; KEGG: spe:Spro_0249 sterol-binding domain-containing protein; Sterol-binding domain-containing protein 4543985 10215206 Rahaq_4160 Rahnella sp. Y9602 Sterol-binding domain-containing protein YP_004214875.1 4543377 R 741091 CDS YP_004214876.1 322834849 10215207 complement(4543999..4544754) 1 NC_015061.1 KEGG: ypb:YPTS_0271 ubiquinone/menaquinone biosynthesis methyltransferase; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase 4544754 10215207 Rahaq_4161 Rahnella sp. Y9602 ubiquinone/menaquinone biosynthesis methyltransferase YP_004214876.1 4543999 R 741091 CDS YP_004214877.1 322834850 10215208 complement(4544896..4546437) 1 NC_015061.1 PFAM: protein of unknown function DUF195; KEGG: ypb:YPTS_0270 hypothetical protein; hypothetical protein 4546437 10215208 Rahaq_4162 Rahnella sp. Y9602 hypothetical protein YP_004214877.1 4544896 R 741091 CDS YP_004214878.1 322834851 10215209 complement(4546595..4547122) 1 NC_015061.1 KEGG: ypy:YPK_3947 hypothetical protein; hypothetical protein 4547122 10215209 Rahaq_4163 Rahnella sp. Y9602 hypothetical protein YP_004214878.1 4546595 R 741091 CDS YP_004214879.1 322834852 10215210 complement(4547288..4548049) 1 NC_015061.1 KEGG: etr:ETAE_0143 uridine phosphorylase; TIGRFAM: uridine phosphorylase; PFAM: purine or other phosphorylase family 1; uridine phosphorylase 4548049 10215210 Rahaq_4164 Rahnella sp. Y9602 uridine phosphorylase YP_004214879.1 4547288 R 741091 CDS YP_004214880.1 322834853 10215211 complement(4548273..4550615) 1 NC_015061.1 KEGG: ebi:EbC_18710 catalase, hydroxyperoxidase II; PFAM: Catalase related subgroup; Catalase domain protein; catalase 4550615 10215211 Rahaq_4165 Rahnella sp. Y9602 catalase YP_004214880.1 4548273 R 741091 CDS YP_004214881.1 322834854 10215212 4550739..4551566 1 NC_015061.1 KEGG: spe:Spro_0243 carboxymethylenebutenolidase; Carboxymethylenebutenolidase 4551566 10215212 Rahaq_4166 Rahnella sp. Y9602 Carboxymethylenebutenolidase YP_004214881.1 4550739 D 741091 CDS YP_004214882.1 322834855 10215213 complement(4551660..4552322) 1 NC_015061.1 TIGRFAM: transaldolase; KEGG: yen:YE1979 fructose-6-phosphate aldolase; PFAM: Transaldolase; transaldolase 4552322 10215213 Rahaq_4167 Rahnella sp. Y9602 transaldolase YP_004214882.1 4551660 R 741091 CDS YP_004214883.1 322834856 10215214 complement(4552334..4554838) 1 NC_015061.1 KEGG: yps:YPTB0545 PTS family enzyme I phosphohistidine subunit; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; phosphoryl transfer system HPr; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphoenolpyruvate-protein phosphotransferase 4554838 10215214 Rahaq_4168 Rahnella sp. Y9602 phosphoenolpyruvate-protein phosphotransferase YP_004214883.1 4552334 R 741091 CDS YP_004214884.1 322834857 10215215 4555206..4556285 1 NC_015061.1 KEGG: ypy:YPK_3658 fructose-like permease EIIC subunit 2; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; PTS system fructose subfamily transporter subunit IIC 4556285 10215215 Rahaq_4169 Rahnella sp. Y9602 PTS system fructose subfamily transporter subunit IIC YP_004214884.1 4555206 D 741091 CDS YP_004214885.1 322834858 10215216 4556303..4556632 1 NC_015061.1 TIGRFAM: PTS system, fructose-specific, IIB subunnit; KEGG: ypy:YPK_3659 PTS system fructose-like transporter subunit EIIB; PTS system fructose-specific transporter subunit IIB 4556632 10215216 Rahaq_4170 Rahnella sp. Y9602 PTS system fructose-specific transporter subunit IIB YP_004214885.1 4556303 D 741091 CDS YP_004214886.1 322834859 10215217 4556649..4558946 1 NC_015061.1 TIGRFAM: pyruvate formate-lyase; KEGG: ecz:ECS88_4406 formate acetyltransferase 2; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; pyruvate formate-lyase 4558946 10215217 Rahaq_4171 Rahnella sp. Y9602 pyruvate formate-lyase YP_004214886.1 4556649 D 741091 CDS YP_004214887.1 322834860 10215218 4558912..4559799 1 NC_015061.1 TIGRFAM: glycyl-radical enzyme activating protein family; KEGG: kpu:KP1_1988 pyruvate formate lyase II activase; PFAM: Radical SAM domain protein; glycyl-radical enzyme activating protein family 4559799 10215218 Rahaq_4172 Rahnella sp. Y9602 glycyl-radical enzyme activating protein family YP_004214887.1 4558912 D 741091 CDS YP_004214888.1 322834861 10215219 4559824..4560168 1 NC_015061.1 TIGRFAM: PTS system, fructose-specific, IIB subunnit; KEGG: cko:CKO_03041 fructose-like phosphotransferase EIIB subunit 3; PTS system fructose-specific transporter subunit IIB 4560168 10215219 Rahaq_4173 Rahnella sp. Y9602 PTS system fructose-specific transporter subunit IIB YP_004214888.1 4559824 D 741091 CDS YP_004214889.1 322834862 10215220 complement(4560172..4561035) 1 NC_015061.1 KEGG: cko:CKO_03040 hypothetical protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 4561035 10215220 Rahaq_4174 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004214889.1 4560172 R 741091 CDS YP_004214890.1 322834863 10215221 complement(4561333..4563612) 1 NC_015061.1 TIGRFAM: 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; KEGG: spe:Spro_0242 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; PFAM: methionine synthase vitamin-B12 independent; Cobalamin-independent synthase MetE domain protein; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 4563612 10215221 Rahaq_4175 Rahnella sp. Y9602 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_004214890.1 4561333 R 741091 CDS YP_004214891.1 322834864 10215222 4563717..4564652 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ddd:Dda3937_02052 DNA-binding protein transcriptional activator, homocysteine-binding protein; LysR family transcriptional regulator 4564652 10215222 Rahaq_4176 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004214891.1 4563717 D 741091 CDS YP_004214892.1 322834865 10215223 complement(4564558..4565457) 1 NC_015061.1 KEGG: yen:YE0247 hypothetical protein; TIGRFAM: carboxylate/amino acid/amine transporter; PFAM: protein of unknown function DUF6 transmembrane; carboxylate/amino acid/amine transporter 4565457 10215223 Rahaq_4177 Rahnella sp. Y9602 carboxylate/amino acid/amine transporter YP_004214892.1 4564558 R 741091 CDS YP_004214893.1 322834866 10215224 4565671..4565973 1 NC_015061.1 KEGG: ddi:DDB_G0271606 hypothetical protein; hypothetical protein 4565973 10215224 Rahaq_4178 Rahnella sp. Y9602 hypothetical protein YP_004214893.1 4565671 D 741091 CDS YP_004214894.1 322834867 10215225 4566227..4566901 1 NC_015061.1 KEGG: ent:Ent638_2116 hypothetical protein; hypothetical protein 4566901 10215225 Rahaq_4179 Rahnella sp. Y9602 hypothetical protein YP_004214894.1 4566227 D 741091 CDS YP_004214895.1 322834868 10215226 complement(4566953..4567693) 1 NC_015061.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: spe:Spro_0238 cytoplasmic glycerophosphodiester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 4567693 10215226 Rahaq_4180 Rahnella sp. Y9602 glycerophosphoryl diester phosphodiesterase YP_004214895.1 4566953 R 741091 CDS YP_004214896.1 322834869 10215227 complement(4567696..4568769) 1 NC_015061.1 KEGG: spe:Spro_0237 glycerol-3-phosphate transporter ATP-binding subunit; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter 4568769 10215227 Rahaq_4181 Rahnella sp. Y9602 ABC transporter YP_004214896.1 4567696 R 741091 CDS YP_004214897.1 322834870 10215228 complement(4568776..4569621) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE0243 glycerol-3-phosphate transporter membrane protein; binding-protein-dependent transport system inner membrane protein 4569621 10215228 Rahaq_4182 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004214897.1 4568776 R 741091 CDS YP_004214898.1 322834871 10215229 complement(4569618..4570505) 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_0235 glycerol-3-phosphate transporter permease; binding-protein-dependent transport system inner membrane protein 4570505 10215229 Rahaq_4183 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004214898.1 4569618 R 741091 CDS YP_004214899.1 322834872 10215230 complement(4570687..4572000) 1 NC_015061.1 PFAM: extracellular solute-binding protein family 1; KEGG: kpe:KPK_0300 glycerol-3-phosphate transporter periplasmic binding protein; extracellular solute-binding protein 4572000 10215230 Rahaq_4184 Rahnella sp. Y9602 extracellular solute-binding protein YP_004214899.1 4570687 R 741091 CDS YP_004214900.1 322834873 10215231 complement(4572203..4572682) 1 NC_015061.1 KEGG: ses:SARI_03127 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; type VI secretion system effector 4572682 10215231 Rahaq_4185 Rahnella sp. Y9602 type VI secretion system effector YP_004214900.1 4572203 R 741091 CDS YP_004214901.1 322834874 10215232 complement(4572698..4572946) 1 NC_015061.1 KEGG: sua:Saut_0035 heavy metal efflux pump, CzcA family; hypothetical protein 4572946 10215232 Rahaq_4186 Rahnella sp. Y9602 hypothetical protein YP_004214901.1 4572698 R 741091 CDS YP_004214902.1 322834875 10215233 complement(4572933..4573613) 1 NC_015061.1 KEGG: ses:SARI_03125 hypothetical protein; hypothetical protein 4573613 10215233 Rahaq_4187 Rahnella sp. Y9602 hypothetical protein YP_004214902.1 4572933 R 741091 CDS YP_004214903.1 322834876 10215234 complement(4573893..4575080) 1 NC_015061.1 PFAM: aminotransferase class I and II; KEGG: spe:Spro_0233 GntR family transcriptional regulator; GntR family transcriptional regulator 4575080 10215234 Rahaq_4188 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004214903.1 4573893 R 741091 CDS YP_004214904.1 322834877 10215235 complement(4575212..4575913) 1 NC_015061.1 KEGG: pwa:Pecwa_0102 leucine/isoleucine/valine transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 4575913 10215235 Rahaq_4189 Rahnella sp. Y9602 ABC transporter YP_004214904.1 4575212 R 741091 CDS YP_004214905.1 322834878 10215236 complement(4575941..4576711) 1 NC_015061.1 KEGG: yen:YE0233 leucine/isoleucine/valine transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 4576711 10215236 Rahaq_4190 Rahnella sp. Y9602 ABC transporter YP_004214905.1 4575941 R 741091 CDS YP_004214906.1 322834879 10215237 complement(4576708..4577997) 1 NC_015061.1 PFAM: inner-membrane translocator; KEGG: yen:YE0232 leucine/isoleucine/valine transporter permease subunit; inner-membrane translocator 4577997 10215237 Rahaq_4191 Rahnella sp. Y9602 inner-membrane translocator YP_004214906.1 4576708 R 741091 CDS YP_004214907.1 322834880 10215238 complement(4577994..4578920) 1 NC_015061.1 PFAM: inner-membrane translocator; KEGG: ebi:EbC_42440 high-affinity branched-chain amino acid ABC transporter permease protein; inner-membrane translocator 4578920 10215238 Rahaq_4192 Rahnella sp. Y9602 inner-membrane translocator YP_004214907.1 4577994 R 741091 CDS YP_004214908.1 322834881 10215239 complement(4579083..4580195) 1 NC_015061.1 PFAM: Extracellular ligand-binding receptor; KEGG: yen:YE0230 branched-chain amino acid-binding protein; extracellular ligand-binding receptor 4580195 10215239 Rahaq_4193 Rahnella sp. Y9602 extracellular ligand-binding receptor YP_004214908.1 4579083 R 741091 CDS YP_004214909.1 322834882 10215240 4580599..4580979 1 NC_015061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_0227 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4580979 10215240 Rahaq_4194 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004214909.1 4580599 D 741091 CDS YP_004214910.1 322834883 10215241 complement(4581057..4581914) 1 NC_015061.1 KEGG: spe:Spro_0224 RNA polymerase factor sigma-32; TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; RNA polymerase sigma-32 subunit RpoH 4581914 10215241 Rahaq_4195 Rahnella sp. Y9602 RNA polymerase sigma-32 subunit RpoH YP_004214910.1 4581057 R 741091 CDS YP_004214911.1 322834884 10215242 complement(4582232..4583212) 1 NC_015061.1 KEGG: spe:Spro_0223 cell division protein FtsX; TIGRFAM: protein insertion ABC transporter inner membrane subunit FtsX; PFAM: protein of unknown function DUF214; protein insertion ABC transporter inner membrane subunit FtsX 4583212 10215242 Rahaq_4196 Rahnella sp. Y9602 protein insertion ABC transporter inner membrane subunit FtsX YP_004214911.1 4582232 R 741091 CDS YP_004214912.1 322834885 10215243 complement(4583212..4583874) 1 NC_015061.1 TIGRFAM: Type II (General) Secretory Pathway (IISP) Family protein; cell division ATP-binding protein FtsE; PFAM: ABC transporter related; KEGG: sgl:SG0085 cell division protein FtsE; SMART: AAA ATPase; Type II (General) Secretory Pathway (IISP) Family protein 4583874 10215243 Rahaq_4197 Rahnella sp. Y9602 Type II (General) Secretory Pathway (IISP) Family protein YP_004214912.1 4583212 R 741091 CDS YP_004214913.1 322834886 10215244 complement(4583880..4585361) 1 NC_015061.1 TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: spe:Spro_0221 signal recognition particle-docking protein FtsY; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 4585361 10215244 Rahaq_4198 Rahnella sp. Y9602 signal recognition particle-docking protein FtsY YP_004214913.1 4583880 R 741091 CDS YP_004214914.1 322834887 10215245 4585588..4586199 1 NC_015061.1 TIGRFAM: methyltransferase; KEGG: spe:Spro_0220 16S rRNA m(2)G966-methyltransferase; PFAM: Conserved hypothetical protein CHP00095; methyltransferase 4586199 10215245 Rahaq_4199 Rahnella sp. Y9602 methyltransferase YP_004214914.1 4585588 D 741091 CDS YP_004214915.1 322834888 10215246 4586201..4586479 1 NC_015061.1 PFAM: protein of unknown function DUF1145; KEGG: spe:Spro_0219 hypothetical protein; hypothetical protein 4586479 10215246 Rahaq_4200 Rahnella sp. Y9602 hypothetical protein YP_004214915.1 4586201 D 741091 CDS YP_004214916.1 322834889 10215247 4586689..4587315 1 NC_015061.1 PFAM: YhhN family protein; KEGG: spe:Spro_0212 YhhN family protein; hypothetical protein 4587315 10215247 Rahaq_4201 Rahnella sp. Y9602 hypothetical protein YP_004214916.1 4586689 D 741091 CDS YP_004214917.1 322834890 10215248 4587428..4589782 1 NC_015061.1 KEGG: spe:Spro_0209 zinc/cadmium/mercury/lead-transporting ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; heavy metal translocating P-type ATPase 4589782 10215248 Rahaq_4202 Rahnella sp. Y9602 heavy metal translocating P-type ATPase YP_004214917.1 4587428 D 741091 CDS YP_004214918.1 322834891 10215249 complement(4589801..4590061) 1 NC_015061.1 PFAM: SirA-like domain-containing protein; KEGG: esa:ESA_04263 sulfur transfer protein SirA; SirA-like domain-containing protein 4590061 10215249 Rahaq_4203 Rahnella sp. Y9602 SirA-like domain-containing protein YP_004214918.1 4589801 R 741091 CDS YP_004214919.1 322834892 10215250 4590300..4590971 1 NC_015061.1 KEGG: spe:Spro_0204 hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165; hypothetical protein 4590971 10215250 Rahaq_4204 Rahnella sp. Y9602 hypothetical protein YP_004214919.1 4590300 D 741091 CDS YP_004214920.1 322834893 10215251 4591097..4591663 1 NC_015061.1 KEGG: cro:ROD_43451 lipoprotein; lipoprotein 4591663 10215251 Rahaq_4205 Rahnella sp. Y9602 lipoprotein YP_004214920.1 4591097 D 741091 CDS YP_004214921.1 322834894 10215252 4591889..4592581 1 NC_015061.1 KEGG: eta:ETA_32580 hypothetical protein; hypothetical protein 4592581 10215252 Rahaq_4206 Rahnella sp. Y9602 hypothetical protein YP_004214921.1 4591889 D 741091 CDS YP_004214922.1 322834895 10215253 4592587..4592772 1 NC_015061.1 KEGG: kpu:KP1_2686 hypothetical protein; hypothetical protein 4592772 10215253 Rahaq_4207 Rahnella sp. Y9602 hypothetical protein YP_004214922.1 4592587 D 741091 CDS YP_004214923.1 322834896 10215254 4592808..4593287 1 NC_015061.1 KEGG: kva:Kvar_2562 type VI secretion system effector, Hcp1 family; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; type VI secretion system effector 4593287 10215254 Rahaq_4208 Rahnella sp. Y9602 type VI secretion system effector YP_004214923.1 4592808 D 741091 CDS YP_004214924.1 322834897 10215255 4593562..4594914 1 NC_015061.1 KEGG: ebi:EbC_02250 MFS family, sn-glycerol-3-phosphate transport protein; TIGRFAM: glycerol-3-phosphate transporter; phosphoglycerate transporter; PFAM: major facilitator superfamily MFS_1; glycerol-3-phosphate transporter 4594914 10215255 Rahaq_4209 Rahnella sp. Y9602 glycerol-3-phosphate transporter YP_004214924.1 4593562 D 741091 CDS YP_004214925.1 322834898 10215256 complement(4594964..4596040) 1 NC_015061.1 KEGG: ypz:YPZ3_2128 mannitol transport ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter 4596040 10215256 Rahaq_4210 Rahnella sp. Y9602 ABC transporter YP_004214925.1 4594964 R 741091 CDS YP_004214926.1 322834899 10215257 complement(4596073..4597437) 1 NC_015061.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: ent:Ent638_2662 phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II 4597437 10215257 Rahaq_4211 Rahnella sp. Y9602 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II YP_004214926.1 4596073 R 741091 CDS YP_004214927.1 322834900 10215258 complement(4597492..4598526) 1 NC_015061.1 KEGG: ypb:YPTS_2613 LacI family transcription regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator 4598526 10215258 Rahaq_4212 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004214927.1 4597492 R 741091 CDS YP_004214928.1 322834901 10215259 4598794..4600056 1 NC_015061.1 PFAM: extracellular solute-binding protein family 1; KEGG: ypb:YPTS_2612 extracellular solute-binding protein; extracellular solute-binding protein 4600056 10215259 Rahaq_4213 Rahnella sp. Y9602 extracellular solute-binding protein YP_004214928.1 4598794 D 741091 CDS YP_004214929.1 322834902 10215260 4600060..4600929 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypy:YPK_1635 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4600929 10215260 Rahaq_4214 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004214929.1 4600060 D 741091 CDS YP_004214930.1 322834903 10215261 4600926..4601807 1 NC_015061.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypb:YPTS_2610 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4601807 10215261 Rahaq_4215 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004214930.1 4600926 D 741091 CDS YP_004214931.1 322834904 10215262 4601817..4603370 1 NC_015061.1 KEGG: gym:GYMC10_0576 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; alpha amylase 4603370 10215262 Rahaq_4216 Rahnella sp. Y9602 alpha amylase YP_004214931.1 4601817 D 741091 CDS YP_004214932.1 322834905 10215263 4603351..4604418 1 NC_015061.1 PFAM: glycosidase related protein; KEGG: ypb:YPTS_2609 glycosidase PH1107-related; glycosidase-like protein 4604418 10215263 Rahaq_4217 Rahnella sp. Y9602 glycosidase-like protein YP_004214932.1 4603351 D 741091 CDS YP_004214933.1 322834906 10215264 4604415..4605329 1 NC_015061.1 PFAM: protein of unknown function DUF1861; KEGG: pjd:Pjdr2_5413 protein of unknown function DUF1861; hypothetical protein 4605329 10215264 Rahaq_4218 Rahnella sp. Y9602 hypothetical protein YP_004214933.1 4604415 D 741091 CDS YP_004214934.1 322834907 10215265 4605506..4607179 1 NC_015061.1 PFAM: Polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: enc:ECL_04452 TPS family two-partner secretion family member CdiB; Polypeptide-transport-associated domain protein ShlB-type 4607179 10215265 Rahaq_4219 Rahnella sp. Y9602 Polypeptide-transport-associated domain protein ShlB-type YP_004214934.1 4605506 D 741091 CDS YP_004214935.1 322834908 10215266 4607192..4615768 1 NC_015061.1 KEGG: kpe:KPK_4110 filamentous haemagglutinin family protein; TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein; protein of unknown function DUF638 hemagglutinin/hemolysin; filamentous hemagglutinin family outer membrane protein 4615768 10215266 Rahaq_4220 Rahnella sp. Y9602 filamentous hemagglutinin family outer membrane protein YP_004214935.1 4607192 D 741091 CDS YP_004214936.1 322834909 10215267 4615768..4616028 1 NC_015061.1 KEGG: epy:EpC_29120 hypothetical protein; hypothetical protein 4616028 10215267 Rahaq_4221 Rahnella sp. Y9602 hypothetical protein YP_004214936.1 4615768 D 741091 CDS YP_004214937.1 322834910 10215268 4616025..4616873 1 NC_015061.1 PFAM: protein of unknown function DUF638 hemagglutinin/hemolysin; KEGG: eic:NT01EI_3309 hypothetical protein; hypothetical protein 4616873 10215268 Rahaq_4222 Rahnella sp. Y9602 hypothetical protein YP_004214937.1 4616025 D 741091 CDS YP_004214938.1 322834911 10215269 4616870..4617103 1 NC_015061.1 KEGG: hya:HY04AAS1_0382 integral membrane sensor signal transduction histidine kinase; hypothetical protein 4617103 10215269 Rahaq_4223 Rahnella sp. Y9602 hypothetical protein YP_004214938.1 4616870 D 741091 CDS YP_004214939.1 322834912 10215270 complement(4617148..4617387) 1 NC_015061.1 PFAM: Domain of unknown function DUF1813 HSP20-like; KEGG: plu:plu3591 hypothetical protein; hypothetical protein 4617387 10215270 Rahaq_4224 Rahnella sp. Y9602 hypothetical protein YP_004214939.1 4617148 R 741091 CDS YP_004214940.1 322834913 10215271 complement(4617467..4617754) 1 NC_015061.1 KEGG: eca:ECA3417 phage regulatory protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 4617754 10215271 Rahaq_4225 Rahnella sp. Y9602 helix-turn-helix domain-containing protein YP_004214940.1 4617467 R 741091 CDS YP_004214941.1 322834914 10215273 4619592..4619852 1 NC_015061.1 KEGG: epy:EpC_29120 hypothetical protein; hypothetical protein 4619852 10215273 Rahaq_4227 Rahnella sp. Y9602 hypothetical protein YP_004214941.1 4619592 D 741091 CDS YP_004214942.1 322834915 10215275 complement(4620175..4620984) 1 NC_015061.1 KEGG: spe:Spro_0197 sugar phosphatase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase 4620984 10215275 Rahaq_4229 Rahnella sp. Y9602 cof family hydrolase YP_004214942.1 4620175 R 741091 CDS YP_004214943.1 322834916 10215276 complement(4621033..4622025) 1 NC_015061.1 KEGG: spe:Spro_0196 lysophospholipase L2; PFAM: alpha/beta hydrolase fold; lysophospholipase 4622025 10215276 Rahaq_4230 Rahnella sp. Y9602 lysophospholipase YP_004214943.1 4621033 R 741091 CDS YP_004214944.1 322834917 10215277 4622148..4622768 1 NC_015061.1 KEGG: pwa:Pecwa_4152 homoserine/homoserine lactone efflux protein; TIGRFAM: homoserine/threonine efflux pump; PFAM: lysine exporter protein (LYSE/YGGA); homoserine/threonine efflux pump 4622768 10215277 Rahaq_4231 Rahnella sp. Y9602 homoserine/threonine efflux pump YP_004214944.1 4622148 D 741091 CDS YP_004214945.1 322834918 10215278 complement(4622833..4623450) 1 NC_015061.1 KEGG: yen:YE0205 threonine efflux system; TIGRFAM: homoserine/threonine efflux pump; PFAM: lysine exporter protein (LYSE/YGGA); homoserine/threonine efflux pump 4623450 10215278 Rahaq_4232 Rahnella sp. Y9602 homoserine/threonine efflux pump YP_004214945.1 4622833 R 741091 CDS YP_004214946.1 322834919 10215279 complement(4623488..4625320) 1 NC_015061.1 TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: RQC domain; DEAD/DEAH box helicase domain protein; helicase domain protein; HRDC domain protein; KEGG: yen:YE0204 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase ; helicase domain protein; HRDC domain protein; ATP-dependent DNA helicase RecQ 4625320 10215279 Rahaq_4233 Rahnella sp. Y9602 ATP-dependent DNA helicase RecQ YP_004214946.1 4623488 R 741091 CDS YP_004214947.1 322834920 10215280 complement(4625449..4626327) 1 NC_015061.1 KEGG: spe:Spro_0192 phospholipase A; PFAM: phospholipase A1; Phospholipase A(1) 4626327 10215280 Rahaq_4234 Rahnella sp. Y9602 Phospholipase A(1) YP_004214947.1 4625449 R 741091 CDS YP_004214948.1 322834921 10215281 complement(4626406..4626549) 1 NC_015061.1 hypothetical protein 4626549 10215281 Rahaq_4235 Rahnella sp. Y9602 hypothetical protein YP_004214948.1 4626406 R 741091 CDS YP_004214949.1 322834922 10215282 4626582..4627064 1 NC_015061.1 PFAM: thioesterase superfamily protein; KEGG: spe:Spro_0191 hypothetical protein; thioesterase superfamily protein 4627064 10215282 Rahaq_4236 Rahnella sp. Y9602 thioesterase superfamily protein YP_004214949.1 4626582 D 741091 CDS YP_004214950.1 322834923 10215283 4627113..4628027 1 NC_015061.1 KEGG: esa:ESA_03741 hypothetical protein; TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; RarD protein, DMT superfamily transporter 4628027 10215283 Rahaq_4237 Rahnella sp. Y9602 RarD protein, DMT superfamily transporter YP_004214950.1 4627113 D 741091 CDS YP_004214951.1 322834924 10215284 complement(4627992..4629059) 1 NC_015061.1 KEGG: spe:Spro_0189 ammonia monooxygenase; TIGRFAM: membrane protein AbrB duplication; PFAM: ammonia monooxygenase; AbrB family transcriptional regulator 4629059 10215284 Rahaq_4238 Rahnella sp. Y9602 AbrB family transcriptional regulator YP_004214951.1 4627992 R 741091 CDS YP_004214952.1 322834925 10215285 complement(4629066..4630016) 1 NC_015061.1 KEGG: spe:Spro_0188 magnesium/nickel/cobalt transporter CorA; TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; magnesium and cobalt transport protein CorA 4630016 10215285 Rahaq_4239 Rahnella sp. Y9602 magnesium and cobalt transport protein CorA YP_004214952.1 4629066 R 741091 CDS YP_004214953.1 322834926 10215286 4630436..4630912 1 NC_015061.1 KEGG: ddc:Dd586_1324 hypothetical protein; hypothetical protein 4630912 10215286 Rahaq_4240 Rahnella sp. Y9602 hypothetical protein YP_004214953.1 4630436 D 741091 CDS YP_004214954.1 322834927 10215287 complement(4631055..4633217) 1 NC_015061.1 KEGG: spe:Spro_0186 DNA-dependent helicase II; TIGRFAM: DNA helicase II; PFAM: UvrD/REP helicase; DNA helicase II 4633217 10215287 Rahaq_4241 Rahnella sp. Y9602 DNA helicase II YP_004214954.1 4631055 R 741091 CDS YP_004214955.1 322834928 10215288 complement(4633314..4634030) 1 NC_015061.1 KEGG: dda:Dd703_0235 HAD-superfamily hydrolase, subfamily IA, variant 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 4634030 10215288 Rahaq_4242 Rahnella sp. Y9602 HAD-superfamily hydrolase YP_004214955.1 4633314 R 741091 CDS YP_004214956.1 322834929 10215289 complement(4634030..4634941) 1 NC_015061.1 KEGG: yen:YE0194 site-specific tyrosine recombinase XerC; TIGRFAM: tyrosine recombinase XerC; PFAM: integrase family protein; integrase domain protein SAM domain protein; tyrosine recombinase XerC 4634941 10215289 Rahaq_4243 Rahnella sp. Y9602 tyrosine recombinase XerC YP_004214956.1 4634030 R 741091 CDS YP_004214957.1 322834930 10215290 complement(4634938..4635642) 1 NC_015061.1 PFAM: protein of unknown function DUF484; KEGG: ypb:YPTS_0204 hypothetical protein; hypothetical protein 4635642 10215290 Rahaq_4244 Rahnella sp. Y9602 hypothetical protein YP_004214957.1 4634938 R 741091 CDS YP_004214958.1 322834931 10215291 complement(4635639..4636463) 1 NC_015061.1 KEGG: spe:Spro_0182 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase; diaminopimelate epimerase 4636463 10215291 Rahaq_4245 Rahnella sp. Y9602 diaminopimelate epimerase YP_004214958.1 4635639 R 741091 CDS YP_004214959.1 322834932 10215292 complement(4636560..4636763) 1 NC_015061.1 manually curated; KEGG: yen:YE0191 lipoprotein; lipoprotein 4636763 10215292 Rahaq_4246 Rahnella sp. Y9602 lipoprotein YP_004214959.1 4636560 R 741091 CDS YP_004214960.1 322834933 10215293 complement(4636922..4639480) 1 NC_015061.1 KEGG: spe:Spro_0179 adenylate cyclase; PFAM: adenylate cyclase class-I; adenylate cyclase 4639480 10215293 Rahaq_4247 Rahnella sp. Y9602 adenylate cyclase YP_004214960.1 4636922 R 741091 CDS YP_004214961.1 322834934 10215294 4639808..4640749 1 NC_015061.1 KEGG: spe:Spro_0178 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; porphobilinogen deaminase 4640749 10215294 Rahaq_4248 Rahnella sp. Y9602 porphobilinogen deaminase YP_004214961.1 4639808 D 741091 CDS YP_004214962.1 322834935 10215295 4640746..4641495 1 NC_015061.1 PFAM: Uroporphyrinogen III synthase HEM4; KEGG: spe:Spro_0177 uroporphyrinogen-III synthase; uroporphyrinogen III synthase HEM4 4641495 10215295 Rahaq_4249 Rahnella sp. Y9602 uroporphyrinogen III synthase HEM4 YP_004214962.1 4640746 D 741091 CDS YP_004214963.1 322834936 10215296 4641509..4642660 1 NC_015061.1 KEGG: yen:YE0185 uroporphyrinogen III C-methyltransferase; PFAM: protein of unknown function DUF513 hemX; uroporphyrinogen-III C-methyltransferase 4642660 10215296 Rahaq_4250 Rahnella sp. Y9602 uroporphyrinogen-III C-methyltransferase YP_004214963.1 4641509 D 741091 CDS YP_004214964.1 322834937 10215297 4642664..4643860 1 NC_015061.1 KEGG: spe:Spro_0175 protoheme IX biogenesis protein; TIGRFAM: HemY protein; PFAM: HemY domain protein; HemY protein 4643860 10215297 Rahaq_4251 Rahnella sp. Y9602 HemY protein YP_004214964.1 4642664 D 741091 CDS YP_004214965.1 322834938 10215302 complement(4645063..4646457) 1 NC_015061.1 PFAM: amino acid permease-associated region; KEGG: ypb:YPTS_0192 transport protein YifK; amino acid permease 4646457 10215302 Rahaq_4252 Rahnella sp. Y9602 amino acid permease YP_004214965.1 4645063 R 741091 CDS YP_004214966.1 322834939 10215303 complement(4646699..4647439) 1 NC_015061.1 TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; KEGG: plu:plu4651 UDP-N-acetyl-D-mannosaminuronic acid transferase; PFAM: glycosyl transferase WecB/TagA/CpsF; WecB/TagA/CpsF family glycosyl transferase 4647439 10215303 Rahaq_4253 Rahnella sp. Y9602 WecB/TagA/CpsF family glycosyl transferase YP_004214966.1 4646699 R 741091 CDS YP_004214967.1 322834940 10215304 complement(4647423..4648802) 1 NC_015061.1 PFAM: WzyE family protein; KEGG: spe:Spro_0171 common antigen polymerase; WzyE family protein 4648802 10215304 Rahaq_4254 Rahnella sp. Y9602 WzyE family protein YP_004214967.1 4647423 R 741091 CDS YP_004214968.1 322834941 10215305 complement(4648799..4649881) 1 NC_015061.1 PFAM: 4-alpha-L-fucosyltransferase; KEGG: spe:Spro_0170 4-alpha-L-fucosyltransferase; 4-alpha-L-fucosyltransferase 4649881 10215305 Rahaq_4255 Rahnella sp. Y9602 4-alpha-L-fucosyltransferase YP_004214968.1 4648799 R 741091 CDS YP_004214969.1 322834942 10215306 complement(4649878..4651128) 1 NC_015061.1 PFAM: polysaccharide biosynthesis protein; KEGG: spe:Spro_0169 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 4651128 10215306 Rahaq_4256 Rahnella sp. Y9602 polysaccharide biosynthesis protein YP_004214969.1 4649878 R 741091 CDS YP_004214970.1 322834943 10215307 complement(4651130..4652260) 1 NC_015061.1 KEGG: spe:Spro_0168 TDP-4-oxo-6-deoxy-D-glucose transaminase; TIGRFAM: TDP-4-keto-6-deoxy-D-glucose transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; TDP-4-keto-6-deoxy-D-glucose transaminase 4652260 10215307 Rahaq_4257 Rahnella sp. Y9602 TDP-4-keto-6-deoxy-D-glucose transaminase YP_004214970.1 4651130 R 741091 CDS YP_004214971.1 322834944 10215308 complement(4652265..4652999) 1 NC_015061.1 KEGG: xne:XNC1_0390 acyl-CoA N-acyltransferase, lipopolysaccharide biosynthesis protein; TIGRFAM: TDP-D-fucosamine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; TDP-D-fucosamine acetyltransferase 4652999 10215308 Rahaq_4258 Rahnella sp. Y9602 TDP-D-fucosamine acetyltransferase YP_004214971.1 4652265 R 741091 CDS YP_004214972.1 322834945 10215309 complement(4652966..4654228) 1 NC_015061.1 KEGG: spe:Spro_0164 UDP-N-acetyl-D-mannosamine dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 4654228 10215309 Rahaq_4259 Rahnella sp. Y9602 nucleotide sugar dehydrogenase YP_004214972.1 4652966 R 741091 CDS YP_004214973.1 322834946 10215310 complement(4654225..4655355) 1 NC_015061.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; manually curated; KEGG: spe:Spro_0163 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 4655355 10215310 Rahaq_4260 Rahnella sp. Y9602 UDP-N-acetylglucosamine 2-epimerase YP_004214973.1 4654225 R 741091 CDS YP_004214974.1 322834947 10215311 complement(4655352..4656404) 1 NC_015061.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: spe:Spro_0162 lipopolysaccharide biosynthesis protein WzzE; lipopolysaccharide biosynthesis protein 4656404 10215311 Rahaq_4261 Rahnella sp. Y9602 lipopolysaccharide biosynthesis protein YP_004214974.1 4655352 R 741091 CDS YP_004214975.1 322834948 10215312 complement(4656449..4657519) 1 NC_015061.1 KEGG: ypb:YPTS_0180 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; PFAM: Glycosyl transferase, family 4, conserved region; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 4657519 10215312 Rahaq_4262 Rahnella sp. Y9602 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase YP_004214975.1 4656449 R 741091 CDS YP_004214976.1 322834949 10215313 complement(4657822..4659081) 1 NC_015061.1 TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; Rho termination factor RNA-binding; Rho termination factor domain protein; KEGG: ebi:EbC_01950 transcription termination factor Rho; SMART: Cold shock protein; AAA ATPase; transcription termination factor Rho 4659081 10215313 Rahaq_4263 Rahnella sp. Y9602 transcription termination factor Rho YP_004214976.1 4657822 R 741091 CDS YP_004214977.1 322834950 10215314 complement(4659497..4659823) 1 NC_015061.1 KEGG: ent:Ent638_4004 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein; thioredoxin 4659823 10215314 Rahaq_4264 Rahnella sp. Y9602 thioredoxin YP_004214977.1 4659497 R 741091 CDS YP_004214978.1 322834951 10215315 4659941..4661233 1 NC_015061.1 KEGG: ypb:YPTS_0177 ATP-dependent RNA helicase RhlB; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase 4661233 10215315 Rahaq_4265 Rahnella sp. Y9602 DEAD/DEAH box helicase YP_004214978.1 4659941 D 741091 CDS YP_004214979.1 322834952 10215316 4661240..4662730 1 NC_015061.1 KEGG: spe:Spro_0157 guanosine pentaphosphate phosphohydrolase; PFAM: Ppx/GppA phosphatase; Ppx/GppA phosphatase 4662730 10215316 Rahaq_4266 Rahnella sp. Y9602 Ppx/GppA phosphatase YP_004214979.1 4661240 D 741091 CDS YP_004214980.1 322834953 10215317 complement(4662808..4664832) 1 NC_015061.1 KEGG: spe:Spro_0156 ATP-dependent DNA helicase Rep; TIGRFAM: ATP-dependent DNA helicase Rep; PFAM: UvrD/REP helicase; ATP-dependent DNA helicase Rep 4664832 10215317 Rahaq_4267 Rahnella sp. Y9602 ATP-dependent DNA helicase Rep YP_004214980.1 4662808 R 741091 CDS YP_004214981.1 322834954 10215318 4664921..4665289 1 NC_015061.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: ctu:Ctu_02140 peptidyl-prolyl cis-trans isomerase C; PpiC-type peptidyl-prolyl cis-trans isomerase 4665289 10215318 Rahaq_4268 Rahnella sp. Y9602 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004214981.1 4664921 D 741091 CDS YP_004214982.1 322834955 10215319 complement(4665379..4666854) 1 NC_015061.1 TIGRFAM: ketol-acid reductoisomerase; KEGG: yen:YE0155 ketol-acid reductoisomerase; PFAM: acetohydroxy acid isomeroreductase; Acetohydroxy acid isomeroreductase catalytic domain-containing protein; ketol-acid reductoisomerase 4666854 10215319 Rahaq_4269 Rahnella sp. Y9602 ketol-acid reductoisomerase YP_004214982.1 4665379 R 741091 CDS YP_004214983.1 322834956 10215320 4667041..4667922 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: yen:YE0154 DNA-binding transcriptional regulator IlvY; LysR family transcriptional regulator 4667922 10215320 Rahaq_4270 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004214983.1 4667041 D 741091 CDS YP_004214984.1 322834957 10215321 complement(4667971..4669515) 1 NC_015061.1 KEGG: spe:Spro_4756 threonine dehydratase; TIGRFAM: threonine dehydratase, biosynthetic; PFAM: Pyridoxal-5'-phosphate-dependent protein subunit beta; Threonine dehydratase domain-containing protein; threonine dehydratase, biosynthetic 4669515 10215321 Rahaq_4271 Rahnella sp. Y9602 threonine dehydratase, biosynthetic YP_004214984.1 4667971 R 741091 CDS YP_004214985.1 322834958 10215322 complement(4669521..4671371) 1 NC_015061.1 TIGRFAM: dihydroxy-acid dehydratase; KEGG: spe:Spro_4757 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase 4671371 10215322 Rahaq_4272 Rahnella sp. Y9602 dihydroxy-acid dehydratase YP_004214985.1 4669521 R 741091 CDS YP_004214986.1 322834959 10215323 complement(4671506..4672435) 1 NC_015061.1 KEGG: pct:PC1_4030 branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; branched-chain amino acid aminotransferase 4672435 10215323 Rahaq_4273 Rahnella sp. Y9602 branched-chain amino acid aminotransferase YP_004214986.1 4671506 R 741091 CDS YP_004214987.1 322834960 10215324 complement(4672452..4672715) 1 NC_015061.1 KEGG: yen:YE0149 acetolactate synthase 2 regulatory subunit; acetolactate synthase 2 regulatory subunit 4672715 10215324 Rahaq_4274 Rahnella sp. Y9602 acetolactate synthase 2 regulatory subunit YP_004214987.1 4672452 R 741091 CDS YP_004214988.1 322834961 10215325 complement(4672712..4674358) 1 NC_015061.1 KEGG: yen:YE0148 acetolactate synthase 2 catalytic subunit; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; acetolactate synthase large subunit 4674358 10215325 Rahaq_4275 Rahnella sp. Y9602 acetolactate synthase large subunit YP_004214988.1 4672712 R 741091 CDS YP_004214989.1 322834962 10215326 complement(4674740..4675978) 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_4761 major facilitator transporter; major facilitator superfamily protein 4675978 10215326 Rahaq_4276 Rahnella sp. Y9602 major facilitator superfamily protein YP_004214989.1 4674740 R 741091 CDS YP_004214990.1 322834963 10215327 4676345..4677880 1 NC_015061.1 TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: pct:PC1_4033 Mg chelatase, subunit ChlI; SMART: AAA ATPase; Mg chelatase subunit ChlI 4677880 10215327 Rahaq_4277 Rahnella sp. Y9602 Mg chelatase subunit ChlI YP_004214990.1 4676345 D 741091 CDS YP_004214991.1 322834964 10215328 complement(4677906..4678244) 1 NC_015061.1 PFAM: protein of unknown function DUF413; KEGG: spe:Spro_4763 hypothetical protein; hypothetical protein 4678244 10215328 Rahaq_4278 Rahnella sp. Y9602 hypothetical protein YP_004214991.1 4677906 R 741091 CDS YP_004214992.1 322834965 10215329 4678363..4679187 1 NC_015061.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: spe:Spro_4764 transcriptional regulator HdfR; LysR family transcriptional regulator 4679187 10215329 Rahaq_4279 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004214992.1 4678363 D 741091 CDS YP_004214993.1 322834966 10215330 complement(4679200..4680186) 1 NC_015061.1 PFAM: inner-membrane translocator; KEGG: spe:Spro_4765 inner membrane ABC transporter permease YjfF; inner-membrane translocator 4680186 10215330 Rahaq_4280 Rahnella sp. Y9602 inner-membrane translocator YP_004214993.1 4679200 R 741091 CDS YP_004214994.1 322834967 10215331 complement(4680186..4681184) 1 NC_015061.1 PFAM: inner-membrane translocator; KEGG: ypb:YPTS_0138 inner-membrane translocator; inner-membrane translocator 4681184 10215331 Rahaq_4281 Rahnella sp. Y9602 inner-membrane translocator YP_004214994.1 4680186 R 741091 CDS YP_004214995.1 322834968 10215332 complement(4681218..4682726) 1 NC_015061.1 KEGG: ypy:YPK_4067 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 4682726 10215332 Rahaq_4282 Rahnella sp. Y9602 ABC transporter YP_004214995.1 4681218 R 741091 CDS YP_004214996.1 322834969 10215333 complement(4682810..4683766) 1 NC_015061.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: pwa:Pecwa_4229 periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator 4683766 10215333 Rahaq_4283 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004214996.1 4682810 R 741091 CDS YP_004214997.1 322834970 10215334 4684140..4684403 1 NC_015061.1 PFAM: transposase IS3/IS911 family protein; KEGG: spe:Spro_0375 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 4684403 10215334 Rahaq_4284 Rahnella sp. Y9602 transposase IS3/IS911 family protein YP_004214997.1 4684140 D 741091 CDS YP_004214998.1 322834971 10215335 4684430..4685260 1 NC_015061.1 PFAM: Integrase catalytic region; KEGG: enc:ECL_A124 IS3 family transposase orfB; integrase catalytic subunit 4685260 10215335 Rahaq_4285 Rahnella sp. Y9602 integrase catalytic subunit YP_004214998.1 4684430 D 741091 CDS YP_004214999.1 322834972 10215343 complement(4691360..4692241) 1 NC_015061.1 TIGRFAM: glutamate racemase; KEGG: spe:Spro_4769 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; glutamate racemase 4692241 10215343 Rahaq_4286 Rahnella sp. Y9602 glutamate racemase YP_004214999.1 4691360 R 741091 CDS YP_004215000.1 322834973 10215344 complement(4692186..4694063) 1 NC_015061.1 KEGG: ypz:YPZ3_3451 vitamin B12 receptor protein; TIGRFAM: TonB-dependent vitamin B12 receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; TonB-dependent vitamin B12 receptor 4694063 10215344 Rahaq_4287 Rahnella sp. Y9602 TonB-dependent vitamin B12 receptor YP_004215000.1 4692186 R 741091 CDS YP_004215001.1 322834974 10215345 4694550..4695650 1 NC_015061.1 KEGG: spe:Spro_4771 tRNA (uracil-5-)-methyltransferase; TIGRFAM: tRNA (uracil-5-)-methyltransferase; PFAM: (Uracil-5)-methyltransferase; tRNA (uracil-5-)-methyltransferase 4695650 10215345 Rahaq_4288 Rahnella sp. Y9602 tRNA (uracil-5-)-methyltransferase YP_004215001.1 4694550 D 741091 CDS YP_004215002.1 322834975 10215346 complement(4695721..4696860) 1 NC_015061.1 PFAM: glycosyl hydrolase family 88; KEGG: pct:PC1_3379 glycosyl hydrolase family 88; glycosyl hydrolase family protein 4696860 10215346 Rahaq_4289 Rahnella sp. Y9602 glycosyl hydrolase family protein YP_004215002.1 4695721 R 741091 CDS YP_004215003.1 322834976 10215347 complement(4696885..4698471) 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_3380 oligogalacturonide transporter; major facilitator superfamily protein 4698471 10215347 Rahaq_4290 Rahnella sp. Y9602 major facilitator superfamily protein YP_004215003.1 4696885 R 741091 CDS YP_004215004.1 322834977 10215348 4698567..4698686 1 NC_015061.1 hypothetical protein 4698686 10215348 Rahaq_4291 Rahnella sp. Y9602 hypothetical protein YP_004215004.1 4698567 D 741091 CDS YP_004215005.1 322834978 10215349 complement(4698745..4699104) 1 NC_015061.1 PFAM: protein of unknown function DUF1422; KEGG: pct:PC1_0190 hypothetical protein; hypothetical protein 4699104 10215349 Rahaq_4292 Rahnella sp. Y9602 hypothetical protein YP_004215005.1 4698745 R 741091 CDS YP_004215006.1 322834979 10215350 complement(4699079..4699759) 1 NC_015061.1 PFAM: regulatory protein TetR; KEGG: ebi:EbC_01760 fatty acid biosynthesis regulator; TetR family transcriptional regulator 4699759 10215350 Rahaq_4293 Rahnella sp. Y9602 TetR family transcriptional regulator YP_004215006.1 4699079 R 741091 CDS YP_004215007.1 322834980 10215351 4699972..4701372 1 NC_015061.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: yen:YE0134 soluble pyridine nucleotide transhydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4701372 10215351 Rahaq_4294 Rahnella sp. Y9602 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004215007.1 4699972 D 741091 CDS YP_004215008.1 322834981 10215352 complement(4701355..4702278) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_4775 DNA-binding transcriptional regulator OxyR; LysR family transcriptional regulator 4702278 10215352 Rahaq_4295 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004215008.1 4701355 R 741091 CDS YP_004215009.1 322834982 10215353 4702439..4703200 1 NC_015061.1 KEGG: yen:YE0132 peroxiredoxin/glutaredoxin family protein; TIGRFAM: glutaredoxin-family domain protein; PFAM: Redoxin domain protein; glutaredoxin; glutaredoxin-family domain-containing protein 4703200 10215353 Rahaq_4296 Rahnella sp. Y9602 glutaredoxin-family domain-containing protein YP_004215009.1 4702439 D 741091 CDS YP_004215010.1 322834983 10215354 complement(4703255..4704628) 1 NC_015061.1 KEGG: seh:SeHA_C4451 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; argininosuccinate lyase 4704628 10215354 Rahaq_4297 Rahnella sp. Y9602 argininosuccinate lyase YP_004215010.1 4703255 R 741091 CDS YP_004215011.1 322834984 10215355 complement(4704712..4705485) 1 NC_015061.1 KEGG: pwa:Pecwa_4250 acetylglutamate kinase; TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; acetylglutamate kinase 4705485 10215355 Rahaq_4298 Rahnella sp. Y9602 acetylglutamate kinase YP_004215011.1 4704712 R 741091 CDS YP_004215012.1 322834985 10215356 complement(4705617..4706621) 1 NC_015061.1 TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: ddd:Dda3937_02059 N-acetyl-gamma-glutamylphosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; N-acetyl-gamma-glutamyl-phosphate reductase 4706621 10215356 Rahaq_4299 Rahnella sp. Y9602 N-acetyl-gamma-glutamyl-phosphate reductase YP_004215012.1 4705617 R 741091 CDS YP_004215013.1 322834986 10215357 4706766..4707911 1 NC_015061.1 KEGG: ebi:EbC_01680 acetylornithine deacetylase; TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein; acetylornithine deacetylase 4707911 10215357 Rahaq_4300 Rahnella sp. Y9602 acetylornithine deacetylase YP_004215013.1 4706766 D 741091 CDS YP_004215014.1 322834987 10215358 4708202..4710847 1 NC_015061.1 KEGG: ypb:YPTS_0113 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase, C-terminal region; phosphoenolpyruvate carboxylase 4710847 10215358 Rahaq_4301 Rahnella sp. Y9602 phosphoenolpyruvate carboxylase YP_004215014.1 4708202 D 741091 CDS YP_004215015.1 322834988 10215359 complement(4710920..4711828) 1 NC_015061.1 TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: spe:Spro_4784 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 4711828 10215359 Rahaq_4302 Rahnella sp. Y9602 5,10-methylenetetrahydrofolate reductase YP_004215015.1 4710920 R 741091 CDS YP_004215016.1 322834989 10215360 complement(4712076..4714511) 1 NC_015061.1 KEGG: spe:Spro_4785 bifunctional aspartate kinase II/homoserine dehydrogenase II; TIGRFAM: aspartate kinase; PFAM: homoserine dehydrogenase; aspartate/glutamate/uridylate kinase; homoserine dehydrogenase NAD-binding; aspartate kinase 4714511 10215360 Rahaq_4303 Rahnella sp. Y9602 aspartate kinase YP_004215016.1 4712076 R 741091 CDS YP_004215017.1 322834990 10215361 complement(4714514..4715674) 1 NC_015061.1 KEGG: eta:ETA_01270 cystathionine gamma-synthase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; O-succinylhomoserine (thiol)-lyase 4715674 10215361 Rahaq_4304 Rahnella sp. Y9602 O-succinylhomoserine (thiol)-lyase YP_004215017.1 4714514 R 741091 CDS YP_004215018.1 322834991 10215362 4716005..4716322 1 NC_015061.1 PFAM: methionine repressor MetJ; KEGG: yen:YE0110 transcriptional repressor protein MetJ; methionine repressor MetJ 4716322 10215362 Rahaq_4305 Rahnella sp. Y9602 methionine repressor MetJ YP_004215018.1 4716005 D 741091 CDS YP_004215019.1 322834992 10215363 complement(4716493..4716705) 1 NC_015061.1 KEGG: spe:Spro_4788 50S ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; 50S ribosomal protein L31 4716705 10215363 Rahaq_4306 Rahnella sp. Y9602 50S ribosomal protein L31 YP_004215019.1 4716493 R 741091 CDS YP_004215020.1 322834993 10215364 4716907..4719102 1 NC_015061.1 TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: spe:Spro_4789 primosome assembly protein PriA; SMART: DEAD-like helicase ; helicase domain protein; primosomal protein N' 4719102 10215364 Rahaq_4307 Rahnella sp. Y9602 primosomal protein N' YP_004215020.1 4716907 D 741091 CDS YP_004215021.1 322834994 10215365 4719264..4720334 1 NC_015061.1 KEGG: yen:YE0107 DNA-binding transcriptional regulator CytR; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator 4720334 10215365 Rahaq_4308 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004215021.1 4719264 D 741091 CDS YP_004215022.1 322834995 10215366 4720533..4721375 1 NC_015061.1 KEGG: spe:Spro_4791 cell division protein FtsN; TIGRFAM: cell division protein FtsN; PFAM: Sporulation domain-containing protein; cell division protein FtsN 4721375 10215366 Rahaq_4309 Rahnella sp. Y9602 cell division protein FtsN YP_004215022.1 4720533 D 741091 CDS YP_004215023.1 322834996 10215367 4721440..4722021 1 NC_015061.1 PFAM: 20S proteasome A and B subunits; KEGG: dze:Dd1591_0114 ATP-dependent protease peptidase subunit; 20S proteasome subunits A/B 4722021 10215367 Rahaq_4310 Rahnella sp. Y9602 20S proteasome subunits A/B YP_004215023.1 4721440 D 741091 CDS YP_004215024.1 322834997 10215368 4722033..4723367 1 NC_015061.1 TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; KEGG: spe:Spro_4793 ATP-dependent protease ATP-binding subunit HslU; SMART: AAA ATPase; heat shock protein HslVU, ATPase subunit HslU 4723367 10215368 Rahaq_4311 Rahnella sp. Y9602 heat shock protein HslVU, ATPase subunit HslU YP_004215024.1 4722033 D 741091 CDS YP_004215025.1 322834998 10215369 4723462..4724388 1 NC_015061.1 KEGG: ypb:YPTS_0098 1,4-dihydroxy-2-naphthoate octaprenyltransferase; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 4724388 10215369 Rahaq_4312 Rahnella sp. Y9602 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_004215025.1 4723462 D 741091 CDS YP_004215026.1 322834999 10215370 4724509..4724994 1 NC_015061.1 KEGG: ebi:EbC_01530 regulator of ribonuclease activity A; TIGRFAM: regulator of ribonuclease activity A; PFAM: Dimethylmenaquinone methyltransferase; ribonuclease activity A regulator 4724994 10215370 Rahaq_4313 Rahnella sp. Y9602 ribonuclease activity A regulator YP_004215026.1 4724509 D 741091 CDS YP_004215027.1 322835000 10215371 complement(4725059..4725298) 1 NC_015061.1 PFAM: protein of unknown function DUF904; KEGG: spe:Spro_4796 hypothetical protein; hypothetical protein 4725298 10215371 Rahaq_4314 Rahnella sp. Y9602 hypothetical protein YP_004215027.1 4725059 R 741091 CDS YP_004215028.1 322835001 10215372 4725876..4726724 1 NC_015061.1 KEGG: ypb:YPTS_0091 MIP family channel protein; TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; MIP family channel protein 4726724 10215372 Rahaq_4315 Rahnella sp. Y9602 MIP family channel protein YP_004215028.1 4725876 D 741091 CDS YP_004215029.1 322835002 10215373 4726770..4728293 1 NC_015061.1 KEGG: spe:Spro_4798 glycerol kinase; TIGRFAM: glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like; glycerol kinase 4728293 10215373 Rahaq_4316 Rahnella sp. Y9602 glycerol kinase YP_004215029.1 4726770 D 741091 CDS YP_004215030.1 322835003 10215374 4728437..4729447 1 NC_015061.1 TIGRFAM: fructose-1,6-bisphosphatase, class II; KEGG: spe:Spro_4799 fructose 1,6-bisphosphatase II; PFAM: GlpX family protein; fructose-1,6-bisphosphatase 4729447 10215374 Rahaq_4317 Rahnella sp. Y9602 fructose-1,6-bisphosphatase YP_004215030.1 4728437 D 741091 CDS YP_004215031.1 322835004 10215375 complement(4729504..4730697) 1 NC_015061.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_4800 multidrug resistance protein D; major facilitator superfamily protein 4730697 10215375 Rahaq_4318 Rahnella sp. Y9602 major facilitator superfamily protein YP_004215031.1 4729504 R 741091 CDS YP_004215032.1 322835005 10215376 4731021..4731767 1 NC_015061.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: ebi:EbC_01470 ferredoxin-NADP reductase; oxidoreductase FAD/NAD(P)-binding domain-containing protein 4731767 10215376 Rahaq_4319 Rahnella sp. Y9602 oxidoreductase FAD/NAD(P)-binding domain-containing protein YP_004215032.1 4731021 D 741091 CDS YP_004215033.1 322835006 10215377 complement(4731784..4732206) 1 NC_015061.1 PFAM: protein of unknown function DUF805; KEGG: ypi:YpsIP31758_0098 hypothetical protein; hypothetical protein 4732206 10215377 Rahaq_4320 Rahnella sp. Y9602 hypothetical protein YP_004215033.1 4731784 R 741091 CDS YP_004215034.1 322835007 10215378 4732365..4732973 1 NC_015061.1 PFAM: protein of unknown function DUF1454; KEGG: spe:Spro_4804 hypothetical protein; hypothetical protein 4732973 10215378 Rahaq_4321 Rahnella sp. Y9602 hypothetical protein YP_004215034.1 4732365 D 741091 CDS YP_004215035.1 322835008 10215379 4733101..4733868 1 NC_015061.1 TIGRFAM: triosephosphate isomerase; KEGG: yen:YE0093 triosephosphate isomerase; PFAM: triosephosphate isomerase; triosephosphate isomerase 4733868 10215379 Rahaq_4322 Rahnella sp. Y9602 triosephosphate isomerase YP_004215035.1 4733101 D 741091 CDS YP_004215036.1 322835009 10215380 complement(4733936..4734925) 1 NC_015061.1 KEGG: ypb:YPTS_0078 sulfate transporter subunit; TIGRFAM: sulfate ABC transporter periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; sulfate ABC transporter substrate-binding protein 4734925 10215380 Rahaq_4323 Rahnella sp. Y9602 sulfate ABC transporter substrate-binding protein YP_004215036.1 4733936 R 741091 CDS YP_004215037.1 322835010 10215381 complement(4735110..4736096) 1 NC_015061.1 KEGG: ypi:YpsIP31758_0089 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase; 6-phosphofructokinase 4736096 10215381 Rahaq_4324 Rahnella sp. Y9602 6-phosphofructokinase YP_004215037.1 4735110 R 741091 CDS YP_004215038.1 322835011 10215382 complement(4736444..4736953) 1 NC_015061.1 KEGG: yen:YE0087 periplasmic stress adaptor protein CpxP; periplasmic stress adaptor protein CpxP 4736953 10215382 Rahaq_4325 Rahnella sp. Y9602 periplasmic stress adaptor protein CpxP YP_004215038.1 4736444 R 741091 CDS YP_004215039.1 322835012 10215383 4737106..4737807 1 NC_015061.1 KEGG: eta:ETA_00950 DNA-binding transcriptional regulator CpxR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator 4737807 10215383 Rahaq_4326 Rahnella sp. Y9602 transcriptional regulator YP_004215039.1 4737106 D 741091 CDS YP_004215040.1 322835013 10215384 4737804..4739174 1 NC_015061.1 KEGG: yen:YE0085 two-component sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase 4739174 10215384 Rahaq_4327 Rahnella sp. Y9602 integral membrane sensor signal transduction histidine kinase YP_004215040.1 4737804 D 741091 CDS YP_004215041.1 322835014 10215385 4739212..4739685 1 NC_015061.1 KEGG: ypy:YPK_4135 RNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); TrmH family RNA methyltransferase 4739685 10215385 Rahaq_4328 Rahnella sp. Y9602 TrmH family RNA methyltransferase YP_004215041.1 4739212 D 741091 CDS YP_004215042.1 322835015 10215386 complement(4739738..4740559) 1 NC_015061.1 TIGRFAM: serine O-acetyltransferase; KEGG: yen:YE0082 serine acetyltransferase; serine O-acetyltransferase 4740559 10215386 Rahaq_4329 Rahnella sp. Y9602 serine O-acetyltransferase YP_004215042.1 4739738 R 741091 CDS YP_004215043.1 322835016 10215387 complement(4740647..4741666) 1 NC_015061.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: spe:Spro_4815 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein 4741666 10215387 Rahaq_4330 Rahnella sp. Y9602 NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein YP_004215043.1 4740647 R 741091 CDS YP_004215044.1 322835017 10215388 complement(4741666..4742136) 1 NC_015061.1 KEGG: yen:YE0080 preprotein translocase subunit SecB; TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB; protein-export protein SecB 4742136 10215388 Rahaq_4331 Rahnella sp. Y9602 protein-export protein SecB YP_004215044.1 4741666 R 741091 CDS YP_004215045.1 322835018 10215389 complement(4742201..4742452) 1 NC_015061.1 KEGG: yen:YE0079 glutaredoxin 3; TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; glutaredoxin 3 4742452 10215389 Rahaq_4332 Rahnella sp. Y9602 glutaredoxin 3 YP_004215045.1 4742201 R 741091 CDS YP_004215046.1 322835019 10215390 complement(4742506..4742937) 1 NC_015061.1 KEGG: yen:YE0078 hypothetical protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; rhodanese domain-containing protein 4742937 10215390 Rahaq_4333 Rahnella sp. Y9602 rhodanese domain-containing protein YP_004215046.1 4742506 R 741091 CDS YP_004215047.1 322835020 10215391 4743242..4744786 1 NC_015061.1 TIGRFAM: phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; KEGG: yen:YE0077 phosphoglyceromutase; PFAM: BPG-independent PGAM domain protein; metalloenzyme domain protein; phosphoglycerate mutase 4744786 10215391 Rahaq_4334 Rahnella sp. Y9602 phosphoglycerate mutase YP_004215047.1 4743242 D 741091 CDS YP_004215048.1 322835021 10215392 4744896..4746224 1 NC_015061.1 PFAM: Peptidase M23; KEGG: spe:Spro_4820 hypothetical protein; peptidase M23 4746224 10215392 Rahaq_4335 Rahnella sp. Y9602 peptidase M23 YP_004215048.1 4744896 D 741091 CDS YP_004215049.1 322835022 10215393 4746227..4747156 1 NC_015061.1 KEGG: ent:Ent638_0121 protein of unknown function DUF610, YibQ; manually curated; PFAM: protein of unknown function DUF610 YibQ; hypothetical protein 4747156 10215393 Rahaq_4336 Rahnella sp. Y9602 hypothetical protein YP_004215049.1 4746227 D 741091 CDS YP_004215050.1 322835023 10215394 4747338..4748561 1 NC_015061.1 PFAM: glycosyl transferase group 1; KEGG: ebi:EbC_00820 glycosyl transferase, group 1; group 1 glycosyl transferase 4748561 10215394 Rahaq_4337 Rahnella sp. Y9602 group 1 glycosyl transferase YP_004215050.1 4747338 D 741091 CDS YP_004215051.1 322835024 10215395 4748564..4749493 1 NC_015061.1 KEGG: ebi:EbC_00810 hypothetical protein; hypothetical protein 4749493 10215395 Rahaq_4338 Rahnella sp. Y9602 hypothetical protein YP_004215051.1 4748564 D 741091 CDS YP_004215052.1 322835025 10215396 complement(4749561..4750583) 1 NC_015061.1 KEGG: ypb:YPTS_0059 L-threonine 3-dehydrogenase; TIGRFAM: L-threonine 3-dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; L-threonine 3-dehydrogenase 4750583 10215396 Rahaq_4339 Rahnella sp. Y9602 L-threonine 3-dehydrogenase YP_004215052.1 4749561 R 741091 CDS YP_004215053.1 322835026 10215397 complement(4750593..4751789) 1 NC_015061.1 TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase; KEGG: spe:Spro_4824 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: aminotransferase class I and II; 2-amino-3-ketobutyrate CoA ligase 4751789 10215397 Rahaq_4340 Rahnella sp. Y9602 2-amino-3-ketobutyrate CoA ligase YP_004215053.1 4750593 R 741091 CDS YP_004215054.1 322835027 10215398 4752032..4752964 1 NC_015061.1 KEGG: pct:PC1_4088 ADP-L-glycero-D-mannoheptose-6-epimerase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; ADP-L-glycero-D-manno-heptose-6-epimerase 4752964 10215398 Rahaq_4341 Rahnella sp. Y9602 ADP-L-glycero-D-manno-heptose-6-epimerase YP_004215054.1 4752032 D 741091 CDS YP_004215055.1 322835028 10215399 4752995..4754044 1 NC_015061.1 KEGG: ddd:Dda3937_02040 ADP-heptose:LPS heptosyltransferase II; TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; lipopolysaccharide heptosyltransferase II 4754044 10215399 Rahaq_4342 Rahnella sp. Y9602 lipopolysaccharide heptosyltransferase II YP_004215055.1 4752995 D 741091 CDS YP_004215056.1 322835029 10215400 4754044..4755033 1 NC_015061.1 KEGG: spe:Spro_4827 ADP-heptose:LPS heptosyl transferase I; TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; lipopolysaccharide heptosyltransferase I 4755033 10215400 Rahaq_4343 Rahnella sp. Y9602 lipopolysaccharide heptosyltransferase I YP_004215056.1 4754044 D 741091 CDS YP_004215057.1 322835030 10215401 4755030..4756127 1 NC_015061.1 PFAM: glycosyl transferase family 9; KEGG: ebi:EbC_00710 glycosyl transferase, family 9; glycosyl transferase family protein 4756127 10215401 Rahaq_4344 Rahnella sp. Y9602 glycosyl transferase family protein YP_004215057.1 4755030 D 741091 CDS YP_004215058.1 322835031 10215402 4756120..4757124 1 NC_015061.1 KEGG: eca:ECA0157 lipopolysaccharide 1,2-glucosyltransferase; PFAM: glycosyl transferase family 8; Lipopolysaccharide glucosyltransferase I 4757124 10215402 Rahaq_4345 Rahnella sp. Y9602 Lipopolysaccharide glucosyltransferase I YP_004215058.1 4756120 D 741091 CDS YP_004215059.1 322835032 10215403 4757121..4758407 1 NC_015061.1 PFAM: O-antigen polymerase; KEGG: ebi:EbC_pEb10200130 lipid A core, surface polymer ligase WaaL; O-antigen polymerase 4758407 10215403 Rahaq_4346 Rahnella sp. Y9602 O-antigen polymerase YP_004215059.1 4757121 D 741091 CDS YP_004215060.1 322835033 10215404 4758477..4759484 1 NC_015061.1 PFAM: glycosyl transferase family 2; KEGG: ebi:EbC_00700 glycosyl transferase family 2; family 2 glycosyl transferase 4759484 10215404 Rahaq_4347 Rahnella sp. Y9602 family 2 glycosyl transferase YP_004215060.1 4758477 D 741091 CDS YP_004215061.1 322835034 10215405 4759645..4760727 1 NC_015061.1 manually curated; TIGRFAM: lipopolysaccharide heptosyltransferase III; KEGG: pam:PANA_3896 RfaQ; PFAM: glycosyl transferase family 9; lipopolysaccharide heptosyltransferase III 4760727 10215405 Rahaq_4348 Rahnella sp. Y9602 lipopolysaccharide heptosyltransferase III YP_004215061.1 4759645 D 741091 CDS YP_004215062.1 322835035 10215406 4760720..4761865 1 NC_015061.1 PFAM: glycosyl transferase group 1; KEGG: ebi:EbC_00680 lipopolysaccharide glycosyltransferase; group 1 glycosyl transferase 4761865 10215406 Rahaq_4349 Rahnella sp. Y9602 group 1 glycosyl transferase YP_004215062.1 4760720 D 741091 CDS YP_004215063.1 322835036 10215407 4761986..4763260 1 NC_015061.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; glycosyl transferase group 1; KEGG: yen:YE0069 3-deoxy-D-manno-octulosonic-acid transferase; three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein 4763260 10215407 Rahaq_4350 Rahnella sp. Y9602 three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein YP_004215063.1 4761986 D 741091 CDS YP_004215064.1 322835037 10215408 4763260..4764027 1 NC_015061.1 PFAM: glycosyl transferase family 2; KEGG: yen:YE0068 lipopolysaccharide core biosynthesis glycosyl transferase; family 2 glycosyl transferase 4764027 10215408 Rahaq_4351 Rahnella sp. Y9602 family 2 glycosyl transferase YP_004215064.1 4763260 D 741091 CDS YP_004215065.1 322835038 10215409 4764034..4764516 1 NC_015061.1 TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: spe:Spro_4838 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase; pantetheine-phosphate adenylyltransferase 4764516 10215409 Rahaq_4352 Rahnella sp. Y9602 pantetheine-phosphate adenylyltransferase YP_004215065.1 4764034 D 741091 CDS YP_004215066.1 322835039 10215410 complement(4764525..4765334) 1 NC_015061.1 TIGRFAM: formamidopyrimidine-DNA glycosylase; KEGG: spe:Spro_4839 formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding; formamidopyrimidine-DNA glycosylase 4765334 10215410 Rahaq_4353 Rahnella sp. Y9602 formamidopyrimidine-DNA glycosylase YP_004215066.1 4764525 R 741091 CDS YP_004215067.1 322835040 10215411 complement(4765475..4765642) 1 NC_015061.1 KEGG: spe:Spro_4840 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; 50S ribosomal protein L33 4765642 10215411 Rahaq_4354 Rahnella sp. Y9602 50S ribosomal protein L33 YP_004215067.1 4765475 R 741091 CDS YP_004215068.1 322835041 10215412 complement(4765654..4765890) 1 NC_015061.1 KEGG: spe:Spro_4841 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; 50S ribosomal protein L28 4765890 10215412 Rahaq_4355 Rahnella sp. Y9602 50S ribosomal protein L28 YP_004215068.1 4765654 R 741091 CDS YP_004215069.1 322835042 10215413 complement(4766157..4766837) 1 NC_015061.1 KEGG: spe:Spro_4842 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; DNA repair protein RadC 4766837 10215413 Rahaq_4356 Rahnella sp. Y9602 DNA repair protein RadC YP_004215069.1 4766157 R 741091 CDS YP_004215070.1 322835043 10215414 4767022..4768239 1 NC_015061.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; KEGG: spe:Spro_4843 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 4768239 10215414 Rahaq_4357 Rahnella sp. Y9602 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase YP_004215070.1 4767022 D 741091 CDS YP_004215071.1 322835044 10215415 4768217..4768675 1 NC_015061.1 TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; KEGG: spe:Spro_4844 deoxyuridine 5'-triphosphate nucleotidohydrolase; PFAM: deoxyUTP pyrophosphatase; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 4768675 10215415 Rahaq_4358 Rahnella sp. Y9602 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut YP_004215071.1 4768217 D 741091 CDS YP_004215072.1 322835045 10215416 4768847..4769443 1 NC_015061.1 PFAM: regulatory protein TetR; KEGG: spe:Spro_4845 nucleoid occlusion protein; TetR family transcriptional regulator 4769443 10215416 Rahaq_4359 Rahnella sp. Y9602 TetR family transcriptional regulator YP_004215072.1 4768847 D 741091 CDS YP_004215073.1 322835046 10215417 complement(4769497..4770033) 1 NC_015061.1 KEGG: ypb:YPTS_1106 hypothetical protein; hypothetical protein 4770033 10215417 Rahaq_4360 Rahnella sp. Y9602 hypothetical protein YP_004215073.1 4769497 R 741091 CDS YP_004215074.1 322835047 10215418 complement(4770020..4772227) 1 NC_015061.1 PFAM: Protein of unknown function DUF2157, membrane; KEGG: ypb:YPTS_1107 hypothetical protein; hypothetical protein 4772227 10215418 Rahaq_4361 Rahnella sp. Y9602 hypothetical protein YP_004215074.1 4770020 R 741091 CDS YP_004215075.1 322835048 10215419 complement(4772259..4772900) 1 NC_015061.1 TIGRFAM: orotate phosphoribosyltransferase; KEGG: spe:Spro_4846 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; orotate phosphoribosyltransferase 4772900 10215419 Rahaq_4362 Rahnella sp. Y9602 orotate phosphoribosyltransferase YP_004215075.1 4772259 R 741091 CDS YP_004215076.1 322835049 10215420 complement(4772984..4773700) 1 NC_015061.1 TIGRFAM: ribonuclease PH; KEGG: spe:Spro_4847 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; ribonuclease PH 4773700 10215420 Rahaq_4363 Rahnella sp. Y9602 ribonuclease PH YP_004215076.1 4772984 R 741091 CDS YP_004215077.1 322835050 10215421 4773949..4774812 1 NC_015061.1 PFAM: YicC-like domain-containing protein; domain of unknown function DUF1732; KEGG: spe:Spro_4848 hypothetical protein; hypothetical protein 4774812 10215421 Rahaq_4364 Rahnella sp. Y9602 hypothetical protein YP_004215077.1 4773949 D 741091 CDS YP_004215078.1 322835051 10215422 complement(4774892..4776166) 1 NC_015061.1 KEGG: yen:YE1576 3-oxoacyl-(acyl carrier protein) synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; 3-oxoacyl-ACP synthase 4776166 10215422 Rahaq_4365 Rahnella sp. Y9602 3-oxoacyl-ACP synthase YP_004215078.1 4774892 R 741091 CDS YP_004215079.1 322835052 10215423 complement(4776312..4776932) 1 NC_015061.1 PFAM: regulatory protein TetR; KEGG: ppu:PP_3300 TetR family transcriptional regulator; TetR family transcriptional regulator 4776932 10215423 Rahaq_4366 Rahnella sp. Y9602 TetR family transcriptional regulator YP_004215079.1 4776312 R 741091 CDS YP_004215080.1 322835053 10215424 4777276..4777893 1 NC_015061.1 PFAM: Uncharacterised protein family UPF0126; KEGG: spe:Spro_4863 hypothetical protein; hypothetical protein 4777893 10215424 Rahaq_4367 Rahnella sp. Y9602 hypothetical protein YP_004215080.1 4777276 D 741091 CDS YP_004215081.1 322835054 10215425 complement(4777914..4779611) 1 NC_015061.1 PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; KEGG: ypb:YPTS_0039 NAD-dependent DNA ligase LigB; SMART: NAD-dependent DNA ligase ; Helix-hairpin-helix DNA-binding class 1; DNA ligase (NAD(+)) 4779611 10215425 Rahaq_4368 Rahnella sp. Y9602 DNA ligase (NAD(+)) YP_004215081.1 4777914 R 741091 CDS YP_004215082.1 322835055 10215426 4779890..4780513 1 NC_015061.1 SMART: guanylate kinase/L-type calcium channel region; TIGRFAM: guanylate kinase; KEGG: cko:CKO_05105 guanylate kinase; PFAM: guanylate kinase; guanylate kinase 4780513 10215426 Rahaq_4369 Rahnella sp. Y9602 guanylate kinase YP_004215082.1 4779890 D 741091 CDS YP_004215083.1 322835056 10215427 4780568..4780843 1 NC_015061.1 KEGG: ent:Ent638_0090 DNA-directed RNA polymerase, omega subunit; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; DNA-directed RNA polymerase subunit omega 4780843 10215427 Rahaq_4370 Rahnella sp. Y9602 DNA-directed RNA polymerase subunit omega YP_004215083.1 4780568 D 741091 CDS YP_004215084.1 322835057 10215428 4780863..4782971 1 NC_015061.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: RelA/SpoT family protein; KEGG: yen:YE0045 bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase; PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain-containing protein; amino acid-binding ACT domain protein; (p)ppGpp synthetase I SpoT/RelA 4782971 10215428 Rahaq_4371 Rahnella sp. Y9602 (p)ppGpp synthetase I SpoT/RelA YP_004215084.1 4780863 D 741091 CDS YP_004215085.1 322835058 10215429 4782977..4783675 1 NC_015061.1 KEGG: spe:Spro_4870 tRNA guanosine-2'-O-methyltransferase; PFAM: tRNA/rRNA methyltransferase (SpoU); tRNA guanosine-2'-O-methyltransferase 4783675 10215429 Rahaq_4372 Rahnella sp. Y9602 tRNA guanosine-2'-O-methyltransferase YP_004215085.1 4782977 D 741091 CDS YP_004215086.1 322835059 10215430 4783672..4785753 1 NC_015061.1 TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; KEGG: spe:Spro_4871 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase domain protein; ATP-dependent DNA helicase RecG 4785753 10215430 Rahaq_4373 Rahnella sp. Y9602 ATP-dependent DNA helicase RecG YP_004215086.1 4783672 D 741091 CDS YP_004215087.1 322835060 10215431 4785985..4787310 1 NC_015061.1 TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; KEGG: spe:Spro_4223 PTS system lactose/cellobiose family transporter subunit IIC; PFAM: phosphotransferase system EIIC; PTS system lactose/cellobiose family transporter subunit IIC 4787310 10215431 Rahaq_4374 Rahnella sp. Y9602 PTS system lactose/cellobiose family transporter subunit IIC YP_004215087.1 4785985 D 741091 CDS YP_004215088.1 322835061 10215432 complement(4787365..4788576) 1 NC_015061.1 KEGG: yen:YE0042 sodium/glutamate symport carrier protein; TIGRFAM: sodium/glutamate symporter; PFAM: sodium/glutamate symporter; sodium/glutamate symporter 4788576 10215432 Rahaq_4375 Rahnella sp. Y9602 sodium/glutamate symporter YP_004215088.1 4787365 R 741091 CDS YP_004215089.1 322835062 10215433 4788815..4790206 1 NC_015061.1 KEGG: dze:Dd1591_4150 uracil-xanthine permease; TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; uracil-xanthine permease 4790206 10215433 Rahaq_4376 Rahnella sp. Y9602 uracil-xanthine permease YP_004215089.1 4788815 D 741091 CDS YP_004215090.1 322835063 10215434 4790360..4792054 1 NC_015061.1 PFAM: AsmA family protein; KEGG: spe:Spro_4874 AsmA family protein; AsmA family protein 4792054 10215434 Rahaq_4377 Rahnella sp. Y9602 AsmA family protein YP_004215090.1 4790360 D 741091 CDS YP_004215091.1 322835064 10215435 complement(4792122..4793054) 1 NC_015061.1 KEGG: cko:CKO_03124 hypothetical protein; TIGRFAM: thioesterase domain protein; PFAM: Thioesterase ; GCN5-related N-acetyltransferase; thioesterase domain-containing protein 4793054 10215435 Rahaq_4378 Rahnella sp. Y9602 thioesterase domain-containing protein YP_004215091.1 4792122 R 741091 CDS YP_004215092.1 322835065 10215436 complement(4793088..4793525) 1 NC_015061.1 KEGG: spe:Spro_4877 D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; D-tyrosyl-tRNA(Tyr) deacylase 4793525 10215436 Rahaq_4379 Rahnella sp. Y9602 D-tyrosyl-tRNA(Tyr) deacylase YP_004215092.1 4793088 R 741091 CDS YP_004215093.1 322835066 10215437 complement(4793544..4794413) 1 NC_015061.1 KEGG: spe:Spro_4878 ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; ribonuclease BN 4794413 10215437 Rahaq_4380 Rahnella sp. Y9602 ribonuclease BN YP_004215093.1 4793544 R 741091 CDS YP_004215094.1 322835067 10215438 complement(4794425..4795012) 1 NC_015061.1 KEGG: plu:plu0241 phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 4795012 10215438 Rahaq_4381 Rahnella sp. Y9602 HAD-superfamily hydrolase YP_004215094.1 4794425 R 741091 CDS YP_004215095.1 322835068 10215439 complement(4795177..4797000) 1 NC_015061.1 KEGG: spe:Spro_4880 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; GTP-binding protein TypA 4797000 10215439 Rahaq_4382 Rahnella sp. Y9602 GTP-binding protein TypA YP_004215095.1 4795177 R 741091 CDS YP_004215096.1 322835069 10215440 4797472..4798881 1 NC_015061.1 KEGG: yen:YE0027 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; glutamine synthetase, type I 4798881 10215440 Rahaq_4383 Rahnella sp. Y9602 glutamine synthetase, type I YP_004215096.1 4797472 D 741091 CDS YP_004215097.1 322835070 10215441 4799134..4800183 1 NC_015061.1 KEGG: yen:YE0026 nitrogen regulation protein NR(II); PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; signal transduction histidine kinase, nitrogen specific, NtrB 4800183 10215441 Rahaq_4384 Rahnella sp. Y9602 signal transduction histidine kinase, nitrogen specific, NtrB YP_004215097.1 4799134 D 741091 CDS YP_004215098.1 322835071 10215442 4800191..4801603 1 NC_015061.1 TIGRFAM: nitrogen regulation protein NR(I); PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; KEGG: spe:Spro_4883 nitrogen regulation protein NR(I); SMART: response regulator receiver; AAA ATPase; Fis family transcriptional regulator 4801603 10215442 Rahaq_4385 Rahnella sp. Y9602 Fis family transcriptional regulator YP_004215098.1 4800191 D 741091 CDS YP_004215099.1 322835072 10215443 complement(4801668..4803041) 1 NC_015061.1 TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; KEGG: spe:Spro_4884 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 4803041 10215443 Rahaq_4386 Rahnella sp. Y9602 oxygen-independent coproporphyrinogen III oxidase YP_004215099.1 4801668 R 741091 CDS YP_004215100.1 322835073 10215444 complement(4803229..4803780) 1 NC_015061.1 PFAM: protein of unknown function DUF414; KEGG: yen:YE0023 hypothetical protein; hypothetical protein 4803780 10215444 Rahaq_4387 Rahnella sp. Y9602 hypothetical protein YP_004215100.1 4803229 R 741091 CDS YP_004215101.1 322835074 10215445 4804360..4805010 1 NC_015061.1 KEGG: spe:Spro_4886 ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein HSR1-related; ribosome biogenesis GTP-binding protein YsxC 4805010 10215445 Rahaq_4388 Rahnella sp. Y9602 ribosome biogenesis GTP-binding protein YsxC YP_004215101.1 4804360 D 741091 CDS YP_004215102.1 322835075 10215446 complement(4805361..4808165) 1 NC_015061.1 TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; KEGG: spe:Spro_4887 DNA polymerase I; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; 3'-5' exonuclease; DNA-directed DNA polymerase; DNA polymerase I 4808165 10215446 Rahaq_4389 Rahnella sp. Y9602 DNA polymerase I YP_004215102.1 4805361 R 741091 CDS YP_004215103.1 322835076 10215447 complement(4808553..4809176) 1 NC_015061.1 PFAM: DSBA oxidoreductase; KEGG: spe:Spro_4889 periplasmic protein disulfide isomerase I; DSBA oxidoreductase 4809176 10215447 Rahaq_4390 Rahnella sp. Y9602 DSBA oxidoreductase YP_004215103.1 4808553 R 741091 CDS YP_004215104.1 322835077 10215448 complement(4809222..4810208) 1 NC_015061.1 PFAM: aminoglycoside phosphotransferase; KEGG: spe:Spro_4890 serine/threonine protein kinase; aminoglycoside phosphotransferase 4810208 10215448 Rahaq_4391 Rahnella sp. Y9602 aminoglycoside phosphotransferase YP_004215104.1 4809222 R 741091 CDS YP_004215105.1 322835078 10215449 complement(4810301..4810570) 1 NC_015061.1 PFAM: protein of unknown function DUF1040; KEGG: spe:Spro_4891 hypothetical protein; hypothetical protein 4810570 10215449 Rahaq_4392 Rahnella sp. Y9602 hypothetical protein YP_004215105.1 4810301 R 741091 CDS YP_004215106.1 322835079 10215450 4810724..4811311 1 NC_015061.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: dze:Dd1591_4168 molybdopterin-guanine dinucleotide biosynthesis protein MobA; molybdopterin-guanine dinucleotide biosynthesis protein MobA 4811311 10215450 Rahaq_4393 Rahnella sp. Y9602 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_004215106.1 4810724 D 741091 CDS YP_004215107.1 322835080 10215451 4811308..4811841 1 NC_015061.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; KEGG: spe:Spro_4893 molybdopterin-guanine dinucleotide biosynthesis protein B; molybdopterin-guanine dinucleotide biosynthesis protein MobB 4811841 10215451 Rahaq_4394 Rahnella sp. Y9602 molybdopterin-guanine dinucleotide biosynthesis protein MobB YP_004215107.1 4811308 D 741091 CDS YP_004215108.1 322835081 10215456 4817551..4818240 1 NC_015061.1 KEGG: spe:Spro_4894 GntR domain-containing protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 4818240 10215456 Rahaq_4395 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004215108.1 4817551 D 741091 CDS YP_004215109.1 322835082 10215457 complement(4818223..4819233) 1 NC_015061.1 KEGG: spe:Spro_4896 transcriptional repressor RbsR; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator 4819233 10215457 Rahaq_4396 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004215109.1 4818223 R 741091 CDS YP_004215110.1 322835083 10215458 complement(4819234..4820163) 1 NC_015061.1 KEGG: spe:Spro_4897 ribokinase; TIGRFAM: ribokinase; PFAM: PfkB domain protein; ribokinase 4820163 10215458 Rahaq_4397 Rahnella sp. Y9602 ribokinase YP_004215110.1 4819234 R 741091 CDS YP_004215111.1 322835084 10215459 complement(4820231..4821121) 1 NC_015061.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE0011 D-ribose transporter subunit RbsB; LacI family transcriptional regulator 4821121 10215459 Rahaq_4398 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004215111.1 4820231 R 741091 CDS YP_004215112.1 322835085 10215460 complement(4821145..4822116) 1 NC_015061.1 PFAM: inner-membrane translocator; KEGG: yen:YE0010 ribose ABC transporter permease protein; inner-membrane translocator 4822116 10215460 Rahaq_4399 Rahnella sp. Y9602 inner-membrane translocator YP_004215112.1 4821145 R 741091 CDS YP_004215113.1 322835086 10215461 complement(4822123..4823628) 1 NC_015061.1 KEGG: spe:Spro_4900 D-ribose transporter ATP binding protein; PFAM: ABC transporter related; Mastoparan; SMART: AAA ATPase; ABC transporter 4823628 10215461 Rahaq_4400 Rahnella sp. Y9602 ABC transporter YP_004215113.1 4822123 R 741091 CDS YP_004215114.1 322835087 10215462 complement(4823636..4824055) 1 NC_015061.1 PFAM: RbsD or FucU transport; KEGG: spe:Spro_4901 D-ribose pyranase; transporter 4824055 10215462 Rahaq_4401 Rahnella sp. Y9602 transporter YP_004215114.1 4823636 R 741091 CDS YP_004215115.1 322835088 10215463 complement(4824271..4826139) 1 NC_015061.1 KEGG: spe:Spro_4902 potassium transport protein Kup; TIGRFAM: potassium uptake protein; PFAM: K potassium transporter; potassium uptake protein 4826139 10215463 Rahaq_4402 Rahnella sp. Y9602 potassium uptake protein YP_004215115.1 4824271 R 741091 CDS YP_004215116.1 322835089 10215464 4826407..4827915 1 NC_015061.1 KEGG: ypb:YPTS_4166 regulatory ATPase RavA; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATPase AAA 4827915 10215464 Rahaq_4403 Rahnella sp. Y9602 ATPase AAA YP_004215116.1 4826407 D 741091 CDS YP_004215117.1 322835090 10215465 4827918..4829387 1 NC_015061.1 SMART: von Willebrand factor type A; KEGG: yen:YE0005 hypothetical protein; von Willebrand factor A 4829387 10215465 Rahaq_4404 Rahnella sp. Y9602 von Willebrand factor A YP_004215117.1 4827918 D 741091 CDS YP_004215118.1 322835091 10215466 4829408..4829869 1 NC_015061.1 KEGG: spe:Spro_4906 DNA-binding transcriptional regulator AsnC; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 4829869 10215466 Rahaq_4405 Rahnella sp. Y9602 AsnC family transcriptional regulator YP_004215118.1 4829408 D 741091 CDS YP_004215119.1 322835092 10215467 4829958..4830401 1 NC_015061.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: ypb:YPTS_4170 flavodoxin; flavodoxin/nitric oxide synthase 4830401 10215467 Rahaq_4406 Rahnella sp. Y9602 flavodoxin/nitric oxide synthase YP_004215119.1 4829958 D 741091 CDS YP_004215120.1 322835093 10215468 4830781..4832670 1 NC_015061.1 KEGG: spe:Spro_4908 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A; glucose inhibited division protein A 4832670 10215468 Rahaq_4407 Rahnella sp. Y9602 glucose inhibited division protein A YP_004215120.1 4830781 D 741091 CDS YP_004215121.1 322835094 10215469 4832801..4833421 1 NC_015061.1 KEGG: yen:YE4214 16S rRNA methyltransferase GidB; TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; methyltransferase GidB 4833421 10215469 Rahaq_4408 Rahnella sp. Y9602 methyltransferase GidB YP_004215121.1 4832801 D 741091 CDS YP_004215122.1 322835095 10215470 4834071..4834469 1 NC_015061.1 PFAM: ATP synthase I chain; KEGG: spe:Spro_0001 F0F1 ATP synthase subunit I; ATP synthase I chain 4834469 10215470 Rahaq_4409 Rahnella sp. Y9602 ATP synthase I chain YP_004215122.1 4834071 D 741091 CDS YP_004215123.1 322835096 10215471 4834492..4835274 1 NC_015061.1 KEGG: dda:Dd703_3987 ATP synthase F0 A subunit; TIGRFAM: ATP synthase F0 A subunit; PFAM: H+transporting two-sector ATPase A subunit; ATP synthase F0 A subunit 4835274 10215471 Rahaq_4410 Rahnella sp. Y9602 ATP synthase F0 A subunit YP_004215123.1 4834492 D 741091 CDS YP_004215124.1 322835097 10215472 4835324..4835563 1 NC_015061.1 KEGG: dze:Dd1591_4189 F0F1 ATP synthase subunit C; TIGRFAM: ATP synthase F0 C subunit; PFAM: H+transporting two-sector ATPase C subunit; ATP synthase F0 C subunit 4835563 10215472 Rahaq_4411 Rahnella sp. Y9602 ATP synthase F0 C subunit YP_004215124.1 4835324 D 741091 CDS YP_004215125.1 322835098 10215473 4835629..4836099 1 NC_015061.1 KEGG: etr:ETAE_3529 F0F1-type ATP synthase, subunit B; TIGRFAM: ATP synthase F0 B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; ATP synthase F0 subunit B 4836099 10215473 Rahaq_4412 Rahnella sp. Y9602 ATP synthase F0 subunit B YP_004215125.1 4835629 D 741091 CDS YP_004215126.1 322835099 10215474 4836114..4836647 1 NC_015061.1 KEGG: yen:YE4209 F0F1 ATP synthase subunit delta; TIGRFAM: ATP synthase F1 subunit delta; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; ATP synthase F1 subunit delta 4836647 10215474 Rahaq_4413 Rahnella sp. Y9602 ATP synthase F1 subunit delta YP_004215126.1 4836114 D 741091 CDS YP_004215127.1 322835100 10215475 4836660..4838201 1 NC_015061.1 KEGG: pwa:Pecwa_4545 F0F1 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1 subunit alpha; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; H+transporting two-sector ATPase alpha/subunit beta domain protein; ATP synthase F1 subunit alpha 4838201 10215475 Rahaq_4414 Rahnella sp. Y9602 ATP synthase F1 subunit alpha YP_004215127.1 4836660 D 741091 CDS YP_004215128.1 322835101 10215476 4838273..4839136 1 NC_015061.1 KEGG: spe:Spro_0007 F0F1 ATP synthase subunit gamma; TIGRFAM: ATP synthase F1 subunit gamma; PFAM: H+transporting two-sector ATPase subunit gamma; ATP synthase F1 subunit gamma 4839136 10215476 Rahaq_4415 Rahnella sp. Y9602 ATP synthase F1 subunit gamma YP_004215128.1 4838273 D 741091 CDS YP_004215129.1 322835102 10215477 4839169..4840551 1 NC_015061.1 TIGRFAM: ATP synthase F1 subunit beta; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; H+transporting two-sector ATPase alpha/subunit beta domain protein; KEGG: spe:Spro_0008 F0F1 ATP synthase subunit beta; SMART: AAA ATPase; ATP synthase F1 subunit beta 4840551 10215477 Rahaq_4416 Rahnella sp. Y9602 ATP synthase F1 subunit beta YP_004215129.1 4839169 D 741091 CDS YP_004215130.1 322835103 10215478 4840579..4841001 1 NC_015061.1 KEGG: ddd:Dda3937_00144 F1 sector of membrane-bound ATP synthase, subunit epsilon; TIGRFAM: ATP synthase F1 subunit epsilon; PFAM: ATPase, F1 complex, delta/subunit epsilon-like; ATP synthase F1 subunit epsilon 4841001 10215478 Rahaq_4417 Rahnella sp. Y9602 ATP synthase F1 subunit epsilon YP_004215130.1 4840579 D 741091 CDS YP_004215131.1 322835104 10215479 4841273..4842643 1 NC_015061.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; KEGG: enc:ECL_05151 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; UDP-N-acetylglucosamine pyrophosphorylase 4842643 10215479 Rahaq_4418 Rahnella sp. Y9602 UDP-N-acetylglucosamine pyrophosphorylase YP_004215131.1 4841273 D 741091 CDS YP_004215132.1 322835105 10215480 4842776..4844605 1 NC_015061.1 KEGG: spe:Spro_0011 glucosamine--fructose-6-phosphate aminotransferase; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); glucosamine/fructose-6-phosphate aminotransferase 4844605 10215480 Rahaq_4419 Rahnella sp. Y9602 glucosamine/fructose-6-phosphate aminotransferase YP_004215132.1 4842776 D 741091 CDS YP_004215133.1 322835106 10215481 4844783..4845655 1 NC_015061.1 KEGG: pam:PANA_4213 RluF; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; pseudouridine synthase 4845655 10215481 Rahaq_4420 Rahnella sp. Y9602 pseudouridine synthase YP_004215133.1 4844783 D 741091 CDS YP_004215134.1 322835107 10215482 4845872..4846912 1 NC_015061.1 KEGG: spe:Spro_0012 phosphate ABC transporter periplasmic substrate-binding protein PstS; TIGRFAM: phosphate ABC transporter periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; phosphate ABC transporter substrate-binding protein 4846912 10215482 Rahaq_4421 Rahnella sp. Y9602 phosphate ABC transporter substrate-binding protein YP_004215134.1 4845872 D 741091 CDS YP_004215135.1 322835108 10215483 4847007..4847963 1 NC_015061.1 KEGG: spe:Spro_0013 phosphate transporter permease subunit PstC; TIGRFAM: phosphate ABC transporter inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 4847963 10215483 Rahaq_4422 Rahnella sp. Y9602 phosphate ABC transporter permease YP_004215135.1 4847007 D 741091 CDS YP_004215136.1 322835109 10215484 4847965..4848852 1 NC_015061.1 KEGG: yen:YE4199 phosphate transporter permease subunit PtsA; TIGRFAM: phosphate ABC transporter inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 4848852 10215484 Rahaq_4423 Rahnella sp. Y9602 phosphate ABC transporter permease YP_004215136.1 4847965 D 741091 CDS YP_004215137.1 322835110 10215485 4848945..4849712 1 NC_015061.1 TIGRFAM: phosphate ABC transporter ATPase subunit; PFAM: ABC transporter related; KEGG: ypb:YPTS_4189 phosphate transporter ATP-binding protein; SMART: AAA ATPase; phosphate ABC transporter ATPase 4849712 10215485 Rahaq_4424 Rahnella sp. Y9602 phosphate ABC transporter ATPase YP_004215137.1 4848945 D 741091 CDS YP_004215138.1 322835111 10215486 4849723..4850454 1 NC_015061.1 KEGG: spe:Spro_0016 transcriptional regulator PhoU; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; phosphate uptake regulator PhoU 4850454 10215486 Rahaq_4425 Rahnella sp. Y9602 phosphate uptake regulator PhoU YP_004215138.1 4849723 D 741091 CDS YP_004215139.1 322835112 10215487 complement(4850539..4851231) 1 NC_015061.1 PFAM: regulatory protein TetR; KEGG: spe:Spro_2513 TetR family transcriptional regulator; TetR family transcriptional regulator 4851231 10215487 Rahaq_4426 Rahnella sp. Y9602 TetR family transcriptional regulator YP_004215139.1 4850539 R 741091 CDS YP_004215140.1 322835113 10215488 4851342..4852172 1 NC_015061.1 PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: kva:Kvar_2145 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein TIM barrel 4852172 10215488 Rahaq_4427 Rahnella sp. Y9602 xylose isomerase domain-containing protein TIM barrel YP_004215140.1 4851342 D 741091 CDS YP_004215141.1 322835114 10215489 complement(4852162..4852827) 1 NC_015061.1 KEGG: spe:Spro_0020 6-phosphogluconate phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 4852827 10215489 Rahaq_4428 Rahnella sp. Y9602 HAD-superfamily hydrolase YP_004215141.1 4852162 R 741091 CDS YP_004215142.1 322835115 10215490 4852980..4854317 1 NC_015061.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: spe:Spro_0021 xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease 4854317 10215490 Rahaq_4429 Rahnella sp. Y9602 xanthine/uracil/vitamin C permease YP_004215142.1 4852980 D 741091 CDS YP_004215143.1 322835116 10215491 complement(4854392..4854961) 1 NC_015061.1 PFAM: NADPH-dependent FMN reductase; KEGG: spe:Spro_0023 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 4854961 10215491 Rahaq_4430 Rahnella sp. Y9602 NADPH-dependent FMN reductase YP_004215143.1 4854392 R 741091 CDS YP_004215144.1 322835117 10215492 complement(4855053..4855778) 1 NC_015061.1 KEGG: spe:Spro_0024 hypothetical protein; hypothetical protein 4855778 10215492 Rahaq_4431 Rahnella sp. Y9602 hypothetical protein YP_004215144.1 4855053 R 741091 CDS YP_004215145.1 322835118 10215493 4856102..4857997 1 NC_015061.1 KEGG: yen:YE4183 methyl-accepting chemotaxis receptor protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4857997 10215493 Rahaq_4432 Rahnella sp. Y9602 methyl-accepting chemotaxis sensory transducer YP_004215145.1 4856102 D 741091 CDS YP_004215146.1 322835119 10215494 complement(4858073..4858960) 1 NC_015061.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rsl:RPSI07_0113 transcription regulator protein, LysR family (AaeR); LysR family transcriptional regulator 4858960 10215494 Rahaq_4433 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004215146.1 4858073 R 741091 CDS YP_004215147.1 322835120 10215495 4858986..4859660 1 NC_015061.1 PFAM: dTDP-4-dehydrorhamnose reductase; KEGG: kva:Kvar_0679 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 4859660 10215495 Rahaq_4434 Rahnella sp. Y9602 dTDP-4-dehydrorhamnose reductase YP_004215147.1 4858986 D 741091 CDS YP_004215148.1 322835121 10215496 complement(4859732..4861096) 1 NC_015061.1 KEGG: spe:Spro_0027 tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related; tRNA modification GTPase TrmE 4861096 10215496 Rahaq_4435 Rahnella sp. Y9602 tRNA modification GTPase TrmE YP_004215148.1 4859732 R 741091 CDS YP_004215149.1 322835122 10215497 complement(4861209..4862843) 1 NC_015061.1 KEGG: spe:Spro_0028 inner membrane protein translocase component YidC; TIGRFAM: membrane protein insertase, YidC/Oxa1 family domain containing; membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein; YidC/Oxa1 family membrane protein insertase 4862843 10215497 Rahaq_4436 Rahnella sp. Y9602 YidC/Oxa1 family membrane protein insertase YP_004215149.1 4861209 R 741091 CDS YP_004215150.1 322835123 10215498 complement(4862846..4863103) 1 NC_015061.1 PFAM: protein of unknown function DUF37; KEGG: ddd:Dda3937_01062 hypothetical protein; hypothetical protein 4863103 10215498 Rahaq_4437 Rahnella sp. Y9602 hypothetical protein YP_004215150.1 4862846 R 741091 CDS YP_004215151.1 322835124 10215499 complement(4863067..4863393) 1 NC_015061.1 KEGG: yen:YE4176 ribonuclease P; TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; ribonuclease P 4863393 10215499 Rahaq_4438 Rahnella sp. Y9602 ribonuclease P YP_004215151.1 4863067 R 741091 CDS YP_004215152.1 322835125 10215500 complement(4863445..4863585) 1 NC_015061.1 KEGG: pwa:Pecwa_4618 50S ribosomal protein L34; TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34; 50S ribosomal protein L34 4863585 10215500 Rahaq_4439 Rahnella sp. Y9602 50S ribosomal protein L34 YP_004215152.1 4863445 R 741091 CDS YP_004215153.1 322835127 10216161 208..1485 1 NC_015062.1 KEGG: eca:ECA2240 lipoprotein; manually curated; PFAM: protein of unknown function DUF187; hypothetical protein 1485 10216161 Rahaq_4440 Rahnella sp. Y9602 hypothetical protein YP_004215153.1 208 D 741091 CDS YP_004215154.1 322835128 10215556 complement(1554..3764) 1 NC_015062.1 KEGG: ebi:EbC_03350 TonB-dependent receptor for Fe(III)-coprogen, Fe(III)-ferrioxamine B and Fe(III)-rhodotrulic acid; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; TonB-dependent siderophore receptor 3764 10215556 Rahaq_4441 Rahnella sp. Y9602 TonB-dependent siderophore receptor YP_004215154.1 1554 R 741091 CDS YP_004215155.1 322835129 10215557 complement(3985..5379) 1 NC_015062.1 KEGG: ebi:EbC_21120 conserved uncharacterized protein; hypothetical protein 5379 10215557 Rahaq_4442 Rahnella sp. Y9602 hypothetical protein YP_004215155.1 3985 R 741091 CDS YP_004215156.1 322835130 10215558 5515..6147 1 NC_015062.1 KEGG: ent:Ent638_2177 hypothetical protein; hypothetical protein 6147 10215558 Rahaq_4443 Rahnella sp. Y9602 hypothetical protein YP_004215156.1 5515 D 741091 CDS YP_004215157.1 322835131 10215559 complement(6200..6595) 1 NC_015062.1 PFAM: YebG family protein; KEGG: ent:Ent638_1887 YebG family protein; hypothetical protein 6595 10215559 Rahaq_4444 Rahnella sp. Y9602 hypothetical protein YP_004215157.1 6200 R 741091 CDS YP_004215158.1 322835132 10215560 6789..7253 1 NC_015062.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pam:PANA_4172 hypothetical protein; N-acetyltransferase GCN5 7253 10215560 Rahaq_4445 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004215158.1 6789 D 741091 CDS YP_004215159.1 322835133 10215562 complement(7369..8244) 1 NC_015062.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ent:Ent638_1889 LysR family transcriptional regulator; LysR family transcriptional regulator 8244 10215562 Rahaq_4447 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004215159.1 7369 R 741091 CDS YP_004215160.1 322835134 10215563 8359..9348 1 NC_015062.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ent:Ent638_1888 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 9348 10215563 Rahaq_4448 Rahnella sp. Y9602 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004215160.1 8359 D 741091 CDS YP_004215161.1 322835135 10215564 complement(9392..9790) 1 NC_015062.1 KEGG: pct:PC1_0653 hypothetical protein; hypothetical protein 9790 10215564 Rahaq_4449 Rahnella sp. Y9602 hypothetical protein YP_004215161.1 9392 R 741091 CDS YP_004215162.1 322835136 10215565 complement(9794..10519) 1 NC_015062.1 PFAM: protein of unknown function DUF81; KEGG: ddc:Dd586_0859 protein of unknown function DUF81; hypothetical protein 10519 10215565 Rahaq_4450 Rahnella sp. Y9602 hypothetical protein YP_004215162.1 9794 R 741091 CDS YP_004215163.1 322835137 10215566 10627..11517 1 NC_015062.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpd:BURPS668_A0906 LysR family transcriptional regulator; LysR family transcriptional regulator 11517 10215566 Rahaq_4451 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004215163.1 10627 D 741091 CDS YP_004215164.1 322835138 10215567 complement(11508..13178) 1 NC_015062.1 KEGG: set:SEN3426 trehalase; PFAM: glycoside hydrolase family 37; alpha,alpha-trehalase 13178 10215567 Rahaq_4452 Rahnella sp. Y9602 alpha,alpha-trehalase YP_004215164.1 11508 R 741091 CDS YP_004215165.1 322835139 10215568 complement(13206..14612) 1 NC_015062.1 TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; KEGG: pam:PANA_2235 OtsA; PFAM: glycosyl transferase family 20; alpha,alpha-trehalose-phosphate synthase (UDP-forming) 14612 10215568 Rahaq_4453 Rahnella sp. Y9602 alpha,alpha-trehalose-phosphate synthase (UDP-forming) YP_004215165.1 13206 R 741091 CDS YP_004215166.1 322835140 10215569 complement(14609..15403) 1 NC_015062.1 KEGG: pam:PANA_2236 OtsB; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; trehalose-phosphatase 15403 10215569 Rahaq_4454 Rahnella sp. Y9602 trehalose-phosphatase YP_004215166.1 14609 R 741091 CDS YP_004215167.1 322835141 10215570 complement(15585..15950) 1 NC_015062.1 PFAM: Protein of unknown function DUF2493; KEGG: kva:Kvar_3148 protein of unknown function DUF2493; hypothetical protein 15950 10215570 Rahaq_4455 Rahnella sp. Y9602 hypothetical protein YP_004215167.1 15585 R 741091 CDS YP_004215168.1 322835142 10215571 complement(15982..17655) 1 NC_015062.1 PFAM: Na+/Picotransporter; PhoU family protein; KEGG: kva:Kvar_3147 Na/Pi-cotransporter II-related protein; Na+/Picotransporter 17655 10215571 Rahaq_4456 Rahnella sp. Y9602 Na+/Picotransporter YP_004215168.1 15982 R 741091 CDS YP_004215169.1 322835143 10215572 complement(17777..20491) 1 NC_015062.1 KEGG: kpe:KPK_3276 magnesium-translocating P-type ATPase; TIGRFAM: magnesium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; magnesium-translocating P-type ATPase 20491 10215572 Rahaq_4457 Rahnella sp. Y9602 magnesium-translocating P-type ATPase YP_004215169.1 17777 R 741091 CDS YP_004215170.1 322835144 10215573 complement(20800..21045) 1 NC_015062.1 KEGG: kpe:KPK_3274 hypothetical protein; hypothetical protein 21045 10215573 Rahaq_4458 Rahnella sp. Y9602 hypothetical protein YP_004215170.1 20800 R 741091 CDS YP_004215171.1 322835145 10215574 complement(21391..22071) 1 NC_015062.1 PFAM: Oligogalacturonate-specific porin; KEGG: ent:Ent638_3298 oligogalacturonate-specific porin; oligogalacturonate-specific porin 22071 10215574 Rahaq_4459 Rahnella sp. Y9602 oligogalacturonate-specific porin YP_004215171.1 21391 R 741091 CDS YP_004215172.1 322835146 10215575 complement(22140..24308) 1 NC_015062.1 KEGG: pwa:Pecwa_4562 exopolygalacturonate lyase; exopolygalacturonate lyase 24308 10215575 Rahaq_4460 Rahnella sp. Y9602 exopolygalacturonate lyase YP_004215172.1 22140 R 741091 CDS YP_004215173.1 322835147 10215576 complement(24394..25959) 1 NC_015062.1 KEGG: kva:Kvar_1707 oligogalacturonide transporter; oligogalacturonide transporter 25959 10215576 Rahaq_4461 Rahnella sp. Y9602 oligogalacturonide transporter YP_004215173.1 24394 R 741091 CDS YP_004215174.1 322835148 10215577 complement(26346..27326) 1 NC_015062.1 PFAM: protein of unknown function DUF535; KEGG: ebi:EbC_03470 virulence protein; hypothetical protein 27326 10215577 Rahaq_4462 Rahnella sp. Y9602 hypothetical protein YP_004215174.1 26346 R 741091 CDS YP_004215175.1 322835149 10215578 27623..28360 1 NC_015062.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: kpu:KP1_2232 acid phosphatase; SMART: phosphoesterase PA-phosphatase related; acid phosphatase 28360 10215578 Rahaq_4463 Rahnella sp. Y9602 acid phosphatase YP_004215175.1 27623 D 741091 CDS YP_004215176.1 322835150 10215579 28529..29020 1 NC_015062.1 KEGG: ctu:Ctu_40860 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; type VI secretion system effector 29020 10215579 Rahaq_4464 Rahnella sp. Y9602 type VI secretion system effector YP_004215176.1 28529 D 741091 CDS YP_004215177.1 322835151 10215580 29033..29557 1 NC_015062.1 KEGG: ctu:Ctu_40850 hypothetical protein; hypothetical protein 29557 10215580 Rahaq_4465 Rahnella sp. Y9602 hypothetical protein YP_004215177.1 29033 D 741091 CDS YP_004215178.1 322835152 10215581 29535..29846 1 NC_015062.1 KEGG: zmn:Za10_0201 histidine kinase; hypothetical protein 29846 10215581 Rahaq_4466 Rahnella sp. Y9602 hypothetical protein YP_004215178.1 29535 D 741091 CDS YP_004215179.1 322835153 10215582 complement(29898..30980) 1 NC_015062.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: spe:Spro_2371 hypothetical protein; iron-containing alcohol dehydrogenase 30980 10215582 Rahaq_4467 Rahnella sp. Y9602 iron-containing alcohol dehydrogenase YP_004215179.1 29898 R 741091 CDS YP_004215180.1 322835154 10215583 31202..32269 1 NC_015062.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: spe:Spro_2370 hypothetical protein; LacI family transcriptional regulator 32269 10215583 Rahaq_4468 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004215180.1 31202 D 741091 CDS YP_004215181.1 322835155 10215584 32279..33526 1 NC_015062.1 KEGG: spe:Spro_2369 hypothetical protein; hypothetical protein 33526 10215584 Rahaq_4469 Rahnella sp. Y9602 hypothetical protein YP_004215181.1 32279 D 741091 CDS YP_004215182.1 322835156 10215585 complement(33547..34470) 1 NC_015062.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: eta:ETA_33700 hypothetical protein; hypothetical protein 34470 10215585 Rahaq_4470 Rahnella sp. Y9602 hypothetical protein YP_004215182.1 33547 R 741091 CDS YP_004215183.1 322835157 10215586 34611..35333 1 NC_015062.1 KEGG: spe:Spro_2330 lipoprotein; lipoprotein 35333 10215586 Rahaq_4471 Rahnella sp. Y9602 lipoprotein YP_004215183.1 34611 D 741091 CDS YP_004215184.1 322835158 10215587 35463..36908 1 NC_015062.1 KEGG: pct:PC1_0027 major facilitator superfamily MFS_1; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA subfamily drug resistance transporter 36908 10215587 Rahaq_4472 Rahnella sp. Y9602 EmrB/QacA subfamily drug resistance transporter YP_004215184.1 35463 D 741091 CDS YP_004215185.1 322835159 10215588 36959..37849 1 NC_015062.1 PFAM: dihydrodipicolinate synthetase; KEGG: plu:plu1530 hypothetical protein; dihydrodipicolinate synthetase 37849 10215588 Rahaq_4473 Rahnella sp. Y9602 dihydrodipicolinate synthetase YP_004215185.1 36959 D 741091 CDS YP_004215186.1 322835160 10215589 38093..38500 1 NC_015062.1 KEGG: mxa:MXAN_0698 hypothetical protein; hypothetical protein 38500 10215589 Rahaq_4474 Rahnella sp. Y9602 hypothetical protein YP_004215186.1 38093 D 741091 CDS YP_004215187.1 322835161 10215590 38710..40059 1 NC_015062.1 KEGG: ebi:EbC_20980 virulence effector protein SrfA; virulence effector protein SrfA 40059 10215590 Rahaq_4475 Rahnella sp. Y9602 virulence effector protein SrfA YP_004215187.1 38710 D 741091 CDS YP_004215188.1 322835162 10215591 40064..43036 1 NC_015062.1 PFAM: virulence protein SrfB; KEGG: pwa:Pecwa_2382 virulence protein SrfB; virulence protein SrfB 43036 10215591 Rahaq_4476 Rahnella sp. Y9602 virulence protein SrfB YP_004215188.1 40064 D 741091 CDS YP_004215189.1 322835163 10215592 43033..45408 1 NC_015062.1 PFAM: Virulence effector, SrfC; KEGG: dda:Dd703_1880 virulence factor; Virulence effector, SrfC 45408 10215592 Rahaq_4477 Rahnella sp. Y9602 Virulence effector, SrfC YP_004215189.1 43033 D 741091 CDS YP_004215190.1 322835164 10215593 45601..46650 1 NC_015062.1 PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: spe:Spro_3568 fructose-bisphosphate aldolase; deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase 46650 10215593 Rahaq_4478 Rahnella sp. Y9602 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_004215190.1 45601 D 741091 CDS YP_004215191.1 322835165 10215594 complement(46715..47395) 1 NC_015062.1 PFAM: hypothetical protein; KEGG: ebi:EbC_11790 ThiJ/PfpI domain protein; hypothetical protein 47395 10215594 Rahaq_4479 Rahnella sp. Y9602 hypothetical protein YP_004215191.1 46715 R 741091 CDS YP_004215192.1 322835166 10215595 complement(47509..48135) 1 NC_015062.1 PFAM: regulatory protein TetR; KEGG: sgl:SG0229 transcriptional regulator; TetR family transcriptional regulator 48135 10215595 Rahaq_4480 Rahnella sp. Y9602 TetR family transcriptional regulator YP_004215192.1 47509 R 741091 CDS YP_004215193.1 322835167 10215596 48322..50007 1 NC_015062.1 PFAM: Heat shock protein 70; KEGG: esa:ESA_02869 hypothetical protein; Heat shock protein 70 50007 10215596 Rahaq_4481 Rahnella sp. Y9602 Heat shock protein 70 YP_004215193.1 48322 D 741091 CDS YP_004215194.1 322835168 10215597 50012..50584 1 NC_015062.1 PFAM: heat shock protein DnaJ domain protein; KEGG: esa:ESA_02868 hypothetical protein; heat shock protein DnaJ domain-containing protein 50584 10215597 Rahaq_4482 Rahnella sp. Y9602 heat shock protein DnaJ domain-containing protein YP_004215194.1 50012 D 741091 CDS YP_004215195.1 322835169 10215598 50613..51956 1 NC_015062.1 KEGG: ctu:Ctu_10100 hypothetical protein; hypothetical protein 51956 10215598 Rahaq_4483 Rahnella sp. Y9602 hypothetical protein YP_004215195.1 50613 D 741091 CDS YP_004215196.1 322835170 10215599 complement(51989..53470) 1 NC_015062.1 KEGG: epy:EpC_14960 cytoplasmic alpha-amylase; PFAM: alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; alpha amylase 53470 10215599 Rahaq_4484 Rahnella sp. Y9602 alpha amylase YP_004215196.1 51989 R 741091 CDS YP_004215197.1 322835171 10215600 complement(53593..55095) 1 NC_015062.1 KEGG: yen:YE3594 proline/glycine betaine transporter; TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: Osmosensory transporter coiled coil; metabolite/H+ symporter, major facilitator superfamily (MFS) 55095 10215600 Rahaq_4485 Rahnella sp. Y9602 metabolite/H+ symporter, major facilitator superfamily (MFS) YP_004215197.1 53593 R 741091 CDS YP_004215198.1 322835172 10215601 55388..56569 1 NC_015062.1 KEGG: kpu:KP1_4543 translocation protein TolB precursor; oligogalacturonide lyase 56569 10215601 Rahaq_4486 Rahnella sp. Y9602 oligogalacturonide lyase YP_004215198.1 55388 D 741091 CDS YP_004215199.1 322835173 10215602 56573..56893 1 NC_015062.1 PFAM: cupin; KEGG: kva:Kvar_0815 cupin 2 conserved barrel domain protein; cupin 56893 10215602 Rahaq_4487 Rahnella sp. Y9602 cupin YP_004215199.1 56573 D 741091 CDS YP_004215200.1 322835174 10215603 complement(56961..57599) 1 NC_015062.1 PFAM: ribose/galactose isomerase; KEGG: ypb:YPTS_2039 hypothetical protein; ribose/galactose isomerase 57599 10215603 Rahaq_4488 Rahnella sp. Y9602 ribose/galactose isomerase YP_004215200.1 56961 R 741091 CDS YP_004215201.1 322835175 10215604 complement(57668..58429) 1 NC_015062.1 KEGG: kva:Kvar_0805 2-deoxy-D-gluconate 3-dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; 2-deoxy-D-gluconate 3-dehydrogenase 58429 10215604 Rahaq_4489 Rahnella sp. Y9602 2-deoxy-D-gluconate 3-dehydrogenase YP_004215201.1 57668 R 741091 CDS YP_004215202.1 322835176 10215605 58637..58933 1 NC_015062.1 KEGG: bfo:BRAFLDRAFT_127718 hypothetical protein; hypothetical protein 58933 10215605 Rahaq_4490 Rahnella sp. Y9602 hypothetical protein YP_004215202.1 58637 D 741091 CDS YP_004215203.1 322835177 10215606 complement(58826..59182) 1 NC_015062.1 KEGG: spe:Spro_1931 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 59182 10215606 Rahaq_4491 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004215203.1 58826 R 741091 CDS YP_004215204.1 322835178 10215607 59539..60762 1 NC_015062.1 KEGG: spe:Spro_1930 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 60762 10215607 Rahaq_4492 Rahnella sp. Y9602 RND family efflux transporter MFP subunit YP_004215204.1 59539 D 741091 CDS YP_004215205.1 322835179 10215608 60779..63931 1 NC_015062.1 KEGG: spe:Spro_1929 hydrophobe/amphiphile efflux-1 (HAE1) family protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 63931 10215608 Rahaq_4493 Rahnella sp. Y9602 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_004215205.1 60779 D 741091 CDS YP_004215206.1 322835180 10215609 complement(64035..64520) 1 NC_015062.1 PFAM: protein of unknown function UPF0074; KEGG: spe:Spro_1928 BadM/Rrf2 family transcriptional regulator; BadM/Rrf2 family transcriptional regulator 64520 10215609 Rahaq_4494 Rahnella sp. Y9602 BadM/Rrf2 family transcriptional regulator YP_004215206.1 64035 R 741091 CDS YP_004215207.1 322835181 10215611 65508..65645 1 NC_015062.1 hypothetical protein 65645 10215611 Rahaq_4496 Rahnella sp. Y9602 hypothetical protein YP_004215207.1 65508 D 741091 CDS YP_004215208.1 322835182 10215612 65786..66610 1 NC_015062.1 KEGG: afr:AFE_1562 hypothetical protein; hypothetical protein 66610 10215612 Rahaq_4497 Rahnella sp. Y9602 hypothetical protein YP_004215208.1 65786 D 741091 CDS YP_004215209.1 322835183 10215613 66607..67428 1 NC_015062.1 KEGG: afr:AFE_1561 hypothetical protein; hypothetical protein 67428 10215613 Rahaq_4498 Rahnella sp. Y9602 hypothetical protein YP_004215209.1 66607 D 741091 CDS YP_004215210.1 322835184 10215614 67504..67644 1 NC_015062.1 hypothetical protein 67644 10215614 Rahaq_4499 Rahnella sp. Y9602 hypothetical protein YP_004215210.1 67504 D 741091 CDS YP_004215211.1 322835185 10215615 complement(67787..67987) 1 NC_015062.1 KEGG: ent:Ent638_4271 hypothetical protein; hypothetical protein 67987 10215615 Rahaq_4500 Rahnella sp. Y9602 hypothetical protein YP_004215211.1 67787 R 741091 CDS YP_004215212.1 322835186 10215616 68653..70221 1 NC_015062.1 KEGG: zmo:ZMO0352 hypothetical protein; hypothetical protein 70221 10215616 Rahaq_4501 Rahnella sp. Y9602 hypothetical protein YP_004215212.1 68653 D 741091 CDS YP_004215213.1 322835187 10215618 complement(70823..72112) 1 NC_015062.1 KEGG: ent:Ent638_2216 hypothetical protein; hypothetical protein 72112 10215618 Rahaq_4503 Rahnella sp. Y9602 hypothetical protein YP_004215213.1 70823 R 741091 CDS YP_004215214.1 322835188 10215619 complement(72171..72407) 1 NC_015062.1 KEGG: ent:Ent638_2217 hypothetical protein; hypothetical protein 72407 10215619 Rahaq_4504 Rahnella sp. Y9602 hypothetical protein YP_004215214.1 72171 R 741091 CDS YP_004215215.1 322835189 10215620 complement(72532..73206) 1 NC_015062.1 KEGG: ent:Ent638_2218 hypothetical protein; hypothetical protein 73206 10215620 Rahaq_4505 Rahnella sp. Y9602 hypothetical protein YP_004215215.1 72532 R 741091 CDS YP_004215216.1 322835190 10215621 complement(73523..76708) 1 NC_015062.1 PFAM: protein of unknown function DUF1983; Fibronectin type III domain protein; KEGG: ent:Ent638_2219 fibronectin, type III domain-containing protein; hypothetical protein 76708 10215621 Rahaq_4506 Rahnella sp. Y9602 hypothetical protein YP_004215216.1 73523 R 741091 CDS YP_004215217.1 322835191 10215622 complement(76769..77347) 1 NC_015062.1 PFAM: lambda tail assembly I; KEGG: ent:Ent638_2220 bacteriophage lambda tail assembly I; lambda tail assembly I 77347 10215622 Rahaq_4507 Rahnella sp. Y9602 lambda tail assembly I YP_004215217.1 76769 R 741091 CDS YP_004215218.1 322835192 10215623 complement(77400..77807) 1 NC_015062.1 KEGG: ebi:EbC_32310 hypothetical protein; hypothetical protein 77807 10215623 Rahaq_4508 Rahnella sp. Y9602 hypothetical protein YP_004215218.1 77400 R 741091 CDS YP_004215219.1 322835193 10215624 complement(77868..78599) 1 NC_015062.1 KEGG: enc:ECL_01713 GP19; PFAM: NLP/P60 protein; SMART: Mov34/MPN/PAD-1 family protein; NLP/P60 protein 78599 10215624 Rahaq_4509 Rahnella sp. Y9602 NLP/P60 protein YP_004215219.1 77868 R 741091 CDS YP_004215220.1 322835194 10215625 complement(78602..80260) 1 NC_015062.1 KEGG: ent:Ent638_2223 phage minor tail protein L; TIGRFAM: phage minor tail protein L; PFAM: minor tail protein L; phage minor tail protein L 80260 10215625 Rahaq_4510 Rahnella sp. Y9602 phage minor tail protein L YP_004215220.1 78602 R 741091 CDS YP_004215221.1 322835195 10215626 complement(80260..80616) 1 NC_015062.1 PFAM: minor tail family protein; KEGG: pmr:PMI0523 phage minor tail protein; minor tail family protein 80616 10215626 Rahaq_4511 Rahnella sp. Y9602 minor tail family protein YP_004215221.1 80260 R 741091 CDS YP_004215222.1 322835196 10215627 complement(80635..82986) 1 NC_015062.1 KEGG: ecz:ECS88_1205 minor tail protein precursor H; TIGRFAM: phage tail tape measure protein, lambda family; PFAM: Prophage tail length tape measure; phage tail tape measure protein, lambda family 82986 10215627 Rahaq_4512 Rahnella sp. Y9602 phage tail tape measure protein, lambda family YP_004215222.1 80635 R 741091 CDS YP_004215223.1 322835197 10215628 complement(82967..83281) 1 NC_015062.1 KEGG: ebd:ECBD_2861 phage tail assembly protein T; TIGRFAM: phage tail assembly protein T; PFAM: Minor tail T family protein; phage tail assembly protein T 83281 10215628 Rahaq_4513 Rahnella sp. Y9602 phage tail assembly protein T YP_004215223.1 82967 R 741091 CDS YP_004215224.1 322835198 10215629 complement(83302..83718) 1 NC_015062.1 KEGG: enc:ECL_01708 GP14; TIGRFAM: phage minor tail protein G; PFAM: minor tail protein G; phage minor tail protein G 83718 10215629 Rahaq_4514 Rahnella sp. Y9602 phage minor tail protein G YP_004215224.1 83302 R 741091 CDS YP_004215225.1 322835199 10215630 complement(83729..84466) 1 NC_015062.1 KEGG: enc:ECL_01707 GP13; PFAM: Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; Ig domain-containing protein group 2 domain-containing protein 84466 10215630 Rahaq_4515 Rahnella sp. Y9602 Ig domain-containing protein group 2 domain-containing protein YP_004215225.1 83729 R 741091 CDS YP_004215226.1 322835200 10215631 complement(84474..84878) 1 NC_015062.1 PFAM: minor tail U; KEGG: enc:ECL_01706 minor tail protein U; minor tail family protein 84878 10215631 Rahaq_4516 Rahnella sp. Y9602 minor tail family protein YP_004215226.1 84474 R 741091 CDS YP_004215227.1 322835201 10215632 complement(84875..85429) 1 NC_015062.1 PFAM: Prophage minor tail Z family protein; KEGG: enc:ECL_01705 GP11; prophage minor tail Z family protein 85429 10215632 Rahaq_4517 Rahnella sp. Y9602 prophage minor tail Z family protein YP_004215227.1 84875 R 741091 CDS YP_004215228.1 322835202 10215633 complement(85441..85716) 1 NC_015062.1 KEGG: sew:SeSA_A0697 hypothetical protein; hypothetical protein 85716 10215633 Rahaq_4518 Rahnella sp. Y9602 hypothetical protein YP_004215228.1 85441 R 741091 CDS YP_004215229.1 322835203 10215634 complement(85709..86035) 1 NC_015062.1 PFAM: protein of unknown function UCP030771; KEGG: enc:ECL_01703 hypothetical protein; hypothetical protein 86035 10215634 Rahaq_4519 Rahnella sp. Y9602 hypothetical protein YP_004215229.1 85709 R 741091 CDS YP_004215230.1 322835204 10215635 complement(86121..88151) 1 NC_015062.1 PFAM: peptidase S14 ClpP; KEGG: eoi:ECO111_3370 protease/scaffold protein; peptidase S14 ClpP 88151 10215635 Rahaq_4520 Rahnella sp. Y9602 peptidase S14 ClpP YP_004215230.1 86121 R 741091 CDS YP_004215231.1 322835205 10215636 complement(88129..89607) 1 NC_015062.1 KEGG: eck:EC55989_1707 portal protein (head-tail preconnector protein) from prophage; TIGRFAM: phage portal protein, lambda family; PFAM: portal protein lambda; phage portal protein, lambda family 89607 10215636 Rahaq_4521 Rahnella sp. Y9602 phage portal protein, lambda family YP_004215231.1 88129 R 741091 CDS YP_004215232.1 322835206 10215637 complement(89604..89822) 1 NC_015062.1 KEGG: ect:ECIAI39_4880 conserved hypothetical protein from prophage; hypothetical protein 89822 10215637 Rahaq_4522 Rahnella sp. Y9602 hypothetical protein YP_004215232.1 89604 R 741091 CDS YP_004215233.1 322835207 10215638 complement(89819..91921) 1 NC_015062.1 PFAM: terminase GpA; KEGG: eci:UTI89_C5117 DNA packaging protein of prophage CP-933K; terminase GpA 91921 10215638 Rahaq_4523 Rahnella sp. Y9602 terminase GpA YP_004215233.1 89819 R 741091 CDS YP_004215234.1 322835208 10215639 complement(91921..92409) 1 NC_015062.1 PFAM: protein of unknown function DUF1441; KEGG: enc:ECL_01685 hypothetical protein; hypothetical protein 92409 10215639 Rahaq_4524 Rahnella sp. Y9602 hypothetical protein YP_004215234.1 91921 R 741091 CDS YP_004215235.1 322835209 10215640 92841..93134 1 NC_015062.1 KEGG: sdy:SDY_2015 hypothetical protein; hypothetical protein 93134 10215640 Rahaq_4525 Rahnella sp. Y9602 hypothetical protein YP_004215235.1 92841 D 741091 CDS YP_004215236.1 322835210 10215641 complement(93131..93634) 1 NC_015062.1 PFAM: lysis protein; KEGG: xbo:XBJ1_1386 endopeptidase; lysis protein 93634 10215641 Rahaq_4526 Rahnella sp. Y9602 lysis protein YP_004215236.1 93131 R 741091 CDS YP_004215237.1 322835211 10215642 complement(93627..94166) 1 NC_015062.1 KEGG: cko:CKO_01876 hypothetical protein; PFAM: glycoside hydrolase family 24; lysozyme 94166 10215642 Rahaq_4527 Rahnella sp. Y9602 lysozyme YP_004215237.1 93627 R 741091 CDS YP_004215238.1 322835212 10215643 complement(94166..94369) 1 NC_015062.1 PFAM: Lysis S family protein; KEGG: ecd:ECDH10B_1338 lysis S family protein; Lysis S family protein 94369 10215643 Rahaq_4528 Rahnella sp. Y9602 Lysis S family protein YP_004215238.1 94166 R 741091 CDS YP_004215239.1 322835213 10215644 complement(94805..95860) 1 NC_015062.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: xbo:XBJ1_1254 hypothetical protein; DNA methylase N-4/N-6 domain-containing protein 95860 10215644 Rahaq_4529 Rahnella sp. Y9602 DNA methylase N-4/N-6 domain-containing protein YP_004215239.1 94805 R 741091 CDS YP_004215240.1 322835214 10215645 complement(96130..96381) 1 NC_015062.1 KEGG: eic:NT01EI_1431 hypothetical protein; hypothetical protein 96381 10215645 Rahaq_4530 Rahnella sp. Y9602 hypothetical protein YP_004215240.1 96130 R 741091 CDS YP_004215241.1 322835215 10215646 96587..96799 1 NC_015062.1 hypothetical protein 96799 10215646 Rahaq_4531 Rahnella sp. Y9602 hypothetical protein YP_004215241.1 96587 D 741091 CDS YP_004215242.1 322835216 10215647 96908..97249 1 NC_015062.1 KEGG: apt:APA01_23270 hypothetical protein; hypothetical protein 97249 10215647 Rahaq_4532 Rahnella sp. Y9602 hypothetical protein YP_004215242.1 96908 D 741091 CDS YP_004215243.1 322835217 10215649 complement(97969..98790) 1 NC_015062.1 PFAM: antitermination protein; KEGG: kpu:KP1_2171 prophage antitermination protein; antitermination protein 98790 10215649 Rahaq_4534 Rahnella sp. Y9602 antitermination protein YP_004215243.1 97969 R 741091 CDS YP_004215244.1 322835218 10215650 complement(98804..99817) 1 NC_015062.1 SMART: HNH nuclease; KEGG: epy:EpC_20670 conserved uncharacterized protein; HNH nuclease 99817 10215650 Rahaq_4535 Rahnella sp. Y9602 HNH nuclease YP_004215244.1 98804 R 741091 CDS YP_004215245.1 322835219 10215651 complement(99969..100724) 1 NC_015062.1 PFAM: MT-A70 family protein; KEGG: kpe:KPK_4187 adenine-specific DNA methyltransferase; MT-A70 family protein 100724 10215651 Rahaq_4536 Rahnella sp. Y9602 MT-A70 family protein YP_004215245.1 99969 R 741091 CDS YP_004215246.1 322835220 10215652 complement(100721..101569) 1 NC_015062.1 KEGG: eoh:ECO103_5189 hypothetical protein; hypothetical protein 101569 10215652 Rahaq_4537 Rahnella sp. Y9602 hypothetical protein YP_004215246.1 100721 R 741091 CDS YP_004215247.1 322835221 10215653 complement(101566..102588) 1 NC_015062.1 KEGG: cro:ROD_26171 hypothetical protein; hypothetical protein 102588 10215653 Rahaq_4538 Rahnella sp. Y9602 hypothetical protein YP_004215247.1 101566 R 741091 CDS YP_004215248.1 322835222 10215654 complement(102578..102937) 1 NC_015062.1 KEGG: epy:EpC_20730 hypothetical protein; hypothetical protein 102937 10215654 Rahaq_4539 Rahnella sp. Y9602 hypothetical protein YP_004215248.1 102578 R 741091 CDS YP_004215249.1 322835223 10215655 complement(102945..103451) 1 NC_015062.1 KEGG: epy:EpC_20740 hypothetical protein; hypothetical protein 103451 10215655 Rahaq_4540 Rahnella sp. Y9602 hypothetical protein YP_004215249.1 102945 R 741091 CDS YP_004215250.1 322835224 10215656 complement(103493..103732) 1 NC_015062.1 KEGG: enc:ECL_01302 predicted antirepressor protein Cro; antirepressor protein Cro 103732 10215656 Rahaq_4541 Rahnella sp. Y9602 antirepressor protein Cro YP_004215250.1 103493 R 741091 CDS YP_004215251.1 322835225 10215657 103850..104560 1 NC_015062.1 KEGG: efe:EFER_2722 regulatory protein CI from bacteriophage origin; PFAM: Peptidase S24/S26A/S26B, conserved region; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; phage repressor 104560 10215657 Rahaq_4542 Rahnella sp. Y9602 phage repressor YP_004215251.1 103850 D 741091 CDS YP_004215252.1 322835226 10215658 104664..104906 1 NC_015062.1 KEGG: nhl:Nhal_1914 HicA protein; HicA protein 104906 10215658 Rahaq_4543 Rahnella sp. Y9602 HicA protein YP_004215252.1 104664 D 741091 CDS YP_004215253.1 322835227 10215659 104910..105368 1 NC_015062.1 KEGG: nhl:Nhal_1915 HicB family protein; HicB family protein 105368 10215659 Rahaq_4544 Rahnella sp. Y9602 HicB family protein YP_004215253.1 104910 D 741091 CDS YP_004215254.1 322835228 10215660 105368..105763 1 NC_015062.1 KEGG: npu:Npun_F3172 beta-ketoacyl synthase; hypothetical protein 105763 10215660 Rahaq_4545 Rahnella sp. Y9602 hypothetical protein YP_004215254.1 105368 D 741091 CDS YP_004215255.1 322835229 10215661 106275..106484 1 NC_015062.1 KEGG: ecd:ECDH10B_1325 hypothetical protein; hypothetical protein 106484 10215661 Rahaq_4546 Rahnella sp. Y9602 hypothetical protein YP_004215255.1 106275 D 741091 CDS YP_004215256.1 322835230 10215662 106515..106673 1 NC_015062.1 hypothetical protein 106673 10215662 Rahaq_4547 Rahnella sp. Y9602 hypothetical protein YP_004215256.1 106515 D 741091 CDS YP_004215257.1 322835231 10215663 107490..107981 1 NC_015062.1 KEGG: epy:EpC_20820 hypothetical protein; hypothetical protein 107981 10215663 Rahaq_4548 Rahnella sp. Y9602 hypothetical protein YP_004215257.1 107490 D 741091 CDS YP_004215258.1 322835232 10215664 107983..108279 1 NC_015062.1 KEGG: sgl:SG1561 hypothetical protein; hypothetical protein 108279 10215664 Rahaq_4549 Rahnella sp. Y9602 hypothetical protein YP_004215258.1 107983 D 741091 CDS YP_004215259.1 322835233 10215665 108479..108721 1 NC_015062.1 PFAM: excisionase; KEGG: ecz:ECS88_1328 phage excisionase; excisionase 108721 10215665 Rahaq_4550 Rahnella sp. Y9602 excisionase YP_004215259.1 108479 D 741091 CDS YP_004215260.1 322835234 10215666 108705..109829 1 NC_015062.1 PFAM: lambda integrase ; integrase family protein; KEGG: sgl:SG1699 phage integrase; lambda integrase 109829 10215666 Rahaq_4551 Rahnella sp. Y9602 lambda integrase YP_004215260.1 108705 D 741091 CDS YP_004215261.1 322835235 10215667 complement(109904..110575) 1 NC_015062.1 PFAM: porin Gram-negative type; KEGG: ecz:ECS88_1492 outer membrane pore protein N, non-specific; porin 110575 10215667 Rahaq_4552 Rahnella sp. Y9602 porin YP_004215261.1 109904 R 741091 CDS YP_004215262.1 322835236 10215668 complement(111185..111373) 1 NC_015062.1 KEGG: kva:Kvar_4083 hypothetical protein; hypothetical protein 111373 10215668 Rahaq_4553 Rahnella sp. Y9602 hypothetical protein YP_004215262.1 111185 R 741091 CDS YP_004215263.1 322835237 10215670 112175..112954 1 NC_015062.1 KEGG: dze:Dd1591_0974 acetoin reductase; TIGRFAM: acetoin reductase; PFAM: short-chain dehydrogenase/reductase SDR; acetoin reductase 112954 10215670 Rahaq_4555 Rahnella sp. Y9602 acetoin reductase YP_004215263.1 112175 D 741091 CDS YP_004215264.1 322835238 10215671 complement(113019..113885) 1 NC_015062.1 KEGG: pam:PANA_0651 Rob; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 113885 10215671 Rahaq_4556 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004215264.1 113019 R 741091 CDS YP_004215265.1 322835239 10215672 complement(114306..115874) 1 NC_015062.1 PFAM: Tannase and feruloyl esterase; KEGG: ara:Arad_2086 tannase and feruloyl esterase; tannase and feruloyl esterase 115874 10215672 Rahaq_4557 Rahnella sp. Y9602 tannase and feruloyl esterase YP_004215265.1 114306 R 741091 CDS YP_004215266.1 322835240 10215673 116242..116409 1 NC_015062.1 KEGG: pmr:PMI3460 lipoprotein; lipoprotein 116409 10215673 Rahaq_4558 Rahnella sp. Y9602 lipoprotein YP_004215266.1 116242 D 741091 CDS YP_004215267.1 322835241 10215674 complement(116707..118848) 1 NC_015062.1 PFAM: protein of unknown function DUF323; Methyltransferase type 11; KEGG: ebi:EbC_00030 conserved uncharacterized protein; hypothetical protein 118848 10215674 Rahaq_4559 Rahnella sp. Y9602 hypothetical protein YP_004215267.1 116707 R 741091 CDS YP_004215268.1 322835242 10215675 complement(118995..120119) 1 NC_015062.1 PFAM: integrase family protein; KEGG: pam:PANA_4235 IntA; integrase family protein 120119 10215675 Rahaq_4560 Rahnella sp. Y9602 integrase family protein YP_004215268.1 118995 R 741091 CDS YP_004215269.1 322835243 10215676 120526..122073 1 NC_015062.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: pam:PANA_0296 Aer; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 122073 10215676 Rahaq_4561 Rahnella sp. Y9602 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor YP_004215269.1 120526 D 741091 CDS YP_004215270.1 322835244 10215677 complement(122146..123693) 1 NC_015062.1 KEGG: ebi:EbC_17630 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 123693 10215677 Rahaq_4562 Rahnella sp. Y9602 methyl-accepting chemotaxis sensory transducer YP_004215270.1 122146 R 741091 CDS YP_004215271.1 322835245 10215678 124539..125033 1 NC_015062.1 KEGG: spe:Spro_1783 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: Uncharacterised conserved protein UCP028301; type VI secretion protein 125033 10215678 Rahaq_4563 Rahnella sp. Y9602 type VI secretion protein YP_004215271.1 124539 D 741091 CDS YP_004215272.1 322835246 10215679 125071..126612 1 NC_015062.1 KEGG: spe:Spro_1784 hypothetical protein; TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; type VI secretion protein EvpB 126612 10215679 Rahaq_4564 Rahnella sp. Y9602 type VI secretion protein EvpB YP_004215272.1 125071 D 741091 CDS YP_004215273.1 322835247 10215680 126628..127977 1 NC_015062.1 KEGG: pay:PAU_03059 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; type VI secretion protein 127977 10215680 Rahaq_4565 Rahnella sp. Y9602 type VI secretion protein YP_004215273.1 126628 D 741091 CDS YP_004215274.1 322835248 10215681 127974..128648 1 NC_015062.1 KEGG: ctu:Ctu_19310 hypothetical protein; TIGRFAM: type IV / VI secretion system protein, DotU family; PFAM: type IV / VI secretion system, DotU; DotU family type IV / VI secretion system protein 128648 10215681 Rahaq_4566 Rahnella sp. Y9602 DotU family type IV / VI secretion system protein YP_004215274.1 127974 D 741091 CDS YP_004215275.1 322835249 10215682 128650..130326 1 NC_015062.1 PFAM: OmpA/MotB domain protein; KEGG: eay:EAM_0371 outer membrane protein; OmpA/MotB domain-containing protein 130326 10215682 Rahaq_4567 Rahnella sp. Y9602 OmpA/MotB domain-containing protein YP_004215275.1 128650 D 741091 CDS YP_004215276.1 322835250 10215683 130359..130850 1 NC_015062.1 KEGG: ctu:Ctu_19330 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; type VI secretion system effector 130850 10215683 Rahaq_4568 Rahnella sp. Y9602 type VI secretion system effector YP_004215276.1 130359 D 741091 CDS YP_004215277.1 322835251 10215684 130947..133667 1 NC_015062.1 TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: eay:EAM_0373 ATPase/chaperone; SMART: AAA ATPase; type VI secretion ATPase, ClpV1 family 133667 10215684 Rahaq_4569 Rahnella sp. Y9602 type VI secretion ATPase, ClpV1 family YP_004215277.1 130947 D 741091 CDS YP_004215278.1 322835252 10215685 133664..136006 1 NC_015062.1 KEGG: ses:SARI_02626 hypothetical protein; TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; PFAM: Protein of unknown function DUF2345; Rhs element Vgr protein 136006 10215685 Rahaq_4570 Rahnella sp. Y9602 Rhs element Vgr protein YP_004215278.1 133664 D 741091 CDS YP_004215279.1 322835253 10215686 136121..136636 1 NC_015062.1 KEGG: ebi:EbC_03460 conserved uncharacterized protein; hypothetical protein 136636 10215686 Rahaq_4571 Rahnella sp. Y9602 hypothetical protein YP_004215279.1 136121 D 741091 CDS YP_004215280.1 322835254 10215687 136653..140141 1 NC_015062.1 KEGG: ctu:Ctu_19400 hypothetical protein; hypothetical protein 140141 10215687 Rahaq_4572 Rahnella sp. Y9602 hypothetical protein YP_004215280.1 136653 D 741091 CDS YP_004215281.1 322835255 10215688 140157..140714 1 NC_015062.1 KEGG: dac:Daci_0205 hypothetical protein; hypothetical protein 140714 10215688 Rahaq_4573 Rahnella sp. Y9602 hypothetical protein YP_004215281.1 140157 D 741091 CDS YP_004215282.1 322835256 10215689 140730..141179 1 NC_015062.1 KEGG: sec:SC2148 hypothetical protein; hypothetical protein 141179 10215689 Rahaq_4574 Rahnella sp. Y9602 hypothetical protein YP_004215282.1 140730 D 741091 CDS YP_004215283.1 322835257 10215690 141207..141737 1 NC_015062.1 KEGG: sew:SeSA_A3723 hypothetical protein; hypothetical protein 141737 10215690 Rahaq_4575 Rahnella sp. Y9602 hypothetical protein YP_004215283.1 141207 D 741091 CDS YP_004215284.1 322835258 10215691 141799..142062 1 NC_015062.1 KEGG: ses:SARI_02623 hypothetical protein; hypothetical protein 142062 10215691 Rahaq_4576 Rahnella sp. Y9602 hypothetical protein YP_004215284.1 141799 D 741091 CDS YP_004215285.1 322835259 10215692 142065..143276 1 NC_015062.1 KEGG: ses:SARI_02614 hypothetical protein; hypothetical protein 143276 10215692 Rahaq_4577 Rahnella sp. Y9602 hypothetical protein YP_004215285.1 142065 D 741091 CDS YP_004215286.1 322835260 10215693 143273..146689 1 NC_015062.1 PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: ses:SARI_02612 hypothetical protein; ImcF domain-containing protein 146689 10215693 Rahaq_4578 Rahnella sp. Y9602 ImcF domain-containing protein YP_004215286.1 143273 D 741091 CDS YP_004215287.1 322835261 10215694 146789..148558 1 NC_015062.1 KEGG: ses:SARI_02606 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; type VI secretion protein 148558 10215694 Rahaq_4579 Rahnella sp. Y9602 type VI secretion protein YP_004215287.1 146789 D 741091 CDS YP_004215288.1 322835262 10215695 148522..149604 1 NC_015062.1 KEGG: eay:EAM_0382 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; type VI secretion protein 149604 10215695 Rahaq_4580 Rahnella sp. Y9602 type VI secretion protein YP_004215288.1 148522 D 741091 CDS YP_004215289.1 322835263 10215696 149668..150210 1 NC_015062.1 TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: ses:SARI_02604 hypothetical protein; type VI secretion lipoprotein 150210 10215696 Rahaq_4581 Rahnella sp. Y9602 type VI secretion lipoprotein YP_004215289.1 149668 D 741091 CDS YP_004215290.1 322835264 10215697 150223..152745 1 NC_015062.1 KEGG: ses:SARI_00371 hypothetical protein; TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; PFAM: Protein of unknown function DUF2345; Rhs element Vgr protein 152745 10215697 Rahaq_4582 Rahnella sp. Y9602 Rhs element Vgr protein YP_004215290.1 150223 D 741091 CDS YP_004215291.1 322835265 10215698 152761..154215 1 NC_015062.1 KEGG: kpn:KPN_03171 hypothetical protein; hypothetical protein 154215 10215698 Rahaq_4583 Rahnella sp. Y9602 hypothetical protein YP_004215291.1 152761 D 741091 CDS YP_004215292.1 322835266 10215699 154215..155267 1 NC_015062.1 KEGG: ent:Ent638_2910 ImpA domain-containing protein; ImpA domain-containing protein 155267 10215699 Rahaq_4584 Rahnella sp. Y9602 ImpA domain-containing protein YP_004215292.1 154215 D 741091 CDS YP_004215293.1 322835267 10215700 155355..156404 1 NC_015062.1 KEGG: ent:Ent638_2910 ImpA domain-containing protein; ImpA domain-containing protein 156404 10215700 Rahaq_4585 Rahnella sp. Y9602 ImpA domain-containing protein YP_004215293.1 155355 D 741091 CDS YP_004215294.1 322835268 10215701 156494..157333 1 NC_015062.1 KEGG: ent:Ent638_2907 hypothetical protein; hypothetical protein 157333 10215701 Rahaq_4586 Rahnella sp. Y9602 hypothetical protein YP_004215294.1 156494 D 741091 CDS YP_004215295.1 322835269 10215702 157534..159138 1 NC_015062.1 KEGG: ypz:YPZ3_1350 hypothetical protein; TIGRFAM: type VI secretion-associated protein, VC_A0119 family; PFAM: ImpA domain protein; type VI secretion-associated protein 159138 10215702 Rahaq_4587 Rahnella sp. Y9602 type VI secretion-associated protein YP_004215295.1 157534 D 741091 CDS YP_004215296.1 322835270 10215703 159158..159589 1 NC_015062.1 KEGG: ypb:YPTS_1613 type VI secretion system lysozyme-related protein; TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; type VI secretion system lysozyme-like protein 159589 10215703 Rahaq_4588 Rahnella sp. Y9602 type VI secretion system lysozyme-like protein YP_004215296.1 159158 D 741091 CDS YP_004215297.1 322835271 10215704 complement(159534..159659) 1 NC_015062.1 hypothetical protein 159659 10215704 Rahaq_4589 Rahnella sp. Y9602 hypothetical protein YP_004215297.1 159534 R 741091 CDS YP_004215298.1 322835272 10215705 159751..160560 1 NC_015062.1 KEGG: sei:SPC_0512 probable secreted protein; secreted protein 160560 10215705 Rahaq_4590 Rahnella sp. Y9602 secreted protein YP_004215298.1 159751 D 741091 CDS YP_004215299.1 322835273 10215706 160643..162037 1 NC_015062.1 PFAM: ImpA domain protein; KEGG: ebi:EbC_04230 ImpA domain protein; ImpA domain-containing protein 162037 10215706 Rahaq_4591 Rahnella sp. Y9602 ImpA domain-containing protein YP_004215299.1 160643 D 741091 CDS YP_004215300.1 322835274 10215707 162087..162557 1 NC_015062.1 KEGG: kpu:KP1_2422 hypothetical protein; hypothetical protein 162557 10215707 Rahaq_4592 Rahnella sp. Y9602 hypothetical protein YP_004215300.1 162087 D 741091 CDS YP_004215301.1 322835275 10215708 163105..164529 1 NC_015062.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: yen:YE2471 cytochrome oxidase subunit; cytochrome bd ubiquinol oxidase subunit I 164529 10215708 Rahaq_4593 Rahnella sp. Y9602 cytochrome bd ubiquinol oxidase subunit I YP_004215301.1 163105 D 741091 CDS YP_004215302.1 322835276 10215709 164532..165539 1 NC_015062.1 KEGG: pfl:PFL_5363 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase, subunit II 165539 10215709 Rahaq_4594 Rahnella sp. Y9602 cytochrome d ubiquinol oxidase, subunit II YP_004215302.1 164532 D 741091 CDS YP_004215303.1 322835277 10215710 165551..165715 1 NC_015062.1 PFAM: Protein of unknown function DUF2474; KEGG: spe:Spro_2861 hypothetical protein; hypothetical protein 165715 10215710 Rahaq_4595 Rahnella sp. Y9602 hypothetical protein YP_004215303.1 165551 D 741091 CDS YP_004215304.1 322835278 10215711 complement(165949..166527) 1 NC_015062.1 PFAM: regulatory protein TetR; KEGG: pct:PC1_0829 transcriptional regulator, TetR family; TetR family transcriptional regulator 166527 10215711 Rahaq_4596 Rahnella sp. Y9602 TetR family transcriptional regulator YP_004215304.1 165949 R 741091 CDS YP_004215305.1 322835279 10215712 complement(166575..168071) 1 NC_015062.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2687 major facilitator transporter; major facilitator superfamily protein 168071 10215712 Rahaq_4597 Rahnella sp. Y9602 major facilitator superfamily protein YP_004215305.1 166575 R 741091 CDS YP_004215306.1 322835280 10215713 complement(168300..169814) 1 NC_015062.1 PFAM: extracellular solute-binding protein family 5; KEGG: ddc:Dd586_2914 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein 169814 10215713 Rahaq_4598 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004215306.1 168300 R 741091 CDS YP_004215307.1 322835281 10215714 complement(169795..170844) 1 NC_015062.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ddc:Dd586_2915 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 170844 10215714 Rahaq_4599 Rahnella sp. Y9602 oligopeptide/dipeptide ABC transporter ATPase YP_004215307.1 169795 R 741091 CDS YP_004215308.1 322835282 10215715 complement(170828..171805) 1 NC_015062.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ddc:Dd586_2916 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 171805 10215715 Rahaq_4600 Rahnella sp. Y9602 oligopeptide/dipeptide ABC transporter ATPase YP_004215308.1 170828 R 741091 CDS YP_004215309.1 322835283 10215716 complement(171802..172662) 1 NC_015062.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddd:Dda3937_00838 ABC transporter permease; binding-protein-dependent transport system inner membrane protein 172662 10215716 Rahaq_4601 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004215309.1 171802 R 741091 CDS YP_004215310.1 322835284 10215717 complement(172659..173597) 1 NC_015062.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddc:Dd586_2918 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 173597 10215717 Rahaq_4602 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004215310.1 172659 R 741091 CDS YP_004215311.1 322835285 10215718 173825..174580 1 NC_015062.1 KEGG: ddc:Dd586_2919 transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; SMART: regulatory protein LuxR; LuxR family transcriptional regulator 174580 10215718 Rahaq_4603 Rahnella sp. Y9602 LuxR family transcriptional regulator YP_004215311.1 173825 D 741091 CDS YP_004215312.1 322835286 10215719 174670..175569 1 NC_015062.1 TIGRFAM: proline-specific peptidase; KEGG: ddd:Dda3937_00843 peptidase S33, tricorn interacting factor 1; PFAM: alpha/beta hydrolase fold; proline-specific peptidase 175569 10215719 Rahaq_4604 Rahnella sp. Y9602 proline-specific peptidase YP_004215312.1 174670 D 741091 CDS YP_004215313.1 322835287 10215720 complement(175648..176634) 1 NC_015062.1 KEGG: ebi:EbC_pEb17201610 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 176634 10215720 Rahaq_4605 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004215313.1 175648 R 741091 CDS YP_004215314.1 322835288 10215721 176695..177933 1 NC_015062.1 PFAM: major facilitator superfamily MFS_1; KEGG: ent:Ent638_1531 major facilitator transporter; major facilitator superfamily protein 177933 10215721 Rahaq_4606 Rahnella sp. Y9602 major facilitator superfamily protein YP_004215314.1 176695 D 741091 CDS YP_004215315.1 322835289 10215722 178467..179900 1 NC_015062.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: pam:PANA_3246 CydA; cytochrome bd ubiquinol oxidase subunit I 179900 10215722 Rahaq_4607 Rahnella sp. Y9602 cytochrome bd ubiquinol oxidase subunit I YP_004215315.1 178467 D 741091 CDS YP_004215316.1 322835290 10215723 179893..180897 1 NC_015062.1 KEGG: pam:PANA_3245 CydB; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase, subunit II 180897 10215723 Rahaq_4608 Rahnella sp. Y9602 cytochrome d ubiquinol oxidase, subunit II YP_004215316.1 179893 D 741091 CDS YP_004215317.1 322835291 10215724 180956..181105 1 NC_015062.1 PFAM: Protein of unknown function DUF2474; KEGG: pam:PANA_3244 hypothetical protein; hypothetical protein 181105 10215724 Rahaq_4609 Rahnella sp. Y9602 hypothetical protein YP_004215317.1 180956 D 741091 CDS YP_004215318.1 322835292 10215725 complement(181135..181896) 1 NC_015062.1 KEGG: ebi:EbC_35010 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 181896 10215725 Rahaq_4610 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004215318.1 181135 R 741091 CDS YP_004215319.1 322835293 10215726 182119..182859 1 NC_015062.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebi:EbC_35000 oxidoreductase; short-chain dehydrogenase/reductase SDR 182859 10215726 Rahaq_4611 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004215319.1 182119 D 741091 CDS YP_004215320.1 322835294 10215727 182923..183765 1 NC_015062.1 KEGG: ypy:YPK_2509 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; PFAM: fumarylacetoacetate (FAA) hydrolase; ureidoglycolate lyase 183765 10215727 Rahaq_4612 Rahnella sp. Y9602 ureidoglycolate lyase YP_004215320.1 182923 D 741091 CDS YP_004215321.1 322835295 10215728 183792..185069 1 NC_015062.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ebi:EbC_34980 mandelate racemase/muconate lactonizing protein; mandelate racemase/muconate lactonizing protein 185069 10215728 Rahaq_4613 Rahnella sp. Y9602 mandelate racemase/muconate lactonizing protein YP_004215321.1 183792 D 741091 CDS YP_004215322.1 322835296 10215729 185104..185958 1 NC_015062.1 PFAM: amidohydrolase 2; KEGG: ebi:EbC_34970 amidohydrolase 2; amidohydrolase 2 185958 10215729 Rahaq_4614 Rahnella sp. Y9602 amidohydrolase 2 YP_004215322.1 185104 D 741091 CDS YP_004215323.1 322835297 10215730 185958..186734 1 NC_015062.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebi:EbC_34960 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 186734 10215730 Rahaq_4615 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004215323.1 185958 D 741091 CDS YP_004215324.1 322835298 10215731 186731..187075 1 NC_015062.1 PFAM: protein of unknown function DUF718; KEGG: ebi:EbC_34950 conserved uncharacterized protein; hypothetical protein 187075 10215731 Rahaq_4616 Rahnella sp. Y9602 hypothetical protein YP_004215324.1 186731 D 741091 CDS YP_004215325.1 322835299 10215732 187188..188426 1 NC_015062.1 KEGG: ebi:EbC_34940 L-fucose transporter; TIGRFAM: L-fucose transporter; PFAM: major facilitator superfamily MFS_1; L-fucose transporter 188426 10215732 Rahaq_4617 Rahnella sp. Y9602 L-fucose transporter YP_004215325.1 187188 D 741091 CDS YP_004215326.1 322835300 10215733 188624..189829 1 NC_015062.1 PFAM: major facilitator superfamily MFS_1; KEGG: enc:ECL_02166 major facilitator transporter; major facilitator superfamily protein 189829 10215733 Rahaq_4618 Rahnella sp. Y9602 major facilitator superfamily protein YP_004215326.1 188624 D 741091 CDS YP_004215327.1 322835301 10215734 complement(189877..190587) 1 NC_015062.1 KEGG: kva:Kvar_3220 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; ArsR family transcriptional regulator 190587 10215734 Rahaq_4619 Rahnella sp. Y9602 ArsR family transcriptional regulator YP_004215327.1 189877 R 741091 CDS YP_004215328.1 322835302 10215735 complement(190584..190976) 1 NC_015062.1 KEGG: kva:Kvar_3219 amino acid-binding ACT domain protein; amino acid-binding ACT protein 190976 10215735 Rahaq_4620 Rahnella sp. Y9602 amino acid-binding ACT protein YP_004215328.1 190584 R 741091 CDS YP_004215329.1 322835303 10215736 complement(190969..191304) 1 NC_015062.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: kva:Kvar_3218 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 191304 10215736 Rahaq_4621 Rahnella sp. Y9602 antibiotic biosynthesis monooxygenase YP_004215329.1 190969 R 741091 CDS YP_004215330.1 322835304 10215737 191569..192552 1 NC_015062.1 PFAM: hypothetical protein; KEGG: pam:PANA_1614 hypothetical protein; hypothetical protein 192552 10215737 Rahaq_4622 Rahnella sp. Y9602 hypothetical protein YP_004215330.1 191569 D 741091 CDS YP_004215331.1 322835305 10215738 192584..193615 1 NC_015062.1 PFAM: Methionine synthase vitamin-B12 independent; KEGG: rme:Rmet_5073 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; methionine synthase 193615 10215738 Rahaq_4623 Rahnella sp. Y9602 methionine synthase YP_004215331.1 192584 D 741091 CDS YP_004215332.1 322835306 10215739 complement(193813..194373) 1 NC_015062.1 PFAM: YceI family protein; KEGG: ddd:Dda3937_02951 hypothetical protein; hypothetical protein 194373 10215739 Rahaq_4624 Rahnella sp. Y9602 hypothetical protein YP_004215332.1 193813 R 741091 CDS YP_004215333.1 322835307 10215740 complement(194443..195573) 1 NC_015062.1 KEGG: aar:Acear_0937 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 195573 10215740 Rahaq_4625 Rahnella sp. Y9602 metal dependent phosphohydrolase YP_004215333.1 194443 R 741091 CDS YP_004215334.1 322835308 10215741 195848..196630 1 NC_015062.1 PFAM: transcriptional regulator domain-containing protein; KEGG: ebi:EbC_17800 response regulator; transcriptional regulator domain-containing protein 196630 10215741 Rahaq_4626 Rahnella sp. Y9602 transcriptional regulator domain-containing protein YP_004215334.1 195848 D 741091 CDS YP_004215335.1 322835309 10215742 196627..197118 1 NC_015062.1 KEGG: ebi:EbC_17810 hypothetical protein; hypothetical protein 197118 10215742 Rahaq_4627 Rahnella sp. Y9602 hypothetical protein YP_004215335.1 196627 D 741091 CDS YP_004215336.1 322835310 10215743 197318..197884 1 NC_015062.1 PFAM: YfaZ family protein; KEGG: ent:Ent638_3392 YfaZ family protein; hypothetical protein 197884 10215743 Rahaq_4628 Rahnella sp. Y9602 hypothetical protein YP_004215336.1 197318 D 741091 CDS YP_004215337.1 322835311 10215744 complement(197977..198705) 1 NC_015062.1 TIGRFAM: peptide methionine sulfoxide reductase; KEGG: bph:Bphy_5423 peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase 198705 10215744 Rahaq_4629 Rahnella sp. Y9602 peptide methionine sulfoxide reductase YP_004215337.1 197977 R 741091 CDS YP_004215338.1 322835312 10215745 complement(198724..199230) 1 NC_015062.1 TIGRFAM: methionine-R-sulfoxide reductase; KEGG: bcj:BCAS0724 peptide methionine sulfoxide reductase family protein; PFAM: Methionine sulfoxide reductase B; Twin-arginine translocation pathway, signal sequence, subgroup; methionine-R-sulfoxide reductase 199230 10215745 Rahaq_4630 Rahnella sp. Y9602 methionine-R-sulfoxide reductase YP_004215338.1 198724 R 741091 CDS YP_004215339.1 322835313 10215746 complement(199471..201510) 1 NC_015062.1 PFAM: glycoside hydrolase family 31; KEGG: ebi:EbC_00520 glycoside hydrolase, family 31; glycoside hydrolase family protein 201510 10215746 Rahaq_4631 Rahnella sp. Y9602 glycoside hydrolase family protein YP_004215339.1 199471 R 741091 CDS YP_004215340.1 322835314 10215747 complement(201507..202886) 1 NC_015062.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: ebi:EbC_00510 conserved uncharacterized protein; sugar (Glycoside-Pentoside-Hexuronide) transporter 202886 10215747 Rahaq_4632 Rahnella sp. Y9602 sugar (Glycoside-Pentoside-Hexuronide) transporter YP_004215340.1 201507 R 741091 CDS YP_004215341.1 322835315 10215749 203362..203781 1 NC_015062.1 KEGG: enc:ECL_04084 transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator 203781 10215749 Rahaq_4634 Rahnella sp. Y9602 MarR family transcriptional regulator YP_004215341.1 203362 D 741091 CDS YP_004215342.1 322835316 10215750 203988..204470 1 NC_015062.1 KEGG: enc:ECL_01377 Hcp family type VI secretion system effector; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; type VI secretion system effector 204470 10215750 Rahaq_4635 Rahnella sp. Y9602 type VI secretion system effector YP_004215342.1 203988 D 741091 CDS YP_004215343.1 322835317 10215751 204467..204943 1 NC_015062.1 KEGG: ctu:Ctu_22470 hypothetical protein; hypothetical protein 204943 10215751 Rahaq_4636 Rahnella sp. Y9602 hypothetical protein YP_004215343.1 204467 D 741091 CDS YP_004215344.1 322835318 10215752 204943..205185 1 NC_015062.1 KEGG: ctp:CTRG_04817 similar to potential GABA-specific transport protein; hypothetical protein 205185 10215752 Rahaq_4637 Rahnella sp. Y9602 hypothetical protein YP_004215344.1 204943 D 741091 CDS YP_004215345.1 322835319 10215753 205525..206058 1 NC_015062.1 TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; KEGG: set:SEN2882 isopentenyl-diphosphate delta-isomerase; PFAM: NUDIX hydrolase; isopentenyl-diphosphate delta-isomerase 206058 10215753 Rahaq_4638 Rahnella sp. Y9602 isopentenyl-diphosphate delta-isomerase YP_004215345.1 205525 D 741091 CDS YP_004215346.1 322835320 10215754 complement(206011..206604) 1 NC_015062.1 PFAM: shikimate kinase; KEGG: kpe:KPK_2450 hypothetical protein; shikimate kinase 206604 10215754 Rahaq_4639 Rahnella sp. Y9602 shikimate kinase YP_004215346.1 206011 R 741091 CDS YP_004215347.1 322835321 10215755 207053..207310 1 NC_015062.1 KEGG: pwa:Pecwa_2840 hypothetical protein; hypothetical protein 207310 10215755 Rahaq_4640 Rahnella sp. Y9602 hypothetical protein YP_004215347.1 207053 D 741091 CDS YP_004215348.1 322835322 10215756 complement(207370..208227) 1 NC_015062.1 PFAM: Male sterility domain; KEGG: yen:YE1738 hypothetical protein; hypothetical protein 208227 10215756 Rahaq_4641 Rahnella sp. Y9602 hypothetical protein YP_004215348.1 207370 R 741091 CDS YP_004215349.1 322835323 10215757 208348..208764 1 NC_015062.1 PFAM: helix-turn-helix HxlR type; KEGG: ypb:YPTS_2505 HxlR family transcriptional regulator; HxlR family transcriptional regulator 208764 10215757 Rahaq_4642 Rahnella sp. Y9602 HxlR family transcriptional regulator YP_004215349.1 208348 D 741091 CDS YP_004215350.1 322835324 10215758 208883..209449 1 NC_015062.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: kva:Kvar_4034 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 209449 10215758 Rahaq_4643 Rahnella sp. Y9602 antibiotic biosynthesis monooxygenase YP_004215350.1 208883 D 741091 CDS YP_004215351.1 322835325 10215759 209464..211344 1 NC_015062.1 PFAM: Amidohydrolase 3; KEGG: ebi:EbC_06450 amidohydrolase; amidohydrolase 211344 10215759 Rahaq_4644 Rahnella sp. Y9602 amidohydrolase YP_004215351.1 209464 D 741091 CDS YP_004215352.1 322835326 10215760 211466..212371 1 NC_015062.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ent:Ent638_2291 LysR family transcriptional regulator; LysR family transcriptional regulator 212371 10215760 Rahaq_4645 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004215352.1 211466 D 741091 CDS YP_004215353.1 322835327 10215761 212447..213274 1 NC_015062.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ent:Ent638_2290 hypothetical protein; hypothetical protein 213274 10215761 Rahaq_4646 Rahnella sp. Y9602 hypothetical protein YP_004215353.1 212447 D 741091 CDS YP_004215354.1 322835328 10215762 213295..214185 1 NC_015062.1 KEGG: ddd:Dda3937_04144 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase 214185 10215762 Rahaq_4647 Rahnella sp. Y9602 2-dehydropantoate 2-reductase YP_004215354.1 213295 D 741091 CDS YP_004215355.1 322835329 10215763 complement(214244..215002) 1 NC_015062.1 PFAM: YdjC family protein; KEGG: ent:Ent638_1711 hypothetical protein; hypothetical protein 215002 10215763 Rahaq_4648 Rahnella sp. Y9602 hypothetical protein YP_004215355.1 214244 R 741091 CDS YP_004215356.1 322835330 10215764 complement(215049..216392) 1 NC_015062.1 PFAM: glycoside hydrolase family 4; KEGG: cko:CKO_01759 hypothetical protein; glycoside hydrolase family protein 216392 10215764 Rahaq_4649 Rahnella sp. Y9602 glycoside hydrolase family protein YP_004215356.1 215049 R 741091 CDS YP_004215357.1 322835331 10215765 complement(216453..217289) 1 NC_015062.1 KEGG: ebd:ECBD_1910 DNA-binding transcriptional regulator ChbR; PFAM: helix-turn-helix- domain containing protein AraC type; cupin; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 217289 10215765 Rahaq_4650 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004215357.1 216453 R 741091 CDS YP_004215358.1 322835332 10215766 complement(217304..217651) 1 NC_015062.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: cro:ROD_13201 N,N'-diacetylchitobiose-specific PTS system, EIIA component; phosphotransferase system PTS lactose/cellobiose-specific IIA subunit 217651 10215766 Rahaq_4651 Rahnella sp. Y9602 phosphotransferase system PTS lactose/cellobiose-specific IIA subunit YP_004215358.1 217304 R 741091 CDS YP_004215359.1 322835333 10215767 complement(217717..219075) 1 NC_015062.1 TIGRFAM: PTS system, cellobiose-specific IIC subunit; PTS system, lactose/cellobiose family IIC subunit; KEGG: kva:Kvar_3083 PTS system, cellobiose-specific IIC subunit; PFAM: phosphotransferase system EIIC; PTS system cellobiose-specific transporter subunit IIC 219075 10215767 Rahaq_4652 Rahnella sp. Y9602 PTS system cellobiose-specific transporter subunit IIC YP_004215359.1 217717 R 741091 CDS YP_004215360.1 322835334 10215768 complement(219203..219523) 1 NC_015062.1 KEGG: set:SEN1731 PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB; TIGRFAM: PTS system, lactose/cellobiose family IIB subunit; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; PTS system lactose/cellobiose family transporter subunit IIB 219523 10215768 Rahaq_4653 Rahnella sp. Y9602 PTS system lactose/cellobiose family transporter subunit IIB YP_004215360.1 219203 R 741091 CDS YP_004215361.1 322835335 10215769 219871..220905 1 NC_015062.1 KEGG: pct:PC1_0916 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator 220905 10215769 Rahaq_4654 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004215361.1 219871 D 741091 CDS YP_004215362.1 322835336 10215770 221395..222120 1 NC_015062.1 KEGG: ebi:EbC_11980 hypothetical protein; gluconate 2-dehydrogenase (acceptor) 222120 10215770 Rahaq_4655 Rahnella sp. Y9602 gluconate 2-dehydrogenase (acceptor) YP_004215362.1 221395 D 741091 CDS YP_004215363.1 322835337 10215771 222166..223935 1 NC_015062.1 KEGG: ebi:EbC_11990 gluconate 2-dehydrogenase (acceptor); gluconate 2-dehydrogenase (acceptor) 223935 10215771 Rahaq_4656 Rahnella sp. Y9602 gluconate 2-dehydrogenase (acceptor) YP_004215363.1 222166 D 741091 CDS YP_004215364.1 322835338 10215772 223951..225222 1 NC_015062.1 KEGG: ebi:EbC_12000 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I; gluconate 2-dehydrogenase (acceptor) 225222 10215772 Rahaq_4657 Rahnella sp. Y9602 gluconate 2-dehydrogenase (acceptor) YP_004215364.1 223951 D 741091 CDS YP_004215365.1 322835339 10215773 complement(225279..225668) 1 NC_015062.1 KEGG: ent:Ent638_1088 cytoplasmic protein; hypothetical protein 225668 10215773 Rahaq_4658 Rahnella sp. Y9602 hypothetical protein YP_004215365.1 225279 R 741091 CDS YP_004215366.1 322835340 10215774 complement(225665..227053) 1 NC_015062.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3715 major facilitator transporter; major facilitator superfamily protein 227053 10215774 Rahaq_4659 Rahnella sp. Y9602 major facilitator superfamily protein YP_004215366.1 225665 R 741091 CDS YP_004215367.1 322835341 10215775 227168..228082 1 NC_015062.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_3714 LysR family transcriptional regulator; LysR family transcriptional regulator 228082 10215775 Rahaq_4660 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004215367.1 227168 D 741091 CDS YP_004215368.1 322835342 10215776 228110..228652 1 NC_015062.1 PFAM: GCN5-related N-acetyltransferase; KEGG: kva:Kvar_2751 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 228652 10215776 Rahaq_4661 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004215368.1 228110 D 741091 CDS YP_004215369.1 322835343 10215777 228824..229063 1 NC_015062.1 KEGG: ebi:EbC_pEb17200660 conserved uncharacterized protein; hypothetical protein 229063 10215777 Rahaq_4662 Rahnella sp. Y9602 hypothetical protein YP_004215369.1 228824 D 741091 CDS YP_004215370.1 322835344 10215778 229247..229540 1 NC_015062.1 KEGG: ebi:EbC_27680 hypothetical protein; hypothetical protein 229540 10215778 Rahaq_4663 Rahnella sp. Y9602 hypothetical protein YP_004215370.1 229247 D 741091 CDS YP_004215371.1 322835345 10215779 229485..229856 1 NC_015062.1 KEGG: pam:PANA_4196 YmgB; hypothetical protein 229856 10215779 Rahaq_4664 Rahnella sp. Y9602 hypothetical protein YP_004215371.1 229485 D 741091 CDS YP_004215372.1 322835346 10215780 229956..230213 1 NC_015062.1 KEGG: pam:PANA_1757 YmgB; hypothetical protein 230213 10215780 Rahaq_4665 Rahnella sp. Y9602 hypothetical protein YP_004215372.1 229956 D 741091 CDS YP_004215373.1 322835347 10215781 complement(230324..231565) 1 NC_015062.1 KEGG: ebi:EbC_22990 diguanylate phosphodiesterase; PFAM: EAL domain protein; BLUF domain protein; SMART: EAL domain protein; diguanylate phosphodiesterase 231565 10215781 Rahaq_4666 Rahnella sp. Y9602 diguanylate phosphodiesterase YP_004215373.1 230324 R 741091 CDS YP_004215374.1 322835348 10215782 231771..232370 1 NC_015062.1 TIGRFAM: tellurite resistance protein TehB; KEGG: spe:Spro_0987 tellurite resistance protein TehB; tellurite resistance protein TehB 232370 10215782 Rahaq_4667 Rahnella sp. Y9602 tellurite resistance protein TehB YP_004215374.1 231771 D 741091 CDS YP_004215375.1 322835349 10215783 232453..232725 1 NC_015062.1 PFAM: protein of unknown function DUF883 ElaB; CsbD family protein; KEGG: enc:ECL_02069 hypothetical protein; hypothetical protein 232725 10215783 Rahaq_4668 Rahnella sp. Y9602 hypothetical protein YP_004215375.1 232453 D 741091 CDS YP_004215376.1 322835350 10215784 complement(232884..233081) 1 NC_015062.1 KEGG: enc:ECL_01835 hypothetical protein; hypothetical protein 233081 10215784 Rahaq_4669 Rahnella sp. Y9602 hypothetical protein YP_004215376.1 232884 R 741091 CDS YP_004215377.1 322835351 10215785 233306..233536 1 NC_015062.1 KEGG: spe:Spro_2343 hypothetical protein; hypothetical protein 233536 10215785 Rahaq_4670 Rahnella sp. Y9602 hypothetical protein YP_004215377.1 233306 D 741091 CDS YP_004215378.1 322835352 10215786 233577..233924 1 NC_015062.1 PFAM: plasmid stabilization system; KEGG: ypg:YpAngola_0124 RelE/ParE family plasmid stabilization system protein; plasmid stabilization system 233924 10215786 Rahaq_4671 Rahnella sp. Y9602 plasmid stabilization system YP_004215378.1 233577 D 741091 CDS YP_004215379.1 322835353 10215787 complement(233987..234418) 1 NC_015062.1 TIGRFAM: peroxiredoxin, OsmC subfamily; KEGG: epy:EpC_25320 osmotically inducible protein C; PFAM: OsmC family protein; OsmC subfamily peroxiredoxin 234418 10215787 Rahaq_4672 Rahnella sp. Y9602 OsmC subfamily peroxiredoxin YP_004215379.1 233987 R 741091 CDS YP_004215380.1 322835354 10215788 234553..234732 1 NC_015062.1 KEGG: pam:PANA_2839 hypothetical protein; hypothetical protein 234732 10215788 Rahaq_4673 Rahnella sp. Y9602 hypothetical protein YP_004215380.1 234553 D 741091 CDS YP_004215381.1 322835355 10215789 234858..235193 1 NC_015062.1 KEGG: pct:PC1_2083 steroid delta-isomerase domain-containing protein; steroid delta-isomerase domain-containing protein 235193 10215789 Rahaq_4674 Rahnella sp. Y9602 steroid delta-isomerase domain-containing protein YP_004215381.1 234858 D 741091 CDS YP_004215382.1 322835356 10215790 235328..235687 1 NC_015062.1 KEGG: ebi:EbC_38620 hypothetical protein; hypothetical protein 235687 10215790 Rahaq_4675 Rahnella sp. Y9602 hypothetical protein YP_004215382.1 235328 D 741091 CDS YP_004215383.1 322835357 10215791 complement(235759..236571) 1 NC_015062.1 KEGG: pam:PANA_0820 MetQ; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; lipoprotein 236571 10215791 Rahaq_4676 Rahnella sp. Y9602 lipoprotein YP_004215383.1 235759 R 741091 CDS YP_004215384.1 322835358 10215792 complement(236768..237979) 1 NC_015062.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_1381 major facilitator transporter; major facilitator superfamily protein 237979 10215792 Rahaq_4677 Rahnella sp. Y9602 major facilitator superfamily protein YP_004215384.1 236768 R 741091 CDS YP_004215385.1 322835359 10215793 complement(238299..238634) 1 NC_015062.1 PFAM: small multidrug resistance protein; KEGG: eta:ETA_34040 DMT superfamily multiple drug (quaternary ammonium compounds) efflux pump; small multidrug resistance protein 238634 10215793 Rahaq_4678 Rahnella sp. Y9602 small multidrug resistance protein YP_004215385.1 238299 R 741091 CDS YP_004215386.1 322835360 10215794 238920..239222 1 NC_015062.1 KEGG: dze:Dd1591_0099 hypothetical protein; hypothetical protein 239222 10215794 Rahaq_4679 Rahnella sp. Y9602 hypothetical protein YP_004215386.1 238920 D 741091 CDS YP_004215387.1 322835361 10215795 239203..240510 1 NC_015062.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: dda:Dd703_0113 Orn/DAP/Arg decarboxylase 2; Orn/DAP/Arg decarboxylase 2 240510 10215795 Rahaq_4680 Rahnella sp. Y9602 Orn/DAP/Arg decarboxylase 2 YP_004215387.1 239203 D 741091 CDS YP_004215388.1 322835362 10215796 240520..241431 1 NC_015062.1 KEGG: dze:Dd1591_0097 hypothetical protein; hypothetical protein 241431 10215796 Rahaq_4681 Rahnella sp. Y9602 hypothetical protein YP_004215388.1 240520 D 741091 CDS YP_004215389.1 322835363 10215797 241434..242441 1 NC_015062.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; KEGG: cai:Caci_3263 3-oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein; 3-oxoacyl-ACP synthase 242441 10215797 Rahaq_4682 Rahnella sp. Y9602 3-oxoacyl-ACP synthase YP_004215389.1 241434 D 741091 CDS YP_004215390.1 322835364 10215798 242438..244018 1 NC_015062.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ddc:Dd586_0107 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 244018 10215798 Rahaq_4683 Rahnella sp. Y9602 AMP-dependent synthetase and ligase YP_004215390.1 242438 D 741091 CDS YP_004215391.1 322835365 10215799 244029..244283 1 NC_015062.1 KEGG: ddc:Dd586_0106 hypothetical protein; hypothetical protein 244283 10215799 Rahaq_4684 Rahnella sp. Y9602 hypothetical protein YP_004215391.1 244029 D 741091 CDS YP_004215392.1 322835366 10215800 244284..245837 1 NC_015062.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ddc:Dd586_0105 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 245837 10215800 Rahaq_4685 Rahnella sp. Y9602 AMP-dependent synthetase and ligase YP_004215392.1 244284 D 741091 CDS YP_004215393.1 322835367 10215801 245806..247320 1 NC_015062.1 PFAM: AMP-dependent synthetase and ligase; KEGG: dze:Dd1591_0093 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 247320 10215801 Rahaq_4686 Rahnella sp. Y9602 AMP-dependent synthetase and ligase YP_004215393.1 245806 D 741091 CDS YP_004215394.1 322835368 10215802 247440..247844 1 NC_015062.1 KEGG: ddc:Dd586_0103 hypothetical protein; hypothetical protein 247844 10215802 Rahaq_4687 Rahnella sp. Y9602 hypothetical protein YP_004215394.1 247440 D 741091 CDS YP_004215395.1 322835369 10215803 247841..248989 1 NC_015062.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: dze:Dd1591_0091 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 248989 10215803 Rahaq_4688 Rahnella sp. Y9602 acyl-CoA dehydrogenase domain-containing protein YP_004215395.1 247841 D 741091 CDS YP_004215396.1 322835370 10215804 248980..249486 1 NC_015062.1 KEGG: dze:Dd1591_0090 hypothetical protein; hypothetical protein 249486 10215804 Rahaq_4689 Rahnella sp. Y9602 hypothetical protein YP_004215396.1 248980 D 741091 CDS YP_004215397.1 322835371 10215805 249486..250307 1 NC_015062.1 KEGG: ddd:Dda3937_00967 hydrolase; hydrolase 250307 10215805 Rahaq_4690 Rahnella sp. Y9602 hydrolase YP_004215397.1 249486 D 741091 CDS YP_004215398.1 322835372 10215806 250291..251277 1 NC_015062.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; KEGG: dze:Dd1591_0089 3-oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein; 3-oxoacyl-ACP synthase 251277 10215806 Rahaq_4691 Rahnella sp. Y9602 3-oxoacyl-ACP synthase YP_004215398.1 250291 D 741091 CDS YP_004215399.1 322835373 10215807 251319..252449 1 NC_015062.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: ddc:Dd586_0099 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 252449 10215807 Rahaq_4692 Rahnella sp. Y9602 acyl-CoA dehydrogenase domain-containing protein YP_004215399.1 251319 D 741091 CDS YP_004215400.1 322835374 10215808 252436..253287 1 NC_015062.1 KEGG: ddd:Dda3937_00958 hypothetical protein; hypothetical protein 253287 10215808 Rahaq_4693 Rahnella sp. Y9602 hypothetical protein YP_004215400.1 252436 D 741091 CDS YP_004215401.1 322835375 10215809 253284..254228 1 NC_015062.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; KEGG: dze:Dd1591_0086 3-oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein; 3-oxoacyl-ACP synthase 254228 10215809 Rahaq_4694 Rahnella sp. Y9602 3-oxoacyl-ACP synthase YP_004215401.1 253284 D 741091 CDS YP_004215402.1 322835376 10215810 254221..255537 1 NC_015062.1 PFAM: cytochrome P450; KEGG: pla:Plav_0082 cytochrome P450; cytochrome P450 255537 10215810 Rahaq_4695 Rahnella sp. Y9602 cytochrome P450 YP_004215402.1 254221 D 741091 CDS YP_004215403.1 322835377 10215811 255521..256576 1 NC_015062.1 PFAM: luciferase; KEGG: scl:sce2387 non-ribosomal peptide synthetase; luciferase 256576 10215811 Rahaq_4696 Rahnella sp. Y9602 luciferase YP_004215403.1 255521 D 741091 CDS YP_004215404.1 322835378 10215812 256592..257248 1 NC_015062.1 KEGG: dze:Dd1591_0085 hypothetical protein; hypothetical protein 257248 10215812 Rahaq_4697 Rahnella sp. Y9602 hypothetical protein YP_004215404.1 256592 D 741091 CDS YP_004215405.1 322835379 10215813 complement(257258..257947) 1 NC_015062.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: ddc:Dd586_0095 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 257947 10215813 Rahaq_4698 Rahnella sp. Y9602 4'-phosphopantetheinyl transferase YP_004215405.1 257258 R 741091 CDS YP_004215406.1 322835380 10215814 complement(257904..259217) 1 NC_015062.1 KEGG: dda:Dd703_0098 histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; multi-sensor signal transduction histidine kinase 259217 10215814 Rahaq_4699 Rahnella sp. Y9602 multi-sensor signal transduction histidine kinase YP_004215406.1 257904 R 741091 CDS YP_004215407.1 322835381 10215815 complement(259210..260622) 1 NC_015062.1 KEGG: dda:Dd703_0097 two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; two component Fis family sigma54-specific transcriptional regulator 260622 10215815 Rahaq_4700 Rahnella sp. Y9602 two component Fis family sigma54-specific transcriptional regulator YP_004215407.1 259210 R 741091 CDS YP_004215408.1 322835382 10215816 complement(260670..263099) 1 NC_015062.1 KEGG: ddc:Dd586_0092 permease; TIGRFAM: permease; PFAM: protein of unknown function DUF214; permease 263099 10215816 Rahaq_4701 Rahnella sp. Y9602 permease YP_004215408.1 260670 R 741091 CDS YP_004215409.1 322835383 10215817 complement(263101..263820) 1 NC_015062.1 KEGG: dze:Dd1591_0080 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 263820 10215817 Rahaq_4702 Rahnella sp. Y9602 ABC transporter YP_004215409.1 263101 R 741091 CDS YP_004215410.1 322835384 10215818 complement(263876..265126) 1 NC_015062.1 KEGG: cps:CPS_2118 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 265126 10215818 Rahaq_4703 Rahnella sp. Y9602 RND family efflux transporter MFP subunit YP_004215410.1 263876 R 741091 CDS YP_004215411.1 322835385 10215819 265557..266102 1 NC_015062.1 KEGG: dze:Dd1591_0079 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 266102 10215819 Rahaq_4704 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004215411.1 265557 D 741091 CDS YP_004215412.1 322835386 10215820 complement(266106..267161) 1 NC_015062.1 PFAM: alpha/beta hydrolase fold; KEGG: ddc:Dd586_0089 hypothetical protein; alpha/beta hydrolase fold protein 267161 10215820 Rahaq_4705 Rahnella sp. Y9602 alpha/beta hydrolase fold protein YP_004215412.1 266106 R 741091 CDS YP_004215413.1 322835387 10215821 complement(267151..268503) 1 NC_015062.1 PFAM: multi antimicrobial extrusion protein MatE; KEGG: ddc:Dd586_0088 multi antimicrobial extrusion protein MatE; multi antimicrobial extrusion protein MatE 268503 10215821 Rahaq_4706 Rahnella sp. Y9602 multi antimicrobial extrusion protein MatE YP_004215413.1 267151 R 741091 CDS YP_004215414.1 322835388 10215822 complement(268500..269141) 1 NC_015062.1 KEGG: dze:Dd1591_0076 hypothetical protein; hypothetical protein 269141 10215822 Rahaq_4707 Rahnella sp. Y9602 hypothetical protein YP_004215414.1 268500 R 741091 CDS YP_004215415.1 322835389 10215823 complement(269134..269394) 1 NC_015062.1 KEGG: dze:Dd1591_0075 hypothetical protein; hypothetical protein 269394 10215823 Rahaq_4708 Rahnella sp. Y9602 hypothetical protein YP_004215415.1 269134 R 741091 CDS YP_004215416.1 322835390 10215824 complement(269369..270328) 1 NC_015062.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; KEGG: dze:Dd1591_0074 3-oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein; 3-oxoacyl-ACP synthase 270328 10215824 Rahaq_4709 Rahnella sp. Y9602 3-oxoacyl-ACP synthase YP_004215416.1 269369 R 741091 CDS YP_004215417.1 322835391 10215825 complement(270510..272312) 1 NC_015062.1 KEGG: pct:PC1_0021 ABC transporter related; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter 272312 10215825 Rahaq_4710 Rahnella sp. Y9602 ABC transporter YP_004215417.1 270510 R 741091 CDS YP_004215418.1 322835392 10215826 complement(272312..273229) 1 NC_015062.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pwa:Pecwa_0020 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 273229 10215826 Rahaq_4711 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004215418.1 272312 R 741091 CDS YP_004215419.1 322835393 10215827 complement(273229..274203) 1 NC_015062.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dda:Dd703_1444 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 274203 10215827 Rahaq_4712 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004215419.1 273229 R 741091 CDS YP_004215420.1 322835394 10215828 complement(274200..275162) 1 NC_015062.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: dze:Dd1591_2617 inosine/uridine-preferring nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase 275162 10215828 Rahaq_4713 Rahnella sp. Y9602 inosine/uridine-preferring nucleoside hydrolase YP_004215420.1 274200 R 741091 CDS YP_004215421.1 322835395 10215829 complement(275167..276117) 1 NC_015062.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: pwa:Pecwa_0017 ribosylpyrimidine nucleosidase; inosine/uridine-preferring nucleoside hydrolase 276117 10215829 Rahaq_4714 Rahnella sp. Y9602 inosine/uridine-preferring nucleoside hydrolase YP_004215421.1 275167 R 741091 CDS YP_004215422.1 322835396 10215830 complement(276114..276998) 1 NC_015062.1 PFAM: dihydrodipicolinate synthetase; KEGG: dda:Dd703_1441 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 276998 10215830 Rahaq_4715 Rahnella sp. Y9602 dihydrodipicolinate synthetase YP_004215422.1 276114 R 741091 CDS YP_004215423.1 322835397 10215831 complement(277092..278651) 1 NC_015062.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA4426 extracellular solute-binding protein; family 5 extracellular solute-binding protein 278651 10215831 Rahaq_4716 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004215423.1 277092 R 741091 CDS YP_004215424.1 322835398 10215832 278792..279679 1 NC_015062.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA4427 LysR family transcriptional regulator; LysR family transcriptional regulator 279679 10215832 Rahaq_4717 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004215424.1 278792 D 741091 CDS YP_004215425.1 322835399 10215833 280077..282554 1 NC_015062.1 TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone repeat-containing protein; KEGG: kpe:KPK_2398 quinate dehydrogenase (pyrroloquinoline-quinone); SMART: Pyrrolo-quinoline quinone beta-propeller repeat; membrane-bound PQQ-dependent dehydrogenase 282554 10215833 Rahaq_4718 Rahnella sp. Y9602 membrane-bound PQQ-dependent dehydrogenase YP_004215425.1 280077 D 741091 CDS YP_004215426.1 322835400 10215834 complement(282618..283913) 1 NC_015062.1 KEGG: tau:Tola_3115 HipA N-terminal domain protein; TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; HipA N-terminal domain-containing protein 283913 10215834 Rahaq_4719 Rahnella sp. Y9602 HipA N-terminal domain-containing protein YP_004215426.1 282618 R 741091 CDS YP_004215427.1 322835401 10215835 complement(283917..284168) 1 NC_015062.1 KEGG: spe:Spro_0567 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 284168 10215835 Rahaq_4720 Rahnella sp. Y9602 helix-turn-helix domain-containing protein YP_004215427.1 283917 R 741091 CDS YP_004215428.1 322835402 10215836 284376..285086 1 NC_015062.1 KEGG: pwa:Pecwa_4253 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain-containing protein; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 285086 10215836 Rahaq_4721 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004215428.1 284376 D 741091 CDS YP_004215429.1 322835403 10215837 complement(285097..286296) 1 NC_015062.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pwa:Pecwa_4254 mandelate racemase/muconate lactonizing protein; mandelate racemase/muconate lactonizing protein 286296 10215837 Rahaq_4722 Rahnella sp. Y9602 mandelate racemase/muconate lactonizing protein YP_004215429.1 285097 R 741091 CDS YP_004215430.1 322835404 10215838 286606..288021 1 NC_015062.1 manually curated; KEGG: pct:PC1_4064 phosphotransferase system EIIC; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; protein-N(pi)-phosphohistidine--sugar phosphotransferase 288021 10215838 Rahaq_4723 Rahnella sp. Y9602 protein-N(pi)-phosphohistidine--sugar phosphotransferase YP_004215430.1 286606 D 741091 CDS YP_004215431.1 322835405 10215839 complement(288028..288900) 1 NC_015062.1 KEGG: cko:CKO_03358 hypothetical protein; PFAM: fumarylacetoacetate (FAA) hydrolase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 288900 10215839 Rahaq_4724 Rahnella sp. Y9602 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_004215431.1 288028 R 741091 CDS YP_004215432.1 322835406 10215840 289059..289982 1 NC_015062.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mno:Mnod_8309 transcriptional regulator, LysR family; LysR family transcriptional regulator 289982 10215840 Rahaq_4725 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004215432.1 289059 D 741091 CDS YP_004215433.1 322835407 10215841 complement(290001..290966) 1 NC_015062.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: kpu:KP1_3099 oligopeptide ABC transport system ATP-binding component; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 290966 10215841 Rahaq_4726 Rahnella sp. Y9602 oligopeptide/dipeptide ABC transporter ATPase YP_004215433.1 290001 R 741091 CDS YP_004215434.1 322835408 10215842 complement(290963..291967) 1 NC_015062.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: spe:Spro_2854 oligopeptide/dipeptide ABC transporter ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 291967 10215842 Rahaq_4727 Rahnella sp. Y9602 oligopeptide/dipeptide ABC transporter ATPase YP_004215434.1 290963 R 741091 CDS YP_004215435.1 322835409 10215843 complement(291964..292911) 1 NC_015062.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kva:Kvar_2274 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 292911 10215843 Rahaq_4728 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004215435.1 291964 R 741091 CDS YP_004215436.1 322835410 10215844 complement(292911..293870) 1 NC_015062.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpn:KPN_02020 oligopeptide ABC transporter, permease; binding-protein-dependent transport system inner membrane protein 293870 10215844 Rahaq_4729 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004215436.1 292911 R 741091 CDS YP_004215437.1 322835411 10215845 complement(293922..295634) 1 NC_015062.1 PFAM: extracellular solute-binding protein family 5; KEGG: kva:Kvar_2276 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein 295634 10215845 Rahaq_4730 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004215437.1 293922 R 741091 CDS YP_004215438.1 322835412 10215846 complement(295933..296919) 1 NC_015062.1 PFAM: initiator RepB protein; KEGG: epy:EpC_pEp360280 plasmid replication protein; initiator RepB protein 296919 10215846 Rahaq_4731 Rahnella sp. Y9602 initiator RepB protein YP_004215438.1 295933 R 741091 CDS YP_004215439.1 322835413 10215847 complement(298295..298504) 1 NC_015062.1 KEGG: epy:EpC_pEp360300 plasmid partitioning protein; plasmid partitioning protein 298504 10215847 Rahaq_4732 Rahnella sp. Y9602 plasmid partitioning protein YP_004215439.1 298295 R 741091 CDS YP_004215440.1 322835414 10215848 complement(298501..299127) 1 NC_015062.1 KEGG: epy:EpC_pEp360310 plasmid partitioning protein; plasmid partitioning protein 299127 10215848 Rahaq_4733 Rahnella sp. Y9602 plasmid partitioning protein YP_004215440.1 298501 R 741091 CDS YP_004215441.1 322835415 10215849 complement(300546..301631) 1 NC_015062.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; KEGG: ypz:YPZ3_2477 ABC-transporter ATP-binding protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 301631 10215849 Rahaq_4734 Rahnella sp. Y9602 spermidine/putrescine ABC transporter ATPase YP_004215441.1 300546 R 741091 CDS YP_004215442.1 322835416 10215850 complement(301882..303438) 1 NC_015062.1 KEGG: ypy:YPK_1334 transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 303438 10215850 Rahaq_4735 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004215442.1 301882 R 741091 CDS YP_004215443.1 322835417 10215851 303585..304853 1 NC_015062.1 KEGG: ypi:YpsIP31758_1218 4-aminobutyrate aminotransferase; TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; 4-aminobutyrate aminotransferase 304853 10215851 Rahaq_4736 Rahnella sp. Y9602 4-aminobutyrate aminotransferase YP_004215443.1 303585 D 741091 CDS YP_004215444.1 322835418 10215852 305131..306159 1 NC_015062.1 PFAM: extracellular solute-binding protein family 1; KEGG: pct:PC1_2230 extracellular solute-binding protein family 1; extracellular solute-binding protein 306159 10215852 Rahaq_4737 Rahnella sp. Y9602 extracellular solute-binding protein YP_004215444.1 305131 D 741091 CDS YP_004215445.1 322835419 10215853 306330..307595 1 NC_015062.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_1220 spermidine/putrescine ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein 307595 10215853 Rahaq_4738 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004215445.1 306330 D 741091 CDS YP_004215446.1 322835420 10215854 307607..308446 1 NC_015062.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypb:YPTS_2913 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 308446 10215854 Rahaq_4739 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004215446.1 307607 D 741091 CDS YP_004215447.1 322835421 10215855 308535..309278 1 NC_015062.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pst:PSPTO_4082 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 309278 10215855 Rahaq_4740 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004215447.1 308535 D 741091 CDS YP_004215448.1 322835422 10215856 309271..310320 1 NC_015062.1 PFAM: aminoglycoside phosphotransferase; KEGG: eca:ECA2059 phosphotransferase; aminoglycoside phosphotransferase 310320 10215856 Rahaq_4741 Rahnella sp. Y9602 aminoglycoside phosphotransferase YP_004215448.1 309271 D 741091 CDS YP_004215449.1 322835423 10215857 310332..311591 1 NC_015062.1 PFAM: aminotransferase class-III; KEGG: pct:PC1_2224 aminotransferase class-III; class III aminotransferase 311591 10215857 Rahaq_4742 Rahnella sp. Y9602 class III aminotransferase YP_004215449.1 310332 D 741091 CDS YP_004215450.1 322835424 10215858 311864..312988 1 NC_015062.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dda:Dd703_0577 diguanylate cyclase; SMART: GGDEF domain containing protein; diguanylate cyclase 312988 10215858 Rahaq_4743 Rahnella sp. Y9602 diguanylate cyclase YP_004215450.1 311864 D 741091 CDS YP_004215451.1 322835425 10215859 complement(313144..313890) 1 NC_015062.1 KEGG: pct:PC1_2179 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 313890 10215859 Rahaq_4744 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004215451.1 313144 R 741091 CDS YP_004215452.1 322835426 10215860 complement(313994..315451) 1 NC_015062.1 TIGRFAM: sugar transporter; KEGG: ebi:EbC_09090 probable metabolite transport protein; sugar transporter 315451 10215860 Rahaq_4745 Rahnella sp. Y9602 sugar transporter YP_004215452.1 313994 R 741091 CDS YP_004215453.1 322835427 10215861 315800..318175 1 NC_015062.1 KEGG: enc:ECL_03864 anaerobic dimethyl sulfoxide reductase subunit A; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; anaerobic dimethyl sulfoxide reductase subunit A 318175 10215861 Rahaq_4746 Rahnella sp. Y9602 anaerobic dimethyl sulfoxide reductase subunit A YP_004215453.1 315800 D 741091 CDS YP_004215454.1 322835428 10215862 318172..318792 1 NC_015062.1 TIGRFAM: dimethylsulfoxide reductase, chain B; KEGG: sea:SeAg_B2681 dimethylsulfoxide reductase, chain B; dimethylsulfoxide reductase subunit B 318792 10215862 Rahaq_4747 Rahnella sp. Y9602 dimethylsulfoxide reductase subunit B YP_004215454.1 318172 D 741091 CDS YP_004215455.1 322835429 10215863 318795..319640 1 NC_015062.1 PFAM: DMSO reductase anchor subunit (DmsC); KEGG: cro:ROD_34421 anaerobic reductase component; DMSO reductase anchor subunit DmsC 319640 10215863 Rahaq_4748 Rahnella sp. Y9602 DMSO reductase anchor subunit DmsC YP_004215455.1 318795 D 741091 CDS YP_004215456.1 322835430 10215864 319640..320521 1 NC_015062.1 KEGG: cro:ROD_34431 polyferredoxin; polyferredoxin 320521 10215864 Rahaq_4749 Rahnella sp. Y9602 polyferredoxin YP_004215456.1 319640 D 741091 CDS YP_004215457.1 322835431 10215865 320523..320711 1 NC_015062.1 hypothetical protein 320711 10215865 Rahaq_4750 Rahnella sp. Y9602 hypothetical protein YP_004215457.1 320523 D 741091 CDS YP_004215458.1 322835432 10215866 320719..321915 1 NC_015062.1 KEGG: ebi:EbC_22580 short-chain alcohol dehydrogenase; PFAM: short-chain alcohol dehydrogenase; trans-2-enoyl-CoA reductase (NAD(+)) 321915 10215866 Rahaq_4751 Rahnella sp. Y9602 trans-2-enoyl-CoA reductase (NAD(+)) YP_004215458.1 320719 D 741091 CDS YP_004215459.1 322835433 10215867 complement(322040..322342) 1 NC_015062.1 KEGG: esa:ESA_pESA3p05475 hypothetical protein; hypothetical protein 322342 10215867 Rahaq_4752 Rahnella sp. Y9602 hypothetical protein YP_004215459.1 322040 R 741091 CDS YP_004215460.1 322835434 10215868 complement(322556..322861) 1 NC_015062.1 KEGG: ebi:EbC_21450 hypothetical protein; hypothetical protein 322861 10215868 Rahaq_4753 Rahnella sp. Y9602 hypothetical protein YP_004215460.1 322556 R 741091 CDS YP_004215461.1 322835435 10215869 323424..323531 1 NC_015062.1 hypothetical protein 323531 10215869 Rahaq_4754 Rahnella sp. Y9602 hypothetical protein YP_004215461.1 323424 D 741091 CDS YP_004215462.1 322835436 10215870 323506..324783 1 NC_015062.1 KEGG: ent:Ent638_1785 sugar-specific permease, SgaT/UlaA; sugar-specific permease, SgaT/UlaA 324783 10215870 Rahaq_4755 Rahnella sp. Y9602 sugar-specific permease, SgaT/UlaA YP_004215462.1 323506 D 741091 CDS YP_004215463.1 322835437 10215871 complement(324915..326300) 1 NC_015062.1 PFAM: aldehyde Dehydrogenase; KEGG: pfl:PFL_3831 aldehyde dehydrogenase family protein; aldehyde Dehydrogenase 326300 10215871 Rahaq_4756 Rahnella sp. Y9602 aldehyde Dehydrogenase YP_004215463.1 324915 R 741091 CDS YP_004215464.1 322835438 10215872 326401..327285 1 NC_015062.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pst:PSPTO_2661 transcriptional regulator, LysR family; LysR family transcriptional regulator 327285 10215872 Rahaq_4757 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004215464.1 326401 D 741091 CDS YP_004215465.1 322835439 10215873 327831..328238 1 NC_015062.1 KEGG: pam:PANA_1291 Hns; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS 328238 10215873 Rahaq_4758 Rahnella sp. Y9602 histone family protein nucleoid-structuring protein H-NS YP_004215465.1 327831 D 741091 CDS YP_004215466.1 322835440 10215874 328451..328984 1 NC_015062.1 KEGG: ddc:Dd586_3189 cytochrome b561; cytochrome b561 328984 10215874 Rahaq_4759 Rahnella sp. Y9602 cytochrome b561 YP_004215466.1 328451 D 741091 CDS YP_004215467.1 322835441 10215875 329147..329611 1 NC_015062.1 KEGG: kva:Kvar_0973 hypothetical protein; hypothetical protein 329611 10215875 Rahaq_4760 Rahnella sp. Y9602 hypothetical protein YP_004215467.1 329147 D 741091 CDS YP_004215468.1 322835442 10215876 329611..329940 1 NC_015062.1 PFAM: protein of unknown function DUF1493; KEGG: spq:SPAB_03607 hypothetical protein; hypothetical protein 329940 10215876 Rahaq_4761 Rahnella sp. Y9602 hypothetical protein YP_004215468.1 329611 D 741091 CDS YP_004215469.1 322835443 10215877 complement(329963..330445) 1 NC_015062.1 KEGG: ses:SARI_00061 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; type VI secretion system effector 330445 10215877 Rahaq_4762 Rahnella sp. Y9602 type VI secretion system effector YP_004215469.1 329963 R 741091 CDS YP_004215470.1 322835444 10215878 complement(330627..331550) 1 NC_015062.1 TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: ebi:EbC_21390 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase 331550 10215878 Rahaq_4763 Rahnella sp. Y9602 2-dehydropantoate 2-reductase YP_004215470.1 330627 R 741091 CDS YP_004215471.1 322835445 10215879 331707..332480 1 NC_015062.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: xne:XNC1_3841 restriction modification system DNA specificity domain:filamentation induced by cAMP protein Fic (fragment); filamentation induced by cAMP protein fic 332480 10215879 Rahaq_4764 Rahnella sp. Y9602 filamentation induced by cAMP protein fic YP_004215471.1 331707 D 741091 CDS YP_004215472.1 322835446 10215880 complement(332533..333555) 1 NC_015062.1 PFAM: inner-membrane translocator; KEGG: ent:Ent638_4073 inner-membrane translocator; inner-membrane translocator 333555 10215880 Rahaq_4765 Rahnella sp. Y9602 inner-membrane translocator YP_004215472.1 332533 R 741091 CDS YP_004215473.1 322835447 10215881 complement(333552..334565) 1 NC_015062.1 PFAM: inner-membrane translocator; KEGG: ent:Ent638_4072 inner-membrane translocator; inner-membrane translocator 334565 10215881 Rahaq_4766 Rahnella sp. Y9602 inner-membrane translocator YP_004215473.1 333552 R 741091 CDS YP_004215474.1 322835448 10215882 complement(334562..336076) 1 NC_015062.1 KEGG: kpu:KP1_0068 rhamnose ABC transport system ATP-binding component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 336076 10215882 Rahaq_4767 Rahnella sp. Y9602 ABC transporter YP_004215474.1 334562 R 741091 CDS YP_004215475.1 322835449 10215883 complement(336145..337137) 1 NC_015062.1 TIGRFAM: rhamnose ABC transporter, periplasmic rhamnose-binding protein; KEGG: ent:Ent638_4070 rhamnose ABC transporter, periplasmic rhamnose-binding protein; rhamnose ABC transporter, periplasmic rhamnose-binding protein 337137 10215883 Rahaq_4768 Rahnella sp. Y9602 rhamnose ABC transporter, periplasmic rhamnose-binding protein YP_004215475.1 336145 R 741091 CDS YP_004215476.1 322835450 10215884 337539..338363 1 NC_015062.1 KEGG: ebi:EbC_20340 HTH-type transcriptional activator RhaS; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 338363 10215884 Rahaq_4769 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004215476.1 337539 D 741091 CDS YP_004215477.1 322835451 10215885 338559..339998 1 NC_015062.1 PFAM: aldehyde Dehydrogenase; KEGG: pct:PC1_4133 aldehyde dehydrogenase A; aldehyde Dehydrogenase 339998 10215885 Rahaq_4770 Rahnella sp. Y9602 aldehyde Dehydrogenase YP_004215477.1 338559 D 741091 CDS YP_004215478.1 322835452 10215886 340070..340651 1 NC_015062.1 PFAM: protein of unknown function DUF162; KEGG: bmj:BMULJ_05703 hypothetical protein; hypothetical protein 340651 10215886 Rahaq_4771 Rahnella sp. Y9602 hypothetical protein YP_004215478.1 340070 D 741091 CDS YP_004215479.1 322835453 10215887 340793..341869 1 NC_015062.1 KEGG: ddd:Dda3937_00950 hypothetical protein; hypothetical protein 341869 10215887 Rahaq_4772 Rahnella sp. Y9602 hypothetical protein YP_004215479.1 340793 D 741091 CDS YP_004215480.1 322835454 10215889 342418..343881 1 NC_015062.1 KEGG: kpn:KPN_03171 hypothetical protein; hypothetical protein 343881 10215889 Rahaq_4774 Rahnella sp. Y9602 hypothetical protein YP_004215480.1 342418 D 741091 CDS YP_004215481.1 322835455 10215890 343881..344699 1 NC_015062.1 KEGG: ent:Ent638_2907 hypothetical protein; hypothetical protein 344699 10215890 Rahaq_4775 Rahnella sp. Y9602 hypothetical protein YP_004215481.1 343881 D 741091 CDS YP_004215482.1 322835456 10215891 complement(344734..345492) 1 NC_015062.1 KEGG: ebi:EbC_08990 hypothetical protein; hypothetical protein 345492 10215891 Rahaq_4776 Rahnella sp. Y9602 hypothetical protein YP_004215482.1 344734 R 741091 CDS YP_004215483.1 322835457 10215892 346280..348433 1 NC_015062.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ebi:EbC_12090 outer membrane receptor YncD; TonB-dependent receptor 348433 10215892 Rahaq_4777 Rahnella sp. Y9602 TonB-dependent receptor YP_004215483.1 346280 D 741091 CDS YP_004215484.1 322835458 10215893 348612..351011 1 NC_015062.1 SMART: Pyrrolo-quinoline quinone beta-propeller repeat; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; KEGG: spe:Spro_3100 quinoprotein glucose dehydrogenase; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone repeat-containing protein; membrane-bound PQQ-dependent dehydrogenase 351011 10215893 Rahaq_4778 Rahnella sp. Y9602 membrane-bound PQQ-dependent dehydrogenase YP_004215484.1 348612 D 741091 CDS YP_004215485.1 322835459 10215894 complement(350981..351304) 1 NC_015062.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: cko:CKO_03886 hypothetical protein; hypothetical protein 351304 10215894 Rahaq_4779 Rahnella sp. Y9602 hypothetical protein YP_004215485.1 350981 R 741091 CDS YP_004215486.1 322835460 10215895 complement(351285..352187) 1 NC_015062.1 KEGG: ebi:EbC_21500 transcriptional regulator, AraC family; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 352187 10215895 Rahaq_4780 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004215486.1 351285 R 741091 CDS YP_004215487.1 322835461 10215896 352322..353065 1 NC_015062.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cak:Caul_2398 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 353065 10215896 Rahaq_4781 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004215487.1 352322 D 741091 CDS YP_004215488.1 322835462 10215897 353083..353487 1 NC_015062.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ebi:EbC_21490 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase 353487 10215897 Rahaq_4782 Rahnella sp. Y9602 Glyoxalase/bleomycin resistance protein/dioxygenase YP_004215488.1 353083 D 741091 CDS YP_004215489.1 322835463 10215898 353484..354467 1 NC_015062.1 PFAM: saccharopine dehydrogenase; KEGG: ebi:EbC_21480 saccharopine dehydrogenase family protein; saccharopine dehydrogenase 354467 10215898 Rahaq_4783 Rahnella sp. Y9602 saccharopine dehydrogenase YP_004215489.1 353484 D 741091 CDS YP_004215490.1 322835464 10215899 complement(354440..355231) 1 NC_015062.1 PFAM: LysR substrate-binding; KEGG: pfs:PFLU4233 LysR-family transcriptional regulator; LysR family transcriptional regulator 355231 10215899 Rahaq_4784 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004215490.1 354440 R 741091 CDS YP_004215491.1 322835465 10215900 complement(355396..356040) 1 NC_015062.1 KEGG: eca:ECA2924 lipoprotein; lipoprotein 356040 10215900 Rahaq_4785 Rahnella sp. Y9602 lipoprotein YP_004215491.1 355396 R 741091 CDS YP_004215492.1 322835466 10215901 complement(356239..356478) 1 NC_015062.1 KEGG: pna:Pnap_4946 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1272; hypothetical protein 356478 10215901 Rahaq_4786 Rahnella sp. Y9602 hypothetical protein YP_004215492.1 356239 R 741091 CDS YP_004215493.1 322835467 10215902 complement(356691..357062) 1 NC_015062.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mll3207 hypothetical protein; Glyoxalase/bleomycin resistance protein/dioxygenase 357062 10215902 Rahaq_4787 Rahnella sp. Y9602 Glyoxalase/bleomycin resistance protein/dioxygenase YP_004215493.1 356691 R 741091 CDS YP_004215494.1 322835468 10215903 complement(357160..357849) 1 NC_015062.1 KEGG: hch:HCH_02020 transcriptional regulator; transcriptional regulator 357849 10215903 Rahaq_4788 Rahnella sp. Y9602 transcriptional regulator YP_004215494.1 357160 R 741091 CDS YP_004215495.1 322835469 10215904 complement(357889..359310) 1 NC_015062.1 PFAM: major facilitator superfamily MFS_1; KEGG: esa:ESA_02053 hypothetical protein; major facilitator superfamily protein 359310 10215904 Rahaq_4789 Rahnella sp. Y9602 major facilitator superfamily protein YP_004215495.1 357889 R 741091 CDS YP_004215496.1 322835470 10215905 359445..360350 1 NC_015062.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_2417 LysR family transcriptional regulator; LysR family transcriptional regulator 360350 10215905 Rahaq_4790 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004215496.1 359445 D 741091 CDS YP_004215497.1 322835471 10215906 complement(360355..361017) 1 NC_015062.1 KEGG: esa:ESA_01397 exodeoxyribonuclease X; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; exonuclease RNase T and DNA polymerase III 361017 10215906 Rahaq_4791 Rahnella sp. Y9602 exonuclease RNase T and DNA polymerase III YP_004215497.1 360355 R 741091 CDS YP_004215498.1 322835472 10215907 361406..362560 1 NC_015062.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: cro:ROD_22211 mandelate racemase/muconate lactonising enzyme; mandelate racemase/muconate lactonizing protein 362560 10215907 Rahaq_4792 Rahnella sp. Y9602 mandelate racemase/muconate lactonizing protein YP_004215498.1 361406 D 741091 CDS YP_004215499.1 322835473 10215908 362612..364255 1 NC_015062.1 PFAM: extracellular solute-binding protein family 5; KEGG: ent:Ent638_2706 extracellular solute-binding protein; family 5 extracellular solute-binding protein 364255 10215908 Rahaq_4793 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004215499.1 362612 D 741091 CDS YP_004215500.1 322835474 10215909 364252..365313 1 NC_015062.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ent:Ent638_2705 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 365313 10215909 Rahaq_4794 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004215500.1 364252 D 741091 CDS YP_004215501.1 322835475 10215910 365310..366215 1 NC_015062.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ent:Ent638_2704 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 366215 10215910 Rahaq_4795 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004215501.1 365310 D 741091 CDS YP_004215502.1 322835476 10215911 366187..367053 1 NC_015062.1 KEGG: kpu:KP1_3752 dipeptide ABC transport system ATP-binding component; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter 367053 10215911 Rahaq_4796 Rahnella sp. Y9602 ABC transporter YP_004215502.1 366187 D 741091 CDS YP_004215503.1 322835477 10215912 367063..367848 1 NC_015062.1 KEGG: kpe:KPK_1631 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 367848 10215912 Rahaq_4797 Rahnella sp. Y9602 ABC transporter YP_004215503.1 367063 D 741091 CDS YP_004215504.1 322835478 10215913 complement(367893..368978) 1 NC_015062.1 KEGG: ebi:EbC_39410 conserved uncharacterized protein; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; type VI secretion protein 368978 10215913 Rahaq_4798 Rahnella sp. Y9602 type VI secretion protein YP_004215504.1 367893 R 741091 CDS YP_004215505.1 322835479 10215914 complement(368942..370717) 1 NC_015062.1 KEGG: ebi:EbC_39400 type VI secretion protein, VCA0110 family; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; type VI secretion protein 370717 10215914 Rahaq_4799 Rahnella sp. Y9602 type VI secretion protein YP_004215505.1 368942 R 741091 CDS YP_004215506.1 322835480 10215915 complement(370717..371250) 1 NC_015062.1 TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: ses:SARI_02713 hypothetical protein; type VI secretion lipoprotein 371250 10215915 Rahaq_4800 Rahnella sp. Y9602 type VI secretion lipoprotein YP_004215506.1 370717 R 741091 CDS YP_004215507.1 322835481 10215916 complement(371237..374605) 1 NC_015062.1 PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: pay:PAU_03820 hypothetical protein; ImcF domain-containing protein 374605 10215916 Rahaq_4801 Rahnella sp. Y9602 ImcF domain-containing protein YP_004215507.1 371237 R 741091 CDS YP_004215508.1 322835482 10215917 complement(374598..376010) 1 NC_015062.1 KEGG: rme:Rmet_0632 hypothetical protein; hypothetical protein 376010 10215917 Rahaq_4802 Rahnella sp. Y9602 hypothetical protein YP_004215508.1 374598 R 741091 CDS YP_004215509.1 322835483 10215918 complement(376010..376264) 1 NC_015062.1 KEGG: kpn:KPN_02253 hypothetical protein; hypothetical protein 376264 10215918 Rahaq_4803 Rahnella sp. Y9602 hypothetical protein YP_004215509.1 376010 R 741091 CDS YP_004215510.1 322835484 10215919 complement(376288..376758) 1 NC_015062.1 KEGG: tva:TVAG_339120 Dopey, N-terminal domain containing protein; hypothetical protein 376758 10215919 Rahaq_4804 Rahnella sp. Y9602 hypothetical protein YP_004215510.1 376288 R 741091 CDS YP_004215511.1 322835485 10215920 complement(376768..377517) 1 NC_015062.1 KEGG: aas:Aasi_0854 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein repeat-containing protein 377517 10215920 Rahaq_4805 Rahnella sp. Y9602 Sel1 domain-containing protein repeat-containing protein YP_004215511.1 376768 R 741091 CDS YP_004215512.1 322835486 10215921 complement(377584..378333) 1 NC_015062.1 KEGG: rso:RSc1943 hypothetical protein; hypothetical protein 378333 10215921 Rahaq_4806 Rahnella sp. Y9602 hypothetical protein YP_004215512.1 377584 R 741091 CDS YP_004215513.1 322835487 10215922 complement(378344..380506) 1 NC_015062.1 KEGG: azo:azo2942 hypothetical protein; hypothetical protein 380506 10215922 Rahaq_4807 Rahnella sp. Y9602 hypothetical protein YP_004215513.1 378344 R 741091 CDS YP_004215514.1 322835488 10215923 complement(380509..383016) 1 NC_015062.1 KEGG: ebi:EbC_39330 type VI secretion system, rhs element Vgr protein; TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; PFAM: Protein of unknown function DUF2345; Rhs element Vgr protein 383016 10215923 Rahaq_4808 Rahnella sp. Y9602 Rhs element Vgr protein YP_004215514.1 380509 R 741091 CDS YP_004215515.1 322835489 10215924 383451..384431 1 NC_015062.1 KEGG: cby:CLM_2337 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; GCN5-related N-acetyltransferase; SMART: regulatory protein MarR; MarR family transcriptional regulator 384431 10215924 Rahaq_4809 Rahnella sp. Y9602 MarR family transcriptional regulator YP_004215515.1 383451 D 741091 CDS YP_004215516.1 322835490 10215925 complement(384448..386235) 1 NC_015062.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pwa:Pecwa_1824 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 386235 10215925 Rahaq_4810 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004215516.1 384448 R 741091 CDS YP_004215517.1 322835491 10215926 complement(386235..387743) 1 NC_015062.1 PFAM: extracellular solute-binding protein family 5; KEGG: pct:PC1_1425 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein 387743 10215926 Rahaq_4811 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004215517.1 386235 R 741091 CDS YP_004215518.1 322835492 10215927 complement(387757..388995) 1 NC_015062.1 PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_1426 major facilitator superfamily MFS_1; major facilitator superfamily protein 388995 10215927 Rahaq_4812 Rahnella sp. Y9602 major facilitator superfamily protein YP_004215518.1 387757 R 741091 CDS YP_004215519.1 322835493 10215928 complement(389000..389815) 1 NC_015062.1 KEGG: eca:ECA1551 ABC transporter ATP binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 389815 10215928 Rahaq_4813 Rahnella sp. Y9602 ABC transporter YP_004215519.1 389000 R 741091 CDS YP_004215520.1 322835494 10215929 complement(389815..390633) 1 NC_015062.1 KEGG: pct:PC1_1428 ABC transporter related; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter 390633 10215929 Rahaq_4814 Rahnella sp. Y9602 ABC transporter YP_004215520.1 389815 R 741091 CDS YP_004215521.1 322835495 10215930 complement(390891..391946) 1 NC_015062.1 TIGRFAM: D-fructose-responsive transcription factor; PFAM: regulatory protein LacI; KEGG: ctu:Ctu_04450 sucrose operon repressor; SMART: regulatory protein LacI; LacI family transcriptional regulator 391946 10215930 Rahaq_4815 Rahnella sp. Y9602 LacI family transcriptional regulator YP_004215521.1 390891 R 741091 CDS YP_004215522.1 322835496 10215931 complement(391947..393356) 1 NC_015062.1 TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32 domain protein; KEGG: eca:ECA0361 sucrose-6-phosphate hydrolase; SMART: glycoside hydrolase family 32; sucrose-6-phosphate hydrolase 393356 10215931 Rahaq_4816 Rahnella sp. Y9602 sucrose-6-phosphate hydrolase YP_004215522.1 391947 R 741091 CDS YP_004215523.1 322835497 10215932 complement(393353..394726) 1 NC_015062.1 TIGRFAM: PTS system, sucrose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PTS system, maltose and glucose-specific subfamily, IIC subunit; KEGG: yen:YE0552 PTS system, sucrose-specific IIBC component; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; PTS system sucrose-specific transporter subunit IIBC 394726 10215932 Rahaq_4817 Rahnella sp. Y9602 PTS system sucrose-specific transporter subunit IIBC YP_004215523.1 393353 R 741091 CDS YP_004215524.1 322835498 10215933 complement(394802..396382) 1 NC_015062.1 PFAM: porin LamB type; KEGG: yen:YE0553 sucrose porin; LamB type porin 396382 10215933 Rahaq_4818 Rahnella sp. Y9602 LamB type porin YP_004215524.1 394802 R 741091 CDS YP_004215525.1 322835499 10215934 396633..397571 1 NC_015062.1 PFAM: PfkB domain protein; KEGG: ecp:ECP_2750 aminoimidazole riboside kinase; PfkB domain-containing protein 397571 10215934 Rahaq_4819 Rahnella sp. Y9602 PfkB domain-containing protein YP_004215525.1 396633 D 741091 CDS YP_004215526.1 322835500 10215935 397786..400209 1 NC_015062.1 KEGG: sgl:SG1935 outer membrane protein assembly factor YaeT; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; outer membrane protein assembly complex, YaeT protein 400209 10215935 Rahaq_4820 Rahnella sp. Y9602 outer membrane protein assembly complex, YaeT protein YP_004215526.1 397786 D 741091 CDS YP_004215527.1 322835501 10215936 complement(400421..400807) 1 NC_015062.1 PFAM: Methionine sulfoxide reductase B; KEGG: slo:Shew_1591 bifunctional methionine sulfoxide reductase B/A protein; methionine sulfoxide reductase B 400807 10215936 Rahaq_4821 Rahnella sp. Y9602 methionine sulfoxide reductase B YP_004215527.1 400421 R 741091 CDS YP_004215528.1 322835502 10215937 complement(400903..402276) 1 NC_015062.1 KEGG: enc:ECL_00053 multidrug efflux transport outer membrane protein EefC; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein 402276 10215937 Rahaq_4822 Rahnella sp. Y9602 NodT family RND efflux system outer membrane lipoprotein YP_004215528.1 400903 R 741091 CDS YP_004215529.1 322835503 10215938 complement(402273..405389) 1 NC_015062.1 KEGG: kpn:KPN_04040 acridine efflux pump; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 405389 10215938 Rahaq_4823 Rahnella sp. Y9602 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_004215529.1 402273 R 741091 CDS YP_004215530.1 322835504 10215939 complement(405389..406528) 1 NC_015062.1 KEGG: kva:Kvar_0061 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 406528 10215939 Rahaq_4824 Rahnella sp. Y9602 RND family efflux transporter MFP subunit YP_004215530.1 405389 R 741091 CDS YP_004215531.1 322835505 10215940 complement(406655..407146) 1 NC_015062.1 PFAM: transcriptional regulator PadR family protein; KEGG: ccs:CCNA_03805 transcriptional regulator; PadR family transcriptional regulator 407146 10215940 Rahaq_4825 Rahnella sp. Y9602 PadR family transcriptional regulator YP_004215531.1 406655 R 741091 CDS YP_004215532.1 322835506 10215941 complement(407418..407999) 1 NC_015062.1 PFAM: protein of unknown function DUF330; KEGG: mei:Msip34_1971 protein of unknown function DUF330; hypothetical protein 407999 10215941 Rahaq_4826 Rahnella sp. Y9602 hypothetical protein YP_004215532.1 407418 R 741091 CDS YP_004215533.1 322835507 10215942 complement(407996..409591) 1 NC_015062.1 PFAM: hypothetical protein; KEGG: pct:PC1_1445 mammalian cell entry related domain protein; hypothetical protein 409591 10215942 Rahaq_4827 Rahnella sp. Y9602 hypothetical protein YP_004215533.1 407996 R 741091 CDS YP_004215534.1 322835508 10215943 complement(409584..410207) 1 NC_015062.1 PFAM: Paraquat-inducible protein A; KEGG: mei:Msip34_1973 paraquat-inducible protein A; paraquat-inducible protein A 410207 10215943 Rahaq_4828 Rahnella sp. Y9602 paraquat-inducible protein A YP_004215534.1 409584 R 741091 CDS YP_004215535.1 322835509 10215944 complement(410204..410821) 1 NC_015062.1 PFAM: Paraquat-inducible protein A; KEGG: mei:Msip34_1974 paraquat-inducible protein A; Paraquat-inducible protein A 410821 10215944 Rahaq_4829 Rahnella sp. Y9602 Paraquat-inducible protein A YP_004215535.1 410204 R 741091 CDS YP_004215536.1 322835510 10215945 complement(410848..411510) 1 NC_015062.1 KEGG: ddd:Dda3937_00082 lipoprotein; lipoprotein 411510 10215945 Rahaq_4830 Rahnella sp. Y9602 lipoprotein YP_004215536.1 410848 R 741091 CDS YP_004215537.1 322835511 10215946 complement(411718..414138) 1 NC_015062.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ebi:EbC_37650 TonB-dependent outer membrane receptor; TonB-dependent receptor 414138 10215946 Rahaq_4831 Rahnella sp. Y9602 TonB-dependent receptor YP_004215537.1 411718 R 741091 CDS YP_004215538.1 322835512 10215947 414477..415088 1 NC_015062.1 PFAM: regulatory protein TetR; KEGG: epy:EpC_18270 TetR-family transcriptional regulator; TetR family transcriptional regulator 415088 10215947 Rahaq_4832 Rahnella sp. Y9602 TetR family transcriptional regulator YP_004215538.1 414477 D 741091 CDS YP_004215539.1 322835513 10215948 415227..416039 1 NC_015062.1 PFAM: FAD-binding 9 siderophore-interacting domain protein; Siderophore-interacting protein; KEGG: efe:EFER_3022 siderophore interacting protein; FAD-binding 9 siderophore-interacting domain-containing protein 416039 10215948 Rahaq_4833 Rahnella sp. Y9602 FAD-binding 9 siderophore-interacting domain-containing protein YP_004215539.1 415227 D 741091 CDS YP_004215540.1 322835514 10215949 416045..416524 1 NC_015062.1 KEGG: ebi:EbC_22520 transcriptional regulator, PadR family; manually curated; PFAM: transcriptional regulator PadR family protein; PadR family transcriptional regulator 416524 10215949 Rahaq_4834 Rahnella sp. Y9602 PadR family transcriptional regulator YP_004215540.1 416045 D 741091 CDS YP_004215541.1 322835515 10215950 complement(416580..417380) 1 NC_015062.1 KEGG: mms:mma_0791 methionyl aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; methionine aminopeptidase 417380 10215950 Rahaq_4835 Rahnella sp. Y9602 methionine aminopeptidase YP_004215541.1 416580 R 741091 CDS YP_004215542.1 322835516 10215951 complement(417373..417627) 1 NC_015062.1 KEGG: pna:Pnap_4817 hypothetical protein; hypothetical protein 417627 10215951 Rahaq_4836 Rahnella sp. Y9602 hypothetical protein YP_004215542.1 417373 R 741091 CDS YP_004215543.1 322835517 10215952 417787..418176 1 NC_015062.1 KEGG: ebi:EbC_15870 conserved uncharacterized protein; hypothetical protein 418176 10215952 Rahaq_4837 Rahnella sp. Y9602 hypothetical protein YP_004215543.1 417787 D 741091 CDS YP_004215544.1 322835518 10215953 complement(418278..418544) 1 NC_015062.1 TIGRFAM: pentapeptide MXKDX repeat protein; KEGG: dac:Daci_3133 pentapeptide MXKDX repeat-containing protein; pentapeptide MXKDX repeat-containing protein 418544 10215953 Rahaq_4838 Rahnella sp. Y9602 pentapeptide MXKDX repeat-containing protein YP_004215544.1 418278 R 741091 CDS YP_004215545.1 322835519 10215954 complement(418596..419399) 1 NC_015062.1 PFAM: oxidoreductase molybdopterin binding; KEGG: spe:Spro_1510 oxidoreductase molybdopterin binding; oxidoreductase molybdopterin binding protein 419399 10215954 Rahaq_4839 Rahnella sp. Y9602 oxidoreductase molybdopterin binding protein YP_004215545.1 418596 R 741091 CDS YP_004215546.1 322835520 10215955 complement(419410..420036) 1 NC_015062.1 KEGG: spe:Spro_1509 thiosulfate reductase cytochrome b subunit (membrane anchoring protein); thiosulfate reductase cytochrome b subunit (membrane anchoring protein) 420036 10215955 Rahaq_4840 Rahnella sp. Y9602 thiosulfate reductase cytochrome b subunit (membrane anchoring protein) YP_004215546.1 419410 R 741091 CDS YP_004215547.1 322835521 10215956 420191..420913 1 NC_015062.1 KEGG: spe:Spro_1508 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 420913 10215956 Rahaq_4841 Rahnella sp. Y9602 winged helix family two component transcriptional regulator YP_004215547.1 420191 D 741091 CDS YP_004215548.1 322835522 10215957 420917..422383 1 NC_015062.1 KEGG: spe:Spro_1507 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 422383 10215957 Rahaq_4842 Rahnella sp. Y9602 integral membrane sensor signal transduction histidine kinase YP_004215548.1 420917 D 741091 CDS YP_004215549.1 322835523 10215958 422630..424129 1 NC_015062.1 PFAM: carboxylyase; KEGG: enc:ECL_01944 3,4-dihydroxybenzoate decarboxylase; carboxylyase 424129 10215958 Rahaq_4843 Rahnella sp. Y9602 carboxylyase YP_004215549.1 422630 D 741091 CDS YP_004215550.1 322835524 10215959 424325..425179 1 NC_015062.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pca:Pcar_2176 LysR family transcriptional regulator; LysR family transcriptional regulator 425179 10215959 Rahaq_4844 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004215550.1 424325 D 741091 CDS YP_004215551.1 322835525 10215960 425295..425615 1 NC_015062.1 PFAM: small multidrug resistance protein; KEGG: pap:PSPA7_3404 transporter; small multidrug resistance protein 425615 10215960 Rahaq_4845 Rahnella sp. Y9602 small multidrug resistance protein YP_004215551.1 425295 D 741091 CDS YP_004215552.1 322835526 10215961 complement(425675..426148) 1 NC_015062.1 KEGG: spe:Spro_3692 transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 426148 10215961 Rahaq_4846 Rahnella sp. Y9602 helix-turn-helix domain-containing protein YP_004215552.1 425675 R 741091 CDS YP_004215553.1 322835527 10215962 complement(426145..427494) 1 NC_015062.1 PFAM: HipA domain protein; KEGG: spe:Spro_3691 HipA domain-containing protein; HipA domain-containing protein 427494 10215962 Rahaq_4847 Rahnella sp. Y9602 HipA domain-containing protein YP_004215553.1 426145 R 741091 CDS YP_004215554.1 322835528 10215963 complement(427690..427911) 1 NC_015062.1 PFAM: protein of unknown function DUF1471; KEGG: pwa:Pecwa_2131 protein of unknown function DUF1471; hypothetical protein 427911 10215963 Rahaq_4848 Rahnella sp. Y9602 hypothetical protein YP_004215554.1 427690 R 741091 CDS YP_004215555.1 322835529 10215964 complement(428079..429209) 1 NC_015062.1 PFAM: protein of unknown function DUF1008; KEGG: yen:YE0333 hypothetical protein; hypothetical protein 429209 10215964 Rahaq_4849 Rahnella sp. Y9602 hypothetical protein YP_004215555.1 428079 R 741091 CDS YP_004215556.1 322835530 10215965 complement(429196..430521) 1 NC_015062.1 KEGG: eic:NT01EI_1913 coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 430521 10215965 Rahaq_4850 Rahnella sp. Y9602 radical SAM protein YP_004215556.1 429196 R 741091 CDS YP_004215557.1 322835531 10215966 complement(430634..431008) 1 NC_015062.1 KEGG: sei:SPC_1747 hypothetical protein; hypothetical protein 431008 10215966 Rahaq_4851 Rahnella sp. Y9602 hypothetical protein YP_004215557.1 430634 R 741091 CDS YP_004215558.1 322835532 10215967 431387..431605 1 NC_015062.1 PFAM: protein of unknown function DUF903; KEGG: ebi:EbC_44280 lipoprotein; hypothetical protein 431605 10215967 Rahaq_4852 Rahnella sp. Y9602 hypothetical protein YP_004215558.1 431387 D 741091 CDS YP_004215559.1 322835533 10215969 432393..433556 1 NC_015062.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: eca:ECA0119 L-lactate dehydrogenase; FMN-dependent alpha-hydroxy acid dehydrogenase 433556 10215969 Rahaq_4854 Rahnella sp. Y9602 FMN-dependent alpha-hydroxy acid dehydrogenase YP_004215559.1 432393 D 741091 CDS YP_004215560.1 322835534 10215970 complement(433601..434728) 1 NC_015062.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: seg:SG1195 predicted phage protein; SMART: GGDEF domain containing protein; diguanylate cyclase 434728 10215970 Rahaq_4855 Rahnella sp. Y9602 diguanylate cyclase YP_004215560.1 433601 R 741091 CDS YP_004215561.1 322835535 10215971 complement(434841..437033) 1 NC_015062.1 KEGG: epy:EpC_05760 coenzyme PQQ synthesis protein F (pyrroloquinoline quinone biosynthesis protein F); TIGRFAM: coenzyme PQQ biosynthesis protein PqqF; PFAM: peptidase M16 domain protein; coenzyme PQQ biosynthesis protein PqqF 437033 10215971 Rahaq_4856 Rahnella sp. Y9602 coenzyme PQQ biosynthesis protein PqqF YP_004215561.1 434841 R 741091 CDS YP_004215562.1 322835536 10215972 complement(437041..438174) 1 NC_015062.1 TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; KEGG: eta:ETA_28860 pyrroloquinoline quinone biosynthesis protein PqqE; SMART: Elongator protein 3/MiaB/NifB; coenzyme PQQ biosynthesis protein E 438174 10215972 Rahaq_4857 Rahnella sp. Y9602 coenzyme PQQ biosynthesis protein E YP_004215562.1 437041 R 741091 CDS YP_004215563.1 322835537 10215973 complement(438161..438448) 1 NC_015062.1 KEGG: ebi:EbC_37740 pyrroloquinoline quinone biosynthesis protein D; pyrroloquinoline quinone biosynthesis protein D 438448 10215973 Rahaq_4858 Rahnella sp. Y9602 pyrroloquinoline quinone biosynthesis protein D YP_004215563.1 438161 R 741091 CDS YP_004215564.1 322835538 10215974 complement(438445..439212) 1 NC_015062.1 PFAM: TENA/THI-4 domain-containing protein; manually curated; KEGG: ebi:EbC_37730 pyrroloquinoline quinone biosynthesis protein C; TIGRFAM: coenzyme PQQ biosynthesis protein C; coenzyme PQQ biosynthesis protein C 439212 10215974 Rahaq_4859 Rahnella sp. Y9602 coenzyme PQQ biosynthesis protein C YP_004215564.1 438445 R 741091 CDS YP_004215565.1 322835539 10215975 complement(439224..440135) 1 NC_015062.1 TIGRFAM: coenzyme PQQ biosynthesis protein B; KEGG: ebi:EbC_37720 pyrroloquinoline quinone biosynthesis protein B; coenzyme PQQ biosynthesis protein B 440135 10215975 Rahaq_4860 Rahnella sp. Y9602 coenzyme PQQ biosynthesis protein B YP_004215565.1 439224 R 741091 CDS YP_004215566.1 322835540 10215976 complement(440194..440265) 1 NC_015062.1 manually curated; TIGRFAM: coenzyme PQQ biosynthesis protein A; KEGG: cps:CPS_0862 coenzyme PQQ biosynthesis protein A; PFAM: coenzyme PQQ biosynthesis protein A; coenzyme PQQ biosynthesis protein A 440265 10215976 Rahaq_4861 Rahnella sp. Y9602 coenzyme PQQ biosynthesis protein A YP_004215566.1 440194 R 741091 CDS YP_004215567.1 322835541 10215977 complement(440436..441473) 1 NC_015062.1 KEGG: ebi:EbC_37710 Zn-dependent dipeptidase; PFAM: peptidase M19 renal dipeptidase; membrane dipeptidase 441473 10215977 Rahaq_4862 Rahnella sp. Y9602 membrane dipeptidase YP_004215567.1 440436 R 741091 CDS YP_004215568.1 322835542 10215978 complement(441748..443973) 1 NC_015062.1 KEGG: ebi:EbC_11400 FhuE receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; TonB-dependent siderophore receptor 443973 10215978 Rahaq_4863 Rahnella sp. Y9602 TonB-dependent siderophore receptor YP_004215568.1 441748 R 741091 CDS YP_004215569.1 322835543 10215979 444660..445562 1 NC_015062.1 PFAM: homocysteine S-methyltransferase; KEGG: dze:Dd1591_3747 homocysteine S-methyltransferase; homocysteine S-methyltransferase 445562 10215979 Rahaq_4864 Rahnella sp. Y9602 homocysteine S-methyltransferase YP_004215569.1 444660 D 741091 CDS YP_004215570.1 322835544 10215980 445629..447173 1 NC_015062.1 PFAM: extracellular solute-binding protein family 5; KEGG: ddd:Dda3937_01275 ABC transporter periplasmic binding-protein; family 5 extracellular solute-binding protein 447173 10215980 Rahaq_4865 Rahnella sp. Y9602 family 5 extracellular solute-binding protein YP_004215570.1 445629 D 741091 CDS YP_004215571.1 322835545 10215981 447187..448206 1 NC_015062.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ddd:Dda3937_01276 ABC transporter permease; binding-protein-dependent transport system inner membrane protein 448206 10215981 Rahaq_4866 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004215571.1 447187 D 741091 CDS YP_004215572.1 322835546 10215982 448225..449040 1 NC_015062.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dze:Dd1591_3744 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 449040 10215982 Rahaq_4867 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004215572.1 448225 D 741091 CDS YP_004215573.1 322835547 10215983 449037..450626 1 NC_015062.1 KEGG: ddc:Dd586_0365 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 450626 10215983 Rahaq_4868 Rahnella sp. Y9602 ABC transporter YP_004215573.1 449037 D 741091 CDS YP_004215574.1 322835548 10215984 450863..452527 1 NC_015062.1 KEGG: ebi:EbC_38940 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 452527 10215984 Rahaq_4869 Rahnella sp. Y9602 methyl-accepting chemotaxis sensory transducer YP_004215574.1 450863 D 741091 CDS YP_004215575.1 322835549 10215985 452653..453540 1 NC_015062.1 KEGG: cro:ROD_12321 beta-lactamase; PFAM: beta-lactamase; beta-lactamase 453540 10215985 Rahaq_4870 Rahnella sp. Y9602 beta-lactamase YP_004215575.1 452653 D 741091 CDS YP_004215576.1 322835550 10215986 453679..454056 1 NC_015062.1 KEGG: ppw:PputW619_2062 hypothetical protein; hypothetical protein 454056 10215986 Rahaq_4871 Rahnella sp. Y9602 hypothetical protein YP_004215576.1 453679 D 741091 CDS YP_004215577.1 322835551 10215987 454614..455996 1 NC_015062.1 KEGG: pwa:Pecwa_2355 diaminobutyrate--2-oxoglutarate aminotransferase; TIGRFAM: 2,4-diaminobutyrate 4-transaminase; PFAM: aminotransferase class-III; 2,4-diaminobutyrate 4-transaminase 455996 10215987 Rahaq_4872 Rahnella sp. Y9602 2,4-diaminobutyrate 4-transaminase YP_004215577.1 454614 D 741091 CDS YP_004215578.1 322835552 10215988 456015..457487 1 NC_015062.1 PFAM: Pyridoxal-dependent decarboxylase; KEGG: spe:Spro_2418 pyridoxal-dependent decarboxylase; pyridoxal-dependent decarboxylase 457487 10215988 Rahaq_4873 Rahnella sp. Y9602 pyridoxal-dependent decarboxylase YP_004215578.1 456015 D 741091 CDS YP_004215579.1 322835553 10215989 458142..459218 1 NC_015062.1 PFAM: MscS Mechanosensitive ion channel; KEGG: enc:ECL_02262 inner membrane protein; mechanosensitive ion channel protein MscS 459218 10215989 Rahaq_4874 Rahnella sp. Y9602 mechanosensitive ion channel protein MscS YP_004215579.1 458142 D 741091 CDS YP_004215580.1 322835554 10215990 complement(459215..461725) 1 NC_015062.1 TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; KEGG: esa:ESA_pESA3p05541 hypothetical protein; SMART: alpha amylase catalytic sub domain; malto-oligosyltrehalose synthase 461725 10215990 Rahaq_4875 Rahnella sp. Y9602 malto-oligosyltrehalose synthase YP_004215580.1 459215 R 741091 CDS YP_004215581.1 322835555 10215991 complement(461722..463509) 1 NC_015062.1 TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; KEGG: ctu:Ctu_1p00990 malto-oligosyltrehalose trehalohydrolase; SMART: alpha amylase catalytic sub domain; malto-oligosyltrehalose trehalohydrolase 463509 10215991 Rahaq_4876 Rahnella sp. Y9602 malto-oligosyltrehalose trehalohydrolase YP_004215581.1 461722 R 741091 CDS YP_004215582.1 322835556 10215992 complement(463654..463845) 1 NC_015062.1 KEGG: dth:DICTH_0353 GGDEF domain protein; hypothetical protein 463845 10215992 Rahaq_4877 Rahnella sp. Y9602 hypothetical protein YP_004215582.1 463654 R 741091 CDS YP_004215583.1 322835557 10215993 464150..465256 1 NC_015062.1 PFAM: periplasmic binding protein; KEGG: spe:Spro_2539 periplasmic binding protein; periplasmic binding protein 465256 10215993 Rahaq_4878 Rahnella sp. Y9602 periplasmic binding protein YP_004215583.1 464150 D 741091 CDS YP_004215584.1 322835558 10215994 complement(465323..465925) 1 NC_015062.1 PFAM: Glutathione S-transferase domain; KEGG: spe:Spro_0989 glutathione S-transferase domain-containing protein; glutathione S-transferase 465925 10215994 Rahaq_4879 Rahnella sp. Y9602 glutathione S-transferase YP_004215584.1 465323 R 741091 CDS YP_004215585.1 322835559 10215995 complement(465930..466781) 1 NC_015062.1 PFAM: alpha/beta hydrolase fold; KEGG: spe:Spro_0990 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 466781 10215995 Rahaq_4880 Rahnella sp. Y9602 alpha/beta hydrolase fold protein YP_004215585.1 465930 R 741091 CDS YP_004215586.1 322835560 10215996 466883..467779 1 NC_015062.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: spe:Spro_0991 LysR family transcriptional regulator; LysR family transcriptional regulator 467779 10215996 Rahaq_4881 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004215586.1 466883 D 741091 CDS YP_004215587.1 322835561 10215997 468013..469701 1 NC_015062.1 KEGG: ses:SARI_00739 hypothetical protein; PFAM: 5TM Receptors of the LytS-YhcK type transmembrane region; GAF domain protein; histidine kinase internal region; ATP-binding region ATPase domain protein; SMART: GAF domain protein; ATP-binding region ATPase domain protein; signal transduction histidine kinase LytS 469701 10215997 Rahaq_4882 Rahnella sp. Y9602 signal transduction histidine kinase LytS YP_004215587.1 468013 D 741091 CDS YP_004215588.1 322835562 10215998 469695..470414 1 NC_015062.1 KEGG: kpu:KP1_3786 two-component response-regulatory protein YehT; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; LytTR family two component transcriptional regulator 470414 10215998 Rahaq_4883 Rahnella sp. Y9602 LytTR family two component transcriptional regulator YP_004215588.1 469695 D 741091 CDS YP_004215589.1 322835563 10215999 complement(470445..471416) 1 NC_015062.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: kva:Kvar_4482 cobalamin synthesis protein P47K; cobalamin synthesis protein P47K 471416 10215999 Rahaq_4884 Rahnella sp. Y9602 cobalamin synthesis protein P47K YP_004215589.1 470445 R 741091 CDS YP_004215590.1 322835564 10216000 complement(471430..471633) 1 NC_015062.1 PFAM: protein of unknown function DUF466; KEGG: eta:ETA_04980 cytoplasmic protein; hypothetical protein 471633 10216000 Rahaq_4885 Rahnella sp. Y9602 hypothetical protein YP_004215590.1 471430 R 741091 CDS YP_004215591.1 322835565 10216001 complement(471694..473847) 1 NC_015062.1 PFAM: carbon starvation protein CstA; KEGG: ses:SARI_03048 hypothetical protein; carbon starvation protein CstA 473847 10216001 Rahaq_4886 Rahnella sp. Y9602 carbon starvation protein CstA YP_004215591.1 471694 R 741091 CDS YP_004215592.1 322835566 10216002 474216..475652 1 NC_015062.1 PFAM: glycoside hydrolase family 1; KEGG: pct:PC1_1461 glycoside hydrolase family 1; glycoside hydrolase 475652 10216002 Rahaq_4887 Rahnella sp. Y9602 glycoside hydrolase YP_004215592.1 474216 D 741091 CDS YP_004215593.1 322835567 10216003 complement(475821..477083) 1 NC_015062.1 KEGG: kva:Kvar_3166 DNA-directed DNA polymerase; PFAM: UMUC domain protein DNA-repair protein; DNA-directed DNA polymerase 477083 10216003 Rahaq_4888 Rahnella sp. Y9602 DNA-directed DNA polymerase YP_004215593.1 475821 R 741091 CDS YP_004215594.1 322835568 10216004 complement(477086..477505) 1 NC_015062.1 PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: kva:Kvar_3165 peptidase S24/S26A/S26B, conserved region; peptidase S24/S26A/S26B 477505 10216004 Rahaq_4889 Rahnella sp. Y9602 peptidase S24/S26A/S26B YP_004215594.1 477086 R 741091 CDS YP_004215595.1 322835569 10216005 complement(477752..478765) 1 NC_015062.1 KEGG: ctu:Ctu_1p00740 hypothetical protein; hypothetical protein 478765 10216005 Rahaq_4890 Rahnella sp. Y9602 hypothetical protein YP_004215595.1 477752 R 741091 CDS YP_004215596.1 322835570 10216006 complement(478965..479804) 1 NC_015062.1 KEGG: ddc:Dd586_2905 hypothetical protein; hypothetical protein 479804 10216006 Rahaq_4891 Rahnella sp. Y9602 hypothetical protein YP_004215596.1 478965 R 741091 CDS YP_004215597.1 322835571 10216007 complement(479838..480557) 1 NC_015062.1 KEGG: ddc:Dd586_2906 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 480557 10216007 Rahaq_4892 Rahnella sp. Y9602 ABC transporter YP_004215597.1 479838 R 741091 CDS YP_004215598.1 322835572 10216008 complement(480554..481333) 1 NC_015062.1 KEGG: ddc:Dd586_2907 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 481333 10216008 Rahaq_4893 Rahnella sp. Y9602 ABC transporter YP_004215598.1 480554 R 741091 CDS YP_004215599.1 322835573 10216009 complement(481330..482217) 1 NC_015062.1 PFAM: inner-membrane translocator; KEGG: ddc:Dd586_2908 inner-membrane translocator; inner-membrane translocator 482217 10216009 Rahaq_4894 Rahnella sp. Y9602 inner-membrane translocator YP_004215599.1 481330 R 741091 CDS YP_004215600.1 322835574 10216010 complement(482210..483103) 1 NC_015062.1 PFAM: inner-membrane translocator; KEGG: ddc:Dd586_2909 inner-membrane translocator; inner-membrane translocator 483103 10216010 Rahaq_4895 Rahnella sp. Y9602 inner-membrane translocator YP_004215600.1 482210 R 741091 CDS YP_004215601.1 322835575 10216011 complement(483152..484279) 1 NC_015062.1 PFAM: Extracellular ligand-binding receptor; KEGG: ddc:Dd586_2910 extracellular ligand-binding receptor; extracellular ligand-binding receptor 484279 10216011 Rahaq_4896 Rahnella sp. Y9602 extracellular ligand-binding receptor YP_004215601.1 483152 R 741091 CDS YP_004215602.1 322835576 10216012 484814..485515 1 NC_015062.1 KEGG: ddc:Dd586_2911 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 485515 10216012 Rahaq_4897 Rahnella sp. Y9602 GntR family transcriptional regulator YP_004215602.1 484814 D 741091 CDS YP_004215603.1 322835577 10216013 485637..486815 1 NC_015062.1 TIGRFAM: amidohydrolase; KEGG: ddc:Dd586_2912 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 486815 10216013 Rahaq_4898 Rahnella sp. Y9602 amidohydrolase YP_004215603.1 485637 D 741091 CDS YP_004215604.1 322835578 10216014 486818..487621 1 NC_015062.1 TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: ddc:Dd586_2913 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; pyrroline-5-carboxylate reductase 487621 10216014 Rahaq_4899 Rahnella sp. Y9602 pyrroline-5-carboxylate reductase YP_004215604.1 486818 D 741091 CDS YP_004215605.1 322835579 10216015 complement(487752..488858) 1 NC_015062.1 PFAM: ABC transporter; KEGG: ent:Ent638_1283 ABC transporter; ABC transporter 488858 10216015 Rahaq_4900 Rahnella sp. Y9602 ABC transporter YP_004215605.1 487752 R 741091 CDS YP_004215606.1 322835580 10216016 complement(488868..490004) 1 NC_015062.1 PFAM: ABC transporter; KEGG: kva:Kvar_3560 ABC transporter; ABC transporter 490004 10216016 Rahaq_4901 Rahnella sp. Y9602 ABC transporter YP_004215606.1 488868 R 741091 CDS YP_004215607.1 322835581 10216017 complement(489997..491742) 1 NC_015062.1 KEGG: sea:SeAg_B0852 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 491742 10216017 Rahaq_4902 Rahnella sp. Y9602 ABC transporter YP_004215607.1 489997 R 741091 CDS YP_004215608.1 322835582 10216018 complement(491729..492733) 1 NC_015062.1 PFAM: secretion protein HlyD family protein; KEGG: enc:ECL_02940 HlyD family secretion protein; secretion protein HlyD family protein 492733 10216018 Rahaq_4903 Rahnella sp. Y9602 secretion protein HlyD family protein YP_004215608.1 491729 R 741091 CDS YP_004215609.1 322835583 10216019 complement(492747..493418) 1 NC_015062.1 PFAM: TetR family transcriptional regulator ; regulatory protein TetR; KEGG: enc:ECL_02939 DNA-binding transcriptional regulator; TetR family transcriptional regulator 493418 10216019 Rahaq_4904 Rahnella sp. Y9602 TetR family transcriptional regulator YP_004215609.1 492747 R 741091 CDS YP_004215610.1 322835584 10216021 493943..495103 1 NC_015062.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: asu:Asuc_0403 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 495103 10216021 Rahaq_4906 Rahnella sp. Y9602 iron-containing alcohol dehydrogenase YP_004215610.1 493943 D 741091 CDS YP_004215611.1 322835585 10216024 complement(496169..496615) 1 NC_015062.1 PFAM: protein of unknown function DUF1486; KEGG: ebi:EbC_26010 hypothetical protein; hypothetical protein 496615 10216024 Rahaq_4909 Rahnella sp. Y9602 hypothetical protein YP_004215611.1 496169 R 741091 CDS YP_004215612.1 322835586 10216025 496734..497648 1 NC_015062.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebi:EbC_26020 transcriptional regulator, LysR family; LysR family transcriptional regulator 497648 10216025 Rahaq_4910 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004215612.1 496734 D 741091 CDS YP_004215613.1 322835587 10216026 complement(497738..498598) 1 NC_015062.1 PFAM: aldo/keto reductase; KEGG: kpn:KPN_03272 aldo/keto reductase; aldo/keto reductase 498598 10216026 Rahaq_4911 Rahnella sp. Y9602 aldo/keto reductase YP_004215613.1 497738 R 741091 CDS YP_004215614.1 322835588 10216027 complement(498735..499091) 1 NC_015062.1 PFAM: protein of unknown function DUF1493; KEGG: yen:YE2290 phage-associated acyl carrier protein; hypothetical protein 499091 10216027 Rahaq_4912 Rahnella sp. Y9602 hypothetical protein YP_004215614.1 498735 R 741091 CDS YP_004215615.1 322835589 10216028 complement(499078..500160) 1 NC_015062.1 PFAM: glycosyl transferase family 9; KEGG: epy:EpC_00900 glycosyl transferase, family 9; glycosyl transferase family protein 500160 10216028 Rahaq_4913 Rahnella sp. Y9602 glycosyl transferase family protein YP_004215615.1 499078 R 741091 CDS YP_004215616.1 322835590 10216029 complement(500238..501257) 1 NC_015062.1 PFAM: glycosyl transferase family 9; KEGG: tye:THEYE_A0426 glycosyl transferase, family 9; glycosyl transferase family protein 501257 10216029 Rahaq_4914 Rahnella sp. Y9602 glycosyl transferase family protein YP_004215616.1 500238 R 741091 CDS YP_004215617.1 322835591 10216030 501609..502580 1 NC_015062.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebi:EbC_12050 transcriptional regulator, LysR family; LysR family transcriptional regulator 502580 10216030 Rahaq_4915 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004215617.1 501609 D 741091 CDS YP_004215618.1 322835592 10216031 complement(502585..503160) 1 NC_015062.1 PFAM: protein of unknown function DUF204; KEGG: epy:EpC_35850 hypothetical protein; hypothetical protein 503160 10216031 Rahaq_4916 Rahnella sp. Y9602 hypothetical protein YP_004215618.1 502585 R 741091 CDS YP_004215619.1 322835593 10216032 503886..504365 1 NC_015062.1 KEGG: pay:PAU_02282 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: Uncharacterised conserved protein UCP028301; type VI secretion protein 504365 10216032 Rahaq_4917 Rahnella sp. Y9602 type VI secretion protein YP_004215619.1 503886 D 741091 CDS YP_004215620.1 322835594 10216033 504362..505843 1 NC_015062.1 KEGG: pay:PAU_02281 hypothetical protein; TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; type VI secretion protein EvpB 505843 10216033 Rahaq_4918 Rahnella sp. Y9602 type VI secretion protein EvpB YP_004215620.1 504362 D 741091 CDS YP_004215621.1 322835595 10216034 505873..506364 1 NC_015062.1 PFAM: protein of unknown function DUF796; KEGG: pay:PAU_02280 hypothetical protein; hypothetical protein 506364 10216034 Rahaq_4919 Rahnella sp. Y9602 hypothetical protein YP_004215621.1 505873 D 741091 CDS YP_004215622.1 322835596 10216035 506417..506833 1 NC_015062.1 PFAM: GPW/gp25 family protein; KEGG: pay:PAU_02279 hypothetical protein; GPW/gp25 family protein 506833 10216035 Rahaq_4920 Rahnella sp. Y9602 GPW/gp25 family protein YP_004215622.1 506417 D 741091 CDS YP_004215623.1 322835597 10216036 506846..508648 1 NC_015062.1 KEGG: plu:plu2297 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; type VI secretion protein 508648 10216036 Rahaq_4921 Rahnella sp. Y9602 type VI secretion protein YP_004215623.1 506846 D 741091 CDS YP_004215624.1 322835598 10216037 508639..509586 1 NC_015062.1 KEGG: pay:PAU_02277 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; type VI secretion protein 509586 10216037 Rahaq_4922 Rahnella sp. Y9602 type VI secretion protein YP_004215624.1 508639 D 741091 CDS YP_004215625.1 322835599 10216038 509590..511503 1 NC_015062.1 TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; KEGG: pay:PAU_02276 hypothetical protein; ImpA family type VI secretion-associated protein 511503 10216038 Rahaq_4923 Rahnella sp. Y9602 ImpA family type VI secretion-associated protein YP_004215625.1 509590 D 741091 CDS YP_004215626.1 322835600 10216039 511517..512032 1 NC_015062.1 KEGG: eck:EC55989_3291 hypothetical protein; hypothetical protein 512032 10216039 Rahaq_4924 Rahnella sp. Y9602 hypothetical protein YP_004215626.1 511517 D 741091 CDS YP_004215627.1 322835601 10216040 512032..512331 1 NC_015062.1 PFAM: PAAR repeat-containing protein; KEGG: etr:ETAE_2438 type VI secretion system protein EvpJ; PAAR repeat-containing protein 512331 10216040 Rahaq_4925 Rahnella sp. Y9602 PAAR repeat-containing protein YP_004215627.1 512032 D 741091 CDS YP_004215628.1 322835602 10216041 512343..513407 1 NC_015062.1 KEGG: eck:EC55989_3289 hypothetical protein; TIGRFAM: type VI secretion-associated protein, ImpA family; PFAM: ImpA domain protein; type VI secretion-associated protein, ImpA family 513407 10216041 Rahaq_4926 Rahnella sp. Y9602 type VI secretion-associated protein, ImpA family YP_004215628.1 512343 D 741091 CDS YP_004215629.1 322835603 10216042 513404..513979 1 NC_015062.1 TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: pay:PAU_02272 hypothetical protein; type VI secretion lipoprotein 513979 10216042 Rahaq_4927 Rahnella sp. Y9602 type VI secretion lipoprotein YP_004215629.1 513404 D 741091 CDS YP_004215630.1 322835604 10216043 513979..515373 1 NC_015062.1 KEGG: pay:PAU_02271 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; type VI secretion protein 515373 10216043 Rahaq_4928 Rahnella sp. Y9602 type VI secretion protein YP_004215630.1 513979 D 741091 CDS YP_004215631.1 322835605 10216044 515370..515996 1 NC_015062.1 PFAM: type IV / VI secretion system, DotU; KEGG: eck:EC55989_3285 hypothetical protein; type IV / VI secretion system, DotU 515996 10216044 Rahaq_4929 Rahnella sp. Y9602 type IV / VI secretion system, DotU YP_004215631.1 515370 D 741091 CDS YP_004215632.1 322835606 10216045 516003..519440 1 NC_015062.1 KEGG: pay:PAU_02269 hypothetical protein; hypothetical protein 519440 10216045 Rahaq_4930 Rahnella sp. Y9602 hypothetical protein YP_004215632.1 516003 D 741091 CDS YP_004215633.1 322835607 10216046 519486..522056 1 NC_015062.1 TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: pay:PAU_02268 ClpA/B-type chaperone; SMART: AAA ATPase; type VI secretion ATPase, ClpV1 family 522056 10216046 Rahaq_4931 Rahnella sp. Y9602 type VI secretion ATPase, ClpV1 family YP_004215633.1 519486 D 741091 CDS YP_004215634.1 322835608 10216047 522077..523426 1 NC_015062.1 KEGG: ypi:YpsIP31758_0805 ImpA domain-containing protein; hypothetical protein 523426 10216047 Rahaq_4932 Rahnella sp. Y9602 hypothetical protein YP_004215634.1 522077 D 741091 CDS YP_004215635.1 322835609 10216048 523465..524178 1 NC_015062.1 KEGG: hde:HDEF_1405 RTX-family protein-18; hypothetical protein 524178 10216048 Rahaq_4933 Rahnella sp. Y9602 hypothetical protein YP_004215635.1 523465 D 741091 CDS YP_004215636.1 322835610 10216049 524374..526248 1 NC_015062.1 KEGG: ctu:Ctu_42080 potassium transport protein Kup; TIGRFAM: potassium uptake protein; PFAM: K potassium transporter; potassium uptake protein 526248 10216049 Rahaq_4934 Rahnella sp. Y9602 potassium uptake protein YP_004215636.1 524374 D 741091 CDS YP_004215637.1 322835611 10216050 complement(526300..527058) 1 NC_015062.1 KEGG: ebi:EbC_22120 hypothetical protein; hypothetical protein 527058 10216050 Rahaq_4935 Rahnella sp. Y9602 hypothetical protein YP_004215637.1 526300 R 741091 CDS YP_004215638.1 322835612 10216051 527213..528100 1 NC_015062.1 PFAM: beta-lactamase; KEGG: sit:TM1040_1900 beta-lactamase; beta-lactamase 528100 10216051 Rahaq_4936 Rahnella sp. Y9602 beta-lactamase YP_004215638.1 527213 D 741091 CDS YP_004215639.1 322835613 10216052 complement(528114..528509) 1 NC_015062.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bph:Bphy_3323 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 528509 10216052 Rahaq_4937 Rahnella sp. Y9602 glyoxalase/bleomycin resistance protein/dioxygenase YP_004215639.1 528114 R 741091 CDS YP_004215640.1 322835614 10216053 528648..529646 1 NC_015062.1 KEGG: yen:YE2511 hypothetical protein; hypothetical protein 529646 10216053 Rahaq_4938 Rahnella sp. Y9602 hypothetical protein YP_004215640.1 528648 D 741091 CDS YP_004215641.1 322835615 10216054 529734..530906 1 NC_015062.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE2512 inner membrane protein; major facilitator superfamily protein 530906 10216054 Rahaq_4939 Rahnella sp. Y9602 major facilitator superfamily protein YP_004215641.1 529734 D 741091 CDS YP_004215642.1 322835616 10216055 531023..531835 1 NC_015062.1 KEGG: yen:YE2513 hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase 531835 10216055 Rahaq_4940 Rahnella sp. Y9602 cof family hydrolase YP_004215642.1 531023 D 741091 CDS YP_004215643.1 322835617 10216056 complement(531914..532453) 1 NC_015062.1 KEGG: dda:Dd703_3534 hypothetical protein; hypothetical protein 532453 10216056 Rahaq_4941 Rahnella sp. Y9602 hypothetical protein YP_004215643.1 531914 R 741091 CDS YP_004215644.1 322835618 10216057 complement(532468..532815) 1 NC_015062.1 KEGG: dda:Dd703_3535 hypothetical protein; hypothetical protein 532815 10216057 Rahaq_4942 Rahnella sp. Y9602 hypothetical protein YP_004215644.1 532468 R 741091 CDS YP_004215645.1 322835619 10216058 complement(533075..533518) 1 NC_015062.1 KEGG: eta:ETA_22020 transcriptional regulator; PFAM: iron dependent repressor; SMART: iron dependent repressor; DtxR family iron (metal) dependent repressor 533518 10216058 Rahaq_4943 Rahnella sp. Y9602 DtxR family iron (metal) dependent repressor YP_004215645.1 533075 R 741091 CDS YP_004215646.1 322835620 10216059 533706..534647 1 NC_015062.1 PFAM: periplasmic solute binding protein; KEGG: spe:Spro_2133 periplasmic solute binding protein; periplasmic solute binding protein 534647 10216059 Rahaq_4944 Rahnella sp. Y9602 periplasmic solute binding protein YP_004215646.1 533706 D 741091 CDS YP_004215647.1 322835621 10216060 534644..535423 1 NC_015062.1 KEGG: spe:Spro_2132 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 535423 10216060 Rahaq_4945 Rahnella sp. Y9602 ABC transporter YP_004215647.1 534644 D 741091 CDS YP_004215648.1 322835622 10216061 535420..536274 1 NC_015062.1 PFAM: ABC transporter; KEGG: ypb:YPTS_2423 ABC transporter; ABC transporter 536274 10216061 Rahaq_4946 Rahnella sp. Y9602 ABC transporter YP_004215648.1 535420 D 741091 CDS YP_004215649.1 322835623 10216062 536271..537125 1 NC_015062.1 PFAM: ABC transporter; KEGG: ddd:Dda3937_00373 manganese ABC transporter inner membrane permease SitD; ABC transporter 537125 10216062 Rahaq_4947 Rahnella sp. Y9602 ABC transporter YP_004215649.1 536271 D 741091 CDS YP_004215650.1 322835624 10216063 537265..537444 1 NC_015062.1 KEGG: tac:Ta1473 hypothetical protein; hypothetical protein 537444 10216063 Rahaq_4948 Rahnella sp. Y9602 hypothetical protein YP_004215650.1 537265 D 741091 CDS YP_004215651.1 322835625 10216064 complement(537611..538855) 1 NC_015062.1 KEGG: cko:CKO_02850 tryptophan permease; TIGRFAM: aromatic amino acid transporter; PFAM: Tryptophan/tyrosine permease; aromatic amino acid transporter 538855 10216064 Rahaq_4949 Rahnella sp. Y9602 aromatic amino acid transporter YP_004215651.1 537611 R 741091 CDS YP_004215652.1 322835626 10216065 complement(539799..540533) 1 NC_015062.1 PFAM: Pirin domain protein; KEGG: ebi:EbC_pEb10200360 pirin domain protein; pirin 540533 10216065 Rahaq_4950 Rahnella sp. Y9602 pirin YP_004215652.1 539799 R 741091 CDS YP_004215653.1 322835627 10216066 complement(540604..541635) 1 NC_015062.1 KEGG: spe:Spro_2529 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 541635 10216066 Rahaq_4951 Rahnella sp. Y9602 ABC transporter YP_004215653.1 540604 R 741091 CDS YP_004215654.1 322835628 10216067 complement(541815..542939) 1 NC_015062.1 PFAM: lambda integrase ; integrase family protein; KEGG: sgl:SG1699 phage integrase; lambda integrase 542939 10216067 Rahaq_4952 Rahnella sp. Y9602 lambda integrase YP_004215654.1 541815 R 741091 CDS YP_004215655.1 322835629 10216068 complement(542923..543165) 1 NC_015062.1 KEGG: ecz:ECS88_1328 phage excisionase; phage excisionase 543165 10216068 Rahaq_4953 Rahnella sp. Y9602 phage excisionase YP_004215655.1 542923 R 741091 CDS YP_004215656.1 322835630 10216069 complement(543244..543747) 1 NC_015062.1 PFAM: Gp157 family protein; KEGG: epy:EpC_17420 conserved uncharacterized protein; Gp157 family protein 543747 10216069 Rahaq_4954 Rahnella sp. Y9602 Gp157 family protein YP_004215656.1 543244 R 741091 CDS YP_004215657.1 322835631 10216070 complement(543744..546122) 1 NC_015062.1 KEGG: epy:EpC_17430 similarities with exodeoxyribonuclease VIII; hypothetical protein 546122 10216070 Rahaq_4955 Rahnella sp. Y9602 hypothetical protein YP_004215657.1 543744 R 741091 CDS YP_004215658.1 322835632 10216071 complement(546142..546441) 1 NC_015062.1 KEGG: xce:Xcel_0917 extracellular solute-binding protein family 1; hypothetical protein 546441 10216071 Rahaq_4956 Rahnella sp. Y9602 hypothetical protein YP_004215658.1 546142 R 741091 CDS YP_004215659.1 322835633 10216072 complement(546664..546960) 1 NC_015062.1 KEGG: ere:EUBREC_1081 periplasmic alpha-amylase precursor; hypothetical protein 546960 10216072 Rahaq_4957 Rahnella sp. Y9602 hypothetical protein YP_004215659.1 546664 R 741091 CDS YP_004215660.1 322835634 10216073 complement(547109..547264) 1 NC_015062.1 KEGG: bvu:BVU_0833 two-component system sensor histidine kinase; hypothetical protein 547264 10216073 Rahaq_4958 Rahnella sp. Y9602 hypothetical protein YP_004215660.1 547109 R 741091 CDS YP_004215661.1 322835635 10216074 complement(547581..547943) 1 NC_015062.1 KEGG: bbr:BB4657 hemin binding protein; hypothetical protein 547943 10216074 Rahaq_4959 Rahnella sp. Y9602 hypothetical protein YP_004215661.1 547581 R 741091 CDS YP_004215662.1 322835636 10216075 complement(548149..548610) 1 NC_015062.1 PFAM: helix-turn-helix domain protein; KEGG: set:SEN1383 predicted phage protein; helix-turn-helix domain-containing protein 548610 10216075 Rahaq_4960 Rahnella sp. Y9602 helix-turn-helix domain-containing protein YP_004215662.1 548149 R 741091 CDS YP_004215663.1 322835637 10216076 548714..548962 1 NC_015062.1 KEGG: ecq:ECED1_1006 regulator of the C1 family (possibly fragment); PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 548962 10216076 Rahaq_4961 Rahnella sp. Y9602 helix-turn-helix domain-containing protein YP_004215663.1 548714 D 741091 CDS YP_004215664.1 322835638 10216077 548973..549437 1 NC_015062.1 PFAM: protein of unknown function DUF1019; KEGG: ecq:ECED1_1738 conserved hypothetical protein from phage origin; hypothetical protein 549437 10216077 Rahaq_4962 Rahnella sp. Y9602 hypothetical protein YP_004215664.1 548973 D 741091 CDS YP_004215665.1 322835639 10216078 549454..549690 1 NC_015062.1 KEGG: brm:Bmur_1018 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 549690 10216078 Rahaq_4963 Rahnella sp. Y9602 OmpA/MotB domain-containing protein YP_004215665.1 549454 D 741091 CDS YP_004215666.1 322835640 10216079 549687..549854 1 NC_015062.1 hypothetical protein 549854 10216079 Rahaq_4964 Rahnella sp. Y9602 hypothetical protein YP_004215666.1 549687 D 741091 CDS YP_004215667.1 322835641 10216080 549857..550843 1 NC_015062.1 KEGG: spq:SPAB_02260 hypothetical protein; hypothetical protein 550843 10216080 Rahaq_4965 Rahnella sp. Y9602 hypothetical protein YP_004215667.1 549857 D 741091 CDS YP_004215668.1 322835642 10216081 550833..551279 1 NC_015062.1 KEGG: eoh:ECO103_1368 replication protein; replication protein 551279 10216081 Rahaq_4966 Rahnella sp. Y9602 replication protein YP_004215668.1 550833 D 741091 CDS YP_004215669.1 322835643 10216082 551407..551883 1 NC_015062.1 KEGG: enc:ECL_01667 hypothetical protein; hypothetical protein 551883 10216082 Rahaq_4967 Rahnella sp. Y9602 hypothetical protein YP_004215669.1 551407 D 741091 CDS YP_004215670.1 322835644 10216083 551876..552298 1 NC_015062.1 KEGG: etr:ETAE_1605 hypothetical protein; hypothetical protein 552298 10216083 Rahaq_4968 Rahnella sp. Y9602 hypothetical protein YP_004215670.1 551876 D 741091 CDS YP_004215671.1 322835645 10216084 552295..552789 1 NC_015062.1 KEGG: sed:SeD_A2298 hypothetical protein; hypothetical protein 552789 10216084 Rahaq_4969 Rahnella sp. Y9602 hypothetical protein YP_004215671.1 552295 D 741091 CDS YP_004215672.1 322835646 10216085 552786..552974 1 NC_015062.1 KEGG: lcz:LCAZH_2090 hypothetical protein; hypothetical protein 552974 10216085 Rahaq_4970 Rahnella sp. Y9602 hypothetical protein YP_004215672.1 552786 D 741091 CDS YP_004215673.1 322835647 10216086 552974..553234 1 NC_015062.1 KEGG: cel:T21E3.3 Low-density lipoprotein Receptor Related family member (lrp-2); hypothetical protein 553234 10216086 Rahaq_4971 Rahnella sp. Y9602 hypothetical protein YP_004215673.1 552974 D 741091 CDS YP_004215674.1 322835648 10216087 553238..553921 1 NC_015062.1 KEGG: ecg:E2348C_2779 hypothetical protein; hypothetical protein 553921 10216087 Rahaq_4972 Rahnella sp. Y9602 hypothetical protein YP_004215674.1 553238 D 741091 CDS YP_004215675.1 322835649 10216088 553918..554121 1 NC_015062.1 KEGG: pop:POPTR_920495 hypothetical protein; hypothetical protein 554121 10216088 Rahaq_4973 Rahnella sp. Y9602 hypothetical protein YP_004215675.1 553918 D 741091 CDS YP_004215676.1 322835650 10216089 554114..554623 1 NC_015062.1 KEGG: eoh:ECO103_2873 hypothetical protein; hypothetical protein 554623 10216089 Rahaq_4974 Rahnella sp. Y9602 hypothetical protein YP_004215676.1 554114 D 741091 CDS YP_004215677.1 322835651 10216090 554620..554853 1 NC_015062.1 KEGG: lpp:lpp1322 hypothetical protein; hypothetical protein 554853 10216090 Rahaq_4975 Rahnella sp. Y9602 hypothetical protein YP_004215677.1 554620 D 741091 CDS YP_004215678.1 322835652 10216091 554850..555296 1 NC_015062.1 KEGG: cre:CHLREDRAFT_189109 flagellar associated protein; hypothetical protein 555296 10216091 Rahaq_4976 Rahnella sp. Y9602 hypothetical protein YP_004215678.1 554850 D 741091 CDS YP_004215679.1 322835653 10216092 555296..555478 1 NC_015062.1 KEGG: mth:MTH1314 transcription elongation factor TFIIS; hypothetical protein 555478 10216092 Rahaq_4977 Rahnella sp. Y9602 hypothetical protein YP_004215679.1 555296 D 741091 CDS YP_004215680.1 322835654 10216093 555475..555771 1 NC_015062.1 KEGG: mcc:696763 small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta; hypothetical protein 555771 10216093 Rahaq_4978 Rahnella sp. Y9602 hypothetical protein YP_004215680.1 555475 D 741091 CDS YP_004215681.1 322835655 10216094 555811..555993 1 NC_015062.1 hypothetical protein 555993 10216094 Rahaq_4979 Rahnella sp. Y9602 hypothetical protein YP_004215681.1 555811 D 741091 CDS YP_004215682.1 322835656 10216095 556225..556419 1 NC_015062.1 KEGG: ecy:ECSE_2236 hypothetical protein; hypothetical protein 556419 10216095 Rahaq_4980 Rahnella sp. Y9602 hypothetical protein YP_004215682.1 556225 D 741091 CDS YP_004215683.1 322835657 10216096 556512..557108 1 NC_015062.1 PFAM: protein of unknown function DUF1367; KEGG: see:SNSL254_A1146 gifsy-2 prophage protein; hypothetical protein 557108 10216096 Rahaq_4981 Rahnella sp. Y9602 hypothetical protein YP_004215683.1 556512 D 741091 CDS YP_004215684.1 322835658 10216097 557105..557401 1 NC_015062.1 KEGG: enc:ECL_01672 hypothetical protein; hypothetical protein 557401 10216097 Rahaq_4982 Rahnella sp. Y9602 hypothetical protein YP_004215684.1 557105 D 741091 CDS YP_004215685.1 322835659 10216098 557398..558072 1 NC_015062.1 PFAM: antitermination Q family protein; KEGG: epy:EpC_17570 conserved phage protein; antitermination Q family protein 558072 10216098 Rahaq_4983 Rahnella sp. Y9602 antitermination Q family protein YP_004215685.1 557398 D 741091 CDS YP_004215686.1 322835660 10216099 558245..558463 1 NC_015062.1 PFAM: Lysis S family protein; KEGG: yps:YPTB1804 holin protein; Lysis S family protein 558463 10216099 Rahaq_4984 Rahnella sp. Y9602 Lysis S family protein YP_004215686.1 558245 D 741091 CDS YP_004215687.1 322835661 10216100 558466..558996 1 NC_015062.1 KEGG: sgl:SG1681 phage lysozyme lysis protein; PFAM: glycoside hydrolase family 24; lysozyme 558996 10216100 Rahaq_4985 Rahnella sp. Y9602 lysozyme YP_004215687.1 558466 D 741091 CDS YP_004215688.1 322835662 10216101 558989..559522 1 NC_015062.1 KEGG: spe:Spro_4928 hypothetical protein; hypothetical protein 559522 10216101 Rahaq_4986 Rahnella sp. Y9602 hypothetical protein YP_004215688.1 558989 D 741091 CDS YP_004215689.1 322835663 10216102 559519..559761 1 NC_015062.1 KEGG: mno:Mnod_6525 hypothetical protein; hypothetical protein 559761 10216102 Rahaq_4987 Rahnella sp. Y9602 hypothetical protein YP_004215689.1 559519 D 741091 CDS YP_004215690.1 322835664 10216103 559758..560315 1 NC_015062.1 KEGG: enc:ECL_03092 hypothetical protein; PFAM: Ig domain protein group 1 domain protein; SMART: Ig domain protein group 1 domain protein; Ig domain-containing protein group 1 domain-containing protein 560315 10216103 Rahaq_4988 Rahnella sp. Y9602 Ig domain-containing protein group 1 domain-containing protein YP_004215690.1 559758 D 741091 CDS YP_004215691.1 322835665 10216104 560384..560566 1 NC_015062.1 KEGG: sty:STY2042 hypothetical protein; hypothetical protein 560566 10216104 Rahaq_4989 Rahnella sp. Y9602 hypothetical protein YP_004215691.1 560384 D 741091 CDS YP_004215692.1 322835666 10216105 560581..561366 1 NC_015062.1 KEGG: ssn:SSON_0735 bacteriophage protein; bacteriophage protein 561366 10216105 Rahaq_4990 Rahnella sp. Y9602 bacteriophage protein YP_004215692.1 560581 D 741091 CDS YP_004215693.1 322835667 10216106 561573..563192 1 NC_015062.1 PFAM: terminase large subunit; KEGG: see:SNSL254_A1154 GP33 TerL; terminase large subunit 563192 10216106 Rahaq_4991 Rahnella sp. Y9602 terminase large subunit YP_004215693.1 561573 D 741091 CDS YP_004215694.1 322835668 10216107 563192..564643 1 NC_015062.1 TIGRFAM: phage-associated protein, HI1409 family; KEGG: ecr:ECIAI1_2646 hypothetical protein; CRISPR-associated protein 564643 10216107 Rahaq_4992 Rahnella sp. Y9602 CRISPR-associated protein YP_004215694.1 563192 D 741091 CDS YP_004215695.1 322835669 10216108 564660..565253 1 NC_015062.1 KEGG: ecg:E2348C_2511 predicted head morphogenesis protein; TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; PFAM: head morphogenesis protein SPP1 gp7; phage head morphogenesis protein 565253 10216108 Rahaq_4993 Rahnella sp. Y9602 phage head morphogenesis protein YP_004215695.1 564660 D 741091 CDS YP_004215696.1 322835670 10216109 565303..566508 1 NC_015062.1 PFAM: Protein of unknown function DUF2213; KEGG: see:SNSL254_A1157 hypothetical protein; hypothetical protein 566508 10216109 Rahaq_4994 Rahnella sp. Y9602 hypothetical protein YP_004215696.1 565303 D 741091 CDS YP_004215697.1 322835671 10216110 566515..566994 1 NC_015062.1 KEGG: see:SNSL254_A1158 bacteriophage protein; bacteriophage protein 566994 10216110 Rahaq_4995 Rahnella sp. Y9602 bacteriophage protein YP_004215697.1 566515 D 741091 CDS YP_004215698.1 322835672 10216111 567007..567951 1 NC_015062.1 PFAM: Protein of unknown function DUF2184; KEGG: eok:G2583_3116 bacteriophage protein; hypothetical protein 567951 10216111 Rahaq_4996 Rahnella sp. Y9602 hypothetical protein YP_004215698.1 567007 D 741091 CDS YP_004215699.1 322835673 10216112 568015..568374 1 NC_015062.1 KEGG: see:SNSL254_A1160 bacteriophage protein; hypothetical protein 568374 10216112 Rahaq_4997 Rahnella sp. Y9602 hypothetical protein YP_004215699.1 568015 D 741091 CDS YP_004215700.1 322835674 10216113 568340..568756 1 NC_015062.1 KEGG: eoh:ECO103_3108 hypothetical protein; hypothetical protein 568756 10216113 Rahaq_4998 Rahnella sp. Y9602 hypothetical protein YP_004215700.1 568340 D 741091 CDS YP_004215701.1 322835675 10216114 568756..569385 1 NC_015062.1 KEGG: spq:SPAB_02229 hypothetical protein; hypothetical protein 569385 10216114 Rahaq_4999 Rahnella sp. Y9602 hypothetical protein YP_004215701.1 568756 D 741091 CDS YP_004215702.1 322835676 10216115 569372..569758 1 NC_015062.1 KEGG: ecg:E2348C_2504 hypothetical protein; hypothetical protein 569758 10216115 Rahaq_5000 Rahnella sp. Y9602 hypothetical protein YP_004215702.1 569372 D 741091 CDS YP_004215703.1 322835677 10216116 569751..570296 1 NC_015062.1 KEGG: ent:Ent638_0805 bacteriophage protein; bacteriophage protein 570296 10216116 Rahaq_5001 Rahnella sp. Y9602 bacteriophage protein YP_004215703.1 569751 D 741091 CDS YP_004215704.1 322835678 10216117 570302..571444 1 NC_015062.1 KEGG: spq:SPAB_02226 hypothetical protein; hypothetical protein 571444 10216117 Rahaq_5002 Rahnella sp. Y9602 hypothetical protein YP_004215704.1 570302 D 741091 CDS YP_004215705.1 322835679 10216118 571454..571894 1 NC_015062.1 KEGG: spq:SPAB_02225 hypothetical protein; hypothetical protein 571894 10216118 Rahaq_5003 Rahnella sp. Y9602 hypothetical protein YP_004215705.1 571454 D 741091 CDS YP_004215706.1 322835680 10216119 571898..572326 1 NC_015062.1 KEGG: spq:SPAB_02224 hypothetical protein; hypothetical protein 572326 10216119 Rahaq_5004 Rahnella sp. Y9602 hypothetical protein YP_004215706.1 571898 D 741091 CDS YP_004215707.1 322835681 10216120 572504..574438 1 NC_015062.1 PFAM: Lytic transglycosylase catalytic; KEGG: see:SNSL254_A1168 lytic transglycosylase, catalytic; lytic transglycosylase 574438 10216120 Rahaq_5005 Rahnella sp. Y9602 lytic transglycosylase YP_004215707.1 572504 D 741091 CDS YP_004215708.1 322835682 10216121 574438..575037 1 NC_015062.1 KEGG: stt:t1879 bacteriophage protein; bacteriophage protein 575037 10216121 Rahaq_5006 Rahnella sp. Y9602 bacteriophage protein YP_004215708.1 574438 D 741091 CDS YP_004215709.1 322835683 10216122 575038..575346 1 NC_015062.1 KEGG: see:SNSL254_A1170 bacteriophage protein; bacteriophage protein 575346 10216122 Rahaq_5007 Rahnella sp. Y9602 bacteriophage protein YP_004215709.1 575038 D 741091 CDS YP_004215710.1 322835684 10216123 575346..576371 1 NC_015062.1 KEGG: sec:SC2593 bacteriophage protein; bacteriophage protein 576371 10216123 Rahaq_5008 Rahnella sp. Y9602 bacteriophage protein YP_004215710.1 575346 D 741091 CDS YP_004215711.1 322835685 10216124 576371..576712 1 NC_015062.1 KEGG: sec:SC2592 hypothetical protein; hypothetical protein 576712 10216124 Rahaq_5009 Rahnella sp. Y9602 hypothetical protein YP_004215711.1 576371 D 741091 CDS YP_004215712.1 322835686 10216125 576740..577126 1 NC_015062.1 KEGG: rme:Rmet_5469 hypothetical protein; hypothetical protein 577126 10216125 Rahaq_5010 Rahnella sp. Y9602 hypothetical protein YP_004215712.1 576740 D 741091 CDS YP_004215713.1 322835687 10216126 577199..577951 1 NC_015062.1 KEGG: spq:SPAB_02215 hypothetical protein; hypothetical protein 577951 10216126 Rahaq_5011 Rahnella sp. Y9602 hypothetical protein YP_004215713.1 577199 D 741091 CDS YP_004215714.1 322835688 10216127 577953..578306 1 NC_015062.1 KEGG: sty:STY1069 bacteriophage protein; bacteriophage protein 578306 10216127 Rahaq_5012 Rahnella sp. Y9602 bacteriophage protein YP_004215714.1 577953 D 741091 CDS YP_004215715.1 322835689 10216128 578306..579505 1 NC_015062.1 KEGG: sty:STY1070 bacteriophage protein; bacteriophage protein 579505 10216128 Rahaq_5013 Rahnella sp. Y9602 bacteriophage protein YP_004215715.1 578306 D 741091 CDS YP_004215716.1 322835690 10216129 579502..580272 1 NC_015062.1 KEGG: stt:t1869 bacteriophage protein; bacteriophage protein 580272 10216129 Rahaq_5014 Rahnella sp. Y9602 bacteriophage protein YP_004215716.1 579502 D 741091 CDS YP_004215717.1 322835691 10216130 580319..582697 1 NC_015062.1 KEGG: bcj:BCAL1560 hypothetical protein; hypothetical protein 582697 10216130 Rahaq_5015 Rahnella sp. Y9602 hypothetical protein YP_004215717.1 580319 D 741091 CDS YP_004215718.1 322835692 10216131 582709..583461 1 NC_015062.1 KEGG: syr:SynRCC307_0619 Hep_Hag repeat-containing outer membrane protein; hypothetical protein 583461 10216131 Rahaq_5016 Rahnella sp. Y9602 hypothetical protein YP_004215718.1 582709 D 741091 CDS YP_004215719.1 322835693 10216132 583552..584271 1 NC_015062.1 KEGG: bvi:Bcep1808_4560 hypothetical protein; hypothetical protein 584271 10216132 Rahaq_5017 Rahnella sp. Y9602 hypothetical protein YP_004215719.1 583552 D 741091 CDS YP_004215720.1 322835694 10216133 584283..584702 1 NC_015062.1 PFAM: tail assembly chaperone gp38; KEGG: sfv:SFV_0255 phage tail fibre protein; tail assembly chaperone gp38 584702 10216133 Rahaq_5018 Rahnella sp. Y9602 tail assembly chaperone gp38 YP_004215720.1 584283 D 741091 CDS YP_004215721.1 322835695 10216134 complement(584876..585511) 1 NC_015062.1 KEGG: spe:Spro_2529 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 585511 10216134 Rahaq_5019 Rahnella sp. Y9602 ABC transporter YP_004215721.1 584876 R 741091 CDS YP_004215722.1 322835696 10216135 complement(585863..587101) 1 NC_015062.1 PFAM: major facilitator superfamily MFS_1; KEGG: ebi:EbC_28800 major facilitator superfamily; major facilitator superfamily protein 587101 10216135 Rahaq_5020 Rahnella sp. Y9602 major facilitator superfamily protein YP_004215722.1 585863 R 741091 CDS YP_004215723.1 322835697 10216136 complement(587240..588163) 1 NC_015062.1 PFAM: alpha/beta hydrolase fold; KEGG: ebi:EbC_25500 hydrolase; alpha/beta hydrolase fold protein 588163 10216136 Rahaq_5021 Rahnella sp. Y9602 alpha/beta hydrolase fold protein YP_004215723.1 587240 R 741091 CDS YP_004215724.1 322835698 10216137 complement(588224..588841) 1 NC_015062.1 PFAM: regulatory protein TetR; KEGG: ebi:EbC_25490 transcriptional regulator; TetR family transcriptional regulator 588841 10216137 Rahaq_5022 Rahnella sp. Y9602 TetR family transcriptional regulator YP_004215724.1 588224 R 741091 CDS YP_004215725.1 322835699 10216138 complement(588915..589592) 1 NC_015062.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebi:EbC_22310 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 589592 10216138 Rahaq_5023 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004215725.1 588915 R 741091 CDS YP_004215726.1 322835700 10216139 589701..589796 1 NC_015062.1 hypothetical protein 589796 10216139 Rahaq_5024 Rahnella sp. Y9602 hypothetical protein YP_004215726.1 589701 D 741091 CDS YP_004215727.1 322835701 10216140 590331..590531 1 NC_015062.1 KEGG: ent:Ent638_4271 hypothetical protein; hypothetical protein 590531 10216140 Rahaq_5025 Rahnella sp. Y9602 hypothetical protein YP_004215727.1 590331 D 741091 CDS YP_004215728.1 322835702 10216141 591148..591921 1 NC_015062.1 KEGG: dda:Dd703_2719 hypothetical protein; hypothetical protein 591921 10216141 Rahaq_5026 Rahnella sp. Y9602 hypothetical protein YP_004215728.1 591148 D 741091 CDS YP_004215729.1 322835703 10216142 complement(591968..593653) 1 NC_015062.1 PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: yen:YE2794 malate dehydrogenase; malic protein NAD-binding protein 593653 10216142 Rahaq_5027 Rahnella sp. Y9602 malic protein NAD-binding protein YP_004215729.1 591968 R 741091 CDS YP_004215730.1 322835704 10216143 594149..595093 1 NC_015062.1 PFAM: Auxin Efflux Carrier; KEGG: kva:Kvar_1738 auxin efflux carrier; hypothetical protein 595093 10216143 Rahaq_5028 Rahnella sp. Y9602 hypothetical protein YP_004215730.1 594149 D 741091 CDS YP_004215731.1 322835705 10216144 complement(595170..596816) 1 NC_015062.1 KEGG: enc:ECL_02274 fumarase; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit beta 596816 10216144 Rahaq_5029 Rahnella sp. Y9602 Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit beta YP_004215731.1 595170 R 741091 CDS YP_004215732.1 322835706 10216145 complement(597007..598518) 1 NC_015062.1 KEGG: enc:ECL_03251 anion transporter; TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; anion transporter 598518 10216145 Rahaq_5030 Rahnella sp. Y9602 anion transporter YP_004215732.1 597007 R 741091 CDS YP_004215733.1 322835707 10216146 599258..602035 1 NC_015062.1 KEGG: dze:Dd1591_3495 flavocytochrome c; TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; NADH:flavin oxidoreductase/NADH oxidase; FMN-binding domain protein; flavocytochrome c 602035 10216146 Rahaq_5031 Rahnella sp. Y9602 flavocytochrome c YP_004215733.1 599258 D 741091 CDS YP_004215734.1 322835708 10216147 602060..603022 1 NC_015062.1 PFAM: ApbE family lipoprotein; KEGG: ebi:EbC_17560 thiamine biosynthesis protein; ApbE family lipoprotein 603022 10216147 Rahaq_5032 Rahnella sp. Y9602 ApbE family lipoprotein YP_004215734.1 602060 D 741091 CDS YP_004215735.1 322835709 10216148 complement(603016..603735) 1 NC_015062.1 KEGG: pam:PANA_4115 DcuR; PFAM: response regulator receiver; SMART: response regulator receiver; fused response regulator receiver/hypothetical protein 603735 10216148 Rahaq_5033 Rahnella sp. Y9602 fused response regulator receiver/hypothetical protein YP_004215735.1 603016 R 741091 CDS YP_004215736.1 322835710 10216149 complement(603732..605351) 1 NC_015062.1 KEGG: ebi:EbC_17580 response regulator in two-component regulatory system with DcuR; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; signal transduction histidine kinase regulating citrate/malate metabolism 605351 10216149 Rahaq_5034 Rahnella sp. Y9602 signal transduction histidine kinase regulating citrate/malate metabolism YP_004215736.1 603732 R 741091 CDS YP_004215737.1 322835711 10216150 complement(605590..605907) 1 NC_015062.1 KEGG: esa:ESA_01130 hypothetical protein; hypothetical protein 605907 10216150 Rahaq_5035 Rahnella sp. Y9602 hypothetical protein YP_004215737.1 605590 R 741091 CDS YP_004215738.1 322835712 10216151 606237..607142 1 NC_015062.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebi:EbC_12850 short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 607142 10216151 Rahaq_5036 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004215738.1 606237 D 741091 CDS YP_004215739.1 322835713 10216152 607457..607678 1 NC_015062.1 KEGG: oaa:100078598 similar to pheromone receptor V2R1b; hypothetical protein 607678 10216152 Rahaq_5037 Rahnella sp. Y9602 hypothetical protein YP_004215739.1 607457 D 741091 CDS YP_004215740.1 322835714 10216153 complement(607627..607782) 1 NC_015062.1 hypothetical protein 607782 10216153 Rahaq_5038 Rahnella sp. Y9602 hypothetical protein YP_004215740.1 607627 R 741091 CDS YP_004215741.1 322835715 10216154 complement(607884..608792) 1 NC_015062.1 PFAM: sugar isomerase (SIS); KEGG: cko:CKO_02841 hypothetical protein; RpiR family transcriptional regulator 608792 10216154 Rahaq_5039 Rahnella sp. Y9602 RpiR family transcriptional regulator YP_004215741.1 607884 R 741091 CDS YP_004215742.1 322835716 10216155 609079..611265 1 NC_015062.1 KEGG: pam:PANA_4210 FoxA; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; TonB-dependent siderophore receptor 611265 10216155 Rahaq_5040 Rahnella sp. Y9602 TonB-dependent siderophore receptor YP_004215742.1 609079 D 741091 CDS YP_004215743.1 322835717 10216156 611303..612394 1 NC_015062.1 KEGG: pam:PANA_4209 YadT; Fe3+-hydroxamate ABC transporter periplasmic protein 612394 10216156 Rahaq_5041 Rahnella sp. Y9602 Fe3+-hydroxamate ABC transporter periplasmic protein YP_004215743.1 611303 D 741091 CDS YP_004215744.1 322835718 10216157 612658..614211 1 NC_015062.1 KEGG: cro:ROD_03881 peptide transport protein; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; amino acid/peptide transporter 614211 10216157 Rahaq_5042 Rahnella sp. Y9602 amino acid/peptide transporter YP_004215744.1 612658 D 741091 CDS YP_004215745.1 322835719 10216158 complement(614283..614714) 1 NC_015062.1 TIGRFAM: arsenate reductase; KEGG: ect:ECIAI39_3995 arsenate reductase; PFAM: arsenate reductase and related; arsenate reductase 614714 10216158 Rahaq_5043 Rahnella sp. Y9602 arsenate reductase YP_004215745.1 614283 R 741091 CDS YP_004215746.1 322835720 10216159 complement(614766..616055) 1 NC_015062.1 KEGG: ypy:YPK_3416 arsenical pump membrane protein; TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; arsenical pump membrane protein 616055 10216159 Rahaq_5044 Rahnella sp. Y9602 arsenical pump membrane protein YP_004215746.1 614766 R 741091 CDS YP_004215747.1 322835721 10216160 complement(616100..616420) 1 NC_015062.1 KEGG: enc:ECL_02869 arsenic-efflux pump regulatory protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; ArsR family transcriptional regulator 616420 10216160 Rahaq_5045 Rahnella sp. Y9602 ArsR family transcriptional regulator YP_004215747.1 616100 R 741091 CDS YP_004215748.1 322836371 10216304 550..1656 1 NC_015063.1 PFAM: hypothetical protein; KEGG: rru:Rru_A0500 extracellular solute-binding protein; hypothetical protein 1656 10216304 Rahaq_5046 Rahnella sp. Y9602 hypothetical protein YP_004215748.1 550 D 741091 CDS YP_004215749.1 322836372 10216166 1640..2590 1 NC_015063.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_2135 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2590 10216166 Rahaq_5047 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004215749.1 1640 D 741091 CDS YP_004215750.1 322836373 10216167 2587..3381 1 NC_015063.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pde:Pden_0831 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3381 10216167 Rahaq_5048 Rahnella sp. Y9602 binding-protein-dependent transport system inner membrane protein YP_004215750.1 2587 D 741091 CDS YP_004215751.1 322836374 10216168 3378..4469 1 NC_015063.1 KEGG: mlo:mll3065 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter 4469 10216168 Rahaq_5049 Rahnella sp. Y9602 ABC transporter YP_004215751.1 3378 D 741091 CDS YP_004215752.1 322836375 10216169 4541..4687 1 NC_015063.1 hypothetical protein 4687 10216169 Rahaq_5050 Rahnella sp. Y9602 hypothetical protein YP_004215752.1 4541 D 741091 CDS YP_004215753.1 322836376 10216290 complement(5858..6973) 1 NC_015063.1 TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: cvi:CV_0556 N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; N-acetylglucosamine-6-phosphate deacetylase 6973 10216290 Rahaq_5052 Rahnella sp. Y9602 N-acetylglucosamine-6-phosphate deacetylase YP_004215753.1 5858 R 741091 CDS YP_004215754.1 322836377 10216171 7067..7936 1 NC_015063.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bvi:Bcep1808_5096 LysR family transcriptional regulator; LysR family transcriptional regulator 7936 10216171 Rahaq_5053 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004215754.1 7067 D 741091 CDS YP_004215755.1 322836378 10216172 complement(8197..8940) 1 NC_015063.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: bcm:Bcenmc03_2497 NADP oxidoreductase coenzyme F420-dependent; coenzyme F420-dependent NADP oxidoreductase 8940 10216172 Rahaq_5054 Rahnella sp. Y9602 coenzyme F420-dependent NADP oxidoreductase YP_004215755.1 8197 R 741091 CDS YP_004215756.1 322836379 10216173 complement(9123..9881) 1 NC_015063.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: vap:Vapar_1647 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 9881 10216173 Rahaq_5055 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004215756.1 9123 R 741091 CDS YP_004215757.1 322836380 10216174 9999..10595 1 NC_015063.1 PFAM: regulatory protein TetR; KEGG: bcm:Bcenmc03_2496 TetR family transcriptional regulator; TetR family transcriptional regulator 10595 10216174 Rahaq_5056 Rahnella sp. Y9602 TetR family transcriptional regulator YP_004215757.1 9999 D 741091 CDS YP_004215758.1 322836381 10216175 complement(10729..10875) 1 NC_015063.1 hypothetical protein 10875 10216175 Rahaq_5057 Rahnella sp. Y9602 hypothetical protein YP_004215758.1 10729 R 741091 CDS YP_004215759.1 322836382 10216176 complement(11817..12218) 1 NC_015063.1 SMART: helix-turn-helix domain protein; KEGG: ebd:ECBD_0718 transcriptional regulator, XRE family; hypothetical protein 12218 10216176 Rahaq_5058 Rahnella sp. Y9602 hypothetical protein YP_004215759.1 11817 R 741091 CDS YP_004215760.1 322836383 10216177 complement(12220..12516) 1 NC_015063.1 KEGG: ebd:ECBD_0717 hypothetical protein; hypothetical protein 12516 10216177 Rahaq_5059 Rahnella sp. Y9602 hypothetical protein YP_004215760.1 12220 R 741091 CDS YP_004215761.1 322836384 10216178 complement(12611..13069) 1 NC_015063.1 KEGG: xtr:100151729 homeobox A3; hypothetical protein 13069 10216178 Rahaq_5060 Rahnella sp. Y9602 hypothetical protein YP_004215761.1 12611 R 741091 CDS YP_004215762.1 322836385 10216179 complement(13066..13371) 1 NC_015063.1 KEGG: cim:CIMG_05876 hypothetical protein; hypothetical protein 13371 10216179 Rahaq_5061 Rahnella sp. Y9602 hypothetical protein YP_004215762.1 13066 R 741091 CDS YP_004215763.1 322836386 10216180 complement(13374..13616) 1 NC_015063.1 PFAM: protein of unknown function DUF905; KEGG: kpn:KPN_pKPN4p07110 hypothetical protein; hypothetical protein 13616 10216180 Rahaq_5062 Rahnella sp. Y9602 hypothetical protein YP_004215763.1 13374 R 741091 CDS YP_004215764.1 322836387 10216181 complement(14446..14646) 1 NC_015063.1 KEGG: sec:SC124 hypothetical protein; hypothetical protein 14646 10216181 Rahaq_5063 Rahnella sp. Y9602 hypothetical protein YP_004215764.1 14446 R 741091 CDS YP_004215765.1 322836388 10216182 complement(14688..15188) 1 NC_015063.1 PFAM: antirestriction ArdA family protein; KEGG: kpn:KPN_pKPN5p08170 putative antirestriction protein; antirestriction ArdA family protein 15188 10216182 Rahaq_5064 Rahnella sp. Y9602 antirestriction ArdA family protein YP_004215765.1 14688 R 741091 CDS YP_004215766.1 322836389 10216183 complement(15596..16066) 1 NC_015063.1 KEGG: stm:PSLT056 hypothetical protein; hypothetical protein 16066 10216183 Rahaq_5065 Rahnella sp. Y9602 hypothetical protein YP_004215766.1 15596 R 741091 CDS YP_004215767.1 322836390 10216184 complement(16431..16652) 1 NC_015063.1 KEGG: etw:ECSP_6045 hypothetical protein; hypothetical protein 16652 10216184 Rahaq_5066 Rahnella sp. Y9602 hypothetical protein YP_004215767.1 16431 R 741091 CDS YP_004215768.1 322836391 10216185 complement(16681..17325) 1 NC_015063.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: enc:ECL_A075 DNA methylase family protein; DNA methylase N-4/N-6 domain-containing protein 17325 10216185 Rahaq_5067 Rahnella sp. Y9602 DNA methylase N-4/N-6 domain-containing protein YP_004215768.1 16681 R 741091 CDS YP_004215769.1 322836392 10216186 17609..17830 1 NC_015063.1 KEGG: ang:An01g08210 hypothetical protein; hypothetical protein 17830 10216186 Rahaq_5068 Rahnella sp. Y9602 hypothetical protein YP_004215769.1 17609 D 741091 CDS YP_004215770.1 322836393 10216187 complement(17866..18099) 1 NC_015063.1 KEGG: ssc:396960 albumin; hypothetical protein 18099 10216187 Rahaq_5069 Rahnella sp. Y9602 hypothetical protein YP_004215770.1 17866 R 741091 CDS YP_004215771.1 322836394 10216188 complement(18636..19640) 1 NC_015063.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ddd:Dda3937_00500 ISEch4 transposase; transposase IS116/IS110/IS902 family protein 19640 10216188 Rahaq_5070 Rahnella sp. Y9602 transposase IS116/IS110/IS902 family protein YP_004215771.1 18636 R 741091 CDS YP_004215772.1 322836395 10216189 complement(19749..19982) 1 NC_015063.1 KEGG: ebi:EbC_pEb17201520 hypothetical protein; hypothetical protein 19982 10216189 Rahaq_5071 Rahnella sp. Y9602 hypothetical protein YP_004215772.1 19749 R 741091 CDS YP_004215773.1 322836396 10216190 complement(20020..20415) 1 NC_015063.1 PFAM: Plasmid stability protein, StbB; KEGG: eay:EAM_P218 plasmid stability protein; plasmid stability protein StbB 20415 10216190 Rahaq_5072 Rahnella sp. Y9602 plasmid stability protein StbB YP_004215773.1 20020 R 741091 CDS YP_004215774.1 322836397 10216291 complement(21381..22346) 1 NC_015063.1 TIGRFAM: parB-like partition protein; PFAM: ParB family protein; ParB domain protein nuclease; KEGG: esa:ESA_pESA3p05553 hypothetical protein; SMART: ParB domain protein nuclease; parB-like partition protein 22346 10216291 Rahaq_5074 Rahnella sp. Y9602 parB-like partition protein YP_004215774.1 21381 R 741091 CDS YP_004215775.1 322836398 10216192 complement(22355..23554) 1 NC_015063.1 KEGG: ctu:Ctu_1p01110 plasmid partition protein A; plasmid partition protein A 23554 10216192 Rahaq_5075 Rahnella sp. Y9602 plasmid partition protein A YP_004215775.1 22355 R 741091 CDS YP_004215776.1 322836399 10216193 complement(23884..24144) 1 NC_015063.1 KEGG: pfo:Pfl01_4635 addiction module toxin, Txe/YoeB; TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Addiction module toxin Txe/YoeB; Txe/YoeB family addiction module toxin 24144 10216193 Rahaq_5076 Rahnella sp. Y9602 Txe/YoeB family addiction module toxin YP_004215776.1 23884 R 741091 CDS YP_004215777.1 322836400 10216194 complement(24141..24386) 1 NC_015063.1 TIGRFAM: prevent-host-death family protein; KEGG: etr:ETAE_1621 prevent-host-death protein; prevent-host-death family protein 24386 10216194 Rahaq_5077 Rahnella sp. Y9602 prevent-host-death family protein YP_004215777.1 24141 R 741091 CDS YP_004215778.1 322836401 10216195 complement(24801..25808) 1 NC_015063.1 PFAM: initiator RepB protein; KEGG: yps:pYptb0001 plasmid replication protein; initiator RepB protein 25808 10216195 Rahaq_5078 Rahnella sp. Y9602 initiator RepB protein YP_004215778.1 24801 R 741091 CDS YP_004215779.1 322836402 10216196 26737..27372 1 NC_015063.1 PFAM: LexA DNA-binding domain protein; KEGG: sgl:SG0619 hypothetical protein; LexA family transcriptional regulator 27372 10216196 Rahaq_5079 Rahnella sp. Y9602 LexA family transcriptional regulator YP_004215779.1 26737 D 741091 CDS YP_004215780.1 322836403 10216197 27366..27626 1 NC_015063.1 KEGG: hde:HDEF_1039 hypothetical protein; hypothetical protein 27626 10216197 Rahaq_5080 Rahnella sp. Y9602 hypothetical protein YP_004215780.1 27366 D 741091 CDS YP_004215781.1 322836404 10216198 complement(27841..28632) 1 NC_015063.1 PFAM: integrase; KEGG: ecv:APECO1_O1CoBM116 resolvase; integrase 28632 10216198 Rahaq_5081 Rahnella sp. Y9602 integrase YP_004215781.1 27841 R 741091 CDS YP_004215782.1 322836405 10216199 complement(29183..29968) 1 NC_015063.1 KEGG: ebi:EbC_17740 transcriptional regulatory protein; hypothetical protein 29968 10216199 Rahaq_5082 Rahnella sp. Y9602 hypothetical protein YP_004215782.1 29183 R 741091 CDS YP_004215783.1 322836406 10216292 30774..31391 1 NC_015063.1 PFAM: Fimbrial protein domain-containing protein; KEGG: ebi:EbC_11310 fimbrial major subunit; fimbrial protein 31391 10216292 Rahaq_5084 Rahnella sp. Y9602 fimbrial protein YP_004215783.1 30774 D 741091 CDS YP_004215784.1 322836407 10216201 31472..32173 1 NC_015063.1 PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: eta:ETA_33020 fimbrial chaperone protein; pili assembly chaperone 32173 10216201 Rahaq_5085 Rahnella sp. Y9602 pili assembly chaperone YP_004215784.1 31472 D 741091 CDS YP_004215785.1 322836408 10216202 32222..34879 1 NC_015063.1 KEGG: ebi:EbC_11330 outer membrane usher protein, fimbrial-like; manually curated; PFAM: fimbrial biogenesis outer membrane usher protein; fimbrial biogenesis outer membrane usher protein 34879 10216202 Rahaq_5086 Rahnella sp. Y9602 fimbrial biogenesis outer membrane usher protein YP_004215785.1 32222 D 741091 CDS YP_004215786.1 322836409 10216203 34964..35500 1 NC_015063.1 PFAM: Fimbrial protein domain-containing protein; KEGG: ebi:EbC_11340 putative fimbrial subunit BcfE; fimbrial protein domain-containing protein 35500 10216203 Rahaq_5087 Rahnella sp. Y9602 fimbrial protein domain-containing protein YP_004215786.1 34964 D 741091 CDS YP_004215787.1 322836410 10216204 35526..36080 1 NC_015063.1 PFAM: Fimbrial protein domain-containing protein; KEGG: ebi:EbC_11340 putative fimbrial subunit BcfE; fimbrial protein domain-containing protein 36080 10216204 Rahaq_5088 Rahnella sp. Y9602 fimbrial protein domain-containing protein YP_004215787.1 35526 D 741091 CDS YP_004215788.1 322836411 10216205 36178..36963 1 NC_015063.1 KEGG: ebi:EbC_11350 hypothetical protein; hypothetical protein 36963 10216205 Rahaq_5089 Rahnella sp. Y9602 hypothetical protein YP_004215788.1 36178 D 741091 CDS YP_004215789.1 322836412 10216206 38057..40657 1 NC_015063.1 KEGG: ent:Ent638_4206 outer membrane autotransporter; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; Pertactin; outer membrane autotransporter barrel domain-containing protein 40657 10216206 Rahaq_5090 Rahnella sp. Y9602 outer membrane autotransporter barrel domain-containing protein YP_004215789.1 38057 D 741091 CDS YP_004215790.1 322836413 10216207 40770..41150 1 NC_015063.1 KEGG: rpd:RPD_4117 ATP phosphoribosyltransferase regulatory subunit; hypothetical protein 41150 10216207 Rahaq_5091 Rahnella sp. Y9602 hypothetical protein YP_004215790.1 40770 D 741091 CDS YP_004215791.1 322836414 10216208 41147..41455 1 NC_015063.1 KEGG: cfa:609459 similar to Rho GTPase activating protein 20; hypothetical protein 41455 10216208 Rahaq_5092 Rahnella sp. Y9602 hypothetical protein YP_004215791.1 41147 D 741091 CDS YP_004215792.1 322836415 10216293 41813..42217 1 NC_015063.1 KEGG: ebi:EbC_35160 hypothetical protein; hypothetical protein 42217 10216293 Rahaq_5094 Rahnella sp. Y9602 hypothetical protein YP_004215792.1 41813 D 741091 CDS YP_004215793.1 322836416 10216210 42468..43295 1 NC_015063.1 PFAM: transcriptional regulator domain-containing protein; KEGG: ebi:EbC_17740 transcriptional regulatory protein; CadC family transcriptional regulator 43295 10216210 Rahaq_5095 Rahnella sp. Y9602 CadC family transcriptional regulator YP_004215793.1 42468 D 741091 CDS YP_004215794.1 322836417 10216211 43288..43773 1 NC_015063.1 manually curated; KEGG: ebi:EbC_17730 hypothetical protein; hypothetical protein 43773 10216211 Rahaq_5096 Rahnella sp. Y9602 hypothetical protein YP_004215794.1 43288 D 741091 CDS YP_004215795.1 322836418 10216212 44700..44936 1 NC_015063.1 PFAM: hypothetical protein; KEGG: ebi:EbC_44280 putative lipoprotein; hypothetical protein 44936 10216212 Rahaq_5097 Rahnella sp. Y9602 hypothetical protein YP_004215795.1 44700 D 741091 CDS YP_004215796.1 322836419 10216213 45125..45427 1 NC_015063.1 KEGG: ebi:EbC_44290 hypothetical protein; hypothetical protein 45427 10216213 Rahaq_5098 Rahnella sp. Y9602 hypothetical protein YP_004215796.1 45125 D 741091 CDS YP_004215797.1 322836420 10216214 45647..46027 1 NC_015063.1 KEGG: xne:XNC1_1132 conserved hypothetical protein; putative exported protein; hypothetical protein 46027 10216214 Rahaq_5099 Rahnella sp. Y9602 hypothetical protein YP_004215797.1 45647 D 741091 CDS YP_004215798.1 322836421 10216295 47512..50913 1 NC_015063.1 KEGG: eta:ETA_05480 hypothetical protein; hypothetical protein 50913 10216295 Rahaq_5102 Rahnella sp. Y9602 hypothetical protein YP_004215798.1 47512 D 741091 CDS YP_004215799.1 322836422 10216217 56384..56494 1 NC_015063.1 hypothetical protein 56494 10216217 Rahaq_5106 Rahnella sp. Y9602 hypothetical protein YP_004215799.1 56384 D 741091 CDS YP_004215800.1 322836423 10216218 56518..57738 1 NC_015063.1 KEGG: eta:ETA_05470 similar to nematicidal protein 2; nematicidal protein 2-like protein 57738 10216218 Rahaq_5107 Rahnella sp. Y9602 nematicidal protein 2-like protein YP_004215800.1 56518 D 741091 CDS YP_004215801.1 322836424 10216219 58303..58614 1 NC_015063.1 PFAM: transposase IS3/IS911 family protein; KEGG: ebi:EbC_27880 transposase OrfAB, subunit A; transposase IS3/IS911 family protein 58614 10216219 Rahaq_5108 Rahnella sp. Y9602 transposase IS3/IS911 family protein YP_004215801.1 58303 D 741091 CDS YP_004215802.1 322836425 10216220 58650..59477 1 NC_015063.1 KEGG: ebi:EbC_44320 transposase; manually curated; PFAM: Integrase catalytic region; integrase 59477 10216220 Rahaq_5109 Rahnella sp. Y9602 integrase YP_004215802.1 58650 D 741091 CDS YP_004215803.1 322836426 10216221 59474..60811 1 NC_015063.1 KEGG: ecv:APECO1_O1CoBM79 hypothetical protein; hypothetical protein 60811 10216221 Rahaq_5110 Rahnella sp. Y9602 hypothetical protein YP_004215803.1 59474 D 741091 CDS YP_004215804.1 322836427 10216222 60796..61833 1 NC_015063.1 KEGG: ecv:APECO1_O1CoBM78 hypothetical protein; hypothetical protein 61833 10216222 Rahaq_5111 Rahnella sp. Y9602 hypothetical protein YP_004215804.1 60796 D 741091 CDS YP_004215805.1 322836428 10216223 61999..62103 1 NC_015063.1 KEGG: eic:NT01EI_0264 hypothetical protein; hypothetical protein 62103 10216223 Rahaq_5112 Rahnella sp. Y9602 hypothetical protein YP_004215805.1 61999 D 741091 CDS YP_004215806.1 322836429 10216224 62296..63072 1 NC_015063.1 KEGG: sty:HCM2.0029c hypothetical protein; hypothetical protein 63072 10216224 Rahaq_5113 Rahnella sp. Y9602 hypothetical protein YP_004215806.1 62296 D 741091 CDS YP_004215807.1 322836430 10216225 63383..64336 1 NC_015063.1 KEGG: cro:ROD_p1471 hypothetical protein; hypothetical protein 64336 10216225 Rahaq_5114 Rahnella sp. Y9602 hypothetical protein YP_004215807.1 63383 D 741091 CDS YP_004215808.1 322836431 10216226 complement(64419..65192) 1 NC_015063.1 PFAM: integrase; KEGG: enc:ECL_B094 putative resolvase; integrase 65192 10216226 Rahaq_5115 Rahnella sp. Y9602 integrase YP_004215808.1 64419 R 741091 CDS YP_004215809.1 322836432 10216227 65690..67180 1 NC_015063.1 KEGG: bcq:BCQ_1338 hypothetical protein; hypothetical protein 67180 10216227 Rahaq_5116 Rahnella sp. Y9602 hypothetical protein YP_004215809.1 65690 D 741091 CDS YP_004215810.1 322836433 10216228 67305..68018 1 NC_015063.1 manually curated; KEGG: ecc:c0290 hypothetical protein; hypothetical protein 68018 10216228 Rahaq_5117 Rahnella sp. Y9602 hypothetical protein YP_004215810.1 67305 D 741091 CDS YP_004215811.1 322836434 10216229 68471..69226 1 NC_015063.1 KEGG: sty:HCM2.0044c hypothetical protein; hypothetical protein 69226 10216229 Rahaq_5118 Rahnella sp. Y9602 hypothetical protein YP_004215811.1 68471 D 741091 CDS YP_004215812.1 322836435 10216230 69653..71239 1 NC_015063.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: har:HEAR1734 GGDEF domain-containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 71239 10216230 Rahaq_5119 Rahnella sp. Y9602 diguanylate cyclase YP_004215812.1 69653 D 741091 CDS YP_004215813.1 322836436 10216231 complement(71597..73696) 1 NC_015063.1 KEGG: epy:EpC_35530 microcin H47 secretion ATP-binding protein; PFAM: peptidase C39 bacteriocin processing; ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; peptidase C39 bacteriocin processing 73696 10216231 Rahaq_5120 Rahnella sp. Y9602 peptidase C39 bacteriocin processing YP_004215813.1 71597 R 741091 CDS YP_004215814.1 322836437 10216232 complement(73689..74963) 1 NC_015063.1 PFAM: secretion protein HlyD family protein; KEGG: epy:EpC_35520 microcin H47 secretion protein; secretion protein HlyD family protein 74963 10216232 Rahaq_5121 Rahnella sp. Y9602 secretion protein HlyD family protein YP_004215814.1 73689 R 741091 CDS YP_004215815.1 322836438 10216233 75813..76151 1 NC_015063.1 KEGG: cel:T12F5.3 Germ-Line Helicase family member (glh-4); hypothetical protein 76151 10216233 Rahaq_5122 Rahnella sp. Y9602 hypothetical protein YP_004215815.1 75813 D 741091 CDS YP_004215816.1 322836439 10216234 complement(76261..76893) 1 NC_015063.1 PFAM: abortive infection protein; KEGG: kpe:KPK_A0150 putative membrane-bound protease; abortive infection protein 76893 10216234 Rahaq_5123 Rahnella sp. Y9602 abortive infection protein YP_004215816.1 76261 R 741091 CDS YP_004215817.1 322836440 10216235 complement(77688..78470) 1 NC_015063.1 PFAM: integrase; KEGG: efe:pEFER_0057 resolvase (protein D); integrase 78470 10216235 Rahaq_5124 Rahnella sp. Y9602 integrase YP_004215817.1 77688 R 741091 CDS YP_004215818.1 322836441 10216236 complement(78467..79171) 1 NC_015063.1 KEGG: efe:pEFER_0056 hypothetical protein, putative membrane transporter; hypothetical protein 79171 10216236 Rahaq_5125 Rahnella sp. Y9602 hypothetical protein YP_004215818.1 78467 R 741091 CDS YP_004215819.1 322836442 10216237 79446..80441 1 NC_015063.1 KEGG: ctu:Ctu_08830 hypothetical protein; hypothetical protein 80441 10216237 Rahaq_5126 Rahnella sp. Y9602 hypothetical protein YP_004215819.1 79446 D 741091 CDS YP_004215820.1 322836443 10216238 80445..81062 1 NC_015063.1 KEGG: ctu:Ctu_08840 hypothetical protein; hypothetical protein 81062 10216238 Rahaq_5127 Rahnella sp. Y9602 hypothetical protein YP_004215820.1 80445 D 741091 CDS YP_004215821.1 322836444 10216239 complement(81074..81868) 1 NC_015063.1 KEGG: epy:EpC_07540 transposase subunit; manually curated; PFAM: Integrase catalytic region; integrase 81868 10216239 Rahaq_5128 Rahnella sp. Y9602 integrase YP_004215821.1 81074 R 741091 CDS YP_004215822.1 322836445 10216240 complement(81919..82185) 1 NC_015063.1 PFAM: transposase IS3/IS911 family protein; KEGG: ent:Ent638_4321 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 82185 10216240 Rahaq_5129 Rahnella sp. Y9602 transposase IS3/IS911 family protein YP_004215822.1 81919 R 741091 CDS YP_004215823.1 322836446 10216241 82256..82588 1 NC_015063.1 KEGG: ctu:Ctu_08840 hypothetical protein; hypothetical protein 82588 10216241 Rahaq_5130 Rahnella sp. Y9602 hypothetical protein YP_004215823.1 82256 D 741091 CDS YP_004215824.1 322836447 10216242 complement(82962..83939) 1 NC_015063.1 KEGG: ppf:Pput_5029 hypothetical protein; hypothetical protein 83939 10216242 Rahaq_5131 Rahnella sp. Y9602 hypothetical protein YP_004215824.1 82962 R 741091 CDS YP_004215825.1 322836448 10216243 complement(84295..87279) 1 NC_015063.1 PFAM: transposase Tn3 family protein; KEGG: ent:Ent638_4224 transposase Tn3 family protein; transposase Tn3 family protein 87279 10216243 Rahaq_5132 Rahnella sp. Y9602 transposase Tn3 family protein YP_004215825.1 84295 R 741091 CDS YP_004215826.1 322836449 10216244 87440..88018 1 NC_015063.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: ent:Ent638_4223 resolvase domain-containing protein; resolvase 88018 10216244 Rahaq_5133 Rahnella sp. Y9602 resolvase YP_004215826.1 87440 D 741091 CDS YP_004215827.1 322836450 10216245 88271..89086 1 NC_015063.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: kpe:KPK_B0009 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 89086 10216245 Rahaq_5134 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004215827.1 88271 D 741091 CDS YP_004215828.1 322836451 10216246 89116..89877 1 NC_015063.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: kpe:KPK_B0010 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 89877 10216246 Rahaq_5135 Rahnella sp. Y9602 short-chain dehydrogenase/reductase SDR YP_004215828.1 89116 D 741091 CDS YP_004215829.1 322836452 10216247 89920..91119 1 NC_015063.1 PFAM: major facilitator superfamily MFS_1; KEGG: kpe:KPK_B0011 transporter, major facilitator family; major facilitator superfamily protein 91119 10216247 Rahaq_5136 Rahnella sp. Y9602 major facilitator superfamily protein YP_004215829.1 89920 D 741091 CDS YP_004215830.1 322836453 10216248 91130..92065 1 NC_015063.1 KEGG: kpe:KPK_B0012 AraC family transcriptional regulator; PFAM: ThiJ/PfpI domain-containing protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 92065 10216248 Rahaq_5137 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004215830.1 91130 D 741091 CDS YP_004215831.1 322836454 10216249 complement(92097..93005) 1 NC_015063.1 KEGG: kva:Kvar_0071 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 93005 10216249 Rahaq_5138 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004215831.1 92097 R 741091 CDS YP_004215832.1 322836455 10216250 93127..93660 1 NC_015063.1 KEGG: esa:ESA_01868 hypothetical protein; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; alkylhydroperoxidase 93660 10216250 Rahaq_5139 Rahnella sp. Y9602 alkylhydroperoxidase YP_004215832.1 93127 D 741091 CDS YP_004215833.1 322836456 10216251 complement(93872..95080) 1 NC_015063.1 PFAM: major facilitator superfamily MFS_1; KEGG: kpn:KPN_01739 MFS family transporter; major facilitator superfamily protein 95080 10216251 Rahaq_5140 Rahnella sp. Y9602 major facilitator superfamily protein YP_004215833.1 93872 R 741091 CDS YP_004215834.1 322836457 10216252 95184..96101 1 NC_015063.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA3634 LysR family transcriptional regulator; LysR family transcriptional regulator 96101 10216252 Rahaq_5141 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004215834.1 95184 D 741091 CDS YP_004215835.1 322836458 10216253 complement(96300..97217) 1 NC_015063.1 KEGG: ebi:EbC_pEb10200220 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 97217 10216253 Rahaq_5142 Rahnella sp. Y9602 AraC family transcriptional regulator YP_004215835.1 96300 R 741091 CDS YP_004215836.1 322836459 10216254 97316..98383 1 NC_015063.1 PFAM: aldo/keto reductase; KEGG: ebi:EbC_pEb10200230 aldo/keto reductase family protein; aldo/keto reductase 98383 10216254 Rahaq_5143 Rahnella sp. Y9602 aldo/keto reductase YP_004215836.1 97316 D 741091 CDS YP_004215837.1 322836460 10216255 98611..99120 1 NC_015063.1 PFAM: hypothetical protein; KEGG: dda:Dd703_2507 hypothetical protein; hypothetical protein 99120 10216255 Rahaq_5144 Rahnella sp. Y9602 hypothetical protein YP_004215837.1 98611 D 741091 CDS YP_004215838.1 322836461 10216256 99224..99826 1 NC_015063.1 PFAM: integrase; KEGG: ecc:c0291 hypothetical protein; integrase 99826 10216256 Rahaq_5145 Rahnella sp. Y9602 integrase YP_004215838.1 99224 D 741091 CDS YP_004215839.1 322836462 10216257 100062..100622 1 NC_015063.1 KEGG: ent:Ent638_3521 hypothetical protein; hypothetical protein 100622 10216257 Rahaq_5146 Rahnella sp. Y9602 hypothetical protein YP_004215839.1 100062 D 741091 CDS YP_004215840.1 322836463 10216258 complement(100552..100794) 1 NC_015063.1 hypothetical protein 100794 10216258 Rahaq_5147 Rahnella sp. Y9602 hypothetical protein YP_004215840.1 100552 R 741091 CDS YP_004215841.1 322836464 10216259 101059..102132 1 NC_015063.1 KEGG: avi:Avi_0566 hypothetical protein; hypothetical protein 102132 10216259 Rahaq_5148 Rahnella sp. Y9602 hypothetical protein YP_004215841.1 101059 D 741091 CDS YP_004215842.1 322836465 10216260 102394..102846 1 NC_015063.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: ect:ECIAI39_4230 putative hexapeptide repeat acetyltransferase; transferase hexapeptide repeat containing protein 102846 10216260 Rahaq_5149 Rahnella sp. Y9602 transferase hexapeptide repeat containing protein YP_004215842.1 102394 D 741091 CDS YP_004215843.1 322836466 10216261 complement(103228..103758) 1 NC_015063.1 PFAM: GCN5-related N-acetyltransferase; KEGG: kva:Kvar_2751 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 103758 10216261 Rahaq_5150 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004215843.1 103228 R 741091 CDS YP_004215844.1 322836467 10216262 complement(103958..104860) 1 NC_015063.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebi:EbC_28550 LysR-family transcriptional regulator; LysR family transcriptional regulator 104860 10216262 Rahaq_5151 Rahnella sp. Y9602 LysR family transcriptional regulator YP_004215844.1 103958 R 741091 CDS YP_004215845.1 322836468 10216263 104951..105967 1 NC_015063.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pwa:Pecwa_2379 alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase 105967 10216263 Rahaq_5152 Rahnella sp. Y9602 alcohol dehydrogenase YP_004215845.1 104951 D 741091 CDS YP_004215846.1 322836469 10216264 106030..106332 1 NC_015063.1 KEGG: ddc:Dd586_1386 antibiotic biosynthesis monooxygenase; manually curated; PFAM: Antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 106332 10216264 Rahaq_5153 Rahnella sp. Y9602 antibiotic biosynthesis monooxygenase YP_004215846.1 106030 D 741091 CDS YP_004215847.1 322836470 10216265 complement(106520..106972) 1 NC_015063.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ebi:EbC_27920 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 106972 10216265 Rahaq_5154 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004215847.1 106520 R 741091 CDS YP_004215848.1 322836471 10216266 complement(107198..107662) 1 NC_015063.1 PFAM: NUDIX hydrolase; KEGG: ctu:Ctu_1p00160 hypothetical protein; NUDIX hydrolase 107662 10216266 Rahaq_5155 Rahnella sp. Y9602 NUDIX hydrolase YP_004215848.1 107198 R 741091 CDS YP_004215849.1 322836472 10216267 complement(107892..108722) 1 NC_015063.1 KEGG: bbt:BBta_0838 putative phenazine biosynthesis PhzC/PhzF protein; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; phenazine biosynthesis protein PhzF family protein 108722 10216267 Rahaq_5156 Rahnella sp. Y9602 phenazine biosynthesis protein PhzF family protein YP_004215849.1 107892 R 741091 CDS YP_004215850.1 322836473 10216268 complement(109432..110250) 1 NC_015063.1 KEGG: enc:ECL_A274 hypothetical protein; hypothetical protein 110250 10216268 Rahaq_5157 Rahnella sp. Y9602 hypothetical protein YP_004215850.1 109432 R 741091 CDS YP_004215851.1 322836474 10216269 complement(110371..111252) 1 NC_015063.1 KEGG: rpf:Rpic12D_5167 hypothetical protein; hypothetical protein 111252 10216269 Rahaq_5158 Rahnella sp. Y9602 hypothetical protein YP_004215851.1 110371 R 741091 CDS YP_004215852.1 322836475 10216270 111368..111814 1 NC_015063.1 KEGG: pay:PAU_02760 hypothetical protein; hypothetical protein 111814 10216270 Rahaq_5159 Rahnella sp. Y9602 hypothetical protein YP_004215852.1 111368 D 741091 CDS YP_004215853.1 322836476 10216298 complement(114127..114660) 1 NC_015063.1 KEGG: ctu:Ctu_1p00360 hypothetical protein; hypothetical protein 114660 10216298 Rahaq_5163 Rahnella sp. Y9602 hypothetical protein YP_004215853.1 114127 R 741091 CDS YP_004215854.1 322836477 10216272 complement(115084..115278) 1 NC_015063.1 KEGG: phu:Phum_PHUM040670 hypothetical protein; hypothetical protein 115278 10216272 Rahaq_5164 Rahnella sp. Y9602 hypothetical protein YP_004215854.1 115084 R 741091 CDS YP_004215855.1 322836478 10216273 complement(116114..116380) 1 NC_015063.1 manually curated; TIGRFAM: addiction module toxin, Txe/YoeB family; KEGG: cyt:cce_4261 putative addiction module toxin, Txe/YoeB; PFAM: Addiction module toxin Txe/YoeB; Txe/YoeB family addiction module toxin 116380 10216273 Rahaq_5165 Rahnella sp. Y9602 Txe/YoeB family addiction module toxin YP_004215855.1 116114 R 741091 CDS YP_004215856.1 322836479 10216274 complement(116377..116622) 1 NC_015063.1 TIGRFAM: prevent-host-death family protein; KEGG: etr:ETAE_1621 prevent-host-death protein; prevent-host-death family protein 116622 10216274 Rahaq_5166 Rahnella sp. Y9602 prevent-host-death family protein YP_004215856.1 116377 R 741091 CDS YP_004215857.1 322836480 10216275 116866..118002 1 NC_015063.1 PFAM: integrase; KEGG: pam:PANA_4063 Cre; integrase 118002 10216275 Rahaq_5167 Rahnella sp. Y9602 integrase YP_004215857.1 116866 D 741091 CDS YP_004215858.1 322836481 10216276 complement(118094..118573) 1 NC_015063.1 KEGG: eba:ebA2001 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 118573 10216276 Rahaq_5168 Rahnella sp. Y9602 N-acetyltransferase GCN5 YP_004215858.1 118094 R 741091 CDS YP_004215859.1 322836482 10216277 complement(118570..118830) 1 NC_015063.1 PFAM: hypothetical protein; KEGG: neu:NE1104 hypothetical protein; hypothetical protein 118830 10216277 Rahaq_5169 Rahnella sp. Y9602 hypothetical protein YP_004215859.1 118570 R 741091 CDS YP_004215860.1 322836483 10216299 complement(119724..120332) 1 NC_015063.1 PFAM: abortive infection protein; KEGG: cko:CKO_01599 hypothetical protein; abortive infection protein 120332 10216299 Rahaq_5171 Rahnella sp. Y9602 abortive infection protein YP_004215860.1 119724 R 741091 CDS YP_004215861.1 322836484 10216300 complement(122223..123995) 1 NC_015063.1 KEGG: kpe:KPK_3392 cyclic diguanylate phosphodiesterase (EAL) domain protein; PFAM: EAL domain protein; GAF domain protein; SMART: EAL domain protein; GAF domain protein; diguanylate phosphodiesterase 123995 10216300 Rahaq_5173 Rahnella sp. Y9602 diguanylate phosphodiesterase YP_004215861.1 122223 R 741091 CDS YP_004215862.1 322836485 10216280 124411..124848 1 NC_015063.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pam:PANA_1601 YaeR; glyoxalase/bleomycin resistance protein/dioxygenase 124848 10216280 Rahaq_5174 Rahnella sp. Y9602 glyoxalase/bleomycin resistance protein/dioxygenase YP_004215862.1 124411 D 741091 CDS YP_004215863.1 322836486 10216281 complement(125367..125897) 1 NC_015063.1 KEGG: ctu:Ctu_1p00360 hypothetical protein; hypothetical protein 125897 10216281 Rahaq_5175 Rahnella sp. Y9602 hypothetical protein YP_004215863.1 125367 R 741091 CDS YP_004215864.1 322836487 10216303 complement(126949..127359) 1 NC_015063.1 PFAM: hypothetical protein; KEGG: bcm:Bcenmc03_6724 hypothetical protein; hypothetical protein 127359 10216303 Rahaq_5179 Rahnella sp. Y9602 hypothetical protein YP_004215864.1 126949 R 741091 CDS YP_004215865.1 322836488 10216283 complement(127388..128608) 1 NC_015063.1 PFAM: major facilitator superfamily MFS_1; KEGG: rle:pRL80047 major facilitator transporter; major facilitator superfamily protein 128608 10216283 Rahaq_5180 Rahnella sp. Y9602 major facilitator superfamily protein YP_004215865.1 127388 R 741091 CDS YP_004215866.1 322836489 10216284 128714..129406 1 NC_015063.1 PFAM: regulatory protein TetR; KEGG: rle:pRL80046 TetR family transcriptional regulatory protein; TetR family transcriptional regulator 129406 10216284 Rahaq_5181 Rahnella sp. Y9602 TetR family transcriptional regulator YP_004215866.1 128714 D 741091 CDS YP_004215867.1 322836490 10216285 129442..129831 1 NC_015063.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: bur:Bcep18194_C7514 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 129831 10216285 Rahaq_5182 Rahnella sp. Y9602 4-oxalocrotonate tautomerase YP_004215867.1 129442 D 741091 CDS YP_004215868.1 322836491 10216286 129882..130178 1 NC_015063.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: ngk:NGK_0275 hypothetical protein; antibiotic biosynthesis monooxygenase 130178 10216286 Rahaq_5183 Rahnella sp. Y9602 antibiotic biosynthesis monooxygenase YP_004215868.1 129882 D 741091 CDS YP_004215869.1 322836492 10216287 complement(130233..131126) 1 NC_015063.1 PFAM: metallophosphoesterase; KEGG: bbt:BBta_1036 putative serine/threonine protein phosphatase; metallophosphoesterase 131126 10216287 Rahaq_5184 Rahnella sp. Y9602 metallophosphoesterase YP_004215869.1 130233 R 741091 CDS YP_004215870.1 322836493 10216288 complement(131123..132652) 1 NC_015063.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: dfe:Dfer_5338 type I phosphodiesterase/nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase 132652 10216288 Rahaq_5185 Rahnella sp. Y9602 type I phosphodiesterase/nucleotide pyrophosphatase YP_004215870.1 131123 R 741091 CDS YP_004215871.1 322836494 10216289 complement(132642..133457) 1 NC_015063.1 KEGG: mlo:mlr5891 transcription regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator 133457 10216289 Rahaq_5186 Rahnella sp. Y9602 DeoR family transcriptional regulator YP_004215871.1 132642 R 741091 CDS